RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CCDC169 (Homo sapiens)

Ensembl gene IDs: ENSG00000242715

Ensembl transcript IDs: ENST00000239859.8, ENST00000239860.10, ENST00000379862.6, ENST00000379864.6, ENST00000471781.5, ENST00000477250.1, ENST00000479850.6, ENST00000485600.1, ENST00000486683.5, ENST00000491049.6, ENST00000503173.5, ENST00000506800.5, ENST00000510088.5

Found 204 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGCAGGGTAGGGGATCCCAAACAAAGCATGGTGGTTTCATGTAGTTaGGAAGACAGAGGCTGGAGTTCAGGGAGGCTGAAGTGGCTGAAG +
Preference number: 1 (lower is better)
Translates to: SRVGDPKQSMVVSCS*EDRGWSSGRLKWLK
Trigger: CTTCAGCCACTTCAGCCTCCCTGAACTCCAGCCTCTGTCTTCTCAACTACATGAAACCACCATGCTTTGTTTGGGATCCCCTACCCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379864.6
3UTR TCA 90 bp CACTGGGGACCACTAGAGGGTGGAGGAAGAAAGGAGAGCAAACATTaGCAAATAACTTTCGGCTACTATGCTCAGTCCCTGGGTGATGGG +
Preference number: 1 (lower is better)
Translates to: HWGPLEGGGRKESKH*QITFGYYAQSLGDG
Trigger: CCCATCACCCAGGGACTGAGCATAGTAGCCGAAAGTTATTTGTCAATGTTTGCTCTCCTTTCTTCCTCCACCCTCTAGTGGTCCCCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379864.6
3UTR TCA 90 bp ATAGTAAAGATACAGAATCAGCCTAGGTGCCCATCAACAGTGGACTaGGTAAAGAAAATGTGCTACATATACACCAGCAGTTCCCAACCC +
Preference number: 1 (lower is better)
Translates to: IVKIQNQPRCPSTVD*VKKMCYIYTSSSQP
Trigger: GGGTTGGGAACTGCTGGTGTATATGTAGCACATTTTCTTTACTCAGTCCACTGTTGATGGGCACCTAGGCTGATTCTGTATCTTTACTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379864.6
3UTR CCA 90 bp AAACCAAATACTGCATGTTCTCGCTTACAAGTGATAGCCAAACACTaGGTACTCATGGACATAAAGACAGCAACAATAGACACTGGGGAC +
Preference number: 1 (lower is better)
Translates to: KPNTACSRLQVIAKH*VLMDIKTATIDTGD
Trigger: GTCCCCAGTGTCTATTGTTGCTGTCTTTATGTCCATGAGTACCCAGTGTTTGGCTATCACTTGTAAGCGAGAACATGCAGTATTTGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379864.6
3UTR GCA 90 bp ATGTCCTTTGTAACAATATGGATGCAGCTGGAGGCCATTTTCCTATaGAAATTAACACAGAAGCAGGAAACCAAATACTGCATGTTCTCG +
Preference number: 1 (lower is better)
Translates to: MSFVTIWMQLEAIFL*KLTQKQETKYCMFS
Trigger: CGAGAACATGCAGTATTTGGTTTCCTGCTTCTGTGTTAATTTGCATAGGAAAATGGCCTCCAGCTGCATCCATATTGTTACAAAGGACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379864.6
3UTR TCA 90 bp CAAACATTGACAAATAACTTTCGGCTACTATGCTCAGTCCCTGGGTaGTGGGATTATTTGTGCCCCAAATCTCAGCATTATACAATATAC +
Preference number: 1 (lower is better)
Translates to: QTLTNNFRLLCSVPG*WDYLCPKSQHYTIY
Trigger: GTATATTGTATAATGCTGAGATTTGGGGCACAAATAATCCCATCACCCAGGGACTGAGCATAGTAGCCGAAAGTTATTTGTCAATGTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379864.6
3UTR CCA 90 bp CTACACAGTCATAAAAGAAATGAAATCATGTCCTTTGTAACAATATaGATGCAGCTGGAGGCCATTTTCCTATGCAAATTAACACAGAAG +
Preference number: 1 (lower is better)
Translates to: LHSHKRNEIMSFVTI*MQLEAIFLCKLTQK
Trigger: CTTCTGTGTTAATTTGCATAGGAAAATGGCCTCCAGCTGCATCCATATTGTTACAAAGGACATGATTTCATTTCTTTTATGACTGTGTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379864.6
3UTR-3UTR TCA 90 bp GCACAGACCTCAGAGCAGGGTAGGGGATCCCAAACAAAGCATGGTGGTTTCATGAGCCTCCCAAGCAGCTaGGACCATAGGCATGCACCA +
Preference number: 2 (lower is better)
Translates to: AQTSEQGRGSQTKHGGFMSLPSS*DHRHAP
Trigger: TGGTGCATGCCTATGGTCTCAGCTGCTTGGGAGGCT...CATGAAACCACCATGCTTTGTTTGGGATCCCCTACCCTGCTCTGAGGTCTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379864.6
3UTR-3UTR TCA 90 bp AGGACCCATGTAAGCAGGCGGGCCAGAGTGCTTTTTGTCCGAGGCATGTCCTATCCACACCTGCAGCACTaGAACCCAATGTCTCCAAGC +
Preference number: 2 (lower is better)
Translates to: RTHVSRRARVLFVRGMSYPHLQH*NPMSPS
Trigger: GCTTGGAGACATTGGGTTTCAGTGCTGCAGGTGTGG...ATAGGACATGCCTCGGACAAAAAGCACTCTGGCCCGCCTGCTTACATGGGTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506800.5
3UTR-3UTR CCA 90 bp GCACAGACCTCAGAGCAGGGTAGGGGATCCCAAACAAAGCATGGTGGTTTCATGCAGCTCACCTCCTGCTaGGCAGCCCAATTCCTAACA +
Preference number: 2 (lower is better)
Translates to: AQTSEQGRGSQTKHGGFMQLTSC*AAQFLT
Trigger: TGTTAGGAATTGGGCTGCCCAGCAGGAGGTGAGCTG...CATGAAACCACCATGCTTTGTTTGGGATCCCCTACCCTGCTCTGAGGTCTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379864.6
3UTR-3UTR TCA 90 bp GCACAGACCTCAGAGCAGGGTAGGGGATCCCAAACAAAGCATGGTGGTTTCATGTTAAGTGTAGTGGCATaGTCACAGCTCACTGCAGCC +
Preference number: 2 (lower is better)
Translates to: AQTSEQGRGSQTKHGGFMLSVVA*SQLTAA
Trigger: GGCTGCAGTGAGCTGTGATCATGCCACTACACTTAA...CATGAAACCACCATGCTTTGTTTGGGATCCCCTACCCTGCTCTGAGGTCTGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379864.6
3UTR-3UTR GCA 90 bp GAGTATTTTACTTTTAGCTCTTCAGGTGAGTCTGACACACAGCCAAGGTTGAGGGCAGGCGGGCCAGAGTaGTTTTTGTCCGAGGCATGT +
Preference number: 2 (lower is better)
Translates to: EYFTFSSSGESDTQPRLRAGGPE*FLSEAC
Trigger: ACATGCCTCGGACAAAAAGCACTCTGGCCCGCCTGC...CCTCAACCTTGGCTGTGTGTCAGACTCACCTGAAGAGCTAAAAGTAAAATACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000506800.5
3UTR-3UTR GCA 90 bp GCACAGACCTCAGAGCAGGGTAGGGGATCCCAAACAAAGCATGGTGGTTTCATGAGGGTTTCATTCAGTTaGCTAGCCTTAAGTGTAGTG +
Preference number: 2 (lower is better)
Translates to: AQTSEQGRGSQTKHGGFMRVSFS*LALSVV
Trigger: CACTACACTTAAGGCTAGGCAACTGAATGAAACCCT...CATGAAACCACCATGCTTTGTTTGGGATCCCCTACCCTGCTCTGAGGTCTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379864.6
3UTR-3UTR GCA 90 bp ACTTTTAGCTCTTCAGGTGAGTCTGACACACAGCCAAGGTTGAGGACCCATGTATCCCTCAGGTTCTTTTaGTCCAGGGTACCAATGGCT +
Preference number: 2 (lower is better)
Translates to: TFSSSGESDTQPRLRTHVSLRFF*SRVPMA
Trigger: AGCCATTGGTACCCTGGAGCAAAAGAACCTGAGGGA...TACATGGGTCCTCAACCTTGGCTGTGTGTCAGACTCACCTGAAGAGCTAAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506800.5
3UTR-3UTR GCA 90 bp GTGCACATGTCTGAGTATTTTACTTTTAGCTCTTCAGGTGAGTCTGACACACAGTGGTCCAGCCACACCTaGAGCACTGAAACCCAATGT +
Preference number: 2 (lower is better)
Translates to: VHMSEYFTFSSSGESDTQWSSHT*STETQC
Trigger: ACATTGGGTTTCAGTGCTGCAGGTGTGGCTGGACCA...CTGTGTGTCAGACTCACCTGAAGAGCTAAAAGTAAAATACTCAGACATGTGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506800.5
3UTR-3UTR CCA 90 bp AGAAGGCACACTGACAGCAATCAAATACACACCTCCACCACTGCAGGAATCCTTGGGAGGGGATGGTTTTaGGATGAAACTGTTTCAGAT +
Preference number: 2 (lower is better)
Translates to: RRHTDSNQIHTSTTAGILGRGWF*DETVSD
Trigger: ATCTGAAACAGTTTCATCCCAAAACCATCCCCTCCC...AAGGATTCCTGCAGTGGTGGAGGTGTGTATTTGATTGCTGTCAGTGTGCCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379864.6
3UTR-3UTR TCA 90 bp AGAAGGCACACTGACAGCAATCAAATACACACCTCCACCACTGCAGGAATCCTTAAGGAGAGCAAACATTaGCAAATAACTTTCGGCTAC +
Preference number: 2 (lower is better)
Translates to: RRHTDSNQIHTSTTAGILKESKH*QITFGY
Trigger: GTAGCCGAAAGTTATTTGTCAATGTTTGCTCTCCTT...AAGGATTCCTGCAGTGGTGGAGGTGTGTATTTGATTGCTGTCAGTGTGCCTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379864.6
3UTR-3UTR CCA 90 bp AATCCTTCGTATACTATTCCTGAGGAATGGTCACCTAATCTCTGCTTAAGCAATACTAGGCCTGGCCCCTaGAAACACCATTCTGGATGT +
Preference number: 2 (lower is better)
Translates to: NPSYTIPEEWSPNLCLSNTRPGP*KHHSGC
Trigger: ACATCCAGAATGGTGTTTCCAGGGGCCAGGCCTAGT...ATTGCTTAAGCAGAGATTAGGTGACCATTCCTCAGGAATAGTATACGAAGGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379864.6
3UTR-3UTR GCA 90 bp ATGCACTTGCATGTTCATCGCAGCACTATTCACAATAGTAAAGATACAGAATCATCAGGTGGTAATGCTTaGTCACCTGCAGCTCACCTC +
Preference number: 2 (lower is better)
Translates to: MHLHVHRSTIHNSKDTESSGGNA*SPAAHL
Trigger: GAGGTGAGCTGCAGGTGAGCAAGCATTACCACCTGA...TGATTCTGTATCTTTACTATTGTGAATAGTGCTGCGATGAACATGCAAGTGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379864.6
3UTR-3UTR TCA 90 bp AATCCTTCGTATACTATTCCTGAGGAATGGTCACCTAATCTCTGCTTAAGCAATCCATATACAGAAGGATaGAACTGGACCCCTACCTTT +
Preference number: 2 (lower is better)
Translates to: NPSYTIPEEWSPNLCLSNPYTEG*NWTPTF
Trigger: AAAGGTAGGGGTCCAGTTTCATCCTTCTGTATATGG...ATTGCTTAAGCAGAGATTAGGTGACCATTCCTCAGGAATAGTATACGAAGGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379864.6
3UTR-3UTR CCA 90 bp AATCCTTCGTATACTATTCCTGAGGAATGGTCACCTAATCTCTGCTTAAGCAATCAATATGGATGCAGCTaGAGGCCATTTTCCTATGCA +
Preference number: 2 (lower is better)
Translates to: NPSYTIPEEWSPNLCLSNQYGCS*RPFSYA
Trigger: TGCATAGGAAAATGGCCTCCAGCTGCATCCATATTG...ATTGCTTAAGCAGAGATTAGGTGACCATTCCTCAGGAATAGTATACGAAGGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379864.6
3UTR-3UTR GCA 90 bp AAACCTACAGAATGGGAGAAAATATCCATGAACTATGCATCTGACAAAGGTCTACCTAGATCCTCCACATaGACAATTCACAAGAGTTCG +
Preference number: 2 (lower is better)
Translates to: KPTEWEKISMNYASDKGLPRSST*TIHKSS
Trigger: CGAACTCTTGTGAATTGTGCATGTGGAGGATCTAGG...TAGACCTTTGTCAGATGCATAGTTCATGGATATTTTCTCCCATTCTGTAGGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379864.6
3UTR-3UTR CCA 90 bp AATCCTTCGTATACTATTCCTGAGGAATGGTCACCTAATCTCTGCTTAAGCAATCTTAGACACTGTTGGTaGGAATGTGAATTAGTTCAG +
Preference number: 2 (lower is better)
Translates to: NPSYTIPEEWSPNLCLSNLRHCW*ECELVQ
Trigger: CTGAACTAATTCACATTCCCACCAACAGTGTCTAAG...ATTGCTTAAGCAGAGATTAGGTGACCATTCCTCAGGAATAGTATACGAAGGATT
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379864.6
3UTR-3UTR GCA 90 bp AATCCTTCGTATACTATTCCTGAGGAATGGTCACCTAATCTCTGCTTAAGCAATATTCACAAGAGTTCGTaGTCCTATGAGGATTTAATG +
Preference number: 2 (lower is better)
Translates to: NPSYTIPEEWSPNLCLSNIHKSS*SYEDLM
Trigger: CATTAAATCCTCATAGGAGCACGAACTCTTGTGAAT...ATTGCTTAAGCAGAGATTAGGTGACCATTCCTCAGGAATAGTATACGAAGGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379864.6
3UTR-3UTR CCA 90 bp AATCCTTCGTATACTATTCCTGAGGAATGGTCACCTAATCTCTGCTTAAGCAATACACTTAGACACTGTTaGTGGGAATGTGAATTAGTT +
Preference number: 2 (lower is better)
Translates to: NPSYTIPEEWSPNLCLSNTLRHC*WECELV
Trigger: AACTAATTCACATTCCCACCAACAGTGTCTAAGTGT...ATTGCTTAAGCAGAGATTAGGTGACCATTCCTCAGGAATAGTATACGAAGGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379864.6
3UTR-3UTR CAA 90 bp CAGGCGGGCCAGAGTGCTTTTTGTCCGAGGCATGTCCTATTCTCTGGTCCAGCCTTCCCTCAGGTTCTTTaGCTCCAGGGTACCAATGGC +
Preference number: 3 (lower is better)
Translates to: QAGQSAFCPRHVLFSGPAFPQVL*LQGTNG
Trigger: GCCATTGGTACCCTGGAGCAAAAGAACCTGAGGGAA...GGCTGGACCAGAGAATAGGACATGCCTCGGACAAAAAGCACTCTGGCCCGCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506800.5
