Pregenerated sensors for CCDC73 (Homo sapiens)
Ensembl gene IDs: ENSG00000186714Ensembl transcript IDs: ENST00000335185.10, ENST00000528333.1, ENST00000531481.1, ENST00000534415.1
Found 66 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTTATCTCAGAACCTATCACCACCTCTAAAAGAAAATCAGCTTACTaGATCACAGAAGACAGAAACTTACTAGTAGTTAAGGACTTACCT | + |
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Preference number: 1 (lower is better) Translates to: FISEPITTSKRKSAY*ITEDRNLLVVKDLP Trigger: AGGTAAGTCCTTAACTACTAGTAAGTTTCTGTCTTCTGTGATTCAGTAAGCTGATTTTCTTTTAGAGGTGGTGATAGGTTCTGAGATAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000531481.1 |
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| 3UTR CAA 90 bp | AATGCTGGGACCAGAAGTGTTTCATATTTGGGATATTTTGGGATTTaGGAATATTTGCATTATACCTACGGGTTAAGCATCTCAAATGCA | + |
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Preference number: 2 (lower is better) Translates to: NAGTRSVSYLGYFGI*EYLHYTYGLSISNA Trigger: TGCATTTGAGATGCTTAACCCGTAGGTATAATGCAAATATTCCAAAATCCCAAAATATCCCAAATATGAAACACTTCTGGTCCCAGCATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531481.1 |
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| 3UTR-3UTR TCA 90 bp | ACAGAAGACAGAAACTTACTAGTAGTTAAGGACTTACCTATAGGAGCTCATAAACTTAGAGCATCATGTTaGCACTCAAAAAGTTTCCAA | + |
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Preference number: 2 (lower is better) Translates to: TEDRNLLVVKDLPIGAHKLRASC*HSKSFQ Trigger: TTGGAAACTTTTTGAGTGTCAACATGATGCTCTAAG...TTTATGAGCTCCTATAGGTAAGTCCTTAACTACTAGTAAGTTTCTGTCTTCTGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000531481.1 |
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| 3UTR-3UTR CCA 90 bp | ACAGAAGACAGAAACTTACTAGTAGTTAAGGACTTACCTATAGGAGCTCATAAATCTAATCAGAAATGCTaGGACCAGAAGTGTTTCATA | + |
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Preference number: 2 (lower is better) Translates to: TEDRNLLVVKDLPIGAHKSNQKC*DQKCFI Trigger: TATGAAACACTTCTGGTCCCAGCATTTCTGATTAGA...TTTATGAGCTCCTATAGGTAAGTCCTTAACTACTAGTAAGTTTCTGTCTTCTGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531481.1 |
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| 3UTR-3UTR CCA 90 bp | ACAGAAGACAGAAACTTACTAGTAGTTAAGGACTTACCTATAGGAGCTCATAAATCAGTACAAATGTCATaGTACTTAAAGCTAAACCAG | + |
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Preference number: 2 (lower is better) Translates to: TEDRNLLVVKDLPIGAHKSVQMS*YLKLNQ Trigger: CTGGTTTAGCTTTAAGTACCATGACATTTGTACTGA...TTTATGAGCTCCTATAGGTAAGTCCTTAACTACTAGTAAGTTTCTGTCTTCTGT 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531481.1 |
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| 3UTR-3UTR CAA 90 bp | ACAGAAGACAGAAACTTACTAGTAGTTAAGGACTTACCTATAGGAGCTCATAAAAGGACCCTAACTTTATaGCTCCCCAAAGTCGTGCCT | + |
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Preference number: 3 (lower is better) Translates to: TEDRNLLVVKDLPIGAHKRTLTL*LPKVVP Trigger: AGGCACGACTTTGGGGAGCAATAAAGTTAGGGTCCT...TTTATGAGCTCCTATAGGTAAGTCCTTAACTACTAGTAAGTTTCTGTCTTCTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000531481.1 |
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| 3UTR-3UTR CAA 90 bp | ACAGAAGACAGAAACTTACTAGTAGTTAAGGACTTACCTATAGGAGCTCATAAAACACTAGTGGCTATCTaGTTTCCTGTCTTGCCCATA | + |
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Preference number: 3 (lower is better) Translates to: TEDRNLLVVKDLPIGAHKTLVAI*FPVLPI Trigger: TATGGGCAAGACAGGAAACAAGATAGCCACTAGTGT...TTTATGAGCTCCTATAGGTAAGTCCTTAACTACTAGTAAGTTTCTGTCTTCTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531481.1 |
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| 3UTR-3UTR CAA 90 bp | ACAGAAGACAGAAACTTACTAGTAGTTAAGGACTTACCTATAGGAGCTCATAAAAAAACCACTGTAGCGTaGAAGATGACTTTCAGTACA | + |
