RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CBY2 (Homo sapiens)

Ensembl gene IDs: ENSG00000174015

Ensembl transcript IDs: ENST00000310521.6, ENST00000378966.3, ENST00000533564.1, ENST00000610924.1

Found 257 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CAA 90 bp GGCTGGGGAAGGCGAGGACGACAAAGGAAGGCAGGGGATTCTCTTTaGCCCAGTGTTCGGTGTCCCAAACTCGGCGTCCCGGTGCAAGGC +
Preference number: 2 (lower is better)
Translates to: GWGRRGRQRKAGDSL*PSVRCPKLGVPVQG
Trigger: GCCTTGCACCGGGACGCCGAGTTTGGGACACCGAACACTGGGCAAAAGAGAATCCCCTGCCTTCCTTTGTCGTCCTCGCCTTCCCCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
3UTR GCA 72 bp GGCGAGGACGACAAAGGAAGGCAGGGGATTCTCTTTTaGCCAGTGTTCGGTGTCCCAAACTCGGCGTCCCGG +
Preference number: 3 (lower is better)
Translates to: GEDDKGRQGILF*PVFGVPNSASR
Trigger: CCGGGACGCCGAGTTTGGGACACCGAACACTGGGCAAAAGAGAATCCCCTGCCTTCCTTTGTCGTCCTCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR GCA 90 bp CTTTTGCCCAGTGTTCGGTGTCCCAAACTCGGCGTCCCGGTGCAAGGCCGAGGCGCAGCAGCCCGGGGCTaGAGGGCTCCTCGTGGGGTG +
Preference number: 4 (lower is better)
Translates to: LLPSVRCPKLGVPVQGRGAAARG*RAPRGV
Trigger: CACCCCACGAGGAGCCCTGCAGCCCCGGGCTGCTGC...GCCTCGGCCTTGCACCGGGACGCCGAGTTTGGGACACCGAACACTGGGCAAAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR GCA 90 bp CTTTTGCCCAGTGTTCGGTGTCCCAAACTCGGCGTCCCGGTGCAAGGCCGAGGCGGCGGCCGTGTCCTCTaGCTGCGCCCAGTAGGCCTG +
Preference number: 4 (lower is better)
Translates to: LLPSVRCPKLGVPVQGRGGGRVL*LRPVGL
Trigger: CAGGCCTACTGGGCGCAGGCAGAGGACACGGCCGCC...GCCTCGGCCTTGCACCGGGACGCCGAGTTTGGGACACCGAACACTGGGCAAAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR GCA 90 bp GGCAGGGGATTCTCTTTTGCCCAGTGTTCGGTGTCCCAAACTCGGCGTCCCGGTGCTGGCTCGCCATCCTaGGGCTCAGCCGGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: GRGFSFAQCSVSQTRRPGAGSPS*GSAGAG
Trigger: CCCTGCCCCGGCTGAGCCGCAGGATGGCGAGCCAGC...ACCGGGACGCCGAGTTTGGGACACCGAACACTGGGCAAAAGAGAATCCCCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR GCA 90 bp GGCAGGGGATTCTCTTTTGCCCAGTGTTCGGTGTCCCAAACTCGGCGTCCCGGTCCGGAGCCCTGGTCCTaGAGCAGCCCGGGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: GRGFSFAQCSVSQTRRPGPEPWS*SSPGLQ
Trigger: CTGCAGCCCCGGGCTGCTGCAGGACCAGGGCTCCGG...ACCGGGACGCCGAGTTTGGGACACCGAACACTGGGCAAAAGAGAATCCCCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CCA 90 bp CTCTTTTGCCCAGTGTTCGGTGTCCCAAACTCGGCGTCCCGGTGCAAGGCCGAGGGGCCGGAGGCCCTTTaGGCTCCTCGAAGCGGGAGG +
Preference number: 4 (lower is better)
Translates to: LFCPVFGVPNSASRCKAEGPEAL*APRSGR
Trigger: CCTCCCGCTTCGAGGAGCCCAAAGGGCCTCCGGCCC...CTCGGCCTTGCACCGGGACGCCGAGTTTGGGACACCGAACACTGGGCAAAAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CCA 90 bp GGCAGGGGATTCTCTTTTGCCCAGTGTTCGGTGTCCCAAACTCGGCGTCCCGGTAGCAGCTGCAGGGGCTaGCAGCCGTCGGGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: GRGFSFAQCSVSQTRRPGSSCRG*QPSGRP
Trigger: GGGCCTGCCCGACGGCTGCCAGCCCCTGCAGCTGCT...ACCGGGACGCCGAGTTTGGGACACCGAACACTGGGCAAAAGAGAATCCCCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR GCA 90 bp CTTTTGCCCAGTGTTCGGTGTCCCAAACTCGGCGTCCCGGTGCAAGGCCGAGGCGGAGGAGCTGCAGGGTaGTGTCCTCCTTGCCACGGG +
Preference number: 4 (lower is better)
Translates to: LLPSVRCPKLGVPVQGRGGGAAG*CPPCHG
Trigger: CCCGTGGCAAGGAGGACAGCACCCTGCAGCTCCTCC...GCCTCGGCCTTGCACCGGGACGCCGAGTTTGGGACACCGAACACTGGGCAAAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CCA 90 bp GGTACGAACTGGCTGGGGAAGGCGAGGACGACAAAGGAAGGCAGGGGATTCTCTGGGCGCGCAGCTCCTTaGAGTCCTCCTGCCGGGCCG +
Preference number: 4 (lower is better)
Translates to: GTNWLGKARTTKEGRGFSGRAAP*SPPAGP
Trigger: CGGCCCGGCAGGAGGACTCCAAGGAGCTGCGCGCCC...AGAGAATCCCCTGCCTTCCTTTGTCGTCCTCGCCTTCCCCAGCCAGTTCGTACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR TCA 90 bp GCAGGGGATTCTCTTTTGCCCAGTGTTCGGTGTCCCAAACTCGGCGTCCCGGTGCGAACATCTCGTCGCTaGGCTGCACCCGCGGCGGGT +
Preference number: 4 (lower is better)
Translates to: AGDSLLPSVRCPKLGVPVRTSRR*AAPAAG
Trigger: ACCCGCCGCGGGTGCAGCTCAGCGACGAGATGTTCG...CACCGGGACGCCGAGTTTGGGACACCGAACACTGGGCAAAAGAGAATCCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR TCA 90 bp GGCAGGGGATTCTCTTTTGCCCAGTGTTCGGTGTCCCAAACTCGGCGTCCCGGTGGAGCCGGTTCTCCTTaGGCAGGGCCTGCAGCGCCT +
Preference number: 4 (lower is better)
Translates to: GRGFSFAQCSVSQTRRPGGAGSP*AGPAAP
Trigger: AGGCGCTGCAGGCCCTGCTCAAGGAGAACCGGCTCC...ACCGGGACGCCGAGTTTGGGACACCGAACACTGGGCAAAAGAGAATCCCCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR GCA 90 bp GCAGGGGATTCTCTTTTGCCCAGTGTTCGGTGTCCCAAACTCGGCGTCCCGGTGGGGTGCTGTCCTCCTTaGCACGGGGCACCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: AGDSLLPSVRCPKLGVPVGCCPP*HGAPAG
Trigger: CCCTGCAGGTGCCCCGTGGCAAGGAGGACAGCACCC...CACCGGGACGCCGAGTTTGGGACACCGAACACTGGGCAAAAGAGAATCCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR GCA 90 bp GTACGAACTGGCTGGGGAAGGCGAGGACGACAAAGGAAGGCAGGGGATTCTCTTGCAGCAGCCCGGGGCTaGAGGGCTCCTCGTGGGGTG +
Preference number: 4 (lower is better)
Translates to: VRTGWGRRGRQRKAGDSLAAARG*RAPRGV
Trigger: CACCCCACGAGGAGCCCTGCAGCCCCGGGCTGCTGC...AAGAGAATCCCCTGCCTTCCTTTGTCGTCCTCGCCTTCCCCAGCCAGTTCGTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR GCA 90 bp CTTTTGCCCAGTGTTCGGTGTCCCAAACTCGGCGTCCCGGTGCAAGGCCGAGGCATCTCTCTCAGCAGCTaGAGGGGCTGGCAGCCGTCG +
Preference number: 4 (lower is better)
Translates to: LLPSVRCPKLGVPVQGRGISLSS*RGWQPS
Trigger: CGACGGCTGCCAGCCCCTGCAGCTGCTGAGAGAGAT...GCCTCGGCCTTGCACCGGGACGCCGAGTTTGGGACACCGAACACTGGGCAAAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CCA 90 bp CTCTTTTGCCCAGTGTTCGGTGTCCCAAACTCGGCGTCCCGGTGCAAGGCCGAGGGTCGGCCTGGGACATaGGGCGCTCCATGGGGTCTA +
Preference number: 4 (lower is better)
Translates to: LFCPVFGVPNSASRCKAEGRPGT*GAPWGL
Trigger: TAGACCCCATGGAGCGCCCCATGTCCCAGGCCGACC...CTCGGCCTTGCACCGGGACGCCGAGTTTGGGACACCGAACACTGGGCAAAAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CCA 90 bp GATTCTCTTTTGCCCAGTGTTCGGTGTCCCAAACTCGGCGTCCCGGTGCAAGGCGGGCCGGAGGCCCTTTaGGCTCCTCGAAGCGGGAGG +
Preference number: 4 (lower is better)
Translates to: DSLLPSVRCPKLGVPVQGGPEAL*APRSGR
Trigger: CCTCCCGCTTCGAGGAGCCCAAAGGGCCTCCGGCCC...GCCTTGCACCGGGACGCCGAGTTTGGGACACCGAACACTGGGCAAAAGAGAATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR TCA 90 bp GGCAGGGGATTCTCTTTTGCCCAGTGTTCGGTGTCCCAAACTCGGCGTCCCGGTGGCTCCTGGCCGGCATaGAGGCGTAGAGCTCCTCGA +
Preference number: 4 (lower is better)
Translates to: GRGFSFAQCSVSQTRRPGGSWPA*RRRAPR
Trigger: TCGAGGAGCTCTACGCCTTCATGCCGGCCAGGAGCC...ACCGGGACGCCGAGTTTGGGACACCGAACACTGGGCAAAAGAGAATCCCCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR GCA 90 bp GGCAGGGGATTCTCTTTTGCCCAGTGTTCGGTGTCCCAAACTCGGCGTCCCGGTTTGCCACGGGGCACCTaGAGGGCGACGTGGTCCTTC +
Preference number: 4 (lower is better)
Translates to: GRGFSFAQCSVSQTRRPGLPRGT*RATWSF
Trigger: GAAGGACCACGTCGCCCTGCAGGTGCCCCGTGGCAA...ACCGGGACGCCGAGTTTGGGACACCGAACACTGGGCAAAAGAGAATCCCCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR GCA 90 bp GGATTCTCTTTTGCCCAGTGTTCGGTGTCCCAAACTCGGCGTCCCGGTGCAAGGGGGTGCTGTCCTCCTTaGCACGGGGCACCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: GFSFAQCSVSQTRRPGARGCCPP*HGAPAG
Trigger: CCCTGCAGGTGCCCCGTGGCAAGGAGGACAGCACCC...CCTTGCACCGGGACGCCGAGTTTGGGACACCGAACACTGGGCAAAAGAGAATCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR GCA 90 bp CTTTTGCCCAGTGTTCGGTGTCCCAAACTCGGCGTCCCGGTGCAAGGCCGAGGCTTCTGCTCCAGCAGCTaGTGCAGCGCGCGATTCTCC +
Preference number: 4 (lower is better)
Translates to: LLPSVRCPKLGVPVQGRGFCSSS*CSARFS
Trigger: GGAGAATCGCGCGCTGCAGCAGCTGCTGGAGCAGAA...GCCTCGGCCTTGCACCGGGACGCCGAGTTTGGGACACCGAACACTGGGCAAAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR GCA 90 bp GGAAGGCGAGGACGACAAAGGAAGGCAGGGGATTCTCTTTTGCCCAGTGTTCGGGTGAGGGGGCGGGCTTaGTTTCCTCGGCAGGGGCGG +
Preference number: 4 (lower is better)
Translates to: GRRGRQRKAGDSLLPSVRVRGRA*FPRQGR
Trigger: CCGCCCCTGCCGAGGAAAGCAAGCCCGCCCCCTCAC...CCGAACACTGGGCAAAAGAGAATCCCCTGCCTTCCTTTGTCGTCCTCGCCTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR GCA 90 bp AATAGGTACGAACTGGCTGGGGAAGGCGAGGACGACAAAGGAAGGCAGGGGATTGCAGCAGCCCGGGGCTaGAGGGCTCCTCGTGGGGTG +
Preference number: 4 (lower is better)
Translates to: NRYELAGEGEDDKGRQGIAAARG*RAPRGV
Trigger: CACCCCACGAGGAGCCCTGCAGCCCCGGGCTGCTGC...AATCCCCTGCCTTCCTTTGTCGTCCTCGCCTTCCCCAGCCAGTTCGTACCTATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR GCA 90 bp AAAGGAAGGCAGGGGATTCTCTTTTGCCCAGTGTTCGGTGTCCCAAACTCGGCGCCGGAGCCCTGGTCCTaGAGCAGCCCGGGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: KGRQGILFCPVFGVPNSAPEPWS*SSPGLQ
Trigger: CTGCAGCCCCGGGCTGCTGCAGGACCAGGGCTCCGG...CGCCGAGTTTGGGACACCGAACACTGGGCAAAAGAGAATCCCCTGCCTTCCTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR GCA 90 bp GCAGGGGATTCTCTTTTGCCCAGTGTTCGGTGTCCCAAACTCGGCGTCCCGGTGTCCTTGGAGTCCTCCTaGCGGGCCGGAGGCCCTTTG +
Preference number: 4 (lower is better)
Translates to: AGDSLLPSVRCPKLGVPVSLESS*RAGGPL
Trigger: CAAAGGGCCTCCGGCCCGGCAGGAGGACTCCAAGGA...CACCGGGACGCCGAGTTTGGGACACCGAACACTGGGCAAAAGAGAATCCCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR GCA 90 bp CTCTTTTGCCCAGTGTTCGGTGTCCCAAACTCGGCGTCCCGGTGCAAGGCCGAGATCTCTCTCAGCAGCTaGAGGGGCTGGCAGCCGTCG +
Preference number: 4 (lower is better)
Translates to: LFCPVFGVPNSASRCKAEISLSS*RGWQPS
Trigger: CGACGGCTGCCAGCCCCTGCAGCTGCTGAGAGAGAT...CTCGGCCTTGCACCGGGACGCCGAGTTTGGGACACCGAACACTGGGCAAAAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CCA 90 bp GGCAGGGGATTCTCTTTTGCCCAGTGTTCGGTGTCCCAAACTCGGCGTCCCGGTGTCTTTGTGCAGCAGTaGCGAGGGGGCCCGGCTCTC +
Preference number: 4 (lower is better)
Translates to: GRGFSFAQCSVSQTRRPGVFVQQ*RGGPAL
Trigger: GAGAGCCGGGCCCCCTCGCCACTGCTGCACAAAGAC...ACCGGGACGCCGAGTTTGGGACACCGAACACTGGGCAAAAGAGAATCCCCTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CCA 90 bp GGAAGGCTGCTAACGCTGCTTTTCAATAGGTACGAACTGGCTGGGGAAGGCGAGAGCAGCTGCAGGGGCTaGCAGCCGTCGGGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: GRLLTLLFNRYELAGEGESSCRG*QPSGRP
Trigger: GGGCCTGCCCGACGGCTGCCAGCCCCTGCAGCTGCT...CTCGCCTTCCCCAGCCAGTTCGTACCTATTGAAAAGCAGCGTTAGCAGCCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CCA 90 bp CTCTTTTGCCCAGTGTTCGGTGTCCCAAACTCGGCGTCCCGGTGCAAGGCCGAGGGCTTCTTGGGGTCCTaGCTCCTGGCCGGCATGAAG +
Preference number: 4 (lower is better)
Translates to: LFCPVFGVPNSASRCKAEGFLGS*LLAGMK
Trigger: CTTCATGCCGGCCAGGAGCCAGGACCCCAAGAAGCC...CTCGGCCTTGCACCGGGACGCCGAGTTTGGGACACCGAACACTGGGCAAAAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR TCA 90 bp GGAAGGCGAGGACGACAAAGGAAGGCAGGGGATTCTCTTTTGCCCAGTGTTCGGCGAACATCTCGTCGCTaGGCTGCACCCGCGGCGGGT +
Preference number: 4 (lower is better)
Translates to: GRRGRQRKAGDSLLPSVRRTSRR*AAPAAG
Trigger: ACCCGCCGCGGGTGCAGCTCAGCGACGAGATGTTCG...CCGAACACTGGGCAAAAGAGAATCCCCTGCCTTCCTTTGTCGTCCTCGCCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR TCA 90 bp AGGTACGAACTGGCTGGGGAAGGCGAGGACGACAAAGGAAGGCAGGGGATTCTCGCCCGGACATGTTGCTaGCCATCTTCCGCAGGGCGC +
Preference number: 4 (lower is better)
Translates to: RYELAGEGEDDKGRQGILARTCC*PSSAGR
Trigger: GCGCCCTGCGGAAGATGGTCAGCAACATGTCCGGGC...GAGAATCCCCTGCCTTCCTTTGTCGTCCTCGCCTTCCCCAGCCAGTTCGTACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR GCA 90 bp AGGTACGAACTGGCTGGGGAAGGCGAGGACGACAAAGGAAGGCAGGGGATTCTCGACGCGCTGTCTTTGTaGAGCAGTGGCGAGGGGGCC +
Preference number: 4 (lower is better)
Translates to: RYELAGEGEDDKGRQGILDALSL*SSGEGA
