RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CCDC33 (Homo sapiens)

Ensembl gene IDs: ENSG00000140481

Ensembl transcript IDs: ENST00000268082.4, ENST00000321374.9, ENST00000398814.8, ENST00000558645.5, ENST00000558659.5, ENST00000558821.5, ENST00000559243.1, ENST00000560148.5, ENST00000560565.1, ENST00000561332.1, ENST00000563951.1, ENST00000635913.1, ENST00000671722.1, ENST00000671751.1, ENST00000672048.1, ENST00000672087.1, ENST00000672175.1, ENST00000672263.1, ENST00000672359.1, ENST00000672882.1, ENST00000673091.1, ENST00000673214.1, ENST00000673367.1, ENST00000673517.1

Found 802 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGCCTGTTCCCTCATCCTTTCCAGGCCTTTCCCAGGAGCCGCTGCTaGGCTTCTGGCCACGGGCAAAGCACAGCTGGCTCAAGAGCAGGA +
Preference number: 1 (lower is better)
Translates to: CLFPHPFQAFPRSRC*ASGHGQSTAGSRAG
Trigger: TCCTGCTCTTGAGCCAGCTGTGCTTTGCCCGTGGCCAGAAGCTCAGCAGCGGCTCCTGGGAAAGGCCTGGAAAGGATGAGGGAACAGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
3UTR CCA 90 bp GTTGGCAAAGTGGAGCCAGTCCTAAAGCACAGTGTCAGGGCATCCTaGAGATGCCTGCATGGACCCCTCATCCACAGTCATCTCCTTGAG +
Preference number: 1 (lower is better)
Translates to: VGKVEPVLKHSVRAS*RCLHGPLIHSHLLE
Trigger: CTCAAGGAGATGACTGTGGATGAGGGGTCCATGCAGGCATCTCCAGGATGCCCTGACACTGTGCTTTAGGACTGGCTCCACTTTGCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321374.9
ENST00000673517.1
3UTR TCA 90 bp GCCATGACCTGGCAAAGATTTCTAAACCCATTTTGCCACAGCAGGTaGCACCTAATTTCTCCAAGGGTCCCCAGGGCTCAGGTGAGTGTG +
Preference number: 1 (lower is better)
Translates to: AMTWQRFLNPFCHSR*HLISPRVPRAQVSV
Trigger: CACACTCACCTGAGCCCTGGGGACCCTTGGAGAAATTAGGTGTCACCTGCTGTGGCAAAATGGGTTTAGAAATCTTTGCCAGGTCATGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
3UTR TCA 90 bp TTGTTCTCGGGAAGTTGGCAAAGTGGAGCCTACATCGTGGCCATCTaGGAAGGGTGTGCTAATTTGAGAATCTTAGGCTCTATGGATTCA +
Preference number: 1 (lower is better)
Translates to: LFSGSWQSGAYIVAI*EGCANLRILGSMDS
Trigger: TGAATCCATAGAGCCTAAGATTCTCAAATTAGCACACCCTTCTCAGATGGCCACGATGTAGGCTCCACTTTGCCAACTTCCCGAGAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
3UTR-3UTR TCA 90 bp CATTCCCAGGGGGTGACCTGCTCAAGGGCATATTGCCTGACAAACCAGGCCTCACCCAGGAGCCGCTGCTaGGCTTCTGGCCACGGGCAA +
Preference number: 2 (lower is better)
Translates to: HSQGVTCSRAYCLTNQASPRSRC*ASGHGQ
Trigger: TTGCCCGTGGCCAGAAGCTCAGCAGCGGCTCCTGGG...TGAGGCCTGGTTTGTCAGGCAATATGCCCTTGAGCAGGTCACCCCCTGGGAATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
3UTR-3UTR CCA 90 bp ACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGGCGCCTGACCCCCAGCCCTaGAGTTGGCTCCACAATGGC +
Preference number: 2 (lower is better)
Translates to: TAGSRAGEVRVFALRGWAPDPQP*SWLHNG
Trigger: GCCATTGTGGAGCCAACTCCAGGGCTGGGGGTCAGG...CGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
3UTR-3UTR CCA 90 bp GGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGGCGGTCCCGAGTGTCAGGGCATCCTaGAGATGCCTGCATGGACCC +
Preference number: 2 (lower is better)
Translates to: GSRAGEVRVFALRGWAVPSVRAS*RCLHGP
Trigger: GGGTCCATGCAGGCATCTCCAGGATGCCCTGACACT...CGGGACCGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
3UTR-3UTR TCA 90 bp TCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGGCGGTCCCGGGGAAGCTACTCTGCCCATaGGCGCAGCCAGTCCTAAAG +
Preference number: 2 (lower is better)
Translates to: SRAGEVRVFALRGWAVPGKLLCP*AQPVLK
Trigger: CTTTAGGACTGGCTGCGCTCATGGGCAGAGTAGCTT...CCCCGGGACCGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
3UTR-3UTR GCA 90 bp CAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGGCGGAGGGCATCCTGGAGATaGCTGCATGGACCCCTCATC +
Preference number: 2 (lower is better)
Translates to: QLAQEQEKSGSLLCGAGRRASWR*LHGPLI
Trigger: GATGAGGGGTCCATGCAGGCATCTCCAGGATGCCCT...CCGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
3UTR-3UTR CCA 90 bp TCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGGCGGTCCCGGGGCTGGAGATGCCTGCATaGACCCCTCATCCACAGTCA +
Preference number: 2 (lower is better)
Translates to: SRAGEVRVFALRGWAVPGLEMPA*TPHPQS
Trigger: TGACTGTGGATGAGGGGTCCATGCAGGCATCTCCAG...CCCCGGGACCGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
3UTR-3UTR CCA 90 bp GTCTCCTTCTGGGGGCTCAAGGGCTTGTTGAGCTTAGAGTCTGAGCTGGGCAGCTTTGCTTTGCGGGGCTaGGCGGTCCCGGGGTTGAAC +
Preference number: 2 (lower is better)
Translates to: VSFWGLKGLLSLESELGSFALRG*AVPGLN
Trigger: GTTCAACCCCGGGACCGCCCAGCCCCGCAAAGCAAA...GCTGCCCAGCTCAGACTCTAAGCTCAACAAGCCCTTGAGCCCCCAGAAGGAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
3UTR-3UTR CCA 90 bp GTCTCCTTCTGGGGGCTCAAGGGCTTGTTGAGCTTAGAGTCTGAGCTGGGCAGCGGTGAGGGCACTCTGTaGTGTGCAAAGCGGGGTGCG +
Preference number: 2 (lower is better)
Translates to: VSFWGLKGLLSLESELGSGEGTL*CAKRGA
Trigger: CGCACCCCGCTTTGCACACCACAGAGTGCCCTCACC...GCTGCCCAGCTCAGACTCTAAGCTCAACAAGCCCTTGAGCCCCCAGAAGGAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
3UTR-3UTR GCA 90 bp CAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGGCGGCATCCTGGAGATGCCTaGATGGACCCCTCATCCACA +
Preference number: 2 (lower is better)
Translates to: QLAQEQEKSGSLLCGAGRHPGDA*MDPSST
Trigger: TGTGGATGAGGGGTCCATGCAGGCATCTCCAGGATG...CCGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
3UTR-3UTR CCA 90 bp TCAGGGCATCCTGGAGATGCCTGCATGGACCCCTCATCCACAGTCATCTCCTTGCCTGACCCCCAGCCCTaGAGTTGGCTCCACAATGGC +
Preference number: 2 (lower is better)
Translates to: SGHPGDACMDPSSTVISLPDPQP*SWLHNG
Trigger: GCCATTGTGGAGCCAACTCCAGGGCTGGGGGTCAGG...CAAGGAGATGACTGTGGATGAGGGGTCCATGCAGGCATCTCCAGGATGCCCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
3UTR-3UTR CCA 90 bp CATTCCCAGGGGGTGACCTGCTCAAGGGCATATTGCCTGACAAACCAGGCCTCACCGCTGCTGAGCTTCTaGCCACGGGCAAAGCACAGC +
Preference number: 2 (lower is better)
Translates to: HSQGVTCSRAYCLTNQASPLLSF*PRAKHS
Trigger: GCTGTGCTTTGCCCGTGGCCAGAAGCTCAGCAGCGG...TGAGGCCTGGTTTGTCAGGCAATATGCCCTTGAGCAGGTCACCCCCTGGGAATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
3UTR-3UTR TCA 90 bp CAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGGCGGCCACAGTCATCTCCTTaGGTTTCACAGCACCCCATG +
Preference number: 2 (lower is better)
Translates to: QLAQEQEKSGSLLCGAGRPQSSP*VSQHPM
Trigger: CATGGGGTGCTGTGAAACTCAAGGAGATGACTGTGG...CCGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
3UTR-3UTR CCA 90 bp CTGAGAGTTAGCGGTCTCCTTCTGGGGGCTCAAGGGCTTGTTGAGCTTAGAGTCCCTGACCCCCAGCCCTaGAGTTGGCTCCACAATGGC +
Preference number: 2 (lower is better)
Translates to: LRVSGLLLGAQGLVELRVPDPQP*SWLHNG
Trigger: GCCATTGTGGAGCCAACTCCAGGGCTGGGGGTCAGG...GACTCTAAGCTCAACAAGCCCTTGAGCCCCCAGAAGGAGACCGCTAACTCTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
3UTR-3UTR CCA 90 bp CTGCTGAGAGTTAGCGGTCTCCTTCTGGGGGCTCAAGGGCTTGTTGAGCTTAGACCGCTGCTGAGCTTCTaGCCACGGGCAAAGCACAGC +
Preference number: 2 (lower is better)
Translates to: LLRVSGLLLGAQGLVELRPLLSF*PRAKHS
Trigger: GCTGTGCTTTGCCCGTGGCCAGAAGCTCAGCAGCGG...TCTAAGCTCAACAAGCCCTTGAGCCCCCAGAAGGAGACCGCTAACTCTCAGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
3UTR-3UTR TCA 90 bp ACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGGCGCCACAGTCATCTCCTTaGGTTTCACAGCACCCCATG +
Preference number: 2 (lower is better)
Translates to: TAGSRAGEVRVFALRGWAPQSSP*VSQHPM
Trigger: CATGGGGTGCTGTGAAACTCAAGGAGATGACTGTGG...CGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
3UTR-3UTR GCA 90 bp CAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCAGGGCATCCTGGAGATaGCTGCATGGACCCCTCATC +
Preference number: 2 (lower is better)
Translates to: QSTAGSRAGEVRVFALRGRASWR*LHGPLI
Trigger: GATGAGGGGTCCATGCAGGCATCTCCAGGATGCCCT...GCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
3UTR-3UTR CCA 90 bp GCATCCTGGAGATGCCTGCATGGACCCCTCATCCACAGTCATCTCCTTGAGTTTCCTGACCCCCAGCCCTaGAGTTGGCTCCACAATGGC +
Preference number: 2 (lower is better)
Translates to: ASWRCLHGPLIHSHLLEFPDPQP*SWLHNG
Trigger: GCCATTGTGGAGCCAACTCCAGGGCTGGGGGTCAGG...AAACTCAAGGAGATGACTGTGGATGAGGGGTCCATGCAGGCATCTCCAGGATGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
3UTR-3UTR CCA 90 bp AGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGCTGGAGATGCCTGCATaGACCCCTCATCCACAGTCA +
Preference number: 2 (lower is better)
Translates to: STAGSRAGEVRVFALRGWLEMPA*TPHPQS
Trigger: TGACTGTGGATGAGGGGTCCATGCAGGCATCTCCAG...CCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
3UTR-3UTR CCA 90 bp CAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCAGTGTCAGGGCATCCTaGAGATGCCTGCATGGACCC +
Preference number: 2 (lower is better)
Translates to: QSTAGSRAGEVRVFALRGSVRAS*RCLHGP
Trigger: GGGTCCATGCAGGCATCTCCAGGATGCCCTGACACT...GCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
3UTR-3UTR CCA 90 bp CGGGCAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGAGTGTCAGGGCATCCTaGAGATGCCTGCATGGACCC +
Preference number: 2 (lower is better)
Translates to: RAKHSWLKSRRSQGLCFASVRAS*RCLHGP
Trigger: GGGTCCATGCAGGCATCTCCAGGATGCCCTGACACT...CGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTGCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
3UTR CAA 90 bp TCTCCAAGGGTCCCCAGGGCTCAGGTGAGTGTGCAAAGGTTGCCTTaGTTCCTTGCCTGTTCCCTCATCCTTTCCAGGCCTTTCCCAGGA +
Preference number: 2 (lower is better)
Translates to: SPRVPRAQVSVQRLP*FLACSLILSRPFPG
Trigger: TCCTGGGAAAGGCCTGGAAAGGATGAGGGAACAGGCAAGGAACAAAGGCAACCTTTGCACACTCACCTGAGCCCTGGGGACCCTTGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
3UTR-3UTR GCA 90 bp CCGGGGTTGAACTTGAGGGGCAGTTGTGAGCAGGCCTGTTTGTTCTCGGGAAGTCATCCTGGAGATGCCTaGATGGACCCCTCATCCACA +
Preference number: 2 (lower is better)
Translates to: PGLNLRGSCEQACLFSGSHPGDA*MDPSST
Trigger: TGTGGATGAGGGGTCCATGCAGGCATCTCCAGGATG...ACTTCCCGAGAACAAACAGGCCTGCTCACAACTGCCCCTCAAGTTCAACCCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
3UTR-3UTR GCA 90 bp CTGCTGAGAGTTAGCGGTCTCCTTCTGGGGGCTCAAGGGCTTGTTGAGCTTAGAAGAAGTCAGGGTCTTTaGTTTGCGGGGCTGGGCGGT +
Preference number: 2 (lower is better)
Translates to: LLRVSGLLLGAQGLVELRRSQGL*FAGLGG
Trigger: ACCGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCT...TCTAAGCTCAACAAGCCCTTGAGCCCCCAGAAGGAGACCGCTAACTCTCAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
3UTR-3UTR GCA 90 bp CTGCTGAGAGTTAGCGGTCTCCTTCTGGGGGCTCAAGGGCTTGTTGAGCTTAGATCCCAGGGGGTGACCTaGTCAAGGGCATATTGCCTG +
Preference number: 2 (lower is better)
Translates to: LLRVSGLLLGAQGLVELRSQGVT*SRAYCL
Trigger: CAGGCAATATGCCCTTGAGCAGGTCACCCCCTGGGA...TCTAAGCTCAACAAGCCCTTGAGCCCCCAGAAGGAGACCGCTAACTCTCAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
3UTR-3UTR GCA 90 bp CTGAGAGTTAGCGGTCTCCTTCTGGGGGCTCAAGGGCTTGTTGAGCTTAGAGTCTCCAGCTCTGAGGGCTaGTTGAGGTCCATGGAGTGG +
Preference number: 2 (lower is better)
Translates to: LRVSGLLLGAQGLVELRVSSSEG*LRSMEW
Trigger: CCACTCCATGGACCTCAAGCAGCCCTCAGAGCTGGA...GACTCTAAGCTCAACAAGCCCTTGAGCCCCCAGAAGGAGACCGCTAACTCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
3UTR-3UTR CCA 90 bp TTCTGGCCACGGGCAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTCTGGAGATGCCTGCATaGACCCCTCATCCACAGTCA +
Preference number: 2 (lower is better)
Translates to: FWPRAKHSWLKSRRSQGLLEMPA*TPHPQS
Trigger: TGACTGTGGATGAGGGGTCCATGCAGGCATCTCCAG...AAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTGCCCGTGGCCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
3UTR-3UTR CCA 90 bp TTCCCAGGGGGTGACCTGCTCAAGGGCATATTGCCTGACAAACCAGGCCTCAGACGGGCAAAGCACAGCTaGCTCAAGAGCAGGAGAAGT +
Preference number: 2 (lower is better)
Translates to: FPGGDLLKGILPDKPGLRRAKHS*LKSRRS
Trigger: ACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTGCCCG...TCTGAGGCCTGGTTTGTCAGGCAATATGCCCTTGAGCAGGTCACCCCCTGGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
3UTR-3UTR GCA 90 bp CTGAGAGTTAGCGGTCTCCTTCTGGGGGCTCAAGGGCTTGTTGAGCTTAGAGTCCATCCTGGAGATGCCTaGATGGACCCCTCATCCACA +
Preference number: 2 (lower is better)
Translates to: LRVSGLLLGAQGLVELRVHPGDA*MDPSST
Trigger: TGTGGATGAGGGGTCCATGCAGGCATCTCCAGGATG...GACTCTAAGCTCAACAAGCCCTTGAGCCCCCAGAAGGAGACCGCTAACTCTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
3UTR-3UTR CCA 90 bp CCTCAGAGTATCCAGAATCCAGTGGGCCATGACCTGGCAAAGATTTCTAAACCCCCTGACCCCCAGCCCTaGAGTTGGCTCCACAATGGC +
Preference number: 2 (lower is better)
Translates to: PQSIQNPVGHDLAKISKPPDPQP*SWLHNG
Trigger: GCCATTGTGGAGCCAACTCCAGGGCTGGGGGTCAGG...GGGTTTAGAAATCTTTGCCAGGTCATGGCCCACTGGATTCTGGATACTCTGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
3UTR-3UTR CCA 90 bp CCGGGGTTGAACTTGAGGGGCAGTTGTGAGCAGGCCTGTTTGTTCTCGGGAAGTGTAATGGAGCAGGAATaGGAGCCTAGGACTCCTGAC +
Preference number: 2 (lower is better)
Translates to: PGLNLRGSCEQACLFSGSVMEQE*EPRTPD
Trigger: GTCAGGAGTCCTAGGCTCCCATTCCTGCTCCATTAC...ACTTCCCGAGAACAAACAGGCCTGCTCACAACTGCCCCTCAAGTTCAACCCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
3UTR-3UTR CCA 90 bp CAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCGTAATGGAGCAGGAATaGGAGCCTAGGACTCCTGAC +
Preference number: 2 (lower is better)
Translates to: QSTAGSRAGEVRVFALRGVMEQE*EPRTPD
Trigger: GTCAGGAGTCCTAGGCTCCCATTCCTGCTCCATTAC...GCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
3UTR-3UTR TCA 90 bp CTGAGAGTTAGCGGTCTCCTTCTGGGGGCTCAAGGGCTTGTTGAGCTTAGAGTCCCACAGTCATCTCCTTaGGTTTCACAGCACCCCATG +
Preference number: 2 (lower is better)
Translates to: LRVSGLLLGAQGLVELRVPQSSP*VSQHPM
Trigger: CATGGGGTGCTGTGAAACTCAAGGAGATGACTGTGG...GACTCTAAGCTCAACAAGCCCTTGAGCCCCCAGAAGGAGACCGCTAACTCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
3UTR-3UTR CCA 90 bp TCGGGAAGTTGGCAAAGTGGAGCCAGTCCTAAAGCACAGTGTCAGGGCATCCTGGTAATGGAGCAGGAATaGGAGCCTAGGACTCCTGAC +
Preference number: 2 (lower is better)
Translates to: SGSWQSGASPKAQCQGILVMEQE*EPRTPD
Trigger: GTCAGGAGTCCTAGGCTCCCATTCCTGCTCCATTAC...CAGGATGCCCTGACACTGTGCTTTAGGACTGGCTCCACTTTGCCAACTTCCCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321374.9
ENST00000673517.1
3UTR-3UTR CCA 90 bp TGTTCTCGGGAAGTTGGCAAAGTGGAGCCTACATCGTGGCCATCTGAGAAGGGTCTGGAGATGCCTGCATaGACCCCTCATCCACAGTCA +
Preference number: 2 (lower is better)
Translates to: CSREVGKVEPTSWPSEKGLEMPA*TPHPQS
Trigger: TGACTGTGGATGAGGGGTCCATGCAGGCATCTCCAG...ACCCTTCTCAGATGGCCACGATGTAGGCTCCACTTTGCCAACTTCCCGAGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
3UTR-3UTR CCA 90 bp GTCTCCTTCTGGGGGCTCAAGGGCTTGTTGAGCTTAGAGTCTGAGCTGGGCAGCTTGTTCTCGGGAAGTTaGCAAAGTGGAGCCTACATC +
Preference number: 2 (lower is better)
Translates to: VSFWGLKGLLSLESELGSLFSGS*QSGAYI
Trigger: GATGTAGGCTCCACTTTGCCAACTTCCCGAGAACAA...GCTGCCCAGCTCAGACTCTAAGCTCAACAAGCCCTTGAGCCCCCAGAAGGAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
3UTR-3UTR CCA 90 bp CATCCTGGAGATGCCTGCATGGACCCCTCATCCACAGTCATCTCCTTGAGTTTCGTAATGGAGCAGGAATaGGAGCCTAGGACTCCTGAC +
Preference number: 2 (lower is better)
Translates to: HPGDACMDPSSTVISLSFVMEQE*EPRTPD
Trigger: GTCAGGAGTCCTAGGCTCCCATTCCTGCTCCATTAC...GAAACTCAAGGAGATGACTGTGGATGAGGGGTCCATGCAGGCATCTCCAGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
3UTR CAA 90 bp CAGAATCCAGTGGGCCATGACCTGGCAAAGATTTCTAAACCCATTTaGCCACAGCAGGTGACACCTAATTTCTCCAAGGGTCCCCAGGGC +
Preference number: 2 (lower is better)
Translates to: QNPVGHDLAKISKPI*PQQVTPNFSKGPQG
Trigger: GCCCTGGGGACCCTTGGAGAAATTAGGTGTCACCTGCTGTGGCAAAATGGGTTTAGAAATCTTTGCCAGGTCATGGCCCACTGGATTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
3UTR-3UTR TCA 90 bp CTGAGAGTTAGCGGTCTCCTTCTGGGGGCTCAAGGGCTTGTTGAGCTTAGAGTCTTTTGCCACAGCAGGTaGCACCTAATTTCTCCAAGG +
Preference number: 2 (lower is better)
Translates to: LRVSGLLLGAQGLVELRVFCHSR*HLISPR
Trigger: CCTTGGAGAAATTAGGTGTCACCTGCTGTGGCAAAA...GACTCTAAGCTCAACAAGCCCTTGAGCCCCCAGAAGGAGACCGCTAACTCTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
3UTR-3UTR CCA 90 bp TTTGTTCTCGGGAAGTTGGCAAAGTGGAGCCTACATCGTGGCCATCTGAGAAGGGTAATGGAGCAGGAATaGGAGCCTAGGACTCCTGAC +
Preference number: 2 (lower is better)
Translates to: FVLGKLAKWSLHRGHLRRVMEQE*EPRTPD
Trigger: GTCAGGAGTCCTAGGCTCCCATTCCTGCTCCATTAC...CCTTCTCAGATGGCCACGATGTAGGCTCCACTTTGCCAACTTCCCGAGAACAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
3UTR-3UTR TCA 90 bp CCTCAGAGTATCCAGAATCCAGTGGGCCATGACCTGGCAAAGATTTCTAAACCCCCACAGTCATCTCCTTaGGTTTCACAGCACCCCATG +
Preference number: 2 (lower is better)
Translates to: PQSIQNPVGHDLAKISKPPQSSP*VSQHPM
Trigger: CATGGGGTGCTGTGAAACTCAAGGAGATGACTGTGG...GGGTTTAGAAATCTTTGCCAGGTCATGGCCCACTGGATTCTGGATACTCTGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
3UTR-3UTR TCA 90 bp CCTCAGAGTATCCAGAATCCAGTGGGCCATGACCTGGCAAAGATTTCTAAACCCTACATCGTGGCCATCTaGGAAGGGTGTGCTAATTTG +
Preference number: 2 (lower is better)
Translates to: PQSIQNPVGHDLAKISKPYIVAI*EGCANL
Trigger: CAAATTAGCACACCCTTCTCAGATGGCCACGATGTA...GGGTTTAGAAATCTTTGCCAGGTCATGGCCCACTGGATTCTGGATACTCTGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
3UTR-3UTR CAA 90 bp TCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGGCGGTCCCGGGGCCCCCAGCCCTGGAGTaGGCTCCACAATGGCTTTTC +
Preference number: 3 (lower is better)
Translates to: SRAGEVRVFALRGWAVPGPPALE*APQWLF
Trigger: GAAAAGCCATTGTGGAGCCAACTCCAGGGCTGGGGG...CCCCGGGACCGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
3UTR-3UTR CAA 90 bp CAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGGCGGCCCCCAGCCCTGGAGTaGGCTCCACAATGGCTTTTC +
Preference number: 3 (lower is better)
Translates to: QLAQEQEKSGSLLCGAGRPPALE*APQWLF
Trigger: GAAAAGCCATTGTGGAGCCAACTCCAGGGCTGGGGG...CCGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
3UTR-3UTR CAA 90 bp GTGTCAGGGCATCCTGGAGATGCCTGCATGGACCCCTCATCCACAGTCATCTCCCCCCCAGCCCTGGAGTaGGCTCCACAATGGCTTTTC +
Preference number: 3 (lower is better)
Translates to: VSGHPGDACMDPSSTVISPPALE*APQWLF
Trigger: GAAAAGCCATTGTGGAGCCAACTCCAGGGCTGGGGG...GGAGATGACTGTGGATGAGGGGTCCATGCAGGCATCTCCAGGATGCCCTGACAC
60% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
3UTR-3UTR CAA 90 bp AGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGCCCCCAGCCCTGGAGTaGGCTCCACAATGGCTTTTC +
Preference number: 3 (lower is better)
Translates to: STAGSRAGEVRVFALRGWPPALE*APQWLF
Trigger: GAAAAGCCATTGTGGAGCCAACTCCAGGGCTGGGGG...CCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
3UTR-3UTR CAA 90 bp TTCCCAGGGGGTGACCTGCTCAAGGGCATATTGCCTGACAAACCAGGCCTCAGATGGGCGGTCCCGGGGTaGAACTTGAGGGGCAGTTGT +
Preference number: 3 (lower is better)
Translates to: FPGGDLLKGILPDKPGLRWAVPG*NLRGSC
Trigger: ACAACTGCCCCTCAAGTTCAACCCCGGGACCGCCCA...TCTGAGGCCTGGTTTGTCAGGCAATATGCCCTTGAGCAGGTCACCCCCTGGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
3UTR-3UTR CAA 90 bp CATTCCCAGGGGGTGACCTGCTCAAGGGCATATTGCCTGACAAACCAGGCCTCAGAGAAGTCAGGGTCTTaGCTTTGCGGGGCTGGGCGG +
Preference number: 3 (lower is better)
Translates to: HSQGVTCSRAYCLTNQASEKSGS*LCGAGR
Trigger: CCGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCTC...TGAGGCCTGGTTTGTCAGGCAATATGCCCTTGAGCAGGTCACCCCCTGGGAATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
3UTR TCA 72 bp CTGGGCGGTCCCGGGGTTGAACTTGAGGGGCAGTTGTaGGCAGGCCTGTTTGTTCTCGGGAAGTTGGCAAAG +
Preference number: 3 (lower is better)
Translates to: LGGPGVELEGQL*AGLFVLGKLAK
Trigger: CTTTGCCAACTTCCCGAGAACAAACAGGCCTGCTCACAACTGCCCCTCAAGTTCAACCCCGGGACCGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
3UTR-3UTR CAA 90 bp GTCTCCTTCTGGGGGCTCAAGGGCTTGTTGAGCTTAGAGTCTGAGCTGGGCAGCAGACCGAGCCTTCGGTaGGTAATGGAGCAGGAATGG +
Preference number: 3 (lower is better)
Translates to: VSFWGLKGLLSLESELGSRPSLR*VMEQEW
Trigger: CCATTCCTGCTCCATTACCAACCGAAGGCTCGGTCT...GCTGCCCAGCTCAGACTCTAAGCTCAACAAGCCCTTGAGCCCCCAGAAGGAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
3UTR-3UTR CAA 90 bp GTGTCAGGGCATCCTGGAGATGCCTGCATGGACCCCTCATCCACAGTCATCTCCAGACCGAGCCTTCGGTaGGTAATGGAGCAGGAATGG +
Preference number: 3 (lower is better)
Translates to: VSGHPGDACMDPSSTVISRPSLR*VMEQEW
Trigger: CCATTCCTGCTCCATTACCAACCGAAGGCTCGGTCT...GGAGATGACTGTGGATGAGGGGTCCATGCAGGCATCTCCAGGATGCCCTGACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
3UTR-3UTR CAA 90 bp GCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGGCGGTCTCCACAGTCATCTCCTaGAGTTTCACAGCACCCCAT +
Preference number: 3 (lower is better)
Translates to: AGSRAGEVRVFALRGWAVSTVIS*SFTAPH
Trigger: ATGGGGTGCTGTGAAACTCAAGGAGATGACTGTGGA...GACCGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
3UTR-3UTR CAA 90 bp TCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGGCGGTCCCGGGGTTTGTTCTCGGGAAGTaGGCAAAGTGGAGCCTACAT +
Preference number: 3 (lower is better)
Translates to: SRAGEVRVFALRGWAVPGFVLGK*AKWSLH
Trigger: ATGTAGGCTCCACTTTGCCAACTTCCCGAGAACAAA...CCCCGGGACCGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
3UTR CCA 72 bp TTAAGACCGAGCCTTCGGTTGGTAATGGAGCAGGAATaGGAGCCTAGGACTCCTGACCCCCAGCCCTGGAGT +
Preference number: 3 (lower is better)
Translates to: LRPSLRLVMEQE*EPRTPDPQPWS
Trigger: ACTCCAGGGCTGGGGGTCAGGAGTCCTAGGCTCCCATTCCTGCTCCATTACCAACCGAAGGCTCGGTCTTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
3UTR CCA 72 bp GCGCAGCCAGTCCTAAAGCACAGTGTCAGGGCATCCTaGAGATGCCTGCATGGACCCCTCATCCACAGTCAT +
Preference number: 3 (lower is better)
Translates to: AQPVLKHSVRAS*RCLHGPLIHSH
Trigger: ATGACTGTGGATGAGGGGTCCATGCAGGCATCTCCAGGATGCCCTGACACTGTGCTTTAGGACTGGCTGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
3UTR-3UTR CAA 90 bp CATCCTGGAGATGCCTGCATGGACCCCTCATCCACAGTCATCTCCTTGAGTTTCCCCCCAGCCCTGGAGTaGGCTCCACAATGGCTTTTC +
Preference number: 3 (lower is better)
Translates to: HPGDACMDPSSTVISLSFPPALE*APQWLF
Trigger: GAAAAGCCATTGTGGAGCCAACTCCAGGGCTGGGGG...GAAACTCAAGGAGATGACTGTGGATGAGGGGTCCATGCAGGCATCTCCAGGATG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
3UTR-3UTR CAA 90 bp TCAGGGCATCCTGGAGATGCCTGCATGGACCCCTCATCCACAGTCATCTCCTTGAGACCGAGCCTTCGGTaGGTAATGGAGCAGGAATGG +
Preference number: 3 (lower is better)
Translates to: SGHPGDACMDPSSTVISLRPSLR*VMEQEW
Trigger: CCATTCCTGCTCCATTACCAACCGAAGGCTCGGTCT...CAAGGAGATGACTGTGGATGAGGGGTCCATGCAGGCATCTCCAGGATGCCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
3UTR-3UTR CAA 90 bp AGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGTGTGAGCAGGCCTGTTaGTTCTCGGGAAGTTGGCAA +
Preference number: 3 (lower is better)
Translates to: STAGSRAGEVRVFALRGWCEQAC*FSGSWQ
Trigger: TTGCCAACTTCCCGAGAACAAACAGGCCTGCTCACA...CCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
3UTR CCA 72 bp GTGGAGCCAGTCCTAAAGCACAGTGTCAGGGCATCCTaGAGATGCCTGCATGGACCCCTCATCCACAGTCAT +
Preference number: 3 (lower is better)
Translates to: VEPVLKHSVRAS*RCLHGPLIHSH
Trigger: ATGACTGTGGATGAGGGGTCCATGCAGGCATCTCCAGGATGCCCTGACACTGTGCTTTAGGACTGGCTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321374.9
ENST00000673517.1
3UTR-3UTR CAA 90 bp GTCTCCTTCTGGGGGCTCAAGGGCTTGTTGAGCTTAGAGTCTGAGCTGGGCAGCGTGAGTGTGCAAAGGTaGCCTTTGTTCCTTGCCTGT +
Preference number: 3 (lower is better)
Translates to: VSFWGLKGLLSLESELGSVSVQR*PLFLAC
Trigger: ACAGGCAAGGAACAAAGGCAACCTTTGCACACTCAC...GCTGCCCAGCTCAGACTCTAAGCTCAACAAGCCCTTGAGCCCCCAGAAGGAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
3UTR-3UTR CAA 90 bp CATCCTGGAGATGCCTGCATGGACCCCTCATCCACAGTCATCTCCTTGAGTTTCAGACCGAGCCTTCGGTaGGTAATGGAGCAGGAATGG +
Preference number: 3 (lower is better)
Translates to: HPGDACMDPSSTVISLSFRPSLR*VMEQEW
Trigger: CCATTCCTGCTCCATTACCAACCGAAGGCTCGGTCT...GAAACTCAAGGAGATGACTGTGGATGAGGGGTCCATGCAGGCATCTCCAGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
3UTR-3UTR CAA 90 bp CATTCCCAGGGGGTGACCTGCTCAAGGGCATATTGCCTGACAAACCAGGCCTCATCCACAGTCATCTCCTaGAGTTTCACAGCACCCCAT +
Preference number: 3 (lower is better)
Translates to: HSQGVTCSRAYCLTNQASSTVIS*SFTAPH
Trigger: ATGGGGTGCTGTGAAACTCAAGGAGATGACTGTGGA...TGAGGCCTGGTTTGTCAGGCAATATGCCCTTGAGCAGGTCACCCCCTGGGAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
3UTR-3UTR CAA 90 bp TTCTGGCCACGGGCAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTCCACAGTCATCTCCTaGAGTTTCACAGCACCCCAT +
Preference number: 3 (lower is better)
Translates to: FWPRAKHSWLKSRRSQGLSTVIS*SFTAPH
Trigger: ATGGGGTGCTGTGAAACTCAAGGAGATGACTGTGGA...AAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTGCCCGTGGCCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
3UTR-3UTR CAA 90 bp CAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTCCACAGTCATCTCCTaGAGTTTCACAGCACCCCAT +
Preference number: 3 (lower is better)
Translates to: QSTAGSRAGEVRVFALRGSTVIS*SFTAPH
Trigger: ATGGGGTGCTGTGAAACTCAAGGAGATGACTGTGGA...GCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
3UTR-3UTR CAA 90 bp CTGCTGAGAGTTAGCGGTCTCCTTCTGGGGGCTCAAGGGCTTGTTGAGCTTAGATGTGAGCAGGCCTGTTaGTTCTCGGGAAGTTGGCAA +
Preference number: 3 (lower is better)
Translates to: LLRVSGLLLGAQGLVELRCEQAC*FSGSWQ
Trigger: TTGCCAACTTCCCGAGAACAAACAGGCCTGCTCACA...TCTAAGCTCAACAAGCCCTTGAGCCCCCAGAAGGAGACCGCTAACTCTCAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
3UTR-3UTR CAA 90 bp TTCCCAGGGGGTGACCTGCTCAAGGGCATATTGCCTGACAAACCAGGCCTCAGAGGTTGCCTTTGTTCCTaGCCTGTTCCCTCATCCTTT +
Preference number: 3 (lower is better)
Translates to: FPGGDLLKGILPDKPGLRGCLCS*PVPSSF
Trigger: AAAGGATGAGGGAACAGGCAAGGAACAAAGGCAACC...TCTGAGGCCTGGTTTGTCAGGCAATATGCCCTTGAGCAGGTCACCCCCTGGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
3UTR-3UTR CAA 90 bp CTGAGAGTTAGCGGTCTCCTTCTGGGGGCTCAAGGGCTTGTTGAGCTTAGAGTCGTGCAAAGGTTGCCTTaGTTCCTTGCCTGTTCCCTC +
Preference number: 3 (lower is better)
Translates to: LRVSGLLLGAQGLVELRVVQRLP*FLACSL
Trigger: GAGGGAACAGGCAAGGAACAAAGGCAACCTTTGCAC...GACTCTAAGCTCAACAAGCCCTTGAGCCCCCAGAAGGAGACCGCTAACTCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
3UTR-3UTR CAA 90 bp CTGCTGAGAGTTAGCGGTCTCCTTCTGGGGGCTCAAGGGCTTGTTGAGCTTAGAGTGAGTGTGCAAAGGTaGCCTTTGTTCCTTGCCTGT +
Preference number: 3 (lower is better)
Translates to: LLRVSGLLLGAQGLVELRVSVQR*PLFLAC
Trigger: ACAGGCAAGGAACAAAGGCAACCTTTGCACACTCAC...TCTAAGCTCAACAAGCCCTTGAGCCCCCAGAAGGAGACCGCTAACTCTCAGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
3UTR-3UTR CAA 90 bp GTCTCCTTCTGGGGGCTCAAGGGCTTGTTGAGCTTAGAGTCTGAGCTGGGCAGCGAAGGGTGTGCTAATTaGAGAATCTTAGGCTCTATG +
Preference number: 3 (lower is better)
Translates to: VSFWGLKGLLSLESELGSEGCAN*RILGSM
Trigger: CATAGAGCCTAAGATTCTCAAATTAGCACACCCTTC...GCTGCCCAGCTCAGACTCTAAGCTCAACAAGCCCTTGAGCCCCCAGAAGGAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
3UTR-3UTR CAA 90 bp CTGAGAGTTAGCGGTCTCCTTCTGGGGGCTCAAGGGCTTGTTGAGCTTAGAGTCTTTGTTCTCGGGAAGTaGGCAAAGTGGAGCCTACAT +
Preference number: 3 (lower is better)
Translates to: LRVSGLLLGAQGLVELRVFVLGK*AKWSLH
Trigger: ATGTAGGCTCCACTTTGCCAACTTCCCGAGAACAAA...GACTCTAAGCTCAACAAGCCCTTGAGCCCCCAGAAGGAGACCGCTAACTCTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
3UTR CCA 72 bp GGCCTCAGAGTATCCAGAATCCAGTGGGCCATGACCTaGCAAAGATTTCTAAACCCATTTTGCCACAGCAGG +
Preference number: 3 (lower is better)
Translates to: GLRVSRIQWAMT*QRFLNPFCHSR
Trigger: CCTGCTGTGGCAAAATGGGTTTAGAAATCTTTGCCAGGTCATGGCCCACTGGATTCTGGATACTCTGAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
3UTR TCA 72 bp GGAAGTTGGCAAAGTGGAGCCTACATCGTGGCCATCTaGGAAGGGTGTGCTAATTTGAGAATCTTAGGCTCT +
Preference number: 3 (lower is better)
Translates to: GSWQSGAYIVAI*EGCANLRILGS
Trigger: AGAGCCTAAGATTCTCAAATTAGCACACCCTTCTCAGATGGCCACGATGTAGGCTCCACTTTGCCAACTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR TCA 90 bp ACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGGCGCCCAGGAGCCGCTGCTaGGCTTCTGGCCACGGGCAA +
Preference number: 4 (lower is better)
Translates to: TAGSRAGEVRVFALRGWAPRSRC*ASGHGQ
Trigger: TTGCCCGTGGCCAGAAGCTCAGCAGCGGCTCCTGGG...CGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CCA 90 bp TCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGGCGGTCCCGGGGTCTTCCTCCTCCTGCTaGGCCAGGCGGCTCCTCAGT +
Preference number: 4 (lower is better)
Translates to: SRAGEVRVFALRGWAVPGSSSSC*ARRLLS
Trigger: ACTGAGGAGCCGCCTGGCCCAGCAGGAGGAGGAAGA...CCCCGGGACCGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CCA 90 bp GGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGGCGGTCCCGCAGCAGAGCGGCCTGTaGCTGCTGGGCCTGATACAG +
Preference number: 4 (lower is better)
Translates to: GSRAGEVRVFALRGWAVPQQSGL*LLGLIQ
Trigger: CTGTATCAGGCCCAGCAGCCACAGGCCGCTCTGCTG...CGGGACCGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CCA 90 bp TGGAGCAGGAATGGGAGCCTAGGACTCCTGACCCCCAGCCCTGGAGTTGGCTCCCCTGACCCCCAGCCCTaGAGTTGGCTCCACAATGGC +
Preference number: 4 (lower is better)
Translates to: WSRNGSLGLLTPSPGVGSPDPQP*SWLHNG
Trigger: GCCATTGTGGAGCCAACTCCAGGGCTGGGGGTCAGG...GGAGCCAACTCCAGGGCTGGGGGTCAGGAGTCCTAGGCTCCCATTCCTGCTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CCA 90 bp GGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGGCGGTCCCGCCGCTGCTGAGCTTCTaGCCACGGGCAAAGCACAGC +
Preference number: 4 (lower is better)
Translates to: GSRAGEVRVFALRGWAVPPLLSF*PRAKHS
Trigger: GCTGTGCTTTGCCCGTGGCCAGAAGCTCAGCAGCGG...CGGGACCGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CCA 90 bp TGGAGCAGGAATGGGAGCCTAGGACTCCTGACCCCCAGCCCTGGAGTTGGCTCCCCGCTGCTGAGCTTCTaGCCACGGGCAAAGCACAGC +
Preference number: 4 (lower is better)
Translates to: WSRNGSLGLLTPSPGVGSPLLSF*PRAKHS
Trigger: GCTGTGCTTTGCCCGTGGCCAGAAGCTCAGCAGCGG...GGAGCCAACTCCAGGGCTGGGGGTCAGGAGTCCTAGGCTCCCATTCCTGCTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR TCA 90 bp GGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGGCGGTCCCGCAGAGAAGCTGTCAATaGGGCCTGGGGCAGCCTTGG +
Preference number: 4 (lower is better)
Translates to: GSRAGEVRVFALRGWAVPQRSCQ*GLGQPW
Trigger: CCAAGGCTGCCCCAGGCCTCATTGACAGCTTCTCTG...CGGGACCGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR TCA 90 bp CTGGCCACGGGCAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCCCAGGAGCCGCTGCTaGGCTTCTGGCCACGGGCAA +
Preference number: 4 (lower is better)
Translates to: LATGKAQLAQEQEKSGSLPRSRC*ASGHGQ
Trigger: TTGCCCGTGGCCAGAAGCTCAGCAGCGGCTCCTGGG...CAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTGCCCGTGGCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR GCA 90 bp GCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGGCGGTCGGCAGGGCCTGTTGCTaGAGAATGATGGGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: AGSRAGEVRVFALRGWAVGRACC*RMMGAC
Trigger: GCAGGCCCCCATCATTCTGCAGCAACAGGCCCTGCC...GACCGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR GCA 90 bp GGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGGCGGTCCCGCGTGTGGCCAGATCCTaGTTCTCTCGTCCCCAGCGT +
Preference number: 4 (lower is better)
Translates to: GSRAGEVRVFALRGWAVPRVARS*FSRPQR
Trigger: ACGCTGGGGACGAGAGAAGCAGGATCTGGCCACACG...CGGGACCGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CCA 90 bp CAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGGCGGTCTTCCTCCTCCTGCTaGGCCAGGCGGCTCCTCAGT +
Preference number: 4 (lower is better)
Translates to: QLAQEQEKSGSLLCGAGRSSSSC*ARRLLS
Trigger: ACTGAGGAGCCGCCTGGCCCAGCAGGAGGAGGAAGA...CCGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CCA 90 bp GGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGGCGGTCCCGACTTTGGGGGTGCGGTaGCTTCCTGCTCCACCACCT +
Preference number: 4 (lower is better)
Translates to: GSRAGEVRVFALRGWAVPTLGVR*LPAPPP
Trigger: AGGTGGTGGAGCAGGAAGCCACCGCACCCCCAAAGT...CGGGACCGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CCA 90 bp TCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGGCGGTCCCGGGGGAAGGAGGCCTGCTCTaGGGCTCAGGTCTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: SRAGEVRVFALRGWAVPGEGGLL*GSGLLR
Trigger: TCTCAGCAGACCTGAGCCCCAGAGCAGGCCTCCTTC...CCCCGGGACCGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR TCA 90 bp GCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGGCGGTCCAGAGAAGCTGTCAATaGGGCCTGGGGCAGCCTTGG +
Preference number: 4 (lower is better)
Translates to: AGSRAGEVRVFALRGWAVQRSCQ*GLGQPW
Trigger: CCAAGGCTGCCCCAGGCCTCATTGACAGCTTCTCTG...GACCGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR TCA 90 bp CAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGGCGGCAGAGAAGCTGTCAATaGGGCCTGGGGCAGCCTTGG +
Preference number: 4 (lower is better)
Translates to: QLAQEQEKSGSLLCGAGRQRSCQ*GLGQPW
Trigger: CCAAGGCTGCCCCAGGCCTCATTGACAGCTTCTCTG...CCGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR TCA 90 bp GGGAGCCTAGGACTCCTGACCCCCAGCCCTGGAGTTGGCTCCACAATGGCTTTTGACAGGATCCGGCTCTaGGCGTGTTCCAGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: GSLGLLTPSPGVGSTMAFDRIRL*ACSSLA
