RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CD226 (Homo sapiens)

Ensembl gene IDs: ENSG00000150637

Ensembl transcript IDs: ENST00000280200.8, ENST00000577287.5, ENST00000578928.1, ENST00000579496.5, ENST00000580335.1, ENST00000581982.5, ENST00000582621.6, ENST00000583955.5

Found 631 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCCCTGTGTTCTAGGGAGGGTATCGAAGCCCAAATTGTTGCTTTCTaGAGGAAACGAGTGTTTCCTGCCTCGTTTCCCACTGGAGTTGCC +
Preference number: 1 (lower is better)
Translates to: ALCSREGIEAQIVAF*RKRVFPASFPTGVA
Trigger: GGCAACTCCAGTGGGAAACGAGGCAGGAAACACTCGTTTCCTGCAGAAAGCAACAATTTGGGCTTCGATACCCTCCCTAGAACACAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR GCA 90 bp TTTCTGCAGGAAACGAGTGTTTCCTGCCTCGTTTCCCACTGGAGTTaGCACATGTTGTGTTTTGCAAGCCTACTCCATCGGGTGTCCTGG +
Preference number: 1 (lower is better)
Translates to: FLQETSVSCLVSHWS*HMLCFASLLHRVSW
Trigger: CCAGGACACCCGATGGAGTAGGCTTGCAAAACACAACATGTGGCAACTCCAGTGGGAAACGAGGCAGGAAACACTCGTTTCCTGCAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR CCA 90 bp CACAAGAGGAAAGCCTGCATGAGAGTGAGGCCAAGACCAGGGAAATaGATCCAACACTCTGGAAAGGGATTCAGAAGCCAGTTTATGCCC +
Preference number: 1 (lower is better)
Translates to: HKRKACMRVRPRPGK*IQHSGKGFRSQFMP
Trigger: GGGCATAAACTGGCTTCTGAATCCCTTTCCAGAGTGTTGGATCCATTTCCCTGGTCTTGGCCTCACTCTCATGCAGGCTTTCCTCTTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
3UTR CCA 90 bp TGTTGCTTTCTGCAGGAAACGAGTGTTTCCTGCCTCGTTTCCCACTaGAGTTGCCACATGTTGTGTTTTGCAAGCCTACTCCATCGGGTG +
Preference number: 1 (lower is better)
Translates to: CCFLQETSVSCLVSH*SCHMLCFASLLHRV
Trigger: CACCCGATGGAGTAGGCTTGCAAAACACAACATGTGGCAACTCCAGTGGGAAACGAGGCAGGAAACACTCGTTTCCTGCAGAAAGCAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR TCA 90 bp GAAAGGACTCTGCCAAGCACAATTCCCAAACCTCATCCCAGCCCCTaGAGTCTCCCTGTCCCACTTAAGGAAAGAGGGAAAATAACAGTC +
Preference number: 1 (lower is better)
Translates to: ERTLPSTIPKPHPSP*SLPVPLKERGKITV
Trigger: GACTGTTATTTTCCCTCTTTCCTTAAGTGGGACAGGGAGACTTCAGGGGCTGGGATGAGGTTTGGGAATTGTGCTTGGCAGAGTCCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR CCA 90 bp CTTTATATGGTAAGTTGGGTGAATTGCTGGCATCTGTTTGTGGACTaGTGTGAGCAAGAAACCCATGGGGGCTGTGCTCTTGAGGCACTC +
Preference number: 1 (lower is better)
Translates to: LYMVSWVNCWHLFVD*CEQETHGGCALEAL
Trigger: GAGTGCCTCAAGAGCACAGCCCCCATGGGTTTCTTGCTCACACCAGTCCACAAACAGATGCCAGCAATTCACCCAACTTACCATATAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR CCA 90 bp AAGTTCTTCAACGAGCCTGGAGGGAATGTCGCAGTGTGTTCTGTTTaGAAAGTAAGTTGTACCCTGACTGCCACTATGGAAGCTGAAGGG +
Preference number: 1 (lower is better)
Translates to: KFFNEPGGNVAVCSV*KVSCTLTATMEAEG
Trigger: CCCTTCAGCTTCCATAGTGGCAGTCAGGGTACAACTTACTTTCCAAACAGAACACACTGCGACATTCCCTCCAGGCTCGTTGAAGAACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR TCA 90 bp AACTCTCCAGCTTTGAGACTCCCCTTTCCTCTTCTAACCATGCTCTaGATTGCCCAGTATTGTGCTTTGACCCTGCTTCTCAGCTCTAGA +
Preference number: 1 (lower is better)
Translates to: NSPALRLPFPLLTML*IAQYCALTLLLSSR
Trigger: TCTAGAGCTGAGAAGCAGGGTCAAAGCACAATACTGGGCAATTCAGAGCATGGTTAGAAGAGGAAAGGGGAGTCTCAAAGCTGGAGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
3UTR GCA 90 bp TATCGAAGCCCAAATTGTTGCTTTCTGCAGGAAACGAGTGTTTCCTaGCTCGTTTCCCACTGGAGTTGCCACATGTTGTGTTTTGCAAGC +
Preference number: 1 (lower is better)
Translates to: YRSPNCCFLQETSVS*LVSHWSCHMLCFAS
Trigger: GCTTGCAAAACACAACATGTGGCAACTCCAGTGGGAAACGAGGCAGGAAACACTCGTTTCCTGCAGAAAGCAACAATTTGGGCTTCGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR CCA 90 bp CTGGTCGAGGAGGGACATTTGTCAGTTGAAGTTCTTCAACGAGCCTaGAGGGAATGTCGCAGTGTGTTCTGTTTGGAAAGTAAGTTGTAC +
Preference number: 1 (lower is better)
Translates to: LVEEGHLSVEVLQRA*RECRSVFCLESKLY
Trigger: GTACAACTTACTTTCCAAACAGAACACACTGCGACATTCCCTCCAGGCTCGTTGAAGAACTTCAACTGACAAATGTCCCTCCTCGACCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR TCA 90 bp CCTTTAAGAAAACTATCATCTGGTCGAGGAGGGACATTTGTCAGTTaGAGTTCTTCAACGAGCCTGGAGGGAATGTCGCAGTGTGTTCTG +
Preference number: 1 (lower is better)
Translates to: PLRKLSSGRGGTFVS*SSSTSLEGMSQCVL
Trigger: CAGAACACACTGCGACATTCCCTCCAGGCTCGTTGAAGAACTTCAACTGACAAATGTCCCTCCTCGACCAGATGATAGTTTTCTTAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR TCA 90 bp GCTCTGGCAACAGATAGAGAGGGACATCCATTGAGAAATAAGCCATaGACCTTCTTGGTAACAAAGATGGAAAGGACTCTGCCAAGCACA +
Preference number: 1 (lower is better)
Translates to: ALATDREGHPLRNKP*TFLVTKMERTLPST
Trigger: TGTGCTTGGCAGAGTCCTTTCCATCTTTGTTACCAAGAAGGTTCATGGCTTATTTCTCAATGGATGTCCCTCTCTATCTGTTGCCAGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR GCA 90 bp TCGACTTCTGCCTTTAGTGTCATCATGTTAAGGCATGGAAGATGTTaGTGCCATGCTTATAACAAGACAAAGCTGGAAAGTTGGAAAGCT +
Preference number: 1 (lower is better)
Translates to: STSAFSVIMLRHGRC*CHAYNKTKLESWKA
Trigger: AGCTTTCCAACTTTCCAGCTTTGTCTTGTTATAAGCATGGCAGCAACATCTTCCATGCCTTAACATGATGACACTAAAGGCAGAAGTCGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR CCA 90 bp GCAAAGGTTGGCAGTGATTCCACTAGGTCCTGGGCTTTTCTTTGGTaGAAGACTTTTATTACTCCTTCAATCTCATTATTCATTATGGCC +
Preference number: 1 (lower is better)
Translates to: AKVGSDSTRSWAFLW*KTFITPSISLFIMA
Trigger: GGCCATAATGAATAATGAGATTGAAGGAGTAATAAAAGTCTTCCACCAAAGAAAAGCCCAGGACCTAGTGGAATCACTGCCAACCTTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578928.1
3UTR GCA 90 bp TGCCCTCTCGCATTTATCTTCCTCTTGAATATTCATTTCTTCTACTaGCAGGTATTCTTCTGGACTATGCTGATAGAGTGGATTCTAGAA +
Preference number: 1 (lower is better)
Translates to: CPLAFIFLLNIHFFY*QVFFWTMLIEWILE
Trigger: TTCTAGAATCCACTCTATCAGCATAGTCCAGAAGAATACCTGGCAGTAGAAGAAATGAATATTCAAGAGGAAGATAAATGCGAGAGGGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
3UTR TCA 90 bp CCTTTTCAGGAATTTGGAGAACTTATGCTTGGTATTTTAAACTCATaGGAACTTAGTCTAGAAAGGGCCTCCACTTATTTGACCACAGGT +
Preference number: 1 (lower is better)
Translates to: PFQEFGELMLGILNS*ELSLERASTYLTTG
Trigger: ACCTGTGGTCAAATAAGTGGAGGCCCTTTCTAGACTAAGTTCTCATGAGTTTAAAATACCAAGCATAAGTTCTCCAAATTCCTGAAAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR CCA 90 bp ATCCAAAGCTGTTACTCAGAAAACTTAGTATCACTGAGAGTATATTaGAGAGCTCAAAGTCTTACTCAGGCAGCTGATCAAAGAATAATG +
Preference number: 1 (lower is better)
Translates to: IQSCYSENLVSLRVY*RAQSLTQAADQRIM
Trigger: CATTATTCTTTGATCAGCTGCCTGAGTAAGACTTTGAGCTCTCCAATATACTCTCAGTGATACTAAGTTTTCTGAGTAACAGCTTTGGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR TCA 90 bp GCTTATAACAAGACAAAGCTGGAAAGTTGGAAAGCTGAAAATCAATaGCTTTTCTTATTAGACCTATTAGAGAACCAAGGTCCTGAGCAA +
Preference number: 1 (lower is better)
Translates to: AYNKTKLESWKAENQ*LFLLDLLENQGPEQ
Trigger: TTGCTCAGGACCTTGGTTCTCTAATAGGTCTAATAAGAAAAGTCATTGATTTTCAGCTTTCCAACTTTCCAGCTTTGTCTTGTTATAAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR-3UTR CCA 90 bp CTCTGCCAAGCACAATTCCCAAACCTCATCCCAGCCCCTGAAGTCTCCCTGTCCCTCCATCGGGTGTCCTaGGAATTCTATGAGCCACCC +
Preference number: 2 (lower is better)
Translates to: LCQAQFPNLIPAPEVSLSLHRVS*EFYEPP
Trigger: GGGTGGCTCATAGAATTCCCAGGACACCCGATGGAG...GGACAGGGAGACTTCAGGGGCTGGGATGAGGTTTGGGAATTGTGCTTGGCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR-3UTR CCA 90 bp CTCTGCCAAGCACAATTCCCAAACCTCATCCCAGCCCCTGAAGTCTCCCTGTCCGGACTCATCCGAACGTaGGGTACTGATGCTGCTCAG +
Preference number: 2 (lower is better)
Translates to: LCQAQFPNLIPAPEVSLSGLIRT*GTDAAQ
Trigger: CTGAGCAGCATCAGTACCCCACGTTCGGATGAGTCC...GGACAGGGAGACTTCAGGGGCTGGGATGAGGTTTGGGAATTGTGCTTGGCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR-3UTR CCA 90 bp CTCTGCCAAGCACAATTCCCAAACCTCATCCCAGCCCCTGAAGTCTCCCTGTCCTCCTCCCCCTTTTTCTaGATGAAGGGAGACACCAGG +
Preference number: 2 (lower is better)
Translates to: LCQAQFPNLIPAPEVSLSSSPFF*MKGDTR
Trigger: CCTGGTGTCTCCCTTCATCCAGAAAAAGGGGGAGGA...GGACAGGGAGACTTCAGGGGCTGGGATGAGGTTTGGGAATTGTGCTTGGCAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR-3UTR TCA 90 bp CTCTGCCAAGCACAATTCCCAAACCTCATCCCAGCCCCTGAAGTCTCCCTGTCCGGGCCTCCACTTATTTaGCCACAGGTAGAAGATTGG +
Preference number: 2 (lower is better)
Translates to: LCQAQFPNLIPAPEVSLSGPPLI*PQVEDW
Trigger: CCAATCTTCTACCTGTGGTCAAATAAGTGGAGGCCC...GGACAGGGAGACTTCAGGGGCTGGGATGAGGTTTGGGAATTGTGCTTGGCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR-3UTR GCA 90 bp CTCTGCCAAGCACAATTCCCAAACCTCATCCCAGCCCCTGAAGTCTCCCTGTCCCCACATGTTGTGTTTTaGAAGCCTACTCCATCGGGT +
Preference number: 2 (lower is better)
Translates to: LCQAQFPNLIPAPEVSLSPHVVF*KPTPSG
Trigger: ACCCGATGGAGTAGGCTTGCAAAACACAACATGTGG...GGACAGGGAGACTTCAGGGGCTGGGATGAGGTTTGGGAATTGTGCTTGGCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR CAA 90 bp GTGTTTCCTGCCTCGTTTCCCACTGGAGTTGCCACATGTTGTGTTTaGCAAGCCTACTCCATCGGGTGTCCTGGGAATTCTATGAGCCAC +
Preference number: 2 (lower is better)
Translates to: VFPASFPTGVATCCV*QAYSIGCPGNSMSH
Trigger: GTGGCTCATAGAATTCCCAGGACACCCGATGGAGTAGGCTTGCAAAACACAACATGTGGCAACTCCAGTGGGAAACGAGGCAGGAAACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR CAA 90 bp CTTTCTGCAGGAAACGAGTGTTTCCTGCCTCGTTTCCCACTGGAGTaGCCACATGTTGTGTTTTGCAAGCCTACTCCATCGGGTGTCCTG +
Preference number: 2 (lower is better)
Translates to: LSAGNECFLPRFPLE*PHVVFCKPTPSGVL
Trigger: CAGGACACCCGATGGAGTAGGCTTGCAAAACACAACATGTGGCAACTCCAGTGGGAAACGAGGCAGGAAACACTCGTTTCCTGCAGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR-3UTR GCA 90 bp CTCTGCCAAGCACAATTCCCAAACCTCATCCCAGCCCCTGAAGTCTCCCTGTCCCGAAGCCCAAATTGTTaGTTTCTGCAGGAAACGAGT +
Preference number: 2 (lower is better)
Translates to: LCQAQFPNLIPAPEVSLSRSPNC*FLQETS
Trigger: ACTCGTTTCCTGCAGAAAGCAACAATTTGGGCTTCG...GGACAGGGAGACTTCAGGGGCTGGGATGAGGTTTGGGAATTGTGCTTGGCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR CAA 90 bp GATTCACTGCCCTGTGTTCTAGGGAGGGTATCGAAGCCCAAATTGTaGCTTTCTGCAGGAAACGAGTGTTTCCTGCCTCGTTTCCCACTG +
Preference number: 2 (lower is better)
Translates to: DSLPCVLGRVSKPKL*LSAGNECFLPRFPL
Trigger: CAGTGGGAAACGAGGCAGGAAACACTCGTTTCCTGCAGAAAGCAACAATTTGGGCTTCGATACCCTCCCTAGAACACAGGGCAGTGAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR-3UTR TCA 90 bp CTCTGCCAAGCACAATTCCCAAACCTCATCCCAGCCCCTGAAGTCTCCCTGTCCATAAATCAGCTCAACTaGAGCCACATCCAAAGCTGT +
Preference number: 2 (lower is better)
Translates to: LCQAQFPNLIPAPEVSLSINQLN*SHIQSC
Trigger: ACAGCTTTGGATGTGGCTTCAGTTGAGCTGATTTAT...GGACAGGGAGACTTCAGGGGCTGGGATGAGGTTTGGGAATTGTGCTTGGCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR-3UTR GCA 90 bp CTCTGCCAAGCACAATTCCCAAACCTCATCCCAGCCCCTGAAGTCTCCCTGTCCGAGGCTTTGCAATACTaGAGTGGTTTGCTACAAAAG +
Preference number: 2 (lower is better)
Translates to: LCQAQFPNLIPAPEVSLSEALQY*SGLLQK
Trigger: CTTTTGTAGCAAACCACTGCAGTATTGCAAAGCCTC...GGACAGGGAGACTTCAGGGGCTGGGATGAGGTTTGGGAATTGTGCTTGGCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR-3UTR CCA 90 bp CTCTGCCAAGCACAATTCCCAAACCTCATCCCAGCCCCTGAAGTCTCCCTGTCCGCAGTGTGTTCTGTTTaGAAAGTAAGTTGTACCCTG +
Preference number: 2 (lower is better)
Translates to: LCQAQFPNLIPAPEVSLSAVCSV*KVSCTL
Trigger: CAGGGTACAACTTACTTTCCAAACAGAACACACTGC...GGACAGGGAGACTTCAGGGGCTGGGATGAGGTTTGGGAATTGTGCTTGGCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR CAA 90 bp GAAACGAGTGTTTCCTGCCTCGTTTCCCACTGGAGTTGCCACATGTaGTGTTTTGCAAGCCTACTCCATCGGGTGTCCTGGGAATTCTAT +
Preference number: 2 (lower is better)
Translates to: ETSVSCLVSHWSCHM*CFASLLHRVSWEFY
Trigger: ATAGAATTCCCAGGACACCCGATGGAGTAGGCTTGCAAAACACAACATGTGGCAACTCCAGTGGGAAACGAGGCAGGAAACACTCGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR CAA 90 bp TCAGATTCACTGCCCTGTGTTCTAGGGAGGGTATCGAAGCCCAAATaGTTGCTTTCTGCAGGAAACGAGTGTTTCCTGCCTCGTTTCCCA +
Preference number: 2 (lower is better)
Translates to: SDSLPCVLGRVSKPK*LLSAGNECFLPRFP
Trigger: TGGGAAACGAGGCAGGAAACACTCGTTTCCTGCAGAAAGCAACAATTTGGGCTTCGATACCCTCCCTAGAACACAGGGCAGTGAATCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR CAA 90 bp AACAATCCTGTCTTTCTGGTGAGCGTTTCCTTGTTGCTGACAATGTaGCTCCCTGTGGCCATCCATCTGAGCTACGTGAGGAGGATTCCA +
Preference number: 2 (lower is better)
Translates to: NNPVFLVSVSLLLTM*LPVAIHLSYVRRIP
Trigger: TGGAATCCTCCTCACGTAGCTCAGATGGATGGCCACAGGGAGCAACATTGTCAGCAACAAGGAAACGCTCACCAGAAAGACAGGATTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578928.1
3UTR CAA 90 bp ACACTAACAGCGAACAATCCTGTCTTTCTGGTGAGCGTTTCCTTGTaGCTGACAATGTTGCTCCCTGTGGCCATCCATCTGAGCTACGTG +
Preference number: 2 (lower is better)
Translates to: TLTANNPVFLVSVSL*LTMLLPVAIHLSYV
Trigger: CACGTAGCTCAGATGGATGGCCACAGGGAGCAACATTGTCAGCAACAAGGAAACGCTCACCAGAAAGACAGGATTGTTCGCTGTTAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578928.1
3UTR-3UTR TCA 90 bp TCTGCCTTTAGTGTCATCATGTTAAGGCATGGAAGATGTTGCTGCCATGCTTATCCTCATCCCAGCCCCTaGAGTCTCCCTGTCCCACTT +
Preference number: 2 (lower is better)
Translates to: SAFSVIMLRHGRCCCHAYPHPSP*SLPVPL
Trigger: AAGTGGGACAGGGAGACTTCAGGGGCTGGGATGAGG...ATAAGCATGGCAGCAACATCTTCCATGCCTTAACATGATGACACTAAAGGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR-3UTR GCA 90 bp GGCCAAGACCAGGGAAATGGATCCAACACTCTGGAAAGGGATTCAGAAGCCAGTCTGGTAAATAGCCCTTaGCCAAAGCTTAATCTCCCC +
Preference number: 2 (lower is better)
Translates to: GQDQGNGSNTLERDSEASLVNSP*PKLNLP
Trigger: GGGGAGATTAAGCTTTGGGCAAGGGCTATTTACCAG...ACTGGCTTCTGAATCCCTTTCCAGAGTGTTGGATCCATTTCCCTGGTCTTGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
3UTR-3UTR GCA 90 bp TCTGCCTTTAGTGTCATCATGTTAAGGCATGGAAGATGTTGCTGCCATGCTTATGGTGAGCCGAGATTGTaGCATTGCACTCCAGCCCGG +
Preference number: 2 (lower is better)
Translates to: SAFSVIMLRHGRCCCHAYGEPRL*HCTPAR
Trigger: CCGGGCTGGAGTGCAATGGCACAATCTCGGCTCACC...ATAAGCATGGCAGCAACATCTTCCATGCCTTAACATGATGACACTAAAGGCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR-3UTR GCA 90 bp CTCTGCCAAGCACAATTCCCAAACCTCATCCCAGCCCCTGAAGTCTCCCTGTCCGGAGATACAAGCTGCTaGCTTCCAGATATATTTAAG +
Preference number: 2 (lower is better)
Translates to: LCQAQFPNLIPAPEVSLSGDTSC*LPDIFK
Trigger: CTTAAATATATCTGGAAGGCAGCAGCTTGTATCTCC...GGACAGGGAGACTTCAGGGGCTGGGATGAGGTTTGGGAATTGTGCTTGGCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR-3UTR GCA 90 bp TCTGCCTTTAGTGTCATCATGTTAAGGCATGGAAGATGTTGCTGCCATGCTTATGGGACTACAGGTGCGTaGCACCAGGCCTGGCTAATT +
Preference number: 2 (lower is better)
Translates to: SAFSVIMLRHGRCCCHAYGTTGA*HQAWLI
Trigger: AATTAGCCAGGCCTGGTGGCACGCACCTGTAGTCCC...ATAAGCATGGCAGCAACATCTTCCATGCCTTAACATGATGACACTAAAGGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR-3UTR CCA 90 bp CTCTGCCAAGCACAATTCCCAAACCTCATCCCAGCCCCTGAAGTCTCCCTGTCCCACTGTAAGTACTTTTaGATACCTGGCATAAAGGAT +
Preference number: 2 (lower is better)
Translates to: LCQAQFPNLIPAPEVSLSHCKYF*IPGIKD
Trigger: ATCCTTTATGCCAGGTATCCAAAAGTACTTACAGTG...GGACAGGGAGACTTCAGGGGCTGGGATGAGGTTTGGGAATTGTGCTTGGCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR CAA 90 bp TATACACTAACAGCGAACAATCCTGTCTTTCTGGTGAGCGTTTCCTaGTTGCTGACAATGTTGCTCCCTGTGGCCATCCATCTGAGCTAC +
Preference number: 2 (lower is better)
Translates to: YTLTANNPVFLVSVS*LLTMLLPVAIHLSY
Trigger: GTAGCTCAGATGGATGGCCACAGGGAGCAACATTGTCAGCAACAAGGAAACGCTCACCAGAAAGACAGGATTGTTCGCTGTTAGTGTATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578928.1
3UTR-3UTR GCA 90 bp TTCCCTCCCAAATTTCTACCCTACCGTCCTATGCCACCACTTTCAACTGTCACTCTGGTAAATAGCCCTTaGCCAAAGCTTAATCTCCCC +
Preference number: 2 (lower is better)
Translates to: FPPKFLPYRPMPPLSTVTLVNSP*PKLNLP
Trigger: GGGGAGATTAAGCTTTGGGCAAGGGCTATTTACCAG...AGTGACAGTTGAAAGTGGTGGCATAGGACGGTAGGGTAGAAATTTGGGAGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
3UTR-3UTR CCA 90 bp CTCTGCCAAGCACAATTCCCAAACCTCATCCCAGCCCCTGAAGTCTCCCTGTCCCAAACCAATATAACTTaGATGTTCACAATCCACGAA +
Preference number: 2 (lower is better)
Translates to: LCQAQFPNLIPAPEVSLSQTNIT*MFTIHE
Trigger: TTCGTGGATTGTGAACATCCAAGTTATATTGGTTTG...GGACAGGGAGACTTCAGGGGCTGGGATGAGGTTTGGGAATTGTGCTTGGCAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR CAA 90 bp GCCTTTAAGAAAACTATCATCTGGTCGAGGAGGGACATTTGTCAGTaGAAGTTCTTCAACGAGCCTGGAGGGAATGTCGCAGTGTGTTCT +
Preference number: 2 (lower is better)
Translates to: AFKKTIIWSRRDICQ*KFFNEPGGNVAVCS
Trigger: AGAACACACTGCGACATTCCCTCCAGGCTCGTTGAAGAACTTCAACTGACAAATGTCCCTCCTCGACCAGATGATAGTTTTCTTAAAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR-3UTR TCA 90 bp TCTGCCTTTAGTGTCATCATGTTAAGGCATGGAAGATGTTGCTGCCATGCTTATAGAGAACCAAGGTCCTaGGCAAACTGCCACCCCAAA +
Preference number: 2 (lower is better)
Translates to: SAFSVIMLRHGRCCCHAYREPRS*ANCHPK
Trigger: TTTGGGGTGGCAGTTTGCTCAGGACCTTGGTTCTCT...ATAAGCATGGCAGCAACATCTTCCATGCCTTAACATGATGACACTAAAGGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR-3UTR TCA 90 bp CCACTAGGTCCTGGGCTTTTCTTTGGTGGAAGACTTTTATTACTCCTTCAATCTGAGGAGGATTCCATGTaGACGCCGATCAGCTTCCAT +
Preference number: 2 (lower is better)
Translates to: PLGPGLFFGGRLLLLLQSEEDSM*TPISFH
Trigger: ATGGAAGCTGATCGGCGTTCACATGGAATCCTCCTC...AGATTGAAGGAGTAATAAAAGTCTTCCACCAAAGAAAAGCCCAGGACCTAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578928.1
3UTR-3UTR TCA 90 bp GTGATTCCACTAGGTCCTGGGCTTTTCTTTGGTGGAAGACTTTTATTACTCCTTGCGTTTCCTTGTTGCTaGCAATGTTGCTCCCTGTGG +
Preference number: 2 (lower is better)
Translates to: VIPLGPGLFFGGRLLLLLAFPCC*QCCSLW
Trigger: CCACAGGGAGCAACATTGTCAGCAACAAGGAAACGC...AAGGAGTAATAAAAGTCTTCCACCAAAGAAAAGCCCAGGACCTAGTGGAATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578928.1
3UTR-3UTR GCA 90 bp CTACTACATTTGCTCCTAAGGCTAGACCTGGGATGGCGGCAAGAATTCTATACACTGGTAAATAGCCCTTaGCCAAAGCTTAATCTCCCC +
Preference number: 2 (lower is better)
Translates to: LLHLLLRLDLGWRQEFYTLVNSP*PKLNLP
Trigger: GGGGAGATTAAGCTTTGGGCAAGGGCTATTTACCAG...TGTATAGAATTCTTGCCGCCATCCCAGGTCTAGCCTTAGGAGCAAATGTAGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
3UTR-3UTR TCA 90 bp AATCAGAATCATAGGTGCAAAAGAGTAGAGGGGGAGAAACATACACTAGGGAGACACAAGCATTACCCCTaGGGGTATAACAGGAGCATC +
Preference number: 2 (lower is better)
Translates to: NQNHRCKRVEGEKHTLGRHKHYP*GYNRSI
Trigger: GATGCTCCTGTTATACCCTCAGGGGTAATGCTTGTG...TCTCCCTAGTGTATGTTTCTCCCCCTCTACTCTTTTGCACCTATGATTCTGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR-3UTR GCA 90 bp TCTGCCTTTAGTGTCATCATGTTAAGGCATGGAAGATGTTGCTGCCATGCTTATCACAAGAGGAAAGCCTaGATGAGAGTGAGGCCAAGA +
Preference number: 2 (lower is better)
Translates to: SAFSVIMLRHGRCCCHAYHKRKA*MRVRPR
Trigger: TCTTGGCCTCACTCTCATGCAGGCTTTCCTCTTGTG...ATAAGCATGGCAGCAACATCTTCCATGCCTTAACATGATGACACTAAAGGCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR-3UTR GCA 90 bp CTACTACATTTGCTCCTAAGGCTAGACCTGGGATGGCGGCAAGAATTCTATACAAATTGCCCAGTATTGTaGTTTGACCCTGCTTCTCAG +
Preference number: 2 (lower is better)
Translates to: LLHLLLRLDLGWRQEFYTNCPVL*FDPASQ
Trigger: CTGAGAAGCAGGGTCAAAGCACAATACTGGGCAATT...TGTATAGAATTCTTGCCGCCATCCCAGGTCTAGCCTTAGGAGCAAATGTAGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
3UTR-3UTR CCA 90 bp CTACTACATTTGCTCCTAAGGCTAGACCTGGGATGGCGGCAAGAATTCTATACATGCCAGGTATTCTTCTaGACTATGCTGATAGAGTGG +
Preference number: 2 (lower is better)
Translates to: LLHLLLRLDLGWRQEFYTCQVFF*TMLIEW
Trigger: CCACTCTATCAGCATAGTCCAGAAGAATACCTGGCA...TGTATAGAATTCTTGCCGCCATCCCAGGTCTAGCCTTAGGAGCAAATGTAGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
3UTR CAA 90 bp TTTGAGAAGCAAACTCTCTACCAGACAGAAACAAGGATGTATGAATaGCCAAGAGTTGGCAGCCATCTTGCCAACACAAGAGGAAAGCCT +
Preference number: 2 (lower is better)
Translates to: FEKQTLYQTETRMYE*PRVGSHLANTRGKP
Trigger: AGGCTTTCCTCTTGTGTTGGCAAGATGGCTGCCAACTCTTGGCAATTCATACATCCTTGTTTCTGTCTGGTAGAGAGTTTGCTTCTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
3UTR-3UTR TCA 90 bp CCCAAATTTCTACCCTACCGTCCTATGCCACCACTTTCAACTGTCACTTTTAGTCTTCTAACCATGCTCTaGATTGCCCAGTATTGTGCT +
Preference number: 2 (lower is better)
Translates to: PKFLPYRPMPPLSTVTFSLLTML*IAQYCA
Trigger: AGCACAATACTGGGCAATTCAGAGCATGGTTAGAAG...ACTAAAAGTGACAGTTGAAAGTGGTGGCATAGGACGGTAGGGTAGAAATTTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
3UTR-3UTR TCA 90 bp CTCAGAAAACTTAGTATCACTGAGAGTATATTGGAGAGCTCAAAGTCTTACTCACCGAACGTGGGGTACTaGTGCTGCTCAGATTCACTG +
Preference number: 2 (lower is better)
Translates to: LRKLSITESILESSKSYSPNVGY*CCSDSL
Trigger: CAGTGAATCTGAGCAGCATCAGTACCCCACGTTCGG...TGAGTAAGACTTTGAGCTCTCCAATATACTCTCAGTGATACTAAGTTTTCTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR-3UTR GCA 90 bp CCCAAATTTCTACCCTACCGTCCTATGCCACCACTTTCAACTGTCACTTTTAGTAATTGCCCAGTATTGTaGTTTGACCCTGCTTCTCAG +
Preference number: 2 (lower is better)
Translates to: PKFLPYRPMPPLSTVTFSNCPVL*FDPASQ
Trigger: CTGAGAAGCAGGGTCAAAGCACAATACTGGGCAATT...ACTAAAAGTGACAGTTGAAAGTGGTGGCATAGGACGGTAGGGTAGAAATTTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
3UTR-3UTR GCA 90 bp TCTGCCTTTAGTGTCATCATGTTAAGGCATGGAAGATGTTGCTGCCATGCTTATCCACATGTTGTGTTTTaGAAGCCTACTCCATCGGGT +
Preference number: 2 (lower is better)
Translates to: SAFSVIMLRHGRCCCHAYPHVVF*KPTPSG
Trigger: ACCCGATGGAGTAGGCTTGCAAAACACAACATGTGG...ATAAGCATGGCAGCAACATCTTCCATGCCTTAACATGATGACACTAAAGGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR-3UTR TCA 90 bp TCTGCCTTTAGTGTCATCATGTTAAGGCATGGAAGATGTTGCTGCCATGCTTATCTTCTAACCATGCTCTaGATTGCCCAGTATTGTGCT +
Preference number: 2 (lower is better)
Translates to: SAFSVIMLRHGRCCCHAYLLTML*IAQYCA
Trigger: AGCACAATACTGGGCAATTCAGAGCATGGTTAGAAG...ATAAGCATGGCAGCAACATCTTCCATGCCTTAACATGATGACACTAAAGGCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR-3UTR TCA 90 bp CTCAGAAAACTTAGTATCACTGAGAGTATATTGGAGAGCTCAAAGTCTTACTCATGCCACTATGGAAGCTaGAGGGGGAGATACAAGCTG +
Preference number: 2 (lower is better)
Translates to: LRKLSITESILESSKSYSCHYGS*RGRYKL
Trigger: CAGCTTGTATCTCCCCCTTCAGCTTCCATAGTGGCA...TGAGTAAGACTTTGAGCTCTCCAATATACTCTCAGTGATACTAAGTTTTCTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR-3UTR GCA 90 bp CCCAAATTTCTACCCTACCGTCCTATGCCACCACTTTCAACTGTCACTTTTAGTAACCATGCTCTGAATTaGCCAGTATTGTGCTTTGAC +
Preference number: 2 (lower is better)
Translates to: PKFLPYRPMPPLSTVTFSNHALN*PVLCFD
Trigger: GTCAAAGCACAATACTGGGCAATTCAGAGCATGGTT...ACTAAAAGTGACAGTTGAAAGTGGTGGCATAGGACGGTAGGGTAGAAATTTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
3UTR-3UTR GCA 90 bp TCTGCCTTTAGTGTCATCATGTTAAGGCATGGAAGATGTTGCTGCCATGCTTATGTAAGTTGGGTGAATTaGTGGCATCTGTTTGTGGAC +
Preference number: 2 (lower is better)
Translates to: SAFSVIMLRHGRCCCHAYVSWVN*WHLFVD
Trigger: GTCCACAAACAGATGCCAGCAATTCACCCAACTTAC...ATAAGCATGGCAGCAACATCTTCCATGCCTTAACATGATGACACTAAAGGCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR-3UTR CCA 90 bp TCTGCCTTTAGTGTCATCATGTTAAGGCATGGAAGATGTTGCTGCCATGCTTATATGGATCCAACACTCTaGAAAGGGATTCAGAAGCCA +
Preference number: 2 (lower is better)
Translates to: SAFSVIMLRHGRCCCHAYMDPTL*KGIQKP
Trigger: TGGCTTCTGAATCCCTTTCCAGAGTGTTGGATCCAT...ATAAGCATGGCAGCAACATCTTCCATGCCTTAACATGATGACACTAAAGGCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR-3UTR CCA 90 bp TTCCCTCCCAAATTTCTACCCTACCGTCCTATGCCACCACTTTCAACTGTCACTACTATGCTGATAGAGTaGATTCTAGAAGTATGGACA +
Preference number: 2 (lower is better)
Translates to: FPPKFLPYRPMPPLSTVTTMLIE*ILEVWT
Trigger: TGTCCATACTTCTAGAATCCACTCTATCAGCATAGT...AGTGACAGTTGAAAGTGGTGGCATAGGACGGTAGGGTAGAAATTTGGGAGGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
3UTR-3UTR GCA 90 bp CTACTACATTTGCTCCTAAGGCTAGACCTGGGATGGCGGCAAGAATTCTATACAATTCATTTCTTCTACTaGCAGGTATTCTTCTGGACT +
Preference number: 2 (lower is better)
Translates to: LLHLLLRLDLGWRQEFYTIHFFY*QVFFWT
Trigger: AGTCCAGAAGAATACCTGGCAGTAGAAGAAATGAAT...TGTATAGAATTCTTGCCGCCATCCCAGGTCTAGCCTTAGGAGCAAATGTAGTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
3UTR-3UTR GCA 90 bp TTCCCTCCCAAATTTCTACCCTACCGTCCTATGCCACCACTTTCAACTGTCACTAAAATAATAACTAGGTaGCTGACCCTTTTGAGAGAA +
Preference number: 2 (lower is better)
Translates to: FPPKFLPYRPMPPLSTVTKIITR*LTLLRE
Trigger: TTCTCTCAAAAGGGTCAGGCACCTAGTTATTATTTT...AGTGACAGTTGAAAGTGGTGGCATAGGACGGTAGGGTAGAAATTTGGGAGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
3UTR-3UTR GCA 90 bp AATCAGAATCATAGGTGCAAAAGAGTAGAGGGGGAGAAACATACACTAGGGAGAGAGGCTTTGCAATACTaGAGTGGTTTGCTACAAAAG +
Preference number: 2 (lower is better)
Translates to: NQNHRCKRVEGEKHTLGREALQY*SGLLQK
Trigger: CTTTTGTAGCAAACCACTGCAGTATTGCAAAGCCTC...TCTCCCTAGTGTATGTTTCTCCCCCTCTACTCTTTTGCACCTATGATTCTGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR-3UTR CCA 90 bp CCCAAATTTCTACCCTACCGTCCTATGCCACCACTTTCAACTGTCACTTTTAGTCCATTCCATCCTTTCTaGTCATGTTGCCTATTTAAC +
Preference number: 2 (lower is better)
Translates to: PKFLPYRPMPPLSTVTFSPFHPF*SCCLFN
Trigger: GTTAAATAGGCAACATGACCAGAAAGGATGGAATGG...ACTAAAAGTGACAGTTGAAAGTGGTGGCATAGGACGGTAGGGTAGAAATTTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
3UTR CAA 90 bp AGACAAGTTCCAAATGTTCTGGAGGCTTTGCAATACTGCAGTGGTTaGCTACAAAAGTCTTTCATGAAGTTCCCAGTAAAAACCACCATG +
Preference number: 2 (lower is better)
Translates to: RQVPNVLEALQYCSG*LQKSFMKFPVKTTM
Trigger: CATGGTGGTTTTTACTGGGAACTTCATGAAAGACTTTTGTAGCAAACCACTGCAGTATTGCAAAGCCTCCAGAACATTTGGAACTTGTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR-3UTR TCA 90 bp TCTGCCTTTAGTGTCATCATGTTAAGGCATGGAAGATGTTGCTGCCATGCTTATTCTTACTCAGGCAGCTaGTCAAAGAATAATGGTCTT +
Preference number: 2 (lower is better)
Translates to: SAFSVIMLRHGRCCCHAYSYSGS*SKNNGL
Trigger: AAGACCATTATTCTTTGATCAGCTGCCTGAGTAAGA...ATAAGCATGGCAGCAACATCTTCCATGCCTTAACATGATGACACTAAAGGCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR-3UTR GCA 90 bp AAGTATGGACAGAGATACCCCATTTCTAGAATCCATCCCATATTTCACTTTTTACACAAGAGGAAAGCCTaGATGAGAGTGAGGCCAAGA +
Preference number: 2 (lower is better)
Translates to: KYGQRYPISRIHPIFHFLHKRKA*MRVRPR
Trigger: TCTTGGCCTCACTCTCATGCAGGCTTTCCTCTTGTG...TAAAAAGTGAAATATGGGATGGATTCTAGAAATGGGGTATCTCTGTCCATACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
3UTR-3UTR GCA 90 bp CCCTACCGTCCTATGCCACCACTTTCAACTGTCACTTTTAGTGGTATATTATATAACCATGCTCTGAATTaGCCAGTATTGTGCTTTGAC +
Preference number: 2 (lower is better)
Translates to: PYRPMPPLSTVTFSGILYNHALN*PVLCFD
Trigger: GTCAAAGCACAATACTGGGCAATTCAGAGCATGGTT...ATATAATATACCACTAAAAGTGACAGTTGAAAGTGGTGGCATAGGACGGTAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
3UTR-3UTR CCA 90 bp GCTGATAGAGTGGATTCTAGAAGTATGGACAGAGATACCCCATTTCTAGAATCCCCATTCCATCCTTTCTaGTCATGTTGCCTATTTAAC +
Preference number: 2 (lower is better)
Translates to: ADRVDSRSMDRDTPFLESPFHPF*SCCLFN
Trigger: GTTAAATAGGCAACATGACCAGAAAGGATGGAATGG...GGATTCTAGAAATGGGGTATCTCTGTCCATACTTCTAGAATCCACTCTATCAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
3UTR-3UTR CCA 90 bp TCTGCCTTTAGTGTCATCATGTTAAGGCATGGAAGATGTTGCTGCCATGCTTATAATTATCAGTTGACTTaGAACCCCGAAGGAAGAATG +
Preference number: 2 (lower is better)
Translates to: SAFSVIMLRHGRCCCHAYNYQLT*NPEGRM
Trigger: CATTCTTCCTTCGGGGTTCCAAGTCAACTGATAATT...ATAAGCATGGCAGCAACATCTTCCATGCCTTAACATGATGACACTAAAGGCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR CAA 90 bp CTTAGTCTAGAAAGGGCCTCCACTTATTTGACCACAGGTAGAAGATaGGCTCTGCTTTCTTCCTGTAATAATATTGGTTTCTATAGGTCA +
Preference number: 2 (lower is better)
Translates to: LSLERASTYLTTGRR*ALLSSCNNIGFYRS
Trigger: TGACCTATAGAAACCAATATTATTACAGGAAGAAAGCAGAGCCAATCTTCTACCTGTGGTCAAATAAGTGGAGGCCCTTTCTAGACTAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR-3UTR TCA 90 bp CTCAGAAAACTTAGTATCACTGAGAGTATATTGGAGAGCTCAAAGTCTTACTCACTTCTAACCATGCTCTaGATTGCCCAGTATTGTGCT +
Preference number: 2 (lower is better)
Translates to: LRKLSITESILESSKSYSLLTML*IAQYCA
Trigger: AGCACAATACTGGGCAATTCAGAGCATGGTTAGAAG...TGAGTAAGACTTTGAGCTCTCCAATATACTCTCAGTGATACTAAGTTTTCTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR-3UTR TCA 90 bp CTCAGAAAACTTAGTATCACTGAGAGTATATTGGAGAGCTCAAAGTCTTACTCAGAGTATTTTATGTGGTaGGTTTGGGGAGAGAAAGAC +
Preference number: 2 (lower is better)
Translates to: LRKLSITESILESSKSYSEYFMW*VWGEKD
Trigger: GTCTTTCTCTCCCCAAACTCACCACATAAAATACTC...TGAGTAAGACTTTGAGCTCTCCAATATACTCTCAGTGATACTAAGTTTTCTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR-3UTR TCA 90 bp CTCAGAAAACTTAGTATCACTGAGAGTATATTGGAGAGCTCAAAGTCTTACTCAAGTCAGTCCCCAGAATaGCAATTATTAGCTCTAGGT +
Preference number: 2 (lower is better)
Translates to: LRKLSITESILESSKSYSSQSPE*QLLALG
Trigger: ACCTAGAGCTAATAATTGTCATTCTGGGGACTGACT...TGAGTAAGACTTTGAGCTCTCCAATATACTCTCAGTGATACTAAGTTTTCTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR-3UTR GCA 90 bp AATCAGAATCATAGGTGCAAAAGAGTAGAGGGGGAGAAACATACACTAGGGAGAAAAATAATAACTAGGTaGCTGACCCTTTTGAGAGAA +
Preference number: 2 (lower is better)
Translates to: NQNHRCKRVEGEKHTLGRKIITR*LTLLRE
