Pregenerated sensors for CCT2 (Homo sapiens)
Ensembl gene IDs: ENSG00000166226Ensembl transcript IDs: ENST00000299300.11, ENST00000543146.2, ENST00000544368.6, ENST00000546859.5, ENST00000548787.1, ENST00000549933.5, ENST00000550010.5, ENST00000550455.5, ENST00000550638.5, ENST00000551620.5, ENST00000551899.5, ENST00000553169.1
Found 109 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCTGGGTGCCGCTTTGATGATGTTGTCCACACGCAGAATCACCTCTaGTGCTTCAGCTGCACTCAGAAGAACCTGTCGCTTCACTTGAAA | + |
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Preference number: 1 (lower is better) Translates to: PGCRFDDVVHTQNHL*CFSCTQKNLSLHLK Trigger: TTTCAAGTGAAGCGACAGGTTCTTCTGAGTGCAGCTGAAGCAGCAGAGGTGATTCTGCGTGTGGACAACATCATCAAAGCGGCACCCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550010.5 |
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| 3UTR GCA 90 bp | GGGTGCCGCTTTGATGATGTTGTCCACACGCAGAATCACCTCTGCTaGTTCAGCTGCACTCAGAAGAACCTGTCGCTTCACTTGAAAACT | + |
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Preference number: 1 (lower is better) Translates to: GCRFDDVVHTQNHLC*FSCTQKNLSLHLKT Trigger: AGTTTTCAAGTGAAGCGACAGGTTCTTCTGAGTGCAGCTGAAGCAGCAGAGGTGATTCTGCGTGTGGACAACATCATCAAAGCGGCACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000550010.5 |
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| 3UTR TCA 90 bp | ACCTCTGCTGCTTCAGCTGCACTCAGAAGAACCTGTCGCTTCACTTaGAAACTTTCTGTTATACCCAGGATAGCCATATCTCCAATGGTG | + |
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Preference number: 1 (lower is better) Translates to: TSAASAALRRTCRFT*KLSVIPRIAISPMV Trigger: CACCATTGGAGATATGGCTATCCTGGGTATAACAGAAAGTTTTCAAGTGAAGCGACAGGTTCTTCTGAGTGCAGCTGAAGCAGCAGAGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550010.5 |
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| 3UTR GCA 90 bp | TTTGATGATGTTGTCCACACGCAGAATCACCTCTGCTGCTTCAGCTaGACTCAGAAGAACCTGTCGCTTCACTTGAAAACTTTCTGTTAT | + |
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Preference number: 1 (lower is better) Translates to: FDDVVHTQNHLCCFS*TQKNLSLHLKTFCY Trigger: ATAACAGAAAGTTTTCAAGTGAAGCGACAGGTTCTTCTGAGTGCAGCTGAAGCAGCAGAGGTGATTCTGCGTGTGGACAACATCATCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000550010.5 |
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| 3UTR-3UTR TCA 90 bp | CCTGGGTGCCGCTTTGATGATGTTGTCCACACGCAGAATCACCTCTGCTGCTTCCACTGTGAGCAGCCCTaGGCTGTGCCACCAGGTCTG | + |
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Preference number: 2 (lower is better) Translates to: PGCRFDDVVHTQNHLCCFHCEQP*AVPPGL Trigger: CAGACCTGGTGGCACAGCTCAGGGCTGCTCACAGTG...GAAGCAGCAGAGGTGATTCTGCGTGTGGACAACATCATCAAAGCGGCACCCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550010.5 |
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| 3UTR-3UTR GCA 90 bp | CGTTTCCTGGGTGCCGCTTTGATGATGTTGTCCACACGCAGAATCACCTCTGCTCTGTGCCACCAGGTCTaGACTGTCATAGCCTGCATT | + |
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Preference number: 2 (lower is better) Translates to: RFLGAALMMLSTRRITSALCHQV*TVIACI Trigger: AATGCAGGCTATGACAGTGCAGACCTGGTGGCACAG...AGCAGAGGTGATTCTGCGTGTGGACAACATCATCAAAGCGGCACCCAGGAAACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550010.5 |
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| 3UTR-3UTR GCA 90 bp | GAATCACCTCTGCTGCTTCAGCTGCACTCAGAAGAACCTGTCGCTTCACTTGAAATCCAGCAGTGGTATTaGCTTCACTGTGAGCAGCCC | + |
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Preference number: 2 (lower is better) Translates to: ESPLLLQLHSEEPVASLEIQQWY*LHCEQP Trigger: GGGCTGCTCACAGTGAAGGCAATACCACTGCTGGAT...TTCAAGTGAAGCGACAGGTTCTTCTGAGTGCAGCTGAAGCAGCAGAGGTGATTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550010.5 |
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| 3UTR-3UTR CCA 90 bp | CGCTTTGATGATGTTGTCCACACGCAGAATCACCTCTGCTGCTTCAGCTGCACTTATCCAATCCAGCAGTaGTATTGCCTTCACTGTGAG | + |
|
Preference number: 2 (lower is better) Translates to: RFDDVVHTQNHLCCFSCTYPIQQ*YCLHCE Trigger: CTCACAGTGAAGGCAATACCACTGCTGGATTGGATA...AGTGCAGCTGAAGCAGCAGAGGTGATTCTGCGTGTGGACAACATCATCAAAGCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550010.5 |
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| 3UTR-3UTR CCA 90 bp | TGTTGTCCACACGCAGAATCACCTCTGCTGCTTCAGCTGCACTCAGAAGAACCTAACTTTGCTAGAAACTaGTCCAAAGATCGACAGCAC | + |
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Preference number: 2 (lower is better) Translates to: CCPHAESPLLLQLHSEEPNFARN*SKDRQH Trigger: GTGCTGTCGATCTTTGGACCAGTTTCTAGCAAAGTT...AGGTTCTTCTGAGTGCAGCTGAAGCAGCAGAGGTGATTCTGCGTGTGGACAACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550010.5 |
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| 3UTR CAA 90 bp | CACCTCTGCTGCTTCAGCTGCACTCAGAAGAACCTGTCGCTTCACTaGAAAACTTTCTGTTATACCCAGGATAGCCATATCTCCAATGGT | + |
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Preference number: 2 (lower is better) Translates to: HLCCFSCTQKNLSLH*KTFCYTQDSHISNG Trigger: ACCATTGGAGATATGGCTATCCTGGGTATAACAGAAAGTTTTCAAGTGAAGCGACAGGTTCTTCTGAGTGCAGCTGAAGCAGCAGAGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000550010.5 |
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| 3UTR TCA 72 bp | ATCCAGCAGTGGTATTGCCTTCACTGTGAGCAGCCCTaGGCTGTGCCACCAGGTCTGCACTGTCATAGCCTG | + |
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Preference number: 3 (lower is better) Translates to: IQQWYCLHCEQP*AVPPGLHCHSL Trigger: CAGGCTATGACAGTGCAGACCTGGTGGCACAGCTCAGGGCTGCTCACAGTGAAGGCAATACCACTGCTGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550010.5 |
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| 3UTR GCA 72 bp | GTTGTCCACACGCAGAATCACCTCTGCTGCTTCAGCTaGACTCAGAAGAACCTGTCGCTTCACTTGAAAACT | + |
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Preference number: 3 (lower is better) Translates to: VVHTQNHLCCFS*TQKNLSLHLKT Trigger: AGTTTTCAAGTGAAGCGACAGGTTCTTCTGAGTGCAGCTGAAGCAGCAGAGGTGATTCTGCGTGTGGACAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000550010.5 |