Trigger: GGCCAAGCTGGAACACGCTCAGAGCCGGATCCTGTC...AAAAGCCATTGTGGAGCCAACTCCAGGGCTGGGGGTCAGGAGTCCTAGGCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR TCA 90 bp TTCCCAGGGGGTGACCTGCTCAAGGGCATATTGCCTGACAAACCAGGCCTCAGACCCAGGAGCCGCTGCTaGGCTTCTGGCCACGGGCAA +
Preference number: 4 (lower is better)
Translates to: FPGGDLLKGILPDKPGLRPRSRC*ASGHGQ
Trigger: TTGCCCGTGGCCAGAAGCTCAGCAGCGGCTCCTGGG...TCTGAGGCCTGGTTTGTCAGGCAATATGCCCTTGAGCAGGTCACCCCCTGGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR TCA 90 bp CAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGGCGGGTTGAGCTTAGAGTCTaGGCTGGGCAGCAGGGGCTC +
Preference number: 4 (lower is better)
Translates to: QLAQEQEKSGSLLCGAGRVELRV*AGQQGL
Trigger: GAGCCCCTGCTGCCCAGCTCAGACTCTAAGCTCAAC...CCGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR GCA 90 bp TGGAGCAGGAATGGGAGCCTAGGACTCCTGACCCCCAGCCCTGGAGTTGGCTCCGGCGGCTCCTCAGTATaGGGTTCTCTCCTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: WSRNGSLGLLTPSPGVGSGGSSV*GSLLPG
Trigger: TCCTGGAAGGAGAGAACCGCATACTGAGGAGCCGCC...GGAGCCAACTCCAGGGCTGGGGGTCAGGAGTCCTAGGCTCCCATTCCTGCTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR GCA 90 bp TCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGGCGGTCCCGGGGAGCTTGCCCTGGTACTaGTTCAGCAGAGCGGCCTGT +
Preference number: 4 (lower is better)
Translates to: SRAGEVRVFALRGWAVPGSLPWY*FSRAAC
Trigger: ACAGGCCGCTCTGCTGAAGCAGTACCAGGGCAAGCT...CCCCGGGACCGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR GCA 90 bp ACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGGCGACCGGCAGGGCCTGTTaGTGCAGAATGATGGGGGCC +
Preference number: 4 (lower is better)
Translates to: TAGSRAGEVRVFALRGWATGRAC*CRMMGA
Trigger: GGCCCCCATCATTCTGCAGCAACAGGCCCTGCCGGT...CGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268082.4
ENST00000673214.1
CDS-3UTR GCA 90 bp AGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGCGGGCAGGGTCTCTGTaGACTCTGAGTGGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: STAGSRAGEVRVFALRGWRAGSL*TLSGLG
Trigger: GCCCAGGCCACTCAGAGTGCACAGAGACCCTGCCCG...CCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268082.4
ENST00000673214.1
CDS-3UTR GCA 90 bp GTGTCAGGGCATCCTGGAGATGCCTGCATGGACCCCTCATCCACAGTCATCTCCCGGGCAGGGTCTCTGTaGACTCTGAGTGGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: VSGHPGDACMDPSSTVISRAGSL*TLSGLG
Trigger: GCCCAGGCCACTCAGAGTGCACAGAGACCCTGCCCG...GGAGATGACTGTGGATGAGGGGTCCATGCAGGCATCTCCAGGATGCCCTGACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268082.4
ENST00000673214.1
CDS-3UTR GCA 90 bp TGGAGCAGGAATGGGAGCCTAGGACTCCTGACCCCCAGCCCTGGAGTTGGCTCCAGGGCATCCTGGAGATaGCTGCATGGACCCCTCATC +
Preference number: 4 (lower is better)
Translates to: WSRNGSLGLLTPSPGVGSRASWR*LHGPLI
Trigger: GATGAGGGGTCCATGCAGGCATCTCCAGGATGCCCT...GGAGCCAACTCCAGGGCTGGGGGTCAGGAGTCCTAGGCTCCCATTCCTGCTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR GCA 90 bp TCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGGCGGTCCCGGGGAGGGCATCCTGGAGATaGCTGCATGGACCCCTCATC +
Preference number: 4 (lower is better)
Translates to: SRAGEVRVFALRGWAVPGRASWR*LHGPLI
Trigger: GATGAGGGGTCCATGCAGGCATCTCCAGGATGCCCT...CCCCGGGACCGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR GCA 90 bp CTGGCCACGGGCAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGTCAGGGTCTTTGCTTTaGGGGGCTGGGCGGTCCCGG +
Preference number: 4 (lower is better)
Translates to: LATGKAQLAQEQEKSGSLSGSLL*GAGRSR
Trigger: CCGGGACCGCCCAGCCCCGCAAAGCAAAGACCCTGA...CAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTGCCCGTGGCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR GCA 90 bp TCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGGCGGTCCCGGGGAGAAGTCAGGGTCTTTaGTTTGCGGGGCTGGGCGGT +
Preference number: 4 (lower is better)
Translates to: SRAGEVRVFALRGWAVPGRSQGL*FAGLGG
Trigger: ACCGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCT...CCCCGGGACCGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR GCA 90 bp TCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGGCGGTCCCGGGGTCCCAGGGGGTGACCTaGTCAAGGGCATATTGCCTG +
Preference number: 4 (lower is better)
Translates to: SRAGEVRVFALRGWAVPGSQGVT*SRAYCL
Trigger: CAGGCAATATGCCCTTGAGCAGGTCACCCCCTGGGA...CCCCGGGACCGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CCA 90 bp GGGAGCCTAGGACTCCTGACCCCCAGCCCTGGAGTTGGCTCCACAATGGCTTTTTCTTCCTCCTCCTGCTaGGCCAGGCGGCTCCTCAGT +
Preference number: 4 (lower is better)
Translates to: GSLGLLTPSPGVGSTMAFSSSSC*ARRLLS
Trigger: ACTGAGGAGCCGCCTGGCCCAGCAGGAGGAGGAAGA...AAAAGCCATTGTGGAGCCAACTCCAGGGCTGGGGGTCAGGAGTCCTAGGCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CCA 90 bp GCTTCTGGCCACGGGCAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTCTTCCTCCTCCTGCTaGGCCAGGCGGCTCCTCAGT +
Preference number: 4 (lower is better)
Translates to: ASGHGQSTAGSRAGEVRVSSSSC*ARRLLS
Trigger: ACTGAGGAGCCGCCTGGCCCAGCAGGAGGAGGAAGA...GACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTGCCCGTGGCCAGAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CCA 90 bp GGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGGCGGTCCCGATGGACACCGTGTTCTaGGCCTCACTGGCTTTGCCC +
Preference number: 4 (lower is better)
Translates to: GSRAGEVRVFALRGWAVPMDTVF*ASLALP
Trigger: GGGCAAAGCCAGTGAGGCCCAGAACACGGTGTCCAT...CGGGACCGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CCA 90 bp GCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGGCGGTCGCTCCTGCAGCCGTGTaGCCAGATCCTGCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: AGSRAGEVRVFALRGWAVAPAAV*PDPASL
Trigger: GAGAGAAGCAGGATCTGGCCACACGGCTGCAGGAGC...GACCGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CCA 90 bp GCTTCTGGCCACGGGCAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCCCTGACCCCCAGCCCTaGAGTTGGCTCCACAATGGC +
Preference number: 4 (lower is better)
Translates to: ASGHGQSTAGSRAGEVRVPDPQP*SWLHNG
Trigger: GCCATTGTGGAGCCAACTCCAGGGCTGGGGGTCAGG...GACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTGCCCGTGGCCAGAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CCA 90 bp GGGAGCCTAGGACTCCTGACCCCCAGCCCTGGAGTTGGCTCCACAATGGCTTTTTTTGCTTTGCGGGGCTaGGCGGTCCCGGGGTTGAAC +
Preference number: 4 (lower is better)
Translates to: GSLGLLTPSPGVGSTMAFFALRG*AVPGLN
Trigger: GTTCAACCCCGGGACCGCCCAGCCCCGCAAAGCAAA...AAAAGCCATTGTGGAGCCAACTCCAGGGCTGGGGGTCAGGAGTCCTAGGCTCCC
62% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CCA 90 bp GCTTCTGGCCACGGGCAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTaGGCGGTCCCGGGGTTGAAC +
Preference number: 4 (lower is better)
Translates to: ASGHGQSTAGSRAGEVRVFALRG*AVPGLN
Trigger: GTTCAACCCCGGGACCGCCCAGCCCCGCAAAGCAAA...GACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTGCCCGTGGCCAGAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR TCA 90 bp GCTTCTGGCCACGGGCAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTGTGGCTGCTGGGCCTaGTACAGAAGGAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: ASGHGQSTAGSRAGEVRVCGCWA*YRRSSS
Trigger: GGAGCTGCTCCTTCTGTATCAGGCCCAGCAGCCACA...GACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTGCCCGTGGCCAGAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR TCA 90 bp GTGTCAGGGCATCCTGGAGATGCCTGCATGGACCCCTCATCCACAGTCATCTCCCCTGTTGCTGCAGAATaGTGGGGGCCTGCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: VSGHPGDACMDPSSTVISPVAAE*WGPAGG
Trigger: GCCACCAGCAGGCCCCCATCATTCTGCAGCAACAGG...GGAGATGACTGTGGATGAGGGGTCCATGCAGGCATCTCCAGGATGCCCTGACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR TCA 90 bp AGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGGGTCTCTGTGCACTCTaGGTGGCCTGGGCCATGCGT +
Preference number: 4 (lower is better)
Translates to: STAGSRAGEVRVFALRGWGLCAL*VAWAMR
Trigger: ACGCATGGCCCAGGCCACTCAGAGTGCACAGAGACC...CCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268082.4
ENST00000673214.1
CDS-3UTR TCA 90 bp CTGCTGAGAGTTAGCGGTCTCCTTCTGGGGGCTCAAGGGCTTGTTGAGCTTAGACCCAGGAGCCGCTGCTaGGCTTCTGGCCACGGGCAA +
Preference number: 4 (lower is better)
Translates to: LLRVSGLLLGAQGLVELRPRSRC*ASGHGQ
Trigger: TTGCCCGTGGCCAGAAGCTCAGCAGCGGCTCCTGGG...TCTAAGCTCAACAAGCCCTTGAGCCCCCAGAAGGAGACCGCTAACTCTCAGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR GCA 90 bp GCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGGCGGTCTCTCTCCTTCCAGGATaGTGGCCTGTCTCCGCAGAG +
Preference number: 4 (lower is better)
Translates to: AGSRAGEVRVFALRGWAVSLLPG*WPVSAE
Trigger: CTCTGCGGAGACAGGCCAGCATCCTGGAAGGAGAGA...GACCGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR GCA 90 bp CAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGGCGGTCTCTCCTTCCAGGATaGTGGCCTGTCTCCGCAGAG +
Preference number: 4 (lower is better)
Translates to: QLAQEQEKSGSLLCGAGRSLLPG*WPVSAE
Trigger: CTCTGCGGAGACAGGCCAGCATCCTGGAAGGAGAGA...CCGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR GCA 90 bp GCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGGCGGTCGGCGGCTCCTCAGTATaGGGTTCTCTCCTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: AGSRAGEVRVFALRGWAVGGSSV*GSLLPG
Trigger: TCCTGGAAGGAGAGAACCGCATACTGAGGAGCCGCC...GACCGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR GCA 90 bp CAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGGCGGAGCTTGCCCTGGTACTaGTTCAGCAGAGCGGCCTGT +
Preference number: 4 (lower is better)
Translates to: QLAQEQEKSGSLLCGAGRSLPWY*FSRAAC
Trigger: ACAGGCCGCTCTGCTGAAGCAGTACCAGGGCAAGCT...CCGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR GCA 90 bp TCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGGCGGTCCCGGGGAGCGCCTTCATCTTCTaGAGCTTGCCCTGGTACTGC +
Preference number: 4 (lower is better)
Translates to: SRAGEVRVFALRGWAVPGSAFIF*SLPWYC
Trigger: GCAGTACCAGGGCAAGCTGCAGAAGATGAAGGCGCT...CCCCGGGACCGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR GCA 90 bp TGGAGCAGGAATGGGAGCCTAGGACTCCTGACCCCCAGCCCTGGAGTTGGCTCCATCACCTTCTCTTGGTaGCGCACAGTCTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: WSRNGSLGLLTPSPGVGSITFSW*RTVSSS
Trigger: GCTGGAGGAGACTGTGCGGCACCAAGAGAAGGTGAT...GGAGCCAACTCCAGGGCTGGGGGTCAGGAGTCCTAGGCTCCCATTCCTGCTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR GCA 90 bp GGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGGCGGTCCCGAGAATGATGGGGGCCTaGTGGTGGCGGTTCTTATCC +
Preference number: 4 (lower is better)
Translates to: GSRAGEVRVFALRGWAVPRMMGA*WWRFLS
Trigger: GGATAAGAACCGCCACCAGCAGGCCCCCATCATTCT...CGGGACCGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR GCA 90 bp GTGTCAGGGCATCCTGGAGATGCCTGCATGGACCCCTCATCCACAGTCATCTCCACCGGCAGGGCCTGTTaGTGCAGAATGATGGGGGCC +
Preference number: 4 (lower is better)
Translates to: VSGHPGDACMDPSSTVISTGRAC*CRMMGA
Trigger: GGCCCCCATCATTCTGCAGCAACAGGCCCTGCCGGT...GGAGATGACTGTGGATGAGGGGTCCATGCAGGCATCTCCAGGATGCCCTGACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268082.4
ENST00000673214.1
CDS-3UTR GCA 90 bp GCTTCTGGCCACGGGCAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCCGTGTGGCCAGATCCTaGTTCTCTCGTCCCCAGCGT +
Preference number: 4 (lower is better)
Translates to: ASGHGQSTAGSRAGEVRVRVARS*FSRPQR
Trigger: ACGCTGGGGACGAGAGAAGCAGGATCTGGCCACACG...GACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTGCCCGTGGCCAGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR GCA 90 bp GCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGGCGGTCAGGGCATCCTGGAGATaGCTGCATGGACCCCTCATC +
Preference number: 4 (lower is better)
Translates to: AGSRAGEVRVFALRGWAVRASWR*LHGPLI
Trigger: GATGAGGGGTCCATGCAGGCATCTCCAGGATGCCCT...GACCGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR GCA 90 bp AAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGTCAGGGTCTTTGCTTTaGGGGGCTGGGCGGTCCCGG +
Preference number: 4 (lower is better)
Translates to: KHSWLKSRRSQGLCFAGLSGSLL*GAGRSR
Trigger: CCGGGACCGCCCAGCCCCGCAAAGCAAAGACCCTGA...CAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR GCA 90 bp CAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTCAGGGTCTTTGCTTTaGGGGGCTGGGCGGTCCCGG +
Preference number: 4 (lower is better)
Translates to: QSTAGSRAGEVRVFALRGSGSLL*GAGRSR
Trigger: CCGGGACCGCCCAGCCCCGCAAAGCAAAGACCCTGA...GCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR GCA 90 bp CATTCCCAGGGGGTGACCTGCTCAAGGGCATATTGCCTGACAAACCAGGCCTCATCAGGGTCTTTGCTTTaGGGGGCTGGGCGGTCCCGG +
Preference number: 4 (lower is better)
Translates to: HSQGVTCSRAYCLTNQASSGSLL*GAGRSR
Trigger: CCGGGACCGCCCAGCCCCGCAAAGCAAAGACCCTGA...TGAGGCCTGGTTTGTCAGGCAATATGCCCTTGAGCAGGTCACCCCCTGGGAATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR GCA 90 bp TTCTGGCCACGGGCAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTCAGGGTCTTTGCTTTaGGGGGCTGGGCGGTCCCGG +
Preference number: 4 (lower is better)
Translates to: FWPRAKHSWLKSRRSQGLSGSLL*GAGRSR
Trigger: CCGGGACCGCCCAGCCCCGCAAAGCAAAGACCCTGA...AAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTGCCCGTGGCCAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR GCA 90 bp GCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGGCGGTCAGAAGTCAGGGTCTTTaGTTTGCGGGGCTGGGCGGT +
Preference number: 4 (lower is better)
Translates to: AGSRAGEVRVFALRGWAVRSQGL*FAGLGG
Trigger: ACCGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCT...GACCGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR GCA 90 bp CAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGGCGGTCCAGCTCTGAGGGCTaGTTGAGGTCCATGGAGTGG +
Preference number: 4 (lower is better)
Translates to: QLAQEQEKSGSLLCGAGRSSSEG*LRSMEW
Trigger: CCACTCCATGGACCTCAAGCAGCCCTCAGAGCTGGA...CCGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CCA 90 bp TTGGTAATGGAGCAGGAATGGGAGCCTAGGACTCCTGACCCCCAGCCCTGGAGTTCTTCCTCCTCCTGCTaGGCCAGGCGGCTCCTCAGT +
Preference number: 4 (lower is better)
Translates to: LVMEQEWEPRTPDPQPWSSSSSC*ARRLLS
Trigger: ACTGAGGAGCCGCCTGGCCCAGCAGGAGGAGGAAGA...ACTCCAGGGCTGGGGGTCAGGAGTCCTAGGCTCCCATTCCTGCTCCATTACCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CCA 90 bp TCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGGCGGTCCCGGGGCCCCAGCCCTGGAGTTaGCTCCACAATGGCTTTTCT +
Preference number: 4 (lower is better)
Translates to: SRAGEVRVFALRGWAVPGPQPWS*LHNGFS
Trigger: AGAAAAGCCATTGTGGAGCCAACTCCAGGGCTGGGG...CCCCGGGACCGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CCA 90 bp TGGAGCAGGAATGGGAGCCTAGGACTCCTGACCCCCAGCCCTGGAGTTGGCTCCCTGGAGATGCCTGCATaGACCCCTCATCCACAGTCA +
Preference number: 4 (lower is better)
Translates to: WSRNGSLGLLTPSPGVGSLEMPA*TPHPQS
Trigger: TGACTGTGGATGAGGGGTCCATGCAGGCATCTCCAG...GGAGCCAACTCCAGGGCTGGGGGTCAGGAGTCCTAGGCTCCCATTCCTGCTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CCA 90 bp AGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGTTTGCTTTGCGGGGCTaGGCGGTCCCGGGGTTGAAC +
Preference number: 4 (lower is better)
Translates to: STAGSRAGEVRVFALRGWFALRG*AVPGLN
Trigger: GTTCAACCCCGGGACCGCCCAGCCCCGCAAAGCAAA...CCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CCA 90 bp GTGTCAGGGCATCCTGGAGATGCCTGCATGGACCCCTCATCCACAGTCATCTCCGGTGAGGGCACTCTGTaGTGTGCAAAGCGGGGTGCG +
Preference number: 4 (lower is better)
Translates to: VSGHPGDACMDPSSTVISGEGTL*CAKRGA
Trigger: CGCACCCCGCTTTGCACACCACAGAGTGCCCTCACC...GGAGATGACTGTGGATGAGGGGTCCATGCAGGCATCTCCAGGATGCCCTGACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CCA 90 bp TGGAGCAGGAATGGGAGCCTAGGACTCCTGACCCCCAGCCCTGGAGTTGGCTCCTTAGCGGTCTCCTTCTaGGGGCTCAAGGGCTTGTTG +
Preference number: 4 (lower is better)
Translates to: WSRNGSLGLLTPSPGVGSLAVSF*GLKGLL
Trigger: CAACAAGCCCTTGAGCCCCCAGAAGGAGACCGCTAA...GGAGCCAACTCCAGGGCTGGGGGTCAGGAGTCCTAGGCTCCCATTCCTGCTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
3UTR CAA 72 bp GAGTTAGCGGTCTCCTTCTGGGGGCTCAAGGGCTTGTaGAGCTTAGAGTCTGAGCTGGGCAGCAGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: ELAVSFWGLKGL*SLESELGSRGS
Trigger: GGAGCCCCTGCTGCCCAGCTCAGACTCTAAGCTCAACAAGCCCTTGAGCCCCCAGAAGGAGACCGCTAACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR TCA 90 bp GTGTCAGGGCATCCTGGAGATGCCTGCATGGACCCCTCATCCACAGTCATCTCCTGTGGCTGCTGGGCCTaGTACAGAAGGAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: VSGHPGDACMDPSSTVISCGCWA*YRRSSS
Trigger: GGAGCTGCTCCTTCTGTATCAGGCCCAGCAGCCACA...GGAGATGACTGTGGATGAGGGGTCCATGCAGGCATCTCCAGGATGCCCTGACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR TCA 90 bp CTGGCCACGGGCAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGTGTGGCTGCTGGGCCTaGTACAGAAGGAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LATGKAQLAQEQEKSGSLCGCWA*YRRSSS
Trigger: GGAGCTGCTCCTTCTGTATCAGGCCCAGCAGCCACA...CAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTGCCCGTGGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR TCA 90 bp TCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGGCGGTCCCGGGGCCACAGTCATCTCCTTaGGTTTCACAGCACCCCATG +
Preference number: 4 (lower is better)
Translates to: SRAGEVRVFALRGWAVPGPQSSP*VSQHPM
Trigger: CATGGGGTGCTGTGAAACTCAAGGAGATGACTGTGG...CCCCGGGACCGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR TCA 90 bp GCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGGCGGTCAAGCTACTCTGCCCATaGGCGCAGCCAGTCCTAAAG +
Preference number: 4 (lower is better)
Translates to: AGSRAGEVRVFALRGWAVKLLCP*AQPVLK
Trigger: CTTTAGGACTGGCTGCGCTCATGGGCAGAGTAGCTT...GACCGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR TCA 90 bp GTCTCCTTCTGGGGGCTCAAGGGCTTGTTGAGCTTAGAGTCTGAGCTGGGCAGCGGGGCTCAGGTCTGCTaGGAGTTAGCGGTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: VSFWGLKGLLSLESELGSGAQVC*ELAVSF
Trigger: GAAGGAGACCGCTAACTCTCAGCAGACCTGAGCCCC...GCTGCCCAGCTCAGACTCTAAGCTCAACAAGCCCTTGAGCCCCCAGAAGGAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR GCA 90 bp GGGAGCCTAGGACTCCTGACCCCCAGCCCTGGAGTTGGCTCCACAATGGCTTTTGGCGGCTCCTCAGTATaGGGTTCTCTCCTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: GSLGLLTPSPGVGSTMAFGGSSV*GSLLPG
Trigger: TCCTGGAAGGAGAGAACCGCATACTGAGGAGCCGCC...AAAAGCCATTGTGGAGCCAACTCCAGGGCTGGGGGTCAGGAGTCCTAGGCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR GCA 90 bp GCTTCTGGCCACGGGCAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCGGCGGCTCCTCAGTATaGGGTTCTCTCCTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: ASGHGQSTAGSRAGEVRVGGSSV*GSLLPG
Trigger: TCCTGGAAGGAGAGAACCGCATACTGAGGAGCCGCC...GACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTGCCCGTGGCCAGAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR GCA 90 bp CAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGGCGGAGCGCCTTCATCTTCTaGAGCTTGCCCTGGTACTGC +
Preference number: 4 (lower is better)
Translates to: QLAQEQEKSGSLLCGAGRSAFIF*SLPWYC
Trigger: GCAGTACCAGGGCAAGCTGCAGAAGATGAAGGCGCT...CCGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR GCA 90 bp CAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGGCGGATCACCTTCTCTTGGTaGCGCACAGTCTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: QLAQEQEKSGSLLCGAGRITFSW*RTVSSS
Trigger: GCTGGAGGAGACTGTGCGGCACCAAGAGAAGGTGAT...CCGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR GCA 90 bp TGGAGCAGGAATGGGAGCCTAGGACTCCTGACCCCCAGCCCTGGAGTTGGCTCCCAGCTTCGCGTTTTCTaGCAGCAGCACCGAGTAAAG +
Preference number: 4 (lower is better)
Translates to: WSRNGSLGLLTPSPGVGSQLRVF*QQHRVK
Trigger: CTTTACTCGGTGCTGCTGGCAGAAAACGCGAAGCTG...GGAGCCAACTCCAGGGCTGGGGGTCAGGAGTCCTAGGCTCCCATTCCTGCTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR GCA 90 bp CCGGGGTTGAACTTGAGGGGCAGTTGTGAGCAGGCCTGTTTGTTCTCGGGAAGTGGCAGGGCCTGTTGCTaGAGAATGATGGGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: PGLNLRGSCEQACLFSGSGRACC*RMMGAC
Trigger: GCAGGCCCCCATCATTCTGCAGCAACAGGCCCTGCC...ACTTCCCGAGAACAAACAGGCCTGCTCACAACTGCCCCTCAAGTTCAACCCCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR GCA 90 bp GCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGGCGGTCCATCCTGGAGATGCCTaGATGGACCCCTCATCCACA +
Preference number: 4 (lower is better)
Translates to: AGSRAGEVRVFALRGWAVHPGDA*MDPSST
Trigger: TGTGGATGAGGGGTCCATGCAGGCATCTCCAGGATG...GACCGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR GCA 90 bp GTCTCCTTCTGGGGGCTCAAGGGCTTGTTGAGCTTAGAGTCTGAGCTGGGCAGCGGGCACTCTGTGGTGTaGAAAGCGGGGTGCGTGAGT +
Preference number: 4 (lower is better)
Translates to: VSFWGLKGLLSLESELGSGHSVV*KAGCVS
Trigger: ACTCACGCACCCCGCTTTGCACACCACAGAGTGCCC...GCTGCCCAGCTCAGACTCTAAGCTCAACAAGCCCTTGAGCCCCCAGAAGGAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR GCA 90 bp AAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGTCCGGCAGGGCCTGTTaGTGCAGAATGATGGGGGCC +
Preference number: 4 (lower is better)
Translates to: KHSWLKSRRSQGLCFAGLSGRAC*CRMMGA
Trigger: GGCCCCCATCATTCTGCAGCAACAGGCCCTGCCGGA...CAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673517.1
CDS-3UTR GCA 90 bp TCAGGGCATCCTGGAGATGCCTGCATGGACCCCTCATCCACAGTCATCTCCTTGTCCGGCAGGGCCTGTTaGTGCAGAATGATGGGGGCC +
Preference number: 4 (lower is better)
Translates to: SGHPGDACMDPSSTVISLSGRAC*CRMMGA
Trigger: GGCCCCCATCATTCTGCAGCAACAGGCCCTGCCGGA...CAAGGAGATGACTGTGGATGAGGGGTCCATGCAGGCATCTCCAGGATGCCCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673517.1
CDS-3UTR CCA 90 bp GCTTCTGGCCACGGGCAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCCTCCTTCCAGGATGCTaGCCTGTCTCCGCAGAGACA +
Preference number: 4 (lower is better)
Translates to: ASGHGQSTAGSRAGEVRVLLPGC*PVSAET
Trigger: TGTCTCTGCGGAGACAGGCCAGCATCCTGGAAGGAG...GACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTGCCCGTGGCCAGAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CCA 90 bp GGGAGCCTAGGACTCCTGACCCCCAGCCCTGGAGTTGGCTCCACAATGGCTTTTATGGACACCGTGTTCTaGGCCTCACTGGCTTTGCCC +
Preference number: 4 (lower is better)
Translates to: GSLGLLTPSPGVGSTMAFMDTVF*ASLALP
Trigger: GGGCAAAGCCAGTGAGGCCCAGAACACGGTGTCCAT...AAAAGCCATTGTGGAGCCAACTCCAGGGCTGGGGGTCAGGAGTCCTAGGCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CCA 90 bp ACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGGCGATGGACACCGTGTTCTaGGCCTCACTGGCTTTGCCC +
Preference number: 4 (lower is better)
Translates to: TAGSRAGEVRVFALRGWAMDTVF*ASLALP
Trigger: GGGCAAAGCCAGTGAGGCCCAGAACACGGTGTCCAT...CGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CCA 90 bp TCAGGGCATCCTGGAGATGCCTGCATGGACCCCTCATCCACAGTCATCTCCTTGCAGCAGAGCGGCCTGTaGCTGCTGGGCCTGATACAG +
Preference number: 4 (lower is better)
Translates to: SGHPGDACMDPSSTVISLQQSGL*LLGLIQ
Trigger: CTGTATCAGGCCCAGCAGCCACAGGCCGCTCTGCTG...CAAGGAGATGACTGTGGATGAGGGGTCCATGCAGGCATCTCCAGGATGCCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CCA 90 bp TTGGTAATGGAGCAGGAATGGGAGCCTAGGACTCCTGACCCCCAGCCCTGGAGTATGGGGGCCTGCTGGTaGCGGTTCTTATCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LVMEQEWEPRTPDPQPWSMGACW*RFLSSS
Trigger: GGAGCTGGATAAGAACCGCCACCAGCAGGCCCCCAT...ACTCCAGGGCTGGGGGTCAGGAGTCCTAGGCTCCCATTCCTGCTCCATTACCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CCA 90 bp GCTTCTGGCCACGGGCAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCATGATGGGGGCCTGCTaGTGGCGGTTCTTATCCAGC +
Preference number: 4 (lower is better)
Translates to: ASGHGQSTAGSRAGEVRVMMGAC*WRFLSS
Trigger: GCTGGATAAGAACCGCCACCAGCAGGCCCCCATCAT...GACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTGCCCGTGGCCAGAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CCA 90 bp ACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGGCGATGATGGGGGCCTGCTaGTGGCGGTTCTTATCCAGC +
Preference number: 4 (lower is better)
Translates to: TAGSRAGEVRVFALRGWAMMGAC*WRFLSS
Trigger: GCTGGATAAGAACCGCCACCAGCAGGCCCCCATCAT...CGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CCA 90 bp TCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGGCGGTCCCGGGGGCTGAGTCCTCTAACTaGCTTTCCAGGGACAGGATC +
Preference number: 4 (lower is better)
Translates to: SRAGEVRVFALRGWAVPGAESSN*LSRDRI
Trigger: GATCCTGTCCCTGGAAAGCCAGTTAGAGGACTCAGC...CCCCGGGACCGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CCA 90 bp GTCTCCTTCTGGGGGCTCAAGGGCTTGTTGAGCTTAGAGTCTGAGCTGGGCAGCGCTCCTGCAGCCGTGTaGCCAGATCCTGCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: VSFWGLKGLLSLESELGSAPAAV*PDPASL
Trigger: GAGAGAAGCAGGATCTGGCCACACGGCTGCAGGAGC...GCTGCCCAGCTCAGACTCTAAGCTCAACAAGCCCTTGAGCCCCCAGAAGGAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CCA 90 bp GTGTCAGGGCATCCTGGAGATGCCTGCATGGACCCCTCATCCACAGTCATCTCCGCTCCTGCAGCCGTGTaGCCAGATCCTGCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: VSGHPGDACMDPSSTVISAPAAV*PDPASL
Trigger: GAGAGAAGCAGGATCTGGCCACACGGCTGCAGGAGC...GGAGATGACTGTGGATGAGGGGTCCATGCAGGCATCTCCAGGATGCCCTGACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CCA 90 bp GTCTCCTTCTGGGGGCTCAAGGGCTTGTTGAGCTTAGAGTCTGAGCTGGGCAGCACTTTGGGGGTGCGGTaGCTTCCTGCTCCACCACCT +
Preference number: 4 (lower is better)
Translates to: VSFWGLKGLLSLESELGSTLGVR*LPAPPP
Trigger: AGGTGGTGGAGCAGGAAGCCACCGCACCCCCAAAGT...GCTGCCCAGCTCAGACTCTAAGCTCAACAAGCCCTTGAGCCCCCAGAAGGAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CCA 90 bp CAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGGCGGCCCCAGCCCTGGAGTTaGCTCCACAATGGCTTTTCT +
Preference number: 4 (lower is better)
Translates to: QLAQEQEKSGSLLCGAGRPQPWS*LHNGFS
Trigger: AGAAAAGCCATTGTGGAGCCAACTCCAGGGCTGGGG...CCGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CCA 90 bp GCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGGCGGTCCCCCAGCCCTGGAGTTaGCTCCACAATGGCTTTTCT +
Preference number: 4 (lower is better)
Translates to: AGSRAGEVRVFALRGWAVPQPWS*LHNGFS
Trigger: AGAAAAGCCATTGTGGAGCCAACTCCAGGGCTGGGG...GACCGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CCA 90 bp TCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGGCGGTCCCGGGGGTAATGGAGCAGGAATaGGAGCCTAGGACTCCTGAC +
Preference number: 4 (lower is better)
Translates to: SRAGEVRVFALRGWAVPGVMEQE*EPRTPD
Trigger: GTCAGGAGTCCTAGGCTCCCATTCCTGCTCCATTAC...CCCCGGGACCGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CCA 90 bp ACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGGCGAGTGTCAGGGCATCCTaGAGATGCCTGCATGGACCC +
Preference number: 4 (lower is better)
Translates to: TAGSRAGEVRVFALRGWASVRAS*RCLHGP
Trigger: GGGTCCATGCAGGCATCTCCAGGATGCCCTGACACT...CGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CCA 90 bp GGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGGCGGTCCCGGGGAAGTTGGCAAAGTaGAGCCTACATCGTGGCCAT +
Preference number: 4 (lower is better)
Translates to: GSRAGEVRVFALRGWAVPGKLAK*SLHRGH
Trigger: ATGGCCACGATGTAGGCTCCACTTTGCCAACTTCCC...CGGGACCGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CCA 90 bp CGGGCAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGTTTGCTTTGCGGGGCTaGGCGGTCCCGGGGTTGAAC +
Preference number: 4 (lower is better)
Translates to: RAKHSWLKSRRSQGLCFAFALRG*AVPGLN
Trigger: GTTCAACCCCGGGACCGCCCAGCCCCGCAAAGCAAA...CGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTGCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CCA 90 bp TCAGGGCATCCTGGAGATGCCTGCATGGACCCCTCATCCACAGTCATCTCCTTGTTTGCTTTGCGGGGCTaGGCGGTCCCGGGGTTGAAC +
Preference number: 4 (lower is better)
Translates to: SGHPGDACMDPSSTVISLFALRG*AVPGLN
Trigger: GTTCAACCCCGGGACCGCCCAGCCCCGCAAAGCAAA...CAAGGAGATGACTGTGGATGAGGGGTCCATGCAGGCATCTCCAGGATGCCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CCA 90 bp GCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGGCGGTCCGGGCAAAGCACAGCTaGCTCAAGAGCAGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: AGSRAGEVRVFALRGWAVRAKHS*LKSRRS
Trigger: ACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTGCCCG...GACCGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CCA 90 bp TCAGGGCATCCTGGAGATGCCTGCATGGACCCCTCATCCACAGTCATCTCCTTGCCGCTGCTGAGCTTCTaGCCACGGGCAAAGCACAGC +
Preference number: 4 (lower is better)
Translates to: SGHPGDACMDPSSTVISLPLLSF*PRAKHS
Trigger: GCTGTGCTTTGCCCGTGGCCAGAAGCTCAGCAGCGG...CAAGGAGATGACTGTGGATGAGGGGTCCATGCAGGCATCTCCAGGATGCCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CCA 90 bp CAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCCCGCTGCTGAGCTTCTaGCCACGGGCAAAGCACAGC +
Preference number: 4 (lower is better)
Translates to: QSTAGSRAGEVRVFALRGPLLSF*PRAKHS
Trigger: GCTGTGCTTTGCCCGTGGCCAGAAGCTCAGCAGCGG...GCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CCA 90 bp CAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCGGTGAGGGCACTCTGTaGTGTGCAAAGCGGGGTGCG +
Preference number: 4 (lower is better)
Translates to: QSTAGSRAGEVRVFALRGGEGTL*CAKRGA
Trigger: CGCACCCCGCTTTGCACACCACAGAGTGCCCTCACC...GCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CCA 90 bp CATTCCCAGGGGGTGACCTGCTCAAGGGCATATTGCCTGACAAACCAGGCCTCAGGTGAGGGCACTCTGTaGTGTGCAAAGCGGGGTGCG +
Preference number: 4 (lower is better)
Translates to: HSQGVTCSRAYCLTNQASGEGTL*CAKRGA
Trigger: CGCACCCCGCTTTGCACACCACAGAGTGCCCTCACC...TGAGGCCTGGTTTGTCAGGCAATATGCCCTTGAGCAGGTCACCCCCTGGGAATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CCA 90 bp CTGGCCACGGGCAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGGAAGGAGGCCTGCTCTaGGGCTCAGGTCTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: LATGKAQLAQEQEKSGSLEGGLL*GSGLLR
Trigger: TCTCAGCAGACCTGAGCCCCAGAGCAGGCCTCCTTC...CAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTGCCCGTGGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR TCA 90 bp AAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGCAGAGAAGCTGTCAATaGGGCCTGGGGCAGCCTTGG +
Preference number: 4 (lower is better)
Translates to: KHSWLKSRRSQGLCFAGLQRSCQ*GLGQPW
Trigger: CCAAGGCTGCCCCAGGCCTCATTGACAGCTTCTCTG...CAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR TCA 90 bp CCGGGGTTGAACTTGAGGGGCAGTTGTGAGCAGGCCTGTTTGTTCTCGGGAAGTTGTGGCTGCTGGGCCTaGTACAGAAGGAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: PGLNLRGSCEQACLFSGSCGCWA*YRRSSS
Trigger: GGAGCTGCTCCTTCTGTATCAGGCCCAGCAGCCACA...ACTTCCCGAGAACAAACAGGCCTGCTCACAACTGCCCCTCAAGTTCAACCCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR TCA 90 bp CTGAGAGTTAGCGGTCTCCTTCTGGGGGCTCAAGGGCTTGTTGAGCTTAGAGTCGGTCTCTGTGCACTCTaGGTGGCCTGGGCCATGCGT +
Preference number: 4 (lower is better)
Translates to: LRVSGLLLGAQGLVELRVGLCAL*VAWAMR
Trigger: ACGCATGGCCCAGGCCACTCAGAGTGCACAGAGACC...GACTCTAAGCTCAACAAGCCCTTGAGCCCCCAGAAGGAGACCGCTAACTCTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268082.4
ENST00000673214.1
CDS-3UTR TCA 90 bp GGGAGCCTAGGACTCCTGACCCCCAGCCCTGGAGTTGGCTCCACAATGGCTTTTCTTGAGGGGCAGTTGTaGGCAGGCCTGTTTGTTCTC +
Preference number: 4 (lower is better)
Translates to: GSLGLLTPSPGVGSTMAFLEGQL*AGLFVL
Trigger: GAGAACAAACAGGCCTGCTCACAACTGCCCCTCAAG...AAAAGCCATTGTGGAGCCAACTCCAGGGCTGGGGGTCAGGAGTCCTAGGCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR TCA 90 bp TTCTGGCCACGGGCAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTGTTGAGCTTAGAGTCTaGGCTGGGCAGCAGGGGCTC +
Preference number: 4 (lower is better)
Translates to: FWPRAKHSWLKSRRSQGLVELRV*AGQQGL
Trigger: GAGCCCCTGCTGCCCAGCTCAGACTCTAAGCTCAAC...AAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTGCCCGTGGCCAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR TCA 90 bp CAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCGTTGAGCTTAGAGTCTaGGCTGGGCAGCAGGGGCTC +
Preference number: 4 (lower is better)
Translates to: QSTAGSRAGEVRVFALRGVELRV*AGQQGL
Trigger: GAGCCCCTGCTGCCCAGCTCAGACTCTAAGCTCAAC...GCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR TCA 90 bp TTCTGGCCACGGGCAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTGGGGCTCAGGTCTGCTaGGAGTTAGCGGTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: FWPRAKHSWLKSRRSQGLGAQVC*ELAVSF
Trigger: GAAGGAGACCGCTAACTCTCAGCAGACCTGAGCCCC...AAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTGCCCGTGGCCAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR TCA 90 bp TTCCCAGGGGGTGACCTGCTCAAGGGCATATTGCCTGACAAACCAGGCCTCAGAGGGGCTCAGGTCTGCTaGGAGTTAGCGGTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: FPGGDLLKGILPDKPGLRGAQVC*ELAVSF
Trigger: GAAGGAGACCGCTAACTCTCAGCAGACCTGAGCCCC...TCTGAGGCCTGGTTTGTCAGGCAATATGCCCTTGAGCAGGTCACCCCCTGGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR GCA 90 bp TGGAGCAGGAATGGGAGCCTAGGACTCCTGACCCCCAGCCCTGGAGTTGGCTCCAGCTCATTCTGCAAATaGTGCACCCTGTCCCTCAGT +
Preference number: 4 (lower is better)
Translates to: WSRNGSLGLLTPSPGVGSSSFCK*CTLSLS
Trigger: ACTGAGGGACAGGGTGCAGCATTTGCAGAATGAGCT...GGAGCCAACTCCAGGGCTGGGGGTCAGGAGTCCTAGGCTCCCATTCCTGCTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR GCA 90 bp TGGAGCAGGAATGGGAGCCTAGGACTCCTGACCCCCAGCCCTGGAGTTGGCTCCCGAATCAGCTCATTCTaGAAATGCTGCACCCTGTCC +