3UTR CCA 72 bp GTGGTAATGCTTGCTCACCTGCAGCTCACCTCCTGCTaGGCAGCCCAATTCCTAACAGGCCATGGATGGGTA +
Preference number: 3 (lower is better)
Translates to: VVMLAHLQLTSC*AAQFLTGHGWV
Trigger: TACCCATCCATGGCCTGTTAGGAATTGGGCTGCCCAGCAGGAGGTGAGCTGCAGGTGAGCAAGCATTACCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379864.6
3UTR TCA 72 bp GTTTCATTCAGTTGCCTAGCCTTAAGTGTAGTGGCATaGTCACAGCTCACTGCAGCCTTGACTTGCCAGGCT +
Preference number: 3 (lower is better)
Translates to: VSFSCLALSVVA*SQLTAALTCQA
Trigger: AGCCTGGCAAGTCAAGGCTGCAGTGAGCTGTGATCATGCCACTACACTTAAGGCTAGGCAACTGAATGAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379864.6
3UTR TCA 72 bp CCACTAGAGGGTGGAGGAAGAAAGGAGAGCAAACATTaGCAAATAACTTTCGGCTACTATGCTCAGTCCCTG +
Preference number: 3 (lower is better)
Translates to: PLEGGGRKESKH*QITFGYYAQSL
Trigger: CAGGGACTGAGCATAGTAGCCGAAAGTTATTTGTCAATGTTTGCTCTCCTTTCTTCCTCCACCCTCTAGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379864.6
3UTR CCA 72 bp GACTGTGGAGAAAAGGGAACACTTAGACACTGTTGGTaGGAATGTGAATTAGTTCAGCCACTGTGGAAAGCA +
Preference number: 3 (lower is better)
Translates to: DCGEKGTLRHCW*ECELVQPLWKA
Trigger: TGCTTTCCACAGTGGCTGAACTAATTCACATTCCCACCAACAGTGTCTAAGTGTTCCCTTTTCTCCACAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379864.6
3UTR-3UTR CAA 90 bp AGAAGGCACACTGACAGCAATCAAATACACACCTCCACCACTGCAGGAATCCTTAAAGGAGAGCAAACATaGACAAATAACTTTCGGCTA +
Preference number: 3 (lower is better)
Translates to: RRHTDSNQIHTSTTAGILKGEQT*TNNFRL
Trigger: TAGCCGAAAGTTATTTGTCAATGTTTGCTCTCCTTT...AAGGATTCCTGCAGTGGTGGAGGTGTGTATTTGATTGCTGTCAGTGTGCCTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379864.6
3UTR TCA 72 bp ACAAATAACTTTCGGCTACTATGCTCAGTCCCTGGGTaGTGGGATTATTTGTGCCCCAAATCTCAGCATTAT +
Preference number: 3 (lower is better)
Translates to: TNNFRLLCSVPG*WDYLCPKSQHY
Trigger: ATAATGCTGAGATTTGGGGCACAAATAATCCCATCACCCAGGGACTGAGCATAGTAGCCGAAAGTTATTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379864.6
3UTR TCA 72 bp CTATGCCTTAGAAATGGTGTTAAACTCTCTGTGGGGTaGAGCTCACTCTATACTTACCCTAACAAAGGCTTG +
Preference number: 3 (lower is better)
Translates to: LCLRNGVKLSVG*SSLYTYPNKGL
Trigger: CAAGCCTTTGTTAGGGTAAGTATAGAGTGAGCTTCACCCCACAGAGAGTTTAACACCATTTCTAAGGCATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379864.6
3UTR CCA 72 bp AGCAGAGTGGGTCCCAATCTTTTCTGTACAATTTCCTaGGGGAGGCTTAAAGAAATACATGTGAGATCACAA +
Preference number: 3 (lower is better)
Translates to: SRVGPNLFCTIS*GRLKEIHVRSQ
Trigger: TTGTGATCTCACATGTATTTCTTTAAGCCTCCCCCAGGAAATTGTACAGAAAAGATTGGGACCCACTCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379864.6
3UTR-3UTR CAA 90 bp AGGGTCCTGGAATTGATAAACAACTTCGGTAAAGTTTCAGGATACAAAATCAATCAGTTCCCAACCCTTTaGACACCAAGGGCTGGTTTC +
Preference number: 3 (lower is better)
Translates to: RVLELINNFGKVSGYKINQFPTL*TPRAGF
Trigger: GAAACCAGCCCTTGGTGTCAAAAGGGTTGGGAACTG...ATTGATTTTGTATCCTGAAACTTTACCGAAGTTGTTTATCAATTCCAGGACCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379864.6
3UTR TCA 72 bp ATGTGCTACATATACACCAGCAGTTCCCAACCCTTTTaGCACCAAGGGCTGGTTTCATGGAAAACAATTTTT +
Preference number: 3 (lower is better)
Translates to: MCYIYTSSSQPF*HQGLVSWKTIF
Trigger: AAAAATTGTTTTCCATGAAACCAGCCCTTGGTGTCAAAAGGGTTGGGAACTGCTGGTGTATATGTAGCACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379864.6
3UTR GCA 72 bp CTATGCAAATTAACACAGAAGCAGGAAACCAAATACTaGATGTTCTCGCTTACAAGTGATAGCCAAACACTG +
Preference number: 3 (lower is better)
Translates to: LCKLTQKQETKY*MFSLTSDSQTL
Trigger: CAGTGTTTGGCTATCACTTGTAAGCGAGAACATGCAGTATTTGGTTTCCTGCTTCTGTGTTAATTTGCATAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379864.6
3UTR CCA 72 bp AATAGCTATGCCTTAGAAATGGTGTTAAACTCTCTGTaGGGTGAAGCTCACTCTATACTTACCCTAACAAAG +
Preference number: 3 (lower is better)
Translates to: NSYALEMVLNSL*GEAHSILTLTK
Trigger: CTTTGTTAGGGTAAGTATAGAGTGAGCTTCACCCCACAGAGAGTTTAACACCATTTCTAAGGCATAGCTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379864.6
3UTR GCA 72 bp TCGTATACTATTCCTGAGGAATGGTCACCTAATCTCTaGTTAAGCAATTTCAACGATGATAAACTTACGACT +
Preference number: 3 (lower is better)
Translates to: SYTIPEEWSPNL*LSNFNDDKLTT
Trigger: AGTCGTAAGTTTATCATCGTTGAAATTGCTTAAGCAGAGATTAGGTGACCATTCCTCAGGAATAGTATACGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379864.6
CDS-3UTR GCA 90 bp AGGCGGGCCAGAGTGCTTTTTGTCCGAGGCATGTCCTATTCTCTGGTCCAGCCATCCCTCAGGTTCTTTTaGTCCAGGGTACCAATGGCT +
Preference number: 4 (lower is better)
Translates to: RRARVLFVRGMSYSLVQPSLRFF*SRVPMA
Trigger: AGCCATTGGTACCCTGGAGCAAAAGAACCTGAGGGA...TGGCTGGACCAGAGAATAGGACATGCCTCGGACAAAAAGCACTCTGGCCCGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506800.5
3UTR CAA 72 bp TTTAGCTCTTCAGGTGAGTCTGACACACAGCCAAGGTaGAGGACCCATGTAAGCAGGCGGGCCAGAGTGCTT +
Preference number: 4 (lower is better)
Translates to: FSSSGESDTQPR*RTHVSRRARVL
Trigger: AAGCACTCTGGCCCGCCTGCTTACATGGGTCCTCAACCTTGGCTGTGTGTCAGACTCACCTGAAGAGCTAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506800.5
CDS-3UTR GCA 90 bp GCACAGACCTCAGAGCAGGGTAGGGGATCCCAAACAAAGCATGGTGGTTTCATGACTGCAGCCTTGACTTaGCAGGCTCAAGTGATCCTC +
Preference number: 4 (lower is better)
Translates to: AQTSEQGRGSQTKHGGFMTAALT*QAQVIL
Trigger: GAGGATCACTTGAGCCTGGCAAGTCAAGGCTGCAGT...CATGAAACCACCATGCTTTGTTTGGGATCCCCTACCCTGCTCTGAGGTCTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379864.6
CDS-3UTR TCA 90 bp AAGCAGGCGGGCCAGAGTGCTTTTTGTCCGAGGCATGTCCTATTCTCTGGTCCATGCATCCTAGGCAGTTaGTCCACCTGTTGCCTTTTA +
Preference number: 4 (lower is better)
Translates to: KQAGQSAFCPRHVLFSGPCILGS*STCCLL
Trigger: TAAAAGGCAACAGGTGGATCAACTGCCTAGGATGCA...TGGACCAGAGAATAGGACATGCCTCGGACAAAAAGCACTCTGGCCCGCCTGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506800.5
CDS-3UTR TCA 90 bp AGGCGGGCCAGAGTGCTTTTTGTCCGAGGCATGTCCTATTCTCTGGTCCAGCCAATGTCTCCAAGCAGCTaGCCTTTAAAGGGTCCAATT +
Preference number: 4 (lower is better)
Translates to: RRARVLFVRGMSYSLVQPMSPSS*PLKGPI
Trigger: AATTGGACCCTTTAAAGGTCAGCTGCTTGGAGACAT...TGGCTGGACCAGAGAATAGGACATGCCTCGGACAAAAAGCACTCTGGCCCGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506800.5
CDS-3UTR GCA 90 bp GCACAGACCTCAGAGCAGGGTAGGGGATCCCAAACAAAGCATGGTGGTTTCATGACTTCTTCCAGCAACTaGTGTTTCAGGCGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: AQTSEQGRGSQTKHGGFMTSSSN*CFRRLV
Trigger: CACCAACCGCCTGAAACAGCAGTTGCTGGAAGAAGT...CATGAAACCACCATGCTTTGTTTGGGATCCCCTACCCTGCTCTGAGGTCTGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379864.6
CDS-3UTR TCA 90 bp ACAATTTCCTGGGGGAGGCTTAAAGAAATACATGTGAGATCACAATCCTGGGGGAGCCTCCCAAGCAGCTaGGACCATAGGCATGCACCA +
Preference number: 4 (lower is better)
Translates to: TISWGRLKEIHVRSQSWGSLPSS*DHRHAP
Trigger: TGGTGCATGCCTATGGTCTCAGCTGCTTGGGAGGCT...CCCCCAGGATTGTGATCTCACATGTATTTCTTTAAGCCTCCCCCAGGAAATTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000379864.6
CDS-3UTR CCA 90 bp AGAAGGCACACTGACAGCAATCAAATACACACCTCCACCACTGCAGGAATCCTTGCTGTTTCAGGCGGTTaGTGCTCACACCGTCGAAGT +
Preference number: 4 (lower is better)
Translates to: RRHTDSNQIHTSTTAGILAVSGG*CSHRRS
Trigger: ACTTCGACGGTGTGAGCACCAACCGCCTGAAACAGC...AAGGATTCCTGCAGTGGTGGAGGTGTGTATTTGATTGCTGTCAGTGTGCCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379864.6
CDS-3UTR TCA 90 bp GCACAGACCTCAGAGCAGGGTAGGGGATCCCAAACAAAGCATGGTGGTTTCATGATGTCTCCAAGCAGCTaGCCTTTAAAGGGTCCAATT +
Preference number: 4 (lower is better)
Translates to: AQTSEQGRGSQTKHGGFMMSPSS*PLKGPI
Trigger: AATTGGACCCTTTAAAGGTCAGCTGCTTGGAGACAT...CATGAAACCACCATGCTTTGTTTGGGATCCCCTACCCTGCTCTGAGGTCTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379864.6
CDS-3UTR TCA 90 bp AGGCTTAAAGAAATACATGTGAGATCACAATCCTGGGGGTGGTGCACATGTCTGCCACACCTGCAGCACTaGAACCCAATGTCTCCAAGC +
Preference number: 4 (lower is better)
Translates to: RLKEIHVRSQSWGWCTCLPHLQH*NPMSPS
Trigger: GCTTGGAGACATTGGGTTTCAGTGCTGCAGGTGTGG...CAGACATGTGCACCACCCCCAGGATTGTGATCTCACATGTATTTCTTTAAGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000239860.10
ENST00000379864.6
ENST00000491049.6
ENST00000503173.5
ENST00000506800.5
CDS-3UTR TCA 90 bp ACAATTTCCTGGGGGAGGCTTAAAGAAATACATGTGAGATCACAATCCTGGGGGCCACACCTGCAGCACTaGAACCCAATGTCTCCAAGC +
Preference number: 4 (lower is better)
Translates to: TISWGRLKEIHVRSQSWGPHLQH*NPMSPS
Trigger: GCTTGGAGACATTGGGTTTCAGTGCTGCAGGTGTGG...CCCCCAGGATTGTGATCTCACATGTATTTCTTTAAGCCTCCCCCAGGAAATTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000239860.10
ENST00000379864.6
ENST00000491049.6
ENST00000503173.5
ENST00000506800.5
CDS-3UTR TCA 90 bp GCACAGACCTCAGAGCAGGGTAGGGGATCCCAAACAAAGCATGGTGGTTTCATGGTTGAGTGTCCCAGCTaGTCACTCACAGAATTTTCT +
Preference number: 4 (lower is better)
Translates to: AQTSEQGRGSQTKHGGFMVECPS*SLTEFS
Trigger: AGAAAATTCTGTGAGTGATCAGCTGGGACACTCAAC...CATGAAACCACCATGCTTTGTTTGGGATCCCCTACCCTGCTCTGAGGTCTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379864.6
CDS-3UTR GCA 90 bp ATTTCCTGGGGGAGGCTTAAAGAAATACATGTGAGATCACAATCCTGGGGGTGGGTTTCAGGCGGTTGGTaGTCACACCGTCGAAGTTGT +
Preference number: 4 (lower is better)
Translates to: ISWGRLKEIHVRSQSWGWVSGGW*SHRRSC
Trigger: ACAACTTCGACGGTGTGAGCACCAACCGCCTGAAAC...CCACCCCCAGGATTGTGATCTCACATGTATTTCTTTAAGCCTCCCCCAGGAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000239860.10
ENST00000379864.6
ENST00000491049.6
ENST00000503173.5
ENST00000506800.5
CDS-3UTR GCA 90 bp ATTTCCTGGGGGAGGCTTAAAGAAATACATGTGAGATCACAATCCTGGGGGTGGTGGTCCAGCCACACCTaGAGCACTGAAACCCAATGT +
Preference number: 4 (lower is better)
Translates to: ISWGRLKEIHVRSQSWGWWSSHT*STETQC
Trigger: ACATTGGGTTTCAGTGCTGCAGGTGTGGCTGGACCA...CCACCCCCAGGATTGTGATCTCACATGTATTTCTTTAAGCCTCCCCCAGGAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000239860.10
ENST00000379864.6
ENST00000491049.6
ENST00000503173.5
ENST00000506800.5
CDS-3UTR GCA 90 bp CTTAAAGAAATACATGTGAGATCACAATCCTGGGGGTGGTGCACATGTCTGAGTGCAGGCGGGCCAGAGTaGTTTTTGTCCGAGGCATGT +
Preference number: 4 (lower is better)
Translates to: LKEIHVRSQSWGWCTCLSAGGPE*FLSEAC
