RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CASP14 (Homo sapiens)

Ensembl gene IDs: ENSG00000105141

Ensembl transcript IDs: ENST00000427043.4, ENST00000598738.1

Found 236 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGGATACCAGGGAACGCTTGGAGGAGTAACCGGGAAGAAAAGCCCTaGGTTTTTAGTGACGCTGGATGTGCCCGTAGGTTACTTGAGCAG +
Preference number: 1 (lower is better)
Translates to: RIPGNAWRSNREEKP*VFSDAGCARRLLEQ
Trigger: CTGCTCAAGTAACCTACGGGCACATCCAGCGTCACTAAAAACTCAGGGCTTTTCTTCCCGGTTACTCCTCCAAGCGTTCCCTGGTATCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427043.4
3UTR CCA 90 bp AGGACCTGCATGAAGGGTGTGATGGAAAAGAAACTGGGTGCCATTTaGCCTTGGGAACAGAAGATCTTGGGGAGAGGTAAGAGCTGCCTC +
Preference number: 1 (lower is better)
Translates to: RTCMKGVMEKKLGAI*PWEQKILGRGKSCL
Trigger: GAGGCAGCTCTTACCTCTCCCCAAGATCTTCTGTTCCCAAGGCCAAATGGCACCCAGTTTCTTTTCCATCACACCCTTCATGCAGGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427043.4
3UTR TCA 90 bp GACTTGAGCCTGGACAGTAACATGTCAGGGAAGAGAAGACCGGCATaGAAGTTGTTTCAAAATCAGGCTGGACTGGGCATGGTGTCTGGT +
Preference number: 1 (lower is better)
Translates to: DLSLDSNMSGKRRPA*KLFQNQAGLGMVSG
Trigger: ACCAGACACCATGCCCAGTCCAGCCTGATTTTGAAACAACTTTCATGCCGGTCTTCTCTTCCCTGACATGTTACTGTCCAGGCTCAAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
3UTR CCA 90 bp GGAAGAGAAGACCGGCATGAAAGTTGTTTCAAAATCAGGCTGGACTaGGCATGGTGTCTGGTGGCATATGAAGGATGCAAGAAGAGAGGG +
Preference number: 1 (lower is better)
Translates to: GREDRHESCFKIRLD*AWCLVAYEGCKKRG
Trigger: CCCTCTCTTCTTGCATCCTTCATATGCCACCAGACACCATGCCCAGTCCAGCCTGATTTTGAAACAACTTTCATGCCGGTCTTCTCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
3UTR TCA 90 bp AAAGCAGAGAGGCAAGGGAGGAAGTTGGTTGCAAAGATGCAGATATaGGAAGCTGAGGACTTGAGCCTGGACAGTAACATGTCAGGGAAG +
Preference number: 1 (lower is better)
Translates to: KAERQGRKLVAKMQI*EAEDLSLDSNMSGK
Trigger: CTTCCCTGACATGTTACTGTCCAGGCTCAAGTCCTCAGCTTCTCATATCTGCATCTTTGCAACCAACTTCCTCCCTTGCCTCTCTGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427043.4
3UTR CCA 90 bp GAAGACCGGCATGAAAGTTGTTTCAAAATCAGGCTGGACTGGGCATaGTGTCTGGTGGCATATGAAGGATGCAAGAAGAGAGGGGTCATA +
Preference number: 1 (lower is better)
Translates to: EDRHESCFKIRLDWA*CLVAYEGCKKRGVI
Trigger: TATGACCCCTCTCTTCTTGCATCCTTCATATGCCACCAGACACCATGCCCAGTCCAGCCTGATTTTGAAACAACTTTCATGCCGGTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427043.4
3UTR CCA 90 bp GTCAGGGAAGAGAAGACCGGCATGAAAGTTGTTTCAAAATCAGGCTaGACTGGGCATGGTGTCTGGTGGCATATGAAGGATGCAAGAAGA +
Preference number: 1 (lower is better)
Translates to: VREEKTGMKVVSKSG*TGHGVWWHMKDARR
Trigger: TCTTCTTGCATCCTTCATATGCCACCAGACACCATGCCCAGTCCAGCCTGATTTTGAAACAACTTTCATGCCGGTCTTCTCTTCCCTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
3UTR TCA 90 bp GAGTGTTCCAGGGAGATCACTGTTATAGATGGTATGGAGGACACATaGAAAGTGGGATGGAAAAGCAGAGAGGCAAGGGAGGAAGTTGGT +
Preference number: 1 (lower is better)
Translates to: ECSREITVIDGMEDT*KVGWKSREAREEVG
Trigger: ACCAACTTCCTCCCTTGCCTCTCTGCTTTTCCATCCCACTTTTCATGTGTCCTCCATACCATCTATAACAGTGATCTCCCTGGAACACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
3UTR GCA 90 bp GATAGAAAGTCCAGCCTGAGGGAGGTGATGTTAATGTTGCCACCATaGCTTGTGCTAAGTTTTGGCTGGCTTGCTCTAATAAGGACAGGA +
Preference number: 1 (lower is better)
Translates to: DRKSSLREVMLMLPP*LVLSFGWLALIRTG
Trigger: TCCTGTCCTTATTAGAGCAAGCCAGCCAAAACTTAGCACAAGGCATGGTGGCAACATTAACATCACCTCCCTCAGGCTGGACTTTCTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
3UTR CCA 90 bp GACTTCCAGCCTGGTGCTGCAAGGTTACCTGGAGGTAACCTTGGCTaGTGGTTATTGAAAATTTCTAGAAACTTCCAGAAAGCTCCTACC +
Preference number: 1 (lower is better)
Translates to: DFQPGAARLPGGNLG*WLLKISRNFQKAPT
Trigger: GGTAGGAGCTTTCTGGAAGTTTCTAGAAATTTTCAATAACCACCAGCCAAGGTTACCTCCAGGTAACCTTGCAGCACCAGGCTGGAAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
3UTR CCA 90 bp TTCCAGCCTGGTGCTGCAAGGTTACCTGGAGGTAACCTTGGCTGGTaGTTATTGAAAATTTCTAGAAACTTCCAGAAAGCTCCTACCTTG +
Preference number: 1 (lower is better)
Translates to: FQPGAARLPGGNLGW*LLKISRNFQKAPTL
Trigger: CAAGGTAGGAGCTTTCTGGAAGTTTCTAGAAATTTTCAATAACCACCAGCCAAGGTTACCTCCAGGTAACCTTGCAGCACCAGGCTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