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Preference number: 3 (lower is better) Translates to: TEDRNLLVVKDLPIGAHKKTTVA*KMTFST Trigger: TGTACTGAAAGTCATCTTCAACGCTACAGTGGTTTT...TTTATGAGCTCCTATAGGTAAGTCCTTAACTACTAGTAAGTTTCTGTCTTCTGT 37% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENST00000531481.1 |
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| 3UTR-3UTR CAA 90 bp | ACAGAAGACAGAAACTTACTAGTAGTTAAGGACTTACCTATAGGAGCTCATAAAATCTTGTTTCCTGTCTaGCCCATAGAACCAAATAAC | + |
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Preference number: 3 (lower is better) Translates to: TEDRNLLVVKDLPIGAHKILFPV*PIEPNN Trigger: GTTATTTGGTTCTATGGGCAAGACAGGAAACAAGAT...TTTATGAGCTCCTATAGGTAAGTCCTTAACTACTAGTAAGTTTCTGTCTTCTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531481.1 |
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| 3UTR TCA 72 bp | GCCCATATATGCCTATATGAACGTAGTTTACTACCCTaGTTTAGTTTTGAAAATGAGATGAAGAGGTCCATT | + |
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Preference number: 3 (lower is better) Translates to: AHICLYERSLLP*FSFENEMKRSI Trigger: AATGGACCTCTTCATCTCATTTTCAAAACTAAATCAGGGTAGTAAACTACGTTCATATAGGCATATATGGGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000531481.1 |
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| CDS-3UTR CCA 90 bp | TCAGAAATGCTGGGACCAGAAGTGTTTCATATTTGGGATATTTTGGGATTTTGGGGTAGGTTACGCAGCTaGAGGTGCAGGGCAAACCCG | + |
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Preference number: 4 (lower is better) Translates to: SEMLGPEVFHIWDILGFWGRLRS*RCRANP Trigger: CGGGTTTGCCCTGCACCTCCAGCTGCGTAACCTACC...CCAAAATCCCAAAATATCCCAAATATGAAACACTTCTGGTCCCAGCATTTCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000531481.1 |
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| CDS-3UTR CCA 90 bp | TCAGAAATGCTGGGACCAGAAGTGTTTCATATTTGGGATATTTTGGGATTTTGGTGTGGCTGCTTCTCCTaGGTCGGGAGCGTGGAAGAT | + |
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Preference number: 4 (lower is better) Translates to: SEMLGPEVFHIWDILGFWCGCFS*VGSVED Trigger: ATCTTCCACGCTCCCGACCCAGGAGAAGCAGCCACA...CCAAAATCCCAAAATATCCCAAATATGAAACACTTCTGGTCCCAGCATTTCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000531481.1 |
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| CDS-3UTR GCA 90 bp | ACAGAAGACAGAAACTTACTAGTAGTTAAGGACTTACCTATAGGAGCTCATAAAATGCCTCAGTGTGGCTaGTTCTCCTGGGTCGGGAGC | + |
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Preference number: 4 (lower is better) Translates to: TEDRNLLVVKDLPIGAHKMPQCG*FSWVGS Trigger: GCTCCCGACCCAGGAGAAGCAGCCACACTGAGGCAT...TTTATGAGCTCCTATAGGTAAGTCCTTAACTACTAGTAAGTTTCTGTCTTCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531481.1 |
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| 3UTR CAA 72 bp | GCTCCCCAAAGTCGTGCCTTCACACTAGTGGCTATCTaGTTTCCTGTCTTGCCCATAGAACCAAATAACATA | + |
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Preference number: 4 (lower is better) Translates to: APQSRAFTLVAI*FPVLPIEPNNI Trigger: TATGTTATTTGGTTCTATGGGCAAGACAGGAAACAAGATAGCCACTAGTGTGAAGGCACGACTTTGGGGAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531481.1 |
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| CDS-3UTR GCA 90 bp | TCAGAAATGCTGGGACCAGAAGTGTTTCATATTTGGGATATTTTGGGATTTTGGCCGCAGTCTCAATCCTaGCCAAGCAGAGATCCAGAT | + |
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Preference number: 4 (lower is better) Translates to: SEMLGPEVFHIWDILGFWPQSQS*PSRDPD Trigger: ATCTGGATCTCTGCTTGGGCAGGATTGAGACTGCGG...CCAAAATCCCAAAATATCCCAAATATGAAACACTTCTGGTCCCAGCATTTCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000531481.1 |
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| CDS-3UTR CCA 90 bp | ACAGAAGACAGAAACTTACTAGTAGTTAAGGACTTACCTATAGGAGCTCATAAAGCCAAAGCAGCCCCTTaGCAACCAGAGCAAGGAAGG | + |
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Preference number: 4 (lower is better) Translates to: TEDRNLLVVKDLPIGAHKAKAAP*QPEQGR Trigger: CCTTCCTTGCTCTGGTTGCCAAGGGGCTGCTTTGGC...TTTATGAGCTCCTATAGGTAAGTCCTTAACTACTAGTAAGTTTCTGTCTTCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531481.1 |