Trigger: TTCTCTCAAAAGGGTCAGGCACCTAGTTATTATTTT...TCTCCCTAGTGTATGTTTCTCCCCCTCTACTCTTTTGCACCTATGATTCTGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR-3UTR GCA 90 bp AATCAGAATCATAGGTGCAAAAGAGTAGAGGGGGAGAAACATACACTAGGGAGATGCTTTCTTGTAAACTaGCTTTCAAGTTTGTTACAC +
Preference number: 2 (lower is better)
Translates to: NQNHRCKRVEGEKHTLGRCFLVN*LSSLLH
Trigger: GTGTAACAAACTTGAAAGGCAGTTTACAAGAAAGCA...TCTCCCTAGTGTATGTTTCTCCCCCTCTACTCTTTTGCACCTATGATTCTGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR-3UTR CCA 90 bp AATCAGAATCATAGGTGCAAAAGAGTAGAGGGGGAGAAACATACACTAGGGAGATTTGCAATACTGCAGTaGTTTGCTACAAAAGTCTTT +
Preference number: 2 (lower is better)
Translates to: NQNHRCKRVEGEKHTLGRFAILQ*FATKVF
Trigger: AAAGACTTTTGTAGCAAACCACTGCAGTATTGCAAA...TCTCCCTAGTGTATGTTTCTCCCCCTCTACTCTTTTGCACCTATGATTCTGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR CAA 90 bp AAAGAATGGAGCAAAAGAATGTTAGAAGTAATAACGTCTGGGAACTaGCCAAAATTAGTGATAGACACCAACTCAGGTAGCTCAGATAAC +
Preference number: 2 (lower is better)
Translates to: KEWSKRMLEVITSGN*PKLVIDTNSGSSDN
Trigger: GTTATCTGAGCTACCTGAGTTGGTGTCTATCACTAATTTTGGCAAGTTCCCAGACGTTATTACTTCTAACATTCTTTTGCTCCATTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR CAA 90 bp TGTTATCTCCTTGTGGCTTGTGCTACAAATTTTCCTTATTACCTTTaGCCTCTGGACTTGAATATTTGTATAAGGCCTGATGTTGATCCA +
Preference number: 2 (lower is better)
Translates to: CYLLVACATNFPYYL*PLDLNICIRPDVDP
Trigger: TGGATCAACATCAGGCCTTATACAAATATTCAAGTCCAGAGGCAAAAGGTAATAAGGAAAATTTGTAGCACAAGCCACAAGGAGATAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR-3UTR TCA 90 bp CTCAGAAAACTTAGTATCACTGAGAGTATATTGGAGAGCTCAAAGTCTTACTCAGCATTTTGGTCACAGTaGTCTCTAATTACAATGTGG +
Preference number: 2 (lower is better)
Translates to: LRKLSITESILESSKSYSAFWSQ*SLITMW
Trigger: CCACATTGTAATTAGAGATCACTGTGACCAAAATGC...TGAGTAAGACTTTGAGCTCTCCAATATACTCTCAGTGATACTAAGTTTTCTGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR-3UTR GCA 90 bp AAGTATGGACAGAGATACCCCATTTCTAGAATCCATCCCATATTTCACTTTTTAAACCATGCTCTGAATTaGCCAGTATTGTGCTTTGAC +
Preference number: 2 (lower is better)
Translates to: KYGQRYPISRIHPIFHFLNHALN*PVLCFD
Trigger: GTCAAAGCACAATACTGGGCAATTCAGAGCATGGTT...TAAAAAGTGAAATATGGGATGGATTCTAGAAATGGGGTATCTCTGTCCATACTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
3UTR-3UTR CCA 90 bp CTCAGAAAACTTAGTATCACTGAGAGTATATTGGAGAGCTCAAAGTCTTACTCACCTGCTATTTCTCCATaGCAAATGAAAGTAGTGATC +
Preference number: 2 (lower is better)
Translates to: LRKLSITESILESSKSYSPAISP*QMKVVI
Trigger: GATCACTACTTTCATTTGCCATGGAGAAATAGCAGG...TGAGTAAGACTTTGAGCTCTCCAATATACTCTCAGTGATACTAAGTTTTCTGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR CAA 90 bp ATGTCCAAAACATTAAGTTATTTATTATTCGACTATCTACTACATTaGCTCCTAAGGCTAGACCTGGGATGGCGGCAAGAATTCTATACA +
Preference number: 2 (lower is better)
Translates to: MSKTLSYLLFDYLLH*LLRLDLGWRQEFYT
Trigger: TGTATAGAATTCTTGCCGCCATCCCAGGTCTAGCCTTAGGAGCAAATGTAGTAGATAGTCGAATAATAAATAACTTAATGTTTTGGACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
3UTR CAA 90 bp AAGCTTGCTTCACCATGCAAACCAATAAATTCACTCACAGAATCTTaGATTGATCTGATAGTAGAGTGCTTTCTTGTAAACTGCCTTTCA +
Preference number: 2 (lower is better)
Translates to: KLASPCKPINSLTES*IDLIVECFLVNCLS
Trigger: TGAAAGGCAGTTTACAAGAAAGCACTCTACTATCAGATCAATCAAAGATTCTGTGAGTGAATTTATTGGTTTGCATGGTGAAGCAAGCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR-3UTR GCA 90 bp CTCAGAAAACTTAGTATCACTGAGAGTATATTGGAGAGCTCAAAGTCTTACTCAATTCATTTCTTCTACTaGCAGGTATTCTTCTGGACT +
Preference number: 2 (lower is better)
Translates to: LRKLSITESILESSKSYSIHFFY*QVFFWT
Trigger: AGTCCAGAAGAATACCTGGCAGTAGAAGAAATGAAT...TGAGTAAGACTTTGAGCTCTCCAATATACTCTCAGTGATACTAAGTTTTCTGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR-3UTR GCA 90 bp CTCAGAAAACTTAGTATCACTGAGAGTATATTGGAGAGCTCAAAGTCTTACTCAGTAGAAGATTGGCTCTaGTTTCTTCCTGTAATAATA +
Preference number: 2 (lower is better)
Translates to: LRKLSITESILESSKSYSVEDWL*FLPVII
Trigger: TATTATTACAGGAAGAAAGCAGAGCCAATCTTCTAC...TGAGTAAGACTTTGAGCTCTCCAATATACTCTCAGTGATACTAAGTTTTCTGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR-3UTR GCA 90 bp AAGTATGGACAGAGATACCCCATTTCTAGAATCCATCCCATATTTCACTTTTTAGTCTTGGTTAATCACTaGAGTCAATATTTGTTGGTA +
Preference number: 2 (lower is better)
Translates to: KYGQRYPISRIHPIFHFLVLVNH*SQYLLV
Trigger: TACCAACAAATATTGACTGCAGTGATTAACCAAGAC...TAAAAAGTGAAATATGGGATGGATTCTAGAAATGGGGTATCTCTGTCCATACTT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
3UTR-3UTR CAA 90 bp CTCTGCCAAGCACAATTCCCAAACCTCATCCCAGCCCCTGAAGTCTCCCTGTCCCGTTTCCCACTGGAGTaGCCACATGTTGTGTTTTGC +
Preference number: 3 (lower is better)
Translates to: LCQAQFPNLIPAPEVSLSRFPLE*PHVVFC
Trigger: GCAAAACACAACATGTGGCAACTCCAGTGGGAAACG...GGACAGGGAGACTTCAGGGGCTGGGATGAGGTTTGGGAATTGTGCTTGGCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR-3UTR CAA 90 bp CTCTGCCAAGCACAATTCCCAAACCTCATCCCAGCCCCTGAAGTCTCCCTGTCCCTGAATTGCCCAGTATaGTGCTTTGACCCTGCTTCT +
Preference number: 3 (lower is better)
Translates to: LCQAQFPNLIPAPEVSLSLNCPV*CFDPAS
Trigger: AGAAGCAGGGTCAAAGCACAATACTGGGCAATTCAG...GGACAGGGAGACTTCAGGGGCTGGGATGAGGTTTGGGAATTGTGCTTGGCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR-3UTR CAA 90 bp CTCTGCCAAGCACAATTCCCAAACCTCATCCCAGCCCCTGAAGTCTCCCTGTCCGTAAACTCTCCAGCTTaGAGACTCCCCTTTCCTCTT +
Preference number: 3 (lower is better)
Translates to: LCQAQFPNLIPAPEVSLSVNSPA*RLPFPL
Trigger: AAGAGGAAAGGGGAGTCTCAAAGCTGGAGAGTTTAC...GGACAGGGAGACTTCAGGGGCTGGGATGAGGTTTGGGAATTGTGCTTGGCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR TCA 72 bp CTGCCAAGCACAATTCCCAAACCTCATCCCAGCCCCTaGAGTCTCCCTGTCCCACTTAAGGAAAGAGGGAAA +
Preference number: 3 (lower is better)
Translates to: LPSTIPKPHPSP*SLPVPLKERGK
Trigger: TTTCCCTCTTTCCTTAAGTGGGACAGGGAGACTTCAGGGGCTGGGATGAGGTTTGGGAATTGTGCTTGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR GCA 72 bp GAAACGAGTGTTTCCTGCCTCGTTTCCCACTGGAGTTaGCACATGTTGTGTTTTGCAAGCCTACTCCATCGG +
Preference number: 3 (lower is better)
Translates to: ETSVSCLVSHWS*HMLCFASLLHR
Trigger: CCGATGGAGTAGGCTTGCAAAACACAACATGTGGCAACTCCAGTGGGAAACGAGGCAGGAAACACTCGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR CCA 72 bp AAAGCCTGCATGAGAGTGAGGCCAAGACCAGGGAAATaGATCCAACACTCTGGAAAGGGATTCAGAAGCCAG +
Preference number: 3 (lower is better)
Translates to: KACMRVRPRPGK*IQHSGKGFRSQ
Trigger: CTGGCTTCTGAATCCCTTTCCAGAGTGTTGGATCCATTTCCCTGGTCTTGGCCTCACTCTCATGCAGGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
3UTR CCA 72 bp CTGCAGGAAACGAGTGTTTCCTGCCTCGTTTCCCACTaGAGTTGCCACATGTTGTGTTTTGCAAGCCTACTC +
Preference number: 3 (lower is better)
Translates to: LQETSVSCLVSH*SCHMLCFASLL
Trigger: GAGTAGGCTTGCAAAACACAACATGTGGCAACTCCAGTGGGAAACGAGGCAGGAAACACTCGTTTCCTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR CCA 72 bp GTGAATAAAAATAGGGGCTCAGGACTCATCCGAACGTaGGGTACTGATGCTGCTCAGATTCACTGCCCTGTG +
Preference number: 3 (lower is better)
Translates to: VNKNRGSGLIRT*GTDAAQIHCPV
Trigger: CACAGGGCAGTGAATCTGAGCAGCATCAGTACCCCACGTTCGGATGAGTCCTGAGCCCCTATTTTTATTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR CCA 72 bp GTAAGTTGGGTGAATTGCTGGCATCTGTTTGTGGACTaGTGTGAGCAAGAAACCCATGGGGGCTGTGCTCTT +
Preference number: 3 (lower is better)
Translates to: VSWVNCWHLFVD*CEQETHGGCAL
Trigger: AAGAGCACAGCCCCCATGGGTTTCTTGCTCACACCAGTCCACAAACAGATGCCAGCAATTCACCCAACTTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR-3UTR CAA 90 bp CTCTGCCAAGCACAATTCCCAAACCTCATCCCAGCCCCTGAAGTCTCCCTGTCCATCACTGAGAGTATATaGGAGAGCTCAAAGTCTTAC +
Preference number: 3 (lower is better)
Translates to: LCQAQFPNLIPAPEVSLSITESI*ESSKSY
Trigger: GTAAGACTTTGAGCTCTCCAATATACTCTCAGTGAT...GGACAGGGAGACTTCAGGGGCTGGGATGAGGTTTGGGAATTGTGCTTGGCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR-3UTR CAA 90 bp CTCTGCCAAGCACAATTCCCAAACCTCATCCCAGCCCCTGAAGTCTCCCTGTCCACGAGACTTGATCACTaGATCTGTCAGTATGTGATA +
Preference number: 3 (lower is better)
Translates to: LCQAQFPNLIPAPEVSLSTRLDH*ICQYVI
Trigger: TATCACATACTGACAGATCAAGTGATCAAGTCTCGT...GGACAGGGAGACTTCAGGGGCTGGGATGAGGTTTGGGAATTGTGCTTGGCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR GCA 72 bp TCTAGGGAGGGTATCGAAGCCCAAATTGTTGCTTTCTaGAGGAAACGAGTGTTTCCTGCCTCGTTTCCCACT +
Preference number: 3 (lower is better)
Translates to: SREGIEAQIVAF*RKRVFPASFPT
Trigger: AGTGGGAAACGAGGCAGGAAACACTCGTTTCCTGCAGAAAGCAACAATTTGGGCTTCGATACCCTCCCTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR-3UTR CAA 90 bp CTCTGCCAAGCACAATTCCCAAACCTCATCCCAGCCCCTGAAGTCTCCCTGTCCTCACTCACAGAATCTTaGATTGATCTGATAGTAGAG +
Preference number: 3 (lower is better)
Translates to: LCQAQFPNLIPAPEVSLSSLTES*IDLIVE
Trigger: CTCTACTATCAGATCAATCAAAGATTCTGTGAGTGA...GGACAGGGAGACTTCAGGGGCTGGGATGAGGTTTGGGAATTGTGCTTGGCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR TCA 72 bp GCTTTGAGACTCCCCTTTCCTCTTCTAACCATGCTCTaGATTGCCCAGTATTGTGCTTTGACCCTGCTTCTC +
Preference number: 3 (lower is better)
Translates to: ALRLPFPLLTML*IAQYCALTLLL
Trigger: GAGAAGCAGGGTCAAAGCACAATACTGGGCAATTCAGAGCATGGTTAGAAGAGGAAAGGGGAGTCTCAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
3UTR TCA 72 bp AAACTATCATCTGGTCGAGGAGGGACATTTGTCAGTTaGAGTTCTTCAACGAGCCTGGAGGGAATGTCGCAG +
Preference number: 3 (lower is better)
Translates to: KLSSGRGGTFVS*SSSTSLEGMSQ
Trigger: CTGCGACATTCCCTCCAGGCTCGTTGAAGAACTTCAACTGACAAATGTCCCTCCTCGACCAGATGATAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR CCA 72 bp AACGAGCCTGGAGGGAATGTCGCAGTGTGTTCTGTTTaGAAAGTAAGTTGTACCCTGACTGCCACTATGGAA +
Preference number: 3 (lower is better)
Translates to: NEPGGNVAVCSV*KVSCTLTATME
Trigger: TTCCATAGTGGCAGTCAGGGTACAACTTACTTTCCAAACAGAACACACTGCGACATTCCCTCCAGGCTCGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR CCA 72 bp GAGGGACATTTGTCAGTTGAAGTTCTTCAACGAGCCTaGAGGGAATGTCGCAGTGTGTTCTGTTTGGAAAGT +
Preference number: 3 (lower is better)
Translates to: EGHLSVEVLQRA*RECRSVFCLES
Trigger: ACTTTCCAAACAGAACACACTGCGACATTCCCTCCAGGCTCGTTGAAGAACTTCAACTGACAAATGTCCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR-3UTR CAA 90 bp CCCTACCGTCCTATGCCACCACTTTCAACTGTCACTTTTAGTGGTATATTATATGCCCAGTATTGTGCTTaGACCCTGCTTCTCAGCTCT +
Preference number: 3 (lower is better)
Translates to: PYRPMPPLSTVTFSGILYAQYCA*TLLLSS
Trigger: AGAGCTGAGAAGCAGGGTCAAAGCACAATACTGGGC...ATATAATATACCACTAAAAGTGACAGTTGAAAGTGGTGGCATAGGACGGTAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
3UTR-3UTR CAA 90 bp TTCCCTCCCAAATTTCTACCCTACCGTCCTATGCCACCACTTTCAACTGTCACTCACTGCAGTCAATATTaGTTGGTAAACTCTCCAGCT +
Preference number: 3 (lower is better)
Translates to: FPPKFLPYRPMPPLSTVTHCSQY*LVNSPA
Trigger: AGCTGGAGAGTTTACCAACAAATATTGACTGCAGTG...AGTGACAGTTGAAAGTGGTGGCATAGGACGGTAGGGTAGAAATTTGGGAGGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
3UTR-3UTR CAA 90 bp TCTGCCTTTAGTGTCATCATGTTAAGGCATGGAAGATGTTGCTGCCATGCTTATCGTTTCCCACTGGAGTaGCCACATGTTGTGTTTTGC +
Preference number: 3 (lower is better)
Translates to: SAFSVIMLRHGRCCCHAYRFPLE*PHVVFC
Trigger: GCAAAACACAACATGTGGCAACTCCAGTGGGAAACG...ATAAGCATGGCAGCAACATCTTCCATGCCTTAACATGATGACACTAAAGGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR-3UTR CAA 90 bp GTGATTCCACTAGGTCCTGGGCTTTTCTTTGGTGGAAGACTTTTATTACTCCTTCTGGTGAGCGTTTCCTaGTTGCTGACAATGTTGCTC +
Preference number: 3 (lower is better)
Translates to: VIPLGPGLFFGGRLLLLLLVSVS*LLTMLL
Trigger: GAGCAACATTGTCAGCAACAAGGAAACGCTCACCAG...AAGGAGTAATAAAAGTCTTCCACCAAAGAAAAGCCCAGGACCTAGTGGAATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578928.1
3UTR TCA 72 bp GAAGCAAACTCTCTACCAGACAGAAACAAGGATGTATaGATTGCCAAGAGTTGGCAGCCATCTTGCCAACAC +
Preference number: 3 (lower is better)
Translates to: EANSLPDRNKDV*IAKSWQPSCQH
Trigger: GTGTTGGCAAGATGGCTGCCAACTCTTGGCAATTCATACATCCTTGTTTCTGTCTGGTAGAGAGTTTGCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
3UTR CCA 72 bp ATGTTGTGTTTTGCAAGCCTACTCCATCGGGTGTCCTaGGAATTCTATGAGCCACCCCTATGTTCAAATACT +
Preference number: 3 (lower is better)
Translates to: MLCFASLLHRVS*EFYEPPLCSNT
Trigger: AGTATTTGAACATAGGGGTGGCTCATAGAATTCCCAGGACACCCGATGGAGTAGGCTTGCAAAACACAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR-3UTR CAA 90 bp GCTGATAGAGTGGATTCTAGAAGTATGGACAGAGATACCCCATTTCTAGAATCCATGAATTGCCAAGAGTaGGCAGCCATCTTGCCAACA +
Preference number: 3 (lower is better)
Translates to: ADRVDSRSMDRDTPFLESMNCQE*AAILPT
Trigger: TGTTGGCAAGATGGCTGCCAACTCTTGGCAATTCAT...GGATTCTAGAAATGGGGTATCTCTGTCCATACTTCTAGAATCCACTCTATCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
3UTR-3UTR CAA 90 bp AATCAGAATCATAGGTGCAAAAGAGTAGAGGGGGAGAAACATACACTAGGGAGAGTAAACTCTCCAGCTTaGAGACTCCCCTTTCCTCTT +
Preference number: 3 (lower is better)
Translates to: NQNHRCKRVEGEKHTLGRVNSPA*RLPFPL
Trigger: AAGAGGAAAGGGGAGTCTCAAAGCTGGAGAGTTTAC...TCTCCCTAGTGTATGTTTCTCCCCCTCTACTCTTTTGCACCTATGATTCTGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR-3UTR CAA 90 bp TTAAGTGAAACTGGTATTACTGATAGGCAAAGGTTGGCAGTGATTCCACTAGGTTTGTTGCTGACAATGTaGCTCCCTGTGGCCATCCAT +
Preference number: 3 (lower is better)
Translates to: LSETGITDRQRLAVIPLGLLLTM*LPVAIH
Trigger: ATGGATGGCCACAGGGAGCAACATTGTCAGCAACAA...ACCTAGTGGAATCACTGCCAACCTTTGCCTATCAGTAATACCAGTTTCACTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578928.1
3UTR CCA 72 bp AGTATGAGCCTTTATATGGTAAGTTGGGTGAATTGCTaGCATCTGTTTGTGGACTGGTGTGAGCAAGAAACC +
Preference number: 3 (lower is better)
Translates to: SMSLYMVSWVNC*HLFVDWCEQET
Trigger: GGTTTCTTGCTCACACCAGTCCACAAACAGATGCCAGCAATTCACCCAACTTACCATATAAAGGCTCATACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR-3UTR CAA 90 bp CTCAGAAAACTTAGTATCACTGAGAGTATATTGGAGAGCTCAAAGTCTTACTCAGCCCAGTATTGTGCTTaGACCCTGCTTCTCAGCTCT +
Preference number: 3 (lower is better)
Translates to: LRKLSITESILESSKSYSAQYCA*TLLLSS
Trigger: AGAGCTGAGAAGCAGGGTCAAAGCACAATACTGGGC...TGAGTAAGACTTTGAGCTCTCCAATATACTCTCAGTGATACTAAGTTTTCTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR-3UTR CAA 90 bp CTACTACATTTGCTCCTAAGGCTAGACCTGGGATGGCGGCAAGAATTCTATACATGCAGTCAATATTTGTaGGTAAACTCTCCAGCTTTG +
Preference number: 3 (lower is better)
Translates to: LLHLLLRLDLGWRQEFYTCSQYL*VNSPAL
Trigger: CAAAGCTGGAGAGTTTACCAACAAATATTGACTGCA...TGTATAGAATTCTTGCCGCCATCCCAGGTCTAGCCTTAGGAGCAAATGTAGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
3UTR-3UTR CAA 90 bp TCTGCCTTTAGTGTCATCATGTTAAGGCATGGAAGATGTTGCTGCCATGCTTATAATGTTCTGGAGGCTTaGCAATACTGCAGTGGTTTG +
Preference number: 3 (lower is better)
Translates to: SAFSVIMLRHGRCCCHAYNVLEA*QYCSGL
Trigger: CAAACCACTGCAGTATTGCAAAGCCTCCAGAACATT...ATAAGCATGGCAGCAACATCTTCCATGCCTTAACATGATGACACTAAAGGCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR-3UTR CAA 90 bp CTCAGAAAACTTAGTATCACTGAGAGTATATTGGAGAGCTCAAAGTCTTACTCAGCCACATGTTGTGTTTaGCAAGCCTACTCCATCGGG +
Preference number: 3 (lower is better)
Translates to: LRKLSITESILESSKSYSATCCV*QAYSIG
Trigger: CCCGATGGAGTAGGCTTGCAAAACACAACATGTGGC...TGAGTAAGACTTTGAGCTCTCCAATATACTCTCAGTGATACTAAGTTTTCTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR-3UTR CAA 90 bp TCTGCCTTTAGTGTCATCATGTTAAGGCATGGAAGATGTTGCTGCCATGCTTATGTCGAGGAGGGACATTaGTCAGTTGAAGTTCTTCAA +
Preference number: 3 (lower is better)
Translates to: SAFSVIMLRHGRCCCHAYVEEGH*SVEVLQ
Trigger: TTGAAGAACTTCAACTGACAAATGTCCCTCCTCGAC...ATAAGCATGGCAGCAACATCTTCCATGCCTTAACATGATGACACTAAAGGCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR-3UTR CAA 90 bp CCCTACCGTCCTATGCCACCACTTTCAACTGTCACTTTTAGTGGTATATTATATACAAGGATGTATGAATaGCCAAGAGTTGGCAGCCAT +
Preference number: 3 (lower is better)
Translates to: PYRPMPPLSTVTFSGILYTRMYE*PRVGSH
Trigger: ATGGCTGCCAACTCTTGGCAATTCATACATCCTTGT...ATATAATATACCACTAAAAGTGACAGTTGAAAGTGGTGGCATAGGACGGTAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
3UTR-3UTR CAA 90 bp CTCAGAAAACTTAGTATCACTGAGAGTATATTGGAGAGCTCAAAGTCTTACTCAATGAATTGCCAAGAGTaGGCAGCCATCTTGCCAACA +
Preference number: 3 (lower is better)
Translates to: LRKLSITESILESSKSYSMNCQE*AAILPT
Trigger: TGTTGGCAAGATGGCTGCCAACTCTTGGCAATTCAT...TGAGTAAGACTTTGAGCTCTCCAATATACTCTCAGTGATACTAAGTTTTCTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR-3UTR CAA 90 bp CCCTACCGTCCTATGCCACCACTTTCAACTGTCACTTTTAGTGGTATATTATATCACTGCAGTCAATATTaGTTGGTAAACTCTCCAGCT +
Preference number: 3 (lower is better)
Translates to: PYRPMPPLSTVTFSGILYHCSQY*LVNSPA
Trigger: AGCTGGAGAGTTTACCAACAAATATTGACTGCAGTG...ATATAATATACCACTAAAAGTGACAGTTGAAAGTGGTGGCATAGGACGGTAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
3UTR-3UTR CAA 90 bp CTCAGAAAACTTAGTATCACTGAGAGTATATTGGAGAGCTCAAAGTCTTACTCAGATTCCTTTCTCCTGTaGCCTGTACCCTCCCAATTT +
Preference number: 3 (lower is better)
Translates to: LRKLSITESILESSKSYSDSFLL*PVPSQF
Trigger: AAATTGGGAGGGTACAGGCAACAGGAGAAAGGAATC...TGAGTAAGACTTTGAGCTCTCCAATATACTCTCAGTGATACTAAGTTTTCTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR-3UTR CAA 90 bp CTCAGAAAACTTAGTATCACTGAGAGTATATTGGAGAGCTCAAAGTCTTACTCATGGAGTTGCCACATGTaGTGTTTTGCAAGCCTACTC +
Preference number: 3 (lower is better)
Translates to: LRKLSITESILESSKSYSWSCHM*CFASLL
Trigger: GAGTAGGCTTGCAAAACACAACATGTGGCAACTCCA...TGAGTAAGACTTTGAGCTCTCCAATATACTCTCAGTGATACTAAGTTTTCTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR-3UTR CAA 90 bp CTCAGAAAACTTAGTATCACTGAGAGTATATTGGAGAGCTCAAAGTCTTACTCATCGAAGCCCAAATTGTaGCTTTCTGCAGGAAACGAG +
Preference number: 3 (lower is better)
Translates to: LRKLSITESILESSKSYSSKPKL*LSAGNE
Trigger: CTCGTTTCCTGCAGAAAGCAACAATTTGGGCTTCGA...TGAGTAAGACTTTGAGCTCTCCAATATACTCTCAGTGATACTAAGTTTTCTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR-3UTR CAA 90 bp TCTGCCTTTAGTGTCATCATGTTAAGGCATGGAAGATGTTGCTGCCATGCTTATATCACTGAGAGTATATaGGAGAGCTCAAAGTCTTAC +
Preference number: 3 (lower is better)
Translates to: SAFSVIMLRHGRCCCHAYITESI*ESSKSY
Trigger: GTAAGACTTTGAGCTCTCCAATATACTCTCAGTGAT...ATAAGCATGGCAGCAACATCTTCCATGCCTTAACATGATGACACTAAAGGCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR-3UTR CAA 90 bp TCTGCCTTTAGTGTCATCATGTTAAGGCATGGAAGATGTTGCTGCCATGCTTATAACTTAAGAAGCATTTaGCTTCCAAAGCAGCAACTT +
Preference number: 3 (lower is better)
Translates to: SAFSVIMLRHGRCCCHAYNLRSI*LPKQQL
Trigger: AAGTTGCTGCTTTGGAAGCAAAATGCTTCTTAAGTT...ATAAGCATGGCAGCAACATCTTCCATGCCTTAACATGATGACACTAAAGGCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR-3UTR CAA 90 bp CTCAGAAAACTTAGTATCACTGAGAGTATATTGGAGAGCTCAAAGTCTTACTCAAGGGACATTTGTCAGTaGAAGTTCTTCAACGAGCCT +
Preference number: 3 (lower is better)
Translates to: LRKLSITESILESSKSYSRDICQ*KFFNEP
Trigger: AGGCTCGTTGAAGAACTTCAACTGACAAATGTCCCT...TGAGTAAGACTTTGAGCTCTCCAATATACTCTCAGTGATACTAAGTTTTCTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR-3UTR CAA 90 bp CTCAGAAAACTTAGTATCACTGAGAGTATATTGGAGAGCTCAAAGTCTTACTCAGTCGAGGAGGGACATTaGTCAGTTGAAGTTCTTCAA +
Preference number: 3 (lower is better)
Translates to: LRKLSITESILESSKSYSVEEGH*SVEVLQ
Trigger: TTGAAGAACTTCAACTGACAAATGTCCCTCCTCGAC...TGAGTAAGACTTTGAGCTCTCCAATATACTCTCAGTGATACTAAGTTTTCTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR-3UTR CAA 90 bp TCTGCCTTTAGTGTCATCATGTTAAGGCATGGAAGATGTTGCTGCCATGCTTATTTCCTTTTCAGGAATTaGGAGAACTTATGCTTGGTA +
Preference number: 3 (lower is better)
Translates to: SAFSVIMLRHGRCCCHAYFLFRN*ENLCLV
Trigger: TACCAAGCATAAGTTCTCCAAATTCCTGAAAAGGAA...ATAAGCATGGCAGCAACATCTTCCATGCCTTAACATGATGACACTAAAGGCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR CCA 72 bp TATAGACATAGAACCCTTGACAATGCTTTACTTCTGTaGCTCCTCTTACCCATGGAGTCTTCTAATTCTCAT +
Preference number: 3 (lower is better)
Translates to: YRHRTLDNALLL*LLLPMESSNSH
Trigger: ATGAGAATTAGAAGACTCCATGGGTAAGAGGAGCCACAGAAGTAAAGCATTGTCAAGGGTTCTATGTCTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR CCA 72 bp TGTTACTCAGAAAACTTAGTATCACTGAGAGTATATTaGAGAGCTCAAAGTCTTACTCAGGCAGCTGATCAA +
Preference number: 3 (lower is better)
Translates to: CYSENLVSLRVY*RAQSLTQAADQ
Trigger: TTGATCAGCTGCCTGAGTAAGACTTTGAGCTCTCCAATATACTCTCAGTGATACTAAGTTTTCTGAGTAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR CCA 72 bp AGAATGGAGCAAAAGAATGTTAGAAGTAATAACGTCTaGGAACTTGCCAAAATTAGTGATAGACACCAACTC +
Preference number: 3 (lower is better)
Translates to: RMEQKNVRSNNV*ELAKISDRHQL
Trigger: GAGTTGGTGTCTATCACTAATTTTGGCAAGTTCCCAGACGTTATTACTTCTAACATTCTTTTGCTCCATTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR TCA 72 bp GAATTTGGAGAACTTATGCTTGGTATTTTAAACTCATaGGAACTTAGTCTAGAAAGGGCCTCCACTTATTTG +
Preference number: 3 (lower is better)
Translates to: EFGELMLGILNS*ELSLERASTYL
Trigger: CAAATAAGTGGAGGCCCTTTCTAGACTAAGTTCTCATGAGTTTAAAATACCAAGCATAAGTTCTCCAAATTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR GCA 72 bp TCACTCACAGAATCTTTGATTGATCTGATAGTAGAGTaGTTTCTTGTAAACTGCCTTTCAAGTTTGTTACAC +
Preference number: 3 (lower is better)
Translates to: SLTESLIDLIVE*FLVNCLSSLLH
Trigger: GTGTAACAAACTTGAAAGGCAGTTTACAAGAAAGCACTCTACTATCAGATCAATCAAAGATTCTGTGAGTGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR TCA 90 bp CTCTGCCAAGCACAATTCCCAAACCTCATCCCAGCCCCTGAAGTCTCCCTGTCCCCTCATCCCAGCCCCTaGAGTCTCCCTGTCCCACTT +
Preference number: 4 (lower is better)
Translates to: LCQAQFPNLIPAPEVSLSPHPSP*SLPVPL
Trigger: AAGTGGGACAGGGAGACTTCAGGGGCTGGGATGAGG...GGACAGGGAGACTTCAGGGGCTGGGATGAGGTTTGGGAATTGTGCTTGGCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CCA 90 bp CTCTGCCAAGCACAATTCCCAAACCTCATCCCAGCCCCTGAAGTCTCCCTGTCCCGTTTTCTCCTGCGCTaGCCTGCAAGTAGCAGCGGT +
Preference number: 4 (lower is better)
Translates to: LCQAQFPNLIPAPEVSLSRFLLR*PASSSG
Trigger: ACCGCTGCTACTTGCAGGCCAGCGCAGGAGAAAACG...GGACAGGGAGACTTCAGGGGCTGGGATGAGGTTTGGGAATTGTGCTTGGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CCA 90 bp CCTGTGGCCATCCATCTGAGCTACGTGAGGAGGATTCCATGTGAACGCCGATCACGTTTTCTCCTGCGCTaGCCTGCAAGTAGCAGCGGT +
Preference number: 4 (lower is better)
Translates to: PVAIHLSYVRRIPCERRSRFLLR*PASSSG
Trigger: ACCGCTGCTACTTGCAGGCCAGCGCAGGAGAAAACG...TGATCGGCGTTCACATGGAATCCTCCTCACGTAGCTCAGATGGATGGCCACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578928.1
CDS-3UTR CCA 90 bp CTCTGCCAAGCACAATTCCCAAACCTCATCCCAGCCCCTGAAGTCTCCCTGTCCAGGGAGACACCAGGATaGCAGTTGTGTGCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: LCQAQFPNLIPAPEVSLSRETPG*QLCASP
Trigger: AGGAGAGGCACACAACTGCCATCCTGGTGTCTCCCT...GGACAGGGAGACTTCAGGGGCTGGGATGAGGTTTGGGAATTGTGCTTGGCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR TCA 90 bp CCTGTGGCCATCCATCTGAGCTACGTGAGGAGGATTCCATGTGAACGCCGATCAGCGTTTCCTTGTTGCTaGCAATGTTGCTCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: PVAIHLSYVRRIPCERRSAFPCC*QCCSLW
Trigger: CCACAGGGAGCAACATTGTCAGCAACAAGGAAACGC...TGATCGGCGTTCACATGGAATCCTCCTCACGTAGCTCAGATGGATGGCCACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578928.1
CDS-3UTR GCA 90 bp GGCCAAGACCAGGGAAATGGATCCAACACTCTGGAAAGGGATTCAGAAGCCAGTGGGACTACAGGTGCGTaGCACCAGGCCTGGCTAATT +
Preference number: 4 (lower is better)
Translates to: GQDQGNGSNTLERDSEASGTTGA*HQAWLI
Trigger: AATTAGCCAGGCCTGGTGGCACGCACCTGTAGTCCC...ACTGGCTTCTGAATCCCTTTCCAGAGTGTTGGATCCATTTCCCTGGTCTTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR GCA 90 bp AGGAAAGCCTGCATGAGAGTGAGGCCAAGACCAGGGAAATGGATCCAACACTCTTTGCCCAGGGTGGAGTaGAGTGGTGCGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: RKACMRVRPRPGKWIQHSLPRVE*SGAILA
Trigger: AGCCAAGATCGCACCACTGCACTCCACCCTGGGCAA...AGAGTGTTGGATCCATTTCCCTGGTCTTGGCCTCACTCTCATGCAGGCTTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CCA 90 bp GGCCAAGACCAGGGAAATGGATCCAACACTCTGGAAAGGGATTCAGAAGCCAGTCGTTTTCTCCTGCGCTaGCCTGCAAGTAGCAGCGGT +
Preference number: 4 (lower is better)
Translates to: GQDQGNGSNTLERDSEASRFLLR*PASSSG
Trigger: ACCGCTGCTACTTGCAGGCCAGCGCAGGAGAAAACG...ACTGGCTTCTGAATCCCTTTCCAGAGTGTTGGATCCATTTCCCTGGTCTTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
3UTR CAA 72 bp GTTTCCTGCCTCGTTTCCCACTGGAGTTGCCACATGTaGTGTTTTGCAAGCCTACTCCATCGGGTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: VSCLVSHWSCHM*CFASLLHRVSW
Trigger: CCAGGACACCCGATGGAGTAGGCTTGCAAAACACAACATGTGGCAACTCCAGTGGGAAACGAGGCAGGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR TCA 90 bp AGGAAAGCCTGCATGAGAGTGAGGCCAAGACCAGGGAAATGGATCCAACACTCTGCTGGGTCCCGATCTTaGACCACTCCACCTGTGTTA +
Preference number: 4 (lower is better)
Translates to: RKACMRVRPRPGKWIQHSAGSRS*TTPPVL
Trigger: TAACACAGGTGGAGTGGTTCAAGATCGGGACCCAGC...AGAGTGTTGGATCCATTTCCCTGGTCTTGGCCTCACTCTCATGCAGGCTTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR TCA 90 bp CTCTGCCAAGCACAATTCCCAAACCTCATCCCAGCCCCTGAAGTCTCCCTGTCCGTCCTGGGAATTCTATaGGCCACCCCTATGTTCAAA +
Preference number: 4 (lower is better)
Translates to: LCQAQFPNLIPAPEVSLSVLGIL*ATPMFK
Trigger: TTTGAACATAGGGGTGGCTCATAGAATTCCCAGGAC...GGACAGGGAGACTTCAGGGGCTGGGATGAGGTTTGGGAATTGTGCTTGGCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CCA 90 bp CTCTGCCAAGCACAATTCCCAAACCTCATCCCAGCCCCTGAAGTCTCCCTGTCCCTGCCAAGTTCCCTGTaGGTAAGTGTAAAGAGAGCA +
Preference number: 4 (lower is better)
Translates to: LCQAQFPNLIPAPEVSLSLPSSL*VSVKRA
Trigger: TGCTCTCTTTACACTTACCCACAGGGAACTTGGCAG...GGACAGGGAGACTTCAGGGGCTGGGATGAGGTTTGGGAATTGTGCTTGGCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CCA 90 bp GGCCAAGACCAGGGAAATGGATCCAACACTCTGGAAAGGGATTCAGAAGCCAGTGGACTCATCCGAACGTaGGGTACTGATGCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: GQDQGNGSNTLERDSEASGLIRT*GTDAAQ
Trigger: CTGAGCAGCATCAGTACCCCACGTTCGGATGAGTCC...ACTGGCTTCTGAATCCCTTTCCAGAGTGTTGGATCCATTTCCCTGGTCTTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR CAA 72 bp GCCTCGTTTCCCACTGGAGTTGCCACATGTTGTGTTTaGCAAGCCTACTCCATCGGGTGTCCTGGGAATTCT +
Preference number: 4 (lower is better)
Translates to: ASFPTGVATCCV*QAYSIGCPGNS
Trigger: AGAATTCCCAGGACACCCGATGGAGTAGGCTTGCAAAACACAACATGTGGCAACTCCAGTGGGAAACGAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR TCA 90 bp ACAAGGATGTATGAATTGCCAAGAGTTGGCAGCCATCTTGCCAACACAAGAGGACCTCATCCCAGCCCCTaGAGTCTCCCTGTCCCACTT +
Preference number: 4 (lower is better)
Translates to: TRMYELPRVGSHLANTRGPHPSP*SLPVPL
Trigger: AAGTGGGACAGGGAGACTTCAGGGGCTGGGATGAGG...TCCTCTTGTGTTGGCAAGATGGCTGCCAACTCTTGGCAATTCATACATCCTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR TCA 90 bp GGCCAAGACCAGGGAAATGGATCCAACACTCTGGAAAGGGATTCAGAAGCCAGTAGAGAACCAAGGTCCTaGGCAAACTGCCACCCCAAA +
Preference number: 4 (lower is better)
Translates to: GQDQGNGSNTLERDSEASREPRS*ANCHPK
Trigger: TTTGGGGTGGCAGTTTGCTCAGGACCTTGGTTCTCT...ACTGGCTTCTGAATCCCTTTCCAGAGTGTTGGATCCATTTCCCTGGTCTTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR GCA 90 bp CTCTGCCAAGCACAATTCCCAAACCTCATCCCAGCCCCTGAAGTCTCCCTGTCCAATTGCCCAGTATTGTaGTTTGACCCTGCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: LCQAQFPNLIPAPEVSLSNCPVL*FDPASQ
Trigger: CTGAGAAGCAGGGTCAAAGCACAATACTGGGCAATT...GGACAGGGAGACTTCAGGGGCTGGGATGAGGTTTGGGAATTGTGCTTGGCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CCA 90 bp CTCTGCCAAGCACAATTCCCAAACCTCATCCCAGCCCCTGAAGTCTCCCTGTCCGGTTCCGAAACAATGTaGCTATTTGATGGCACAGCT +
Preference number: 4 (lower is better)
Translates to: LCQAQFPNLIPAPEVSLSGSETM*LFDGTA
Trigger: AGCTGTGCCATCAAATAGCCACATTGTTTCGGAACC...GGACAGGGAGACTTCAGGGGCTGGGATGAGGTTTGGGAATTGTGCTTGGCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CCA 90 bp AGGAAAGCCTGCATGAGAGTGAGGCCAAGACCAGGGAAATGGATCCAACACTCTACGCTCCACCTTCCGTaGCTGCAGTTGCTCACTATT +
Preference number: 4 (lower is better)
Translates to: RKACMRVRPRPGKWIQHSTLHLP*LQLLTI
Trigger: AATAGTGAGCAACTGCAGCCACGGAAGGTGGAGCGT...AGAGTGTTGGATCCATTTCCCTGGTCTTGGCCTCACTCTCATGCAGGCTTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR CCA 90 bp TTCCCTCCCAAATTTCTACCCTACCGTCCTATGCCACCACTTTCAACTGTCACTCGTTTTCTCCTGCGCTaGCCTGCAAGTAGCAGCGGT +
Preference number: 4 (lower is better)
Translates to: FPPKFLPYRPMPPLSTVTRFLLR*PASSSG
Trigger: ACCGCTGCTACTTGCAGGCCAGCGCAGGAGAAAACG...AGTGACAGTTGAAAGTGGTGGCATAGGACGGTAGGGTAGAAATTTGGGAGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR CCA 90 bp AGGAAAGCCTGCATGAGAGTGAGGCCAAGACCAGGGAAATGGATCCAACACTCTTCCTCCCCCTTTTTCTaGATGAAGGGAGACACCAGG +
Preference number: 4 (lower is better)
Translates to: RKACMRVRPRPGKWIQHSSSPFF*MKGDTR
Trigger: CCTGGTGTCTCCCTTCATCCAGAAAAAGGGGGAGGA...AGAGTGTTGGATCCATTTCCCTGGTCTTGGCCTCACTCTCATGCAGGCTTTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CCA 90 bp CTCTGCCAAGCACAATTCCCAAACCTCATCCCAGCCCCTGAAGTCTCCCTGTCCAATGCTTTACTTCTGTaGCTCCTCTTACCCATGGAG +
Preference number: 4 (lower is better)