Trigger: ACATGCCTCGGACAAAAAGCACTCTGGCCCGCCTGC...ACTCAGACATGTGCACCACCCCCAGGATTGTGATCTCACATGTATTTCTTTAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000239860.10
ENST00000379864.6
ENST00000491049.6
ENST00000503173.5
ENST00000506800.5
CDS-3UTR CCA 90 bp AGGCTTAAAGAAATACATGTGAGATCACAATCCTGGGGGTGGTGCACATGTCTGGCTGTTTCAGGCGGTTaGTGCTCACACCGTCGAAGT +
Preference number: 4 (lower is better)
Translates to: RLKEIHVRSQSWGWCTCLAVSGG*CSHRRS
Trigger: ACTTCGACGGTGTGAGCACCAACCGCCTGAAACAGC...CAGACATGTGCACCACCCCCAGGATTGTGATCTCACATGTATTTCTTTAAGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000239860.10
ENST00000379864.6
ENST00000491049.6
ENST00000503173.5
ENST00000506800.5
CDS-3UTR CCA 90 bp AGGCTTAAAGAAATACATGTGAGATCACAATCCTGGGGGTGGTGCACATGTCTGGCATGTCCTATTCTCTaGTCCAGCCACACCTGCAGC +
Preference number: 4 (lower is better)
Translates to: RLKEIHVRSQSWGWCTCLACPIL*SSHTCS
Trigger: GCTGCAGGTGTGGCTGGACCAGAGAATAGGACATGC...CAGACATGTGCACCACCCCCAGGATTGTGATCTCACATGTATTTCTTTAAGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000239860.10
ENST00000379864.6
ENST00000491049.6
ENST00000503173.5
ENST00000506800.5
CDS-3UTR CCA 90 bp GCACAGACCTCAGAGCAGGGTAGGGGATCCCAAACAAAGCATGGTGGTTTCATGGGGAGGGGATGGTTTTaGGATGAAACTGTTTCAGAT +
Preference number: 4 (lower is better)
Translates to: AQTSEQGRGSQTKHGGFMGRGWF*DETVSD
Trigger: ATCTGAAACAGTTTCATCCCAAAACCATCCCCTCCC...CATGAAACCACCATGCTTTGTTTGGGATCCCCTACCCTGCTCTGAGGTCTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000379864.6
CDS-3UTR CCA 90 bp AAGGTTGAGGACCCATGTAAGCAGGCGGGCCAGAGTGCTTTTTGTCCGAGGCATGCTCCAGGGTACCAATaGCTCCTTAGTTATTTTCTT +
Preference number: 4 (lower is better)
Translates to: KVEDPCKQAGQSAFCPRHAPGYQ*LLSYFL
Trigger: AAGAAAATAACTAAGGAGCCATTGGTACCCTGGAGC...ATGCCTCGGACAAAAAGCACTCTGGCCCGCCTGCTTACATGGGTCCTCAACCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506800.5
CDS-3UTR TCA 90 bp CTTAAAGAAATACATGTGAGATCACAATCCTGGGGGTGGTGCACATGTCTGAGTCCACACCTGCAGCACTaGAACCCAATGTCTCCAAGC +
Preference number: 4 (lower is better)
Translates to: LKEIHVRSQSWGWCTCLSPHLQH*NPMSPS
Trigger: GCTTGGAGACATTGGGTTTCAGTGCTGCAGGTGTGG...ACTCAGACATGTGCACCACCCCCAGGATTGTGATCTCACATGTATTTCTTTAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000239860.10
ENST00000379864.6
ENST00000491049.6
ENST00000503173.5
ENST00000506800.5
CDS-3UTR GCA 90 bp AGGCTTAAAGAAATACATGTGAGATCACAATCCTGGGGGTGGTGCACATGTCTGGTTTCAGGCGGTTGGTaGTCACACCGTCGAAGTTGT +
Preference number: 4 (lower is better)
Translates to: RLKEIHVRSQSWGWCTCLVSGGW*SHRRSC
Trigger: ACAACTTCGACGGTGTGAGCACCAACCGCCTGAAAC...CAGACATGTGCACCACCCCCAGGATTGTGATCTCACATGTATTTCTTTAAGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000239860.10
ENST00000379864.6
ENST00000491049.6
ENST00000503173.5
ENST00000506800.5
CDS-3UTR GCA 90 bp AGGCTTAAAGAAATACATGTGAGATCACAATCCTGGGGGTGGTGCACATGTCTGTGGTCCAGCCACACCTaGAGCACTGAAACCCAATGT +
Preference number: 4 (lower is better)
Translates to: RLKEIHVRSQSWGWCTCLWSSHT*STETQC
Trigger: ACATTGGGTTTCAGTGCTGCAGGTGTGGCTGGACCA...CAGACATGTGCACCACCCCCAGGATTGTGATCTCACATGTATTTCTTTAAGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000239860.10
ENST00000379864.6
ENST00000491049.6
ENST00000503173.5
ENST00000506800.5
CDS-3UTR GCA 90 bp ACAATTTCCTGGGGGAGGCTTAAAGAAATACATGTGAGATCACAATCCTGGGGGTGGTCCAGCCACACCTaGAGCACTGAAACCCAATGT +
Preference number: 4 (lower is better)
Translates to: TISWGRLKEIHVRSQSWGWSSHT*STETQC
Trigger: ACATTGGGTTTCAGTGCTGCAGGTGTGGCTGGACCA...CCCCCAGGATTGTGATCTCACATGTATTTCTTTAAGCCTCCCCCAGGAAATTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000239860.10
ENST00000379864.6
ENST00000491049.6
ENST00000503173.5
ENST00000506800.5
CDS-3UTR GCA 90 bp AGAAATACATGTGAGATCACAATCCTGGGGGTGGTGCACATGTCTGAGTATTTTGCAGGCGGGCCAGAGTaGTTTTTGTCCGAGGCATGT +
Preference number: 4 (lower is better)
Translates to: RNTCEITILGVVHMSEYFAGGPE*FLSEAC
Trigger: ACATGCCTCGGACAAAAAGCACTCTGGCCCGCCTGC...AAAATACTCAGACATGTGCACCACCCCCAGGATTGTGATCTCACATGTATTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000239860.10
ENST00000379864.6
ENST00000491049.6
ENST00000503173.5
ENST00000506800.5
CDS-3UTR GCA 90 bp AATACATGTGAGATCACAATCCTGGGGGTGGTGCACATGTCTGAGTATTTTACTGCAGGCGGGCCAGAGTaGTTTTTGTCCGAGGCATGT +
Preference number: 4 (lower is better)
Translates to: NTCEITILGVVHMSEYFTAGGPE*FLSEAC
Trigger: ACATGCCTCGGACAAAAAGCACTCTGGCCCGCCTGC...AGTAAAATACTCAGACATGTGCACCACCCCCAGGATTGTGATCTCACATGTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000239860.10
ENST00000379864.6
ENST00000491049.6
ENST00000503173.5
ENST00000506800.5
CDS-3UTR TCA 90 bp AATACATGTGAGATCACAATCCTGGGGGTGGTGCACATGTCTGAGTATTTTACTCCACACCTGCAGCACTaGAACCCAATGTCTCCAAGC +
Preference number: 4 (lower is better)
Translates to: NTCEITILGVVHMSEYFTPHLQH*NPMSPS
Trigger: GCTTGGAGACATTGGGTTTCAGTGCTGCAGGTGTGG...AGTAAAATACTCAGACATGTGCACCACCCCCAGGATTGTGATCTCACATGTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000239860.10
ENST00000379864.6
ENST00000491049.6
ENST00000503173.5
ENST00000506800.5
CDS-3UTR TCA 90 bp GAAATACATGTGAGATCACAATCCTGGGGGTGGTGCACATGTCTGAGTATTTTACCACACCTGCAGCACTaGAACCCAATGTCTCCAAGC +
Preference number: 4 (lower is better)
Translates to: EIHVRSQSWGWCTCLSILPHLQH*NPMSPS
Trigger: GCTTGGAGACATTGGGTTTCAGTGCTGCAGGTGTGG...TAAAATACTCAGACATGTGCACCACCCCCAGGATTGTGATCTCACATGTATTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000239860.10
ENST00000379864.6
ENST00000491049.6
ENST00000503173.5
ENST00000506800.5
CDS-3UTR TCA 90 bp ACAATTTCCTGGGGGAGGCTTAAAGAAATACATGTGAGATCACAATCCTGGGGGAGTTCCCAACCCTTTTaGCACCAAGGGCTGGTTTCA +
Preference number: 4 (lower is better)
Translates to: TISWGRLKEIHVRSQSWGSSQPF*HQGLVS
Trigger: TGAAACCAGCCCTTGGTGTCAAAAGGGTTGGGAACT...CCCCCAGGATTGTGATCTCACATGTATTTCTTTAAGCCTCCCCCAGGAAATTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000379864.6
CDS-3UTR GCA 90 bp AGGCTTAAAGAAATACATGTGAGATCACAATCCTGGGGGTGGTGCACATGTCTGACTTCTTCCAGCAACTaGTGTTTCAGGCGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: RLKEIHVRSQSWGWCTCLTSSSN*CFRRLV
Trigger: CACCAACCGCCTGAAACAGCAGTTGCTGGAAGAAGT...CAGACATGTGCACCACCCCCAGGATTGTGATCTCACATGTATTTCTTTAAGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000239860.10
ENST00000379864.6
ENST00000491049.6
ENST00000503173.5
ENST00000506800.5
CDS-3UTR GCA 90 bp CTTAAAGAAATACATGTGAGATCACAATCCTGGGGGTGGTGCACATGTCTGAGTTGGTCCAGCCACACCTaGAGCACTGAAACCCAATGT +
Preference number: 4 (lower is better)
Translates to: LKEIHVRSQSWGWCTCLSWSSHT*STETQC
Trigger: ACATTGGGTTTCAGTGCTGCAGGTGTGGCTGGACCA...ACTCAGACATGTGCACCACCCCCAGGATTGTGATCTCACATGTATTTCTTTAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000239860.10
ENST00000379864.6
ENST00000491049.6
ENST00000503173.5
ENST00000506800.5
CDS-3UTR CCA 90 bp AGAAATACATGTGAGATCACAATCCTGGGGGTGGTGCACATGTCTGAGTATTTTGCTGTTTCAGGCGGTTaGTGCTCACACCGTCGAAGT +
Preference number: 4 (lower is better)
Translates to: RNTCEITILGVVHMSEYFAVSGG*CSHRRS
Trigger: ACTTCGACGGTGTGAGCACCAACCGCCTGAAACAGC...AAAATACTCAGACATGTGCACCACCCCCAGGATTGTGATCTCACATGTATTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000239860.10
ENST00000379864.6
ENST00000491049.6
ENST00000503173.5
ENST00000506800.5
CDS-3UTR CCA 90 bp AAAGAAATACATGTGAGATCACAATCCTGGGGGTGGTGCACATGTCTGAGTATTGCTGTTTCAGGCGGTTaGTGCTCACACCGTCGAAGT +
Preference number: 4 (lower is better)
Translates to: KEIHVRSQSWGWCTCLSIAVSGG*CSHRRS
Trigger: ACTTCGACGGTGTGAGCACCAACCGCCTGAAACAGC...AATACTCAGACATGTGCACCACCCCCAGGATTGTGATCTCACATGTATTTCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000239860.10
ENST00000379864.6
ENST00000491049.6
ENST00000503173.5
ENST00000506800.5
CDS-3UTR CCA 90 bp GTGCACATGTCTGAGTATTTTACTTTTAGCTCTTCAGGTGAGTCTGACACACAGGCTGTTTCAGGCGGTTaGTGCTCACACCGTCGAAGT +
Preference number: 4 (lower is better)
Translates to: VHMSEYFTFSSSGESDTQAVSGG*CSHRRS
Trigger: ACTTCGACGGTGTGAGCACCAACCGCCTGAAACAGC...CTGTGTGTCAGACTCACCTGAAGAGCTAAAAGTAAAATACTCAGACATGTGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506800.5
CDS-3UTR CCA 90 bp ATACATGTGAGATCACAATCCTGGGGGTGGTGCACATGTCTGAGTATTTTACTTGCATGTCCTATTCTCTaGTCCAGCCACACCTGCAGC +
Preference number: 4 (lower is better)
Translates to: IHVRSQSWGWCTCLSILLACPIL*SSHTCS
Trigger: GCTGCAGGTGTGGCTGGACCAGAGAATAGGACATGC...AAGTAAAATACTCAGACATGTGCACCACCCCCAGGATTGTGATCTCACATGTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000239860.10
ENST00000379864.6
ENST00000491049.6
ENST00000503173.5
ENST00000506800.5
CDS-3UTR CCA 90 bp AGAAATACATGTGAGATCACAATCCTGGGGGTGGTGCACATGTCTGAGTATTTTGCATGTCCTATTCTCTaGTCCAGCCACACCTGCAGC +
Preference number: 4 (lower is better)
Translates to: RNTCEITILGVVHMSEYFACPIL*SSHTCS
Trigger: GCTGCAGGTGTGGCTGGACCAGAGAATAGGACATGC...AAAATACTCAGACATGTGCACCACCCCCAGGATTGTGATCTCACATGTATTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000239860.10
ENST00000379864.6
ENST00000491049.6
ENST00000503173.5
ENST00000506800.5
CDS-3UTR CCA 90 bp GAAATACATGTGAGATCACAATCCTGGGGGTGGTGCACATGTCTGAGTATTTTAGCATGTCCTATTCTCTaGTCCAGCCACACCTGCAGC +
Preference number: 4 (lower is better)
Translates to: EIHVRSQSWGWCTCLSILACPIL*SSHTCS
Trigger: GCTGCAGGTGTGGCTGGACCAGAGAATAGGACATGC...TAAAATACTCAGACATGTGCACCACCCCCAGGATTGTGATCTCACATGTATTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000239860.10
ENST00000379864.6
ENST00000491049.6
ENST00000503173.5
ENST00000506800.5
CDS-3UTR CCA 90 bp TGTCTGAGTATTTTACTTTTAGCTCTTCAGGTGAGTCTGACACACAGCCAAGGTGCATGTCCTATTCTCTaGTCCAGCCACACCTGCAGC +
Preference number: 4 (lower is better)
Translates to: CLSILLLALQVSLTHSQGACPIL*SSHTCS
Trigger: GCTGCAGGTGTGGCTGGACCAGAGAATAGGACATGC...ACCTTGGCTGTGTGTCAGACTCACCTGAAGAGCTAAAAGTAAAATACTCAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506800.5
CDS-3UTR CCA 90 bp GAAATACATGTGAGATCACAATCCTGGGGGTGGTGCACATGTCTGAGTATTTTACAGCTCACCTCCTGCTaGGCAGCCCAATTCCTAACA +
Preference number: 4 (lower is better)
Translates to: EIHVRSQSWGWCTCLSILQLTSC*AAQFLT