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| CDS-3UTR CCA 90 bp | ACAGAAGACAGAAACTTACTAGTAGTTAAGGACTTACCTATAGGAGCTCATAAACCTGGGTCGGGAGCGTaGAAGATTCTAGACACAGCC | + |
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Preference number: 4 (lower is better) Translates to: TEDRNLLVVKDLPIGAHKPGSGA*KILDTA Trigger: GGCTGTGTCTAGAATCTTCCACGCTCCCGACCCAGG...TTTATGAGCTCCTATAGGTAAGTCCTTAACTACTAGTAAGTTTCTGTCTTCTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531481.1 |
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| CDS-3UTR CCA 90 bp | ACAGAAGACAGAAACTTACTAGTAGTTAAGGACTTACCTATAGGAGCTCATAAAATGGATGCCTCAGTGTaGCTGCTTCTCCTGGGTCGG | + |
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Preference number: 4 (lower is better) Translates to: TEDRNLLVVKDLPIGAHKMDASV*LLLLGR Trigger: CCGACCCAGGAGAAGCAGCCACACTGAGGCATCCAT...TTTATGAGCTCCTATAGGTAAGTCCTTAACTACTAGTAAGTTTCTGTCTTCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531481.1 |
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| CDS-3UTR GCA 90 bp | TCAGAAATGCTGGGACCAGAAGTGTTTCATATTTGGGATATTTTGGGATTTTGGAGAGATCCAGATGGATaGCTCAGTGTGGCTGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: SEMLGPEVFHIWDILGFWRDPDG*LSVAAS Trigger: AGAAGCAGCCACACTGAGGCATCCATCTGGATCTCT...CCAAAATCCCAAAATATCCCAAATATGAAACACTTCTGGTCCCAGCATTTCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000531481.1 |
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| CDS-3UTR GCA 90 bp | TCAGAAATGCTGGGACCAGAAGTGTTTCATATTTGGGATATTTTGGGATTTTGGTGCTCCCCAAAGTCGTaGCTTCACACTAGTGGCTAT | + |
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Preference number: 4 (lower is better) Translates to: SEMLGPEVFHIWDILGFWCSPKS*LHTSGY Trigger: ATAGCCACTAGTGTGAAGGCACGACTTTGGGGAGCA...CCAAAATCCCAAAATATCCCAAATATGAAACACTTCTGGTCCCAGCATTTCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000531481.1 |
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| CDS-3UTR CCA 90 bp | TCAGAAATGCTGGGACCAGAAGTGTTTCATATTTGGGATATTTTGGGATTTTGGGGGCAAACCCGTAAGTaGACCCTGCATGAAAAGATT | + |
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Preference number: 4 (lower is better) Translates to: SEMLGPEVFHIWDILGFWGQTRK*TLHEKI Trigger: AATCTTTTCATGCAGGGTCCACTTACGGGTTTGCCC...CCAAAATCCCAAAATATCCCAAATATGAAACACTTCTGGTCCCAGCATTTCTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000531481.1 |
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| CDS-3UTR CCA 90 bp | ACAGAAGACAGAAACTTACTAGTAGTTAAGGACTTACCTATAGGAGCTCATAAAAAGCAGAGATCCAGATaGATGCCTCAGTGTGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: TEDRNLLVVKDLPIGAHKKQRSR*MPQCGC Trigger: GCAGCCACACTGAGGCATCCATCTGGATCTCTGCTT...TTTATGAGCTCCTATAGGTAAGTCCTTAACTACTAGTAAGTTTCTGTCTTCTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000531481.1 |
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| CDS-3UTR TCA 90 bp | TCAGAAATGCTGGGACCAGAAGTGTTTCATATTTGGGATATTTTGGGATTTTGGCTTAGAGCATCATGTTaGCACTCAAAAAGTTTCCAA | + |
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Preference number: 4 (lower is better) Translates to: SEMLGPEVFHIWDILGFWLRASC*HSKSFQ Trigger: TTGGAAACTTTTTGAGTGTCAACATGATGCTCTAAG...CCAAAATCCCAAAATATCCCAAATATGAAACACTTCTGGTCCCAGCATTTCTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000531481.1 |
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| CDS-3UTR TCA 90 bp | TCAGAAATGCTGGGACCAGAAGTGTTTCATATTTGGGATATTTTGGGATTTTGGAGAAAATCAGCTTACTaGATCACAGAAGACAGAAAC | + |
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Preference number: 4 (lower is better) Translates to: SEMLGPEVFHIWDILGFWRKSAY*ITEDRN Trigger: GTTTCTGTCTTCTGTGATTCAGTAAGCTGATTTTCT...CCAAAATCCCAAAATATCCCAAATATGAAACACTTCTGGTCCCAGCATTTCTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000531481.1 |
