RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CCDC174 (Homo sapiens)

Ensembl gene IDs: ENSG00000154781

Ensembl transcript IDs: ENST00000303688.8, ENST00000383794.7, ENST00000463438.5, ENST00000465759.1, ENST00000476763.1, ENST00000611584.4

Found 329 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGGGGCACTCCCTTCCACACTGCAGCACTGCGGGAACCGAGACAATaGCATCGCAGAGGACCTGCAGGGGACAGGCTACTTCACTCACTC +
Preference number: 1 (lower is better)
Translates to: WGTPFHTAALREPRQ*HRRGPAGDRLLHSL
Trigger: GAGTGAGTGAAGTAGCCTGTCCCCTGCAGGTCCTCTGCGATGGCATTGTCTCGGTTCCCGCAGTGCTGCAGTGTGGAAGGGAGTGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
3UTR GCA 90 bp CACTGCAGCACTGCGGGAACCGAGACAATGCCATCGCAGAGGACCTaGAGGGGACAGGCTACTTCACTCACTCCTCTCCTTCCCACTCTT +
Preference number: 1 (lower is better)
Translates to: HCSTAGTETMPSQRT*RGQATSLTPLLPTL
Trigger: AAGAGTGGGAAGGAGAGGAGTGAGTGAAGTAGCCTGTCCCCTGCAGGTCCTCTGCGATGGCATTGTCTCGGTTCCCGCAGTGCTGCAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
3UTR TCA 90 bp TGGTCATCAACTCTCAACTGCTTGTGTGCAGCTGTAGGAACCCTCTaGGGTGTGGCAGGTAGAGGATGGGGTGGGTGCCCAGGCACACTG +
Preference number: 1 (lower is better)
Translates to: WSSTLNCLCAAVGTL*GVAGRGWGGCPGTL
Trigger: CAGTGTGCCTGGGCACCCACCCCATCCTCTACCTGCCACACCTCAGAGGGTTCCTACAGCTGCACACAAGCAGTTGAGAGTTGATGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
3UTR GCA 90 bp TCCAGTGTGTCATCTGTAATGAGGATGGGGCACTCCCTTCCACACTaGAGCACTGCGGGAACCGAGACAATGCCATCGCAGAGGACCTGC +
Preference number: 1 (lower is better)
Translates to: SSVSSVMRMGHSLPH*STAGTETMPSQRTC
Trigger: GCAGGTCCTCTGCGATGGCATTGTCTCGGTTCCCGCAGTGCTGCAGTGTGGAAGGGAGTGCCCCATCCTCATTACAGATGACACACTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
3UTR CCA 90 bp TTCTCACAGCACTCACTGGCCTGGGAACCAGCTGTGGGAGCCCTATaGGCCTGGTCATCAACTCTCAACTGCTTGTGTGCAGCTGTAGGA +
Preference number: 1 (lower is better)
Translates to: FSQHSLAWEPAVGAL*AWSSTLNCLCAAVG
Trigger: TCCTACAGCTGCACACAAGCAGTTGAGAGTTGATGACCAGGCCCATAGGGCTCCCACAGCTGGTTCCCAGGCCAGTGAGTGCTGTGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
3UTR CCA 90 bp AGAACAAGGACTTGTGCTACTGTATTCTCACAGCACTCACTGGCCTaGGAACCAGCTGTGGGAGCCCTATGGGCCTGGTCATCAACTCTC +
Preference number: 1 (lower is better)
Translates to: RTRTCATVFSQHSLA*EPAVGALWAWSSTL
Trigger: GAGAGTTGATGACCAGGCCCATAGGGCTCCCACAGCTGGTTCCCAGGCCAGTGAGTGCTGTGAGAATACAGTAGCACAAGTCCTTGTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
3UTR CCA 90 bp TTCAGAGAACAAGGACTTGTGCTACTGTATTCTCACAGCACTCACTaGCCTGGGAACCAGCTGTGGGAGCCCTATGGGCCTGGTCATCAA +
Preference number: 1 (lower is better)
Translates to: FREQGLVLLYSHSTH*PGNQLWEPYGPGHQ
Trigger: TTGATGACCAGGCCCATAGGGCTCCCACAGCTGGTTCCCAGGCCAGTGAGTGCTGTGAGAATACAGTAGCACAAGTCCTTGTTCTCTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
3UTR TCA 90 bp GCCTCCCATGCAGTTTTCCACTGCTTGACAGGGAGAAATTCCTCGTaGCCTATGGTCCATCGGCTGATCTGGAAGCTGAACCCTTGGAAT +
Preference number: 1 (lower is better)
Translates to: ASHAVFHCLTGRNSS*PMVHRLIWKLNPWN
Trigger: ATTCCAAGGGTTCAGCTTCCAGATCAGCCGATGGACCATAGGTCACGAGGAATTTCTCCCTGTCAAGCAGTGGAAAACTGCATGGGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
3UTR TCA 90 bp TGGACTACGAAGAGCTCCTCCTGGTCTTCCTTATCATTTCCTATGTaGTTACTTCCGGGTCCTCTTGGAGAACAGAGCATTTTGCCTCCC +
Preference number: 1 (lower is better)
Translates to: WTTKSSSWSSLSFPM*LLPGPLGEQSILPP
Trigger: GGGAGGCAAAATGCTCTGTTCTCCAAGAGGACCCGGAAGTAATCACATAGGAAATGATAAGGAAGACCAGGAGGAGCTCTTCGTAGTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
3UTR GCA 90 bp GATTACTTCCGGGTCCTCTTGGAGAACAGAGCATTTTGCCTCCCATaGAGTTTTCCACTGCTTGACAGGGAGAAATTCCTCGTGACCTAT +
Preference number: 1 (lower is better)
Translates to: DYFRVLLENRAFCLP*SFPLLDREKFLVTY
Trigger: ATAGGTCACGAGGAATTTCTCCCTGTCAAGCAGTGGAAAACTGCATGGGAGGCAAAATGCTCTGTTCTCCAAGAGGACCCGGAAGTAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
3UTR-3UTR TCA 90 bp GAGGATGGGGCACTCCCTTCCACACTGCAGCACTGCGGGAACCGAGACAATGCCGCCCAGGCACACTGCTaGCTTTCTGGAGCCCTGCCC +
Preference number: 2 (lower is better)
Translates to: EDGALPSTLQHCGNRDNAAQAHC*LSGALP
Trigger: GGGCAGGGCTCCAGAAAGTCAGCAGTGTGCCTGGGC...GGCATTGTCTCGGTTCCCGCAGTGCTGCAGTGTGGAAGGGAGTGCCCCATCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
3UTR-3UTR CCA 90 bp GAGGATGGGGCACTCCCTTCCACACTGCAGCACTGCGGGAACCGAGACAATGCCGGGGCGACAGGGAGGTaGGATGCACTGAAAAGCTCT +
Preference number: 2 (lower is better)
Translates to: EDGALPSTLQHCGNRDNAGATGR*DALKSS
Trigger: AGAGCTTTTCAGTGCATCCCACCTCCCTGTCGCCCC...GGCATTGTCTCGGTTCCCGCAGTGCTGCAGTGTGGAAGGGAGTGCCCCATCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
3UTR-3UTR CCA 90 bp GAGGATGGGGCACTCCCTTCCACACTGCAGCACTGCGGGAACCGAGACAATGCCGCTGTGGGAGCCCTATaGGCCTGGTCATCAACTCTC +
Preference number: 2 (lower is better)
Translates to: EDGALPSTLQHCGNRDNAAVGAL*AWSSTL
Trigger: GAGAGTTGATGACCAGGCCCATAGGGCTCCCACAGC...GGCATTGTCTCGGTTCCCGCAGTGCTGCAGTGTGGAAGGGAGTGCCCCATCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
3UTR-3UTR CCA 90 bp GCACTCCCTTCCACACTGCAGCACTGCGGGAACCGAGACAATGCCATCGCAGAGGGGGCGACAGGGAGGTaGGATGCACTGAAAAGCTCT +
Preference number: 2 (lower is better)
Translates to: ALPSTLQHCGNRDNAIAEGATGR*DALKSS
Trigger: AGAGCTTTTCAGTGCATCCCACCTCCCTGTCGCCCC...CTCTGCGATGGCATTGTCTCGGTTCCCGCAGTGCTGCAGTGTGGAAGGGAGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
3UTR-3UTR TCA 90 bp CCTGAATGTGAGGAAGCCGAGCATGGGGGCGACAGGGAGGTGGGATGCACTGAAGGGAGAAATTCCTCGTaGCCTATGGTCCATCGGCTG +
Preference number: 2 (lower is better)
Translates to: PECEEAEHGGDREVGCTEGRNSS*PMVHRL
Trigger: CAGCCGATGGACCATAGGTCACGAGGAATTTCTCCC...TTCAGTGCATCCCACCTCCCTGTCGCCCCCATGCTCGGCTTCCTCACATTCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
3UTR-3UTR TCA 90 bp GCACTCCCTTCCACACTGCAGCACTGCGGGAACCGAGACAATGCCATCGCAGAGGGGAGAAATTCCTCGTaGCCTATGGTCCATCGGCTG +
Preference number: 2 (lower is better)
Translates to: ALPSTLQHCGNRDNAIAEGRNSS*PMVHRL
Trigger: CAGCCGATGGACCATAGGTCACGAGGAATTTCTCCC...CTCTGCGATGGCATTGTCTCGGTTCCCGCAGTGCTGCAGTGTGGAAGGGAGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
3UTR-3UTR TCA 90 bp CCCACCCCCAACCCTCTCCTTATTACTAATGACACGGGAACCCACCTGCTCCACAGGCACATCAGTCTCTaGCCAGGTCCAGCAGCCTCC +
Preference number: 2 (lower is better)
Translates to: PTPNPLLITNDTGTHLLHRHISL*PGPAAS
Trigger: GGAGGCTGCTGGACCTGGTCAGAGACTGATGTGCCT...GTGGAGCAGGTGGGTTCCCGTGTCATTAGTAATAAGGAGAGGGTTGGGGGTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
3UTR-3UTR GCA 90 bp TGCTACTGTATTCTCACAGCACTCACTGGCCTGGGAACCAGCTGTGGGAGCCCTAGAGGATGGGGTGGGTaGCCAGGCACACTGCTGACT +
Preference number: 2 (lower is better)
Translates to: CYCILTALTGLGTSCGSPRGWGG*PGTLLT
Trigger: AGTCAGCAGTGTGCCTGGGCACCCACCCCATCCTCT...AGGGCTCCCACAGCTGGTTCCCAGGCCAGTGAGTGCTGTGAGAATACAGTAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
3UTR-3UTR CCA 90 bp CCACACTCCAGTGTGTCATCTGTAATGAGGATGGGGCACTCCCTTCCACACTGCCCTGGGAACCAGCTGTaGGAGCCCTATGGGCCTGGT +
Preference number: 2 (lower is better)
Translates to: PHSSVSSVMRMGHSLPHCPGNQL*EPYGPG
Trigger: ACCAGGCCCATAGGGCTCCCACAGCTGGTTCCCAGG...GCAGTGTGGAAGGGAGTGCCCCATCCTCATTACAGATGACACACTGGAGTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
3UTR-3UTR CCA 90 bp CCACACTCCAGTGTGTCATCTGTAATGAGGATGGGGCACTCCCTTCCACACTGCCAGCACTCACTGGCCTaGGAACCAGCTGTGGGAGCC +
Preference number: 2 (lower is better)
Translates to: PHSSVSSVMRMGHSLPHCQHSLA*EPAVGA
Trigger: GGCTCCCACAGCTGGTTCCCAGGCCAGTGAGTGCTG...GCAGTGTGGAAGGGAGTGCCCCATCCTCATTACAGATGACACACTGGAGTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
3UTR-3UTR CCA 90 bp ACCCTGCACAAGTCATCGACCCCTCCACACTCCAGTGTGTCATCTGTAATGAGGCCTGGGAACCAGCTGTaGGAGCCCTATGGGCCTGGT +
Preference number: 2 (lower is better)
Translates to: TLHKSSTPPHSSVSSVMRPGNQL*EPYGPG
Trigger: ACCAGGCCCATAGGGCTCCCACAGCTGGTTCCCAGG...CCTCATTACAGATGACACACTGGAGTGTGGAGGGGTCGATGACTTGTGCAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
3UTR-3UTR TCA 90 bp CCACACTCCAGTGTGTCATCTGTAATGAGGATGGGGCACTCCCTTCCACACTGCGCTGTAGGAACCCTCTaGGGTGTGGCAGGTAGAGGA +
Preference number: 2 (lower is better)
Translates to: PHSSVSSVMRMGHSLPHCAVGTL*GVAGRG
Trigger: TCCTCTACCTGCCACACCTCAGAGGGTTCCTACAGC...GCAGTGTGGAAGGGAGTGCCCCATCCTCATTACAGATGACACACTGGAGTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
3UTR-3UTR GCA 90 bp GAGGATGGGGCACTCCCTTCCACACTGCAGCACTGCGGGAACCGAGACAATGCCGCATTTTGCCTCCCATaGAGTTTTCCACTGCTTGAC +
Preference number: 2 (lower is better)
Translates to: EDGALPSTLQHCGNRDNAAFCLP*SFPLLD
Trigger: GTCAAGCAGTGGAAAACTGCATGGGAGGCAAAATGC...GGCATTGTCTCGGTTCCCGCAGTGCTGCAGTGTGGAAGGGAGTGCCCCATCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
3UTR-3UTR GCA 90 bp ACCCTGCACAAGTCATCGACCCCTCCACACTCCAGTGTGTCATCTGTAATGAGGCACTCCCTTCCACACTaGAGCACTGCGGGAACCGAG +
Preference number: 2 (lower is better)
Translates to: TLHKSSTPPHSSVSSVMRHSLPH*STAGTE
Trigger: CTCGGTTCCCGCAGTGCTGCAGTGTGGAAGGGAGTG...CCTCATTACAGATGACACACTGGAGTGTGGAGGGGTCGATGACTTGTGCAGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
3UTR-3UTR CCA 90 bp CCTGAATGTGAGGAAGCCGAGCATGGGGGCGACAGGGAGGTGGGATGCACTGAAGTCCATCGGCTGATCTaGAAGCTGAACCCTTGGAAT +
Preference number: 2 (lower is better)
Translates to: PECEEAEHGGDREVGCTEVHRLI*KLNPWN
Trigger: ATTCCAAGGGTTCAGCTTCCAGATCAGCCGATGGAC...TTCAGTGCATCCCACCTCCCTGTCGCCCCCATGCTCGGCTTCCTCACATTCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
3UTR-3UTR CCA 90 bp GCACTCCCTTCCACACTGCAGCACTGCGGGAACCGAGACAATGCCATCGCAGAGGTCCATCGGCTGATCTaGAAGCTGAACCCTTGGAAT +
Preference number: 2 (lower is better)
Translates to: ALPSTLQHCGNRDNAIAEVHRLI*KLNPWN
Trigger: ATTCCAAGGGTTCAGCTTCCAGATCAGCCGATGGAC...CTCTGCGATGGCATTGTCTCGGTTCCCGCAGTGCTGCAGTGTGGAAGGGAGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
3UTR-3UTR CCA 90 bp GCACTCCCTTCCACACTGCAGCACTGCGGGAACCGAGACAATGCCATCGCAGAGCCACTTCTACCTTTCTaGACTACGAAGAGCTCCTCC +
Preference number: 2 (lower is better)
Translates to: ALPSTLQHCGNRDNAIAEPLLPF*TTKSSS
Trigger: GGAGGAGCTCTTCGTAGTCCAGAAAGGTAGAAGTGG...CTCTGCGATGGCATTGTCTCGGTTCCCGCAGTGCTGCAGTGTGGAAGGGAGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
3UTR-3UTR CCA 90 bp CCACACTCCAGTGTGTCATCTGTAATGAGGATGGGGCACTCCCTTCCACACTGCGGGGCGACAGGGAGGTaGGATGCACTGAAAAGCTCT +
Preference number: 2 (lower is better)
Translates to: PHSSVSSVMRMGHSLPHCGATGR*DALKSS
Trigger: AGAGCTTTTCAGTGCATCCCACCTCCCTGTCGCCCC...GCAGTGTGGAAGGGAGTGCCCCATCCTCATTACAGATGACACACTGGAGTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
3UTR-3UTR TCA 90 bp CCCACCCCCAACCCTCTCCTTATTACTAATGACACGGGAACCCACCTGCTCCACGGAGGTGGGATGCACTaGAAAGCTCTAACCATTGCC +
Preference number: 2 (lower is better)
Translates to: PTPNPLLITNDTGTHLLHGGGMH*KALTIA
Trigger: GGCAATGGTTAGAGCTTTTCAGTGCATCCCACCTCC...GTGGAGCAGGTGGGTTCCCGTGTCATTAGTAATAAGGAGAGGGTTGGGGGTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
3UTR-3UTR TCA 90 bp TGCTACTGTATTCTCACAGCACTCACTGGCCTGGGAACCAGCTGTGGGAGCCCTGGAGGTGGGATGCACTaGAAAGCTCTAACCATTGCC +
Preference number: 2 (lower is better)
Translates to: CYCILTALTGLGTSCGSPGGGMH*KALTIA
Trigger: GGCAATGGTTAGAGCTTTTCAGTGCATCCCACCTCC...AGGGCTCCCACAGCTGGTTCCCAGGCCAGTGAGTGCTGTGAGAATACAGTAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
3UTR-3UTR GCA 90 bp CCACACTCCAGTGTGTCATCTGTAATGAGGATGGGGCACTCCCTTCCACACTGCCCAACCCGAAGTCTGTaGCTCCTAGGGAAAGGACAG +
Preference number: 2 (lower is better)
Translates to: PHSSVSSVMRMGHSLPHCPTRSL*LLGKGQ
Trigger: CTGTCCTTTCCCTAGGAGGCACAGACTTCGGGTTGG...GCAGTGTGGAAGGGAGTGCCCCATCCTCATTACAGATGACACACTGGAGTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
3UTR-3UTR CCA 90 bp GAGGATGGGGCACTCCCTTCCACACTGCAGCACTGCGGGAACCGAGACAATGCCTGGAAGCTGAACCCTTaGAATAAAGACACCTGCATG +
Preference number: 2 (lower is better)
Translates to: EDGALPSTLQHCGNRDNAWKLNP*NKDTCM
Trigger: CATGCAGGTGTCTTTATTCCAAGGGTTCAGCTTCCA...GGCATTGTCTCGGTTCCCGCAGTGCTGCAGTGTGGAAGGGAGTGCCCCATCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
3UTR-3UTR CCA 90 bp ACCCTGCACAAGTCATCGACCCCTCCACACTCCAGTGTGTCATCTGTAATGAGGACACTGCTGACTTTCTaGAGCCCTGCCCACCCCCAA +
Preference number: 2 (lower is better)
Translates to: TLHKSSTPPHSSVSSVMRTLLTF*SPAHPQ
Trigger: TTGGGGGTGGGCAGGGCTCCAGAAAGTCAGCAGTGT...CCTCATTACAGATGACACACTGGAGTGTGGAGGGGTCGATGACTTGTGCAGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
3UTR-3UTR GCA 90 bp GAGGATGGGGCACTCCCTTCCACACTGCAGCACTGCGGGAACCGAGACAATGCCGAGAACAAGGACTTGTaGTACTGTATTCTCACAGCA +
Preference number: 2 (lower is better)
Translates to: EDGALPSTLQHCGNRDNAENKDL*YCILTA
Trigger: TGCTGTGAGAATACAGTAGCACAAGTCCTTGTTCTC...GGCATTGTCTCGGTTCCCGCAGTGCTGCAGTGTGGAAGGGAGTGCCCCATCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
3UTR-3UTR CCA 90 bp CCTGAATGTGAGGAAGCCGAGCATGGGGGCGACAGGGAGGTGGGATGCACTGAATGGAAGCTGAACCCTTaGAATAAAGACACCTGCATG +
Preference number: 2 (lower is better)
Translates to: PECEEAEHGGDREVGCTEWKLNP*NKDTCM
Trigger: CATGCAGGTGTCTTTATTCCAAGGGTTCAGCTTCCA...TTCAGTGCATCCCACCTCCCTGTCGCCCCCATGCTCGGCTTCCTCACATTCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
3UTR-3UTR TCA 90 bp GCACTCCCTTCCACACTGCAGCACTGCGGGAACCGAGACAATGCCATCGCAGAGCCACTTAGAATAAAATaGACAGCCAAGTGGCCAAAG +
Preference number: 2 (lower is better)
Translates to: ALPSTLQHCGNRDNAIAEPLRIK*TAKWPK
Trigger: CTTTGGCCACTTGGCTGTTCATTTTATTCTAAGTGG...CTCTGCGATGGCATTGTCTCGGTTCCCGCAGTGCTGCAGTGTGGAAGGGAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
3UTR-3UTR TCA 90 bp CTTCAGAGAACAAGGACTTGTGCTACTGTATTCTCACAGCACTCACTGGCCTGGGCTGTAGGAACCCTCTaGGGTGTGGCAGGTAGAGGA +
Preference number: 2 (lower is better)
Translates to: LQRTRTCATVFSQHSLAWAVGTL*GVAGRG
Trigger: TCCTCTACCTGCCACACCTCAGAGGGTTCCTACAGC...CCAGGCCAGTGAGTGCTGTGAGAATACAGTAGCACAAGTCCTTGTTCTCTGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
3UTR-3UTR CCA 90 bp CTTCAGAGAACAAGGACTTGTGCTACTGTATTCTCACAGCACTCACTGGCCTGGGAACCCTCTGAGGTGTaGCAGGTAGAGGATGGGGTG +
Preference number: 2 (lower is better)
Translates to: LQRTRTCATVFSQHSLAWEPSEV*QVEDGV
Trigger: CACCCCATCCTCTACCTGCCACACCTCAGAGGGTTC...CCAGGCCAGTGAGTGCTGTGAGAATACAGTAGCACAAGTCCTTGTTCTCTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
3UTR-3UTR TCA 90 bp GCACTCCCTTCCACACTGCAGCACTGCGGGAACCGAGACAATGCCATCGCAGAGTTATCATTTCCTATGTaGTTACTTCCGGGTCCTCTT +
Preference number: 2 (lower is better)
Translates to: ALPSTLQHCGNRDNAIAELSFPM*LLPGPL
Trigger: AAGAGGACCCGGAAGTAATCACATAGGAAATGATAA...CTCTGCGATGGCATTGTCTCGGTTCCCGCAGTGCTGCAGTGTGGAAGGGAGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
3UTR-3UTR TCA 90 bp ACCCTGCACAAGTCATCGACCCCTCCACACTCCAGTGTGTCATCTGTAATGAGGTCAACACACATTTACTaGATGCCCACTGCACACAGG +
Preference number: 2 (lower is better)
Translates to: TLHKSSTPPHSSVSSVMRSTHIY*MPTAHR