Trigger: TGTTAGGAATTGGGCTGCCCAGCAGGAGGTGAGCTG...TAAAATACTCAGACATGTGCACCACCCCCAGGATTGTGATCTCACATGTATTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379864.6
CDS-3UTR CCA 90 bp CTTAAAGAAATACATGTGAGATCACAATCCTGGGGGTGGTGCACATGTCTGAGTTCAGGGAGGCTGAAGTaGCTGAAGTTGCAGAGCAGA +
Preference number: 4 (lower is better)
Translates to: LKEIHVRSQSWGWCTCLSSGRLK*LKLQSR
Trigger: TCTGCTCTGCAACTTCAGCCACTTCAGCCTCCCTGA...ACTCAGACATGTGCACCACCCCCAGGATTGTGATCTCACATGTATTTCTTTAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379864.6
CDS-3UTR TCA 90 bp ACAATTTCCTGGGGGAGGCTTAAAGAAATACATGTGAGATCACAATCCTGGGGGTGCATCCTAGGCAGTTaGTCCACCTGTTGCCTTTTA +
Preference number: 4 (lower is better)
Translates to: TISWGRLKEIHVRSQSWGCILGS*STCCLL
Trigger: TAAAAGGCAACAGGTGGATCAACTGCCTAGGATGCA...CCCCCAGGATTGTGATCTCACATGTATTTCTTTAAGCCTCCCCCAGGAAATTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000239860.10
ENST00000379864.6
ENST00000491049.6
ENST00000503173.5
ENST00000506800.5
CDS-3UTR TCA 90 bp ACAATTTCCTGGGGGAGGCTTAAAGAAATACATGTGAGATCACAATCCTGGGGGGTGGTTTCATGTAGTTaGGAAGACAGAGGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: TISWGRLKEIHVRSQSWGVVSCS*EDRGWS
Trigger: ACTCCAGCCTCTGTCTTCTCAACTACATGAAACCAC...CCCCCAGGATTGTGATCTCACATGTATTTCTTTAAGCCTCCCCCAGGAAATTGT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000379864.6
CDS-3UTR GCA 90 bp AAAGAAATACATGTGAGATCACAATCCTGGGGGTGGTGCACATGTCTGAGTATTGTTTCAGGCGGTTGGTaGTCACACCGTCGAAGTTGT +
Preference number: 4 (lower is better)
Translates to: KEIHVRSQSWGWCTCLSIVSGGW*SHRRSC
Trigger: ACAACTTCGACGGTGTGAGCACCAACCGCCTGAAAC...AATACTCAGACATGTGCACCACCCCCAGGATTGTGATCTCACATGTATTTCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000239860.10
ENST00000379864.6
ENST00000491049.6
ENST00000503173.5
ENST00000506800.5
CDS-3UTR GCA 90 bp AGAAATACATGTGAGATCACAATCCTGGGGGTGGTGCACATGTCTGAGTATTTTGTTTCAGGCGGTTGGTaGTCACACCGTCGAAGTTGT +
Preference number: 4 (lower is better)
Translates to: RNTCEITILGVVHMSEYFVSGGW*SHRRSC
Trigger: ACAACTTCGACGGTGTGAGCACCAACCGCCTGAAAC...AAAATACTCAGACATGTGCACCACCCCCAGGATTGTGATCTCACATGTATTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000239860.10
ENST00000379864.6
ENST00000491049.6
ENST00000503173.5
ENST00000506800.5
CDS-3UTR GCA 90 bp TGGTGCACATGTCTGAGTATTTTACTTTTAGCTCTTCAGGTGAGTCTGACACACGTTTCAGGCGGTTGGTaGTCACACCGTCGAAGTTGT +
Preference number: 4 (lower is better)
Translates to: WCTCLSILLLALQVSLTHVSGGW*SHRRSC
Trigger: ACAACTTCGACGGTGTGAGCACCAACCGCCTGAAAC...GTGTGTCAGACTCACCTGAAGAGCTAAAAGTAAAATACTCAGACATGTGCACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506800.5
CDS-3UTR GCA 90 bp AAAGAAATACATGTGAGATCACAATCCTGGGGGTGGTGCACATGTCTGAGTATTTGGTCCAGCCACACCTaGAGCACTGAAACCCAATGT +
Preference number: 4 (lower is better)
Translates to: KEIHVRSQSWGWCTCLSIWSSHT*STETQC
Trigger: ACATTGGGTTTCAGTGCTGCAGGTGTGGCTGGACCA...AATACTCAGACATGTGCACCACCCCCAGGATTGTGATCTCACATGTATTTCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000239860.10
ENST00000379864.6
ENST00000491049.6
ENST00000503173.5
ENST00000506800.5
CDS-3UTR GCA 90 bp AAAGAAATACATGTGAGATCACAATCCTGGGGGTGGTGCACATGTCTGAGTATTTCAGGTGGTAATGCTTaGTCACCTGCAGCTCACCTC +
Preference number: 4 (lower is better)
Translates to: KEIHVRSQSWGWCTCLSISGGNA*SPAAHL
Trigger: GAGGTGAGCTGCAGGTGAGCAAGCATTACCACCTGA...AATACTCAGACATGTGCACCACCCCCAGGATTGTGATCTCACATGTATTTCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379864.6
CDS-3UTR TCA 90 bp CTTAAAGAAATACATGTGAGATCACAATCCTGGGGGTGGTGCACATGTCTGAGTTGCATCCTAGGCAGTTaGTCCACCTGTTGCCTTTTA +
Preference number: 4 (lower is better)
Translates to: LKEIHVRSQSWGWCTCLSCILGS*STCCLL
Trigger: TAAAAGGCAACAGGTGGATCAACTGCCTAGGATGCA...ACTCAGACATGTGCACCACCCCCAGGATTGTGATCTCACATGTATTTCTTTAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000239860.10
ENST00000379864.6
ENST00000491049.6
ENST00000503173.5
ENST00000506800.5
CDS-3UTR GCA 90 bp GAAATACATGTGAGATCACAATCCTGGGGGTGGTGCACATGTCTGAGTATTTTAACTTCTTCCAGCAACTaGTGTTTCAGGCGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: EIHVRSQSWGWCTCLSILTSSSN*CFRRLV
Trigger: CACCAACCGCCTGAAACAGCAGTTGCTGGAAGAAGT...TAAAATACTCAGACATGTGCACCACCCCCAGGATTGTGATCTCACATGTATTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000239860.10
ENST00000379864.6
ENST00000491049.6
ENST00000503173.5
ENST00000506800.5
CDS-3UTR GCA 90 bp GTGCACATGTCTGAGTATTTTACTTTTAGCTCTTCAGGTGAGTCTGACACACAGACTTCTTCCAGCAACTaGTGTTTCAGGCGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: VHMSEYFTFSSSGESDTQTSSSN*CFRRLV
Trigger: CACCAACCGCCTGAAACAGCAGTTGCTGGAAGAAGT...CTGTGTGTCAGACTCACCTGAAGAGCTAAAAGTAAAATACTCAGACATGTGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506800.5
CDS-3UTR GCA 90 bp AGAAATACATGTGAGATCACAATCCTGGGGGTGGTGCACATGTCTGAGTATTTTGCACTGCATCCTTCTTaGGGACTTCTTCCAGCAACT +
Preference number: 4 (lower is better)
Translates to: RNTCEITILGVVHMSEYFALHPS*GLLPAT
Trigger: AGTTGCTGGAAGAAGTCCGCAAGAAGGATGCAGTGC...AAAATACTCAGACATGTGCACCACCCCCAGGATTGTGATCTCACATGTATTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503173.5
CDS-3UTR GCA 90 bp AAACCTACAGAATGGGAGAAAATATCCATGAACTATGCATCTGACAAAGGTCTACTGCAGCTCACCTCCTaGTGGGCAGCCCAATTCCTA +
Preference number: 4 (lower is better)
Translates to: KPTEWEKISMNYASDKGLLQLTS*WAAQFL
Trigger: TAGGAATTGGGCTGCCCAGCAGGAGGTGAGCTGCAG...TAGACCTTTGTCAGATGCATAGTTCATGGATATTTTCTCCCATTCTGTAGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379864.6
CDS-3UTR TCA 90 bp ATTTCCTGGGGGAGGCTTAAAGAAATACATGTGAGATCACAATCCTGGGGGTGGCTTCTGGTAAGCCTTTaGTTCTTGTTCCAGTTTAAG +
Preference number: 4 (lower is better)
Translates to: ISWGRLKEIHVRSQSWGWLLVSL*FLFQFK
Trigger: CTTAAACTGGAACAAGAATCAAAGGCTTACCAGAAG...CCACCCCCAGGATTGTGATCTCACATGTATTTCTTTAAGCCTCCCCCAGGAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000239860.10
ENST00000379864.6
ENST00000491049.6
ENST00000503173.5
ENST00000506800.5
CDS-3UTR TCA 90 bp GAAATACATGTGAGATCACAATCCTGGGGGTGGTGCACATGTCTGAGTATTTTATGCATCCTAGGCAGTTaGTCCACCTGTTGCCTTTTA +
Preference number: 4 (lower is better)
Translates to: EIHVRSQSWGWCTCLSILCILGS*STCCLL
Trigger: TAAAAGGCAACAGGTGGATCAACTGCCTAGGATGCA...TAAAATACTCAGACATGTGCACCACCCCCAGGATTGTGATCTCACATGTATTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000239860.10
ENST00000379864.6
ENST00000491049.6
ENST00000503173.5
ENST00000506800.5
CDS-3UTR TCA 90 bp AATACATGTGAGATCACAATCCTGGGGGTGGTGCACATGTCTGAGTATTTTACTTGCATCCTAGGCAGTTaGTCCACCTGTTGCCTTTTA +
Preference number: 4 (lower is better)
Translates to: NTCEITILGVVHMSEYFTCILGS*STCCLL
Trigger: TAAAAGGCAACAGGTGGATCAACTGCCTAGGATGCA...AGTAAAATACTCAGACATGTGCACCACCCCCAGGATTGTGATCTCACATGTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000239860.10
ENST00000379864.6
ENST00000491049.6
ENST00000503173.5
ENST00000506800.5
CDS-3UTR TCA 90 bp ATGCACTTGCATGTTCATCGCAGCACTATTCACAATAGTAAAGATACAGAATCATTGGGATTACAGGCATaGACTACTAGGCCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: MHLHVHRSTIHNSKDTESLGLQA*TTRPGP
Trigger: GGGGCCAGGCCTAGTAGTTCATGCCTGTAATCCCAA...TGATTCTGTATCTTTACTATTGTGAATAGTGCTGCGATGAACATGCAAGTGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379864.6
CDS-3UTR GCA 90 bp CTTAAAGAAATACATGTGAGATCACAATCCTGGGGGTGGTGCACATGTCTGAGTCCTAGATCCTCCACATaGACAATTCACAAGAGTTCG +
Preference number: 4 (lower is better)
Translates to: LKEIHVRSQSWGWCTCLSPRSST*TIHKSS
Trigger: CGAACTCTTGTGAATTGTGCATGTGGAGGATCTAGG...ACTCAGACATGTGCACCACCCCCAGGATTGTGATCTCACATGTATTTCTTTAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379864.6
CDS-3UTR GCA 90 bp ATACATGTGAGATCACAATCCTGGGGGTGGTGCACATGTCTGAGTATTTTACTTACAGGTCCTCACCTGTaGACACAGCAAAAAGCAATC +
Preference number: 4 (lower is better)
Translates to: IHVRSQSWGWCTCLSILLTGPHL*TQQKAI
Trigger: GATTGCTTTTTGCTGTGTGCACAGGTGAGGACCTGT...AAGTAAAATACTCAGACATGTGCACCACCCCCAGGATTGTGATCTCACATGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000379864.6
CDS-3UTR CCA 90 bp ACAATTTCCTGGGGGAGGCTTAAAGAAATACATGTGAGATCACAATCCTGGGGGCAAGGGCTGGTTTCATaGAAAACAATTTTTCCACGG +
Preference number: 4 (lower is better)
Translates to: TISWGRLKEIHVRSQSWGQGLVS*KTIFPR
Trigger: CCGTGGAAAAATTGTTTTCCATGAAACCAGCCCTTG...CCCCCAGGATTGTGATCTCACATGTATTTCTTTAAGCCTCCCCCAGGAAATTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000379864.6
CDS-3UTR TCA 90 bp AGGCTTAAAGAAATACATGTGAGATCACAATCCTGGGGGTGGTGCACATGTCTGCTTCTGGTAAGCCTTTaGTTCTTGTTCCAGTTTAAG +
Preference number: 4 (lower is better)
Translates to: RLKEIHVRSQSWGWCTCLLLVSL*FLFQFK
Trigger: CTTAAACTGGAACAAGAATCAAAGGCTTACCAGAAG...CAGACATGTGCACCACCCCCAGGATTGTGATCTCACATGTATTTCTTTAAGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000239860.10
ENST00000379864.6
ENST00000491049.6
ENST00000503173.5
ENST00000506800.5
CDS-3UTR TCA 90 bp AATACATGTGAGATCACAATCCTGGGGGTGGTGCACATGTCTGAGTATTTTACTTACGGCGTTCATTGTTaGTCTTCTGGTAAGCCTTTG +
Preference number: 4 (lower is better)
Translates to: NTCEITILGVVHMSEYFTYGVHC*SSGKPL
Trigger: CAAAGGCTTACCAGAAGATCAACAATGAACGCCGTA...AGTAAAATACTCAGACATGTGCACCACCCCCAGGATTGTGATCTCACATGTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000239860.10
ENST00000379864.6
ENST00000491049.6
ENST00000503173.5
ENST00000506800.5
CDS-3UTR TCA 90 bp ATACATGTGAGATCACAATCCTGGGGGTGGTGCACATGTCTGAGTATTTTACTTATGTCTCCAAGCAGCTaGCCTTTAAAGGGTCCAATT +
Preference number: 4 (lower is better)
Translates to: IHVRSQSWGWCTCLSILLMSPSS*PLKGPI
Trigger: AATTGGACCCTTTAAAGGTCAGCTGCTTGGAGACAT...AAGTAAAATACTCAGACATGTGCACCACCCCCAGGATTGTGATCTCACATGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000239860.10
ENST00000379864.6
ENST00000491049.6
ENST00000503173.5
ENST00000506800.5
CDS-3UTR TCA 90 bp AATACATGTGAGATCACAATCCTGGGGGTGGTGCACATGTCTGAGTATTTTACTATGTCTCCAAGCAGCTaGCCTTTAAAGGGTCCAATT +
Preference number: 4 (lower is better)
Translates to: NTCEITILGVVHMSEYFTMSPSS*PLKGPI
Trigger: AATTGGACCCTTTAAAGGTCAGCTGCTTGGAGACAT...AGTAAAATACTCAGACATGTGCACCACCCCCAGGATTGTGATCTCACATGTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000239860.10
ENST00000379864.6
ENST00000491049.6
ENST00000503173.5
ENST00000506800.5