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| CDS-3UTR CCA 90 bp | TCAGAAATGCTGGGACCAGAAGTGTTTCATATTTGGGATATTTTGGGATTTTGGTCTAATCAGAAATGCTaGGACCAGAAGTGTTTCATA | + |
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Preference number: 4 (lower is better) Translates to: SEMLGPEVFHIWDILGFWSNQKC*DQKCFI Trigger: TATGAAACACTTCTGGTCCCAGCATTTCTGATTAGA...CCAAAATCCCAAAATATCCCAAATATGAAACACTTCTGGTCCCAGCATTTCTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000531481.1 |
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| CDS-3UTR GCA 90 bp | ACAGAAGACAGAAACTTACTAGTAGTTAAGGACTTACCTATAGGAGCTCATAAAATTGCTTCCTTGTGTTaGTCTGCCAATGTTTCCTTT | + |
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Preference number: 4 (lower is better) Translates to: TEDRNLLVVKDLPIGAHKIASLC*SANVSF Trigger: AAAGGAAACATTGGCAGAGCAACACAAGGAAGCAAT...TTTATGAGCTCCTATAGGTAAGTCCTTAACTACTAGTAAGTTTCTGTCTTCTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531481.1 |
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| CDS-3UTR GCA 90 bp | ACAGAAGACAGAAACTTACTAGTAGTTAAGGACTTACCTATAGGAGCTCATAAATTTAAAAACTGCCATTaGTTCCTTGTGTTGCTCTGC | + |
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Preference number: 4 (lower is better) Translates to: TEDRNLLVVKDLPIGAHKFKNCH*FLVLLC Trigger: GCAGAGCAACACAAGGAAGCAATGGCAGTTTTTAAA...TTTATGAGCTCCTATAGGTAAGTCCTTAACTACTAGTAAGTTTCTGTCTTCTGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000531481.1 |
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| 3UTR CAA 72 bp | ACCAGAAGTGTTTCATATTTGGGATATTTTGGGATTTaGGAATATTTGCATTATACCTACGGGTTAAGCATC | + |
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Preference number: 4 (lower is better) Translates to: TRSVSYLGYFGI*EYLHYTYGLSI Trigger: GATGCTTAACCCGTAGGTATAATGCAAATATTCCAAAATCCCAAAATATCCCAAATATGAAACACTTCTGGT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531481.1 |
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| CDS-3UTR GCA 90 bp | ACAGAAGACAGAAACTTACTAGTAGTTAAGGACTTACCTATAGGAGCTCATAAATTCATAATGAATTTCTaGTTCCCTTCTCATACGCAA | + |
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Preference number: 4 (lower is better) Translates to: TEDRNLLVVKDLPIGAHKFIMNF*FPSHTQ Trigger: TTGCGTATGAGAAGGGAAGCAGAAATTCATTATGAA...TTTATGAGCTCCTATAGGTAAGTCCTTAACTACTAGTAAGTTTCTGTCTTCTGT 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531481.1 |
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| CDS-3UTR GCA 90 bp | ACAGAAGACAGAAACTTACTAGTAGTTAAGGACTTACCTATAGGAGCTCATAAAAATGTCAGCATTCATTaGTTCCTAAACACATGTACA | + |
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Preference number: 4 (lower is better) Translates to: TEDRNLLVVKDLPIGAHKNVSIH*FLNTCT Trigger: TGTACATGTGTTTAGGAAGCAATGAATGCTGACATT...TTTATGAGCTCCTATAGGTAAGTCCTTAACTACTAGTAAGTTTCTGTCTTCTGT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000531481.1 |
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| CDS CCA 90 bp | GCCATTGCATTCTTCTCTTCACTGGGTTCTCCCTTGGGATCTGGATaGATACTCCAGTTATTCAAAGTGTCAGCAACTCTGTTAATGCTG | + |
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Preference number: 5 (lower is better) Translates to: AIAFFSSLGSPLGSG*ILQLFKVSATLLML Trigger: CAGCATTAACAGAGTTGCTGACACTTTGAATAACTGGAGTATCCATCCAGATCCCAAGGGAGAACCCAGTGAAGAGAAGAATGCAATGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000335185.10 |
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| CDS-3UTR CAA 90 bp | ACAGAAGACAGAAACTTACTAGTAGTTAAGGACTTACCTATAGGAGCTCATAAAGGCCAAAGCAGCCCCTaGGCAACCAGAGCAAGGAAG | + |
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Preference number: 5 (lower is better) Translates to: TEDRNLLVVKDLPIGAHKGQSSP*ATRARK Trigger: CTTCCTTGCTCTGGTTGCCAAGGGGCTGCTTTGGCC...TTTATGAGCTCCTATAGGTAAGTCCTTAACTACTAGTAAGTTTCTGTCTTCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531481.1 |
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| CDS GCA 90 bp | CACATGTTCTGTGGGAAAAGAGGAATCATAAAAAGTCTTTGCCATTaGATTCTTCTCTTCACTGGGTTCTCCCTTGGGATCTGGATGGAT | + |