Trigger: CCTGTGTGCAGTGGGCATTCAGTAAATGTGTGTTGA...CCTCATTACAGATGACACACTGGAGTGTGGAGGGGTCGATGACTTGTGCAGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
3UTR-3UTR GCA 90 bp CCACACTCCAGTGTGTCATCTGTAATGAGGATGGGGCACTCCCTTCCACACTGCCATGCAGTTTTCCACTaGTTGACAGGGAGAAATTCC +
Preference number: 2 (lower is better)
Translates to: PHSSVSSVMRMGHSLPHCHAVFH*LTGRNS
Trigger: GGAATTTCTCCCTGTCAAGCAGTGGAAAACTGCATG...GCAGTGTGGAAGGGAGTGCCCCATCCTCATTACAGATGACACACTGGAGTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
3UTR-3UTR GCA 90 bp ACCCTGCACAAGTCATCGACCCCTCCACACTCCAGTGTGTCATCTGTAATGAGGCACACATTTACTGAATaGCCACTGCACACAGGAGTG +
Preference number: 2 (lower is better)
Translates to: TLHKSSTPPHSSVSSVMRHTFTE*PLHTGV
Trigger: CACTCCTGTGTGCAGTGGGCATTCAGTAAATGTGTG...CCTCATTACAGATGACACACTGGAGTGTGGAGGGGTCGATGACTTGTGCAGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
3UTR-3UTR CCA 90 bp CCACACTCCAGTGTGTCATCTGTAATGAGGATGGGGCACTCCCTTCCACACTGCACGAAGAGCTCCTCCTaGTCTTCCTTATCATTTCCT +
Preference number: 2 (lower is better)
Translates to: PHSSVSSVMRMGHSLPHCTKSSS*SSLSFP
Trigger: AGGAAATGATAAGGAAGACCAGGAGGAGCTCTTCGT...GCAGTGTGGAAGGGAGTGCCCCATCCTCATTACAGATGACACACTGGAGTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
3UTR-3UTR GCA 90 bp TGCTACTGTATTCTCACAGCACTCACTGGCCTGGGAACCAGCTGTGGGAGCCCTCTGCATGCTCGGATTTaGAAAAGGAATGGAAAAGAA +
Preference number: 2 (lower is better)
Translates to: CYCILTALTGLGTSCGSPLHARI*KRNGKE
Trigger: TTCTTTTCCATTCCTTTTGCAAATCCGAGCATGCAG...AGGGCTCCCACAGCTGGTTCCCAGGCCAGTGAGTGCTGTGAGAATACAGTAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
3UTR-3UTR CCA 90 bp CTTCAGAGAACAAGGACTTGTGCTACTGTATTCTCACAGCACTCACTGGCCTGGACTTCCGGGTCCTCTTaGAGAACAGAGCATTTTGCC +
Preference number: 2 (lower is better)
Translates to: LQRTRTCATVFSQHSLAWTSGSS*RTEHFA
Trigger: GGCAAAATGCTCTGTTCTCCAAGAGGACCCGGAAGT...CCAGGCCAGTGAGTGCTGTGAGAATACAGTAGCACAAGTCCTTGTTCTCTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
3UTR-3UTR CCA 90 bp ACCCTGCACAAGTCATCGACCCCTCCACACTCCAGTGTGTCATCTGTAATGAGGACGAAGAGCTCCTCCTaGTCTTCCTTATCATTTCCT +
Preference number: 2 (lower is better)
Translates to: TLHKSSTPPHSSVSSVMRTKSSS*SSLSFP
Trigger: AGGAAATGATAAGGAAGACCAGGAGGAGCTCTTCGT...CCTCATTACAGATGACACACTGGAGTGTGGAGGGGTCGATGACTTGTGCAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
3UTR-3UTR GCA 90 bp CTTCAGAGAACAAGGACTTGTGCTACTGTATTCTCACAGCACTCACTGGCCTGGCACACATTTACTGAATaGCCACTGCACACAGGAGTG +
Preference number: 2 (lower is better)
Translates to: LQRTRTCATVFSQHSLAWHTFTE*PLHTGV
Trigger: CACTCCTGTGTGCAGTGGGCATTCAGTAAATGTGTG...CCAGGCCAGTGAGTGCTGTGAGAATACAGTAGCACAAGTCCTTGTTCTCTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
3UTR-3UTR TCA 90 bp TCCTATGTGATTACTTCCGGGTCCTCTTGGAGAACAGAGCATTTTGCCTCCCATCAGTTTTCCACTGCTTaGCAGGGAGAAATTCCTCGT +
Preference number: 2 (lower is better)
Translates to: SYVITSGSSWRTEHFASHQFSTA*QGEIPR
Trigger: ACGAGGAATTTCTCCCTGTCAAGCAGTGGAAAACTG...ATGGGAGGCAAAATGCTCTGTTCTCCAAGAGGACCCGGAAGTAATCACATAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
3UTR-3UTR TCA 90 bp ACCCTGCACAAGTCATCGACCCCTCCACACTCCAGTGTGTCATCTGTAATGAGGTTATCATTTCCTATGTaGTTACTTCCGGGTCCTCTT +
Preference number: 2 (lower is better)
Translates to: TLHKSSTPPHSSVSSVMRLSFPM*LLPGPL
Trigger: AAGAGGACCCGGAAGTAATCACATAGGAAATGATAA...CCTCATTACAGATGACACACTGGAGTGTGGAGGGGTCGATGACTTGTGCAGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
3UTR-3UTR GCA 90 bp TCCCACTTCTACCTTTCTGGACTACGAAGAGCTCCTCCTGGTCTTCCTTATCATGCATTTTGCCTCCCATaGAGTTTTCCACTGCTTGAC +
Preference number: 2 (lower is better)
Translates to: SHFYLSGLRRAPPGLPYHAFCLP*SFPLLD
Trigger: GTCAAGCAGTGGAAAACTGCATGGGAGGCAAAATGC...ATGATAAGGAAGACCAGGAGGAGCTCTTCGTAGTCCAGAAAGGTAGAAGTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
3UTR-3UTR TCA 90 bp CTTCAGAGAACAAGGACTTGTGCTACTGTATTCTCACAGCACTCACTGGCCTGGCCACTTAGAATAAAATaGACAGCCAAGTGGCCAAAG +
Preference number: 2 (lower is better)
Translates to: LQRTRTCATVFSQHSLAWPLRIK*TAKWPK
Trigger: CTTTGGCCACTTGGCTGTTCATTTTATTCTAAGTGG...CCAGGCCAGTGAGTGCTGTGAGAATACAGTAGCACAAGTCCTTGTTCTCTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
3UTR-3UTR GCA 90 bp CTTGACAGGGAGAAATTCCTCGTGACCTATGGTCCATCGGCTGATCTGGAAGCTATAAAGACACCTGCATaGTCGGATTTGCAAAAGGAA +
Preference number: 2 (lower is better)
Translates to: LDREKFLVTYGPSADLEAIKTPA*SDLQKE
Trigger: TTCCTTTTGCAAATCCGAGCATGCAGGTGTCTTTAT...AGCTTCCAGATCAGCCGATGGACCATAGGTCACGAGGAATTTCTCCCTGTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
3UTR-3UTR GCA 90 bp CTTGACAGGGAGAAATTCCTCGTGACCTATGGTCCATCGGCTGATCTGGAAGCTTGGAATAAAGACACCTaGATGCTCGGATTTGCAAAA +
Preference number: 2 (lower is better)
Translates to: LDREKFLVTYGPSADLEAWNKDT*MLGFAK
Trigger: TTTTGCAAATCCGAGCATGCAGGTGTCTTTATTCCA...AGCTTCCAGATCAGCCGATGGACCATAGGTCACGAGGAATTTCTCCCTGTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
3UTR-3UTR TCA 90 bp TCCTATGTGATTACTTCCGGGTCCTCTTGGAGAACAGAGCATTTTGCCTCCCATCCACTTAGAATAAAATaGACAGCCAAGTGGCCAAAG +
Preference number: 2 (lower is better)
Translates to: SYVITSGSSWRTEHFASHPLRIK*TAKWPK
Trigger: CTTTGGCCACTTGGCTGTTCATTTTATTCTAAGTGG...ATGGGAGGCAAAATGCTCTGTTCTCCAAGAGGACCCGGAAGTAATCACATAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
3UTR-3UTR GCA 90 bp CTTCAGAGAACAAGGACTTGTGCTACTGTATTCTCACAGCACTCACTGGCCTGGCTGCATGCTCGGATTTaGAAAAGGAATGGAAAAGAA +
Preference number: 2 (lower is better)
Translates to: LQRTRTCATVFSQHSLAWLHARI*KRNGKE
Trigger: TTCTTTTCCATTCCTTTTGCAAATCCGAGCATGCAG...CCAGGCCAGTGAGTGCTGTGAGAATACAGTAGCACAAGTCCTTGTTCTCTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
3UTR-3UTR GCA 90 bp CCTGGTCTTCCTTATCATTTCCTATGTGATTACTTCCGGGTCCTCTTGGAGAACCATGCAGTTTTCCACTaGTTGACAGGGAGAAATTCC +
Preference number: 2 (lower is better)
Translates to: PGLPYHFLCDYFRVLLENHAVFH*LTGRNS
Trigger: GGAATTTCTCCCTGTCAAGCAGTGGAAAACTGCATG...GTTCTCCAAGAGGACCCGGAAGTAATCACATAGGAAATGATAAGGAAGACCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
3UTR-3UTR GCA 90 bp TCCCACTTCTACCTTTCTGGACTACGAAGAGCTCCTCCTGGTCTTCCTTATCATTGGAATAAAGACACCTaGATGCTCGGATTTGCAAAA +
Preference number: 2 (lower is better)
Translates to: SHFYLSGLRRAPPGLPYHWNKDT*MLGFAK
Trigger: TTTTGCAAATCCGAGCATGCAGGTGTCTTTATTCCA...ATGATAAGGAAGACCAGGAGGAGCTCTTCGTAGTCCAGAAAGGTAGAAGTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
3UTR-3UTR GCA 90 bp CCTGGTCTTCCTTATCATTTCCTATGTGATTACTTCCGGGTCCTCTTGGAGAACATAAAGACACCTGCATaGTCGGATTTGCAAAAGGAA +
Preference number: 2 (lower is better)
Translates to: PGLPYHFLCDYFRVLLENIKTPA*SDLQKE
Trigger: TTCCTTTTGCAAATCCGAGCATGCAGGTGTCTTTAT...GTTCTCCAAGAGGACCCGGAAGTAATCACATAGGAAATGATAAGGAAGACCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
3UTR CAA 90 bp GAGTTTAGAGGTAAGTTTGTAAGAATTCAGGATGTTTGTCTAAGATaGCTTGATACTAGGGCAACAAGACTGAGAGCAGAGGGCACTAAA +
Preference number: 2 (lower is better)
Translates to: EFRGKFVRIQDVCLR*LDTRATRLRAEGTK
Trigger: TTTAGTGCCCTCTGCTCTCAGTCTTGTTGCCCTAGTATCAAGCAATCTTAGACAAACATCCTGAATTCTTACAAACTTACCTCTAAACTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
3UTR GCA 72 bp CCCTTCCACACTGCAGCACTGCGGGAACCGAGACAATaGCATCGCAGAGGACCTGCAGGGGACAGGCTACTT +
Preference number: 3 (lower is better)
Translates to: PFHTAALREPRQ*HRRGPAGDRLL
Trigger: AAGTAGCCTGTCCCCTGCAGGTCCTCTGCGATGGCATTGTCTCGGTTCCCGCAGTGCTGCAGTGTGGAAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
3UTR-3UTR CAA 90 bp GAGGATGGGGCACTCCCTTCCACACTGCAGCACTGCGGGAACCGAGACAATGCCTCAACTCTCAACTGCTaGTGTGCAGCTGTAGGAACC +
Preference number: 3 (lower is better)
Translates to: EDGALPSTLQHCGNRDNASTLNC*CAAVGT
Trigger: GGTTCCTACAGCTGCACACAAGCAGTTGAGAGTTGA...GGCATTGTCTCGGTTCCCGCAGTGCTGCAGTGTGGAAGGGAGTGCCCCATCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
3UTR TCA 72 bp AGCCGAGCATGGGGGCGACAGGGAGGTGGGATGCACTaGAAAGCTCTAACCATTGCCGCTAAGGCACATCAG +
Preference number: 3 (lower is better)
Translates to: SRAWGRQGGGMH*KALTIAAKAHQ
Trigger: CTGATGTGCCTTAGCGGCAATGGTTAGAGCTTTTCAGTGCATCCCACCTCCCTGTCGCCCCCATGCTCGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
3UTR GCA 72 bp ACTGCGGGAACCGAGACAATGCCATCGCAGAGGACCTaGAGGGGACAGGCTACTTCACTCACTCCTCTCCTT +
Preference number: 3 (lower is better)
Translates to: TAGTETMPSQRT*RGQATSLTPLL
Trigger: AAGGAGAGGAGTGAGTGAAGTAGCCTGTCCCCTGCAGGTCCTCTGCGATGGCATTGTCTCGGTTCCCGCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
3UTR CCA 72 bp CACTCACTGGCCTGGGAACCAGCTGTGGGAGCCCTATaGGCCTGGTCATCAACTCTCAACTGCTTGTGTGCA +
Preference number: 3 (lower is better)
Translates to: HSLAWEPAVGAL*AWSSTLNCLCA
Trigger: TGCACACAAGCAGTTGAGAGTTGATGACCAGGCCCATAGGGCTCCCACAGCTGGTTCCCAGGCCAGTGAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
3UTR GCA 72 bp TCATCTGTAATGAGGATGGGGCACTCCCTTCCACACTaGAGCACTGCGGGAACCGAGACAATGCCATCGCAG +
Preference number: 3 (lower is better)
Translates to: SSVMRMGHSLPH*STAGTETMPSQ
Trigger: CTGCGATGGCATTGTCTCGGTTCCCGCAGTGCTGCAGTGTGGAAGGGAGTGCCCCATCCTCATTACAGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
3UTR CCA 72 bp ACTTGTGCTACTGTATTCTCACAGCACTCACTGGCCTaGGAACCAGCTGTGGGAGCCCTATGGGCCTGGTCA +
Preference number: 3 (lower is better)
Translates to: TCATVFSQHSLA*EPAVGALWAWS
Trigger: TGACCAGGCCCATAGGGCTCCCACAGCTGGTTCCCAGGCCAGTGAGTGCTGTGAGAATACAGTAGCACAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
3UTR-3UTR CAA 90 bp CCCACCCCCAACCCTCTCCTTATTACTAATGACACGGGAACCCACCTGCTCCACCCTGCATGCTCGGATTaGCAAAAGGAATGGAAAAGA +
Preference number: 3 (lower is better)
Translates to: PTPNPLLITNDTGTHLLHPACSD*QKEWKR
Trigger: TCTTTTCCATTCCTTTTGCAAATCCGAGCATGCAGG...GTGGAGCAGGTGGGTTCCCGTGTCATTAGTAATAAGGAGAGGGTTGGGGGTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
3UTR-3UTR CAA 90 bp ACCCTGCACAAGTCATCGACCCCTCCACACTCCAGTGTGTCATCTGTAATGAGGTACTTCCGGGTCCTCTaGGAGAACAGAGCATTTTGC +
Preference number: 3 (lower is better)
Translates to: TLHKSSTPPHSSVSSVMRYFRVL*ENRAFC
Trigger: GCAAAATGCTCTGTTCTCCAAGAGGACCCGGAAGTA...CCTCATTACAGATGACACACTGGAGTGTGGAGGGGTCGATGACTTGTGCAGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
3UTR TCA 72 bp GCAGTTTTCCACTGCTTGACAGGGAGAAATTCCTCGTaGCCTATGGTCCATCGGCTGATCTGGAAGCTGAAC +
Preference number: 3 (lower is better)
Translates to: AVFHCLTGRNSS*PMVHRLIWKLN
Trigger: GTTCAGCTTCCAGATCAGCCGATGGACCATAGGTCACGAGGAATTTCTCCCTGTCAAGCAGTGGAAAACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
3UTR-3UTR CAA 90 bp CTTCAGAGAACAAGGACTTGTGCTACTGTATTCTCACAGCACTCACTGGCCTGGGCAGTTTTCCACTGCTaGACAGGGAGAAATTCCTCG +
Preference number: 3 (lower is better)
Translates to: LQRTRTCATVFSQHSLAWAVFHC*TGRNSS
Trigger: CGAGGAATTTCTCCCTGTCAAGCAGTGGAAAACTGC...CCAGGCCAGTGAGTGCTGTGAGAATACAGTAGCACAAGTCCTTGTTCTCTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
3UTR-3UTR CAA 90 bp CTTCAGAGAACAAGGACTTGTGCTACTGTATTCTCACAGCACTCACTGGCCTGGTACTTCCGGGTCCTCTaGGAGAACAGAGCATTTTGC +
Preference number: 3 (lower is better)
Translates to: LQRTRTCATVFSQHSLAWYFRVL*ENRAFC
Trigger: GCAAAATGCTCTGTTCTCCAAGAGGACCCGGAAGTA...CCAGGCCAGTGAGTGCTGTGAGAATACAGTAGCACAAGTCCTTGTTCTCTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
3UTR-3UTR CAA 90 bp TCCCACTTCTACCTTTCTGGACTACGAAGAGCTCCTCCTGGTCTTCCTTATCATGCAGTTTTCCACTGCTaGACAGGGAGAAATTCCTCG +
Preference number: 3 (lower is better)
Translates to: SHFYLSGLRRAPPGLPYHAVFHC*TGRNSS
Trigger: CGAGGAATTTCTCCCTGTCAAGCAGTGGAAAACTGC...ATGATAAGGAAGACCAGGAGGAGCTCTTCGTAGTCCAGAAAGGTAGAAGTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
3UTR-3UTR CAA 90 bp CATTTCCTATGTGATTACTTCCGGGTCCTCTTGGAGAACAGAGCATTTTGCCTCGCAGTTTTCCACTGCTaGACAGGGAGAAATTCCTCG +
Preference number: 3 (lower is better)
Translates to: HFLCDYFRVLLENRAFCLAVFHC*TGRNSS
Trigger: CGAGGAATTTCTCCCTGTCAAGCAGTGGAAAACTGC...GAGGCAAAATGCTCTGTTCTCCAAGAGGACCCGGAAGTAATCACATAGGAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
3UTR-3UTR CAA 90 bp CCACTTCTACCTTTCTGGACTACGAAGAGCTCCTCCTGGTCTTCCTTATCATTTTACTTCCGGGTCCTCTaGGAGAACAGAGCATTTTGC +
Preference number: 3 (lower is better)
Translates to: PLLPFWTTKSSSWSSLSFYFRVL*ENRAFC
Trigger: GCAAAATGCTCTGTTCTCCAAGAGGACCCGGAAGTA...AAATGATAAGGAAGACCAGGAGGAGCTCTTCGTAGTCCAGAAAGGTAGAAGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
3UTR-3UTR CAA 90 bp CCTGGTCTTCCTTATCATTTCCTATGTGATTACTTCCGGGTCCTCTTGGAGAACCCTGCATGCTCGGATTaGCAAAAGGAATGGAAAAGA +
Preference number: 3 (lower is better)
Translates to: PGLPYHFLCDYFRVLLENPACSD*QKEWKR
Trigger: TCTTTTCCATTCCTTTTGCAAATCCGAGCATGCAGG...GTTCTCCAAGAGGACCCGGAAGTAATCACATAGGAAATGATAAGGAAGACCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
3UTR CCA 72 bp CTTATCATTTCCTATGTGATTACTTCCGGGTCCTCTTaGAGAACAGAGCATTTTGCCTCCCATGCAGTTTTC +
Preference number: 3 (lower is better)
Translates to: LIISYVITSGSS*RTEHFASHAVF
Trigger: GAAAACTGCATGGGAGGCAAAATGCTCTGTTCTCCAAGAGGACCCGGAAGTAATCACATAGGAAATGATAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR TCA 90 bp CCTGAATGTGAGGAAGCCGAGCATGGGGGCGACAGGGAGGTGGGATGCACTGAAGCCCAGGCACACTGCTaGCTTTCTGGAGCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: PECEEAEHGGDREVGCTEAQAHC*LSGALP
Trigger: GGGCAGGGCTCCAGAAAGTCAGCAGTGTGCCTGGGC...TTCAGTGCATCCCACCTCCCTGTCGCCCCCATGCTCGGCTTCCTCACATTCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CCA 90 bp GAGGATGGGGCACTCCCTTCCACACTGCAGCACTGCGGGAACCGAGACAATGCCCCTGGGAACCAGCTGTaGGAGCCCTATGGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: EDGALPSTLQHCGNRDNAPGNQL*EPYGPG
Trigger: ACCAGGCCCATAGGGCTCCCACAGCTGGTTCCCAGG...GGCATTGTCTCGGTTCCCGCAGTGCTGCAGTGTGGAAGGGAGTGCCCCATCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CCA 90 bp CCTGAATGTGAGGAAGCCGAGCATGGGGGCGACAGGGAGGTGGGATGCACTGAACCTGGGAACCAGCTGTaGGAGCCCTATGGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: PECEEAEHGGDREVGCTEPGNQL*EPYGPG
Trigger: ACCAGGCCCATAGGGCTCCCACAGCTGGTTCCCAGG...TTCAGTGCATCCCACCTCCCTGTCGCCCCCATGCTCGGCTTCCTCACATTCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CCA 90 bp TGCTACTGTATTCTCACAGCACTCACTGGCCTGGGAACCAGCTGTGGGAGCCCTAGCAGGACGTGGGGTTaGCACAGCCTCTGGCTCCGG +
Preference number: 4 (lower is better)
Translates to: CYCILTALTGLGTSCGSPSRTWG*HSLWLR
Trigger: CCGGAGCCAGAGGCTGTGCCAACCCCACGTCCTGCT...AGGGCTCCCACAGCTGGTTCCCAGGCCAGTGAGTGCTGTGAGAATACAGTAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CCA 90 bp CCCACCCCCAACCCTCTCCTTATTACTAATGACACGGGAACCCACCTGCTCCACCTGGGCAGCAGGACGTaGGGTTGGCACAGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: PTPNPLLITNDTGTHLLHLGSRT*GWHSLW
Trigger: CCAGAGGCTGTGCCAACCCCACGTCCTGCTGCCCAG...GTGGAGCAGGTGGGTTCCCGTGTCATTAGTAATAAGGAGAGGGTTGGGGGTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CCA 90 bp GCACTCCCTTCCACACTGCAGCACTGCGGGAACCGAGACAATGCCATCGCAGAGCCACTCCCGGATGTGTaGCACTCCAGGCTTGGTGTC +
Preference number: 4 (lower is better)