Translates to: LCQAQFPNLIPAPEVSLSNALLL*LLLPME
Trigger: CTCCATGGGTAAGAGGAGCCACAGAAGTAAAGCATT...GGACAGGGAGACTTCAGGGGCTGGGATGAGGTTTGGGAATTGTGCTTGGCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CCA 90 bp CCTGTGGCCATCCATCTGAGCTACGTGAGGAGGATTCCATGTGAACGCCGATCAGATTCCACTAGGTCCTaGGCTTTTCTTTGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: PVAIHLSYVRRIPCERRSDSTRS*AFLWWK
Trigger: CTTCCACCAAAGAAAAGCCCAGGACCTAGTGGAATC...TGATCGGCGTTCACATGGAATCCTCCTCACGTAGCTCAGATGGATGGCCACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578928.1
CDS-3UTR TCA 90 bp CTCTGCCAAGCACAATTCCCAAACCTCATCCCAGCCCCTGAAGTCTCCCTGTCCGAGTATTTTATGTGGTaGGTTTGGGGAGAGAAAGAC +
Preference number: 4 (lower is better)
Translates to: LCQAQFPNLIPAPEVSLSEYFMW*VWGEKD
Trigger: GTCTTTCTCTCCCCAAACTCACCACATAAAATACTC...GGACAGGGAGACTTCAGGGGCTGGGATGAGGTTTGGGAATTGTGCTTGGCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR TCA 90 bp CTACTACATTTGCTCCTAAGGCTAGACCTGGGATGGCGGCAAGAATTCTATACAGGCAGGAGAATGGCGTaGACCTGGAAGACGCAGCTT +
Preference number: 4 (lower is better)
Translates to: LLHLLLRLDLGWRQEFYTGRRMA*TWKTQL
Trigger: AAGCTGCGTCTTCCAGGTTCACGCCATTCTCCTGCC...TGTATAGAATTCTTGCCGCCATCCCAGGTCTAGCCTTAGGAGCAAATGTAGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR TCA 90 bp AGGAAAGCCTGCATGAGAGTGAGGCCAAGACCAGGGAAATGGATCCAACACTCTGCCTCAAAACTATCTTaGGATGTGAGTGCTGCTCGC +
Preference number: 4 (lower is better)
Translates to: RKACMRVRPRPGKWIQHSASKLS*DVSAAR
Trigger: GCGAGCAGCACTCACATCTCAAGATAGTTTTGAGGC...AGAGTGTTGGATCCATTTCCCTGGTCTTGGCCTCACTCTCATGCAGGCTTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581982.5
CDS-3UTR GCA 90 bp ACAAGGATGTATGAATTGCCAAGAGTTGGCAGCCATCTTGCCAACACAAGAGGACCGAGATTGTGCCATTaGACTCCAGCCCGGGCAACA +
Preference number: 4 (lower is better)
Translates to: TRMYELPRVGSHLANTRGPRLCH*TPARAT
Trigger: TGTTGCCCGGGCTGGAGTGCAATGGCACAATCTCGG...TCCTCTTGTGTTGGCAAGATGGCTGCCAACTCTTGGCAATTCATACATCCTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR GCA 90 bp CTCTGCCAAGCACAATTCCCAAACCTCATCCCAGCCCCTGAAGTCTCCCTGTCCCTTAAAAGACAGGTTTaGTCCTTTATGAGGATGGGC +
Preference number: 4 (lower is better)
Translates to: LCQAQFPNLIPAPEVSLSLKRQV*SFMRMG
Trigger: GCCCATCCTCATAAAGGAGCAAACCTGTCTTTTAAG...GGACAGGGAGACTTCAGGGGCTGGGATGAGGTTTGGGAATTGTGCTTGGCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582621.6
CDS-3UTR CCA 90 bp TCTACCAGACAGAAACAAGGATGTATGAATTGCCAAGAGTTGGCAGCCATCTTGGCCTCAACACCCTCTTaGTCACTGCAAGCTCCCCGC +
Preference number: 4 (lower is better)
Translates to: STRQKQGCMNCQELAAILASTPS*SLQAPR
Trigger: GCGGGGAGCTTGCAGTGACCAAGAGGGTGTTGAGGC...CAAGATGGCTGCCAACTCTTGGCAATTCATACATCCTTGTTTCTGTCTGGTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000581982.5
3UTR CAA 72 bp GGAAACGAGTGTTTCCTGCCTCGTTTCCCACTGGAGTaGCCACATGTTGTGTTTTGCAAGCCTACTCCATCG +
Preference number: 4 (lower is better)
Translates to: GNECFLPRFPLE*PHVVFCKPTPS
Trigger: CGATGGAGTAGGCTTGCAAAACACAACATGTGGCAACTCCAGTGGGAAACGAGGCAGGAAACACTCGTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR CAA 72 bp CCCTGTGTTCTAGGGAGGGTATCGAAGCCCAAATTGTaGCTTTCTGCAGGAAACGAGTGTTTCCTGCCTCGT +
Preference number: 4 (lower is better)
Translates to: PCVLGRVSKPKL*LSAGNECFLPR
Trigger: ACGAGGCAGGAAACACTCGTTTCCTGCAGAAAGCAACAATTTGGGCTTCGATACCCTCCCTAGAACACAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR CAA 72 bp CTGCCCTGTGTTCTAGGGAGGGTATCGAAGCCCAAATaGTTGCTTTCTGCAGGAAACGAGTGTTTCCTGCCT +
Preference number: 4 (lower is better)
Translates to: LPCVLGRVSKPK*LLSAGNECFLP
Trigger: AGGCAGGAAACACTCGTTTCCTGCAGAAAGCAACAATTTGGGCTTCGATACCCTCCCTAGAACACAGGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR CAA 72 bp GCGAACAATCCTGTCTTTCTGGTGAGCGTTTCCTTGTaGCTGACAATGTTGCTCCCTGTGGCCATCCATCTG +
Preference number: 4 (lower is better)
Translates to: ANNPVFLVSVSL*LTMLLPVAIHL
Trigger: CAGATGGATGGCCACAGGGAGCAACATTGTCAGCAACAAGGAAACGCTCACCAGAAAGACAGGATTGTTCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578928.1
CDS-3UTR TCA 90 bp TTCCCTCCCAAATTTCTACCCTACCGTCCTATGCCACCACTTTCAACTGTCACTGTTAAGAGGTCGATCTaGCGGGGCTGGATCTTTTCC +
Preference number: 4 (lower is better)
Translates to: FPPKFLPYRPMPPLSTVTVKRSI*RGWIFS
Trigger: GGAAAAGATCCAGCCCCGTCAGATCGACCTCTTAAC...AGTGACAGTTGAAAGTGGTGGCATAGGACGGTAGGGTAGAAATTTGGGAGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR TCA 90 bp GGCCAAGACCAGGGAAATGGATCCAACACTCTGGAAAGGGATTCAGAAGCCAGTTTGGGAACTTGGAGGTaGAATTTCTGCCATGGACCA +
Preference number: 4 (lower is better)
Translates to: GQDQGNGSNTLERDSEASLGTWR*NFCHGP
Trigger: TGGTCCATGGCAGAAATTTCACCTCCAAGTTCCCAA...ACTGGCTTCTGAATCCCTTTCCAGAGTGTTGGATCCATTTCCCTGGTCTTGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR TCA 90 bp CTCTGCCAAGCACAATTCCCAAACCTCATCCCAGCCCCTGAAGTCTCCCTGTCCGCATTTTGGTCACAGTaGTCTCTAATTACAATGTGG +
Preference number: 4 (lower is better)
Translates to: LCQAQFPNLIPAPEVSLSAFWSQ*SLITMW
Trigger: CCACATTGTAATTAGAGATCACTGTGACCAAAATGC...GGACAGGGAGACTTCAGGGGCTGGGATGAGGTTTGGGAATTGTGCTTGGCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR TCA 90 bp CTCTGCCAAGCACAATTCCCAAACCTCATCCCAGCCCCTGAAGTCTCCCTGTCCACTTATACAGAAGTCTaGAGGTGGAGATCAGTACTT +
Preference number: 4 (lower is better)
Translates to: LCQAQFPNLIPAPEVSLSTYTEV*RWRSVL
Trigger: AAGTACTGATCTCCACCTTCAGACTTCTGTATAAGT...GGACAGGGAGACTTCAGGGGCTGGGATGAGGTTTGGGAATTGTGCTTGGCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR TCA 90 bp CCCAAATTTCTACCCTACCGTCCTATGCCACCACTTTCAACTGTCACTTTTAGTGGCAGGAGAATGGCGTaGACCTGGAAGACGCAGCTT +
Preference number: 4 (lower is better)
Translates to: PKFLPYRPMPPLSTVTFSGRRMA*TWKTQL
Trigger: AAGCTGCGTCTTCCAGGTTCACGCCATTCTCCTGCC...ACTAAAAGTGACAGTTGAAAGTGGTGGCATAGGACGGTAGGGTAGAAATTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR TCA 90 bp TTCCCTCCCAAATTTCTACCCTACCGTCCTATGCCACCACTTTCAACTGTCACTGAGCTCTGTGATGAGTaGGCATCCCCAGCAGTTCAT +
Preference number: 4 (lower is better)
Translates to: FPPKFLPYRPMPPLSTVTELCDE*ASPAVH
Trigger: ATGAACTGCTGGGGATGCTCACTCATCACAGAGCTC...AGTGACAGTTGAAAGTGGTGGCATAGGACGGTAGGGTAGAAATTTGGGAGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR GCA 90 bp ATCCAACACTCTGGAAAGGGATTCAGAAGCCAGTTTATGCCCATACTTAATTCTCACCCTCTTGGTCACTaGAAGCTCCCCGCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: IQHSGKGFRSQFMPILNSHPLGH*KLPAAP
Trigger: GGGAGCAGCGGGGAGCTTGCAGTGACCAAGAGGGTG...AGAATTAAGTATGGGCATAAACTGGCTTCTGAATCCCTTTCCAGAGTGTTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000581982.5
CDS-3UTR GCA 90 bp TTCCCTCCCAAATTTCTACCCTACCGTCCTATGCCACCACTTTCAACTGTCACTGGTTTCGTTTTCTCCTaGGCTGGCCTGCAAGTAGCA +
Preference number: 4 (lower is better)
Translates to: FPPKFLPYRPMPPLSTVTGFVFS*AGLQVA
Trigger: TGCTACTTGCAGGCCAGCGCAGGAGAAAACGAAACC...AGTGACAGTTGAAAGTGGTGGCATAGGACGGTAGGGTAGAAATTTGGGAGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR GCA 90 bp CCCAAATTTCTACCCTACCGTCCTATGCCACCACTTTCAACTGTCACTTTTAGTGGGACTACAGGTGCGTaGCACCAGGCCTGGCTAATT +
Preference number: 4 (lower is better)
Translates to: PKFLPYRPMPPLSTVTFSGTTGA*HQAWLI
Trigger: AATTAGCCAGGCCTGGTGGCACGCACCTGTAGTCCC...ACTAAAAGTGACAGTTGAAAGTGGTGGCATAGGACGGTAGGGTAGAAATTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR GCA 90 bp CTCTGCCAAGCACAATTCCCAAACCTCATCCCAGCCCCTGAAGTCTCCCTGTCCCAAATTGTTGCTTTCTaGAGGAAACGAGTGTTTCCT +
Preference number: 4 (lower is better)
Translates to: LCQAQFPNLIPAPEVSLSQIVAF*RKRVFP
Trigger: AGGAAACACTCGTTTCCTGCAGAAAGCAACAATTTG...GGACAGGGAGACTTCAGGGGCTGGGATGAGGTTTGGGAATTGTGCTTGGCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR CAA 72 bp CAACGAGCCTGGAGGGAATGTCGCAGTGTGTTCTGTTaGGAAAGTAAGTTGTACCCTGACTGCCACTATGGA +
Preference number: 4 (lower is better)
Translates to: QRAWRECRSVFC*ESKLYPDCHYG
Trigger: TCCATAGTGGCAGTCAGGGTACAACTTACTTTCCAAACAGAACACACTGCGACATTCCCTCCAGGCTCGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR CAA 72 bp ACAGCGAACAATCCTGTCTTTCTGGTGAGCGTTTCCTaGTTGCTGACAATGTTGCTCCCTGTGGCCATCCAT +
Preference number: 4 (lower is better)
Translates to: TANNPVFLVSVS*LLTMLLPVAIH
Trigger: ATGGATGGCCACAGGGAGCAACATTGTCAGCAACAAGGAAACGCTCACCAGAAAGACAGGATTGTTCGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578928.1
CDS-3UTR TCA 90 bp CTCTGCCAAGCACAATTCCCAAACCTCATCCCAGCCCCTGAAGTCTCCCTGTCCATTGGAAGCCATCGTTaGATTCAAAAAGTAAACCCT +
Preference number: 4 (lower is better)
Translates to: LCQAQFPNLIPAPEVSLSIGSHR*IQKVNP
Trigger: AGGGTTTACTTTTTGAATTCAACGATGGCTTCCAAT...GGACAGGGAGACTTCAGGGGCTGGGATGAGGTTTGGGAATTGTGCTTGGCAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR TCA 90 bp ACAAGGATGTATGAATTGCCAAGAGTTGGCAGCCATCTTGCCAACACAAGAGGAGTTAAGAGGTCGATCTaGCGGGGCTGGATCTTTTCC +
Preference number: 4 (lower is better)
Translates to: TRMYELPRVGSHLANTRGVKRSI*RGWIFS
Trigger: GGAAAAGATCCAGCCCCGTCAGATCGACCTCTTAAC...TCCTCTTGTGTTGGCAAGATGGCTGCCAACTCTTGGCAATTCATACATCCTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR TCA 90 bp TTCCCTCCCAAATTTCTACCCTACCGTCCTATGCCACCACTTTCAACTGTCACTCACAAGCATTACCCCTaGGGGTATAACAGGAGCATC +
Preference number: 4 (lower is better)
Translates to: FPPKFLPYRPMPPLSTVTHKHYP*GYNRSI
Trigger: GATGCTCCTGTTATACCCTCAGGGGTAATGCTTGTG...AGTGACAGTTGAAAGTGGTGGCATAGGACGGTAGGGTAGAAATTTGGGAGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR TCA 90 bp CCCAAATTTCTACCCTACCGTCCTATGCCACCACTTTCAACTGTCACTTTTAGTGGCAGGTGGATCACCTaGGGTCCAGAGTTCAAGACA +
Preference number: 4 (lower is better)
Translates to: PKFLPYRPMPPLSTVTFSGRWIT*GPEFKT
Trigger: TGTCTTGAACTCTGGACCTCAGGTGATCCACCTGCC...ACTAAAAGTGACAGTTGAAAGTGGTGGCATAGGACGGTAGGGTAGAAATTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR TCA 90 bp CTACTACATTTGCTCCTAAGGCTAGACCTGGGATGGCGGCAAGAATTCTATACATGCCACTATGGAAGCTaGAGGGGGAGATACAAGCTG +
Preference number: 4 (lower is better)
Translates to: LLHLLLRLDLGWRQEFYTCHYGS*RGRYKL
Trigger: CAGCTTGTATCTCCCCCTTCAGCTTCCATAGTGGCA...TGTATAGAATTCTTGCCGCCATCCCAGGTCTAGCCTTAGGAGCAAATGTAGTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR TCA 90 bp TCTACCAGACAGAAACAAGGATGTATGAATTGCCAAGAGTTGGCAGCCATCTTGGTTTGTGGACTGGTGTaGGCAAGAAACCCATGGGGG +
Preference number: 4 (lower is better)
Translates to: STRQKQGCMNCQELAAILVCGLV*ARNPWG
Trigger: CCCCCATGGGTTTCTTGCTCACACCAGTCCACAAAC...CAAGATGGCTGCCAACTCTTGGCAATTCATACATCCTTGTTTCTGTCTGGTAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR TCA 90 bp GGCCAAGACCAGGGAAATGGATCCAACACTCTGGAAAGGGATTCAGAAGCCAGTAGGTTTGCTCCTTTATaGGGATGGGCAGATTTGAGT +
Preference number: 4 (lower is better)
Translates to: GQDQGNGSNTLERDSEASRFAPL*GWADLS
Trigger: ACTCAAATCTGCCCATCCTCATAAAGGAGCAAACCT...ACTGGCTTCTGAATCCCTTTCCAGAGTGTTGGATCCATTTCCCTGGTCTTGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582621.6
CDS-3UTR GCA 90 bp AGGAAAGCCTGCATGAGAGTGAGGCCAAGACCAGGGAAATGGATCCAACACTCTCCACCTGTGTTAAGATaGCCATTGATGGATACACAC +
Preference number: 4 (lower is better)
Translates to: RKACMRVRPRPGKWIQHSPPVLR*PLMDTH
Trigger: GTGTGTATCCATCAATGGGCATCTTAACACAGGTGG...AGAGTGTTGGATCCATTTCCCTGGTCTTGGCCTCACTCTCATGCAGGCTTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR GCA 90 bp ACAAGGATGTATGAATTGCCAAGAGTTGGCAGCCATCTTGCCAACACAAGAGGAGGTTTCGTTTTCTCCTaGGCTGGCCTGCAAGTAGCA +
Preference number: 4 (lower is better)
Translates to: TRMYELPRVGSHLANTRGGFVFS*AGLQVA
Trigger: TGCTACTTGCAGGCCAGCGCAGGAGAAAACGAAACC...TCCTCTTGTGTTGGCAAGATGGCTGCCAACTCTTGGCAATTCATACATCCTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR GCA 90 bp CTCTGCCAAGCACAATTCCCAAACCTCATCCCAGCCCCTGAAGTCTCCCTGTCCGATCTGATAGTAGAGTaGTTTCTTGTAAACTGCCTT +
Preference number: 4 (lower is better)
Translates to: LCQAQFPNLIPAPEVSLSDLIVE*FLVNCL
Trigger: AAGGCAGTTTACAAGAAAGCACTCTACTATCAGATC...GGACAGGGAGACTTCAGGGGCTGGGATGAGGTTTGGGAATTGTGCTTGGCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR GCA 90 bp AATCAGAATCATAGGTGCAAAAGAGTAGAGGGGGAGAAACATACACTAGGGAGACCGAGATTGTGCCATTaGACTCCAGCCCGGGCAACA +
Preference number: 4 (lower is better)
Translates to: NQNHRCKRVEGEKHTLGRPRLCH*TPARAT
Trigger: TGTTGCCCGGGCTGGAGTGCAATGGCACAATCTCGG...TCTCCCTAGTGTATGTTTCTCCCCCTCTACTCTTTTGCACCTATGATTCTGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR GCA 90 bp CCCTACCGTCCTATGCCACCACTTTCAACTGTCACTTTTAGTGGTATATTATATGGTGAGCCGAGATTGTaGCATTGCACTCCAGCCCGG +
Preference number: 4 (lower is better)
Translates to: PYRPMPPLSTVTFSGILYGEPRL*HCTPAR
Trigger: CCGGGCTGGAGTGCAATGGCACAATCTCGGCTCACC...ATATAATATACCACTAAAAGTGACAGTTGAAAGTGGTGGCATAGGACGGTAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CCA 90 bp GGCCAAGACCAGGGAAATGGATCCAACACTCTGGAAAGGGATTCAGAAGCCAGTAGGAAGCAATACCACTaGAGAAGCTCTGTGAATGTC +
Preference number: 4 (lower is better)
Translates to: GQDQGNGSNTLERDSEASRKQYH*RSSVNV
Trigger: GACATTCACAGAGCTTCTCCAGTGGTATTGCTTCCT...ACTGGCTTCTGAATCCCTTTCCAGAGTGTTGGATCCATTTCCCTGGTCTTGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CCA 90 bp CTCTGCCAAGCACAATTCCCAAACCTCATCCCAGCCCCTGAAGTCTCCCTGTCCCATGTTATCTCCTTGTaGCTTGTGCTACAAATTTTC +
Preference number: 4 (lower is better)
Translates to: LCQAQFPNLIPAPEVSLSHVISL*LVLQIF
Trigger: GAAAATTTGTAGCACAAGCCACAAGGAGATAACATG...GGACAGGGAGACTTCAGGGGCTGGGATGAGGTTTGGGAATTGTGCTTGGCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR TCA 90 bp TCTACCAGACAGAAACAAGGATGTATGAATTGCCAAGAGTTGGCAGCCATCTTGCTCGGCAAAGGGAACTaGTGTATGCCAAAGCACCTC +
Preference number: 4 (lower is better)
Translates to: STRQKQGCMNCQELAAILLGKGN*CMPKHL
Trigger: GAGGTGCTTTGGCATACATCAGTTCCCTTTGCCGAG...CAAGATGGCTGCCAACTCTTGGCAATTCATACATCCTTGTTTCTGTCTGGTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR TCA 90 bp GGCCAAGACCAGGGAAATGGATCCAACACTCTGGAAAGGGATTCAGAAGCCAGTTCAAAACTATCTGACTaGACCACCTGTATCACCTTC +
Preference number: 4 (lower is better)
Translates to: GQDQGNGSNTLERDSEASSKLSD*TTCITF
Trigger: GAAGGTGATACAGGTGGTTCAGTCAGATAGTTTTGA...ACTGGCTTCTGAATCCCTTTCCAGAGTGTTGGATCCATTTCCCTGGTCTTGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR TCA 90 bp CTACTACATTTGCTCCTAAGGCTAGACCTGGGATGGCGGCAAGAATTCTATACACACAAGCATTACCCCTaGGGGTATAACAGGAGCATC +
Preference number: 4 (lower is better)
Translates to: LLHLLLRLDLGWRQEFYTHKHYP*GYNRSI
Trigger: GATGCTCCTGTTATACCCTCAGGGGTAATGCTTGTG...TGTATAGAATTCTTGCCGCCATCCCAGGTCTAGCCTTAGGAGCAAATGTAGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR TCA 90 bp GGCCAAGACCAGGGAAATGGATCCAACACTCTGGAAAGGGATTCAGAAGCCAGTAGTCAGTCCCCAGAATaGCAATTATTAGCTCTAGGT +
Preference number: 4 (lower is better)
Translates to: GQDQGNGSNTLERDSEASSQSPE*QLLALG
Trigger: ACCTAGAGCTAATAATTGTCATTCTGGGGACTGACT...ACTGGCTTCTGAATCCCTTTCCAGAGTGTTGGATCCATTTCCCTGGTCTTGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR TCA 90 bp AATCAGAATCATAGGTGCAAAAGAGTAGAGGGGGAGAAACATACACTAGGGAGACCGAACGTGGGGTACTaGTGCTGCTCAGATTCACTG +
Preference number: 4 (lower is better)
Translates to: NQNHRCKRVEGEKHTLGRPNVGY*CCSDSL
Trigger: CAGTGAATCTGAGCAGCATCAGTACCCCACGTTCGG...TCTCCCTAGTGTATGTTTCTCCCCCTCTACTCTTTTGCACCTATGATTCTGATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR TCA 90 bp TCTACCAGACAGAAACAAGGATGTATGAATTGCCAAGAGTTGGCAGCCATCTTGTGCCACTATGGAAGCTaGAGGGGGAGATACAAGCTG +
Preference number: 4 (lower is better)
Translates to: STRQKQGCMNCQELAAILCHYGS*RGRYKL
Trigger: CAGCTTGTATCTCCCCCTTCAGCTTCCATAGTGGCA...CAAGATGGCTGCCAACTCTTGGCAATTCATACATCCTTGTTTCTGTCTGGTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR TCA 90 bp ACAAGGATGTATGAATTGCCAAGAGTTGGCAGCCATCTTGCCAACACAAGAGGAGGGCCTCCACTTATTTaGCCACAGGTAGAAGATTGG +
Preference number: 4 (lower is better)
Translates to: TRMYELPRVGSHLANTRGGPPLI*PQVEDW
Trigger: CCAATCTTCTACCTGTGGTCAAATAAGTGGAGGCCC...TCCTCTTGTGTTGGCAAGATGGCTGCCAACTCTTGGCAATTCATACATCCTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR TCA 90 bp TCTACCAGACAGAAACAAGGATGTATGAATTGCCAAGAGTTGGCAGCCATCTTGACTGGAGAAGCTCTGTaGATGTCCCAGACACAGACC +
Preference number: 4 (lower is better)
Translates to: STRQKQGCMNCQELAAILTGEAL*MSQTQT
Trigger: GGTCTGTGTCTGGGACATTCACAGAGCTTCTCCAGT...CAAGATGGCTGCCAACTCTTGGCAATTCATACATCCTTGTTTCTGTCTGGTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR TCA 90 bp TCTACCAGACAGAAACAAGGATGTATGAATTGCCAAGAGTTGGCAGCCATCTTGAGAGAACCAAGGTCCTaGGCAAACTGCCACCCCAAA +
Preference number: 4 (lower is better)
Translates to: STRQKQGCMNCQELAAILREPRS*ANCHPK
Trigger: TTTGGGGTGGCAGTTTGCTCAGGACCTTGGTTCTCT...CAAGATGGCTGCCAACTCTTGGCAATTCATACATCCTTGTTTCTGTCTGGTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR TCA 90 bp CCCAAATTTCTACCCTACCGTCCTATGCCACCACTTTCAACTGTCACTTTTAGTGAGGATGGGCAGATTTaGGTTTCTTCTCTCTCGGGG +
Preference number: 4 (lower is better)
Translates to: PKFLPYRPMPPLSTVTFSEDGQI*VSSLSG
Trigger: CCCCGAGAGAGAAGAAACTCAAATCTGCCCATCCTC...ACTAAAAGTGACAGTTGAAAGTGGTGGCATAGGACGGTAGGGTAGAAATTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582621.6
CDS-3UTR GCA 90 bp TTCCCTCCCAAATTTCTACCCTACCGTCCTATGCCACCACTTTCAACTGTCACTTTCCGTGGCTGCAGTTaGTCACTATTTGTCTTGGGA +
Preference number: 4 (lower is better)
Translates to: FPPKFLPYRPMPPLSTVTFRGCS*SLFVLG
Trigger: TCCCAAGACAAATAGTGAGCAACTGCAGCCACGGAA...AGTGACAGTTGAAAGTGGTGGCATAGGACGGTAGGGTAGAAATTTGGGAGGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR GCA 90 bp GGCCAAGACCAGGGAAATGGATCCAACACTCTGGAAAGGGATTCAGAAGCCAGTTCTATAGTTATTGGGTaGCTTCTGTGTATCCCAGGA +
Preference number: 4 (lower is better)
Translates to: GQDQGNGSNTLERDSEASSIVIG*LLCIPG
Trigger: TCCTGGGATACACAGAAGGCACCCAATAACTATAGA...ACTGGCTTCTGAATCCCTTTCCAGAGTGTTGGATCCATTTCCCTGGTCTTGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR GCA 90 bp AGGAAAGCCTGCATGAGAGTGAGGCCAAGACCAGGGAAATGGATCCAACACTCTAACCATGCTCTGAATTaGCCAGTATTGTGCTTTGAC +
Preference number: 4 (lower is better)
Translates to: RKACMRVRPRPGKWIQHSNHALN*PVLCFD
Trigger: GTCAAAGCACAATACTGGGCAATTCAGAGCATGGTT...AGAGTGTTGGATCCATTTCCCTGGTCTTGGCCTCACTCTCATGCAGGCTTTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR GCA 90 bp CTCTGCCAAGCACAATTCCCAAACCTCATCCCAGCCCCTGAAGTCTCCCTGTCCAAAATAATAACTAGGTaGCTGACCCTTTTGAGAGAA +
Preference number: 4 (lower is better)
Translates to: LCQAQFPNLIPAPEVSLSKIITR*LTLLRE
Trigger: TTCTCTCAAAAGGGTCAGGCACCTAGTTATTATTTT...GGACAGGGAGACTTCAGGGGCTGGGATGAGGTTTGGGAATTGTGCTTGGCAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR GCA 90 bp TTCCCTCCCAAATTTCTACCCTACCGTCCTATGCCACCACTTTCAACTGTCACTTACCCTACCGTCCTATaGCACCACTTTCAACTGTCA +
Preference number: 4 (lower is better)
Translates to: FPPKFLPYRPMPPLSTVTYPTVL*HHFQLS
Trigger: TGACAGTTGAAAGTGGTGGCATAGGACGGTAGGGTA...AGTGACAGTTGAAAGTGGTGGCATAGGACGGTAGGGTAGAAATTTGGGAGGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR GCA 90 bp AGGAAAGCCTGCATGAGAGTGAGGCCAAGACCAGGGAAATGGATCCAACACTCTCAGTATCTGTTTTCGTaGTTACAACCAATACCCCCA +
Preference number: 4 (lower is better)
Translates to: RKACMRVRPRPGKWIQHSQYLFS*LQPIPP
Trigger: TGGGGGTATTGGTTGTAAGCACGAAAACAGATACTG...AGAGTGTTGGATCCATTTCCCTGGTCTTGGCCTCACTCTCATGCAGGCTTTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR GCA 90 bp GGCCAAGACCAGGGAAATGGATCCAACACTCTGGAAAGGGATTCAGAAGCCAGTTCAACAAACATGTGCTaGATGCATTCTCTGTGCCTA +
Preference number: 4 (lower is better)
Translates to: GQDQGNGSNTLERDSEASSTNMC*MHSLCL
Trigger: TAGGCACAGAGAATGCATGCAGCACATGTTTGTTGA...ACTGGCTTCTGAATCCCTTTCCAGAGTGTTGGATCCATTTCCCTGGTCTTGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582621.6
CDS-3UTR CCA 90 bp GATTCAGAAGCCAGTTTATGCCCATACTTAATTCTAGACACAACATTTAAGCCCGCCTCAACACCCTCTTaGTCACTGCAAGCTCCCCGC +
Preference number: 4 (lower is better)
Translates to: DSEASLCPYLILDTTFKPASTPS*SLQAPR
Trigger: GCGGGGAGCTTGCAGTGACCAAGAGGGTGTTGAGGC...GGGCTTAAATGTTGTGTCTAGAATTAAGTATGGGCATAAACTGGCTTCTGAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000581982.5
CDS-3UTR CCA 90 bp CCCAAATTTCTACCCTACCGTCCTATGCCACCACTTTCAACTGTCACTTTTAGTGCTATGGAATCCTGCTaGGTCCCGATCTTGAACCAC +
Preference number: 4 (lower is better)
Translates to: PKFLPYRPMPPLSTVTFSAMESC*VPILNH
Trigger: GTGGTTCAAGATCGGGACCCAGCAGGATTCCATAGC...ACTAAAAGTGACAGTTGAAAGTGGTGGCATAGGACGGTAGGGTAGAAATTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CCA 90 bp CTCTGCCAAGCACAATTCCCAAACCTCATCCCAGCCCCTGAAGTCTCCCTGTCCTTTGCAATACTGCAGTaGTTTGCTACAAAAGTCTTT +
Preference number: 4 (lower is better)
Translates to: LCQAQFPNLIPAPEVSLSFAILQ*FATKVF
Trigger: AAAGACTTTTGTAGCAAACCACTGCAGTATTGCAAA...GGACAGGGAGACTTCAGGGGCTGGGATGAGGTTTGGGAATTGTGCTTGGCAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CCA 90 bp TTCCCTCCCAAATTTCTACCCTACCGTCCTATGCCACCACTTTCAACTGTCACTGCCCAGAGTCTTGGCTaGAAGAACTCTAATGAACAG +
Preference number: 4 (lower is better)
Translates to: FPPKFLPYRPMPPLSTVTAQSLG*KNSNEQ
Trigger: CTGTTCATTAGAGTTCTTCCAGCCAAGACTCTGGGC...AGTGACAGTTGAAAGTGGTGGCATAGGACGGTAGGGTAGAAATTTGGGAGGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CCA 90 bp CCCAAATTTCTACCCTACCGTCCTATGCCACCACTTTCAACTGTCACTTTTAGTTCCTCCCCCTTTTTCTaGATGAAGGGAGACACCAGG +
Preference number: 4 (lower is better)
Translates to: PKFLPYRPMPPLSTVTFSSSPFF*MKGDTR
Trigger: CCTGGTGTCTCCCTTCATCCAGAAAAAGGGGGAGGA...ACTAAAAGTGACAGTTGAAAGTGGTGGCATAGGACGGTAGGGTAGAAATTTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR TCA 90 bp GCTGATAGAGTGGATTCTAGAAGTATGGACAGAGATACCCCATTTCTAGAATCCCTGGTTCTTGAGATGTaGGTGCTGCTCGCTCTAACG +
Preference number: 4 (lower is better)
Translates to: ADRVDSRSMDRDTPFLESLVLEM*VLLALT
Trigger: CGTTAGAGCGAGCAGCACTCACATCTCAAGAACCAG...GGATTCTAGAAATGGGGTATCTCTGTCCATACTTCTAGAATCCACTCTATCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280200.8
CDS-3UTR TCA 90 bp ACAAGGATGTATGAATTGCCAAGAGTTGGCAGCCATCTTGCCAACACAAGAGGACTTATGACCATGCCATaGGTAGGGCTGAAAATGGCT +
Preference number: 4 (lower is better)
Translates to: TRMYELPRVGSHLANTRGLMTMP*VGLKMA
Trigger: AGCCATTTTCAGCCCTACTCATGGCATGGTCATAAG...TCCTCTTGTGTTGGCAAGATGGCTGCCAACTCTTGGCAATTCATACATCCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR TCA 90 bp CTACTACATTTGCTCCTAAGGCTAGACCTGGGATGGCGGCAAGAATTCTATACATTGGGAACTTGGAGGTaGAATTTCTGCCATGGACCA +
Preference number: 4 (lower is better)
Translates to: LLHLLLRLDLGWRQEFYTLGTWR*NFCHGP
Trigger: TGGTCCATGGCAGAAATTTCACCTCCAAGTTCCCAA...TGTATAGAATTCTTGCCGCCATCCCAGGTCTAGCCTTAGGAGCAAATGTAGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR TCA 90 bp ATCCAACACTCTGGAAAGGGATTCAGAAGCCAGTTTATGCCCATACTTAATTCTGGCAGGTGGATCACCTaGGGTCCAGAGTTCAAGACA +
Preference number: 4 (lower is better)
Translates to: IQHSGKGFRSQFMPILNSGRWIT*GPEFKT
Trigger: TGTCTTGAACTCTGGACCTCAGGTGATCCACCTGCC...AGAATTAAGTATGGGCATAAACTGGCTTCTGAATCCCTTTCCAGAGTGTTGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR TCA 90 bp CCCAAATTTCTACCCTACCGTCCTATGCCACCACTTTCAACTGTCACTTTTAGTGGGCCTCCACTTATTTaGCCACAGGTAGAAGATTGG +
Preference number: 4 (lower is better)
Translates to: PKFLPYRPMPPLSTVTFSGPPLI*PQVEDW
Trigger: CCAATCTTCTACCTGTGGTCAAATAAGTGGAGGCCC...ACTAAAAGTGACAGTTGAAAGTGGTGGCATAGGACGGTAGGGTAGAAATTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR TCA 90 bp CTACTACATTTGCTCCTAAGGCTAGACCTGGGATGGCGGCAAGAATTCTATACAACCCCGAAGGAAGAATaGATGACTTTGAAGCTAGGC +
Preference number: 4 (lower is better)
Translates to: LLHLLLRLDLGWRQEFYTTPKEE*MTLKLG
Trigger: GCCTAGCTTCAAAGTCATTCATTCTTCCTTCGGGGT...TGTATAGAATTCTTGCCGCCATCCCAGGTCTAGCCTTAGGAGCAAATGTAGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR TCA 90 bp TGTTTCTATACACTAACAGCGAACAATCCTGTCTTTCTGGTGAGCGTTTCCTTGGAGGAGGATTCCATGTaGACGCCGATCAGCTTCCAT +
Preference number: 4 (lower is better)
Translates to: CFYTLTANNPVFLVSVSLEEDSM*TPISFH
Trigger: ATGGAAGCTGATCGGCGTTCACATGGAATCCTCCTC...CAAGGAAACGCTCACCAGAAAGACAGGATTGTTCGCTGTTAGTGTATAGAAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578928.1
CDS-3UTR GCA 90 bp CCAAAGCTTAATCTCCCCTGGATCATTCTGTTATATGATACAGTAAGTTTTCTTCACCCTCTTGGTCACTaGAAGCTCCCCGCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: PKLNLPWIILLYDTVSFLHPLGH*KLPAAP
Trigger: GGGAGCAGCGGGGAGCTTGCAGTGACCAAGAGGGTG...AAGAAAACTTACTGTATCATATAACAGAATGATCCAGGGGAGATTAAGCTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000581982.5
CDS-3UTR GCA 90 bp TTCCCTCCCAAATTTCTACCCTACCGTCCTATGCCACCACTTTCAACTGTCACTACGCTTCTTCCCATCTaGGTCTTGGTTAAGGACTTT +
Preference number: 4 (lower is better)
Translates to: FPPKFLPYRPMPPLSTVTTLLPI*VLVKDF
Trigger: AAAGTCCTTAACCAAGACGCAGATGGGAAGAAGCGT...AGTGACAGTTGAAAGTGGTGGCATAGGACGGTAGGGTAGAAATTTGGGAGGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000581982.5
CDS-3UTR GCA 90 bp TTCCCTCCCAAATTTCTACCCTACCGTCCTATGCCACCACTTTCAACTGTCACTTGCCATGGACCAAGTTaGAGTAAGTTAAGAGGTCGA +
Preference number: 4 (lower is better)
Translates to: FPPKFLPYRPMPPLSTVTCHGPS*SKLRGR
Trigger: TCGACCTCTTAACTTACTGCAACTTGGTCCATGGCA...AGTGACAGTTGAAAGTGGTGGCATAGGACGGTAGGGTAGAAATTTGGGAGGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR GCA 90 bp CTACTACATTTGCTCCTAAGGCTAGACCTGGGATGGCGGCAAGAATTCTATACATTCCGTGGCTGCAGTTaGTCACTATTTGTCTTGGGA +
Preference number: 4 (lower is better)
Translates to: LLHLLLRLDLGWRQEFYTFRGCS*SLFVLG
Trigger: TCCCAAGACAAATAGTGAGCAACTGCAGCCACGGAA...TGTATAGAATTCTTGCCGCCATCCCAGGTCTAGCCTTAGGAGCAAATGTAGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR GCA 90 bp TCCACTAGGTCCTGGGCTTTTCTTTGGTGGAAGACTTTTATTACTCCTTCAATCGGTTTCGTTTTCTCCTaGGCTGGCCTGCAAGTAGCA +
Preference number: 4 (lower is better)
Translates to: STRSWAFLWWKTFITPSIGFVFS*AGLQVA
Trigger: TGCTACTTGCAGGCCAGCGCAGGAGAAAACGAAACC...GATTGAAGGAGTAATAAAAGTCTTCCACCAAAGAAAAGCCCAGGACCTAGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000578928.1
CDS-3UTR GCA 90 bp GCTGATAGAGTGGATTCTAGAAGTATGGACAGAGATACCCCATTTCTAGAATCCGGTTTCGTTTTCTCCTaGGCTGGCCTGCAAGTAGCA +
Preference number: 4 (lower is better)
Translates to: ADRVDSRSMDRDTPFLESGFVFS*AGLQVA
Trigger: TGCTACTTGCAGGCCAGCGCAGGAGAAAACGAAACC...GGATTCTAGAAATGGGGTATCTCTGTCCATACTTCTAGAATCCACTCTATCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR GCA 90 bp TCTACCAGACAGAAACAAGGATGTATGAATTGCCAAGAGTTGGCAGCCATCTTGCACAAGAGGAAAGCCTaGATGAGAGTGAGGCCAAGA +
Preference number: 4 (lower is better)
Translates to: STRQKQGCMNCQELAAILHKRKA*MRVRPR
Trigger: TCTTGGCCTCACTCTCATGCAGGCTTTCCTCTTGTG...CAAGATGGCTGCCAACTCTTGGCAATTCATACATCCTTGTTTCTGTCTGGTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR GCA 90 bp CCCAAATTTCTACCCTACCGTCCTATGCCACCACTTTCAACTGTCACTTTTAGTTTCAAGCGATTCTTCTaGCTCAGCCTCCCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: PKFLPYRPMPPLSTVTFSFKRFF*LSLPSS
Trigger: GCTACTTGGGAGGCTGAGGCAGAAGAATCGCTTGAA...ACTAAAAGTGACAGTTGAAAGTGGTGGCATAGGACGGTAGGGTAGAAATTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR GCA 90 bp AGGAAAGCCTGCATGAGAGTGAGGCCAAGACCAGGGAAATGGATCCAACACTCTCATGGAAGATGTTGCTaGCATGCTTATAACAAGACA +
Preference number: 4 (lower is better)
Translates to: RKACMRVRPRPGKWIQHSHGRCC*HAYNKT
Trigger: TGTCTTGTTATAAGCATGGCAGCAACATCTTCCATG...AGAGTGTTGGATCCATTTCCCTGGTCTTGGCCTCACTCTCATGCAGGCTTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CCA 90 bp CCCAAATTTCTACCCTACCGTCCTATGCCACCACTTTCAACTGTCACTTTTAGTGTATCCTGTTTATCGTaGCCTCCTAGCCTCAACACC +
Preference number: 4 (lower is better)
Translates to: PKFLPYRPMPPLSTVTFSVSCLS*PPSLNT
Trigger: GGTGTTGAGGCTAGGAGGCCACGATAAACAGGATAC...ACTAAAAGTGACAGTTGAAAGTGGTGGCATAGGACGGTAGGGTAGAAATTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000581982.5
CDS-3UTR CCA 90 bp GCTGATAGAGTGGATTCTAGAAGTATGGACAGAGATACCCCATTTCTAGAATCCACGCTCCACCTTCCGTaGCTGCAGTTGCTCACTATT +
Preference number: 4 (lower is better)
Translates to: ADRVDSRSMDRDTPFLESTLHLP*LQLLTI
Trigger: AATAGTGAGCAACTGCAGCCACGGAAGGTGGAGCGT...GGATTCTAGAAATGGGGTATCTCTGTCCATACTTCTAGAATCCACTCTATCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR CCA 90 bp TTCCCTCCCAAATTTCTACCCTACCGTCCTATGCCACCACTTTCAACTGTCACTTGCCAGGTATTCTTCTaGACTATGCTGATAGAGTGG +
Preference number: 4 (lower is better)
Translates to: FPPKFLPYRPMPPLSTVTCQVFF*TMLIEW
Trigger: CCACTCTATCAGCATAGTCCAGAAGAATACCTGGCA...AGTGACAGTTGAAAGTGGTGGCATAGGACGGTAGGGTAGAAATTTGGGAGGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR CCA 90 bp CTACTACATTTGCTCCTAAGGCTAGACCTGGGATGGCGGCAAGAATTCTATACAAGGCTAGACCTGGGATaGCGGCAAGAATTCTATACA +
Preference number: 4 (lower is better)
Translates to: LLHLLLRLDLGWRQEFYTRLDLG*RQEFYT
Trigger: TGTATAGAATTCTTGCCGCCATCCCAGGTCTAGCCT...TGTATAGAATTCTTGCCGCCATCCCAGGTCTAGCCTTAGGAGCAAATGTAGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR CCA 90 bp AGGAAAGCCTGCATGAGAGTGAGGCCAAGACCAGGGAAATGGATCCAACACTCTAAGTTCCAAATGTTCTaGAGGCTTTGCAATACTGCA +
