Pregenerated sensors for CCT5 (Homo sapiens)
Ensembl gene IDs: ENSG00000150753Ensembl transcript IDs: ENST00000280326.9, ENST00000506600.1, ENST00000508451.1, ENST00000509846.1, ENST00000511995.1, ENST00000515676.5
Found 62 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCTGCACATGCTGGTCCTGATTCTGTGTATGAGCTGTGTTCAGGGTaGGGCCGGGGCCAGAGGAAAGCAAAGGCTCACATGGGTCTCCAT | + |
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Preference number: 1 (lower is better) Translates to: SAHAGPDSVYELCSG*GRGQRKAKAHMGLH Trigger: ATGGAGACCCATGTGAGCCTTTGCTTTCCTCTGGCCCCGGCCCCACCCTGAACACAGCTCATACACAGAATCAGGACCAGCATGTGCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000280326.9 |
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| 3UTR TCA 90 bp | ACCTCCACTTCACTGTGTCCCTCTGATAGGGAAACAAGTGGGTTCTaGACTGCCCTAAGCCTGTGCTGGTGGCCAGCTCTGCACATGCTG | + |
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Preference number: 1 (lower is better) Translates to: TSTSLCPSDRETSGF*TALSLCWWPALHML Trigger: CAGCATGTGCAGAGCTGGCCACCAGCACAGGCTTAGGGCAGTTCAGAACCCACTTGTTTCCCTATCAGAGGGACACAGTGAAGTGGAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000280326.9 |
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| 3UTR-3UTR CCA 90 bp | GGATTGACCTGGCCCTACTACTTGCTGGTGGTGAGATGCTGGCCAATTATGAGTAAGCAAAGGCTCACATaGGTCTCCATCAGCCCTAAA | + |
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Preference number: 2 (lower is better) Translates to: GLTWPYYLLVVRCWPIMSKQRLT*VSISPK Trigger: TTTAGGGCTGATGGAGACCCATGTGAGCCTTTGCTT...ACTCATAATTGGCCAGCATCTCACCACCAGCAAGTAGTAGGGCCAGGTCAATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000280326.9 |
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| 3UTR-3UTR CCA 90 bp | CATGAATGTAGAGAAAACACAATGACCCAAAAGTTAAGACTGGTGAATCTCCAGGCCCTAAGCCTGTGCTaGTGGCCAGCTCTGCACATG | + |
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Preference number: 2 (lower is better) Translates to: HECRENTMTQKLRLVNLQALSLC*WPALHM Trigger: CATGTGCAGAGCTGGCCACCAGCACAGGCTTAGGGC...CTGGAGATTCACCAGTCTTAACTTTTGGGTCATTGTGTTTTCTCTACATTCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000280326.9 |
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| 3UTR-3UTR GCA 90 bp | GTCACTCTATCTGAACATGGTAACTGCAAGATTTCTCCCTTATTTCCTGTAATTACTGCCCTAAGCCTGTaGTGGTGGCCAGCTCTGCAC | + |
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Preference number: 2 (lower is better) Translates to: VTLSEHGNCKISPLFPVITALSL*WWPALH Trigger: GTGCAGAGCTGGCCACCAGCACAGGCTTAGGGCAGT...AATTACAGGAAATAAGGGAGAAATCTTGCAGTTACCATGTTCAGATAGAGTGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000280326.9 |
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| 3UTR-3UTR TCA 90 bp | GGATTGACCTGGCCCTACTACTTGCTGGTGGTGAGATGCTGGCCAATTATGAGTATATTCCTCTCAATATaGAAGTGCATCTTGAGAGCT | + |
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Preference number: 2 (lower is better) Translates to: GLTWPYYLLVVRCWPIMSIFLSI*KCILRA Trigger: AGCTCTCAAGATGCACTTTCATATTGAGAGGAATAT...ACTCATAATTGGCCAGCATCTCACCACCAGCAAGTAGTAGGGCCAGGTCAATCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000280326.9 |
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| 3UTR-3UTR CCA 90 bp | GTCACTCTATCTGAACATGGTAACTGCAAGATTTCTCCCTTATTTCCTGTAATTCTAAGCCTGTGCTGGTaGCCAGCTCTGCACATGCTG | + |
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Preference number: 2 (lower is better) Translates to: VTLSEHGNCKISPLFPVILSLCW*PALHML Trigger: CAGCATGTGCAGAGCTGGCCACCAGCACAGGCTTAG...AATTACAGGAAATAAGGGAGAAATCTTGCAGTTACCATGTTCAGATAGAGTGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000280326.9 |
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| 3UTR-3UTR TCA 90 bp | CATGAATGTAGAGAAAACACAATGACCCAAAAGTTAAGACTGGTGAATCTCCAGGAAACAAGTGGGTTCTaGACTGCCCTAAGCCTGTGC | + |