3UTR TCA 90 bp AACAGAAGATCTTGGGGAGAGGTAAGAGCTGCCTCTAAATTTCTGTaGGACAGAAAGAATGCTGGAAGGAAAGCTCCTCCTGGTCTTTCT +
Preference number: 1 (lower is better)
Translates to: NRRSWGEVRAASKFL*DRKNAGRKAPPGLS
Trigger: AGAAAGACCAGGAGGAGCTTTCCTTCCAGCATTCTTTCTGTCTCACAGAAATTTAGAGGCAGCTCTTACCTCTCCCCAAGATCTTCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
3UTR-3UTR CCA 90 bp GCCCTCCAGCTTGGGGGAAATGGTGATAGCAAAGGCTTAGAGGCAAGGGTGAGTAGGAAAGGTCAAAGCTaGGGATGGAGAGATACAGGC +
Preference number: 2 (lower is better)
Translates to: ALQLGGNGDSKGLEARVSRKGQS*GWRDTG
Trigger: GCCTGTATCTCTCCATCCCCAGCTTTGACCTTTCCT...ACTCACCCTTGCCTCTAAGCCTTTGCTATCACCATTTCCCCCAAGCTGGAGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427043.4
3UTR CAA 90 bp GCAGGAAAGGTCAAAGCTGGGGATGGAGAGATACAGGCTGTAGAGTaGGAAGATAGTGAAGCCGATCTGACTTCCAGCCTGGTGCTGCAA +
Preference number: 2 (lower is better)
Translates to: AGKVKAGDGEIQAVE*EDSEADLTSSLVLQ
Trigger: TTGCAGCACCAGGCTGGAAGTCAGATCGGCTTCACTATCTTCCAACTCTACAGCCTGTATCTCTCCATCCCCAGCTTTGACCTTTCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
3UTR-3UTR GCA 90 bp CGTAGGTTACTTGAGCAGGAAAGGTCAAAGCTGGGGATGGAGAGATACAGGCTGACTGGAAGTTGGGAATaGATTGGCCTCAGGAGGAGG +
Preference number: 2 (lower is better)
Translates to: RRLLEQERSKLGMERYRLTGSWE*IGLRRR
Trigger: CCTCCTCCTGAGGCCAATGCATTCCCAACTTCCAGT...CAGCCTGTATCTCTCCATCCCCAGCTTTGACCTTTCCTGCTCAAGTAACCTACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
3UTR-3UTR TCA 90 bp CGTAGGTTACTTGAGCAGGAAAGGTCAAAGCTGGGGATGGAGAGATACAGGCTGTATCTAGAGAGGCCATaGGCTAGGAAGAGAACGGAG +
Preference number: 2 (lower is better)
Translates to: RRLLEQERSKLGMERYRLYLERP*ARKRTE
Trigger: CTCCGTTCTCTTCCTAGCTCATGGCCTCTCTAGATA...CAGCCTGTATCTCTCCATCCCCAGCTTTGACCTTTCCTGCTCAAGTAACCTACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
3UTR-3UTR TCA 90 bp GCCCTCCAGCTTGGGGGAAATGGTGATAGCAAAGGCTTAGAGGCAAGGGTGAGTTATGTTGTGTCTTCTTaGGTGTTCCAGGGAGATCAC +
Preference number: 2 (lower is better)
Translates to: ALQLGGNGDSKGLEARVSYVVSS*VFQGDH
Trigger: GTGATCTCCCTGGAACACTCAAGAAGACACAACATA...ACTCACCCTTGCCTCTAAGCCTTTGCTATCACCATTTCCCCCAAGCTGGAGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427043.4
3UTR-3UTR GCA 90 bp CAGAGAGGCAAGGGAGGAAGTTGGTTGCAAAGATGCAGATATGAGAAGCTGAGGGTTAGGACACCAACTTaGCAGCCAAGGAGGAGTGGT +
Preference number: 2 (lower is better)
Translates to: QRGKGGSWLQRCRYEKLRVRTPT*QPRRSG
Trigger: ACCACTCCTCCTTGGCTGGCAAGTTGGTGTCCTAAC...CCTCAGCTTCTCATATCTGCATCTTTGCAACCAACTTCCTCCCTTGCCTCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427043.4
3UTR-3UTR GCA 90 bp CGTAGGTTACTTGAGCAGGAAAGGTCAAAGCTGGGGATGGAGAGATACAGGCTGGTGAGACAGAAAGAATaGTGGAAGGAAAGCTCCTCC +
Preference number: 2 (lower is better)
Translates to: RRLLEQERSKLGMERYRLVRQKE*WKESSS
Trigger: GGAGGAGCTTTCCTTCCAGCATTCTTTCTGTCTCAC...CAGCCTGTATCTCTCCATCCCCAGCTTTGACCTTTCCTGCTCAAGTAACCTACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
3UTR-3UTR CCA 90 bp CGTAGGTTACTTGAGCAGGAAAGGTCAAAGCTGGGGATGGAGAGATACAGGCTGGAAAGAACTGGAAGTTaGGAATGCATTGGCCTCAGG +
Preference number: 2 (lower is better)
Translates to: RRLLEQERSKLGMERYRLERTGS*ECIGLR
Trigger: CCTGAGGCCAATGCATTCCCAACTTCCAGTTCTTTC...CAGCCTGTATCTCTCCATCCCCAGCTTTGACCTTTCCTGCTCAAGTAACCTACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
3UTR-3UTR CCA 90 bp AAGACCGGCATGAAAGTTGTTTCAAAATCAGGCTGGACTGGGCATGGTGTCTGGGGATTTAGCAGGTTGTaGAAAAGAGGCTGGGCTGGA +
Preference number: 2 (lower is better)
Translates to: KTGMKVVSKSGWTGHGVWGFSRL*KRGWAG
Trigger: TCCAGCCCAGCCTCTTTTCCACAACCTGCTAAATCC...CCAGACACCATGCCCAGTCCAGCCTGATTTTGAAACAACTTTCATGCCGGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000427043.4
3UTR-3UTR CCA 90 bp AAGACCGGCATGAAAGTTGTTTCAAAATCAGGCTGGACTGGGCATGGTGTCTGGGGTCAAAGCTGGGGATaGAGAGATACAGGCTGTAGA +
Preference number: 2 (lower is better)
Translates to: KTGMKVVSKSGWTGHGVWGQSWG*RDTGCR
Trigger: TCTACAGCCTGTATCTCTCCATCCCCAGCTTTGACC...CCAGACACCATGCCCAGTCCAGCCTGATTTTGAAACAACTTTCATGCCGGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000427043.4
3UTR-3UTR CCA 90 bp CAGAGAGGCAAGGGAGGAAGTTGGTTGCAAAGATGCAGATATGAGAAGCTGAGGATACCAGGGAACGCTTaGAGGAGTAACCGGGAAGAA +
Preference number: 2 (lower is better)
Translates to: QRGKGGSWLQRCRYEKLRIPGNA*RSNREE