Preference number: 4 (lower is better)
Translates to: WSRNGSLGLLTPSPGVGSRISSF*KCCTLS
Trigger: GGACAGGGTGCAGCATTTGCAGAATGAGCTGATTCG...GGAGCCAACTCCAGGGCTGGGGGTCAGGAGTCCTAGGCTCCCATTCCTGCTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR GCA 90 bp AGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGAGCTTGCCCTGGTACTaGTTCAGCAGAGCGGCCTGT +
Preference number: 4 (lower is better)
Translates to: STAGSRAGEVRVFALRGWSLPWY*FSRAAC
Trigger: ACAGGCCGCTCTGCTGAAGCAGTACCAGGGCAAGCT...CCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR GCA 90 bp ACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGGCGATCACCTTCTCTTGGTaGCGCACAGTCTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: TAGSRAGEVRVFALRGWAITFSW*RTVSSS
Trigger: GCTGGAGGAGACTGTGCGGCACCAAGAGAAGGTGAT...CGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR GCA 90 bp GCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGGCGGTCCAGCTTCGCGTTTTCTaGCAGCAGCACCGAGTAAAG +
Preference number: 4 (lower is better)
Translates to: AGSRAGEVRVFALRGWAVQLRVF*QQHRVK
Trigger: CTTTACTCGGTGCTGCTGGCAGAAAACGCGAAGCTG...GACCGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR GCA 90 bp TCGGGAAGTTGGCAAAGTGGAGCCAGTCCTAAAGCACAGTGTCAGGGCATCCTGGGCAGGGCCTGTTGCTaGAGAATGATGGGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: SGSWQSGASPKAQCQGILGRACC*RMMGAC
Trigger: GCAGGCCCCCATCATTCTGCAGCAACAGGCCCTGCC...CAGGATGCCCTGACACTGTGCTTTAGGACTGGCTCCACTTTGCCAACTTCCCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321374.9
ENST00000673517.1
CDS-3UTR GCA 90 bp CTGCTGAGAGTTAGCGGTCTCCTTCTGGGGGCTCAAGGGCTTGTTGAGCTTAGAGGCAGGGCCTGTTGCTaGAGAATGATGGGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: LLRVSGLLLGAQGLVELRGRACC*RMMGAC
Trigger: GCAGGCCCCCATCATTCTGCAGCAACAGGCCCTGCC...TCTAAGCTCAACAAGCCCTTGAGCCCCCAGAAGGAGACCGCTAACTCTCAGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR GCA 90 bp CTGGCCACGGGCAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGGAGTGGCCTGGGCCATaGGTCTCTTGTAGCCTCTCT +
Preference number: 4 (lower is better)
Translates to: LATGKAQLAQEQEKSGSLEWPGP*VSCSLS
Trigger: AGAGAGGCTACAAGAGACGCATGGCCCAGGCCACTC...CAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTGCCCGTGGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268082.4
ENST00000673214.1
CDS-3UTR GCA 90 bp CTGGCCACGGGCAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGAGAGAGGAGATCCTGTaGGGGCAGGGTCTCTGTGCA +
Preference number: 4 (lower is better)
Translates to: LATGKAQLAQEQEKSGSLREEIL*GQGLCA
Trigger: TGCACAGAGACCCTGCCCGCACAGGATCTCCTCTCT...CAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTGCCCGTGGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268082.4
ENST00000673214.1
CDS-3UTR GCA 90 bp TTCTGGCCACGGGCAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTCGTGTGGCCAGATCCTaGTTCTCTCGTCCCCAGCGT +
Preference number: 4 (lower is better)
Translates to: FWPRAKHSWLKSRRSQGLRVARS*FSRPQR
Trigger: ACGCTGGGGACGAGAGAAGCAGGATCTGGCCACACG...AAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTGCCCGTGGCCAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR GCA 90 bp TCAGGGCATCCTGGAGATGCCTGCATGGACCCCTCATCCACAGTCATCTCCTTGCGTGTGGCCAGATCCTaGTTCTCTCGTCCCCAGCGT +
Preference number: 4 (lower is better)
Translates to: SGHPGDACMDPSSTVISLRVARS*FSRPQR
Trigger: ACGCTGGGGACGAGAGAAGCAGGATCTGGCCACACG...CAAGGAGATGACTGTGGATGAGGGGTCCATGCAGGCATCTCCAGGATGCCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR GCA 90 bp GCTTCTGGCCACGGGCAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCCCTTTTTCTTGCTCCTaGAGCCGTGTGGCCAGATCC +
Preference number: 4 (lower is better)
Translates to: ASGHGQSTAGSRAGEVRVPFSCS*SRVARS
Trigger: GGATCTGGCCACACGGCTGCAGGAGCAAGAAAAAGG...GACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTGCCCGTGGCCAGAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR GCA 90 bp ACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGGCGCCTTTTTCTTGCTCCTaGAGCCGTGTGGCCAGATCC +
Preference number: 4 (lower is better)
Translates to: TAGSRAGEVRVFALRGWAPFSCS*SRVARS
Trigger: GGATCTGGCCACACGGCTGCAGGAGCAAGAAAAAGG...CGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR GCA 90 bp CATCCTGGAGATGCCTGCATGGACCCCTCATCCACAGTCATCTCCTTGAGTTTCTCAGGGTCTTTGCTTTaGGGGGCTGGGCGGTCCCGG +
Preference number: 4 (lower is better)
Translates to: HPGDACMDPSSTVISLSFSGSLL*GAGRSR
Trigger: CCGGGACCGCCCAGCCCCGCAAAGCAAAGACCCTGA...GAAACTCAAGGAGATGACTGTGGATGAGGGGTCCATGCAGGCATCTCCAGGATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR GCA 90 bp GGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGGCGGTCCCGTGCTCAAGGGCATATTaGCTGACAAACCAGGCCTCA +
Preference number: 4 (lower is better)
Translates to: GSRAGEVRVFALRGWAVPCSRAY*LTNQAS
Trigger: TGAGGCCTGGTTTGTCAGGCAATATGCCCTTGAGCA...CGGGACCGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR GCA 90 bp AGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGTCCCAGGGGGTGACCTaGTCAAGGGCATATTGCCTG +
Preference number: 4 (lower is better)
Translates to: STAGSRAGEVRVFALRGWSQGVT*SRAYCL
Trigger: CAGGCAATATGCCCTTGAGCAGGTCACCCCCTGGGA...CCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CCA 90 bp GCTTCTGGCCACGGGCAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCCTGCCATCTTCTGCATaGCCCGCCGGTAGTTGTTCA +
Preference number: 4 (lower is better)
Translates to: ASGHGQSTAGSRAGEVRVLPSSA*PAGSCS
Trigger: TGAACAACTACCGGCGGGCCATGCAGAAGATGGCAG...GACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTGCCCGTGGCCAGAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CCA 90 bp CTGGCCACGGGCAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTCCTTCCAGGATGCTaGCCTGTCTCCGCAGAGACA +
Preference number: 4 (lower is better)
Translates to: LATGKAQLAQEQEKSGSLLLPGC*PVSAET
Trigger: TGTCTCTGCGGAGACAGGCCAGCATCCTGGAAGGAG...CAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTGCCCGTGGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CCA 90 bp GTGTCAGGGCATCCTGGAGATGCCTGCATGGACCCCTCATCCACAGTCATCTCCCTCCTTCCAGGATGCTaGCCTGTCTCCGCAGAGACA +
Preference number: 4 (lower is better)
Translates to: VSGHPGDACMDPSSTVISLLPGC*PVSAET
Trigger: TGTCTCTGCGGAGACAGGCCAGCATCCTGGAAGGAG...GGAGATGACTGTGGATGAGGGGTCCATGCAGGCATCTCCAGGATGCCCTGACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CCA 90 bp GGGAGCCTAGGACTCCTGACCCCCAGCCCTGGAGTTGGCTCCACAATGGCTTTTTCGATCACCTTCTCTTaGTGCCGCACAGTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: GSLGLLTPSPGVGSTMAFSITFS*CRTVSS
Trigger: GGAGGAGACTGTGCGGCACCAAGAGAAGGTGATCGA...AAAAGCCATTGTGGAGCCAACTCCAGGGCTGGGGGTCAGGAGTCCTAGGCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CCA 90 bp CATTCCCAGGGGGTGACCTGCTCAAGGGCATATTGCCTGACAAACCAGGCCTCAATGGGGGCCTGCTGGTaGCGGTTCTTATCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: HSQGVTCSRAYCLTNQASMGACW*RFLSSS
Trigger: GGAGCTGGATAAGAACCGCCACCAGCAGGCCCCCAT...TGAGGCCTGGTTTGTCAGGCAATATGCCCTTGAGCAGGTCACCCCCTGGGAATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CCA 90 bp TTCTGGCCACGGGCAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTATGGGGGCCTGCTGGTaGCGGTTCTTATCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: FWPRAKHSWLKSRRSQGLMGACW*RFLSSS
Trigger: GGAGCTGGATAAGAACCGCCACCAGCAGGCCCCCAT...AAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTGCCCGTGGCCAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CCA 90 bp CAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCATGGGGGCCTGCTGGTaGCGGTTCTTATCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: QSTAGSRAGEVRVFALRGMGACW*RFLSSS
Trigger: GGAGCTGGATAAGAACCGCCACCAGCAGGCCCCCAT...GCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CCA 90 bp TTGGTAATGGAGCAGGAATGGGAGCCTAGGACTCCTGACCCCCAGCCCTGGAGTTCTGTGCACTCTGAGTaGCCTGGGCCATGCGTCTCT +
Preference number: 4 (lower is better)
Translates to: LVMEQEWEPRTPDPQPWSSVHSE*PGPCVS
Trigger: AGAGACGCATGGCCCAGGCCACTCAGAGTGCACAGA...ACTCCAGGGCTGGGGGTCAGGAGTCCTAGGCTCCCATTCCTGCTCCATTACCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268082.4
ENST00000673214.1
CDS-3UTR CCA 90 bp AAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGCTCCTGCAGCCGTGTaGCCAGATCCTGCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: KHSWLKSRRSQGLCFAGLAPAAV*PDPASL
Trigger: GAGAGAAGCAGGATCTGGCCACACGGCTGCAGGAGC...CAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CCA 90 bp TTCTGGCCACGGGCAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTGCTCCTGCAGCCGTGTaGCCAGATCCTGCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: FWPRAKHSWLKSRRSQGLAPAAV*PDPASL
Trigger: GAGAGAAGCAGGATCTGGCCACACGGCTGCAGGAGC...AAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTGCCCGTGGCCAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CCA 90 bp CAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCACTTTGGGGGTGCGGTaGCTTCCTGCTCCACCACCT +
Preference number: 4 (lower is better)
Translates to: QSTAGSRAGEVRVFALRGTLGVR*LPAPPP
Trigger: AGGTGGTGGAGCAGGAAGCCACCGCACCCCCAAAGT...GCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CCA 90 bp CATTCCCAGGGGGTGACCTGCTCAAGGGCATATTGCCTGACAAACCAGGCCTCAACTTTGGGGGTGCGGTaGCTTCCTGCTCCACCACCT +
Preference number: 4 (lower is better)
Translates to: HSQGVTCSRAYCLTNQASTLGVR*LPAPPP
Trigger: AGGTGGTGGAGCAGGAAGCCACCGCACCCCCAAAGT...TGAGGCCTGGTTTGTCAGGCAATATGCCCTTGAGCAGGTCACCCCCTGGGAATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CCA 90 bp TCAGGGCATCCTGGAGATGCCTGCATGGACCCCTCATCCACAGTCATCTCCTTGACTTTGGGGGTGCGGTaGCTTCCTGCTCCACCACCT +
Preference number: 4 (lower is better)
Translates to: SGHPGDACMDPSSTVISLTLGVR*LPAPPP
Trigger: AGGTGGTGGAGCAGGAAGCCACCGCACCCCCAAAGT...CAAGGAGATGACTGTGGATGAGGGGTCCATGCAGGCATCTCCAGGATGCCCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CCA 90 bp CAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGGCGGGTAATGGAGCAGGAATaGGAGCCTAGGACTCCTGAC +
Preference number: 4 (lower is better)
Translates to: QLAQEQEKSGSLLCGAGRVMEQE*EPRTPD
Trigger: GTCAGGAGTCCTAGGCTCCCATTCCTGCTCCATTAC...CCGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CCA 90 bp ACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGGCGCTGGAGATGCCTGCATaGACCCCTCATCCACAGTCA +
Preference number: 4 (lower is better)
Translates to: TAGSRAGEVRVFALRGWALEMPA*TPHPQS
Trigger: TGACTGTGGATGAGGGGTCCATGCAGGCATCTCCAG...CGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CCA 90 bp CTGGCCACGGGCAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGAGTGTCAGGGCATCCTaGAGATGCCTGCATGGACCC +
Preference number: 4 (lower is better)
Translates to: LATGKAQLAQEQEKSGSLSVRAS*RCLHGP
Trigger: GGGTCCATGCAGGCATCTCCAGGATGCCCTGACACT...CAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTGCCCGTGGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CCA 90 bp AGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGAGTGTCAGGGCATCCTaGAGATGCCTGCATGGACCC +
Preference number: 4 (lower is better)
Translates to: STAGSRAGEVRVFALRGWSVRAS*RCLHGP
Trigger: GGGTCCATGCAGGCATCTCCAGGATGCCCTGACACT...CCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CCA 90 bp TCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGGCGGTCCCGGGGGTATCCAGAATCCAGTaGGCCATGACCTGGCAAAGA +
Preference number: 4 (lower is better)
Translates to: SRAGEVRVFALRGWAVPGVSRIQ*AMTWQR
Trigger: TCTTTGCCAGGTCATGGCCCACTGGATTCTGGATAC...CCCCGGGACCGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CCA 90 bp CATTCCCAGGGGGTGACCTGCTCAAGGGCATATTGCCTGACAAACCAGGCCTCAGAAGGAGGCCTGCTCTaGGGCTCAGGTCTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: HSQGVTCSRAYCLTNQASEGGLL*GSGLLR
Trigger: TCTCAGCAGACCTGAGCCCCAGAGCAGGCCTCCTTC...TGAGGCCTGGTTTGTCAGGCAATATGCCCTTGAGCAGGTCACCCCCTGGGAATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CCA 90 bp GGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGGCGGTCCCGTTGTTCTCGGGAAGTTaGCAAAGTGGAGCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: GSRAGEVRVFALRGWAVPLFSGS*QSGASP
Trigger: AGGACTGGCTCCACTTTGCCAACTTCCCGAGAACAA...CGGGACCGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321374.9
ENST00000673517.1
CDS-3UTR TCA 90 bp GCATCCTGGAGATGCCTGCATGGACCCCTCATCCACAGTCATCTCCTTGAGTTTCCTGTTGCTGCAGAATaGTGGGGGCCTGCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: ASWRCLHGPLIHSHLLEFPVAAE*WGPAGG
Trigger: GCCACCAGCAGGCCCCCATCATTCTGCAGCAACAGG...AAACTCAAGGAGATGACTGTGGATGAGGGGTCCATGCAGGCATCTCCAGGATGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR TCA 90 bp CATCCTGGAGATGCCTGCATGGACCCCTCATCCACAGTCATCTCCTTGAGTTTCGACAGGATCCGGCTCTaGGCGTGTTCCAGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: HPGDACMDPSSTVISLSFDRIRL*ACSSLA
Trigger: GGCCAAGCTGGAACACGCTCAGAGCCGGATCCTGTC...GAAACTCAAGGAGATGACTGTGGATGAGGGGTCCATGCAGGCATCTCCAGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR TCA 90 bp GCATCCTGGAGATGCCTGCATGGACCCCTCATCCACAGTCATCTCCTTGAGTTTGACAGGATCCGGCTCTaGGCGTGTTCCAGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: ASWRCLHGPLIHSHLLEFDRIRL*ACSSLA
Trigger: GGCCAAGCTGGAACACGCTCAGAGCCGGATCCTGTC...AAACTCAAGGAGATGACTGTGGATGAGGGGTCCATGCAGGCATCTCCAGGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR TCA 90 bp GCTTCTGGCCACGGGCAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCCCACAGTCATCTCCTTaGGTTTCACAGCACCCCATG +
Preference number: 4 (lower is better)
Translates to: ASGHGQSTAGSRAGEVRVPQSSP*VSQHPM
Trigger: CATGGGGTGCTGTGAAACTCAAGGAGATGACTGTGG...GACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTGCCCGTGGCCAGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR TCA 90 bp AGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGCTTGAGGGGCAGTTGTaGGCAGGCCTGTTTGTTCTC +
Preference number: 4 (lower is better)
Translates to: STAGSRAGEVRVFALRGWLEGQL*AGLFVL
Trigger: GAGAACAAACAGGCCTGCTCACAACTGCCCCTCAAG...CCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR GCA 90 bp CAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTCTCTCCTTCCAGGATaGTGGCCTGTCTCCGCAGAG +
Preference number: 4 (lower is better)
Translates to: QSTAGSRAGEVRVFALRGSLLPG*WPVSAE
Trigger: CTCTGCGGAGACAGGCCAGCATCCTGGAAGGAGAGA...GCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR GCA 90 bp TCAGGGCATCCTGGAGATGCCTGCATGGACCCCTCATCCACAGTCATCTCCTTGGGCGGCTCCTCAGTATaGGGTTCTCTCCTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: SGHPGDACMDPSSTVISLGGSSV*GSLLPG
Trigger: TCCTGGAAGGAGAGAACCGCATACTGAGGAGCCGCC...CAAGGAGATGACTGTGGATGAGGGGTCCATGCAGGCATCTCCAGGATGCCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR GCA 90 bp TGGAGCAGGAATGGGAGCCTAGGACTCCTGACCCCCAGCCCTGGAGTTGGCTCCTCATTCTGCAAATGCTaGACCCTGTCCCTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: WSRNGSLGLLTPSPGVGSSFCKC*TLSLSF
Trigger: GAAACTGAGGGACAGGGTGCAGCATTTGCAGAATGA...GGAGCCAACTCCAGGGCTGGGGGTCAGGAGTCCTAGGCTCCCATTCCTGCTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR GCA 90 bp CAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGGCGGAGCTCATTCTGCAAATaGTGCACCCTGTCCCTCAGT +
Preference number: 4 (lower is better)
Translates to: QLAQEQEKSGSLLCGAGRSSFCK*CTLSLS
Trigger: ACTGAGGGACAGGGTGCAGCATTTGCAGAATGAGCT...CCGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR GCA 90 bp CAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGGCGGCGAATCAGCTCATTCTaGAAATGCTGCACCCTGTCC +
Preference number: 4 (lower is better)
Translates to: QLAQEQEKSGSLLCGAGRRISSF*KCCTLS
Trigger: GGACAGGGTGCAGCATTTGCAGAATGAGCTGATTCG...CCGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR GCA 90 bp TCAGGGCATCCTGGAGATGCCTGCATGGACCCCTCATCCACAGTCATCTCCTTGAGCTTGCCCTGGTACTaGTTCAGCAGAGCGGCCTGT +
Preference number: 4 (lower is better)
Translates to: SGHPGDACMDPSSTVISLSLPWY*FSRAAC
Trigger: ACAGGCCGCTCTGCTGAAGCAGTACCAGGGCAAGCT...CAAGGAGATGACTGTGGATGAGGGGTCCATGCAGGCATCTCCAGGATGCCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR GCA 90 bp GTGTCAGGGCATCCTGGAGATGCCTGCATGGACCCCTCATCCACAGTCATCTCCAGCGCCTTCATCTTCTaGAGCTTGCCCTGGTACTGC +
Preference number: 4 (lower is better)
Translates to: VSGHPGDACMDPSSTVISSAFIF*SLPWYC
Trigger: GCAGTACCAGGGCAAGCTGCAGAAGATGAAGGCGCT...GGAGATGACTGTGGATGAGGGGTCCATGCAGGCATCTCCAGGATGCCCTGACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR GCA 90 bp AGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGAGAATGATGGGGGCCTaGTGGTGGCGGTTCTTATCC +
Preference number: 4 (lower is better)
Translates to: STAGSRAGEVRVFALRGWRMMGA*WWRFLS
Trigger: GGATAAGAACCGCCACCAGCAGGCCCCCATCATTCT...CCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR GCA 90 bp CTGGCCACGGGCAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGAGAATGATGGGGGCCTaGTGGTGGCGGTTCTTATCC +
Preference number: 4 (lower is better)
Translates to: LATGKAQLAQEQEKSGSLRMMGA*WWRFLS
Trigger: GGATAAGAACCGCCACCAGCAGGCCCCCATCATTCT...CAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTGCCCGTGGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR GCA 90 bp TGTTCTCGGGAAGTTGGCAAAGTGGAGCCTACATCGTGGCCATCTGAGAAGGGTGGCAGGGCCTGTTGCTaGAGAATGATGGGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: CSREVGKVEPTSWPSEKGGRACC*RMMGAC
Trigger: GCAGGCCCCCATCATTCTGCAGCAACAGGCCCTGCC...ACCCTTCTCAGATGGCCACGATGTAGGCTCCACTTTGCCAACTTCCCGAGAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR GCA 90 bp CGGGCAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGAGTGGCCTGGGCCATaGGTCTCTTGTAGCCTCTCT +
Preference number: 4 (lower is better)
Translates to: RAKHSWLKSRRSQGLCFAEWPGP*VSCSLS
Trigger: AGAGAGGCTACAAGAGACGCATGGCCCAGGCCACTC...CGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTGCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268082.4
ENST00000673214.1
CDS-3UTR GCA 90 bp GTGTCAGGGCATCCTGGAGATGCCTGCATGGACCCCTCATCCACAGTCATCTCCCCTTTTTCTTGCTCCTaGAGCCGTGTGGCCAGATCC +
Preference number: 4 (lower is better)
Translates to: VSGHPGDACMDPSSTVISPFSCS*SRVARS
Trigger: GGATCTGGCCACACGGCTGCAGGAGCAAGAAAAAGG...GGAGATGACTGTGGATGAGGGGTCCATGCAGGCATCTCCAGGATGCCCTGACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR GCA 90 bp CGGGCAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGAGAAGTCAGGGTCTTTaGTTTGCGGGGCTGGGCGGT +
Preference number: 4 (lower is better)
Translates to: RAKHSWLKSRRSQGLCFARSQGL*FAGLGG
Trigger: ACCGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCT...CGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTGCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR GCA 90 bp CCGGGGTTGAACTTGAGGGGCAGTTGTGAGCAGGCCTGTTTGTTCTCGGGAAGTAGAAGTCAGGGTCTTTaGTTTGCGGGGCTGGGCGGT +
Preference number: 4 (lower is better)
Translates to: PGLNLRGSCEQACLFSGSRSQGL*FAGLGG
Trigger: ACCGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCT...ACTTCCCGAGAACAAACAGGCCTGCTCACAACTGCCCCTCAAGTTCAACCCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR GCA 90 bp CCGGGGTTGAACTTGAGGGGCAGTTGTGAGCAGGCCTGTTTGTTCTCGGGAAGTTCCCAGGGGGTGACCTaGTCAAGGGCATATTGCCTG +
Preference number: 4 (lower is better)
Translates to: PGLNLRGSCEQACLFSGSSQGVT*SRAYCL
Trigger: CAGGCAATATGCCCTTGAGCAGGTCACCCCCTGGGA...ACTTCCCGAGAACAAACAGGCCTGCTCACAACTGCCCCTCAAGTTCAACCCCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR GCA 90 bp CGGGCAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGTCCAGCTCTGAGGGCTaGTTGAGGTCCATGGAGTGG +
Preference number: 4 (lower is better)
Translates to: RAKHSWLKSRRSQGLCFASSSEG*LRSMEW
Trigger: CCACTCCATGGACCTCAAGCAGCCCTCAGAGCTGGA...CGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTGCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR GCA 90 bp TTCTGGCCACGGGCAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTCCAGCTCTGAGGGCTaGTTGAGGTCCATGGAGTGG +
Preference number: 4 (lower is better)
Translates to: FWPRAKHSWLKSRRSQGLSSSEG*LRSMEW
Trigger: CCACTCCATGGACCTCAAGCAGCCCTCAGAGCTGGA...AAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTGCCCGTGGCCAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR GCA 90 bp GCATCCTGGAGATGCCTGCATGGACCCCTCATCCACAGTCATCTCCTTGAGTTTTCCGGCAGGGCCTGTTaGTGCAGAATGATGGGGGCC +
Preference number: 4 (lower is better)
Translates to: ASWRCLHGPLIHSHLLEFSGRAC*CRMMGA
Trigger: GGCCCCCATCATTCTGCAGCAACAGGCCCTGCCGGA...AAACTCAAGGAGATGACTGTGGATGAGGGGTCCATGCAGGCATCTCCAGGATGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673517.1
CDS-3UTR GCA 90 bp AGTTGGCAAAGTGGAGCCAGTCCTAAAGCACAGTGTCAGGGCATCCTGGAGATGTCCGGCAGGGCCTGTTaGTGCAGAATGATGGGGGCC +
Preference number: 4 (lower is better)
Translates to: SWQSGASPKAQCQGILEMSGRAC*CRMMGA
Trigger: GGCCCCCATCATTCTGCAGCAACAGGCCCTGCCGGA...CATCTCCAGGATGCCCTGACACTGTGCTTTAGGACTGGCTCCACTTTGCCAACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321374.9
ENST00000673517.1
CDS-3UTR CCA 90 bp CAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCCTCCTTCCAGGATGCTaGCCTGTCTCCGCAGAGACA +
Preference number: 4 (lower is better)
Translates to: QSTAGSRAGEVRVFALRGLLPGC*PVSAET
Trigger: TGTCTCTGCGGAGACAGGCCAGCATCCTGGAAGGAG...GCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CCA 90 bp CGGGCAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGCTCCTTCCAGGATGCTaGCCTGTCTCCGCAGAGACA +
Preference number: 4 (lower is better)
Translates to: RAKHSWLKSRRSQGLCFALLPGC*PVSAET
Trigger: TGTCTCTGCGGAGACAGGCCAGCATCCTGGAAGGAG...CGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTGCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CCA 90 bp CCGGGGTTGAACTTGAGGGGCAGTTGTGAGCAGGCCTGTTTGTTCTCGGGAAGTCTCCTTCCAGGATGCTaGCCTGTCTCCGCAGAGACA +
Preference number: 4 (lower is better)
Translates to: PGLNLRGSCEQACLFSGSLLPGC*PVSAET
Trigger: TGTCTCTGCGGAGACAGGCCAGCATCCTGGAAGGAG...ACTTCCCGAGAACAAACAGGCCTGCTCACAACTGCCCCTCAAGTTCAACCCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CCA 90 bp AAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGATGGACACCGTGTTCTaGGCCTCACTGGCTTTGCCC +
Preference number: 4 (lower is better)
Translates to: KHSWLKSRRSQGLCFAGLMDTVF*ASLALP
Trigger: GGGCAAAGCCAGTGAGGCCCAGAACACGGTGTCCAT...CAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CCA 90 bp CCGGGGTTGAACTTGAGGGGCAGTTGTGAGCAGGCCTGTTTGTTCTCGGGAAGTATGGACACCGTGTTCTaGGCCTCACTGGCTTTGCCC +
Preference number: 4 (lower is better)
Translates to: PGLNLRGSCEQACLFSGSMDTVF*ASLALP
Trigger: GGGCAAAGCCAGTGAGGCCCAGAACACGGTGTCCAT...ACTTCCCGAGAACAAACAGGCCTGCTCACAACTGCCCCTCAAGTTCAACCCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CCA 90 bp CATCCTGGAGATGCCTGCATGGACCCCTCATCCACAGTCATCTCCTTGAGTTTCCAGCAGAGCGGCCTGTaGCTGCTGGGCCTGATACAG +
Preference number: 4 (lower is better)
Translates to: HPGDACMDPSSTVISLSFQQSGL*LLGLIQ
Trigger: CTGTATCAGGCCCAGCAGCCACAGGCCGCTCTGCTG...GAAACTCAAGGAGATGACTGTGGATGAGGGGTCCATGCAGGCATCTCCAGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CCA 90 bp AGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGTCGATCACCTTCTCTTaGTGCCGCACAGTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: STAGSRAGEVRVFALRGWSITFS*CRTVSS
Trigger: GGAGGAGACTGTGCGGCACCAAGAGAAGGTGATCGA...CCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CCA 90 bp GTGTCAGGGCATCCTGGAGATGCCTGCATGGACCCCTCATCCACAGTCATCTCCTCGATCACCTTCTCTTaGTGCCGCACAGTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: VSGHPGDACMDPSSTVISSITFS*CRTVSS
Trigger: GGAGGAGACTGTGCGGCACCAAGAGAAGGTGATCGA...GGAGATGACTGTGGATGAGGGGTCCATGCAGGCATCTCCAGGATGCCCTGACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CCA 90 bp TCGGGAAGTTGGCAAAGTGGAGCCAGTCCTAAAGCACAGTGTCAGGGCATCCTGATGGGGGCCTGCTGGTaGCGGTTCTTATCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: SGSWQSGASPKAQCQGILMGACW*RFLSSS
Trigger: GGAGCTGGATAAGAACCGCCACCAGCAGGCCCCCAT...CAGGATGCCCTGACACTGTGCTTTAGGACTGGCTCCACTTTGCCAACTTCCCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321374.9
ENST00000673517.1
CDS-3UTR CCA 90 bp CTGCTGAGAGTTAGCGGTCTCCTTCTGGGGGCTCAAGGGCTTGTTGAGCTTAGAATGGGGGCCTGCTGGTaGCGGTTCTTATCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LLRVSGLLLGAQGLVELRMGACW*RFLSSS
Trigger: GGAGCTGGATAAGAACCGCCACCAGCAGGCCCCCAT...TCTAAGCTCAACAAGCCCTTGAGCCCCCAGAAGGAGACCGCTAACTCTCAGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CCA 90 bp CCGGGGTTGAACTTGAGGGGCAGTTGTGAGCAGGCCTGTTTGTTCTCGGGAAGTATGATGGGGGCCTGCTaGTGGCGGTTCTTATCCAGC +
Preference number: 4 (lower is better)
Translates to: PGLNLRGSCEQACLFSGSMMGAC*WRFLSS
Trigger: GCTGGATAAGAACCGCCACCAGCAGGCCCCCATCAT...ACTTCCCGAGAACAAACAGGCCTGCTCACAACTGCCCCTCAAGTTCAACCCCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CCA 90 bp CAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCATGATGGGGGCCTGCTaGTGGCGGTTCTTATCCAGC +
Preference number: 4 (lower is better)
Translates to: QSTAGSRAGEVRVFALRGMMGAC*WRFLSS
Trigger: GCTGGATAAGAACCGCCACCAGCAGGCCCCCATCAT...GCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CCA 90 bp TTCCCAGGGGGTGACCTGCTCAAGGGCATATTGCCTGACAAACCAGGCCTCAGATCTGTGCACTCTGAGTaGCCTGGGCCATGCGTCTCT +
Preference number: 4 (lower is better)
Translates to: FPGGDLLKGILPDKPGLRSVHSE*PGPCVS
Trigger: AGAGACGCATGGCCCAGGCCACTCAGAGTGCACAGA...TCTGAGGCCTGGTTTGTCAGGCAATATGCCCTTGAGCAGGTCACCCCCTGGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268082.4
ENST00000673214.1
CDS-3UTR CCA 90 bp GCTTCTGGCCACGGGCAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCGAGTTGGCTCCACAATaGCTTTTCTCAGGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: ASGHGQSTAGSRAGEVRVELAPQ*LFSGPS
Trigger: ACTGGGCCCTGAGAAAAGCCATTGTGGAGCCAACTC...GACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTGCCCGTGGCCAGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CCA 90 bp GTGTCAGGGCATCCTGGAGATGCCTGCATGGACCCCTCATCCACAGTCATCTCCCCCCAGCCCTGGAGTTaGCTCCACAATGGCTTTTCT +
Preference number: 4 (lower is better)
Translates to: VSGHPGDACMDPSSTVISPQPWS*LHNGFS
Trigger: AGAAAAGCCATTGTGGAGCCAACTCCAGGGCTGGGG...GGAGATGACTGTGGATGAGGGGTCCATGCAGGCATCTCCAGGATGCCCTGACAC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CCA 90 bp TGTTCTCGGGAAGTTGGCAAAGTGGAGCCTACATCGTGGCCATCTGAGAAGGGTCCTGACCCCCAGCCCTaGAGTTGGCTCCACAATGGC +
Preference number: 4 (lower is better)
Translates to: CSREVGKVEPTSWPSEKGPDPQP*SWLHNG
Trigger: GCCATTGTGGAGCCAACTCCAGGGCTGGGGGTCAGG...ACCCTTCTCAGATGGCCACGATGTAGGCTCCACTTTGCCAACTTCCCGAGAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CCA 90 bp GCTTCTGGCCACGGGCAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCGTAATGGAGCAGGAATaGGAGCCTAGGACTCCTGAC +
Preference number: 4 (lower is better)
Translates to: ASGHGQSTAGSRAGEVRVVMEQE*EPRTPD
Trigger: GTCAGGAGTCCTAGGCTCCCATTCCTGCTCCATTAC...GACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTGCCCGTGGCCAGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CCA 90 bp GGGAGCCTAGGACTCCTGACCCCCAGCCCTGGAGTTGGCTCCACAATGGCTTTTGTAATGGAGCAGGAATaGGAGCCTAGGACTCCTGAC +
Preference number: 4 (lower is better)
Translates to: GSLGLLTPSPGVGSTMAFVMEQE*EPRTPD
Trigger: GTCAGGAGTCCTAGGCTCCCATTCCTGCTCCATTAC...AAAAGCCATTGTGGAGCCAACTCCAGGGCTGGGGGTCAGGAGTCCTAGGCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CCA 90 bp TTGGTAATGGAGCAGGAATGGGAGCCTAGGACTCCTGACCCCCAGCCCTGGAGTCTGGAGATGCCTGCATaGACCCCTCATCCACAGTCA +
Preference number: 4 (lower is better)
Translates to: LVMEQEWEPRTPDPQPWSLEMPA*TPHPQS
Trigger: TGACTGTGGATGAGGGGTCCATGCAGGCATCTCCAG...ACTCCAGGGCTGGGGGTCAGGAGTCCTAGGCTCCCATTCCTGCTCCATTACCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CCA 90 bp TTCTGGCCACGGGCAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTAGTGTCAGGGCATCCTaGAGATGCCTGCATGGACCC +
Preference number: 4 (lower is better)
Translates to: FWPRAKHSWLKSRRSQGLSVRAS*RCLHGP
Trigger: GGGTCCATGCAGGCATCTCCAGGATGCCCTGACACT...AAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTGCCCGTGGCCAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CCA 90 bp TTGGTAATGGAGCAGGAATGGGAGCCTAGGACTCCTGACCCCCAGCCCTGGAGTCGGGCAAAGCACAGCTaGCTCAAGAGCAGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: LVMEQEWEPRTPDPQPWSRAKHS*LKSRRS
Trigger: ACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTGCCCG...ACTCCAGGGCTGGGGGTCAGGAGTCCTAGGCTCCCATTCCTGCTCCATTACCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CCA 90 bp CTGGCCACGGGCAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCGGGCAAAGCACAGCTaGCTCAAGAGCAGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: LATGKAQLAQEQEKSGSLRAKHS*LKSRRS
Trigger: ACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTGCCCG...CAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTGCCCGTGGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CCA 90 bp CAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGGCGGGTATCCAGAATCCAGTaGGCCATGACCTGGCAAAGA +
Preference number: 4 (lower is better)
Translates to: QLAQEQEKSGSLLCGAGRVSRIQ*AMTWQR
Trigger: TCTTTGCCAGGTCATGGCCCACTGGATTCTGGATAC...CCGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CCA 90 bp GCATCCTGGAGATGCCTGCATGGACCCCTCATCCACAGTCATCTCCTTGAGTTTGGTGAGGGCACTCTGTaGTGTGCAAAGCGGGGTGCG +
Preference number: 4 (lower is better)
Translates to: ASWRCLHGPLIHSHLLEFGEGTL*CAKRGA
Trigger: CGCACCCCGCTTTGCACACCACAGAGTGCCCTCACC...AAACTCAAGGAGATGACTGTGGATGAGGGGTCCATGCAGGCATCTCCAGGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR TCA 90 bp AGTTGGCAAAGTGGAGCCAGTCCTAAAGCACAGTGTCAGGGCATCCTGGAGATGCAGAGAAGCTGTCAATaGGGCCTGGGGCAGCCTTGG +
Preference number: 4 (lower is better)
Translates to: SWQSGASPKAQCQGILEMQRSCQ*GLGQPW
Trigger: CCAAGGCTGCCCCAGGCCTCATTGACAGCTTCTCTG...CATCTCCAGGATGCCCTGACACTGTGCTTTAGGACTGGCTCCACTTTGCCAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321374.9
ENST00000673517.1
CDS-3UTR TCA 90 bp AACTTGAGGGGCAGTTGTGAGCAGGCCTGTTTGTTCTCGGGAAGTTGGCAAAGTCCTGTTGCTGCAGAATaGTGGGGGCCTGCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: NLRGSCEQACLFSGSWQSPVAAE*WGPAGG
Trigger: GCCACCAGCAGGCCCCCATCATTCTGCAGCAACAGG...ACTTTGCCAACTTCCCGAGAACAAACAGGCCTGCTCACAACTGCCCCTCAAGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR TCA 90 bp TTTGTTCTCGGGAAGTTGGCAAAGTGGAGCCTACATCGTGGCCATCTGAGAAGGCCTGTTGCTGCAGAATaGTGGGGGCCTGCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: FVLGKLAKWSLHRGHLRRPVAAE*WGPAGG
Trigger: GCCACCAGCAGGCCCCCATCATTCTGCAGCAACAGG...CCTTCTCAGATGGCCACGATGTAGGCTCCACTTTGCCAACTTCCCGAGAACAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR TCA 90 bp GTGTCAGGGCATCCTGGAGATGCCTGCATGGACCCCTCATCCACAGTCATCTCCGCTTGGCCAGGAGGTTaGACTTGTCTGAAGTACCAG +
Preference number: 4 (lower is better)
Translates to: VSGHPGDACMDPSSTVISAWPGG*TCLKYQ
Trigger: CTGGTACTTCAGACAAGTTCAACCTCCTGGCCAAGC...GGAGATGACTGTGGATGAGGGGTCCATGCAGGCATCTCCAGGATGCCCTGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR TCA 90 bp TTTGTTCTCGGGAAGTTGGCAAAGTGGAGCCTACATCGTGGCCATCTGAGAAGGGACAGGATCCGGCTCTaGGCGTGTTCCAGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: FVLGKLAKWSLHRGHLRRDRIRL*ACSSLA
Trigger: GGCCAAGCTGGAACACGCTCAGAGCCGGATCCTGTC...CCTTCTCAGATGGCCACGATGTAGGCTCCACTTTGCCAACTTCCCGAGAACAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR TCA 90 bp TCAGGGCATCCTGGAGATGCCTGCATGGACCCCTCATCCACAGTCATCTCCTTGAAGCTACTCTGCCCATaGGCGCAGCCAGTCCTAAAG +
Preference number: 4 (lower is better)
Translates to: SGHPGDACMDPSSTVISLKLLCP*AQPVLK
Trigger: CTTTAGGACTGGCTGCGCTCATGGGCAGAGTAGCTT...CAAGGAGATGACTGTGGATGAGGGGTCCATGCAGGCATCTCCAGGATGCCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR TCA 90 bp AAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGAAGCTACTCTGCCCATaGGCGCAGCCAGTCCTAAAG +
Preference number: 4 (lower is better)
Translates to: KHSWLKSRRSQGLCFAGLKLLCP*AQPVLK
Trigger: CTTTAGGACTGGCTGCGCTCATGGGCAGAGTAGCTT...CAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR TCA 90 bp GTGTCAGGGCATCCTGGAGATGCCTGCATGGACCCCTCATCCACAGTCATCTCCCAAGGGCATATTGCCTaGCAAACCAGGCCTCAGAGT +
Preference number: 4 (lower is better)
Translates to: VSGHPGDACMDPSSTVISQGHIA*QTRPQS
Trigger: ACTCTGAGGCCTGGTTTGTCAGGCAATATGCCCTTG...GGAGATGACTGTGGATGAGGGGTCCATGCAGGCATCTCCAGGATGCCCTGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR GCA 90 bp ACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGGCGAGCTCATTCTGCAAATaGTGCACCCTGTCCCTCAGT +
Preference number: 4 (lower is better)
Translates to: TAGSRAGEVRVFALRGWASSFCK*CTLSLS
Trigger: ACTGAGGGACAGGGTGCAGCATTTGCAGAATGAGCT...CGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR GCA 90 bp AAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGAGCGCCTTCATCTTCTaGAGCTTGCCCTGGTACTGC +