|
Preference number: 2 (lower is better) Translates to: HECRENTMTQKLRLVNLQETSGF*TALSLC Trigger: GCACAGGCTTAGGGCAGTTCAGAACCCACTTGTTTC...CTGGAGATTCACCAGTCTTAACTTTTGGGTCATTGTGTTTTCTCTACATTCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000280326.9 |
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| 3UTR-3UTR GCA 90 bp | GTGAGGTTCAATTTTGGAAAGGGGGATTGGTTTAGTGGCTCTTCTGATACAACCTTGCTGGTGGTGAGATaGTGGCCAATTATGAGTACT | + |
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Preference number: 2 (lower is better) Translates to: VRFNFGKGDWFSGSSDTTLLVVR*WPIMST Trigger: AGTACTCATAATTGGCCAGCATCTCACCACCAGCAA...GGTTGTATCAGAAGAGCCACTAAACCAATCCCCCTTTCCAAAATTGAACCTCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000280326.9 |
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| 3UTR-3UTR CCA 90 bp | GTGAGGTTCAATTTTGGAAAGGGGGATTGGTTTAGTGGCTCTTCTGATACAACCCCCTCTACAATCAAATaGCCCACCCATTTAGATAGG | + |
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Preference number: 2 (lower is better) Translates to: VRFNFGKGDWFSGSSDTTPSTIK*PTHLDR Trigger: CCTATCTAAATGGGTGGGCCATTTGATTGTAGAGGG...GGTTGTATCAGAAGAGCCACTAAACCAATCCCCCTTTCCAAAATTGAACCTCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000280326.9 |
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| 3UTR-3UTR TCA 90 bp | GTGAGGTTCAATTTTGGAAAGGGGGATTGGTTTAGTGGCTCTTCTGATACAACCTATGAAAGTGCATCTTaGGAGCTCCTGTTTAAGCTG | + |
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Preference number: 2 (lower is better) Translates to: VRFNFGKGDWFSGSSDTTYESAS*ELLFKL Trigger: CAGCTTAAACAGGAGCTCTCAAGATGCACTTTCATA...GGTTGTATCAGAAGAGCCACTAAACCAATCCCCCTTTCCAAAATTGAACCTCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000280326.9 |
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| 3UTR-3UTR CCA 90 bp | GATGTGAGCAGTAAGAAAGTGTATCTGCCTCACTGGGTTGTCAGAACAGACAATCCCATAATTCTGTGGTaGACCCTCTACAATCAAATG | + |
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Preference number: 2 (lower is better) Translates to: DVSSKKVYLPHWVVRTDNPIILW*TLYNQM Trigger: CATTTGATTGTAGAGGGTCCACCACAGAATTATGGG...ATTGTCTGTTCTGACAACCCAGTGAGGCAGATACACTTTCTTACTGCTCACATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000280326.9 |
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| 3UTR-3UTR TCA 90 bp | CATGAATGTAGAGAAAACACAATGACCCAAAAGTTAAGACTGGTGAATCTCCAGCTCACCTGTAAGATGTaGGCAGTAAGAAAGTGTATC | + |
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Preference number: 2 (lower is better) Translates to: HECRENTMTQKLRLVNLQLTCKM*AVRKCI Trigger: GATACACTTTCTTACTGCTCACATCTTACAGGTGAG...CTGGAGATTCACCAGTCTTAACTTTTGGGTCATTGTGTTTTCTCTACATTCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000280326.9 |
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| 3UTR-3UTR CCA 90 bp | CATGAATGTAGAGAAAACACAATGACCCAAAAGTTAAGACTGGTGAATCTCCAGCATCCCATAATTCTGTaGTGGACCCTCTACAATCAA | + |
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Preference number: 2 (lower is better) Translates to: HECRENTMTQKLRLVNLQHPIIL*WTLYNQ Trigger: TTGATTGTAGAGGGTCCACCACAGAATTATGGGATG...CTGGAGATTCACCAGTCTTAACTTTTGGGTCATTGTGTTTTCTCTACATTCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000280326.9 |
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| 3UTR CCA 72 bp | GGTGGGGCCGGGGCCAGAGGAAAGCAAAGGCTCACATaGGTCTCCATCAGCCCTAAACAACACGCCAGGTTA | + |
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Preference number: 3 (lower is better) Translates to: GGAGARGKQRLT*VSISPKQHARL Trigger: TAACCTGGCGTGTTGTTTAGGGCTGATGGAGACCCATGTGAGCCTTTGCTTTCCTCTGGCCCCGGCCCCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000280326.9 |