Trigger: TTCTTCCCGGTTACTCCTCCAAGCGTTCCCTGGTAT...CCTCAGCTTCTCATATCTGCATCTTTGCAACCAACTTCCTCCCTTGCCTCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427043.4
3UTR-3UTR TCA 90 bp GTAACATGTCAGGGAAGAGAAGACCGGCATGAAAGTTGTTTCAAAATCAGGCTGCCTCAGGAGGAGGTTTaGCCTCCAAGTGAGATGCAG +
Preference number: 2 (lower is better)
Translates to: VTCQGREDRHESCFKIRLPQEEV*PPSEMQ
Trigger: CTGCATCTCACTTGGAGGTCAAACCTCCTCCTGAGG...CAGCCTGATTTTGAAACAACTTTCATGCCGGTCTTCTCTTCCCTGACATGTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
3UTR-3UTR TCA 90 bp GCCCTCCAGCTTGGGGGAAATGGTGATAGCAAAGGCTTAGAGGCAAGGGTGAGTAAGAGAAGACCGGCATaGAAGTTGTTTCAAAATCAG +
Preference number: 2 (lower is better)
Translates to: ALQLGGNGDSKGLEARVSKRRPA*KLFQNQ
Trigger: CTGATTTTGAAACAACTTTCATGCCGGTCTTCTCTT...ACTCACCCTTGCCTCTAAGCCTTTGCTATCACCATTTCCCCCAAGCTGGAGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427043.4
3UTR-3UTR CCA 90 bp AAGACCGGCATGAAAGTTGTTTCAAAATCAGGCTGGACTGGGCATGGTGTCTGGAAACTGGGTGCCATTTaGCCTTGGGAACAGAAGATC +
Preference number: 2 (lower is better)
Translates to: KTGMKVVSKSGWTGHGVWKLGAI*PWEQKI
Trigger: GATCTTCTGTTCCCAAGGCCAAATGGCACCCAGTTT...CCAGACACCATGCCCAGTCCAGCCTGATTTTGAAACAACTTTCATGCCGGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
3UTR-3UTR CCA 90 bp GCCCTCCAGCTTGGGGGAAATGGTGATAGCAAAGGCTTAGAGGCAAGGGTGAGTAAGGAGGAGTGGTTTTaGAGAGAAAGAATGGTTCTT +
Preference number: 2 (lower is better)
Translates to: ALQLGGNGDSKGLEARVSKEEWF*RERMVL
Trigger: AAGAACCATTCTTTCTCTCCAAAACCACTCCTCCTT...ACTCACCCTTGCCTCTAAGCCTTTGCTATCACCATTTCCCCCAAGCTGGAGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427043.4
3UTR-3UTR CCA 90 bp CGTAGGTTACTTGAGCAGGAAAGGTCAAAGCTGGGGATGGAGAGATACAGGCTGATAGATGGATTTTCTTaGAGAGAGGGCAGAGTCCAG +
Preference number: 2 (lower is better)
Translates to: RRLLEQERSKLGMERYRLIDGFS*REGRVQ
Trigger: CTGGACTCTGCCCTCTCTCCAAGAAAATCCATCTAT...CAGCCTGTATCTCTCCATCCCCAGCTTTGACCTTTCCTGCTCAAGTAACCTACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427043.4
3UTR-3UTR CCA 90 bp TGTGCCCGTAGGTTACTTGAGCAGGAAAGGTCAAAGCTGGGGATGGAGAGATACCCTTGTGCTAAGTTTTaGCTGGCTTGCTCTAATAAG +
Preference number: 2 (lower is better)
Translates to: CARRLLEQERSKLGMERYPCAKF*LACSNK
Trigger: CTTATTAGAGCAAGCCAGCCAAAACTTAGCACAAGG...GTATCTCTCCATCCCCAGCTTTGACCTTTCCTGCTCAAGTAACCTACGGGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427043.4
3UTR-3UTR TCA 90 bp AAGACCGGCATGAAAGTTGTTTCAAAATCAGGCTGGACTGGGCATGGTGTCTGGGCCTCTAAATTTCTGTaGGACAGAAAGAATGCTGGA +
Preference number: 2 (lower is better)
Translates to: KTGMKVVSKSGWTGHGVWASKFL*DRKNAG
Trigger: TCCAGCATTCTTTCTGTCTCACAGAAATTTAGAGGC...CCAGACACCATGCCCAGTCCAGCCTGATTTTGAAACAACTTTCATGCCGGTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
3UTR-3UTR TCA 90 bp CATGAAAGTTGTTTCAAAATCAGGCTGGACTGGGCATGGTGTCTGGTGGCATATTTGACTGCAGAAATCTaGACCTGGGATCTGAGGTTG +
Preference number: 2 (lower is better)
Translates to: HESCFKIRLDWAWCLVAYLTAEI*TWDLRL
Trigger: CAACCTCAGATCCCAGGTTCAGATTTCTGCAGTCAA...ATATGCCACCAGACACCATGCCCAGTCCAGCCTGATTTTGAAACAACTTTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
3UTR-3UTR CCA 90 bp ACAGTAACATGTCAGGGAAGAGAAGACCGGCATGAAAGTTGTTTCAAAATCAGGGGGAACAGAAGATCTTaGGGAGAGGTAAGAGCTGCC +
Preference number: 2 (lower is better)
Translates to: TVTCQGREDRHESCFKIRGNRRS*GEVRAA
Trigger: GGCAGCTCTTACCTCTCCCCAAGATCTTCTGTTCCC...CCTGATTTTGAAACAACTTTCATGCCGGTCTTCTCTTCCCTGACATGTTACTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427043.4
3UTR-3UTR CCA 90 bp AAGACCGGCATGAAAGTTGTTTCAAAATCAGGCTGGACTGGGCATGGTGTCTGGGGGATGAGTGGGCTTTaGTTTGTCTATGGAAAATCT +
Preference number: 2 (lower is better)
Translates to: KTGMKVVSKSGWTGHGVWGMSGL*FVYGKS
Trigger: AGATTTTCCATAGACAAACCAAAGCCCACTCATCCC...CCAGACACCATGCCCAGTCCAGCCTGATTTTGAAACAACTTTCATGCCGGTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000427043.4
3UTR-3UTR TCA 90 bp CGTAGGTTACTTGAGCAGGAAAGGTCAAAGCTGGGGATGGAGAGATACAGGCTGTTGGCTGGTGGTTATTaGAAATTTCTAGAAACTTCC +
Preference number: 2 (lower is better)
Translates to: RRLLEQERSKLGMERYRLLAGGY*KFLETS
Trigger: GGAAGTTTCTAGAAATTTTCAATAACCACCAGCCAA...CAGCCTGTATCTCTCCATCCCCAGCTTTGACCTTTCCTGCTCAAGTAACCTACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