Preference number: 4 (lower is better)
Translates to: RKACMRVRPRPGKWIQHSKFQMF*RLCNTA
Trigger: TGCAGTATTGCAAAGCCTCCAGAACATTTGGAACTT...AGAGTGTTGGATCCATTTCCCTGGTCTTGGCCTCACTCTCATGCAGGCTTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CCA 90 bp CCCTACCGTCCTATGCCACCACTTTCAACTGTCACTTTTAGTGGTATATTATATCTCCATCGGGTGTCCTaGGAATTCTATGAGCCACCC +
Preference number: 4 (lower is better)
Translates to: PYRPMPPLSTVTFSGILYLHRVS*EFYEPP
Trigger: GGGTGGCTCATAGAATTCCCAGGACACCCGATGGAG...ATATAATATACCACTAAAAGTGACAGTTGAAAGTGGTGGCATAGGACGGTAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CCA 90 bp CCCAAATTTCTACCCTACCGTCCTATGCCACCACTTTCAACTGTCACTTTTAGTTGCCTCGTTTCCCACTaGAGTTGCCACATGTTGTGT +
Preference number: 4 (lower is better)
Translates to: PKFLPYRPMPPLSTVTFSCLVSH*SCHMLC
Trigger: ACACAACATGTGGCAACTCCAGTGGGAAACGAGGCA...ACTAAAAGTGACAGTTGAAAGTGGTGGCATAGGACGGTAGGGTAGAAATTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CCA 90 bp GGCCAAGACCAGGGAAATGGATCCAACACTCTGGAAAGGGATTCAGAAGCCAGTAATTATCAGTTGACTTaGAACCCCGAAGGAAGAATG +
Preference number: 4 (lower is better)
Translates to: GQDQGNGSNTLERDSEASNYQLT*NPEGRM
Trigger: CATTCTTCCTTCGGGGTTCCAAGTCAACTGATAATT...ACTGGCTTCTGAATCCCTTTCCAGAGTGTTGGATCCATTTCCCTGGTCTTGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CCA 90 bp CTACTACATTTGCTCCTAAGGCTAGACCTGGGATGGCGGCAAGAATTCTATACAAGTTGGGTGAATTGCTaGCATCTGTTTGTGGACTGG +
Preference number: 4 (lower is better)
Translates to: LLHLLLRLDLGWRQEFYTSWVNC*HLFVDW
Trigger: CCAGTCCACAAACAGATGCCAGCAATTCACCCAACT...TGTATAGAATTCTTGCCGCCATCCCAGGTCTAGCCTTAGGAGCAAATGTAGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR CAA 72 bp AAAACTATCATCTGGTCGAGGAGGGACATTTGTCAGTaGAAGTTCTTCAACGAGCCTGGAGGGAATGTCGCA +
Preference number: 4 (lower is better)
Translates to: KTIIWSRRDICQ*KFFNEPGGNVA
Trigger: TGCGACATTCCCTCCAGGCTCGTTGAAGAACTTCAACTGACAAATGTCCCTCCTCGACCAGATGATAGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR TCA 90 bp CTACTACATTTGCTCCTAAGGCTAGACCTGGGATGGCGGCAAGAATTCTATACACTTCTAACCATGCTCTaGATTGCCCAGTATTGTGCT +
Preference number: 4 (lower is better)
Translates to: LLHLLLRLDLGWRQEFYTLLTML*IAQYCA
Trigger: AGCACAATACTGGGCAATTCAGAGCATGGTTAGAAG...TGTATAGAATTCTTGCCGCCATCCCAGGTCTAGCCTTAGGAGCAAATGTAGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR TCA 90 bp ACAAGGATGTATGAATTGCCAAGAGTTGGCAGCCATCTTGCCAACACAAGAGGACTTCTAACCATGCTCTaGATTGCCCAGTATTGTGCT +
Preference number: 4 (lower is better)
Translates to: TRMYELPRVGSHLANTRGLLTML*IAQYCA
Trigger: AGCACAATACTGGGCAATTCAGAGCATGGTTAGAAG...TCCTCTTGTGTTGGCAAGATGGCTGCCAACTCTTGGCAATTCATACATCCTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR TCA 90 bp CTACTACATTTGCTCCTAAGGCTAGACCTGGGATGGCGGCAAGAATTCTATACACATGACAATGGTATCTaGCTATACTGTCCCTTCCAC +
Preference number: 4 (lower is better)
Translates to: LLHLLLRLDLGWRQEFYTHDNGI*LYCPFH
Trigger: GTGGAAGGGACAGTATAGTCAGATACCATTGTCATG...TGTATAGAATTCTTGCCGCCATCCCAGGTCTAGCCTTAGGAGCAAATGTAGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR TCA 90 bp GATTCAGAAGCCAGTTTATGCCCATACTTAATTCTAGACACAACATTTAAGCCCCCGAACGTGGGGTACTaGTGCTGCTCAGATTCACTG +
Preference number: 4 (lower is better)
Translates to: DSEASLCPYLILDTTFKPPNVGY*CCSDSL
Trigger: CAGTGAATCTGAGCAGCATCAGTACCCCACGTTCGG...GGGCTTAAATGTTGTGTCTAGAATTAAGTATGGGCATAAACTGGCTTCTGAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR TCA 90 bp AGGAAAGCCTGCATGAGAGTGAGGCCAAGACCAGGGAAATGGATCCAACACTCTGACACTAGAGGAATTTaGAGAAATTTAGCACCTATG +
Preference number: 4 (lower is better)
Translates to: RKACMRVRPRPGKWIQHSDTRGI*RNLAPM
Trigger: CATAGGTGCTAAATTTCTTCAAATTCCTCTAGTGTC...AGAGTGTTGGATCCATTTCCCTGGTCTTGGCCTCACTCTCATGCAGGCTTTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR TCA 90 bp GATTCAGAAGCCAGTTTATGCCCATACTTAATTCTAGACACAACATTTAAGCCCGTTTGTGGACTGGTGTaGGCAAGAAACCCATGGGGG +
Preference number: 4 (lower is better)
Translates to: DSEASLCPYLILDTTFKPVCGLV*ARNPWG
Trigger: CCCCCATGGGTTTCTTGCTCACACCAGTCCACAAAC...GGGCTTAAATGTTGTGTCTAGAATTAAGTATGGGCATAAACTGGCTTCTGAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR GCA 90 bp TCTGCCTTTAGTGTCATCATGTTAAGGCATGGAAGATGTTGCTGCCATGCTTATATGGCTATGGAATCCTaGTGGGTCCCGATCTTGAAC +
Preference number: 4 (lower is better)
Translates to: SAFSVIMLRHGRCCCHAYMAMES*WVPILN
Trigger: GTTCAAGATCGGGACCCAGCAGGATTCCATAGCCAT...ATAAGCATGGCAGCAACATCTTCCATGCCTTAACATGATGACACTAAAGGCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR GCA 90 bp TCTACCAGACAGAAACAAGGATGTATGAATTGCCAAGAGTTGGCAGCCATCTTGTTCCGTGGCTGCAGTTaGTCACTATTTGTCTTGGGA +
Preference number: 4 (lower is better)
Translates to: STRQKQGCMNCQELAAILFRGCS*SLFVLG
Trigger: TCCCAAGACAAATAGTGAGCAACTGCAGCCACGGAA...CAAGATGGCTGCCAACTCTTGGCAATTCATACATCCTTGTTTCTGTCTGGTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR GCA 90 bp TCTGCCTTTAGTGTCATCATGTTAAGGCATGGAAGATGTTGCTGCCATGCTTATTCCACCTTCCGTGGCTaGAGTTGCTCACTATTTGTC +
Preference number: 4 (lower is better)
Translates to: SAFSVIMLRHGRCCCHAYSTFRG*SCSLFV
Trigger: GACAAATAGTGAGCAACTGCAGCCACGGAAGGTGGA...ATAAGCATGGCAGCAACATCTTCCATGCCTTAACATGATGACACTAAAGGCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR GCA 90 bp TTCCCTCCCAAATTTCTACCCTACCGTCCTATGCCACCACTTTCAACTGTCACTTCTATAGTTATTGGGTaGCTTCTGTGTATCCCAGGA +
Preference number: 4 (lower is better)
Translates to: FPPKFLPYRPMPPLSTVTSIVIG*LLCIPG
Trigger: TCCTGGGATACACAGAAGGCACCCAATAACTATAGA...AGTGACAGTTGAAAGTGGTGGCATAGGACGGTAGGGTAGAAATTTGGGAGGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR GCA 90 bp TCTACCAGACAGAAACAAGGATGTATGAATTGCCAAGAGTTGGCAGCCATCTTGCTGGTAAATAGCCCTTaGCCAAAGCTTAATCTCCCC +
Preference number: 4 (lower is better)
Translates to: STRQKQGCMNCQELAAILLVNSP*PKLNLP
Trigger: GGGGAGATTAAGCTTTGGGCAAGGGCTATTTACCAG...CAAGATGGCTGCCAACTCTTGGCAATTCATACATCCTTGTTTCTGTCTGGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR GCA 90 bp ACAAGGATGTATGAATTGCCAAGAGTTGGCAGCCATCTTGCCAACACAAGAGGAAATTGCCCAGTATTGTaGTTTGACCCTGCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: TRMYELPRVGSHLANTRGNCPVL*FDPASQ
Trigger: CTGAGAAGCAGGGTCAAAGCACAATACTGGGCAATT...TCCTCTTGTGTTGGCAAGATGGCTGCCAACTCTTGGCAATTCATACATCCTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR GCA 90 bp ACAAGGATGTATGAATTGCCAAGAGTTGGCAGCCATCTTGCCAACACAAGAGGAGTTTCCCACTGGAGTTaGCACATGTTGTGTTTTGCA +
Preference number: 4 (lower is better)
Translates to: TRMYELPRVGSHLANTRGVSHWS*HMLCFA
Trigger: TGCAAAACACAACATGTGGCAACTCCAGTGGGAAAC...TCCTCTTGTGTTGGCAAGATGGCTGCCAACTCTTGGCAATTCATACATCCTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR GCA 90 bp CTACTACATTTGCTCCTAAGGCTAGACCTGGGATGGCGGCAAGAATTCTATACACGAAGCCCAAATTGTTaGTTTCTGCAGGAAACGAGT +
Preference number: 4 (lower is better)
Translates to: LLHLLLRLDLGWRQEFYTRSPNC*FLQETS
Trigger: ACTCGTTTCCTGCAGAAAGCAACAATTTGGGCTTCG...TGTATAGAATTCTTGCCGCCATCCCAGGTCTAGCCTTAGGAGCAAATGTAGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CCA 90 bp AGGAAAGCCTGCATGAGAGTGAGGCCAAGACCAGGGAAATGGATCCAACACTCTTCTGCGAGAGAAGGTTaGATAGTTGACATAAATATC +
Preference number: 4 (lower is better)
Translates to: RKACMRVRPRPGKWIQHSSAREG*IVDINI
Trigger: GATATTTATGTCAACTATCCAACCTTCTCTCGCAGA...AGAGTGTTGGATCCATTTCCCTGGTCTTGGCCTCACTCTCATGCAGGCTTTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR CCA 90 bp AGGAAAGCCTGCATGAGAGTGAGGCCAAGACCAGGGAAATGGATCCAACACTCTACTATGCTGATAGAGTaGATTCTAGAAGTATGGACA +
Preference number: 4 (lower is better)
Translates to: RKACMRVRPRPGKWIQHSTMLIE*ILEVWT
Trigger: TGTCCATACTTCTAGAATCCACTCTATCAGCATAGT...AGAGTGTTGGATCCATTTCCCTGGTCTTGGCCTCACTCTCATGCAGGCTTTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR CCA 90 bp CCCAAATTTCTACCCTACCGTCCTATGCCACCACTTTCAACTGTCACTTTTAGTGCCCAGAGTCTTGGCTaGAAGAACTCTAATGAACAG +
Preference number: 4 (lower is better)
Translates to: PKFLPYRPMPPLSTVTFSAQSLG*KNSNEQ
Trigger: CTGTTCATTAGAGTTCTTCCAGCCAAGACTCTGGGC...ACTAAAAGTGACAGTTGAAAGTGGTGGCATAGGACGGTAGGGTAGAAATTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CCA 90 bp CCCTACCGTCCTATGCCACCACTTTCAACTGTCACTTTTAGTGGTATATTATATGTTCTTCAACGAGCCTaGAGGGAATGTCGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: PYRPMPPLSTVTFSGILYVLQRA*RECRSV
Trigger: CACACTGCGACATTCCCTCCAGGCTCGTTGAAGAAC...ATATAATATACCACTAAAAGTGACAGTTGAAAGTGGTGGCATAGGACGGTAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CCA 90 bp CTACTACATTTGCTCCTAAGGCTAGACCTGGGATGGCGGCAAGAATTCTATACAAATGCTTTACTTCTGTaGCTCCTCTTACCCATGGAG +
Preference number: 4 (lower is better)
Translates to: LLHLLLRLDLGWRQEFYTNALLL*LLLPME
Trigger: CTCCATGGGTAAGAGGAGCCACAGAAGTAAAGCATT...TGTATAGAATTCTTGCCGCCATCCCAGGTCTAGCCTTAGGAGCAAATGTAGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR TCA 90 bp CTCAGAAAACTTAGTATCACTGAGAGTATATTGGAGAGCTCAAAGTCTTACTCAGCTGGGTCCCGATCTTaGACCACTCCACCTGTGTTA +
Preference number: 4 (lower is better)
Translates to: LRKLSITESILESSKSYSAGSRS*TTPPVL
Trigger: TAACACAGGTGGAGTGGTTCAAGATCGGGACCCAGC...TGAGTAAGACTTTGAGCTCTCCAATATACTCTCAGTGATACTAAGTTTTCTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR TCA 90 bp GCTGATAGAGTGGATTCTAGAAGTATGGACAGAGATACCCCATTTCTAGAATCCCTTATGACCATGCCATaGGTAGGGCTGAAAATGGCT +
Preference number: 4 (lower is better)
Translates to: ADRVDSRSMDRDTPFLESLMTMP*VGLKMA
Trigger: AGCCATTTTCAGCCCTACTCATGGCATGGTCATAAG...GGATTCTAGAAATGGGGTATCTCTGTCCATACTTCTAGAATCCACTCTATCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR TCA 90 bp AATCAGAATCATAGGTGCAAAAGAGTAGAGGGGGAGAAACATACACTAGGGAGAGTCCTGGGAATTCTATaGGCCACCCCTATGTTCAAA +
Preference number: 4 (lower is better)
Translates to: NQNHRCKRVEGEKHTLGRVLGIL*ATPMFK
Trigger: TTTGAACATAGGGGTGGCTCATAGAATTCCCAGGAC...TCTCCCTAGTGTATGTTTCTCCCCCTCTACTCTTTTGCACCTATGATTCTGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR TCA 90 bp AATCAGAATCATAGGTGCAAAAGAGTAGAGGGGGAGAAACATACACTAGGGAGAGGGACATTTGTCAGTTaGAGTTCTTCAACGAGCCTG +
Preference number: 4 (lower is better)
Translates to: NQNHRCKRVEGEKHTLGRGTFVS*SSSTSL
Trigger: CAGGCTCGTTGAAGAACTTCAACTGACAAATGTCCC...TCTCCCTAGTGTATGTTTCTCCCCCTCTACTCTTTTGCACCTATGATTCTGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR TCA 90 bp GCTGATAGAGTGGATTCTAGAAGTATGGACAGAGATACCCCATTTCTAGAATCCACCCCGAAGGAAGAATaGATGACTTTGAAGCTAGGC +
Preference number: 4 (lower is better)
Translates to: ADRVDSRSMDRDTPFLESTPKEE*MTLKLG
Trigger: GCCTAGCTTCAAAGTCATTCATTCTTCCTTCGGGGT...GGATTCTAGAAATGGGGTATCTCTGTCCATACTTCTAGAATCCACTCTATCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR TCA 90 bp GCTGATAGAGTGGATTCTAGAAGTATGGACAGAGATACCCCATTTCTAGAATCCGACAGAAAGTCTCTCTaGAGAGGAGCACTTAGGGAA +
Preference number: 4 (lower is better)
Translates to: ADRVDSRSMDRDTPFLESDRKSL*RGALRE
Trigger: TTCCCTAAGTGCTCCTCTTCAGAGAGACTTTCTGTC...GGATTCTAGAAATGGGGTATCTCTGTCCATACTTCTAGAATCCACTCTATCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR TCA 90 bp CCCAAATTTCTACCCTACCGTCCTATGCCACCACTTTCAACTGTCACTTTTAGTGAGAGGGACATCCATTaGGAAATAAGCCATGAACCT +
Preference number: 4 (lower is better)
Translates to: PKFLPYRPMPPLSTVTFSERDIH*EISHEP
Trigger: AGGTTCATGGCTTATTTCTCAATGGATGTCCCTCTC...ACTAAAAGTGACAGTTGAAAGTGGTGGCATAGGACGGTAGGGTAGAAATTTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR GCA 90 bp TCTACCAGACAGAAACAAGGATGTATGAATTGCCAAGAGTTGGCAGCCATCTTGACGCTTCTTCCCATCTaGGTCTTGGTTAAGGACTTT +
Preference number: 4 (lower is better)
Translates to: STRQKQGCMNCQELAAILTLLPI*VLVKDF
Trigger: AAAGTCCTTAACCAAGACGCAGATGGGAAGAAGCGT...CAAGATGGCTGCCAACTCTTGGCAATTCATACATCCTTGTTTCTGTCTGGTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000581982.5
CDS-3UTR GCA 90 bp TCTACCAGACAGAAACAAGGATGTATGAATTGCCAAGAGTTGGCAGCCATCTTGCCACCTGTGTTAAGATaGCCATTGATGGATACACAC +
Preference number: 4 (lower is better)
Translates to: STRQKQGCMNCQELAAILPPVLR*PLMDTH
Trigger: GTGTGTATCCATCAATGGGCATCTTAACACAGGTGG...CAAGATGGCTGCCAACTCTTGGCAATTCATACATCCTTGTTTCTGTCTGGTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR GCA 90 bp ACAAGGATGTATGAATTGCCAAGAGTTGGCAGCCATCTTGCCAACACAAGAGGATCTATAGTTATTGGGTaGCTTCTGTGTATCCCAGGA +
Preference number: 4 (lower is better)
Translates to: TRMYELPRVGSHLANTRGSIVIG*LLCIPG
Trigger: TCCTGGGATACACAGAAGGCACCCAATAACTATAGA...TCCTCTTGTGTTGGCAAGATGGCTGCCAACTCTTGGCAATTCATACATCCTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR GCA 90 bp AATCAGAATCATAGGTGCAAAAGAGTAGAGGGGGAGAAACATACACTAGGGAGACTGGTAAATAGCCCTTaGCCAAAGCTTAATCTCCCC +
Preference number: 4 (lower is better)
Translates to: NQNHRCKRVEGEKHTLGRLVNSP*PKLNLP
Trigger: GGGGAGATTAAGCTTTGGGCAAGGGCTATTTACCAG...TCTCCCTAGTGTATGTTTCTCCCCCTCTACTCTTTTGCACCTATGATTCTGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR GCA 90 bp CCCTACCGTCCTATGCCACCACTTTCAACTGTCACTTTTAGTGGTATATTATATCACAAGAGGAAAGCCTaGATGAGAGTGAGGCCAAGA +
Preference number: 4 (lower is better)
Translates to: PYRPMPPLSTVTFSGILYHKRKA*MRVRPR
Trigger: TCTTGGCCTCACTCTCATGCAGGCTTTCCTCTTGTG...ATATAATATACCACTAAAAGTGACAGTTGAAAGTGGTGGCATAGGACGGTAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR GCA 90 bp CTACTACATTTGCTCCTAAGGCTAGACCTGGGATGGCGGCAAGAATTCTATACACAGTATCTGTTTTCGTaGTTACAACCAATACCCCCA +
Preference number: 4 (lower is better)
Translates to: LLHLLLRLDLGWRQEFYTQYLFS*LQPIPP
Trigger: TGGGGGTATTGGTTGTAAGCACGAAAACAGATACTG...TGTATAGAATTCTTGCCGCCATCCCAGGTCTAGCCTTAGGAGCAAATGTAGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR GCA 90 bp AGATCCATGCATGAGTACATAAGAGTCATTACTAATGCACTCATGTCAAGAATATTGCCCAGGGTGGAGTaGAGTGGTGCGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: RSMHEYIRVITNALMSRILPRVE*SGAILA
Trigger: AGCCAAGATCGCACCACTGCACTCCACCCTGGGCAA...TATTCTTGACATGAGTGCATTAGTAATGACTCTTATGTACTCATGCATGGATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR GCA 90 bp GCTGATAGAGTGGATTCTAGAAGTATGGACAGAGATACCCCATTTCTAGAATCCCCACATGTTGTGTTTTaGAAGCCTACTCCATCGGGT +
Preference number: 4 (lower is better)
Translates to: ADRVDSRSMDRDTPFLESPHVVF*KPTPSG
Trigger: ACCCGATGGAGTAGGCTTGCAAAACACAACATGTGG...GGATTCTAGAAATGGGGTATCTCTGTCCATACTTCTAGAATCCACTCTATCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR GCA 90 bp GGCCAAGACCAGGGAAATGGATCCAACACTCTGGAAAGGGATTCAGAAGCCAGTGTAGAAGATTGGCTCTaGTTTCTTCCTGTAATAATA +
Preference number: 4 (lower is better)
Translates to: GQDQGNGSNTLERDSEASVEDWL*FLPVII
Trigger: TATTATTACAGGAAGAAAGCAGAGCCAATCTTCTAC...ACTGGCTTCTGAATCCCTTTCCAGAGTGTTGGATCCATTTCCCTGGTCTTGGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR GCA 90 bp AGGAAAGCCTGCATGAGAGTGAGGCCAAGACCAGGGAAATGGATCCAACACTCTGTAGAAGATTGGCTCTaGTTTCTTCCTGTAATAATA +
Preference number: 4 (lower is better)
Translates to: RKACMRVRPRPGKWIQHSVEDWL*FLPVII
Trigger: TATTATTACAGGAAGAAAGCAGAGCCAATCTTCTAC...AGAGTGTTGGATCCATTTCCCTGGTCTTGGCCTCACTCTCATGCAGGCTTTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR GCA 90 bp TCTACCAGACAGAAACAAGGATGTATGAATTGCCAAGAGTTGGCAGCCATCTTGGTAAGTTGGGTGAATTaGTGGCATCTGTTTGTGGAC +
Preference number: 4 (lower is better)
Translates to: STRQKQGCMNCQELAAILVSWVN*WHLFVD
Trigger: GTCCACAAACAGATGCCAGCAATTCACCCAACTTAC...CAAGATGGCTGCCAACTCTTGGCAATTCATACATCCTTGTTTCTGTCTGGTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR GCA 90 bp TTCCCTCCCAAATTTCTACCCTACCGTCCTATGCCACCACTTTCAACTGTCACTCATGGAAGATGTTGCTaGCATGCTTATAACAAGACA +
Preference number: 4 (lower is better)
Translates to: FPPKFLPYRPMPPLSTVTHGRCC*HAYNKT
Trigger: TGTCTTGTTATAAGCATGGCAGCAACATCTTCCATG...AGTGACAGTTGAAAGTGGTGGCATAGGACGGTAGGGTAGAAATTTGGGAGGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR GCA 90 bp GGCCAAGACCAGGGAAATGGATCCAACACTCTGGAAAGGGATTCAGAAGCCAGTTCTCCTTGTGGCTTGTaGTACAAATTTTCCTTATTA +
Preference number: 4 (lower is better)
Translates to: GQDQGNGSNTLERDSEASSPCGL*YKFSLL
Trigger: TAATAAGGAAAATTTGTAGCACAAGCCACAAGGAGA...ACTGGCTTCTGAATCCCTTTCCAGAGTGTTGGATCCATTTCCCTGGTCTTGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR GCA 90 bp GCTGATAGAGTGGATTCTAGAAGTATGGACAGAGATACCCCATTTCTAGAATCCAGATCCCCAGCACAATaGAGTTTCCTTCCTCTCAGA +
Preference number: 4 (lower is better)
Translates to: ADRVDSRSMDRDTPFLESRSPAQ*SFLPLR
Trigger: TCTGAGAGGAAGGAAACTGCATTGTGCTGGGGATCT...GGATTCTAGAAATGGGGTATCTCTGTCCATACTTCTAGAATCCACTCTATCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582621.6
CDS-3UTR CCA 90 bp AATCAGAATCATAGGTGCAAAAGAGTAGAGGGGGAGAAACATACACTAGGGAGACTGCCAAGTTCCCTGTaGGTAAGTGTAAAGAGAGCA +
Preference number: 4 (lower is better)
Translates to: NQNHRCKRVEGEKHTLGRLPSSL*VSVKRA
Trigger: TGCTCTCTTTACACTTACCCACAGGGAACTTGGCAG...TCTCCCTAGTGTATGTTTCTCCCCCTCTACTCTTTTGCACCTATGATTCTGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CCA 90 bp AGATCCATGCATGAGTACATAAGAGTCATTACTAATGCACTCATGTCAAGAATACGTTTTCTCCTGCGCTaGCCTGCAAGTAGCAGCGGT +
Preference number: 4 (lower is better)
Translates to: RSMHEYIRVITNALMSRIRFLLR*PASSSG
Trigger: ACCGCTGCTACTTGCAGGCCAGCGCAGGAGAAAACG...TATTCTTGACATGAGTGCATTAGTAATGACTCTTATGTACTCATGCATGGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280200.8
ENST00000577287.5
ENST00000581982.5
ENST00000582621.6
CDS-3UTR CCA 90 bp TCTACCAGACAGAAACAAGGATGTATGAATTGCCAAGAGTTGGCAGCCATCTTGATGGATCCAACACTCTaGAAAGGGATTCAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: STRQKQGCMNCQELAAILMDPTL*KGIQKP
Trigger: TGGCTTCTGAATCCCTTTCCAGAGTGTTGGATCCAT...CAAGATGGCTGCCAACTCTTGGCAATTCATACATCCTTGTTTCTGTCTGGTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR CCA 90 bp AATCAGAATCATAGGTGCAAAAGAGTAGAGGGGGAGAAACATACACTAGGGAGAAGGCTAGACCTGGGATaGCGGCAAGAATTCTATACA +
Preference number: 4 (lower is better)
Translates to: NQNHRCKRVEGEKHTLGRRLDLG*RQEFYT
Trigger: TGTATAGAATTCTTGCCGCCATCCCAGGTCTAGCCT...TCTCCCTAGTGTATGTTTCTCCCCCTCTACTCTTTTGCACCTATGATTCTGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CCA 90 bp CCCAAATTTCTACCCTACCGTCCTATGCCACCACTTTCAACTGTCACTTTTAGTAGGAAGCAATACCACTaGAGAAGCTCTGTGAATGTC +
Preference number: 4 (lower is better)
Translates to: PKFLPYRPMPPLSTVTFSRKQYH*RSSVNV
Trigger: GACATTCACAGAGCTTCTCCAGTGGTATTGCTTCCT...ACTAAAAGTGACAGTTGAAAGTGGTGGCATAGGACGGTAGGGTAGAAATTTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CCA 90 bp CCCAAATTTCTACCCTACCGTCCTATGCCACCACTTTCAACTGTCACTTTTAGTCATCTGTTTGTGGACTaGTGTGAGCAAGAAACCCAT +
Preference number: 4 (lower is better)
Translates to: PKFLPYRPMPPLSTVTFSHLFVD*CEQETH
Trigger: ATGGGTTTCTTGCTCACACCAGTCCACAAACAGATG...ACTAAAAGTGACAGTTGAAAGTGGTGGCATAGGACGGTAGGGTAGAAATTTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CCA 90 bp AGGAAAGCCTGCATGAGAGTGAGGCCAAGACCAGGGAAATGGATCCAACACTCTATAACAAGACAAAGCTaGAAAGTTGGAAAGCTGAAA +
Preference number: 4 (lower is better)
Translates to: RKACMRVRPRPGKWIQHSITRQS*KVGKLK
Trigger: TTTCAGCTTTCCAACTTTCCAGCTTTGTCTTGTTAT...AGAGTGTTGGATCCATTTCCCTGGTCTTGGCCTCACTCTCATGCAGGCTTTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CCA 90 bp CCCTACCGTCCTATGCCACCACTTTCAACTGTCACTTTTAGTGGTATATTATATAAGGTGGTGCATGCATaGAGCAGAGAAGTCCTCACT +
Preference number: 4 (lower is better)
Translates to: PYRPMPPLSTVTFSGILYKVVHA*SREVLT
Trigger: AGTGAGGACTTCTCTGCTCCATGCATGCACCACCTT...ATATAATATACCACTAAAAGTGACAGTTGAAAGTGGTGGCATAGGACGGTAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582621.6
3UTR CAA 72 bp CAAACTCTCTACCAGACAGAAACAAGGATGTATGAATaGCCAAGAGTTGGCAGCCATCTTGCCAACACAAGA +
Preference number: 4 (lower is better)
Translates to: QTLYQTETRMYE*PRVGSHLANTR
Trigger: TCTTGTGTTGGCAAGATGGCTGCCAACTCTTGGCAATTCATACATCCTTGTTTCTGTCTGGTAGAGAGTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
3UTR CAA 72 bp CAAGCTTCTAATGGAGTCTTTCTAAGGAAGTTGACGTaGGTAGAATTCCTGCTGCATCACAGGGGAGTTTCA +
Preference number: 4 (lower is better)
Translates to: QASNGVFLRKLT*VEFLLHHRGVS
Trigger: TGAAACTCCCCTGTGATGCAGCAGGAATTCTACCAACGTCAACTTCCTTAGAAAGACTCCATTAGAAGCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR TCA 90 bp TTCCCTCCCAAATTTCTACCCTACCGTCCTATGCCACCACTTTCAACTGTCACTAGAAGGTTGGATAGTTaGCATAAATATCCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: FPPKFLPYRPMPPLSTVTRRLDS*HKYPLL
Trigger: CAAGAGAGGATATTTATGTCAACTATCCAACCTTCT...AGTGACAGTTGAAAGTGGTGGCATAGGACGGTAGGGTAGAAATTTGGGAGGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR TCA 90 bp CCCAAATTTCTACCCTACCGTCCTATGCCACCACTTTCAACTGTCACTTTTAGTAGTCAGTCCCCAGAATaGCAATTATTAGCTCTAGGT +
Preference number: 4 (lower is better)
Translates to: PKFLPYRPMPPLSTVTFSSQSPE*QLLALG
Trigger: ACCTAGAGCTAATAATTGTCATTCTGGGGACTGACT...ACTAAAAGTGACAGTTGAAAGTGGTGGCATAGGACGGTAGGGTAGAAATTTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR GCA 90 bp GCTGATAGAGTGGATTCTAGAAGTATGGACAGAGATACCCCATTTCTAGAATCCTGCCATGGACCAAGTTaGAGTAAGTTAAGAGGTCGA +
Preference number: 4 (lower is better)
Translates to: ADRVDSRSMDRDTPFLESCHGPS*SKLRGR
Trigger: TCGACCTCTTAACTTACTGCAACTTGGTCCATGGCA...GGATTCTAGAAATGGGGTATCTCTGTCCATACTTCTAGAATCCACTCTATCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR GCA 90 bp GATTCAGAAGCCAGTTTATGCCCATACTTAATTCTAGACACAACATTTAAGCCCCACAAGAGGAAAGCCTaGATGAGAGTGAGGCCAAGA +
Preference number: 4 (lower is better)
Translates to: DSEASLCPYLILDTTFKPHKRKA*MRVRPR
Trigger: TCTTGGCCTCACTCTCATGCAGGCTTTCCTCTTGTG...GGGCTTAAATGTTGTGTCTAGAATTAAGTATGGGCATAAACTGGCTTCTGAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR GCA 90 bp TCTACCAGACAGAAACAAGGATGTATGAATTGCCAAGAGTTGGCAGCCATCTTGAATCAGAATCATAGGTaGAAAAGAGTAGAGGGGGAG +
Preference number: 4 (lower is better)
Translates to: STRQKQGCMNCQELAAILNQNHR*KRVEGE
Trigger: CTCCCCCTCTACTCTTTTGCACCTATGATTCTGATT...CAAGATGGCTGCCAACTCTTGGCAATTCATACATCCTTGTTTCTGTCTGGTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR GCA 90 bp GCTGATAGAGTGGATTCTAGAAGTATGGACAGAGATACCCCATTTCTAGAATCCGTTTCCCACTGGAGTTaGCACATGTTGTGTTTTGCA +
Preference number: 4 (lower is better)
Translates to: ADRVDSRSMDRDTPFLESVSHWS*HMLCFA
Trigger: TGCAAAACACAACATGTGGCAACTCCAGTGGGAAAC...GGATTCTAGAAATGGGGTATCTCTGTCCATACTTCTAGAATCCACTCTATCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR GCA 90 bp TCTGCCTTTAGTGTCATCATGTTAAGGCATGGAAGATGTTGCTGCCATGCTTATCGAAGCCCAAATTGTTaGTTTCTGCAGGAAACGAGT +
Preference number: 4 (lower is better)
Translates to: SAFSVIMLRHGRCCCHAYRSPNC*FLQETS
Trigger: ACTCGTTTCCTGCAGAAAGCAACAATTTGGGCTTCG...ATAAGCATGGCAGCAACATCTTCCATGCCTTAACATGATGACACTAAAGGCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR GCA 90 bp GCTGATAGAGTGGATTCTAGAAGTATGGACAGAGATACCCCATTTCTAGAATCCGGGGGAGATACAAGCTaGTGCCTTCCAGATATATTT +
Preference number: 4 (lower is better)
Translates to: ADRVDSRSMDRDTPFLESGGDTS*CLPDIF
Trigger: AAATATATCTGGAAGGCAGCAGCTTGTATCTCCCCC...GGATTCTAGAAATGGGGTATCTCTGTCCATACTTCTAGAATCCACTCTATCAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR GCA 90 bp GCTGATAGAGTGGATTCTAGAAGTATGGACAGAGATACCCCATTTCTAGAATCCGCTTGTGAAATCTGGTaGTTTAGACTGAGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: ADRVDSRSMDRDTPFLESACEIW*FRLSSV
Trigger: CACAGAGCTCAGTCTAAAGCACCAGATTTCACAAGC...GGATTCTAGAAATGGGGTATCTCTGTCCATACTTCTAGAATCCACTCTATCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR GCA 90 bp AATCAGAATCATAGGTGCAAAAGAGTAGAGGGGGAGAAACATACACTAGGGAGATCCACAAACAAACGTTaGATAAAAGGCCTCAGGACG +
Preference number: 4 (lower is better)
Translates to: NQNHRCKRVEGEKHTLGRSTNKR*IKGLRT
Trigger: CGTCCTGAGGCCTTTTATGCAACGTTTGTTTGTGGA...TCTCCCTAGTGTATGTTTCTCCCCCTCTACTCTTTTGCACCTATGATTCTGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CCA 90 bp CTCAGAAAACTTAGTATCACTGAGAGTATATTGGAGAGCTCAAAGTCTTACTCAGCTATGGAATCCTGCTaGGTCCCGATCTTGAACCAC +
Preference number: 4 (lower is better)
Translates to: LRKLSITESILESSKSYSAMESC*VPILNH
Trigger: GTGGTTCAAGATCGGGACCCAGCAGGATTCCATAGC...TGAGTAAGACTTTGAGCTCTCCAATATACTCTCAGTGATACTAAGTTTTCTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CCA 90 bp CCCAAATTTCTACCCTACCGTCCTATGCCACCACTTTCAACTGTCACTTTTAGTGACTTCTATAGTTATTaGGTGCCTTCTGTGTATCCC +
Preference number: 4 (lower is better)
Translates to: PKFLPYRPMPPLSTVTFSDFYSY*VPSVYP
Trigger: GGGATACACAGAAGGCACCCAATAACTATAGAAGTC...ACTAAAAGTGACAGTTGAAAGTGGTGGCATAGGACGGTAGGGTAGAAATTTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR CCA 90 bp TTCCCTCCCAAATTTCTACCCTACCGTCCTATGCCACCACTTTCAACTGTCACTTCTGCGAGAGAAGGTTaGATAGTTGACATAAATATC +
Preference number: 4 (lower is better)
Translates to: FPPKFLPYRPMPPLSTVTSAREG*IVDINI
Trigger: GATATTTATGTCAACTATCCAACCTTCTCTCGCAGA...AGTGACAGTTGAAAGTGGTGGCATAGGACGGTAGGGTAGAAATTTGGGAGGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR CCA 90 bp CTACTACATTTGCTCCTAAGGCTAGACCTGGGATGGCGGCAAGAATTCTATACACCATTCCATCCTTTCTaGTCATGTTGCCTATTTAAC +
Preference number: 4 (lower is better)
Translates to: LLHLLLRLDLGWRQEFYTPFHPF*SCCLFN
Trigger: GTTAAATAGGCAACATGACCAGAAAGGATGGAATGG...TGTATAGAATTCTTGCCGCCATCCCAGGTCTAGCCTTAGGAGCAAATGTAGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR CCA 90 bp ACAAGGATGTATGAATTGCCAAGAGTTGGCAGCCATCTTGCCAACACAAGAGGACCATTCCATCCTTTCTaGTCATGTTGCCTATTTAAC +
Preference number: 4 (lower is better)
Translates to: TRMYELPRVGSHLANTRGPFHPF*SCCLFN
Trigger: GTTAAATAGGCAACATGACCAGAAAGGATGGAATGG...TCCTCTTGTGTTGGCAAGATGGCTGCCAACTCTTGGCAATTCATACATCCTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR CCA 90 bp CTACTACATTTGCTCCTAAGGCTAGACCTGGGATGGCGGCAAGAATTCTATACATGGATTCTAGAAGTATaGACAGAGATACCCCATTTC +
Preference number: 4 (lower is better)
Translates to: LLHLLLRLDLGWRQEFYTWILEV*TEIPHF
Trigger: GAAATGGGGTATCTCTGTCCATACTTCTAGAATCCA...TGTATAGAATTCTTGCCGCCATCCCAGGTCTAGCCTTAGGAGCAAATGTAGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR CCA 90 bp ACAAGGATGTATGAATTGCCAAGAGTTGGCAGCCATCTTGCCAACACAAGAGGATGGATTCTAGAAGTATaGACAGAGATACCCCATTTC +
Preference number: 4 (lower is better)
Translates to: TRMYELPRVGSHLANTRGWILEV*TEIPHF
Trigger: GAAATGGGGTATCTCTGTCCATACTTCTAGAATCCA...TCCTCTTGTGTTGGCAAGATGGCTGCCAACTCTTGGCAATTCATACATCCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR CCA 90 bp TCTGCCTTTAGTGTCATCATGTTAAGGCATGGAAGATGTTGCTGCCATGCTTATTGCCAGGTATTCTTCTaGACTATGCTGATAGAGTGG +
Preference number: 4 (lower is better)
Translates to: SAFSVIMLRHGRCCCHAYCQVFF*TMLIEW
Trigger: CCACTCTATCAGCATAGTCCAGAAGAATACCTGGCA...ATAAGCATGGCAGCAACATCTTCCATGCCTTAACATGATGACACTAAAGGCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CCA 90 bp AATCAGAATCATAGGTGCAAAAGAGTAGAGGGGGAGAAACATACACTAGGGAGATGCCAGGTATTCTTCTaGACTATGCTGATAGAGTGG +
Preference number: 4 (lower is better)
Translates to: NQNHRCKRVEGEKHTLGRCQVFF*TMLIEW
Trigger: CCACTCTATCAGCATAGTCCAGAAGAATACCTGGCA...TCTCCCTAGTGTATGTTTCTCCCCCTCTACTCTTTTGCACCTATGATTCTGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CCA 90 bp CCAAAGCTTAATCTCCCCTGGATCATTCTGTTATATGATACAGTAAGTTTTCTTAGGGAGACACCAGGATaGCAGTTGTGTGCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: PKLNLPWIILLYDTVSFLRETPG*QLCASP
Trigger: AGGAGAGGCACACAACTGCCATCCTGGTGTCTCCCT...AAGAAAACTTACTGTATCATATAACAGAATGATCCAGGGGAGATTAAGCTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CCA 90 bp AAGTATGGACAGAGATACCCCATTTCTAGAATCCATCCCATATTTCACTTTTTACTCCATCGGGTGTCCTaGGAATTCTATGAGCCACCC +
Preference number: 4 (lower is better)
Translates to: KYGQRYPISRIHPIFHFLLHRVS*EFYEPP
Trigger: GGGTGGCTCATAGAATTCCCAGGACACCCGATGGAG...TAAAAAGTGAAATATGGGATGGATTCTAGAAATGGGGTATCTCTGTCCATACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CCA 90 bp GATTCAGAAGCCAGTTTATGCCCATACTTAATTCTAGACACAACATTTAAGCCCTGCCTCGTTTCCCACTaGAGTTGCCACATGTTGTGT +
Preference number: 4 (lower is better)
Translates to: DSEASLCPYLILDTTFKPCLVSH*SCHMLC
Trigger: ACACAACATGTGGCAACTCCAGTGGGAAACGAGGCA...GGGCTTAAATGTTGTGTCTAGAATTAAGTATGGGCATAAACTGGCTTCTGAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CCA 90 bp CCAAAGCTTAATCTCCCCTGGATCATTCTGTTATATGATACAGTAAGTTTTCTTGGACTCATCCGAACGTaGGGTACTGATGCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: PKLNLPWIILLYDTVSFLGLIRT*GTDAAQ
Trigger: CTGAGCAGCATCAGTACCCCACGTTCGGATGAGTCC...AAGAAAACTTACTGTATCATATAACAGAATGATCCAGGGGAGATTAAGCTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CCA 90 bp TCTGCCTTTAGTGTCATCATGTTAAGGCATGGAAGATGTTGCTGCCATGCTTATCATCTGTTTGTGGACTaGTGTGAGCAAGAAACCCAT +
Preference number: 4 (lower is better)
Translates to: SAFSVIMLRHGRCCCHAYHLFVD*CEQETH
Trigger: ATGGGTTTCTTGCTCACACCAGTCCACAAACAGATG...ATAAGCATGGCAGCAACATCTTCCATGCCTTAACATGATGACACTAAAGGCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR TCA 90 bp AAGTATGGACAGAGATACCCCATTTCTAGAATCCATCCCATATTTCACTTTTTACTCGGCAAAGGGAACTaGTGTATGCCAAAGCACCTC +