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| 3UTR CCA 72 bp | GCTGGTCCTGATTCTGTGTATGAGCTGTGTTCAGGGTaGGGCCGGGGCCAGAGGAAAGCAAAGGCTCACATG | + |
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Preference number: 3 (lower is better) Translates to: AGPDSVYELCSG*GRGQRKAKAHM Trigger: CATGTGAGCCTTTGCTTTCCTCTGGCCCCGGCCCCACCCTGAACACAGCTCATACACAGAATCAGGACCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000280326.9 |
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| 3UTR CCA 72 bp | CTTCTGATACAACCACAGACCCCTCGGATAAGACTGTaGTCCAAAGAAGGCTGCTGTATGTTCTCTGTAGGC | + |
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Preference number: 3 (lower is better) Translates to: LLIQPQTPRIRL*SKEGCCMFSVG Trigger: GCCTACAGAGAACATACAGCAGCCTTCTTTGGACCACAGTCTTATCCGAGGGGTCTGTGGTTGTATCAGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000280326.9 |
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| 3UTR-3UTR CAA 90 bp | CATGAATGTAGAGAAAACACAATGACCCAAAAGTTAAGACTGGTGAATCTCCAGATCTGCCTCACTGGGTaGTCAGAACAGACAATCCCG | + |
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Preference number: 3 (lower is better) Translates to: HECRENTMTQKLRLVNLQICLTG*SEQTIP Trigger: CGGGATTGTCTGTTCTGACAACCCAGTGAGGCAGAT...CTGGAGATTCACCAGTCTTAACTTTTGGGTCATTGTGTTTTCTCTACATTCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000280326.9 |
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| 3UTR-3UTR CAA 90 bp | GATGTGAGCAGTAAGAAAGTGTATCTGCCTCACTGGGTTGTCAGAACAGACAATTCACAGAAGTGGATCTaGCTACATAGTTTTCTCAAT | + |
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Preference number: 3 (lower is better) Translates to: DVSSKKVYLPHWVVRTDNSQKWI*LHSFLN Trigger: ATTGAGAAAACTATGTAGCAAGATCCACTTCTGTGA...ATTGTCTGTTCTGACAACCCAGTGAGGCAGATACACTTTCTTACTGCTCACATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000280326.9 |
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| CDS-3UTR CCA 90 bp | GGATTGACCTGGCCCTACTACTTGCTGGTGGTGAGATGCTGGCCAATTATGAGTCTAAGCCTGTGCTGGTaGCCAGCTCTGCACATGCTG | + |
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Preference number: 4 (lower is better) Translates to: GLTWPYYLLVVRCWPIMSLSLCW*PALHML Trigger: CAGCATGTGCAGAGCTGGCCACCAGCACAGGCTTAG...ACTCATAATTGGCCAGCATCTCACCACCAGCAAGTAGTAGGGCCAGGTCAATCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000280326.9 |
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| 3UTR CAA 72 bp | GGGTCAGACTGCCTGGGATTGACCTGGCCCTACTACTaGCTGGTGGTGAGATGCTGGCCAATTATGAGTACT | + |
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Preference number: 4 (lower is better) Translates to: GSDCLGLTWPYY*LVVRCWPIMST Trigger: AGTACTCATAATTGGCCAGCATCTCACCACCAGCAAGTAGTAGGGCCAGGTCAATCCCAGGCAGTCTGACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000280326.9 |
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| CDS-3UTR TCA 90 bp | GATGTGAGCAGTAAGAAAGTGTATCTGCCTCACTGGGTTGTCAGAACAGACAATCTCGGCTGTGAGCTCTaGGAACCTGGGGACGATCCG | + |
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Preference number: 4 (lower is better) Translates to: DVSSKKVYLPHWVVRTDNLGCEL*EPGDDP Trigger: CGGATCGTCCCCAGGTTCTCAGAGCTCACAGCCGAG...ATTGTCTGTTCTGACAACCCAGTGAGGCAGATACACTTTCTTACTGCTCACATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000280326.9 |
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| CDS-3UTR TCA 90 bp | GATGTGAGCAGTAAGAAAGTGTATCTGCCTCACTGGGTTGTCAGAACAGACAATAGAGGGCCATGGGGATaGCCTCCAGTGCGTCGGCAA | + |
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Preference number: 4 (lower is better) Translates to: DVSSKKVYLPHWVVRTDNRGPWG*PPVRRQ Trigger: TTGCCGACGCACTGGAGGTCATCCCCATGGCCCTCT...ATTGTCTGTTCTGACAACCCAGTGAGGCAGATACACTTTCTTACTGCTCACATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000280326.9 |