3UTR-3UTR GCA 90 bp GTAACATGTCAGGGAAGAGAAGACCGGCATGAAAGTTGTTTCAAAATCAGGCTGGGAAAAGAAACTGGGTaGCATTTGGCCTTGGGAACA +
Preference number: 2 (lower is better)
Translates to: VTCQGREDRHESCFKIRLGKETG*HLALGT
Trigger: TGTTCCCAAGGCCAAATGGCACCCAGTTTCTTTTCC...CAGCCTGATTTTGAAACAACTTTCATGCCGGTCTTCTCTTCCCTGACATGTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427043.4
3UTR-3UTR GCA 90 bp GGAGAGATACAGGCTGTAGAGTTGGAAGATAGTGAAGCCGATCTGACTTCCAGCGCTTTATCCAGTTTCTaGTTCATGGGAGAAAGAAGA +
Preference number: 2 (lower is better)
Translates to: GEIQAVELEDSEADLTSSALSSF*FMGERR
Trigger: TCTTCTTTCTCCCATGAAGCAGAAACTGGATAAAGC...GCTGGAAGTCAGATCGGCTTCACTATCTTCCAACTCTACAGCCTGTATCTCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427043.4
3UTR-3UTR CCA 90 bp CGTAGGTTACTTGAGCAGGAAAGGTCAAAGCTGGGGATGGAGAGATACAGGCTGGGTAACCTTGGCTGGTaGTTATTGAAAATTTCTAGA +
Preference number: 2 (lower is better)
Translates to: RRLLEQERSKLGMERYRLGNLGW*LLKISR
Trigger: TCTAGAAATTTTCAATAACCACCAGCCAAGGTTACC...CAGCCTGTATCTCTCCATCCCCAGCTTTGACCTTTCCTGCTCAAGTAACCTACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427043.4
3UTR-3UTR GCA 90 bp GTAACATGTCAGGGAAGAGAAGACCGGCATGAAAGTTGTTTCAAAATCAGGCTGAGTGGGATAAGTGAATaGACTCTTAGGTCTCTTCGG +
Preference number: 2 (lower is better)
Translates to: VTCQGREDRHESCFKIRLSGISE*TLRSLR
Trigger: CCGAAGAGACCTAAGAGTGCATTCACTTATCCCACT...CAGCCTGATTTTGAAACAACTTTCATGCCGGTCTTCTCTTCCCTGACATGTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
3UTR-3UTR CCA 90 bp ACAGTAACATGTCAGGGAAGAGAAGACCGGCATGAAAGTTGTTTCAAAATCAGGCCAGTTTCTGCTTCATaGGAGAAAGAAGACCACAGG +
Preference number: 2 (lower is better)
Translates to: TVTCQGREDRHESCFKIRPVSAS*EKEDHR
Trigger: CCTGTGGTCTTCTTTCTCCCATGAAGCAGAAACTGG...CCTGATTTTGAAACAACTTTCATGCCGGTCTTCTCTTCCCTGACATGTTACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
3UTR-3UTR TCA 90 bp GTAACATGTCAGGGAAGAGAAGACCGGCATGAAAGTTGTTTCAAAATCAGGCTGTGCAAAATAGCAAGGTaGCAACAGGGAATTTGCCAT +
Preference number: 2 (lower is better)
Translates to: VTCQGREDRHESCFKIRLCKIAR*QQGICH
Trigger: ATGGCAAATTCCCTGTTGTCACCTTGCTATTTTGCA...CAGCCTGATTTTGAAACAACTTTCATGCCGGTCTTCTCTTCCCTGACATGTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427043.4
3UTR-3UTR GCA 90 bp GTAACATGTCAGGGAAGAGAAGACCGGCATGAAAGTTGTTTCAAAATCAGGCTGGTCAAACCTTGTCCTTaGCTCTGTCTTACTGTATTG +
Preference number: 2 (lower is better)
Translates to: VTCQGREDRHESCFKIRLVKPCP*LCLTVL
Trigger: CAATACAGTAAGACAGAGGCAAGGACAAGGTTTGAC...CAGCCTGATTTTGAAACAACTTTCATGCCGGTCTTCTCTTCCCTGACATGTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
3UTR CAA 90 bp ATTAATAAAGATAGAAAGTCCAGCCTGAGGGAGGTGATGTTAATGTaGCCACCATGCCTTGTGCTAAGTTTTGGCTGGCTTGCTCTAATA +
Preference number: 2 (lower is better)
Translates to: INKDRKSSLREVMLM*PPCLVLSFGWLALI
Trigger: TATTAGAGCAAGCCAGCCAAAACTTAGCACAAGGCATGGTGGCAACATTAACATCACCTCCCTCAGGCTGGACTTTCTATCTTTATTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
3UTR-3UTR CCA 90 bp GTCAAACCTTGTCCTTGCCTCTGTCTTACTGTATTGCATTTGACAAATTATTTAGGTGCCATTTGGCCTTaGGAACAGAAGATCTTGGGG +
Preference number: 2 (lower is better)
Translates to: VKPCPCLCLTVLHLTNYLGAIWP*EQKILG
Trigger: CCCCAAGATCTTCTGTTCCCAAGGCCAAATGGCACC...TAAATAATTTGTCAAATGCAATACAGTAAGACAGAGGCAAGGACAAGGTTTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427043.4
3UTR-3UTR CCA 90 bp ACAGTAACATGTCAGGGAAGAGAAGACCGGCATGAAAGTTGTTTCAAAATCAGGGGAGGTAACCTTGGCTaGTGGTTATTGAAAATTTCT +
Preference number: 2 (lower is better)
Translates to: TVTCQGREDRHESCFKIRGGNLG*WLLKIS
Trigger: AGAAATTTTCAATAACCACCAGCCAAGGTTACCTCC...CCTGATTTTGAAACAACTTTCATGCCGGTCTTCTCTTCCCTGACATGTTACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000427043.4
3UTR CCA 72 bp CCGGATCTCACTGTCTCACCTAGAGCTGGGATGCACTaGCATGATCATAGCTCCTTGCAGCCTCAAACTCCT +
Preference number: 3 (lower is better)
Translates to: PDLTVSPRAGMH*HDHSSLQPQTP
Trigger: AGGAGTTTGAGGCTGCAAGGAGCTATGATCATGCCAGTGCATCCCAGCTCTAGGTGAGACAGTGAGATCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427043.4
3UTR-3UTR CAA 90 bp TGTGCCCGTAGGTTACTTGAGCAGGAAAGGTCAAAGCTGGGGATGGAGAGATACGGGTGCCATTTGGCCTaGGGAACAGAAGATCTTGGG +
Preference number: 3 (lower is better)
Translates to: CARRLLEQERSKLGMERYGCHLA*GTEDLG