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| 3UTR GCA 72 bp | TTTGATGATGTTGTCCACACGCAGAATCACCTCTGCTaGTTCAGCTGCACTCAGAAGAACCTGTCGCTTCAC | + |
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Preference number: 3 (lower is better) Translates to: FDDVVHTQNHLC*FSCTQKNLSLH Trigger: GTGAAGCGACAGGTTCTTCTGAGTGCAGCTGAAGCAGCAGAGGTGATTCTGCGTGTGGACAACATCATCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550010.5 |
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| CDS-3UTR TCA 90 bp | CCTGGGTGCCGCTTTGATGATGTTGTCCACACGCAGAATCACCTCTGCTGCTTCAGTTCCGCACACAAGTaGATCCCCTCACAGCTCGTG | + |
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Preference number: 4 (lower is better) Translates to: PGCRFDDVVHTQNHLCCFSSAHK*IPSQLV Trigger: CACGAGCTGTGAGGGGATTCACTTGTGTGCGGAACT...GAAGCAGCAGAGGTGATTCTGCGTGTGGACAACATCATCAAAGCGGCACCCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000550010.5 |
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| CDS-3UTR GCA 90 bp | CCTGGGTGCCGCTTTGATGATGTTGTCCACACGCAGAATCACCTCTGCTGCTTCCTCTGCTGCTTCAGCTaGACTCAGAAGAACCTGTCG | + |
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Preference number: 4 (lower is better) Translates to: PGCRFDDVVHTQNHLCCFLCCFS*TQKNLS Trigger: CGACAGGTTCTTCTGAGTGCAGCTGAAGCAGCAGAG...GAAGCAGCAGAGGTGATTCTGCGTGTGGACAACATCATCAAAGCGGCACCCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550010.5 |
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| CDS-3UTR CCA 90 bp | TCCAATGGTGCCTTCCCTCATATCCAATCCAGCAGTGGTATTGCCTTCACTGTGGGGAAAGGGACGCCATaGTTCCGAGGAGTTCCGCAC | + |
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Preference number: 4 (lower is better) Translates to: SNGAFPHIQSSSGIAFTVGKGTP*FRGVPH Trigger: GTGCGGAACTCCTCGGAACCATGGCGTCCCTTTCCC...CACAGTGAAGGCAATACCACTGCTGGATTGGATATGAGGGAAGGCACCATTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000550010.5 |
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| 3UTR CAA 72 bp | TCAGGGACACGTTTCCTGGGTGCCGCTTTGATGATGTaGTCCACACGCAGAATCACCTCTGCTGCTTCAGCT | + |
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Preference number: 4 (lower is better) Translates to: SGTRFLGAALMM*STRRITSAASA Trigger: AGCTGAAGCAGCAGAGGTGATTCTGCGTGTGGACAACATCATCAAAGCGGCACCCAGGAAACGTGTCCCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550010.5 |
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| CDS-3UTR TCA 90 bp | CCTGGGTGCCGCTTTGATGATGTTGTCCACACGCAGAATCACCTCTGCTGCTTCCAATTTCACCACCTGTaGCAAGAGCTAGGCGTTCCA | + |
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Preference number: 4 (lower is better) Translates to: PGCRFDDVVHTQNHLCCFQFHHL*QELGVP Trigger: TGGAACGCCTAGCTCTTGTCACAGGTGGTGAAATTG...GAAGCAGCAGAGGTGATTCTGCGTGTGGACAACATCATCAAAGCGGCACCCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550010.5 |
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| CDS-3UTR GCA 90 bp | CCTCATATCCAATCCAGCAGTGGTATTGCCTTCACTGTGAGCAGCCCTGAGCTGCAGACGAGCTGTCTCTaGTCTCTCTTCATCAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: PHIQSSSGIAFTVSSPELQTSCL*SLFISS Trigger: GGAGCTGATGAAGAGAGAGCAGAGACAGCTCGTCTG...CAGCTCAGGGCTGCTCACAGTGAAGGCAATACCACTGCTGGATTGGATATGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550010.5 |
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| CDS-3UTR GCA 90 bp | CCTGGGTGCCGCTTTGATGATGTTGTCCACACGCAGAATCACCTCTGCTGCTTCGGAACCATGATCAACTaGAGAACTCAACAGCGCCTC | + |
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Preference number: 4 (lower is better) Translates to: PGCRFDDVVHTQNHLCCFGTMIN*RTQQRL Trigger: GAGGCGCTGTTGAGTTCTGCAGTTGATCATGGTTCC...GAAGCAGCAGAGGTGATTCTGCGTGTGGACAACATCATCAAAGCGGCACCCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550010.5 |
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| CDS-3UTR GCA 90 bp | GATGTTGTCCACACGCAGAATCACCTCTGCTGCTTCAGCTGCACTCAGAAGAACCTGTGCCACCAGGTCTaGACTGTCATAGCCTGCATT | + |
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Preference number: 4 (lower is better) Translates to: DVVHTQNHLCCFSCTQKNLCHQV*TVIACI Trigger: AATGCAGGCTATGACAGTGCAGACCTGGTGGCACAG...GTTCTTCTGAGTGCAGCTGAAGCAGCAGAGGTGATTCTGCGTGTGGACAACATC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550010.5 |
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| CDS-3UTR GCA 90 bp | TGTTGTCCACACGCAGAATCACCTCTGCTGCTTCAGCTGCACTCAGAAGAACCTACGCAGAATCACCTCTaGTGCTTCAGCTGCACTCAG | + |
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Preference number: 4 (lower is better) Translates to: CCPHAESPLLLQLHSEEPTQNHL*CFSCTQ Trigger: CTGAGTGCAGCTGAAGCAGCAGAGGTGATTCTGCGT...AGGTTCTTCTGAGTGCAGCTGAAGCAGCAGAGGTGATTCTGCGTGTGGACAACA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550010.5 |
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| CDS-3UTR GCA 90 bp | CGTTTCCTGGGTGCCGCTTTGATGATGTTGTCCACACGCAGAATCACCTCTGCTGACACGTTTCCTGGGTaGCGCTTTGATGATGTTGTC | + |
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Preference number: 4 (lower is better) Translates to: RFLGAALMMLSTRRITSADTFPG*RFDDVV Trigger: GACAACATCATCAAAGCGGCACCCAGGAAACGTGTC...AGCAGAGGTGATTCTGCGTGTGGACAACATCATCAAAGCGGCACCCAGGAAACG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550010.5 |
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| CDS-3UTR CCA 90 bp | AGCCATATCTCCAATGGTGCCTTCCCTCATATCCAATCCAGCAGTGGTATTGCCCTCTTGCAGCCTTCGTaGCTTCTCTCCAACCCGCTA | + |
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Preference number: 4 (lower is better) Translates to: SHISNGAFPHIQSSSGIALLQPS*LLSNPL Trigger: TAGCGGGTTGGAGAGAAGCCACGAAGGCTGCAAGAG...GGCAATACCACTGCTGGATTGGATATGAGGGAAGGCACCATTGGAGATATGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550010.5 |
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| CDS-3UTR TCA 90 bp | CACTTGAAAACTTTCTGTTATACCCAGGATAGCCATATCTCCAATGGTGCCTTCCACTGTGAGCAGCCCTaGGCTGTGCCACCAGGTCTG | + |