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| CDS-3UTR GCA 90 bp | GATGTGAGCAGTAAGAAAGTGTATCTGCCTCACTGGGTTGTCAGAACAGACAATACTGCCCTAAGCCTGTaGTGGTGGCCAGCTCTGCAC | + |
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Preference number: 4 (lower is better) Translates to: DVSSKKVYLPHWVVRTDNTALSL*WWPALH Trigger: GTGCAGAGCTGGCCACCAGCACAGGCTTAGGGCAGT...ATTGTCTGTTCTGACAACCCAGTGAGGCAGATACACTTTCTTACTGCTCACATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000280326.9 |
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| CDS-3UTR TCA 90 bp | GATGTGAGCAGTAAGAAAGTGTATCTGCCTCACTGGGTTGTCAGAACAGACAATCAGACTGCCTGGGATTaGCCTGGCCCTACTACTTGC | + |
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Preference number: 4 (lower is better) Translates to: DVSSKKVYLPHWVVRTDNQTAWD*PGPTTC Trigger: GCAAGTAGTAGGGCCAGGTCAATCCCAGGCAGTCTG...ATTGTCTGTTCTGACAACCCAGTGAGGCAGATACACTTTCTTACTGCTCACATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000280326.9 |
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| CDS-3UTR TCA 90 bp | GATGTGAGCAGTAAGAAAGTGTATCTGCCTCACTGGGTTGTCAGAACAGACAATGAAACAAGTGGGTTCTaGACTGCCCTAAGCCTGTGC | + |
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Preference number: 4 (lower is better) Translates to: DVSSKKVYLPHWVVRTDNETSGF*TALSLC Trigger: GCACAGGCTTAGGGCAGTTCAGAACCCACTTGTTTC...ATTGTCTGTTCTGACAACCCAGTGAGGCAGATACACTTTCTTACTGCTCACATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000280326.9 |
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| CDS-3UTR GCA 90 bp | GGATTGACCTGGCCCTACTACTTGCTGGTGGTGAGATGCTGGCCAATTATGAGTTGTTCTCATTGTATTTaGTACAGCCTTTGCTGCCAT | + |
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Preference number: 4 (lower is better) Translates to: GLTWPYYLLVVRCWPIMSCSHCI*YSLCCH Trigger: ATGGCAGCAAAGGCTGTAGCAAATACAATGAGAACA...ACTCATAATTGGCCAGCATCTCACCACCAGCAAGTAGTAGGGCCAGGTCAATCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000280326.9 |
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| CDS-3UTR GCA 90 bp | GTCACTCTATCTGAACATGGTAACTGCAAGATTTCTCCCTTATTTCCTGTAATTACTCTGGGGTCAGACTaGCTGGGATTGACCTGGCCC | + |
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Preference number: 4 (lower is better) Translates to: VTLSEHGNCKISPLFPVITLGSD*LGLTWP Trigger: GGGCCAGGTCAATCCCAGGCAGTCTGACCCCAGAGT...AATTACAGGAAATAAGGGAGAAATCTTGCAGTTACCATGTTCAGATAGAGTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000280326.9 |
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| CDS-3UTR CCA 90 bp | GATGTGAGCAGTAAGAAAGTGTATCTGCCTCACTGGGTTGTCAGAACAGACAATCCTCGGATAAGACTGTaGTCCAAAGAAGGCTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: DVSSKKVYLPHWVVRTDNPRIRL*SKEGCC Trigger: ACAGCAGCCTTCTTTGGACCACAGTCTTATCCGAGG...ATTGTCTGTTCTGACAACCCAGTGAGGCAGATACACTTTCTTACTGCTCACATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000280326.9 |
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| CDS-3UTR TCA 90 bp | GTCACTCTATCTGAACATGGTAACTGCAAGATTTCTCCCTTATTTCCTGTAATTGTCGGTGACAACTGTTaGCCACTTTGGAGCCCAGCG | + |
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Preference number: 4 (lower is better) Translates to: VTLSEHGNCKISPLFPVIVGDNC*PLWSPA Trigger: CGCTGGGCTCCAAAGTGGTCAACAGTTGTCACCGAC...AATTACAGGAAATAAGGGAGAAATCTTGCAGTTACCATGTTCAGATAGAGTGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000280326.9 |
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| CDS-3UTR CCA 90 bp | GATGTGAGCAGTAAGAAAGTGTATCTGCCTCACTGGGTTGTCAGAACAGACAATAAGCAAAGGCTCACATaGGTCTCCATCAGCCCTAAA | + |
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Preference number: 4 (lower is better) Translates to: DVSSKKVYLPHWVVRTDNKQRLT*VSISPK Trigger: TTTAGGGCTGATGGAGACCCATGTGAGCCTTTGCTT...ATTGTCTGTTCTGACAACCCAGTGAGGCAGATACACTTTCTTACTGCTCACATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000280326.9 |