CDS-3UTR TCA 90 bp AGGCTTAAAGAAATACATGTGAGATCACAATCCTGGGGGTGGTGCACATGTCTGTTAAAGAAATACATGTaGGATCACAATCCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: RLKEIHVRSQSWGWCTCLLKKYM*DHNPGG
Trigger: ACCCCCAGGATTGTGATCTCACATGTATTTCTTTAA...CAGACATGTGCACCACCCCCAGGATTGTGATCTCACATGTATTTCTTTAAGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000239860.10
ENST00000379864.6
ENST00000491049.6
ENST00000503173.5
ENST00000506800.5
CDS-3UTR TCA 90 bp ACAATTTCCTGGGGGAGGCTTAAAGAAATACATGTGAGATCACAATCCTGGGGGGGGATGGTTTTGGGATaGAACTGTTTCAGATTAATC +
Preference number: 4 (lower is better)
Translates to: TISWGRLKEIHVRSQSWGGMVLG*NCFRLI
Trigger: GATTAATCTGAAACAGTTTCATCCCAAAACCATCCC...CCCCCAGGATTGTGATCTCACATGTATTTCTTTAAGCCTCCCCCAGGAAATTGT
43% GC, longest homopolymer 8 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000379864.6
CDS-3UTR TCA 90 bp AGAAATACATGTGAGATCACAATCCTGGGGGTGGTGCACATGTCTGAGTATTTTCCATATACAGAAGGATaGAACTGGACCCCTACCTTT +
Preference number: 4 (lower is better)
Translates to: RNTCEITILGVVHMSEYFPYTEG*NWTPTF
Trigger: AAAGGTAGGGGTCCAGTTTCATCCTTCTGTATATGG...AAAATACTCAGACATGTGCACCACCCCCAGGATTGTGATCTCACATGTATTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379864.6
CDS-3UTR TCA 90 bp AGGCTTAAAGAAATACATGTGAGATCACAATCCTGGGGGTGGTGCACATGTCTGACCCTAACAAAGGCTTaGAAAGAAGAAACTGAACTG +
Preference number: 4 (lower is better)
Translates to: RLKEIHVRSQSWGWCTCLTLTKA*KEETEL
Trigger: CAGTTCAGTTTCTTCTTTTCAAGCCTTTGTTAGGGT...CAGACATGTGCACCACCCCCAGGATTGTGATCTCACATGTATTTCTTTAAGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379864.6
CDS-3UTR GCA 90 bp AGAAATACATGTGAGATCACAATCCTGGGGGTGGTGCACATGTCTGAGTATTTTAAACCCTACAGACTCTaGCAAAAGGGTCCTGGAATT +
Preference number: 4 (lower is better)
Translates to: RNTCEITILGVVHMSEYFKPYRL*QKGPGI
Trigger: AATTCCAGGACCCTTTTGGCAGAGTCTGTAGGGTTT...AAAATACTCAGACATGTGCACCACCCCCAGGATTGTGATCTCACATGTATTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379864.6
CDS-3UTR CCA 90 bp AAAGAAATACATGTGAGATCACAATCCTGGGGGTGGTGCACATGTCTGAGTATTCAATATGGATGCAGCTaGAGGCCATTTTCCTATGCA +
Preference number: 4 (lower is better)
Translates to: KEIHVRSQSWGWCTCLSIQYGCS*RPFSYA
Trigger: TGCATAGGAAAATGGCCTCCAGCTGCATCCATATTG...AATACTCAGACATGTGCACCACCCCCAGGATTGTGATCTCACATGTATTTCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379864.6
CDS-3UTR TCA 90 bp ATACATGTGAGATCACAATCCTGGGGGTGGTGCACATGTCTGAGTATTTTACTTCCATCAACAGTGGACTaGGTAAAGAAAATGTGCTAC +
Preference number: 4 (lower is better)
Translates to: IHVRSQSWGWCTCLSILLPSTVD*VKKMCY
Trigger: GTAGCACATTTTCTTTACTCAGTCCACTGTTGATGG...AAGTAAAATACTCAGACATGTGCACCACCCCCAGGATTGTGATCTCACATGTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379864.6
CDS-3UTR TCA 90 bp AAAGAAATACATGTGAGATCACAATCCTGGGGGTGGTGCACATGTCTGAGTATTACAAGAAGCAGAAAATaGAACCCGAAACCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: KEIHVRSQSWGWCTCLSITRSRK*NPKPGE
Trigger: TTCTCCTGGTTTCGGGTTTCATTTTCTGCTTCTTGT...AATACTCAGACATGTGCACCACCCCCAGGATTGTGATCTCACATGTATTTCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379864.6
CDS-3UTR GCA 90 bp GAAATACATGTGAGATCACAATCCTGGGGGTGGTGCACATGTCTGAGTATTTTATCAAATATTGAGAGTTaGACTGCATCCTTCTTGCGG +
Preference number: 4 (lower is better)
Translates to: EIHVRSQSWGWCTCLSILSNIES*TASFLR
Trigger: CCGCAAGAAGGATGCAGTGCAACTCTCAATATTTGA...TAAAATACTCAGACATGTGCACCACCCCCAGGATTGTGATCTCACATGTATTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503173.5
CDS-3UTR GCA 90 bp AGGGTCCTGGAATTGATAAACAACTTCGGTAAAGTTTCAGGATACAAAATCAATATGATCACAGCTCACTaGAGCCTTGACTTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: RVLELINNFGKVSGYKINMITAH*SLDLPG
Trigger: GCCTGGCAAGTCAAGGCTGCAGTGAGCTGTGATCAT...ATTGATTTTGTATCCTGAAACTTTACCGAAGTTGTTTATCAATTCCAGGACCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379864.6
CDS-3UTR GCA 90 bp AATACATGTGAGATCACAATCCTGGGGGTGGTGCACATGTCTGAGTATTTTACTAGGGTTTCATTCAGTTaGCTAGCCTTAAGTGTAGTG +
Preference number: 4 (lower is better)
Translates to: NTCEITILGVVHMSEYFTRVSFS*LALSVV
Trigger: CACTACACTTAAGGCTAGGCAACTGAATGAAACCCT...AGTAAAATACTCAGACATGTGCACCACCCCCAGGATTGTGATCTCACATGTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379864.6
CDS-3UTR CCA 90 bp ACAATTTCCTGGGGGAGGCTTAAAGAAATACATGTGAGATCACAATCCTGGGGGTTCTGTACAATTTCCTaGGGGAGGCTTAAAGAAATA +
Preference number: 4 (lower is better)
Translates to: TISWGRLKEIHVRSQSWGFCTIS*GRLKEI
Trigger: TATTTCTTTAAGCCTCCCCCAGGAAATTGTACAGAA...CCCCCAGGATTGTGATCTCACATGTATTTCTTTAAGCCTCCCCCAGGAAATTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000379864.6
CDS-3UTR CCA 90 bp CTATGCAAATTAACACAGAAGCAGGAAACCAAATACTGCATGTTCTCGCTTACATGGTGCTGGAATAGCTaGCTAGCCATATACAGAAGG +
Preference number: 4 (lower is better)
Translates to: LCKLTQKQETKYCMFSLTWCWNS*LAIYRR
Trigger: CCTTCTGTATATGGCTAGCCAGCTATTCCAGCACCA...TGTAAGCGAGAACATGCAGTATTTGGTTTCCTGCTTCTGTGTTAATTTGCATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379864.6
CDS-3UTR CCA 90 bp AAAGAAATACATGTGAGATCACAATCCTGGGGGTGGTGCACATGTCTGAGTATTTTCAACAAATGGTGCTaGAATAGCTGGCTAGCCATA +
Preference number: 4 (lower is better)
Translates to: KEIHVRSQSWGWCTCLSIFNKWC*NSWLAI
Trigger: TATGGCTAGCCAGCTATTCCAGCACCATTTGTTGAA...AATACTCAGACATGTGCACCACCCCCAGGATTGTGATCTCACATGTATTTCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379864.6
CDS-3UTR CCA 90 bp CTTAAAGAAATACATGTGAGATCACAATCCTGGGGGTGGTGCACATGTCTGAGTAGACACAGAGACCAATaGAACAGAATAAAGAACCCA +
Preference number: 4 (lower is better)
Translates to: LKEIHVRSQSWGWCTCLSRHRDQ*NRIKNP
Trigger: TGGGTTCTTTATTCTGTTCCATTGGTCTCTGTGTCT...ACTCAGACATGTGCACCACCCCCAGGATTGTGATCTCACATGTATTTCTTTAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379864.6
CDS-3UTR CCA 90 bp CTTAAAGAAATACATGTGAGATCACAATCCTGGGGGTGGTGCACATGTCTGAGTAAAGGAAAAAGCCAGTaGCAACACATTACCAGACTT +
Preference number: 4 (lower is better)
Translates to: LKEIHVRSQSWGWCTCLSKGKSQ*QHITRL
Trigger: AAGTCTGGTAATGTGTTGCCACTGGCTTTTTCCTTT...ACTCAGACATGTGCACCACCCCCAGGATTGTGATCTCACATGTATTTCTTTAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000379864.6
CDS-3UTR CCA 90 bp GAAATACATGTGAGATCACAATCCTGGGGGTGGTGCACATGTCTGAGTATTTTAGTGTTAAACTCTCTGTaGGGTGAAGCTCACTCTATA +
Preference number: 4 (lower is better)
Translates to: EIHVRSQSWGWCTCLSILVLNSL*GEAHSI
Trigger: TATAGAGTGAGCTTCACCCCACAGAGAGTTTAACAC...TAAAATACTCAGACATGTGCACCACCCCCAGGATTGTGATCTCACATGTATTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379864.6
3UTR CAA 72 bp AATGTGCTACATATACACCAGCAGTTCCCAACCCTTTaGACACCAAGGGCTGGTTTCATGGAAAACAATTTT +
Preference number: 4 (lower is better)
Translates to: NVLHIHQQFPTL*TPRAGFMENNF
Trigger: AAAATTGTTTTCCATGAAACCAGCCCTTGGTGTCAAAAGGGTTGGGAACTGCTGGTGTATATGTAGCACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379864.6
CDS-3UTR TCA 90 bp TCTTTTAAGAGGAGGCAAGTCCTAGTATCAATTTCCCTCAGGTTCTTTTGCTCCCTTCTGGTAAGCCTTTaGTTCTTGTTCCAGTTTAAG +
Preference number: 4 (lower is better)
Translates to: SFKRRQVLVSISLRFFCSLLVSL*FLFQFK
Trigger: CTTAAACTGGAACAAGAATCAAAGGCTTACCAGAAG...GGAGCAAAAGAACCTGAGGGAAATTGATACTAGGACTTGCCTCCTCTTAAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506800.5
CDS-3UTR TCA 90 bp CTTAAAGAAATACATGTGAGATCACAATCCTGGGGGTGGTGCACATGTCTGAGTGTGTTTAAGGATTCCTaGAGAGTTTCCATGGATTTT +
Preference number: 4 (lower is better)
Translates to: LKEIHVRSQSWGWCTCLSVFKDS*RVSMDF
Trigger: AAAATCCATGGAAACTCTTCAGGAATCCTTAAACAC...ACTCAGACATGTGCACCACCCCCAGGATTGTGATCTCACATGTATTTCTTTAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000239860.10
CDS-3UTR TCA 90 bp AAAGAAATACATGTGAGATCACAATCCTGGGGGTGGTGCACATGTCTGAGTATTTTAAAGAAATACATGTaGGATCACAATCCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: KEIHVRSQSWGWCTCLSILKKYM*DHNPGG
Trigger: ACCCCCAGGATTGTGATCTCACATGTATTTCTTTAA...AATACTCAGACATGTGCACCACCCCCAGGATTGTGATCTCACATGTATTTCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000239860.10
ENST00000379864.6
ENST00000491049.6
ENST00000503173.5
ENST00000506800.5
CDS-3UTR TCA 90 bp AATACATGTGAGATCACAATCCTGGGGGTGGTGCACATGTCTGAGTATTTTACTTTAAAGAAATACATGTaGGATCACAATCCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: NTCEITILGVVHMSEYFTLKKYM*DHNPGG
Trigger: ACCCCCAGGATTGTGATCTCACATGTATTTCTTTAA...AGTAAAATACTCAGACATGTGCACCACCCCCAGGATTGTGATCTCACATGTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000239860.10
ENST00000379864.6
ENST00000491049.6
ENST00000503173.5
ENST00000506800.5
CDS-3UTR TCA 90 bp ATACATGTGAGATCACAATCCTGGGGGTGGTGCACATGTCTGAGTATTTTACTTTTAAAGAAATACATGTaGGATCACAATCCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: IHVRSQSWGWCTCLSILLLKKYM*DHNPGG
Trigger: ACCCCCAGGATTGTGATCTCACATGTATTTCTTTAA...AAGTAAAATACTCAGACATGTGCACCACCCCCAGGATTGTGATCTCACATGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000239860.10
ENST00000379864.6
ENST00000491049.6
ENST00000503173.5
ENST00000506800.5
CDS-3UTR GCA 90 bp AGGCTTAAAGAAATACATGTGAGATCACAATCCTGGGGGTGGTGCACATGTCTGCTACCTTTCACCATATaGAAAAATTACCTCAAGATG +
Preference number: 4 (lower is better)
Translates to: RLKEIHVRSQSWGWCTCLLPFTI*KNYLKM
Trigger: CATCTTGAGGTAATTTTTGCATATGGTGAAAGGTAG...CAGACATGTGCACCACCCCCAGGATTGTGATCTCACATGTATTTCTTTAAGCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000379864.6
CDS-3UTR CCA 90 bp AGAAATACATGTGAGATCACAATCCTGGGGGTGGTGCACATGTCTGAGTATTTTCCAAACAAAGCATGGTaGTTTCATGTAGTTGAGAAG +
Preference number: 4 (lower is better)
Translates to: RNTCEITILGVVHMSEYFPNKAW*FHVVEK
Trigger: CTTCTCAACTACATGAAACCACCATGCTTTGTTTGG...AAAATACTCAGACATGTGCACCACCCCCAGGATTGTGATCTCACATGTATTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379864.6
CDS-3UTR TCA 90 bp ATACATGTGAGATCACAATCCTGGGGGTGGTGCACATGTCTGAGTATTTTACTTGAAACTGTAAGAAACTaGAACAACTCAGCAAGCAAA +
Preference number: 4 (lower is better)
Translates to: IHVRSQSWGWCTCLSILLETVRN*NNSASK
Trigger: TTTGCTTGCTGAGTTGTTTCAGTTTCTTACAGTTTC...AAGTAAAATACTCAGACATGTGCACCACCCCCAGGATTGTGATCTCACATGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379864.6
CDS-3UTR TCA 90 bp AATCCTTCGTATACTATTCCTGAGGAATGGTCACCTAATCTCTGCTTAAGCAATTATCAGAAGGCACACTaGCAGCAATCAAATACACAC +