Preference number: 4 (lower is better)
Translates to: KHSWLKSRRSQGLCFAGLSAFIF*SLPWYC
Trigger: GCAGTACCAGGGCAAGCTGCAGAAGATGAAGGCGCT...CAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR GCA 90 bp CAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCAGAATGATGGGGGCCTaGTGGTGGCGGTTCTTATCC +
Preference number: 4 (lower is better)
Translates to: QSTAGSRAGEVRVFALRGRMMGA*WWRFLS
Trigger: GGATAAGAACCGCCACCAGCAGGCCCCCATCATTCT...GCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR GCA 90 bp TTCCCAGGGGGTGACCTGCTCAAGGGCATATTGCCTGACAAACCAGGCCTCAGAAGAATGATGGGGGCCTaGTGGTGGCGGTTCTTATCC +
Preference number: 4 (lower is better)
Translates to: FPGGDLLKGILPDKPGLRRMMGA*WWRFLS
Trigger: GGATAAGAACCGCCACCAGCAGGCCCCCATCATTCT...TCTGAGGCCTGGTTTGTCAGGCAATATGCCCTTGAGCAGGTCACCCCCTGGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR GCA 90 bp TTTGTTCTCGGGAAGTTGGCAAAGTGGAGCCTACATCGTGGCCATCTGAGAAGGGGCAGGGCCTGTTGCTaGAGAATGATGGGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: FVLGKLAKWSLHRGHLRRGRACC*RMMGAC
Trigger: GCAGGCCCCCATCATTCTGCAGCAACAGGCCCTGCC...CCTTCTCAGATGGCCACGATGTAGGCTCCACTTTGCCAACTTCCCGAGAACAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR GCA 90 bp CAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCCCTTTTTCTTGCTCCTaGAGCCGTGTGGCCAGATCC +
Preference number: 4 (lower is better)
Translates to: QSTAGSRAGEVRVFALRGPFSCS*SRVARS
Trigger: GGATCTGGCCACACGGCTGCAGGAGCAAGAAAAAGG...GCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR GCA 90 bp TCAGGGCATCCTGGAGATGCCTGCATGGACCCCTCATCCACAGTCATCTCCTTGCCTTTTTCTTGCTCCTaGAGCCGTGTGGCCAGATCC +
Preference number: 4 (lower is better)
Translates to: SGHPGDACMDPSSTVISLPFSCS*SRVARS
Trigger: GGATCTGGCCACACGGCTGCAGGAGCAAGAAAAAGG...CAAGGAGATGACTGTGGATGAGGGGTCCATGCAGGCATCTCCAGGATGCCCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR GCA 90 bp GTCTCCTTCTGGGGGCTCAAGGGCTTGTTGAGCTTAGAGTCTGAGCTGGGCAGCCTGAAACCTTTTTCTTaGTCCTGCAGCCGTGTGGCC +
Preference number: 4 (lower is better)
Translates to: VSFWGLKGLLSLESELGSLKPFS*SCSRVA
Trigger: GGCCACACGGCTGCAGGAGCAAGAAAAAGGTTTCAG...GCTGCCCAGCTCAGACTCTAAGCTCAACAAGCCCTTGAGCCCCCAGAAGGAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR GCA 90 bp CAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGGCGGATGGAGTTCGAGGGGTaGCTGAAACCTTTTTCTTGC +
Preference number: 4 (lower is better)
Translates to: QLAQEQEKSGSLLCGAGRMEFEG*LKPFSC
Trigger: GCAAGAAAAAGGTTTCAGGCACCCCTCGAACTCCAT...CCGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR GCA 90 bp TTCTGGCCACGGGCAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTCATCCTGGAGATGCCTaGATGGACCCCTCATCCACA +
Preference number: 4 (lower is better)
Translates to: FWPRAKHSWLKSRRSQGLHPGDA*MDPSST
Trigger: TGTGGATGAGGGGTCCATGCAGGCATCTCCAGGATG...AAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTGCCCGTGGCCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR GCA 90 bp GCATCCTGGAGATGCCTGCATGGACCCCTCATCCACAGTCATCTCCTTGAGTTTGGGCACTCTGTGGTGTaGAAAGCGGGGTGCGTGAGT +
Preference number: 4 (lower is better)
Translates to: ASWRCLHGPLIHSHLLEFGHSVV*KAGCVS
Trigger: ACTCACGCACCCCGCTTTGCACACCACAGAGTGCCC...AAACTCAAGGAGATGACTGTGGATGAGGGGTCCATGCAGGCATCTCCAGGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CCA 90 bp CGGGCAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGCTGCCATCTTCTGCATaGCCCGCCGGTAGTTGTTCA +
Preference number: 4 (lower is better)
Translates to: RAKHSWLKSRRSQGLCFALPSSA*PAGSCS
Trigger: TGAACAACTACCGGCGGGCCATGCAGAAGATGGCAG...CGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTGCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CCA 90 bp CTGAGAGTTAGCGGTCTCCTTCTGGGGGCTCAAGGGCTTGTTGAGCTTAGAGTCATGGACACCGTGTTCTaGGCCTCACTGGCTTTGCCC +
Preference number: 4 (lower is better)
Translates to: LRVSGLLLGAQGLVELRVMDTVF*ASLALP
Trigger: GGGCAAAGCCAGTGAGGCCCAGAACACGGTGTCCAT...GACTCTAAGCTCAACAAGCCCTTGAGCCCCCAGAAGGAGACCGCTAACTCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CCA 90 bp GTCTCCTTCTGGGGGCTCAAGGGCTTGTTGAGCTTAGAGTCTGAGCTGGGCAGCGCAGTTTCTGCTTCATaGACACCGTGTTCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: VSFWGLKGLLSLESELGSAVSAS*TPCSGP
Trigger: AGGCCCAGAACACGGTGTCCATGAAGCAGAAACTGC...GCTGCCCAGCTCAGACTCTAAGCTCAACAAGCCCTTGAGCCCCCAGAAGGAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CCA 90 bp AACTTGAGGGGCAGTTGTGAGCAGGCCTGTTTGTTCTCGGGAAGTTGGCAAAGTCAGCAGAGCGGCCTGTaGCTGCTGGGCCTGATACAG +
Preference number: 4 (lower is better)
Translates to: NLRGSCEQACLFSGSWQSQQSGL*LLGLIQ
Trigger: CTGTATCAGGCCCAGCAGCCACAGGCCGCTCTGCTG...ACTTTGCCAACTTCCCGAGAACAAACAGGCCTGCTCACAACTGCCCCTCAAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CCA 90 bp TTTGTTCTCGGGAAGTTGGCAAAGTGGAGCCTACATCGTGGCCATCTGAGAAGGCAGCAGAGCGGCCTGTaGCTGCTGGGCCTGATACAG +
Preference number: 4 (lower is better)
Translates to: FVLGKLAKWSLHRGHLRRQQSGL*LLGLIQ
Trigger: CTGTATCAGGCCCAGCAGCCACAGGCCGCTCTGCTG...CCTTCTCAGATGGCCACGATGTAGGCTCCACTTTGCCAACTTCCCGAGAACAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CCA 90 bp TTCTGGCCACGGGCAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTCGATCACCTTCTCTTaGTGCCGCACAGTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: FWPRAKHSWLKSRRSQGLSITFS*CRTVSS
Trigger: GGAGGAGACTGTGCGGCACCAAGAGAAGGTGATCGA...AAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTGCCCGTGGCCAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CCA 90 bp TTGGTAATGGAGCAGGAATGGGAGCCTAGGACTCCTGACCCCCAGCCCTGGAGTGCTGAGTCCTCTAACTaGCTTTCCAGGGACAGGATC +
Preference number: 4 (lower is better)
Translates to: LVMEQEWEPRTPDPQPWSAESSN*LSRDRI
Trigger: GATCCTGTCCCTGGAAAGCCAGTTAGAGGACTCAGC...ACTCCAGGGCTGGGGGTCAGGAGTCCTAGGCTCCCATTCCTGCTCCATTACCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CCA 90 bp GTGTCAGGGCATCCTGGAGATGCCTGCATGGACCCCTCATCCACAGTCATCTCCGCTGAGTCCTCTAACTaGCTTTCCAGGGACAGGATC +
Preference number: 4 (lower is better)
Translates to: VSGHPGDACMDPSSTVISAESSN*LSRDRI
Trigger: GATCCTGTCCCTGGAAAGCCAGTTAGAGGACTCAGC...GGAGATGACTGTGGATGAGGGGTCCATGCAGGCATCTCCAGGATGCCCTGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CCA 90 bp TTCTGGCCACGGGCAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTCCCCAGCCCTGGAGTTaGCTCCACAATGGCTTTTCT +
Preference number: 4 (lower is better)
Translates to: FWPRAKHSWLKSRRSQGLPQPWS*LHNGFS
Trigger: AGAAAAGCCATTGTGGAGCCAACTCCAGGGCTGGGG...AAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTGCCCGTGGCCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CCA 90 bp TTGGTAATGGAGCAGGAATGGGAGCCTAGGACTCCTGACCCCCAGCCCTGGAGTGTAATGGAGCAGGAATaGGAGCCTAGGACTCCTGAC +
Preference number: 4 (lower is better)
Translates to: LVMEQEWEPRTPDPQPWSVMEQE*EPRTPD
Trigger: GTCAGGAGTCCTAGGCTCCCATTCCTGCTCCATTAC...ACTCCAGGGCTGGGGGTCAGGAGTCCTAGGCTCCCATTCCTGCTCCATTACCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CCA 90 bp CATTCCCAGGGGGTGACCTGCTCAAGGGCATATTGCCTGACAAACCAGGCCTCAGTGGAGCCTACATCGTaGCCATCTGAGAAGGGTGTG +
Preference number: 4 (lower is better)
Translates to: HSQGVTCSRAYCLTNQASVEPTS*PSEKGV
Trigger: CACACCCTTCTCAGATGGCCACGATGTAGGCTCCAC...TGAGGCCTGGTTTGTCAGGCAATATGCCCTTGAGCAGGTCACCCCCTGGGAATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CCA 90 bp CGGGCAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGTGGAGCCTACATCGTaGCCATCTGAGAAGGGTGTG +
Preference number: 4 (lower is better)
Translates to: RAKHSWLKSRRSQGLCFAVEPTS*PSEKGV
Trigger: CACACCCTTCTCAGATGGCCACGATGTAGGCTCCAC...CGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTGCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CCA 90 bp CAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCGTGGAGCCTACATCGTaGCCATCTGAGAAGGGTGTG +
Preference number: 4 (lower is better)
Translates to: QSTAGSRAGEVRVFALRGVEPTS*PSEKGV
Trigger: CACACCCTTCTCAGATGGCCACGATGTAGGCTCCAC...GCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CCA 90 bp GTGTCAGGGCATCCTGGAGATGCCTGCATGGACCCCTCATCCACAGTCATCTCCGGGAAGTTGGCAAAGTaGAGCCTACATCGTGGCCAT +
Preference number: 4 (lower is better)
Translates to: VSGHPGDACMDPSSTVISGKLAK*SLHRGH
Trigger: ATGGCCACGATGTAGGCTCCACTTTGCCAACTTCCC...GGAGATGACTGTGGATGAGGGGTCCATGCAGGCATCTCCAGGATGCCCTGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CCA 90 bp AACTTGAGGGGCAGTTGTGAGCAGGCCTGTTTGTTCTCGGGAAGTTGGCAAAGTCCGCTGCTGAGCTTCTaGCCACGGGCAAAGCACAGC +
Preference number: 4 (lower is better)
Translates to: NLRGSCEQACLFSGSWQSPLLSF*PRAKHS
Trigger: GCTGTGCTTTGCCCGTGGCCAGAAGCTCAGCAGCGG...ACTTTGCCAACTTCCCGAGAACAAACAGGCCTGCTCACAACTGCCCCTCAAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CCA 90 bp CAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTTAGCGGTCTCCTTCTaGGGGCTCAAGGGCTTGTTG +
Preference number: 4 (lower is better)
Translates to: QSTAGSRAGEVRVFALRGLAVSF*GLKGLL
Trigger: CAACAAGCCCTTGAGCCCCCAGAAGGAGACCGCTAA...GCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CCA 90 bp TTCTGGCCACGGGCAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTTAGCGGTCTCCTTCTaGGGGCTCAAGGGCTTGTTG +
Preference number: 4 (lower is better)
Translates to: FWPRAKHSWLKSRRSQGLLAVSF*GLKGLL
Trigger: CAACAAGCCCTTGAGCCCCCAGAAGGAGACCGCTAA...AAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTGCCCGTGGCCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR TCA 90 bp TCCACAGTCATCTCCTTGAGTTTCACAGCACCCCATGGGGGAAAGGGTAGTTTTCCTGTTGCTGCAGAATaGTGGGGGCCTGCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: STVISLSFTAPHGGKGSFPVAAE*WGPAGG
Trigger: GCCACCAGCAGGCCCCCATCATTCTGCAGCAACAGG...AAAACTACCCTTTCCCCCATGGGGTGCTGTGAAACTCAAGGAGATGACTGTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR TCA 90 bp ACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGGCGGAGGTTGAACTTGTCTaGAGTACCAGAGAGGAGATC +
Preference number: 4 (lower is better)
Translates to: TAGSRAGEVRVFALRGWAEVELV*STREEI
Trigger: GATCTCCTCTCTGGTACTTCAGACAAGTTCAACCTC...CGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR TCA 90 bp TTCTGGCCACGGGCAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTGCTTGGCCAGGAGGTTaGACTTGTCTGAAGTACCAG +
Preference number: 4 (lower is better)
Translates to: FWPRAKHSWLKSRRSQGLAWPGG*TCLKYQ
Trigger: CTGGTACTTCAGACAAGTTCAACCTCCTGGCCAAGC...AAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTGCCCGTGGCCAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR TCA 90 bp TCAGGGCATCCTGGAGATGCCTGCATGGACCCCTCATCCACAGTCATCTCCTTGGCTTGGCCAGGAGGTTaGACTTGTCTGAAGTACCAG +
Preference number: 4 (lower is better)
Translates to: SGHPGDACMDPSSTVISLAWPGG*TCLKYQ
Trigger: CTGGTACTTCAGACAAGTTCAACCTCCTGGCCAAGC...CAAGGAGATGACTGTGGATGAGGGGTCCATGCAGGCATCTCCAGGATGCCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR TCA 90 bp CGGGCAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGCTTGGCCAGGAGGTTaGACTTGTCTGAAGTACCAG +
Preference number: 4 (lower is better)
Translates to: RAKHSWLKSRRSQGLCFAAWPGG*TCLKYQ
Trigger: CTGGTACTTCAGACAAGTTCAACCTCCTGGCCAAGC...CGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTGCCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR TCA 90 bp CTGGCCACGGGCAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGAGTTCGAGGGGTGCCTaGAACCTTTTTCTTGCTCCT +
Preference number: 4 (lower is better)
Translates to: LATGKAQLAQEQEKSGSLSSRGA*NLFLAP
Trigger: AGGAGCAAGAAAAAGGTTTCAGGCACCCCTCGAACT...CAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTGCCCGTGGCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR TCA 90 bp AAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGCCACAGTCATCTCCTTaGGTTTCACAGCACCCCATG +
Preference number: 4 (lower is better)
Translates to: KHSWLKSRRSQGLCFAGLPQSSP*VSQHPM
Trigger: CATGGGGTGCTGTGAAACTCAAGGAGATGACTGTGG...CAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR TCA 90 bp CTGAGAGTTAGCGGTCTCCTTCTGGGGGCTCAAGGGCTTGTTGAGCTTAGAGTCAAGCTACTCTGCCCATaGGCGCAGCCAGTCCTAAAG +
Preference number: 4 (lower is better)
Translates to: LRVSGLLLGAQGLVELRVKLLCP*AQPVLK
Trigger: CTTTAGGACTGGCTGCGCTCATGGGCAGAGTAGCTT...GACTCTAAGCTCAACAAGCCCTTGAGCCCCCAGAAGGAGACCGCTAACTCTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR TCA 90 bp CAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCCAAGGGCATATTGCCTaGCAAACCAGGCCTCAGAGT +
Preference number: 4 (lower is better)
Translates to: QSTAGSRAGEVRVFALRGQGHIA*QTRPQS
Trigger: ACTCTGAGGCCTGGTTTGTCAGGCAATATGCCCTTG...GCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR TCA 90 bp TCAGGGCATCCTGGAGATGCCTGCATGGACCCCTCATCCACAGTCATCTCCTTGCAAGGGCATATTGCCTaGCAAACCAGGCCTCAGAGT +
Preference number: 4 (lower is better)
Translates to: SGHPGDACMDPSSTVISLQGHIA*QTRPQS
Trigger: ACTCTGAGGCCTGGTTTGTCAGGCAATATGCCCTTG...CAAGGAGATGACTGTGGATGAGGGGTCCATGCAGGCATCTCCAGGATGCCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR TCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCTGCCCAGGGGCTGGTTaGGGGTCCACGGCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPCPGAG*GSTAGC
Trigger: GCAGCCAGCCGTGGACCCTCAACCAGCCCCTGGGCA...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000398814.8
ENST00000672175.1
CDS-3UTR GCA 90 bp GCTTCTGGCCACGGGCAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTCATTCTGCAAATGCTaGACCCTGTCCCTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: ASGHGQSTAGSRAGEVRVSFCKC*TLSLSF
Trigger: GAAACTGAGGGACAGGGTGCAGCATTTGCAGAATGA...GACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTGCCCGTGGCCAGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR GCA 90 bp TTGGTAATGGAGCAGGAATGGGAGCCTAGGACTCCTGACCCCCAGCCCTGGAGTAGCTCATTCTGCAAATaGTGCACCCTGTCCCTCAGT +
Preference number: 4 (lower is better)
Translates to: LVMEQEWEPRTPDPQPWSSSFCK*CTLSLS
Trigger: ACTGAGGGACAGGGTGCAGCATTTGCAGAATGAGCT...ACTCCAGGGCTGGGGGTCAGGAGTCCTAGGCTCCCATTCCTGCTCCATTACCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR GCA 90 bp CTGGCCACGGGCAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCGAATCAGCTCATTCTaGAAATGCTGCACCCTGTCC +
Preference number: 4 (lower is better)
Translates to: LATGKAQLAQEQEKSGSLRISSF*KCCTLS
Trigger: GGACAGGGTGCAGCATTTGCAGAATGAGCTGATTCG...CAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTGCCCGTGGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR GCA 90 bp TGTTCTCGGGAAGTTGGCAAAGTGGAGCCTACATCGTGGCCATCTGAGAAGGGTAGCTTGCCCTGGTACTaGTTCAGCAGAGCGGCCTGT +
Preference number: 4 (lower is better)
Translates to: CSREVGKVEPTSWPSEKGSLPWY*FSRAAC
Trigger: ACAGGCCGCTCTGCTGAAGCAGTACCAGGGCAAGCT...ACCCTTCTCAGATGGCCACGATGTAGGCTCCACTTTGCCAACTTCCCGAGAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR GCA 90 bp GCATCCTGGAGATGCCTGCATGGACCCCTCATCCACAGTCATCTCCTTGAGTTTAGCTTGCCCTGGTACTaGTTCAGCAGAGCGGCCTGT +
Preference number: 4 (lower is better)
Translates to: ASWRCLHGPLIHSHLLEFSLPWY*FSRAAC
Trigger: ACAGGCCGCTCTGCTGAAGCAGTACCAGGGCAAGCT...AAACTCAAGGAGATGACTGTGGATGAGGGGTCCATGCAGGCATCTCCAGGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR GCA 90 bp CTGCTGAGAGTTAGCGGTCTCCTTCTGGGGGCTCAAGGGCTTGTTGAGCTTAGAATCACCTTCTCTTGGTaGCGCACAGTCTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: LLRVSGLLLGAQGLVELRITFSW*RTVSSS
Trigger: GCTGGAGGAGACTGTGCGGCACCAAGAGAAGGTGAT...TCTAAGCTCAACAAGCCCTTGAGCCCCCAGAAGGAGACCGCTAACTCTCAGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR GCA 90 bp TCAGGGCATCCTGGAGATGCCTGCATGGACCCCTCATCCACAGTCATCTCCTTGCAGCTTCGCGTTTTCTaGCAGCAGCACCGAGTAAAG +
Preference number: 4 (lower is better)
Translates to: SGHPGDACMDPSSTVISLQLRVF*QQHRVK
Trigger: CTTTACTCGGTGCTGCTGGCAGAAAACGCGAAGCTG...CAAGGAGATGACTGTGGATGAGGGGTCCATGCAGGCATCTCCAGGATGCCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR GCA 90 bp TTCTGGCCACGGGCAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTCAGCTTCGCGTTTTCTaGCAGCAGCACCGAGTAAAG +
Preference number: 4 (lower is better)
Translates to: FWPRAKHSWLKSRRSQGLQLRVF*QQHRVK
Trigger: CTTTACTCGGTGCTGCTGGCAGAAAACGCGAAGCTG...AAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTGCCCGTGGCCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR GCA 90 bp TTTGTTCTCGGGAAGTTGGCAAAGTGGAGCCTACATCGTGGCCATCTGAGAAGGCGTGTGGCCAGATCCTaGTTCTCTCGTCCCCAGCGT +
Preference number: 4 (lower is better)
Translates to: FVLGKLAKWSLHRGHLRRRVARS*FSRPQR
Trigger: ACGCTGGGGACGAGAGAAGCAGGATCTGGCCACACG...CCTTCTCAGATGGCCACGATGTAGGCTCCACTTTGCCAACTTCCCGAGAACAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR GCA 90 bp AACTTGAGGGGCAGTTGTGAGCAGGCCTGTTTGTTCTCGGGAAGTTGGCAAAGTCGTGTGGCCAGATCCTaGTTCTCTCGTCCCCAGCGT +
Preference number: 4 (lower is better)
Translates to: NLRGSCEQACLFSGSWQSRVARS*FSRPQR
Trigger: ACGCTGGGGACGAGAGAAGCAGGATCTGGCCACACG...ACTTTGCCAACTTCCCGAGAACAAACAGGCCTGCTCACAACTGCCCCTCAAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR GCA 90 bp TTCCCAGGGGGTGACCTGCTCAAGGGCATATTGCCTGACAAACCAGGCCTCAGACTGAAACCTTTTTCTTaGTCCTGCAGCCGTGTGGCC +
Preference number: 4 (lower is better)
Translates to: FPGGDLLKGILPDKPGLRLKPFS*SCSRVA
Trigger: GGCCACACGGCTGCAGGAGCAAGAAAAAGGTTTCAG...TCTGAGGCCTGGTTTGTCAGGCAATATGCCCTTGAGCAGGTCACCCCCTGGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR GCA 90 bp AAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGCTGAAACCTTTTTCTTaGTCCTGCAGCCGTGTGGCC +
Preference number: 4 (lower is better)
Translates to: KHSWLKSRRSQGLCFAGLLKPFS*SCSRVA
Trigger: GGCCACACGGCTGCAGGAGCAAGAAAAAGGTTTCAG...CAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR GCA 90 bp CCGGGGTTGAACTTGAGGGGCAGTTGTGAGCAGGCCTGTTTGTTCTCGGGAAGTCTGAAACCTTTTTCTTaGTCCTGCAGCCGTGTGGCC +
Preference number: 4 (lower is better)
Translates to: PGLNLRGSCEQACLFSGSLKPFS*SCSRVA
Trigger: GGCCACACGGCTGCAGGAGCAAGAAAAAGGTTTCAG...ACTTCCCGAGAACAAACAGGCCTGCTCACAACTGCCCCTCAAGTTCAACCCCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR GCA 90 bp TTTGTTCTCGGGAAGTTGGCAAAGTGGAGCCTACATCGTGGCCATCTGAGAAGGGGGCACTCTGTGGTGTaGAAAGCGGGGTGCGTGAGT +
Preference number: 4 (lower is better)
Translates to: FVLGKLAKWSLHRGHLRRGHSVV*KAGCVS
Trigger: ACTCACGCACCCCGCTTTGCACACCACAGAGTGCCC...CCTTCTCAGATGGCCACGATGTAGGCTCCACTTTGCCAACTTCCCGAGAACAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CCA 90 bp TCAGGGCATCCTGGAGATGCCTGCATGGACCCCTCATCCACAGTCATCTCCTTGGCAGTTTCTGCTTCATaGACACCGTGTTCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: SGHPGDACMDPSSTVISLAVSAS*TPCSGP
Trigger: AGGCCCAGAACACGGTGTCCATGAAGCAGAAACTGC...CAAGGAGATGACTGTGGATGAGGGGTCCATGCAGGCATCTCCAGGATGCCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CCA 90 bp TTTGTTCTCGGGAAGTTGGCAAAGTGGAGCCTACATCGTGGCCATCTGAGAAGGACTTTGGGGGTGCGGTaGCTTCCTGCTCCACCACCT +
Preference number: 4 (lower is better)
Translates to: FVLGKLAKWSLHRGHLRRTLGVR*LPAPPP
Trigger: AGGTGGTGGAGCAGGAAGCCACCGCACCCCCAAAGT...CCTTCTCAGATGGCCACGATGTAGGCTCCACTTTGCCAACTTCCCGAGAACAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CCA 90 bp TTCTGGCCACGGGCAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTGAGTTGGCTCCACAATaGCTTTTCTCAGGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: FWPRAKHSWLKSRRSQGLELAPQ*LFSGPS
Trigger: ACTGGGCCCTGAGAAAAGCCATTGTGGAGCCAACTC...AAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTGCCCGTGGCCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CCA 90 bp AAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGAGTTGGCTCCACAATaGCTTTTCTCAGGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: KHSWLKSRRSQGLCFAGLELAPQ*LFSGPS
Trigger: ACTGGGCCCTGAGAAAAGCCATTGTGGAGCCAACTC...CAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CCA 90 bp TTCTGGCCACGGGCAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTGTAATGGAGCAGGAATaGGAGCCTAGGACTCCTGAC +
Preference number: 4 (lower is better)
Translates to: FWPRAKHSWLKSRRSQGLVMEQE*EPRTPD
Trigger: GTCAGGAGTCCTAGGCTCCCATTCCTGCTCCATTAC...AAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTGCCCGTGGCCAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CCA 90 bp CTGCTGAGAGTTAGCGGTCTCCTTCTGGGGGCTCAAGGGCTTGTTGAGCTTAGACTGGAGATGCCTGCATaGACCCCTCATCCACAGTCA +
Preference number: 4 (lower is better)
Translates to: LLRVSGLLLGAQGLVELRLEMPA*TPHPQS
Trigger: TGACTGTGGATGAGGGGTCCATGCAGGCATCTCCAG...TCTAAGCTCAACAAGCCCTTGAGCCCCCAGAAGGAGACCGCTAACTCTCAGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CCA 90 bp CTGAGAGTTAGCGGTCTCCTTCTGGGGGCTCAAGGGCTTGTTGAGCTTAGAGTCCTGGAGATGCCTGCATaGACCCCTCATCCACAGTCA +
Preference number: 4 (lower is better)
Translates to: LRVSGLLLGAQGLVELRVLEMPA*TPHPQS
Trigger: TGACTGTGGATGAGGGGTCCATGCAGGCATCTCCAG...GACTCTAAGCTCAACAAGCCCTTGAGCCCCCAGAAGGAGACCGCTAACTCTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CCA 90 bp CTGAGAGTTAGCGGTCTCCTTCTGGGGGCTCAAGGGCTTGTTGAGCTTAGAGTCGTGGAGCCTACATCGTaGCCATCTGAGAAGGGTGTG +
Preference number: 4 (lower is better)
Translates to: LRVSGLLLGAQGLVELRVVEPTS*PSEKGV
Trigger: CACACCCTTCTCAGATGGCCACGATGTAGGCTCCAC...GACTCTAAGCTCAACAAGCCCTTGAGCCCCCAGAAGGAGACCGCTAACTCTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CCA 90 bp CCGGGGTTGAACTTGAGGGGCAGTTGTGAGCAGGCCTGTTTGTTCTCGGGAAGTGGGAAGTTGGCAAAGTaGAGCCTACATCGTGGCCAT +
Preference number: 4 (lower is better)
Translates to: PGLNLRGSCEQACLFSGSGKLAK*SLHRGH
Trigger: ATGGCCACGATGTAGGCTCCACTTTGCCAACTTCCC...ACTTCCCGAGAACAAACAGGCCTGCTCACAACTGCCCCTCAAGTTCAACCCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CCA 90 bp GTCTCCTTCTGGGGGCTCAAGGGCTTGTTGAGCTTAGAGTCTGAGCTGGGCAGCGTATCCAGAATCCAGTaGGCCATGACCTGGCAAAGA +
Preference number: 4 (lower is better)
Translates to: VSFWGLKGLLSLESELGSVSRIQ*AMTWQR
Trigger: TCTTTGCCAGGTCATGGCCCACTGGATTCTGGATAC...GCTGCCCAGCTCAGACTCTAAGCTCAACAAGCCCTTGAGCCCCCAGAAGGAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CCA 90 bp AACTTGAGGGGCAGTTGTGAGCAGGCCTGTTTGTTCTCGGGAAGTTGGCAAAGTGAAGGAGGCCTGCTCTaGGGCTCAGGTCTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: NLRGSCEQACLFSGSWQSEGGLL*GSGLLR
Trigger: TCTCAGCAGACCTGAGCCCCAGAGCAGGCCTCCTTC...ACTTTGCCAACTTCCCGAGAACAAACAGGCCTGCTCACAACTGCCCCTCAAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CCA 90 bp TTGGTAATGGAGCAGGAATGGGAGCCTAGGACTCCTGACCCCCAGCCCTGGAGTTTGTTCTCGGGAAGTTaGCAAAGTGGAGCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: LVMEQEWEPRTPDPQPWSLFSGS*QSGASP
Trigger: AGGACTGGCTCCACTTTGCCAACTTCCCGAGAACAA...ACTCCAGGGCTGGGGGTCAGGAGTCCTAGGCTCCCATTCCTGCTCCATTACCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321374.9
ENST00000673517.1
CDS-3UTR TCA 90 bp TCCACAGTCATCTCCTTGAGTTTCACAGCACCCCATGGGGGAAAGGGTAGTTTTTGTGGCTGCTGGGCCTaGTACAGAAGGAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: STVISLSFTAPHGGKGSFCGCWA*YRRSSS
Trigger: GGAGCTGCTCCTTCTGTATCAGGCCCAGCAGCCACA...AAAACTACCCTTTCCCCCATGGGGTGCTGTGAAACTCAAGGAGATGACTGTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR TCA 90 bp GTGTCAGGGCATCCTGGAGATGCCTGCATGGACCCCTCATCCACAGTCATCTCCGAGGTTGAACTTGTCTaGAGTACCAGAGAGGAGATC +
Preference number: 4 (lower is better)
Translates to: VSGHPGDACMDPSSTVISEVELV*STREEI
Trigger: GATCTCCTCTCTGGTACTTCAGACAAGTTCAACCTC...GGAGATGACTGTGGATGAGGGGTCCATGCAGGCATCTCCAGGATGCCCTGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR TCA 90 bp AGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGGAGGTTGAACTTGTCTaGAGTACCAGAGAGGAGATC +
Preference number: 4 (lower is better)
Translates to: STAGSRAGEVRVFALRGWEVELV*STREEI
Trigger: GATCTCCTCTCTGGTACTTCAGACAAGTTCAACCTC...CCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR TCA 90 bp TCGGGAAGTTGGCAAAGTGGAGCCAGTCCTAAAGCACAGTGTCAGGGCATCCTGGCTTGGCCAGGAGGTTaGACTTGTCTGAAGTACCAG +
Preference number: 4 (lower is better)
Translates to: SGSWQSGASPKAQCQGILAWPGG*TCLKYQ
Trigger: CTGGTACTTCAGACAAGTTCAACCTCCTGGCCAAGC...CAGGATGCCCTGACACTGTGCTTTAGGACTGGCTCCACTTTGCCAACTTCCCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321374.9
ENST00000673517.1
CDS-3UTR TCA 90 bp CGGGCAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGAGTTCGAGGGGTGCCTaGAACCTTTTTCTTGCTCCT +
Preference number: 4 (lower is better)
Translates to: RAKHSWLKSRRSQGLCFASSRGA*NLFLAP
Trigger: AGGAGCAAGAAAAAGGTTTCAGGCACCCCTCGAACT...CGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTGCCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR TCA 90 bp AAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGAGTTCGAGGGGTGCCTaGAACCTTTTTCTTGCTCCT +
Preference number: 4 (lower is better)
Translates to: KHSWLKSRRSQGLCFAGLSSRGA*NLFLAP
Trigger: AGGAGCAAGAAAAAGGTTTCAGGCACCCCTCGAACT...CAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR TCA 90 bp AGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGTACATCGTGGCCATCTaGGAAGGGTGTGCTAATTTG +
Preference number: 4 (lower is better)
Translates to: STAGSRAGEVRVFALRGWYIVAI*EGCANL
Trigger: CAAATTAGCACACCCTTCTCAGATGGCCACGATGTA...CCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR TCA 90 bp GCATCCTGGAGATGCCTGCATGGACCCCTCATCCACAGTCATCTCCTTGAGTTTCTTGAGGGGCAGTTGTaGGCAGGCCTGTTTGTTCTC +
Preference number: 4 (lower is better)
Translates to: ASWRCLHGPLIHSHLLEFLEGQL*AGLFVL
Trigger: GAGAACAAACAGGCCTGCTCACAACTGCCCCTCAAG...AAACTCAAGGAGATGACTGTGGATGAGGGGTCCATGCAGGCATCTCCAGGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR TCA 90 bp TGTTCTCGGGAAGTTGGCAAAGTGGAGCCTACATCGTGGCCATCTGAGAAGGGTCTTGAGGGGCAGTTGTaGGCAGGCCTGTTTGTTCTC +
Preference number: 4 (lower is better)
Translates to: CSREVGKVEPTSWPSEKGLEGQL*AGLFVL
Trigger: GAGAACAAACAGGCCTGCTCACAACTGCCCCTCAAG...ACCCTTCTCAGATGGCCACGATGTAGGCTCCACTTTGCCAACTTCCCGAGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR TCA 90 bp AGTTGGCAAAGTGGAGCCAGTCCTAAAGCACAGTGTCAGGGCATCCTGGAGATGCTTGAGGGGCAGTTGTaGGCAGGCCTGTTTGTTCTC +
Preference number: 4 (lower is better)
Translates to: SWQSGASPKAQCQGILEMLEGQL*AGLFVL
Trigger: GAGAACAAACAGGCCTGCTCACAACTGCCCCTCAAG...CATCTCCAGGATGCCCTGACACTGTGCTTTAGGACTGGCTCCACTTTGCCAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321374.9
ENST00000673517.1
CDS-3UTR TCA 90 bp TCCACAGTCATCTCCTTGAGTTTCACAGCACCCCATGGGGGAAAGGGTAGTTTTGGGGCTCAGGTCTGCTaGGAGTTAGCGGTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: STVISLSFTAPHGGKGSFGAQVC*ELAVSF
Trigger: GAAGGAGACCGCTAACTCTCAGCAGACCTGAGCCCC...AAAACTACCCTTTCCCCCATGGGGTGCTGTGAAACTCAAGGAGATGACTGTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR GCA 90 bp AACTTGAGGGGCAGTTGTGAGCAGGCCTGTTTGTTCTCGGGAAGTTGGCAAAGTGGCGGCTCCTCAGTATaGGGTTCTCTCCTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: NLRGSCEQACLFSGSWQSGGSSV*GSLLPG
Trigger: TCCTGGAAGGAGAGAACCGCATACTGAGGAGCCGCC...ACTTTGCCAACTTCCCGAGAACAAACAGGCCTGCTCACAACTGCCCCTCAAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR GCA 90 bp GTCTCCTTCTGGGGGCTCAAGGGCTTGTTGAGCTTAGAGTCTGAGCTGGGCAGCTCATTCTGCAAATGCTaGACCCTGTCCCTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: VSFWGLKGLLSLESELGSSFCKC*TLSLSF
Trigger: GAAACTGAGGGACAGGGTGCAGCATTTGCAGAATGA...GCTGCCCAGCTCAGACTCTAAGCTCAACAAGCCCTTGAGCCCCCAGAAGGAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR GCA 90 bp GTGTCAGGGCATCCTGGAGATGCCTGCATGGACCCCTCATCCACAGTCATCTCCTCATTCTGCAAATGCTaGACCCTGTCCCTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: VSGHPGDACMDPSSTVISSFCKC*TLSLSF
Trigger: GAAACTGAGGGACAGGGTGCAGCATTTGCAGAATGA...GGAGATGACTGTGGATGAGGGGTCCATGCAGGCATCTCCAGGATGCCCTGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR GCA 90 bp CCGGGGTTGAACTTGAGGGGCAGTTGTGAGCAGGCCTGTTTGTTCTCGGGAAGTAGCTCATTCTGCAAATaGTGCACCCTGTCCCTCAGT +
Preference number: 4 (lower is better)
Translates to: PGLNLRGSCEQACLFSGSSSFCK*CTLSLS
Trigger: ACTGAGGGACAGGGTGCAGCATTTGCAGAATGAGCT...ACTTCCCGAGAACAAACAGGCCTGCTCACAACTGCCCCTCAAGTTCAACCCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR GCA 90 bp CAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCCGAATCAGCTCATTCTaGAAATGCTGCACCCTGTCC +
Preference number: 4 (lower is better)
Translates to: QSTAGSRAGEVRVFALRGRISSF*KCCTLS
Trigger: GGACAGGGTGCAGCATTTGCAGAATGAGCTGATTCG...GCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR GCA 90 bp TCAGGGCATCCTGGAGATGCCTGCATGGACCCCTCATCCACAGTCATCTCCTTGCGAATCAGCTCATTCTaGAAATGCTGCACCCTGTCC +
Preference number: 4 (lower is better)
Translates to: SGHPGDACMDPSSTVISLRISSF*KCCTLS
Trigger: GGACAGGGTGCAGCATTTGCAGAATGAGCTGATTCG...CAAGGAGATGACTGTGGATGAGGGGTCCATGCAGGCATCTCCAGGATGCCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR GCA 90 bp TGTTCTCGGGAAGTTGGCAAAGTGGAGCCTACATCGTGGCCATCTGAGAAGGGTAGCGCCTTCATCTTCTaGAGCTTGCCCTGGTACTGC +
Preference number: 4 (lower is better)
Translates to: CSREVGKVEPTSWPSEKGSAFIF*SLPWYC
Trigger: GCAGTACCAGGGCAAGCTGCAGAAGATGAAGGCGCT...ACCCTTCTCAGATGGCCACGATGTAGGCTCCACTTTGCCAACTTCCCGAGAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR GCA 90 bp GCATCCTGGAGATGCCTGCATGGACCCCTCATCCACAGTCATCTCCTTGAGTTTATCACCTTCTCTTGGTaGCGCACAGTCTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: ASWRCLHGPLIHSHLLEFITFSW*RTVSSS
Trigger: GCTGGAGGAGACTGTGCGGCACCAAGAGAAGGTGAT...AAACTCAAGGAGATGACTGTGGATGAGGGGTCCATGCAGGCATCTCCAGGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR GCA 90 bp CTGCTGAGAGTTAGCGGTCTCCTTCTGGGGGCTCAAGGGCTTGTTGAGCTTAGACAGCTTCGCGTTTTCTaGCAGCAGCACCGAGTAAAG +
Preference number: 4 (lower is better)
Translates to: LLRVSGLLLGAQGLVELRQLRVF*QQHRVK
Trigger: CTTTACTCGGTGCTGCTGGCAGAAAACGCGAAGCTG...TCTAAGCTCAACAAGCCCTTGAGCCCCCAGAAGGAGACCGCTAACTCTCAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR GCA 90 bp CATCCTGGAGATGCCTGCATGGACCCCTCATCCACAGTCATCTCCTTGAGTTTCAGAATGATGGGGGCCTaGTGGTGGCGGTTCTTATCC +
Preference number: 4 (lower is better)
Translates to: HPGDACMDPSSTVISLSFRMMGA*WWRFLS
Trigger: GGATAAGAACCGCCACCAGCAGGCCCCCATCATTCT...GAAACTCAAGGAGATGACTGTGGATGAGGGGTCCATGCAGGCATCTCCAGGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR GCA 90 bp GCATCCTGGAGATGCCTGCATGGACCCCTCATCCACAGTCATCTCCTTGAGTTTCCTTTTTCTTGCTCCTaGAGCCGTGTGGCCAGATCC +
Preference number: 4 (lower is better)
Translates to: ASWRCLHGPLIHSHLLEFPFSCS*SRVARS
Trigger: GGATCTGGCCACACGGCTGCAGGAGCAAGAAAAAGG...AAACTCAAGGAGATGACTGTGGATGAGGGGTCCATGCAGGCATCTCCAGGATGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR GCA 90 bp AAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGTGCTCAAGGGCATATTaGCTGACAAACCAGGCCTCA +
Preference number: 4 (lower is better)
Translates to: KHSWLKSRRSQGLCFAGLCSRAY*LTNQAS
Trigger: TGAGGCCTGGTTTGTCAGGCAATATGCCCTTGAGCA...CAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR GCA 90 bp TCCACAGTCATCTCCTTGAGTTTCACAGCACCCCATGGGGGAAAGGGTAGTTTTGGGCACTCTGTGGTGTaGAAAGCGGGGTGCGTGAGT +
Preference number: 4 (lower is better)
Translates to: STVISLSFTAPHGGKGSFGHSVV*KAGCVS
Trigger: ACTCACGCACCCCGCTTTGCACACCACAGAGTGCCC...AAAACTACCCTTTCCCCCATGGGGTGCTGTGAAACTCAAGGAGATGACTGTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CCA 90 bp GCATCCTGGAGATGCCTGCATGGACCCCTCATCCACAGTCATCTCCTTGAGTTTTCGATCACCTTCTCTTaGTGCCGCACAGTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: ASWRCLHGPLIHSHLLEFSITFS*CRTVSS
Trigger: GGAGGAGACTGTGCGGCACCAAGAGAAGGTGATCGA...AAACTCAAGGAGATGACTGTGGATGAGGGGTCCATGCAGGCATCTCCAGGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CCA 90 bp AACTTGAGGGGCAGTTGTGAGCAGGCCTGTTTGTTCTCGGGAAGTTGGCAAAGTATGATGGGGGCCTGCTaGTGGCGGTTCTTATCCAGC +
Preference number: 4 (lower is better)
Translates to: NLRGSCEQACLFSGSWQSMMGAC*WRFLSS
Trigger: GCTGGATAAGAACCGCCACCAGCAGGCCCCCATCAT...ACTTTGCCAACTTCCCGAGAACAAACAGGCCTGCTCACAACTGCCCCTCAAGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CCA 90 bp CTGAGAGTTAGCGGTCTCCTTCTGGGGGCTCAAGGGCTTGTTGAGCTTAGAGTCGCTGAGTCCTCTAACTaGCTTTCCAGGGACAGGATC +
Preference number: 4 (lower is better)
Translates to: LRVSGLLLGAQGLVELRVAESSN*LSRDRI
Trigger: GATCCTGTCCCTGGAAAGCCAGTTAGAGGACTCAGC...GACTCTAAGCTCAACAAGCCCTTGAGCCCCCAGAAGGAGACCGCTAACTCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CCA 90 bp TGTTCTCGGGAAGTTGGCAAAGTGGAGCCTACATCGTGGCCATCTGAGAAGGGTCCCCAGCCCTGGAGTTaGCTCCACAATGGCTTTTCT +
Preference number: 4 (lower is better)
Translates to: CSREVGKVEPTSWPSEKGPQPWS*LHNGFS
Trigger: AGAAAAGCCATTGTGGAGCCAACTCCAGGGCTGGGG...ACCCTTCTCAGATGGCCACGATGTAGGCTCCACTTTGCCAACTTCCCGAGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CCA 90 bp AACTTGAGGGGCAGTTGTGAGCAGGCCTGTTTGTTCTCGGGAAGTTGGCAAAGTAGTGTCAGGGCATCCTaGAGATGCCTGCATGGACCC +
Preference number: 4 (lower is better)
Translates to: NLRGSCEQACLFSGSWQSSVRAS*RCLHGP