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Preference number: 4 (lower is better) Translates to: HLKTFCYTQDSHISNGAFHCEQP*AVPPGL Trigger: CAGACCTGGTGGCACAGCTCAGGGCTGCTCACAGTG...GAAGGCACCATTGGAGATATGGCTATCCTGGGTATAACAGAAAGTTTTCAAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000550010.5 |
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| CDS-3UTR GCA 90 bp | TCCAATGGTGCCTTCCCTCATATCCAATCCAGCAGTGGTATTGCCTTCACTGTGATCCAGCAGTGGTATTaGCTTCACTGTGAGCAGCCC | + |
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Preference number: 4 (lower is better) Translates to: SNGAFPHIQSSSGIAFTVIQQWY*LHCEQP Trigger: GGGCTGCTCACAGTGAAGGCAATACCACTGCTGGAT...CACAGTGAAGGCAATACCACTGCTGGATTGGATATGAGGGAAGGCACCATTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550010.5 |
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| CDS-3UTR CCA 90 bp | TGTTGTCCACACGCAGAATCACCTCTGCTGCTTCAGCTGCACTCAGAAGAACCTCACCACGCAAAACAATaGTACAAGCCTCACCAAGGG | + |
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Preference number: 4 (lower is better) Translates to: CCPHAESPLLLQLHSEEPHHAKQ*YKPHQG Trigger: CCCTTGGTGAGGCTTGTACCATTGTTTTGCGTGGTG...AGGTTCTTCTGAGTGCAGCTGAAGCAGCAGAGGTGATTCTGCGTGTGGACAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000550010.5 |
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| CDS-3UTR TCA 90 bp | AGCCATATCTCCAATGGTGCCTTCCCTCATATCCAATCCAGCAGTGGTATTGCCCTCTCCAACCCGCTATaGTGGTCTGTGGATGAATCT | + |
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Preference number: 4 (lower is better) Translates to: SHISNGAFPHIQSSSGIALSNPL*WSVDES Trigger: AGATTCATCCACAGACCATCATAGCGGGTTGGAGAG...GGCAATACCACTGCTGGATTGGATATGAGGGAAGGCACCATTGGAGATATGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550010.5 |
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| CDS-3UTR TCA 90 bp | TCCAATGGTGCCTTCCCTCATATCCAATCCAGCAGTGGTATTGCCTTCACTGTGCTGCATTGTCAGCTATaGTGGTTGGCAACTCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: SNGAFPHIQSSSGIAFTVLHCQL*WLATPP Trigger: TGGAGGAGTTGCCAACCATCATAGCTGACAATGCAG...CACAGTGAAGGCAATACCACTGCTGGATTGGATATGAGGGAAGGCACCATTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550010.5 |
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| CDS-3UTR GCA 90 bp | CGCTTTGATGATGTTGTCCACACGCAGAATCACCTCTGCTGCTTCAGCTGCACTCTTTGGGTCCCAAGGTaGTCTTTACCAAGTCTCCAA | + |
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Preference number: 4 (lower is better) Translates to: RFDDVVHTQNHLCCFSCTLWVPR*SLPSLQ Trigger: TTGGAGACTTGGTAAAGAGCACCTTGGGACCCAAAG...AGTGCAGCTGAAGCAGCAGAGGTGATTCTGCGTGTGGACAACATCATCAAAGCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550010.5 |
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| CDS-3UTR GCA 90 bp | GATGTTGTCCACACGCAGAATCACCTCTGCTGCTTCAGCTGCACTCAGAAGAACGAAGAATTTTGTCCATaGCTTTGGGTCCCAAGGTGC | + |
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Preference number: 4 (lower is better) Translates to: DVVHTQNHLCCFSCTQKNEEFCP*LWVPRC Trigger: GCACCTTGGGACCCAAAGGCATGGACAAAATTCTTC...GTTCTTCTGAGTGCAGCTGAAGCAGCAGAGGTGATTCTGCGTGTGGACAACATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000550010.5 |
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| CDS-3UTR GCA 90 bp | CGTTTCCTGGGTGCCGCTTTGATGATGTTGTCCACACGCAGAATCACCTCTGCTCACACCTGCAAAATCTaGATGCTCAATAGCCATGAC | + |
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Preference number: 4 (lower is better) Translates to: RFLGAALMMLSTRRITSAHTCKI*MLNSHD Trigger: GTCATGGCTATTGAGCATGCAGATTTTGCAGGTGTG...AGCAGAGGTGATTCTGCGTGTGGACAACATCATCAAAGCGGCACCCAGGAAACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000550010.5 |
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| CDS-3UTR GCA 90 bp | GGTGCCTTCCCTCATATCCAATCCAGCAGTGGTATTGCCTTCACTGTGAGCAGCCCATATCTCCAATGGTaGCTTCCCTCATATCCAATC | + |
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Preference number: 4 (lower is better) Translates to: GAFPHIQSSSGIAFTVSSPYLQW*LPSYPI Trigger: GATTGGATATGAGGGAAGGCACCATTGGAGATATGG...GCTGCTCACAGTGAAGGCAATACCACTGCTGGATTGGATATGAGGGAAGGCACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550010.5 |
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| CDS-3UTR CCA 90 bp | CCTCATATCCAATCCAGCAGTGGTATTGCCTTCACTGTGAGCAGCCCTGAGCTGTTTTGTCCATGCCTTTaGGTCCCAAGGTGCTCTTTA | + |
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Preference number: 4 (lower is better) Translates to: PHIQSSSGIAFTVSSPELFCPCL*VPRCSL Trigger: TAAAGAGCACCTTGGGACCCAAAGGCATGGACAAAA...CAGCTCAGGGCTGCTCACAGTGAAGGCAATACCACTGCTGGATTGGATATGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000550010.5 |
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| CDS-3UTR TCA 90 bp | TCCAATGGTGCCTTCCCTCATATCCAATCCAGCAGTGGTATTGCCTTCACTGTGCAGAGCCTTTCAGTCTaGGAACTGCTTCTACAGCTA | + |
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Preference number: 4 (lower is better) Translates to: SNGAFPHIQSSSGIAFTVQSLSV*ELLLQL Trigger: TAGCTGTAGAAGCAGTTCTCAGACTGAAAGGCTCTG...CACAGTGAAGGCAATACCACTGCTGGATTGGATATGAGGGAAGGCACCATTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550010.5 |
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| CDS-3UTR GCA 90 bp | CGTTTCCTGGGTGCCGCTTTGATGATGTTGTCCACACGCAGAATCACCTCTGCTAGGCATCTCGTCCACTaGTTAGAAGAATTTTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: RFLGAALMMLSTRRITSARHLVH*LEEFCP Trigger: TGGACAAAATTCTTCTAAGCAGTGGACGAGATGCCT...AGCAGAGGTGATTCTGCGTGTGGACAACATCATCAAAGCGGCACCCAGGAAACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000550010.5 |
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| CDS-3UTR GCA 90 bp | CGCTTTGATGATGTTGTCCACACGCAGAATCACCTCTGCTGCTTCAGCTGCACTCTTGATAATATGAATTaGCTCCAGGTTGCCAGAGCC | + |
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Preference number: 4 (lower is better) Translates to: RFDDVVHTQNHLCCFSCTLDNMN*LQVARA Trigger: GGCTCTGGCAACCTGGAGGCAATTCATATTATCAAG...AGTGCAGCTGAAGCAGCAGAGGTGATTCTGCGTGTGGACAACATCATCAAAGCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550010.5 |