Translates to: ALPSTLQHCGNRDNAIAEPLPDV*HSRLGV
Trigger: GACACCAAGCCTGGAGTGCCACACATCCGGGAGTGG...CTCTGCGATGGCATTGTCTCGGTTCCCGCAGTGCTGCAGTGTGGAAGGGAGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR TCA 90 bp GCACTCCCTTCCACACTGCAGCACTGCGGGAACCGAGACAATGCCATCGCAGAGCTCAGCCCGGAGATCTaGCTGCCTCTTCGACCAGTA +
Preference number: 4 (lower is better)
Translates to: ALPSTLQHCGNRDNAIAELSPEI*LPLRPV
Trigger: TACTGGTCGAAGAGGCAGTCAGATCTCCGGGCTGAG...CTCTGCGATGGCATTGTCTCGGTTCCCGCAGTGCTGCAGTGTGGAAGGGAGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR TCA 90 bp TGCTACTGTATTCTCACAGCACTCACTGGCCTGGGAACCAGCTGTGGGAGCCCTGGGGGCAGGAGTGGGTaGCGTATGTTCAGGGCTAGG +
Preference number: 4 (lower is better)
Translates to: CYCILTALTGLGTSCGSPGGRSG*RMFRAR
Trigger: CCTAGCCCTGAACATACGTCACCCACTCCTGCCCCC...AGGGCTCCCACAGCTGGTTCCCAGGCCAGTGAGTGCTGTGAGAATACAGTAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR TCA 90 bp GAGGATGGGGCACTCCCTTCCACACTGCAGCACTGCGGGAACCGAGACAATGCCGGGAGAAATTCCTCGTaGCCTATGGTCCATCGGCTG +
Preference number: 4 (lower is better)
Translates to: EDGALPSTLQHCGNRDNAGRNSS*PMVHRL
Trigger: CAGCCGATGGACCATAGGTCACGAGGAATTTCTCCC...GGCATTGTCTCGGTTCCCGCAGTGCTGCAGTGTGGAAGGGAGTGCCCCATCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR TCA 90 bp GCACTCCCTTCCACACTGCAGCACTGCGGGAACCGAGACAATGCCATCGCAGAGGCTGTAGGAACCCTCTaGGGTGTGGCAGGTAGAGGA +
Preference number: 4 (lower is better)
Translates to: ALPSTLQHCGNRDNAIAEAVGTL*GVAGRG
Trigger: TCCTCTACCTGCCACACCTCAGAGGGTTCCTACAGC...CTCTGCGATGGCATTGTCTCGGTTCCCGCAGTGCTGCAGTGTGGAAGGGAGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CCA 90 bp CCACACTCCAGTGTGTCATCTGTAATGAGGATGGGGCACTCCCTTCCACACTGCAGCAGGACGTGGGGTTaGCACAGCCTCTGGCTCCGG +
Preference number: 4 (lower is better)
Translates to: PHSSVSSVMRMGHSLPHCSRTWG*HSLWLR
Trigger: CCGGAGCCAGAGGCTGTGCCAACCCCACGTCCTGCT...GCAGTGTGGAAGGGAGTGCCCCATCCTCATTACAGATGACACACTGGAGTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CCA 90 bp CCTGAATGTGAGGAAGCCGAGCATGGGGGCGACAGGGAGGTGGGATGCACTGAAGAACCCTCTGAGGTGTaGCAGGTAGAGGATGGGGTG +
Preference number: 4 (lower is better)
Translates to: PECEEAEHGGDREVGCTEEPSEV*QVEDGV
Trigger: CACCCCATCCTCTACCTGCCACACCTCAGAGGGTTC...TTCAGTGCATCCCACCTCCCTGTCGCCCCCATGCTCGGCTTCCTCACATTCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CCA 90 bp GAGGATGGGGCACTCCCTTCCACACTGCAGCACTGCGGGAACCGAGACAATGCCGGAGCCCTATGGGCCTaGTCATCAACTCTCAACTGC +
Preference number: 4 (lower is better)
Translates to: EDGALPSTLQHCGNRDNAGALWA*SSTLNC
Trigger: GCAGTTGAGAGTTGATGACCAGGCCCATAGGGCTCC...GGCATTGTCTCGGTTCCCGCAGTGCTGCAGTGTGGAAGGGAGTGCCCCATCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CCA 90 bp GCACTCCCTTCCACACTGCAGCACTGCGGGAACCGAGACAATGCCATCGCAGAGCACCCTGAACTAACCTaGGGTCTTGGGGAGGAGGGA +
Preference number: 4 (lower is better)
Translates to: ALPSTLQHCGNRDNAIAEHPELT*GLGEEG
Trigger: TCCCTCCTCCCCAAGACCCCAGGTTAGTTCAGGGTG...CTCTGCGATGGCATTGTCTCGGTTCCCGCAGTGCTGCAGTGTGGAAGGGAGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611584.4
CDS-3UTR GCA 90 bp GCACTCCCTTCCACACTGCAGCACTGCGGGAACCGAGACAATGCCATCGCAGAGCCAACCCGAAGTCTGTaGCTCCTAGGGAAAGGACAG +
Preference number: 4 (lower is better)
Translates to: ALPSTLQHCGNRDNAIAEPTRSL*LLGKGQ
Trigger: CTGTCCTTTCCCTAGGAGGCACAGACTTCGGGTTGG...CTCTGCGATGGCATTGTCTCGGTTCCCGCAGTGCTGCAGTGTGGAAGGGAGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR GCA 90 bp TGCTACTGTATTCTCACAGCACTCACTGGCCTGGGAACCAGCTGTGGGAGCCCTACACGGGAACCCACCTaGTCCACTGTGCAGCCCCAA +
Preference number: 4 (lower is better)
Translates to: CYCILTALTGLGTSCGSPTREPT*STVQPQ
Trigger: TTGGGGCTGCACAGTGGAGCAGGTGGGTTCCCGTGT...AGGGCTCCCACAGCTGGTTCCCAGGCCAGTGAGTGCTGTGAGAATACAGTAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CCA 90 bp GCACTCCCTTCCACACTGCAGCACTGCGGGAACCGAGACAATGCCATCGCAGAGAGCCTCTGGCTCCGGTaGCAAAGGCCCAATAACATC +
Preference number: 4 (lower is better)
Translates to: ALPSTLQHCGNRDNAIAESLWLR*QRPNNI
Trigger: GATGTTATTGGGCCTTTGCCACCGGAGCCAGAGGCT...CTCTGCGATGGCATTGTCTCGGTTCCCGCAGTGCTGCAGTGTGGAAGGGAGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR TCA 90 bp CCCACCCCCAACCCTCTCCTTATTACTAATGACACGGGAACCCACCTGCTCCACCCAACGAGGAGGCCGTaGCGTCCAAAGGCTTTTTCC +
Preference number: 4 (lower is better)
Translates to: PTPNPLLITNDTGTHLLHPTRRP*RPKAFS
Trigger: GGAAAAAGCCTTTGGACGTCACGGCCTCCTCGTTGG...GTGGAGCAGGTGGGTTCCCGTGTCATTAGTAATAAGGAGAGGGTTGGGGGTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR TCA 90 bp CCCACCCCCAACCCTCTCCTTATTACTAATGACACGGGAACCCACCTGCTCCACCTCAGCCCGGAGATCTaGCTGCCTCTTCGACCAGTA +
Preference number: 4 (lower is better)
Translates to: PTPNPLLITNDTGTHLLHLSPEI*LPLRPV
Trigger: TACTGGTCGAAGAGGCAGTCAGATCTCCGGGCTGAG...GTGGAGCAGGTGGGTTCCCGTGTCATTAGTAATAAGGAGAGGGTTGGGGGTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR TCA 90 bp CCACACTCCAGTGTGTCATCTGTAATGAGGATGGGGCACTCCCTTCCACACTGCAGGCACATCAGTCTCTaGCCAGGTCCAGCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: PHSSVSSVMRMGHSLPHCRHISL*PGPAAS
Trigger: GGAGGCTGCTGGACCTGGTCAGAGACTGATGTGCCT...GCAGTGTGGAAGGGAGTGCCCCATCCTCATTACAGATGACACACTGGAGTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR GCA 90 bp TGCTACTGTATTCTCACAGCACTCACTGGCCTGGGAACCAGCTGTGGGAGCCCTCCATCGCAGAGGACCTaGAGGGGACAGGCTACTTCA +
Preference number: 4 (lower is better)
Translates to: CYCILTALTGLGTSCGSPPSQRT*RGQATS
Trigger: TGAAGTAGCCTGTCCCCTGCAGGTCCTCTGCGATGG...AGGGCTCCCACAGCTGGTTCCCAGGCCAGTGAGTGCTGTGAGAATACAGTAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR GCA 90 bp CCCACCCCCAACCCTCTCCTTATTACTAATGACACGGGAACCCACCTGCTCCACCGGGAACCGAGACAATaGCATCGCAGAGGACCTGCA +
Preference number: 4 (lower is better)
Translates to: PTPNPLLITNDTGTHLLHREPRQ*HRRGPA
Trigger: TGCAGGTCCTCTGCGATGGCATTGTCTCGGTTCCCG...GTGGAGCAGGTGGGTTCCCGTGTCATTAGTAATAAGGAGAGGGTTGGGGGTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR GCA 90 bp CCCACCCCCAACCCTCTCCTTATTACTAATGACACGGGAACCCACCTGCTCCACTCCACACTGCAGCACTaGGGGAACCGAGACAATGCC +
Preference number: 4 (lower is better)
Translates to: PTPNPLLITNDTGTHLLHSTLQH*GNRDNA
Trigger: GGCATTGTCTCGGTTCCCGCAGTGCTGCAGTGTGGA...GTGGAGCAGGTGGGTTCCCGTGTCATTAGTAATAAGGAGAGGGTTGGGGGTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR GCA 90 bp CCACACTCCAGTGTGTCATCTGTAATGAGGATGGGGCACTCCCTTCCACACTGCCACTCCCTTCCACACTaGAGCACTGCGGGAACCGAG +
Preference number: 4 (lower is better)
Translates to: PHSSVSSVMRMGHSLPHCHSLPH*STAGTE
Trigger: CTCGGTTCCCGCAGTGCTGCAGTGTGGAAGGGAGTG...GCAGTGTGGAAGGGAGTGCCCCATCCTCATTACAGATGACACACTGGAGTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CCA 90 bp TGCTACTGTATTCTCACAGCACTCACTGGCCTGGGAACCAGCTGTGGGAGCCCTTCTTCACTGGGGTCTTaGGGAGGAGGGATCTCTCCC +
Preference number: 4 (lower is better)
Translates to: CYCILTALTGLGTSCGSPSSLGS*GGGISP
Trigger: GGGAGAGATCCCTCCTCCCCAAGACCCCAGTGAAGA...AGGGCTCCCACAGCTGGTTCCCAGGCCAGTGAGTGCTGTGAGAATACAGTAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303688.8
ENST00000383794.7
CDS-3UTR CCA 90 bp CTTGACAGGGAGAAATTCCTCGTGACCTATGGTCCATCGGCTGATCTGGAAGCTAGCAGGACGTGGGGTTaGCACAGCCTCTGGCTCCGG +
Preference number: 4 (lower is better)
Translates to: LDREKFLVTYGPSADLEASRTWG*HSLWLR
Trigger: CCGGAGCCAGAGGCTGTGCCAACCCCACGTCCTGCT...AGCTTCCAGATCAGCCGATGGACCATAGGTCACGAGGAATTTCTCCCTGTCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CCA 90 bp GAGGATGGGGCACTCCCTTCCACACTGCAGCACTGCGGGAACCGAGACAATGCCCCACTTCTACCTTTCTaGACTACGAAGAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: EDGALPSTLQHCGNRDNAPLLPF*TTKSSS
Trigger: GGAGGAGCTCTTCGTAGTCCAGAAAGGTAGAAGTGG...GGCATTGTCTCGGTTCCCGCAGTGCTGCAGTGTGGAAGGGAGTGCCCCATCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CCA 90 bp TGCTACTGTATTCTCACAGCACTCACTGGCCTGGGAACCAGCTGTGGGAGCCCTGCTGTGGGAGCCCTATaGGCCTGGTCATCAACTCTC +
Preference number: 4 (lower is better)
Translates to: CYCILTALTGLGTSCGSPAVGAL*AWSSTL
Trigger: GAGAGTTGATGACCAGGCCCATAGGGCTCCCACAGC...AGGGCTCCCACAGCTGGTTCCCAGGCCAGTGAGTGCTGTGAGAATACAGTAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CCA 90 bp ACCCTGCACAAGTCATCGACCCCTCCACACTCCAGTGTGTCATCTGTAATGAGGCAGCACTCACTGGCCTaGGAACCAGCTGTGGGAGCC +
Preference number: 4 (lower is better)
Translates to: TLHKSSTPPHSSVSSVMRQHSLA*EPAVGA
Trigger: GGCTCCCACAGCTGGTTCCCAGGCCAGTGAGTGCTG...CCTCATTACAGATGACACACTGGAGTGTGGAGGGGTCGATGACTTGTGCAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CCA 90 bp TGCTACTGTATTCTCACAGCACTCACTGGCCTGGGAACCAGCTGTGGGAGCCCTTCTCACAGCACTCACTaGCCTGGGAACCAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: CYCILTALTGLGTSCGSPSHSTH*PGNQLW
Trigger: CCACAGCTGGTTCCCAGGCCAGTGAGTGCTGTGAGA...AGGGCTCCCACAGCTGGTTCCCAGGCCAGTGAGTGCTGTGAGAATACAGTAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR TCA 90 bp CCCACCCCCAACCCTCTCCTTATTACTAATGACACGGGAACCCACCTGCTCCACGGGAGAAATTCCTCGTaGCCTATGGTCCATCGGCTG +
Preference number: 4 (lower is better)
Translates to: PTPNPLLITNDTGTHLLHGRNSS*PMVHRL
Trigger: CAGCCGATGGACCATAGGTCACGAGGAATTTCTCCC...GTGGAGCAGGTGGGTTCCCGTGTCATTAGTAATAAGGAGAGGGTTGGGGGTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR TCA 90 bp GAGGATGGGGCACTCCCTTCCACACTGCAGCACTGCGGGAACCGAGACAATGCCTCAACACACATTTACTaGATGCCCACTGCACACAGG +
Preference number: 4 (lower is better)
Translates to: EDGALPSTLQHCGNRDNASTHIY*MPTAHR
Trigger: CCTGTGTGCAGTGGGCATTCAGTAAATGTGTGTTGA...GGCATTGTCTCGGTTCCCGCAGTGCTGCAGTGTGGAAGGGAGTGCCCCATCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR TCA 90 bp ACCCTGCACAAGTCATCGACCCCTCCACACTCCAGTGTGTCATCTGTAATGAGGAGGCACATCAGTCTCTaGCCAGGTCCAGCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: TLHKSSTPPHSSVSSVMRRHISL*PGPAAS
Trigger: GGAGGCTGCTGGACCTGGTCAGAGACTGATGTGCCT...CCTCATTACAGATGACACACTGGAGTGTGGAGGGGTCGATGACTTGTGCAGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR TCA 90 bp CTTCAGAGAACAAGGACTTGTGCTACTGTATTCTCACAGCACTCACTGGCCTGGGCCCAGGCACACTGCTaGCTTTCTGGAGCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: LQRTRTCATVFSQHSLAWAQAHC*LSGALP
Trigger: GGGCAGGGCTCCAGAAAGTCAGCAGTGTGCCTGGGC...CCAGGCCAGTGAGTGCTGTGAGAATACAGTAGCACAAGTCCTTGTTCTCTGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR GCA 90 bp GAGGATGGGGCACTCCCTTCCACACTGCAGCACTGCGGGAACCGAGACAATGCCCACACATTTACTGAATaGCCACTGCACACAGGAGTG +
Preference number: 4 (lower is better)
Translates to: EDGALPSTLQHCGNRDNAHTFTE*PLHTGV
Trigger: CACTCCTGTGTGCAGTGGGCATTCAGTAAATGTGTG...GGCATTGTCTCGGTTCCCGCAGTGCTGCAGTGTGGAAGGGAGTGCCCCATCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR GCA 90 bp TCCTTGCTGACAAATCCAACCCGAAGTCTGTGCCTCCTAGGGAAAGGACAGGACACACGGGAACCCACCTaGTCCACTGTGCAGCCCCAA +
Preference number: 4 (lower is better)
Translates to: SLLTNPTRSLCLLGKGQDTREPT*STVQPQ
Trigger: TTGGGGCTGCACAGTGGAGCAGGTGGGTTCCCGTGT...GTCCTGTCCTTTCCCTAGGAGGCACAGACTTCGGGTTGGATTTGTCAGCAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR GCA 90 bp TCCTTGCTGACAAATCCAACCCGAAGTCTGTGCCTCCTAGGGAAAGGACAGGACAGAGGATGGGGTGGGTaGCCAGGCACACTGCTGACT +
Preference number: 4 (lower is better)
Translates to: SLLTNPTRSLCLLGKGQDRGWGG*PGTLLT
Trigger: AGTCAGCAGTGTGCCTGGGCACCCACCCCATCCTCT...GTCCTGTCCTTTCCCTAGGAGGCACAGACTTCGGGTTGGATTTGTCAGCAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CCA 90 bp CTTGACAGGGAGAAATTCCTCGTGACCTATGGTCCATCGGCTGATCTGGAAGCTTACGGTCCATGGTCGTaGCAGAGGGTCCCGGTCCAG +
Preference number: 4 (lower is better)
Translates to: LDREKFLVTYGPSADLEAYGPWS*QRVPVQ
Trigger: CTGGACCGGGACCCTCTGCCACGACCATGGACCGTA...AGCTTCCAGATCAGCCGATGGACCATAGGTCACGAGGAATTTCTCCCTGTCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CCA 90 bp TCCTTGCTGACAAATCCAACCCGAAGTCTGTGCCTCCTAGGGAAAGGACAGGACAATGTACGGGCCCCATaGGCCTCTTCAGGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: SLLTNPTRSLCLLGKGQDNVRAP*ASSGPL
Trigger: GAGAGGCCCTGAAGAGGCCCATGGGGCCCGTACATT...GTCCTGTCCTTTCCCTAGGAGGCACAGACTTCGGGTTGGATTTGTCAGCAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CCA 90 bp TCCTTGCTGACAAATCCAACCCGAAGTCTGTGCCTCCTAGGGAAAGGACAGGACCCACTCCCGGATGTGTaGCACTCCAGGCTTGGTGTC +
Preference number: 4 (lower is better)
Translates to: SLLTNPTRSLCLLGKGQDPLPDV*HSRLGV
Trigger: GACACCAAGCCTGGAGTGCCACACATCCGGGAGTGG...GTCCTGTCCTTTCCCTAGGAGGCACAGACTTCGGGTTGGATTTGTCAGCAAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CCA 90 bp CCTGAATGTGAGGAAGCCGAGCATGGGGGCGACAGGGAGGTGGGATGCACTGAACCACTTCTACCTTTCTaGACTACGAAGAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: PECEEAEHGGDREVGCTEPLLPF*TTKSSS
Trigger: GGAGGAGCTCTTCGTAGTCCAGAAAGGTAGAAGTGG...TTCAGTGCATCCCACCTCCCTGTCGCCCCCATGCTCGGCTTCCTCACATTCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CCA 90 bp CCCACCCCCAACCCTCTCCTTATTACTAATGACACGGGAACCCACCTGCTCCACGGAGCCCTATGGGCCTaGTCATCAACTCTCAACTGC +
Preference number: 4 (lower is better)
Translates to: PTPNPLLITNDTGTHLLHGALWA*SSTLNC
Trigger: GCAGTTGAGAGTTGATGACCAGGCCCATAGGGCTCC...GTGGAGCAGGTGGGTTCCCGTGTCATTAGTAATAAGGAGAGGGTTGGGGGTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR TCA 90 bp CCTGAATGTGAGGAAGCCGAGCATGGGGGCGACAGGGAGGTGGGATGCACTGAATCAACACACATTTACTaGATGCCCACTGCACACAGG +
Preference number: 4 (lower is better)
Translates to: PECEEAEHGGDREVGCTESTHIY*MPTAHR
Trigger: CCTGTGTGCAGTGGGCATTCAGTAAATGTGTGTTGA...TTCAGTGCATCCCACCTCCCTGTCGCCCCCATGCTCGGCTTCCTCACATTCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR TCA 90 bp GCACTCCCTTCCACACTGCAGCACTGCGGGAACCGAGACAATGCCATCGCAGAGTCAACACACATTTACTaGATGCCCACTGCACACAGG +
Preference number: 4 (lower is better)
Translates to: ALPSTLQHCGNRDNAIAESTHIY*MPTAHR
Trigger: CCTGTGTGCAGTGGGCATTCAGTAAATGTGTGTTGA...CTCTGCGATGGCATTGTCTCGGTTCCCGCAGTGCTGCAGTGTGGAAGGGAGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR GCA 90 bp CCTGAATGTGAGGAAGCCGAGCATGGGGGCGACAGGGAGGTGGGATGCACTGAATCTATGGGCACCAGATaGCTCCATTTCTTTGCGCTT +
Preference number: 4 (lower is better)
Translates to: PECEEAEHGGDREVGCTESMGTR*LHFFAL
Trigger: AAGCGCAAAGAAATGGAGGCATCTGGTGCCCATAGA...TTCAGTGCATCCCACCTCCCTGTCGCCCCCATGCTCGGCTTCCTCACATTCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CCA 90 bp ACCCTGCACAAGTCATCGACCCCTCCACACTCCAGTGTGTCATCTGTAATGAGGTTTTCCTACGGTCCATaGTCGTGGCAGAGGGTCCCG +
Preference number: 4 (lower is better)
Translates to: TLHKSSTPPHSSVSSVMRFSYGP*SWQRVP
Trigger: CGGGACCCTCTGCCACGACCATGGACCGTAGGAAAA...CCTCATTACAGATGACACACTGGAGTGTGGAGGGGTCGATGACTTGTGCAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CCA 90 bp TCCTATGTGATTACTTCCGGGTCCTCTTGGAGAACAGAGCATTTTGCCTCCCATCTGGGCAGCAGGACGTaGGGTTGGCACAGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: SYVITSGSSWRTEHFASHLGSRT*GWHSLW