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Preference number: 5 (lower is better) Translates to: HMFCGKRGIIKSLCH*ILLFTGFSLGIWMD Trigger: ATCCATCCAGATCCCAAGGGAGAACCCAGTGAAGAGAAGAATGCAATGGCAAAGACTTTTTATGATTCCTCTTTTCCCACAGAACATGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000335185.10 |
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| CDS CCA 90 bp | CTTTGCCATTGCATTCTTCTCTTCACTGGGTTCTCCCTTGGGATCTaGATGGATACTCCAGTTATTCAAAGTGTCAGCAACTCTGTTAAT | + |
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Preference number: 5 (lower is better) Translates to: LCHCILLFTGFSLGI*MDTPVIQSVSNSVN Trigger: ATTAACAGAGTTGCTGACACTTTGAATAACTGGAGTATCCATCCAGATCCCAAGGGAGAACCCAGTGAAGAGAAGAATGCAATGGCAAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000335185.10 |
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| CDS CCA 90 bp | AAAAAGTCTTTGCCATTGCATTCTTCTCTTCACTGGGTTCTCCCTTaGGATCTGGATGGATACTCCAGTTATTCAAAGTGTCAGCAACTC | + |
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Preference number: 5 (lower is better) Translates to: KKSLPLHSSLHWVLP*DLDGYSSYSKCQQL Trigger: GAGTTGCTGACACTTTGAATAACTGGAGTATCCATCCAGATCCCAAGGGAGAACCCAGTGAAGAGAAGAATGCAATGGCAAAGACTTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000335185.10 |
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| CDS-3UTR CAA 90 bp | TCAGAAATGCTGGGACCAGAAGTGTTTCATATTTGGGATATTTTGGGATTTTGGAGGACCCTAACTTTATaGCTCCCCAAAGTCGTGCCT | + |
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Preference number: 5 (lower is better) Translates to: SEMLGPEVFHIWDILGFWRTLTL*LPKVVP Trigger: AGGCACGACTTTGGGGAGCAATAAAGTTAGGGTCCT...CCAAAATCCCAAAATATCCCAAATATGAAACACTTCTGGTCCCAGCATTTCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000531481.1 |
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| CDS GCA 90 bp | TGTTTTCTGATGGATCTAGTGGTCTCTCCTTCAGCAACAAAGAAATaGAAGGGGTCGAACTGCTCGCTGTTTGACTTTCAATGTGATTTA | + |
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Preference number: 5 (lower is better) Translates to: CFLMDLVVSPSATKK*KGSNCSLFDFQCDL Trigger: TAAATCACATTGAAAGTCAAACAGCGAGCAGTTCGACCCCTTGCATTTCTTTGTTGCTGAAGGAGAGACCACTAGATCCATCAGAAAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335185.10 |
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| CDS-3UTR CAA 90 bp | TCAGAAATGCTGGGACCAGAAGTGTTTCATATTTGGGATATTTTGGGATTTTGGACTGCCATTGCTTCCTaGTGTTGCTCTGCCAATGTT | + |
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Preference number: 5 (lower is better) Translates to: SEMLGPEVFHIWDILGFWTAIAS*CCSANV Trigger: AACATTGGCAGAGCAACACAAGGAAGCAATGGCAGT...CCAAAATCCCAAAATATCCCAAATATGAAACACTTCTGGTCCCAGCATTTCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000531481.1 |
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| CDS TCA 90 bp | GTTGACCTTCCGCTTCTGTTTACTAAATCTCCAGATGGCTCTATGTaGAATGAATGTGATTCCTCCAGCTGTCCTTCACTGAACATTTTT | + |
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Preference number: 5 (lower is better) Translates to: VDLPLLFTKSPDGSM*NECDSSSCPSLNIF Trigger: AAAAATGTTCAGTGAAGGACAGCTGGAGGAATCACATTCATTTCACATAGAGCCATCTGGAGATTTAGTAAACAGAAGCGGAAGGTCAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000335185.10 |
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| CDS GCA 90 bp | TGCCAGTCATCATCACCAGAAGTATTTTTAGTCGTCTTGATTGCCTaGAAATGGCTTTGTAGTGGAGTTGATATCAGAGGCTTTGTTTTC | + |
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Preference number: 5 (lower is better) Translates to: CQSSSPEVFLVVLIA*KWLCSGVDIRGFVF Trigger: GAAAACAAAGCCTCTGATATCAACTCCACTACAAAGCCATTTGCAGGCAATCAAGACGACTAAAAATACTTCTGGTGATGATGACTGGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000335185.10 ENST00000528333.1 |
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| CDS CCA 90 bp | AAGAGGAATCATAAAAAGTCTTTGCCATTGCATTCTTCTCTTCACTaGGTTCTCCCTTGGGATCTGGATGGATACTCCAGTTATTCAAAG | + |