Trigger: CCCAAGATCTTCTGTTCCCAAGGCCAAATGGCACCC...GTATCTCTCCATCCCCAGCTTTGACCTTTCCTGCTCAAGTAACCTACGGGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
3UTR-3UTR CAA 90 bp GCCCTCCAGCTTGGGGGAAATGGTGATAGCAAAGGCTTAGAGGCAAGGGTGAGTGCTGGAAGTCAAACCTaGTCCTTGCCTCTGTCTTAC +
Preference number: 3 (lower is better)
Translates to: ALQLGGNGDSKGLEARVSAGSQT*SLPLSY
Trigger: GTAAGACAGAGGCAAGGACAAGGTTTGACTTCCAGC...ACTCACCCTTGCCTCTAAGCCTTTGCTATCACCATTTCCCCCAAGCTGGAGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427043.4
3UTR-3UTR CAA 90 bp GCCCTCCAGCTTGGGGGAAATGGTGATAGCAAAGGCTTAGAGGCAAGGGTGAGTAGGCAAGGGAGGAAGTaGGTTGCAAAGATGCAGATA +
Preference number: 3 (lower is better)
Translates to: ALQLGGNGDSKGLEARVSRQGRK*VAKMQI
Trigger: TATCTGCATCTTTGCAACCAACTTCCTCCCTTGCCT...ACTCACCCTTGCCTCTAAGCCTTTGCTATCACCATTTCCCCCAAGCTGGAGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427043.4
3UTR-3UTR CAA 90 bp GTAACATGTCAGGGAAGAGAAGACCGGCATGAAAGTTGTTTCAAAATCAGGCTGAGGAGCCAGCAGAGGTaGGATTGGGGTAGGAGGGGA +
Preference number: 3 (lower is better)
Translates to: VTCQGREDRHESCFKIRLRSQQR*DWGRRG
Trigger: TCCCCTCCTACCCCAATCCAACCTCTGCTGGCTCCT...CAGCCTGATTTTGAAACAACTTTCATGCCGGTCTTCTCTTCCCTGACATGTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000427043.4
3UTR-3UTR CAA 90 bp CAGAGAGGCAAGGGAGGAAGTTGGTTGCAAAGATGCAGATATGAGAAGCTGAGGGTGCCCGTAGGTTACTaGAGCAGGAAAGGTCAAAGC +
Preference number: 3 (lower is better)
Translates to: QRGKGGSWLQRCRYEKLRVPVGY*SRKGQS
Trigger: GCTTTGACCTTTCCTGCTCAAGTAACCTACGGGCAC...CCTCAGCTTCTCATATCTGCATCTTTGCAACCAACTTCCTCCCTTGCCTCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427043.4
3UTR CCA 72 bp GGTGTGATGGAAAAGAAACTGGGTGCCATTTGGCCTTaGGAACAGAAGATCTTGGGGAGAGGTAAGAGCTGC +
Preference number: 3 (lower is better)
Translates to: GVMEKKLGAIWP*EQKILGRGKSC
Trigger: GCAGCTCTTACCTCTCCCCAAGATCTTCTGTTCCCAAGGCCAAATGGCACCCAGTTTCTTTTCCATCACACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427043.4
3UTR CCA 72 bp GTGCCCGTAGGTTACTTGAGCAGGAAAGGTCAAAGCTaGGGATGGAGAGATACAGGCTGTAGAGTTGGAAGA +
Preference number: 3 (lower is better)
Translates to: VPVGYLSRKGQS*GWRDTGCRVGR
Trigger: TCTTCCAACTCTACAGCCTGTATCTCTCCATCCCCAGCTTTGACCTTTCCTGCTCAAGTAACCTACGGGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427043.4
3UTR-3UTR CAA 90 bp CATGAAAGTTGTTTCAAAATCAGGCTGGACTGGGCATGGTGTCTGGTGGCATATACCTGGGATCTGAGGTaGAGGATACCAGGGAACGCT +
Preference number: 3 (lower is better)
Translates to: HESCFKIRLDWAWCLVAYTWDLR*RIPGNA
Trigger: AGCGTTCCCTGGTATCCTCAACCTCAGATCCCAGGT...ATATGCCACCAGACACCATGCCCAGTCCAGCCTGATTTTGAAACAACTTTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
3UTR GCA 72 bp TTTTGGCTGGCTTGCTCTAATAAGGACAGGAGGACCTaGATGAAGGGTGTGATGGAAAAGAAACTGGGTGCC +
Preference number: 3 (lower is better)
Translates to: FWLACSNKDRRT*MKGVMEKKLGA
Trigger: GGCACCCAGTTTCTTTTCCATCACACCCTTCATGCAGGTCCTCCTGTCCTTATTAGAGCAAGCCAGCCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427043.4
3UTR CCA 72 bp GATGGATCAGGATTTAGCAGGTTGTGGAAAAGAGGCTaGGCTGGAAGTCAAACCTTGTCCTTGCCTCTGTCT +
Preference number: 3 (lower is better)
Translates to: DGSGFSRLWKRG*AGSQTLSLPLS
Trigger: AGACAGAGGCAAGGACAAGGTTTGACTTCCAGCCCAGCCTCTTTTCCACAACCTGCTAAATCCTGATCCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
3UTR CCA 72 bp GTTGTTTCAAAATCAGGCTGGACTGGGCATGGTGTCTaGTGGCATATGAAGGATGCAAGAAGAGAGGGGTCA +
Preference number: 3 (lower is better)
Translates to: VVSKSGWTGHGV*WHMKDARREGS
Trigger: TGACCCCTCTCTTCTTGCATCCTTCATATGCCACCAGACACCATGCCCAGTCCAGCCTGATTTTGAAACAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427043.4
3UTR CCA 72 bp GACCGGCATGAAAGTTGTTTCAAAATCAGGCTGGACTaGGCATGGTGTCTGGTGGCATATGAAGGATGCAAG +
Preference number: 3 (lower is better)
Translates to: DRHESCFKIRLD*AWCLVAYEGCK
Trigger: CTTGCATCCTTCATATGCCACCAGACACCATGCCCAGTCCAGCCTGATTTTGAAACAACTTTCATGCCGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
3UTR-3UTR CAA 90 bp CATGAAAGTTGTTTCAAAATCAGGCTGGACTGGGCATGGTGTCTGGTGGCATATTGGGAACAGAAGATCTaGGGGAGAGGTAAGAGCTGC +
Preference number: 3 (lower is better)
Translates to: HESCFKIRLDWAWCLVAYWEQKI*GRGKSC
Trigger: GCAGCTCTTACCTCTCCCCAAGATCTTCTGTTCCCA...ATATGCCACCAGACACCATGCCCAGTCCAGCCTGATTTTGAAACAACTTTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427043.4