Trigger: GGGTCCATGCAGGCATCTCCAGGATGCCCTGACACT...ACTTTGCCAACTTCCCGAGAACAAACAGGCCTGCTCACAACTGCCCCTCAAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CCA 90 bp TCAGGGCATCCTGGAGATGCCTGCATGGACCCCTCATCCACAGTCATCTCCTTGGTATCCAGAATCCAGTaGGCCATGACCTGGCAAAGA +
Preference number: 4 (lower is better)
Translates to: SGHPGDACMDPSSTVISLVSRIQ*AMTWQR
Trigger: TCTTTGCCAGGTCATGGCCCACTGGATTCTGGATAC...CAAGGAGATGACTGTGGATGAGGGGTCCATGCAGGCATCTCCAGGATGCCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CCA 90 bp CATCCTGGAGATGCCTGCATGGACCCCTCATCCACAGTCATCTCCTTGAGTTTCTTAGCGGTCTCCTTCTaGGGGCTCAAGGGCTTGTTG +
Preference number: 4 (lower is better)
Translates to: HPGDACMDPSSTVISLSFLAVSF*GLKGLL
Trigger: CAACAAGCCCTTGAGCCCCCAGAAGGAGACCGCTAA...GAAACTCAAGGAGATGACTGTGGATGAGGGGTCCATGCAGGCATCTCCAGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
3UTR CAA 72 bp CTTAGACAGGTGGGGGAATTAAGACCGAGCCTTCGGTaGGTAATGGAGCAGGAATGGGAGCCTAGGACTCCT +
Preference number: 4 (lower is better)
Translates to: LRQVGELRPSLR*VMEQEWEPRTP
Trigger: AGGAGTCCTAGGCTCCCATTCCTGCTCCATTACCAACCGAAGGCTCGGTCTTAATTCCCCCACCTGTCTAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR TCA 90 bp CCGGGGTTGAACTTGAGGGGCAGTTGTGAGCAGGCCTGTTTGTTCTCGGGAAGTGAGGTTGAACTTGTCTaGAGTACCAGAGAGGAGATC +
Preference number: 4 (lower is better)
Translates to: PGLNLRGSCEQACLFSGSEVELV*STREEI
Trigger: GATCTCCTCTCTGGTACTTCAGACAAGTTCAACCTC...ACTTCCCGAGAACAAACAGGCCTGCTCACAACTGCCCCTCAAGTTCAACCCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR TCA 90 bp CTGAGAGTTAGCGGTCTCCTTCTGGGGGCTCAAGGGCTTGTTGAGCTTAGAGTCAGTTCGAGGGGTGCCTaGAACCTTTTTCTTGCTCCT +
Preference number: 4 (lower is better)
Translates to: LRVSGLLLGAQGLVELRVSSRGA*NLFLAP
Trigger: AGGAGCAAGAAAAAGGTTTCAGGCACCCCTCGAACT...GACTCTAAGCTCAACAAGCCCTTGAGCCCCCAGAAGGAGACCGCTAACTCTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR TCA 90 bp GCATCCTGGAGATGCCTGCATGGACCCCTCATCCACAGTCATCTCCTTGAGTTTCCACAGTCATCTCCTTaGGTTTCACAGCACCCCATG +
Preference number: 4 (lower is better)
Translates to: ASWRCLHGPLIHSHLLEFPQSSP*VSQHPM
Trigger: CATGGGGTGCTGTGAAACTCAAGGAGATGACTGTGG...AAACTCAAGGAGATGACTGTGGATGAGGGGTCCATGCAGGCATCTCCAGGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR TCA 90 bp CATTCCCAGGGGGTGACCTGCTCAAGGGCATATTGCCTGACAAACCAGGCCTCATACATCGTGGCCATCTaGGAAGGGTGTGCTAATTTG +
Preference number: 4 (lower is better)
Translates to: HSQGVTCSRAYCLTNQASYIVAI*EGCANL
Trigger: CAAATTAGCACACCCTTCTCAGATGGCCACGATGTA...TGAGGCCTGGTTTGTCAGGCAATATGCCCTTGAGCAGGTCACCCCCTGGGAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR TCA 90 bp TTCTGGCCACGGGCAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTACATCGTGGCCATCTaGGAAGGGTGTGCTAATTTG +
Preference number: 4 (lower is better)
Translates to: FWPRAKHSWLKSRRSQGLYIVAI*EGCANL
Trigger: CAAATTAGCACACCCTTCTCAGATGGCCACGATGTA...AAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTGCCCGTGGCCAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR TCA 90 bp CGGGCAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGTTTTGCCACAGCAGGTaGCACCTAATTTCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: RAKHSWLKSRRSQGLCFAFCHSR*HLISPR
Trigger: CCTTGGAGAAATTAGGTGTCACCTGCTGTGGCAAAA...CGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTGCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR TCA 90 bp TTCCCAGGGGGTGACCTGCTCAAGGGCATATTGCCTGACAAACCAGGCCTCAGATTTTGCCACAGCAGGTaGCACCTAATTTCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: FPGGDLLKGILPDKPGLRFCHSR*HLISPR
Trigger: CCTTGGAGAAATTAGGTGTCACCTGCTGTGGCAAAA...TCTGAGGCCTGGTTTGTCAGGCAATATGCCCTTGAGCAGGTCACCCCCTGGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR TCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCGGGAGCCGCTCCACGTaGAGCCCGTCCAAGCCTTTC +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPGSRST*SPSKPF
Trigger: GAAAGGCTTGGACGGGCTTCACGTGGAGCGGCTCCC...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000398814.8
ENST00000672175.1
CDS-3UTR GCA 90 bp CCTCAGAGTATCCAGAATCCAGTGGGCCATGACCTGGCAAAGATTTCTAAACCCTCTCTCCTTCCAGGATaGTGGCCTGTCTCCGCAGAG +
Preference number: 4 (lower is better)
Translates to: PQSIQNPVGHDLAKISKPSLLPG*WPVSAE
Trigger: CTCTGCGGAGACAGGCCAGCATCCTGGAAGGAGAGA...GGGTTTAGAAATCTTTGCCAGGTCATGGCCCACTGGATTCTGGATACTCTGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR GCA 90 bp CAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTCATTCTGCAAATGCTaGACCCTGTCCCTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: QSTAGSRAGEVRVFALRGSFCKC*TLSLSF
Trigger: GAAACTGAGGGACAGGGTGCAGCATTTGCAGAATGA...GCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR GCA 90 bp TCCACAGTCATCTCCTTGAGTTTCACAGCACCCCATGGGGGAAAGGGTAGTTTTAGAGAGGAGATCCTGTaGGGGCAGGGTCTCTGTGCA +
Preference number: 4 (lower is better)
Translates to: STVISLSFTAPHGGKGSFREEIL*GQGLCA
Trigger: TGCACAGAGACCCTGCCCGCACAGGATCTCCTCTCT...AAAACTACCCTTTCCCCCATGGGGTGCTGTGAAACTCAAGGAGATGACTGTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000268082.4
ENST00000673214.1
CDS-3UTR GCA 90 bp TCCACAGTCATCTCCTTGAGTTTCACAGCACCCCATGGGGGAAAGGGTAGTTTTAGAAGTCAGGGTCTTTaGTTTGCGGGGCTGGGCGGT +
Preference number: 4 (lower is better)
Translates to: STVISLSFTAPHGGKGSFRSQGL*FAGLGG
Trigger: ACCGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCT...AAAACTACCCTTTCCCCCATGGGGTGCTGTGAAACTCAAGGAGATGACTGTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR GCA 90 bp CTGCTGAGAGTTAGCGGTCTCCTTCTGGGGGCTCAAGGGCTTGTTGAGCTTAGATGCTCAAGGGCATATTaGCTGACAAACCAGGCCTCA +
Preference number: 4 (lower is better)
Translates to: LLRVSGLLLGAQGLVELRCSRAY*LTNQAS
Trigger: TGAGGCCTGGTTTGTCAGGCAATATGCCCTTGAGCA...TCTAAGCTCAACAAGCCCTTGAGCCCCCAGAAGGAGACCGCTAACTCTCAGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CCA 90 bp TGTTCTCGGGAAGTTGGCAAAGTGGAGCCTACATCGTGGCCATCTGAGAAGGGTGCAGTTTCTGCTTCATaGACACCGTGTTCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: CSREVGKVEPTSWPSEKGAVSAS*TPCSGP
Trigger: AGGCCCAGAACACGGTGTCCATGAAGCAGAAACTGC...ACCCTTCTCAGATGGCCACGATGTAGGCTCCACTTTGCCAACTTCCCGAGAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CCA 90 bp AGTTGGCAAAGTGGAGCCAGTCCTAAAGCACAGTGTCAGGGCATCCTGGAGATGGCAGTTTCTGCTTCATaGACACCGTGTTCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: SWQSGASPKAQCQGILEMAVSAS*TPCSGP
Trigger: AGGCCCAGAACACGGTGTCCATGAAGCAGAAACTGC...CATCTCCAGGATGCCCTGACACTGTGCTTTAGGACTGGCTCCACTTTGCCAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321374.9
ENST00000673517.1
CDS-3UTR CCA 90 bp GCATCCTGGAGATGCCTGCATGGACCCCTCATCCACAGTCATCTCCTTGAGTTTGCTGAGTCCTCTAACTaGCTTTCCAGGGACAGGATC +
Preference number: 4 (lower is better)
Translates to: ASWRCLHGPLIHSHLLEFAESSN*LSRDRI
Trigger: GATCCTGTCCCTGGAAAGCCAGTTAGAGGACTCAGC...AAACTCAAGGAGATGACTGTGGATGAGGGGTCCATGCAGGCATCTCCAGGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CCA 90 bp CATCCTGGAGATGCCTGCATGGACCCCTCATCCACAGTCATCTCCTTGAGTTTCGCTGAGTCCTCTAACTaGCTTTCCAGGGACAGGATC +
Preference number: 4 (lower is better)
Translates to: HPGDACMDPSSTVISLSFAESSN*LSRDRI
Trigger: GATCCTGTCCCTGGAAAGCCAGTTAGAGGACTCAGC...GAAACTCAAGGAGATGACTGTGGATGAGGGGTCCATGCAGGCATCTCCAGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CCA 90 bp TGTTCTCGGGAAGTTGGCAAAGTGGAGCCTACATCGTGGCCATCTGAGAAGGGTGAGTTGGCTCCACAATaGCTTTTCTCAGGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: CSREVGKVEPTSWPSEKGELAPQ*LFSGPS
Trigger: ACTGGGCCCTGAGAAAAGCCATTGTGGAGCCAACTC...ACCCTTCTCAGATGGCCACGATGTAGGCTCCACTTTGCCAACTTCCCGAGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CCA 90 bp CGGGCAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGTTGTTCTCGGGAAGTTaGCAAAGTGGAGCCTACATC +
Preference number: 4 (lower is better)
Translates to: RAKHSWLKSRRSQGLCFALFSGS*QSGAYI
Trigger: GATGTAGGCTCCACTTTGCCAACTTCCCGAGAACAA...CGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTGCCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CCA 90 bp CATTCCCAGGGGGTGACCTGCTCAAGGGCATATTGCCTGACAAACCAGGCCTCATTGTTCTCGGGAAGTTaGCAAAGTGGAGCCTACATC +
Preference number: 4 (lower is better)
Translates to: HSQGVTCSRAYCLTNQASLFSGS*QSGAYI
Trigger: GATGTAGGCTCCACTTTGCCAACTTCCCGAGAACAA...TGAGGCCTGGTTTGTCAGGCAATATGCCCTTGAGCAGGTCACCCCCTGGGAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CCA 90 bp TTCCCAGGGGGTGACCTGCTCAAGGGCATATTGCCTGACAAACCAGGCCTCAGATTGTTCTCGGGAAGTTaGCAAAGTGGAGCCTACATC +
Preference number: 4 (lower is better)
Translates to: FPGGDLLKGILPDKPGLRLFSGS*QSGAYI
Trigger: GATGTAGGCTCCACTTTGCCAACTTCCCGAGAACAA...TCTGAGGCCTGGTTTGTCAGGCAATATGCCCTTGAGCAGGTCACCCCCTGGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCTGGGTGGAAGGGCCTTaGGGGTTGAGGGCCATGGCC +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPWVEGP*GLRAMA
Trigger: GGCCATGGCCCTCAACCCCCAAGGCCCTTCCACCCA...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000398814.8
ENST00000672175.1
CDS-3UTR CCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCGGGGTCCCCCAGGCTTaGACAGCTGAGGGCATCCGT +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPGVPQA*TAEGIR
Trigger: ACGGATGCCCTCAGCTGTCCAAGCCTGGGGGACCCC...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000398814.8
ENST00000672175.1
CDS-3UTR CCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCGAGATGCCCAGGGGCTaGTTGAGGGTCCACGGCTGG +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPEMPRG*LRVHGW
Trigger: CCAGCCGTGGACCCTCAACCAGCCCCTGGGCATCTC...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000398814.8
ENST00000672175.1
CDS-3UTR TCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCCCTGTTGCTGCAGAATaGTGGGGGCCTGCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPPVAAE*WGPAGG
Trigger: GCCACCAGCAGGCCCCCATCATTCTGCAGCAACAGG...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000398814.8
ENST00000672175.1
ENST00000673214.1
CDS-3UTR TCA 90 bp AACTTGAGGGGCAGTTGTGAGCAGGCCTGTTTGTTCTCGGGAAGTTGGCAAAGTGCTTGGCCAGGAGGTTaGACTTGTCTGAAGTACCAG +
Preference number: 4 (lower is better)
Translates to: NLRGSCEQACLFSGSWQSAWPGG*TCLKYQ
Trigger: CTGGTACTTCAGACAAGTTCAACCTCCTGGCCAAGC...ACTTTGCCAACTTCCCGAGAACAAACAGGCCTGCTCACAACTGCCCCTCAAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR TCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCGACAGGATCCGGCTCTaGGCGTGTTCCAGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPDRIRL*ACSSLA
Trigger: GGCCAAGCTGGAACACGCTCAGAGCCGGATCCTGTC...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000398814.8
ENST00000672175.1
ENST00000673214.1
CDS-3UTR TCA 90 bp TGTTCTCGGGAAGTTGGCAAAGTGGAGCCTACATCGTGGCCATCTGAGAAGGGTAGTTCGAGGGGTGCCTaGAACCTTTTTCTTGCTCCT +
Preference number: 4 (lower is better)
Translates to: CSREVGKVEPTSWPSEKGSSRGA*NLFLAP
Trigger: AGGAGCAAGAAAAAGGTTTCAGGCACCCCTCGAACT...ACCCTTCTCAGATGGCCACGATGTAGGCTCCACTTTGCCAACTTCCCGAGAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR TCA 90 bp TTTGTTCTCGGGAAGTTGGCAAAGTGGAGCCTACATCGTGGCCATCTGAGAAGGCAAGGGCATATTGCCTaGCAAACCAGGCCTCAGAGT +
Preference number: 4 (lower is better)
Translates to: FVLGKLAKWSLHRGHLRRQGHIA*QTRPQS
Trigger: ACTCTGAGGCCTGGTTTGTCAGGCAATATGCCCTTG...CCTTCTCAGATGGCCACGATGTAGGCTCCACTTTGCCAACTTCCCGAGAACAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR TCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCTCAGGCTGGTGTCCATaGTGGGGAGCCGCTCCACGT +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPSGWCP*WGAAPR
Trigger: ACGTGGAGCGGCTCCCCATCATGGACACCAGCCTGA...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000398814.8
ENST00000672175.1
CDS-3UTR GCA 90 bp GCATCCTGGAGATGCCTGCATGGACCCCTCATCCACAGTCATCTCCTTGAGTTTCGAATCAGCTCATTCTaGAAATGCTGCACCCTGTCC +
Preference number: 4 (lower is better)
Translates to: ASWRCLHGPLIHSHLLEFRISSF*KCCTLS
Trigger: GGACAGGGTGCAGCATTTGCAGAATGAGCTGATTCG...AAACTCAAGGAGATGACTGTGGATGAGGGGTCCATGCAGGCATCTCCAGGATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR GCA 90 bp TCCACAGTCATCTCCTTGAGTTTCACAGCACCCCATGGGGGAAAGGGTAGTTTTAGCGCCTTCATCTTCTaGAGCTTGCCCTGGTACTGC +
Preference number: 4 (lower is better)
Translates to: STVISLSFTAPHGGKGSFSAFIF*SLPWYC
Trigger: GCAGTACCAGGGCAAGCTGCAGAAGATGAAGGCGCT...AAAACTACCCTTTCCCCCATGGGGTGCTGTGAAACTCAAGGAGATGACTGTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR GCA 90 bp TCCACAGTCATCTCCTTGAGTTTCACAGCACCCCATGGGGGAAAGGGTAGTTTTATCACCTTCTCTTGGTaGCGCACAGTCTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: STVISLSFTAPHGGKGSFITFSW*RTVSSS
Trigger: GCTGGAGGAGACTGTGCGGCACCAAGAGAAGGTGAT...AAAACTACCCTTTCCCCCATGGGGTGCTGTGAAACTCAAGGAGATGACTGTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR GCA 90 bp TTTGTTCTCGGGAAGTTGGCAAAGTGGAGCCTACATCGTGGCCATCTGAGAAGGCAGCTTCGCGTTTTCTaGCAGCAGCACCGAGTAAAG +
Preference number: 4 (lower is better)
Translates to: FVLGKLAKWSLHRGHLRRQLRVF*QQHRVK
Trigger: CTTTACTCGGTGCTGCTGGCAGAAAACGCGAAGCTG...CCTTCTCAGATGGCCACGATGTAGGCTCCACTTTGCCAACTTCCCGAGAACAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR GCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCGGCAGGGCCTGTTGCTaGAGAATGATGGGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPGRACC*RMMGAC
Trigger: GCAGGCCCCCATCATTCTGCAGCAACAGGCCCTGCC...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000398814.8
ENST00000672175.1
ENST00000673214.1
CDS-3UTR GCA 90 bp AACTTGAGGGGCAGTTGTGAGCAGGCCTGTTTGTTCTCGGGAAGTTGGCAAAGTCTGAAACCTTTTTCTTaGTCCTGCAGCCGTGTGGCC +
Preference number: 4 (lower is better)
Translates to: NLRGSCEQACLFSGSWQSLKPFS*SCSRVA
Trigger: GGCCACACGGCTGCAGGAGCAAGAAAAAGGTTTCAG...ACTTTGCCAACTTCCCGAGAACAAACAGGCCTGCTCACAACTGCCCCTCAAGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR GCA 90 bp TCCACAGTCATCTCCTTGAGTTTCACAGCACCCCATGGGGGAAAGGGTAGTTTTCATCCTGGAGATGCCTaGATGGACCCCTCATCCACA +
Preference number: 4 (lower is better)
Translates to: STVISLSFTAPHGGKGSFHPGDA*MDPSST
Trigger: TGTGGATGAGGGGTCCATGCAGGCATCTCCAGGATG...AAAACTACCCTTTCCCCCATGGGGTGCTGTGAAACTCAAGGAGATGACTGTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR GCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCTCCGGCAGGGCCTGTTaGTGCAGAATGATGGGGGCC +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPSGRAC*CRMMGA
Trigger: GGCCCCCATCATTCTGCAGCAACAGGCCCTGCCGGA...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000398814.8
ENST00000672175.1
CDS-3UTR GCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCATGTGGTCTCAGGGGTaGCACACACCAGCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPMWSQG*HTPALG
Trigger: CCCCAGGGCTGGTGTGTGGCACCCCTGAGACCACAT...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000398814.8
ENST00000672175.1
CDS-3UTR CCA 90 bp CCTCAGAGTATCCAGAATCCAGTGGGCCATGACCTGGCAAAGATTTCTAAACCCCTGCCATCTTCTGCATaGCCCGCCGGTAGTTGTTCA +
Preference number: 4 (lower is better)
Translates to: PQSIQNPVGHDLAKISKPLPSSA*PAGSCS
Trigger: TGAACAACTACCGGCGGGCCATGCAGAAGATGGCAG...GGGTTTAGAAATCTTTGCCAGGTCATGGCCCACTGGATTCTGGATACTCTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CCA 90 bp TCCACAGTCATCTCCTTGAGTTTCACAGCACCCCATGGGGGAAAGGGTAGTTTTCTGCCATCTTCTGCATaGCCCGCCGGTAGTTGTTCA +
Preference number: 4 (lower is better)
Translates to: STVISLSFTAPHGGKGSFLPSSA*PAGSCS
Trigger: TGAACAACTACCGGCGGGCCATGCAGAAGATGGCAG...AAAACTACCCTTTCCCCCATGGGGTGCTGTGAAACTCAAGGAGATGACTGTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCTCTTCCTCCTCCTGCTaGGCCAGGCGGCTCCTCAGT +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPSSSSC*ARRLLS
Trigger: ACTGAGGAGCCGCCTGGCCCAGCAGGAGGAGGAAGA...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000398814.8
ENST00000672175.1
ENST00000673214.1
CDS-3UTR CCA 90 bp AACTTGAGGGGCAGTTGTGAGCAGGCCTGTTTGTTCTCGGGAAGTTGGCAAAGTGCAGTTTCTGCTTCATaGACACCGTGTTCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: NLRGSCEQACLFSGSWQSAVSAS*TPCSGP
Trigger: AGGCCCAGAACACGGTGTCCATGAAGCAGAAACTGC...ACTTTGCCAACTTCCCGAGAACAAACAGGCCTGCTCACAACTGCCCCTCAAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCCAGCAGAGCGGCCTGTaGCTGCTGGGCCTGATACAG +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPQQSGL*LLGLIQ
Trigger: CTGTATCAGGCCCAGCAGCCACAGGCCGCTCTGCTG...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000398814.8
ENST00000672175.1
ENST00000673214.1
CDS-3UTR CCA 90 bp TCCACAGTCATCTCCTTGAGTTTCACAGCACCCCATGGGGGAAAGGGTAGTTTTTCGATCACCTTCTCTTaGTGCCGCACAGTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: STVISLSFTAPHGGKGSFSITFS*CRTVSS
Trigger: GGAGGAGACTGTGCGGCACCAAGAGAAGGTGATCGA...AAAACTACCCTTTCCCCCATGGGGTGCTGTGAAACTCAAGGAGATGACTGTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CCA 90 bp TTTGTTCTCGGGAAGTTGGCAAAGTGGAGCCTACATCGTGGCCATCTGAGAAGGGAGTTGGCTCCACAATaGCTTTTCTCAGGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: FVLGKLAKWSLHRGHLRRELAPQ*LFSGPS
Trigger: ACTGGGCCCTGAGAAAAGCCATTGTGGAGCCAACTC...CCTTCTCAGATGGCCACGATGTAGGCTCCACTTTGCCAACTTCCCGAGAACAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCTTTGCTTTGCGGGGCTaGGCGGTCCCGGGGTTGAAC +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPFALRG*AVPGLN
Trigger: GTTCAACCCCGGGACCGCCCAGCCCCGCAAAGCAAA...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000268082.4
ENST00000673214.1
CDS-3UTR CCA 90 bp TCCACAGTCATCTCCTTGAGTTTCACAGCACCCCATGGGGGAAAGGGTAGTTTTCGGGCAAAGCACAGCTaGCTCAAGAGCAGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: STVISLSFTAPHGGKGSFRAKHS*LKSRRS
Trigger: ACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTGCCCG...AAAACTACCCTTTCCCCCATGGGGTGCTGTGAAACTCAAGGAGATGACTGTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCCAGCGAGATGGTCTGTaGGTGGAAGGGCCTTGGGGG +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPQRDGL*VEGPWG
Trigger: CCCCCAAGGCCCTTCCACCCACAGACCATCTCGCTG...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000398814.8
ENST00000672175.1
CDS-3UTR CCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCTCAGGTTCCGTGCTCTaGGAGGCGATCAGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPSGSVL*EAIRGS
Trigger: GGAGCCCCTGATCGCCTCCCAGAGCACGGAACCTGA...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000398814.8
ENST00000672175.1
CDS-3UTR TCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCTGTGGCTGCTGGGCCTaGTACAGAAGGAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPCGCWA*YRRSSS
Trigger: GGAGCTGCTCCTTCTGTATCAGGCCCAGCAGCCACA...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000398814.8
ENST00000672175.1
ENST00000673214.1
CDS-3UTR TCA 90 bp CATCCTGGAGATGCCTGCATGGACCCCTCATCCACAGTCATCTCCTTGAGTTTCGAGGTTGAACTTGTCTaGAGTACCAGAGAGGAGATC +
Preference number: 4 (lower is better)
Translates to: HPGDACMDPSSTVISLSFEVELV*STREEI
Trigger: GATCTCCTCTCTGGTACTTCAGACAAGTTCAACCTC...GAAACTCAAGGAGATGACTGTGGATGAGGGGTCCATGCAGGCATCTCCAGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR TCA 90 bp AACTTGAGGGGCAGTTGTGAGCAGGCCTGTTTGTTCTCGGGAAGTTGGCAAAGTAGTTCGAGGGGTGCCTaGAACCTTTTTCTTGCTCCT +
Preference number: 4 (lower is better)
Translates to: NLRGSCEQACLFSGSWQSSSRGA*NLFLAP
Trigger: AGGAGCAAGAAAAAGGTTTCAGGCACCCCTCGAACT...ACTTTGCCAACTTCCCGAGAACAAACAGGCCTGCTCACAACTGCCCCTCAAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR TCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCGTTGAGCTTAGAGTCTaGGCTGGGCAGCAGGGGCTC +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPVELRV*AGQQGL
Trigger: GAGCCCCTGCTGCCCAGCTCAGACTCTAAGCTCAAC...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000398814.8
ENST00000672175.1
ENST00000673214.1
CDS-3UTR TCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCGGGGCTCAGGTCTGCTaGGAGTTAGCGGTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPGAQVC*ELAVSF
Trigger: GAAGGAGACCGCTAACTCTCAGCAGACCTGAGCCCC...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000398814.8
ENST00000672175.1
ENST00000673214.1
CDS-3UTR TCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCTGGCCAGGGGCTCGTTaGCTCCCCGGAGAAAGATCT +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPWPGAR*LPGERS
Trigger: AGATCTTTCTCCGGGGAGTCAACGAGCCCCTGGCCA...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000398814.8
ENST00000672175.1
CDS-3UTR TCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCGGCATCCGTTCTGGCTaGCGCGAGGCACGTCAAAGT +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPGIRSG*REARQS
Trigger: ACTTTGACGTGCCTCGCGTCAGCCAGAACGGATGCC...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000398814.8
ENST00000672175.1
CDS-3UTR GCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCCGTGTGGCCAGATCCTaGTTCTCTCGTCCCCAGCGT +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPRVARS*FSRPQR
Trigger: ACGCTGGGGACGAGAGAAGCAGGATCTGGCCACACG...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000398814.8
ENST00000672175.1
ENST00000673214.1
CDS-3UTR GCA 90 bp TCCACAGTCATCTCCTTGAGTTTCACAGCACCCCATGGGGGAAAGGGTAGTTTTCTGAAACCTTTTTCTTaGTCCTGCAGCCGTGTGGCC +
Preference number: 4 (lower is better)
Translates to: STVISLSFTAPHGGKGSFLKPFS*SCSRVA
Trigger: GGCCACACGGCTGCAGGAGCAAGAAAAAGGTTTCAG...AAAACTACCCTTTCCCCCATGGGGTGCTGTGAAACTCAAGGAGATGACTGTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR GCA 90 bp TGTTCTCGGGAAGTTGGCAAAGTGGAGCCTACATCGTGGCCATCTGAGAAGGGTATGGAGTTCGAGGGGTaGCTGAAACCTTTTTCTTGC +
Preference number: 4 (lower is better)
Translates to: CSREVGKVEPTSWPSEKGMEFEG*LKPFSC
Trigger: GCAAGAAAAAGGTTTCAGGCACCCCTCGAACTCCAT...ACCCTTCTCAGATGGCCACGATGTAGGCTCCACTTTGCCAACTTCCCGAGAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR GCA 90 bp GCATCCTGGAGATGCCTGCATGGACCCCTCATCCACAGTCATCTCCTTGAGTTTATGGAGTTCGAGGGGTaGCTGAAACCTTTTTCTTGC +
Preference number: 4 (lower is better)
Translates to: ASWRCLHGPLIHSHLLEFMEFEG*LKPFSC
Trigger: GCAAGAAAAAGGTTTCAGGCACCCCTCGAACTCCAT...AAACTCAAGGAGATGACTGTGGATGAGGGGTCCATGCAGGCATCTCCAGGATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR GCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCCGATCTCAGGTTCCGTaGTCTGGGAGGCGATCAGGG +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPRSQVP*SGRRSG
Trigger: CCCTGATCGCCTCCCAGAGCACGGAACCTGAGATCG...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000398814.8
ENST00000672175.1
CDS-3UTR CCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCATGGGGGCCTGCTGGTaGCGGTTCTTATCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPMGACW*RFLSSS
Trigger: GGAGCTGGATAAGAACCGCCACCAGCAGGCCCCCAT...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000398814.8
ENST00000672175.1
ENST00000673214.1
CDS-3UTR CCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCGCTCCTGCAGCCGTGTaGCCAGATCCTGCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPAPAAV*PDPASL
Trigger: GAGAGAAGCAGGATCTGGCCACACGGCTGCAGGAGC...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000398814.8
ENST00000672175.1
ENST00000673214.1
CDS-3UTR CCA 90 bp TCCACAGTCATCTCCTTGAGTTTCACAGCACCCCATGGGGGAAAGGGTAGTTTTGGGAAGTTGGCAAAGTaGAGCCTACATCGTGGCCAT +
Preference number: 4 (lower is better)
Translates to: STVISLSFTAPHGGKGSFGKLAK*SLHRGH
Trigger: ATGGCCACGATGTAGGCTCCACTTTGCCAACTTCCC...AAAACTACCCTTTCCCCCATGGGGTGCTGTGAAACTCAAGGAGATGACTGTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CCA 90 bp CATCCTGGAGATGCCTGCATGGACCCCTCATCCACAGTCATCTCCTTGAGTTTCTTGTTCTCGGGAAGTTaGCAAAGTGGAGCCTACATC +
Preference number: 4 (lower is better)
Translates to: HPGDACMDPSSTVISLSFLFSGS*QSGAYI
Trigger: GATGTAGGCTCCACTTTGCCAACTTCCCGAGAACAA...GAAACTCAAGGAGATGACTGTGGATGAGGGGTCCATGCAGGCATCTCCAGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCGAAGGAGGCCTGCTCTaGGGCTCAGGTCTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPEGGLL*GSGLLR
Trigger: TCTCAGCAGACCTGAGCCCCAGAGCAGGCCTCCTTC...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000398814.8
ENST00000672175.1
ENST00000673214.1
CDS-3UTR CCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCGATAGGGAAGGACAGTaGGGTGATGGGCAGCCCCAC +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPDREGQ*GDGQPH
Trigger: GTGGGGCTGCCCATCACCCCACTGTCCTTCCCTATC...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000398814.8
ENST00000672175.1
CDS-3UTR TCA 90 bp TTTGTTCTCGGGAAGTTGGCAAAGTGGAGCCTACATCGTGGCCATCTGAGAAGGTACATCGTGGCCATCTaGGAAGGGTGTGCTAATTTG +
Preference number: 4 (lower is better)
Translates to: FVLGKLAKWSLHRGHLRRYIVAI*EGCANL
Trigger: CAAATTAGCACACCCTTCTCAGATGGCCACGATGTA...CCTTCTCAGATGGCCACGATGTAGGCTCCACTTTGCCAACTTCCCGAGAACAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR GCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCTCTCTCCTTCCAGGATaGTGGCCTGTCTCCGCAGAG +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPSLLPG*WPVSAE
Trigger: CTCTGCGGAGACAGGCCAGCATCCTGGAAGGAGAGA...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000398814.8
ENST00000672175.1
ENST00000673214.1
CDS-3UTR GCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCGGCGGCTCCTCAGTATaGGGTTCTCTCCTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPGGSSV*GSLLPG
Trigger: TCCTGGAAGGAGAGAACCGCATACTGAGGAGCCGCC...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000398814.8
ENST00000672175.1
ENST00000673214.1
CDS-3UTR GCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCAGCTTGCCCTGGTACTaGTTCAGCAGAGCGGCCTGT +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPSLPWY*FSRAAC
Trigger: ACAGGCCGCTCTGCTGAAGCAGTACCAGGGCAAGCT...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000398814.8
ENST00000672175.1
ENST00000673214.1
CDS-3UTR GCA 90 bp TTTGTTCTCGGGAAGTTGGCAAAGTGGAGCCTACATCGTGGCCATCTGAGAAGGATGGAGTTCGAGGGGTaGCTGAAACCTTTTTCTTGC +
Preference number: 4 (lower is better)
Translates to: FVLGKLAKWSLHRGHLRRMEFEG*LKPFSC
Trigger: GCAAGAAAAAGGTTTCAGGCACCCCTCGAACTCCAT...CCTTCTCAGATGGCCACGATGTAGGCTCCACTTTGCCAACTTCCCGAGAACAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR GCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCAGGGCATCCTGGAGATaGCTGCATGGACCCCTCATC +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPRASWR*LHGPLI
Trigger: GATGAGGGGTCCATGCAGGCATCTCCAGGATGCCCT...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268082.4
ENST00000673214.1
CDS-3UTR GCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCTCCAGCTCTGAGGGCTaGTTGAGGTCCATGGAGTGG +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPSSSEG*LRSMEW
Trigger: CCACTCCATGGACCTCAAGCAGCCCTCAGAGCTGGA...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000398814.8
ENST00000672175.1
ENST00000673214.1
CDS-3UTR GCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCATCAGGAATCAGTCCTaGCCAGACAGCTGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPIRNQS*PDSWPG
Trigger: CCCAGGCCAGCTGTCTGGGCAGGACTGATTCCTGAT...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000398814.8
ENST00000672175.1
CDS-3UTR GCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCCCAGAGCCATGTGGTTaGAGCCGATGTAGCGGGGTA +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPPEPCG*SRCSGV
Trigger: TACCCCGCTACATCGGCTGCAACCACATGGCTCTGG...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000398814.8
ENST00000672175.1
CDS-3UTR CCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCCTCCTTCCAGGATGCTaGCCTGTCTCCGCAGAGACA +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPLLPGC*PVSAET
Trigger: TGTCTCTGCGGAGACAGGCCAGCATCCTGGAAGGAG...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000398814.8
ENST00000672175.1
ENST00000673214.1
CDS-3UTR CCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCATGGACACCGTGTTCTaGGCCTCACTGGCTTTGCCC +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPMDTVF*ASLALP
Trigger: GGGCAAAGCCAGTGAGGCCCAGAACACGGTGTCCAT...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000398814.8
ENST00000672175.1
ENST00000673214.1
CDS-3UTR CCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCATGATGGGGGCCTGCTaGTGGCGGTTCTTATCCAGC +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPMMGAC*WRFLSS
Trigger: GCTGGATAAGAACCGCCACCAGCAGGCCCCCATCAT...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000398814.8
ENST00000672175.1
ENST00000673214.1
CDS-3UTR CCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCGGTGGGAGCAGGTCCTaGATCTCTCAGCAGCGAGAT +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPGGSRS*ISQQRD
Trigger: ATCTCGCTGCTGAGAGATCCAGGACCTGCTCCCACC...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000398814.8
ENST00000672175.1
CDS-3UTR CCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCCCCAGACAGCTGGCCTaGGCGTCTTGGAGTCCTTAT +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPPRQLA*ASWSPY
Trigger: ATAAGGACTCCAAGACGCCCAGGCCAGCTGTCTGGG...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000398814.8
ENST00000672175.1
CDS-3UTR CCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCTCACCACTATGGGGTTaGGGTTGTTGGCCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPSPLWG*GCWPGA
Trigger: AGCCCCTGGCCAACAACCCCAACCCCATAGTGGTGA...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000398814.8
ENST00000672175.1
CDS-3UTR TCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCCTTGAGGGGCAGTTGTaGGCAGGCCTGTTTGTTCTC +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPLEGQL*AGLFVL
Trigger: GAGAACAAACAGGCCTGCTCACAACTGCCCCTCAAG...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000268082.4
ENST00000673214.1
CDS-3UTR TCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCTTAGAGGGAGACAGGTaGCCGATCTCAGGTTCCGTG +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPLEGDR*PISGSV
Trigger: CACGGAACCTGAGATCGGTCACCTGTCTCCCTCTAA...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000398814.8
ENST00000672175.1
CDS-3UTR TCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCCGATGTAGCGGGGTATaGAGCTGCTCTTCCGAACGA +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPRCSGV*SCSSER
Trigger: TCGTTCGGAAGAGCAGCTTCATACCCCGCTACATCG...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000398814.8
ENST00000672175.1
CDS-3UTR TCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCTGGAAGAGGAAGGACTaGTTCCACAGGGGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPWKRKD*FHRGCS
Trigger: AGAGCAGCCCCTGTGGAATCAGTCCTTCCTCTTCCA...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000398814.8
ENST00000672175.1
CDS-3UTR TCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCCAGGGCTGTGTCTTCTaGGAAGCTGGTAGCTCCATC +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPQGCVF*EAGSSI
Trigger: GATGGAGCTACCAGCTTCTCAGAAGACACAGCCCTG...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000398814.8
ENST00000672175.1
CDS-3UTR GCA 90 bp TCCACAGTCATCTCCTTGAGTTTCACAGCACCCCATGGGGGAAAGGGTAGTTTTTCATTCTGCAAATGCTaGACCCTGTCCCTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: STVISLSFTAPHGGKGSFSFCKC*TLSLSF
Trigger: GAAACTGAGGGACAGGGTGCAGCATTTGCAGAATGA...AAAACTACCCTTTCCCCCATGGGGTGCTGTGAAACTCAAGGAGATGACTGTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR GCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCAGCGCCTTCATCTTCTaGAGCTTGCCCTGGTACTGC +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPSAFIF*SLPWYC
Trigger: GCAGTACCAGGGCAAGCTGCAGAAGATGAAGGCGCT...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000398814.8
ENST00000672175.1
ENST00000673214.1
CDS-3UTR GCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCATCACCTTCTCTTGGTaGCGCACAGTCTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPITFSW*RTVSSS
Trigger: GCTGGAGGAGACTGTGCGGCACCAAGAGAAGGTGAT...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000398814.8
ENST00000672175.1
ENST00000673214.1
CDS-3UTR GCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCAGAATGATGGGGGCCTaGTGGTGGCGGTTCTTATCC +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPRMMGA*WWRFLS
Trigger: GGATAAGAACCGCCACCAGCAGGCCCCCATCATTCT...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000398814.8
ENST00000672175.1
ENST00000673214.1
CDS-3UTR GCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCCCTTTTTCTTGCTCCTaGAGCCGTGTGGCCAGATCC +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPPFSCS*SRVARS
Trigger: GGATCTGGCCACACGGCTGCAGGAGCAAGAAAAAGG...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000398814.8
ENST00000672175.1
ENST00000673214.1
CDS-3UTR GCA 90 bp TCCACAGTCATCTCCTTGAGTTTCACAGCACCCCATGGGGGAAAGGGTAGTTTTATGGAGTTCGAGGGGTaGCTGAAACCTTTTTCTTGC +
Preference number: 4 (lower is better)
Translates to: STVISLSFTAPHGGKGSFMEFEG*LKPFSC