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| CDS-3UTR GCA 90 bp | TGTTGTCCACACGCAGAATCACCTCTGCTGCTTCAGCTGCACTCAGAAGAACCTCCTGCAAAATCTGCATaGTCAATAGCCATGACACCA | + |
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Preference number: 4 (lower is better) Translates to: CCPHAESPLLLQLHSEEPPAKSA*SIAMTP Trigger: TGGTGTCATGGCTATTGAGCATGCAGATTTTGCAGG...AGGTTCTTCTGAGTGCAGCTGAAGCAGCAGAGGTGATTCTGCGTGTGGACAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000550010.5 |
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| CDS-3UTR CCA 90 bp | CGCTTTGATGATGTTGTCCACACGCAGAATCACCTCTGCTGCTTCAGCTGCACTGTCAGCTATGATGGTTaGCAACTCCTCCATAAACTG | + |
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Preference number: 4 (lower is better) Translates to: RFDDVVHTQNHLCCFSCTVSYDG*QLLHKL Trigger: CAGTTTATGGAGGAGTTGCCAACCATCATAGCTGAC...AGTGCAGCTGAAGCAGCAGAGGTGATTCTGCGTGTGGACAACATCATCAAAGCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550010.5 |
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| CDS-3UTR TCA 90 bp | TCCAATGGTGCCTTCCCTCATATCCAATCCAGCAGTGGTATTGCCTTCACTGTGGCAACCCCAGAAAAGTaGATGAGTTTGTCTTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: SNGAFPHIQSSSGIAFTVATPEK*MSLSSP Trigger: TGGAGAAGACAAACTCATTCACTTTTCTGGGGTTGC...CACAGTGAAGGCAATACCACTGCTGGATTGGATATGAGGGAAGGCACCATTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000550010.5 |
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| CDS-3UTR TCA 90 bp | CCTCATATCCAATCCAGCAGTGGTATTGCCTTCACTGTGAGCAGCCCTGAGCTGTCATCTAAAATTTGTTaGGTGGCACCACGCAAAACA | + |
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Preference number: 4 (lower is better) Translates to: PHIQSSSGIAFTVSSPELSSKIC*VAPRKT Trigger: TGTTTTGCGTGGTGCCACTCAACAAATTTTAGATGA...CAGCTCAGGGCTGCTCACAGTGAAGGCAATACCACTGCTGGATTGGATATGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000550010.5 |
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| CDS-3UTR TCA 90 bp | GATGTTGTCCACACGCAGAATCACCTCTGCTGCTTCAGCTGCACTCAGAAGAACACCTGTCGCTTCACTTaGAAACTTTCTGTTATACCC | + |
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Preference number: 4 (lower is better) Translates to: DVVHTQNHLCCFSCTQKNTCRFT*KLSVIP Trigger: GGGTATAACAGAAAGTTTTCAAGTGAAGCGACAGGT...GTTCTTCTGAGTGCAGCTGAAGCAGCAGAGGTGATTCTGCGTGTGGACAACATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550010.5 |
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| CDS-3UTR GCA 90 bp | CTTCACTTGAAAACTTTCTGTTATACCCAGGATAGCCATATCTCCAATGGTGCCCAACAGCGCCTCTCTTaGAGCCTTCGTGGCTTCTCT | + |
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Preference number: 4 (lower is better) Translates to: LHLKTFCYTQDSHISNGAQQRLS*SLRGFS Trigger: AGAGAAGCCACGAAGGCTGCAAGAGAGGCGCTGTTG...GGCACCATTGGAGATATGGCTATCCTGGGTATAACAGAAAGTTTTCAAGTGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000550010.5 |
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| CDS-3UTR GCA 90 bp | GAATCACCTCTGCTGCTTCAGCTGCACTCAGAAGAACCTGTCGCTTCACTTGAATGCACTGTCATAGCCTaGATTGTCAGCTATGATGGT | + |
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Preference number: 4 (lower is better) Translates to: ESPLLLQLHSEEPVASLECTVIA*IVSYDG Trigger: ACCATCATAGCTGACAATGCAGGCTATGACAGTGCA...TTCAAGTGAAGCGACAGGTTCTTCTGAGTGCAGCTGAAGCAGCAGAGGTGATTC 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550010.5 |
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| CDS-3UTR TCA 90 bp | GAATCACCTCTGCTGCTTCAGCTGCACTCAGAAGAACCTGTCGCTTCACTTGAACCCCAGAAAAGTGAATaGGTTTGTCTTCTCCAATCA | + |
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Preference number: 4 (lower is better) Translates to: ESPLLLQLHSEEPVASLEPQKSE*VCLLQS Trigger: TGATTGGAGAAGACAAACTCATTCACTTTTCTGGGG...TTCAAGTGAAGCGACAGGTTCTTCTGAGTGCAGCTGAAGCAGCAGAGGTGATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000550010.5 |
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| CDS-3UTR GCA 90 bp | CACCTCTGCTGCTTCAGCTGCACTCAGAAGAACCTGTCGCTTCACTTGAAAACTCTCTTCATCAGCTCCTaGCTTAAAGATGTTAACAGG | + |
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Preference number: 4 (lower is better) Translates to: HLCCFSCTQKNLSLHLKTLFISS*LKDVNR Trigger: CCTGTTAACATCTTTAAGGCAGGAGCTGATGAAGAG...AGTTTTCAAGTGAAGCGACAGGTTCTTCTGAGTGCAGCTGAAGCAGCAGAGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000550010.5 |
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| CDS-3UTR GCA 90 bp | GAATCACCTCTGCTGCTTCAGCTGCACTCAGAAGAACCTGTCGCTTCACTTGAACGCATGTTCTATTTCTaGAACCTTTGCTGTAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: ESPLLLQLHSEEPVASLERMFYF*NLCCRV Trigger: GACTCTACAGCAAAGGTTGCAGAAATAGAACATGCG...TTCAAGTGAAGCGACAGGTTCTTCTGAGTGCAGCTGAAGCAGCAGAGGTGATTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550010.5 |
||
| CDS-3UTR CCA 90 bp | TGTTGTCCACACGCAGAATCACCTCTGCTGCTTCAGCTGCACTCAGAAGAACCTCTAAAATTTGTTGAGTaGCACCACGCAAAACAATGG | + |
|
Preference number: 4 (lower is better) Translates to: CCPHAESPLLLQLHSEEPLKFVE*HHAKQW Trigger: CCATTGTTTTGCGTGGTGCCACTCAACAAATTTTAG...AGGTTCTTCTGAGTGCAGCTGAAGCAGCAGAGGTGATTCTGCGTGTGGACAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000550010.5 |
||
| CDS-3UTR GCA 90 bp | CGCTTTGATGATGTTGTCCACACGCAGAATCACCTCTGCTGCTTCAGCTGCACTTATTTCTGCAACCTTTaGTGTAGAGTCAACTCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: RFDDVVHTQNHLCCFSCTYFCNL*CRVNSY Trigger: GTAAGAGTTGACTCTACAGCAAAGGTTGCAGAAATA...AGTGCAGCTGAAGCAGCAGAGGTGATTCTGCGTGTGGACAACATCATCAAAGCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550010.5 |
||
| CDS-3UTR CCA 90 bp | CACTTGAAAACTTTCTGTTATACCCAGGATAGCCATATCTCCAATGGTGCCTTCAAGCTTCACCAGTTCTaGGTGATCAAAGGTAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: HLKTFCYTQDSHISNGAFKLHQF*VIKGRG Trigger: GCCTCTACCTTTGATCACCCAGAACTGGTGAAGCTT...GAAGGCACCATTGGAGATATGGCTATCCTGGGTATAACAGAAAGTTTTCAAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000550010.5 |
||
| 3UTR CAA 72 bp | TGCTTCAGCTGCACTCAGAAGAACCTGTCGCTTCACTaGAAAACTTTCTGTTATACCCAGGATAGCCATATC | + |
|