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| CDS-3UTR TCA 90 bp | GTGAGGTTCAATTTTGGAAAGGGGGATTGGTTTAGTGGCTCTTCTGATACAACCTTTGCTGCCATTATATaGGACTTGAGGGCCTCAAGT | + |
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Preference number: 4 (lower is better) Translates to: VRFNFGKGDWFSGSSDTTFAAII*DLRASS Trigger: ACTTGAGGCCCTCAAGTCTCATATAATGGCAGCAAA...GGTTGTATCAGAAGAGCCACTAAACCAATCCCCCTTTCCAAAATTGAACCTCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000280326.9 |
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| CDS-3UTR CCA 90 bp | CATGAATGTAGAGAAAACACAATGACCCAAAAGTTAAGACTGGTGAATCTCCAGTCCCCATGGACGCCATaGTGCAACAACCGGAATTAC | + |
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Preference number: 4 (lower is better) Translates to: HECRENTMTQKLRLVNLQSPWTP*CNNRNY Trigger: GTAATTCCGGTTGTTGCACCATGGCGTCCATGGGGA...CTGGAGATTCACCAGTCTTAACTTTTGGGTCATTGTGTTTTCTCTACATTCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000280326.9 |
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| CDS-3UTR CCA 90 bp | GATGTGAGCAGTAAGAAAGTGTATCTGCCTCACTGGGTTGTCAGAACAGACAATCCCTCTACAATCAAATaGCCCACCCATTTAGATAGG | + |
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Preference number: 4 (lower is better) Translates to: DVSSKKVYLPHWVVRTDNPSTIK*PTHLDR Trigger: CCTATCTAAATGGGTGGGCCATTTGATTGTAGAGGG...ATTGTCTGTTCTGACAACCCAGTGAGGCAGATACACTTTCTTACTGCTCACATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000280326.9 |
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| CDS-3UTR TCA 90 bp | GGTGGACCCTCTACAATCAAATGGCCCACCCATTTAGATAGGAAGAGGATCAAGATATTCCTCTCAATATaGAAGTGCATCTTGAGAGCT | + |
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Preference number: 4 (lower is better) Translates to: GGPSTIKWPTHLDRKRIKIFLSI*KCILRA Trigger: AGCTCTCAAGATGCACTTTCATATTGAGAGGAATAT...CTTGATCCTCTTCCTATCTAAATGGGTGGGCCATTTGATTGTAGAGGGTCCACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000280326.9 |
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| CDS-3UTR TCA 90 bp | GTGAGGTTCAATTTTGGAAAGGGGGATTGGTTTAGTGGCTCTTCTGATACAACCAAACAGGAACGTCTGTaGGGTTCAATTTTGGAAAGG | + |
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Preference number: 4 (lower is better) Translates to: VRFNFGKGDWFSGSSDTTKQERL*GSILER Trigger: CCTTTCCAAAATTGAACCTCACAGACGTTCCTGTTT...GGTTGTATCAGAAGAGCCACTAAACCAATCCCCCTTTCCAAAATTGAACCTCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000280326.9 |
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| CDS-3UTR GCA 90 bp | GTCACTCTATCTGAACATGGTAACTGCAAGATTTCTCCCTTATTTCCTGTAATTCCATGGACGCCATGGTaGAACAACCGGAATTACTTC | + |
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Preference number: 4 (lower is better) Translates to: VTLSEHGNCKISPLFPVIPWTPW*NNRNYF Trigger: GAAGTAATTCCGGTTGTTGCACCATGGCGTCCATGG...AATTACAGGAAATAAGGGAGAAATCTTGCAGTTACCATGTTCAGATAGAGTGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000280326.9 |
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| CDS-3UTR GCA 90 bp | CATGAATGTAGAGAAAACACAATGACCCAAAAGTTAAGACTGGTGAATCTCCAGTTGCTGGTGGTGAGATaGTGGCCAATTATGAGTACT | + |
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Preference number: 4 (lower is better) Translates to: HECRENTMTQKLRLVNLQLLVVR*WPIMST Trigger: AGTACTCATAATTGGCCAGCATCTCACCACCAGCAA...CTGGAGATTCACCAGTCTTAACTTTTGGGTCATTGTGTTTTCTCTACATTCATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000280326.9 |
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| CDS-3UTR GCA 90 bp | GTCACTCTATCTGAACATGGTAACTGCAAGATTTCTCCCTTATTTCCTGTAATTTGGTCCAAAGAAGGCTaGTGTATGTTCTCTGTAGGC | + |