Trigger: GCAAGAAAAAGGTTTCAGGCACCCCTCGAACTCCAT...AAAACTACCCTTTCCCCCATGGGGTGCTGTGAAACTCAAGGAGATGACTGTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR GCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCGGGTCCACGGCTGGCTaGCTTTCATTGAAGTTGAGG +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPGSTAG*LSLKLR
Trigger: CCTCAACTTCAATGAAAGGCAGCCAGCCGTGGACCC...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000398814.8
ENST00000672175.1
CDS-3UTR GCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCCTCGTGGAGTGGACGTaGTCAAGTCCATTGTGGAGC +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPLVEWT*SSPLWS
Trigger: GCTCCACAATGGACTTGAGCACGTCCACTCCACGAG...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000398814.8
ENST00000672175.1
CDS-3UTR GCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCCAGAGGTTCCTCCTCTaGTTCTCGTGGAGTGGACGT +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPQRFLL*FSWSGR
Trigger: ACGTCCACTCCACGAGAAGCAGAGGAGGAACCTCTG...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000398814.8
ENST00000672175.1
CDS-3UTR CCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCCTGCCATCTTCTGCATaGCCCGCCGGTAGTTGTTCA +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPLPSSA*PAGSCS
Trigger: TGAACAACTACCGGCGGGCCATGCAGAAGATGGCAG...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000398814.8
ENST00000672175.1
ENST00000673214.1
CDS-3UTR CCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCTCGATCACCTTCTCTTaGTGCCGCACAGTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPSITFS*CRTVSS
Trigger: GGAGGAGACTGTGCGGCACCAAGAGAAGGTGATCGA...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000398814.8
ENST00000672175.1
ENST00000673214.1
CDS-3UTR CCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCCGGGCAAAGCACAGCTaGCTCAAGAGCAGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPRAKHS*LKSRRS
Trigger: ACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTGCCCG...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268082.4
ENST00000673214.1
CDS-3UTR CCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCTTAGCGGTCTCCTTCTaGGGGCTCAAGGGCTTGTTG +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPLAVSF*GLKGLL
Trigger: CAACAAGCCCTTGAGCCCCCAGAAGGAGACCGCTAA...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000398814.8
ENST00000672175.1
ENST00000673214.1
CDS-3UTR CCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCAGGTTGGTAGCCCCATaGAGGGTGACCATGATGGTC +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPRLVAP*RVTMMV
Trigger: GACCATCATGGTCACCCTCCATGGGGCTACCAACCT...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000398814.8
ENST00000672175.1
CDS-3UTR CCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCACTGGGTCTTGGCAGTaGCTTCATCGGCTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPTGSWQ*LHRLSQ
Trigger: CTGGGAAAGCCGATGAAGCCACTGCCAAGACCCAGT...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000398814.8
ENST00000672175.1
CDS-3UTR CCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCCTCCTCTGCTTCTCGTaGAGTGGACGTGCTCAAGTC +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPLLCFS*SGRAQV
Trigger: GACTTGAGCACGTCCACTCCACGAGAAGCAGAGGAG...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000398814.8
ENST00000672175.1
CDS-3UTR CCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCTTGAGGTCCATGGAGTaGGTGAGGGCACTAGGCTGT +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPLRSME*VRALGC
Trigger: ACAGCCTAGTGCCCTCACCCACTCCATGGACCTCAA...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000398814.8
ENST00000672175.1
3UTR CAA 72 bp GTGGGCCATGACCTGGCAAAGATTTCTAAACCCATTTaGCCACAGCAGGTGACACCTAATTTCTCCAAGGGT +
Preference number: 4 (lower is better)
Translates to: VGHDLAKISKPI*PQQVTPNFSKG
Trigger: ACCCTTGGAGAAATTAGGTGTCACCTGCTGTGGCAAAATGGGTTTAGAAATCTTTGCCAGGTCATGGCCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR TCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCGCTTGGCCAGGAGGTTaGACTTGTCTGAAGTACCAG +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPAWPGG*TCLKYQ
Trigger: CTGGTACTTCAGACAAGTTCAACCTCCTGGCCAAGC...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000398814.8
ENST00000672175.1
ENST00000673214.1
CDS-3UTR TCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCCTTGGTATCAGTGGGTaGTCAGGAATCAGTCCTGCC +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPLGISG*SGISPA
Trigger: GGCAGGACTGATTCCTGATCACCCACTGATACCAAG...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000398814.8
ENST00000672175.1
CDS-3UTR GCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCCAGCTTCGCGTTTTCTaGCAGCAGCACCGAGTAAAG +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPQLRVF*QQHRVK
Trigger: CTTTACTCGGTGCTGCTGGCAGAAAACGCGAAGCTG...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000398814.8
ENST00000672175.1
ENST00000673214.1
CDS-3UTR GCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCCTGAAACCTTTTTCTTaGTCCTGCAGCCGTGTGGCC +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPLKPFS*SCSRVA
Trigger: GGCCACACGGCTGCAGGAGCAAGAAAAAGGTTTCAG...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000398814.8
ENST00000672175.1
ENST00000673214.1
CDS-3UTR GCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCCTTCCGAACGACTGTTaGGTACAACTGGGTCTTGGC +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPLPNDC*VQLGLG
Trigger: GCCAAGACCCAGTTGTACGCAACAGTCGTTCGGAAG...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000398814.8
ENST00000672175.1
CDS-3UTR CCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCGCAGTTTCTGCTTCATaGACACCGTGTTCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPAVSAS*TPCSGP
Trigger: AGGCCCAGAACACGGTGTCCATGAAGCAGAAACTGC...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000398814.8
ENST00000672175.1
ENST00000673214.1
CDS-3UTR CCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCGCTGAGTCCTCTAACTaGCTTTCCAGGGACAGGATC +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPAESSN*LSRDRI
Trigger: GATCCTGTCCCTGGAAAGCCAGTTAGAGGACTCAGC...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000398814.8
ENST00000672175.1
ENST00000673214.1
CDS-3UTR CCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCGAGTTGGCTCCACAATaGCTTTTCTCAGGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPELAPQ*LFSGPS
Trigger: ACTGGGCCCTGAGAAAAGCCATTGTGGAGCCAACTC...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268082.4
ENST00000673214.1
CDS-3UTR CCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCGTATGGAGGTCAATGTaGTCTCAGGGGTGCCACACA +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPVWRSM*SQGCHT
Trigger: TGTGTGGCACCCCTGAGACCACATTGACCTCCATAC...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000398814.8
ENST00000672175.1
CDS-3UTR CCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCCCTGCATCCTCAGCTTaGATCTCCACATTCACCGTG +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPPASSA*ISTFTV
Trigger: CACGGTGAATGTGGAGATCCAAGCTGAGGATGCAGG...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000398814.8
ENST00000672175.1
CDS-3UTR CCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCCGTACAACTGGGTCTTaGCAGTGGCTTCATCGGCTT +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPRTTGS*QWLHRL
Trigger: AAGCCGATGAAGCCACTGCCAAGACCCAGTTGTACG...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000398814.8
ENST00000672175.1
CDS-3UTR CCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCAGCTCACTGTGTCCTTaGACCAGGACTCTTGGATGG +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPSSLCP*TRTLGW
Trigger: CCATCCAAGAGTCCTGGTCCAAGGACACAGTGAGCT...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000398814.8
ENST00000672175.1
CDS-3UTR CCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCCTGCTTCTCGTGGAGTaGACGTGCTCAAGTCCATTG +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPLLLVE*TCSSPL
Trigger: CAATGGACTTGAGCACGTCCACTCCACGAGAAGCAG...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000398814.8
ENST00000672175.1
CDS-3UTR TCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCAGTTCGAGGGGTGCCTaGAACCTTTTTCTTGCTCCT +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPSSRGA*NLFLAP
Trigger: AGGAGCAAGAAAAAGGTTTCAGGCACCCCTCGAACT...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000398814.8
ENST00000672175.1
ENST00000673214.1
CDS-3UTR GCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCAGCTCATTCTGCAAATaGTGCACCCTGTCCCTCAGT +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPSSFCK*CTLSLS
Trigger: ACTGAGGGACAGGGTGCAGCATTTGCAGAATGAGCT...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000398814.8
ENST00000672175.1
ENST00000673214.1
CDS-3UTR GCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCCGAATCAGCTCATTCTaGAAATGCTGCACCCTGTCC +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPRISSF*KCCTLS
Trigger: GGACAGGGTGCAGCATTTGCAGAATGAGCTGATTCG...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000398814.8
ENST00000672175.1
ENST00000673214.1
CDS-3UTR GCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCTGCTCAAGGGCATATTaGCTGACAAACCAGGCCTCA +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPCSRAY*LTNQAS
Trigger: TGAGGCCTGGTTTGTCAGGCAATATGCCCTTGAGCA...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268082.4
ENST00000673214.1
CDS-3UTR GCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCCACATCTTCTTGCCCTaGATCCTCAGCTTGGATCTC +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPHIFLP*ILSLDL
Trigger: GAGATCCAAGCTGAGGATGCAGGGCAAGAAGATGTG...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000398814.8
ENST00000672175.1
CDS-3UTR GCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCAGGATCACATCTTCTTaGCCTGCATCCTCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPRITSS*PASSAW
Trigger: CCAAGCTGAGGATGCAGGGCAAGAAGATGTGATCCT...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000398814.8
ENST00000672175.1
CDS-3UTR CCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCACTGTTGCGTACAACTaGGTCTTGGCAGTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPTVAYN*VLAVAS
Trigger: TGAAGCCACTGCCAAGACCCAGTTGTACGCAACAGT...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000398814.8
ENST00000672175.1
CDS-3UTR CCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCTTGAGGGTCCACGGCTaGCTGCCTTTCATTGAAGTT +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPLRVHG*LPFIEV
Trigger: AACTTCAATGAAAGGCAGCCAGCCGTGGACCCTCAA...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000398814.8
ENST00000672175.1
CDS-3UTR TCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCGAGGTTGAACTTGTCTaGAGTACCAGAGAGGAGATC +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPEVELV*STREEI
Trigger: GATCTCCTCTCTGGTACTTCAGACAAGTTCAACCTC...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000398814.8
ENST00000672175.1
ENST00000673214.1
CDS-3UTR TCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCAGACACGCAGGTACTTaGTGGGGATTTTGTAGGACA +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPRHAGT*WGFCRT
Trigger: TGTCCTACAAAATCCCCATCAAGTACCTGCGTGTCT...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000398814.8
ENST00000672175.1
CDS-3UTR GCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCTCATTCTGCAAATGCTaGACCCTGTCCCTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPSFCKC*TLSLSF
Trigger: GAAACTGAGGGACAGGGTGCAGCATTTGCAGAATGA...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000398814.8
ENST00000672175.1
ENST00000673214.1
CDS-3UTR GCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCATGGAGTTCGAGGGGTaGCTGAAACCTTTTTCTTGC +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPMEFEG*LKPFSC
Trigger: GCAAGAAAAAGGTTTCAGGCACCCCTCGAACTCCAT...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000398814.8
ENST00000672175.1
ENST00000673214.1
CDS-3UTR GCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCGGTCACAGATGTGACTaGCTTGGAGCTCTGATTGTT +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPGHRCD*LGALIV
Trigger: AACAATCAGAGCTCCAAGGCAGTCACATCTGTGACC...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000398814.8
ENST00000672175.1
CDS-3UTR CCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCTTGGGGATGAGTACTTaGTATCAGTGGGTGATCAGG +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPLGMST*YQWVIR
Trigger: CCTGATCACCCACTGATACCAAGTACTCATCCCCAA...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000398814.8
ENST00000672175.1
CDS-3UTR CCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCGAGGCCAGGAGTGTCTaGCCTTGTTTAACAATCTTG +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPEARSV*PCLTIL
Trigger: CAAGATTGTTAAACAAGGCCAGACACTCCTGGCCTC...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000398814.8
ENST00000672175.1
CDS-3UTR CCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCAGGTCCCTGTTAGCCTaGCTGACCTTAAATTCCTTG +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPRSLLA*LTLNSL
Trigger: CAAGGAATTTAAGGTCAGCCAGGCTAACAGGGACCT...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000398814.8
ENST00000672175.1
CDS-3UTR CCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCCCTGTCAGCATCTTCTaGTACAAACGGCTCTTTAGC +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPPVSIF*YKRLFS
Trigger: GCTAAAGAGCCGTTTGTACCAGAAGATGCTGACAGG...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000398814.8
ENST00000672175.1
CDS-3UTR CCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCTTCATCTCTGTGTCATaGGACATCTCAGGCACCAGA +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPFISVS*DISGTR
Trigger: TCTGGTGCCTGAGATGTCCCATGACACAGAGATGAA...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000398814.8
ENST00000672175.1
CDS-3UTR CCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCGTCTTGGAGTCCTTATaGGTAGTAGACAGTATGGAG +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPVLESL*VVDSME
Trigger: CTCCATACTGTCTACTACCCATAAGGACTCCAAGAC...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000398814.8
ENST00000672175.1
CDS-3UTR CCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCAGTACTTGGTATCAGTaGGTGATCAGGAATCAGTCC +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPSTWYQ*VIRNQS
Trigger: GGACTGATTCCTGATCACCCACTGATACCAAGTACT...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000398814.8
ENST00000672175.1
CDS-3UTR CCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCACCAGGACTCTTGGATaGTTCTCAGCTTCTTATCCA +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPTRTLG*FSASYP
Trigger: TGGATAAGAAGCTGAGAACCATCCAAGAGTCCTGGT...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000398814.8
ENST00000672175.1
CDS-3UTR CCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCTTGGACCAGGACTCTTaGATGGTTCTCAGCTTCTTA +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPLDQDS*MVLSFL
Trigger: TAAGAAGCTGAGAACCATCCAAGAGTCCTGGTCCAA...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000398814.8
ENST00000672175.1
CDS-3UTR CCA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCAGCCTTGCTGTTGTTTaGTGTCAAGAAGTTTTCTGG +
Preference number: 4 (lower is better)
Translates to: TELQHLITSFLGGGDETPSLAVV*CQEVFW
Trigger: CCAGAAAACTTCTTGACACCAAACAACAGCAAGGCT...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000398814.8
ENST00000672175.1
CDS CCA 90 bp GCTGGGGCTCTGGGCATGGTGACATCAGTTCTGGCTGGCCAGCCCTaGGAGGGCTGTCTGAGACTGGAGGCTGAGGGCCCCGGTGGACGT +
Preference number: 5 (lower is better)
Translates to: AGALGMVTSVLAGQP*EGCLRLEAEGPGGR
Trigger: ACGTCCACCGGGGCCCTCAGCCTCCAGTCTCAGACAGCCCTCCCAGGGCTGGCCAGCCAGAACTGATGTCACCATGCCCAGAGCCCCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000560148.5
ENST00000635913.1
ENST00000671722.1
ENST00000672359.1
CDS GCA 90 bp TGGCCTCGGGTAGATGGGGAAGATGGCCTCACCCACCCGCTGGGCTaGCCGTCCCAAGGGTTCGTCCAGCCTCAGTGCCTCCACATGCAG +
Preference number: 5 (lower is better)
Translates to: WPRVDGEDGLTHPLG*PSQGFVQPQCLHMQ
Trigger: CTGCATGTGGAGGCACTGAGGCTGGACGAACCCTTGGGACGGGCAGCCCAGCGGGTGGGTGAGGCCATCTTCCCCATCTACCCGAGGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000559243.1
ENST00000560148.5
ENST00000635913.1
ENST00000671722.1
ENST00000672087.1
ENST00000672359.1
CDS CCA 90 bp CCTGAGCCTTTGGGTTCATGCGGGGTTGGTCTGGCCTCGGGTAGATaGGGAAGATGGCCTCACCCACCCGCTGGGCTGCCCGTCCCAAGG +
Preference number: 5 (lower is better)
Translates to: PEPLGSCGVGLASGR*GRWPHPPAGLPVPR
Trigger: CCTTGGGACGGGCAGCCCAGCGGGTGGGTGAGGCCATCTTCCCCATCTACCCGAGGCCAGACCAACCCCGCATGAACCCAAAGGCTCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000559243.1
ENST00000560148.5
ENST00000635913.1
ENST00000671722.1
ENST00000672087.1
ENST00000672359.1
CDS-3UTR CAA 90 bp TGGAGCAGGAATGGGAGCCTAGGACTCCTGACCCCCAGCCCTGGAGTTGGCTCCGTCAGGGTCTTTGCTTaGCGGGGCTGGGCGGTCCCG +
Preference number: 5 (lower is better)
Translates to: WSRNGSLGLLTPSPGVGSVRVFA*RGWAVP
Trigger: CGGGACCGCCCAGCCCCGCAAAGCAAAGACCCTGAC...GGAGCCAACTCCAGGGCTGGGGGTCAGGAGTCCTAGGCTCCCATTCCTGCTCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CAA 90 bp TCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGGCGGTCCCGGGGGTCAGGGTCTTTGCTTaGCGGGGCTGGGCGGTCCCG +
Preference number: 5 (lower is better)
Translates to: SRAGEVRVFALRGWAVPGVRVFA*RGWAVP
Trigger: CGGGACCGCCCAGCCCCGCAAAGCAAAGACCCTGAC...CCCCGGGACCGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS CCA 90 bp TTGGGTTCATGCGGGGTTGGTCTGGCCTCGGGTAGATGGGGAAGATaGCCTCACCCACCCGCTGGGCTGCCCGTCCCAAGGGTTCGTCCA +
Preference number: 5 (lower is better)
Translates to: LGSCGVGLASGRWGR*PHPPAGLPVPRVRP
Trigger: TGGACGAACCCTTGGGACGGGCAGCCCAGCGGGTGGGTGAGGCCATCTTCCCCATCTACCCGAGGCCAGACCAACCCCGCATGAACCCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000559243.1
ENST00000560148.5
ENST00000635913.1
ENST00000671722.1
ENST00000672087.1
ENST00000672359.1
CDS-3UTR CAA 90 bp GCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGGCGGTCGTCAGGGTCTTTGCTTaGCGGGGCTGGGCGGTCCCG +
Preference number: 5 (lower is better)
Translates to: AGSRAGEVRVFALRGWAVVRVFA*RGWAVP
Trigger: CGGGACCGCCCAGCCCCGCAAAGCAAAGACCCTGAC...GACCGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS GCA 90 bp CAGTGGCCCCTCGGTTGTTGCTGTAATGCTGGTCTCCTGTCTGTGTaGGGCACTGCAGATGTGGCGGGCAGGGGCTTGGGAGCTCTGGGG +
Preference number: 5 (lower is better)
Translates to: QWPLGCCCNAGLLSV*GTADVAGRGLGALG
Trigger: CCCCAGAGCTCCCAAGCCCCTGCCCGCCACATCTGCAGTGCCGCACACAGACAGGAGACCAGCATTACAGCAACAACCGAGGGGCCACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000558645.5
ENST00000560148.5
ENST00000671751.1
ENST00000672359.1
CDS GCA 90 bp CTTGCTTCTTCTCCGGGTCTGGAAGGGGCCCGTCTCCCTGGCCCCTaGTTTGGAAGGCCTCTTCTCTCCACCCTCCTGGGTCCACTGTGG +
Preference number: 5 (lower is better)
Translates to: LASSPGLEGARLPGP*FGRPLLSTLLGPLW
Trigger: CCACAGTGGACCCAGGAGGGTGGAGAGAAGAGGCCTTCCAAAGCAGGGGCCAGGGAGACGGGCCCCTTCCAGACCCGGAGAAGAAGCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558659.5
ENST00000673091.1
CDS CCA 90 bp CCAGGTGGGAGCAGGTCCTGGATCTCTCAGCAGCGAGATGGTCTGTaGGTGGAAGGGCCTTGGGGGTTGAGGGCCATGGCCAGCTGGACA +
Preference number: 5 (lower is better)
Translates to: PGGSRSWISQQRDGL*VEGPWGLRAMASWT
Trigger: TGTCCAGCTGGCCATGGCCCTCAACCCCCAAGGCCCTTCCACCCACAGACCATCTCGCTGCTGAGAGATCCAGGACCTGCTCCCACCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398814.8
ENST00000672175.1
CDS CCA 90 bp CAGGTCCTCGTGATCCTGAGCCTTTGGGTTCATGCGGGGTTGGTCTaGCCTCGGGTAGATGGGGAAGATGGCCTCACCCACCCGCTGGGC +
Preference number: 5 (lower is better)
Translates to: QVLVILSLWVHAGLV*PRVDGEDGLTHPLG
Trigger: GCCCAGCGGGTGGGTGAGGCCATCTTCCCCATCTACCCGAGGCCAGACCAACCCCGCATGAACCCAAAGGCTCAGGATCACGAGGACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000559243.1
ENST00000560148.5
ENST00000635913.1
ENST00000671722.1
ENST00000672087.1
ENST00000672359.1
CDS CCA 90 bp TTCTTCTCCGGGTCTGGAAGGGGCCCGTCTCCCTGGCCCCTGCTTTaGAAGGCCTCTTCTCTCCACCCTCCTGGGTCCACTGTGGCCCTT +
Preference number: 5 (lower is better)
Translates to: FFSGSGRGPSPWPLL*KASSLHPPGSTVAL
Trigger: AAGGGCCACAGTGGACCCAGGAGGGTGGAGAGAAGAGGCCTTCCAAAGCAGGGGCCAGGGAGACGGGCCCCTTCCAGACCCGGAGAAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558659.5
ENST00000673091.1
CDS-3UTR CAA 90 bp TGGAGCAGGAATGGGAGCCTAGGACTCCTGACCCCCAGCCCTGGAGTTGGCTCCTTCAGAGGAGGGGGCTaGCTCCTGTCCTGCAGCCTG +
Preference number: 5 (lower is better)
Translates to: WSRNGSLGLLTPSPGVGSFRGGG*LLSCSL
Trigger: CAGGCTGCAGGACAGGAGCAAGCCCCCTCCTCTGAA...GGAGCCAACTCCAGGGCTGGGGGTCAGGAGTCCTAGGCTCCCATTCCTGCTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CAA 90 bp GCTTCTGGCCACGGGCAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCGTCAGGGTCTTTGCTTaGCGGGGCTGGGCGGTCCCG +
Preference number: 5 (lower is better)
Translates to: ASGHGQSTAGSRAGEVRVVRVFA*RGWAVP
Trigger: CGGGACCGCCCAGCCCCGCAAAGCAAAGACCCTGAC...GACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTGCCCGTGGCCAGAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS GCA 90 bp CTTGGTGCCGCACAGTCTCCTCCAGCGCCTTCATCTTCTGCAGCTTaGCCTGGTACTGCTTCAGCAGAGCGGCCTGTGGCTGCTGGGCCT +
Preference number: 5 (lower is better)
Translates to: LGAAQSPPAPSSSAA*PGTASAERPVAAGP
Trigger: AGGCCCAGCAGCCACAGGCCGCTCTGCTGAAGCAGTACCAGGGCAAGCTGCAGAAGATGAAGGCGCTGGAGGAGACTGTGCGGCACCAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000398814.8
ENST00000558659.5
ENST00000558821.5
ENST00000560565.1
ENST00000672175.1
ENST00000672263.1
ENST00000673091.1
ENST00000673214.1
ENST00000673367.1
ENST00000673517.1
CDS GCA 90 bp ACCCACCCGCTGGGCTGCCCGTCCCAAGGGTTCGTCCAGCCTCAGTaGCTCCACATGCAGCTGAGCATCATGCTGCCCGTCATTCTTGCA +
Preference number: 5 (lower is better)
Translates to: THPLGCPSQGFVQPQ*LHMQLSIMLPVILA
Trigger: TGCAAGAATGACGGGCAGCATGATGCTCAGCTGCATGTGGAGGCACTGAGGCTGGACGAACCCTTGGGACGGGCAGCCCAGCGGGTGGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000559243.1
ENST00000560148.5
ENST00000635913.1
ENST00000671722.1
ENST00000672087.1
ENST00000672359.1
CDS GCA 90 bp CAAGCCTCCCTCGTATTTCCCAACAGAGCTGGTCTCTGGTGGCCTTaGTTCTTCTCCGGGTCTGGAAGGGGCCCGTCTCCCTGGCCCCTG +
Preference number: 5 (lower is better)
Translates to: QASLVFPNRAGLWWP*FFSGSGRGPSPWPL
Trigger: CAGGGGCCAGGGAGACGGGCCCCTTCCAGACCCGGAGAAGAAGCAAGGCCACCAGAGACCAGCTCTGTTGGGAAATACGAGGGAGGCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558659.5
ENST00000673091.1
CDS GCA 90 bp GCCTTCTCTTGGTGCCGCACAGTCTCCTCCAGCGCCTTCATCTTCTaGAGCTTGCCCTGGTACTGCTTCAGCAGAGCGGCCTGTGGCTGC +
Preference number: 5 (lower is better)
Translates to: AFSWCRTVSSSAFIF*SLPWYCFSRAACGC
Trigger: GCAGCCACAGGCCGCTCTGCTGAAGCAGTACCAGGGCAAGCTGCAGAAGATGAAGGCGCTGGAGGAGACTGTGCGGCACCAAGAGAAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560565.1
ENST00000673367.1
CDS-3UTR CAA 90 bp GGGAGCCTAGGACTCCTGACCCCCAGCCCTGGAGTTGGCTCCACAATGGCTTTTTTCAGAGGAGGGGGCTaGCTCCTGTCCTGCAGCCTG +
Preference number: 5 (lower is better)
Translates to: GSLGLLTPSPGVGSTMAFFRGGG*LLSCSL
Trigger: CAGGCTGCAGGACAGGAGCAAGCCCCCTCCTCTGAA...AAAAGCCATTGTGGAGCCAACTCCAGGGCTGGGGGTCAGGAGTCCTAGGCTCCC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CAA 90 bp TTCTGGCCACGGGCAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTGTCAGGGTCTTTGCTTaGCGGGGCTGGGCGGTCCCG +
Preference number: 5 (lower is better)
Translates to: FWPRAKHSWLKSRRSQGLVRVFA*RGWAVP
Trigger: CGGGACCGCCCAGCCCCGCAAAGCAAAGACCCTGAC...AAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTGCCCGTGGCCAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CAA 90 bp GGGAGCCTAGGACTCCTGACCCCCAGCCCTGGAGTTGGCTCCACAATGGCTTTTGAGAAGTCAGGGTCTTaGCTTTGCGGGGCTGGGCGG +
Preference number: 5 (lower is better)
Translates to: GSLGLLTPSPGVGSTMAFEKSGS*LCGAGR
Trigger: CCGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCTC...AAAAGCCATTGTGGAGCCAACTCCAGGGCTGGGGGTCAGGAGTCCTAGGCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CAA 90 bp GCTTCTGGCCACGGGCAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCGAGAAGTCAGGGTCTTaGCTTTGCGGGGCTGGGCGG +
Preference number: 5 (lower is better)
Translates to: ASGHGQSTAGSRAGEVRVEKSGS*LCGAGR
Trigger: CCGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCTC...GACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTGCCCGTGGCCAGAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS TCA 90 bp GCCCGTCCCAAGGGTTCGTCCAGCCTCAGTGCCTCCACATGCAGCTaGGCATCATGCTGCCCGTCATTCTTGCAGAAACCTGCAGGGGGT +
Preference number: 5 (lower is better)
Translates to: ARPKGSSSLSASTCS*ASCCPSFLQKPAGG
Trigger: ACCCCCTGCAGGTTTCTGCAAGAATGACGGGCAGCATGATGCTCAGCTGCATGTGGAGGCACTGAGGCTGGACGAACCCTTGGGACGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559243.1
ENST00000672087.1
CDS GCA 90 bp GCTGGGCCAGGCGGCTCCTCAGTATGCGGTTCTCTCCTTCCAGGATaGTGGCCTGTCTCCGCAGAGACAGGATGTCCTCTGCCATCTTCT +
Preference number: 5 (lower is better)
Translates to: AGPGGSSVCGSLLPG*WPVSAETGCPLPSS
Trigger: AGAAGATGGCAGAGGACATCCTGTCTCTGCGGAGACAGGCCAGCATCCTGGAAGGAGAGAACCGCATACTGAGGAGCCGCCTGGCCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000398814.8
ENST00000558659.5
ENST00000558821.5
ENST00000560565.1
ENST00000672175.1
ENST00000672263.1
ENST00000673091.1
ENST00000673214.1
ENST00000673367.1
ENST00000673517.1
CDS GCA 90 bp ACCTTCTCTTGGTGCCGCACAGTCTCCTCCAGCGCCTTCATCTTCTaGAGCTTGCCCTGGTACTGCTTCAGCAGAGCGGCCTGTGGCTGC +
Preference number: 5 (lower is better)
Translates to: TFSWCRTVSSSAFIF*SLPWYCFSRAACGC
Trigger: GCAGCCACAGGCCGCTCTGCTGAAGCAGTACCAGGGCAAGCTGCAGAAGATGAAGGCGCTGGAGGAGACTGTGCGGCACCAAGAGAAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000398814.8
ENST00000558659.5
ENST00000558821.5
ENST00000672175.1
ENST00000672263.1
ENST00000673091.1
ENST00000673214.1
ENST00000673517.1
CDS GCA 90 bp TCCTGTGCGGGCAGGGTCTCTGTGCACTCTGAGTGGCCTGGGCCATaGGTCTCTTGTAGCCTCTCTGTCAAGTCTCCTCCTGCTCCCAAC +
Preference number: 5 (lower is better)
Translates to: SCAGRVSVHSEWPGP*VSCSLSVKSPPAPN
Trigger: GTTGGGAGCAGGAGGAGACTTGACAGAGAGGCTACAAGAGACGCATGGCCCAGGCCACTCAGAGTGCACAGAGACCCTGCCCGCACAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000558659.5
ENST00000560565.1
ENST00000673091.1
ENST00000673214.1
ENST00000673367.1
CDS CCA 90 bp GGTCTGTGGGTGGAAGGGCCTTGGGGGTTGAGGGCCATGGCCAGCTaGACAGGGTCAGCAATGAGGCAATTGACTCTTGGCACACCTAGG +
Preference number: 5 (lower is better)
Translates to: GLWVEGPWGLRAMAS*TGSAMRQLTLGTPR
Trigger: CCTAGGTGTGCCAAGAGTCAATTGCCTCATTGCTGACCCTGTCCAGCTGGCCATGGCCCTCAACCCCCAAGGCCCTTCCACCCACAGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398814.8
ENST00000672175.1
CDS CCA 90 bp GCGAGGCACGTCAAAGTTCATCATGGACGGGATAGGGAAGGACAGTaGGGTGATGGGCAGCCCCACAGAGGCCAGGTCCCTGTTAGCCTG +
Preference number: 5 (lower is better)
Translates to: ARHVKVHHGRDREGQ*GDGQPHRGQVPVSL
Trigger: CAGGCTAACAGGGACCTGGCCTCTGTGGGGCTGCCCATCACCCCACTGTCCTTCCCTATCCCGTCCATGATGAACTTTGACGTGCCTCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398814.8
ENST00000558659.5
ENST00000672175.1
ENST00000673091.1
CDS-3UTR CAA 90 bp GGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGGCGGTCCCGCCTGAAACCTTTTTCTaGCTCCTGCAGCCGTGTGGC +
Preference number: 5 (lower is better)
Translates to: GSRAGEVRVFALRGWAVPPETFF*LLQPCG
Trigger: GCCACACGGCTGCAGGAGCAAGAAAAAGGTTTCAGG...CGGGACCGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CAA 90 bp ACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGGCGCCCCCAGCCCTGGAGTaGGCTCCACAATGGCTTTTC +
Preference number: 5 (lower is better)
Translates to: TAGSRAGEVRVFALRGWAPPALE*APQWLF
Trigger: GAAAAGCCATTGTGGAGCCAACTCCAGGGCTGGGGG...CGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CAA 90 bp TTGGTAATGGAGCAGGAATGGGAGCCTAGGACTCCTGACCCCCAGCCCTGGAGTTGGGCGGTCCCGGGGTaGAACTTGAGGGGCAGTTGT +
Preference number: 5 (lower is better)
Translates to: LVMEQEWEPRTPDPQPWSWAVPG*NLRGSC
Trigger: ACAACTGCCCCTCAAGTTCAACCCCGGGACCGCCCA...ACTCCAGGGCTGGGGGTCAGGAGTCCTAGGCTCCCATTCCTGCTCCATTACCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS TCA 90 bp GGGACAGGATCCGGCTCTGAGCGTGTTCCAGCTTGGCCAGGAGGTTaGACTTGTCTGAAGTACCAGAGAGGAGATCCTGTGCGGGCAGGG +
Preference number: 5 (lower is better)
Translates to: GTGSGSERVPAWPGG*TCLKYQRGDPVRAG
Trigger: CCCTGCCCGCACAGGATCTCCTCTCTGGTACTTCAGACAAGTTCAACCTCCTGGCCAAGCTGGAACACGCTCAGAGCCGGATCCTGTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000558659.5
ENST00000560565.1
ENST00000673091.1
ENST00000673214.1
ENST00000673367.1
CDS TCA 90 bp CCATGGAGGGTGACCATGATGGTCTCCTTCTTAGAGGGAGACAGGTaGCCGATCTCAGGTTCCGTGCTCTGGGAGGCGATCAGGGGCTCC +
Preference number: 5 (lower is better)
Translates to: PWRVTMMVSFLEGDR*PISGSVLWEAIRGS
Trigger: GGAGCCCCTGATCGCCTCCCAGAGCACGGAACCTGAGATCGGTCACCTGTCTCCCTCTAAGAAGGAGACCATCATGGTCACCCTCCATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398814.8
ENST00000635913.1
ENST00000671722.1
ENST00000672175.1
CDS GCA 90 bp CACAGTAGCGGTACAGGTCCTCGTGATCCTGAGCCTTTGGGTTCATaGGGGGTTGGTCTGGCCTCGGGTAGATGGGGAAGATGGCCTCAC +
Preference number: 5 (lower is better)
Translates to: HSSGTGPRDPEPLGS*GVGLASGRWGRWPH
Trigger: GTGAGGCCATCTTCCCCATCTACCCGAGGCCAGACCAACCCCGCATGAACCCAAAGGCTCAGGATCACGAGGACCTGTACCGCTACTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000559243.1
ENST00000560148.5
ENST00000635913.1
ENST00000671722.1
ENST00000672087.1
ENST00000672359.1
CDS GCA 90 bp CACGCCAGTGCCATTGGATGGCACTCCGTTCCTCTCTTGGCCTCCTaGTCCGGGCTCCAGCACCAAGCACTTTGTCTTCATGTGCCCAGT +
Preference number: 5 (lower is better)
Translates to: HASAIGWHSVPLLAS*SGLQHQALCLHVPS
Trigger: ACTGGGCACATGAAGACAAAGTGCTTGGTGCTGGAGCCCGGAGCAGGAGGCCAAGAGAGGAACGGAGTGCCATCCAATGGCACTGGCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561332.1
ENST00000672882.1
CDS CCA 90 bp CCAGAGAGGAGATCCTGTGCGGGCAGGGTCTCTGTGCACTCTGAGTaGCCTGGGCCATGCGTCTCTTGTAGCCTCTCTGTCAAGTCTCCT +
Preference number: 5 (lower is better)
Translates to: PERRSCAGRVSVHSE*PGPCVSCSLSVKSP
Trigger: AGGAGACTTGACAGAGAGGCTACAAGAGACGCATGGCCCAGGCCACTCAGAGTGCACAGAGACCCTGCCCGCACAGGATCTCCTCTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000558659.5
ENST00000560565.1
ENST00000673091.1
ENST00000673214.1
ENST00000673367.1
CDS CCA 90 bp AAAGGACAAGCCTCCCTCGTATTTCCCAACAGAGCTGGTCTCTGGTaGCCTTGCTTCTTCTCCGGGTCTGGAAGGGGCCCGTCTCCCTGG +
Preference number: 5 (lower is better)
Translates to: KGQASLVFPNRAGLW*PCFFSGSGRGPSPW
Trigger: CCAGGGAGACGGGCCCCTTCCAGACCCGGAGAAGAAGCAAGGCCACCAGAGACCAGCTCTGTTGGGAAATACGAGGGAGGCTTGTCCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558659.5
ENST00000673091.1
CDS-3UTR CAA 90 bp TTCCCAGGGGGTGACCTGCTCAAGGGCATATTGCCTGACAAACCAGGCCTCAGATTCAGAGGAGGGGGCTaGCTCCTGTCCTGCAGCCTG +
Preference number: 5 (lower is better)
Translates to: FPGGDLLKGILPDKPGLRFRGGG*LLSCSL
Trigger: CAGGCTGCAGGACAGGAGCAAGCCCCCTCCTCTGAA...TCTGAGGCCTGGTTTGTCAGGCAATATGCCCTTGAGCAGGTCACCCCCTGGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CAA 90 bp CCGGGGTTGAACTTGAGGGGCAGTTGTGAGCAGGCCTGTTTGTTCTCGGGAAGTTTCAGAGGAGGGGGCTaGCTCCTGTCCTGCAGCCTG +
Preference number: 5 (lower is better)
Translates to: PGLNLRGSCEQACLFSGSFRGGG*LLSCSL
Trigger: CAGGCTGCAGGACAGGAGCAAGCCCCCTCCTCTGAA...ACTTCCCGAGAACAAACAGGCCTGCTCACAACTGCCCCTCAAGTTCAACCCCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CAA 90 bp TGGAGCAGGAATGGGAGCCTAGGACTCCTGACCCCCAGCCCTGGAGTTGGCTCCGCCAGGAGGTTGAACTaGTCTGAAGTACCAGAGAGG +
Preference number: 5 (lower is better)
Translates to: WSRNGSLGLLTPSPGVGSARRLN*SEVPER
Trigger: CCTCTCTGGTACTTCAGACAAGTTCAACCTCCTGGC...GGAGCCAACTCCAGGGCTGGGGGTCAGGAGTCCTAGGCTCCCATTCCTGCTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CAA 90 bp TGGAGCAGGAATGGGAGCCTAGGACTCCTGACCCCCAGCCCTGGAGTTGGCTCCTGTGAGCAGGCCTGTTaGTTCTCGGGAAGTTGGCAA +
Preference number: 5 (lower is better)
Translates to: WSRNGSLGLLTPSPGVGSCEQAC*FSGSWQ
Trigger: TTGCCAACTTCCCGAGAACAAACAGGCCTGCTCACA...GGAGCCAACTCCAGGGCTGGGGGTCAGGAGTCCTAGGCTCCCATTCCTGCTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CAA 90 bp CCGGGGTTGAACTTGAGGGGCAGTTGTGAGCAGGCCTGTTTGTTCTCGGGAAGTTGGGCGGTCCCGGGGTaGAACTTGAGGGGCAGTTGT +
Preference number: 5 (lower is better)
Translates to: PGLNLRGSCEQACLFSGSWAVPG*NLRGSC
Trigger: ACAACTGCCCCTCAAGTTCAACCCCGGGACCGCCCA...ACTTCCCGAGAACAAACAGGCCTGCTCACAACTGCCCCTCAAGTTCAACCCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CAA 90 bp CGGGCAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGTGGGCGGTCCCGGGGTaGAACTTGAGGGGCAGTTGT +