Preference number: 4 (lower is better)
Translates to: KYGQRYPISRIHPIFHFLLGKGN*CMPKHL
Trigger: GAGGTGCTTTGGCATACATCAGTTCCCTTTGCCGAG...TAAAAAGTGAAATATGGGATGGATTCTAGAAATGGGGTATCTCTGTCCATACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR TCA 90 bp TCTGCCTTTAGTGTCATCATGTTAAGGCATGGAAGATGTTGCTGCCATGCTTATTCAAAACTATCTGACTaGACCACCTGTATCACCTTC +
Preference number: 4 (lower is better)
Translates to: SAFSVIMLRHGRCCCHAYSKLSD*TTCITF
Trigger: GAAGGTGATACAGGTGGTTCAGTCAGATAGTTTTGA...ATAAGCATGGCAGCAACATCTTCCATGCCTTAACATGATGACACTAAAGGCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR TCA 90 bp AGATCCATGCATGAGTACATAAGAGTCATTACTAATGCACTCATGTCAAGAATAGTTAAGAGGTCGATCTaGCGGGGCTGGATCTTTTCC +
Preference number: 4 (lower is better)
Translates to: RSMHEYIRVITNALMSRIVKRSI*RGWIFS
Trigger: GGAAAAGATCCAGCCCCGTCAGATCGACCTCTTAAC...TATTCTTGACATGAGTGCATTAGTAATGACTCTTATGTACTCATGCATGGATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000280200.8
ENST00000577287.5
ENST00000581982.5
ENST00000582621.6
CDS-3UTR TCA 90 bp CCAAAGCTTAATCTCCCCTGGATCATTCTGTTATATGATACAGTAAGTTTTCTTGTTAAGAGGTCGATCTaGCGGGGCTGGATCTTTTCC +
Preference number: 4 (lower is better)
Translates to: PKLNLPWIILLYDTVSFLVKRSI*RGWIFS
Trigger: GGAAAAGATCCAGCCCCGTCAGATCGACCTCTTAAC...AAGAAAACTTACTGTATCATATAACAGAATGATCCAGGGGAGATTAAGCTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR TCA 90 bp GATTCAGAAGCCAGTTTATGCCCATACTTAATTCTAGACACAACATTTAAGCCCTTGGGAACTTGGAGGTaGAATTTCTGCCATGGACCA +
Preference number: 4 (lower is better)
Translates to: DSEASLCPYLILDTTFKPLGTWR*NFCHGP
Trigger: TGGTCCATGGCAGAAATTTCACCTCCAAGTTCCCAA...GGGCTTAAATGTTGTGTCTAGAATTAAGTATGGGCATAAACTGGCTTCTGAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR TCA 90 bp ACAAGGATGTATGAATTGCCAAGAGTTGGCAGCCATCTTGCCAACACAAGAGGAAGAAGGTTGGATAGTTaGCATAAATATCCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: TRMYELPRVGSHLANTRGRRLDS*HKYPLL
Trigger: CAAGAGAGGATATTTATGTCAACTATCCAACCTTCT...TCCTCTTGTGTTGGCAAGATGGCTGCCAACTCTTGGCAATTCATACATCCTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR TCA 90 bp ACAAGGATGTATGAATTGCCAAGAGTTGGCAGCCATCTTGCCAACACAAGAGGACACAGAATCTTTGATTaGTCTGATAGTAGAGTGCTT +
Preference number: 4 (lower is better)
Translates to: TRMYELPRVGSHLANTRGHRIFD*SDSRVL
Trigger: AAGCACTCTACTATCAGATCAATCAAAGATTCTGTG...TCCTCTTGTGTTGGCAAGATGGCTGCCAACTCTTGGCAATTCATACATCCTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR TCA 90 bp TCTACCAGACAGAAACAAGGATGTATGAATTGCCAAGAGTTGGCAGCCATCTTGACTTATACAGAAGTCTaGAGGTGGAGATCAGTACTT +
Preference number: 4 (lower is better)
Translates to: STRQKQGCMNCQELAAILTYTEV*RWRSVL
Trigger: AAGTACTGATCTCCACCTTCAGACTTCTGTATAAGT...CAAGATGGCTGCCAACTCTTGGCAATTCATACATCCTTGTTTCTGTCTGGTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR TCA 90 bp AATCAGAATCATAGGTGCAAAAGAGTAGAGGGGGAGAAACATACACTAGGGAGAGAGTATTTTATGTGGTaGGTTTGGGGAGAGAAAGAC +
Preference number: 4 (lower is better)
Translates to: NQNHRCKRVEGEKHTLGREYFMW*VWGEKD
Trigger: GTCTTTCTCTCCCCAAACTCACCACATAAAATACTC...TCTCCCTAGTGTATGTTTCTCCCCCTCTACTCTTTTGCACCTATGATTCTGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR TCA 90 bp ATCCAACACTCTGGAAAGGGATTCAGAAGCCAGTTTATGCCCATACTTAATTCTGATGCAATTATCAGTTaGCTTGGAACCCCGAAGGAA +
Preference number: 4 (lower is better)
Translates to: IQHSGKGFRSQFMPILNSDAIIS*LGTPKE
Trigger: TTCCTTCGGGGTTCCAAGTCAACTGATAATTGCATC...AGAATTAAGTATGGGCATAAACTGGCTTCTGAATCCCTTTCCAGAGTGTTGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR TCA 90 bp AAGTATGGACAGAGATACCCCATTTCTAGAATCCATCCCATATTTCACTTTTTAACTGGAGAAGCTCTGTaGATGTCCCAGACACAGACC +
Preference number: 4 (lower is better)
Translates to: KYGQRYPISRIHPIFHFLTGEAL*MSQTQT
Trigger: GGTCTGTGTCTGGGACATTCACAGAGCTTCTCCAGT...TAAAAAGTGAAATATGGGATGGATTCTAGAAATGGGGTATCTCTGTCCATACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR TCA 90 bp CCCTACCGTCCTATGCCACCACTTTCAACTGTCACTTTTAGTGGTATATTATATGAGAGGGACATCCATTaGGAAATAAGCCATGAACCT +
Preference number: 4 (lower is better)
Translates to: PYRPMPPLSTVTFSGILYERDIH*EISHEP
Trigger: AGGTTCATGGCTTATTTCTCAATGGATGTCCCTCTC...ATATAATATACCACTAAAAGTGACAGTTGAAAGTGGTGGCATAGGACGGTAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR GCA 90 bp ATCCAACACTCTGGAAAGGGATTCAGAAGCCAGTTTATGCCCATACTTAATTCTTGCCATGGACCAAGTTaGAGTAAGTTAAGAGGTCGA +
Preference number: 4 (lower is better)
Translates to: IQHSGKGFRSQFMPILNSCHGPS*SKLRGR
Trigger: TCGACCTCTTAACTTACTGCAACTTGGTCCATGGCA...AGAATTAAGTATGGGCATAAACTGGCTTCTGAATCCCTTTCCAGAGTGTTGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR GCA 90 bp AGATCCATGCATGAGTACATAAGAGTCATTACTAATGCACTCATGTCAAGAATAGGTTTCGTTTTCTCCTaGGCTGGCCTGCAAGTAGCA +
Preference number: 4 (lower is better)
Translates to: RSMHEYIRVITNALMSRIGFVFS*AGLQVA
Trigger: TGCTACTTGCAGGCCAGCGCAGGAGAAAACGAAACC...TATTCTTGACATGAGTGCATTAGTAATGACTCTTATGTACTCATGCATGGATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280200.8
ENST00000577287.5
ENST00000581982.5
ENST00000582621.6
CDS-3UTR GCA 90 bp GATTCAGAAGCCAGTTTATGCCCATACTTAATTCTAGACACAACATTTAAGCCCCTGGTAAATAGCCCTTaGCCAAAGCTTAATCTCCCC +
Preference number: 4 (lower is better)
Translates to: DSEASLCPYLILDTTFKPLVNSP*PKLNLP
Trigger: GGGGAGATTAAGCTTTGGGCAAGGGCTATTTACCAG...GGGCTTAAATGTTGTGTCTAGAATTAAGTATGGGCATAAACTGGCTTCTGAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR GCA 90 bp GATTCAGAAGCCAGTTTATGCCCATACTTAATTCTAGACACAACATTTAAGCCCTACCCTACCGTCCTATaGCACCACTTTCAACTGTCA +
Preference number: 4 (lower is better)
Translates to: DSEASLCPYLILDTTFKPYPTVL*HHFQLS
Trigger: TGACAGTTGAAAGTGGTGGCATAGGACGGTAGGGTA...GGGCTTAAATGTTGTGTCTAGAATTAAGTATGGGCATAAACTGGCTTCTGAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR GCA 90 bp ACAAGGATGTATGAATTGCCAAGAGTTGGCAGCCATCTTGCCAACACAAGAGGAAGAGTTTACCCTTCTTaGATATACTTAAGCACAACC +
Preference number: 4 (lower is better)
Translates to: TRMYELPRVGSHLANTRGRVYPS*IYLSTT
Trigger: GGTTGTGCTTAAGTATATGCAAGAAGGGTAAACTCT...TCCTCTTGTGTTGGCAAGATGGCTGCCAACTCTTGGCAATTCATACATCCTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR GCA 90 bp TTCCCTCCCAAATTTCTACCCTACCGTCCTATGCCACCACTTTCAACTGTCACTTGCTTTCTTGTAAACTaGCTTTCAAGTTTGTTACAC +
Preference number: 4 (lower is better)
Translates to: FPPKFLPYRPMPPLSTVTCFLVN*LSSLLH
Trigger: GTGTAACAAACTTGAAAGGCAGTTTACAAGAAAGCA...AGTGACAGTTGAAAGTGGTGGCATAGGACGGTAGGGTAGAAATTTGGGAGGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR GCA 90 bp ACAAGGATGTATGAATTGCCAAGAGTTGGCAGCCATCTTGCCAACACAAGAGGAAAGCTTGCTTCACCATaGAAACCAATAAATTCACTC +
Preference number: 4 (lower is better)
Translates to: TRMYELPRVGSHLANTRGKLASP*KPINSL
Trigger: GAGTGAATTTATTGGTTTGCATGGTGAAGCAAGCTT...TCCTCTTGTGTTGGCAAGATGGCTGCCAACTCTTGGCAATTCATACATCCTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR GCA 90 bp GCTGATAGAGTGGATTCTAGAAGTATGGACAGAGATACCCCATTTCTAGAATCCGAGGCTTTGCAATACTaGAGTGGTTTGCTACAAAAG +
Preference number: 4 (lower is better)
Translates to: ADRVDSRSMDRDTPFLESEALQY*SGLLQK
Trigger: CTTTTGTAGCAAACCACTGCAGTATTGCAAAGCCTC...GGATTCTAGAAATGGGGTATCTCTGTCCATACTTCTAGAATCCACTCTATCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR GCA 90 bp GCTGATAGAGTGGATTCTAGAAGTATGGACAGAGATACCCCATTTCTAGAATCCAATCAGAATCATAGGTaGAAAAGAGTAGAGGGGGAG +
Preference number: 4 (lower is better)
Translates to: ADRVDSRSMDRDTPFLESNQNHR*KRVEGE
Trigger: CTCCCCCTCTACTCTTTTGCACCTATGATTCTGATT...GGATTCTAGAAATGGGGTATCTCTGTCCATACTTCTAGAATCCACTCTATCAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR GCA 90 bp TTCCCTCCCAAATTTCTACCCTACCGTCCTATGCCACCACTTTCAACTGTCACTGTAGAAATTTTTCCCTaGTATTTCTCCATGGCAAAT +
Preference number: 4 (lower is better)
Translates to: FPPKFLPYRPMPPLSTVTVEIFP*YFSMAN
Trigger: ATTTGCCATGGAGAAATAGCAGGGAAAAATTTCTAC...AGTGACAGTTGAAAGTGGTGGCATAGGACGGTAGGGTAGAAATTTGGGAGGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR GCA 90 bp TCTACCAGACAGAAACAAGGATGTATGAATTGCCAAGAGTTGGCAGCCATCTTGGGAGATACAAGCTGCTaGCTTCCAGATATATTTAAG +
Preference number: 4 (lower is better)
Translates to: STRQKQGCMNCQELAAILGDTSC*LPDIFK
Trigger: CTTAAATATATCTGGAAGGCAGCAGCTTGTATCTCC...CAAGATGGCTGCCAACTCTTGGCAATTCATACATCCTTGTTTCTGTCTGGTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR GCA 90 bp TCTGCCTTTAGTGTCATCATGTTAAGGCATGGAAGATGTTGCTGCCATGCTTATAGGCATGGAAGATGTTaGTGCCATGCTTATAACAAG +
Preference number: 4 (lower is better)
Translates to: SAFSVIMLRHGRCCCHAYRHGRC*CHAYNK
Trigger: CTTGTTATAAGCATGGCAGCAACATCTTCCATGCCT...ATAAGCATGGCAGCAACATCTTCCATGCCTTAACATGATGACACTAAAGGCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR GCA 90 bp CCCTACCGTCCTATGCCACCACTTTCAACTGTCACTTTTAGTGGTATATTATATTCCACAAACAAACGTTaGATAAAAGGCCTCAGGACG +
Preference number: 4 (lower is better)
Translates to: PYRPMPPLSTVTFSGILYSTNKR*IKGLRT
Trigger: CGTCCTGAGGCCTTTTATGCAACGTTTGTTTGTGGA...ATATAATATACCACTAAAAGTGACAGTTGAAAGTGGTGGCATAGGACGGTAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CCA 90 bp TCTGCCTTTAGTGTCATCATGTTAAGGCATGGAAGATGTTGCTGCCATGCTTATAACTGTTTGAAAGGCTaGTTCTTGAGATGTGAGTGC +
Preference number: 4 (lower is better)
Translates to: SAFSVIMLRHGRCCCHAYNCLKG*FLRCEC
Trigger: GCACTCACATCTCAAGAACCAGCCTTTCAAACAGTT...ATAAGCATGGCAGCAACATCTTCCATGCCTTAACATGATGACACTAAAGGCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280200.8
CDS-3UTR CCA 90 bp TTCCCTCCCAAATTTCTACCCTACCGTCCTATGCCACCACTTTCAACTGTCACTAAAGAGTCATGTTATTaGAAGCCATCGTTGAATTCA +
Preference number: 4 (lower is better)
Translates to: FPPKFLPYRPMPPLSTVTKESCY*KPSLNS
Trigger: TGAATTCAACGATGGCTTCCAATAACATGACTCTTT...AGTGACAGTTGAAAGTGGTGGCATAGGACGGTAGGGTAGAAATTTGGGAGGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CCA 90 bp ATCCAACACTCTGGAAAGGGATTCAGAAGCCAGTTTATGCCCATACTTAATTCTGGTTCCGAAACAATGTaGCTATTTGATGGCACAGCT +
Preference number: 4 (lower is better)
Translates to: IQHSGKGFRSQFMPILNSGSETM*LFDGTA
Trigger: AGCTGTGCCATCAAATAGCCACATTGTTTCGGAACC...AGAATTAAGTATGGGCATAAACTGGCTTCTGAATCCCTTTCCAGAGTGTTGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR CCA 90 bp AGATCCATGCATGAGTACATAAGAGTCATTACTAATGCACTCATGTCAAGAATAACGCTCCACCTTCCGTaGCTGCAGTTGCTCACTATT +
Preference number: 4 (lower is better)
Translates to: RSMHEYIRVITNALMSRITLHLP*LQLLTI
Trigger: AATAGTGAGCAACTGCAGCCACGGAAGGTGGAGCGT...TATTCTTGACATGAGTGCATTAGTAATGACTCTTATGTACTCATGCATGGATCT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280200.8
ENST00000577287.5
ENST00000581982.5
ENST00000582621.6
CDS-3UTR CCA 90 bp AAGTATGGACAGAGATACCCCATTTCTAGAATCCATCCCATATTTCACTTTTTAACGCTCCACCTTCCGTaGCTGCAGTTGCTCACTATT +
Preference number: 4 (lower is better)
Translates to: KYGQRYPISRIHPIFHFLTLHLP*LQLLTI
Trigger: AATAGTGAGCAACTGCAGCCACGGAAGGTGGAGCGT...TAAAAAGTGAAATATGGGATGGATTCTAGAAATGGGGTATCTCTGTCCATACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR CCA 90 bp CCCAAATTTCTACCCTACCGTCCTATGCCACCACTTTCAACTGTCACTTTTAGTACAAAGAGGGTATATTaGTTATCGGTTTTACCCTCG +
Preference number: 4 (lower is better)
Translates to: PKFLPYRPMPPLSTVTFSTKRVY*LSVLPS
Trigger: CGAGGGTAAAACCGATAACCAATATACCCTCTTTGT...ACTAAAAGTGACAGTTGAAAGTGGTGGCATAGGACGGTAGGGTAGAAATTTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR CCA 90 bp ACAAGGATGTATGAATTGCCAAGAGTTGGCAGCCATCTTGCCAACACAAGAGGAACTATGCTGATAGAGTaGATTCTAGAAGTATGGACA +
Preference number: 4 (lower is better)
Translates to: TRMYELPRVGSHLANTRGTMLIE*ILEVWT
Trigger: TGTCCATACTTCTAGAATCCACTCTATCAGCATAGT...TCCTCTTGTGTTGGCAAGATGGCTGCCAACTCTTGGCAATTCATACATCCTTGT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR CCA 90 bp TCTGCCTTTAGTGTCATCATGTTAAGGCATGGAAGATGTTGCTGCCATGCTTATGCAGTGTGTTCTGTTTaGAAAGTAAGTTGTACCCTG +
Preference number: 4 (lower is better)
Translates to: SAFSVIMLRHGRCCCHAYAVCSV*KVSCTL
Trigger: CAGGGTACAACTTACTTTCCAAACAGAACACACTGC...ATAAGCATGGCAGCAACATCTTCCATGCCTTAACATGATGACACTAAAGGCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CCA 90 bp AGATCCATGCATGAGTACATAAGAGTCATTACTAATGCACTCATGTCAAGAATAGTTCTTCAACGAGCCTaGAGGGAATGTCGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: RSMHEYIRVITNALMSRIVLQRA*RECRSV
Trigger: CACACTGCGACATTCCCTCCAGGCTCGTTGAAGAAC...TATTCTTGACATGAGTGCATTAGTAATGACTCTTATGTACTCATGCATGGATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CCA 90 bp TCTACCAGACAGAAACAAGGATGTATGAATTGCCAAGAGTTGGCAGCCATCTTGAAGAAAACTATCATCTaGTCGAGGAGGGACATTTGT +
Preference number: 4 (lower is better)
Translates to: STRQKQGCMNCQELAAILKKTII*SRRDIC
Trigger: ACAAATGTCCCTCCTCGACCAGATGATAGTTTTCTT...CAAGATGGCTGCCAACTCTTGGCAATTCATACATCCTTGTTTCTGTCTGGTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CCA 90 bp TCTACCAGACAGAAACAAGGATGTATGAATTGCCAAGAGTTGGCAGCCATCTTGAATTATCAGTTGACTTaGAACCCCGAAGGAAGAATG +
Preference number: 4 (lower is better)
Translates to: STRQKQGCMNCQELAAILNYQLT*NPEGRM
Trigger: CATTCTTCCTTCGGGGTTCCAAGTCAACTGATAATT...CAAGATGGCTGCCAACTCTTGGCAATTCATACATCCTTGTTTCTGTCTGGTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CCA 90 bp CTACTACATTTGCTCCTAAGGCTAGACCTGGGATGGCGGCAAGAATTCTATACAAGGCAAGAAAAGTCATaGTCTGAAGAGATAAAGCAA +
Preference number: 4 (lower is better)
Translates to: LLHLLLRLDLGWRQEFYTRQEKS*SEEIKQ
Trigger: TTGCTTTATCTCTTCAGACCATGACTTTTCTTGCCT...TGTATAGAATTCTTGCCGCCATCCCAGGTCTAGCCTTAGGAGCAAATGTAGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CCA 90 bp GCTGATAGAGTGGATTCTAGAAGTATGGACAGAGATACCCCATTTCTAGAATCCATAATAAGTGAAAGGTaGTGCATGCATGGAGCAGAG +
Preference number: 4 (lower is better)
Translates to: ADRVDSRSMDRDTPFLESIISER*CMHGAE
Trigger: CTCTGCTCCATGCATGCACCACCTTTCACTTATTAT...GGATTCTAGAAATGGGGTATCTCTGTCCATACTTCTAGAATCCACTCTATCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582621.6
CDS-3UTR TCA 90 bp GATTCAGAAGCCAGTTTATGCCCATACTTAATTCTAGACACAACATTTAAGCCCCTTCTAACCATGCTCTaGATTGCCCAGTATTGTGCT +
Preference number: 4 (lower is better)
Translates to: DSEASLCPYLILDTTFKPLLTML*IAQYCA
Trigger: AGCACAATACTGGGCAATTCAGAGCATGGTTAGAAG...GGGCTTAAATGTTGTGTCTAGAATTAAGTATGGGCATAAACTGGCTTCTGAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR TCA 90 bp TCTACCAGACAGAAACAAGGATGTATGAATTGCCAAGAGTTGGCAGCCATCTTGGACACTAGAGGAATTTaGAGAAATTTAGCACCTATG +
Preference number: 4 (lower is better)
Translates to: STRQKQGCMNCQELAAILDTRGI*RNLAPM
Trigger: CATAGGTGCTAAATTTCTTCAAATTCCTCTAGTGTC...CAAGATGGCTGCCAACTCTTGGCAATTCATACATCCTTGTTTCTGTCTGGTAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR GCA 90 bp ATCCAACACTCTGGAAAGGGATTCAGAAGCCAGTTTATGCCCATACTTAATTCTAAGGGAACTGATGTATaGCAAAGCACCTCTTCACAT +
Preference number: 4 (lower is better)
Translates to: IQHSGKGFRSQFMPILNSKGTDV*QSTSSH
Trigger: ATGTGAAGAGGTGCTTTGGCATACATCAGTTCCCTT...AGAATTAAGTATGGGCATAAACTGGCTTCTGAATCCCTTTCCAGAGTGTTGGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR GCA 90 bp CCAAAGCTTAATCTCCCCTGGATCATTCTGTTATATGATACAGTAAGTTTTCTTATGGCTATGGAATCCTaGTGGGTCCCGATCTTGAAC +
Preference number: 4 (lower is better)
Translates to: PKLNLPWIILLYDTVSFLMAMES*WVPILN
Trigger: GTTCAAGATCGGGACCCAGCAGGATTCCATAGCCAT...AAGAAAACTTACTGTATCATATAACAGAATGATCCAGGGGAGATTAAGCTTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR GCA 90 bp AGATCCATGCATGAGTACATAAGAGTCATTACTAATGCACTCATGTCAAGAATATCCACCTTCCGTGGCTaGAGTTGCTCACTATTTGTC +
Preference number: 4 (lower is better)
Translates to: RSMHEYIRVITNALMSRISTFRG*SCSLFV
Trigger: GACAAATAGTGAGCAACTGCAGCCACGGAAGGTGGA...TATTCTTGACATGAGTGCATTAGTAATGACTCTTATGTACTCATGCATGGATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280200.8
ENST00000577287.5
ENST00000581982.5
ENST00000582621.6
CDS-3UTR GCA 90 bp AAGTATGGACAGAGATACCCCATTTCTAGAATCCATCCCATATTTCACTTTTTATCCACCTTCCGTGGCTaGAGTTGCTCACTATTTGTC +
Preference number: 4 (lower is better)
Translates to: KYGQRYPISRIHPIFHFLSTFRG*SCSLFV
Trigger: GACAAATAGTGAGCAACTGCAGCCACGGAAGGTGGA...TAAAAAGTGAAATATGGGATGGATTCTAGAAATGGGGTATCTCTGTCCATACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR GCA 90 bp ATCCAACACTCTGGAAAGGGATTCAGAAGCCAGTTTATGCCCATACTTAATTCTAACCATGCTCTGAATTaGCCAGTATTGTGCTTTGAC +
Preference number: 4 (lower is better)
Translates to: IQHSGKGFRSQFMPILNSNHALN*PVLCFD
Trigger: GTCAAAGCACAATACTGGGCAATTCAGAGCATGGTT...AGAATTAAGTATGGGCATAAACTGGCTTCTGAATCCCTTTCCAGAGTGTTGGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR GCA 90 bp ACAAGGATGTATGAATTGCCAAGAGTTGGCAGCCATCTTGCCAACACAAGAGGAGTCTTGGTTAATCACTaGAGTCAATATTTGTTGGTA +
Preference number: 4 (lower is better)
Translates to: TRMYELPRVGSHLANTRGVLVNH*SQYLLV
Trigger: TACCAACAAATATTGACTGCAGTGATTAACCAAGAC...TCCTCTTGTGTTGGCAAGATGGCTGCCAACTCTTGGCAATTCATACATCCTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR GCA 90 bp TCTACCAGACAGAAACAAGGATGTATGAATTGCCAAGAGTTGGCAGCCATCTTGAGAATAGTAAAGGATTaGCCTCTCGCATTTATCTTC +
Preference number: 4 (lower is better)
Translates to: STRQKQGCMNCQELAAILRIVKD*PLAFIF
Trigger: GAAGATAAATGCGAGAGGGCAATCCTTTACTATTCT...CAAGATGGCTGCCAACTCTTGGCAATTCATACATCCTTGTTTCTGTCTGGTAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR GCA 90 bp CCCAAATTTCTACCCTACCGTCCTATGCCACCACTTTCAACTGTCACTTTTAGTAGAGTTTACCCTTCTTaGATATACTTAAGCACAACC +
Preference number: 4 (lower is better)
Translates to: PKFLPYRPMPPLSTVTFSRVYPS*IYLSTT
Trigger: GGTTGTGCTTAAGTATATGCAAGAAGGGTAAACTCT...ACTAAAAGTGACAGTTGAAAGTGGTGGCATAGGACGGTAGGGTAGAAATTTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR GCA 90 bp TCTACCAGACAGAAACAAGGATGTATGAATTGCCAAGAGTTGGCAGCCATCTTGGATCTGATAGTAGAGTaGTTTCTTGTAAACTGCCTT +
Preference number: 4 (lower is better)
Translates to: STRQKQGCMNCQELAAILDLIVE*FLVNCL
Trigger: AAGGCAGTTTACAAGAAAGCACTCTACTATCAGATC...CAAGATGGCTGCCAACTCTTGGCAATTCATACATCCTTGTTTCTGTCTGGTAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR GCA 90 bp AAGTATGGACAGAGATACCCCATTTCTAGAATCCATCCCATATTTCACTTTTTATTCAAGCGATTCTTCTaGCTCAGCCTCCCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: KYGQRYPISRIHPIFHFLFKRFF*LSLPSS
Trigger: GCTACTTGGGAGGCTGAGGCAGAAGAATCGCTTGAA...TAAAAAGTGAAATATGGGATGGATTCTAGAAATGGGGTATCTCTGTCCATACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR GCA 90 bp AGATCCATGCATGAGTACATAAGAGTCATTACTAATGCACTCATGTCAAGAATAGAAACGAGTGTTTCCTaGCTCGTTTCCCACTGGAGT +
Preference number: 4 (lower is better)
Translates to: RSMHEYIRVITNALMSRIETSVS*LVSHWS
Trigger: ACTCCAGTGGGAAACGAGGCAGGAAACACTCGTTTC...TATTCTTGACATGAGTGCATTAGTAATGACTCTTATGTACTCATGCATGGATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR GCA 90 bp GCTGATAGAGTGGATTCTAGAAGTATGGACAGAGATACCCCATTTCTAGAATCCCAAATTGTTGCTTTCTaGAGGAAACGAGTGTTTCCT +
Preference number: 4 (lower is better)
Translates to: ADRVDSRSMDRDTPFLESQIVAF*RKRVFP
Trigger: AGGAAACACTCGTTTCCTGCAGAAAGCAACAATTTG...GGATTCTAGAAATGGGGTATCTCTGTCCATACTTCTAGAATCCACTCTATCAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR GCA 90 bp GATTCAGAAGCCAGTTTATGCCCATACTTAATTCTAGACACAACATTTAAGCCCGTAAGTTGGGTGAATTaGTGGCATCTGTTTGTGGAC +
Preference number: 4 (lower is better)
Translates to: DSEASLCPYLILDTTFKPVSWVN*WHLFVD
Trigger: GTCCACAAACAGATGCCAGCAATTCACCCAACTTAC...GGGCTTAAATGTTGTGTCTAGAATTAAGTATGGGCATAAACTGGCTTCTGAATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CCA 90 bp AGATCCATGCATGAGTACATAAGAGTCATTACTAATGCACTCATGTCAAGAATAGTATCCTGTTTATCGTaGCCTCCTAGCCTCAACACC +
Preference number: 4 (lower is better)
Translates to: RSMHEYIRVITNALMSRIVSCLS*PPSLNT
Trigger: GGTGTTGAGGCTAGGAGGCCACGATAAACAGGATAC...TATTCTTGACATGAGTGCATTAGTAATGACTCTTATGTACTCATGCATGGATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000581982.5
CDS-3UTR CCA 90 bp GCTGATAGAGTGGATTCTAGAAGTATGGACAGAGATACCCCATTTCTAGAATCCACAAAGAGGGTATATTaGTTATCGGTTTTACCCTCG +
Preference number: 4 (lower is better)
Translates to: ADRVDSRSMDRDTPFLESTKRVY*LSVLPS
Trigger: CGAGGGTAAAACCGATAACCAATATACCCTCTTTGT...GGATTCTAGAAATGGGGTATCTCTGTCCATACTTCTAGAATCCACTCTATCAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR CCA 90 bp AATCAGAATCATAGGTGCAAAAGAGTAGAGGGGGAGAAACATACACTAGGGAGAAAGTTCCAAATGTTCTaGAGGCTTTGCAATACTGCA +
Preference number: 4 (lower is better)
Translates to: NQNHRCKRVEGEKHTLGRKFQMF*RLCNTA
Trigger: TGCAGTATTGCAAAGCCTCCAGAACATTTGGAACTT...TCTCCCTAGTGTATGTTTCTCCCCCTCTACTCTTTTGCACCTATGATTCTGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CCA 90 bp AATCAGAATCATAGGTGCAAAAGAGTAGAGGGGGAGAAACATACACTAGGGAGAAAGAAAACTATCATCTaGTCGAGGAGGGACATTTGT +
Preference number: 4 (lower is better)
Translates to: NQNHRCKRVEGEKHTLGRKKTII*SRRDIC
Trigger: ACAAATGTCCCTCCTCGACCAGATGATAGTTTTCTT...TCTCCCTAGTGTATGTTTCTCCCCCTCTACTCTTTTGCACCTATGATTCTGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CCA 90 bp GCTGATAGAGTGGATTCTAGAAGTATGGACAGAGATACCCCATTTCTAGAATCCCTTTATATGGTAAGTTaGGTGAATTGCTGGCATCTG +
Preference number: 4 (lower is better)
Translates to: ADRVDSRSMDRDTPFLESLYMVS*VNCWHL
Trigger: CAGATGCCAGCAATTCACCCAACTTACCATATAAAG...GGATTCTAGAAATGGGGTATCTCTGTCCATACTTCTAGAATCCACTCTATCAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CCA 90 bp AATCAGAATCATAGGTGCAAAAGAGTAGAGGGGGAGAAACATACACTAGGGAGAAATGCTTGTGAAATCTaGTGCTTTAGACTGAGCTCT +
Preference number: 4 (lower is better)
Translates to: NQNHRCKRVEGEKHTLGRNACEI*CFRLSS
Trigger: AGAGCTCAGTCTAAAGCACCAGATTTCACAAGCATT...TCTCCCTAGTGTATGTTTCTCCCCCTCTACTCTTTTGCACCTATGATTCTGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR TCA 90 bp AGATCCATGCATGAGTACATAAGAGTCATTACTAATGCACTCATGTCAAGAATATTGGGAACTTGGAGGTaGAATTTCTGCCATGGACCA +
Preference number: 4 (lower is better)
Translates to: RSMHEYIRVITNALMSRILGTWR*NFCHGP
Trigger: TGGTCCATGGCAGAAATTTCACCTCCAAGTTCCCAA...TATTCTTGACATGAGTGCATTAGTAATGACTCTTATGTACTCATGCATGGATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280200.8
ENST00000577287.5
ENST00000581982.5
ENST00000582621.6
CDS-3UTR TCA 90 bp ATCCAACACTCTGGAAAGGGATTCAGAAGCCAGTTTATGCCCATACTTAATTCTGCATTTTGGTCACAGTaGTCTCTAATTACAATGTGG +
Preference number: 4 (lower is better)
Translates to: IQHSGKGFRSQFMPILNSAFWSQ*SLITMW
Trigger: CCACATTGTAATTAGAGATCACTGTGACCAAAATGC...AGAATTAAGTATGGGCATAAACTGGCTTCTGAATCCCTTTCCAGAGTGTTGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR TCA 90 bp AGATCCATGCATGAGTACATAAGAGTCATTACTAATGCACTCATGTCAAGAATAGGGACATTTGTCAGTTaGAGTTCTTCAACGAGCCTG +
Preference number: 4 (lower is better)
Translates to: RSMHEYIRVITNALMSRIGTFVS*SSSTSL
Trigger: CAGGCTCGTTGAAGAACTTCAACTGACAAATGTCCC...TATTCTTGACATGAGTGCATTAGTAATGACTCTTATGTACTCATGCATGGATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR TCA 90 bp CCCTACCGTCCTATGCCACCACTTTCAACTGTCACTTTTAGTGGTATATTATATTCTTACTCAGGCAGCTaGTCAAAGAATAATGGTCTT +
Preference number: 4 (lower is better)
Translates to: PYRPMPPLSTVTFSGILYSYSGS*SKNNGL
Trigger: AAGACCATTATTCTTTGATCAGCTGCCTGAGTAAGA...ATATAATATACCACTAAAAGTGACAGTTGAAAGTGGTGGCATAGGACGGTAGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR TCA 90 bp TCTGCCTTTAGTGTCATCATGTTAAGGCATGGAAGATGTTGCTGCCATGCTTATCACTCAACAGCAGAATaGACATTCTTCTTAAGATCA +
Preference number: 4 (lower is better)
Translates to: SAFSVIMLRHGRCCCHAYHSTAE*TFFLRS
Trigger: TGATCTTAAGAAGAATGTTCATTCTGCTGTTGAGTG...ATAAGCATGGCAGCAACATCTTCCATGCCTTAACATGATGACACTAAAGGCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR TCA 90 bp AGATCCATGCATGAGTACATAAGAGTCATTACTAATGCACTCATGTCAAGAATAGACAGAAAGTCTCTCTaGAGAGGAGCACTTAGGGAA +
Preference number: 4 (lower is better)
Translates to: RSMHEYIRVITNALMSRIDRKSL*RGALRE
Trigger: TTCCCTAAGTGCTCCTCTTCAGAGAGACTTTCTGTC...TATTCTTGACATGAGTGCATTAGTAATGACTCTTATGTACTCATGCATGGATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR TCA 90 bp AGATCCATGCATGAGTACATAAGAGTCATTACTAATGCACTCATGTCAAGAATAATTGGTTGTCCTGACTaGACCACCTGTATCACCTTC +
Preference number: 4 (lower is better)
Translates to: RSMHEYIRVITNALMSRIIGCPD*TTCITF
Trigger: GAAGGTGATACAGGTGGTTCAGTCAGGACAACCAAT...TATTCTTGACATGAGTGCATTAGTAATGACTCTTATGTACTCATGCATGGATCT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577287.5
CDS-3UTR TCA 90 bp AGATCCATGCATGAGTACATAAGAGTCATTACTAATGCACTCATGTCAAGAATAAACTATCTTGAGATGTaGGTGCTGCTCGCTCTAACG +
Preference number: 4 (lower is better)
Translates to: RSMHEYIRVITNALMSRINYLEM*VLLALT
Trigger: CGTTAGAGCGAGCAGCACTCACATCTCAAGATAGTT...TATTCTTGACATGAGTGCATTAGTAATGACTCTTATGTACTCATGCATGGATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581982.5
CDS-3UTR GCA 90 bp AGATCCATGCATGAGTACATAAGAGTCATTACTAATGCACTCATGTCAAGAATATTCCGTGGCTGCAGTTaGTCACTATTTGTCTTGGGA +
Preference number: 4 (lower is better)
Translates to: RSMHEYIRVITNALMSRIFRGCS*SLFVLG
Trigger: TCCCAAGACAAATAGTGAGCAACTGCAGCCACGGAA...TATTCTTGACATGAGTGCATTAGTAATGACTCTTATGTACTCATGCATGGATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280200.8
ENST00000577287.5
ENST00000581982.5
ENST00000582621.6
CDS-3UTR GCA 90 bp TCTGCCTTTAGTGTCATCATGTTAAGGCATGGAAGATGTTGCTGCCATGCTTATATTCATTTCTTCTACTaGCAGGTATTCTTCTGGACT +
Preference number: 4 (lower is better)
Translates to: SAFSVIMLRHGRCCCHAYIHFFY*QVFFWT
Trigger: AGTCCAGAAGAATACCTGGCAGTAGAAGAAATGAAT...ATAAGCATGGCAGCAACATCTTCCATGCCTTAACATGATGACACTAAAGGCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR GCA 90 bp GCTGATAGAGTGGATTCTAGAAGTATGGACAGAGATACCCCATTTCTAGAATCCATTCATTTCTTCTACTaGCAGGTATTCTTCTGGACT +
Preference number: 4 (lower is better)
Translates to: ADRVDSRSMDRDTPFLESIHFFY*QVFFWT
Trigger: AGTCCAGAAGAATACCTGGCAGTAGAAGAAATGAAT...GGATTCTAGAAATGGGGTATCTCTGTCCATACTTCTAGAATCCACTCTATCAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR GCA 90 bp AGATCCATGCATGAGTACATAAGAGTCATTACTAATGCACTCATGTCAAGAATATACCCTACCGTCCTATaGCACCACTTTCAACTGTCA +
Preference number: 4 (lower is better)
Translates to: RSMHEYIRVITNALMSRIYPTVL*HHFQLS
Trigger: TGACAGTTGAAAGTGGTGGCATAGGACGGTAGGGTA...TATTCTTGACATGAGTGCATTAGTAATGACTCTTATGTACTCATGCATGGATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR GCA 90 bp CCAAAGCTTAATCTCCCCTGGATCATTCTGTTATATGATACAGTAAGTTTTCTTCCACATGTTGTGTTTTaGAAGCCTACTCCATCGGGT +
Preference number: 4 (lower is better)
Translates to: PKLNLPWIILLYDTVSFLPHVVF*KPTPSG
Trigger: ACCCGATGGAGTAGGCTTGCAAAACACAACATGTGG...AAGAAAACTTACTGTATCATATAACAGAATGATCCAGGGGAGATTAAGCTTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR GCA 90 bp CTCAGAAAACTTAGTATCACTGAGAGTATATTGGAGAGCTCAAAGTCTTACTCAGCTTGTGAAATCTGGTaGTTTAGACTGAGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: LRKLSITESILESSKSYSACEIW*FRLSSV
Trigger: CACAGAGCTCAGTCTAAAGCACCAGATTTCACAAGC...TGAGTAAGACTTTGAGCTCTCCAATATACTCTCAGTGATACTAAGTTTTCTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CCA 90 bp TCTGCCTTTAGTGTCATCATGTTAAGGCATGGAAGATGTTGCTGCCATGCTTATACTATGCTGATAGAGTaGATTCTAGAAGTATGGACA +
Preference number: 4 (lower is better)
Translates to: SAFSVIMLRHGRCCCHAYTMLIE*ILEVWT
Trigger: TGTCCATACTTCTAGAATCCACTCTATCAGCATAGT...ATAAGCATGGCAGCAACATCTTCCATGCCTTAACATGATGACACTAAAGGCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CCA 90 bp CCCAAATTTCTACCCTACCGTCCTATGCCACCACTTTCAACTGTCACTTTTAGTCAAACCAATATAACTTaGATGTTCACAATCCACGAA +
Preference number: 4 (lower is better)
Translates to: PKFLPYRPMPPLSTVTFSQTNIT*MFTIHE
Trigger: TTCGTGGATTGTGAACATCCAAGTTATATTGGTTTG...ACTAAAAGTGACAGTTGAAAGTGGTGGCATAGGACGGTAGGGTAGAAATTTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CCA 90 bp CCCTACCGTCCTATGCCACCACTTTCAACTGTCACTTTTAGTGGTATATTATATCCTGCTATTTCTCCATaGCAAATGAAAGTAGTGATC +
Preference number: 4 (lower is better)
Translates to: PYRPMPPLSTVTFSGILYPAISP*QMKVVI
Trigger: GATCACTACTTTCATTTGCCATGGAGAAATAGCAGG...ATATAATATACCACTAAAAGTGACAGTTGAAAGTGGTGGCATAGGACGGTAGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CCA 90 bp CCCAAATTTCTACCCTACCGTCCTATGCCACCACTTTCAACTGTCACTTTTAGTTCCTTTTCAGGAATTTaGAGAACTTATGCTTGGTAT +
Preference number: 4 (lower is better)
Translates to: PKFLPYRPMPPLSTVTFSSFSGI*RTYAWY
Trigger: ATACCAAGCATAAGTTCTCCAAATTCCTGAAAAGGA...ACTAAAAGTGACAGTTGAAAGTGGTGGCATAGGACGGTAGGGTAGAAATTTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CCA 90 bp CCAAAGCTTAATCTCCCCTGGATCATTCTGTTATATGATACAGTAAGTTTTCTTAGTTGGGTGAATTGCTaGCATCTGTTTGTGGACTGG +
Preference number: 4 (lower is better)
Translates to: PKLNLPWIILLYDTVSFLSWVNC*HLFVDW
Trigger: CCAGTCCACAAACAGATGCCAGCAATTCACCCAACT...AAGAAAACTTACTGTATCATATAACAGAATGATCCAGGGGAGATTAAGCTTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CCA 90 bp AATCAGAATCATAGGTGCAAAAGAGTAGAGGGGGAGAAACATACACTAGGGAGACATGTTATCTCCTTGTaGCTTGTGCTACAAATTTTC +