Trigger: CCAGAGGCTGTGCCAACCCCACGTCCTGCTGCCCAG...ATGGGAGGCAAAATGCTCTGTTCTCCAAGAGGACCCGGAAGTAATCACATAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CCA 90 bp GAGGATGGGGCACTCCCTTCCACACTGCAGCACTGCGGGAACCGAGACAATGCCACGAAGAGCTCCTCCTaGTCTTCCTTATCATTTCCT +
Preference number: 4 (lower is better)
Translates to: EDGALPSTLQHCGNRDNATKSSS*SSLSFP
Trigger: AGGAAATGATAAGGAAGACCAGGAGGAGCTCTTCGT...GGCATTGTCTCGGTTCCCGCAGTGCTGCAGTGTGGAAGGGAGTGCCCCATCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CCA 90 bp TCCTTGCTGACAAATCCAACCCGAAGTCTGTGCCTCCTAGGGAAAGGACAGGACGCTGTGGGAGCCCTATaGGCCTGGTCATCAACTCTC +
Preference number: 4 (lower is better)
Translates to: SLLTNPTRSLCLLGKGQDAVGAL*AWSSTL
Trigger: GAGAGTTGATGACCAGGCCCATAGGGCTCCCACAGC...GTCCTGTCCTTTCCCTAGGAGGCACAGACTTCGGGTTGGATTTGTCAGCAAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CCA 90 bp CTTCAGAGAACAAGGACTTGTGCTACTGTATTCTCACAGCACTCACTGGCCTGGCAGCACTCACTGGCCTaGGAACCAGCTGTGGGAGCC +
Preference number: 4 (lower is better)
Translates to: LQRTRTCATVFSQHSLAWQHSLA*EPAVGA
Trigger: GGCTCCCACAGCTGGTTCCCAGGCCAGTGAGTGCTG...CCAGGCCAGTGAGTGCTGTGAGAATACAGTAGCACAAGTCCTTGTTCTCTGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR TCA 90 bp GAGGATGGGGCACTCCCTTCCACACTGCAGCACTGCGGGAACCGAGACAATGCCCTTCTCAGCTCGATTTaGAACGCCTACATTCTGTTT +
Preference number: 4 (lower is better)
Translates to: EDGALPSTLQHCGNRDNALLSSI*NAYILF
Trigger: AAACAGAATGTAGGCGTTTCAAATCGAGCTGAGAAG...GGCATTGTCTCGGTTCCCGCAGTGCTGCAGTGTGGAAGGGAGTGCCCCATCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR TCA 90 bp CTTGACAGGGAGAAATTCCTCGTGACCTATGGTCCATCGGCTGATCTGGAAGCTCTCAGCCCGGAGATCTaGCTGCCTCTTCGACCAGTA +
Preference number: 4 (lower is better)
Translates to: LDREKFLVTYGPSADLEALSPEI*LPLRPV
Trigger: TACTGGTCGAAGAGGCAGTCAGATCTCCGGGCTGAG...AGCTTCCAGATCAGCCGATGGACCATAGGTCACGAGGAATTTCTCCCTGTCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR TCA 90 bp CATTTCCTATGTGATTACTTCCGGGTCCTCTTGGAGAACAGAGCATTTTGCCTCGCCCAGGCACACTGCTaGCTTTCTGGAGCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: HFLCDYFRVLLENRAFCLAQAHC*LSGALP
Trigger: GGGCAGGGCTCCAGAAAGTCAGCAGTGTGCCTGGGC...GAGGCAAAATGCTCTGTTCTCCAAGAGGACCCGGAAGTAATCACATAGGAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR GCA 90 bp CCCACCCCCAACCCTCTCCTTATTACTAATGACACGGGAACCCACCTGCTCCACTCTCAACTGCTTGTGTaGAGCTGTAGGAACCCTCTG +
Preference number: 4 (lower is better)
Translates to: PTPNPLLITNDTGTHLLHSQLLV*SCRNPL
Trigger: CAGAGGGTTCCTACAGCTGCACACAAGCAGTTGAGA...GTGGAGCAGGTGGGTTCCCGTGTCATTAGTAATAAGGAGAGGGTTGGGGGTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR GCA 90 bp CTTGACAGGGAGAAATTCCTCGTGACCTATGGTCCATCGGCTGATCTGGAAGCTTCCACACTGCAGCACTaGGGGAACCGAGACAATGCC +
Preference number: 4 (lower is better)
Translates to: LDREKFLVTYGPSADLEASTLQH*GNRDNA
Trigger: GGCATTGTCTCGGTTCCCGCAGTGCTGCAGTGTGGA...AGCTTCCAGATCAGCCGATGGACCATAGGTCACGAGGAATTTCTCCCTGTCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CCA 90 bp ACCCTGCACAAGTCATCGACCCCTCCACACTCCAGTGTGTCATCTGTAATGAGGAGCCTCTGGCTCCGGTaGCAAAGGCCCAATAACATC +
Preference number: 4 (lower is better)
Translates to: TLHKSSTPPHSSVSSVMRSLWLR*QRPNNI
Trigger: GATGTTATTGGGCCTTTGCCACCGGAGCCAGAGGCT...CCTCATTACAGATGACACACTGGAGTGTGGAGGGGTCGATGACTTGTGCAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CCA 90 bp GTTATTTCTCCCTCTGGGAGAGAAAGGCACTGTCAAAGTACAAACCCAAGTCAGGGTTGGCACAGCCTCTaGCTCCGGTGGCAAAGGCCC +
Preference number: 4 (lower is better)
Translates to: VISPSGRERHCQSTNPSQGWHSL*LRWQRP
Trigger: GGGCCTTTGCCACCGGAGCCAGAGGCTGTGCCAACC...CTGACTTGGGTTTGTACTTTGACAGTGCCTTTCTCTCCCAGAGGGAGAAATAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CCA 90 bp TTATTTCTCCCTCTGGGAGAGAAAGGCACTGTCAAAGTACAAACCCAAGTCAGCGGTTGGCACAGCCTCTaGCTCCGGTGGCAAAGGCCC +
Preference number: 4 (lower is better)
Translates to: LFLPLGEKGTVKVQTQVSGWHSL*LRWQRP
Trigger: GGGCCTTTGCCACCGGAGCCAGAGGCTGTGCCAACC...GCTGACTTGGGTTTGTACTTTGACAGTGCCTTTCTCTCCCAGAGGGAGAAATAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CCA 90 bp GCACTCCCTTCCACACTGCAGCACTGCGGGAACCGAGACAATGCCATCGCAGAGTGGAAGCTGAACCCTTaGAATAAAGACACCTGCATG +
Preference number: 4 (lower is better)
Translates to: ALPSTLQHCGNRDNAIAEWKLNP*NKDTCM
Trigger: CATGCAGGTGTCTTTATTCCAAGGGTTCAGCTTCCA...CTCTGCGATGGCATTGTCTCGGTTCCCGCAGTGCTGCAGTGTGGAAGGGAGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CCA 90 bp CTTGACAGGGAGAAATTCCTCGTGACCTATGGTCCATCGGCTGATCTGGAAGCTGGGGCGACAGGGAGGTaGGATGCACTGAAAAGCTCT +
Preference number: 4 (lower is better)
Translates to: LDREKFLVTYGPSADLEAGATGR*DALKSS
Trigger: AGAGCTTTTCAGTGCATCCCACCTCCCTGTCGCCCC...AGCTTCCAGATCAGCCGATGGACCATAGGTCACGAGGAATTTCTCCCTGTCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CCA 90 bp CTTGACAGGGAGAAATTCCTCGTGACCTATGGTCCATCGGCTGATCTGGAAGCTTCTCACAGCACTCACTaGCCTGGGAACCAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: LDREKFLVTYGPSADLEASHSTH*PGNQLW
Trigger: CCACAGCTGGTTCCCAGGCCAGTGAGTGCTGTGAGA...AGCTTCCAGATCAGCCGATGGACCATAGGTCACGAGGAATTTCTCCCTGTCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR TCA 90 bp GTTATTTCTCCCTCTGGGAGAGAAAGGCACTGTCAAAGTACAAACCCAAGTCAGGGGGGCAGGAGTGGGTaGCGTATGTTCAGGGCTAGG +
Preference number: 4 (lower is better)
Translates to: VISPSGRERHCQSTNPSQGGRSG*RMFRAR
Trigger: CCTAGCCCTGAACATACGTCACCCACTCCTGCCCCC...CTGACTTGGGTTTGTACTTTGACAGTGCCTTTCTCTCCCAGAGGGAGAAATAAC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR TCA 90 bp TGCTACTGTATTCTCACAGCACTCACTGGCCTGGGAACCAGCTGTGGGAGCCCTCAGTTTTCCACTGCTTaGCAGGGAGAAATTCCTCGT +
Preference number: 4 (lower is better)
Translates to: CYCILTALTGLGTSCGSPQFSTA*QGEIPR
Trigger: ACGAGGAATTTCTCCCTGTCAAGCAGTGGAAAACTG...AGGGCTCCCACAGCTGGTTCCCAGGCCAGTGAGTGCTGTGAGAATACAGTAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR GCA 90 bp CCCACCCCCAACCCTCTCCTTATTACTAATGACACGGGAACCCACCTGCTCCACTCTATGGGCACCAGATaGCTCCATTTCTTTGCGCTT +
Preference number: 4 (lower is better)
Translates to: PTPNPLLITNDTGTHLLHSMGTR*LHFFAL
Trigger: AAGCGCAAAGAAATGGAGGCATCTGGTGCCCATAGA...GTGGAGCAGGTGGGTTCCCGTGTCATTAGTAATAAGGAGAGGGTTGGGGGTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR GCA 90 bp CTTGACAGGGAGAAATTCCTCGTGACCTATGGTCCATCGGCTGATCTGGAAGCTGCCCGGAGATCTGACTaGCTCTTCGACCAGTATCCA +
Preference number: 4 (lower is better)
Translates to: LDREKFLVTYGPSADLEAARRSD*LFDQYP
Trigger: TGGATACTGGTCGAAGAGGCAGTCAGATCTCCGGGC...AGCTTCCAGATCAGCCGATGGACCATAGGTCACGAGGAATTTCTCCCTGTCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR GCA 90 bp CTTGACAGGGAGAAATTCCTCGTGACCTATGGTCCATCGGCTGATCTGGAAGCTCCAACCCGAAGTCTGTaGCTCCTAGGGAAAGGACAG +
Preference number: 4 (lower is better)
Translates to: LDREKFLVTYGPSADLEAPTRSL*LLGKGQ
Trigger: CTGTCCTTTCCCTAGGAGGCACAGACTTCGGGTTGG...AGCTTCCAGATCAGCCGATGGACCATAGGTCACGAGGAATTTCTCCCTGTCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CCA 90 bp CCTGGTCTTCCTTATCATTTCCTATGTGATTACTTCCGGGTCCTCTTGGAGAACTACGGTCCATGGTCGTaGCAGAGGGTCCCGGTCCAG +
Preference number: 4 (lower is better)
Translates to: PGLPYHFLCDYFRVLLENYGPWS*QRVPVQ
Trigger: CTGGACCGGGACCCTCTGCCACGACCATGGACCGTA...GTTCTCCAAGAGGACCCGGAAGTAATCACATAGGAAATGATAAGGAAGACCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CCA 90 bp CATTTCCTATGTGATTACTTCCGGGTCCTCTTGGAGAACAGAGCATTTTGCCTCTACGGTCCATGGTCGTaGCAGAGGGTCCCGGTCCAG +
Preference number: 4 (lower is better)
Translates to: HFLCDYFRVLLENRAFCLYGPWS*QRVPVQ
Trigger: CTGGACCGGGACCCTCTGCCACGACCATGGACCGTA...GAGGCAAAATGCTCTGTTCTCCAAGAGGACCCGGAAGTAATCACATAGGAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CCA 90 bp CCTAAAGTTATTTCTCCCTCTGGGAGAGAAAGGCACTGTCAAAGTACAAACCCAGGTTGGCACAGCCTCTaGCTCCGGTGGCAAAGGCCC +
Preference number: 4 (lower is better)
Translates to: PKVISPSGRERHCQSTNPGWHSL*LRWQRP
Trigger: GGGCCTTTGCCACCGGAGCCAGAGGCTGTGCCAACC...TGGGTTTGTACTTTGACAGTGCCTTTCTCTCCCAGAGGGAGAAATAACTTTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CCA 90 bp CCTAAAGTTATTTCTCCCTCTGGGAGAGAAAGGCACTGTCAAAGTACAAACCCACTGGGCAGCAGGACGTaGGGTTGGCACAGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: PKVISPSGRERHCQSTNPLGSRT*GWHSLW
Trigger: CCAGAGGCTGTGCCAACCCCACGTCCTGCTGCCCAG...TGGGTTTGTACTTTGACAGTGCCTTTCTCTCCCAGAGGGAGAAATAACTTTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CCA 90 bp TCCTTGCTGACAAATCCAACCCGAAGTCTGTGCCTCCTAGGGAAAGGACAGGACTCTACTTTGCTACTCTaGGCAGCAGGACGTGGGGTT +
Preference number: 4 (lower is better)
Translates to: SLLTNPTRSLCLLGKGQDSTLLL*AAGRGV
Trigger: AACCCCACGTCCTGCTGCCCAGAGTAGCAAAGTAGA...GTCCTGTCCTTTCCCTAGGAGGCACAGACTTCGGGTTGGATTTGTCAGCAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CCA 90 bp CTTCAGAGAACAAGGACTTGTGCTACTGTATTCTCACAGCACTCACTGGCCTGGACACTGCTGACTTTCTaGAGCCCTGCCCACCCCCAA +
Preference number: 4 (lower is better)
Translates to: LQRTRTCATVFSQHSLAWTLLTF*SPAHPQ
Trigger: TTGGGGGTGGGCAGGGCTCCAGAAAGTCAGCAGTGT...CCAGGCCAGTGAGTGCTGTGAGAATACAGTAGCACAAGTCCTTGTTCTCTGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CCA 90 bp CATTTCCTATGTGATTACTTCCGGGTCCTCTTGGAGAACAGAGCATTTTGCCTCCCTGGGAACCAGCTGTaGGAGCCCTATGGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: HFLCDYFRVLLENRAFCLPGNQL*EPYGPG
Trigger: ACCAGGCCCATAGGGCTCCCACAGCTGGTTCCCAGG...GAGGCAAAATGCTCTGTTCTCCAAGAGGACCCGGAAGTAATCACATAGGAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CCA 90 bp CTTCAGAGAACAAGGACTTGTGCTACTGTATTCTCACAGCACTCACTGGCCTGGACTAACCTGGGGTCTTaGGGAGGAGGGATCTCTCCC +
Preference number: 4 (lower is better)
Translates to: LQRTRTCATVFSQHSLAWTNLGS*GGGISP
Trigger: GGGAGAGATCCCTCCTCCCCAAGACCCCAGGTTAGT...CCAGGCCAGTGAGTGCTGTGAGAATACAGTAGCACAAGTCCTTGTTCTCTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611584.4
CDS-3UTR TCA 90 bp TTCTATCGCAGCTCACATGTAAATCCAGGTAGGTATGTCCCTATCCCACTTAGAGGGGGCAGGAGTGGGTaGCGTATGTTCAGGGCTAGG +
Preference number: 4 (lower is better)
Translates to: FYRSSHVNPGRYVPIPLRGGRSG*RMFRAR
Trigger: CCTAGCCCTGAACATACGTCACCCACTCCTGCCCCC...TCTAAGTGGGATAGGGACATACCTACCTGGATTTACATGTGAGCTGCGATAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR TCA 90 bp GTTATTTCTCCCTCTGGGAGAGAAAGGCACTGTCAAAGTACAAACCCAAGTCAGAGGCACATCAGTCTCTaGCCAGGTCCAGCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: VISPSGRERHCQSTNPSQRHISL*PGPAAS
Trigger: GGAGGCTGCTGGACCTGGTCAGAGACTGATGTGCCT...CTGACTTGGGTTTGTACTTTGACAGTGCCTTTCTCTCCCAGAGGGAGAAATAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR GCA 90 bp GCACTCCCTTCCACACTGCAGCACTGCGGGAACCGAGACAATGCCATCGCAGAGCTGCATGCTCGGATTTaGAAAAGGAATGGAAAAGAA +
Preference number: 4 (lower is better)
Translates to: ALPSTLQHCGNRDNAIAELHARI*KRNGKE
Trigger: TTCTTTTCCATTCCTTTTGCAAATCCGAGCATGCAG...CTCTGCGATGGCATTGTCTCGGTTCCCGCAGTGCTGCAGTGTGGAAGGGAGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR GCA 90 bp CCTGAATGTGAGGAAGCCGAGCATGGGGGCGACAGGGAGGTGGGATGCACTGAAATAAAGACACCTGCATaGTCGGATTTGCAAAAGGAA +
Preference number: 4 (lower is better)
Translates to: PECEEAEHGGDREVGCTEIKTPA*SDLQKE
Trigger: TTCCTTTTGCAAATCCGAGCATGCAGGTGTCTTTAT...TTCAGTGCATCCCACCTCCCTGTCGCCCCCATGCTCGGCTTCCTCACATTCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR GCA 90 bp TGCTACTGTATTCTCACAGCACTCACTGGCCTGGGAACCAGCTGTGGGAGCCCTCATGCAGTTTTCCACTaGTTGACAGGGAGAAATTCC +
Preference number: 4 (lower is better)
Translates to: CYCILTALTGLGTSCGSPHAVFH*LTGRNS
Trigger: GGAATTTCTCCCTGTCAAGCAGTGGAAAACTGCATG...AGGGCTCCCACAGCTGGTTCCCAGGCCAGTGAGTGCTGTGAGAATACAGTAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR GCA 90 bp CCACACTCCAGTGTGTCATCTGTAATGAGGATGGGGCACTCCCTTCCACACTGCGCATTTTGCCTCCCATaGAGTTTTCCACTGCTTGAC +
Preference number: 4 (lower is better)
Translates to: PHSSVSSVMRMGHSLPHCAFCLP*SFPLLD
Trigger: GTCAAGCAGTGGAAAACTGCATGGGAGGCAAAATGC...GCAGTGTGGAAGGGAGTGCCCCATCCTCATTACAGATGACACACTGGAGTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR GCA 90 bp CATTTCCTATGTGATTACTTCCGGGTCCTCTTGGAGAACAGAGCATTTTGCCTCACACGGGAACCCACCTaGTCCACTGTGCAGCCCCAA +
Preference number: 4 (lower is better)
Translates to: HFLCDYFRVLLENRAFCLTREPT*STVQPQ
Trigger: TTGGGGCTGCACAGTGGAGCAGGTGGGTTCCCGTGT...GAGGCAAAATGCTCTGTTCTCCAAGAGGACCCGGAAGTAATCACATAGGAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR GCA 90 bp CATTTCCTATGTGATTACTTCCGGGTCCTCTTGGAGAACAGAGCATTTTGCCTCAGAGGATGGGGTGGGTaGCCAGGCACACTGCTGACT +
Preference number: 4 (lower is better)
Translates to: HFLCDYFRVLLENRAFCLRGWGG*PGTLLT
Trigger: AGTCAGCAGTGTGCCTGGGCACCCACCCCATCCTCT...GAGGCAAAATGCTCTGTTCTCCAAGAGGACCCGGAAGTAATCACATAGGAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR GCA 90 bp GTTATTTCTCCCTCTGGGAGAGAAAGGCACTGTCAAAGTACAAACCCAAGTCAGCACTCCCTTCCACACTaGAGCACTGCGGGAACCGAG +
Preference number: 4 (lower is better)
Translates to: VISPSGRERHCQSTNPSQHSLPH*STAGTE
Trigger: CTCGGTTCCCGCAGTGCTGCAGTGTGGAAGGGAGTG...CTGACTTGGGTTTGTACTTTGACAGTGCCTTTCTCTCCCAGAGGGAGAAATAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CCA 90 bp GTTATTTCTCCCTCTGGGAGAGAAAGGCACTGTCAAAGTACAAACCCAAGTCAGAATGTACGGGCCCCATaGGCCTCTTCAGGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: VISPSGRERHCQSTNPSQNVRAP*ASSGPL
Trigger: GAGAGGCCCTGAAGAGGCCCATGGGGCCCGTACATT...CTGACTTGGGTTTGTACTTTGACAGTGCCTTTCTCTCCCAGAGGGAGAAATAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CCA 90 bp CCACTTCTACCTTTCTGGACTACGAAGAGCTCCTCCTGGTCTTCCTTATCATTTCCACTCCCGGATGTGTaGCACTCCAGGCTTGGTGTC +
Preference number: 4 (lower is better)
Translates to: PLLPFWTTKSSSWSSLSFPLPDV*HSRLGV
Trigger: GACACCAAGCCTGGAGTGCCACACATCCGGGAGTGG...AAATGATAAGGAAGACCAGGAGGAGCTCTTCGTAGTCCAGAAAGGTAGAAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CCA 90 bp ACCCTGCACAAGTCATCGACCCCTCCACACTCCAGTGTGTCATCTGTAATGAGGCCACTTCTACCTTTCTaGACTACGAAGAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: TLHKSSTPPHSSVSSVMRPLLPF*TTKSSS
Trigger: GGAGGAGCTCTTCGTAGTCCAGAAAGGTAGAAGTGG...CCTCATTACAGATGACACACTGGAGTGTGGAGGGGTCGATGACTTGTGCAGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CCA 90 bp TCCCACTTCTACCTTTCTGGACTACGAAGAGCTCCTCCTGGTCTTCCTTATCATGGGGCGACAGGGAGGTaGGATGCACTGAAAAGCTCT +
Preference number: 4 (lower is better)
Translates to: SHFYLSGLRRAPPGLPYHGATGR*DALKSS
Trigger: AGAGCTTTTCAGTGCATCCCACCTCCCTGTCGCCCC...ATGATAAGGAAGACCAGGAGGAGCTCTTCGTAGTCCAGAAAGGTAGAAGTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CCA 90 bp TCCCACTTCTACCTTTCTGGACTACGAAGAGCTCCTCCTGGTCTTCCTTATCATGAACCCTCTGAGGTGTaGCAGGTAGAGGATGGGGTG +
Preference number: 4 (lower is better)
Translates to: SHFYLSGLRRAPPGLPYHEPSEV*QVEDGV
Trigger: CACCCCATCCTCTACCTGCCACACCTCAGAGGGTTC...ATGATAAGGAAGACCAGGAGGAGCTCTTCGTAGTCCAGAAAGGTAGAAGTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CCA 90 bp CCTAAAGTTATTTCTCCCTCTGGGAGAGAAAGGCACTGTCAAAGTACAAACCCACAGCACTCACTGGCCTaGGAACCAGCTGTGGGAGCC +
Preference number: 4 (lower is better)
Translates to: PKVISPSGRERHCQSTNPQHSLA*EPAVGA