Preference number: 4 (lower is better) Translates to: CFSCTQKNLSLH*KTFCYTQDSHI Trigger: GATATGGCTATCCTGGGTATAACAGAAAGTTTTCAAGTGAAGCGACAGGTTCTTCTGAGTGCAGCTGAAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000550010.5 |
||
| CDS-3UTR TCA 90 bp | CTTCACTTGAAAACTTTCTGTTATACCCAGGATAGCCATATCTCCAATGGTGCCACTTCATCGGAACCATaGTCAACTGCAGAACTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: LHLKTFCYTQDSHISNGATSSEP*STAELN Trigger: GTTGAGTTCTGCAGTTGATCATGGTTCCGATGAAGT...GGCACCATTGGAGATATGGCTATCCTGGGTATAACAGAAAGTTTTCAAGTGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000550010.5 |
||
| CDS-3UTR TCA 90 bp | CTTCACTTGAAAACTTTCTGTTATACCCAGGATAGCCATATCTCCAATGGTGCCTTCACCAGTTCTGGGTaGTCAAAGGTAGAGGCAATT | + |
|
Preference number: 4 (lower is better) Translates to: LHLKTFCYTQDSHISNGAFTSSG*SKVEAI Trigger: AATTGCCTCTACCTTTGATCACCCAGAACTGGTGAA...GGCACCATTGGAGATATGGCTATCCTGGGTATAACAGAAAGTTTTCAAGTGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000550010.5 |
||
| CDS-3UTR GCA 90 bp | CACTTGAAAACTTTCTGTTATACCCAGGATAGCCATATCTCCAATGGTGCCTTCAAAGATGTTAACAGGTaGAAGGGAAAGGGACGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: HLKTFCYTQDSHISNGAFKDVNR*KGKGRH Trigger: ATGGCGTCCCTTTCCCTTGCACCTGTTAACATCTTT...GAAGGCACCATTGGAGATATGGCTATCCTGGGTATAACAGAAAGTTTTCAAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000550010.5 |
||
| CDS-3UTR CCA 90 bp | CACTTGAAAACTTTCTGTTATACCCAGGATAGCCATATCTCCAATGGTGCCTTCTATCCAATCCAGCAGTaGTATTGCCTTCACTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: HLKTFCYTQDSHISNGAFYPIQQ*YCLHCE Trigger: CTCACAGTGAAGGCAATACCACTGCTGGATTGGATA...GAAGGCACCATTGGAGATATGGCTATCCTGGGTATAACAGAAAGTTTTCAAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000550010.5 |
||
| CDS-3UTR CCA 90 bp | CACTTGAAAACTTTCTGTTATACCCAGGATAGCCATATCTCCAATGGTGCCTTCAACTTTGCTAGAAACTaGTCCAAAGATCGACAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: HLKTFCYTQDSHISNGAFNFARN*SKDRQH Trigger: GTGCTGTCGATCTTTGGACCAGTTTCTAGCAAAGTT...GAAGGCACCATTGGAGATATGGCTATCCTGGGTATAACAGAAAGTTTTCAAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000550010.5 |
||
| CDS-3UTR GCA 90 bp | TGCTTCAGCTGCACTCAGAAGAACCTGTCGCTTCACTTGAAAACTTTCTGTTATACACAAAGAGCATCATaGAATGATCTTTCTGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: CFSCTQKNLSLHLKTFCYTQRAS*NDLSAS Trigger: TGAAGCAGAAAGATCATTGCATGATGCTCTTTGTGT...ATAACAGAAAGTTTTCAAGTGAAGCGACAGGTTCTTCTGAGTGCAGCTGAAGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000550010.5 |
||
| CDS GCA 90 bp | CTAAGAATGAGGCAGGGAGGGGTTGCAGGCCATCAAGGTGACGCCTaGCGGGCGGGCGAGGGAACGCGGCCTCCATCTTCCACCCTCGGA | + |
|
Preference number: 5 (lower is better) Translates to: LRMRQGGVAGHQGDA*RAGEGTRPPSSTLG Trigger: TCCGAGGGTGGAAGATGGAGGCCGCGTTCCCTCGCCCGCCCGGCAGGCGTCACCTTGATGGCCTGCAACCCCTCCCTGCCTCATTCTTAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000543146.2 ENST00000551899.5 |
||
| CDS CCA 90 bp | CCTGGGCTGCCGGGACTATGCAAAGACCTAGGCACAAGGAGACGCTaGCTTTGCGGTCCACCCCTCCCCCTCGTGGTGAGCTCCACCGGC | + |
|
Preference number: 5 (lower is better) Translates to: PGLPGLCKDLGTRRR*LCGPPLPLVVSSTG Trigger: GCCGGTGGAGCTCACCACGAGGGGGAGGGGTGGACCGCAAAGCCAGCGTCTCCTTGTGCCTAGGTCTTTGCATAGTCCCGGCAGCCCAGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000543146.2 |
||
| CDS GCA 90 bp | CTGCCGGGACTATGCAAAGACCTAGGCACAAGGAGACGCTGGCTTTaGGGTCCACCCCTCCCCCTCGTGGTGAGCTCCACCGGCTGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: LPGLCKDLGTRRRWL*GPPLPLVVSSTGWP Trigger: AGGCCAGCCGGTGGAGCTCACCACGAGGGGGAGGGGTGGACCGCAAAGCCAGCGTCTCCTTGTGCCTAGGTCTTTGCATAGTCCCGGCAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000543146.2 |
||
| CDS GCA 90 bp | ATTTCTTCGCTCCGGGTGAGGCGCGGACCTGGGCTGCCGGGACTATaGAAAGACCTAGGCACAAGGAGACGCTGGCTTTGCGGTCCACCC | + |
|
Preference number: 5 (lower is better) Translates to: ISSLRVRRGPGLPGL*KDLGTRRRWLCGPP Trigger: GGGTGGACCGCAAAGCCAGCGTCTCCTTGTGCCTAGGTCTTTGCATAGTCCCGGCAGCCCAGGTCCGCGCCTCACCCGGAGCGAAGAAAT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000543146.2 |
||
| CDS CCA 90 bp | GGGTCCCACACTAGAAATTTCTTCGCTCCGGGTGAGGCGCGGACCTaGGCTGCCGGGACTATGCAAAGACCTAGGCACAAGGAGACGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GSHTRNFFAPGEART*AAGTMQRPRHKETL Trigger: CAGCGTCTCCTTGTGCCTAGGTCTTTGCATAGTCCCGGCAGCCCAGGTCCGCGCCTCACCCGGAGCGAAGAAATTTCTAGTGTGGGACCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000543146.2 |
||
| CDS CCA 90 bp | GGGTCCCACACTAGAAATTTCTTCGCTCCGGGTGAGGCGCGGACCTaGGCTGCCGGGACTATGCAAAGACCATGGTTCCGAGGAGTTCCG | + |
|
Preference number: 5 (lower is better) Translates to: GSHTRNFFAPGEART*AAGTMQRPWFRGVP Trigger: CGGAACTCCTCGGAACCATGGTCTTTGCATAGTCCCGGCAGCCCAGGTCCGCGCCTCACCCGGAGCGAAGAAATTTCTAGTGTGGGACCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000551899.5 |
||
| CDS TCA 90 bp | GCAAGGGAAAGGGACGCCATGGTTCCGAGGAGTTCCGCACACAAGTaGATCCCCTCACAGCTCGTGCTCGGGACCAGCGGACTGAAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: ARERDAMVPRSSAHK*IPSQLVLGTSGLKE Trigger: TTCCTTCAGTCCGCTGGTCCCGAGCACGAGCTGTGAGGGGATTCACTTGTGTGCGGAACTCCTCGGAACCATGGCGTCCCTTTCCCTTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546859.5 |
||
| CDS-3UTR CAA 90 bp | CCTGGGTGCCGCTTTGATGATGTTGTCCACACGCAGAATCACCTCTGCTGCTTCTCAACAGCGCCTCTCTaGCAGCCTTCGTGGCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: PGCRFDDVVHTQNHLCCFSTAPL*QPSWLL Trigger: GAGAAGCCACGAAGGCTGCAAGAGAGGCGCTGTTGA...GAAGCAGCAGAGGTGATTCTGCGTGTGGACAACATCATCAAAGCGGCACCCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550010.5 |
||
| CDS TCA 90 bp | CGTTTCCCAATCCAGCAGTGGTATTGCCTTCACTGTGAGCAGCCCTaGGCTGTGCCACCAGGTCTGCACTGTCATAGCCTGCATTGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: RFPIQQWYCLHCEQP*AVPPGLHCHSLHCQ Trigger: CTGACAATGCAGGCTATGACAGTGCAGACCTGGTGGCACAGCTCAGGGCTGCTCACAGTGAAGGCAATACCACTGCTGGATTGGGAAACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000544368.6 |
||
| CDS GCA 90 bp | GGTATTGCCTTCACTGTGAGCAGCCCTGAGCTGTGCCACCAGGTCTaGACTGTCATAGCCTGCATTGTCAGCTATGATGGTTGGCAACTC | + |
|