Trigger: GGCCCCCTCGCCACTGCTGCACAAAGACAGCGCGTC...GAGAATCCCCTGCCTTCCTTTGTCGTCCTCGCCTTCCCCAGCCAGTTCGTACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR GCA 90 bp CTCTTTTGCCCAGTGTTCGGTGTCCCAAACTCGGCGTCCCGGTGCAAGGCCGAGTTCTGCTCCAGCAGCTaGTGCAGCGCGCGATTCTCC +
Preference number: 4 (lower is better)
Translates to: LFCPVFGVPNSASRCKAEFCSSS*CSARFS
Trigger: GGAGAATCGCGCGCTGCAGCAGCTGCTGGAGCAGAA...CTCGGCCTTGCACCGGGACGCCGAGTTTGGGACACCGAACACTGGGCAAAAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR GCA 90 bp AGGTACGAACTGGCTGGGGAAGGCGAGGACGACAAAGGAAGGCAGGGGATTCTCTCCTTGGAGTCCTCCTaGCGGGCCGGAGGCCCTTTG +
Preference number: 4 (lower is better)
Translates to: RYELAGEGEDDKGRQGILSLESS*RAGGPL
Trigger: CAAAGGGCCTCCGGCCCGGCAGGAGGACTCCAAGGA...GAGAATCCCCTGCCTTCCTTTGTCGTCCTCGCCTTCCCCAGCCAGTTCGTACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR GCA 90 bp GAAGGCAGGGGATTCTCTTTTGCCCAGTGTTCGGTGTCCCAAACTCGGCGTCCCTCCTTGGAGTCCTCCTaGCGGGCCGGAGGCCCTTTG +
Preference number: 4 (lower is better)
Translates to: EGRGFSFAQCSVSQTRRPSLESS*RAGGPL
Trigger: CAAAGGGCCTCCGGCCCGGCAGGAGGACTCCAAGGA...GGGACGCCGAGTTTGGGACACCGAACACTGGGCAAAAGAGAATCCCCTGCCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CCA 90 bp AGGTACGAACTGGCTGGGGAAGGCGAGGACGACAAAGGAAGGCAGGGGATTCTCGGTCGGCCTGGGACATaGGGCGCTCCATGGGGTCTA +
Preference number: 4 (lower is better)
Translates to: RYELAGEGEDDKGRQGILGRPGT*GAPWGL
Trigger: TAGACCCCATGGAGCGCCCCATGTCCCAGGCCGACC...GAGAATCCCCTGCCTTCCTTTGTCGTCCTCGCCTTCCCCAGCCAGTTCGTACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CCA 90 bp CTTTTGCCCAGTGTTCGGTGTCCCAAACTCGGCGTCCCGGTGCAAGGCCGAGGCTTGTGGTGCAGCTTGTaGTGGAAGGAGGCGGATGGG +
Preference number: 4 (lower is better)
Translates to: LLPSVRCPKLGVPVQGRGLWCSL*WKEADG
Trigger: CCCATCCGCCTCCTTCCACCACAAGCTGCACCACAA...GCCTCGGCCTTGCACCGGGACGCCGAGTTTGGGACACCGAACACTGGGCAAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CCA 90 bp GGATTCTCTTTTGCCCAGTGTTCGGTGTCCCAAACTCGGCGTCCCGGTGCAAGGGTCTTTGTGCAGCAGTaGCGAGGGGGCCCGGCTCTC +
Preference number: 4 (lower is better)
Translates to: GFSFAQCSVSQTRRPGARVFVQQ*RGGPAL
Trigger: GAGAGCCGGGCCCCCTCGCCACTGCTGCACAAAGAC...CCTTGCACCGGGACGCCGAGTTTGGGACACCGAACACTGGGCAAAAGAGAATCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CCA 90 bp AAGGAAGGCAGGGGATTCTCTTTTGCCCAGTGTTCGGTGTCCCAAACTCGGCGTGGGCCGGAGGCCCTTTaGGCTCCTCGAAGCGGGAGG +
Preference number: 4 (lower is better)
Translates to: KEGRGFSFAQCSVSQTRRGPEAL*APRSGR
Trigger: CCTCCCGCTTCGAGGAGCCCAAAGGGCCTCCGGCCC...ACGCCGAGTTTGGGACACCGAACACTGGGCAAAAGAGAATCCCCTGCCTTCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CCA 90 bp TTTTCAATAGGTACGAACTGGCTGGGGAAGGCGAGGACGACAAAGGAAGGCAGGGGGCGCGCAGCTCCTTaGAGTCCTCCTGCCGGGCCG +
Preference number: 4 (lower is better)
Translates to: FSIGTNWLGKARTTKEGRGRAAP*SPPAGP
Trigger: CGGCCCGGCAGGAGGACTCCAAGGAGCTGCGCGCCC...CCTGCCTTCCTTTGTCGTCCTCGCCTTCCCCAGCCAGTTCGTACCTATTGAAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR TCA 90 bp GGAAGGCTGCTAACGCTGCTTTTCAATAGGTACGAACTGGCTGGGGAAGGCGAGGGAGCCGGTTCTCCTTaGGCAGGGCCTGCAGCGCCT +
Preference number: 4 (lower is better)
Translates to: GRLLTLLFNRYELAGEGEGAGSP*AGPAAP
Trigger: AGGCGCTGCAGGCCCTGCTCAAGGAGAACCGGCTCC...CTCGCCTTCCCCAGCCAGTTCGTACCTATTGAAAAGCAGCGTTAGCAGCCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR TCA 90 bp AGGCGAGGACGACAAAGGAAGGCAGGGGATTCTCTTTTGCCCAGTGTTCGGTGTGGAGCCGGTTCTCCTTaGGCAGGGCCTGCAGCGCCT +
Preference number: 4 (lower is better)
Translates to: RRGRQRKAGDSLLPSVRCGAGSP*AGPAAP
Trigger: AGGCGCTGCAGGCCCTGCTCAAGGAGAACCGGCTCC...ACACCGAACACTGGGCAAAAGAGAATCCCCTGCCTTCCTTTGTCGTCCTCGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR GCA 90 bp GGTACGAACTGGCTGGGGAAGGCGAGGACGACAAAGGAAGGCAGGGGATTCTCTGCGCGCAGCGAGGGGTaGTGTACAAGTTGTGGAGCC +
Preference number: 4 (lower is better)
Translates to: GTNWLGKARTTKEGRGFSARSEG*CTSCGA
Trigger: GGCTCCACAACTTGTACAGCACCCCTCGCTGCGCGC...AGAGAATCCCCTGCCTTCCTTTGTCGTCCTCGCCTTCCCCAGCCAGTTCGTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR GCA 90 bp GGCAGGGGATTCTCTTTTGCCCAGTGTTCGGTGTCCCAAACTCGGCGTCCCGGTCCCAGCGAGGCCTTGTaGTCCTCCCAGAAGACCTGT +
Preference number: 4 (lower is better)
Translates to: GRGFSFAQCSVSQTRRPGPSEAL*SSQKTC
Trigger: ACAGGTCTTCTGGGAGGAGCACAAGGCCTCGCTGGG...ACCGGGACGCCGAGTTTGGGACACCGAACACTGGGCAAAAGAGAATCCCCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR GCA 90 bp GAAGGCAGGGGATTCTCTTTTGCCCAGTGTTCGGTGTCCCAAACTCGGCGTCCCTGCTCCAGCAGCTGCTaGAGCGCGCGATTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: EGRGFSFAQCSVSQTRRPCSSSC*SARFSS
Trigger: GGAGGAGAATCGCGCGCTGCAGCAGCTGCTGGAGCA...GGGACGCCGAGTTTGGGACACCGAACACTGGGCAAAAGAGAATCCCCTGCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR GCA 90 bp TTTTCAATAGGTACGAACTGGCTGGGGAAGGCGAGGACGACAAAGGAAGGCAGGGGCGGCCGTGTCCTCTaGCTGCGCCCAGTAGGCCTG +
Preference number: 4 (lower is better)
Translates to: FSIGTNWLGKARTTKEGRGGRVL*LRPVGL
Trigger: CAGGCCTACTGGGCGCAGGCAGAGGACACGGCCGCC...CCTGCCTTCCTTTGTCGTCCTCGCCTTCCCCAGCCAGTTCGTACCTATTGAAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR GCA 90 bp TTTTCAATAGGTACGAACTGGCTGGGGAAGGCGAGGACGACAAAGGAAGGCAGGGTGAGGGGGCGGGCTTaGTTTCCTCGGCAGGGGCGG +
Preference number: 4 (lower is better)
Translates to: FSIGTNWLGKARTTKEGRVRGRA*FPRQGR
Trigger: CCGCCCCTGCCGAGGAAAGCAAGCCCGCCCCCTCAC...CCTGCCTTCCTTTGTCGTCCTCGCCTTCCCCAGCCAGTTCGTACCTATTGAAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CCA 90 bp TCAATAGGTACGAACTGGCTGGGGAAGGCGAGGACGACAAAGGAAGGCAGGGGAAGCTCCAGGTCGGCCTaGGACATGGGGCGCTCCATG +
Preference number: 4 (lower is better)
Translates to: SIGTNWLGKARTTKEGRGSSRSA*DMGRSM
Trigger: CATGGAGCGCCCCATGTCCCAGGCCGACCTGGAGCT...TCCCCTGCCTTCCTTTGTCGTCCTCGCCTTCCCCAGCCAGTTCGTACCTATTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CCA 90 bp GGATTCTCTTTTGCCCAGTGTTCGGTGTCCCAAACTCGGCGTCCCGGTGCAAGGGGCTTCTTGGGGTCCTaGCTCCTGGCCGGCATGAAG +
Preference number: 4 (lower is better)
Translates to: GFSFAQCSVSQTRRPGARGFLGS*LLAGMK
Trigger: CTTCATGCCGGCCAGGAGCCAGGACCCCAAGAAGCC...CCTTGCACCGGGACGCCGAGTTTGGGACACCGAACACTGGGCAAAAGAGAATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR TCA 90 bp AAAGGAAGGCAGGGGATTCTCTTTTGCCCAGTGTTCGGTGTCCCAAACTCGGCGGCCCGGACATGTTGCTaGCCATCTTCCGCAGGGCGC +
Preference number: 4 (lower is better)
Translates to: KGRQGILFCPVFGVPNSAARTCC*PSSAGR
Trigger: GCGCCCTGCGGAAGATGGTCAGCAACATGTCCGGGC...CGCCGAGTTTGGGACACCGAACACTGGGCAAAAGAGAATCCCCTGCCTTCCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR TCA 90 bp ACGAACTGGCTGGGGAAGGCGAGGACGACAAAGGAAGGCAGGGGATTCTCTTTTGCCCGGACATGTTGCTaGCCATCTTCCGCAGGGCGC +
Preference number: 4 (lower is better)
Translates to: TNWLGKARTTKEGRGFSFARTCC*PSSAGR
Trigger: GCGCCCTGCGGAAGATGGTCAGCAACATGTCCGGGC...AAAAGAGAATCCCCTGCCTTCCTTTGTCGTCCTCGCCTTCCCCAGCCAGTTCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR TCA 90 bp GGCAGGGGATTCTCTTTTGCCCAGTGTTCGGTGTCCCAAACTCGGCGTCCCGGTCGGTCACGGTGTCAATaGCCAGCTTCTGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: GRGFSFAQCSVSQTRRPGRSRCQ*PASAAA
Trigger: AGCTGCAGCAGAAGCTGGTCATTGACACCGTGACCG...ACCGGGACGCCGAGTTTGGGACACCGAACACTGGGCAAAAGAGAATCCCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR TCA 90 bp GGATTCTCTTTTGCCCAGTGTTCGGTGTCCCAAACTCGGCGTCCCGGTGCAAGGTTTCCATGCGCGCGGTaGCCTCGGTCACGGTGTCAA +
Preference number: 4 (lower is better)
Translates to: GFSFAQCSVSQTRRPGARFPCAR*PRSRCQ
Trigger: TTGACACCGTGACCGAGGTCACCGCGCGCATGGAAA...CCTTGCACCGGGACGCCGAGTTTGGGACACCGAACACTGGGCAAAAGAGAATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR TCA 90 bp GGTACGAACTGGCTGGGGAAGGCGAGGACGACAAAGGAAGGCAGGGGATTCTCTCGTAGAGCTCCTCGATaGGCATTTCCATGCGCGCGG +
Preference number: 4 (lower is better)
Translates to: GTNWLGKARTTKEGRGFSRRAPR*AFPCAR
Trigger: CCGCGCGCATGGAAATGCTCATCGAGGAGCTCTACG...AGAGAATCCCCTGCCTTCCTTTGTCGTCCTCGCCTTCCCCAGCCAGTTCGTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR TCA 90 bp AATAGGTACGAACTGGCTGGGGAAGGCGAGGACGACAAAGGAAGGCAGGGGATTGGCTCCTGGCCGGCATaGAGGCGTAGAGCTCCTCGA +
Preference number: 4 (lower is better)
Translates to: NRYELAGEGEDDKGRQGIGSWPA*RRRAPR
Trigger: TCGAGGAGCTCTACGCCTTCATGCCGGCCAGGAGCC...AATCCCCTGCCTTCCTTTGTCGTCCTCGCCTTCCCCAGCCAGTTCGTACCTATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR GCA 90 bp GGAAGGCGAGGACGACAAAGGAAGGCAGGGGATTCTCTTTTGCCCAGTGTTCGGGCGCGCAGCGAGGGGTaGTGTACAAGTTGTGGAGCC +
Preference number: 4 (lower is better)
Translates to: GRRGRQRKAGDSLLPSVRARSEG*CTSCGA
Trigger: GGCTCCACAACTTGTACAGCACCCCTCGCTGCGCGC...CCGAACACTGGGCAAAAGAGAATCCCCTGCCTTCCTTTGTCGTCCTCGCCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR GCA 90 bp AAGGAAGGCAGGGGATTCTCTTTTGCCCAGTGTTCGGTGTCCCAAACTCGGCGTGACGCGCTGTCTTTGTaGAGCAGTGGCGAGGGGGCC +
Preference number: 4 (lower is better)
Translates to: KEGRGFSFAQCSVSQTRRDALSL*SSGEGA
Trigger: GGCCCCCTCGCCACTGCTGCACAAAGACAGCGCGTC...ACGCCGAGTTTGGGACACCGAACACTGGGCAAAAGAGAATCCCCTGCCTTCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR GCA 90 bp AGGCGAGGACGACAAAGGAAGGCAGGGGATTCTCTTTTGCCCAGTGTTCGGTGTTTGCCACGGGGCACCTaGAGGGCGACGTGGTCCTTC +
Preference number: 4 (lower is better)
Translates to: RRGRQRKAGDSLLPSVRCLPRGT*RATWSF
Trigger: GAAGGACCACGTCGCCCTGCAGGTGCCCCGTGGCAA...ACACCGAACACTGGGCAAAAGAGAATCCCCTGCCTTCCTTTGTCGTCCTCGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR GCA 90 bp CTTTTCAATAGGTACGAACTGGCTGGGGAAGGCGAGGACGACAAAGGAAGGCAGGGGTGCTGTCCTCCTTaGCACGGGGCACCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: LFNRYELAGEGEDDKGRQGCCPP*HGAPAG
Trigger: CCCTGCAGGTGCCCCGTGGCAAGGAGGACAGCACCC...CTGCCTTCCTTTGTCGTCCTCGCCTTCCCCAGCCAGTTCGTACCTATTGAAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR GCA 90 bp ACGAACTGGCTGGGGAAGGCGAGGACGACAAAGGAAGGCAGGGGATTCTCTTTTGGAGGAGCTGCAGGGTaGTGTCCTCCTTGCCACGGG +
Preference number: 4 (lower is better)
Translates to: TNWLGKARTTKEGRGFSFGGAAG*CPPCHG
Trigger: CCCGTGGCAAGGAGGACAGCACCCTGCAGCTCCTCC...AAAAGAGAATCCCCTGCCTTCCTTTGTCGTCCTCGCCTTCCCCAGCCAGTTCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR GCA 90 bp TCAATAGGTACGAACTGGCTGGGGAAGGCGAGGACGACAAAGGAAGGCAGGGGATGCTCCAGCAGCTGCTaGAGCGCGCGATTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: SIGTNWLGKARTTKEGRGCSSSC*SARFSS
Trigger: GGAGGAGAATCGCGCGCTGCAGCAGCTGCTGGAGCA...TCCCCTGCCTTCCTTTGTCGTCCTCGCCTTCCCCAGCCAGTTCGTACCTATTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR GCA 90 bp CTAACGCTGCTTTTCAATAGGTACGAACTGGCTGGGGAAGGCGAGGACGACAAAGGCGGCCGTGTCCTCTaGCTGCGCCCAGTAGGCCTG +
Preference number: 4 (lower is better)
Translates to: LTLLFNRYELAGEGEDDKGGRVL*LRPVGL
Trigger: CAGGCCTACTGGGCGCAGGCAGAGGACACGGCCGCC...TTTGTCGTCCTCGCCTTCCCCAGCCAGTTCGTACCTATTGAAAAGCAGCGTTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR GCA 90 bp CTAACGCTGCTTTTCAATAGGTACGAACTGGCTGGGGAAGGCGAGGACGACAAAGTGAGGGGGCGGGCTTaGTTTCCTCGGCAGGGGCGG +
Preference number: 4 (lower is better)
Translates to: LTLLFNRYELAGEGEDDKVRGRA*FPRQGR
Trigger: CCGCCCCTGCCGAGGAAAGCAAGCCCGCCCCCTCAC...TTTGTCGTCCTCGCCTTCCCCAGCCAGTTCGTACCTATTGAAAAGCAGCGTTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR GCA 90 bp AGGTACGAACTGGCTGGGGAAGGCGAGGACGACAAAGGAAGGCAGGGGATTCTCTCCTTGAGCAGGGCCTaGAGCGCCTGCCTCATCTCT +
Preference number: 4 (lower is better)
Translates to: RYELAGEGEDDKGRQGILSLSRA*SACLIS