Trigger: GGCTCCCACAGCTGGTTCCCAGGCCAGTGAGTGCTG...TGGGTTTGTACTTTGACAGTGCCTTTCTCTCCCAGAGGGAGAAATAACTTTAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR TCA 90 bp CCACACTCCAGTGTGTCATCTGTAATGAGGATGGGGCACTCCCTTCCACACTGCTCCCATTGCTGGCGCTaGAGTTCTTTTCTCATATCT +
Preference number: 4 (lower is better)
Translates to: PHSSVSSVMRMGHSLPHCSHCWR*SSFLIS
Trigger: AGATATGAGAAAAGAACTTCAGCGCCAGCAATGGGA...GCAGTGTGGAAGGGAGTGCCCCATCCTCATTACAGATGACACACTGGAGTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR TCA 90 bp CCTGGTCTTCCTTATCATTTCCTATGTGATTACTTCCGGGTCCTCTTGGAGAACGCTGTAGGAACCCTCTaGGGTGTGGCAGGTAGAGGA +
Preference number: 4 (lower is better)
Translates to: PGLPYHFLCDYFRVLLENAVGTL*GVAGRG
Trigger: TCCTCTACCTGCCACACCTCAGAGGGTTCCTACAGC...GTTCTCCAAGAGGACCCGGAAGTAATCACATAGGAAATGATAAGGAAGACCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR TCA 90 bp GTTATTTCTCCCTCTGGGAGAGAAAGGCACTGTCAAAGTACAAACCCAAGTCAGGCTGTAGGAACCCTCTaGGGTGTGGCAGGTAGAGGA +
Preference number: 4 (lower is better)
Translates to: VISPSGRERHCQSTNPSQAVGTL*GVAGRG
Trigger: TCCTCTACCTGCCACACCTCAGAGGGTTCCTACAGC...CTGACTTGGGTTTGTACTTTGACAGTGCCTTTCTCTCCCAGAGGGAGAAATAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR GCA 90 bp CTTGACAGGGAGAAATTCCTCGTGACCTATGGTCCATCGGCTGATCTGGAAGCTTCTCAACTGCTTGTGTaGAGCTGTAGGAACCCTCTG +
Preference number: 4 (lower is better)
Translates to: LDREKFLVTYGPSADLEASQLLV*SCRNPL
Trigger: CAGAGGGTTCCTACAGCTGCACACAAGCAGTTGAGA...AGCTTCCAGATCAGCCGATGGACCATAGGTCACGAGGAATTTCTCCCTGTCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR GCA 90 bp CATTTCCTATGTGATTACTTCCGGGTCCTCTTGGAGAACAGAGCATTTTGCCTCCCATCGCAGAGGACCTaGAGGGGACAGGCTACTTCA +
Preference number: 4 (lower is better)
Translates to: HFLCDYFRVLLENRAFCLPSQRT*RGQATS
Trigger: TGAAGTAGCCTGTCCCCTGCAGGTCCTCTGCGATGG...GAGGCAAAATGCTCTGTTCTCCAAGAGGACCCGGAAGTAATCACATAGGAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR GCA 90 bp CCACTTCTACCTTTCTGGACTACGAAGAGCTCCTCCTGGTCTTCCTTATCATTTCGGGAACCGAGACAATaGCATCGCAGAGGACCTGCA +
Preference number: 4 (lower is better)
Translates to: PLLPFWTTKSSSWSSLSFREPRQ*HRRGPA
Trigger: TGCAGGTCCTCTGCGATGGCATTGTCTCGGTTCCCG...AAATGATAAGGAAGACCAGGAGGAGCTCTTCGTAGTCCAGAAAGGTAGAAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR GCA 90 bp CCTGGTCTTCCTTATCATTTCCTATGTGATTACTTCCGGGTCCTCTTGGAGAACCGGGAACCGAGACAATaGCATCGCAGAGGACCTGCA +
Preference number: 4 (lower is better)
Translates to: PGLPYHFLCDYFRVLLENREPRQ*HRRGPA
Trigger: TGCAGGTCCTCTGCGATGGCATTGTCTCGGTTCCCG...GTTCTCCAAGAGGACCCGGAAGTAATCACATAGGAAATGATAAGGAAGACCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR GCA 90 bp TTATTTCTCCCTCTGGGAGAGAAAGGCACTGTCAAAGTACAAACCCAAGTCAGCTCCACACTGCAGCACTaGGGGAACCGAGACAATGCC +
Preference number: 4 (lower is better)
Translates to: LFLPLGEKGTVKVQTQVSSTLQH*GNRDNA
Trigger: GGCATTGTCTCGGTTCCCGCAGTGCTGCAGTGTGGA...GCTGACTTGGGTTTGTACTTTGACAGTGCCTTTCTCTCCCAGAGGGAGAAATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CCA 90 bp CCTGGTCTTCCTTATCATTTCCTATGTGATTACTTCCGGGTCCTCTTGGAGAACTTTTCCTACGGTCCATaGTCGTGGCAGAGGGTCCCG +
Preference number: 4 (lower is better)
Translates to: PGLPYHFLCDYFRVLLENFSYGP*SWQRVP
Trigger: CGGGACCCTCTGCCACGACCATGGACCGTAGGAAAA...GTTCTCCAAGAGGACCCGGAAGTAATCACATAGGAAATGATAAGGAAGACCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CCA 90 bp CCTGGTCTTCCTTATCATTTCCTATGTGATTACTTCCGGGTCCTCTTGGAGAACTCTTCACTGGGGTCTTaGGGAGGAGGGATCTCTCCC +
Preference number: 4 (lower is better)
Translates to: PGLPYHFLCDYFRVLLENSSLGS*GGGISP
Trigger: GGGAGAGATCCCTCCTCCCCAAGACCCCAGTGAAGA...GTTCTCCAAGAGGACCCGGAAGTAATCACATAGGAAATGATAAGGAAGACCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303688.8
ENST00000383794.7
CDS-3UTR CCA 90 bp CTTGACAGGGAGAAATTCCTCGTGACCTATGGTCCATCGGCTGATCTGGAAGCTGTCCATCGGCTGATCTaGAAGCTGAACCCTTGGAAT +
Preference number: 4 (lower is better)
Translates to: LDREKFLVTYGPSADLEAVHRLI*KLNPWN
Trigger: ATTCCAAGGGTTCAGCTTCCAGATCAGCCGATGGAC...AGCTTCCAGATCAGCCGATGGACCATAGGTCACGAGGAATTTCTCCCTGTCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CCA 90 bp CTTGACAGGGAGAAATTCCTCGTGACCTATGGTCCATCGGCTGATCTGGAAGCTACTTCCGGGTCCTCTTaGAGAACAGAGCATTTTGCC +
Preference number: 4 (lower is better)
Translates to: LDREKFLVTYGPSADLEATSGSS*RTEHFA
Trigger: GGCAAAATGCTCTGTTCTCCAAGAGGACCCGGAAGT...AGCTTCCAGATCAGCCGATGGACCATAGGTCACGAGGAATTTCTCCCTGTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CCA 90 bp GTTATTTCTCCCTCTGGGAGAGAAAGGCACTGTCAAAGTACAAACCCAAGTCAGGAACCCTCTGAGGTGTaGCAGGTAGAGGATGGGGTG +
Preference number: 4 (lower is better)
Translates to: VISPSGRERHCQSTNPSQEPSEV*QVEDGV
Trigger: CACCCCATCCTCTACCTGCCACACCTCAGAGGGTTC...CTGACTTGGGTTTGTACTTTGACAGTGCCTTTCTCTCCCAGAGGGAGAAATAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CCA 90 bp GTTATTTCTCCCTCTGGGAGAGAAAGGCACTGTCAAAGTACAAACCCAAGTCAGGCTGTGGGAGCCCTATaGGCCTGGTCATCAACTCTC +
Preference number: 4 (lower is better)
Translates to: VISPSGRERHCQSTNPSQAVGAL*AWSSTL
Trigger: GAGAGTTGATGACCAGGCCCATAGGGCTCCCACAGC...CTGACTTGGGTTTGTACTTTGACAGTGCCTTTCTCTCCCAGAGGGAGAAATAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CCA 90 bp CCACTTCTACCTTTCTGGACTACGAAGAGCTCCTCCTGGTCTTCCTTATCATTTTCTCACAGCACTCACTaGCCTGGGAACCAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: PLLPFWTTKSSSWSSLSFSHSTH*PGNQLW
Trigger: CCACAGCTGGTTCCCAGGCCAGTGAGTGCTGTGAGA...AAATGATAAGGAAGACCAGGAGGAGCTCTTCGTAGTCCAGAAAGGTAGAAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR TCA 90 bp CCTAAAGTTATTTCTCCCTCTGGGAGAGAAAGGCACTGTCAAAGTACAAACCCACCAACGAGGAGGCCGTaGCGTCCAAAGGCTTTTTCC +
Preference number: 4 (lower is better)
Translates to: PKVISPSGRERHCQSTNPPTRRP*RPKAFS
Trigger: GGAAAAAGCCTTTGGACGTCACGGCCTCCTCGTTGG...TGGGTTTGTACTTTGACAGTGCCTTTCTCTCCCAGAGGGAGAAATAACTTTAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR TCA 90 bp TTCTATCGCAGCTCACATGTAAATCCAGGTAGGTATGTCCCTATCCCACTTAGACCAACGAGGAGGCCGTaGCGTCCAAAGGCTTTTTCC +
Preference number: 4 (lower is better)
Translates to: FYRSSHVNPGRYVPIPLRPTRRP*RPKAFS
Trigger: GGAAAAAGCCTTTGGACGTCACGGCCTCCTCGTTGG...TCTAAGTGGGATAGGGACATACCTACCTGGATTTACATGTGAGCTGCGATAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR TCA 90 bp ACCCTGCACAAGTCATCGACCCCTCCACACTCCAGTGTGTCATCTGTAATGAGGTCCTCTCCTGGACAATaGCTTCTACTTTGCTACTCT +
Preference number: 4 (lower is better)
Translates to: TLHKSSTPPHSSVSSVMRSSPGQ*LLLCYS
Trigger: AGAGTAGCAAAGTAGAAGTCATTGTCCAGGAGAGGA...CCTCATTACAGATGACACACTGGAGTGTGGAGGGGTCGATGACTTGTGCAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR GCA 90 bp CCACACTCCAGTGTGTCATCTGTAATGAGGATGGGGCACTCCCTTCCACACTGCCGCCTACATTCTGTTTaGTCCAGATACTTGGTTTCT +
Preference number: 4 (lower is better)
Translates to: PHSSVSSVMRMGHSLPHCRLHSV*SRYLVS
Trigger: AGAAACCAAGTATCTGGAGCAAACAGAATGTAGGCG...GCAGTGTGGAAGGGAGTGCCCCATCCTCATTACAGATGACACACTGGAGTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR GCA 90 bp CCACTTCTACCTTTCTGGACTACGAAGAGCTCCTCCTGGTCTTCCTTATCATTTGCCCGGAGATCTGACTaGCTCTTCGACCAGTATCCA +
Preference number: 4 (lower is better)
Translates to: PLLPFWTTKSSSWSSLSFARRSD*LFDQYP
Trigger: TGGATACTGGTCGAAGAGGCAGTCAGATCTCCGGGC...AAATGATAAGGAAGACCAGGAGGAGCTCTTCGTAGTCCAGAAAGGTAGAAGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR GCA 90 bp CATTTCCTATGTGATTACTTCCGGGTCCTCTTGGAGAACAGAGCATTTTGCCTCGCCCGGAGATCTGACTaGCTCTTCGACCAGTATCCA +
Preference number: 4 (lower is better)
Translates to: HFLCDYFRVLLENRAFCLARRSD*LFDQYP
Trigger: TGGATACTGGTCGAAGAGGCAGTCAGATCTCCGGGC...GAGGCAAAATGCTCTGTTCTCCAAGAGGACCCGGAAGTAATCACATAGGAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR GCA 90 bp CCTAAAGTTATTTCTCCCTCTGGGAGAGAAAGGCACTGTCAAAGTACAAACCCACCATCGCAGAGGACCTaGAGGGGACAGGCTACTTCA +
Preference number: 4 (lower is better)
Translates to: PKVISPSGRERHCQSTNPPSQRT*RGQATS
Trigger: TGAAGTAGCCTGTCCCCTGCAGGTCCTCTGCGATGG...TGGGTTTGTACTTTGACAGTGCCTTTCTCTCCCAGAGGGAGAAATAACTTTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR GCA 90 bp TCCCACTTCTACCTTTCTGGACTACGAAGAGCTCCTCCTGGTCTTCCTTATCATTACCCAACACCAAGTTaGCGGGCCTCATTTTCCCGA +
Preference number: 4 (lower is better)
Translates to: SHFYLSGLRRAPPGLPYHYPTPS*RASFSR
Trigger: TCGGGAAAATGAGGCCCGGCAACTTGGTGTTGGGTA...ATGATAAGGAAGACCAGGAGGAGCTCTTCGTAGTCCAGAAAGGTAGAAGTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383794.7
CDS-3UTR CCA 90 bp CCTGGTCTTCCTTATCATTTCCTATGTGATTACTTCCGGGTCCTCTTGGAGAACAGCCTCTGGCTCCGGTaGCAAAGGCCCAATAACATC +
Preference number: 4 (lower is better)
Translates to: PGLPYHFLCDYFRVLLENSLWLR*QRPNNI
Trigger: GATGTTATTGGGCCTTTGCCACCGGAGCCAGAGGCT...GTTCTCCAAGAGGACCCGGAAGTAATCACATAGGAAATGATAAGGAAGACCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CCA 90 bp TTCTATCGCAGCTCACATGTAAATCCAGGTAGGTATGTCCCTATCCCACTTAGAACACTGCTGACTTTCTaGAGCCCTGCCCACCCCCAA +
Preference number: 4 (lower is better)
Translates to: FYRSSHVNPGRYVPIPLRTLLTF*SPAHPQ
Trigger: TTGGGGGTGGGCAGGGCTCCAGAAAGTCAGCAGTGT...TCTAAGTGGGATAGGGACATACCTACCTGGATTTACATGTGAGCTGCGATAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CCA 90 bp CCTAAAGTTATTTCTCCCTCTGGGAGAGAAAGGCACTGTCAAAGTACAAACCCAACACTGCTGACTTTCTaGAGCCCTGCCCACCCCCAA +
Preference number: 4 (lower is better)
Translates to: PKVISPSGRERHCQSTNPTLLTF*SPAHPQ
Trigger: TTGGGGGTGGGCAGGGCTCCAGAAAGTCAGCAGTGT...TGGGTTTGTACTTTGACAGTGCCTTTCTCTCCCAGAGGGAGAAATAACTTTAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CCA 90 bp TTATTTCTCCCTCTGGGAGAGAAAGGCACTGTCAAAGTACAAACCCAAGTCAGCGGAGCCCTATGGGCCTaGTCATCAACTCTCAACTGC +
Preference number: 4 (lower is better)
Translates to: LFLPLGEKGTVKVQTQVSGALWA*SSTLNC
Trigger: GCAGTTGAGAGTTGATGACCAGGCCCATAGGGCTCC...GCTGACTTGGGTTTGTACTTTGACAGTGCCTTTCTCTCCCAGAGGGAGAAATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR TCA 90 bp TCCTTGCTGACAAATCCAACCCGAAGTCTGTGCCTCCTAGGGAAAGGACAGGACCTTCTCAGCTCGATTTaGAACGCCTACATTCTGTTT +
Preference number: 4 (lower is better)
Translates to: SLLTNPTRSLCLLGKGQDLLSSI*NAYILF
Trigger: AAACAGAATGTAGGCGTTTCAAATCGAGCTGAGAAG...GTCCTGTCCTTTCCCTAGGAGGCACAGACTTCGGGTTGGATTTGTCAGCAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR TCA 90 bp CTTGACAGGGAGAAATTCCTCGTGACCTATGGTCCATCGGCTGATCTGGAAGCTTCCTCTCCTGGACAATaGCTTCTACTTTGCTACTCT +
Preference number: 4 (lower is better)
Translates to: LDREKFLVTYGPSADLEASSPGQ*LLLCYS
Trigger: AGAGTAGCAAAGTAGAAGTCATTGTCCAGGAGAGGA...AGCTTCCAGATCAGCCGATGGACCATAGGTCACGAGGAATTTCTCCCTGTCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR TCA 90 bp ACCCTGCACAAGTCATCGACCCCTCCACACTCCAGTGTGTCATCTGTAATGAGGCCACTTAGAATAAAATaGACAGCCAAGTGGCCAAAG +
Preference number: 4 (lower is better)
Translates to: TLHKSSTPPHSSVSSVMRPLRIK*TAKWPK
Trigger: CTTTGGCCACTTGGCTGTTCATTTTATTCTAAGTGG...CCTCATTACAGATGACACACTGGAGTGTGGAGGGGTCGATGACTTGTGCAGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR TCA 90 bp CCACTTCTACCTTTCTGGACTACGAAGAGCTCCTCCTGGTCTTCCTTATCATTTGGAGGTGGGATGCACTaGAAAGCTCTAACCATTGCC +
Preference number: 4 (lower is better)
Translates to: PLLPFWTTKSSSWSSLSFGGGMH*KALTIA
Trigger: GGCAATGGTTAGAGCTTTTCAGTGCATCCCACCTCC...AAATGATAAGGAAGACCAGGAGGAGCTCTTCGTAGTCCAGAAAGGTAGAAGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR TCA 90 bp GTTATTTCTCCCTCTGGGAGAGAAAGGCACTGTCAAAGTACAAACCCAAGTCAGGGAGGTGGGATGCACTaGAAAGCTCTAACCATTGCC +
Preference number: 4 (lower is better)
Translates to: VISPSGRERHCQSTNPSQGGGMH*KALTIA
Trigger: GGCAATGGTTAGAGCTTTTCAGTGCATCCCACCTCC...CTGACTTGGGTTTGTACTTTGACAGTGCCTTTCTCTCCCAGAGGGAGAAATAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR GCA 90 bp TCCTTGCTGACAAATCCAACCCGAAGTCTGTGCCTCCTAGGGAAAGGACAGGACAAACCCAAGTCAGCGTaGTTTGAAAGATCATGTCAC +
Preference number: 4 (lower is better)
Translates to: SLLTNPTRSLCLLGKGQDKPKSA*FERSCH
Trigger: GTGACATGATCTTTCAAAGCACGCTGACTTGGGTTT...GTCCTGTCCTTTCCCTAGGAGGCACAGACTTCGGGTTGGATTTGTCAGCAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR GCA 90 bp CCACACTCCAGTGTGTCATCTGTAATGAGGATGGGGCACTCCCTTCCACACTGCTGGAATAAAGACACCTaGATGCTCGGATTTGCAAAA +
Preference number: 4 (lower is better)
Translates to: PHSSVSSVMRMGHSLPHCWNKDT*MLGFAK
Trigger: TTTTGCAAATCCGAGCATGCAGGTGTCTTTATTCCA...GCAGTGTGGAAGGGAGTGCCCCATCCTCATTACAGATGACACACTGGAGTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR GCA 90 bp ACCCTGCACAAGTCATCGACCCCTCCACACTCCAGTGTGTCATCTGTAATGAGGGAGAACAAGGACTTGTaGTACTGTATTCTCACAGCA +
Preference number: 4 (lower is better)
Translates to: TLHKSSTPPHSSVSSVMRENKDL*YCILTA
Trigger: TGCTGTGAGAATACAGTAGCACAAGTCCTTGTTCTC...CCTCATTACAGATGACACACTGGAGTGTGGAGGGGTCGATGACTTGTGCAGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR GCA 90 bp ACCCTGCACAAGTCATCGACCCCTCCACACTCCAGTGTGTCATCTGTAATGAGGCATCGTCGTTTCTCCTaGCTTTTGAGAATCTCTATG +
Preference number: 4 (lower is better)
Translates to: TLHKSSTPPHSSVSSVMRHRRFS*LLRISM
Trigger: CATAGAGATTCTCAAAAGGCAGGAGAAACGACGATG...CCTCATTACAGATGACACACTGGAGTGTGGAGGGGTCGATGACTTGTGCAGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611584.4
CDS-3UTR CCA 90 bp TTATTTCTCCCTCTGGGAGAGAAAGGCACTGTCAAAGTACAAACCCAAGTCAGCTCTACTTTGCTACTCTaGGCAGCAGGACGTGGGGTT +
Preference number: 4 (lower is better)
Translates to: LFLPLGEKGTVKVQTQVSSTLLL*AAGRGV
Trigger: AACCCCACGTCCTGCTGCCCAGAGTAGCAAAGTAGA...GCTGACTTGGGTTTGTACTTTGACAGTGCCTTTCTCTCCCAGAGGGAGAAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CCA 90 bp GTTATTTCTCCCTCTGGGAGAGAAAGGCACTGTCAAAGTACAAACCCAAGTCAGTCTACTTTGCTACTCTaGGCAGCAGGACGTGGGGTT +
Preference number: 4 (lower is better)
Translates to: VISPSGRERHCQSTNPSQSTLLL*AAGRGV
Trigger: AACCCCACGTCCTGCTGCCCAGAGTAGCAAAGTAGA...CTGACTTGGGTTTGTACTTTGACAGTGCCTTTCTCTCCCAGAGGGAGAAATAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR TCA 90 bp GTTATTTCTCCCTCTGGGAGAGAAAGGCACTGTCAAAGTACAAACCCAAGTCAGCTAGGGCAACAAGACTaGGAGCAGAGGGCACTAAAA +
Preference number: 4 (lower is better)
Translates to: VISPSGRERHCQSTNPSQLGQQD*EQRALK
Trigger: TTTTAGTGCCCTCTGCTCTCAGTCTTGTTGCCCTAG...CTGACTTGGGTTTGTACTTTGACAGTGCCTTTCTCTCCCAGAGGGAGAAATAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR TCA 90 bp CCTGGTCTTCCTTATCATTTCCTATGTGATTACTTCCGGGTCCTCTTGGAGAACCTAGGGCAACAAGACTaGGAGCAGAGGGCACTAAAA +
Preference number: 4 (lower is better)
Translates to: PGLPYHFLCDYFRVLLENLGQQD*EQRALK
Trigger: TTTTAGTGCCCTCTGCTCTCAGTCTTGTTGCCCTAG...GTTCTCCAAGAGGACCCGGAAGTAATCACATAGGAAATGATAAGGAAGACCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR GCA 90 bp CTTGACAGGGAGAAATTCCTCGTGACCTATGGTCCATCGGCTGATCTGGAAGCTCGCCTACATTCTGTTTaGTCCAGATACTTGGTTTCT +
Preference number: 4 (lower is better)
Translates to: LDREKFLVTYGPSADLEARLHSV*SRYLVS