Preference number: 4 (lower is better)
Translates to: NQNHRCKRVEGEKHTLGRHVISL*LVLQIF
Trigger: GAAAATTTGTAGCACAAGCCACAAGGAGATAACATG...TCTCCCTAGTGTATGTTTCTCCCCCTCTACTCTTTTGCACCTATGATTCTGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR TCA 90 bp AGATCCATGCATGAGTACATAAGAGTCATTACTAATGCACTCATGTCAAGAATACATGACAATGGTATCTaGCTATACTGTCCCTTCCAC +
Preference number: 4 (lower is better)
Translates to: RSMHEYIRVITNALMSRIHDNGI*LYCPFH
Trigger: GTGGAAGGGACAGTATAGTCAGATACCATTGTCATG...TATTCTTGACATGAGTGCATTAGTAATGACTCTTATGTACTCATGCATGGATCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR TCA 90 bp CCCTACCGTCCTATGCCACCACTTTCAACTGTCACTTTTAGTGGTATATTATATTTTGGAATAAGTCAGTaGATAAAAATAGGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: PYRPMPPLSTVTFSGILYFGISQ*IKIGAQ
Trigger: CTGAGCCCCTATTTTTATTCACTGACTTATTCCAAA...ATATAATATACCACTAAAAGTGACAGTTGAAAGTGGTGGCATAGGACGGTAGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR TCA 90 bp CCCTACCGTCCTATGCCACCACTTTCAACTGTCACTTTTAGTGGTATATTATATGAGAAAAACCTAGGTTaGTCAATGAAAGATATGCCA +
Preference number: 4 (lower is better)
Translates to: PYRPMPPLSTVTFSGILYEKNLG*SMKDMP
Trigger: TGGCATATCTTTCATTGATCAACCTAGGTTTTTCTC...ATATAATATACCACTAAAAGTGACAGTTGAAAGTGGTGGCATAGGACGGTAGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR TCA 90 bp AGATCCATGCATGAGTACATAAGAGTCATTACTAATGCACTCATGTCAAGAATAGATGCAATTATCAGTTaGCTTGGAACCCCGAAGGAA +
Preference number: 4 (lower is better)
Translates to: RSMHEYIRVITNALMSRIDAIIS*LGTPKE
Trigger: TTCCTTCGGGGTTCCAAGTCAACTGATAATTGCATC...TATTCTTGACATGAGTGCATTAGTAATGACTCTTATGTACTCATGCATGGATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR TCA 90 bp CTCAGAAAACTTAGTATCACTGAGAGTATATTGGAGAGCTCAAAGTCTTACTCATTGCTTTTTATAATGTaGCATGCAGATCCCCAGCAC +
Preference number: 4 (lower is better)
Translates to: LRKLSITESILESSKSYSLLFIM*HADPQH
Trigger: GTGCTGGGGATCTGCATGTCACATTATAAAAAGCAA...TGAGTAAGACTTTGAGCTCTCCAATATACTCTCAGTGATACTAAGTTTTCTGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000582621.6
CDS-3UTR TCA 90 bp AGATCCATGCATGAGTACATAAGAGTCATTACTAATGCACTCATGTCAAGAATACTCCATCCTCTATCCTaGAAGGTTGAGCTGTTTTCA +
Preference number: 4 (lower is better)
Translates to: RSMHEYIRVITNALMSRILHPLS*KVELFS
Trigger: TGAAAACAGCTCAACCTTTCAGGATAGAGGATGGAG...TATTCTTGACATGAGTGCATTAGTAATGACTCTTATGTACTCATGCATGGATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577287.5
CDS-3UTR GCA 90 bp AGATCCATGCATGAGTACATAAGAGTCATTACTAATGCACTCATGTCAAGAATATGCCATGGACCAAGTTaGAGTAAGTTAAGAGGTCGA +
Preference number: 4 (lower is better)
Translates to: RSMHEYIRVITNALMSRICHGPS*SKLRGR
Trigger: TCGACCTCTTAACTTACTGCAACTTGGTCCATGGCA...TATTCTTGACATGAGTGCATTAGTAATGACTCTTATGTACTCATGCATGGATCT
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280200.8
ENST00000577287.5
ENST00000581982.5
ENST00000582621.6
CDS-3UTR GCA 90 bp AGATCCATGCATGAGTACATAAGAGTCATTACTAATGCACTCATGTCAAGAATAAATTGCCCAGTATTGTaGTTTGACCCTGCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: RSMHEYIRVITNALMSRINCPVL*FDPASQ
Trigger: CTGAGAAGCAGGGTCAAAGCACAATACTGGGCAATT...TATTCTTGACATGAGTGCATTAGTAATGACTCTTATGTACTCATGCATGGATCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR GCA 90 bp TCTGCCTTTAGTGTCATCATGTTAAGGCATGGAAGATGTTGCTGCCATGCTTATGTCTTGGTTAATCACTaGAGTCAATATTTGTTGGTA +
Preference number: 4 (lower is better)
Translates to: SAFSVIMLRHGRCCCHAYVLVNH*SQYLLV
Trigger: TACCAACAAATATTGACTGCAGTGATTAACCAAGAC...ATAAGCATGGCAGCAACATCTTCCATGCCTTAACATGATGACACTAAAGGCAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR GCA 90 bp CCCTACCGTCCTATGCCACCACTTTCAACTGTCACTTTTAGTGGTATATTATATATTCATTTCTTCTACTaGCAGGTATTCTTCTGGACT +
Preference number: 4 (lower is better)
Translates to: PYRPMPPLSTVTFSGILYIHFFY*QVFFWT
Trigger: AGTCCAGAAGAATACCTGGCAGTAGAAGAAATGAAT...ATATAATATACCACTAAAAGTGACAGTTGAAAGTGGTGGCATAGGACGGTAGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR GCA 90 bp CCCTACCGTCCTATGCCACCACTTTCAACTGTCACTTTTAGTGGTATATTATATAGAATAGTAAAGGATTaGCCTCTCGCATTTATCTTC +
Preference number: 4 (lower is better)
Translates to: PYRPMPPLSTVTFSGILYRIVKD*PLAFIF
Trigger: GAAGATAAATGCGAGAGGGCAATCCTTTACTATTCT...ATATAATATACCACTAAAAGTGACAGTTGAAAGTGGTGGCATAGGACGGTAGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR GCA 90 bp TCTGCCTTTAGTGTCATCATGTTAAGGCATGGAAGATGTTGCTGCCATGCTTATTGCTTTCTTGTAAACTaGCTTTCAAGTTTGTTACAC +
Preference number: 4 (lower is better)
Translates to: SAFSVIMLRHGRCCCHAYCFLVN*LSSLLH
Trigger: GTGTAACAAACTTGAAAGGCAGTTTACAAGAAAGCA...ATAAGCATGGCAGCAACATCTTCCATGCCTTAACATGATGACACTAAAGGCAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR GCA 90 bp CCAAAGCTTAATCTCCCCTGGATCATTCTGTTATATGATACAGTAAGTTTTCTTATGTTCTGGAGGCTTTaGAATACTGCAGTGGTTTGC +
Preference number: 4 (lower is better)
Translates to: PKLNLPWIILLYDTVSFLMFWRL*NTAVVC
Trigger: GCAAACCACTGCAGTATTGCAAAGCCTCCAGAACAT...AAGAAAACTTACTGTATCATATAACAGAATGATCCAGGGGAGATTAAGCTTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR GCA 90 bp CCAAAGCTTAATCTCCCCTGGATCATTCTGTTATATGATACAGTAAGTTTTCTTGGGGGAGATACAAGCTaGTGCCTTCCAGATATATTT +
Preference number: 4 (lower is better)
Translates to: PKLNLPWIILLYDTVSFLGGDTS*CLPDIF
Trigger: AAATATATCTGGAAGGCAGCAGCTTGTATCTCCCCC...AAGAAAACTTACTGTATCATATAACAGAATGATCCAGGGGAGATTAAGCTTTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR GCA 90 bp CTCAGAAAACTTAGTATCACTGAGAGTATATTGGAGAGCTCAAAGTCTTACTCAAGGCATGGAAGATGTTaGTGCCATGCTTATAACAAG +
Preference number: 4 (lower is better)
Translates to: LRKLSITESILESSKSYSRHGRC*CHAYNK
Trigger: CTTGTTATAAGCATGGCAGCAACATCTTCCATGCCT...TGAGTAAGACTTTGAGCTCTCCAATATACTCTCAGTGATACTAAGTTTTCTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR GCA 90 bp AGATCCATGCATGAGTACATAAGAGTCATTACTAATGCACTCATGTCAAGAATAACCTGTATCACCTTCTaGCAAGTTCCCTCTGTATAC +
Preference number: 4 (lower is better)
Translates to: RSMHEYIRVITNALMSRITCITF*QVPSVY
Trigger: GTATACAGAGGGAACTTGGCAGAAGGTGATACAGGT...TATTCTTGACATGAGTGCATTAGTAATGACTCTTATGTACTCATGCATGGATCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577287.5
CDS-3UTR CCA 90 bp GATTCAGAAGCCAGTTTATGCCCATACTTAATTCTAGACACAACATTTAAGCCCTTCCCATCTGCGTCTTaGTTAAGGACTTTTATCGTA +
Preference number: 4 (lower is better)
Translates to: DSEASLCPYLILDTTFKPFPSAS*LRTFIV
Trigger: TACGATAAAAGTCCTTAACCAAGACGCAGATGGGAA...GGGCTTAAATGTTGTGTCTAGAATTAAGTATGGGCATAAACTGGCTTCTGAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000581982.5
CDS-3UTR CCA 90 bp AGATCCATGCATGAGTACATAAGAGTCATTACTAATGCACTCATGTCAAGAATAGGTTCCGAAACAATGTaGCTATTTGATGGCACAGCT +
Preference number: 4 (lower is better)
Translates to: RSMHEYIRVITNALMSRIGSETM*LFDGTA
Trigger: AGCTGTGCCATCAAATAGCCACATTGTTTCGGAACC...TATTCTTGACATGAGTGCATTAGTAATGACTCTTATGTACTCATGCATGGATCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280200.8
ENST00000577287.5
ENST00000581982.5
ENST00000582621.6
CDS-3UTR CCA 90 bp CCCTACCGTCCTATGCCACCACTTTCAACTGTCACTTTTAGTGGTATATTATATTCTGCGAGAGAAGGTTaGATAGTTGACATAAATATC +
Preference number: 4 (lower is better)
Translates to: PYRPMPPLSTVTFSGILYSAREG*IVDINI
Trigger: GATATTTATGTCAACTATCCAACCTTCTCTCGCAGA...ATATAATATACCACTAAAAGTGACAGTTGAAAGTGGTGGCATAGGACGGTAGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR CCA 90 bp AAGTATGGACAGAGATACCCCATTTCTAGAATCCATCCCATATTTCACTTTTTAATGGATCCAACACTCTaGAAAGGGATTCAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: KYGQRYPISRIHPIFHFLMDPTL*KGIQKP
Trigger: TGGCTTCTGAATCCCTTTCCAGAGTGTTGGATCCAT...TAAAAAGTGAAATATGGGATGGATTCTAGAAATGGGGTATCTCTGTCCATACTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR CCA 90 bp GCTGATAGAGTGGATTCTAGAAGTATGGACAGAGATACCCCATTTCTAGAATCCCAAACCAATATAACTTaGATGTTCACAATCCACGAA +
Preference number: 4 (lower is better)
Translates to: ADRVDSRSMDRDTPFLESQTNIT*MFTIHE
Trigger: TTCGTGGATTGTGAACATCCAAGTTATATTGGTTTG...GGATTCTAGAAATGGGGTATCTCTGTCCATACTTCTAGAATCCACTCTATCAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CCA 90 bp TCTGCCTTTAGTGTCATCATGTTAAGGCATGGAAGATGTTGCTGCCATGCTTATTCCTTTTCAGGAATTTaGAGAACTTATGCTTGGTAT +
Preference number: 4 (lower is better)
Translates to: SAFSVIMLRHGRCCCHAYSFSGI*RTYAWY
Trigger: ATACCAAGCATAAGTTCTCCAAATTCCTGAAAAGGA...ATAAGCATGGCAGCAACATCTTCCATGCCTTAACATGATGACACTAAAGGCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CCA 90 bp TCTGCCTTTAGTGTCATCATGTTAAGGCATGGAAGATGTTGCTGCCATGCTTATATAACAAGACAAAGCTaGAAAGTTGGAAAGCTGAAA +
Preference number: 4 (lower is better)
Translates to: SAFSVIMLRHGRCCCHAYITRQS*KVGKLK
Trigger: TTTCAGCTTTCCAACTTTCCAGCTTTGTCTTGTTAT...ATAAGCATGGCAGCAACATCTTCCATGCCTTAACATGATGACACTAAAGGCAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR CAA 72 bp AAAAATGTCTTGGTTAATCACTGCAGTCAATATTTGTaGGTAAACTCTCCAGCTTTGAGACTCCCCTTTCCT +
Preference number: 4 (lower is better)
Translates to: KNVLVNHCSQYL*VNSPALRLPFP
Trigger: AGGAAAGGGGAGTCTCAAAGCTGGAGAGTTTACCAACAAATATTGACTGCAGTGATTAACCAAGACATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
3UTR CAA 72 bp CAAGAAAAGTCATGGTCTGAAGAGATAAAGCAATCATaGGAACCAGATAGAGACATGACACGTGTCAGAATT +
Preference number: 4 (lower is better)
Translates to: QEKSWSEEIKQS*EPDRDMTRVRI
Trigger: AATTCTGACACGTGTCATGTCTCTATCTGGTTCCAATGATTGCTTTATCTCTTCAGACCATGACTTTTCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR TCA 90 bp CCAAAGCTTAATCTCCCCTGGATCATTCTGTTATATGATACAGTAAGTTTTCTTATAAATCAGCTCAACTaGAGCCACATCCAAAGCTGT +
Preference number: 4 (lower is better)
Translates to: PKLNLPWIILLYDTVSFLINQLN*SHIQSC
Trigger: ACAGCTTTGGATGTGGCTTCAGTTGAGCTGATTTAT...AAGAAAACTTACTGTATCATATAACAGAATGATCCAGGGGAGATTAAGCTTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR TCA 90 bp AAGTATGGACAGAGATACCCCATTTCTAGAATCCATCCCATATTTCACTTTTTAATAAATCAGCTCAACTaGAGCCACATCCAAAGCTGT +
Preference number: 4 (lower is better)
Translates to: KYGQRYPISRIHPIFHFLINQLN*SHIQSC
Trigger: ACAGCTTTGGATGTGGCTTCAGTTGAGCTGATTTAT...TAAAAAGTGAAATATGGGATGGATTCTAGAAATGGGGTATCTCTGTCCATACTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR GCA 90 bp AGATCCATGCATGAGTACATAAGAGTCATTACTAATGCACTCATGTCAAGAATATCTATAGTTATTGGGTaGCTTCTGTGTATCCCAGGA +
Preference number: 4 (lower is better)
Translates to: RSMHEYIRVITNALMSRISIVIG*LLCIPG
Trigger: TCCTGGGATACACAGAAGGCACCCAATAACTATAGA...TATTCTTGACATGAGTGCATTAGTAATGACTCTTATGTACTCATGCATGGATCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280200.8
ENST00000577287.5
ENST00000581982.5
ENST00000582621.6
CDS-3UTR GCA 90 bp GATTCAGAAGCCAGTTTATGCCCATACTTAATTCTAGACACAACATTTAAGCCCAAGCTTGCTTCACCATaGAAACCAATAAATTCACTC +
Preference number: 4 (lower is better)
Translates to: DSEASLCPYLILDTTFKPKLASP*KPINSL
Trigger: GAGTGAATTTATTGGTTTGCATGGTGAAGCAAGCTT...GGGCTTAAATGTTGTGTCTAGAATTAAGTATGGGCATAAACTGGCTTCTGAATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR GCA 90 bp AAGTATGGACAGAGATACCCCATTTCTAGAATCCATCCCATATTTCACTTTTTAGAGGCTTTGCAATACTaGAGTGGTTTGCTACAAAAG +
Preference number: 4 (lower is better)
Translates to: KYGQRYPISRIHPIFHFLEALQY*SGLLQK
Trigger: CTTTTGTAGCAAACCACTGCAGTATTGCAAAGCCTC...TAAAAAGTGAAATATGGGATGGATTCTAGAAATGGGGTATCTCTGTCCATACTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR GCA 90 bp ATCCAACACTCTGGAAAGGGATTCAGAAGCCAGTTTATGCCCATACTTAATTCTGTAGAAATTTTTCCCTaGTATTTCTCCATGGCAAAT +
Preference number: 4 (lower is better)
Translates to: IQHSGKGFRSQFMPILNSVEIFP*YFSMAN
Trigger: ATTTGCCATGGAGAAATAGCAGGGAAAAATTTCTAC...AGAATTAAGTATGGGCATAAACTGGCTTCTGAATCCCTTTCCAGAGTGTTGGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR GCA 90 bp CTCAGAAAACTTAGTATCACTGAGAGTATATTGGAGAGCTCAAAGTCTTACTCATTTTATAATGTGACATaGAGATCCCCAGCACAATGC +
Preference number: 4 (lower is better)
Translates to: LRKLSITESILESSKSYSFYNVT*RSPAQC
Trigger: GCATTGTGCTGGGGATCTGCATGTCACATTATAAAA...TGAGTAAGACTTTGAGCTCTCCAATATACTCTCAGTGATACTAAGTTTTCTGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000582621.6
CDS-3UTR CCA 90 bp AAGTATGGACAGAGATACCCCATTTCTAGAATCCATCCCATATTTCACTTTTTAGACTTCTATAGTTATTaGGTGCCTTCTGTGTATCCC +
Preference number: 4 (lower is better)
Translates to: KYGQRYPISRIHPIFHFLDFYSY*VPSVYP
Trigger: GGGATACACAGAAGGCACCCAATAACTATAGAAGTC...TAAAAAGTGAAATATGGGATGGATTCTAGAAATGGGGTATCTCTGTCCATACTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR CCA 90 bp AGATCCATGCATGAGTACATAAGAGTCATTACTAATGCACTCATGTCAAGAATAGACTTCTATAGTTATTaGGTGCCTTCTGTGTATCCC +
Preference number: 4 (lower is better)
Translates to: RSMHEYIRVITNALMSRIDFYSY*VPSVYP
Trigger: GGGATACACAGAAGGCACCCAATAACTATAGAAGTC...TATTCTTGACATGAGTGCATTAGTAATGACTCTTATGTACTCATGCATGGATCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280200.8
ENST00000577287.5
ENST00000581982.5
ENST00000582621.6
CDS-3UTR CCA 90 bp AAGTATGGACAGAGATACCCCATTTCTAGAATCCATCCCATATTTCACTTTTTAGCAGTGTGTTCTGTTTaGAAAGTAAGTTGTACCCTG +
Preference number: 4 (lower is better)
Translates to: KYGQRYPISRIHPIFHFLAVCSV*KVSCTL
Trigger: CAGGGTACAACTTACTTTCCAAACAGAACACACTGC...TAAAAAGTGAAATATGGGATGGATTCTAGAAATGGGGTATCTCTGTCCATACTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CCA 90 bp ATCCAACACTCTGGAAAGGGATTCAGAAGCCAGTTTATGCCCATACTTAATTCTGTACTTTTGGATACCTaGCATAAAGGATGTAATGAA +
Preference number: 4 (lower is better)
Translates to: IQHSGKGFRSQFMPILNSVLLDT*HKGCNE
Trigger: TTCATTACATCCTTTATGCCAGGTATCCAAAAGTAC...AGAATTAAGTATGGGCATAAACTGGCTTCTGAATCCCTTTCCAGAGTGTTGGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR CAA 72 bp AACAAAAATGTCTTGGTTAATCACTGCAGTCAATATTaGTTGGTAAACTCTCCAGCTTTGAGACTCCCCTTT +
Preference number: 4 (lower is better)
Translates to: NKNVLVNHCSQY*LVNSPALRLPF
Trigger: AAAGGGGAGTCTCAAAGCTGGAGAGTTTACCAACAAATATTGACTGCAGTGATTAACCAAGACATTTTTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
3UTR CAA 72 bp CTTGTGGCTTGTGCTACAAATTTTCCTTATTACCTTTaGCCTCTGGACTTGAATATTTGTATAAGGCCTGAT +
Preference number: 4 (lower is better)
Translates to: LVACATNFPYYL*PLDLNICIRPD
Trigger: ATCAGGCCTTATACAAATATTCAAGTCCAGAGGCAAAAGGTAATAAGGAAAATTTGTAGCACAAGCCACAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR CAA 72 bp AGAAGCCTAATATCTAAATATATAGACATAGAACCCTaGACAATGCTTTACTTCTGTGGCTCCTCTTACCCA +
Preference number: 4 (lower is better)
Translates to: RSLISKYIDIEP*TMLYFCGSSYP
Trigger: TGGGTAAGAGGAGCCACAGAAGTAAAGCATTGTCAAGGGTTCTATGTCTATATATTTAGATATTAGGCTTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR TCA 90 bp CTCAGAAAACTTAGTATCACTGAGAGTATATTGGAGAGCTCAAAGTCTTACTCATTTGGAATAAGTCAGTaGATAAAAATAGGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: LRKLSITESILESSKSYSFGISQ*IKIGAQ
Trigger: CTGAGCCCCTATTTTTATTCACTGACTTATTCCAAA...TGAGTAAGACTTTGAGCTCTCCAATATACTCTCAGTGATACTAAGTTTTCTGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR TCA 90 bp CTCAGAAAACTTAGTATCACTGAGAGTATATTGGAGAGCTCAAAGTCTTACTCACACTCAACAGCAGAATaGACATTCTTCTTAAGATCA +
Preference number: 4 (lower is better)
Translates to: LRKLSITESILESSKSYSHSTAE*TFFLRS
Trigger: TGATCTTAAGAAGAATGTTCATTCTGCTGTTGAGTG...TGAGTAAGACTTTGAGCTCTCCAATATACTCTCAGTGATACTAAGTTTTCTGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR GCA 90 bp AAGTATGGACAGAGATACCCCATTTCTAGAATCCATCCCATATTTCACTTTTTAGGAGATACAAGCTGCTaGCTTCCAGATATATTTAAG +
Preference number: 4 (lower is better)
Translates to: KYGQRYPISRIHPIFHFLGDTSC*LPDIFK
Trigger: CTTAAATATATCTGGAAGGCAGCAGCTTGTATCTCC...TAAAAAGTGAAATATGGGATGGATTCTAGAAATGGGGTATCTCTGTCCATACTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR GCA 90 bp GATTCAGAAGCCAGTTTATGCCCATACTTAATTCTAGACACAACATTTAAGCCCTCTCCTTGTGGCTTGTaGTACAAATTTTCCTTATTA +
Preference number: 4 (lower is better)
Translates to: DSEASLCPYLILDTTFKPSPCGL*YKFSLL
Trigger: TAATAAGGAAAATTTGTAGCACAAGCCACAAGGAGA...GGGCTTAAATGTTGTGTCTAGAATTAAGTATGGGCATAAACTGGCTTCTGAATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CCA 90 bp AGATCCATGCATGAGTACATAAGAGTCATTACTAATGCACTCATGTCAAGAATAACAAAGAGGGTATATTaGTTATCGGTTTTACCCTCG +
Preference number: 4 (lower is better)
Translates to: RSMHEYIRVITNALMSRITKRVY*LSVLPS
Trigger: CGAGGGTAAAACCGATAACCAATATACCCTCTTTGT...TATTCTTGACATGAGTGCATTAGTAATGACTCTTATGTACTCATGCATGGATCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280200.8
ENST00000577287.5
ENST00000581982.5
ENST00000582621.6
CDS-3UTR CCA 90 bp CCAAAGCTTAATCTCCCCTGGATCATTCTGTTATATGATACAGTAAGTTTTCTTACAAAGAGGGTATATTaGTTATCGGTTTTACCCTCG +
Preference number: 4 (lower is better)
Translates to: PKLNLPWIILLYDTVSFLTKRVY*LSVLPS
Trigger: CGAGGGTAAAACCGATAACCAATATACCCTCTTTGT...AAGAAAACTTACTGTATCATATAACAGAATGATCCAGGGGAGATTAAGCTTTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR CCA 90 bp CCAAAGCTTAATCTCCCCTGGATCATTCTGTTATATGATACAGTAAGTTTTCTTTGGATTCTAGAAGTATaGACAGAGATACCCCATTTC +
Preference number: 4 (lower is better)
Translates to: PKLNLPWIILLYDTVSFLWILEV*TEIPHF
Trigger: GAAATGGGGTATCTCTGTCCATACTTCTAGAATCCA...AAGAAAACTTACTGTATCATATAACAGAATGATCCAGGGGAGATTAAGCTTTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR CCA 90 bp GATTCAGAAGCCAGTTTATGCCCATACTTAATTCTAGACACAACATTTAAGCCCTTTGCAATACTGCAGTaGTTTGCTACAAAAGTCTTT +
Preference number: 4 (lower is better)
Translates to: DSEASLCPYLILDTTFKPFAILQ*FATKVF
Trigger: AAAGACTTTTGTAGCAAACCACTGCAGTATTGCAAA...GGGCTTAAATGTTGTGTCTAGAATTAAGTATGGGCATAAACTGGCTTCTGAATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CCA 90 bp CCAAAGCTTAATCTCCCCTGGATCATTCTGTTATATGATACAGTAAGTTTTCTTCCTGCTATTTCTCCATaGCAAATGAAAGTAGTGATC +
Preference number: 4 (lower is better)
Translates to: PKLNLPWIILLYDTVSFLPAISP*QMKVVI
Trigger: GATCACTACTTTCATTTGCCATGGAGAAATAGCAGG...AAGAAAACTTACTGTATCATATAACAGAATGATCCAGGGGAGATTAAGCTTTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CCA 90 bp CTCAGAAAACTTAGTATCACTGAGAGTATATTGGAGAGCTCAAAGTCTTACTCACACTGTAAGTACTTTTaGATACCTGGCATAAAGGAT +
Preference number: 4 (lower is better)
Translates to: LRKLSITESILESSKSYSHCKYF*IPGIKD
Trigger: ATCCTTTATGCCAGGTATCCAAAAGTACTTACAGTG...TGAGTAAGACTTTGAGCTCTCCAATATACTCTCAGTGATACTAAGTTTTCTGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CCA 90 bp CTCAGAAAACTTAGTATCACTGAGAGTATATTGGAGAGCTCAAAGTCTTACTCATCACTGAGAGTATATTaGAGAGCTCAAAGTCTTACT +
Preference number: 4 (lower is better)
Translates to: LRKLSITESILESSKSYSSLRVY*RAQSLT
Trigger: AGTAAGACTTTGAGCTCTCCAATATACTCTCAGTGA...TGAGTAAGACTTTGAGCTCTCCAATATACTCTCAGTGATACTAAGTTTTCTGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CCA 90 bp AAGTATGGACAGAGATACCCCATTTCTAGAATCCATCCCATATTTCACTTTTTAAATGCTTGTGAAATCTaGTGCTTTAGACTGAGCTCT +
Preference number: 4 (lower is better)
Translates to: KYGQRYPISRIHPIFHFLNACEI*CFRLSS
Trigger: AGAGCTCAGTCTAAAGCACCAGATTTCACAAGCATT...TAAAAAGTGAAATATGGGATGGATTCTAGAAATGGGGTATCTCTGTCCATACTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR TCA 90 bp AAGTATGGACAGAGATACCCCATTTCTAGAATCCATCCCATATTTCACTTTTTAATTGGAAGCCATCGTTaGATTCAAAAAGTAAACCCT +
Preference number: 4 (lower is better)
Translates to: KYGQRYPISRIHPIFHFLIGSHR*IQKVNP
Trigger: AGGGTTTACTTTTTGAATTCAACGATGGCTTCCAAT...TAAAAAGTGAAATATGGGATGGATTCTAGAAATGGGGTATCTCTGTCCATACTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR TCA 90 bp AGATCCATGCATGAGTACATAAGAGTCATTACTAATGCACTCATGTCAAGAATAAGAAGGTTGGATAGTTaGCATAAATATCCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: RSMHEYIRVITNALMSRIRRLDS*HKYPLL
Trigger: CAAGAGAGGATATTTATGTCAACTATCCAACCTTCT...TATTCTTGACATGAGTGCATTAGTAATGACTCTTATGTACTCATGCATGGATCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280200.8
ENST00000577287.5
ENST00000581982.5
ENST00000582621.6
CDS-3UTR TCA 90 bp CCAAAGCTTAATCTCCCCTGGATCATTCTGTTATATGATACAGTAAGTTTTCTTAGAAGGTTGGATAGTTaGCATAAATATCCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: PKLNLPWIILLYDTVSFLRRLDS*HKYPLL
Trigger: CAAGAGAGGATATTTATGTCAACTATCCAACCTTCT...AAGAAAACTTACTGTATCATATAACAGAATGATCCAGGGGAGATTAAGCTTTGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR TCA 90 bp AGATCCATGCATGAGTACATAAGAGTCATTACTAATGCACTCATGTCAAGAATACACAGAATCTTTGATTaGTCTGATAGTAGAGTGCTT +
Preference number: 4 (lower is better)
Translates to: RSMHEYIRVITNALMSRIHRIFD*SDSRVL
Trigger: AAGCACTCTACTATCAGATCAATCAAAGATTCTGTG...TATTCTTGACATGAGTGCATTAGTAATGACTCTTATGTACTCATGCATGGATCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR TCA 90 bp AAGTATGGACAGAGATACCCCATTTCTAGAATCCATCCCATATTTCACTTTTTATCTCTGGAAACTGTTTaGAAGGCTGGTTCTATTAAA +
Preference number: 4 (lower is better)
Translates to: KYGQRYPISRIHPIFHFLSLETV*KAGSIK
Trigger: TTTAATAGAACCAGCCTTTCAAACAGTTTCCAGAGA...TAAAAAGTGAAATATGGGATGGATTCTAGAAATGGGGTATCTCTGTCCATACTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582621.6
CDS-3UTR GCA 90 bp CTCAGAAAACTTAGTATCACTGAGAGTATATTGGAGAGCTCAAAGTCTTACTCAGTCTTGGTTAATCACTaGAGTCAATATTTGTTGGTA +
Preference number: 4 (lower is better)
Translates to: LRKLSITESILESSKSYSVLVNH*SQYLLV
Trigger: TACCAACAAATATTGACTGCAGTGATTAACCAAGAC...TGAGTAAGACTTTGAGCTCTCCAATATACTCTCAGTGATACTAAGTTTTCTGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CCA 90 bp CTCAGAAAACTTAGTATCACTGAGAGTATATTGGAGAGCTCAAAGTCTTACTCAAAAGAGTCATGTTATTaGAAGCCATCGTTGAATTCA +
Preference number: 4 (lower is better)
Translates to: LRKLSITESILESSKSYSKESCY*KPSLNS
Trigger: TGAATTCAACGATGGCTTCCAATAACATGACTCTTT...TGAGTAAGACTTTGAGCTCTCCAATATACTCTCAGTGATACTAAGTTTTCTGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CCA 90 bp AGATCCATGCATGAGTACATAAGAGTCATTACTAATGCACTCATGTCAAGAATATCTGCGAGAGAAGGTTaGATAGTTGACATAAATATC +
Preference number: 4 (lower is better)
Translates to: RSMHEYIRVITNALMSRISAREG*IVDINI
Trigger: GATATTTATGTCAACTATCCAACCTTCTCTCGCAGA...TATTCTTGACATGAGTGCATTAGTAATGACTCTTATGTACTCATGCATGGATCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280200.8
ENST00000577287.5
ENST00000581982.5
ENST00000582621.6
CDS-3UTR CCA 90 bp AAGTATGGACAGAGATACCCCATTTCTAGAATCCATCCCATATTTCACTTTTTACACTGTAAGTACTTTTaGATACCTGGCATAAAGGAT +
Preference number: 4 (lower is better)
Translates to: KYGQRYPISRIHPIFHFLHCKYF*IPGIKD
Trigger: ATCCTTTATGCCAGGTATCCAAAAGTACTTACAGTG...TAAAAAGTGAAATATGGGATGGATTCTAGAAATGGGGTATCTCTGTCCATACTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CCA 90 bp AAGTATGGACAGAGATACCCCATTTCTAGAATCCATCCCATATTTCACTTTTTATCACTGAGAGTATATTaGAGAGCTCAAAGTCTTACT +
Preference number: 4 (lower is better)
Translates to: KYGQRYPISRIHPIFHFLSLRVY*RAQSLT
Trigger: AGTAAGACTTTGAGCTCTCCAATATACTCTCAGTGA...TAAAAAGTGAAATATGGGATGGATTCTAGAAATGGGGTATCTCTGTCCATACTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CCA 90 bp AAGTATGGACAGAGATACCCCATTTCTAGAATCCATCCCATATTTCACTTTTTAAGGCAAGAAAAGTCATaGTCTGAAGAGATAAAGCAA +
Preference number: 4 (lower is better)
Translates to: KYGQRYPISRIHPIFHFLRQEKS*SEEIKQ
Trigger: TTGCTTTATCTCTTCAGACCATGACTTTTCTTGCCT...TAAAAAGTGAAATATGGGATGGATTCTAGAAATGGGGTATCTCTGTCCATACTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
3UTR CAA 72 bp TCACCATGCAAACCAATAAATTCACTCACAGAATCTTaGATTGATCTGATAGTAGAGTGCTTTCTTGTAAAC +
Preference number: 4 (lower is better)
Translates to: SPCKPINSLTES*IDLIVECFLVN
Trigger: GTTTACAAGAAAGCACTCTACTATCAGATCAATCAAAGATTCTGTGAGTGAATTTATTGGTTTGCATGGTGA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR GCA 90 bp AGATCCATGCATGAGTACATAAGAGTCATTACTAATGCACTCATGTCAAGAATAAAAATAATAACTAGGTaGCTGACCCTTTTGAGAGAA +
Preference number: 4 (lower is better)
Translates to: RSMHEYIRVITNALMSRIKIITR*LTLLRE
Trigger: TTCTCTCAAAAGGGTCAGGCACCTAGTTATTATTTT...TATTCTTGACATGAGTGCATTAGTAATGACTCTTATGTACTCATGCATGGATCT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR GCA 90 bp CCAAAGCTTAATCTCCCCTGGATCATTCTGTTATATGATACAGTAAGTTTTCTTAAAATAATAACTAGGTaGCTGACCCTTTTGAGAGAA +
Preference number: 4 (lower is better)
Translates to: PKLNLPWIILLYDTVSFLKIITR*LTLLRE
Trigger: TTCTCTCAAAAGGGTCAGGCACCTAGTTATTATTTT...AAGAAAACTTACTGTATCATATAACAGAATGATCCAGGGGAGATTAAGCTTTGG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR CCA 90 bp AAGTATGGACAGAGATACCCCATTTCTAGAATCCATCCCATATTTCACTTTTTAGTACTTTTGGATACCTaGCATAAAGGATGTAATGAA +
Preference number: 4 (lower is better)
Translates to: KYGQRYPISRIHPIFHFLVLLDT*HKGCNE
Trigger: TTCATTACATCCTTTATGCCAGGTATCCAAAAGTAC...TAAAAAGTGAAATATGGGATGGATTCTAGAAATGGGGTATCTCTGTCCATACTT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS TCA 90 bp TTCTCCTGCGCTGGCCTGCAAGTAGCAGCGGTAAAGCCCCGAGTCTaGGACTGTGACATCGGGGATGACGATGACGCTCCACCTTCCGTG +
Preference number: 5 (lower is better)
Translates to: FSCAGLQVAAVKPRV*DCDIGDDDDAPPSV
Trigger: CACGGAAGGTGGAGCGTCATCGTCATCCCCGATGTCACAGTCTCAGACTCGGGGCTTTACCGCTGCTACTTGCAGGCCAGCGCAGGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000280200.8
ENST00000577287.5
ENST00000579496.5
ENST00000581982.5
ENST00000582621.6
CDS-3UTR CAA 90 bp CTCTGCCAAGCACAATTCCCAAACCTCATCCCAGCCCCTGAAGTCTCCCTGTCCACACCAGGATGGCAGTaGTGTGCCTCTCCTTCTAGC +
Preference number: 5 (lower is better)
Translates to: LCQAQFPNLIPAPEVSLSTPGWQ*CASPSS
Trigger: GCTAGAAGGAGAGGCACACAACTGCCATCCTGGTGT...GGACAGGGAGACTTCAGGGGCTGGGATGAGGTTTGGGAATTGTGCTTGGCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS TCA 90 bp GCTCCCTGTGGCCATCCATCTGAGCTACGTGAGGAGGATTCCATGTaGACGCCGATCAGCTTCCATTTAACCCTCGGCTACAGTCAATCT +
Preference number: 5 (lower is better)
Translates to: APCGHPSELREEDSM*TPISFHLTLGYSQS
Trigger: AGATTGACTGTAGCCGAGGGTTAAATGGAAGCTGATCGGCGTTCACATGGAATCCTCCTCACGTAGCTCAGATGGATGGCCACAGGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578928.1
CDS-3UTR CAA 90 bp CTCTGCCAAGCACAATTCCCAAACCTCATCCCAGCCCCTGAAGTCTCCCTGTCCGCAGTTGCTCACTATTaGTCTTGGGAACTTGGAGGT +
Preference number: 5 (lower is better)
Translates to: LCQAQFPNLIPAPEVSLSAVAHY*SWELGG
Trigger: ACCTCCAAGTTCCCAAGACAAATAGTGAGCAACTGC...GGACAGGGAGACTTCAGGGGCTGGGATGAGGTTTGGGAATTGTGCTTGGCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CAA 90 bp CTCTGCCAAGCACAATTCCCAAACCTCATCCCAGCCCCTGAAGTCTCCCTGTCCGATTCCTTTCTCCTGTaGCCTGTACCCTCCCAATTT +
Preference number: 5 (lower is better)
Translates to: LCQAQFPNLIPAPEVSLSDSFLL*PVPSQF
Trigger: AAATTGGGAGGGTACAGGCAACAGGAGAAAGGAATC...GGACAGGGAGACTTCAGGGGCTGGGATGAGGTTTGGGAATTGTGCTTGGCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS CCA 90 bp CCATCTGCGTCTTGGTTAAGGACTTTTATCGTATCCTGTTTATCGTaGCCTCCTAGCCTCAACACCCTCTTGGTCACTGCAAGCTCCCCG +
Preference number: 5 (lower is better)
Translates to: PSASWLRTFIVSCLS*PPSLNTLLVTASSP
Trigger: CGGGGAGCTTGCAGTGACCAAGAGGGTGTTGAGGCTAGGAGGCCACGATAAACAGGATACGATAAAAGTCCTTAACCAAGACGCAGATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000580335.1
ENST00000581982.5
CDS CCA 90 bp TCTGAGACTGTGACATCGGGGATGACGATGACGCTCCACCTTCCGTaGCTGCAGTTGCTCACTATTTGTCTTGGGAACTTGGAGGTGAAA +
Preference number: 5 (lower is better)
Translates to: SETVTSGMTMTLHLP*LQLLTICLGNLEVK
Trigger: TTTCACCTCCAAGTTCCCAAGACAAATAGTGAGCAACTGCAGCCACGGAAGGTGGAGCGTCATCGTCATCCCCGATGTCACAGTCTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000280200.8
ENST00000577287.5
ENST00000579496.5
ENST00000581982.5
ENST00000582621.6
CDS-3UTR CAA 90 bp AGGAAAGCCTGCATGAGAGTGAGGCCAAGACCAGGGAAATGGATCCAACACTCTGCCCAGTATTGTGCTTaGACCCTGCTTCTCAGCTCT +
Preference number: 5 (lower is better)
Translates to: RKACMRVRPRPGKWIQHSAQYCA*TLLLSS
Trigger: AGAGCTGAGAAGCAGGGTCAAAGCACAATACTGGGC...AGAGTGTTGGATCCATTTCCCTGGTCTTGGCCTCACTCTCATGCAGGCTTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR CAA 90 bp AGGAAAGCCTGCATGAGAGTGAGGCCAAGACCAGGGAAATGGATCCAACACTCTGCCACATGTTGTGTTTaGCAAGCCTACTCCATCGGG +
Preference number: 5 (lower is better)
Translates to: RKACMRVRPRPGKWIQHSATCCV*QAYSIG
Trigger: CCCGATGGAGTAGGCTTGCAAAACACAACATGTGGC...AGAGTGTTGGATCCATTTCCCTGGTCTTGGCCTCACTCTCATGCAGGCTTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CAA 90 bp CTCTGCCAAGCACAATTCCCAAACCTCATCCCAGCCCCTGAAGTCTCCCTGTCCCGCAGTGTGTTCTGTTaGGAAAGTAAGTTGTACCCT +
Preference number: 5 (lower is better)
Translates to: LCQAQFPNLIPAPEVSLSRSVFC*ESKLYP
Trigger: AGGGTACAACTTACTTTCCAAACAGAACACACTGCG...GGACAGGGAGACTTCAGGGGCTGGGATGAGGTTTGGGAATTGTGCTTGGCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CAA 90 bp CTCTGCCAAGCACAATTCCCAAACCTCATCCCAGCCCCTGAAGTCTCCCTGTCCTTCCACAAACAAACGTaGCATAAAAGGCCTCAGGAC +
Preference number: 5 (lower is better)
Translates to: LCQAQFPNLIPAPEVSLSFHKQT*HKRPQD
Trigger: GTCCTGAGGCCTTTTATGCAACGTTTGTTTGTGGAA...GGACAGGGAGACTTCAGGGGCTGGGATGAGGTTTGGGAATTGTGCTTGGCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CAA 90 bp CTCTGCCAAGCACAATTCCCAAACCTCATCCCAGCCCCTGAAGTCTCCCTGTCCATTTGTCTTGGGAACTaGGAGGTGAAATTTCTGCCA +