Preference number: 5 (lower is better)
Translates to: RAKHSWLKSRRSQGLCFAWAVPG*NLRGSC
Trigger: ACAACTGCCCCTCAAGTTCAACCCCGGGACCGCCCA...CGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTGCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CAA 90 bp CCGGGGTTGAACTTGAGGGGCAGTTGTGAGCAGGCCTGTTTGTTCTCGGGAAGTGAGAAGTCAGGGTCTTaGCTTTGCGGGGCTGGGCGG +
Preference number: 5 (lower is better)
Translates to: PGLNLRGSCEQACLFSGSEKSGS*LCGAGR
Trigger: CCGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCTC...ACTTCCCGAGAACAAACAGGCCTGCTCACAACTGCCCCTCAAGTTCAACCCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CAA 90 bp GGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGGCGGTCCCGGTGCAAAGGTTGCCTTaGTTCCTTGCCTGTTCCCTC +
Preference number: 5 (lower is better)
Translates to: GSRAGEVRVFALRGWAVPVQRLP*FLACSL
Trigger: GAGGGAACAGGCAAGGAACAAAGGCAACCTTTGCAC...CGGGACCGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CAA 90 bp TGGAGCAGGAATGGGAGCCTAGGACTCCTGACCCCCAGCCCTGGAGTTGGCTCCTTTGTTCTCGGGAAGTaGGCAAAGTGGAGCCAGTCC +
Preference number: 5 (lower is better)
Translates to: WSRNGSLGLLTPSPGVGSFVLGK*AKWSQS
Trigger: GGACTGGCTCCACTTTGCCAACTTCCCGAGAACAAA...GGAGCCAACTCCAGGGCTGGGGGTCAGGAGTCCTAGGCTCCCATTCCTGCTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321374.9
ENST00000673517.1
CDS TCA 90 bp GGGACAGGATCCGGCTCTGAGCGTGTTCCAGCTTGGCCAGGAGGTTaGACTTGTCTGAAGTACCAGAGAGGAGATCCGGCAGGGCCTGTT +
Preference number: 5 (lower is better)
Translates to: GTGSGSERVPAWPGG*TCLKYQRGDPAGPV
Trigger: AACAGGCCCTGCCGGATCTCCTCTCTGGTACTTCAGACAAGTTCAACCTCCTGGCCAAGCTGGAACACGCTCAGAGCCGGATCCTGTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321374.9
ENST00000398814.8
ENST00000558821.5
ENST00000672175.1
ENST00000672263.1
ENST00000673517.1
CDS CCA 90 bp CAGGTTGCCACAGTAGCGGTACAGGTCCTCGTGATCCTGAGCCTTTaGGTTCATGCGGGGTTGGTCTGGCCTCGGGTAGATGGGGAAGAT +
Preference number: 5 (lower is better)
Translates to: QVATVAVQVLVILSL*VHAGLVWPRVDGED
Trigger: ATCTTCCCCATCTACCCGAGGCCAGACCAACCCCGCATGAACCCAAAGGCTCAGGATCACGAGGACCTGTACCGCTACTGTGGCAACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000559243.1
ENST00000560148.5
ENST00000635913.1
ENST00000671722.1
ENST00000672087.1
ENST00000672359.1
CDS CCA 90 bp GGGCAGATGAAAAGGACAAGCCTCCCTCGTATTTCCCAACAGAGCTaGTCTCTGGTGGCCTTGCTTCTTCTCCGGGTCTGGAAGGGGCCC +
Preference number: 5 (lower is better)
Translates to: GQMKRTSLPRISQQS*SLVALLLLRVWKGP
Trigger: GGGCCCCTTCCAGACCCGGAGAAGAAGCAAGGCCACCAGAGACCAGCTCTGTTGGGAAATACGAGGGAGGCTTGTCCTTTTCATCTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558659.5
ENST00000673091.1
CDS-3UTR CAA 90 bp CTGGCCACGGGCAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTCGATCACCTTCTCTaGGTGCCGCACAGTCTCCTC +
Preference number: 5 (lower is better)
Translates to: LATGKAQLAQEQEKSGSLLDHLL*VPHSLL
Trigger: GAGGAGACTGTGCGGCACCAAGAGAAGGTGATCGAG...CAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTGCCCGTGGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CAA 90 bp CTGAGAGTTAGCGGTCTCCTTCTGGGGGCTCAAGGGCTTGTTGAGCTTAGAGTCTTCAGAGGAGGGGGCTaGCTCCTGTCCTGCAGCCTG +
Preference number: 5 (lower is better)
Translates to: LRVSGLLLGAQGLVELRVFRGGG*LLSCSL
Trigger: CAGGCTGCAGGACAGGAGCAAGCCCCCTCCTCTGAA...GACTCTAAGCTCAACAAGCCCTTGAGCCCCCAGAAGGAGACCGCTAACTCTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CAA 90 bp TCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGGCGGTCCCGGGGAGCTTGGCCAGGAGGTaGAACTTGTCTGAAGTACCA +
Preference number: 5 (lower is better)
Translates to: SRAGEVRVFALRGWAVPGSLARR*NLSEVP
Trigger: TGGTACTTCAGACAAGTTCAACCTCCTGGCCAAGCT...CCCCGGGACCGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CAA 90 bp ACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGGCGAGACCGAGCCTTCGGTaGGTAATGGAGCAGGAATGG +
Preference number: 5 (lower is better)
Translates to: TAGSRAGEVRVFALRGWARPSLR*VMEQEW
Trigger: CCATTCCTGCTCCATTACCAACCGAAGGCTCGGTCT...CGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CAA 90 bp GGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGGCGGTCCCGGTGAGTGTGCAAAGGTaGCCTTTGTTCCTTGCCTGT +
Preference number: 5 (lower is better)
Translates to: GSRAGEVRVFALRGWAVPVSVQR*PLFLAC
Trigger: ACAGGCAAGGAACAAAGGCAACCTTTGCACACTCAC...CGGGACCGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS TCA 90 bp GCCCGTCCCAAGGGTTCGTCCAGCCTCAGTGCCTCCACATGCAGCTaGGCATCATGCTGCCCGTCATTCTTGCAGAAACCTTTGGGCAAA +
Preference number: 5 (lower is better)
Translates to: ARPKGSSSLSASTCS*ASCCPSFLQKPLGK
Trigger: TTTGCCCAAAGGTTTCTGCAAGAATGACGGGCAGCATGATGCTCAGCTGCATGTGGAGGCACTGAGGCTGGACGAACCCTTGGGACGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635913.1
ENST00000671722.1
CDS GCA 90 bp CTGGTGGCGGTTCTTATCCAGCTCCGTCCGCAGCTTCGCGTTTTCTaGCAGCAGCACCGAGTAAAGTTCAACCGGCAGGTTCTCTCCCAT +
Preference number: 5 (lower is better)
Translates to: LVAVLIQLRPQLRVF*QQHRVKFNRQVLSH
Trigger: ATGGGAGAGAACCTGCCGGTTGAACTTTACTCGGTGCTGCTGGCAGAAAACGCGAAGCTGCGGACGGAGCTGGATAAGAACCGCCACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000398814.8
ENST00000558659.5
ENST00000558821.5
ENST00000560565.1
ENST00000672175.1
ENST00000672263.1
ENST00000673091.1
ENST00000673214.1
ENST00000673367.1
ENST00000673517.1
CDS GCA 90 bp TCCTTCCAGGATGCTGGCCTGTCTCCGCAGAGACAGGATGTCCTCTaGCATCTTCTGCATGGCCCGCCGGTAGTTGTTCATCTCTGTGTC +
Preference number: 5 (lower is better)
Translates to: SFQDAGLSPQRQDVL*HLLHGPPVVVHLCV
Trigger: GACACAGAGATGAACAACTACCGGCGGGCCATGCAGAAGATGGCAGAGGACATCCTGTCTCTGCGGAGACAGGCCAGCATCCTGGAAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398814.8
ENST00000558659.5
ENST00000672175.1
ENST00000673091.1
CDS CCA 90 bp GGGACATCTCAGGCACCAGAGGTTCCTCCTCTGCTTCTCGTGGAGTaGACGTGCTCAAGTCCATTGTGGAGCTCACTGTGTCCTTGGACC +
Preference number: 5 (lower is better)
Translates to: GTSQAPEVPPLLLVE*TCSSPLWSSLCPWT
Trigger: GGTCCAAGGACACAGTGAGCTCCACAATGGACTTGAGCACGTCCACTCCACGAGAAGCAGAGGAGGAACCTCTGGTGCCTGAGATGTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398814.8
ENST00000558659.5
ENST00000563951.1
ENST00000672048.1
ENST00000672175.1
ENST00000673091.1
CDS-3UTR CAA 90 bp CTGGCCACGGGCAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCCTGAAACCTTTTTCTaGCTCCTGCAGCCGTGTGGC +
Preference number: 5 (lower is better)
Translates to: LATGKAQLAQEQEKSGSLPETFF*LLQPCG
Trigger: GCCACACGGCTGCAGGAGCAAGAAAAAGGTTTCAGG...CAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTGCCCGTGGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CAA 90 bp CAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGGCGGTCCACAGTCATCTCCTaGAGTTTCACAGCACCCCAT +
Preference number: 5 (lower is better)
Translates to: QLAQEQEKSGSLLCGAGRSTVIS*SFTAPH
Trigger: ATGGGGTGCTGTGAAACTCAAGGAGATGACTGTGGA...CCGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CAA 90 bp ACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGGCGTGTGAGCAGGCCTGTTaGTTCTCGGGAAGTTGGCAA +
Preference number: 5 (lower is better)
Translates to: TAGSRAGEVRVFALRGWACEQAC*FSGSWQ
Trigger: TTGCCAACTTCCCGAGAACAAACAGGCCTGCTCACA...CGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CAA 90 bp GCATCCTGGAGATGCCTGCATGGACCCCTCATCCACAGTCATCTCCTTGAGTTTTGGGCGGTCCCGGGGTaGAACTTGAGGGGCAGTTGT +
Preference number: 5 (lower is better)
Translates to: ASWRCLHGPLIHSHLLEFWAVPG*NLRGSC
Trigger: ACAACTGCCCCTCAAGTTCAACCCCGGGACCGCCCA...AAACTCAAGGAGATGACTGTGGATGAGGGGTCCATGCAGGCATCTCCAGGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CAA 90 bp CCTCAGAGTATCCAGAATCCAGTGGGCCATGACCTGGCAAAGATTTCTAAACCCGTCAGGGTCTTTGCTTaGCGGGGCTGGGCGGTCCCG +
Preference number: 5 (lower is better)
Translates to: PQSIQNPVGHDLAKISKPVRVFA*RGWAVP
Trigger: CGGGACCGCCCAGCCCCGCAAAGCAAAGACCCTGAC...GGGTTTAGAAATCTTTGCCAGGTCATGGCCCACTGGATTCTGGATACTCTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CAA 90 bp GCATCCTGGAGATGCCTGCATGGACCCCTCATCCACAGTCATCTCCTTGAGTTTGAGAAGTCAGGGTCTTaGCTTTGCGGGGCTGGGCGG +
Preference number: 5 (lower is better)
Translates to: ASWRCLHGPLIHSHLLEFEKSGS*LCGAGR
Trigger: CCGCCCAGCCCCGCAAAGCAAAGACCCTGACTTCTC...AAACTCAAGGAGATGACTGTGGATGAGGGGTCCATGCAGGCATCTCCAGGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CAA 90 bp CTGGCCACGGGCAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTGCTCAAGGGCATATaGCCTGACAAACCAGGCCTC +
Preference number: 5 (lower is better)
Translates to: LATGKAQLAQEQEKSGSLLLKGI*PDKPGL
Trigger: GAGGCCTGGTTTGTCAGGCAATATGCCCTTGAGCAG...CAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTGCCCGTGGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CAA 90 bp GTCTCCTTCTGGGGGCTCAAGGGCTTGTTGAGCTTAGAGTCTGAGCTGGGCAGCTGGGGGCTCAAGGGCTaGTTGAGCTTAGAGTCTGAG +
Preference number: 5 (lower is better)
Translates to: VSFWGLKGLLSLESELGSWGLKG*LSLESE
Trigger: CTCAGACTCTAAGCTCAACAAGCCCTTGAGCCCCCA...GCTGCCCAGCTCAGACTCTAAGCTCAACAAGCCCTTGAGCCCCCAGAAGGAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS TCA 90 bp GCCCCCAGGCAGACTGGAGACCCTGGGAAGCTTAGCTCCTGGTCTTaGTCTTCAACTTGGGTTGTACCATGGGTGATTTCTGGGCACCCA +
Preference number: 5 (lower is better)
Translates to: APRQTGDPGKLSSWS*SSTWVVPWVISGHP
Trigger: TGGGTGCCCAGAAATCACCCATGGTACAACCCAAGTTGAAGATCAAGACCAGGAGCTAAGCTTCCCAGGGTCTCCAGTCTGCCTGGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000560565.1
ENST00000673367.1
CDS TCA 90 bp CCTTCTGGGTGTGGGTATGGGGCAGGACTTTCTGGAATGGAGGTCTaGCCTTTGTCTTCATGTGCCCAGTTGCTTGGCTGCTCCACCAGG +
Preference number: 5 (lower is better)
Translates to: PSGCGYGAGLSGMEV*PLSSCAQLLGCSTR
Trigger: CCTGGTGGAGCAGCCAAGCAACTGGGCACATGAAGACAAAGGTCAGACCTCCATTCCAGAAAGTCCTGCCCCATACCCACACCCAGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558645.5
ENST00000671751.1
CDS TCA 90 bp GCCCGTCCCAAGGGTTCGTCCAGCCTCAGTGCCTCCACATGCAGCTaGGCATCATGCTGCCCGTCATTCTTGCAGAAACCTTTGTCTTCA +
Preference number: 5 (lower is better)
Translates to: ARPKGSSSLSASTCS*ASCCPSFLQKPLSS
Trigger: TGAAGACAAAGGTTTCTGCAAGAATGACGGGCAGCATGATGCTCAGCTGCATGTGGAGGCACTGAGGCTGGACGAACCCTTGGGACGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560148.5
ENST00000672359.1
CDS GCA 90 bp TCCTTCCAGGATGCTGGCCTGTCTCCGCAGAGACAGGATGTCCTCTaGCATCTTCTGCATGGCCCGCCGGTAGTTGTTCATCTCAGAGAA +
Preference number: 5 (lower is better)
Translates to: SFQDAGLSPQRQDVL*HLLHGPPVVVHLRE
Trigger: TTCTCTGAGATGAACAACTACCGGCGGGCCATGCAGAAGATGGCAGAGGACATCCTGTCTCTGCGGAGACAGGCCAGCATCCTGGAAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000560565.1
ENST00000672263.1
ENST00000673214.1
ENST00000673367.1
ENST00000673517.1
CDS GCA 90 bp TGCCTGAAACCTTTTTCTTGCTCCTGCAGCCGTGTGGCCAGATCCTaGTTCTCTCGTCCCCAGCGTCGAGCTGAGTCCTCTAACTGGCTT +
Preference number: 5 (lower is better)
Translates to: CLKPFSCSCSRVARS*FSRPQRRAESSNWL
Trigger: AAGCCAGTTAGAGGACTCAGCTCGACGCTGGGGACGAGAGAAGCAGGATCTGGCCACACGGCTGCAGGAGCAAGAAAAAGGTTTCAGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000398814.8
ENST00000558659.5
ENST00000558821.5
ENST00000672175.1
ENST00000672263.1
ENST00000673091.1
ENST00000673214.1
ENST00000673517.1
CDS GCA 90 bp GCAGCCGATGTAGCGGGGTATGAAGCTGCTCTTCCGAACGACTGTTaGGTACAACTGGGTCTTGGCAGTGGCTTCATCGGCTTTCCCAGA +
Preference number: 5 (lower is better)
Translates to: AADVAGYEAALPNDC*VQLGLGSGFIGFPR
Trigger: TCTGGGAAAGCCGATGAAGCCACTGCCAAGACCCAGTTGTACGCAACAGTCGTTCGGAAGAGCAGCTTCATACCCCGCTACATCGGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398814.8
ENST00000558659.5
ENST00000672175.1
ENST00000673091.1
CDS GCA 90 bp TCTCAGGCACCAGAGGTTCCTCCTCTGCTTCTCGTGGAGTGGACGTaGTCAAGTCCATTGTGGAGCTCACTGTGTCCTTGGACCAGGACT +
Preference number: 5 (lower is better)
Translates to: SQAPEVPPLLLVEWT*SSPLWSSLCPWTRT
Trigger: AGTCCTGGTCCAAGGACACAGTGAGCTCCACAATGGACTTGAGCACGTCCACTCCACGAGAAGCAGAGGAGGAACCTCTGGTGCCTGAGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398814.8
ENST00000558659.5
ENST00000563951.1
ENST00000672048.1
ENST00000672175.1
ENST00000673091.1
CDS CCA 90 bp ATCAGTCCTGCCCAGACAGCTGGCCTGGGCGTCTTGGAGTCCTTATaGGTAGTAGACAGTATGGAGGTCAATGTGGTCTCAGGGGTGCCA +
Preference number: 5 (lower is better)
Translates to: ISPAQTAGLGVLESL*VVDSMEVNVVSGVP
Trigger: TGGCACCCCTGAGACCACATTGACCTCCATACTGTCTACTACCCATAAGGACTCCAAGACGCCCAGGCCAGCTGTCTGGGCAGGACTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398814.8
ENST00000672175.1
CDS CCA 90 bp TGGTACAAACGGCTCTTTAGCGGCAACACAGAGATGCCCAGGGGCTaGTTGAGGGTCCACGGCTGGCTGCCTTTCATTGAAGTTGAGGAG +
Preference number: 5 (lower is better)
Translates to: WYKRLFSGNTEMPRG*LRVHGWLPFIEVEE
Trigger: CTCCTCAACTTCAATGAAAGGCAGCCAGCCGTGGACCCTCAACCAGCCCCTGGGCATCTCTGTGTTGCCGCTAAAGAGCCGTTTGTACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398814.8
ENST00000558659.5
ENST00000672175.1
ENST00000673091.1
CDS CCA 90 bp TTTAGTTCCCGAGTCTCCAGGACTAGGGAATGCTGTGACCAGCATTaGCAGGGCCATTTAAGGCTGTGTAACCCAGGGGCCGTGGCTGAG +
Preference number: 5 (lower is better)
Translates to: FSSRVSRTRECCDQH*QGHLRLCNPGAVAE
Trigger: CTCAGCCACGGCCCCTGGGTTACACAGCCTTAAATGGCCCTGCCAATGCTGGTCACAGCATTCCCTAGTCCTGGAGACTCGGGAACTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560148.5
ENST00000672359.1
CDS-3UTR CAA 90 bp CTGGCCACGGGCAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGTTCATCTTCTGCAGCTaGCCCTGGTACTGCTTCAGC +
Preference number: 5 (lower is better)
Translates to: LATGKAQLAQEQEKSGSLFIFCS*PWYCFS
Trigger: GCTGAAGCAGTACCAGGGCAAGCTGCAGAAGATGAA...CAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTGCCCGTGGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CAA 90 bp TCGGGAAGTTGGCAAAGTGGAGCCAGTCCTAAAGCACAGTGTCAGGGCATCCTGCTCGATCACCTTCTCTaGGTGCCGCACAGTCTCCTC +
Preference number: 5 (lower is better)
Translates to: SGSWQSGASPKAQCQGILLDHLL*VPHSLL
Trigger: GAGGAGACTGTGCGGCACCAAGAGAAGGTGATCGAG...CAGGATGCCCTGACACTGTGCTTTAGGACTGGCTCCACTTTGCCAACTTCCCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321374.9
ENST00000673517.1
CDS-3UTR CAA 90 bp CTGCTGAGAGTTAGCGGTCTCCTTCTGGGGGCTCAAGGGCTTGTTGAGCTTAGACTCGATCACCTTCTCTaGGTGCCGCACAGTCTCCTC +
Preference number: 5 (lower is better)
Translates to: LLRVSGLLLGAQGLVELRLDHLL*VPHSLL
Trigger: GAGGAGACTGTGCGGCACCAAGAGAAGGTGATCGAG...TCTAAGCTCAACAAGCCCTTGAGCCCCCAGAAGGAGACCGCTAACTCTCAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CAA 90 bp AAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGCCTGAAACCTTTTTCTaGCTCCTGCAGCCGTGTGGC +
Preference number: 5 (lower is better)
Translates to: KHSWLKSRRSQGLCFAGLPETFF*LLQPCG
Trigger: GCCACACGGCTGCAGGAGCAAGAAAAAGGTTTCAGG...CAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CAA 90 bp GCATCCTGGAGATGCCTGCATGGACCCCTCATCCACAGTCATCTCCTTGAGTTTCCCCCAGCCCTGGAGTaGGCTCCACAATGGCTTTTC +
Preference number: 5 (lower is better)
Translates to: ASWRCLHGPLIHSHLLEFPPALE*APQWLF
Trigger: GAAAAGCCATTGTGGAGCCAACTCCAGGGCTGGGGG...AAACTCAAGGAGATGACTGTGGATGAGGGGTCCATGCAGGCATCTCCAGGATGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CAA 90 bp CAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCAGACCGAGCCTTCGGTaGGTAATGGAGCAGGAATGG +
Preference number: 5 (lower is better)
Translates to: QSTAGSRAGEVRVFALRGRPSLR*VMEQEW
Trigger: CCATTCCTGCTCCATTACCAACCGAAGGCTCGGTCT...GCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CAA 90 bp TTCTGGCCACGGGCAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTAGACCGAGCCTTCGGTaGGTAATGGAGCAGGAATGG +
Preference number: 5 (lower is better)
Translates to: FWPRAKHSWLKSRRSQGLRPSLR*VMEQEW
Trigger: CCATTCCTGCTCCATTACCAACCGAAGGCTCGGTCT...AAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTGCCCGTGGCCAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CAA 90 bp TTGGTAATGGAGCAGGAATGGGAGCCTAGGACTCCTGACCCCCAGCCCTGGAGTGTGCAAAGGTTGCCTTaGTTCCTTGCCTGTTCCCTC +
Preference number: 5 (lower is better)
Translates to: LVMEQEWEPRTPDPQPWSVQRLP*FLACSL
Trigger: GAGGGAACAGGCAAGGAACAAAGGCAACCTTTGCAC...ACTCCAGGGCTGGGGGTCAGGAGTCCTAGGCTCCCATTCCTGCTCCATTACCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CAA 90 bp AGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGGTGCAAAGGTTGCCTTaGTTCCTTGCCTGTTCCCTC +
Preference number: 5 (lower is better)
Translates to: STAGSRAGEVRVFALRGWVQRLP*FLACSL
Trigger: GAGGGAACAGGCAAGGAACAAAGGCAACCTTTGCAC...CCAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CAA 90 bp AAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGCTGCTCAAGGGCATATaGCCTGACAAACCAGGCCTC +
Preference number: 5 (lower is better)
Translates to: KHSWLKSRRSQGLCFAGLLLKGI*PDKPGL
Trigger: GAGGCCTGGTTTGTCAGGCAATATGCCCTTGAGCAG...CAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CAA 90 bp TTCCCAGGGGGTGACCTGCTCAAGGGCATATTGCCTGACAAACCAGGCCTCAGAGGGCTCAAGGGCTTGTaGAGCTTAGAGTCTGAGCTG +
Preference number: 5 (lower is better)
Translates to: FPGGDLLKGILPDKPGLRGLKGL*SLESEL
Trigger: CAGCTCAGACTCTAAGCTCAACAAGCCCTTGAGCCC...TCTGAGGCCTGGTTTGTCAGGCAATATGCCCTTGAGCAGGTCACCCCCTGGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CAA 90 bp TCAGGGCATCCTGGAGATGCCTGCATGGACCCCTCATCCACAGTCATCTCCTTGGGGCTCAAGGGCTTGTaGAGCTTAGAGTCTGAGCTG +
Preference number: 5 (lower is better)
Translates to: SGHPGDACMDPSSTVISLGLKGL*SLESEL
Trigger: CAGCTCAGACTCTAAGCTCAACAAGCCCTTGAGCCC...CAAGGAGATGACTGTGGATGAGGGGTCCATGCAGGCATCTCCAGGATGCCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CAA 90 bp CCGGGGTTGAACTTGAGGGGCAGTTGTGAGCAGGCCTGTTTGTTCTCGGGAAGTGGGCTCAAGGGCTTGTaGAGCTTAGAGTCTGAGCTG +
Preference number: 5 (lower is better)
Translates to: PGLNLRGSCEQACLFSGSGLKGL*SLESEL
Trigger: CAGCTCAGACTCTAAGCTCAACAAGCCCTTGAGCCC...ACTTCCCGAGAACAAACAGGCCTGCTCACAACTGCCCCTCAAGTTCAACCCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CAA 90 bp TTCCCAGGGGGTGACCTGCTCAAGGGCATATTGCCTGACAAACCAGGCCTCAGATGGGGGCTCAAGGGCTaGTTGAGCTTAGAGTCTGAG +
Preference number: 5 (lower is better)
Translates to: FPGGDLLKGILPDKPGLRWGLKG*LSLESE
Trigger: CTCAGACTCTAAGCTCAACAAGCCCTTGAGCCCCCA...TCTGAGGCCTGGTTTGTCAGGCAATATGCCCTTGAGCAGGTCACCCCCTGGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CAA 90 bp AAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGTGGGGGCTCAAGGGCTaGTTGAGCTTAGAGTCTGAG +
Preference number: 5 (lower is better)
Translates to: KHSWLKSRRSQGLCFAGLWGLKG*LSLESE
Trigger: CTCAGACTCTAAGCTCAACAAGCCCTTGAGCCCCCA...CAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS TCA 90 bp TTGCCCTGGTACTGCTTCAGCAGAGCGGCCTGTGGCTGCTGGGCCTaGTACAGAAGGAGCAGCTCCTTCTCTCGATCATTCTTTCGAATC +
Preference number: 5 (lower is better)
Translates to: LPWYCFSRAACGCWA*YRRSSSFSRSFFRI
Trigger: GATTCGAAAGAATGATCGAGAGAAGGAGCTGCTCCTTCTGTATCAGGCCCAGCAGCCACAGGCCGCTCTGCTGAAGCAGTACCAGGGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000398814.8
ENST00000558659.5
ENST00000558821.5
ENST00000560565.1
ENST00000672175.1
ENST00000672263.1
ENST00000673091.1
ENST00000673214.1
ENST00000673367.1
ENST00000673517.1
CDS TCA 90 bp CGAGCTGAGTCCTCTAACTGGCTTTCCAGGGACAGGATCCGGCTCTaGGCGTGTTCCAGCTTGGCCAGGAGGTTGAACTTGTCTGAAGTA +
Preference number: 5 (lower is better)
Translates to: RAESSNWLSRDRIRL*ACSSLARRLNLSEV
Trigger: TACTTCAGACAAGTTCAACCTCCTGGCCAAGCTGGAACACGCTCAGAGCCGGATCCTGTCCCTGGAAAGCCAGTTAGAGGACTCAGCTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000398814.8
ENST00000558659.5
ENST00000558821.5
ENST00000560565.1
ENST00000672175.1
ENST00000672263.1
ENST00000673091.1
ENST00000673214.1
ENST00000673367.1
ENST00000673517.1
CDS TCA 90 bp ACAAACGGCTCTTTAGCGGCAACACAGAGATGCCCAGGGGCTGGTTaGGGGTCCACGGCTGGCTGCCTTTCATTGAAGTTGAGGAGTAGT +
Preference number: 5 (lower is better)
Translates to: TNGSLAATQRCPGAG*GSTAGCLSLKLRSS
Trigger: ACTACTCCTCAACTTCAATGAAAGGCAGCCAGCCGTGGACCCTCAACCAGCCCCTGGGCATCTCTGTGTTGCCGCTAAAGAGCCGTTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398814.8
ENST00000558659.5
ENST00000672175.1
ENST00000673091.1
CDS GCA 90 bp CATCTCTGTGTCATGGGACATCTCAGGCACCAGAGGTTCCTCCTCTaGTTCTCGTGGAGTGGACGTGCTCAAGTCCATTGTGGAGCTCAC +
Preference number: 5 (lower is better)
Translates to: HLCVMGHLRHQRFLL*FSWSGRAQVHCGAH
Trigger: GTGAGCTCCACAATGGACTTGAGCACGTCCACTCCACGAGAAGCAGAGGAGGAACCTCTGGTGCCTGAGATGTCCCATGACACAGAGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398814.8
ENST00000558659.5
ENST00000672175.1
ENST00000673091.1
CDS GCA 90 bp TCGGATTGTGTCATGGGACATCTCAGGCACCAGAGGTTCCTCCTCTaGTTCTCGTGGAGTGGACGTGCTCAAGTCCATTGTGGAGCTCAC +
Preference number: 5 (lower is better)
Translates to: SDCVMGHLRHQRFLL*FSWSGRAQVHCGAH
Trigger: GTGAGCTCCACAATGGACTTGAGCACGTCCACTCCACGAGAAGCAGAGGAGGAACCTCTGGTGCCTGAGATGTCCCATGACACAATCCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563951.1
ENST00000672048.1
CDS CCA 90 bp AGCTGCTCTTCCGAACGACTGTTGCGTACAACTGGGTCTTGGCAGTaGCTTCATCGGCTTTCCCAGACTCAGTGGGCTTCACCAGCTCAA +
Preference number: 5 (lower is better)
Translates to: SCSSERLLRTTGSWQ*LHRLSQTQWASPAQ
Trigger: TTGAGCTGGTGAAGCCCACTGAGTCTGGGAAAGCCGATGAAGCCACTGCCAAGACCCAGTTGTACGCAACAGTCGTTCGGAAGAGCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398814.8
ENST00000558659.5
ENST00000672175.1
ENST00000673091.1
CDS CCA 90 bp GTCATGGGACATCTCAGGCACCAGAGGTTCCTCCTCTGCTTCTCGTaGAGTGGACGTGCTCAAGTCCATTGTGGAGCTCACTGTGTCCTT +
Preference number: 5 (lower is better)
Translates to: VMGHLRHQRFLLCFS*SGRAQVHCGAHCVL
Trigger: AAGGACACAGTGAGCTCCACAATGGACTTGAGCACGTCCACTCCACGAGAAGCAGAGGAGGAACCTCTGGTGCCTGAGATGTCCCATGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398814.8
ENST00000558659.5
ENST00000563951.1
ENST00000672048.1
ENST00000672175.1
ENST00000673091.1
CDS-3UTR CAA 90 bp TCAGGGCATCCTGGAGATGCCTGCATGGACCCCTCATCCACAGTCATCTCCTTGTTCATCTTCTGCAGCTaGCCCTGGTACTGCTTCAGC +
Preference number: 5 (lower is better)
Translates to: SGHPGDACMDPSSTVISLFIFCS*PWYCFS
Trigger: GCTGAAGCAGTACCAGGGCAAGCTGCAGAAGATGAA...CAAGGAGATGACTGTGGATGAGGGGTCCATGCAGGCATCTCCAGGATGCCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CAA 90 bp CCGGGGTTGAACTTGAGGGGCAGTTGTGAGCAGGCCTGTTTGTTCTCGGGAAGTTTCATCTTCTGCAGCTaGCCCTGGTACTGCTTCAGC +
Preference number: 5 (lower is better)
Translates to: PGLNLRGSCEQACLFSGSFIFCS*PWYCFS
Trigger: GCTGAAGCAGTACCAGGGCAAGCTGCAGAAGATGAA...ACTTCCCGAGAACAAACAGGCCTGCTCACAACTGCCCCTCAAGTTCAACCCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CAA 90 bp CATCCTGGAGATGCCTGCATGGACCCCTCATCCACAGTCATCTCCTTGAGTTTCCTCGATCACCTTCTCTaGGTGCCGCACAGTCTCCTC +
Preference number: 5 (lower is better)
Translates to: HPGDACMDPSSTVISLSFLDHLL*VPHSLL
Trigger: GAGGAGACTGTGCGGCACCAAGAGAAGGTGATCGAG...GAAACTCAAGGAGATGACTGTGGATGAGGGGTCCATGCAGGCATCTCCAGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CAA 90 bp CCTCAGAGTATCCAGAATCCAGTGGGCCATGACCTGGCAAAGATTTCTAAACCCTTCAGAGGAGGGGGCTaGCTCCTGTCCTGCAGCCTG +
Preference number: 5 (lower is better)
Translates to: PQSIQNPVGHDLAKISKPFRGGG*LLSCSL
Trigger: CAGGCTGCAGGACAGGAGCAAGCCCCCTCCTCTGAA...GGGTTTAGAAATCTTTGCCAGGTCATGGCCCACTGGATTCTGGATACTCTGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CAA 90 bp CAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCGCCAGGAGGTTGAACTaGTCTGAAGTACCAGAGAGG +
Preference number: 5 (lower is better)
Translates to: QSTAGSRAGEVRVFALRGARRLN*SEVPER
Trigger: CCTCTCTGGTACTTCAGACAAGTTCAACCTCCTGGC...GCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CAA 90 bp AAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGCCAGGAGGTTGAACTaGTCTGAAGTACCAGAGAGG +
Preference number: 5 (lower is better)
Translates to: KHSWLKSRRSQGLCFAGLARRLN*SEVPER
Trigger: CCTCTCTGGTACTTCAGACAAGTTCAACCTCCTGGC...CAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CAA 90 bp GTGTCAGGGCATCCTGGAGATGCCTGCATGGACCCCTCATCCACAGTCATCTCCAGCTTGGCCAGGAGGTaGAACTTGTCTGAAGTACCA +
Preference number: 5 (lower is better)
Translates to: VSGHPGDACMDPSSTVISSLARR*NLSEVP
Trigger: TGGTACTTCAGACAAGTTCAACCTCCTGGCCAAGCT...GGAGATGACTGTGGATGAGGGGTCCATGCAGGCATCTCCAGGATGCCCTGACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CAA 90 bp CTGCTGAGAGTTAGCGGTCTCCTTCTGGGGGCTCAAGGGCTTGTTGAGCTTAGACCTGAAACCTTTTTCTaGCTCCTGCAGCCGTGTGGC +
Preference number: 5 (lower is better)
Translates to: LLRVSGLLLGAQGLVELRPETFF*LLQPCG
Trigger: GCCACACGGCTGCAGGAGCAAGAAAAAGGTTTCAGG...TCTAAGCTCAACAAGCCCTTGAGCCCCCAGAAGGAGACCGCTAACTCTCAGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CAA 90 bp CTGCTGAGAGTTAGCGGTCTCCTTCTGGGGGCTCAAGGGCTTGTTGAGCTTAGAAGACCGAGCCTTCGGTaGGTAATGGAGCAGGAATGG +
Preference number: 5 (lower is better)
Translates to: LLRVSGLLLGAQGLVELRRPSLR*VMEQEW
Trigger: CCATTCCTGCTCCATTACCAACCGAAGGCTCGGTCT...TCTAAGCTCAACAAGCCCTTGAGCCCCCAGAAGGAGACCGCTAACTCTCAGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CAA 90 bp CTGGCCACGGGCAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGTCCACAGTCATCTCCTaGAGTTTCACAGCACCCCAT +
Preference number: 5 (lower is better)
Translates to: LATGKAQLAQEQEKSGSLSTVIS*SFTAPH
Trigger: ATGGGGTGCTGTGAAACTCAAGGAGATGACTGTGGA...CAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTGCCCGTGGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CAA 90 bp GCTTCTGGCCACGGGCAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGTTCTCGGGAAGTaGGCAAAGTGGAGCCTACAT +
Preference number: 5 (lower is better)
Translates to: ASGHGQSTAGSRAGEVRVFVLGK*AKWSLH
Trigger: ATGTAGGCTCCACTTTGCCAACTTCCCGAGAACAAA...GACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTGCCCGTGGCCAGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CAA 90 bp CCGGGGTTGAACTTGAGGGGCAGTTGTGAGCAGGCCTGTTTGTTCTCGGGAAGTTGTGAGCAGGCCTGTTaGTTCTCGGGAAGTTGGCAA +
Preference number: 5 (lower is better)
Translates to: PGLNLRGSCEQACLFSGSCEQAC*FSGSWQ
Trigger: TTGCCAACTTCCCGAGAACAAACAGGCCTGCTCACA...ACTTCCCGAGAACAAACAGGCCTGCTCACAACTGCCCCTCAAGTTCAACCCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CAA 90 bp CGGGCAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGTGTGAGCAGGCCTGTTaGTTCTCGGGAAGTTGGCAA +
Preference number: 5 (lower is better)
Translates to: RAKHSWLKSRRSQGLCFACEQAC*FSGSWQ
Trigger: TTGCCAACTTCCCGAGAACAAACAGGCCTGCTCACA...CGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTGCCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CAA 90 bp TCAGGGCATCCTGGAGATGCCTGCATGGACCCCTCATCCACAGTCATCTCCTTGTGTGAGCAGGCCTGTTaGTTCTCGGGAAGTTGGCAA +
Preference number: 5 (lower is better)
Translates to: SGHPGDACMDPSSTVISLCEQAC*FSGSWQ
Trigger: TTGCCAACTTCCCGAGAACAAACAGGCCTGCTCACA...CAAGGAGATGACTGTGGATGAGGGGTCCATGCAGGCATCTCCAGGATGCCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CAA 90 bp GTCTCCTTCTGGGGGCTCAAGGGCTTGTTGAGCTTAGAGTCTGAGCTGGGCAGCGGTTGCCTTTGTTCCTaGCCTGTTCCCTCATCCTTT +
Preference number: 5 (lower is better)
Translates to: VSFWGLKGLLSLESELGSGCLCS*PVPSSF
Trigger: AAAGGATGAGGGAACAGGCAAGGAACAAAGGCAACC...GCTGCCCAGCTCAGACTCTAAGCTCAACAAGCCCTTGAGCCCCCAGAAGGAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CAA 90 bp CTGCTGAGAGTTAGCGGTCTCCTTCTGGGGGCTCAAGGGCTTGTTGAGCTTAGACTGCTCAAGGGCATATaGCCTGACAAACCAGGCCTC +
Preference number: 5 (lower is better)
Translates to: LLRVSGLLLGAQGLVELRLLKGI*PDKPGL
Trigger: GAGGCCTGGTTTGTCAGGCAATATGCCCTTGAGCAG...TCTAAGCTCAACAAGCCCTTGAGCCCCCAGAAGGAGACCGCTAACTCTCAGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CAA 90 bp CAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTTTGTTCTCGGGAAGTaGGCAAAGTGGAGCCAGTCC +
Preference number: 5 (lower is better)
Translates to: QSTAGSRAGEVRVFALRGFVLGK*AKWSQS
Trigger: GGACTGGCTCCACTTTGCCAACTTCCCGAGAACAAA...GCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321374.9
ENST00000673517.1
CDS TCA 90 bp GAAAGATCTCCAGAGCCATGTGGTTGCAGCCGATGTAGCGGGGTATaGAGCTGCTCTTCCGAACGACTGTTGCGTACAACTGGGTCTTGG +
Preference number: 5 (lower is better)
Translates to: ERSPEPCGCSRCSGV*SCSSERLLRTTGSW
Trigger: CCAAGACCCAGTTGTACGCAACAGTCGTTCGGAAGAGCAGCTTCATACCCCGCTACATCGGCTGCAACCACATGGCTCTGGAGATCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398814.8
ENST00000558659.5
ENST00000672175.1
ENST00000673091.1
CDS GCA 90 bp TTGGGGATGAGTACTTGGTATCAGTGGGTGATCAGGAATCAGTCCTaGCCAGACAGCTGGCCTGGGCGTCTTGGAGTCCTTATGGGTAGT +
Preference number: 5 (lower is better)
Translates to: LGMSTWYQWVIRNQS*PDSWPGRLGVLMGS
Trigger: ACTACCCATAAGGACTCCAAGACGCCCAGGCCAGCTGTCTGGGCAGGACTGATTCCTGATCACCCACTGATACCAAGTACTCATCCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398814.8
ENST00000672175.1
CDS CCA 90 bp GTTCCTCCTCTGCTTCTCGTGGAGTGGACGTGCTCAAGTCCATTGTaGAGCTCACTGTGTCCTTGGACCAGGACTCTTGGATGGTTCTCA +
Preference number: 5 (lower is better)
Translates to: VPPLLLVEWTCSSPL*SSLCPWTRTLGWFS
Trigger: TGAGAACCATCCAAGAGTCCTGGTCCAAGGACACAGTGAGCTCCACAATGGACTTGAGCACGTCCACTCCACGAGAAGCAGAGGAGGAAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398814.8
ENST00000558659.5
ENST00000563951.1
ENST00000672048.1
ENST00000672175.1
ENST00000673091.1
CDS CCA 90 bp AGGATGCAGATCCGGTTATTAAGAGCCGAGCTGGTGGTTCCCCTCTaGCAATTCATCAGGCAGTGGCCCCTCGGTTGTTGCTGTAATGCT +
Preference number: 5 (lower is better)
Translates to: RMQIRLLRAELVVPL*QFIRQWPLGCCCNA
Trigger: AGCATTACAGCAACAACCGAGGGGCCACTGCCTGATGAATTGCCAGAGGGGAACCACCAGCTCGGCTCTTAATAACCGGATCTGCATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000558645.5
ENST00000560148.5
ENST00000561332.1
ENST00000671751.1
ENST00000672359.1
ENST00000672882.1
CDS-3UTR CAA 90 bp CTGCTGAGAGTTAGCGGTCTCCTTCTGGGGGCTCAAGGGCTTGTTGAGCTTAGATTCATCTTCTGCAGCTaGCCCTGGTACTGCTTCAGC +
Preference number: 5 (lower is better)
Translates to: LLRVSGLLLGAQGLVELRFIFCS*PWYCFS
Trigger: GCTGAAGCAGTACCAGGGCAAGCTGCAGAAGATGAA...TCTAAGCTCAACAAGCCCTTGAGCCCCCAGAAGGAGACCGCTAACTCTCAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CAA 90 bp TTCCCAGGGGGTGACCTGCTCAAGGGCATATTGCCTGACAAACCAGGCCTCAGAAGCTTGGCCAGGAGGTaGAACTTGTCTGAAGTACCA +
Preference number: 5 (lower is better)
Translates to: FPGGDLLKGILPDKPGLRSLARR*NLSEVP
Trigger: TGGTACTTCAGACAAGTTCAACCTCCTGGCCAAGCT...TCTGAGGCCTGGTTTGTCAGGCAATATGCCCTTGAGCAGGTCACCCCCTGGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CAA 90 bp CCTCAGAGTATCCAGAATCCAGTGGGCCATGACCTGGCAAAGATTTCTAAACCCCCCCCAGCCCTGGAGTaGGCTCCACAATGGCTTTTC +
Preference number: 5 (lower is better)
Translates to: PQSIQNPVGHDLAKISKPPPALE*APQWLF
Trigger: GAAAAGCCATTGTGGAGCCAACTCCAGGGCTGGGGG...GGGTTTAGAAATCTTTGCCAGGTCATGGCCCACTGGATTCTGGATACTCTGAGG
54% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CAA 90 bp CGGGCAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGTCCACAGTCATCTCCTaGAGTTTCACAGCACCCCAT +
Preference number: 5 (lower is better)
Translates to: RAKHSWLKSRRSQGLCFASTVIS*SFTAPH
Trigger: ATGGGGTGCTGTGAAACTCAAGGAGATGACTGTGGA...CGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTGCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CAA 90 bp CATTCCCAGGGGGTGACCTGCTCAAGGGCATATTGCCTGACAAACCAGGCCTCAGGTTGCCTTTGTTCCTaGCCTGTTCCCTCATCCTTT +
Preference number: 5 (lower is better)
Translates to: HSQGVTCSRAYCLTNQASGCLCS*PVPSSF
Trigger: AAAGGATGAGGGAACAGGCAAGGAACAAAGGCAACC...TGAGGCCTGGTTTGTCAGGCAATATGCCCTTGAGCAGGTCACCCCCTGGGAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CAA 90 bp AAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGGGGCTGGGTTGCCTTTGTTCCTaGCCTGTTCCCTCATCCTTT +
Preference number: 5 (lower is better)
Translates to: KHSWLKSRRSQGLCFAGLGCLCS*PVPSSF
Trigger: AAAGGATGAGGGAACAGGCAAGGAACAAAGGCAACC...CAGCCCCGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CAA 90 bp CCGGGGTTGAACTTGAGGGGCAGTTGTGAGCAGGCCTGTTTGTTCTCGGGAAGTGTGAGTGTGCAAAGGTaGCCTTTGTTCCTTGCCTGT +
Preference number: 5 (lower is better)
Translates to: PGLNLRGSCEQACLFSGSVSVQR*PLFLAC
Trigger: ACAGGCAAGGAACAAAGGCAACCTTTGCACACTCAC...ACTTCCCGAGAACAAACAGGCCTGCTCACAACTGCCCCTCAAGTTCAACCCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CAA 90 bp CATTCCCAGGGGGTGACCTGCTCAAGGGCATATTGCCTGACAAACCAGGCCTCAGTGAGTGTGCAAAGGTaGCCTTTGTTCCTTGCCTGT +
Preference number: 5 (lower is better)
Translates to: HSQGVTCSRAYCLTNQASVSVQR*PLFLAC
Trigger: ACAGGCAAGGAACAAAGGCAACCTTTGCACACTCAC...TGAGGCCTGGTTTGTCAGGCAATATGCCCTTGAGCAGGTCACCCCCTGGGAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CAA 90 bp GCTTCTGGCCACGGGCAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCATTTCTAAACCCATTTaGCCACAGCAGGTGACACCT +
Preference number: 5 (lower is better)
Translates to: ASGHGQSTAGSRAGEVRVISKPI*PQQVTP