Trigger: AGAAACCAAGTATCTGGAGCAAACAGAATGTAGGCG...AGCTTCCAGATCAGCCGATGGACCATAGGTCACGAGGAATTTCTCCCTGTCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR GCA 90 bp TCCTTGCTGACAAATCCAACCCGAAGTCTGTGCCTCCTAGGGAAAGGACAGGACCTGCATGCTCGGATTTaGAAAAGGAATGGAAAAGAA +
Preference number: 4 (lower is better)
Translates to: SLLTNPTRSLCLLGKGQDLHARI*KRNGKE
Trigger: TTCTTTTCCATTCCTTTTGCAAATCCGAGCATGCAG...GTCCTGTCCTTTCCCTAGGAGGCACAGACTTCGGGTTGGATTTGTCAGCAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR GCA 90 bp TCCTTGCTGACAAATCCAACCCGAAGTCTGTGCCTCCTAGGGAAAGGACAGGACTGGAATAAAGACACCTaGATGCTCGGATTTGCAAAA +
Preference number: 4 (lower is better)
Translates to: SLLTNPTRSLCLLGKGQDWNKDT*MLGFAK
Trigger: TTTTGCAAATCCGAGCATGCAGGTGTCTTTATTCCA...GTCCTGTCCTTTCCCTAGGAGGCACAGACTTCGGGTTGGATTTGTCAGCAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR GCA 90 bp CTTCAGAGAACAAGGACTTGTGCTACTGTATTCTCACAGCACTCACTGGCCTGGCATGCAGTTTTCCACTaGTTGACAGGGAGAAATTCC +
Preference number: 4 (lower is better)
Translates to: LQRTRTCATVFSQHSLAWHAVFH*LTGRNS
Trigger: GGAATTTCTCCCTGTCAAGCAGTGGAAAACTGCATG...CCAGGCCAGTGAGTGCTGTGAGAATACAGTAGCACAAGTCCTTGTTCTCTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR GCA 90 bp CTTGACAGGGAGAAATTCCTCGTGACCTATGGTCCATCGGCTGATCTGGAAGCTGAGAACAAGGACTTGTaGTACTGTATTCTCACAGCA +
Preference number: 4 (lower is better)
Translates to: LDREKFLVTYGPSADLEAENKDL*YCILTA
Trigger: TGCTGTGAGAATACAGTAGCACAAGTCCTTGTTCTC...AGCTTCCAGATCAGCCGATGGACCATAGGTCACGAGGAATTTCTCCCTGTCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CCA 90 bp TTATTTCTCCCTCTGGGAGAGAAAGGCACTGTCAAAGTACAAACCCAAGTCAGCGTCCATCGGCTGATCTaGAAGCTGAACCCTTGGAAT +
Preference number: 4 (lower is better)
Translates to: LFLPLGEKGTVKVQTQVSVHRLI*KLNPWN
Trigger: ATTCCAAGGGTTCAGCTTCCAGATCAGCCGATGGAC...GCTGACTTGGGTTTGTACTTTGACAGTGCCTTTCTCTCCCAGAGGGAGAAATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CCA 90 bp TTATTTCTCCCTCTGGGAGAGAAAGGCACTGTCAAAGTACAAACCCAAGTCAGCACTTCCGGGTCCTCTTaGAGAACAGAGCATTTTGCC +
Preference number: 4 (lower is better)
Translates to: LFLPLGEKGTVKVQTQVSTSGSS*RTEHFA
Trigger: GGCAAAATGCTCTGTTCTCCAAGAGGACCCGGAAGT...GCTGACTTGGGTTTGTACTTTGACAGTGCCTTTCTCTCCCAGAGGGAGAAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CCA 90 bp CCACTTCTACCTTTCTGGACTACGAAGAGCTCCTCCTGGTCTTCCTTATCATTTACTTCCGGGTCCTCTTaGAGAACAGAGCATTTTGCC +
Preference number: 4 (lower is better)
Translates to: PLLPFWTTKSSSWSSLSFTSGSS*RTEHFA
Trigger: GGCAAAATGCTCTGTTCTCCAAGAGGACCCGGAAGT...AAATGATAAGGAAGACCAGGAGGAGCTCTTCGTAGTCCAGAAAGGTAGAAGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR TCA 90 bp CCTGGTCTTCCTTATCATTTCCTATGTGATTACTTCCGGGTCCTCTTGGAGAACCAGTTTTCCACTGCTTaGCAGGGAGAAATTCCTCGT +
Preference number: 4 (lower is better)
Translates to: PGLPYHFLCDYFRVLLENQFSTA*QGEIPR
Trigger: ACGAGGAATTTCTCCCTGTCAAGCAGTGGAAAACTG...GTTCTCCAAGAGGACCCGGAAGTAATCACATAGGAAATGATAAGGAAGACCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR TCA 90 bp CATTTCCTATGTGATTACTTCCGGGTCCTCTTGGAGAACAGAGCATTTTGCCTCCAGTTTTCCACTGCTTaGCAGGGAGAAATTCCTCGT +
Preference number: 4 (lower is better)
Translates to: HFLCDYFRVLLENRAFCLQFSTA*QGEIPR
Trigger: ACGAGGAATTTCTCCCTGTCAAGCAGTGGAAAACTG...GAGGCAAAATGCTCTGTTCTCCAAGAGGACCCGGAAGTAATCACATAGGAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR TCA 90 bp CCTAAAGTTATTTCTCCCTCTGGGAGAGAAAGGCACTGTCAAAGTACAAACCCACTAGGGCAACAAGACTaGGAGCAGAGGGCACTAAAA +
Preference number: 4 (lower is better)
Translates to: PKVISPSGRERHCQSTNPLGQQD*EQRALK
Trigger: TTTTAGTGCCCTCTGCTCTCAGTCTTGTTGCCCTAG...TGGGTTTGTACTTTGACAGTGCCTTTCTCTCCCAGAGGGAGAAATAACTTTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR GCA 90 bp TCCCACTTCTACCTTTCTGGACTACGAAGAGCTCCTCCTGGTCTTCCTTATCATCATGCAGTTTTCCACTaGTTGACAGGGAGAAATTCC +
Preference number: 4 (lower is better)
Translates to: SHFYLSGLRRAPPGLPYHHAVFH*LTGRNS
Trigger: GGAATTTCTCCCTGTCAAGCAGTGGAAAACTGCATG...ATGATAAGGAAGACCAGGAGGAGCTCTTCGTAGTCCAGAAAGGTAGAAGTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR GCA 90 bp CATTTCCTATGTGATTACTTCCGGGTCCTCTTGGAGAACAGAGCATTTTGCCTCGCATTTTGCCTCCCATaGAGTTTTCCACTGCTTGAC +
Preference number: 4 (lower is better)
Translates to: HFLCDYFRVLLENRAFCLAFCLP*SFPLLD
Trigger: GTCAAGCAGTGGAAAACTGCATGGGAGGCAAAATGC...GAGGCAAAATGCTCTGTTCTCCAAGAGGACCCGGAAGTAATCACATAGGAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR GCA 90 bp CCACTTCTACCTTTCTGGACTACGAAGAGCTCCTCCTGGTCTTCCTTATCATTTGCATTTTGCCTCCCATaGAGTTTTCCACTGCTTGAC +
Preference number: 4 (lower is better)
Translates to: PLLPFWTTKSSSWSSLSFAFCLP*SFPLLD
Trigger: GTCAAGCAGTGGAAAACTGCATGGGAGGCAAAATGC...AAATGATAAGGAAGACCAGGAGGAGCTCTTCGTAGTCCAGAAAGGTAGAAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR GCA 90 bp CCACTTCTACCTTTCTGGACTACGAAGAGCTCCTCCTGGTCTTCCTTATCATTTCACACATTTACTGAATaGCCACTGCACACAGGAGTG +
Preference number: 4 (lower is better)
Translates to: PLLPFWTTKSSSWSSLSFHTFTE*PLHTGV
Trigger: CACTCCTGTGTGCAGTGGGCATTCAGTAAATGTGTG...AAATGATAAGGAAGACCAGGAGGAGCTCTTCGTAGTCCAGAAAGGTAGAAGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR GCA 90 bp CATTTCCTATGTGATTACTTCCGGGTCCTCTTGGAGAACAGAGCATTTTGCCTCCACACATTTACTGAATaGCCACTGCACACAGGAGTG +
Preference number: 4 (lower is better)
Translates to: HFLCDYFRVLLENRAFCLHTFTE*PLHTGV
Trigger: CACTCCTGTGTGCAGTGGGCATTCAGTAAATGTGTG...GAGGCAAAATGCTCTGTTCTCCAAGAGGACCCGGAAGTAATCACATAGGAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CCA 90 bp TCCCACTTCTACCTTTCTGGACTACGAAGAGCTCCTCCTGGTCTTCCTTATCATTGGAAGCTGAACCCTTaGAATAAAGACACCTGCATG +
Preference number: 4 (lower is better)
Translates to: SHFYLSGLRRAPPGLPYHWKLNP*NKDTCM
Trigger: CATGCAGGTGTCTTTATTCCAAGGGTTCAGCTTCCA...ATGATAAGGAAGACCAGGAGGAGCTCTTCGTAGTCCAGAAAGGTAGAAGTGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CCA 90 bp CCTAAAGTTATTTCTCCCTCTGGGAGAGAAAGGCACTGTCAAAGTACAAACCCAGTCCATCGGCTGATCTaGAAGCTGAACCCTTGGAAT +
Preference number: 4 (lower is better)
Translates to: PKVISPSGRERHCQSTNPVHRLI*KLNPWN
Trigger: ATTCCAAGGGTTCAGCTTCCAGATCAGCCGATGGAC...TGGGTTTGTACTTTGACAGTGCCTTTCTCTCCCAGAGGGAGAAATAACTTTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR TCA 90 bp CCACTTCTACCTTTCTGGACTACGAAGAGCTCCTCCTGGTCTTCCTTATCATTTTCCCATTGCTGGCGCTaGAGTTCTTTTCTCATATCT +
Preference number: 4 (lower is better)
Translates to: PLLPFWTTKSSSWSSLSFSHCWR*SSFLIS
Trigger: AGATATGAGAAAAGAACTTCAGCGCCAGCAATGGGA...AAATGATAAGGAAGACCAGGAGGAGCTCTTCGTAGTCCAGAAAGGTAGAAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR GCA 90 bp TCCCACTTCTACCTTTCTGGACTACGAAGAGCTCCTCCTGGTCTTCCTTATCATAAACCCAAGTCAGCGTaGTTTGAAAGATCATGTCAC +
Preference number: 4 (lower is better)
Translates to: SHFYLSGLRRAPPGLPYHKPKSA*FERSCH
Trigger: GTGACATGATCTTTCAAAGCACGCTGACTTGGGTTT...ATGATAAGGAAGACCAGGAGGAGCTCTTCGTAGTCCAGAAAGGTAGAAGTGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR GCA 90 bp CTTCAGAGAACAAGGACTTGTGCTACTGTATTCTCACAGCACTCACTGGCCTGGATAAAGACACCTGCATaGTCGGATTTGCAAAAGGAA +
Preference number: 4 (lower is better)
Translates to: LQRTRTCATVFSQHSLAWIKTPA*SDLQKE
Trigger: TTCCTTTTGCAAATCCGAGCATGCAGGTGTCTTTAT...CCAGGCCAGTGAGTGCTGTGAGAATACAGTAGCACAAGTCCTTGTTCTCTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CCA 90 bp TCCTATGTGATTACTTCCGGGTCCTCTTGGAGAACAGAGCATTTTGCCTCCCATCATCTCCAGCAGATCTaGCAAATCCTTTCTCATACA +
Preference number: 4 (lower is better)
Translates to: SYVITSGSSWRTEHFASHHLQQI*QILSHT
Trigger: TGTATGAGAAAGGATTTGCCAGATCTGCTGGAGATG...ATGGGAGGCAAAATGCTCTGTTCTCCAAGAGGACCCGGAAGTAATCACATAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CCA 90 bp TCCCACTTCTACCTTTCTGGACTACGAAGAGCTCCTCCTGGTCTTCCTTATCATCATCTCCAGCAGATCTaGCAAATCCTTTCTCATACA +
Preference number: 4 (lower is better)
Translates to: SHFYLSGLRRAPPGLPYHHLQQI*QILSHT
Trigger: TGTATGAGAAAGGATTTGCCAGATCTGCTGGAGATG...ATGATAAGGAAGACCAGGAGGAGCTCTTCGTAGTCCAGAAAGGTAGAAGTGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CCA 90 bp CCACTTCTACCTTTCTGGACTACGAAGAGCTCCTCCTGGTCTTCCTTATCATTTTGGAAGCTGAACCCTTaGAATAAAGACACCTGCATG +
Preference number: 4 (lower is better)
Translates to: PLLPFWTTKSSSWSSLSFWKLNP*NKDTCM
Trigger: CATGCAGGTGTCTTTATTCCAAGGGTTCAGCTTCCA...AAATGATAAGGAAGACCAGGAGGAGCTCTTCGTAGTCCAGAAAGGTAGAAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CCA 90 bp GTTATTTCTCCCTCTGGGAGAGAAAGGCACTGTCAAAGTACAAACCCAAGTCAGACGAAGAGCTCCTCCTaGTCTTCCTTATCATTTCCT +
Preference number: 4 (lower is better)
Translates to: VISPSGRERHCQSTNPSQTKSSS*SSLSFP
Trigger: AGGAAATGATAAGGAAGACCAGGAGGAGCTCTTCGT...CTGACTTGGGTTTGTACTTTGACAGTGCCTTTCTCTCCCAGAGGGAGAAATAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CCA 90 bp CATTTCCTATGTGATTACTTCCGGGTCCTCTTGGAGAACAGAGCATTTTGCCTCACGAAGAGCTCCTCCTaGTCTTCCTTATCATTTCCT +
Preference number: 4 (lower is better)
Translates to: HFLCDYFRVLLENRAFCLTKSSS*SSLSFP
Trigger: AGGAAATGATAAGGAAGACCAGGAGGAGCTCTTCGT...GAGGCAAAATGCTCTGTTCTCCAAGAGGACCCGGAAGTAATCACATAGGAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR TCA 90 bp CATTTCCTATGTGATTACTTCCGGGTCCTCTTGGAGAACAGAGCATTTTGCCTCCCACTTAGAATAAAATaGACAGCCAAGTGGCCAAAG +
Preference number: 4 (lower is better)
Translates to: HFLCDYFRVLLENRAFCLPLRIK*TAKWPK
Trigger: CTTTGGCCACTTGGCTGTTCATTTTATTCTAAGTGG...GAGGCAAAATGCTCTGTTCTCCAAGAGGACCCGGAAGTAATCACATAGGAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR TCA 90 bp TCCCACTTCTACCTTTCTGGACTACGAAGAGCTCCTCCTGGTCTTCCTTATCATTTATCATTTCCTATGTaGTTACTTCCGGGTCCTCTT +
Preference number: 4 (lower is better)
Translates to: SHFYLSGLRRAPPGLPYHLSFPM*LLPGPL
Trigger: AAGAGGACCCGGAAGTAATCACATAGGAAATGATAA...ATGATAAGGAAGACCAGGAGGAGCTCTTCGTAGTCCAGAAAGGTAGAAGTGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR TCA 90 bp TTCTATCGCAGCTCACATGTAAATCCAGGTAGGTATGTCCCTATCCCACTTAGATCTCGTTTTGTTCTCTaGTCTGTTGTCTGTTCACGC +
Preference number: 4 (lower is better)
Translates to: FYRSSHVNPGRYVPIPLRSRFVL*SVVCSR
Trigger: GCGTGAACAGACAACAGATCAGAGAACAAAACGAGA...TCTAAGTGGGATAGGGACATACCTACCTGGATTTACATGTGAGCTGCGATAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383794.7
CDS-3UTR GCA 90 bp GTTATTTCTCCCTCTGGGAGAGAAAGGCACTGTCAAAGTACAAACCCAAGTCAGCGCCTACATTCTGTTTaGTCCAGATACTTGGTTTCT +
Preference number: 4 (lower is better)
Translates to: VISPSGRERHCQSTNPSQRLHSV*SRYLVS
Trigger: AGAAACCAAGTATCTGGAGCAAACAGAATGTAGGCG...CTGACTTGGGTTTGTACTTTGACAGTGCCTTTCTCTCCCAGAGGGAGAAATAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR GCA 90 bp GTTATTTCTCCCTCTGGGAGAGAAAGGCACTGTCAAAGTACAAACCCAAGTCAGGAGAACAAGGACTTGTaGTACTGTATTCTCACAGCA +
Preference number: 4 (lower is better)
Translates to: VISPSGRERHCQSTNPSQENKDL*YCILTA
Trigger: TGCTGTGAGAATACAGTAGCACAAGTCCTTGTTCTC...CTGACTTGGGTTTGTACTTTGACAGTGCCTTTCTCTCCCAGAGGGAGAAATAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
3UTR CAA 72 bp CCTTATCATTTCCTATGTGATTACTTCCGGGTCCTCTaGGAGAACAGAGCATTTTGCCTCCCATGCAGTTTT +
Preference number: 4 (lower is better)
Translates to: PYHFLCDYFRVL*ENRAFCLPCSF
Trigger: AAAACTGCATGGGAGGCAAAATGCTCTGTTCTCCAAGAGGACCCGGAAGTAATCACATAGGAAATGATAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR TCA 90 bp TTATTTCTCCCTCTGGGAGAGAAAGGCACTGTCAAAGTACAAACCCAAGTCAGCTTATCATTTCCTATGTaGTTACTTCCGGGTCCTCTT +
Preference number: 4 (lower is better)
Translates to: LFLPLGEKGTVKVQTQVSLSFPM*LLPGPL
Trigger: AAGAGGACCCGGAAGTAATCACATAGGAAATGATAA...GCTGACTTGGGTTTGTACTTTGACAGTGCCTTTCTCTCCCAGAGGGAGAAATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR GCA 90 bp TTCTATCGCAGCTCACATGTAAATCCAGGTAGGTATGTCCCTATCCCACTTAGAAAACCCAAGTCAGCGTaGTTTGAAAGATCATGTCAC +
Preference number: 4 (lower is better)
Translates to: FYRSSHVNPGRYVPIPLRKPKSA*FERSCH
Trigger: GTGACATGATCTTTCAAAGCACGCTGACTTGGGTTT...TCTAAGTGGGATAGGGACATACCTACCTGGATTTACATGTGAGCTGCGATAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR GCA 90 bp CCTGGTCTTCCTTATCATTTCCTATGTGATTACTTCCGGGTCCTCTTGGAGAACCTGCATGCTCGGATTTaGAAAAGGAATGGAAAAGAA +
Preference number: 4 (lower is better)
Translates to: PGLPYHFLCDYFRVLLENLHARI*KRNGKE
Trigger: TTCTTTTCCATTCCTTTTGCAAATCCGAGCATGCAG...GTTCTCCAAGAGGACCCGGAAGTAATCACATAGGAAATGATAAGGAAGACCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR GCA 90 bp CATTTCCTATGTGATTACTTCCGGGTCCTCTTGGAGAACAGAGCATTTTGCCTCATAAAGACACCTGCATaGTCGGATTTGCAAAAGGAA +
Preference number: 4 (lower is better)
Translates to: HFLCDYFRVLLENRAFCLIKTPA*SDLQKE
Trigger: TTCCTTTTGCAAATCCGAGCATGCAGGTGTCTTTAT...GAGGCAAAATGCTCTGTTCTCCAAGAGGACCCGGAAGTAATCACATAGGAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CCA 90 bp CCTAAAGTTATTTCTCCCTCTGGGAGAGAAAGGCACTGTCAAAGTACAAACCCACATCTCCAGCAGATCTaGCAAATCCTTTCTCATACA +
Preference number: 4 (lower is better)
Translates to: PKVISPSGRERHCQSTNPHLQQI*QILSHT
Trigger: TGTATGAGAAAGGATTTGCCAGATCTGCTGGAGATG...TGGGTTTGTACTTTGACAGTGCCTTTCTCTCCCAGAGGGAGAAATAACTTTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR GCA 90 bp TTCTATCGCAGCTCACATGTAAATCCAGGTAGGTATGTCCCTATCCCACTTAGATGGAATAAAGACACCTaGATGCTCGGATTTGCAAAA +
Preference number: 4 (lower is better)
Translates to: FYRSSHVNPGRYVPIPLRWNKDT*MLGFAK
Trigger: TTTTGCAAATCCGAGCATGCAGGTGTCTTTATTCCA...TCTAAGTGGGATAGGGACATACCTACCTGGATTTACATGTGAGCTGCGATAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR GCA 90 bp TTATTTCTCCCTCTGGGAGAGAAAGGCACTGTCAAAGTACAAACCCAAGTCAGCTCTAAGGTTTTCATCTaGTTGTTTCTCAACTCTTTG +
Preference number: 4 (lower is better)
Translates to: LFLPLGEKGTVKVQTQVSSKVFI*LFLNSL
Trigger: CAAAGAGTTGAGAAACAAGCAGATGAAAACCTTAGA...GCTGACTTGGGTTTGTACTTTGACAGTGCCTTTCTCTCCCAGAGGGAGAAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383794.7
CDS-3UTR CAA 90 bp TCCTTGCTGACAAATCCAACCCGAAGTCTGTGCCTCCTAGGGAAAGGACAGGACCAGCAGGACGTGGGGTaGGCACAGCCTCTGGCTCCG +
Preference number: 5 (lower is better)
Translates to: SLLTNPTRSLCLLGKGQDQQDVG*AQPLAP
Trigger: CGGAGCCAGAGGCTGTGCCAACCCCACGTCCTGCTG...GTCCTGTCCTTTCCCTAGGAGGCACAGACTTCGGGTTGGATTTGTCAGCAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS CCA 90 bp TTGGTGTCCTTCCTCTCCTGGACAATGACTTCTACTTTGCTACTCTaGGCAGCAGGACGTGGGGTTGGCACAGCCTCTGGCTCCGGTGGC +
Preference number: 5 (lower is better)
Translates to: LVSFLSWTMTSTLLL*AAGRGVGTASGSGG
Trigger: GCCACCGGAGCCAGAGGCTGTGCCAACCCCACGTCCTGCTGCCCAGAGTAGCAAAGTAGAAGTCATTGTCCAGGAGAGGAAGGACACCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000476763.1
ENST00000611584.4
CDS CCA 90 bp CTCCTGGACAATGACTTCTACTTTGCTACTCTGGGCAGCAGGACGTaGGGTTGGCACAGCCTCTGGCTCCGGTGGCAAAGGCCCAATAAC +
Preference number: 5 (lower is better)
Translates to: LLDNDFYFATLGSRT*GWHSLWLRWQRPNN
Trigger: GTTATTGGGCCTTTGCCACCGGAGCCAGAGGCTGTGCCAACCCCACGTCCTGCTGCCCAGAGTAGCAAAGTAGAAGTCATTGTCCAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000476763.1
ENST00000611584.4