Preference number: 5 (lower is better)
Translates to: LCQAQFPNLIPAPEVSLSICLGN*EVKFLP
Trigger: TGGCAGAAATTTCACCTCCAAGTTCCCAAGACAAAT...GGACAGGGAGACTTCAGGGGCTGGGATGAGGTTTGGGAATTGTGCTTGGCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CAA 90 bp CTCTGCCAAGCACAATTCCCAAACCTCATCCCAGCCCCTGAAGTCTCCCTGTCCGTCTTTCTAAGGAAGTaGACGTTGGTAGAATTCCTG +
Preference number: 5 (lower is better)
Translates to: LCQAQFPNLIPAPEVSLSVFLRK*TLVEFL
Trigger: CAGGAATTCTACCAACGTCAACTTCCTTAGAAAGAC...GGACAGGGAGACTTCAGGGGCTGGGATGAGGTTTGGGAATTGTGCTTGGCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CAA 90 bp GGCCAAGACCAGGGAAATGGATCCAACACTCTGGAAAGGGATTCAGAAGCCAGTATTGCTGGCATCTGTTaGTGGACTGGTGTGAGCAAG +
Preference number: 5 (lower is better)
Translates to: GQDQGNGSNTLERDSEASIAGIC*WTGVSK
Trigger: CTTGCTCACACCAGTCCACAAACAGATGCCAGCAAT...ACTGGCTTCTGAATCCCTTTCCAGAGTGTTGGATCCATTTCCCTGGTCTTGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CAA 90 bp TCCTGTCTTTCTGGTGAGCGTTTCCTTGTTGCTGACAATGTTGCTCCCTGTGGCTTGTTGCTGACAATGTaGCTCCCTGTGGCCATCCAT +
Preference number: 5 (lower is better)
Translates to: SCLSGERFLVADNVAPCGLLLTM*LPVAIH
Trigger: ATGGATGGCCACAGGGAGCAACATTGTCAGCAACAA...GCCACAGGGAGCAACATTGTCAGCAACAAGGAAACGCTCACCAGAAAGACAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578928.1
CDS-3UTR CAA 90 bp GGCCAAGACCAGGGAAATGGATCCAACACTCTGGAAAGGGATTCAGAAGCCAGTGACGTCAGAGAATTTTaGGGAGGACTTCAGATGGCT +
Preference number: 5 (lower is better)
Translates to: GQDQGNGSNTLERDSEASDVREF*GGLQMA
Trigger: AGCCATCTGAAGTCCTCCCAAAAATTCTCTGACGTC...ACTGGCTTCTGAATCCCTTTCCAGAGTGTTGGATCCATTTCCCTGGTCTTGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CAA 90 bp CTACTACATTTGCTCCTAAGGCTAGACCTGGGATGGCGGCAAGAATTCTATACAACACCAGGATGGCAGTaGTGTGCCTCTCCTTCTAGC +
Preference number: 5 (lower is better)
Translates to: LLHLLLRLDLGWRQEFYTTPGWQ*CASPSS
Trigger: GCTAGAAGGAGAGGCACACAACTGCCATCCTGGTGT...TGTATAGAATTCTTGCCGCCATCCCAGGTCTAGCCTTAGGAGCAAATGTAGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CAA 90 bp GGCCAAGACCAGGGAAATGGATCCAACACTCTGGAAAGGGATTCAGAAGCCAGTTGGAGTTGCCACATGTaGTGTTTTGCAAGCCTACTC +
Preference number: 5 (lower is better)
Translates to: GQDQGNGSNTLERDSEASWSCHM*CFASLL
Trigger: GAGTAGGCTTGCAAAACACAACATGTGGCAACTCCA...ACTGGCTTCTGAATCCCTTTCCAGAGTGTTGGATCCATTTCCCTGGTCTTGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CAA 90 bp GGCCAAGACCAGGGAAATGGATCCAACACTCTGGAAAGGGATTCAGAAGCCAGTACCACAGGTAGAAGATaGGCTCTGCTTTCTTCCTGT +
Preference number: 5 (lower is better)
Translates to: GQDQGNGSNTLERDSEASTTGRR*ALLSSC
Trigger: ACAGGAAGAAAGCAGAGCCAATCTTCTACCTGTGGT...ACTGGCTTCTGAATCCCTTTCCAGAGTGTTGGATCCATTTCCCTGGTCTTGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CAA 90 bp GGCCAAGACCAGGGAAATGGATCCAACACTCTGGAAAGGGATTCAGAAGCCAGTACAAGGATGTATGAATaGCCAAGAGTTGGCAGCCAT +
Preference number: 5 (lower is better)
Translates to: GQDQGNGSNTLERDSEASTRMYE*PRVGSH
Trigger: ATGGCTGCCAACTCTTGGCAATTCATACATCCTTGT...ACTGGCTTCTGAATCCCTTTCCAGAGTGTTGGATCCATTTCCCTGGTCTTGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR CAA 90 bp AGGAAAGCCTGCATGAGAGTGAGGCCAAGACCAGGGAAATGGATCCAACACTCTAATGTTCTGGAGGCTTaGCAATACTGCAGTGGTTTG +
Preference number: 5 (lower is better)
Translates to: RKACMRVRPRPGKWIQHSNVLEA*QYCSGL
Trigger: CAAACCACTGCAGTATTGCAAAGCCTCCAGAACATT...AGAGTGTTGGATCCATTTCCCTGGTCTTGGCCTCACTCTCATGCAGGCTTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CAA 90 bp CTCTGCCAAGCACAATTCCCAAACCTCATCCCAGCCCCTGAAGTCTCCCTGTCCACAAACCAATATAACTaGGATGTTCACAATCCACGA +
Preference number: 5 (lower is better)
Translates to: LCQAQFPNLIPAPEVSLSTNQYN*DVHNPR
Trigger: TCGTGGATTGTGAACATCCAAGTTATATTGGTTTGT...GGACAGGGAGACTTCAGGGGCTGGGATGAGGTTTGGGAATTGTGCTTGGCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CAA 90 bp AGGAAAGCCTGCATGAGAGTGAGGCCAAGACCAGGGAAATGGATCCAACACTCTGTATCGAAGCCCAAATaGTTGCTTTCTGCAGGAAAC +
Preference number: 5 (lower is better)
Translates to: RKACMRVRPRPGKWIQHSVSKPK*LLSAGN
Trigger: GTTTCCTGCAGAAAGCAACAATTTGGGCTTCGATAC...AGAGTGTTGGATCCATTTCCCTGGTCTTGGCCTCACTCTCATGCAGGCTTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CAA 90 bp GACAATGTTGCTCCCTGTGGCCATCCATCTGAGCTACGTGAGGAGGATTCCATGGTCCTGGGCTTTTCTTaGGTGGAAGACTTTTATTAC +
Preference number: 5 (lower is better)
Translates to: DNVAPCGHPSELREEDSMVLGFS*VEDFYY
Trigger: GTAATAAAAGTCTTCCACCAAAGAAAAGCCCAGGAC...CATGGAATCCTCCTCACGTAGCTCAGATGGATGGCCACAGGGAGCAACATTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578928.1
CDS-3UTR CAA 90 bp GATTCAGAAGCCAGTTTATGCCCATACTTAATTCTAGACACAACATTTAAGCCCAGCCTCAACACCCTCTaGGTCACTGCAAGCTCCCCG +
Preference number: 5 (lower is better)
Translates to: DSEASLCPYLILDTTFKPSLNTL*VTASSP
Trigger: CGGGGAGCTTGCAGTGACCAAGAGGGTGTTGAGGCT...GGGCTTAAATGTTGTGTCTAGAATTAAGTATGGGCATAAACTGGCTTCTGAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000581982.5
CDS-3UTR CAA 90 bp AGGAAAGCCTGCATGAGAGTGAGGCCAAGACCAGGGAAATGGATCCAACACTCTATTTGTCTTGGGAACTaGGAGGTGAAATTTCTGCCA +
Preference number: 5 (lower is better)
Translates to: RKACMRVRPRPGKWIQHSICLGN*EVKFLP
Trigger: TGGCAGAAATTTCACCTCCAAGTTCCCAAGACAAAT...AGAGTGTTGGATCCATTTCCCTGGTCTTGGCCTCACTCTCATGCAGGCTTTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR CAA 90 bp TTCCCTCCCAAATTTCTACCCTACCGTCCTATGCCACCACTTTCAACTGTCACTCTGAATTGCCCAGTATaGTGCTTTGACCCTGCTTCT +
Preference number: 5 (lower is better)
Translates to: FPPKFLPYRPMPPLSTVTLNCPV*CFDPAS
Trigger: AGAAGCAGGGTCAAAGCACAATACTGGGCAATTCAG...AGTGACAGTTGAAAGTGGTGGCATAGGACGGTAGGGTAGAAATTTGGGAGGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR CAA 90 bp AGGAAAGCCTGCATGAGAGTGAGGCCAAGACCAGGGAAATGGATCCAACACTCTGTCTTTCTAAGGAAGTaGACGTTGGTAGAATTCCTG +
Preference number: 5 (lower is better)
Translates to: RKACMRVRPRPGKWIQHSVFLRK*TLVEFL
Trigger: CAGGAATTCTACCAACGTCAACTTCCTTAGAAAGAC...AGAGTGTTGGATCCATTTCCCTGGTCTTGGCCTCACTCTCATGCAGGCTTTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CAA 90 bp CTACTACATTTGCTCCTAAGGCTAGACCTGGGATGGCGGCAAGAATTCTATACACGTTTCCCACTGGAGTaGCCACATGTTGTGTTTTGC +
Preference number: 5 (lower is better)
Translates to: LLHLLLRLDLGWRQEFYTRFPLE*PHVVFC
Trigger: GCAAAACACAACATGTGGCAACTCCAGTGGGAAACG...TGTATAGAATTCTTGCCGCCATCCCAGGTCTAGCCTTAGGAGCAAATGTAGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CAA 90 bp TTCCCTCCCAAATTTCTACCCTACCGTCCTATGCCACCACTTTCAACTGTCACTAGGGCCTCCACTTATTaGACCACAGGTAGAAGATTG +
Preference number: 5 (lower is better)
Translates to: FPPKFLPYRPMPPLSTVTRASTY*TTGRRL
Trigger: CAATCTTCTACCTGTGGTCAAATAAGTGGAGGCCCT...AGTGACAGTTGAAAGTGGTGGCATAGGACGGTAGGGTAGAAATTTGGGAGGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CAA 90 bp GGCCAAGACCAGGGAAATGGATCCAACACTCTGGAAAGGGATTCAGAAGCCAGTCAATTATCAGTTGACTaGGAACCCCGAAGGAAGAAT +
Preference number: 5 (lower is better)
Translates to: GQDQGNGSNTLERDSEASQLSVD*EPRRKN
Trigger: ATTCTTCCTTCGGGGTTCCAAGTCAACTGATAATTG...ACTGGCTTCTGAATCCCTTTCCAGAGTGTTGGATCCATTTCCCTGGTCTTGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CAA 90 bp AGGAAAGCCTGCATGAGAGTGAGGCCAAGACCAGGGAAATGGATCCAACACTCTTCCAATCGCATAGACTaGACATGTTATCTCCTTGTG +
Preference number: 5 (lower is better)
Translates to: RKACMRVRPRPGKWIQHSSNRID*TCYLLV
Trigger: CACAAGGAGATAACATGTCAAGTCTATGCGATTGGA...AGAGTGTTGGATCCATTTCCCTGGTCTTGGCCTCACTCTCATGCAGGCTTTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS TCA 90 bp TTCCGTGGCTGCAGTTGCTCACTATTTGTCTTGGGAACTTGGAGGTaGAATTTCTGCCATGGACCAAGTTGCAGTAAGTTAAGAGGTCGA +
Preference number: 5 (lower is better)
Translates to: FRGCSCSLFVLGTWR*NFCHGPSCSKLRGR
Trigger: TCGACCTCTTAACTTACTGCAACTTGGTCCATGGCAGAAATTTCACCTCCAAGTTCCCAAGACAAATAGTGAGCAACTGCAGCCACGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000280200.8
ENST00000577287.5
ENST00000579496.5
ENST00000581982.5
ENST00000582621.6
CDS-3UTR CAA 90 bp TCTGCCTTTAGTGTCATCATGTTAAGGCATGGAAGATGTTGCTGCCATGCTTATACTCTGCCCATGCTCTaGAGCTCTTCTCTCTACCAG +
Preference number: 5 (lower is better)
Translates to: SAFSVIMLRHGRCCCHAYTLPML*SSSLYQ
Trigger: CTGGTAGAGAGAAGAGCTCAAGAGCATGGGCAGAGT...ATAAGCATGGCAGCAACATCTTCCATGCCTTAACATGATGACACTAAAGGCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280200.8
CDS-3UTR CAA 90 bp TTCCCTCCCAAATTTCTACCCTACCGTCCTATGCCACCACTTTCAACTGTCACTCTTCCCATCTGCGTCTaGGTTAAGGACTTTTATCGT +
Preference number: 5 (lower is better)
Translates to: FPPKFLPYRPMPPLSTVTLPICV*VKDFYR
Trigger: ACGATAAAAGTCCTTAACCAAGACGCAGATGGGAAG...AGTGACAGTTGAAAGTGGTGGCATAGGACGGTAGGGTAGAAATTTGGGAGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000581982.5
CDS-3UTR CAA 90 bp TCTACCAGACAGAAACAAGGATGTATGAATTGCCAAGAGTTGGCAGCCATCTTGTTGAAAGGCTGGTTCTaGAGATGTGAGTGCTGCTCG +
Preference number: 5 (lower is better)
Translates to: STRQKQGCMNCQELAAILLKGWF*RCECCS
Trigger: CGAGCAGCACTCACATCTCAAGAACCAGCCTTTCAA...CAAGATGGCTGCCAACTCTTGGCAATTCATACATCCTTGTTTCTGTCTGGTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280200.8
CDS-3UTR CAA 90 bp TCTGCCTTTAGTGTCATCATGTTAAGGCATGGAAGATGTTGCTGCCATGCTTATGCCCAGTATTGTGCTTaGACCCTGCTTCTCAGCTCT +
Preference number: 5 (lower is better)
Translates to: SAFSVIMLRHGRCCCHAYAQYCA*TLLLSS
Trigger: AGAGCTGAGAAGCAGGGTCAAAGCACAATACTGGGC...ATAAGCATGGCAGCAACATCTTCCATGCCTTAACATGATGACACTAAAGGCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CAA 90 bp CTACTACATTTGCTCCTAAGGCTAGACCTGGGATGGCGGCAAGAATTCTATACAGTAAACTCTCCAGCTTaGAGACTCCCCTTTCCTCTT +
Preference number: 5 (lower is better)
Translates to: LLHLLLRLDLGWRQEFYTVNSPA*RLPFPL
Trigger: AAGAGGAAAGGGGAGTCTCAAAGCTGGAGAGTTTAC...TGTATAGAATTCTTGCCGCCATCCCAGGTCTAGCCTTAGGAGCAAATGTAGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR CAA 90 bp AGGAAAGCCTGCATGAGAGTGAGGCCAAGACCAGGGAAATGGATCCAACACTCTTGCAGTCAATATTTGTaGGTAAACTCTCCAGCTTTG +
Preference number: 5 (lower is better)
Translates to: RKACMRVRPRPGKWIQHSCSQYL*VNSPAL
Trigger: CAAAGCTGGAGAGTTTACCAACAAATATTGACTGCA...AGAGTGTTGGATCCATTTCCCTGGTCTTGGCCTCACTCTCATGCAGGCTTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR CAA 90 bp TTCCCTCCCAAATTTCTACCCTACCGTCCTATGCCACCACTTTCAACTGTCACTTTCCACAAACAAACGTaGCATAAAAGGCCTCAGGAC +
Preference number: 5 (lower is better)
Translates to: FPPKFLPYRPMPPLSTVTFHKQT*HKRPQD
Trigger: GTCCTGAGGCCTTTTATGCAACGTTTGTTTGTGGAA...AGTGACAGTTGAAAGTGGTGGCATAGGACGGTAGGGTAGAAATTTGGGAGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CAA 90 bp CCAAAGCTTAATCTCCCCTGGATCATTCTGTTATATGATACAGTAAGTTTTCTTAGCCTCAACACCCTCTaGGTCACTGCAAGCTCCCCG +
Preference number: 5 (lower is better)
Translates to: PKLNLPWIILLYDTVSFLSLNTL*VTASSP
Trigger: CGGGGAGCTTGCAGTGACCAAGAGGGTGTTGAGGCT...AAGAAAACTTACTGTATCATATAACAGAATGATCCAGGGGAGATTAAGCTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000581982.5
CDS-3UTR CAA 90 bp CTACTACATTTGCTCCTAAGGCTAGACCTGGGATGGCGGCAAGAATTCTATACACTTCCCATCTGCGTCTaGGTTAAGGACTTTTATCGT +
Preference number: 5 (lower is better)
Translates to: LLHLLLRLDLGWRQEFYTLPICV*VKDFYR
Trigger: ACGATAAAAGTCCTTAACCAAGACGCAGATGGGAAG...TGTATAGAATTCTTGCCGCCATCCCAGGTCTAGCCTTAGGAGCAAATGTAGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000581982.5
CDS-3UTR CAA 90 bp GATTCAGAAGCCAGTTTATGCCCATACTTAATTCTAGACACAACATTTAAGCCCTGCTGGGTCCCGATCTaGAACCACTCCACCTGTGTT +
Preference number: 5 (lower is better)
Translates to: DSEASLCPYLILDTTFKPCWVPI*NHSTCV
Trigger: AACACAGGTGGAGTGGTTCAAGATCGGGACCCAGCA...GGGCTTAAATGTTGTGTCTAGAATTAAGTATGGGCATAAACTGGCTTCTGAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CAA 90 bp GGCCAAGACCAGGGAAATGGATCCAACACTCTGGAAAGGGATTCAGAAGCCAGTAAAAGAGTCATGTTATaGGAAGCCATCGTTGAATTC +
Preference number: 5 (lower is better)
Translates to: GQDQGNGSNTLERDSEASKRVML*EAIVEF
Trigger: GAATTCAACGATGGCTTCCAATAACATGACTCTTTT...ACTGGCTTCTGAATCCCTTTCCAGAGTGTTGGATCCATTTCCCTGGTCTTGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CAA 90 bp CCCAAATTTCTACCCTACCGTCCTATGCCACCACTTTCAACTGTCACTTTTAGTGCAGTTGCTCACTATTaGTCTTGGGAACTTGGAGGT +
Preference number: 5 (lower is better)
Translates to: PKFLPYRPMPPLSTVTFSAVAHY*SWELGG
Trigger: ACCTCCAAGTTCCCAAGACAAATAGTGAGCAACTGC...ACTAAAAGTGACAGTTGAAAGTGGTGGCATAGGACGGTAGGGTAGAAATTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR CAA 90 bp TTCCCTCCCAAATTTCTACCCTACCGTCCTATGCCACCACTTTCAACTGTCACTCACAAAGAGGGTATATaGGTTATCGGTTTTACCCTC +
Preference number: 5 (lower is better)
Translates to: FPPKFLPYRPMPPLSTVTHKEGI*VIGFTL
Trigger: GAGGGTAAAACCGATAACCAATATACCCTCTTTGTG...AGTGACAGTTGAAAGTGGTGGCATAGGACGGTAGGGTAGAAATTTGGGAGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR CAA 90 bp TCTACCAGACAGAAACAAGGATGTATGAATTGCCAAGAGTTGGCAGCCATCTTGATGAATTGCCAAGAGTaGGCAGCCATCTTGCCAACA +
Preference number: 5 (lower is better)
Translates to: STRQKQGCMNCQELAAILMNCQE*AAILPT
Trigger: TGTTGGCAAGATGGCTGCCAACTCTTGGCAATTCAT...CAAGATGGCTGCCAACTCTTGGCAATTCATACATCCTTGTTTCTGTCTGGTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR CAA 90 bp CCCAAATTTCTACCCTACCGTCCTATGCCACCACTTTCAACTGTCACTTTTAGTGTAAACTCTCCAGCTTaGAGACTCCCCTTTCCTCTT +
Preference number: 5 (lower is better)
Translates to: PKFLPYRPMPPLSTVTFSVNSPA*RLPFPL
Trigger: AAGAGGAAAGGGGAGTCTCAAAGCTGGAGAGTTTAC...ACTAAAAGTGACAGTTGAAAGTGGTGGCATAGGACGGTAGGGTAGAAATTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR CAA 90 bp TCTACCAGACAGAAACAAGGATGTATGAATTGCCAAGAGTTGGCAGCCATCTTGTCGAAGCCCAAATTGTaGCTTTCTGCAGGAAACGAG +
Preference number: 5 (lower is better)
Translates to: STRQKQGCMNCQELAAILSKPKL*LSAGNE
Trigger: CTCGTTTCCTGCAGAAAGCAACAATTTGGGCTTCGA...CAAGATGGCTGCCAACTCTTGGCAATTCATACATCCTTGTTTCTGTCTGGTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CAA 90 bp ACAAGGATGTATGAATTGCCAAGAGTTGGCAGCCATCTTGCCAACACAAGAGGACGCAGTGTGTTCTGTTaGGAAAGTAAGTTGTACCCT +
Preference number: 5 (lower is better)
Translates to: TRMYELPRVGSHLANTRGRSVFC*ESKLYP
Trigger: AGGGTACAACTTACTTTCCAAACAGAACACACTGCG...TCCTCTTGTGTTGGCAAGATGGCTGCCAACTCTTGGCAATTCATACATCCTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CAA 90 bp AGGAAAGCCTGCATGAGAGTGAGGCCAAGACCAGGGAAATGGATCCAACACTCTAGACGCAACTATACATaGTCTATAAGAAAGGCACAT +
Preference number: 5 (lower is better)
Translates to: RKACMRVRPRPGKWIQHSRRNYT*SIRKAH
Trigger: ATGTGCCTTTCTTATAGACAATGTATAGTTGCGTCT...AGAGTGTTGGATCCATTTCCCTGGTCTTGGCCTCACTCTCATGCAGGCTTTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CAA 90 bp TGTTTCTATACACTAACAGCGAACAATCCTGTCTTTCTGGTGAGCGTTTCCTTGCTGGTGAGCGTTTCCTaGTTGCTGACAATGTTGCTC +
Preference number: 5 (lower is better)
Translates to: CFYTLTANNPVFLVSVSLLVSVS*LLTMLL
Trigger: GAGCAACATTGTCAGCAACAAGGAAACGCTCACCAG...CAAGGAAACGCTCACCAGAAAGACAGGATTGTTCGCTGTTAGTGTATAGAAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578928.1
CDS-3UTR CAA 90 bp TTCCCTCCCAAATTTCTACCCTACCGTCCTATGCCACCACTTTCAACTGTCACTGTGTTAAGATGCCCATaGATGGATACACACATTCTA +
Preference number: 5 (lower is better)
Translates to: FPPKFLPYRPMPPLSTVTVLRCP*MDTHIL
Trigger: TAGAATGTGTGTATCCATCAATGGGCATCTTAACAC...AGTGACAGTTGAAAGTGGTGGCATAGGACGGTAGGGTAGAAATTTGGGAGGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CAA 90 bp CCCAAATTTCTACCCTACCGTCCTATGCCACCACTTTCAACTGTCACTTTTAGTACAAGGATGTATGAATaGCCAAGAGTTGGCAGCCAT +
Preference number: 5 (lower is better)
Translates to: PKFLPYRPMPPLSTVTFSTRMYE*PRVGSH
Trigger: ATGGCTGCCAACTCTTGGCAATTCATACATCCTTGT...ACTAAAAGTGACAGTTGAAAGTGGTGGCATAGGACGGTAGGGTAGAAATTTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR CAA 90 bp AATCAGAATCATAGGTGCAAAAGAGTAGAGGGGGAGAAACATACACTAGGGAGAGACGTCAGAGAATTTTaGGGAGGACTTCAGATGGCT +
Preference number: 5 (lower is better)
Translates to: NQNHRCKRVEGEKHTLGRDVREF*GGLQMA
Trigger: AGCCATCTGAAGTCCTCCCAAAAATTCTCTGACGTC...TCTCCCTAGTGTATGTTTCTCCCCCTCTACTCTTTTGCACCTATGATTCTGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CAA 90 bp TCTACCAGACAGAAACAAGGATGTATGAATTGCCAAGAGTTGGCAGCCATCTTGCTAAGGAAGTTGACGTaGGTAGAATTCCTGCTGCAT +
Preference number: 5 (lower is better)
Translates to: STRQKQGCMNCQELAAILLRKLT*VEFLLH
Trigger: ATGCAGCAGGAATTCTACCAACGTCAACTTCCTTAG...CAAGATGGCTGCCAACTCTTGGCAATTCATACATCCTTGTTTCTGTCTGGTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CAA 90 bp TCTGCCTTTAGTGTCATCATGTTAAGGCATGGAAGATGTTGCTGCCATGCTTATTCGAAGCCCAAATTGTaGCTTTCTGCAGGAAACGAG +
Preference number: 5 (lower is better)
Translates to: SAFSVIMLRHGRCCCHAYSKPKL*LSAGNE
Trigger: CTCGTTTCCTGCAGAAAGCAACAATTTGGGCTTCGA...ATAAGCATGGCAGCAACATCTTCCATGCCTTAACATGATGACACTAAAGGCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CAA 90 bp ACAAGGATGTATGAATTGCCAAGAGTTGGCAGCCATCTTGCCAACACAAGAGGAAACTATCGGCCATTATaGCAAAACTGCCAACTGAGA +
Preference number: 5 (lower is better)
Translates to: TRMYELPRVGSHLANTRGNYRPL*QNCQLR
Trigger: TCTCAGTTGGCAGTTTTGCAATAATGGCCGATAGTT...TCCTCTTGTGTTGGCAAGATGGCTGCCAACTCTTGGCAATTCATACATCCTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CAA 90 bp TTCCCTCCCAAATTTCTACCCTACCGTCCTATGCCACCACTTTCAACTGTCACTACGAGACTTGATCACTaGATCTGTCAGTATGTGATA +
Preference number: 5 (lower is better)
Translates to: FPPKFLPYRPMPPLSTVTTRLDH*ICQYVI
Trigger: TATCACATACTGACAGATCAAGTGATCAAGTCTCGT...AGTGACAGTTGAAAGTGGTGGCATAGGACGGTAGGGTAGAAATTTGGGAGGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CAA 90 bp TTCCCTCCCAAATTTCTACCCTACCGTCCTATGCCACCACTTTCAACTGTCACTGGAGAAAAACCTAGGTaGATCAATGAAAGATATGCC +
Preference number: 5 (lower is better)
Translates to: FPPKFLPYRPMPPLSTVTGEKPR*INERYA
Trigger: GGCATATCTTTCATTGATCAACCTAGGTTTTTCTCC...AGTGACAGTTGAAAGTGGTGGCATAGGACGGTAGGGTAGAAATTTGGGAGGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CAA 90 bp ATCCAACACTCTGGAAAGGGATTCAGAAGCCAGTTTATGCCCATACTTAATTCTATTGCTGGCATCTGTTaGTGGACTGGTGTGAGCAAG +
Preference number: 5 (lower is better)
Translates to: IQHSGKGFRSQFMPILNSIAGIC*WTGVSK
Trigger: CTTGCTCACACCAGTCCACAAACAGATGCCAGCAAT...AGAATTAAGTATGGGCATAAACTGGCTTCTGAATCCCTTTCCAGAGTGTTGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CAA 90 bp CCCAAATTTCTACCCTACCGTCCTATGCCACCACTTTCAACTGTCACTTTTAGTATCTCTGGAAACTGTTaGAAAGGCTGGTTCTTGAGA +
Preference number: 5 (lower is better)
Translates to: PKFLPYRPMPPLSTVTFSISGNC*KGWFLR
Trigger: TCTCAAGAACCAGCCTTTCAAACAGTTTCCAGAGAT...ACTAAAAGTGACAGTTGAAAGTGGTGGCATAGGACGGTAGGGTAGAAATTTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280200.8
CDS-3UTR CAA 90 bp AAGTATGGACAGAGATACCCCATTTCTAGAATCCATCCCATATTTCACTTTTTATGCTGGGTCCCGATCTaGAACCACTCCACCTGTGTT +
Preference number: 5 (lower is better)
Translates to: KYGQRYPISRIHPIFHFLCWVPI*NHSTCV
Trigger: AACACAGGTGGAGTGGTTCAAGATCGGGACCCAGCA...TAAAAAGTGAAATATGGGATGGATTCTAGAAATGGGGTATCTCTGTCCATACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CAA 90 bp CCCAAATTTCTACCCTACCGTCCTATGCCACCACTTTCAACTGTCACTTTTAGTTGTATCATCCATGGATaGATTGGTAGGTTGACTGGT +
Preference number: 5 (lower is better)
Translates to: PKFLPYRPMPPLSTVTFSCIIHG*IGRLTG
Trigger: ACCAGTCAACCTACCAATCAATCCATGGATGATACA...ACTAAAAGTGACAGTTGAAAGTGGTGGCATAGGACGGTAGGGTAGAAATTTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR CAA 90 bp CCCTACCGTCCTATGCCACCACTTTCAACTGTCACTTTTAGTGGTATATTATATATGAATTGCCAAGAGTaGGCAGCCATCTTGCCAACA +
Preference number: 5 (lower is better)
Translates to: PYRPMPPLSTVTFSGILYMNCQE*AAILPT
Trigger: TGTTGGCAAGATGGCTGCCAACTCTTGGCAATTCAT...ATATAATATACCACTAAAAGTGACAGTTGAAAGTGGTGGCATAGGACGGTAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR CAA 90 bp CCCTACCGTCCTATGCCACCACTTTCAACTGTCACTTTTAGTGGTATATTATATCTGAATTGCCCAGTATaGTGCTTTGACCCTGCTTCT +
Preference number: 5 (lower is better)
Translates to: PYRPMPPLSTVTFSGILYLNCPV*CFDPAS
Trigger: AGAAGCAGGGTCAAAGCACAATACTGGGCAATTCAG...ATATAATATACCACTAAAAGTGACAGTTGAAAGTGGTGGCATAGGACGGTAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR CAA 90 bp CCCAAATTTCTACCCTACCGTCCTATGCCACCACTTTCAACTGTCACTTTTAGTCACTGCAGTCAATATTaGTTGGTAAACTCTCCAGCT +
Preference number: 5 (lower is better)
Translates to: PKFLPYRPMPPLSTVTFSHCSQY*LVNSPA
Trigger: AGCTGGAGAGTTTACCAACAAATATTGACTGCAGTG...ACTAAAAGTGACAGTTGAAAGTGGTGGCATAGGACGGTAGGGTAGAAATTTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR CAA 90 bp TCTACCAGACAGAAACAAGGATGTATGAATTGCCAAGAGTTGGCAGCCATCTTGCACTGCAGTCAATATTaGTTGGTAAACTCTCCAGCT +
Preference number: 5 (lower is better)
Translates to: STRQKQGCMNCQELAAILHCSQY*LVNSPA
Trigger: AGCTGGAGAGTTTACCAACAAATATTGACTGCAGTG...CAAGATGGCTGCCAACTCTTGGCAATTCATACATCCTTGTTTCTGTCTGGTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR CAA 90 bp GCTGATAGAGTGGATTCTAGAAGTATGGACAGAGATACCCCATTTCTAGAATCCGACTATCTACTACATTaGCTCCTAAGGCTAGACCTG +
Preference number: 5 (lower is better)
Translates to: ADRVDSRSMDRDTPFLESDYLLH*LLRLDL
Trigger: CAGGTCTAGCCTTAGGAGCAAATGTAGTAGATAGTC...GGATTCTAGAAATGGGGTATCTCTGTCCATACTTCTAGAATCCACTCTATCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR CAA 90 bp CTACTACATTTGCTCCTAAGGCTAGACCTGGGATGGCGGCAAGAATTCTATACATTTTATGTGGTGAGTTaGGGGAGAGAAAGACATCTA +
Preference number: 5 (lower is better)
Translates to: LLHLLLRLDLGWRQEFYTFYVVS*GRERHL
Trigger: TAGATGTCTTTCTCTCCCCAAACTCACCACATAAAA...TGTATAGAATTCTTGCCGCCATCCCAGGTCTAGCCTTAGGAGCAAATGTAGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CAA 90 bp ACAAGGATGTATGAATTGCCAAGAGTTGGCAGCCATCTTGCCAACACAAGAGGATTTTATGTGGTGAGTTaGGGGAGAGAAAGACATCTA +
Preference number: 5 (lower is better)
Translates to: TRMYELPRVGSHLANTRGFYVVS*GRERHL
Trigger: TAGATGTCTTTCTCTCCCCAAACTCACCACATAAAA...TCCTCTTGTGTTGGCAAGATGGCTGCCAACTCTTGGCAATTCATACATCCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CAA 90 bp TCTGCCTTTAGTGTCATCATGTTAAGGCATGGAAGATGTTGCTGCCATGCTTATAGGGACATTTGTCAGTaGAAGTTCTTCAACGAGCCT +
Preference number: 5 (lower is better)
Translates to: SAFSVIMLRHGRCCCHAYRDICQ*KFFNEP
Trigger: AGGCTCGTTGAAGAACTTCAACTGACAAATGTCCCT...ATAAGCATGGCAGCAACATCTTCCATGCCTTAACATGATGACACTAAAGGCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CAA 90 bp CTACTACATTTGCTCCTAAGGCTAGACCTGGGATGGCGGCAAGAATTCTATACAATCACTGAGAGTATATaGGAGAGCTCAAAGTCTTAC +
Preference number: 5 (lower is better)
Translates to: LLHLLLRLDLGWRQEFYTITESI*ESSKSY
Trigger: GTAAGACTTTGAGCTCTCCAATATACTCTCAGTGAT...TGTATAGAATTCTTGCCGCCATCCCAGGTCTAGCCTTAGGAGCAAATGTAGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CAA 90 bp ACAAGGATGTATGAATTGCCAAGAGTTGGCAGCCATCTTGCCAACACAAGAGGAATAACGTCTGGGAACTaGCCAAAATTAGTGATAGAC +
Preference number: 5 (lower is better)
Translates to: TRMYELPRVGSHLANTRGITSGN*PKLVID
Trigger: GTCTATCACTAATTTTGGCAAGTTCCCAGACGTTAT...TCCTCTTGTGTTGGCAAGATGGCTGCCAACTCTTGGCAATTCATACATCCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CAA 90 bp ATCCAACACTCTGGAAAGGGATTCAGAAGCCAGTTTATGCCCATACTTAATTCTGGTAAGTTGGGTGAATaGCTGGCATCTGTTTGTGGA +
Preference number: 5 (lower is better)
Translates to: IQHSGKGFRSQFMPILNSGKLGE*LASVCG
Trigger: TCCACAAACAGATGCCAGCAATTCACCCAACTTACC...AGAATTAAGTATGGGCATAAACTGGCTTCTGAATCCCTTTCCAGAGTGTTGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CAA 90 bp GGAGCTCTGATGTCTCATAGAGTAGGTTTGGAAGTATTATCTCCTCTTCAATTTGTGAGCGTTTCCTTGTaGCTGACAATGTTGCTCCCT +
Preference number: 5 (lower is better)
Translates to: GALMSHRVGLEVLSPLQFVSVSL*LTMLLP
Trigger: AGGGAGCAACATTGTCAGCAACAAGGAAACGCTCAC...AAATTGAAGAGGAGATAATACTTCCAAACCTACTCTATGAGACATCAGAGCTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578928.1
CDS-3UTR CAA 90 bp GATTCAGAAGCCAGTTTATGCCCATACTTAATTCTAGACACAACATTTAAGCCCATGAATTGCCAAGAGTaGGCAGCCATCTTGCCAACA +
Preference number: 5 (lower is better)
Translates to: DSEASLCPYLILDTTFKPMNCQE*AAILPT
Trigger: TGTTGGCAAGATGGCTGCCAACTCTTGGCAATTCAT...GGGCTTAAATGTTGTGTCTAGAATTAAGTATGGGCATAAACTGGCTTCTGAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR CAA 90 bp TCTACCAGACAGAAACAAGGATGTATGAATTGCCAAGAGTTGGCAGCCATCTTGTGCAGTCAATATTTGTaGGTAAACTCTCCAGCTTTG +
Preference number: 5 (lower is better)
Translates to: STRQKQGCMNCQELAAILCSQYL*VNSPAL
Trigger: CAAAGCTGGAGAGTTTACCAACAAATATTGACTGCA...CAAGATGGCTGCCAACTCTTGGCAATTCATACATCCTTGTTTCTGTCTGGTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR CAA 90 bp GATTCAGAAGCCAGTTTATGCCCATACTTAATTCTAGACACAACATTTAAGCCCGATTCCTTTCTCCTGTaGCCTGTACCCTCCCAATTT +
Preference number: 5 (lower is better)
Translates to: DSEASLCPYLILDTTFKPDSFLL*PVPSQF
Trigger: AAATTGGGAGGGTACAGGCAACAGGAGAAAGGAATC...GGGCTTAAATGTTGTGTCTAGAATTAAGTATGGGCATAAACTGGCTTCTGAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR CAA 90 bp TCTACCAGACAGAAACAAGGATGTATGAATTGCCAAGAGTTGGCAGCCATCTTGCAATACTGCAGTGGTTaGCTACAAAAGTCTTTCATG +
Preference number: 5 (lower is better)
Translates to: STRQKQGCMNCQELAAILQYCSG*LQKSFM
Trigger: CATGAAAGACTTTTGTAGCAAACCACTGCAGTATTG...CAAGATGGCTGCCAACTCTTGGCAATTCATACATCCTTGTTTCTGTCTGGTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CAA 90 bp ATCCAACACTCTGGAAAGGGATTCAGAAGCCAGTTTATGCCCATACTTAATTCTAATGTTCTGGAGGCTTaGCAATACTGCAGTGGTTTG +
Preference number: 5 (lower is better)
Translates to: IQHSGKGFRSQFMPILNSNVLEA*QYCSGL
Trigger: CAAACCACTGCAGTATTGCAAAGCCTCCAGAACATT...AGAATTAAGTATGGGCATAAACTGGCTTCTGAATCCCTTTCCAGAGTGTTGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CAA 90 bp CTCAGAAAACTTAGTATCACTGAGAGTATATTGGAGAGCTCAAAGTCTTACTCACGTTTCCCACTGGAGTaGCCACATGTTGTGTTTTGC +
Preference number: 5 (lower is better)
Translates to: LRKLSITESILESSKSYSRFPLE*PHVVFC
Trigger: GCAAAACACAACATGTGGCAACTCCAGTGGGAAACG...TGAGTAAGACTTTGAGCTCTCCAATATACTCTCAGTGATACTAAGTTTTCTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CAA 90 bp AATCAGAATCATAGGTGCAAAAGAGTAGAGGGGGAGAAACATACACTAGGGAGATGTTTGGAAAGTAAGTaGTACCCTGACTGCCACTAT +
Preference number: 5 (lower is better)
Translates to: NQNHRCKRVEGEKHTLGRCLESK*YPDCHY
Trigger: ATAGTGGCAGTCAGGGTACAACTTACTTTCCAAACA...TCTCCCTAGTGTATGTTTCTCCCCCTCTACTCTTTTGCACCTATGATTCTGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CAA 90 bp CTACTACATTTGCTCCTAAGGCTAGACCTGGGATGGCGGCAAGAATTCTATACATTCCTTTTCAGGAATTaGGAGAACTTATGCTTGGTA +
Preference number: 5 (lower is better)
Translates to: LLHLLLRLDLGWRQEFYTFLFRN*ENLCLV
Trigger: TACCAAGCATAAGTTCTCCAAATTCCTGAAAAGGAA...TGTATAGAATTCTTGCCGCCATCCCAGGTCTAGCCTTAGGAGCAAATGTAGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CAA 90 bp TCTACCAGACAGAAACAAGGATGTATGAATTGCCAAGAGTTGGCAGCCATCTTGATCACTGAGAGTATATaGGAGAGCTCAAAGTCTTAC +
Preference number: 5 (lower is better)
Translates to: STRQKQGCMNCQELAAILITESI*ESSKSY
Trigger: GTAAGACTTTGAGCTCTCCAATATACTCTCAGTGAT...CAAGATGGCTGCCAACTCTTGGCAATTCATACATCCTTGTTTCTGTCTGGTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CAA 90 bp CTACTACATTTGCTCCTAAGGCTAGACCTGGGATGGCGGCAAGAATTCTATACAAGACGCAACTATACATaGTCTATAAGAAAGGCACAT +
Preference number: 5 (lower is better)
Translates to: LLHLLLRLDLGWRQEFYTRRNYT*SIRKAH
Trigger: ATGTGCCTTTCTTATAGACAATGTATAGTTGCGTCT...TGTATAGAATTCTTGCCGCCATCCCAGGTCTAGCCTTAGGAGCAAATGTAGTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CAA 90 bp TCTACCAGACAGAAACAAGGATGTATGAATTGCCAAGAGTTGGCAGCCATCTTGATAACGTCTGGGAACTaGCCAAAATTAGTGATAGAC +
Preference number: 5 (lower is better)
Translates to: STRQKQGCMNCQELAAILITSGN*PKLVID
Trigger: GTCTATCACTAATTTTGGCAAGTTCCCAGACGTTAT...CAAGATGGCTGCCAACTCTTGGCAATTCATACATCCTTGTTTCTGTCTGGTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CAA 90 bp TCTACCAGACAGAAACAAGGATGTATGAATTGCCAAGAGTTGGCAGCCATCTTGGAGATAAAGCAATCATaGGAACCAGATAGAGACATG +
Preference number: 5 (lower is better)
Translates to: STRQKQGCMNCQELAAILEIKQS*EPDRDM
Trigger: CATGTCTCTATCTGGTTCCAATGATTGCTTTATCTC...CAAGATGGCTGCCAACTCTTGGCAATTCATACATCCTTGTTTCTGTCTGGTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CAA 90 bp GATTCAGAAGCCAGTTTATGCCCATACTTAATTCTAGACACAACATTTAAGCCCTGCCTCAAAACTATCTaGAGATGTGAGTGCTGCTCG +
Preference number: 5 (lower is better)
Translates to: DSEASLCPYLILDTTFKPCLKTI*RCECCS
Trigger: CGAGCAGCACTCACATCTCAAGATAGTTTTGAGGCA...GGGCTTAAATGTTGTGTCTAGAATTAAGTATGGGCATAAACTGGCTTCTGAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581982.5
CDS-3UTR CAA 90 bp GCTGATAGAGTGGATTCTAGAAGTATGGACAGAGATACCCCATTTCTAGAATCCGTGTTAAGATGCCCATaGATGGATACACACATTCTA +
Preference number: 5 (lower is better)
Translates to: ADRVDSRSMDRDTPFLESVLRCP*MDTHIL