Trigger: AGAGATGAGGCAGGCGCTGCAGGCCCTGCTCAAGGA...GAGAATCCCCTGCCTTCCTTTGTCGTCCTCGCCTTCCCCAGCCAGTTCGTACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR GCA 90 bp GGTACGAACTGGCTGGGGAAGGCGAGGACGACAAAGGAAGGCAGGGGATTCTCTTCCTTGAGCAGGGCCTaGAGCGCCTGCCTCATCTCT +
Preference number: 4 (lower is better)
Translates to: GTNWLGKARTTKEGRGFSSLSRA*SACLIS
Trigger: AGAGATGAGGCAGGCGCTGCAGGCCCTGCTCAAGGA...AGAGAATCCCCTGCCTTCCTTTGTCGTCCTCGCCTTCCCCAGCCAGTTCGTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR GCA 90 bp GGAAGGCGAGGACGACAAAGGAAGGCAGGGGATTCTCTTTTGCCCAGTGTTCGGTCCTGGAAGCCCCTGTaGTCTGCCCGTAGCACCTGC +
Preference number: 4 (lower is better)
Translates to: GRRGRQRKAGDSLLPSVRSWKPL*SARSTC
Trigger: GCAGGTGCTACGGGCAGAGCACAGGGGCTTCCAGGA...CCGAACACTGGGCAAAAGAGAATCCCCTGCCTTCCTTTGTCGTCCTCGCCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR GCA 90 bp GGAAGGCTGCTAACGCTGCTTTTCAATAGGTACGAACTGGCTGGGGAAGGCGAGAACTCGGCGTCCCGGTaGAAGGCCGAGGCCTCAGAC +
Preference number: 4 (lower is better)
Translates to: GRLLTLLFNRYELAGEGENSASR*KAEASD
Trigger: GTCTGAGGCCTCGGCCTTGCACCGGGACGCCGAGTT...CTCGCCTTCCCCAGCCAGTTCGTACCTATTGAAAAGCAGCGTTAGCAGCCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CCA 90 bp CTCTTTTGCCCAGTGTTCGGTGTCCCAAACTCGGCGTCCCGGTGCAAGGCCGAGGTGCTGTACAAGTTGTaGAGCCTCGGGAAGGGTTCG +
Preference number: 4 (lower is better)
Translates to: LFCPVFGVPNSASRCKAEVLYKL*SLGKGS
Trigger: CGAACCCTTCCCGAGGCTCCACAACTTGTACAGCAC...CTCGGCCTTGCACCGGGACGCCGAGTTTGGGACACCGAACACTGGGCAAAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CCA 90 bp GAAGGCAGGGGATTCTCTTTTGCCCAGTGTTCGGTGTCCCAAACTCGGCGTCCCACATGGGGCGCTCCATaGGGTCTAAAGGCACGGAGG +
Preference number: 4 (lower is better)
Translates to: EGRGFSFAQCSVSQTRRPTWGAP*GLKARR
Trigger: CCTCCGTGCCTTTAGACCCCATGGAGCGCCCCATGT...GGGACGCCGAGTTTGGGACACCGAACACTGGGCAAAAGAGAATCCCCTGCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CCA 90 bp ACGAACTGGCTGGGGAAGGCGAGGACGACAAAGGAAGGCAGGGGATTCTCTTTTGGTCGGCCTGGGACATaGGGCGCTCCATGGGGTCTA +
Preference number: 4 (lower is better)
Translates to: TNWLGKARTTKEGRGFSFGRPGT*GAPWGL
Trigger: TAGACCCCATGGAGCGCCCCATGTCCCAGGCCGACC...AAAAGAGAATCCCCTGCCTTCCTTTGTCGTCCTCGCCTTCCCCAGCCAGTTCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CCA 90 bp ACGAACTGGCTGGGGAAGGCGAGGACGACAAAGGAAGGCAGGGGATTCTCTTTTAGCTCCAGGTCGGCCTaGGACATGGGGCGCTCCATG +
Preference number: 4 (lower is better)
Translates to: TNWLGKARTTKEGRGFSFSSRSA*DMGRSM
Trigger: CATGGAGCGCCCCATGTCCCAGGCCGACCTGGAGCT...AAAAGAGAATCCCCTGCCTTCCTTTGTCGTCCTCGCCTTCCCCAGCCAGTTCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CCA 90 bp GCAGGGGATTCTCTTTTGCCCAGTGTTCGGTGTCCCAAACTCGGCGTCCCGGTGGTGGAAGGAGGCGGATaGGGAGAAGTAGGGAGACTG +
Preference number: 4 (lower is better)
Translates to: AGDSLLPSVRCPKLGVPVVEGGG*GEVGRL
Trigger: CAGTCTCCCTACTTCTCCCCATCCGCCTCCTTCCAC...CACCGGGACGCCGAGTTTGGGACACCGAACACTGGGCAAAAGAGAATCCCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CCA 90 bp GATTCTCTTTTGCCCAGTGTTCGGTGTCCCAAACTCGGCGTCCCGGTGCAAGGCTGGTGCAGCTTGTGGTaGAAGGAGGCGGATGGGGAG +
Preference number: 4 (lower is better)
Translates to: DSLLPSVRCPKLGVPVQGWCSLW*KEADGE
Trigger: CTCCCCATCCGCCTCCTTCCACCACAAGCTGCACCA...GCCTTGCACCGGGACGCCGAGTTTGGGACACCGAACACTGGGCAAAAGAGAATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CCA 90 bp GGAAGGCGAGGACGACAAAGGAAGGCAGGGGATTCTCTTTTGCCCAGTGTTCGGGGCTTCTTGGGGTCCTaGCTCCTGGCCGGCATGAAG +
Preference number: 4 (lower is better)
Translates to: GRRGRQRKAGDSLLPSVRGFLGS*LLAGMK
Trigger: CTTCATGCCGGCCAGGAGCCAGGACCCCAAGAAGCC...CCGAACACTGGGCAAAAGAGAATCCCCTGCCTTCCTTTGTCGTCCTCGCCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
3UTR CAA 72 bp AGGCGAGGACGACAAAGGAAGGCAGGGGATTCTCTTTaGCCCAGTGTTCGGTGTCCCAAACTCGGCGTCCCG +
Preference number: 4 (lower is better)
Translates to: RRGRQRKAGDSL*PSVRCPKLGVP
Trigger: CGGGACGCCGAGTTTGGGACACCGAACACTGGGCAAAAGAGAATCCCCTGCCTTCCTTTGTCGTCCTCGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR TCA 90 bp CTAACGCTGCTTTTCAATAGGTACGAACTGGCTGGGGAAGGCGAGGACGACAAACGAACATCTCGTCGCTaGGCTGCACCCGCGGCGGGT +
Preference number: 4 (lower is better)
Translates to: LTLLFNRYELAGEGEDDKRTSRR*AAPAAG
Trigger: ACCCGCCGCGGGTGCAGCTCAGCGACGAGATGTTCG...TTTGTCGTCCTCGCCTTCCCCAGCCAGTTCGTACCTATTGAAAAGCAGCGTTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR TCA 90 bp GATTCTCTTTTGCCCAGTGTTCGGTGTCCCAAACTCGGCGTCCCGGTGCAAGGCCGGTCACGGTGTCAATaGCCAGCTTCTGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: DSLLPSVRCPKLGVPVQGRSRCQ*PASAAA
Trigger: AGCTGCAGCAGAAGCTGGTCATTGACACCGTGACCG...GCCTTGCACCGGGACGCCGAGTTTGGGACACCGAACACTGGGCAAAAGAGAATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR GCA 90 bp TTTTCAATAGGTACGAACTGGCTGGGGAAGGCGAGGACGACAAAGGAAGGCAGGGGAGGAGCTGCAGGGTaGTGTCCTCCTTGCCACGGG +
Preference number: 4 (lower is better)
Translates to: FSIGTNWLGKARTTKEGRGGAAG*CPPCHG
Trigger: CCCGTGGCAAGGAGGACAGCACCCTGCAGCTCCTCC...CCTGCCTTCCTTTGTCGTCCTCGCCTTCCCCAGCCAGTTCGTACCTATTGAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR GCA 90 bp AGGCGAGGACGACAAAGGAAGGCAGGGGATTCTCTTTTGCCCAGTGTTCGGTGTTGCTCCAGCAGCTGCTaGAGCGCGCGATTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: RRGRQRKAGDSLLPSVRCCSSSC*SARFSS
Trigger: GGAGGAGAATCGCGCGCTGCAGCAGCTGCTGGAGCA...ACACCGAACACTGGGCAAAAGAGAATCCCCTGCCTTCCTTTGTCGTCCTCGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR GCA 90 bp AGTTTAGGAAGGCTGCTAACGCTGCTTTTCAATAGGTACGAACTGGCTGGGGAACCGGAGCCCTGGTCCTaGAGCAGCCCGGGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: SLGRLLTLLFNRYELAGEPEPWS*SSPGLQ
Trigger: CTGCAGCCCCGGGCTGCTGCAGGACCAGGGCTCCGG...TTCCCCAGCCAGTTCGTACCTATTGAAAAGCAGCGTTAGCAGCCTTCCTAAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR GCA 90 bp ACGAACTGGCTGGGGAAGGCGAGGACGACAAAGGAAGGCAGGGGATTCTCTTTTAGGGCCTGCAGCGCCTaGCTCATCTCTCTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: TNWLGKARTTKEGRGFSFRACSA*LISLSS
Trigger: GCTGCTGAGAGAGATGAGGCAGGCGCTGCAGGCCCT...AAAAGAGAATCCCCTGCCTTCCTTTGTCGTCCTCGCCTTCCCCAGCCAGTTCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR GCA 90 bp GGAAGGCTGCTAACGCTGCTTTTCAATAGGTACGAACTGGCTGGGGAAGGCGAGAGGGCCTGCAGCGCCTaGCTCATCTCTCTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GRLLTLLFNRYELAGEGERACSA*LISLSS
Trigger: GCTGCTGAGAGAGATGAGGCAGGCGCTGCAGGCCCT...CTCGCCTTCCCCAGCCAGTTCGTACCTATTGAAAAGCAGCGTTAGCAGCCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CCA 90 bp ACAAAGGAAGGCAGGGGATTCTCTTTTGCCCAGTGTTCGGTGTCCCAAACTCGGAGCTCCAGGTCGGCCTaGGACATGGGGCGCTCCATG +
Preference number: 4 (lower is better)
Translates to: TKEGRGFSFAQCSVSQTRSSRSA*DMGRSM
Trigger: CATGGAGCGCCCCATGTCCCAGGCCGACCTGGAGCT...CCGAGTTTGGGACACCGAACACTGGGCAAAAGAGAATCCCCTGCCTTCCTTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CCA 90 bp AGGTACGAACTGGCTGGGGAAGGCGAGGACGACAAAGGAAGGCAGGGGATTCTCGTGGAAGGAGGCGGATaGGGAGAAGTAGGGAGACTG +
Preference number: 4 (lower is better)
Translates to: RYELAGEGEDDKGRQGILVEGGG*GEVGRL
Trigger: CAGTCTCCCTACTTCTCCCCATCCGCCTCCTTCCAC...GAGAATCCCCTGCCTTCCTTTGTCGTCCTCGCCTTCCCCAGCCAGTTCGTACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CCA 90 bp GATTCTCTTTTGCCCAGTGTTCGGTGTCCCAAACTCGGCGTCCCGGTGCAAGGCTTGTGGTGCAGCTTGTaGTGGAAGGAGGCGGATGGG +
Preference number: 4 (lower is better)
Translates to: DSLLPSVRCPKLGVPVQGLWCSL*WKEADG
Trigger: CCCATCCGCCTCCTTCCACCACAAGCTGCACCACAA...GCCTTGCACCGGGACGCCGAGTTTGGGACACCGAACACTGGGCAAAAGAGAATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CCA 90 bp GAAGGCAGGGGATTCTCTTTTGCCCAGTGTTCGGTGTCCCAAACTCGGCGTCCCGCAGCATGCACTCCTTaGCCAGCCTCTTGTGGTGCA +
Preference number: 4 (lower is better)
Translates to: EGRGFSFAQCSVSQTRRPAACTP*PASCGA
Trigger: TGCACCACAAGAGGCTGGCCAAGGAGTGCATGCTGC...GGGACGCCGAGTTTGGGACACCGAACACTGGGCAAAAGAGAATCCCCTGCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CCA 90 bp CTTTTCAATAGGTACGAACTGGCTGGGGAAGGCGAGGACGACAAAGGAAGGCAGGTCTTTGTGCAGCAGTaGCGAGGGGGCCCGGCTCTC +
Preference number: 4 (lower is better)
Translates to: LFNRYELAGEGEDDKGRQVFVQQ*RGGPAL
Trigger: GAGAGCCGGGCCCCCTCGCCACTGCTGCACAAAGAC...CTGCCTTCCTTTGTCGTCCTCGCCTTCCCCAGCCAGTTCGTACCTATTGAAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CCA 90 bp GGCAGGGGATTCTCTTTTGCCCAGTGTTCGGTGTCCCAAACTCGGCGTCCCGGTTCAATAGGTACGAACTaGCTGGGGAAGGCGAGGACG +
Preference number: 4 (lower is better)
Translates to: GRGFSFAQCSVSQTRRPGSIGTN*LGKART
Trigger: CGTCCTCGCCTTCCCCAGCCAGTTCGTACCTATTGA...ACCGGGACGCCGAGTTTGGGACACCGAACACTGGGCAAAAGAGAATCCCCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CCA 90 bp CTTTTGCCCAGTGTTCGGTGTCCCAAACTCGGCGTCCCGGTGCAAGGCCGAGGCACATTTCAACCCCTCTaGTTGCATGGCCCTGGTCTT +
Preference number: 4 (lower is better)
Translates to: LLPSVRCPKLGVPVQGRGTFQPL*LHGPGL
Trigger: AAGACCAGGGCCATGCAACCAGAGGGGTTGAAATGT...GCCTCGGCCTTGCACCGGGACGCCGAGTTTGGGACACCGAACACTGGGCAAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378966.3
ENST00000610924.1
CDS-3UTR TCA 90 bp GGAAGGCTGCTAACGCTGCTTTTCAATAGGTACGAACTGGCTGGGGAAGGCGAGTTTCCATGCGCGCGGTaGCCTCGGTCACGGTGTCAA +
Preference number: 4 (lower is better)
Translates to: GRLLTLLFNRYELAGEGEFPCAR*PRSRCQ
Trigger: TTGACACCGTGACCGAGGTCACCGCGCGCATGGAAA...CTCGCCTTCCCCAGCCAGTTCGTACCTATTGAAAAGCAGCGTTAGCAGCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR TCA 90 bp ACGAACTGGCTGGGGAAGGCGAGGACGACAAAGGAAGGCAGGGGATTCTCTTTTTTTCCATGCGCGCGGTaGCCTCGGTCACGGTGTCAA +
Preference number: 4 (lower is better)
Translates to: TNWLGKARTTKEGRGFSFFPCAR*PRSRCQ
Trigger: TTGACACCGTGACCGAGGTCACCGCGCGCATGGAAA...AAAAGAGAATCCCCTGCCTTCCTTTGTCGTCCTCGCCTTCCCCAGCCAGTTCGT
58% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR TCA 90 bp AAGGAAGGCAGGGGATTCTCTTTTGCCCAGTGTTCGGTGTCCCAAACTCGGCGTCGTAGAGCTCCTCGATaGGCATTTCCATGCGCGCGG +
Preference number: 4 (lower is better)
Translates to: KEGRGFSFAQCSVSQTRRRRAPR*AFPCAR
Trigger: CCGCGCGCATGGAAATGCTCATCGAGGAGCTCTACG...ACGCCGAGTTTGGGACACCGAACACTGGGCAAAAGAGAATCCCCTGCCTTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR GCA 90 bp GTACGAACTGGCTGGGGAAGGCGAGGACGACAAAGGAAGGCAGGGGATTCTCTTGCCAGCCTCTTGTGGTaGAGCTTGTGGTGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: VRTGWGRRGRQRKAGDSLASLLW*SLWWKE
Trigger: CTCCTTCCACCACAAGCTGCACCACAAGAGGCTGGC...AAGAGAATCCCCTGCCTTCCTTTGTCGTCCTCGCCTTCCCCAGCCAGTTCGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR GCA 90 bp AATAGGTACGAACTGGCTGGGGAAGGCGAGGACGACAAAGGAAGGCAGGGGATTCCCAGCGAGGCCTTGTaGTCCTCCCAGAAGACCTGT +
Preference number: 4 (lower is better)
Translates to: NRYELAGEGEDDKGRQGIPSEAL*SSQKTC
Trigger: ACAGGTCTTCTGGGAGGAGCACAAGGCCTCGCTGGG...AATCCCCTGCCTTCCTTTGTCGTCCTCGCCTTCCCCAGCCAGTTCGTACCTATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR GCA 90 bp AAAGGAAGGCAGGGGATTCTCTTTTGCCCAGTGTTCGGTGTCCCAAACTCGGCGTCCTTGAGCAGGGCCTaGAGCGCCTGCCTCATCTCT +
Preference number: 4 (lower is better)
Translates to: KGRQGILFCPVFGVPNSASLSRA*SACLIS
Trigger: AGAGATGAGGCAGGCGCTGCAGGCCCTGCTCAAGGA...CGCCGAGTTTGGGACACCGAACACTGGGCAAAAGAGAATCCCCTGCCTTCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR GCA 90 bp CTTTTGCCCAGTGTTCGGTGTCCCAAACTCGGCGTCCCGGTGCAAGGCCGAGGCTCAATGACCAGCTTCTaGTGCAGCTTCAGCTTGTTG +
Preference number: 4 (lower is better)
Translates to: LLPSVRCPKLGVPVQGRGSMTSF*CSFSLL
Trigger: CAACAAGCTGAAGCTGCAGCAGAAGCTGGTCATTGA...GCCTCGGCCTTGCACCGGGACGCCGAGTTTGGGACACCGAACACTGGGCAAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR GCA 90 bp CTAACGCTGCTTTTCAATAGGTACGAACTGGCTGGGGAAGGCGAGGACGACAAAAACTCGGCGTCCCGGTaGAAGGCCGAGGCCTCAGAC +