CDS CCA 90 bp CACTCCCGGATGTGTGGCACTCCAGGCTTGGTGTCCTTCCTCTCCTaGACAATGACTTCTACTTTGCTACTCTGGGCAGCAGGACGTGGG +
Preference number: 5 (lower is better)
Translates to: HSRMCGTPGLVSFLS*TMTSTLLLWAAGRG
Trigger: CCCACGTCCTGCTGCCCAGAGTAGCAAAGTAGAAGTCATTGTCCAGGAGAGGAAGGACACCAAGCCTGGAGTGCCACACATCCGGGAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000476763.1
ENST00000611584.4
CDS TCA 90 bp GGATGTGTGGCACTCCAGGCTTGGTGTCCTTCCTCTCCTGGACAATaGCTTCTACTTTGCTACTCTGGGCAGCAGGACGTGGGGTTGGCA +
Preference number: 5 (lower is better)
Translates to: GCVALQAWCPSSPGQ*LLLCYSGQQDVGLA
Trigger: TGCCAACCCCACGTCCTGCTGCCCAGAGTAGCAAAGTAGAAGTCATTGTCCAGGAGAGGAAGGACACCAAGCCTGGAGTGCCACACATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000476763.1
ENST00000611584.4
CDS CCA 90 bp GACAATGACTTCTACTTTGCTACTCTGGGCAGCAGGACGTGGGGTTaGCACAGCCTCTGGCTCCGGTGGCAAAGGCCCAATAACATCTCC +
Preference number: 5 (lower is better)
Translates to: DNDFYFATLGSRTWG*HSLWLRWQRPNNIS
Trigger: GGAGATGTTATTGGGCCTTTGCCACCGGAGCCAGAGGCTGTGCCAACCCCACGTCCTGCTGCCCAGAGTAGCAAAGTAGAAGTCATTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000476763.1
ENST00000611584.4
CDS-3UTR CAA 90 bp CCACACTCCAGTGTGTCATCTGTAATGAGGATGGGGCACTCCCTTCCACACTGCTTCTTCACTGGGGTCTaGGGGAGGAGGGATCTCTCC +
Preference number: 5 (lower is better)
Translates to: PHSSVSSVMRMGHSLPHCFFTGV*GRRDLS
Trigger: GGAGAGATCCCTCCTCCCCAAGACCCCAGTGAAGAA...GCAGTGTGGAAGGGAGTGCCCCATCCTCATTACAGATGACACACTGGAGTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303688.8
ENST00000383794.7
CDS-3UTR CAA 90 bp GAGGATGGGGCACTCCCTTCCACACTGCAGCACTGCGGGAACCGAGACAATGCCTTCTTCTTCCTCCCATaGCTGGCGCTGAAGTTCTTT +
Preference number: 5 (lower is better)
Translates to: EDGALPSTLQHCGNRDNAFFFLP*LALKFF
Trigger: AAAGAACTTCAGCGCCAGCAATGGGAGGAAGAAGAA...GGCATTGTCTCGGTTCCCGCAGTGCTGCAGTGTGGAAGGGAGTGCCCCATCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CAA 90 bp GAGGATGGGGCACTCCCTTCCACACTGCAGCACTGCGGGAACCGAGACAATGCCACAATGACTTCTACTTaGCTACTCTGGGCAGCAGGA +
Preference number: 5 (lower is better)
Translates to: EDGALPSTLQHCGNRDNATMTST*LLWAAG
Trigger: TCCTGCTGCCCAGAGTAGCAAAGTAGAAGTCATTGT...GGCATTGTCTCGGTTCCCGCAGTGCTGCAGTGTGGAAGGGAGTGCCCCATCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CAA 90 bp TCCTTGCTGACAAATCCAACCCGAAGTCTGTGCCTCCTAGGGAAAGGACAGGACTGTGGCACTCCAGGCTaGGTGTCCTTCCTCTCCTGG +
Preference number: 5 (lower is better)
Translates to: SLLTNPTRSLCLLGKGQDCGTPG*VSFLSW
Trigger: CCAGGAGAGGAAGGACACCAAGCCTGGAGTGCCACA...GTCCTGTCCTTTCCCTAGGAGGCACAGACTTCGGGTTGGATTTGTCAGCAAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CAA 90 bp GCACTCCCTTCCACACTGCAGCACTGCGGGAACCGAGACAATGCCATCGCAGAGGCAGTTTTCCACTGCTaGACAGGGAGAAATTCCTCG +
Preference number: 5 (lower is better)
Translates to: ALPSTLQHCGNRDNAIAEAVFHC*TGRNSS
Trigger: CGAGGAATTTCTCCCTGTCAAGCAGTGGAAAACTGC...CTCTGCGATGGCATTGTCTCGGTTCCCGCAGTGCTGCAGTGTGGAAGGGAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CAA 90 bp GCACTCCCTTCCACACTGCAGCACTGCGGGAACCGAGACAATGCCATCGCAGAGTCAACTCTCAACTGCTaGTGTGCAGCTGTAGGAACC +
Preference number: 5 (lower is better)
Translates to: ALPSTLQHCGNRDNAIAESTLNC*CAAVGT
Trigger: GGTTCCTACAGCTGCACACAAGCAGTTGAGAGTTGA...CTCTGCGATGGCATTGTCTCGGTTCCCGCAGTGCTGCAGTGTGGAAGGGAGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CAA 90 bp CCTGAATGTGAGGAAGCCGAGCATGGGGGCGACAGGGAGGTGGGATGCACTGAATCAACTCTCAACTGCTaGTGTGCAGCTGTAGGAACC +
Preference number: 5 (lower is better)
Translates to: PECEEAEHGGDREVGCTESTLNC*CAAVGT
Trigger: GGTTCCTACAGCTGCACACAAGCAGTTGAGAGTTGA...TTCAGTGCATCCCACCTCCCTGTCGCCCCCATGCTCGGCTTCCTCACATTCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CAA 90 bp CCTGAATGTGAGGAAGCCGAGCATGGGGGCGACAGGGAGGTGGGATGCACTGAACGTTTCTCCTGCCTTTaGAGAATCTCTATGGGCACC +
Preference number: 5 (lower is better)
Translates to: PECEEAEHGGDREVGCTERFSCL*RISMGT
Trigger: GGTGCCCATAGAGATTCTCAAAAGGCAGGAGAAACG...TTCAGTGCATCCCACCTCCCTGTCGCCCCCATGCTCGGCTTCCTCACATTCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611584.4
CDS-3UTR CAA 90 bp CCTGAATGTGAGGAAGCCGAGCATGGGGGCGACAGGGAGGTGGGATGCACTGAATTCTTCTTCCTCCCATaGCTGGCGCTGAAGTTCTTT +
Preference number: 5 (lower is better)
Translates to: PECEEAEHGGDREVGCTEFFFLP*LALKFF
Trigger: AAAGAACTTCAGCGCCAGCAATGGGAGGAAGAAGAA...TTCAGTGCATCCCACCTCCCTGTCGCCCCCATGCTCGGCTTCCTCACATTCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CAA 90 bp CCTGGTCTTCCTTATCATTTCCTATGTGATTACTTCCGGGTCCTCTTGGAGAACCAGCAGGACGTGGGGTaGGCACAGCCTCTGGCTCCG +
Preference number: 5 (lower is better)
Translates to: PGLPYHFLCDYFRVLLENQQDVG*AQPLAP
Trigger: CGGAGCCAGAGGCTGTGCCAACCCCACGTCCTGCTG...GTTCTCCAAGAGGACCCGGAAGTAATCACATAGGAAATGATAAGGAAGACCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CAA 90 bp CCACTTCTACCTTTCTGGACTACGAAGAGCTCCTCCTGGTCTTCCTTATCATTTCAGCAGGACGTGGGGTaGGCACAGCCTCTGGCTCCG +
Preference number: 5 (lower is better)
Translates to: PLLPFWTTKSSSWSSLSFQQDVG*AQPLAP
Trigger: CGGAGCCAGAGGCTGTGCCAACCCCACGTCCTGCTG...AAATGATAAGGAAGACCAGGAGGAGCTCTTCGTAGTCCAGAAAGGTAGAAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CAA 90 bp TGCTACTGTATTCTCACAGCACTCACTGGCCTGGGAACCAGCTGTGGGAGCCCTCCTTTCTCCTGCCTTTaGAGAATCTCTATGGGCACC +
Preference number: 5 (lower is better)
Translates to: CYCILTALTGLGTSCGSPPFSCL*RISMGT
Trigger: GGTGCCCATAGAGATTCTCAAAAGGCAGGAGAAAGG...AGGGCTCCCACAGCTGGTTCCCAGGCCAGTGAGTGCTGTGAGAATACAGTAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303688.8
ENST00000383794.7
CDS-3UTR CAA 90 bp CTTCAGAGAACAAGGACTTGTGCTACTGTATTCTCACAGCACTCACTGGCCTGGTTCTTCACTGGGGTCTaGGGGAGGAGGGATCTCTCC +
Preference number: 5 (lower is better)
Translates to: LQRTRTCATVFSQHSLAWFFTGV*GRRDLS
Trigger: GGAGAGATCCCTCCTCCCCAAGACCCCAGTGAAGAA...CCAGGCCAGTGAGTGCTGTGAGAATACAGTAGCACAAGTCCTTGTTCTCTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303688.8
ENST00000383794.7
CDS-3UTR CAA 90 bp TGCTACTGTATTCTCACAGCACTCACTGGCCTGGGAACCAGCTGTGGGAGCCCTTTCTTCTTCCTCCCATaGCTGGCGCTGAAGTTCTTT +
Preference number: 5 (lower is better)
Translates to: CYCILTALTGLGTSCGSPFFFLP*LALKFF
Trigger: AAAGAACTTCAGCGCCAGCAATGGGAGGAAGAAGAA...AGGGCTCCCACAGCTGGTTCCCAGGCCAGTGAGTGCTGTGAGAATACAGTAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CAA 90 bp TCCCACTTCTACCTTTCTGGACTACGAAGAGCTCCTCCTGGTCTTCCTTATCATTGTGGCACTCCAGGCTaGGTGTCCTTCCTCTCCTGG +
Preference number: 5 (lower is better)
Translates to: SHFYLSGLRRAPPGLPYHCGTPG*VSFLSW
Trigger: CCAGGAGAGGAAGGACACCAAGCCTGGAGTGCCACA...ATGATAAGGAAGACCAGGAGGAGCTCTTCGTAGTCCAGAAAGGTAGAAGTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CAA 90 bp CCACACTCCAGTGTGTCATCTGTAATGAGGATGGGGCACTCCCTTCCACACTGCGCAGTTTTCCACTGCTaGACAGGGAGAAATTCCTCG +
Preference number: 5 (lower is better)
Translates to: PHSSVSSVMRMGHSLPHCAVFHC*TGRNSS
Trigger: CGAGGAATTTCTCCCTGTCAAGCAGTGGAAAACTGC...GCAGTGTGGAAGGGAGTGCCCCATCCTCATTACAGATGACACACTGGAGTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CAA 90 bp GCACTCCCTTCCACACTGCAGCACTGCGGGAACCGAGACAATGCCATCGCAGAGTTGTTTCTCAACTCTTaGTCTCGGGCAAAGGCAAAA +
Preference number: 5 (lower is better)
Translates to: ALPSTLQHCGNRDNAIAELFLNS*SRAKAK
Trigger: TTTTGCCTTTGCCCGAGACAAAGAGTTGAGAAACAA...CTCTGCGATGGCATTGTCTCGGTTCCCGCAGTGCTGCAGTGTGGAAGGGAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383794.7
CDS-3UTR CAA 90 bp CCCACCCCCAACCCTCTCCTTATTACTAATGACACGGGAACCCACCTGCTCCACCCTTCTCAGCTCGATTaGAAACGCCTACATTCTGTT +
Preference number: 5 (lower is better)
Translates to: PTPNPLLITNDTGTHLLHPSQLD*KRLHSV
Trigger: AACAGAATGTAGGCGTTTCAAATCGAGCTGAGAAGG...GTGGAGCAGGTGGGTTCCCGTGTCATTAGTAATAAGGAGAGGGTTGGGGGTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CAA 90 bp CCCACCCCCAACCCTCTCCTTATTACTAATGACACGGGAACCCACCTGCTCCACGATGCCTCCATTTCTTaGCGCTTGTCTATGATCTTC +
Preference number: 5 (lower is better)
Translates to: PTPNPLLITNDTGTHLLHDASIS*RLSMIF
Trigger: GAAGATCATAGACAAGCGCAAAGAAATGGAGGCATC...GTGGAGCAGGTGGGTTCCCGTGTCATTAGTAATAAGGAGAGGGTTGGGGGTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CAA 90 bp CATTTCCTATGTGATTACTTCCGGGTCCTCTTGGAGAACAGAGCATTTTGCCTCTGTGGCACTCCAGGCTaGGTGTCCTTCCTCTCCTGG +
Preference number: 5 (lower is better)
Translates to: HFLCDYFRVLLENRAFCLCGTPG*VSFLSW
Trigger: CCAGGAGAGGAAGGACACCAAGCCTGGAGTGCCACA...GAGGCAAAATGCTCTGTTCTCCAAGAGGACCCGGAAGTAATCACATAGGAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CAA 90 bp TGCTACTGTATTCTCACAGCACTCACTGGCCTGGGAACCAGCTGTGGGAGCCCTCCTGCATGCTCGGATTaGCAAAAGGAATGGAAAAGA +
Preference number: 5 (lower is better)
Translates to: CYCILTALTGLGTSCGSPPACSD*QKEWKR
Trigger: TCTTTTCCATTCCTTTTGCAAATCCGAGCATGCAGG...AGGGCTCCCACAGCTGGTTCCCAGGCCAGTGAGTGCTGTGAGAATACAGTAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CAA 90 bp TCCTTGCTGACAAATCCAACCCGAAGTCTGTGCCTCCTAGGGAAAGGACAGGACTACTTCCGGGTCCTCTaGGAGAACAGAGCATTTTGC +
Preference number: 5 (lower is better)
Translates to: SLLTNPTRSLCLLGKGQDYFRVL*ENRAFC
Trigger: GCAAAATGCTCTGTTCTCCAAGAGGACCCGGAAGTA...GTCCTGTCCTTTCCCTAGGAGGCACAGACTTCGGGTTGGATTTGTCAGCAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CAA 90 bp CCTGAATGTGAGGAAGCCGAGCATGGGGGCGACAGGGAGGTGGGATGCACTGAAGGGGTTAGACATCAATaGTGTTTAAGTCTGAGATCT +
Preference number: 5 (lower is better)
Translates to: PECEEAEHGGDREVGCTEGVRHQ*CLSLRS
Trigger: AGATCTCAGACTTAAACACAATTGATGTCTAACCCC...TTCAGTGCATCCCACCTCCCTGTCGCCCCCATGCTCGGCTTCCTCACATTCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS CCA 90 bp TCTGAGCTAATCCATGATGTTACCAACCATTCTTCACTGGGGTCTTaGGGAGGAGGGATCTCTCCCTCAGGAAGGTTTTCCTCATCGTCG +
Preference number: 5 (lower is better)
Translates to: SELIHDVTNHSSLGS*GGGISPSGRFSSSS
Trigger: CGACGATGAGGAAAACCTTCCTGAGGGAGAGATCCCTCCTCCCCAAGACCCCAGTGAAGAATGGTTGGTAACATCATGGATTAGCTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463438.5
CDS-3UTR CAA 90 bp CCCACCCCCAACCCTCTCCTTATTACTAATGACACGGGAACCCACCTGCTCCACTCCATTTCTTTGCGCTaGTCTATGATCTTCTGTGTG +
Preference number: 5 (lower is better)
Translates to: PTPNPLLITNDTGTHLLHSISLR*SMIFCV
Trigger: CACACAGAAGATCATAGACAAGCGCAAAGAAATGGA...GTGGAGCAGGTGGGTTCCCGTGTCATTAGTAATAAGGAGAGGGTTGGGGGTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CAA 90 bp CCACACTCCAGTGTGTCATCTGTAATGAGGATGGGGCACTCCCTTCCACACTGCCCTGCATGCTCGGATTaGCAAAAGGAATGGAAAAGA +
Preference number: 5 (lower is better)
Translates to: PHSSVSSVMRMGHSLPHCPACSD*QKEWKR
Trigger: TCTTTTCCATTCCTTTTGCAAATCCGAGCATGCAGG...GCAGTGTGGAAGGGAGTGCCCCATCCTCATTACAGATGACACACTGGAGTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CAA 90 bp TCCTTGCTGACAAATCCAACCCGAAGTCTGTGCCTCCTAGGGAAAGGACAGGACCCTTCTCAGCTCGATTaGAAACGCCTACATTCTGTT +
Preference number: 5 (lower is better)
Translates to: SLLTNPTRSLCLLGKGQDPSQLD*KRLHSV
Trigger: AACAGAATGTAGGCGTTTCAAATCGAGCTGAGAAGG...GTCCTGTCCTTTCCCTAGGAGGCACAGACTTCGGGTTGGATTTGTCAGCAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CAA 90 bp CATTTCCTATGTGATTACTTCCGGGTCCTCTTGGAGAACAGAGCATTTTGCCTCATACCCAACACCAAGTaGCCGGGCCTCATTTTCCCG +
Preference number: 5 (lower is better)
Translates to: HFLCDYFRVLLENRAFCLIPNTK*PGLIFP
Trigger: CGGGAAAATGAGGCCCGGCAACTTGGTGTTGGGTAT...GAGGCAAAATGCTCTGTTCTCCAAGAGGACCCGGAAGTAATCACATAGGAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383794.7
CDS GCA 90 bp GATCTCTCCCTCAGGAAGGTTTTCCTCATCGTCGTCCCTTTCTCCTaGCTTTTGAGAATCTCTATGGGCACCAGATGCCTCCATTTCTTT +
Preference number: 5 (lower is better)
Translates to: DLSLRKVFLIVVPFS*LLRISMGTRCLHFF
Trigger: AAAGAAATGGAGGCATCTGGTGCCCATAGAGATTCTCAAAAGGCAGGAGAAAGGGACGACGATGAGGAAAACCTTCCTGAGGGAGAGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000463438.5
ENST00000465759.1
CDS-3UTR CAA 90 bp CTTCAGAGAACAAGGACTTGTGCTACTGTATTCTCACAGCACTCACTGGCCTGGACAATGACTTCTACTTaGCTACTCTGGGCAGCAGGA +
Preference number: 5 (lower is better)
Translates to: LQRTRTCATVFSQHSLAWTMTST*LLWAAG
Trigger: TCCTGCTGCCCAGAGTAGCAAAGTAGAAGTCATTGT...CCAGGCCAGTGAGTGCTGTGAGAATACAGTAGCACAAGTCCTTGTTCTCTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CAA 90 bp CTTGACAGGGAGAAATTCCTCGTGACCTATGGTCCATCGGCTGATCTGGAAGCTCCAAGTCAGCGTGCTTaGAAAGATCATGTCACTTGT +
Preference number: 5 (lower is better)
Translates to: LDREKFLVTYGPSADLEAPSQRA*KDHVTC
Trigger: ACAAGTGACATGATCTTTCAAAGCACGCTGACTTGG...AGCTTCCAGATCAGCCGATGGACCATAGGTCACGAGGAATTTCTCCCTGTCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CAA 90 bp CCACTTCTACCTTTCTGGACTACGAAGAGCTCCTCCTGGTCTTCCTTATCATTTCCTTTCTCCTGCCTTTaGAGAATCTCTATGGGCACC +
Preference number: 5 (lower is better)
Translates to: PLLPFWTTKSSSWSSLSFPFSCL*RISMGT
Trigger: GGTGCCCATAGAGATTCTCAAAAGGCAGGAGAAAGG...AAATGATAAGGAAGACCAGGAGGAGCTCTTCGTAGTCCAGAAAGGTAGAAGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303688.8
ENST00000383794.7
CDS-3UTR CAA 90 bp CCTGGTCTTCCTTATCATTTCCTATGTGATTACTTCCGGGTCCTCTTGGAGAACTCAACTCTCAACTGCTaGTGTGCAGCTGTAGGAACC +
Preference number: 5 (lower is better)
Translates to: PGLPYHFLCDYFRVLLENSTLNC*CAAVGT
Trigger: GGTTCCTACAGCTGCACACAAGCAGTTGAGAGTTGA...GTTCTCCAAGAGGACCCGGAAGTAATCACATAGGAAATGATAAGGAAGACCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CAA 90 bp ACCCTGCACAAGTCATCGACCCCTCCACACTCCAGTGTGTCATCTGTAATGAGGGATGTTTGTCTAAGATaGCTTGATACTAGGGCAACA +
Preference number: 5 (lower is better)
Translates to: TLHKSSTPPHSSVSSVMRDVCLR*LDTRAT
Trigger: TGTTGCCCTAGTATCAAGCAATCTTAGACAAACATC...CCTCATTACAGATGACACACTGGAGTGTGGAGGGGTCGATGACTTGTGCAGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS GCA 90 bp GTCGTCCCTTTCTCCTGCCTTTTGAGAATCTCTATGGGCACCAGATaGCTCCATTTCTTTGCGCTTGTCTATGATCTTCTGTGTGAAATC +
Preference number: 5 (lower is better)
Translates to: VVPFSCLLRISMGTR*LHFFALVYDLLCEI
Trigger: GATTTCACACAGAAGATCATAGACAAGCGCAAAGAAATGGAGGCATCTGGTGCCCATAGAGATTCTCAAAAGGCAGGAGAAAGGGACGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000463438.5
ENST00000465759.1
CDS-3UTR CAA 90 bp TCCTATGTGATTACTTCCGGGTCCTCTTGGAGAACAGAGCATTTTGCCTCCCATACGCCTACATTCTGTTaGCTCCAGATACTTGGTTTC +
Preference number: 5 (lower is better)
Translates to: SYVITSGSSWRTEHFASHTPTFC*LQILGF
Trigger: GAAACCAAGTATCTGGAGCAAACAGAATGTAGGCGT...ATGGGAGGCAAAATGCTCTGTTCTCCAAGAGGACCCGGAAGTAATCACATAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CAA 90 bp CTTCAGAGAACAAGGACTTGTGCTACTGTATTCTCACAGCACTCACTGGCCTGGTCCATTTCTTTGCGCTaGTCTATGATCTTCTGTGTG +
Preference number: 5 (lower is better)
Translates to: LQRTRTCATVFSQHSLAWSISLR*SMIFCV
Trigger: CACACAGAAGATCATAGACAAGCGCAAAGAAATGGA...CCAGGCCAGTGAGTGCTGTGAGAATACAGTAGCACAAGTCCTTGTTCTCTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CAA 90 bp TCCTATGTGATTACTTCCGGGTCCTCTTGGAGAACAGAGCATTTTGCCTCCCATGATGCCTCCATTTCTTaGCGCTTGTCTATGATCTTC +
Preference number: 5 (lower is better)