Preference number: 5 (lower is better) Translates to: GIAFTVSSPELCHQV*TVIACIVSYDGWQL Trigger: GAGTTGCCAACCATCATAGCTGACAATGCAGGCTATGACAGTGCAGACCTGGTGGCACAGCTCAGGGCTGCTCACAGTGAAGGCAATACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550010.5 |
||
| CDS TCA 90 bp | TCATATCCAATCCAGCAGTGGTATTGCCTTCACTGTGAGCAGCCCTaGGCTGTGCCACCAGGTCTGCACTGTCATAGCCTGCATTGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: SYPIQQWYCLHCEQP*AVPPGLHCHSLHCQ Trigger: CTGACAATGCAGGCTATGACAGTGCAGACCTGGTGGCACAGCTCAGGGCTGCTCACAGTGAAGGCAATACCACTGCTGGATTGGATATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000299300.11 ENST00000543146.2 ENST00000550010.5 |
||
| CDS GCA 90 bp | GGTATTGCCTTCACTGTGAGCAGCCCTGAGCTGTGCCACCAGGTCTaGACTGTCATAGCCTGCATTGTCAGCTATGATGGTTGGCAACAT | + |
|
Preference number: 5 (lower is better) Translates to: GIAFTVSSPELCHQV*TVIACIVSYDGWQH Trigger: ATGTTGCCAACCATCATAGCTGACAATGCAGGCTATGACAGTGCAGACCTGGTGGCACAGCTCAGGGCTGCTCACAGTGAAGGCAATACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000299300.11 ENST00000543146.2 ENST00000544368.6 |
||
| CDS-3UTR CAA 90 bp | GGTGCCTTCCCTCATATCCAATCCAGCAGTGGTATTGCCTTCACTGTGAGCAGCGCCGCTTTGATGATGTaGTCCACACGCAGAATCACC | + |
|
Preference number: 5 (lower is better) Translates to: GAFPHIQSSSGIAFTVSSAALMM*STRRIT Trigger: GGTGATTCTGCGTGTGGACAACATCATCAAAGCGGC...GCTGCTCACAGTGAAGGCAATACCACTGCTGGATTGGATATGAGGGAAGGCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550010.5 |
||
| CDS-3UTR CAA 90 bp | CGCTTTGATGATGTTGTCCACACGCAGAATCACCTCTGCTGCTTCAGCTGCACTTTCCTGGGTGCCGCTTaGATGATGTTGTCCACACGC | + |
|
Preference number: 5 (lower is better) Translates to: RFDDVVHTQNHLCCFSCTFLGAA*MMLSTR Trigger: GCGTGTGGACAACATCATCAAAGCGGCACCCAGGAA...AGTGCAGCTGAAGCAGCAGAGGTGATTCTGCGTGTGGACAACATCATCAAAGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550010.5 |
||
| CDS GCA 90 bp | CCACCTGTGACAAGAGCTAGGCGTTCCACACCTGCAAAATCTGCATaGTCAATAGCCATGACACCAGCAGCACCAAAGAGCTGTTCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: PPVTRARRSTPAKSA*SIAMTPAAPKSCSG Trigger: TCCTGAACAGCTCTTTGGTGCTGCTGGTGTCATGGCTATTGAGCATGCAGATTTTGCAGGTGTGGAACGCCTAGCTCTTGTCACAGGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000299300.11 ENST00000543146.2 ENST00000544368.6 ENST00000550010.5 ENST00000553169.1 |
||
| CDS-3UTR CAA 90 bp | GGGTGCCGCTTTGATGATGTTGTCCACACGCAGAATCACCTCTGCTGCTTCAGCCTGCTTAGAAGAATTTaGTCCATGCCTTTGGGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: GCRFDDVVHTQNHLCCFSLLRRI*SMPLGP Trigger: GGGACCCAAAGGCATGGACAAAATTCTTCTAAGCAG...GCTGAAGCAGCAGAGGTGATTCTGCGTGTGGACAACATCATCAAAGCGGCACCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550010.5 |
||
| CDS-3UTR CAA 90 bp | GGGTGCCGCTTTGATGATGTTGTCCACACGCAGAATCACCTCTGCTGCTTCAGCACTTCCTCGATAAGTTaGCAACTTCCAAGCTTCACC | + |
|
Preference number: 5 (lower is better) Translates to: GCRFDDVVHTQNHLCCFSTSSIS*QLPSFT Trigger: GGTGAAGCTTGGAAGTTGCAAACTTATCGAGGAAGT...GCTGAAGCAGCAGAGGTGATTCTGCGTGTGGACAACATCATCAAAGCGGCACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550010.5 |
||
| CDS-3UTR CAA 90 bp | CGTTTCCTGGGTGCCGCTTTGATGATGTTGTCCACACGCAGAATCACCTCTGCTAGAGTCCTTTACAGTTaGCGCAAGAACACAAAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: RFLGAALMMLSTRRITSARVLYS*RKNTKS Trigger: GCTCTTTGTGTTCTTGCGCAAACTGTAAAGGACTCT...AGCAGAGGTGATTCTGCGTGTGGACAACATCATCAAAGCGGCACCCAGGAAACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550010.5 |
||
| CDS-3UTR CAA 90 bp | GAATCACCTCTGCTGCTTCAGCTGCACTCAGAAGAACCTGTCGCTTCACTTGAAATTTTGTCCATGCCTTaGGGTCCCAAGGTGCTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: ESPLLLQLHSEEPVASLEILSMP*GPKVLF Trigger: AAAGAGCACCTTGGGACCCAAAGGCATGGACAAAAT...TTCAAGTGAAGCGACAGGTTCTTCTGAGTGCAGCTGAAGCAGCAGAGGTGATTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000550010.5 |
||
| CDS-3UTR CAA 90 bp | GATGTTGTCCACACGCAGAATCACCTCTGCTGCTTCAGCTGCACTCAGAAGAACATAGTGGCACCATCATaGGTTACCATAAGAGAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: DVVHTQNHLCCFSCTQKNIVAPS*VTIREA Trigger: TGCCTCTCTTATGGTAACCAATGATGGTGCCACTAT...GTTCTTCTGAGTGCAGCTGAAGCAGCAGAGGTGATTCTGCGTGTGGACAACATC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550010.5 |
||
| CDS-3UTR CAA 90 bp | GGTGCCTTCCCTCATATCCAATCCAGCAGTGGTATTGCCTTCACTGTGAGCAGCAACCTGTCGCTTCACTaGAAAACTTTCTGTTATACC | + |
|
Preference number: 5 (lower is better) Translates to: GAFPHIQSSSGIAFTVSSNLSLH*KTFCYT Trigger: GGTATAACAGAAAGTTTTCAAGTGAAGCGACAGGTT...GCTGCTCACAGTGAAGGCAATACCACTGCTGGATTGGATATGAGGGAAGGCACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000550010.5 |
||
| CDS TCA 90 bp | TGGCTATCTCTGGAGGCTGATGTAGGTTTGACTGTTGGAGTGGGGTaGGGCAGCAAGATGATCTTTGTGTATGCTTTTCAGTGTCCTATA | + |
|
Preference number: 5 (lower is better) Translates to: WLSLEADVGLTVGVG*GSKMIFVYAFQCPI Trigger: TATAGGACACTGAAAAGCATACACAAAGATCATCTTGCTGCCTCACCCCACTCCAACAGTCAAACCTACATCAGCCTCCAGAGATAGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000550638.5 |
||
| CDS CCA 90 bp | TCTCAGTGCTTTAGCATAAGACTCCATTGCAACAGCTTCTTTGCCTaGTGTTCTATTGGCAAGCTGTGTCACAGCATGAGCCATCAACAT | + |
|
Preference number: 5 (lower is better) Translates to: SQCFSIRLHCNSFFA*CSIGKLCHSMSHQH Trigger: ATGTTGATGGCTCATGCTGTGACACAGCTTGCCAATAGAACACCAGGCAAAGAAGCTGTTGCAATGGAGTCTTATGCTAAAGCACTGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000299300.11 ENST00000543146.2 ENST00000544368.6 |
||
| CDS TCA 90 bp | CAAAGAGCATCATGCAATGATCTTTCTGCTTCATCTAAAATTTGTTaGGTGGCACCACGCAAAACAATGGTACAAGCCTCACCAAGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: QRASCNDLSASSKIC*VAPRKTMVQASPRA Trigger: TGCCCTTGGTGAGGCTTGTACCATTGTTTTGCGTGGTGCCACTCAACAAATTTTAGATGAAGCAGAAAGATCATTGCATGATGCTCTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000299300.11 ENST00000543146.2 ENST00000544368.6 ENST00000550010.5 |
||
| CDS-3UTR CAA 90 bp | CACTTGAAAACTTTCTGTTATACCCAGGATAGCCATATCTCCAATGGTGCCTTCGTTTTGAGGATAATGTaGTGCCCGCAATATTCATTA | + |
|