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Preference number: 4 (lower is better) Translates to: VTLSEHGNCKISPLFPVIWSKEG*CMFSVG Trigger: GCCTACAGAGAACATACAGCAGCCTTCTTTGGACCA...AATTACAGGAAATAAGGGAGAAATCTTGCAGTTACCATGTTCAGATAGAGTGAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000280326.9 |
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| CDS-3UTR CCA 90 bp | CATGAATGTAGAGAAAACACAATGACCCAAAAGTTAAGACTGGTGAATCTCCAGGTGTATCTGCCTCACTaGGTTGTCAGAACAGACAAT | + |
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Preference number: 4 (lower is better) Translates to: HECRENTMTQKLRLVNLQVYLPH*VVRTDN Trigger: ATTGTCTGTTCTGACAACCCAGTGAGGCAGATACAC...CTGGAGATTCACCAGTCTTAACTTTTGGGTCATTGTGTTTTCTCTACATTCATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000280326.9 |
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| CDS-3UTR TCA 90 bp | GTCACTCTATCTGAACATGGTAACTGCAAGATTTCTCCCTTATTTCCTGTAATTATCTCCAGGTTCACATaGGACGGTAACCCAAATTCA | + |
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Preference number: 4 (lower is better) Translates to: VTLSEHGNCKISPLFPVIISRFT*DGNPNS Trigger: TGAATTTGGGTTACCGTCTCATGTGAACCTGGAGAT...AATTACAGGAAATAAGGGAGAAATCTTGCAGTTACCATGTTCAGATAGAGTGAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000280326.9 |
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| CDS-3UTR CCA 90 bp | GTCACTCTATCTGAACATGGTAACTGCAAGATTTCTCCCTTATTTCCTGTAATTTTTGGAAAGGGGGATTaGTTTAGTGGCTCTTCTGAT | + |
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Preference number: 4 (lower is better) Translates to: VTLSEHGNCKISPLFPVIFGKGD*FSGSSD Trigger: ATCAGAAGAGCCACTAAACCAATCCCCCTTTCCAAA...AATTACAGGAAATAAGGGAGAAATCTTGCAGTTACCATGTTCAGATAGAGTGAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000280326.9 |
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| CDS-3UTR GCA 90 bp | GTCACTCTATCTGAACATGGTAACTGCAAGATTTCTCCCTTATTTCCTGTAATTTCTGAACATGGTAACTaGAAGATTTCTCCCTTATTT | + |
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Preference number: 4 (lower is better) Translates to: VTLSEHGNCKISPLFPVISEHGN*KISPLF Trigger: AAATAAGGGAGAAATCTTGCAGTTACCATGTTCAGA...AATTACAGGAAATAAGGGAGAAATCTTGCAGTTACCATGTTCAGATAGAGTGAC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000280326.9 |
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| CDS TCA 90 bp | GGGTGGACCAGCGAAAGGTTAAGCAGCAGCGCCTTAACCGACAGGTaGCAGAGCATCTCCCCGGCGCCCTCCCACTGGAGCGCAGTCCCA | + |
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Preference number: 5 (lower is better) Translates to: GWTSERLSSSALTDR*QSISPAPSHWSAVP Trigger: TGGGACTGCGCTCCAGTGGGAGGGCGCCGGGGAGATGCTCTGTCACCTGTCGGTTAAGGCGCTGCTGCTTAACCTTTCGCTGGTCCACCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000506600.1 ENST00000515676.5 |
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| CDS-3UTR CAA 90 bp | GGTGGACCCTCTACAATCAAATGGCCCACCCATTTAGATAGGAAGAGGATCAAGATCTGCCTCACTGGGTaGTCAGAACAGACAATCCCG | + |
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Preference number: 5 (lower is better) Translates to: GGPSTIKWPTHLDRKRIKICLTG*SEQTIP Trigger: CGGGATTGTCTGTTCTGACAACCCAGTGAGGCAGAT...CTTGATCCTCTTCCTATCTAAATGGGTGGGCCATTTGATTGTAGAGGGTCCACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000280326.9 |
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| CDS-3UTR CAA 90 bp | GGTGGACCCTCTACAATCAAATGGCCCACCCATTTAGATAGGAAGAGGATCAAGCAACTGTTGACCACTTaGGAGCCCAGCGTGGTTTTT | + |
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Preference number: 5 (lower is better) Translates to: GGPSTIKWPTHLDRKRIKQLLTT*EPSVVF Trigger: AAAAACCACGCTGGGCTCCAAAGTGGTCAACAGTTG...CTTGATCCTCTTCCTATCTAAATGGGTGGGCCATTTGATTGTAGAGGGTCCACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000280326.9 |