Preference number: 4 (lower is better)
Translates to: LTLLFNRYELAGEGEDDKNSASR*KAEASD
Trigger: GTCTGAGGCCTCGGCCTTGCACCGGGACGCCGAGTT...TTTGTCGTCCTCGCCTTCCCCAGCCAGTTCGTACCTATTGAAAAGCAGCGTTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CCA 90 bp GGATTCTCTTTTGCCCAGTGTTCGGTGTCCCAAACTCGGCGTCCCGGTGCAAGGGTGCTGTACAAGTTGTaGAGCCTCGGGAAGGGTTCG +
Preference number: 4 (lower is better)
Translates to: GFSFAQCSVSQTRRPGARVLYKL*SLGKGS
Trigger: CGAACCCTTCCCGAGGCTCCACAACTTGTACAGCAC...CCTTGCACCGGGACGCCGAGTTTGGGACACCGAACACTGGGCAAAAGAGAATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CCA 90 bp GTACGAACTGGCTGGGGAAGGCGAGGACGACAAAGGAAGGCAGGGGATTCTCTTGGAGAAGCGGTTCAGTaGATAGGAGTGCTGGCTCGC +
Preference number: 4 (lower is better)
Translates to: VRTGWGRRGRQRKAGDSLGEAVQ*IGVLAR
Trigger: GCGAGCCAGCACTCCTATCCACTGAACCGCTTCTCC...AAGAGAATCCCCTGCCTTCCTTTGTCGTCCTCGCCTTCCCCAGCCAGTTCGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CCA 90 bp TCAATAGGTACGAACTGGCTGGGGAAGGCGAGGACGACAAAGGAAGGCAGGGGAGGAGAAGCGGTTCAGTaGATAGGAGTGCTGGCTCGC +
Preference number: 4 (lower is better)
Translates to: SIGTNWLGKARTTKEGRGGEAVQ*IGVLAR
Trigger: GCGAGCCAGCACTCCTATCCACTGAACCGCTTCTCC...TCCCCTGCCTTCCTTTGTCGTCCTCGCCTTCCCCAGCCAGTTCGTACCTATTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CCA 90 bp AATAGGTACGAACTGGCTGGGGAAGGCGAGGACGACAAAGGAAGGCAGGGGATTACATGGGGCGCTCCATaGGGTCTAAAGGCACGGAGG +
Preference number: 4 (lower is better)
Translates to: NRYELAGEGEDDKGRQGITWGAP*GLKARR
Trigger: CCTCCGTGCCTTTAGACCCCATGGAGCGCCCCATGT...AATCCCCTGCCTTCCTTTGTCGTCCTCGCCTTCCCCAGCCAGTTCGTACCTATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CCA 90 bp AGGCGAGGACGACAAAGGAAGGCAGGGGATTCTCTTTTGCCCAGTGTTCGGTGTACCCAGCGCCCGTCCTaGAACACGAACATCTCGTCG +
Preference number: 4 (lower is better)
Translates to: RRGRQRKAGDSLLPSVRCTQRPS*NTNISS
Trigger: CGACGAGATGTTCGTGTTCCAGGACGGGCGCTGGGT...ACACCGAACACTGGGCAAAAGAGAATCCCCTGCCTTCCTTTGTCGTCCTCGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CCA 90 bp GGAAGGCTGCTAACGCTGCTTTTCAATAGGTACGAACTGGCTGGGGAAGGCGAGACCCAGCGCCCGTCCTaGAACACGAACATCTCGTCG +
Preference number: 4 (lower is better)
Translates to: GRLLTLLFNRYELAGEGETQRPS*NTNISS
Trigger: CGACGAGATGTTCGTGTTCCAGGACGGGCGCTGGGT...CTCGCCTTCCCCAGCCAGTTCGTACCTATTGAAAAGCAGCGTTAGCAGCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CCA 90 bp AGGTACGAACTGGCTGGGGAAGGCGAGGACGACAAAGGAAGGCAGGGGATTCTCTTGGCCAGCCTCTTGTaGTGCAGCTTGTGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: RYELAGEGEDDKGRQGILLASLL*CSLWWK
Trigger: CTTCCACCACAAGCTGCACCACAAGAGGCTGGCCAA...GAGAATCCCCTGCCTTCCTTTGTCGTCCTCGCCTTCCCCAGCCAGTTCGTACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CCA 90 bp GGAAGGCGAGGACGACAAAGGAAGGCAGGGGATTCTCTTTTGCCCAGTGTTCGGGCAGCATGCACTCCTTaGCCAGCCTCTTGTGGTGCA +
Preference number: 4 (lower is better)
Translates to: GRRGRQRKAGDSLLPSVRAACTP*PASCGA
Trigger: TGCACCACAAGAGGCTGGCCAAGGAGTGCATGCTGC...CCGAACACTGGGCAAAAGAGAATCCCCTGCCTTCCTTTGTCGTCCTCGCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CCA 90 bp GTACGAACTGGCTGGGGAAGGCGAGGACGACAAAGGAAGGCAGGGGATTCTCTTGCAGCATGCACTCCTTaGCCAGCCTCTTGTGGTGCA +
Preference number: 4 (lower is better)
Translates to: VRTGWGRRGRQRKAGDSLAACTP*PASCGA
Trigger: TGCACCACAAGAGGCTGGCCAAGGAGTGCATGCTGC...AAGAGAATCCCCTGCCTTCCTTTGTCGTCCTCGCCTTCCCCAGCCAGTTCGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CCA 90 bp GAAGGCAGGGGATTCTCTTTTGCCCAGTGTTCGGTGTCCCAAACTCGGCGTCCCTCAATAGGTACGAACTaGCTGGGGAAGGCGAGGACG +
Preference number: 4 (lower is better)
Translates to: EGRGFSFAQCSVSQTRRPSIGTN*LGKART
Trigger: CGTCCTCGCCTTCCCCAGCCAGTTCGTACCTATTGA...GGGACGCCGAGTTTGGGACACCGAACACTGGGCAAAAGAGAATCCCCTGCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR TCA 90 bp TCAATAGGTACGAACTGGCTGGGGAAGGCGAGGACGACAAAGGAAGGCAGGGGATCTTGTTCTCCTTGCTaGGCATCCGGTTCTCCTCGC +
Preference number: 4 (lower is better)
Translates to: SIGTNWLGKARTTKEGRGSCSPC*ASGSPR
Trigger: GCGAGGAGAACCGGATGCTCAGCAAGGAGAACAAGA...TCCCCTGCCTTCCTTTGTCGTCCTCGCCTTCCCCAGCCAGTTCGTACCTATTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR TCA 90 bp ACGAACTGGCTGGGGAAGGCGAGGACGACAAAGGAAGGCAGGGGATTCTCTTTTCGGTCACGGTGTCAATaGCCAGCTTCTGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: TNWLGKARTTKEGRGFSFRSRCQ*PASAAA
Trigger: AGCTGCAGCAGAAGCTGGTCATTGACACCGTGACCG...AAAAGAGAATCCCCTGCCTTCCTTTGTCGTCCTCGCCTTCCCCAGCCAGTTCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR TCA 90 bp ACAAAGGAAGGCAGGGGATTCTCTTTTGCCCAGTGTTCGGTGTCCCAAACTCGGCGTAGAGCTCCTCGATaGGCATTTCCATGCGCGCGG +
Preference number: 4 (lower is better)
Translates to: TKEGRGFSFAQCSVSQTRRRAPR*AFPCAR
Trigger: CCGCGCGCATGGAAATGCTCATCGAGGAGCTCTACG...CCGAGTTTGGGACACCGAACACTGGGCAAAAGAGAATCCCCTGCCTTCCTTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR GCA 90 bp AGGCGAGGACGACAAAGGAAGGCAGGGGATTCTCTTTTGCCCAGTGTTCGGTGTGGAAGGGTTCGGCTGTaGCCCTCTGAGGTAGAACCA +
Preference number: 4 (lower is better)
Translates to: RRGRQRKAGDSLLPSVRCGRVRL*PSEVEP
Trigger: TGGTTCTACCTCAGAGGGGCACAGCCGAACCCTTCC...ACACCGAACACTGGGCAAAAGAGAATCCCCTGCCTTCCTTTGTCGTCCTCGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310521.6
CDS-3UTR GCA 90 bp AATAGGTACGAACTGGCTGGGGAAGGCGAGGACGACAAAGGAAGGCAGGGGATTGCCAGCCTCTTGTGGTaGAGCTTGTGGTGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: NRYELAGEGEDDKGRQGIASLLW*SLWWKE
Trigger: CTCCTTCCACCACAAGCTGCACCACAAGAGGCTGGC...AATCCCCTGCCTTCCTTTGTCGTCCTCGCCTTCCCCAGCCAGTTCGTACCTATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR GCA 90 bp GTACGAACTGGCTGGGGAAGGCGAGGACGACAAAGGAAGGCAGGGGATTCTCTTGACTTGTTCTCCTCCTaGAGCATGCACTCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: VRTGWGRRGRQRKAGDSLDLFSS*SMHSLA
Trigger: GGCCAAGGAGTGCATGCTGCAGGAGGAGAACAAGTC...AAGAGAATCCCCTGCCTTCCTTTGTCGTCCTCGCCTTCCCCAGCCAGTTCGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR GCA 90 bp CTTTTCAATAGGTACGAACTGGCTGGGGAAGGCGAGGACGACAAAGGAAGGCAGCCCAGCGAGGCCTTGTaGTCCTCCCAGAAGACCTGT +
Preference number: 4 (lower is better)
Translates to: LFNRYELAGEGEDDKGRQPSEAL*SSQKTC
Trigger: ACAGGTCTTCTGGGAGGAGCACAAGGCCTCGCTGGG...CTGCCTTCCTTTGTCGTCCTCGCCTTCCCCAGCCAGTTCGTACCTATTGAAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR GCA 90 bp CTAACGCTGCTTTTCAATAGGTACGAACTGGCTGGGGAAGGCGAGGACGACAAATCCTGGAAGCCCCTGTaGTCTGCCCGTAGCACCTGC +
Preference number: 4 (lower is better)
Translates to: LTLLFNRYELAGEGEDDKSWKPL*SARSTC
Trigger: GCAGGTGCTACGGGCAGAGCACAGGGGCTTCCAGGA...TTTGTCGTCCTCGCCTTCCCCAGCCAGTTCGTACCTATTGAAAAGCAGCGTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR GCA 90 bp AGGTACGAACTGGCTGGGGAAGGCGAGGACGACAAAGGAAGGCAGGGGATTCTCCAGGGGATTCTCTTTTaGCCAGTGTTCGGTGTCCCA +
Preference number: 4 (lower is better)
Translates to: RYELAGEGEDDKGRQGILQGILF*PVFGVP
Trigger: TGGGACACCGAACACTGGGCAAAAGAGAATCCCCTG...GAGAATCCCCTGCCTTCCTTTGTCGTCCTCGCCTTCCCCAGCCAGTTCGTACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR GCA 90 bp GATTCTCTTTTGCCCAGTGTTCGGTGTCCCAAACTCGGCGTCCCGGTGCAAGGCCAGGGGATTCTCTTTTaGCCAGTGTTCGGTGTCCCA +
Preference number: 4 (lower is better)
Translates to: DSLLPSVRCPKLGVPVQGQGILF*PVFGVP
Trigger: TGGGACACCGAACACTGGGCAAAAGAGAATCCCCTG...GCCTTGCACCGGGACGCCGAGTTTGGGACACCGAACACTGGGCAAAAGAGAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CCA 90 bp ACAAAGGAAGGCAGGGGATTCTCTTTTGCCCAGTGTTCGGTGTCCCAAACTCGGACATGGGGCGCTCCATaGGGTCTAAAGGCACGGAGG +
Preference number: 4 (lower is better)
Translates to: TKEGRGFSFAQCSVSQTRTWGAP*GLKARR
Trigger: CCTCCGTGCCTTTAGACCCCATGGAGCGCCCCATGT...CCGAGTTTGGGACACCGAACACTGGGCAAAAGAGAATCCCCTGCCTTCCTTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CCA 90 bp ACAAAGGAAGGCAGGGGATTCTCTTTTGCCCAGTGTTCGGTGTCCCAAACTCGGACCCAGCGCCCGTCCTaGAACACGAACATCTCGTCG +
Preference number: 4 (lower is better)
Translates to: TKEGRGFSFAQCSVSQTRTQRPS*NTNISS
Trigger: CGACGAGATGTTCGTGTTCCAGGACGGGCGCTGGGT...CCGAGTTTGGGACACCGAACACTGGGCAAAAGAGAATCCCCTGCCTTCCTTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CCA 90 bp AAGGAAGGCAGGGGATTCTCTTTTGCCCAGTGTTCGGTGTCCCAAACTCGGCGTTTGTGGTGCAGCTTGTaGTGGAAGGAGGCGGATGGG +
Preference number: 4 (lower is better)
Translates to: KEGRGFSFAQCSVSQTRRLWCSL*WKEADG
Trigger: CCCATCCGCCTCCTTCCACCACAAGCTGCACCACAA...ACGCCGAGTTTGGGACACCGAACACTGGGCAAAAGAGAATCCCCTGCCTTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR TCA 90 bp GATTCTCTTTTGCCCAGTGTTCGGTGTCCCAAACTCGGCGTCCCGGTGCAAGGCCTCATGGTTTCTCTCTaGGCATCACAGGTGGGAATG +
Preference number: 4 (lower is better)
Translates to: DSLLPSVRCPKLGVPVQGLMVSL*ASQVGM
Trigger: CATTCCCACCTGTGATGCTCAGAGAGAAACCATGAG...GCCTTGCACCGGGACGCCGAGTTTGGGACACCGAACACTGGGCAAAAGAGAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310521.6
CDS-3UTR TCA 90 bp AGGCGAGGACGACAAAGGAAGGCAGGGGATTCTCTTTTGCCCAGTGTTCGGTGTTCTTGTTCTCCTTGCTaGGCATCCGGTTCTCCTCGC +
Preference number: 4 (lower is better)
Translates to: RRGRQRKAGDSLLPSVRCSCSPC*ASGSPR
Trigger: GCGAGGAGAACCGGATGCTCAGCAAGGAGAACAAGA...ACACCGAACACTGGGCAAAAGAGAATCCCCTGCCTTCCTTTGTCGTCCTCGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR TCA 90 bp AGTTTAGGAAGGCTGCTAACGCTGCTTTTCAATAGGTACGAACTGGCTGGGGAAGGCTCCTGGCCGGCATaGAGGCGTAGAGCTCCTCGA +
Preference number: 4 (lower is better)
Translates to: SLGRLLTLLFNRYELAGEGSWPA*RRRAPR
Trigger: TCGAGGAGCTCTACGCCTTCATGCCGGCCAGGAGCC...TTCCCCAGCCAGTTCGTACCTATTGAAAAGCAGCGTTAGCAGCCTTCCTAAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR GCA 90 bp ACGAACTGGCTGGGGAAGGCGAGGACGACAAAGGAAGGCAGGGGATTCTCTTTTGGAAGGGTTCGGCTGTaGCCCTCTCTGCATTGGATT +
Preference number: 4 (lower is better)
Translates to: TNWLGKARTTKEGRGFSFGRVRL*PSLHWI
Trigger: AATCCAATGCAGAGAGGGGCACAGCCGAACCCTTCC...AAAAGAGAATCCCCTGCCTTCCTTTGTCGTCCTCGCCTTCCCCAGCCAGTTCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CCA 90 bp AAAGGAAGGCAGGGGATTCTCTTTTGCCCAGTGTTCGGTGTCCCAAACTCGGCGGTGCTGTACAAGTTGTaGAGCCTCGGGAAGGGTTCG +
Preference number: 4 (lower is better)
Translates to: KGRQGILFCPVFGVPNSAVLYKL*SLGKGS
Trigger: CGAACCCTTCCCGAGGCTCCACAACTTGTACAGCAC...CGCCGAGTTTGGGACACCGAACACTGGGCAAAAGAGAATCCCCTGCCTTCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CCA 90 bp CTAACGCTGCTTTTCAATAGGTACGAACTGGCTGGGGAAGGCGAGGACGACAAATGGTGCAGCTTGTGGTaGAAGGAGGCGGATGGGGAG +
Preference number: 4 (lower is better)
Translates to: LTLLFNRYELAGEGEDDKWCSLW*KEADGE
Trigger: CTCCCCATCCGCCTCCTTCCACCACAAGCTGCACCA...TTTGTCGTCCTCGCCTTCCCCAGCCAGTTCGTACCTATTGAAAAGCAGCGTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CCA 90 bp GGAAGGCTGCTAACGCTGCTTTTCAATAGGTACGAACTGGCTGGGGAAGGCGAGTTGGCCAGCCTCTTGTaGTGCAGCTTGTGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: GRLLTLLFNRYELAGEGELASLL*CSLWWK
Trigger: CTTCCACCACAAGCTGCACCACAAGAGGCTGGCCAA...CTCGCCTTCCCCAGCCAGTTCGTACCTATTGAAAAGCAGCGTTAGCAGCCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CCA 90 bp AAAGGAAGGCAGGGGATTCTCTTTTGCCCAGTGTTCGGTGTCCCAAACTCGGCGTTGGCCAGCCTCTTGTaGTGCAGCTTGTGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: KGRQGILFCPVFGVPNSALASLL*CSLWWK
Trigger: CTTCCACCACAAGCTGCACCACAAGAGGCTGGCCAA...CGCCGAGTTTGGGACACCGAACACTGGGCAAAAGAGAATCCCCTGCCTTCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CCA 90 bp AATAGGTACGAACTGGCTGGGGAAGGCGAGGACGACAAAGGAAGGCAGGGGATTTCAATAGGTACGAACTaGCTGGGGAAGGCGAGGACG +
Preference number: 4 (lower is better)
Translates to: NRYELAGEGEDDKGRQGISIGTN*LGKART