3UTR TCA 72 bp CAAGAAGAGAGGGGTCATAGATTGACTGCAGAAATCTaGACCTGGGATCTGAGGTTGAGGATACCAGGGAAC +
Preference number: 3 (lower is better)
Translates to: QEERGHRLTAEI*TWDLRLRIPGN
Trigger: GTTCCCTGGTATCCTCAACCTCAGATCCCAGGTTCAGATTTCTGCAGTCAATCTATGACCCCTCTCTTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
3UTR TCA 72 bp CTGGACAGTAACATGTCAGGGAAGAGAAGACCGGCATaGAAGTTGTTTCAAAATCAGGCTGGACTGGGCATG +
Preference number: 3 (lower is better)
Translates to: LDSNMSGKRRPA*KLFQNQAGLGM
Trigger: CATGCCCAGTCCAGCCTGATTTTGAAACAACTTTCATGCCGGTCTTCTCTTCCCTGACATGTTACTGTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
3UTR CCA 72 bp ATGAAGGGTGTGATGGAAAAGAAACTGGGTGCCATTTaGCCTTGGGAACAGAAGATCTTGGGGAGAGGTAAG +
Preference number: 3 (lower is better)
Translates to: MKGVMEKKLGAI*PWEQKILGRGK
Trigger: CTTACCTCTCCCCAAGATCTTCTGTTCCCAAGGCCAAATGGCACCCAGTTTCTTTTCCATCACACCCTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427043.4
3UTR CCA 72 bp GATGTTAATGTTGCCACCATGCCTTGTGCTAAGTTTTaGCTGGCTTGCTCTAATAAGGACAGGAGGACCTGC +
Preference number: 3 (lower is better)
Translates to: DVNVATMPCAKF*LACSNKDRRTC
Trigger: GCAGGTCCTCCTGTCCTTATTAGAGCAAGCCAGCCAAAACTTAGCACAAGGCATGGTGGCAACATTAACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
3UTR CCA 72 bp GAGAAGACCGGCATGAAAGTTGTTTCAAAATCAGGCTaGACTGGGCATGGTGTCTGGTGGCATATGAAGGAT +
Preference number: 3 (lower is better)
Translates to: EKTGMKVVSKSG*TGHGVWWHMKD
Trigger: ATCCTTCATATGCCACCAGACACCATGCCCAGTCCAGCCTGATTTTGAAACAACTTTCATGCCGGTCTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
3UTR-3UTR CAA 90 bp GCCCTCCAGCTTGGGGGAAATGGTGATAGCAAAGGCTTAGAGGCAAGGGTGAGTTGTCTATGGAAAATCTaGAGCTTTATCCAGTTTCTG +
Preference number: 3 (lower is better)
Translates to: ALQLGGNGDSKGLEARVSCLWKI*SFIQFL
Trigger: CAGAAACTGGATAAAGCTCAAGATTTTCCATAGACA...ACTCACCCTTGCCTCTAAGCCTTTGCTATCACCATTTCCCCCAAGCTGGAGGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427043.4
3UTR-3UTR CAA 90 bp CATGAAAGTTGTTTCAAAATCAGGCTGGACTGGGCATGGTGTCTGGTGGCATATGGAAAGAACTGGAAGTaGGGAATGCATTGGCCTCAG +
Preference number: 3 (lower is better)
Translates to: HESCFKIRLDWAWCLVAYGKNWK*GMHWPQ
Trigger: CTGAGGCCAATGCATTCCCAACTTCCAGTTCTTTCC...ATATGCCACCAGACACCATGCCCAGTCCAGCCTGATTTTGAAACAACTTTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
3UTR-3UTR CAA 90 bp GGAGAGATACAGGCTGTAGAGTTGGAAGATAGTGAAGCCGATCTGACTTCCAGCAATAGATGGATTTTCTaGGAGAGAGGGCAGAGTCCA +
Preference number: 3 (lower is better)
Translates to: GEIQAVELEDSEADLTSSNRWIF*ERGQSP
Trigger: TGGACTCTGCCCTCTCTCCAAGAAAATCCATCTATT...GCTGGAAGTCAGATCGGCTTCACTATCTTCCAACTCTACAGCCTGTATCTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
3UTR-3UTR CAA 90 bp CATGAAAGTTGTTTCAAAATCAGGCTGGACTGGGCATGGTGTCTGGTGGCATATATACAGGCTGTAGAGTaGGAAGATAGTGAAGCCGAT +
Preference number: 3 (lower is better)
Translates to: HESCFKIRLDWAWCLVAYIQAVE*EDSEAD
Trigger: ATCGGCTTCACTATCTTCCAACTCTACAGCCTGTAT...ATATGCCACCAGACACCATGCCCAGTCCAGCCTGATTTTGAAACAACTTTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
3UTR CCA 72 bp CATGAAAGTTGTTTCAAAATCAGGCTGGACTGGGCATaGTGTCTGGTGGCATATGAAGGATGCAAGAAGAGA +
Preference number: 3 (lower is better)
Translates to: HESCFKIRLDWA*CLVAYEGCKKR
Trigger: TCTCTTCTTGCATCCTTCATATGCCACCAGACACCATGCCCAGTCCAGCCTGATTTTGAAACAACTTTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
3UTR-3UTR CAA 90 bp GTAACATGTCAGGGAAGAGAAGACCGGCATGAAAGTTGTTTCAAAATCAGGCTGCAAGGAGGAGTGGTTTaGGAGAGAAAGAATGGTTCT +
Preference number: 3 (lower is better)
Translates to: VTCQGREDRHESCFKIRLQGGVV*ERKNGS
Trigger: AGAACCATTCTTTCTCTCCAAAACCACTCCTCCTTG...CAGCCTGATTTTGAAACAACTTTCATGCCGGTCTTCTCTTCCCTGACATGTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
3UTR-3UTR CAA 90 bp CATGAAAGTTGTTTCAAAATCAGGCTGGACTGGGCATGGTGTCTGGTGGCATATAGTCAAACCTTGTCCTaGCCTCTGTCTTACTGTATT +
Preference number: 3 (lower is better)
Translates to: HESCFKIRLDWAWCLVAYSQTLS*PLSYCI
Trigger: AATACAGTAAGACAGAGGCAAGGACAAGGTTTGACT...ATATGCCACCAGACACCATGCCCAGTCCAGCCTGATTTTGAAACAACTTTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
3UTR CCA 72 bp CCTGGTGCTGCAAGGTTACCTGGAGGTAACCTTGGCTaGTGGTTATTGAAAATTTCTAGAAACTTCCAGAAA +
Preference number: 3 (lower is better)