Preference number: 4 (lower is better)
Translates to: NPSYTIPEEWSPNLCLSNYQKAH*QQSNTH
Trigger: GTGTGTATTTGATTGCTGTCAGTGTGCCTTCTGATA...ATTGCTTAAGCAGAGATTAGGTGACCATTCCTCAGGAATAGTATACGAAGGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379864.6
CDS-3UTR GCA 90 bp AATACATGTGAGATCACAATCCTGGGGGTGGTGCACATGTCTGAGTATTTTACTATTCACAAGAGTTCGTaGTCCTATGAGGATTTAATG +
Preference number: 4 (lower is better)
Translates to: NTCEITILGVVHMSEYFTIHKSS*SYEDLM
Trigger: CATTAAATCCTCATAGGAGCACGAACTCTTGTGAAT...AGTAAAATACTCAGACATGTGCACCACCCCCAGGATTGTGATCTCACATGTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379864.6
CDS-3UTR GCA 90 bp AAACCTACAGAATGGGAGAAAATATCCATGAACTATGCATCTGACAAAGGTCTACTATTCAACAAATGGTaGTGGAATAGCTGGCTAGCC +
Preference number: 4 (lower is better)
Translates to: KPTEWEKISMNYASDKGLLFNKW*WNSWLA
Trigger: GGCTAGCCAGCTATTCCAGCACCATTTGTTGAATAG...TAGACCTTTGTCAGATGCATAGTTCATGGATATTTTCTCCCATTCTGTAGGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379864.6
CDS-3UTR GCA 90 bp GAAATACATGTGAGATCACAATCCTGGGGGTGGTGCACATGTCTGAGTATTTTATGGTCACCTAATCTCTaGTTAAGCAATTTCAACGAT +
Preference number: 4 (lower is better)
Translates to: EIHVRSQSWGWCTCLSILWSPNL*LSNFND
Trigger: ATCGTTGAAATTGCTTAAGCAGAGATTAGGTGACCA...TAAAATACTCAGACATGTGCACCACCCCCAGGATTGTGATCTCACATGTATTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379864.6
CDS-3UTR CCA 90 bp ATGCACTTGCATGTTCATCGCAGCACTATTCACAATAGTAAAGATACAGAATCAACTATGCTCAGTCCCTaGGTGATGGGATTATTTGTG +
Preference number: 4 (lower is better)
Translates to: MHLHVHRSTIHNSKDTESTMLSP*VMGLFV
Trigger: CACAAATAATCCCATCACCCAGGGACTGAGCATAGT...TGATTCTGTATCTTTACTATTGTGAATAGTGCTGCGATGAACATGCAAGTGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379864.6
CDS-3UTR CCA 90 bp ATGCACTTGCATGTTCATCGCAGCACTATTCACAATAGTAAAGATACAGAATCACCCTTGAGAGGTGGCTaGATATTAAGACATGTAAGC +
Preference number: 4 (lower is better)
Translates to: MHLHVHRSTIHNSKDTESPLRGG*ILRHVS
Trigger: GCTTACATGTCTTAATATCCAGCCACCTCTCAAGGG...TGATTCTGTATCTTTACTATTGTGAATAGTGCTGCGATGAACATGCAAGTGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379864.6
3UTR CAA 72 bp GAAAACCCTACAGACTCTGCCAAAAGGGTCCTGGAATaGATAAACAACTTCGGTAAAGTTTCAGGATACAAA +
Preference number: 4 (lower is better)
Translates to: ENPTDSAKRVLE*INNFGKVSGYK
Trigger: TTTGTATCCTGAAACTTTACCGAAGTTGTTTATCAATTCCAGGACCCTTTTGGCAGAGTCTGTAGGGTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379864.6
CDS-3UTR TCA 90 bp AATCCTTCGTATACTATTCCTGAGGAATGGTCACCTAATCTCTGCTTAAGCAATAAGGAGAGCAAACATTaGCAAATAACTTTCGGCTAC +
Preference number: 4 (lower is better)
Translates to: NPSYTIPEEWSPNLCLSNKESKH*QITFGY
Trigger: GTAGCCGAAAGTTATTTGTCAATGTTTGCTCTCCTT...ATTGCTTAAGCAGAGATTAGGTGACCATTCCTCAGGAATAGTATACGAAGGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379864.6
CDS-3UTR CCA 90 bp ATGCACTTGCATGTTCATCGCAGCACTATTCACAATAGTAAAGATACAGAATCATCCTTTGTAACAATATaGATGCAGCTGGAGGCCATT +
Preference number: 4 (lower is better)
Translates to: MHLHVHRSTIHNSKDTESSFVTI*MQLEAI
Trigger: AATGGCCTCCAGCTGCATCCATATTGTTACAAAGGA...TGATTCTGTATCTTTACTATTGTGAATAGTGCTGCGATGAACATGCAAGTGCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379864.6
CDS-3UTR CCA 90 bp AATACATGTGAGATCACAATCCTGGGGGTGGTGCACATGTCTGAGTATTTTACTAGAAAACCTACAGAATaGGAGAAAATATCCATGAAC +
Preference number: 4 (lower is better)
Translates to: NTCEITILGVVHMSEYFTRKPTE*EKISMN
Trigger: GTTCATGGATATTTTCTCCCATTCTGTAGGTTTTCT...AGTAAAATACTCAGACATGTGCACCACCCCCAGGATTGTGATCTCACATGTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000379864.6
CDS-3UTR CCA 90 bp AAACCTACAGAATGGGAGAAAATATCCATGAACTATGCATCTGACAAAGGTCTATCCCTATTCAACAAATaGTGCTGGAATAGCTGGCTA +
Preference number: 4 (lower is better)
Translates to: KPTEWEKISMNYASDKGLSLFNK*CWNSWL
Trigger: TAGCCAGCTATTCCAGCACCATTTGTTGAATAGGGA...TAGACCTTTGTCAGATGCATAGTTCATGGATATTTTCTCCCATTCTGTAGGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379864.6
CDS-3UTR TCA 90 bp ATGCACTTGCATGTTCATCGCAGCACTATTCACAATAGTAAAGATACAGAATCACTTCTGGTAAGCCTTTaGTTCTTGTTCCAGTTTAAG +
Preference number: 4 (lower is better)
Translates to: MHLHVHRSTIHNSKDTESLLVSL*FLFQFK
Trigger: CTTAAACTGGAACAAGAATCAAAGGCTTACCAGAAG...TGATTCTGTATCTTTACTATTGTGAATAGTGCTGCGATGAACATGCAAGTGCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379864.6
CDS-3UTR TCA 90 bp ATGCACTTGCATGTTCATCGCAGCACTATTCACAATAGTAAAGATACAGAATCAATACCTACAGCCATCTaGTCTTCAACAGTCAACAAA +
Preference number: 4 (lower is better)
Translates to: MHLHVHRSTIHNSKDTESIPTAI*SSTVNK
Trigger: TTTGTTGACTGTTGAAGATCAGATGGCTGTAGGTAT...TGATTCTGTATCTTTACTATTGTGAATAGTGCTGCGATGAACATGCAAGTGCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379864.6
CDS-3UTR CCA 90 bp CTATGCAAATTAACACAGAAGCAGGAAACCAAATACTGCATGTTCTCGCTTACAACACTTAGACACTGTTaGTGGGAATGTGAATTAGTT +
Preference number: 4 (lower is better)
Translates to: LCKLTQKQETKYCMFSLTTLRHC*WECELV
Trigger: AACTAATTCACATTCCCACCAACAGTGTCTAAGTGT...TGTAAGCGAGAACATGCAGTATTTGGTTTCCTGCTTCTGTGTTAATTTGCATAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379864.6
CDS-3UTR TCA 90 bp AAACCTACAGAATGGGAGAAAATATCCATGAACTATGCATCTGACAAAGGTCTATCACCAGAAACAGACTaGGAAATGAAAAAGATACTG +
Preference number: 4 (lower is better)
Translates to: KPTEWEKISMNYASDKGLSPETD*EMKKIL
Trigger: CAGTATCTTTTTCATTTCTCAGTCTGTTTCTGGTGA...TAGACCTTTGTCAGATGCATAGTTCATGGATATTTTCTCCCATTCTGTAGGTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379864.6
CDS-3UTR CCA 90 bp CTATGCAAATTAACACAGAAGCAGGAAACCAAATACTGCATGTTCTCGCTTACAAGGAACAATATCAAGTaGTTTACAACAGGCTGTAAT +
Preference number: 4 (lower is better)
Translates to: LCKLTQKQETKYCMFSLTRNNIK*FTTGCN
Trigger: ATTACAGCCTGTTGTAAACCACTTGATATTGTTCCT...TGTAAGCGAGAACATGCAGTATTTGGTTTCCTGCTTCTGTGTTAATTTGCATAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379864.6
CDS-3UTR CAA 90 bp CAGGCGGGCCAGAGTGCTTTTTGTCCGAGGCATGTCCTATTCTCTGGTCCAGCCGGGCCAGAGTGCTTTTaGTCCGAGGCATGTCCTATT +
Preference number: 5 (lower is better)
Translates to: QAGQSAFCPRHVLFSGPAGPECF*SEACPI
Trigger: AATAGGACATGCCTCGGACAAAAAGCACTCTGGCCC...GGCTGGACCAGAGAATAGGACATGCCTCGGACAAAAAGCACTCTGGCCCGCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506800.5
CDS-3UTR CAA 90 bp AGGCGGGCCAGAGTGCTTTTTGTCCGAGGCATGTCCTATTCTCTGGTCCAGCCATCCATTCACTACTTCTaGCGGACTTCTTCCAGCAAC +
Preference number: 5 (lower is better)
Translates to: RRARVLFVRGMSYSLVQPSIHYF*RTSSSN
Trigger: GTTGCTGGAAGAAGTCCGCAAGAAGTAGTGAATGGA...TGGCTGGACCAGAGAATAGGACATGCCTCGGACAAAAAGCACTCTGGCCCGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506800.5
CDS-3UTR CAA 90 bp ATTTCCTGGGGGAGGCTTAAAGAAATACATGTGAGATCACAATCCTGGGGGTGGTGCTGTTTCAGGCGGTaGGTGCTCACACCGTCGAAG +
Preference number: 5 (lower is better)
Translates to: ISWGRLKEIHVRSQSWGWCCFRR*VLTPSK
Trigger: CTTCGACGGTGTGAGCACCAACCGCCTGAAACAGCA...CCACCCCCAGGATTGTGATCTCACATGTATTTCTTTAAGCCTCCCCCAGGAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000239860.10
ENST00000379864.6
ENST00000491049.6
ENST00000503173.5
ENST00000506800.5
CDS-3UTR CAA 90 bp ACAATTTCCTGGGGGAGGCTTAAAGAAATACATGTGAGATCACAATCCTGGGGGTGCTGTTTCAGGCGGTaGGTGCTCACACCGTCGAAG +
Preference number: 5 (lower is better)
Translates to: TISWGRLKEIHVRSQSWGCCFRR*VLTPSK
Trigger: CTTCGACGGTGTGAGCACCAACCGCCTGAAACAGCA...CCCCCAGGATTGTGATCTCACATGTATTTCTTTAAGCCTCCCCCAGGAAATTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000239860.10
ENST00000379864.6
ENST00000491049.6
ENST00000503173.5
ENST00000506800.5
CDS CCA 90 bp GAAGCCTGGATTCCTGAAGGCATTATACAGCCACTGCACCACCCCTaGACTGCAAACCTCATACTTTCACTGGCATTCGTTCATAGACAC +
Preference number: 5 (lower is better)
Translates to: EAWIPEGIIQPLHHP*TANLILSLAFVHRH
Trigger: GTGTCTATGAACGAATGCCAGTGAAAGTATGAGGTTTGCAGTCCAGGGGTGGTGCAGTGGCTGTATAATGCCTTCAGGAATCCAGGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477250.1
CDS-3UTR CAA 90 bp ACAATTTCCTGGGGGAGGCTTAAAGAAATACATGTGAGATCACAATCCTGGGGGGACACACAGCCAAGGTaGAGGACCCATGTAAGCAGG +
Preference number: 5 (lower is better)
Translates to: TISWGRLKEIHVRSQSWGDTQPR*RTHVSR
Trigger: CCTGCTTACATGGGTCCTCAACCTTGGCTGTGTGTC...CCCCCAGGATTGTGATCTCACATGTATTTCTTTAAGCCTCCCCCAGGAAATTGT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000239860.10
ENST00000379864.6
ENST00000491049.6
ENST00000503173.5
ENST00000506800.5
CDS-3UTR CAA 90 bp ATTTCCTGGGGGAGGCTTAAAGAAATACATGTGAGATCACAATCCTGGGGGTGGCAGTTCCCAACCCTTTaGACACCAAGGGCTGGTTTC +
Preference number: 5 (lower is better)
Translates to: ISWGRLKEIHVRSQSWGWQFPTL*TPRAGF
Trigger: GAAACCAGCCCTTGGTGTCAAAAGGGTTGGGAACTG...CCACCCCCAGGATTGTGATCTCACATGTATTTCTTTAAGCCTCCCCCAGGAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000379864.6
CDS-3UTR CAA 90 bp GAAATACATGTGAGATCACAATCCTGGGGGTGGTGCACATGTCTGAGTATTTTATGCTGTTTCAGGCGGTaGGTGCTCACACCGTCGAAG +
Preference number: 5 (lower is better)
Translates to: EIHVRSQSWGWCTCLSILCCFRR*VLTPSK
Trigger: CTTCGACGGTGTGAGCACCAACCGCCTGAAACAGCA...TAAAATACTCAGACATGTGCACCACCCCCAGGATTGTGATCTCACATGTATTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000239860.10
ENST00000379864.6
ENST00000491049.6
ENST00000503173.5
ENST00000506800.5
CDS-3UTR CAA 90 bp AATACATGTGAGATCACAATCCTGGGGGTGGTGCACATGTCTGAGTATTTTACTTGCTGTTTCAGGCGGTaGGTGCTCACACCGTCGAAG +
Preference number: 5 (lower is better)
Translates to: NTCEITILGVVHMSEYFTCCFRR*VLTPSK
Trigger: CTTCGACGGTGTGAGCACCAACCGCCTGAAACAGCA...AGTAAAATACTCAGACATGTGCACCACCCCCAGGATTGTGATCTCACATGTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000239860.10
ENST00000379864.6
ENST00000491049.6
ENST00000503173.5
ENST00000506800.5
CDS-3UTR CAA 90 bp AGGCTTAAAGAAATACATGTGAGATCACAATCCTGGGGGTGGTGCACATGTCTGGGGCCAGAGTGCTTTTaGTCCGAGGCATGTCCTATT +
Preference number: 5 (lower is better)
Translates to: RLKEIHVRSQSWGWCTCLGPECF*SEACPI
Trigger: AATAGGACATGCCTCGGACAAAAAGCACTCTGGCCC...CAGACATGTGCACCACCCCCAGGATTGTGATCTCACATGTATTTCTTTAAGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000239860.10
ENST00000379864.6
ENST00000491049.6
ENST00000503173.5
ENST00000506800.5