Trigger: CGTCCTCGCCTTCCCCAGCCAGTTCGTACCTATTGA...AATCCCCTGCCTTCCTTTGTCGTCCTCGCCTTCCCCAGCCAGTTCGTACCTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CCA 90 bp GGCAGGGGATTCTCTTTTGCCCAGTGTTCGGTGTCCCAAACTCGGCGTCCCGGTAAGCATCTATGCCCATaGCCCCTACATCTGTCTTTG +
Preference number: 4 (lower is better)
Translates to: GRGFSFAQCSVSQTRRPGKHLCP*PLHLSL
Trigger: CAAAGACAGATGTAGGGGCCATGGGCATAGATGCTT...ACCGGGACGCCGAGTTTGGGACACCGAACACTGGGCAAAAGAGAATCCCCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000378966.3
CDS-3UTR CCA 90 bp GAAGGCAGGGGATTCTCTTTTGCCCAGTGTTCGGTGTCCCAAACTCGGCGTCCCCTGGTTGCATGGCCCTaGTCTTCCAATGAGGACTTA +
Preference number: 4 (lower is better)
Translates to: EGRGFSFAQCSVSQTRRPLVAWP*SSNEDL
Trigger: TAAGTCCTCATTGGAAGACCAGGGCCATGCAACCAG...GGGACGCCGAGTTTGGGACACCGAACACTGGGCAAAAGAGAATCCCCTGCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CCA 90 bp AGGTACGAACTGGCTGGGGAAGGCGAGGACGACAAAGGAAGGCAGGGGATTCTCCTGGTTGCATGGCCCTaGTCTTCCAATGAGGACTTA +
Preference number: 4 (lower is better)
Translates to: RYELAGEGEDDKGRQGILLVAWP*SSNEDL
Trigger: TAAGTCCTCATTGGAAGACCAGGGCCATGCAACCAG...GAGAATCCCCTGCCTTCCTTTGTCGTCCTCGCCTTCCCCAGCCAGTTCGTACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378966.3
ENST00000610924.1
CDS-3UTR TCA 90 bp CTTTTCAATAGGTACGAACTGGCTGGGGAAGGCGAGGACGACAAAGGAAGGCAGTCTTGTTCTCCTTGCTaGGCATCCGGTTCTCCTCGC +
Preference number: 4 (lower is better)
Translates to: LFNRYELAGEGEDDKGRQSCSPC*ASGSPR
Trigger: GCGAGGAGAACCGGATGCTCAGCAAGGAGAACAAGA...CTGCCTTCCTTTGTCGTCCTCGCCTTCCCCAGCCAGTTCGTACCTATTGAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR TCA 90 bp GGTACGAACTGGCTGGGGAAGGCGAGGACGACAAAGGAAGGCAGGGGATTCTCTCCCTTTGTCCACGGATaGGGTTTTCTTCTCATGGAT +
Preference number: 4 (lower is better)
Translates to: GTNWLGKARTTKEGRGFSPFVHG*GFLLMD
Trigger: ATCCATGAGAAGAAAACCTCATCCGTGGACAAAGGG...AGAGAATCCCCTGCCTTCCTTTGTCGTCCTCGCCTTCCCCAGCCAGTTCGTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000378966.3
CDS-3UTR TCA 90 bp CTTTTCAATAGGTACGAACTGGCTGGGGAAGGCGAGGACGACAAAGGAAGGCAGAGGCAGGAGGAGACCTaGGACTCTATAGCCTGTGAG +
Preference number: 4 (lower is better)
Translates to: LFNRYELAGEGEDDKGRQRQEET*DSIACE
Trigger: CTCACAGGCTATAGAGTCTCAGGTCTCCTCCTGCCT...CTGCCTTCCTTTGTCGTCCTCGCCTTCCCCAGCCAGTTCGTACCTATTGAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378966.3
CDS-3UTR GCA 90 bp AGTTTAGGAAGGCTGCTAACGCTGCTTTTCAATAGGTACGAACTGGCTGGGGAAGCGCGCAGCGAGGGGTaGTGTACAAGTTGTGGAGCC +
Preference number: 4 (lower is better)
Translates to: SLGRLLTLLFNRYELAGEARSEG*CTSCGA
Trigger: GGCTCCACAACTTGTACAGCACCCCTCGCTGCGCGC...TTCCCCAGCCAGTTCGTACCTATTGAAAAGCAGCGTTAGCAGCCTTCCTAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR GCA 90 bp TTTTCAATAGGTACGAACTGGCTGGGGAAGGCGAGGACGACAAAGGAAGGCAGGGACTTGTTCTCCTCCTaGAGCATGCACTCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: FSIGTNWLGKARTTKEGRDLFSS*SMHSLA
Trigger: GGCCAAGGAGTGCATGCTGCAGGAGGAGAACAAGTC...CCTGCCTTCCTTTGTCGTCCTCGCCTTCCCCAGCCAGTTCGTACCTATTGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR GCA 90 bp AGGTACGAACTGGCTGGGGAAGGCGAGGACGACAAAGGAAGGCAGGGGATTCTCATGACCAGCTTCTGCTaGAGCTTCAGCTTGTTGTTC +
Preference number: 4 (lower is better)
Translates to: RYELAGEGEDDKGRQGILMTSFC*SFSLLF
Trigger: GAACAACAAGCTGAAGCTGCAGCAGAAGCTGGTCAT...GAGAATCCCCTGCCTTCCTTTGTCGTCCTCGCCTTCCCCAGCCAGTTCGTACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR GCA 90 bp GGATTCTCTTTTGCCCAGTGTTCGGTGTCCCAAACTCGGCGTCCCGGTGCAAGGTCAATGACCAGCTTCTaGTGCAGCTTCAGCTTGTTG +
Preference number: 4 (lower is better)
Translates to: GFSFAQCSVSQTRRPGARSMTSF*CSFSLL
Trigger: CAACAAGCTGAAGCTGCAGCAGAAGCTGGTCATTGA...CCTTGCACCGGGACGCCGAGTTTGGGACACCGAACACTGGGCAAAAGAGAATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR GCA 90 bp TTTTCAATAGGTACGAACTGGCTGGGGAAGGCGAGGACGACAAAGGAAGGCAGGGGCTGTGCCCCTCTCTaGATTGGATTCCTCCATCCT +
Preference number: 4 (lower is better)
Translates to: FSIGTNWLGKARTTKEGRGCAPL*IGFLHP
Trigger: AGGATGGAGGAATCCAATGCAGAGAGGGGCACAGCC...CCTGCCTTCCTTTGTCGTCCTCGCCTTCCCCAGCCAGTTCGTACCTATTGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000378966.3
ENST00000610924.1
CDS-3UTR GCA 90 bp CTTTTCAATAGGTACGAACTGGCTGGGGAAGGCGAGGACGACAAAGGAAGGCAGGGAAGGGTTCGGCTGTaGCCCTCTCTGCATTGGATT +
Preference number: 4 (lower is better)
Translates to: LFNRYELAGEGEDDKGRQGRVRL*PSLHWI
Trigger: AATCCAATGCAGAGAGGGGCACAGCCGAACCCTTCC...CTGCCTTCCTTTGTCGTCCTCGCCTTCCCCAGCCAGTTCGTACCTATTGAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CCA 90 bp CTAACGCTGCTTTTCAATAGGTACGAACTGGCTGGGGAAGGCGAGGACGACAAAGTGGAAGGAGGCGGATaGGGAGAAGTAGGGAGACTG +
Preference number: 4 (lower is better)
Translates to: LTLLFNRYELAGEGEDDKVEGGG*GEVGRL
Trigger: CAGTCTCCCTACTTCTCCCCATCCGCCTCCTTCCAC...TTTGTCGTCCTCGCCTTCCCCAGCCAGTTCGTACCTATTGAAAAGCAGCGTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CCA 90 bp TTTTCAATAGGTACGAACTGGCTGGGGAAGGCGAGGACGACAAAGGAAGGCAGGACCCCTCTGGTTGCATaGCCCTGGTCTTCCAATGAG +
Preference number: 4 (lower is better)
Translates to: FSIGTNWLGKARTTKEGRTPLVA*PWSSNE
Trigger: CTCATTGGAAGACCAGGGCCATGCAACCAGAGGGGT...CCTGCCTTCCTTTGTCGTCCTCGCCTTCCCCAGCCAGTTCGTACCTATTGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378966.3
ENST00000610924.1
CDS-3UTR TCA 90 bp CTCTTTTGCCCAGTGTTCGGTGTCCCAAACTCGGCGTCCCGGTGCAAGGCCGAGAGAACATTCCAGAGGTaGCATCACAAAACAATATGG +
Preference number: 4 (lower is better)
Translates to: LFCPVFGVPNSASRCKAERTFQR*HHKTIW
Trigger: CCATATTGTTTTGTGATGTCACCTCTGGAATGTTCT...CTCGGCCTTGCACCGGGACGCCGAGTTTGGGACACCGAACACTGGGCAAAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310521.6
CDS-3UTR GCA 90 bp ACAAAGGAAGGCAGGGGATTCTCTTTTGCCCAGTGTTCGGTGTCCCAAACTCGGCAGGGGATTCTCTTTTaGCCAGTGTTCGGTGTCCCA +
Preference number: 4 (lower is better)
Translates to: TKEGRGFSFAQCSVSQTRQGILF*PVFGVP
Trigger: TGGGACACCGAACACTGGGCAAAAGAGAATCCCCTG...CCGAGTTTGGGACACCGAACACTGGGCAAAAGAGAATCCCCTGCCTTCCTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR GCA 90 bp CTCTTTTGCCCAGTGTTCGGTGTCCCAAACTCGGCGTCCCGGTGCAAGGCCGAGGAAATCCAGAGTGATTaGACAACACTAAGCACCAAA +
Preference number: 4 (lower is better)
Translates to: LFCPVFGVPNSASRCKAEEIQSD*TTLSTK
Trigger: TTTGGTGCTTAGTGTTGTGCAATCACTCTGGATTTC...CTCGGCCTTGCACCGGGACGCCGAGTTTGGGACACCGAACACTGGGCAAAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378966.3
CDS-3UTR CCA 90 bp ATTAAAACTCTGAGTTTAGGAAGGCTGCTAACGCTGCTTTTCAATAGGTACGAAGGGCGCGCAGCTCCTTaGAGTCCTCCTGCCGGGCCG +
Preference number: 4 (lower is better)
Translates to: IKTLSLGRLLTLLFNRYEGRAAP*SPPAGP
Trigger: CGGCCCGGCAGGAGGACTCCAAGGAGCTGCGCGCCC...TTCGTACCTATTGAAAAGCAGCGTTAGCAGCCTTCCTAAACTCAGAGTTTTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CCA 90 bp ATTAAAACTCTGAGTTTAGGAAGGCTGCTAACGCTGCTTTTCAATAGGTACGAAAGCAGCTGCAGGGGCTaGCAGCCGTCGGGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: IKTLSLGRLLTLLFNRYESSCRG*QPSGRP
Trigger: GGGCCTGCCCGACGGCTGCCAGCCCCTGCAGCTGCT...TTCGTACCTATTGAAAAGCAGCGTTAGCAGCCTTCCTAAACTCAGAGTTTTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CCA 90 bp ACGAACTGGCTGGGGAAGGCGAGGACGACAAAGGAAGGCAGGGGATTCTCTTTTACATTTCAACCCCTCTaGTTGCATGGCCCTGGTCTT +
Preference number: 4 (lower is better)
Translates to: TNWLGKARTTKEGRGFSFTFQPL*LHGPGL
Trigger: AAGACCAGGGCCATGCAACCAGAGGGGTTGAAATGT...AAAAGAGAATCCCCTGCCTTCCTTTGTCGTCCTCGCCTTCCCCAGCCAGTTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000378966.3
ENST00000610924.1
CDS-3UTR TCA 90 bp GGAAGGCTGCTAACGCTGCTTTTCAATAGGTACGAACTGGCTGGGGAAGGCGAGAAAGCCACCCCTTTGTaGCATAGCAGCAGTAGAAAC +
Preference number: 4 (lower is better)
Translates to: GRLLTLLFNRYELAGEGEKATPL*HSSSRN
Trigger: GTTTCTACTGCTGCTATGTCACAAAGGGGTGGCTTT...CTCGCCTTCCCCAGCCAGTTCGTACCTATTGAAAAGCAGCGTTAGCAGCCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000378966.3
CDS-3UTR GCA 90 bp AGTTTAGGAAGGCTGCTAACGCTGCTTTTCAATAGGTACGAACTGGCTGGGGAAGCCAGCCTCTTGTGGTaGAGCTTGTGGTGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: SLGRLLTLLFNRYELAGEASLLW*SLWWKE
Trigger: CTCCTTCCACCACAAGCTGCACCACAAGAGGCTGGC...TTCCCCAGCCAGTTCGTACCTATTGAAAAGCAGCGTTAGCAGCCTTCCTAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR GCA 90 bp GGAAGGCTGCTAACGCTGCTTTTCAATAGGTACGAACTGGCTGGGGAAGGCGAGATGACCAGCTTCTGCTaGAGCTTCAGCTTGTTGTTC +
Preference number: 4 (lower is better)
Translates to: GRLLTLLFNRYELAGEGEMTSFC*SFSLLF
Trigger: GAACAACAAGCTGAAGCTGCAGCAGAAGCTGGTCAT...CTCGCCTTCCCCAGCCAGTTCGTACCTATTGAAAAGCAGCGTTAGCAGCCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CCA 90 bp AGTTTAGGAAGGCTGCTAACGCTGCTTTTCAATAGGTACGAACTGGCTGGGGAAGGAGAAGCGGTTCAGTaGATAGGAGTGCTGGCTCGC +
Preference number: 4 (lower is better)
Translates to: SLGRLLTLLFNRYELAGEGEAVQ*IGVLAR
Trigger: GCGAGCCAGCACTCCTATCCACTGAACCGCTTCTCC...TTCCCCAGCCAGTTCGTACCTATTGAAAAGCAGCGTTAGCAGCCTTCCTAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR TCA 90 bp AGGCGAGGACGACAAAGGAAGGCAGGGGATTCTCTTTTGCCCAGTGTTCGGTGTCCCTACATCTGTCTTTaGTGCATAGCAGGGCTTAAT +
Preference number: 4 (lower is better)
Translates to: RRGRQRKAGDSLLPSVRCPYICL*CIAGLN
Trigger: ATTAAGCCCTGCTATGCATCAAAGACAGATGTAGGG...ACACCGAACACTGGGCAAAAGAGAATCCCCTGCCTTCCTTTGTCGTCCTCGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378966.3
CDS-3UTR TCA 90 bp GGATTCTCTTTTGCCCAGTGTTCGGTGTCCCAAACTCGGCGTCCCGGTGCAAGGCACCAATTCATTGACTaGAAAAGCATCTATGCCCAT +
Preference number: 4 (lower is better)
Translates to: GFSFAQCSVSQTRRPGARHQFID*KSIYAH
Trigger: ATGGGCATAGATGCTTTTTCAGTCAATGAATTGGTG...CCTTGCACCGGGACGCCGAGTTTGGGACACCGAACACTGGGCAAAAGAGAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378966.3
CDS-3UTR TCA 90 bp TCAATAGGTACGAACTGGCTGGGGAAGGCGAGGACGACAAAGGAAGGCAGGGGAAGACTCTATAGCCTGTaGGGACTTCACCAATTCATT +
Preference number: 4 (lower is better)
Translates to: SIGTNWLGKARTTKEGRGRLYSL*GLHQFI
Trigger: AATGAATTGGTGAAGTCCTCACAGGCTATAGAGTCT...TCCCCTGCCTTCCTTTGTCGTCCTCGCCTTCCCCAGCCAGTTCGTACCTATTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378966.3
CDS-3UTR GCA 90 bp AGTTTAGGAAGGCTGCTAACGCTGCTTTTCAATAGGTACGAACTGGCTGGGGAAGACTTGTTCTCCTCCTaGAGCATGCACTCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: SLGRLLTLLFNRYELAGEDLFSS*SMHSLA
Trigger: GGCCAAGGAGTGCATGCTGCAGGAGGAGAACAAGTC...TTCCCCAGCCAGTTCGTACCTATTGAAAAGCAGCGTTAGCAGCCTTCCTAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CCA 90 bp AGTTTAGGAAGGCTGCTAACGCTGCTTTTCAATAGGTACGAACTGGCTGGGGAAACCCCTCTGGTTGCATaGCCCTGGTCTTCCAATGAG +
Preference number: 4 (lower is better)
Translates to: SLGRLLTLLFNRYELAGETPLVA*PWSSNE
Trigger: CTCATTGGAAGACCAGGGCCATGCAACCAGAGGGGT...TTCCCCAGCCAGTTCGTACCTATTGAAAAGCAGCGTTAGCAGCCTTCCTAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378966.3
ENST00000610924.1
CDS-3UTR TCA 90 bp AGTTTAGGAAGGCTGCTAACGCTGCTTTTCAATAGGTACGAACTGGCTGGGGAAGCCTTGAGTGCAATGTaGGTTGCCAGGTATAGGTCC +
Preference number: 4 (lower is better)
Translates to: SLGRLLTLLFNRYELAGEALSAM*VARYRS
Trigger: GGACCTATACCTGGCAACTCACATTGCACTCAAGGC...TTCCCCAGCCAGTTCGTACCTATTGAAAAGCAGCGTTAGCAGCCTTCCTAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310521.6
CDS-3UTR TCA 90 bp AATAGGTACGAACTGGCTGGGGAAGGCGAGGACGACAAAGGAAGGCAGGGGATTTGTATAATTTGGCCTTaGGTGCAATGTGAGTTGCCA +
Preference number: 4 (lower is better)
Translates to: NRYELAGEGEDDKGRQGICIIWP*VQCELP
Trigger: TGGCAACTCACATTGCACTCAAGGCCAAATTATACA...AATCCCCTGCCTTCCTTTGTCGTCCTCGCCTTCCCCAGCCAGTTCGTACCTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310521.6