Trigger: AGGTGTCACCTGCTGTGGCAAAATGGGTTTAGAAAT...GACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTGCCCGTGGCCAGAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CAA 90 bp CATCCTGGAGATGCCTGCATGGACCCCTCATCCACAGTCATCTCCTTGAGTTTCCTGCTCAAGGGCATATaGCCTGACAAACCAGGCCTC +
Preference number: 5 (lower is better)
Translates to: HPGDACMDPSSTVISLSFLLKGI*PDKPGL
Trigger: GAGGCCTGGTTTGTCAGGCAATATGCCCTTGAGCAG...GAAACTCAAGGAGATGACTGTGGATGAGGGGTCCATGCAGGCATCTCCAGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CAA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCGTGGGTGGAAGGGCCTaGGGGGTTGAGGGCCATGGC +
Preference number: 5 (lower is better)
Translates to: TELQHLITSFLGGGDETPVGGRA*GVEGHG
Trigger: GCCATGGCCCTCAACCCCCAAGGCCCTTCCACCCAC...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000398814.8
ENST00000672175.1
CDS GCA 90 bp GCTACTTTGAAGCTTTCTGCCATGAGTAGTAACTGTGATCCTGTCTaGCACGCCAGTGCCATTGGATGGCACTCCGTTCCTCTCTTGGCC +
Preference number: 5 (lower is better)
Translates to: ATLKLSAMSSNCDPV*HASAIGWHSVPLLA
Trigger: GGCCAAGAGAGGAACGGAGTGCCATCCAATGGCACTGGCGTGGCAGACAGGATCACAGTTACTACTCATGGCAGAAAGCTTCAAAGTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561332.1
ENST00000672882.1
CDS CCA 90 bp ACTTGGTATCAGTGGGTGATCAGGAATCAGTCCTGCCCAGACAGCTaGCCTGGGCGTCTTGGAGTCCTTATGGGTAGTAGACAGTATGGA +
Preference number: 5 (lower is better)
Translates to: TWYQWVIRNQSCPDS*PGRLGVLMGSRQYG
Trigger: TCCATACTGTCTACTACCCATAAGGACTCCAAGACGCCCAGGCCAGCTGTCTGGGCAGGACTGATTCCTGATCACCCACTGATACCAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398814.8
ENST00000672175.1
CDS CCA 90 bp GTCTGGCCTTGTTTAACAATCTTGGGGATGAGTACTTGGTATCAGTaGGTGATCAGGAATCAGTCCTGCCCAGACAGCTGGCCTGGGCGT +
Preference number: 5 (lower is better)
Translates to: VWPCLTILGMSTWYQ*VIRNQSCPDSWPGR
Trigger: ACGCCCAGGCCAGCTGTCTGGGCAGGACTGATTCCTGATCACCCACTGATACCAAGTACTCATCCCCAAGATTGTTAAACAAGGCCAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398814.8
ENST00000672175.1
CDS-3UTR CAA 90 bp CCTCAGAGTATCCAGAATCCAGTGGGCCATGACCTGGCAAAGATTTCTAAACCCCTCGATCACCTTCTCTaGGTGCCGCACAGTCTCCTC +
Preference number: 5 (lower is better)
Translates to: PQSIQNPVGHDLAKISKPLDHLL*VPHSLL
Trigger: GAGGAGACTGTGCGGCACCAAGAGAAGGTGATCGAG...GGGTTTAGAAATCTTTGCCAGGTCATGGCCCACTGGATTCTGGATACTCTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CAA 90 bp AACTTGAGGGGCAGTTGTGAGCAGGCCTGTTTGTTCTCGGGAAGTTGGCAAAGTCCTGAAACCTTTTTCTaGCTCCTGCAGCCGTGTGGC +
Preference number: 5 (lower is better)
Translates to: NLRGSCEQACLFSGSWQSPETFF*LLQPCG
Trigger: GCCACACGGCTGCAGGAGCAAGAAAAAGGTTTCAGG...ACTTTGCCAACTTCCCGAGAACAAACAGGCCTGCTCACAACTGCCCCTCAAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CAA 90 bp GCTTCTGGCCACGGGCAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCGAAGGGTGTGCTAATTaGAGAATCTTAGGCTCTATG +
Preference number: 5 (lower is better)
Translates to: ASGHGQSTAGSRAGEVRVEGCAN*RILGSM
Trigger: CATAGAGCCTAAGATTCTCAAATTAGCACACCCTTC...GACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTGCCCGTGGCCAGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CAA 90 bp CGGGCAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGCTTTGCGTTTGTTCTCGGGAAGTaGGCAAAGTGGAGCCTACAT +
Preference number: 5 (lower is better)
Translates to: RAKHSWLKSRRSQGLCFAFVLGK*AKWSLH
Trigger: ATGTAGGCTCCACTTTGCCAACTTCCCGAGAACAAA...CGCAAAGCAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTGCCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CAA 90 bp CTGGCCACGGGCAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTTGATTTCTAAACCCATTTaGCCACAGCAGGTGACACCT +
Preference number: 5 (lower is better)
Translates to: LATGKAQLAQEQEKSGSLISKPI*PQQVTP
Trigger: AGGTGTCACCTGCTGTGGCAAAATGGGTTTAGAAAT...CAAAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTGCCCGTGGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS CCA 90 bp GCCAGGAGTGTCTGGCCTTGTTTAACAATCTTGGGGATGAGTACTTaGTATCAGTGGGTGATCAGGAATCAGTCCTGCCCAGACAGCTGG +
Preference number: 5 (lower is better)
Translates to: ARSVWPCLTILGMST*YQWVIRNQSCPDSW
Trigger: CCAGCTGTCTGGGCAGGACTGATTCCTGATCACCCACTGATACCAAGTACTCATCCCCAAGATTGTTAAACAAGGCCAGACACTCCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398814.8
ENST00000672175.1
CDS CCA 90 bp GTGGAGTGGACGTGCTCAAGTCCATTGTGGAGCTCACTGTGTCCTTaGACCAGGACTCTTGGATGGTTCTCAGCTTCTTATCCAGGATCT +
Preference number: 5 (lower is better)
Translates to: VEWTCSSPLWSSLCP*TRTLGWFSASYPGS
Trigger: AGATCCTGGATAAGAAGCTGAGAACCATCCAAGAGTCCTGGTCCAAGGACACAGTGAGCTCCACAATGGACTTGAGCACGTCCACTCCAC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398814.8
ENST00000558659.5
ENST00000672175.1
ENST00000673091.1
CDS CCA 90 bp CATTTCTTCCTTCTGGGTGTGGGTATGGGGCAGGACTTTCTGGAATaGAGGTCTGACCTTTGTCTTCATGTGCCCAGTTGCTTGGCTGCT +
Preference number: 5 (lower is better)
Translates to: HFFLLGVGMGQDFLE*RSDLCLHVPSCLAA
Trigger: AGCAGCCAAGCAACTGGGCACATGAAGACAAAGGTCAGACCTCCATTCCAGAAAGTCCTGCCCCATACCCACACCCAGAAGGAAGAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558645.5
ENST00000671751.1
CDS CCA 90 bp GCATGCATTTCTTCCTTCTGGGTGTGGGTATGGGGCAGGACTTTCTaGAATGGAGGTCTGACCTTTGTCTTCATGTGCCCAGTTGCTTGG +
Preference number: 5 (lower is better)
Translates to: ACISSFWVWVWGRTF*NGGLTFVFMCPVAW
Trigger: CCAAGCAACTGGGCACATGAAGACAAAGGTCAGACCTCCATTCCAGAAAGTCCTGCCCCATACCCACACCCAGAAGGAAGAAATGCATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558645.5
ENST00000671751.1
CDS-3UTR CAA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCTTCAGAGGAGGGGGCTaGCTCCTGTCCTGCAGCCTG +
Preference number: 5 (lower is better)
Translates to: TELQHLITSFLGGGDETPFRGGG*LLSCSL
Trigger: CAGGCTGCAGGACAGGAGCAAGCCCCCTCCTCTGAA...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000398814.8
ENST00000672175.1
ENST00000673214.1
CDS-3UTR CAA 90 bp AACTTGAGGGGCAGTTGTGAGCAGGCCTGTTTGTTCTCGGGAAGTTGGCAAAGTGCCAGGAGGTTGAACTaGTCTGAAGTACCAGAGAGG +
Preference number: 5 (lower is better)
Translates to: NLRGSCEQACLFSGSWQSARRLN*SEVPER
Trigger: CCTCTCTGGTACTTCAGACAAGTTCAACCTCCTGGC...ACTTTGCCAACTTCCCGAGAACAAACAGGCCTGCTCACAACTGCCCCTCAAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CAA 90 bp CATCCTGGAGATGCCTGCATGGACCCCTCATCCACAGTCATCTCCTTGAGTTTCAGCTTGGCCAGGAGGTaGAACTTGTCTGAAGTACCA +
Preference number: 5 (lower is better)
Translates to: HPGDACMDPSSTVISLSFSLARR*NLSEVP
Trigger: TGGTACTTCAGACAAGTTCAACCTCCTGGCCAAGCT...GAAACTCAAGGAGATGACTGTGGATGAGGGGTCCATGCAGGCATCTCCAGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CAA 90 bp TCCACAGTCATCTCCTTGAGTTTCACAGCACCCCATGGGGGAAAGGGTAGTTTTCCTGAAACCTTTTTCTaGCTCCTGCAGCCGTGTGGC +
Preference number: 5 (lower is better)
Translates to: STVISLSFTAPHGGKGSFPETFF*LLQPCG
Trigger: GCCACACGGCTGCAGGAGCAAGAAAAAGGTTTCAGG...AAAACTACCCTTTCCCCCATGGGGTGCTGTGAAACTCAAGGAGATGACTGTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CAA 90 bp TCCACAGTCATCTCCTTGAGTTTCACAGCACCCCATGGGGGAAAGGGTAGTTTTAGACCGAGCCTTCGGTaGGTAATGGAGCAGGAATGG +
Preference number: 5 (lower is better)
Translates to: STVISLSFTAPHGGKGSFRPSLR*VMEQEW
Trigger: CCATTCCTGCTCCATTACCAACCGAAGGCTCGGTCT...AAAACTACCCTTTCCCCCATGGGGTGCTGTGAAACTCAAGGAGATGACTGTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CAA 90 bp GCATCCTGGAGATGCCTGCATGGACCCCTCATCCACAGTCATCTCCTTGAGTTTTCCACAGTCATCTCCTaGAGTTTCACAGCACCCCAT +
Preference number: 5 (lower is better)
Translates to: ASWRCLHGPLIHSHLLEFSTVIS*SFTAPH
Trigger: ATGGGGTGCTGTGAAACTCAAGGAGATGACTGTGGA...AAACTCAAGGAGATGACTGTGGATGAGGGGTCCATGCAGGCATCTCCAGGATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
ENST00000673517.1
CDS-3UTR CAA 90 bp CATCCTGGAGATGCCTGCATGGACCCCTCATCCACAGTCATCTCCTTGAGTTTCGGTTGCCTTTGTTCCTaGCCTGTTCCCTCATCCTTT +
Preference number: 5 (lower is better)
Translates to: HPGDACMDPSSTVISLSFGCLCS*PVPSSF
Trigger: AAAGGATGAGGGAACAGGCAAGGAACAAAGGCAACC...GAAACTCAAGGAGATGACTGTGGATGAGGGGTCCATGCAGGCATCTCCAGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CAA 90 bp AACTTGAGGGGCAGTTGTGAGCAGGCCTGTTTGTTCTCGGGAAGTTGGCAAAGTGTGCAAAGGTTGCCTTaGTTCCTTGCCTGTTCCCTC +
Preference number: 5 (lower is better)
Translates to: NLRGSCEQACLFSGSWQSVQRLP*FLACSL
Trigger: GAGGGAACAGGCAAGGAACAAAGGCAACCTTTGCAC...ACTTTGCCAACTTCCCGAGAACAAACAGGCCTGCTCACAACTGCCCCTCAAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CAA 90 bp TCAGGGCATCCTGGAGATGCCTGCATGGACCCCTCATCCACAGTCATCTCCTTGATTTCTAAACCCATTTaGCCACAGCAGGTGACACCT +
Preference number: 5 (lower is better)
Translates to: SGHPGDACMDPSSTVISLISKPI*PQQVTP
Trigger: AGGTGTCACCTGCTGTGGCAAAATGGGTTTAGAAAT...CAAGGAGATGACTGTGGATGAGGGGTCCATGCAGGCATCTCCAGGATGCCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CAA 90 bp TCCACAGTCATCTCCTTGAGTTTCACAGCACCCCATGGGGGAAAGGGTAGTTTTGGGCTCAAGGGCTTGTaGAGCTTAGAGTCTGAGCTG +
Preference number: 5 (lower is better)
Translates to: STVISLSFTAPHGGKGSFGLKGL*SLESEL
Trigger: CAGCTCAGACTCTAAGCTCAACAAGCCCTTGAGCCC...AAAACTACCCTTTCCCCCATGGGGTGCTGTGAAACTCAAGGAGATGACTGTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CAA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCTTGCAGGCAGGCAGGTaGGTAGCCCCATGGAGGGTG +
Preference number: 5 (lower is better)
Translates to: TELQHLITSFLGGGDETPLQAGR*VAPWRV
Trigger: CACCCTCCATGGGGCTACCAACCTGCCTGCCTGCAA...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000398814.8
ENST00000672175.1
CDS-3UTR CAA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCGGCTCGGAGCCATCCTaGCAGGCAGGCAGGTTGGTA +
Preference number: 5 (lower is better)
Translates to: TELQHLITSFLGGGDETPGSEPS*QAGRLV
Trigger: TACCAACCTGCCTGCCTGCAAGGATGGCTCCGAGCC...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000398814.8
ENST00000672175.1
CDS-3UTR CAA 90 bp TTCTGGCCACGGGCAAAGCACAGCTGGCTCAAGAGCAGGAGAAGTCAGGGTCTTGAAGGGTGTGCTAATTaGAGAATCTTAGGCTCTATG +
Preference number: 5 (lower is better)
Translates to: FWPRAKHSWLKSRRSQGLEGCAN*RILGSM
Trigger: CATAGAGCCTAAGATTCTCAAATTAGCACACCCTTC...AAGACCCTGACTTCTCCTGCTCTTGAGCCAGCTGTGCTTTGCCCGTGGCCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CAA 90 bp GCATCCTGGAGATGCCTGCATGGACCCCTCATCCACAGTCATCTCCTTGAGTTTTTTGTTCTCGGGAAGTaGGCAAAGTGGAGCCTACAT +
Preference number: 5 (lower is better)
Translates to: ASWRCLHGPLIHSHLLEFFVLGK*AKWSLH
Trigger: ATGTAGGCTCCACTTTGCCAACTTCCCGAGAACAAA...AAACTCAAGGAGATGACTGTGGATGAGGGGTCCATGCAGGCATCTCCAGGATGC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CAA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCTTGGCCAGGGGCTCGTaGACTCCCCGGAGAAAGATC +
Preference number: 5 (lower is better)
Translates to: TELQHLITSFLGGGDETPLARGS*TPRRKI
Trigger: GATCTTTCTCCGGGGAGTCAACGAGCCCCTGGCCAA...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000398814.8
ENST00000672175.1
CDS GCA 90 bp AGGGGAATTGATTGTTTTAGTTCCCGAGTCTCCAGGACTAGGGAATaGTGTGACCAGCATTGGCAGGGCCATTTAAGGCTGTGTAACCCA +
Preference number: 5 (lower is better)
Translates to: RGIDCFSSRVSRTRE*CDQHWQGHLRLCNP
Trigger: TGGGTTACACAGCCTTAAATGGCCCTGCCAATGCTGGTCACAGCATTCCCTAGTCCTGGAGACTCGGGAACTAAAACAATCAATTCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560148.5
ENST00000672359.1
CDS-3UTR CAA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCCTCGATCACCTTCTCTaGGTGCCGCACAGTCTCCTC +
Preference number: 5 (lower is better)
Translates to: TELQHLITSFLGGGDETPLDHLL*VPHSLL
Trigger: GAGGAGACTGTGCGGCACCAAGAGAAGGTGATCGAG...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000398814.8
ENST00000672175.1
ENST00000673214.1
CDS-3UTR CAA 90 bp CCTCAGAGTATCCAGAATCCAGTGGGCCATGACCTGGCAAAGATTTCTAAACCCAGCTTGGCCAGGAGGTaGAACTTGTCTGAAGTACCA +
Preference number: 5 (lower is better)
Translates to: PQSIQNPVGHDLAKISKPSLARR*NLSEVP
Trigger: TGGTACTTCAGACAAGTTCAACCTCCTGGCCAAGCT...GGGTTTAGAAATCTTTGCCAGGTCATGGCCCACTGGATTCTGGATACTCTGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CAA 90 bp CTGCTGAGAGTTAGCGGTCTCCTTCTGGGGGCTCAAGGGCTTGTTGAGCTTAGAGAAGGGTGTGCTAATTaGAGAATCTTAGGCTCTATG +
Preference number: 5 (lower is better)
Translates to: LLRVSGLLLGAQGLVELREGCAN*RILGSM
Trigger: CATAGAGCCTAAGATTCTCAAATTAGCACACCCTTC...TCTAAGCTCAACAAGCCCTTGAGCCCCCAGAAGGAGACCGCTAACTCTCAGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CAA 90 bp TCCACAGTCATCTCCTTGAGTTTCACAGCACCCCATGGGGGAAAGGGTAGTTTTGTGAGTGTGCAAAGGTaGCCTTTGTTCCTTGCCTGT +
Preference number: 5 (lower is better)
Translates to: STVISLSFTAPHGGKGSFVSVQR*PLFLAC
Trigger: ACAGGCAAGGAACAAAGGCAACCTTTGCACACTCAC...AAAACTACCCTTTCCCCCATGGGGTGCTGTGAAACTCAAGGAGATGACTGTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CAA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCGCGTACAACTGGGTCTaGGCAGTGGCTTCATCGGCT +
Preference number: 5 (lower is better)
Translates to: TELQHLITSFLGGGDETPAYNWV*AVASSA
Trigger: AGCCGATGAAGCCACTGCCAAGACCCAGTTGTACGC...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000398814.8
ENST00000672175.1
CDS CCA 90 bp ATCCAGGATCTTGGGGTCCAAGGTAGGAAGAGCCTTGCTGTTGTTTaGTGTCAAGAAGTTTTCTGGTCTCTCAGAGGAAAGCAGCTGGAA +
Preference number: 5 (lower is better)
Translates to: IQDLGVQGRKSLAVV*CQEVFWSLRGKQLE
Trigger: TTCCAGCTGCTTTCCTCTGAGAGACCAGAAAACTTCTTGACACCAAACAACAGCAAGGCTCTTCCTACCTTGGACCCCAAGATCCTGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398814.8
ENST00000558659.5
ENST00000672175.1
ENST00000673091.1
CDS-3UTR CAA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCCCTGAAACCTTTTTCTaGCTCCTGCAGCCGTGTGGC +
Preference number: 5 (lower is better)
Translates to: TELQHLITSFLGGGDETPPETFF*LLQPCG
Trigger: GCCACACGGCTGCAGGAGCAAGAAAAAGGTTTCAGG...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000398814.8
ENST00000672175.1
ENST00000673214.1
CDS-3UTR CAA 90 bp TCCACAGTCATCTCCTTGAGTTTCACAGCACCCCATGGGGGAAAGGGTAGTTTTTTTGTTCTCGGGAAGTaGGCAAAGTGGAGCCTACAT +
Preference number: 5 (lower is better)
Translates to: STVISLSFTAPHGGKGSFFVLGK*AKWSLH
Trigger: ATGTAGGCTCCACTTTGCCAACTTCCCGAGAACAAA...AAAACTACCCTTTCCCCCATGGGGTGCTGTGAAACTCAAGGAGATGACTGTGGA
49% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CAA 90 bp TTTGTTCTCGGGAAGTTGGCAAAGTGGAGCCTACATCGTGGCCATCTGAGAAGGATTTCTAAACCCATTTaGCCACAGCAGGTGACACCT +
Preference number: 5 (lower is better)
Translates to: FVLGKLAKWSLHRGHLRRISKPI*PQQVTP
Trigger: AGGTGTCACCTGCTGTGGCAAAATGGGTTTAGAAAT...CCTTCTCAGATGGCCACGATGTAGGCTCCACTTTGCCAACTTCCCGAGAACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CAA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCGGGCTCAAGGGCTTGTaGAGCTTAGAGTCTGAGCTG +
Preference number: 5 (lower is better)
Translates to: TELQHLITSFLGGGDETPGLKGL*SLESEL
Trigger: CAGCTCAGACTCTAAGCTCAACAAGCCCTTGAGCCC...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000398814.8
ENST00000672175.1
ENST00000673214.1
CDS-3UTR CAA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCTGGGGGCTCAAGGGCTaGTTGAGCTTAGAGTCTGAG +
Preference number: 5 (lower is better)
Translates to: TELQHLITSFLGGGDETPWGLKG*LSLESE
Trigger: CTCAGACTCTAAGCTCAACAAGCCCTTGAGCCCCCA...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000398814.8
ENST00000672175.1
ENST00000673214.1
CDS-3UTR CAA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCCCCTGCATCCTCAGCTaGGATCTCCACATTCACCGT +
Preference number: 5 (lower is better)
Translates to: TELQHLITSFLGGGDETPPCILS*DLHIHR
Trigger: ACGGTGAATGTGGAGATCCAAGCTGAGGATGCAGGG...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000398814.8
ENST00000672175.1
CDS-3UTR CAA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCGAGCTCACTGTGTCCTaGGACCAGGACTCTTGGATG +
Preference number: 5 (lower is better)
Translates to: TELQHLITSFLGGGDETPELTVS*DQDSWM
Trigger: CATCCAAGAGTCCTGGTCCAAGGACACAGTGAGCTC...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000398814.8
ENST00000672175.1
CDS-3UTR CAA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCTTCATCTTCTGCAGCTaGCCCTGGTACTGCTTCAGC +
Preference number: 5 (lower is better)
Translates to: TELQHLITSFLGGGDETPFIFCS*PWYCFS
Trigger: GCTGAAGCAGTACCAGGGCAAGCTGCAGAAGATGAA...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000398814.8
ENST00000672175.1
ENST00000673214.1
CDS-3UTR CAA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCGCCAGGAGGTTGAACTaGTCTGAAGTACCAGAGAGG +
Preference number: 5 (lower is better)
Translates to: TELQHLITSFLGGGDETPARRLN*SEVPER
Trigger: CCTCTCTGGTACTTCAGACAAGTTCAACCTCCTGGC...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000398814.8
ENST00000672175.1
ENST00000673214.1
CDS-3UTR CAA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCGAGGATCACATCTTCTaGCCCTGCATCCTCAGCTTG +
Preference number: 5 (lower is better)
Translates to: TELQHLITSFLGGGDETPEDHIF*PCILSL
Trigger: CAAGCTGAGGATGCAGGGCAAGAAGATGTGATCCTC...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000398814.8
ENST00000672175.1
CDS-3UTR CAA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCTCTTCCGAACGACTGTaGCGTACAACTGGGTCTTGG +
Preference number: 5 (lower is better)
Translates to: TELQHLITSFLGGGDETPSSERL*RTTGSW
Trigger: CCAAGACCCAGTTGTACGCAACAGTCGTTCGGAAGA...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000398814.8
ENST00000672175.1
CDS-3UTR CAA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCAGCTCCATCTCGGCCTaGGAAGAGGAAGGACTGATT +
Preference number: 5 (lower is better)
Translates to: TELQHLITSFLGGGDETPSSISA*EEEGLI
Trigger: AATCAGTCCTTCCTCTTCCAAGGCCGAGATGGAGCT...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000398814.8
ENST00000672175.1
CDS-3UTR CAA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCGTGGGGGCCTCATCATaGATAGTTTTCAGGCTGGTG +
Preference number: 5 (lower is better)
Translates to: TELQHLITSFLGGGDETPVGASS*IVFRLV
Trigger: CACCAGCCTGAAAACTATCAATGATGAGGCCCCCAC...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000398814.8
ENST00000672175.1
CDS-3UTR CAA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCAGCTTGGCCAGGAGGTaGAACTTGTCTGAAGTACCA +
Preference number: 5 (lower is better)
Translates to: TELQHLITSFLGGGDETPSLARR*NLSEVP
Trigger: TGGTACTTCAGACAAGTTCAACCTCCTGGCCAAGCT...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000398814.8
ENST00000672175.1
ENST00000673214.1
CDS-3UTR CAA 90 bp CCTCAGAGTATCCAGAATCCAGTGGGCCATGACCTGGCAAAGATTTCTAAACCCGAAGGGTGTGCTAATTaGAGAATCTTAGGCTCTATG +
Preference number: 5 (lower is better)
Translates to: PQSIQNPVGHDLAKISKPEGCAN*RILGSM
Trigger: CATAGAGCCTAAGATTCTCAAATTAGCACACCCTTC...GGGTTTAGAAATCTTTGCCAGGTCATGGCCCACTGGATTCTGGATACTCTGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268082.4
ENST00000558821.5
ENST00000672263.1
ENST00000673214.1
CDS-3UTR CAA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCTCAGCAATGAGGCAATaGACTCTTGGCACACCTAGG +
Preference number: 5 (lower is better)
Translates to: TELQHLITSFLGGGDETPSAMRQ*TLGTPR
Trigger: CCTAGGTGTGCCAAGAGTCAATTGCCTCATTGCTGA...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000398814.8
ENST00000672175.1
CDS-3UTR CAA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCCTTGGGGATGAGTACTaGGTATCAGTGGGTGATCAG +
Preference number: 5 (lower is better)
Translates to: TELQHLITSFLGGGDETPLGDEY*VSVGDQ
Trigger: CTGATCACCCACTGATACCAAGTACTCATCCCCAAG...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000398814.8
ENST00000672175.1
CDS-3UTR CAA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCCTGTTGTCCACCACCTaGAGGATCACATCTTCTTGC +
Preference number: 5 (lower is better)
Translates to: TELQHLITSFLGGGDETPLLSTT*RITSSC
Trigger: GCAAGAAGATGTGATCCTCAAGGTGGTGGACAACAG...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000398814.8
ENST00000672175.1
CDS-3UTR CAA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCCTTGGACCAGGACTCTaGGATGGTTCTCAGCTTCTT +
Preference number: 5 (lower is better)
Translates to: TELQHLITSFLGGGDETPLGPGL*DGSQLL
Trigger: AAGAAGCTGAGAACCATCCAAGAGTCCTGGTCCAAG...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000398814.8
ENST00000672175.1
CDS-3UTR CAA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCCAGGAGTGTCTGGCCTaGTTTAACAATCTTGGGGAT +
Preference number: 5 (lower is better)
Translates to: TELQHLITSFLGGGDETPQECLA*FNNLGD
Trigger: ATCCCCAAGATTGTTAAACAAGGCCAGACACTCCTG...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000398814.8
ENST00000672175.1
CDS-3UTR CAA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCTCCTGTTTCTTTCTGTaGTCCACCACCTTGAGGATC +
Preference number: 5 (lower is better)
Translates to: TELQHLITSFLGGGDETPSCFFL*STTLRI
Trigger: GATCCTCAAGGTGGTGGACAACAGAAAGAAACAGGA...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000398814.8
ENST00000672175.1
CDS-3UTR CAA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCGCTGGCTGCCTTTCATaGAAGTTGAGGAGTAGTACT +
Preference number: 5 (lower is better)
Translates to: TELQHLITSFLGGGDETPAGCLS*KLRSST
Trigger: AGTACTACTCCTCAACTTCAATGAAAGGCAGCCAGC...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000398814.8
ENST00000672175.1
CDS-3UTR CAA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCAAGGTAGGAAGAGCCTaGCTGTTGTTTGGTGTCAAG +
Preference number: 5 (lower is better)
Translates to: TELQHLITSFLGGGDETPKVGRA*LLFGVK
Trigger: CTTGACACCAAACAACAGCAAGGCTCTTCCTACCTT...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000398814.8
ENST00000672175.1
CDS-3UTR CAA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCTTCTTATCCAGGATCTaGGGGTCCAAGGTAGGAAGA +
Preference number: 5 (lower is better)
Translates to: TELQHLITSFLGGGDETPFLSRI*GSKVGR
Trigger: TCTTCCTACCTTGGACCCCAAGATCCTGGATAAGAA...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000398814.8
ENST00000672175.1
CDS-3UTR CAA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCTGCCTTTCATTGAAGTaGAGGAGTAGTACTCCAGCA +
Preference number: 5 (lower is better)
Translates to: TELQHLITSFLGGGDETPCLSLK*RSSTPA
Trigger: TGCTGGAGTACTACTCCTCAACTTCAATGAAAGGCA...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000398814.8
ENST00000672175.1
CDS-3UTR CAA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCGAGCCTTGCTGTTGTTaGGTGTCAAGAAGTTTTCTG +
Preference number: 5 (lower is better)
Translates to: TELQHLITSFLGGGDETPEPCCC*VSRSFL
Trigger: CAGAAAACTTCTTGACACCAAACAACAGCAAGGCTC...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000398814.8
ENST00000672175.1
CDS-3UTR CAA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCGGAAGAGCCTTGCTGTaGTTTGGTGTCAAGAAGTTT +
Preference number: 5 (lower is better)
Translates to: TELQHLITSFLGGGDETPGRALL*FGVKKF
Trigger: AAACTTCTTGACACCAAACAACAGCAAGGCTCTTCC...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000398814.8
ENST00000672175.1
CDS-3UTR CAA 90 bp ACAGAGCTACAACATTTAATAACGTCATTTTTAGGGGGCGGTGATGAGACTCCCTCTTCAGTGTTCTTTTaGTTTTTCAGTCCCATCCTC +
Preference number: 5 (lower is better)
Translates to: TELQHLITSFLGGGDETPSSVFF*FFSPIL
Trigger: GAGGATGGGACTGAAAAACAAAAAGAACACTGAAGA...GGGAGTCTCATCACCGCCCCCTAAAAATGACGTTATTAAATGTTGTAGCTCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000398814.8
ENST00000672175.1
CDS CCA 72 bp GTGTGTGAAGTCAGGTGCGGGGGTGGGGGTGGCTCCTaGCCACACCCTTGCAGGGCTCAGGCCGCCAATGGT +
Preference number: 6 (lower is better)
Translates to: VCEVRCGGGGGS*PHPCRAQAANG
Trigger: ACCATTGGCGGCCTGAGCCCTGCAAGGGTGTGGCCAGGAGCCACCCCCACCCCCGCACCTGACTTCACACAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000560148.5
ENST00000672359.1
CDS TCA 72 bp CATCAGTTCTGGCTGGCCAGCCCTGGGAGGGCTGTCTaGGACTGGAGGCTGAGGGCCCCGGTGGACGTGGAA +
Preference number: 6 (lower is better)
Translates to: HQFWLASPGRAV*DWRLRAPVDVE
Trigger: TTCCACGTCCACCGGGGCCCTCAGCCTCCAGTCTCAGACAGCCCTCCCAGGGCTGGCCAGCCAGAACTGATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000560148.5
ENST00000635913.1
ENST00000671722.1
ENST00000672359.1
CDS GCA 72 bp GGCCCAGGTCAAGGGCCTCTTACCGGCAGGGCCTGTTaGTGCAGAATGATGGGGGCCTGCTGGTGGCGGTTC +
Preference number: 6 (lower is better)
Translates to: GPGQGPLTGRAC*CRMMGACWWRF
Trigger: GAACCGCCACCAGCAGGCCCCCATCATTCTGCAGCAACAGGCCCTGCCGGTAAGAGGCCCTTGACCTGGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000560565.1
ENST00000673367.1
CDS CCA 72 bp TTGGGTTCATGCGGGGTTGGTCTGGCCTCGGGTAGATaGGGAAGATGGCCTCACCCACCCGCTGGGCTGCCC +
Preference number: 6 (lower is better)
Translates to: LGSCGVGLASGR*GRWPHPPAGLP
Trigger: GGGCAGCCCAGCGGGTGGGTGAGGCCATCTTCCCCATCTACCCGAGGCCAGACCAACCCCGCATGAACCCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000559243.1
ENST00000560148.5
ENST00000635913.1
ENST00000671722.1
ENST00000672087.1
ENST00000672359.1
CDS CAA 90 bp CTTCTTCTCCGGGTCTGGAAGGGGCCCGTCTCCCTGGCCCCTGCTTaGGAAGGCCTCTTCTCTCCACCCTCCTGGGTCCACTGTGGCCCT +
Preference number: 6 (lower is better)
Translates to: LLLRVWKGPVSLAPA*EGLFSPPSWVHCGP
Trigger: AGGGCCACAGTGGACCCAGGAGGGTGGAGAGAAGAGGCCTTCCAAAGCAGGGGCCAGGGAGACGGGCCCCTTCCAGACCCGGAGAAGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558659.5
ENST00000673091.1
CDS GCA 72 bp AGGGCCCAGGCAGGCAGTGCGGAGCTGGCCGTGGGCTaGCTACCCTTTCATCTCTGCAACTCCTTCCTCCCT +
Preference number: 6 (lower is better)
Translates to: RAQAGSAELAVG*LPFHLCNSFLP
Trigger: AGGGAGGAAGGAGTTGCAGAGATGAAAGGGTAGGCAGCCCACGGCCAGCTCCGCACTGCCTGCCTGGGCCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560148.5
ENST00000672359.1
CDS CAA 72 bp CTCTCAGCAGCGAGATGGTCTGTGGGTGGAAGGGCCTaGGGGGTTGAGGGCCATGGCCAGCTGGACAGGGTC +
Preference number: 6 (lower is better)
Translates to: LSAARWSVGGRA*GVEGHGQLDRV
Trigger: GACCCTGTCCAGCTGGCCATGGCCCTCAACCCCCAAGGCCCTTCCACCCACAGACCATCTCGCTGCTGAGAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398814.8
ENST00000672175.1
CDS TCA 72 bp GACCCAGGGTTCAGGCCCCCTGAATGCCATGGCCACTaGGAGACCAACTGCCAGGCTGAGCACTGCACCCTC +
Preference number: 6 (lower is better)
Translates to: DPGFRPPECHGH*ETNCQAEHCTL
Trigger: GAGGGTGCAGTGCTCAGCCTGGCAGTTGGTCTCTCAGTGGCCATGGCATTCAGGGGGCCTGAACCCTGGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000559243.1
ENST00000635913.1
ENST00000671722.1
ENST00000672087.1
CDS CCA 72 bp AGGGCCTGTTGCTGCAGAATGATGGGGGCCTGCTGGTaGCGGTTCTTATCCAGCTCCGTCCGCAGCTTCGCG +
Preference number: 6 (lower is better)
Translates to: RACCCRMMGACW*RFLSSSVRSFA
Trigger: CGCGAAGCTGCGGACGGAGCTGGATAAGAACCGCCACCAGCAGGCCCCCATCATTCTGCAGCAACAGGCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000398814.8
ENST00000558659.5
ENST00000558821.5
ENST00000560565.1
ENST00000672175.1
ENST00000672263.1
ENST00000673091.1
ENST00000673214.1
ENST00000673367.1
ENST00000673517.1
CDS CCA 72 bp AGCAGGTCCTGGATCTCTCAGCAGCGAGATGGTCTGTaGGTGGAAGGGCCTTGGGGGTTGAGGGCCATGGCC +
Preference number: 6 (lower is better)
Translates to: SRSWISQQRDGL*VEGPWGLRAMA
Trigger: GGCCATGGCCCTCAACCCCCAAGGCCCTTCCACCCACAGACCATCTCGCTGCTGAGAGATCCAGGACCTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398814.8
ENST00000672175.1
CDS CCA 72 bp TGCTTCTTCTCCGGGTCTGGAAGGGGCCCGTCTCCCTaGCCCCTGCTTTGGAAGGCCTCTTCTCTCCACCCT +
Preference number: 6 (lower is better)
Translates to: CFFSGSGRGPSP*PLLWKASSLHP
Trigger: AGGGTGGAGAGAAGAGGCCTTCCAAAGCAGGGGCCAGGGAGACGGGCCCCTTCCAGACCCGGAGAAGAAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558659.5
ENST00000673091.1
CDS CAA 90 bp TCTTGGTGCCGCACAGTCTCCTCCAGCGCCTTCATCTTCTGCAGCTaGCCCTGGTACTGCTTCAGCAGAGCGGCCTGTGGCTGCTGGGCC +
Preference number: 6 (lower is better)
Translates to: SWCRTVSSSAFIFCS*PWYCFSRAACGCWA
Trigger: GGCCCAGCAGCCACAGGCCGCTCTGCTGAAGCAGTACCAGGGCAAGCTGCAGAAGATGAAGGCGCTGGAGGAGACTGTGCGGCACCAAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000398814.8
ENST00000558659.5
ENST00000558821.5
ENST00000560565.1
ENST00000672175.1
ENST00000672263.1
ENST00000673091.1
ENST00000673214.1
ENST00000673367.1
ENST00000673517.1
CDS CAA 90 bp GCGGTACAGGTCCTCGTGATCCTGAGCCTTTGGGTTCATGCGGGGTaGGTCTGGCCTCGGGTAGATGGGGAAGATGGCCTCACCCACCCG +
Preference number: 6 (lower is better)
Translates to: AVQVLVILSLWVHAG*VWPRVDGEDGLTHP
Trigger: CGGGTGGGTGAGGCCATCTTCCCCATCTACCCGAGGCCAGACCAACCCCGCATGAACCCAAAGGCTCAGGATCACGAGGACCTGTACCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000559243.1
ENST00000560148.5
ENST00000635913.1
ENST00000671722.1
ENST00000672087.1
ENST00000672359.1
CDS CAA 90 bp GTCCTGGATCTCTCAGCAGCGAGATGGTCTGTGGGTGGAAGGGCCTaGGGGGTTGAGGGCCATGGCCAGCTGGACAGGGTCAGCAATGAG +
Preference number: 6 (lower is better)
Translates to: VLDLSAARWSVGGRA*GVEGHGQLDRVSNE
Trigger: CTCATTGCTGACCCTGTCCAGCTGGCCATGGCCCTCAACCCCCAAGGCCCTTCCACCCACAGACCATCTCGCTGCTGAGAGATCCAGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398814.8
ENST00000672175.1
CDS CAA 90 bp ACAAGCCTCCCTCGTATTTCCCAACAGAGCTGGTCTCTGGTGGCCTaGCTTCTTCTCCGGGTCTGGAAGGGGCCCGTCTCCCTGGCCCCT +
Preference number: 6 (lower is better)
Translates to: TSLPRISQQSWSLVA*LLLRVWKGPVSLAP
Trigger: AGGGGCCAGGGAGACGGGCCCCTTCCAGACCCGGAGAAGAAGCAAGGCCACCAGAGACCAGCTCTGTTGGGAAATACGAGGGAGGCTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558659.5
ENST00000673091.1
CDS TCA 72 bp TCAGCAGGGATGCAGAGACCCAGGGTTCAGGCCCCCTaGATGCCATGGCCACTGAGAGACCAACTGCCAGGC +
Preference number: 6 (lower is better)
Translates to: SAGMQRPRVQAP*MPWPLRDQLPG
Trigger: GCCTGGCAGTTGGTCTCTCAGTGGCCATGGCATTCAGGGGGCCTGAACCCTGGGTCTCTGCATCCCTGCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000559243.1
ENST00000635913.1
ENST00000671722.1
ENST00000672087.1
CDS GCA 72 bp TGGTGCCGCACAGTCTCCTCCAGCGCCTTCATCTTCTaGAGCTTGCCCTGGTACTGCTTCAGCAGAGCGGCC +
Preference number: 6 (lower is better)
Translates to: WCRTVSSSAFIF*SLPWYCFSRAA
Trigger: GGCCGCTCTGCTGAAGCAGTACCAGGGCAAGCTGCAGAAGATGAAGGCGCTGGAGGAGACTGTGCGGCACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000398814.8
ENST00000558659.5
ENST00000558821.5
ENST00000560565.1
ENST00000672175.1
ENST00000672263.1
ENST00000673091.1
ENST00000673214.1
ENST00000673367.1
ENST00000673517.1
CDS CCA 72 bp GCCTCCCTCGTATTTCCCAACAGAGCTGGTCTCTGGTaGCCTTGCTTCTTCTCCGGGTCTGGAAGGGGCCCG +
Preference number: 6 (lower is better)
Translates to: ASLVFPNRAGLW*PCFFSGSGRGP
Trigger: CGGGCCCCTTCCAGACCCGGAGAAGAAGCAAGGCCACCAGAGACCAGCTCTGTTGGGAAATACGAGGGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558659.5
ENST00000673091.1
CDS CAA 72 bp CACGCCAGTGCCATTGGATGGCACTCCGTTCCTCTCTaGGCCTCCTGCTCCGGGCTCCAGCACCAAGCACTT +
Preference number: 6 (lower is better)
Translates to: HASAIGWHSVPL*ASCSGLQHQAL
Trigger: AAGTGCTTGGTGCTGGAGCCCGGAGCAGGAGGCCAAGAGAGGAACGGAGTGCCATCCAATGGCACTGGCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561332.1
ENST00000672882.1
CDS TCA 72 bp CCCCAGGCTTGGACAGCTGAGGGCATCCGTTCTGGCTaGCGCGAGGCACGTCAAAGTTCATCATGGACGGGA +
Preference number: 6 (lower is better)
Translates to: PQAWTAEGIRSG*REARQSSSWTG
Trigger: TCCCGTCCATGATGAACTTTGACGTGCCTCGCGTCAGCCAGAACGGATGCCCTCAGCTGTCCAAGCCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398814.8
ENST00000558659.5
ENST00000672175.1
ENST00000673091.1
CDS GCA 72 bp GGCGGCTCCTCAGTATGCGGTTCTCTCCTTCCAGGATaGTGGCCTGTCTCCGCAGAGACAGGATGTCCTCTG +
Preference number: 6 (lower is better)
Translates to: GGSSVCGSLLPG*WPVSAETGCPL
Trigger: CAGAGGACATCCTGTCTCTGCGGAGACAGGCCAGCATCCTGGAAGGAGAGAACCGCATACTGAGGAGCCGCC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000398814.8
ENST00000558659.5
ENST00000558821.5
ENST00000560565.1
ENST00000672175.1
ENST00000672263.1
ENST00000673091.1
ENST00000673214.1
ENST00000673367.1
ENST00000673517.1
CDS GCA 72 bp TCTGAAGTACCAGAGAGGAGATCCGGCAGGGCCTGTTaGTGCAGAATGATGGGGGCCTGCTGGTGGCGGTTC +
Preference number: 6 (lower is better)
Translates to: SEVPERRSGRAC*CRMMGACWWRF
Trigger: GAACCGCCACCAGCAGGCCCCCATCATTCTGCAGCAACAGGCCCTGCCGGATCTCCTCTCTGGTACTTCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000321374.9
ENST00000398814.8
ENST00000558821.5
ENST00000672175.1
ENST00000672263.1
ENST00000673517.1
CDS GCA 72 bp CTCGGTTGTTGCTGTAATGCTGGTCTCCTGTCTGTGTaGGGCACTGCAGATGTGGCGGGCAGGGGCTTGGGA +
Preference number: 6 (lower is better)
Translates to: LGCCCNAGLLSV*GTADVAGRGLG
Trigger: TCCCAAGCCCCTGCCCGCCACATCTGCAGTGCCGCACACAGACAGGAGACCAGCATTACAGCAACAACCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558645.5
ENST00000560148.5
ENST00000671751.1
ENST00000672359.1
CDS CCA 72 bp TGGGAGCCTAGGACTCCTGACCCCCAGCCCTGGAGTTaGCTCCACAATGGCTTTTCTCAGGGCCCAGTGACT +
Preference number: 6 (lower is better)
Translates to: WEPRTPDPQPWS*LHNGFSQGPVT
Trigger: AGTCACTGGGCCCTGAGAAAAGCCATTGTGGAGCCAACTCCAGGGCTGGGGGTCAGGAGTCCTAGGCTCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000268082.4
ENST00000321374.9
ENST00000558821.5
ENST00000672263.1