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Preference number: 5 (lower is better) Translates to: KRNHKKSLPLHSSLH*VLPWDLDGYSSYSK Trigger: CTTTGAATAACTGGAGTATCCATCCAGATCCCAAGGGAGAACCCAGTGAAGAGAAGAATGCAATGGCAAAGACTTTTTATGATTCCTCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000335185.10 |
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| CDS-3UTR CAA 90 bp | TCAGAAATGCTGGGACCAGAAGTGTTTCATATTTGGGATATTTTGGGATTTTGGCATTGCTTCCTTGTGTaGCTCTGCCAATGTTTCCTT | + |
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Preference number: 5 (lower is better) Translates to: SEMLGPEVFHIWDILGFWHCFLV*LCQCFL Trigger: AAGGAAACATTGGCAGAGCAACACAAGGAAGCAATG...CCAAAATCCCAAAATATCCCAAATATGAAACACTTCTGGTCCCAGCATTTCTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000531481.1 |
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| CDS CCA 90 bp | TCATCATCACCAGAAGTATTTTTAGTCGTCTTGATTGCCTGCAAATaGCTTTGTAGTGGAGTTGATATCAGAGGCTTTGTTTTCACATGT | + |
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Preference number: 5 (lower is better) Translates to: SSSPEVFLVVLIACK*LCSGVDIRGFVFTC Trigger: ACATGTGAAAACAAAGCCTCTGATATCAACTCCACTACAAAGCCATTTGCAGGCAATCAAGACGACTAAAAATACTTCTGGTGATGATGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000335185.10 |
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| CDS TCA 90 bp | GTAGTAACTGATTTTCTGTTGTCCGTAACATTCGAGGTTTGTCCTTaGCTAATTACTTCTTTATCTAAGGAGAGGGTTTTGCTTAAGGAG | + |
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Preference number: 5 (lower is better) Translates to: VVTDFLLSVTFEVCP*LITSLSKERVLLKE Trigger: CTCCTTAAGCAAAACCCTCTCCTTAGATAAAGAAGTAATTAGTCAAGGACAAACCTCGAATGTTACGGACAACAGAAAATCAGTTACTAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335185.10 |
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| CDS TCA 90 bp | TTTTCTTTTAGCACCTTCAATTCTGCCTCCATTTCAGTATTAGCTTaGATTTGTTGCCGAAGTAACTGCTGCATATGTTGGAAAGAAATG | + |
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Preference number: 5 (lower is better) Translates to: FSFSTFNSASISVLA*ICCRSNCCICWKEM Trigger: CATTTCTTTCCAACATATGCAGCAGTTACTTCGGCAACAAATTCAAGCTAATACTGAAATGGAGGCAGAATTGAAGGTGCTAAAAGAAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335185.10 |
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| CDS TCA 90 bp | TGTGCAAGTTTTCATGTGAACAGCAGTTTTCACATCTTTGGCTTGTaGAGCATGACTATTCTCATTGTTAAGATGAAGATGGGAAATGTT | + |
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Preference number: 5 (lower is better) Translates to: CASFHVNSSFHIFGL*SMTILIVKMKMGNV Trigger: AACATTTCCCATCTTCATCTTAACAATGAGAATAGTCATGCTTCACAAGCCAAAGATGTGAAAACTGCTGTTCACATGAAAACTTGCACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335185.10 |
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| CDS-3UTR CAA 90 bp | ACAGAAGACAGAAACTTACTAGTAGTTAAGGACTTACCTATAGGAGCTCATAAACTGAAGAGTTTCCTTTaGCCATTTAAGTTCCTGTGT | + |
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Preference number: 5 (lower is better) Translates to: TEDRNLLVVKDLPIGAHKLKSFL*PFKFLC Trigger: ACACAGGAACTTAAATGGCAAAAGGAAACTCTTCAG...TTTATGAGCTCCTATAGGTAAGTCCTTAACTACTAGTAAGTTTCTGTCTTCTGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531481.1 |
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| CDS TCA 90 bp | ATGGCTCTATGTGAAATGAATGTGATTCCTCCAGCTGTCCTTCACTaGACATTTTTCCTGAAACAATGTCATTTAATGATTCTGTTTTCT | + |
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Preference number: 5 (lower is better) Translates to: MALCEMNVIPPAVLH*TFFLKQCHLMILFS Trigger: AGAAAACAGAATCATTAAATGACATTGTTTCAGGAAAAATGTTCAGTGAAGGACAGCTGGAGGAATCACATTCATTTCACATAGAGCCAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000335185.10 |
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| CDS CCA 90 bp | TTCAGAAGTAGTTTTGAATTAGCACTAAAAGCAGCATATGAAACATaGTGGTCGATTACTATATCACAGGGAACAGTTAGTTCAGATTTC | + |