CDS-3UTR CAA 90 bp ATTTCCTGGGGGAGGCTTAAAGAAATACATGTGAGATCACAATCCTGGGGGTGGTTGCATCCTAGGCAGTaGATCCACCTGTTGCCTTTT +
Preference number: 5 (lower is better)
Translates to: ISWGRLKEIHVRSQSWGWLHPRQ*IHLLPF
Trigger: AAAAGGCAACAGGTGGATCAACTGCCTAGGATGCAA...CCACCCCCAGGATTGTGATCTCACATGTATTTCTTTAAGCCTCCCCCAGGAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000239860.10
ENST00000379864.6
ENST00000491049.6
ENST00000503173.5
ENST00000506800.5
CDS-3UTR CAA 90 bp AGAAGGCACACTGACAGCAATCAAATACACACCTCCACCACTGCAGGAATCCTTTCCATTCACTACTTCTaGCGGACTTCTTCCAGCAAC +
Preference number: 5 (lower is better)
Translates to: RRHTDSNQIHTSTTAGILSIHYF*RTSSSN
Trigger: GTTGCTGGAAGAAGTCCGCAAGAAGTAGTGAATGGA...AAGGATTCCTGCAGTGGTGGAGGTGTGTATTTGATTGCTGTCAGTGTGCCTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379864.6
CDS-3UTR CAA 90 bp CTTAAAGAAATACATGTGAGATCACAATCCTGGGGGTGGTGCACATGTCTGAGTGGGCCAGAGTGCTTTTaGTCCGAGGCATGTCCTATT +
Preference number: 5 (lower is better)
Translates to: LKEIHVRSQSWGWCTCLSGPECF*SEACPI
Trigger: AATAGGACATGCCTCGGACAAAAAGCACTCTGGCCC...ACTCAGACATGTGCACCACCCCCAGGATTGTGATCTCACATGTATTTCTTTAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000239860.10
ENST00000379864.6
ENST00000491049.6
ENST00000503173.5
ENST00000506800.5
CDS-3UTR CAA 90 bp GAAATACATGTGAGATCACAATCCTGGGGGTGGTGCACATGTCTGAGTATTTTAGACACACAGCCAAGGTaGAGGACCCATGTAAGCAGG +
Preference number: 5 (lower is better)
Translates to: EIHVRSQSWGWCTCLSILDTQPR*RTHVSR
Trigger: CCTGCTTACATGGGTCCTCAACCTTGGCTGTGTGTC...TAAAATACTCAGACATGTGCACCACCCCCAGGATTGTGATCTCACATGTATTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000239860.10
ENST00000379864.6
ENST00000491049.6
ENST00000503173.5
ENST00000506800.5
CDS-3UTR CAA 90 bp ATACATGTGAGATCACAATCCTGGGGGTGGTGCACATGTCTGAGTATTTTACTTGACACACAGCCAAGGTaGAGGACCCATGTAAGCAGG +
Preference number: 5 (lower is better)
Translates to: IHVRSQSWGWCTCLSILLDTQPR*RTHVSR
Trigger: CCTGCTTACATGGGTCCTCAACCTTGGCTGTGTGTC...AAGTAAAATACTCAGACATGTGCACCACCCCCAGGATTGTGATCTCACATGTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000239860.10
ENST00000379864.6
ENST00000491049.6
ENST00000503173.5
ENST00000506800.5
CDS GCA 90 bp GATACAGTTCTAACTCCCAATGAAATGTCAAGGGGAATTACTGGGTaGAGCATCTTAGAAAGCTCTTTGAAGGGGAGTAGACGTGACCGG +
Preference number: 5 (lower is better)
Translates to: DTVLTPNEMSRGITG*SILESSLKGSRRDR
Trigger: CCGGTCACGTCTACTCCCCTTCAAAGAGCTTTCTAAGATGCTGCACCCAGTAATTCCCCTTGACATTTCATTGGGAGTTAGAACTGTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477250.1
CDS-3UTR CAA 90 bp AATACATGTGAGATCACAATCCTGGGGGTGGTGCACATGTCTGAGTATTTTACTTGCACTGCATCCTTCTaGCGGACTTCTTCCAGCAAC +
Preference number: 5 (lower is better)
Translates to: NTCEITILGVVHMSEYFTCTASF*RTSSSN
Trigger: GTTGCTGGAAGAAGTCCGCAAGAAGGATGCAGTGCA...AGTAAAATACTCAGACATGTGCACCACCCCCAGGATTGTGATCTCACATGTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503173.5
CDS-3UTR CAA 90 bp AGGCTTAAAGAAATACATGTGAGATCACAATCCTGGGGGTGGTGCACATGTCTGTTGCATCCTAGGCAGTaGATCCACCTGTTGCCTTTT +
Preference number: 5 (lower is better)
Translates to: RLKEIHVRSQSWGWCTCLLHPRQ*IHLLPF
Trigger: AAAAGGCAACAGGTGGATCAACTGCCTAGGATGCAA...CAGACATGTGCACCACCCCCAGGATTGTGATCTCACATGTATTTCTTTAAGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000239860.10
ENST00000379864.6
ENST00000491049.6
ENST00000503173.5
ENST00000506800.5
CDS-3UTR CAA 90 bp AGGCTTAAAGAAATACATGTGAGATCACAATCCTGGGGGTGGTGCACATGTCTGTCCATTCACTACTTCTaGCGGACTTCTTCCAGCAAC +
Preference number: 5 (lower is better)
Translates to: RLKEIHVRSQSWGWCTCLSIHYF*RTSSSN
Trigger: GTTGCTGGAAGAAGTCCGCAAGAAGTAGTGAATGGA...CAGACATGTGCACCACCCCCAGGATTGTGATCTCACATGTATTTCTTTAAGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000239860.10
ENST00000379864.6
ENST00000491049.6
ENST00000506800.5
CDS-3UTR CAA 90 bp AAAGAAATACATGTGAGATCACAATCCTGGGGGTGGTGCACATGTCTGAGTATTGGGCCAGAGTGCTTTTaGTCCGAGGCATGTCCTATT +
Preference number: 5 (lower is better)
Translates to: KEIHVRSQSWGWCTCLSIGPECF*SEACPI
Trigger: AATAGGACATGCCTCGGACAAAAAGCACTCTGGCCC...AATACTCAGACATGTGCACCACCCCCAGGATTGTGATCTCACATGTATTTCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000239860.10
ENST00000379864.6
ENST00000491049.6
ENST00000503173.5
ENST00000506800.5
CDS-3UTR CAA 90 bp AATACATGTGAGATCACAATCCTGGGGGTGGTGCACATGTCTGAGTATTTTACTGGGCCAGAGTGCTTTTaGTCCGAGGCATGTCCTATT +
Preference number: 5 (lower is better)
Translates to: NTCEITILGVVHMSEYFTGPECF*SEACPI
Trigger: AATAGGACATGCCTCGGACAAAAAGCACTCTGGCCC...AGTAAAATACTCAGACATGTGCACCACCCCCAGGATTGTGATCTCACATGTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000239860.10
ENST00000379864.6
ENST00000491049.6
ENST00000503173.5
ENST00000506800.5
CDS-3UTR CAA 90 bp ATTTCCTGGGGGAGGCTTAAAGAAATACATGTGAGATCACAATCCTGGGGGTGGTCAGCTCGAGGAGAGTaGGAAGAAGTTTCATTCAGT +
Preference number: 5 (lower is better)
Translates to: ISWGRLKEIHVRSQSWGWSARGE*EEVSFS
Trigger: ACTGAATGAAACTTCTTCCAACTCTCCTCGAGCTGA...CCACCCCCAGGATTGTGATCTCACATGTATTTCTTTAAGCCTCCCCCAGGAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000379864.6
CDS-3UTR CAA 90 bp AAAGAAATACATGTGAGATCACAATCCTGGGGGTGGTGCACATGTCTGAGTATTCTGAAGTGGCTGAAGTaGCAGAGCAGAGTACCAGAG +
Preference number: 5 (lower is better)
Translates to: KEIHVRSQSWGWCTCLSILKWLK*QSRVPE
Trigger: CTCTGGTACTCTGCTCTGCAACTTCAGCCACTTCAG...AATACTCAGACATGTGCACCACCCCCAGGATTGTGATCTCACATGTATTTCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379864.6
CDS-3UTR CAA 90 bp GAAATACATGTGAGATCACAATCCTGGGGGTGGTGCACATGTCTGAGTATTTTATTCCCTCAGGTTCTTTaGCTCCAGGGTACCAATGGC +
Preference number: 5 (lower is better)
Translates to: EIHVRSQSWGWCTCLSILFPQVL*LQGTNG
Trigger: GCCATTGGTACCCTGGAGCAAAAGAACCTGAGGGAA...TAAAATACTCAGACATGTGCACCACCCCCAGGATTGTGATCTCACATGTATTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506800.5
CDS-3UTR CAA 90 bp AATCCTTCGTATACTATTCCTGAGGAATGGTCACCTAATCTCTGCTTAAGCAATGACACACAGCCAAGGTaGAGGACCCATGTAAGCAGG +
Preference number: 5 (lower is better)
Translates to: NPSYTIPEEWSPNLCLSNDTQPR*RTHVSR
Trigger: CCTGCTTACATGGGTCCTCAACCTTGGCTGTGTGTC...ATTGCTTAAGCAGAGATTAGGTGACCATTCCTCAGGAATAGTATACGAAGGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379864.6
CDS-3UTR CAA 90 bp ACAATTTCCTGGGGGAGGCTTAAAGAAATACATGTGAGATCACAATCCTGGGGGCCTTTACTTCTGGCTTaGAGAGTAACAGGGGAAAGA +
Preference number: 5 (lower is better)
Translates to: TISWGRLKEIHVRSQSWGPLLLA*RVTGER
Trigger: TCTTTCCCCTGTTACTCTCAAAGCCAGAAGTAAAGG...CCCCCAGGATTGTGATCTCACATGTATTTCTTTAAGCCTCCCCCAGGAAATTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000379864.6
CDS-3UTR CAA 90 bp GAAATACATGTGAGATCACAATCCTGGGGGTGGTGCACATGTCTGAGTATTTTATTGCATCCTAGGCAGTaGATCCACCTGTTGCCTTTT +
Preference number: 5 (lower is better)
Translates to: EIHVRSQSWGWCTCLSILLHPRQ*IHLLPF
Trigger: AAAAGGCAACAGGTGGATCAACTGCCTAGGATGCAA...TAAAATACTCAGACATGTGCACCACCCCCAGGATTGTGATCTCACATGTATTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000239860.10
ENST00000379864.6
ENST00000491049.6
ENST00000503173.5
ENST00000506800.5
CDS-3UTR CAA 90 bp TGTCTGAGTATTTTACTTTTAGCTCTTCAGGTGAGTCTGACACACAGCCAAGGTTTGCATCCTAGGCAGTaGATCCACCTGTTGCCTTTT +
Preference number: 5 (lower is better)
Translates to: CLSILLLALQVSLTHSQGLHPRQ*IHLLPF
Trigger: AAAAGGCAACAGGTGGATCAACTGCCTAGGATGCAA...ACCTTGGCTGTGTGTCAGACTCACCTGAAGAGCTAAAAGTAAAATACTCAGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506800.5
CDS-3UTR CAA 90 bp GAAATACATGTGAGATCACAATCCTGGGGGTGGTGCACATGTCTGAGTATTTTATCCATTCACTACTTCTaGCGGACTTCTTCCAGCAAC +
Preference number: 5 (lower is better)
Translates to: EIHVRSQSWGWCTCLSILSIHYF*RTSSSN
Trigger: GTTGCTGGAAGAAGTCCGCAAGAAGTAGTGAATGGA...TAAAATACTCAGACATGTGCACCACCCCCAGGATTGTGATCTCACATGTATTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000239860.10
ENST00000379864.6
ENST00000491049.6
ENST00000506800.5
CDS-3UTR CAA 90 bp AGGCTTAAAGAAATACATGTGAGATCACAATCCTGGGGGTGGTGCACATGTCTGGTCTTAGTTCAAATATaGAGAGTTGCACTGCATCCT +
Preference number: 5 (lower is better)
Translates to: RLKEIHVRSQSWGWCTCLVLVQI*RVALHP
Trigger: AGGATGCAGTGCAACTCTCAATATTTGAACTAAGAC...CAGACATGTGCACCACCCCCAGGATTGTGATCTCACATGTATTTCTTTAAGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503173.5
CDS-3UTR CAA 90 bp CTTAAAGAAATACATGTGAGATCACAATCCTGGGGGTGGTGCACATGTCTGAGTTTGTCAGTATTGAGTTaGGCTTCCAGTTCCGTAATC +
Preference number: 5 (lower is better)
Translates to: LKEIHVRSQSWGWCTCLSLSVLS*ASSSVI
Trigger: GATTACGGAACTGGAAGCCAAACTCAATACTGACAA...ACTCAGACATGTGCACCACCCCCAGGATTGTGATCTCACATGTATTTCTTTAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503173.5
CDS-3UTR CAA 90 bp ACAATTTCCTGGGGGAGGCTTAAAGAAATACATGTGAGATCACAATCCTGGGGGCATTCACTACCTTCATaGTCAGTATTGAGTTTGGCT +
Preference number: 5 (lower is better)
Translates to: TISWGRLKEIHVRSQSWGHSLPS*SVLSLA
Trigger: AGCCAAACTCAATACTGACAATGAAGGTAGTGAATG...CCCCCAGGATTGTGATCTCACATGTATTTCTTTAAGCCTCCCCCAGGAAATTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000503173.5
CDS-3UTR CAA 90 bp CTTAAAGAAATACATGTGAGATCACAATCCTGGGGGTGGTGCACATGTCTGAGTCAGTTGATCCACCTGTaGCCTTTTAGAAACTTGATG +
Preference number: 5 (lower is better)
Translates to: LKEIHVRSQSWGWCTCLSQLIHL*PFRNLM
Trigger: CATCAAGTTTCTAAAAGGCAACAGGTGGATCAACTG...ACTCAGACATGTGCACCACCCCCAGGATTGTGATCTCACATGTATTTCTTTAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000239860.10
ENST00000379864.6
ENST00000491049.6
ENST00000503173.5
ENST00000506800.5
CDS-3UTR CAA 90 bp AGAAGGCACACTGACAGCAATCAAATACACACCTCCACCACTGCAGGAATCCTTAAAATCCCAGCACTGTaGTTACAGTTTGGTTATTCT +
Preference number: 5 (lower is better)
Translates to: RRHTDSNQIHTSTTAGILKIPAL*LQFGYS
Trigger: AGAATAACCAAACTGTAACAACAGTGCTGGGATTTT...AAGGATTCCTGCAGTGGTGGAGGTGTGTATTTGATTGCTGTCAGTGTGCCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379864.6
CDS-3UTR CAA 90 bp ATGCACTTGCATGTTCATCGCAGCACTATTCACAATAGTAAAGATACAGAATCACTGCATAGGAGCCCCTaGAGAGGTGGCTGGATATTA +
Preference number: 5 (lower is better)
Translates to: MHLHVHRSTIHNSKDTESLHRSP*RGGWIL
Trigger: TAATATCCAGCCACCTCTCAAGGGGCTCCTATGCAG...TGATTCTGTATCTTTACTATTGTGAATAGTGCTGCGATGAACATGCAAGTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379864.6