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| CDS GCA 90 bp | CAACGACAGGGCCAAGTGAGACAACACAGGGAGAGAATTTCAAAATaGCAGGGAACACCAGAAACACACAGCACTGTTATCCAAACAGTA | + |
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Preference number: 5 (lower is better) Translates to: QRQGQVRQHRERISK*QGTPETHSTVIQTV Trigger: TACTGTTTGGATAACAGTGCTGTGTGTTTCTGGTGTTCCCTGGCATTTTGAAATTCTCTCCCTGTGTTGTCTCACTTGGCCCTGTCGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509846.1 |
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| CDS-3UTR CAA 90 bp | CATGAATGTAGAGAAAACACAATGACCCAAAAGTTAAGACTGGTGAATCTCCAGACCTGGCCCTACTACTaGCTGGTGGTGAGATGCTGG | + |
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Preference number: 5 (lower is better) Translates to: HECRENTMTQKLRLVNLQTWPYY*LVVRCW Trigger: CCAGCATCTCACCACCAGCAAGTAGTAGGGCCAGGT...CTGGAGATTCACCAGTCTTAACTTTTGGGTCATTGTGTTTTCTCTACATTCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000280326.9 |
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| CDS-3UTR CAA 90 bp | GGATTGACCTGGCCCTACTACTTGCTGGTGGTGAGATGCTGGCCAATTATGAGTTCACAGAAGTGGATCTaGCTACATAGTTTTCTCAAT | + |
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Preference number: 5 (lower is better) Translates to: GLTWPYYLLVVRCWPIMSSQKWI*LHSFLN Trigger: ATTGAGAAAACTATGTAGCAAGATCCACTTCTGTGA...ACTCATAATTGGCCAGCATCTCACCACCAGCAAGTAGTAGGGCCAGGTCAATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000280326.9 |
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| CDS TCA 90 bp | TTTGTAGCATGTTTTCAACTTGGATTTGTCTGTCTCCTCATGCTCTaGTTCAGAGACAACAATCTCAGCAGGCATGTTAGCCCTGTGGTC | + |
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Preference number: 5 (lower is better) Translates to: FVACFQLGFVCLLML*FRDNNLSRHVSPVV Trigger: GACCACAGGGCTAACATGCCTGCTGAGATTGTTGTCTCTGAATCAGAGCATGAGGAGACAGACAAATCCAAGTTGAAAACATGCTACAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508451.1 |
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| CDS GCA 90 bp | TGGCCTCCACTATCGGATAATATTTATCTTTCTAGCTTTCCTTCCTaGAATGTAGTTAACAAAATTCAAGAGGCAGAGGCGGCCAGTGAC | + |
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Preference number: 5 (lower is better) Translates to: WPPLSDNIYLSSFPS*NVVNKIQEAEAASD Trigger: GTCACTGGCCGCCTCTGCCTCTTGAATTTTGTTAACTACATTGCAGGAAGGAAAGCTAGAAAGATAAATATTATCCGATAGTGGAGGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511995.1 |
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| CDS CCA 90 bp | AAAAACTCATTCTCAAAGAACAGAGATCGTCAATGGTTATTCACTTaGGTTCCCTTTTTCTACCTAAGGGACAGATGTAAGTCATCCTTG | + |
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Preference number: 5 (lower is better) Translates to: KNSFSKNRDRQWLFT*VPFFYLRDRCKSSL Trigger: CAAGGATGACTTACATCTGTCCCTTAGGTAGAAAAAGGGAACCCAAGTGAATAACCATTGACGATCTCTGTTCTTTGAGAATGAGTTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000511995.1 |
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| CDS CCA 90 bp | TCACAATGTGCTAAAAACTCATTCTCAAAGAACAGAGATCGTCAATaGTTATTCACTTGGGTTCCCTTTTTCTACCTAAGGGACAGATGT | + |
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Preference number: 5 (lower is better) Translates to: SQCAKNSFSKNRDRQ*LFTWVPFFYLRDRC Trigger: ACATCTGTCCCTTAGGTAGAAAAAGGGAACCCAAGTGAATAACCATTGACGATCTCTGTTCTTTGAGAATGAGTTTTTAGCACATTGTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000511995.1 |
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| CDS TCA 72 bp | GAGGCGGTCCCGCTTTGCTCCCGCGGGCGACCGGACTaGGCGGCCCCACCCAGCTCCGAAGGGCGCTGGCGG | + |
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Preference number: 6 (lower is better) Translates to: EAVPLCSRGRPD*AAPPSSEGRWR Trigger: CCGCCAGCGCCCTTCGGAGCTGGGTGGGGCCGCTCAGTCCGGTCGCCCGCGGGAGCAAAGCGGGACCGCCTC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000506600.1 ENST00000515676.5 |