Preference number: 5 (lower is better) Translates to: HLKTFCYTQDSHISNGAFVLRIM*CPQYSL Trigger: TAATGAATATTGCGGGCACAACATTATCCTCAAAAC...GAAGGCACCATTGGAGATATGGCTATCCTGGGTATAACAGAAAGTTTTCAAGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000550010.5 |
||
| CDS GCA 72 bp | AGGCAGGGAGGGGTTGCAGGCCATCAAGGTGACGCCTaGCGGGCGGGCGAGGGAACGCGGCCTCCATCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: RQGGVAGHQGDA*RAGEGTRPPSS Trigger: GGAAGATGGAGGCCGCGTTCCCTCGCCCGCCCGGCAGGCGTCACCTTGATGGCCTGCAACCCCTCCCTGCCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000543146.2 ENST00000551899.5 |
||
| CDS CAA 90 bp | GCTGCCGGGACTATGCAAAGACCTAGGCACAAGGAGACGCTGGCTTaGCGGTCCACCCCTCCCCCTCGTGGTGAGCTCCACCGGCTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: AAGTMQRPRHKETLA*RSTPPPRGELHRLA Trigger: GGCCAGCCGGTGGAGCTCACCACGAGGGGGAGGGGTGGACCGCAAAGCCAGCGTCTCCTTGTGCCTAGGTCTTTGCATAGTCCCGGCAGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000543146.2 |
||
| CDS CCA 72 bp | CCGGGACTATGCAAAGACCTAGGCACAAGGAGACGCTaGCTTTGCGGTCCACCCCTCCCCCTCGTGGTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: PGLCKDLGTRRR*LCGPPLPLVVS Trigger: GCTCACCACGAGGGGGAGGGGTGGACCGCAAAGCCAGCGTCTCCTTGTGCCTAGGTCTTTGCATAGTCCCGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000543146.2 |
||
| CDS TCA 72 bp | AGGGACGCCATGGTTCCGAGGAGTTCCGCACACAAGTaGATCCCCTCACAGCTCGTGCTCGGGACCAGCGGA | + |
|
Preference number: 6 (lower is better) Translates to: RDAMVPRSSAHK*IPSQLVLGTSG Trigger: TCCGCTGGTCCCGAGCACGAGCTGTGAGGGGATTCACTTGTGTGCGGAACTCCTCGGAACCATGGCGTCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000299300.11 ENST00000544368.6 ENST00000546859.5 ENST00000549933.5 ENST00000550455.5 ENST00000550638.5 ENST00000551620.5 |
||
| CDS CAA 72 bp | ACTATGCAAAGACCTAGGCACAAGGAGACGCTGGCTTaGCGGTCCACCCCTCCCCCTCGTGGTGAGCTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: TMQRPRHKETLA*RSTPPPRGELH Trigger: GTGGAGCTCACCACGAGGGGGAGGGGTGGACCGCAAAGCCAGCGTCTCCTTGTGCCTAGGTCTTTGCATAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000543146.2 |
||
| CDS TCA 72 bp | GCAAAGACCATGGTTCCGAGGAGTTCCGCACACAAGTaGATCCCCTCACAGCTCGTGCTCGGGACCAGCGGA | + |
|
Preference number: 6 (lower is better) Translates to: AKTMVPRSSAHK*IPSQLVLGTSG Trigger: TCCGCTGGTCCCGAGCACGAGCTGTGAGGGGATTCACTTGTGTGCGGAACTCCTCGGAACCATGGTCTTTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000551899.5 |
||
| CDS TCA 72 bp | CAGGGTTTCACCATCTCACATTGGTCAGTCTGGCCTTaGACTCCTGACCTTGTGATCCGCCCGCCTGGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: QGFTISHWSVWP*TPDLVIRPPGL Trigger: GAGGCCAGGCGGGCGGATCACAAGGTCAGGAGTTCAAGGCCAGACTGACCAATGTGAGATGGTGAAACCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553169.1 |
||
| CDS CCA 72 bp | ACTAGAAATTTCTTCGCTCCGGGTGAGGCGCGGACCTaGGCTGCCGGGACTATGCAAAGACCTAGGCACAAG | + |
|
Preference number: 6 (lower is better) Translates to: TRNFFAPGEART*AAGTMQRPRHK Trigger: CTTGTGCCTAGGTCTTTGCATAGTCCCGGCAGCCCAGGTCCGCGCCTCACCCGGAGCGAAGAAATTTCTAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000543146.2 |
||
| CDS CCA 72 bp | ACTAGAAATTTCTTCGCTCCGGGTGAGGCGCGGACCTaGGCTGCCGGGACTATGCAAAGACCATGGTTCCGA | + |
|
Preference number: 6 (lower is better) Translates to: TRNFFAPGEART*AAGTMQRPWFR Trigger: TCGGAACCATGGTCTTTGCATAGTCCCGGCAGCCCAGGTCCGCGCCTCACCCGGAGCGAAGAAATTTCTAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000551899.5 |
||
| CDS GCA 72 bp | TTCACTGTGAGCAGCCCTGAGCTGTGCCACCAGGTCTaGACTGTCATAGCCTGCATTGTCAGCTATGATGGT | + |
|
Preference number: 6 (lower is better) Translates to: FTVSSPELCHQV*TVIACIVSYDG Trigger: ACCATCATAGCTGACAATGCAGGCTATGACAGTGCAGACCTGGTGGCACAGCTCAGGGCTGCTCACAGTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000299300.11 ENST00000543146.2 ENST00000544368.6 ENST00000550010.5 |
||
| CDS GCA 72 bp | CCTGAGCTGTGCCACCAGGTCTGCACTGTCATAGCCTaGATTGTCAGCTATGATGGTTGGCAACTCCTCCAT | + |
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Preference number: 6 (lower is better) Translates to: PELCHQVCTVIA*IVSYDGWQLLH Trigger: ATGGAGGAGTTGCCAACCATCATAGCTGACAATGCAGGCTATGACAGTGCAGACCTGGTGGCACAGCTCAGG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550010.5 |
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| CDS GCA 72 bp | CCCATGATCAACTGCAGAACTCAACAGCGCCTCTCTTaGAGCCTTCGTGGCTTCTCTCCAACCCGCTATGAT | + |
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Preference number: 6 (lower is better) Translates to: PMINCRTQQRLS*SLRGFSPTRYD Trigger: ATCATAGCGGGTTGGAGAGAAGCCACGAAGGCTGCAAGAGAGGCGCTGTTGAGTTCTGCAGTTGATCATGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550638.5 |
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| CDS GCA 72 bp | ACCATGATCAACTGCAGAACTCAACAGCGCCTCTCTTaGAGCCTTCGTGGCTTCTCTCCAACCCGCTATGAT | + |
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Preference number: 6 (lower is better) Translates to: TMINCRTQQRLS*SLRGFSPTRYD Trigger: ATCATAGCGGGTTGGAGAGAAGCCACGAAGGCTGCAAGAGAGGCGCTGTTGAGTTCTGCAGTTGATCATGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000299300.11 ENST00000543146.2 ENST00000544368.6 ENST00000550010.5 ENST00000551620.5 |
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| CDS GCA 72 bp | CCTGAGCTGTGCCACCAGGTCTGCACTGTCATAGCCTaGATTGTCAGCTATGATGGTTGGCAACATTCTCAG | + |
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Preference number: 6 (lower is better) Translates to: PELCHQVCTVIA*IVSYDGWQHSQ Trigger: CTGAGAATGTTGCCAACCATCATAGCTGACAATGCAGGCTATGACAGTGCAGACCTGGTGGCACAGCTCAGG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000299300.11 ENST00000543146.2 ENST00000544368.6 |
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| CDS GCA 72 bp | CTCTTCATCAGCTCCTGCCTTAAAGATGTTAACAGGTaGAAGGGAAAGGGACGCCATGGTTCCGAGGAGTTC | + |
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Preference number: 6 (lower is better) Translates to: LFISSCLKDVNR*KGKGRHGSEEF Trigger: GAACTCCTCGGAACCATGGCGTCCCTTTCCCTTGCACCTGTTAACATCTTTAAGGCAGGAGCTGATGAAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000299300.11 ENST00000544368.6 ENST00000546859.5 ENST00000549933.5 ENST00000550010.5 ENST00000550455.5 ENST00000550638.5 ENST00000551620.5 |
