Pregenerated sensors for CCNYL1 (Homo sapiens)
Ensembl gene IDs: ENSG00000163249Ensembl transcript IDs: ENST00000295414.8, ENST00000339882.9, ENST00000420822.1
Found 12 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGTTGGAGTGTAGTAGCTATTCCTATAGGCACCATCATGGTACACTaGAGCCTCCAATACTTGACCTCAAGCAATCCTCCAGCCTCAGCC | + |
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Preference number: 1 (lower is better) Translates to: GWSVVAIPIGTIMVH*SLQYLTSSNPPASA Trigger: GGCTGAGGCTGGAGGATTGCTTGAGGTCAAGTATTGGAGGCTGCAGTGTACCATGATGGTGCCTATAGGAATAGCTACTACACTCCAACC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000295414.8 ENST00000339882.9 |
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| 3UTR-3UTR CCA 90 bp | CCTTCCCTCTTGCCAGCTTCTAATATTCCTCTGTCCAGTGCATTCTCAGCTTCATGGAGCCAGGCAAGATaGCACACGCCCGTGGTCCCA | + |
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Preference number: 2 (lower is better) Translates to: PSLLPASNIPLSSAFSASWSQAR*HTPVVP Trigger: TGGGACCACGGGCGTGTGCCATCTTGCCTGGCTCCA...TGAAGCTGAGAATGCACTGGACAGAGGAATATTAGAAGCTGGCAAGAGGGAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000420822.1 |
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| 3UTR-3UTR CCA 90 bp | CCTTCCCTCTTGCCAGCTTCTAATATTCCTCTGTCCAGTGCATTCTCAGCTTCATGTATAGACATAAGATaGAGCCAGGCAAGATGGCAC | + |
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Preference number: 2 (lower is better) Translates to: PSLLPASNIPLSSAFSASCIDIR*SQARWH Trigger: GTGCCATCTTGCCTGGCTCCATCTTATGTCTATACA...TGAAGCTGAGAATGCACTGGACAGAGGAATATTAGAAGCTGGCAAGAGGGAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000420822.1 |
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| CDS-3UTR GCA 90 bp | GAATGTATAGACATAAGATGGAGCCAGGCAAGATGGCACACGCCCGTGGTCCCAGCCTCCGCTCCTCTCTaGCACCGCCTTCGCTCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: ECIDIRWSQARWHTPVVPASAPL*HRLRSP Trigger: GGGCGAGCGAAGGCGGTGGCAGAGAGGAGCGGAGGC...TGGGACCACGGGCGTGTGCCATCTTGCCTGGCTCCATCTTATGTCTATACATTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000420822.1 |
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| CDS-3UTR CCA 90 bp | CCTTCCCTCTTGCCAGCTTCTAATATTCCTCTGTCCAGTGCATTCTCAGCTTCACCCCTCCCCCAACAATaGCGCGGCCGGCACCGGCAG | + |
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Preference number: 4 (lower is better) Translates to: PSLLPASNIPLSSAFSASPLPQQ*RGRHRQ Trigger: CTGCCGGTGCCGGCCGCGCCATTGTTGGGGGAGGGG...TGAAGCTGAGAATGCACTGGACAGAGGAATATTAGAAGCTGGCAAGAGGGAAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000420822.1 |
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| CDS-3UTR GCA 90 bp | CCTTCCCTCTTGCCAGCTTCTAATATTCCTCTGTCCAGTGCATTCTCAGCTTCAGGGCTACGCTGGGGCTaGACCGCGCAAGCAGACGCC | + |
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Preference number: 4 (lower is better) Translates to: PSLLPASNIPLSSAFSASGLRWG*TAQADA Trigger: GGCGTCTGCTTGCGCGGTGCAGCCCCAGCGTAGCCC...TGAAGCTGAGAATGCACTGGACAGAGGAATATTAGAAGCTGGCAAGAGGGAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000420822.1 |
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| CDS-3UTR CCA 90 bp | CCTTCCCTCTTGCCAGCTTCTAATATTCCTCTGTCCAGTGCATTCTCAGCTTCAAGCCCCGGGCTACGCTaGGGCTGCACCGCGCAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PSLLPASNIPLSSAFSASSPGLR*GCTAQA Trigger: TGCTTGCGCGGTGCAGCCCCAGCGTAGCCCGGGGCT...TGAAGCTGAGAATGCACTGGACAGAGGAATATTAGAAGCTGGCAAGAGGGAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000420822.1 |
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| CDS-3UTR TCA 90 bp | CTTCCCTCTTGCCAGCTTCTAATATTCCTCTGTCCAGTGCATTCTCAGCTTCAAGGTGGGAGGACTGCTTaGGCCCAGGCCAGGAGTTCG | + |
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Preference number: 4 (lower is better) Translates to: LPSCQLLIFLCPVHSQLQGGRTA*AQARSS Trigger: CGAACTCCTGGCCTGGGCTCAAGCAGTCCTCCCACC...TTGAAGCTGAGAATGCACTGGACAGAGGAATATTAGAAGCTGGCAAGAGGGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000420822.1 |
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| CDS-3UTR CCA 90 bp | GAATGTATAGACATAAGATGGAGCCAGGCAAGATGGCACACGCCCGTGGTCCCATGTATAGACATAAGATaGAGCCAGGCAAGATGGCAC | + |
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Preference number: 4 (lower is better) Translates to: ECIDIRWSQARWHTPVVPCIDIR*SQARWH Trigger: GTGCCATCTTGCCTGGCTCCATCTTATGTCTATACA...TGGGACCACGGGCGTGTGCCATCTTGCCTGGCTCCATCTTATGTCTATACATTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000420822.1 |
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| CDS-3UTR GCA 90 bp | CCTTCCCTCTTGCCAGCTTCTAATATTCCTCTGTCCAGTGCATTCTCAGCTTCATATTCCTCTGTCCAGTaGATTCTCAGCTTCAATTCA | + |
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Preference number: 4 (lower is better) Translates to: PSLLPASNIPLSSAFSASYSSVQ*ILSFNS Trigger: TGAATTGAAGCTGAGAATGCACTGGACAGAGGAATA...TGAAGCTGAGAATGCACTGGACAGAGGAATATTAGAAGCTGGCAAGAGGGAAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000420822.1 |
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| CDS-3UTR GCA 90 bp | CTTCCCTCTTGCCAGCTTCTAATATTCCTCTGTCCAGTGCATTCTCAGCTTCAATTTATCATCATCCCATaGTTAATGCCTGGTACCTTA | + |
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Preference number: 4 (lower is better) Translates to: LPSCQLLIFLCPVHSQLQFIIIP*LMPGTL Trigger: TAAGGTACCAGGCATTAAGCATGGGATGATGATAAA...TTGAAGCTGAGAATGCACTGGACAGAGGAATATTAGAAGCTGGCAAGAGGGAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000420822.1 |
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| CDS-3UTR CAA 90 bp | CCTTCCCTCTTGCCAGCTTCTAATATTCCTCTGTCCAGTGCATTCTCAGCTTCAACCTTACCTTCCCTCTaGCCAGCTTCTAATATTCCT | + |
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Preference number: 5 (lower is better) Translates to: PSLLPASNIPLSSAFSASTLPSL*PASNIP Trigger: AGGAATATTAGAAGCTGGCAAGAGGGAAGGTAAGGT...TGAAGCTGAGAATGCACTGGACAGAGGAATATTAGAAGCTGGCAAGAGGGAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000420822.1 |
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