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Preference number: 5 (lower is better) Translates to: FRSSFELALKAAYET*WSITISQGTVSSDF Trigger: GAAATCTGAACTAACTGTTCCCTGTGATATAGTAATCGACCACCATGTTTCATATGCTGCTTTTAGTGCTAATTCAAAACTACTTCTGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335185.10 |
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| CDS-3UTR CAA 90 bp | ACAGAAGACAGAAACTTACTAGTAGTTAAGGACTTACCTATAGGAGCTCATAAATGCCAATGTTTCCTTTaGATTCTGAAGAGTTTCCTT | + |
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Preference number: 5 (lower is better) Translates to: TEDRNLLVVKDLPIGAHKCQCFL*ILKSFL Trigger: AAGGAAACTCTTCAGAATCAAAAGGAAACATTGGCA...TTTATGAGCTCCTATAGGTAAGTCCTTAACTACTAGTAAGTTTCTGTCTTCTGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531481.1 |
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| CDS-3UTR CAA 90 bp | ACAGAAGACAGAAACTTACTAGTAGTTAAGGACTTACCTATAGGAGCTCATAAAGGGATTTTGGAATATTaGCATTATACCTACGGGTTA | + |
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Preference number: 5 (lower is better) Translates to: TEDRNLLVVKDLPIGAHKGILEY*HYTYGL Trigger: TAACCCGTAGGTATAATGCAAATATTCCAAAATCCC...TTTATGAGCTCCTATAGGTAAGTCCTTAACTACTAGTAAGTTTCTGTCTTCTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531481.1 |
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| CDS-3UTR CAA 90 bp | ACAGAAGACAGAAACTTACTAGTAGTTAAGGACTTACCTATAGGAGCTCATAAAAAATGTCAGCATTCATaGCTTCCTAAACACATGTAC | + |
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Preference number: 5 (lower is better) Translates to: TEDRNLLVVKDLPIGAHKKCQHS*LPKHMY Trigger: GTACATGTGTTTAGGAAGCAATGAATGCTGACATTT...TTTATGAGCTCCTATAGGTAAGTCCTTAACTACTAGTAAGTTTCTGTCTTCTGT 36% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000531481.1 |
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| CDS CAA 72 bp | CCCAGCAGTCAGGAGGCTCCAGGCCAAAGCAGCCCCTaGGCAACCAGAGCAAGGAAGGGTAGGTTACGCAGC | + |
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Preference number: 6 (lower is better) Translates to: PSSQEAPGQSSP*ATRARKGRLRS Trigger: GCTGCGTAACCTACCCTTCCTTGCTCTGGTTGCCAAGGGGCTGCTTTGGCCTGGAGCCTCCTGACTGCTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531481.1 |
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| CDS CCA 72 bp | CCAGCAGTCAGGAGGCTCCAGGCCAAAGCAGCCCCTTaGCAACCAGAGCAAGGAAGGGTAGGTTACGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: PAVRRLQAKAAP*QPEQGRVGYAA Trigger: AGCTGCGTAACCTACCCTTCCTTGCTCTGGTTGCCAAGGGGCTGCTTTGGCCTGGAGCCTCCTGACTGCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531481.1 |
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| CDS CCA 72 bp | CCCGCAGTCTCAATCCTGCCCAAGCAGAGATCCAGATaGATGCCTCAGTGTGGCTGCTTCTCCTGGGTCGGG | + |
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Preference number: 6 (lower is better) Translates to: PAVSILPKQRSR*MPQCGCFSWVG Trigger: CCCGACCCAGGAGAAGCAGCCACACTGAGGCATCCATCTGGATCTCTGCTTGGGCAGGATTGAGACTGCGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531481.1 |
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| CDS CCA 72 bp | AGATCCAGATGGATGCCTCAGTGTGGCTGCTTCTCCTaGGTCGGGAGCGTGGAAGATTCTAGACACAGCCCA | + |
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Preference number: 6 (lower is better) Translates to: RSRWMPQCGCFS*VGSVEDSRHSP Trigger: TGGGCTGTGTCTAGAATCTTCCACGCTCCCGACCCAGGAGAAGCAGCCACACTGAGGCATCCATCTGGATCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531481.1 |
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| CDS CCA 72 bp | TGCATTCTTCTCTTCACTGGGTTCTCCCTTGGGATCTaGATGGATACTCCAGTTATTCAAAGTGTCAGCAAC | + |
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Preference number: 6 (lower is better) Translates to: CILLFTGFSLGI*MDTPVIQSVSN Trigger: GTTGCTGACACTTTGAATAACTGGAGTATCCATCCAGATCCCAAGGGAGAACCCAGTGAAGAGAAGAATGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000335185.10 |