Translates to: PGAARLPGGNLG*WLLKISRNFQK
Trigger: TTTCTGGAAGTTTCTAGAAATTTTCAATAACCACCAGCCAAGGTTACCTCCAGGTAACCTTGCAGCACCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
3UTR-3UTR CAA 90 bp CATGAAAGTTGTTTCAAAATCAGGCTGGACTGGGCATGGTGTCTGGTGGCATATCAGAAAGCTCCTACCTaGGAGATAGGGAAAATTTTT +
Preference number: 3 (lower is better)
Translates to: HESCFKIRLDWAWCLVAYQKAPT*EIGKIF
Trigger: AAAAATTTTCCCTATCTCCAAGGTAGGAGCTTTCTG...ATATGCCACCAGACACCATGCCCAGTCCAGCCTGATTTTGAAACAACTTTCATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427043.4
3UTR GCA 72 bp GGAAAAGAGGCTGGGCTGGAAGTCAAACCTTGTCCTTaGCTCTGTCTTACTGTATTGCATTTGACAAATTAT +
Preference number: 3 (lower is better)
Translates to: GKEAGLEVKPCP*LCLTVLHLTNY
Trigger: ATAATTTGTCAAATGCAATACAGTAAGACAGAGGCAAGGACAAGGTTTGACTTCCAGCCCAGCCTCTTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
3UTR-3UTR CAA 90 bp GTCAAACCTTGTCCTTGCCTCTGTCTTACTGTATTGCATTTGACAAATTATTTAGAGGTGATGTTAATGTaGCCACCATGCCTTGTGCTA +
Preference number: 3 (lower is better)
Translates to: VKPCPCLCLTVLHLTNYLEVMLM*PPCLVL
Trigger: TAGCACAAGGCATGGTGGCAACATTAACATCACCTC...TAAATAATTTGTCAAATGCAATACAGTAAGACAGAGGCAAGGACAAGGTTTGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR GCA 90 bp GCCCTCCAGCTTGGGGGAAATGGTGATAGCAAAGGCTTAGAGGCAAGGGTGAGTAACCAGCTCTGCTTCTaGCATCCGCCGGGTCACCTC +
Preference number: 4 (lower is better)
Translates to: ALQLGGNGDSKGLEARVSNQLCF*HPPGHL
Trigger: GAGGTGACCCGGCGGATGGCAGAAGCAGAGCTGGTT...ACTCACCCTTGCCTCTAAGCCTTTGCTATCACCATTTCCCCCAAGCTGGAGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR TCA 90 bp GCCCTCCAGCTTGGGGGAAATGGTGATAGCAAAGGCTTAGAGGCAAGGGTGAGTCTTCCCGGGCTTTGGTaGCACACAGTATTAGGGCCA +
Preference number: 4 (lower is better)
Translates to: ALQLGGNGDSKGLEARVSLPGLW*HTVLGP
Trigger: TGGCCCTAATACTGTGTGTCACCAAAGCCCGGGAAG...ACTCACCCTTGCCTCTAAGCCTTTGCTATCACCATTTCCCCCAAGCTGGAGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR TCA 90 bp CGTAGGTTACTTGAGCAGGAAAGGTCAAAGCTGGGGATGGAGAGATACAGGCTGCCCTCCCGTGAGCCATaGGTACCACGAAGGCACAAC +
Preference number: 4 (lower is better)
Translates to: RRLLEQERSKLGMERYRLPSREP*VPRRHN
Trigger: GTTGTGCCTTCGTGGTACTCATGGCTCACGGGAGGG...CAGCCTGTATCTCTCCATCCCCAGCTTTGACCTTTCCTGCTCAAGTAACCTACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR TCA 90 bp CGTAGGTTACTTGAGCAGGAAAGGTCAAAGCTGGGGATGGAGAGATACAGGCTGCCCCATCTTCTCCCTTaGGGAAGCCTTCCCTCCCGT +
Preference number: 4 (lower is better)
Translates to: RRLLEQERSKLGMERYRLPHLLP*GSLPSR
Trigger: ACGGGAGGGAAGGCTTCCTCAAGGGAGAAGATGGGG...CAGCCTGTATCTCTCCATCCCCAGCTTTGACCTTTCCTGCTCAAGTAACCTACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR TCA 90 bp CGTAGGTTACTTGAGCAGGAAAGGTCAAAGCTGGGGATGGAGAGATACAGGCTGACTCCTGGCCTCAAGTaGTCCTCCCGCTTCAGACTC +
Preference number: 4 (lower is better)
Translates to: RRLLEQERSKLGMERYRLTPGLK*SSRFRL
Trigger: GAGTCTGAAGCGGGAGGATCACTTGAGGCCAGGAGT...CAGCCTGTATCTCTCCATCCCCAGCTTTGACCTTTCCTGCTCAAGTAACCTACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR CCA 90 bp GCCCTCCAGCTTGGGGGAAATGGTGATAGCAAAGGCTTAGAGGCAAGGGTGAGTGGTGCCATTTGGCCTTaGGAACAGAAGATCTTGGGG +
Preference number: 4 (lower is better)
Translates to: ALQLGGNGDSKGLEARVSGAIWP*EQKILG
Trigger: CCCCAAGATCTTCTGTTCCCAAGGCCAAATGGCACC...ACTCACCCTTGCCTCTAAGCCTTTGCTATCACCATTTCCCCCAAGCTGGAGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR TCA 90 bp CAGAGAGGCAAGGGAGGAAGTTGGTTGCAAAGATGCAGATATGAGAAGCTGAGGTCTTGGAGAAGGGGCTaGCAGTGTGGAATCTCCCGG +
Preference number: 4 (lower is better)
Translates to: QRGKGGSWLQRCRYEKLRSWRRG*QCGISR
Trigger: CCGGGAGATTCCACACTGTCAGCCCCTTCTCCAAGA...CCTCAGCTTCTCATATCTGCATCTTTGCAACCAACTTCCTCCCTTGCCTCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR TCA 90 bp TGTGCCCGTAGGTTACTTGAGCAGGAAAGGTCAAAGCTGGGGATGGAGAGATACCCTCAGGAGGAGGTTTaGCCTCCAAGTGAGATGCAG +
Preference number: 4 (lower is better)
Translates to: CARRLLEQERSKLGMERYPQEEV*PPSEMQ
Trigger: CTGCATCTCACTTGGAGGTCAAACCTCCTCCTGAGG...GTATCTCTCCATCCCCAGCTTTGACCTTTCCTGCTCAAGTAACCTACGGGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR GCA 90 bp TGTGCCCGTAGGTTACTTGAGCAGGAAAGGTCAAAGCTGGGGATGGAGAGATACGCCGTTTCCGGAGGGTaGTTTGGATTTCAGGGTTCG +
Preference number: 4 (lower is better)