Trigger: TAGAATGTGTGTATCCATCAATGGGCATCTTAACAC...GGATTCTAGAAATGGGGTATCTCTGTCCATACTTCTAGAATCCACTCTATCAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CAA 90 bp CCCTACCGTCCTATGCCACCACTTTCAACTGTCACTTTTAGTGGTATATTATATCACAAAGAGGGTATATaGGTTATCGGTTTTACCCTC +
Preference number: 5 (lower is better)
Translates to: PYRPMPPLSTVTFSGILYHKEGI*VIGFTL
Trigger: GAGGGTAAAACCGATAACCAATATACCCTCTTTGTG...ATATAATATACCACTAAAAGTGACAGTTGAAAGTGGTGGCATAGGACGGTAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR CAA 90 bp ATCCAACACTCTGGAAAGGGATTCAGAAGCCAGTTTATGCCCATACTTAATTCTTGTATCATCCATGGATaGATTGGTAGGTTGACTGGT +
Preference number: 5 (lower is better)
Translates to: IQHSGKGFRSQFMPILNSCIIHG*IGRLTG
Trigger: ACCAGTCAACCTACCAATCAATCCATGGATGATACA...AGAATTAAGTATGGGCATAAACTGGCTTCTGAATCCCTTTCCAGAGTGTTGGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR CAA 90 bp AATCAGAATCATAGGTGCAAAAGAGTAGAGGGGGAGAAACATACACTAGGGAGAGAGAATAGTAAAGGATaGCCCTCTCGCATTTATCTT +
Preference number: 5 (lower is better)
Translates to: NQNHRCKRVEGEKHTLGRENSKG*PSRIYL
Trigger: AAGATAAATGCGAGAGGGCAATCCTTTACTATTCTC...TCTCCCTAGTGTATGTTTCTCCCCCTCTACTCTTTTGCACCTATGATTCTGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CAA 90 bp GCTGATAGAGTGGATTCTAGAAGTATGGACAGAGATACCCCATTTCTAGAATCCTCAAGGAGAAGCATTTaGGTCACAGTGATCTCTAAT +
Preference number: 5 (lower is better)
Translates to: ADRVDSRSMDRDTPFLESSRRSI*VTVISN
Trigger: ATTAGAGATCACTGTGACCAAAATGCTTCTCCTTGA...GGATTCTAGAAATGGGGTATCTCTGTCCATACTTCTAGAATCCACTCTATCAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CAA 90 bp ATCCAACACTCTGGAAAGGGATTCAGAAGCCAGTTTATGCCCATACTTAATTCTTGTTTGGAAAGTAAGTaGTACCCTGACTGCCACTAT +
Preference number: 5 (lower is better)
Translates to: IQHSGKGFRSQFMPILNSCLESK*YPDCHY
Trigger: ATAGTGGCAGTCAGGGTACAACTTACTTTCCAAACA...AGAATTAAGTATGGGCATAAACTGGCTTCTGAATCCCTTTCCAGAGTGTTGGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CAA 90 bp GATTCAGAAGCCAGTTTATGCCCATACTTAATTCTAGACACAACATTTAAGCCCAGGGACATTTGTCAGTaGAAGTTCTTCAACGAGCCT +
Preference number: 5 (lower is better)
Translates to: DSEASLCPYLILDTTFKPRDICQ*KFFNEP
Trigger: AGGCTCGTTGAAGAACTTCAACTGACAAATGTCCCT...GGGCTTAAATGTTGTGTCTAGAATTAAGTATGGGCATAAACTGGCTTCTGAATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CAA 90 bp CTCAGAAAACTTAGTATCACTGAGAGTATATTGGAGAGCTCAAAGTCTTACTCAAGGGCCTCCACTTATTaGACCACAGGTAGAAGATTG +
Preference number: 5 (lower is better)
Translates to: LRKLSITESILESSKSYSRASTY*TTGRRL
Trigger: CAATCTTCTACCTGTGGTCAAATAAGTGGAGGCCCT...TGAGTAAGACTTTGAGCTCTCCAATATACTCTCAGTGATACTAAGTTTTCTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CAA 90 bp AATCAGAATCATAGGTGCAAAAGAGTAGAGGGGGAGAAACATACACTAGGGAGAACGAGACTTGATCACTaGATCTGTCAGTATGTGATA +
Preference number: 5 (lower is better)
Translates to: NQNHRCKRVEGEKHTLGRTRLDH*ICQYVI
Trigger: TATCACATACTGACAGATCAAGTGATCAAGTCTCGT...TCTCCCTAGTGTATGTTTCTCCCCCTCTACTCTTTTGCACCTATGATTCTGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CAA 90 bp TCTGCCTTTAGTGTCATCATGTTAAGGCATGGAAGATGTTGCTGCCATGCTTATGGAGAAAAACCTAGGTaGATCAATGAAAGATATGCC +
Preference number: 5 (lower is better)
Translates to: SAFSVIMLRHGRCCCHAYGEKPR*INERYA
Trigger: GGCATATCTTTCATTGATCAACCTAGGTTTTTCTCC...ATAAGCATGGCAGCAACATCTTCCATGCCTTAACATGATGACACTAAAGGCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CAA 90 bp AGATCCATGCATGAGTACATAAGAGTCATTACTAATGCACTCATGTCAAGAATAGCAGTTGCTCACTATTaGTCTTGGGAACTTGGAGGT +
Preference number: 5 (lower is better)
Translates to: RSMHEYIRVITNALMSRIAVAHY*SWELGG
Trigger: ACCTCCAAGTTCCCAAGACAAATAGTGAGCAACTGC...TATTCTTGACATGAGTGCATTAGTAATGACTCTTATGTACTCATGCATGGATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280200.8
ENST00000577287.5
ENST00000581982.5
ENST00000582621.6
CDS-3UTR CAA 90 bp AGATCCATGCATGAGTACATAAGAGTCATTACTAATGCACTCATGTCAAGAATACTGAATTGCCCAGTATaGTGCTTTGACCCTGCTTCT +
Preference number: 5 (lower is better)
Translates to: RSMHEYIRVITNALMSRILNCPV*CFDPAS
Trigger: AGAAGCAGGGTCAAAGCACAATACTGGGCAATTCAG...TATTCTTGACATGAGTGCATTAGTAATGACTCTTATGTACTCATGCATGGATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR CAA 90 bp AGATCCATGCATGAGTACATAAGAGTCATTACTAATGCACTCATGTCAAGAATAGTAAACTCTCCAGCTTaGAGACTCCCCTTTCCTCTT +
Preference number: 5 (lower is better)
Translates to: RSMHEYIRVITNALMSRIVNSPA*RLPFPL
Trigger: AAGAGGAAAGGGGAGTCTCAAAGCTGGAGAGTTTAC...TATTCTTGACATGAGTGCATTAGTAATGACTCTTATGTACTCATGCATGGATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR CAA 90 bp CTCAGAAAACTTAGTATCACTGAGAGTATATTGGAGAGCTCAAAGTCTTACTCAGACTATCTACTACATTaGCTCCTAAGGCTAGACCTG +
Preference number: 5 (lower is better)
Translates to: LRKLSITESILESSKSYSDYLLH*LLRLDL
Trigger: CAGGTCTAGCCTTAGGAGCAAATGTAGTAGATAGTC...TGAGTAAGACTTTGAGCTCTCCAATATACTCTCAGTGATACTAAGTTTTCTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CAA 90 bp CCAAAGCTTAATCTCCCCTGGATCATTCTGTTATATGATACAGTAAGTTTTCTTGATTCCTTTCTCCTGTaGCCTGTACCCTCCCAATTT +
Preference number: 5 (lower is better)
Translates to: PKLNLPWIILLYDTVSFLDSFLL*PVPSQF
Trigger: AAATTGGGAGGGTACAGGCAACAGGAGAAAGGAATC...AAGAAAACTTACTGTATCATATAACAGAATGATCCAGGGGAGATTAAGCTTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR CAA 90 bp CTCAGAAAACTTAGTATCACTGAGAGTATATTGGAGAGCTCAAAGTCTTACTCACTAAGGAAGTTGACGTaGGTAGAATTCCTGCTGCAT +
Preference number: 5 (lower is better)
Translates to: LRKLSITESILESSKSYSLRKLT*VEFLLH
Trigger: ATGCAGCAGGAATTCTACCAACGTCAACTTCCTTAG...TGAGTAAGACTTTGAGCTCTCCAATATACTCTCAGTGATACTAAGTTTTCTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CAA 90 bp CCAAAGCTTAATCTCCCCTGGATCATTCTGTTATATGATACAGTAAGTTTTCTTTGGAGTTGCCACATGTaGTGTTTTGCAAGCCTACTC +
Preference number: 5 (lower is better)
Translates to: PKLNLPWIILLYDTVSFLWSCHM*CFASLL
Trigger: GAGTAGGCTTGCAAAACACAACATGTGGCAACTCCA...AAGAAAACTTACTGTATCATATAACAGAATGATCCAGGGGAGATTAAGCTTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CAA 90 bp CTCAGAAAACTTAGTATCACTGAGAGTATATTGGAGAGCTCAAAGTCTTACTCAGTATCGAAGCCCAAATaGTTGCTTTCTGCAGGAAAC +
Preference number: 5 (lower is better)
Translates to: LRKLSITESILESSKSYSVSKPK*LLSAGN
Trigger: GTTTCCTGCAGAAAGCAACAATTTGGGCTTCGATAC...TGAGTAAGACTTTGAGCTCTCCAATATACTCTCAGTGATACTAAGTTTTCTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CAA 90 bp AGATCCATGCATGAGTACATAAGAGTCATTACTAATGCACTCATGTCAAGAATAACCACAGGTAGAAGATaGGCTCTGCTTTCTTCCTGT +
Preference number: 5 (lower is better)
Translates to: RSMHEYIRVITNALMSRITTGRR*ALLSSC
Trigger: ACAGGAAGAAAGCAGAGCCAATCTTCTACCTGTGGT...TATTCTTGACATGAGTGCATTAGTAATGACTCTTATGTACTCATGCATGGATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CAA 90 bp GCTGATAGAGTGGATTCTAGAAGTATGGACAGAGATACCCCATTTCTAGAATCCTTCCTTTTCAGGAATTaGGAGAACTTATGCTTGGTA +
Preference number: 5 (lower is better)
Translates to: ADRVDSRSMDRDTPFLESFLFRN*ENLCLV
Trigger: TACCAAGCATAAGTTCTCCAAATTCCTGAAAAGGAA...GGATTCTAGAAATGGGGTATCTCTGTCCATACTTCTAGAATCCACTCTATCAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CAA 90 bp ATCCAACACTCTGGAAAGGGATTCAGAAGCCAGTTTATGCCCATACTTAATTCTGAGATAAAGCAATCATaGGAACCAGATAGAGACATG +
Preference number: 5 (lower is better)
Translates to: IQHSGKGFRSQFMPILNSEIKQS*EPDRDM
Trigger: CATGTCTCTATCTGGTTCCAATGATTGCTTTATCTC...AGAATTAAGTATGGGCATAAACTGGCTTCTGAATCCCTTTCCAGAGTGTTGGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CAA 90 bp AGATCCATGCATGAGTACATAAGAGTCATTACTAATGCACTCATGTCAAGAATAGGTAAGTTGGGTGAATaGCTGGCATCTGTTTGTGGA +
Preference number: 5 (lower is better)
Translates to: RSMHEYIRVITNALMSRIGKLGE*LASVCG
Trigger: TCCACAAACAGATGCCAGCAATTCACCCAACTTACC...TATTCTTGACATGAGTGCATTAGTAATGACTCTTATGTACTCATGCATGGATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CAA 90 bp GCTGATAGAGTGGATTCTAGAAGTATGGACAGAGATACCCCATTTCTAGAATCCTTATCTCCTTGTGGCTaGTGCTACAAATTTTCCTTA +
Preference number: 5 (lower is better)
Translates to: ADRVDSRSMDRDTPFLESLSPCG*CYKFSL
Trigger: TAAGGAAAATTTGTAGCACAAGCCACAAGGAGATAA...GGATTCTAGAAATGGGGTATCTCTGTCCATACTTCTAGAATCCACTCTATCAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CAA 90 bp CCCTACCGTCCTATGCCACCACTTTCAACTGTCACTTTTAGTGGTATATTATATTATTGGAAGCCATCGTaGAATTCAAAAAGTAAACCC +
Preference number: 5 (lower is better)
Translates to: PYRPMPPLSTVTFSGILYYWKPS*NSKSKP
Trigger: GGGTTTACTTTTTGAATTCAACGATGGCTTCCAATA...ATATAATATACCACTAAAAGTGACAGTTGAAAGTGGTGGCATAGGACGGTAGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CAA 90 bp ATCCAACACTCTGGAAAGGGATTCAGAAGCCAGTTTATGCCCATACTTAATTCTAAAAGAGTCATGTTATaGGAAGCCATCGTTGAATTC +
Preference number: 5 (lower is better)
Translates to: IQHSGKGFRSQFMPILNSKRVML*EAIVEF
Trigger: GAATTCAACGATGGCTTCCAATAACATGACTCTTTT...AGAATTAAGTATGGGCATAAACTGGCTTCTGAATCCCTTTCCAGAGTGTTGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CAA 90 bp CCAAAGCTTAATCTCCCCTGGATCATTCTGTTATATGATACAGTAAGTTTTCTTACAAGGATGTATGAATaGCCAAGAGTTGGCAGCCAT +
Preference number: 5 (lower is better)
Translates to: PKLNLPWIILLYDTVSFLTRMYE*PRVGSH
Trigger: ATGGCTGCCAACTCTTGGCAATTCATACATCCTTGT...AAGAAAACTTACTGTATCATATAACAGAATGATCCAGGGGAGATTAAGCTTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR CAA 90 bp CCCTACCGTCCTATGCCACCACTTTCAACTGTCACTTTTAGTGGTATATTATATTCACTCACAGAATCTTaGATTGATCTGATAGTAGAG +
Preference number: 5 (lower is better)
Translates to: PYRPMPPLSTVTFSGILYSLTES*IDLIVE
Trigger: CTCTACTATCAGATCAATCAAAGATTCTGTGAGTGA...ATATAATATACCACTAAAAGTGACAGTTGAAAGTGGTGGCATAGGACGGTAGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CAA 90 bp GATTCAGAAGCCAGTTTATGCCCATACTTAATTCTAGACACAACATTTAAGCCCTCAAGGAGAAGCATTTaGGTCACAGTGATCTCTAAT +
Preference number: 5 (lower is better)
Translates to: DSEASLCPYLILDTTFKPSRRSI*VTVISN
Trigger: ATTAGAGATCACTGTGACCAAAATGCTTCTCCTTGA...GGGCTTAAATGTTGTGTCTAGAATTAAGTATGGGCATAAACTGGCTTCTGAATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CAA 90 bp AGATCCATGCATGAGTACATAAGAGTCATTACTAATGCACTCATGTCAAGAATAGTCGAGGAGGGACATTaGTCAGTTGAAGTTCTTCAA +
Preference number: 5 (lower is better)
Translates to: RSMHEYIRVITNALMSRIVEEGH*SVEVLQ
Trigger: TTGAAGAACTTCAACTGACAAATGTCCCTCCTCGAC...TATTCTTGACATGAGTGCATTAGTAATGACTCTTATGTACTCATGCATGGATCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CAA 90 bp CTCAGAAAACTTAGTATCACTGAGAGTATATTGGAGAGCTCAAAGTCTTACTCACAATTATCAGTTGACTaGGAACCCCGAAGGAAGAAT +
Preference number: 5 (lower is better)
Translates to: LRKLSITESILESSKSYSQLSVD*EPRRKN
Trigger: ATTCTTCCTTCGGGGTTCCAAGTCAACTGATAATTG...TGAGTAAGACTTTGAGCTCTCCAATATACTCTCAGTGATACTAAGTTTTCTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CAA 90 bp CCCTACCGTCCTATGCCACCACTTTCAACTGTCACTTTTAGTGGTATATTATATTATAGTAACAGTGAATaGCAGAGGAAAGAGCTGAAA +
Preference number: 5 (lower is better)
Translates to: PYRPMPPLSTVTFSGILYYSNSE*QRKELK
Trigger: TTTCAGCTCTTTCCTCTGCAATTCACTGTTACTATA...ATATAATATACCACTAAAAGTGACAGTTGAAAGTGGTGGCATAGGACGGTAGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS CCA 90 bp TCAAGAATAAGCTTAAACTCTAGTCTTTGGTCTGCGAGAGAAGGTTaGATAGTTGACATAAATATCCTCTCTTGTATCATCCATGGATTG +
Preference number: 5 (lower is better)
Translates to: SRISLNSSLWSAREG*IVDINILSCIIHGL
Trigger: CAATCCATGGATGATACAAGAGAGGATATTTATGTCAACTATCCAACCTTCTCTCGCAGACCAAAGACTAGAGTTTAAGCTTATTCTTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280200.8
ENST00000577287.5
ENST00000581982.5
ENST00000582621.6
CDS-3UTR CAA 90 bp AGATCCATGCATGAGTACATAAGAGTCATTACTAATGCACTCATGTCAAGAATAATTTGTCTTGGGAACTaGGAGGTGAAATTTCTGCCA +
Preference number: 5 (lower is better)
Translates to: RSMHEYIRVITNALMSRIICLGN*EVKFLP
Trigger: TGGCAGAAATTTCACCTCCAAGTTCCCAAGACAAAT...TATTCTTGACATGAGTGCATTAGTAATGACTCTTATGTACTCATGCATGGATCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280200.8
ENST00000577287.5
ENST00000581982.5
ENST00000582621.6
CDS-3UTR CAA 90 bp AGATCCATGCATGAGTACATAAGAGTCATTACTAATGCACTCATGTCAAGAATACACAAAGAGGGTATATaGGTTATCGGTTTTACCCTC +
Preference number: 5 (lower is better)
Translates to: RSMHEYIRVITNALMSRIHKEGI*VIGFTL
Trigger: GAGGGTAAAACCGATAACCAATATACCCTCTTTGTG...TATTCTTGACATGAGTGCATTAGTAATGACTCTTATGTACTCATGCATGGATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280200.8
ENST00000577287.5
ENST00000581982.5
ENST00000582621.6
CDS-3UTR CAA 90 bp CCAAAGCTTAATCTCCCCTGGATCATTCTGTTATATGATACAGTAAGTTTTCTTCACAAAGAGGGTATATaGGTTATCGGTTTTACCCTC +
Preference number: 5 (lower is better)
Translates to: PKLNLPWIILLYDTVSFLHKEGI*VIGFTL
Trigger: GAGGGTAAAACCGATAACCAATATACCCTCTTTGTG...AAGAAAACTTACTGTATCATATAACAGAATGATCCAGGGGAGATTAAGCTTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR CAA 90 bp AGATCCATGCATGAGTACATAAGAGTCATTACTAATGCACTCATGTCAAGAATATGTATCATCCATGGATaGATTGGTAGGTTGACTGGT +
Preference number: 5 (lower is better)
Translates to: RSMHEYIRVITNALMSRICIIHG*IGRLTG
Trigger: ACCAGTCAACCTACCAATCAATCCATGGATGATACA...TATTCTTGACATGAGTGCATTAGTAATGACTCTTATGTACTCATGCATGGATCT
38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280200.8
ENST00000577287.5
ENST00000581982.5
ENST00000582621.6
CDS-3UTR CAA 90 bp AAGTATGGACAGAGATACCCCATTTCTAGAATCCATCCCATATTTCACTTTTTATGTATCATCCATGGATaGATTGGTAGGTTGACTGGT +
Preference number: 5 (lower is better)
Translates to: KYGQRYPISRIHPIFHFLCIIHG*IGRLTG
Trigger: ACCAGTCAACCTACCAATCAATCCATGGATGATACA...TAAAAAGTGAAATATGGGATGGATTCTAGAAATGGGGTATCTCTGTCCATACTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR CAA 90 bp CTCAGAAAACTTAGTATCACTGAGAGTATATTGGAGAGCTCAAAGTCTTACTCATGCAGTCAATATTTGTaGGTAAACTCTCCAGCTTTG +
Preference number: 5 (lower is better)
Translates to: LRKLSITESILESSKSYSCSQYL*VNSPAL
Trigger: CAAAGCTGGAGAGTTTACCAACAAATATTGACTGCA...TGAGTAAGACTTTGAGCTCTCCAATATACTCTCAGTGATACTAAGTTTTCTGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CAA 90 bp AGATCCATGCATGAGTACATAAGAGTCATTACTAATGCACTCATGTCAAGAATACACTGCAGTCAATATTaGTTGGTAAACTCTCCAGCT +
Preference number: 5 (lower is better)
Translates to: RSMHEYIRVITNALMSRIHCSQY*LVNSPA
Trigger: AGCTGGAGAGTTTACCAACAAATATTGACTGCAGTG...TATTCTTGACATGAGTGCATTAGTAATGACTCTTATGTACTCATGCATGGATCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR CAA 90 bp CTCAGAAAACTTAGTATCACTGAGAGTATATTGGAGAGCTCAAAGTCTTACTCACAATACTGCAGTGGTTaGCTACAAAAGTCTTTCATG +
Preference number: 5 (lower is better)
Translates to: LRKLSITESILESSKSYSQYCSG*LQKSFM
Trigger: CATGAAAGACTTTTGTAGCAAACCACTGCAGTATTG...TGAGTAAGACTTTGAGCTCTCCAATATACTCTCAGTGATACTAAGTTTTCTGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CAA 90 bp CCAAAGCTTAATCTCCCCTGGATCATTCTGTTATATGATACAGTAAGTTTTCTTAACTATCGGCCATTATaGCAAAACTGCCAACTGAGA +
Preference number: 5 (lower is better)
Translates to: PKLNLPWIILLYDTVSFLNYRPL*QNCQLR
Trigger: TCTCAGTTGGCAGTTTTGCAATAATGGCCGATAGTT...AAGAAAACTTACTGTATCATATAACAGAATGATCCAGGGGAGATTAAGCTTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CAA 90 bp CCAAAGCTTAATCTCCCCTGGATCATTCTGTTATATGATACAGTAAGTTTTCTTTCCAATCGCATAGACTaGACATGTTATCTCCTTGTG +
Preference number: 5 (lower is better)
Translates to: PKLNLPWIILLYDTVSFLSNRID*TCYLLV
Trigger: CACAAGGAGATAACATGTCAAGTCTATGCGATTGGA...AAGAAAACTTACTGTATCATATAACAGAATGATCCAGGGGAGATTAAGCTTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS CCA 90 bp ATTACTAATGCACTCATGTCAAGAATAAGCTTAAACTCTAGTCTTTaGTCTGCGAGAGAAGGTTGGATAGTTGACATAAATATCCTCTCT +
Preference number: 5 (lower is better)
Translates to: ITNALMSRISLNSSL*SAREGWIVDINILS
Trigger: AGAGAGGATATTTATGTCAACTATCCAACCTTCTCTCGCAGACCAAAGACTAGAGTTTAAGCTTATTCTTGACATGAGTGCATTAGTAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280200.8
ENST00000577287.5
ENST00000581982.5
ENST00000582621.6
CDS-3UTR CAA 90 bp CTCAGAAAACTTAGTATCACTGAGAGTATATTGGAGAGCTCAAAGTCTTACTCATATTGGAAGCCATCGTaGAATTCAAAAAGTAAACCC +
Preference number: 5 (lower is better)
Translates to: LRKLSITESILESSKSYSYWKPS*NSKSKP
Trigger: GGGTTTACTTTTTGAATTCAACGATGGCTTCCAATA...TGAGTAAGACTTTGAGCTCTCCAATATACTCTCAGTGATACTAAGTTTTCTGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CAA 90 bp AGATCCATGCATGAGTACATAAGAGTCATTACTAATGCACTCATGTCAAGAATAGAGAATAGTAAAGGATaGCCCTCTCGCATTTATCTT +
Preference number: 5 (lower is better)
Translates to: RSMHEYIRVITNALMSRIENSKG*PSRIYL
Trigger: AAGATAAATGCGAGAGGGCAATCCTTTACTATTCTC...TATTCTTGACATGAGTGCATTAGTAATGACTCTTATGTACTCATGCATGGATCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR CAA 90 bp CCAAAGCTTAATCTCCCCTGGATCATTCTGTTATATGATACAGTAAGTTTTCTTGAGAATAGTAAAGGATaGCCCTCTCGCATTTATCTT +
Preference number: 5 (lower is better)
Translates to: PKLNLPWIILLYDTVSFLENSKG*PSRIYL
Trigger: AAGATAAATGCGAGAGGGCAATCCTTTACTATTCTC...AAGAAAACTTACTGTATCATATAACAGAATGATCCAGGGGAGATTAAGCTTTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000581982.5
ENST00000582621.6
CDS-3UTR CAA 90 bp AGATCCATGCATGAGTACATAAGAGTCATTACTAATGCACTCATGTCAAGAATAGAGAGTTTACCCTTCTaGCATATACTTAAGCACAAC +
Preference number: 5 (lower is better)
Translates to: RSMHEYIRVITNALMSRIESLPF*HILKHN
Trigger: GTTGTGCTTAAGTATATGCAAGAAGGGTAAACTCTC...TATTCTTGACATGAGTGCATTAGTAATGACTCTTATGTACTCATGCATGGATCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CAA 90 bp CTCAGAAAACTTAGTATCACTGAGAGTATATTGGAGAGCTCAAAGTCTTACTCATATAGTAACAGTGAATaGCAGAGGAAAGAGCTGAAA +
Preference number: 5 (lower is better)
Translates to: LRKLSITESILESSKSYSYSNSE*QRKELK
Trigger: TTTCAGCTCTTTCCTCTGCAATTCACTGTTACTATA...TGAGTAAGACTTTGAGCTCTCCAATATACTCTCAGTGATACTAAGTTTTCTGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CAA 90 bp AGATCCATGCATGAGTACATAAGAGTCATTACTAATGCACTCATGTCAAGAATACTCTATCCTGAAAGGTaGAGCTGTTTTCAATTGGTT +
Preference number: 5 (lower is better)
Translates to: RSMHEYIRVITNALMSRILYPER*SCFQLV
Trigger: AACCAATTGAAAACAGCTCAACCTTTCAGGATAGAG...TATTCTTGACATGAGTGCATTAGTAATGACTCTTATGTACTCATGCATGGATCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577287.5
CDS-3UTR CAA 90 bp AAGTATGGACAGAGATACCCCATTTCTAGAATCCATCCCATATTTCACTTTTTATCACTCACAGAATCTTaGATTGATCTGATAGTAGAG +
Preference number: 5 (lower is better)
Translates to: KYGQRYPISRIHPIFHFLSLTES*IDLIVE
Trigger: CTCTACTATCAGATCAATCAAAGATTCTGTGAGTGA...TAAAAAGTGAAATATGGGATGGATTCTAGAAATGGGGTATCTCTGTCCATACTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CAA 90 bp AGATCCATGCATGAGTACATAAGAGTCATTACTAATGCACTCATGTCAAGAATAAACTTAAGAAGCATTTaGCTTCCAAAGCAGCAACTT +
Preference number: 5 (lower is better)
Translates to: RSMHEYIRVITNALMSRINLRSI*LPKQQL
Trigger: AAGTTGCTGCTTTGGAAGCAAAATGCTTCTTAAGTT...TATTCTTGACATGAGTGCATTAGTAATGACTCTTATGTACTCATGCATGGATCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CAA 90 bp AGATCCATGCATGAGTACATAAGAGTCATTACTAATGCACTCATGTCAAGAATAACAAACCAATATAACTaGGATGTTCACAATCCACGA +
Preference number: 5 (lower is better)
Translates to: RSMHEYIRVITNALMSRITNQYN*DVHNPR
Trigger: TCGTGGATTGTGAACATCCAAGTTATATTGGTTTGT...TATTCTTGACATGAGTGCATTAGTAATGACTCTTATGTACTCATGCATGGATCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CAA 90 bp AAGTATGGACAGAGATACCCCATTTCTAGAATCCATCCCATATTTCACTTTTTATTATCTCCTTGTGGCTaGTGCTACAAATTTTCCTTA +
Preference number: 5 (lower is better)
Translates to: KYGQRYPISRIHPIFHFLLSPCG*CYKFSL
Trigger: TAAGGAAAATTTGTAGCACAAGCCACAAGGAGATAA...TAAAAAGTGAAATATGGGATGGATTCTAGAAATGGGGTATCTCTGTCCATACTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CAA 90 bp AAGTATGGACAGAGATACCCCATTTCTAGAATCCATCCCATATTTCACTTTTTAATAGACATAGAACCCTaGACAATGCTTTACTTCTGT +
Preference number: 5 (lower is better)
Translates to: KYGQRYPISRIHPIFHFLIDIEP*TMLYFC
Trigger: ACAGAAGTAAAGCATTGTCAAGGGTTCTATGTCTAT...TAAAAAGTGAAATATGGGATGGATTCTAGAAATGGGGTATCTCTGTCCATACTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS-3UTR CAA 90 bp AGATCCATGCATGAGTACATAAGAGTCATTACTAATGCACTCATGTCAAGAATAATAGACATAGAACCCTaGACAATGCTTTACTTCTGT +
Preference number: 5 (lower is better)
Translates to: RSMHEYIRVITNALMSRIIDIEP*TMLYFC
Trigger: ACAGAAGTAAAGCATTGTCAAGGGTTCTATGTCTAT...TATTCTTGACATGAGTGCATTAGTAATGACTCTTATGTACTCATGCATGGATCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280200.8
ENST00000582621.6
CDS TCA 72 bp GCTGGCCTGCAAGTAGCAGCGGTAAAGCCCCGAGTCTaGGACTGTGACATCGGGGATGACGATGACGCTCCA +
Preference number: 6 (lower is better)
Translates to: AGLQVAAVKPRV*DCDIGDDDDAP
Trigger: TGGAGCGTCATCGTCATCCCCGATGTCACAGTCTCAGACTCGGGGCTTTACCGCTGCTACTTGCAGGCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000280200.8
ENST00000577287.5
ENST00000579496.5
ENST00000581982.5
ENST00000582621.6
CDS GCA 72 bp GTCGATCTGACGGGGCTGGATCTTTTCCCACCTCACTaGCTGCACAGGCCACGTCATCTGAGGCTGACAAGT +
Preference number: 6 (lower is better)
Translates to: VDLTGLDLFPPH*LHRPRHLRLTS
Trigger: ACTTGTCAGCCTCAGATGACGTGGCCTGTGCAGGCAGTGAGGTGGGAAAAGATCCAGCCCCGTCAGATCGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000280200.8
ENST00000577287.5
ENST00000579496.5
ENST00000581982.5
ENST00000582621.6
CDS CAA 72 bp TCCTGTTTATCGTGGCCTCCTAGCCTCAACACCCTCTaGGTCACTGCAAGCTCCCCGCTGCTCCCTCCCTTA +
Preference number: 6 (lower is better)
Translates to: SCLSWPPSLNTL*VTASSPLLPPL
Trigger: TAAGGGAGGGAGCAGCGGGGAGCTTGCAGTGACCAAGAGGGTGTTGAGGCTAGGAGGCCACGATAAACAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000580335.1
ENST00000581982.5
CDS TCA 72 bp GGCCATCCATCTGAGCTACGTGAGGAGGATTCCATGTaGACGCCGATCAGCTTCCATTTAACCCTCGGCTAC +
Preference number: 6 (lower is better)
Translates to: GHPSELREEDSM*TPISFHLTLGY
Trigger: GTAGCCGAGGGTTAAATGGAAGCTGATCGGCGTTCACATGGAATCCTCCTCACGTAGCTCAGATGGATGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578928.1
CDS CCA 72 bp GTGACATCGGGGATGACGATGACGCTCCACCTTCCGTaGCTGCAGTTGCTCACTATTTGTCTTGGGAACTTG +
Preference number: 6 (lower is better)
Translates to: VTSGMTMTLHLP*LQLLTICLGNL
Trigger: CAAGTTCCCAAGACAAATAGTGAGCAACTGCAGCCACGGAAGGTGGAGCGTCATCGTCATCCCCGATGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000280200.8
ENST00000577287.5
ENST00000579496.5
ENST00000581982.5
ENST00000582621.6
CDS CCA 72 bp TCAATCTCATCACGAAGGTTTCGTTTTCTCCTGCGCTaGCCTGCAAGTAGCAGCGGTAAAGCCCCGAGTCTG +
Preference number: 6 (lower is better)
Translates to: SISSRRFRFLLR*PASSSGKAPSL
Trigger: CAGACTCGGGGCTTTACCGCTGCTACTTGCAGGCCAGCGCAGGAGAAAACGAAACCTTCGTGATGAGATTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000280200.8
ENST00000577287.5
ENST00000578928.1
ENST00000579496.5
ENST00000581982.5
ENST00000582621.6
CDS CAA 90 bp TTTATCGTATCCTGTTTATCGTGGCCTCCTAGCCTCAACACCCTCTaGGTCACTGCAAGCTCCCCGCTGCTCCCTCCCTTAATTAGCACT +
Preference number: 6 (lower is better)
Translates to: FIVSCLSWPPSLNTL*VTASSPLLPPLIST
Trigger: AGTGCTAATTAAGGGAGGGAGCAGCGGGGAGCTTGCAGTGACCAAGAGGGTGTTGAGGCTAGGAGGCCACGATAAACAGGATACGATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000580335.1
ENST00000581982.5
CDS CAA 90 bp GATGACGATGACGCTCCACCTTCCGTGGCTGCAGTTGCTCACTATTaGTCTTGGGAACTTGGAGGTGAAATTTCTGCCATGGACCAAGTT +
Preference number: 6 (lower is better)
Translates to: DDDDAPPSVAAVAHY*SWELGGEISAMDQV
Trigger: AACTTGGTCCATGGCAGAAATTTCACCTCCAAGTTCCCAAGACAAATAGTGAGCAACTGCAGCCACGGAAGGTGGAGCGTCATCGTCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000280200.8
ENST00000577287.5
ENST00000579496.5
ENST00000581982.5
ENST00000582621.6
CDS CCA 72 bp CTGAACCACCTGTATCACCTTCTGCCAAGTTCCCTGTaGGTAAGTGTAAAGAGAGCAGGAATAGTAGCCAAC +
Preference number: 6 (lower is better)
Translates to: LNHLYHLLPSSL*VSVKRAGIVAN
Trigger: GTTGGCTACTATTCCTGCTCTCTTTACACTTACCCACAGGGAACTTGGCAGAAGGTGATACAGGTGGTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000280200.8
ENST00000579496.5
ENST00000580335.1
ENST00000582621.6
ENST00000583955.5
CDS CAA 72 bp CTGAAAATGGCTATGGAATCCTGCTGGGTCCCGATCTaGAACCACTCCACCTGTGTTAAGATGCCCATTGAT +
Preference number: 6 (lower is better)
Translates to: LKMAMESCWVPI*NHSTCVKMPID
Trigger: ATCAATGGGCATCTTAACACAGGTGGAGTGGTTCAAGATCGGGACCCAGCAGGATTCCATAGCCATTTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000280200.8
ENST00000579496.5
ENST00000580335.1
ENST00000582621.6
ENST00000583955.5
CDS TCA 72 bp AAGACAGGTTTGCTCCTTTATGAGGATGGGCAGATTTaGGTTTCTTCTCTCTCGGGGAACCAGTCGGCTTAT +
Preference number: 6 (lower is better)
Translates to: KTGLLLYEDGQI*VSSLSGNQSAY
Trigger: ATAAGCCGACTGGTTCCCCGAGAGAGAAGAAACTCAAATCTGCCCATCCTCATAAAGGAGCAAACCTGTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582621.6
CDS CCA 72 bp TCTTGGTTAAGGACTTTTATCGTATCCTGTTTATCGTaGCCTCCTAGCCTCAACACCCTCTTGGTCACTGCA +
Preference number: 6 (lower is better)
Translates to: SWLRTFIVSCLS*PPSLNTLLVTA
Trigger: TGCAGTGACCAAGAGGGTGTTGAGGCTAGGAGGCCACGATAAACAGGATACGATAAAAGTCCTTAACCAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000580335.1
ENST00000581982.5
CDS CAA 72 bp GTGCTGCTCGCTCTAACGCTTCTTCCCATCTGCGTCTaGGTTAAGGACTTTTATCGTATCCTGTTTATCGTG +
Preference number: 6 (lower is better)
Translates to: VLLALTLLPICV*VKDFYRILFIV
Trigger: CACGATAAACAGGATACGATAAAAGTCCTTAACCAAGACGCAGATGGGAAGAAGCGTTAGAGCGAGCAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280200.8
ENST00000580335.1
ENST00000581982.5
CDS TCA 72 bp AAAGGCCTTAGCTTAAAAGACAGGTTTGCTCCTTTATaGGGATGGGCAGATTTGAGTTTCTTCTCTCTCGGG +
Preference number: 6 (lower is better)
Translates to: KGLSLKDRFAPL*GWADLSFFSLG
Trigger: CCCGAGAGAGAAGAAACTCAAATCTGCCCATCCTCATAAAGGAGCAAACCTGTCTTTTAAGCTAAGGCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582621.6
CDS GCA 72 bp TCTAGAGACATGTTCTCGGCAAAGGGAACTGATGTATaGCAAAGCACCTCTTCACATAGAGCTCTGTATACA +
Preference number: 6 (lower is better)
Translates to: SRDMFSAKGTDV*QSTSSHRALYT
Trigger: TGTATACAGAGCTCTATGTGAAGAGGTGCTTTGGCATACATCAGTTCCCTTTGCCGAGAACATGTCTCTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000280200.8
ENST00000579496.5
ENST00000580335.1
ENST00000582621.6
ENST00000583955.5
CDS CCA 72 bp AATAAAACTGTCCCTCCAGCCACAAAGAGGGTATATTaGTTATCGGTTTTACCCTCGGCTACAGTCAATCTC +
Preference number: 6 (lower is better)
Translates to: NKTVPPATKRVY*LSVLPSATVNL
Trigger: GAGATTGACTGTAGCCGAGGGTAAAACCGATAACCAATATACCCTCTTTGTGGCTGGAGGGACAGTTTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000280200.8
ENST00000577287.5
ENST00000579496.5
ENST00000581982.5
ENST00000582621.6
CDS CAA 72 bp TCTCTACAGGTTAGCTCCATCCTCTATCCTGAAAGGTaGAGCTGTTTTCAATTGGTTGTCCTGACTGAACCA +
Preference number: 6 (lower is better)
Translates to: SLQVSSILYPER*SCFQLVVLTEP
Trigger: TGGTTCAGTCAGGACAACCAATTGAAAACAGCTCAACCTTTCAGGATAGAGGATGGAGCTAACCTGTAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577287.5
CDS GCA 72 bp GCTTTTTATAATGTGACATGCAGATCCCCAGCACAATaGAGTTTCCTTCCTCTCAGATGTTATCAGTCGTGT +
Preference number: 6 (lower is better)
Translates to: AFYNVTCRSPAQ*SFLPLRCYQSC
Trigger: ACACGACTGATAACATCTGAGAGGAAGGAAACTGCATTGTGCTGGGGATCTGCATGTCACATTATAAAAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000579496.5
ENST00000580335.1
ENST00000582621.6
ENST00000583955.5
CDS CAA 90 bp TCATTTAGTTCTCTACAGGTTAGCTCCATCCTCTATCCTGAAAGGTaGAGCTGTTTTCAATTGGTTGTCCTGACTGAACCACCTGTATCA +
Preference number: 6 (lower is better)
Translates to: SFSSLQVSSILYPER*SCFQLVVLTEPPVS
Trigger: TGATACAGGTGGTTCAGTCAGGACAACCAATTGAAAACAGCTCAACCTTTCAGGATAGAGGATGGAGCTAACCTGTAGAGAACTAAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577287.5
CDS CAA 90 bp GACATAAATATCCTCTCTTGTATCATCCATGGATTGATTGGTAGGTaGACTGGTAGAGATGGGACTTCTATAGTTATTGGGTGCCTTCTG +
Preference number: 6 (lower is better)
Translates to: DINILSCIIHGLIGR*TGRDGTSIVIGCLL
Trigger: CAGAAGGCACCCAATAACTATAGAAGTCCCATCTCTACCAGTCAACCTACCAATCAATCCATGGATGATACAAGAGAGGATATTTATGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280200.8
ENST00000577287.5
ENST00000581982.5
ENST00000582621.6
CDS GCA 72 bp GTCAAGTTTACCTGCTTCTGGAAGCAACTTTACTATTaGAGCTACTCAGACTCATTCCAAACTCAGATAAAG +
Preference number: 6 (lower is better)
Translates to: VKFTCFWKQLYY*SYSDSFQTQIK
Trigger: CTTTATCTGAGTTTGGAATGAGTCTGAGTAGCTGCAATAGTAAAGTTGCTTCCAGAAGCAGGTAAACTTGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580335.1
CDS CCA 72 bp AGCTTAAACTCTAGTCTTTGGTCTGCGAGAGAAGGTTaGATAGTTGACATAAATATCCTCTCTTGTATCATC +
Preference number: 6 (lower is better)
Translates to: SLNSSLWSAREG*IVDINILSCII
Trigger: GATGATACAAGAGAGGATATTTATGTCAACTATCCAACCTTCTCTCGCAGACCAAAGACTAGAGTTTAAGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280200.8
ENST00000577287.5
ENST00000581982.5
ENST00000582621.6
CDS CAA 72 bp AGTCAAGTTTACCTGCTTCTGGAAGCAACTTTACTATaGCAGCTACTCAGACTCATTCCAAACTCAGATAAA +
Preference number: 6 (lower is better)
Translates to: SQVYLLLEATLL*QLLRLIPNSDK
Trigger: TTTATCTGAGTTTGGAATGAGTCTGAGTAGCTGCAATAGTAAAGTTGCTTCCAGAAGCAGGTAAACTTGACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580335.1