CDS-3UTR TCA 90 bp AATAGGTACGAACTGGCTGGGGAAGGCGAGGACGACAAAGGAAGGCAGGGGATTGAGGTAGAACCACACTaGTTGGAATTTCTAGGCTTT +
Preference number: 4 (lower is better)
Translates to: NRYELAGEGEDDKGRQGIEVEPH*LEFLGF
Trigger: AAAGCCTAGAAATTCCAATCAGTGTGGTTCTACCTC...AATCCCCTGCCTTCCTTTGTCGTCCTCGCCTTCCCCAGCCAGTTCGTACCTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310521.6
CDS-3UTR GCA 90 bp ATTAAAACTCTGAGTTTAGGAAGGCTGCTAACGCTGCTTTTCAATAGGTACGAAAACTCGGCGTCCCGGTaGAAGGCCGAGGCCTCAGAC +
Preference number: 4 (lower is better)
Translates to: IKTLSLGRLLTLLFNRYENSASR*KAEASD
Trigger: GTCTGAGGCCTCGGCCTTGCACCGGGACGCCGAGTT...TTCGTACCTATTGAAAAGCAGCGTTAGCAGCCTTCCTAAACTCAGAGTTTTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR GCA 90 bp ATTAAAACTCTGAGTTTAGGAAGGCTGCTAACGCTGCTTTTCAATAGGTACGAAAGGGCCTGCAGCGCCTaGCTCATCTCTCTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: IKTLSLGRLLTLLFNRYERACSA*LISLSS
Trigger: GCTGCTGAGAGAGATGAGGCAGGCGCTGCAGGCCCT...TTCGTACCTATTGAAAAGCAGCGTTAGCAGCCTTCCTAAACTCAGAGTTTTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR GCA 90 bp ATTAAAACTCTGAGTTTAGGAAGGCTGCTAACGCTGCTTTTCAATAGGTACGAATCCTGGAAGCCCCTGTaGTCTGCCCGTAGCACCTGC +
Preference number: 4 (lower is better)
Translates to: IKTLSLGRLLTLLFNRYESWKPL*SARSTC
Trigger: GCAGGTGCTACGGGCAGAGCACAGGGGCTTCCAGGA...TTCGTACCTATTGAAAAGCAGCGTTAGCAGCCTTCCTAAACTCAGAGTTTTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CCA 90 bp CTTTTCAATAGGTACGAACTGGCTGGGGAAGGCGAGGACGACAAAGGAAGGCAGGTCCTATGCAGAAGTTaGTCACCAAAACACTCAGAA +
Preference number: 4 (lower is better)
Translates to: LFNRYELAGEGEDDKGRQVLCRS*SPKHSE
Trigger: TTCTGAGTGTTTTGGTGACCAACTTCTGCATAGGAC...CTGCCTTCCTTTGTCGTCCTCGCCTTCCCCAGCCAGTTCGTACCTATTGAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310521.6
CDS-3UTR GCA 90 bp ATTAAAACTCTGAGTTTAGGAAGGCTGCTAACGCTGCTTTTCAATAGGTACGAATTCTGCTCCAGCAGCTaGTGCAGCGCGCGATTCTCC +
Preference number: 4 (lower is better)
Translates to: IKTLSLGRLLTLLFNRYEFCSSS*CSARFS
Trigger: GGAGAATCGCGCGCTGCAGCAGCTGCTGGAGCAGAA...TTCGTACCTATTGAAAAGCAGCGTTAGCAGCCTTCCTAAACTCAGAGTTTTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR GCA 90 bp AGTTTAGGAAGGCTGCTAACGCTGCTTTTCAATAGGTACGAACTGGCTGGGGAATCAATGACCAGCTTCTaGTGCAGCTTCAGCTTGTTG +
Preference number: 4 (lower is better)
Translates to: SLGRLLTLLFNRYELAGESMTSF*CSFSLL
Trigger: CAACAAGCTGAAGCTGCAGCAGAAGCTGGTCATTGA...TTCCCCAGCCAGTTCGTACCTATTGAAAAGCAGCGTTAGCAGCCTTCCTAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CCA 90 bp ACGAACTGGCTGGGGAAGGCGAGGACGACAAAGGAAGGCAGGGGATTCTCTTTTCATCACAAAACAATATaGTGTTTTTCAGGGCTCATG +
Preference number: 4 (lower is better)
Translates to: TNWLGKARTTKEGRGFSFHHKTI*CFSGLM
Trigger: CATGAGCCCTGAAAAACACCATATTGTTTTGTGATG...AAAAGAGAATCCCCTGCCTTCCTTTGTCGTCCTCGCCTTCCCCAGCCAGTTCGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000310521.6
CDS-3UTR CCA 90 bp ATTAAAACTCTGAGTTTAGGAAGGCTGCTAACGCTGCTTTTCAATAGGTACGAATGGTGCAGCTTGTGGTaGAAGGAGGCGGATGGGGAG +
Preference number: 4 (lower is better)
Translates to: IKTLSLGRLLTLLFNRYEWCSLW*KEADGE
Trigger: CTCCCCATCCGCCTCCTTCCACCACAAGCTGCACCA...TTCGTACCTATTGAAAAGCAGCGTTAGCAGCCTTCCTAAACTCAGAGTTTTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR TCA 90 bp CTTTTCAATAGGTACGAACTGGCTGGGGAAGGCGAGGACGACAAAGGAAGGCAGACTTCACCAATTCATTaGCTGAAAAAGCATCTATGC +
Preference number: 4 (lower is better)
Translates to: LFNRYELAGEGEDDKGRQTSPIH*LKKHLC
Trigger: GCATAGATGCTTTTTCAGTCAATGAATTGGTGAAGT...CTGCCTTCCTTTGTCGTCCTCGCCTTCCCCAGCCAGTTCGTACCTATTGAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000378966.3
CDS GCA 90 bp TGCGGCTCAGCCGGGGCAGGGCGGCCTGCTGCGCGCAGCGAGGGGTaGTGTACAAGTTGTGGAGCCTCGGGAAGGGTTCGGCTGTGCCCC +
Preference number: 5 (lower is better)
Translates to: CGSAGAGRPAARSEG*CTSCGASGRVRLCP
Trigger: GGGGCACAGCCGAACCCTTCCCGAGGCTCCACAACTTGTACAGCACCCCTCGCTGCGCGCAGCAGGCCGCCCTGCCCCGGCTGAGCCGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000533564.1
ENST00000610924.1
CDS GCA 90 bp CGGAGGAGAAGCGGTTCAGTGGATAGGAGTGCTGGCTCGCCATCCTaGGGCTCAGCCGGGGCAGGGCGGCCTGCTGCGCGCAGCGAGGGG +
Preference number: 5 (lower is better)
Translates to: RRRSGSVDRSAGSPS*GSAGAGRPAARSEG
Trigger: CCCCTCGCTGCGCGCAGCAGGCCGCCCTGCCCCGGCTGAGCCGCAGGATGGCGAGCCAGCACTCCTATCCACTGAACCGCTTCTCCTCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000533564.1
ENST00000610924.1
CDS GCA 90 bp TGCTGGCTCGCCATCCTGCGGCTCAGCCGGGGCAGGGCGGCCTGCTaGGCGCAGCGAGGGGTGCTGTACAAGTTGTGGAGCCTCGGGAAG +
Preference number: 5 (lower is better)
Translates to: CWLAILRLSRGRAAC*AQRGVLYKLWSLGK
Trigger: CTTCCCGAGGCTCCACAACTTGTACAGCACCCCTCGCTGCGCGCAGCAGGCCGCCCTGCCCCGGCTGAGCCGCAGGATGGCGAGCCAGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000533564.1
ENST00000610924.1
CDS GCA 90 bp GCAGCTGCTGCAGCGCGCGATTCTCCTCCCGGAGGAGCTGCAGGGTaGTGTCCTCCTTGCCACGGGGCACCTGCAGGGCGACGTGGTCCT +
Preference number: 5 (lower is better)
Translates to: AAAAARDSPPGGAAG*CPPCHGAPAGRRGP
Trigger: AGGACCACGTCGCCCTGCAGGTGCCCCGTGGCAAGGAGGACAGCACCCTGCAGCTCCTCCGGGAGGAGAATCGCGCGCTGCAGCAGCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS GCA 90 bp TGCTCCAGCAGCTGCTGCAGCGCGCGATTCTCCTCCCGGAGGAGCTaGAGGGTGCTGTCCTCCTTGCCACGGGGCACCTGCAGGGCGACG +
Preference number: 5 (lower is better)
Translates to: CSSSCCSARFSSRRS*RVLSSLPRGTCRAT
Trigger: CGTCGCCCTGCAGGTGCCCCGTGGCAAGGAGGACAGCACCCTGCAGCTCCTCCGGGAGGAGAATCGCGCGCTGCAGCAGCTGCTGGAGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CAA 90 bp CTTTTGCCCAGTGTTCGGTGTCCCAAACTCGGCGTCCCGGTGCAAGGCCGAGGCAGGCCCGGGCCCACCTaGGCCTCCTCCTCCCCGGAG +
Preference number: 5 (lower is better)
Translates to: LLPSVRCPKLGVPVQGRGRPGPT*ASSSPE
Trigger: CTCCGGGGAGGAGGAGGCCAAGGTGGGCCCGGGCCT...GCCTCGGCCTTGCACCGGGACGCCGAGTTTGGGACACCGAACACTGGGCAAAAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS GCA 90 bp GCGACGTGGTCCTTCTTCACCACCTCCAGGGACGCGCTGTCTTTGTaGAGCAGTGGCGAGGGGGCCCGGCTCTCCTCTCGGCCCAGCGAG +
Preference number: 5 (lower is better)
Translates to: ATWSFFTTSRDALSL*SSGEGARLSSRPSE
Trigger: CTCGCTGGGCCGAGAGGAGAGCCGGGCCCCCTCGCCACTGCTGCACAAAGACAGCGCGTCCCTGGAGGTGGTGAAGAAGGACCACGTCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CAA 90 bp CTTTTGCCCAGTGTTCGGTGTCCCAAACTCGGCGTCCCGGTGCAAGGCCGAGGCCGGGCCGGAGGCCCTTaGGGCTCCTCGAAGCGGGAG +
Preference number: 5 (lower is better)
Translates to: LLPSVRCPKLGVPVQGRGRAGGP*GSSKRE
Trigger: CTCCCGCTTCGAGGAGCCCAAAGGGCCTCCGGCCCG...GCCTCGGCCTTGCACCGGGACGCCGAGTTTGGGACACCGAACACTGGGCAAAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS CCA 90 bp GTCCTTCTTCACCACCTCCAGGGACGCGCTGTCTTTGTGCAGCAGTaGCGAGGGGGCCCGGCTCTCCTCTCGGCCCAGCGAGGCCTTGTG +
Preference number: 5 (lower is better)
Translates to: VLLHHLQGRAVFVQQ*RGGPALLSAQRGLV
Trigger: CACAAGGCCTCGCTGGGCCGAGAGGAGAGCCGGGCCCCCTCGCCACTGCTGCACAAAGACAGCGCGTCCCTGGAGGTGGTGAAGAAGGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CAA 90 bp CTCTTTTGCCCAGTGTTCGGTGTCCCAAACTCGGCGTCCCGGTGCAAGGCCGAGAGGGCGCGCAGCTCCTaGGAGTCCTCCTGCCGGGCC +
Preference number: 5 (lower is better)
Translates to: LFCPVFGVPNSASRCKAERARSS*ESSCRA
Trigger: GGCCCGGCAGGAGGACTCCAAGGAGCTGCGCGCCCT...CTCGGCCTTGCACCGGGACGCCGAGTTTGGGACACCGAACACTGGGCAAAAGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS CCA 90 bp GCACCCGCGGCGGGTTGTAGTCCAGCTCCAGGTCGGCCTGGGACATaGGGCGCTCCATGGGGTCTAAAGGCACGGAGGAGAAGCGGTTCA +
Preference number: 5 (lower is better)
Translates to: APAAGCSPAPGRPGT*GAPWGLKARRRSGS
Trigger: TGAACCGCTTCTCCTCCGTGCCTTTAGACCCCATGGAGCGCCCCATGTCCCAGGCCGACCTGGAGCTGGACTACAACCCGCCGCGGGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000533564.1
ENST00000610924.1
CDS CCA 90 bp GGCAGGGCGGCCTGCTGCGCGCAGCGAGGGGTGCTGTACAAGTTGTaGAGCCTCGGGAAGGGTTCGGCTGTGCCCCTCAATGTGAGTTGC +
Preference number: 5 (lower is better)
Translates to: GRAACCAQRGVLYKL*SLGKGSAVPLNVSC
Trigger: GCAACTCACATTGAGGGGCACAGCCGAACCCTTCCCGAGGCTCCACAACTTGTACAGCACCCCTCGCTGCGCGCAGCAGGCCGCCCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533564.1
CDS-3UTR CAA 90 bp CTTTTGCCCAGTGTTCGGTGTCCCAAACTCGGCGTCCCGGTGCAAGGCCGAGGCTCCTCGCGCAGGGCCTaGTTCTCCTCCCGCAGAGAC +
Preference number: 5 (lower is better)
Translates to: LLPSVRCPKLGVPVQGRGSSRRA*FSSRRD
Trigger: GTCTCTGCGGGAGGAGAACAAGGCCCTGCGCGAGGA...GCCTCGGCCTTGCACCGGGACGCCGAGTTTGGGACACCGAACACTGGGCAAAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CAA 90 bp GATTCTCTTTTGCCCAGTGTTCGGTGTCCCAAACTCGGCGTCCCGGTGCAAGGCGGTGAGGGGGCGGGCTaGCTTTCCTCGGCAGGGGCG +
Preference number: 5 (lower is better)
Translates to: DSLLPSVRCPKLGVPVQGGEGAG*LSSAGA
Trigger: CGCCCCTGCCGAGGAAAGCAAGCCCGCCCCCTCACC...GCCTTGCACCGGGACGCCGAGTTTGGGACACCGAACACTGGGCAAAAGAGAATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CAA 90 bp GGATTCTCTTTTGCCCAGTGTTCGGTGTCCCAAACTCGGCGTCCCGGTGCAAGGAGGGCGCGCAGCTCCTaGGAGTCCTCCTGCCGGGCC +
Preference number: 5 (lower is better)
Translates to: GFSFAQCSVSQTRRPGARRARSS*ESSCRA
Trigger: GGCCCGGCAGGAGGACTCCAAGGAGCTGCGCGCCCT...CCTTGCACCGGGACGCCGAGTTTGGGACACCGAACACTGGGCAAAAGAGAATCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CAA 90 bp TCAATAGGTACGAACTGGCTGGGGAAGGCGAGGACGACAAAGGAAGGCAGGGGAAGGCCCGGGCCCACCTaGGCCTCCTCCTCCCCGGAG +
Preference number: 5 (lower is better)
Translates to: SIGTNWLGKARTTKEGRGRPGPT*ASSSPE
Trigger: CTCCGGGGAGGAGGAGGCCAAGGTGGGCCCGGGCCT...TCCCCTGCCTTCCTTTGTCGTCCTCGCCTTCCCCAGCCAGTTCGTACCTATTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS GCA 90 bp AGTGGCGAGGGGGCCCGGCTCTCCTCTCGGCCCAGCGAGGCCTTGTaGTCCTCCCAGAAGACCTGTAGGATCTTGTTCTCCTTGCTGAGC +
Preference number: 5 (lower is better)
Translates to: SGEGARLSSRPSEAL*SSQKTCRILFSLLS
Trigger: GCTCAGCAAGGAGAACAAGATCCTACAGGTCTTCTGGGAGGAGCACAAGGCCTCGCTGGGCCGAGAGGAGAGCCGGGCCCCCTCGCCACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CAA 90 bp CTCTTTTGCCCAGTGTTCGGTGTCCCAAACTCGGCGTCCCGGTGCAAGGCCGAGTCCTCGCGCAGGGCCTaGTTCTCCTCCCGCAGAGAC +
Preference number: 5 (lower is better)
Translates to: LFCPVFGVPNSASRCKAESSRRA*FSSRRD
Trigger: GTCTCTGCGGGAGGAGAACAAGGCCCTGCGCGAGGA...CTCGGCCTTGCACCGGGACGCCGAGTTTGGGACACCGAACACTGGGCAAAAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CAA 90 bp GTACGAACTGGCTGGGGAAGGCGAGGACGACAAAGGAAGGCAGGGGATTCTCTTGGTGAGGGGGCGGGCTaGCTTTCCTCGGCAGGGGCG +
Preference number: 5 (lower is better)
Translates to: VRTGWGRRGRQRKAGDSLGEGAG*LSSAGA
Trigger: CGCCCCTGCCGAGGAAAGCAAGCCCGCCCCCTCACC...AAGAGAATCCCCTGCCTTCCTTTGTCGTCCTCGCCTTCCCCAGCCAGTTCGTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CAA 90 bp GGAAGGCGAGGACGACAAAGGAAGGCAGGGGATTCTCTTTTGCCCAGTGTTCGGCGGGCCGGAGGCCCTTaGGGCTCCTCGAAGCGGGAG +
Preference number: 5 (lower is better)
Translates to: GRRGRQRKAGDSLLPSVRRAGGP*GSSKRE
Trigger: CTCCCGCTTCGAGGAGCCCAAAGGGCCTCCGGCCCG...CCGAACACTGGGCAAAAGAGAATCCCCTGCCTTCCTTTGTCGTCCTCGCCTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CAA 90 bp GGAAGGCGAGGACGACAAAGGAAGGCAGGGGATTCTCTTTTGCCCAGTGTTCGGAGGGCGCGCAGCTCCTaGGAGTCCTCCTGCCGGGCC +
Preference number: 5 (lower is better)
Translates to: GRRGRQRKAGDSLLPSVRRARSS*ESSCRA
Trigger: GGCCCGGCAGGAGGACTCCAAGGAGCTGCGCGCCCT...CCGAACACTGGGCAAAAGAGAATCCCCTGCCTTCCTTTGTCGTCCTCGCCTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CAA 90 bp AGGCGAGGACGACAAAGGAAGGCAGGGGATTCTCTTTTGCCCAGTGTTCGGTGTAGGCCCGGGCCCACCTaGGCCTCCTCCTCCCCGGAG +
Preference number: 5 (lower is better)