Translates to: SYVITSGSSWRTEHFASHDASIS*RLSMIF
Trigger: GAAGATCATAGACAAGCGCAAAGAAATGGAGGCATC...ATGGGAGGCAAAATGCTCTGTTCTCCAAGAGGACCCGGAAGTAATCACATAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CAA 90 bp CATTTCCTATGTGATTACTTCCGGGTCCTCTTGGAGAACAGAGCATTTTGCCTCACAATGACTTCTACTTaGCTACTCTGGGCAGCAGGA +
Preference number: 5 (lower is better)
Translates to: HFLCDYFRVLLENRAFCLTMTST*LLWAAG
Trigger: TCCTGCTGCCCAGAGTAGCAAAGTAGAAGTCATTGT...GAGGCAAAATGCTCTGTTCTCCAAGAGGACCCGGAAGTAATCACATAGGAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CAA 90 bp TCCCACTTCTACCTTTCTGGACTACGAAGAGCTCCTCCTGGTCTTCCTTATCATCCAAGTCAGCGTGCTTaGAAAGATCATGTCACTTGT +
Preference number: 5 (lower is better)
Translates to: SHFYLSGLRRAPPGLPYHPSQRA*KDHVTC
Trigger: ACAAGTGACATGATCTTTCAAAGCACGCTGACTTGG...ATGATAAGGAAGACCAGGAGGAGCTCTTCGTAGTCCAGAAAGGTAGAAGTGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CAA 90 bp TTCTATCGCAGCTCACATGTAAATCCAGGTAGGTATGTCCCTATCCCACTTAGAGCAGTTTTCCACTGCTaGACAGGGAGAAATTCCTCG +
Preference number: 5 (lower is better)
Translates to: FYRSSHVNPGRYVPIPLRAVFHC*TGRNSS
Trigger: CGAGGAATTTCTCCCTGTCAAGCAGTGGAAAACTGC...TCTAAGTGGGATAGGGACATACCTACCTGGATTTACATGTGAGCTGCGATAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CAA 90 bp TCCTATGTGATTACTTCCGGGTCCTCTTGGAGAACAGAGCATTTTGCCTCCCATTTGTTCTCTGATCTGTaGTCTGTTCACGCAGCATCT +
Preference number: 5 (lower is better)
Translates to: SYVITSGSSWRTEHFASHLFSDL*SVHAAS
Trigger: AGATGCTGCGTGAACAGACAACAGATCAGAGAACAA...ATGGGAGGCAAAATGCTCTGTTCTCCAAGAGGACCCGGAAGTAATCACATAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383794.7
CDS GCA 90 bp CATCGTCGTTTCTCCTGCCTTTTGAGAATCTCTATGGGCACCAGATaGCTCCATTTCTTTGCGCTTGTCTATGATCTTCTGTGTGAAATC +
Preference number: 5 (lower is better)
Translates to: HRRFSCLLRISMGTR*LHFFALVYDLLCEI
Trigger: GATTTCACACAGAAGATCATAGACAAGCGCAAAGAAATGGAGGCATCTGGTGCCCATAGAGATTCTCAAAAGGCAGGAGAAACGACGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611584.4
CDS-3UTR CAA 90 bp GTTATTTCTCCCTCTGGGAGAGAAAGGCACTGTCAAAGTACAAACCCAAGTCAGACGCCTACATTCTGTTaGCTCCAGATACTTGGTTTC +
Preference number: 5 (lower is better)
Translates to: VISPSGRERHCQSTNPSQTPTFC*LQILGF
Trigger: GAAACCAAGTATCTGGAGCAAACAGAATGTAGGCGT...CTGACTTGGGTTTGTACTTTGACAGTGCCTTTCTCTCCCAGAGGGAGAAATAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CAA 90 bp TTATTTCTCCCTCTGGGAGAGAAAGGCACTGTCAAAGTACAAACCCAAGTCAGCACGCCTACATTCTGTTaGCTCCAGATACTTGGTTTC +
Preference number: 5 (lower is better)
Translates to: LFLPLGEKGTVKVQTQVSTPTFC*LQILGF
Trigger: GAAACCAAGTATCTGGAGCAAACAGAATGTAGGCGT...GCTGACTTGGGTTTGTACTTTGACAGTGCCTTTCTCTCCCAGAGGGAGAAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CAA 90 bp TCCCACTTCTACCTTTCTGGACTACGAAGAGCTCCTCCTGGTCTTCCTTATCATTCAGAGAACAAGGACTaGTGCTACTGTATTCTCACA +
Preference number: 5 (lower is better)
Translates to: SHFYLSGLRRAPPGLPYHSENKD*CYCILT
Trigger: TGTGAGAATACAGTAGCACAAGTCCTTGTTCTCTGA...ATGATAAGGAAGACCAGGAGGAGCTCTTCGTAGTCCAGAAAGGTAGAAGTGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CAA 90 bp CTTCAGAGAACAAGGACTTGTGCTACTGTATTCTCACAGCACTCACTGGCCTGGGATGTTTGTCTAAGATaGCTTGATACTAGGGCAACA +
Preference number: 5 (lower is better)
Translates to: LQRTRTCATVFSQHSLAWDVCLR*LDTRAT
Trigger: TGTTGCCCTAGTATCAAGCAATCTTAGACAAACATC...CCAGGCCAGTGAGTGCTGTGAGAATACAGTAGCACAAGTCCTTGTTCTCTGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CAA 90 bp TTCTATCGCAGCTCACATGTAAATCCAGGTAGGTATGTCCCTATCCCACTTAGACCAAGTCAGCGTGCTTaGAAAGATCATGTCACTTGT +
Preference number: 5 (lower is better)
Translates to: FYRSSHVNPGRYVPIPLRPSQRA*KDHVTC
Trigger: ACAAGTGACATGATCTTTCAAAGCACGCTGACTTGG...TCTAAGTGGGATAGGGACATACCTACCTGGATTTACATGTGAGCTGCGATAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CAA 90 bp GTTATTTCTCCCTCTGGGAGAGAAAGGCACTGTCAAAGTACAAACCCAAGTCAGTCAGAGAACAAGGACTaGTGCTACTGTATTCTCACA +
Preference number: 5 (lower is better)
Translates to: VISPSGRERHCQSTNPSQSENKD*CYCILT
Trigger: TGTGAGAATACAGTAGCACAAGTCCTTGTTCTCTGA...CTGACTTGGGTTTGTACTTTGACAGTGCCTTTCTCTCCCAGAGGGAGAAATAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CAA 90 bp TCCCACTTCTACCTTTCTGGACTACGAAGAGCTCCTCCTGGTCTTCCTTATCATGATGTTTGTCTAAGATaGCTTGATACTAGGGCAACA +
Preference number: 5 (lower is better)
Translates to: SHFYLSGLRRAPPGLPYHDVCLR*LDTRAT
Trigger: TGTTGCCCTAGTATCAAGCAATCTTAGACAAACATC...ATGATAAGGAAGACCAGGAGGAGCTCTTCGTAGTCCAGAAAGGTAGAAGTGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CAA 90 bp CCTAAAGTTATTTCTCCCTCTGGGAGAGAAAGGCACTGTCAAAGTACAAACCCATCCATTTCTTTGCGCTaGTCTATGATCTTCTGTGTG +
Preference number: 5 (lower is better)
Translates to: PKVISPSGRERHCQSTNPSISLR*SMIFCV
Trigger: CACACAGAAGATCATAGACAAGCGCAAAGAAATGGA...TGGGTTTGTACTTTGACAGTGCCTTTCTCTCCCAGAGGGAGAAATAACTTTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CAA 90 bp CCTAAAGTTATTTCTCCCTCTGGGAGAGAAAGGCACTGTCAAAGTACAAACCCATCAGAGAACAAGGACTaGTGCTACTGTATTCTCACA +
Preference number: 5 (lower is better)
Translates to: PKVISPSGRERHCQSTNPSENKD*CYCILT
Trigger: TGTGAGAATACAGTAGCACAAGTCCTTGTTCTCTGA...TGGGTTTGTACTTTGACAGTGCCTTTCTCTCCCAGAGGGAGAAATAACTTTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CAA 90 bp CCTGGTCTTCCTTATCATTTCCTATGTGATTACTTCCGGGTCCTCTTGGAGAACGGGGTTAGACATCAATaGTGTTTAAGTCTGAGATCT +
Preference number: 5 (lower is better)
Translates to: PGLPYHFLCDYFRVLLENGVRHQ*CLSLRS
Trigger: AGATCTCAGACTTAAACACAATTGATGTCTAACCCC...GTTCTCCAAGAGGACCCGGAAGTAATCACATAGGAAATGATAAGGAAGACCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CAA 90 bp GTTATTTCTCCCTCTGGGAGAGAAAGGCACTGTCAAAGTACAAACCCAAGTCAGCTTCCAATTTTTCCCTaGCTTTGTCTAAAGTCTTCT +
Preference number: 5 (lower is better)
Translates to: VISPSGRERHCQSTNPSQLPIFP*LCLKSS
Trigger: AGAAGACTTTAGACAAAGCAAGGGAAAAATTGGAAG...CTGACTTGGGTTTGTACTTTGACAGTGCCTTTCTCTCCCAGAGGGAGAAATAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CAA 90 bp CCTGGTCTTCCTTATCATTTCCTATGTGATTACTTCCGGGTCCTCTTGGAGAACCTTCCAATTTTTCCCTaGCTTTGTCTAAAGTCTTCT +
Preference number: 5 (lower is better)
Translates to: PGLPYHFLCDYFRVLLENLPIFP*LCLKSS
Trigger: AGAAGACTTTAGACAAAGCAAGGGAAAAATTGGAAG...GTTCTCCAAGAGGACCCGGAAGTAATCACATAGGAAATGATAAGGAAGACCAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS-3UTR CAA 90 bp TTCTATCGCAGCTCACATGTAAATCCAGGTAGGTATGTCCCTATCCCACTTAGAGGGGTTAGACATCAATaGTGTTTAAGTCTGAGATCT +
Preference number: 5 (lower is better)
Translates to: FYRSSHVNPGRYVPIPLRGVRHQ*CLSLRS
Trigger: AGATCTCAGACTTAAACACAATTGATGTCTAACCCC...TCTAAGTGGGATAGGGACATACCTACCTGGATTTACATGTGAGCTGCGATAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS TCA 90 bp CTTCTGTTCTTCAATCTTCTGTTCAGCATCCTTCTCAGCTCGATTTaGAACGCCTACATTCTGTTTGCTCCAGATACTTGGTTTCTTGTT +
Preference number: 5 (lower is better)
Translates to: LLFFNLLFSILLSSI*NAYILFAPDTWFLV
Trigger: AACAAGAAACCAAGTATCTGGAGCAAACAGAATGTAGGCGTTTCAAATCGAGCTGAGAAGGATGCTGAACAGAAGATTGAAGAACAGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000463438.5
ENST00000465759.1
ENST00000611584.4
CDS-3UTR CAA 90 bp CCTAAAGTTATTTCTCCCTCTGGGAGAGAAAGGCACTGTCAAAGTACAAACCCACTTCCAATTTTTCCCTaGCTTTGTCTAAAGTCTTCT +
Preference number: 5 (lower is better)
Translates to: PKVISPSGRERHCQSTNPLPIFP*LCLKSS
Trigger: AGAAGACTTTAGACAAAGCAAGGGAAAAATTGGAAG...TGGGTTTGTACTTTGACAGTGCCTTTCTCTCCCAGAGGGAGAAATAACTTTAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000611584.4
CDS CCA 72 bp AGCAGGACGTGGGGTTGGCACAGCCTCTGGCTCCGGTaGCAAAGGCCCAATAACATCTCCATCATTTTCCCG +
Preference number: 6 (lower is better)
Translates to: SRTWGWHSLWLR*QRPNNISIIFP
Trigger: CGGGAAAATGATGGAGATGTTATTGGGCCTTTGCCACCGGAGCCAGAGGCTGTGCCAACCCCACGTCCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303688.8
ENST00000611584.4
CDS CCA 72 bp AATGACTTCTACTTTGCTACTCTGGGCAGCAGGACGTaGGGTTGGCACAGCCTCTGGCTCCGGTGGCAAAGG +
Preference number: 6 (lower is better)
Translates to: NDFYFATLGSRT*GWHSLWLRWQR
Trigger: CCTTTGCCACCGGAGCCAGAGGCTGTGCCAACCCCACGTCCTGCTGCCCAGAGTAGCAAAGTAGAAGTCATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000476763.1
ENST00000611584.4
CDS CCA 72 bp TTCCTCTCCTGGACAATGACTTCTACTTTGCTACTCTaGGCAGCAGGACGTGGGGTTGGCACAGCCTCTGGC +
Preference number: 6 (lower is better)
Translates to: FLSWTMTSTLLL*AAGRGVGTASG
Trigger: GCCAGAGGCTGTGCCAACCCCACGTCCTGCTGCCCAGAGTAGCAAAGTAGAAGTCATTGTCCAGGAGAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000476763.1
ENST00000611584.4
CDS CAA 90 bp AATTCTTTTCCGCGGTCCCACTCCCGGATGTGTGGCACTCCAGGCTaGGTGTCCTTCCTCTCCTGGACAATGACTTCTACTTTGCTACTC +
Preference number: 6 (lower is better)
Translates to: NSFPRSHSRMCGTPG*VSFLSWTMTSTLLL
Trigger: GAGTAGCAAAGTAGAAGTCATTGTCCAGGAGAGGAAGGACACCAAGCCTGGAGTGCCACACATCCGGGAGTGGGACCGCGGAAAAGAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000476763.1
ENST00000611584.4
CDS GCA 72 bp CTCAGGAAGGTTTTCCTCATCGTCGTCCCTTTCTCCTaGCTTTTGAGAATCTCTATGGGCACCAGATGCCTC +
Preference number: 6 (lower is better)
Translates to: LRKVFLIVVPFS*LLRISMGTRCL
Trigger: GAGGCATCTGGTGCCCATAGAGATTCTCAAAAGGCAGGAGAAAGGGACGACGATGAGGAAAACCTTCCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000463438.5
ENST00000465759.1
CDS CCA 72 bp ATCCATGATGTTACCAACCATTCTTCACTGGGGTCTTaGGGAGGAGGGATCTCTCCCTCAGGAAGGTTTTCC +
Preference number: 6 (lower is better)
Translates to: IHDVTNHSSLGS*GGGISPSGRFS
Trigger: GGAAAACCTTCCTGAGGGAGAGATCCCTCCTCCCCAAGACCCCAGTGAAGAATGGTTGGTAACATCATGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463438.5
CDS CAA 72 bp CATGGGCTGTCTCCACTTCTCTCAGGGAACAATCCCTaGGATTACCAGACCCTCTGTCAGGAAGATATTCCC +
Preference number: 6 (lower is better)
Translates to: HGLSPLLSGNNP*DYQTLCQEDIP
Trigger: GGGAATATCTTCCTGACAGAGGGTCTGGTAATCCAAGGGATTGTTCCCTGAGAGAAGTGGAGACAGCCCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465759.1
CDS CAA 90 bp TCCCTCAGGAAGGTTTTCCTCATCGTCGTCCCTTTCTCCTGCCTTTaGAGAATCTCTATGGGCACCAGATGCCTCCATTTCTTTGCGCTT +
Preference number: 6 (lower is better)
Translates to: SLRKVFLIVVPFSCL*RISMGTRCLHFFAL
Trigger: AAGCGCAAAGAAATGGAGGCATCTGGTGCCCATAGAGATTCTCAAAAGGCAGGAGAAAGGGACGACGATGAGGAAAACCTTCCTGAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000463438.5
ENST00000465759.1
CDS CCA 72 bp ATGGGCTGTCTCCACTTCTCTCAGGGAACAATCCCTTaGATTACCAGACCCTCTGTCAGGAAGATATTCCCA +
Preference number: 6 (lower is better)
Translates to: MGCLHFSQGTIP*ITRPSVRKIFP
Trigger: TGGGAATATCTTCCTGACAGAGGGTCTGGTAATCCAAGGGATTGTTCCCTGAGAGAAGTGGAGACAGCCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465759.1
CDS CAA 90 bp TCACGCAGCATCTCTAAGGTTTTCATCTGCTTGTTTCTCAACTCTTaGTCTCGGGCAAAGGCAAAATACCCAACACCAAGTTGCCGGGCC +
Preference number: 6 (lower is better)
Translates to: SRSISKVFICLFLNS*SRAKAKYPTPSCRA
Trigger: GGCCCGGCAACTTGGTGTTGGGTATTTTGCCTTTGCCCGAGACAAAGAGTTGAGAAACAAGCAGATGAAAACCTTAGAGATGCTGCGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383794.7
CDS CAA 72 bp AAGGTTTTCCTCATCGTCGTCCCTTTCTCCTGCCTTTaGAGAATCTCTATGGGCACCAGATGCCTCCATTTC +
Preference number: 6 (lower is better)
Translates to: KVFLIVVPFSCL*RISMGTRCLHF
Trigger: GAAATGGAGGCATCTGGTGCCCATAGAGATTCTCAAAAGGCAGGAGAAAGGGACGACGATGAGGAAAACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000463438.5
ENST00000465759.1
CDS CAA 72 bp CAGGAAGGTTTTCCTCATCGTCGTTTCTCCTGCCTTTaGAGAATCTCTATGGGCACCAGATGCCTCCATTTC +
Preference number: 6 (lower is better)
Translates to: QEGFPHRRFSCL*RISMGTRCLHF
Trigger: GAAATGGAGGCATCTGGTGCCCATAGAGATTCTCAAAAGGCAGGAGAAACGACGATGAGGAAAACCTTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611584.4
CDS TCA 72 bp AGGAAGGTTTTCCTCATCGTCGTTTCTCCTGCCTTTTaGGAATCTCTATGGGCACCAGATGCCTCCATTTCT +
Preference number: 6 (lower is better)
Translates to: RKVFLIVVSPAF*ESLWAPDASIS
Trigger: AGAAATGGAGGCATCTGGTGCCCATAGAGATTCTCAAAAGGCAGGAGAAACGACGATGAGGAAAACCTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611584.4
CDS TCA 72 bp CCCAACAAAATCACTCCCAAAATGTCAGCGCAAGTCTaGGGATGTTCCTCTGAGCTAATCCATGATGTTACC +
Preference number: 6 (lower is better)
Translates to: PNKITPKMSAQV*GCSSELIHDVT
Trigger: GGTAACATCATGGATTAGCTCAGAGGAACATCCTCAGACTTGCGCTGACATTTTGGGAGTGATTTTGTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463438.5
CDS GCA 72 bp TTCTCCTGCCTTTTGAGAATCTCTATGGGCACCAGATaGCTCCATTTCTTTGCGCTTGTCTATGATCTTCTG +
Preference number: 6 (lower is better)
Translates to: FSCLLRISMGTR*LHFFALVYDLL
Trigger: CAGAAGATCATAGACAAGCGCAAAGAAATGGAGGCATCTGGTGCCCATAGAGATTCTCAAAAGGCAGGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000463438.5
ENST00000465759.1
ENST00000611584.4
CDS CAA 72 bp TCTCTATGGGCACCAGATGCCTCCATTTCTTTGCGCTaGTCTATGATCTTCTGTGTGAAATCCACAAGGTAC +
Preference number: 6 (lower is better)
Translates to: SLWAPDASISLR*SMIFCVKSTRY
Trigger: GTACCTTGTGGATTTCACACAGAAGATCATAGACAAGCGCAAAGAAATGGAGGCATCTGGTGCCCATAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000463438.5
ENST00000465759.1
ENST00000611584.4
CDS TCA 72 bp TTCAATCTTCTGTTCAGCATCCTTCTCAGCTCGATTTaGAACGCCTACATTCTGTTTGCTCCAGATACTTGG +
Preference number: 6 (lower is better)
Translates to: FNLLFSILLSSI*NAYILFAPDTW
Trigger: CCAAGTATCTGGAGCAAACAGAATGTAGGCGTTTCAAATCGAGCTGAGAAGGATGCTGAACAGAAGATTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000463438.5
ENST00000465759.1
ENST00000611584.4
CDS CAA 72 bp CTTCAATCTTCTGTTCAGCATCCTTCTCAGCTCGATTaGAAACGCCTACATTCTGTTTGCTCCAGATACTTG +
Preference number: 6 (lower is better)
Translates to: LQSSVQHPSQLD*KRLHSVCSRYL
Trigger: CAAGTATCTGGAGCAAACAGAATGTAGGCGTTTCAAATCGAGCTGAGAAGGATGCTGAACAGAAGATTGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000463438.5
ENST00000465759.1
ENST00000611584.4
CDS CAA 72 bp ATCTCTAAGGTTTTCATCTGCTTGTTTCTCAACTCTTaGTCTCGGGCAAAGGCAAAATACCCAACACCAAGT +
Preference number: 6 (lower is better)
Translates to: ISKVFICLFLNS*SRAKAKYPTPS
Trigger: ACTTGGTGTTGGGTATTTTGCCTTTGCCCGAGACAAAGAGTTGAGAAACAAGCAGATGAAAACCTTAGAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383794.7
CDS CAA 90 bp TCTTCTGTTCTTCAATCTTCTGTTCAGCATCCTTCTCAGCTCGATTaGAAACGCCTACATTCTGTTTGCTCCAGATACTTGGTTTCTTGT +
Preference number: 6 (lower is better)
Translates to: SSVLQSSVQHPSQLD*KRLHSVCSRYLVSC
Trigger: ACAAGAAACCAAGTATCTGGAGCAAACAGAATGTAGGCGTTTCAAATCGAGCTGAGAAGGATGCTGAACAGAAGATTGAAGAACAGAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000463438.5
ENST00000465759.1
ENST00000611584.4
CDS CAA 72 bp TCCTTCTCAGCTCGATTTGAAACGCCTACATTCTGTTaGCTCCAGATACTTGGTTTCTTGTTAGTTGTTTTT +
Preference number: 6 (lower is better)
Translates to: SFSARFETPTFC*LQILGFLLVVF
Trigger: AAAAACAACTAACAAGAAACCAAGTATCTGGAGCAAACAGAATGTAGGCGTTTCAAATCGAGCTGAGAAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303688.8
ENST00000383794.7
ENST00000463438.5
ENST00000465759.1
ENST00000611584.4