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| CDS GCA 72 bp | ACAAGAGCTAGGCGTTCCACACCTGCAAAATCTGCATaGTCAATAGCCATGACACCAGCAGCACCAAAGAGC | + |
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Preference number: 6 (lower is better) Translates to: TRARRSTPAKSA*SIAMTPAAPKS Trigger: GCTCTTTGGTGCTGCTGGTGTCATGGCTATTGAGCATGCAGATTTTGCAGGTGTGGAACGCCTAGCTCTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000299300.11 ENST00000543146.2 ENST00000544368.6 ENST00000550010.5 ENST00000553169.1 |
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| CDS TCA 72 bp | CTGGAGGCTGATGTAGGTTTGACTGTTGGAGTGGGGTaGGGCAGCAAGATGATCTTTGTGTATGCTTTTCAG | + |
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Preference number: 6 (lower is better) Translates to: LEADVGLTVGVG*GSKMIFVYAFQ Trigger: CTGAAAAGCATACACAAAGATCATCTTGCTGCCTCACCCCACTCCAACAGTCAAACCTACATCAGCCTCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000550638.5 |
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| CDS GCA 72 bp | CTCTTCATCAGCTCCTGCCTTAAAGATGTTAACAGGTaGAAGGGAAAGGGACGCAGCGAGACTAAAGACGAT | + |
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Preference number: 6 (lower is better) Translates to: LFISSCLKDVNR*KGKGRSETKDD Trigger: ATCGTCTTTAGTCTCGCTGCGTCCCTTTCCCTTGCACCTGTTAACATCTTTAAGGCAGGAGCTGATGAAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000543146.2 ENST00000551899.5 |
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| CDS TCA 72 bp | ATGGTACAAGCCTCACCAAGGGCAACCCCAGAAAAGTaGATGAGTTTGTCTTCTCCAATCATGACTTCCTCG | + |
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Preference number: 6 (lower is better) Translates to: MVQASPRATPEK*MSLSSPIMTSS Trigger: CGAGGAAGTCATGATTGGAGAAGACAAACTCATTCACTTTTCTGGGGTTGCCCTTGGTGAGGCTTGTACCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000299300.11 ENST00000543146.2 ENST00000544368.6 ENST00000550010.5 |
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| CDS GCA 72 bp | TTAGAAGAATTTTGTCCATGCCTTTGGGTCCCAAGGTaGTCTTTACCAAGTCTCCAATGGCGATGGCACCAA | + |
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Preference number: 6 (lower is better) Translates to: LEEFCPCLWVPR*SLPSLQWRWHQ Trigger: TTGGTGCCATCGCCATTGGAGACTTGGTAAAGAGCACCTTGGGACCCAAAGGCATGGACAAAATTCTTCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000299300.11 ENST00000543146.2 ENST00000544368.6 ENST00000546859.5 ENST00000550010.5 ENST00000550455.5 ENST00000550638.5 ENST00000551620.5 |
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| CDS CCA 72 bp | ACTCCATTGCAACAGCTTCTTTGCCTGGTGTTCTATTaGCAAGCTGTGTCACAGCATGAGCCATCAACATCT | + |
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Preference number: 6 (lower is better) Translates to: TPLQQLLCLVFY*QAVSQHEPSTS Trigger: AGATGTTGATGGCTCATGCTGTGACACAGCTTGCCAATAGAACACCAGGCAAAGAAGCTGTTGCAATGGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000299300.11 ENST00000543146.2 ENST00000544368.6 |
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| CDS CCA 72 bp | TTTAGCATAAGACTCCATTGCAACAGCTTCTTTGCCTaGTGTTCTATTGGCAAGCTGTGTCACAGCATGAGC | + |
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Preference number: 6 (lower is better) Translates to: FSIRLHCNSFFA*CSIGKLCHSMS Trigger: GCTCATGCTGTGACACAGCTTGCCAATAGAACACCAGGCAAAGAAGCTGTTGCAATGGAGTCTTATGCTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000299300.11 ENST00000543146.2 ENST00000544368.6 |
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| CDS TCA 72 bp | ATAAGTTTGCAACTTCCAAGCTTCACCAGTTCTGGGTaGTCAAAGGTAGAGGCAATTTCACCACCTGTGACA | + |
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Preference number: 6 (lower is better) Translates to: ISLQLPSFTSSG*SKVEAISPPVT Trigger: TGTCACAGGTGGTGAAATTGCCTCTACCTTTGATCACCCAGAACTGGTGAAGCTTGGAAGTTGCAAACTTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000299300.11 ENST00000543146.2 ENST00000544368.6 ENST00000550010.5 ENST00000553169.1 |
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| CDS TCA 72 bp | ATGTTTAGAACAGTAGTACTTTGCTATACAAACCCATaGTCAACTGCAGAACTCAACAGCGCCTCTCTTGCA | + |
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Preference number: 6 (lower is better) Translates to: MFRTVVLCYTNP*STAELNSASLA Trigger: TGCAAGAGAGGCGCTGTTGAGTTCTGCAGTTGATCATGGGTTTGTATAGCAAAGTACTACTGTTCTAAACAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550638.5 |
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| CDS TCA 72 bp | TCATGCAATGATCTTTCTGCTTCATCTAAAATTTGTTaGGTGGCACCACGCAAAACAATGGTACAAGCCTCA | + |
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Preference number: 6 (lower is better) Translates to: SCNDLSASSKIC*VAPRKTMVQAS Trigger: TGAGGCTTGTACCATTGTTTTGCGTGGTGCCACTCAACAAATTTTAGATGAAGCAGAAAGATCATTGCATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000299300.11 ENST00000543146.2 ENST00000544368.6 ENST00000550010.5 |
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| CDS GCA 72 bp | TTTTTCCTTTTCCGCATGTTCTATTTCTGCAACCTTTaGTGTAGAGTCAACTCTTACCCGGGAACCAAATAT | + |
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Preference number: 6 (lower is better) Translates to: FFLFRMFYFCNL*CRVNSYPGTKY Trigger: ATATTTGGTTCCCGGGTAAGAGTTGACTCTACAGCAAAGGTTGCAGAAATAGAACATGCGGAAAAGGAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000299300.11 ENST00000543146.2 ENST00000544368.6 ENST00000548787.1 ENST00000550010.5 ENST00000553169.1 |
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| CDS TCA 72 bp | GAGGATAATGTTGTGCCCGCAATATTCATTAAATCTTaGCGGAATTTAACTTCATCGGAACTAAATAAAACC | + |
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Preference number: 6 (lower is better) Translates to: EDNVVPAIFIKS*RNLTSSELNKT Trigger: GGTTTTATTTAGTTCCGATGAAGTTAAATTCCGTCAAGATTTAATGAATATTGCGGGCACAACATTATCCTC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000548787.1 |
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