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| CDS TCA 72 bp | CCGCTTCTGTTTACTAAATCTCCAGATGGCTCTATGTaGAATGAATGTGATTCCTCCAGCTGTCCTTCACTG | + |
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Preference number: 6 (lower is better) Translates to: PLLFTKSPDGSM*NECDSSSCPSL Trigger: CAGTGAAGGACAGCTGGAGGAATCACATTCATTTCACATAGAGCCATCTGGAGATTTAGTAAACAGAAGCGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000335185.10 |
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| CDS CCA 72 bp | TTGCCATTGCATTCTTCTCTTCACTGGGTTCTCCCTTaGGATCTGGATGGATACTCCAGTTATTCAAAGTGT | + |
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Preference number: 6 (lower is better) Translates to: LPLHSSLHWVLP*DLDGYSSYSKC Trigger: ACACTTTGAATAACTGGAGTATCCATCCAGATCCCAAGGGAGAACCCAGTGAAGAGAAGAATGCAATGGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000335185.10 |
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| CDS CCA 72 bp | CATAAAAAGTCTTTGCCATTGCATTCTTCTCTTCACTaGGTTCTCCCTTGGGATCTGGATGGATACTCCAGT | + |
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Preference number: 6 (lower is better) Translates to: HKKSLPLHSSLH*VLPWDLDGYSS Trigger: ACTGGAGTATCCATCCAGATCCCAAGGGAGAACCCAGTGAAGAGAAGAATGCAATGGCAAAGACTTTTTATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000335185.10 |
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| CDS TCA 72 bp | AGCACCTTCAATTCTGCCTCCATTTCAGTATTAGCTTaGATTTGTTGCCGAAGTAACTGCTGCATATGTTGG | + |
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Preference number: 6 (lower is better) Translates to: STFNSASISVLA*ICCRSNCCICW Trigger: CCAACATATGCAGCAGTTACTTCGGCAACAAATTCAAGCTAATACTGAAATGGAGGCAGAATTGAAGGTGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000335185.10 |
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| CDS CCA 72 bp | CCAGAAGTATTTTTAGTCGTCTTGATTGCCTGCAAATaGCTTTGTAGTGGAGTTGATATCAGAGGCTTTGTT | + |
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Preference number: 6 (lower is better) Translates to: PEVFLVVLIACK*LCSGVDIRGFV Trigger: AACAAAGCCTCTGATATCAACTCCACTACAAAGCCATTTGCAGGCAATCAAGACGACTAAAAATACTTCTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000335185.10 ENST00000528333.1 |
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| CDS TCA 72 bp | AGCACCTTCAATTCTGCCTCCATTTCAGTATTAGCTTaGATTTGTTGCCGAAGTAACTGCTGTTTTTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: STFNSASISVLA*ICCRSNCCFSS Trigger: AGAAGAAAAACAGCAGTTACTTCGGCAACAAATTCAAGCTAATACTGAAATGGAGGCAGAATTGAAGGTGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000534415.1 |
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| CDS TCA 72 bp | TTTCATGTGAACAGCAGTTTTCACATCTTTGGCTTGTaGAGCATGACTATTCTCATTGTTAAGATGAAGATG | + |
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Preference number: 6 (lower is better) Translates to: FHVNSSFHIFGL*SMTILIVKMKM Trigger: CATCTTCATCTTAACAATGAGAATAGTCATGCTTCACAAGCCAAAGATGTGAAAACTGCTGTTCACATGAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335185.10 |
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| CDS CCA 72 bp | TTTGAATTAGCACTAAAAGCAGCATATGAAACATGGTaGTCGATTACTATATCACAGGGAACAGTTAGTTCA | + |
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Preference number: 6 (lower is better) Translates to: FELALKAAYETW*SITISQGTVSS Trigger: TGAACTAACTGTTCCCTGTGATATAGTAATCGACCACCATGTTTCATATGCTGCTTTTAGTGCTAATTCAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335185.10 |
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| CDS CCA 72 bp | AGTTTTGAATTAGCACTAAAAGCAGCATATGAAACATaGTGGTCGATTACTATATCACAGGGAACAGTTAGT | + |
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Preference number: 6 (lower is better) Translates to: SFELALKAAYET*WSITISQGTVS Trigger: ACTAACTGTTCCCTGTGATATAGTAATCGACCACCATGTTTCATATGCTGCTTTTAGTGCTAATTCAAAACT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335185.10 |
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