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| CDS CCA 72 bp | ACCCAGCTCCGAAGGGCGCTGGCGGCCCAGCCTGGCTaGCCCCCACATTCCGAGCCCAGGATTAGGCGCCGG | + |
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Preference number: 6 (lower is better) Translates to: TQLRRALAAQPG*PPHSEPRIRRR Trigger: CCGGCGCCTAATCCTGGGCTCGGAATGTGGGGGCCAGCCAGGCTGGGCCGCCAGCGCCCTTCGGAGCTGGGT 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000506600.1 ENST00000515676.5 |
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| CDS TCA 72 bp | AGCGAAAGGTTAAGCAGCAGCGCCTTAACCGACAGGTaGCAGAGCATCTCCCCGGCGCCCTCCCACTGGAGC | + |
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Preference number: 6 (lower is better) Translates to: SERLSSSALTDR*QSISPAPSHWS Trigger: GCTCCAGTGGGAGGGCGCCGGGGAGATGCTCTGTCACCTGTCGGTTAAGGCGCTGCTGCTTAACCTTTCGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000506600.1 ENST00000515676.5 |
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| CDS CAA 72 bp | GAGACTTTACGAGTGACAAAGAAAACGGAAGGGCCGTaGCGGGTGGACCAGCGAAAGGTTAAGCAGCAGCGC | + |
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Preference number: 6 (lower is better) Translates to: ETLRVTKKTEGP*RVDQRKVKQQR Trigger: GCGCTGCTGCTTAACCTTTCGCTGGTCCACCCGCAACGGCCCTTCCGTTTTCTTTGTCACTCGTAAAGTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000506600.1 ENST00000515676.5 |
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| CDS CAA 90 bp | CCATTATATGAGACTTTACGAGTGACAAAGAAAACGGAAGGGCCGTaGCGGGTGGACCAGCGAAAGGTTAAGCAGCAGCGCCTTAACCGA | + |
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Preference number: 6 (lower is better) Translates to: PLYETLRVTKKTEGP*RVDQRKVKQQRLNR Trigger: TCGGTTAAGGCGCTGCTGCTTAACCTTTCGCTGGTCCACCCGCAACGGCCCTTCCGTTTTCTTTGTCACTCGTAAAGTCTCATATAATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000506600.1 ENST00000515676.5 |
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| CDS GCA 72 bp | GGCCAAGTGAGACAACACAGGGAGAGAATTTCAAAATaGCAGGGAACACCAGAAACACACAGCACTGTTATC | + |
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Preference number: 6 (lower is better) Translates to: GQVRQHRERISK*QGTPETHSTVI Trigger: GATAACAGTGCTGTGTGTTTCTGGTGTTCCCTGGCATTTTGAAATTCTCTCCCTGTGTTGTCTCACTTGGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509846.1 |
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| CDS CCA 72 bp | TTCTCAAAGAACAGAGATCGTCAATGGTTATTCACTTaGGTTCCCTTTTTCTACCTAAGGGACAGATGTAAG | + |
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Preference number: 6 (lower is better) Translates to: FSKNRDRQWLFT*VPFFYLRDRCK Trigger: CTTACATCTGTCCCTTAGGTAGAAAAAGGGAACCCAAGTGAATAACCATTGACGATCTCTGTTCTTTGAGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000511995.1 |
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| CDS CCA 72 bp | GCTAAAAACTCATTCTCAAAGAACAGAGATCGTCAATaGTTATTCACTTGGGTTCCCTTTTTCTACCTAAGG | + |
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Preference number: 6 (lower is better) Translates to: AKNSFSKNRDRQ*LFTWVPFFYLR Trigger: CCTTAGGTAGAAAAAGGGAACCCAAGTGAATAACCATTGACGATCTCTGTTCTTTGAGAATGAGTTTTTAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000511995.1 |
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| CDS CCA 72 bp | AAAGTCCGACATTTGTTTTGTAGCATGTTTTCAACTTaGATTTGTCTGTCTCCTCATGCTCTGATTCAGAGA | + |
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Preference number: 6 (lower is better) Translates to: KVRHLFCSMFST*ICLSPHALIQR Trigger: TCTCTGAATCAGAGCATGAGGAGACAGACAAATCCAAGTTGAAAACATGCTACAAAACAAATGTCGGACTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000508451.1 |
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