CDS GCA 90 bp CTTTCTCTGAAGGTTGGCGGTGATTCAAAAAGCAATATCTATACATaGTCTGCTCTTCAGGACACCTGTGAATATAGCTGGCAACTTAGT +
Preference number: 5 (lower is better)
Translates to: LSLKVGGDSKSNIYT*SALQDTCEYSWQLS
Trigger: ACTAAGTTGCCAGCTATATTCACAGGTGTCCTGAAGAGCAGAGCATGTATAGATATTGCTTTTTGAATCACCGCCAACCTTCAGAGAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485600.1
CDS-3UTR CAA 90 bp AAAGAAATACATGTGAGATCACAATCCTGGGGGTGGTGCACATGTCTGAGTATTCAGTTGATCCACCTGTaGCCTTTTAGAAACTTGATG +
Preference number: 5 (lower is better)
Translates to: KEIHVRSQSWGWCTCLSIQLIHL*PFRNLM
Trigger: CATCAAGTTTCTAAAAGGCAACAGGTGGATCAACTG...AATACTCAGACATGTGCACCACCCCCAGGATTGTGATCTCACATGTATTTCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000239860.10
ENST00000379864.6
ENST00000491049.6
ENST00000503173.5
ENST00000506800.5
CDS-3UTR CAA 90 bp ATACATGTGAGATCACAATCCTGGGGGTGGTGCACATGTCTGAGTATTTTACTTCAGTTGATCCACCTGTaGCCTTTTAGAAACTTGATG +
Preference number: 5 (lower is better)
Translates to: IHVRSQSWGWCTCLSILLQLIHL*PFRNLM
Trigger: CATCAAGTTTCTAAAAGGCAACAGGTGGATCAACTG...AAGTAAAATACTCAGACATGTGCACCACCCCCAGGATTGTGATCTCACATGTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000239860.10
ENST00000379864.6
ENST00000491049.6
ENST00000503173.5
ENST00000506800.5
CDS-3UTR CAA 90 bp GAAATACATGTGAGATCACAATCCTGGGGGTGGTGCACATGTCTGAGTATTTTAATAGGTAACTCTGCTTaGGAATCTCCTATACATGCT +
Preference number: 5 (lower is better)
Translates to: EIHVRSQSWGWCTCLSILIGNSA*ESPIHA
Trigger: AGCATGTATAGGAGATTCCAAAGCAGAGTTACCTAT...TAAAATACTCAGACATGTGCACCACCCCCAGGATTGTGATCTCACATGTATTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379864.6
CDS-3UTR CAA 90 bp GAAATACATGTGAGATCACAATCCTGGGGGTGGTGCACATGTCTGAGTATTTTAAAAGGAGAGCAAACATaGACAAATAACTTTCGGCTA +
Preference number: 5 (lower is better)
Translates to: EIHVRSQSWGWCTCLSILKGEQT*TNNFRL
Trigger: TAGCCGAAAGTTATTTGTCAATGTTTGCTCTCCTTT...TAAAATACTCAGACATGTGCACCACCCCCAGGATTGTGATCTCACATGTATTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379864.6
CDS-3UTR CAA 90 bp GAAATACATGTGAGATCACAATCCTGGGGGTGGTGCACATGTCTGAGTATTTTAAAACAACTGCAGATATaGACATGCACCTTAAGACTA +
Preference number: 5 (lower is better)
Translates to: EIHVRSQSWGWCTCLSILKQLQI*TCTLRL
Trigger: TAGTCTTAAGGTGCATGTCAATATCTGCAGTTGTTT...TAAAATACTCAGACATGTGCACCACCCCCAGGATTGTGATCTCACATGTATTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379864.6
CDS TCA 90 bp GCAAAAACACAGTATTTGTCTATATCTTTCTCTGAAGGTTGGCGGTaGTTCAAAAAGCAATATCTATACATGCTCTGCTCTTCAGGACAC +
Preference number: 5 (lower is better)
Translates to: AKTQYLSISFSEGWR*FKKQYLYMLCSSGH
Trigger: GTGTCCTGAAGAGCAGAGCATGTATAGATATTGCTTTTTGAATCACCGCCAACCTTCAGAGAAAGATATAGACAAATACTGTGTTTTTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000485600.1
CDS CCA 90 bp AATATCTATACATGCTCTGCTCTTCAGGACACCTGTGAATATAGCTaGCAACTTAGTGCTCCACCTATAGCTACTCAAAAATTATTTGTT +
Preference number: 5 (lower is better)
Translates to: NIYTCSALQDTCEYS*QLSAPPIATQKLFV
Trigger: AACAAATAATTTTTGAGTAGCTATAGGTGGAGCACTAAGTTGCCAGCTATATTCACAGGTGTCCTGAAGAGCAGAGCATGTATAGATATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485600.1
CDS GCA 72 bp TGCACTGCATCCTTCTTGCGGACTTCTTCCAGCAACTaGTGTTTCAGGCGGTTGGTGCTCACACCGTCGAAG +
Preference number: 6 (lower is better)
Translates to: CTASFLRTSSSN*CFRRLVLTPSK
Trigger: CTTCGACGGTGTGAGCACCAACCGCCTGAAACAGCAGTTGCTGGAAGAAGTCCGCAAGAAGGATGCAGTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239859.8
ENST00000477250.1
ENST00000503173.5
CDS GCA 72 bp TCCATTCACTACTTCTTGCGGACTTCTTCCAGCAACTaGTGTTTCAGGCGGTTGGTGCTCACACCGTCGAAG +
Preference number: 6 (lower is better)
Translates to: SIHYFLRTSSSN*CFRRLVLTPSK
Trigger: CTTCGACGGTGTGAGCACCAACCGCCTGAAACAGCAGTTGCTGGAAGAAGTCCGCAAGAAGTAGTGAATGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000239860.10
ENST00000379862.6
ENST00000379864.6
ENST00000471781.5
ENST00000479850.6
ENST00000486683.5
ENST00000491049.6
ENST00000506800.5
ENST00000510088.5
CDS GCA 72 bp GGACTTCTTCCAGCAACTGCTGTTTCAGGCGGTTGGTaGTCACACCGTCGAAGTTGTAGTTTCTCTCTTCCT +
Preference number: 6 (lower is better)
Translates to: GLLPATAVSGGW*SHRRSCSFSLP
Trigger: AGGAAGAGAGAAACTACAACTTCGACGGTGTGAGCACCAACCGCCTGAAACAGCAGTTGCTGGAAGAAGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000239859.8
ENST00000239860.10
ENST00000379862.6
ENST00000379864.6
ENST00000471781.5
ENST00000477250.1
ENST00000479850.6
ENST00000485600.1
ENST00000486683.5
ENST00000491049.6
ENST00000503173.5
ENST00000506800.5
ENST00000510088.5
CDS GCA 72 bp GTTTTCCATTCATTCTTGCGGACTTCTTCCAGCAACTaGTGTTTCAGGCGGTTGGTGCTCACACCGTCGAAG +
Preference number: 6 (lower is better)
Translates to: VFHSFLRTSSSN*CFRRLVLTPSK
Trigger: CTTCGACGGTGTGAGCACCAACCGCCTGAAACAGCAGTTGCTGGAAGAAGTCCGCAAGAATGAATGGAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485600.1
CDS CCA 72 bp TGCGGACTTCTTCCAGCAACTGCTGTTTCAGGCGGTTaGTGCTCACACCGTCGAAGTTGTAGTTTCTCTCTT +
Preference number: 6 (lower is better)
Translates to: CGLLPATAVSGG*CSHRRSCSFSL
Trigger: AAGAGAGAAACTACAACTTCGACGGTGTGAGCACCAACCGCCTGAAACAGCAGTTGCTGGAAGAAGTCCGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000239859.8
ENST00000239860.10
ENST00000379862.6
ENST00000379864.6
ENST00000471781.5
ENST00000477250.1
ENST00000479850.6
ENST00000485600.1
ENST00000486683.5
ENST00000491049.6
ENST00000503173.5
ENST00000506800.5
ENST00000510088.5
CDS CCA 72 bp ACAAATGGATGGCAGAGTAGAAACTTAGGGGAAGCCTaGATTCCTGAAGGCATTATACAGCCACTGCACCAC +
Preference number: 6 (lower is better)
Translates to: TNGWQSRNLGEA*IPEGIIQPLHH
Trigger: GTGGTGCAGTGGCTGTATAATGCCTTCAGGAATCCAGGCTTCCCCTAAGTTTCTACTCTGCCATCCATTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477250.1
CDS CCA 72 bp ACATGCTCTGCTCTTCAGGACACCTGTGAATATAGCTaGCAACTTAGTGCTCCACCTATAGCTACTCAAAAA +
Preference number: 6 (lower is better)
Translates to: TCSALQDTCEYS*QLSAPPIATQK
Trigger: TTTTTGAGTAGCTATAGGTGGAGCACTAAGTTGCCAGCTATATTCACAGGTGTCCTGAAGAGCAGAGCATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485600.1
CDS CAA 72 bp GAGGCAAGTCCTAGTATCAATTTCCCTCAGGTTCTTTaGCTCCAGGGTACCAATGGCTCCTTAGTTATTTTC +
Preference number: 6 (lower is better)
Translates to: EASPSINFPQVL*LQGTNGSLVIF
Trigger: GAAAATAACTAAGGAGCCATTGGTACCCTGGAGCAAAAGAACCTGAGGGAAATTGATACTAGGACTTGCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506800.5
CDS TCA 72 bp GAGACATTTCAGCTAGGTATGTACGGCGTTCATTGTTaGTCTTCTGGTAAGCCTTTGATTCTTGTTCCAGTT +
Preference number: 6 (lower is better)
Translates to: ETFQLGMYGVHC*SSGKPLILVPV
Trigger: AACTGGAACAAGAATCAAAGGCTTACCAGAAGATCAACAATGAACGCCGTACATACCTAGCTGAAATGTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000239859.8
ENST00000239860.10
ENST00000379862.6
ENST00000379864.6
ENST00000479850.6
ENST00000486683.5
ENST00000491049.6
ENST00000503173.5
ENST00000506800.5
ENST00000510088.5
CDS CAA 90 bp CTACCTTCATTGTCAGTATTGAGTTTGGCTTCCAGTTCCGTAATCTaGTGTCTTAGTTCAAATATTGAGAGTTGCACTGCATCCTTCTTG +
Preference number: 6 (lower is better)
Translates to: LPSLSVLSLASSSVI*CLSSNIESCTASFL
Trigger: CAAGAAGGATGCAGTGCAACTCTCAATATTTGAACTAAGACACAAGATTACGGAACTGGAAGCCAAACTCAATACTGACAATGAAGGTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239859.8
ENST00000477250.1
ENST00000503173.5
CDS CAA 72 bp GCTGGAGGAATTAAGTATTTCTTATGTGACCCTAACTaGGAGAAAACTTTCGGAAGCTTGAGCCTAGTTTTC +
Preference number: 6 (lower is better)
Translates to: AGGIKYFLCDPN*EKTFGSLSLVF
Trigger: GAAAACTAGGCTCAAGCTTCCGAAAGTTTTCTCCAAGTTAGGGTCACATAAGAAATACTTAATTCCTCCAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479850.6
CDS CCA 72 bp AGAACAGACTCTCTCATTCCATCACTTCCAATTCACTaGACTGTTCATAACTTAATGTTCTTGATCTTCCCA +
Preference number: 6 (lower is better)
Translates to: RTDSLIPSLPIH*TVHNLMFLIFP
Trigger: TGGGAAGATCAAGAACATTAAGTTATGAACAGTCCAGTGAATTGGAAGTGATGGAATGAGAGAGTCTGTTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479850.6
CDS CAA 72 bp TTGTCAGTATTGAGTTTGGCTTCCAGTTCCGTAATCTaGTGTCTTAGTTCAAATATTGAGAGTTGCACTGCA +
Preference number: 6 (lower is better)
Translates to: LSVLSLASSSVI*CLSSNIESCTA
Trigger: TGCAGTGCAACTCTCAATATTTGAACTAAGACACAAGATTACGGAACTGGAAGCCAAACTCAATACTGACAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239859.8
ENST00000477250.1
ENST00000503173.5
CDS CAA 72 bp GTCCTTCAAACAGATCCCTTGAACAAAACAGTTTATTaGGACCTTGCGCTAGTCTTCAAACTTCTCTTTGAA +
Preference number: 6 (lower is better)
Translates to: VLQTDPLNKTVY*DLALVFKLLFE
Trigger: TTCAAAGAGAAGTTTGAAGACTAGCGCAAGGTCCAAATAAACTGTTTTGTTCAAGGGATCTGTTTGAAGGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485600.1
CDS CAA 90 bp AAGGGTCCAATTCTTCTTTTAAGAGGAGGCTGTTGTTGCAATTTTTaGCTGGAGGAATTAAGTATTTCTTATGTGACCCTAACTTGGAGA +
Preference number: 6 (lower is better)
Translates to: KGPILLLRGGCCCNF*LEELSISYVTLTWR
Trigger: TCTCCAAGTTAGGGTCACATAAGAAATACTTAATTCCTCCAGCAAAAAATTGCAACAACAGCCTCCTCTTAAAAGAAGAATTGGACCCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479850.6
CDS CAA 90 bp TTATTTGTTGTCCTTCAAACAGATCCCTTGAACAAAACAGTTTATTaGGACCTTGCGCTAGTCTTCAAACTTCTCTTTGAAATACGTCTG +
Preference number: 6 (lower is better)
Translates to: LFVVLQTDPLNKTVY*DLALVFKLLFEIRL
Trigger: CAGACGTATTTCAAAGAGAAGTTTGAAGACTAGCGCAAGGTCCAAATAAACTGTTTTGTTCAAGGGATCTGTTTGAAGGACAACAAATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485600.1
CDS CAA 90 bp CCTATAGCTACTCAAAAATTATTTGTTGTCCTTCAAACAGATCCCTaGAACAAAACAGTTTATTTGGACCTTGCGCTAGTCTTCAAACTT +
Preference number: 6 (lower is better)
Translates to: PIATQKLFVVLQTDP*NKTVYLDLALVFKL
Trigger: AAGTTTGAAGACTAGCGCAAGGTCCAAATAAACTGTTTTGTTCAAGGGATCTGTTTGAAGGACAACAAATAATTTTTGAGTAGCTATAGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485600.1
CDS CAA 72 bp CTTCCAATTCACTGGACTGTTCATAACTTAATGTTCTaGATCTTCCCAAGGAGCTGCTTTTATCTGATTATA +
Preference number: 6 (lower is better)
Translates to: LPIHWTVHNLMF*IFPRSCFYLII
Trigger: TATAATCAGATAAAAGCAGCTCCTTGGGAAGATCAAGAACATTAAGTTATGAACAGTCCAGTGAATTGGAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479850.6