Translates to: RRGRQRKAGDSLLPSVRCRPGPT*ASSSPE
Trigger: CTCCGGGGAGGAGGAGGCCAAGGTGGGCCCGGGCCT...ACACCGAACACTGGGCAAAAGAGAATCCCCTGCCTTCCTTTGTCGTCCTCGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS TCA 90 bp TCTCATTTACCCAGCGCCCGTCCTGGAACACGAACATCTCGTCGCTaGGCTGCACCCGCGGCGGGTTGTAGTCCAGCTCCAGGTCGGCCT +
Preference number: 5 (lower is better)
Translates to: SHLPSARPGTRTSRR*AAPAAGCSPAPGRP
Trigger: AGGCCGACCTGGAGCTGGACTACAACCCGCCGCGGGTGCAGCTCAGCGACGAGATGTTCGTGTTCCAGGACGGGCGCTGGGTAAATGAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000533564.1
ENST00000610924.1
CDS GCA 90 bp GCCTTGTTCTCCTCCTGGAAGCCCCTGTGCTCTGCCCGTAGCACCTaGAGGGTCCTGTTCTCCTCCTGCAGGAGCCGGTTCTCCTTGAGC +
Preference number: 5 (lower is better)
Translates to: ALFSSWKPLCSARST*RVLFSSCRSRFSLS
Trigger: GCTCAAGGAGAACCGGCTCCTGCAGGAGGAGAACAGGACCCTGCAGGTGCTACGGGCAGAGCACAGGGGCTTCCAGGAGGAGAACAAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CAA 90 bp GGCAGGGGATTCTCTTTTGCCCAGTGTTCGGTGTCCCAAACTCGGCGTCCCGGTAGGGACGCGCTGTCTTaGTGCAGCAGTGGCGAGGGG +
Preference number: 5 (lower is better)
Translates to: GRGFSFAQCSVSQTRRPGRDALS*CSSGEG
Trigger: CCCCTCGCCACTGCTGCACAAAGACAGCGCGTCCCT...ACCGGGACGCCGAGTTTGGGACACCGAACACTGGGCAAAAGAGAATCCCCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CAA 90 bp GGAAGGCTGCTAACGCTGCTTTTCAATAGGTACGAACTGGCTGGGGAAGGCGAGCGGGCCGGAGGCCCTTaGGGCTCCTCGAAGCGGGAG +
Preference number: 5 (lower is better)
Translates to: GRLLTLLFNRYELAGEGERAGGP*GSSKRE
Trigger: CTCCCGCTTCGAGGAGCCCAAAGGGCCTCCGGCCCG...CTCGCCTTCCCCAGCCAGTTCGTACCTATTGAAAAGCAGCGTTAGCAGCCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CAA 90 bp GGATTCTCTTTTGCCCAGTGTTCGGTGTCCCAAACTCGGCGTCCCGGTGCAAGGAGGAGCCGGTTCTCCTaGAGCAGGGCCTGCAGCGCC +
Preference number: 5 (lower is better)
Translates to: GFSFAQCSVSQTRRPGARRSRFS*SRACSA
Trigger: GGCGCTGCAGGCCCTGCTCAAGGAGAACCGGCTCCT...CCTTGCACCGGGACGCCGAGTTTGGGACACCGAACACTGGGCAAAAGAGAATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CAA 90 bp GGTACGAACTGGCTGGGGAAGGCGAGGACGACAAAGGAAGGCAGGGGATTCTCTAGGGACGCGCTGTCTTaGTGCAGCAGTGGCGAGGGG +
Preference number: 5 (lower is better)
Translates to: GTNWLGKARTTKEGRGFSRDALS*CSSGEG
Trigger: CCCCTCGCCACTGCTGCACAAAGACAGCGCGTCCCT...AGAGAATCCCCTGCCTTCCTTTGTCGTCCTCGCCTTCCCCAGCCAGTTCGTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CAA 90 bp ACAAAGGAAGGCAGGGGATTCTCTTTTGCCCAGTGTTCGGTGTCCCAAACTCGGGGTGAGGGGGCGGGCTaGCTTTCCTCGGCAGGGGCG +
Preference number: 5 (lower is better)
Translates to: TKEGRGFSFAQCSVSQTRGEGAG*LSSAGA
Trigger: CGCCCCTGCCGAGGAAAGCAAGCCCGCCCCCTCACC...CCGAGTTTGGGACACCGAACACTGGGCAAAAGAGAATCCCCTGCCTTCCTTTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CAA 90 bp CTTTTGCCCAGTGTTCGGTGTCCCAAACTCGGCGTCCCGGTGCAAGGCCGAGGCGCAGGGGATTCTCTTTaGCCCAGTGTTCGGTGTCCC +
Preference number: 5 (lower is better)
Translates to: LLPSVRCPKLGVPVQGRGAGDSL*PSVRCP
Trigger: GGGACACCGAACACTGGGCAAAAGAGAATCCCCTGC...GCCTCGGCCTTGCACCGGGACGCCGAGTTTGGGACACCGAACACTGGGCAAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS GCA 90 bp ATTCTCTTTTGCCCAGTGTTCGGTGTCCCAAACTCGGCGTCCCGGTaGAAGGCCGAGGCCTCAGACCCTGCTAGGCTTCTTGGGGTCCTG +
Preference number: 5 (lower is better)
Translates to: ILFCPVFGVPNSASR*KAEASDPARLLGVL
Trigger: CAGGACCCCAAGAAGCCTAGCAGGGTCTGAGGCCTCGGCCTTGCACCGGGACGCCGAGTTTGGGACACCGAACACTGGGCAAAAGAGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS CCA 90 bp GGTTGTAGTCCAGCTCCAGGTCGGCCTGGGACATGGGGCGCTCCATaGGGTCTAAAGGCACGGAGGAGAAGCGGTTCAGTGGATAGGAGT +
Preference number: 5 (lower is better)
Translates to: GCSPAPGRPGTWGAP*GLKARRRSGSVDRS
Trigger: ACTCCTATCCACTGAACCGCTTCTCCTCCGTGCCTTTAGACCCCATGGAGCGCCCCATGTCCCAGGCCGACCTGGAGCTGGACTACAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000533564.1
ENST00000610924.1
CDS-3UTR CAA 90 bp CTCTTTTGCCCAGTGTTCGGTGTCCCAAACTCGGCGTCCCGGTGCAAGGCCGAGTCCTCCCGCAGAGACTaGTTCTCCTCCTGCAGCATG +
Preference number: 5 (lower is better)
Translates to: LFCPVFGVPNSASRCKAESSRRD*FSSCSM
Trigger: CATGCTGCAGGAGGAGAACAAGTCTCTGCGGGAGGA...CTCGGCCTTGCACCGGGACGCCGAGTTTGGGACACCGAACACTGGGCAAAAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CAA 90 bp GGAAGGCGAGGACGACAAAGGAAGGCAGGGGATTCTCTTTTGCCCAGTGTTCGGTCCTCGCGCAGGGCCTaGTTCTCCTCCCGCAGAGAC +
Preference number: 5 (lower is better)
Translates to: GRRGRQRKAGDSLLPSVRSSRRA*FSSRRD
Trigger: GTCTCTGCGGGAGGAGAACAAGGCCCTGCGCGAGGA...CCGAACACTGGGCAAAAGAGAATCCCCTGCCTTCCTTTGTCGTCCTCGCCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CAA 90 bp TCAATAGGTACGAACTGGCTGGGGAAGGCGAGGACGACAAAGGAAGGCAGGGGAAGGGACGCGCTGTCTTaGTGCAGCAGTGGCGAGGGG +
Preference number: 5 (lower is better)
Translates to: SIGTNWLGKARTTKEGRGRDALS*CSSGEG
Trigger: CCCCTCGCCACTGCTGCACAAAGACAGCGCGTCCCT...TCCCCTGCCTTCCTTTGTCGTCCTCGCCTTCCCCAGCCAGTTCGTACCTATTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CAA 90 bp AGGTACGAACTGGCTGGGGAAGGCGAGGACGACAAAGGAAGGCAGGGGATTCTCGAGGGCCCGGACATGTaGCTGACCATCTTCCGCAGG +
Preference number: 5 (lower is better)
Translates to: RYELAGEGEDDKGRQGILEGPDM*LTIFRR
Trigger: CCTGCGGAAGATGGTCAGCAACATGTCCGGGCCCTC...GAGAATCCCCTGCCTTCCTTTGTCGTCCTCGCCTTCCCCAGCCAGTTCGTACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CAA 90 bp AATAGGTACGAACTGGCTGGGGAAGGCGAGGACGACAAAGGAAGGCAGGGGATTAGGAGCCGGTTCTCCTaGAGCAGGGCCTGCAGCGCC +
Preference number: 5 (lower is better)
Translates to: NRYELAGEGEDDKGRQGIRSRFS*SRACSA
Trigger: GGCGCTGCAGGCCCTGCTCAAGGAGAACCGGCTCCT...AATCCCCTGCCTTCCTTTGTCGTCCTCGCCTTCCCCAGCCAGTTCGTACCTATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CAA 90 bp GAAGGCAGGGGATTCTCTTTTGCCCAGTGTTCGGTGTCCCAAACTCGGCGTCCCTGCAGCATGCACTCCTaGGCCAGCCTCTTGTGGTGC +
Preference number: 5 (lower is better)
Translates to: EGRGFSFAQCSVSQTRRPCSMHS*ASLLWC
Trigger: GCACCACAAGAGGCTGGCCAAGGAGTGCATGCTGCA...GGGACGCCGAGTTTGGGACACCGAACACTGGGCAAAAGAGAATCCCCTGCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CAA 90 bp ACAAAGGAAGGCAGGGGATTCTCTTTTGCCCAGTGTTCGGTGTCCCAAACTCGGAGGAGCCGGTTCTCCTaGAGCAGGGCCTGCAGCGCC +
Preference number: 5 (lower is better)
Translates to: TKEGRGFSFAQCSVSQTRRSRFS*SRACSA
Trigger: GGCGCTGCAGGCCCTGCTCAAGGAGAACCGGCTCCT...CCGAGTTTGGGACACCGAACACTGGGCAAAAGAGAATCCCCTGCCTTCCTTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CAA 90 bp TCAATAGGTACGAACTGGCTGGGGAAGGCGAGGACGACAAAGGAAGGCAGGGGAGGGGTGCTGTACAAGTaGTGGAGCCTCGGGAAGGGT +
Preference number: 5 (lower is better)
Translates to: SIGTNWLGKARTTKEGRGGVLYK*WSLGKG
Trigger: ACCCTTCCCGAGGCTCCACAACTTGTACAGCACCCC...TCCCCTGCCTTCCTTTGTCGTCCTCGCCTTCCCCAGCCAGTTCGTACCTATTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CAA 90 bp AAAGGAAGGCAGGGGATTCTCTTTTGCCCAGTGTTCGGTGTCCCAAACTCGGCGGAGGGCCCGGACATGTaGCTGACCATCTTCCGCAGG +
Preference number: 5 (lower is better)
Translates to: KGRQGILFCPVFGVPNSAEGPDM*LTIFRR
Trigger: CCTGCGGAAGATGGTCAGCAACATGTCCGGGCCCTC...CGCCGAGTTTGGGACACCGAACACTGGGCAAAAGAGAATCCCCTGCCTTCCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CAA 90 bp AGGTACGAACTGGCTGGGGAAGGCGAGGACGACAAAGGAAGGCAGGGGATTCTCGCAGGGGATTCTCTTTaGCCCAGTGTTCGGTGTCCC +
Preference number: 5 (lower is better)
Translates to: RYELAGEGEDDKGRQGILAGDSL*PSVRCP
Trigger: GGGACACCGAACACTGGGCAAAAGAGAATCCCCTGC...GAGAATCCCCTGCCTTCCTTTGTCGTCCTCGCCTTCCCCAGCCAGTTCGTACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CAA 90 bp AAGGAAGGCAGGGGATTCTCTTTTGCCCAGTGTTCGGTGTCCCAAACTCGGCGTGGGGTGCTGTACAAGTaGTGGAGCCTCGGGAAGGGT +
Preference number: 5 (lower is better)
Translates to: KEGRGFSFAQCSVSQTRRGVLYK*WSLGKG
Trigger: ACCCTTCCCGAGGCTCCACAACTTGTACAGCACCCC...ACGCCGAGTTTGGGACACCGAACACTGGGCAAAAGAGAATCCCCTGCCTTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CAA 90 bp AAAGGAAGGCAGGGGATTCTCTTTTGCCCAGTGTTCGGTGTCCCAAACTCGGCGTCCTTGGCCAGCCTCTaGTGGTGCAGCTTGTGGTGG +
Preference number: 5 (lower is better)
Translates to: KGRQGILFCPVFGVPNSASLASL*WCSLWW
Trigger: CCACCACAAGCTGCACCACAAGAGGCTGGCCAAGGA...CGCCGAGTTTGGGACACCGAACACTGGGCAAAAGAGAATCCCCTGCCTTCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CAA 90 bp ACAAAGGAAGGCAGGGGATTCTCTTTTGCCCAGTGTTCGGTGTCCCAAACTCGGTGCAGCATGCACTCCTaGGCCAGCCTCTTGTGGTGC +
Preference number: 5 (lower is better)
Translates to: TKEGRGFSFAQCSVSQTRCSMHS*ASLLWC
Trigger: GCACCACAAGAGGCTGGCCAAGGAGTGCATGCTGCA...CCGAGTTTGGGACACCGAACACTGGGCAAAAGAGAATCCCCTGCCTTCCTTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CAA 90 bp AAGGAAGGCAGGGGATTCTCTTTTGCCCAGTGTTCGGTGTCCCAAACTCGGCGTTCCTCCCGCAGAGACTaGTTCTCCTCCTGCAGCATG +
Preference number: 5 (lower is better)
Translates to: KEGRGFSFAQCSVSQTRRSSRRD*FSSCSM
Trigger: CATGCTGCAGGAGGAGAACAAGTCTCTGCGGGAGGA...ACGCCGAGTTTGGGACACCGAACACTGGGCAAAAGAGAATCCCCTGCCTTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CAA 90 bp GATTCTCTTTTGCCCAGTGTTCGGTGTCCCAAACTCGGCGTCCCGGTGCAAGGCAGGATCTTGTTCTCCTaGCTGAGCATCCGGTTCTCC +
Preference number: 5 (lower is better)
Translates to: DSLLPSVRCPKLGVPVQGRILFS*LSIRFS
Trigger: GGAGAACCGGATGCTCAGCAAGGAGAACAAGATCCT...GCCTTGCACCGGGACGCCGAGTTTGGGACACCGAACACTGGGCAAAAGAGAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CAA 90 bp CTAACGCTGCTTTTCAATAGGTACGAACTGGCTGGGGAAGGCGAGGACGACAAAGAGGGCCCGGACATGTaGCTGACCATCTTCCGCAGG +
Preference number: 5 (lower is better)
Translates to: LTLLFNRYELAGEGEDDKEGPDM*LTIFRR
Trigger: CCTGCGGAAGATGGTCAGCAACATGTCCGGGCCCTC...TTTGTCGTCCTCGCCTTCCCCAGCCAGTTCGTACCTATTGAAAAGCAGCGTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CAA 90 bp CTAACGCTGCTTTTCAATAGGTACGAACTGGCTGGGGAAGGCGAGGACGACAAATCCTTGGCCAGCCTCTaGTGGTGCAGCTTGTGGTGG +
Preference number: 5 (lower is better)
Translates to: LTLLFNRYELAGEGEDDKSLASL*WCSLWW
Trigger: CCACCACAAGCTGCACCACAAGAGGCTGGCCAAGGA...TTTGTCGTCCTCGCCTTCCCCAGCCAGTTCGTACCTATTGAAAAGCAGCGTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CAA 90 bp TCAATAGGTACGAACTGGCTGGGGAAGGCGAGGACGACAAAGGAAGGCAGGGGAGTGCCCCTCTCTGCATaGGATTCCTCCATCCTACAT +
Preference number: 5 (lower is better)
Translates to: SIGTNWLGKARTTKEGRGVPLSA*DSSILH
Trigger: ATGTAGGATGGAGGAATCCAATGCAGAGAGGGGCAC...TCCCCTGCCTTCCTTTGTCGTCCTCGCCTTCCCCAGCCAGTTCGTACCTATTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CAA 90 bp CTAACGCTGCTTTTCAATAGGTACGAACTGGCTGGGGAAGGCGAGGACGACAAATCCTCCCGCAGAGACTaGTTCTCCTCCTGCAGCATG +
Preference number: 5 (lower is better)
Translates to: LTLLFNRYELAGEGEDDKSSRRD*FSSCSM
Trigger: CATGCTGCAGGAGGAGAACAAGTCTCTGCGGGAGGA...TTTGTCGTCCTCGCCTTCCCCAGCCAGTTCGTACCTATTGAAAAGCAGCGTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CAA 90 bp AATAGGTACGAACTGGCTGGGGAAGGCGAGGACGACAAAGGAAGGCAGGGGATTAGGATCTTGTTCTCCTaGCTGAGCATCCGGTTCTCC +
Preference number: 5 (lower is better)
Translates to: NRYELAGEGEDDKGRQGIRILFS*LSIRFS
Trigger: GGAGAACCGGATGCTCAGCAAGGAGAACAAGATCCT...AATCCCCTGCCTTCCTTTGTCGTCCTCGCCTTCCCCAGCCAGTTCGTACCTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CAA 90 bp AAGGAAGGCAGGGGATTCTCTTTTGCCCAGTGTTCGGTGTCCCAAACTCGGCGTGTGCCCCTCTCTGCATaGGATTCCTCCATCCTACAT +
Preference number: 5 (lower is better)
Translates to: KEGRGFSFAQCSVSQTRRVPLSA*DSSILH
Trigger: ATGTAGGATGGAGGAATCCAATGCAGAGAGGGGCAC...ACGCCGAGTTTGGGACACCGAACACTGGGCAAAAGAGAATCCCCTGCCTTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CAA 90 bp AGTTTAGGAAGGCTGCTAACGCTGCTTTTCAATAGGTACGAACTGGCTGGGGAATGCAGCATGCACTCCTaGGCCAGCCTCTTGTGGTGC +
Preference number: 5 (lower is better)
Translates to: SLGRLLTLLFNRYELAGECSMHS*ASLLWC
Trigger: GCACCACAAGAGGCTGGCCAAGGAGTGCATGCTGCA...TTCCCCAGCCAGTTCGTACCTATTGAAAAGCAGCGTTAGCAGCCTTCCTAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CAA 90 bp TCAATAGGTACGAACTGGCTGGGGAAGGCGAGGACGACAAAGGAAGGCAGGGGAAAGACCTGTAGGATCTaGTTCTCCTTGCTGAGCATC +
Preference number: 5 (lower is better)
Translates to: SIGTNWLGKARTTKEGRGKTCRI*FSLLSI
Trigger: GATGCTCAGCAAGGAGAACAAGATCCTACAGGTCTT...TCCCCTGCCTTCCTTTGTCGTCCTCGCCTTCCCCAGCCAGTTCGTACCTATTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CAA 90 bp GGTACGAACTGGCTGGGGAAGGCGAGGACGACAAAGGAAGGCAGGGGATTCTCTCCAAAAGATCTCGTTTaGAGAAGGCTGGGTTACTTC +
Preference number: 5 (lower is better)
Translates to: GTNWLGKARTTKEGRGFSPKDLV*RRLGYF
Trigger: GAAGTAACCCAGCCTTCTCAAAACGAGATCTTTTGG...AGAGAATCCCCTGCCTTCCTTTGTCGTCCTCGCCTTCCCCAGCCAGTTCGTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000378966.3
CDS CCA 90 bp CTGCATTGGATTCCTCCATCCTACATTTCAACCCCTCTGGTTGCATaGCCCTGGTCTTCCAATGAGGACTTAGGTGACTCTGCTTCCCTG +
Preference number: 5 (lower is better)
Translates to: LHWIPPSYISTPLVA*PWSSNEDLGDSASL
Trigger: CAGGGAAGCAGAGTCACCTAAGTCCTCATTGGAAGACCAGGGCCATGCAACCAGAGGGGTTGAAATGTAGGATGGAGGAATCCAATGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610924.1
CDS-3UTR CAA 90 bp AAAGGAAGGCAGGGGATTCTCTTTTGCCCAGTGTTCGGTGTCCCAAACTCGGCGAAGACCTGTAGGATCTaGTTCTCCTTGCTGAGCATC +
Preference number: 5 (lower is better)
Translates to: KGRQGILFCPVFGVPNSAKTCRI*FSLLSI
Trigger: GATGCTCAGCAAGGAGAACAAGATCCTACAGGTCTT...CGCCGAGTTTGGGACACCGAACACTGGGCAAAAGAGAATCCCCTGCCTTCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CAA 90 bp AGTTTAGGAAGGCTGCTAACGCTGCTTTTCAATAGGTACGAACTGGCTGGGGAAGCAGGGGATTCTCTTTaGCCCAGTGTTCGGTGTCCC +
Preference number: 5 (lower is better)
Translates to: SLGRLLTLLFNRYELAGEAGDSL*PSVRCP
Trigger: GGGACACCGAACACTGGGCAAAAGAGAATCCCCTGC...TTCCCCAGCCAGTTCGTACCTATTGAAAAGCAGCGTTAGCAGCCTTCCTAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CAA 90 bp AGGTACGAACTGGCTGGGGAAGGCGAGGACGACAAAGGAAGGCAGGGGATTCTCCAGGGCTTAATTCTCTaGACAGCTCCAAATAACTCT +
Preference number: 5 (lower is better)
Translates to: RYELAGEGEDDKGRQGILQGLIL*TAPNNS
Trigger: AGAGTTATTTGGAGCTGTCAAGAGAATTAAGCCCTG...GAGAATCCCCTGCCTTCCTTTGTCGTCCTCGCCTTCCCCAGCCAGTTCGTACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378966.3
CDS CCA 90 bp TGGATTCCTCCATCCTACATTTCAACCCCTCTGGTTGCATGGCCCTaGTCTTCCAATGAGGACTTAGGTGACTCTGCTTCCCTGTCTAAG +
Preference number: 5 (lower is better)
Translates to: WIPPSYISTPLVAWP*SSNEDLGDSASLSK
Trigger: CTTAGACAGGGAAGCAGAGTCACCTAAGTCCTCATTGGAAGACCAGGGCCATGCAACCAGAGGGGTTGAAATGTAGGATGGAGGAATCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610924.1
CDS-3UTR CAA 90 bp CTAACGCTGCTTTTCAATAGGTACGAACTGGCTGGGGAAGGCGAGGACGACAAAGGTCCTATGCAGAAGTaGGTCACCAAAACACTCAGA +
Preference number: 5 (lower is better)
Translates to: LTLLFNRYELAGEGEDDKGPMQK*VTKTLR
Trigger: TCTGAGTGTTTTGGTGACCAACTTCTGCATAGGACC...TTTGTCGTCCTCGCCTTCCCCAGCCAGTTCGTACCTATTGAAAAGCAGCGTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310521.6
CDS TCA 90 bp GAGGACTCCACTAAGGAAACAGCTGATTGCAGGCAGGAGGAGACCTaGGACTCTATAGCCTGTGAGGACTTCACCAATTCATTGACTGAA +
Preference number: 5 (lower is better)
Translates to: EDSTKETADCRQEET*DSIACEDFTNSLTE
Trigger: TTCAGTCAATGAATTGGTGAAGTCCTCACAGGCTATAGAGTCTCAGGTCTCCTCCTGCCTGCAATCAGCTGTTTCCTTAGTGGAGTCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378966.3
CDS-3UTR CAA 90 bp ATTAAAACTCTGAGTTTAGGAAGGCTGCTAACGCTGCTTTTCAATAGGTACGAAAGGATCTTGTTCTCCTaGCTGAGCATCCGGTTCTCC +
Preference number: 5 (lower is better)
Translates to: IKTLSLGRLLTLLFNRYERILFS*LSIRFS
Trigger: GGAGAACCGGATGCTCAGCAAGGAGAACAAGATCCT...TTCGTACCTATTGAAAAGCAGCGTTAGCAGCCTTCCTAAACTCAGAGTTTTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS-3UTR CAA 90 bp ATTAAAACTCTGAGTTTAGGAAGGCTGCTAACGCTGCTTTTCAATAGGTACGAAAAGACCTGTAGGATCTaGTTCTCCTTGCTGAGCATC +
Preference number: 5 (lower is better)
Translates to: IKTLSLGRLLTLLFNRYEKTCRI*FSLLSI
Trigger: GATGCTCAGCAAGGAGAACAAGATCCTACAGGTCTT...TTCGTACCTATTGAAAAGCAGCGTTAGCAGCCTTCCTAAACTCAGAGTTTTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS GCA 72 bp GCCGGGGCAGGGCGGCCTGCTGCGCGCAGCGAGGGGTaGTGTACAAGTTGTGGAGCCTCGGGAAGGGTTCGG +
Preference number: 6 (lower is better)
Translates to: AGAGRPAARSEG*CTSCGASGRVR
Trigger: CCGAACCCTTCCCGAGGCTCCACAACTTGTACAGCACCCCTCGCTGCGCGCAGCAGGCCGCCCTGCCCCGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000533564.1
ENST00000610924.1
CDS GCA 72 bp GCCATCCTGCGGCTCAGCCGGGGCAGGGCGGCCTGCTaGGCGCAGCGAGGGGTGCTGTACAAGTTGTGGAGC +
Preference number: 6 (lower is better)
Translates to: AILRLSRGRAAC*AQRGVLYKLWS
Trigger: GCTCCACAACTTGTACAGCACCCCTCGCTGCGCGCAGCAGGCCGCCCTGCCCCGGCTGAGCCGCAGGATGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000533564.1
ENST00000610924.1
CDS GCA 72 bp AGCGGTTCAGTGGATAGGAGTGCTGGCTCGCCATCCTaGGGCTCAGCCGGGGCAGGGCGGCCTGCTGCGCGC +
Preference number: 6 (lower is better)
Translates to: SGSVDRSAGSPS*GSAGAGRPAAR
Trigger: GCGCGCAGCAGGCCGCCCTGCCCCGGCTGAGCCGCAGGATGGCGAGCCAGCACTCCTATCCACTGAACCGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000533564.1
ENST00000610924.1
CDS CCA 72 bp CACCACCTCCAGGGACGCGCTGTCTTTGTGCAGCAGTaGCGAGGGGGCCCGGCTCTCCTCTCGGCCCAGCGA +
Preference number: 6 (lower is better)
Translates to: HHLQGRAVFVQQ*RGGPALLSAQR
Trigger: TCGCTGGGCCGAGAGGAGAGCCGGGCCCCCTCGCCACTGCTGCACAAAGACAGCGCGTCCCTGGAGGTGGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS CAA 90 bp AGGGCGACGTGGTCCTTCTTCACCACCTCCAGGGACGCGCTGTCTTaGTGCAGCAGTGGCGAGGGGGCCCGGCTCTCCTCTCGGCCCAGC +
Preference number: 6 (lower is better)
Translates to: RATWSFFTTSRDALS*CSSGEGARLSSRPS
Trigger: GCTGGGCCGAGAGGAGAGCCGGGCCCCCTCGCCACTGCTGCACAAAGACAGCGCGTCCCTGGAGGTGGTGAAGAAGGACCACGTCGCCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS CAA 72 bp GCGGCCTGCTGCGCGCAGCGAGGGGTGCTGTACAAGTaGTGGAGCCTCGGGAAGGGTTCGGCTGTGCCCCTC +
Preference number: 6 (lower is better)
Translates to: AACCAQRGVLYK*WSLGKGSAVPL
Trigger: GAGGGGCACAGCCGAACCCTTCCCGAGGCTCCACAACTTGTACAGCACCCCTCGCTGCGCGCAGCAGGCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000533564.1
ENST00000610924.1
CDS TCA 72 bp TGGCCTCCTCCTCCCCGGAGGGCCCGGACATGTTGCTaGCCATCTTCCGCAGGGCGCGCAGCTCCTTGGAGT +
Preference number: 6 (lower is better)
Translates to: WPPPPRRARTCC*PSSAGRAAPWS
Trigger: ACTCCAAGGAGCTGCGCGCCCTGCGGAAGATGGTCAGCAACATGTCCGGGCCCTCCGGGGAGGAGGAGGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS CAA 72 bp ACCTTGGCCTCCTCCTCCCCGGAGGGCCCGGACATGTaGCTGACCATCTTCCGCAGGGCGCGCAGCTCCTTG +
Preference number: 6 (lower is better)
Translates to: TLASSSPEGPDM*LTIFRRARSSL
Trigger: CAAGGAGCTGCGCGCCCTGCGGAAGATGGTCAGCAACATGTCCGGGCCCTCCGGGGAGGAGGAGGCCAAGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS TCA 72 bp CCCAGCGCCCGTCCTGGAACACGAACATCTCGTCGCTaGGCTGCACCCGCGGCGGGTTGTAGTCCAGCTCCA +
Preference number: 6 (lower is better)
Translates to: PSARPGTRTSRR*AAPAAGCSPAP
Trigger: TGGAGCTGGACTACAACCCGCCGCGGGTGCAGCTCAGCGACGAGATGTTCGTGTTCCAGGACGGGCGCTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000533564.1
ENST00000610924.1
CDS GCA 72 bp TCCTTCTTCACCACCTCCAGGGACGCGCTGTCTTTGTaGAGCAGTGGCGAGGGGGCCCGGCTCTCCTCTCGG +
Preference number: 6 (lower is better)
Translates to: SFFTTSRDALSL*SSGEGARLSSR
Trigger: CCGAGAGGAGAGCCGGGCCCCCTCGCCACTGCTGCACAAAGACAGCGCGTCCCTGGAGGTGGTGAAGAAGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS GCA 72 bp AGCTGCAGGGTGCTGTCCTCCTTGCCACGGGGCACCTaGAGGGCGACGTGGTCCTTCTTCACCACCTCCAGG +
Preference number: 6 (lower is better)
Translates to: SCRVLSSLPRGT*RATWSFFTTSR
Trigger: CCTGGAGGTGGTGAAGAAGGACCACGTCGCCCTGCAGGTGCCCCGTGGCAAGGAGGACAGCACCCTGCAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS GCA 72 bp TCCTCCTGGAAGCCCCTGTGCTCTGCCCGTAGCACCTaGAGGGTCCTGTTCTCCTCCTGCAGGAGCCGGTTC +
Preference number: 6 (lower is better)
Translates to: SSWKPLCSARST*RVLFSSCRSRF
Trigger: GAACCGGCTCCTGCAGGAGGAGAACAGGACCCTGCAGGTGCTACGGGCAGAGCACAGGGGCTTCCAGGAGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS CCA 72 bp CCAGCTCCAGGTCGGCCTGGGACATGGGGCGCTCCATaGGGTCTAAAGGCACGGAGGAGAAGCGGTTCAGTG +
Preference number: 6 (lower is better)
Translates to: PAPGRPGTWGAP*GLKARRRSGSV
Trigger: CACTGAACCGCTTCTCCTCCGTGCCTTTAGACCCCATGGAGCGCCCCATGTCCCAGGCCGACCTGGAGCTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000533564.1
ENST00000610924.1
CDS CCA 72 bp GCGGGTTGTAGTCCAGCTCCAGGTCGGCCTGGGACATaGGGCGCTCCATGGGGTCTAAAGGCACGGAGGAGA +
Preference number: 6 (lower is better)
Translates to: AGCSPAPGRPGT*GAPWGLKARRR
Trigger: TCTCCTCCGTGCCTTTAGACCCCATGGAGCGCCCCATGTCCCAGGCCGACCTGGAGCTGGACTACAACCCGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000533564.1
ENST00000610924.1
CDS CCA 72 bp GCCTGCTGCGCGCAGCGAGGGGTGCTGTACAAGTTGTaGAGCCTCGGGAAGGGTTCGGCTGTGCCCCTCAAT +
Preference number: 6 (lower is better)
Translates to: ACCAQRGVLYKL*SLGKGSAVPLN
Trigger: ATTGAGGGGCACAGCCGAACCCTTCCCGAGGCTCCACAACTTGTACAGCACCCCTCGCTGCGCGCAGCAGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533564.1
CDS CAA 72 bp TGGTCCTTCTTCACCACCTCCAGGGACGCGCTGTCTTaGTGCAGCAGTGGCGAGGGGGCCCGGCTCTCCTCT +
Preference number: 6 (lower is better)
Translates to: WSFFTTSRDALS*CSSGEGARLSS
Trigger: AGAGGAGAGCCGGGCCCCCTCGCCACTGCTGCACAAAGACAGCGCGTCCCTGGAGGTGGTGAAGAAGGACCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS GCA 72 bp TGCCCAGTGTTCGGTGTCCCAAACTCGGCGTCCCGGTaGAAGGCCGAGGCCTCAGACCCTGCTAGGCTTCTT +
Preference number: 6 (lower is better)
Translates to: CPVFGVPNSASR*KAEASDPARLL
Trigger: AAGAAGCCTAGCAGGGTCTGAGGCCTCGGCCTTGCACCGGGACGCCGAGTTTGGGACACCGAACACTGGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000610924.1
CDS CCA 72 bp TGCAGGCGGCAGTTCTCATTTACCCAGCGCCCGTCCTaGAACACGAACATCTCGTCGCTGAGCTGCACCCGC +
Preference number: 6 (lower is better)
Translates to: CRRQFSFTQRPS*NTNISSLSCTR
Trigger: GCGGGTGCAGCTCAGCGACGAGATGTTCGTGTTCCAGGACGGGCGCTGGGTAAATGAGAACTGCCGCCTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000533564.1
ENST00000610924.1
CDS GCA 72 bp TCCTGCAGCATGCACTCCTTGGCCAGCCTCTTGTGGTaGAGCTTGTGGTGGAAGGAGGCGGATGGGGAGAAG +
Preference number: 6 (lower is better)
Translates to: SCSMHSLASLLW*SLWWKEADGEK
Trigger: CTTCTCCCCATCCGCCTCCTTCCACCACAAGCTGCACCACAAGAGGCTGGCCAAGGAGTGCATGCTGCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310521.6
ENST00000378966.3
ENST00000533564.1
ENST00000610924.1
CDS CCA 72 bp CCATCCTACATTTCAACCCCTCTGGTTGCATGGCCCTaGTCTTCCAATGAGGACTTAGGTGACTCTGCTTCC +
Preference number: 6 (lower is better)
Translates to: PSYISTPLVAWP*SSNEDLGDSAS
Trigger: GGAAGCAGAGTCACCTAAGTCCTCATTGGAAGACCAGGGCCATGCAACCAGAGGGGTTGAAATGTAGGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610924.1
CDS TCA 72 bp AAAAGCATCTATGCCCATGGCCCCTACATCTGTCTTTaGTGCATAGCAGGGCTTAATTCTCTTGACAGCTCC +
Preference number: 6 (lower is better)
Translates to: KSIYAHGPYICL*CIAGLNSLDSS
Trigger: GGAGCTGTCAAGAGAATTAAGCCCTGCTATGCATCAAAGACAGATGTAGGGGCCATGGGCATAGATGCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378966.3
CDS TCA 72 bp CAGCTCCAAATAACTCTGTACCCCTTTGTCCACGGATaGGGTTTTCTTCTCATGGATTCATTCTTATGCATT +
Preference number: 6 (lower is better)
Translates to: QLQITLYPFVHG*GFLLMDSFLCI
Trigger: AATGCATAAGAATGAATCCATGAGAAGAAAACCTCATCCGTGGACAAAGGGGTACAGAGTTATTTGGAGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378966.3