Translates to: CARRLLEQERSKLGMERYAVSGG*FGFQGS
Trigger: CGAACCCTGAAATCCAAAGCACCCTCCGGAAACGGC...GTATCTCTCCATCCCCAGCTTTGACCTTTCCTGCTCAAGTAACCTACGGGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR GCA 90 bp GCCCTCCAGCTTGGGGGAAATGGTGATAGCAAAGGCTTAGAGGCAAGGGTGAGTATGATCATAGCTCCTTaGAGCCTCAAACTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: ALQLGGNGDSKGLEARVSMIIAP*SLKLLG
Trigger: GCCCAGGAGTTTGAGGCTGCAAGGAGCTATGATCAT...ACTCACCCTTGCCTCTAAGCCTTTGCTATCACCATTTCCCCCAAGCTGGAGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR CCA 90 bp TGTGCCCGTAGGTTACTTGAGCAGGAAAGGTCAAAGCTGGGGATGGAGAGATACAAGGGGCTGACAGTGTaGAATCTCCCGGGGTTTCTC +
Preference number: 4 (lower is better)
Translates to: CARRLLEQERSKLGMERYKGLTV*NLPGFL
Trigger: GAGAAACCCCGGGAGATTCCACACTGTCAGCCCCTT...GTATCTCTCCATCCCCAGCTTTGACCTTTCCTGCTCAAGTAACCTACGGGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR CCA 90 bp GCCCTCCAGCTTGGGGGAAATGGTGATAGCAAAGGCTTAGAGGCAAGGGTGAGTGGTCAAAGCTGGGGATaGAGAGATACAGGCTGTAGA +
Preference number: 4 (lower is better)
Translates to: ALQLGGNGDSKGLEARVSGQSWG*RDTGCR
Trigger: TCTACAGCCTGTATCTCTCCATCCCCAGCTTTGACC...ACTCACCCTTGCCTCTAAGCCTTTGCTATCACCATTTCCCCCAAGCTGGAGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR CCA 90 bp GCCCTCCAGCTTGGGGGAAATGGTGATAGCAAAGGCTTAGAGGCAAGGGTGAGTATACCAGGGAACGCTTaGAGGAGTAACCGGGAAGAA +
Preference number: 4 (lower is better)
Translates to: ALQLGGNGDSKGLEARVSIPGNA*RSNREE
Trigger: TTCTTCCCGGTTACTCCTCCAAGCGTTCCCTGGTAT...ACTCACCCTTGCCTCTAAGCCTTTGCTATCACCATTTCCCCCAAGCTGGAGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR CCA 90 bp GCCCTCCAGCTTGGGGGAAATGGTGATAGCAAAGGCTTAGAGGCAAGGGTGAGTGGGCATGGTGTCTGGTaGCATATGAAGGATGCAAGA +
Preference number: 4 (lower is better)
Translates to: ALQLGGNGDSKGLEARVSGHGVW*HMKDAR
Trigger: TCTTGCATCCTTCATATGCCACCAGACACCATGCCC...ACTCACCCTTGCCTCTAAGCCTTTGCTATCACCATTTCCCCCAAGCTGGAGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR TCA 90 bp AAGACCGGCATGAAAGTTGTTTCAAAATCAGGCTGGACTGGGCATGGTGTCTGGGGCCAGGCGGGCACCTaGCATATCATATTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: KTGMKVVSKSGWTGHGVWGQAGT*HIIFLL
Trigger: GAGGAGAAATATGATATGTCAGGTGCCCGCCTGGCC...CCAGACACCATGCCCAGTCCAGCCTGATTTTGAAACAACTTTCATGCCGGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR GCA 90 bp AAGACCGGCATGAAAGTTGTTTCAAAATCAGGCTGGACTGGGCATGGTGTCTGGTTCTTGAACCAGCTCTaGTTCTGCCATCCGCCGGGT +
Preference number: 4 (lower is better)
Translates to: KTGMKVVSKSGWTGHGVWFLNQL*FCHPPG
Trigger: ACCCGGCGGATGGCAGAAGCAGAGCTGGTTCAAGAA...CCAGACACCATGCCCAGTCCAGCCTGATTTTGAAACAACTTTCATGCCGGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR TCA 90 bp TGTGCCCGTAGGTTACTTGAGCAGGAAAGGTCAAAGCTGGGGATGGAGAGATACGTGTCTGGTGGCATATaGAGGATGCAAGAAGAGAGG +
Preference number: 4 (lower is better)
Translates to: CARRLLEQERSKLGMERYVSGGI*RMQEER
Trigger: CCTCTCTTCTTGCATCCTTCATATGCCACCAGACAC...GTATCTCTCCATCCCCAGCTTTGACCTTTCCTGCTCAAGTAACCTACGGGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR GCA 90 bp GCCCTCCAGCTTGGGGGAAATGGTGATAGCAAAGGCTTAGAGGCAAGGGTGAGTGTGGCATATGAAGGATaGAAGAAGAGAGGGGTCATA +
Preference number: 4 (lower is better)
Translates to: ALQLGGNGDSKGLEARVSVAYEG*KKRGVI
Trigger: TATGACCCCTCTCTTCTTGCATCCTTCATATGCCAC...ACTCACCCTTGCCTCTAAGCCTTTGCTATCACCATTTCCCCCAAGCTGGAGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR CCA 90 bp CAGAGAGGCAAGGGAGGAAGTTGGTTGCAAAGATGCAGATATGAGAAGCTGAGGTTTTCCAGCTCTTCCTaGAATTGCTCGGCAGTGGGG +
Preference number: 4 (lower is better)
Translates to: QRGKGGSWLQRCRYEKLRFSSSS*NCSAVG
Trigger: CCCCACTGCCGAGCAATTCCAGGAAGAGCTGGAAAA...CCTCAGCTTCTCATATCTGCATCTTTGCAACCAACTTCCTCCCTTGCCTCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR CCA 90 bp GCCCTCCAGCTTGGGGGAAATGGTGATAGCAAAGGCTTAGAGGCAAGGGTGAGTTGTTGGGATGGTTTGTaGGCTGTCTTTGATGACCAT +
Preference number: 4 (lower is better)
Translates to: ALQLGGNGDSKGLEARVSCWDGL*AVFDDH
Trigger: ATGGTCATCAAAGACAGCCCACAAACCATCCCAACA...ACTCACCCTTGCCTCTAAGCCTTTGCTATCACCATTTCCCCCAAGCTGGAGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR CCA 90 bp CAGAGAGGCAAGGGAGGAAGTTGGTTGCAAAGATGCAGATATGAGAAGCTGAGGGGGAACAGAAGATCTTaGGGAGAGGTAAGAGCTGCC +
Preference number: 4 (lower is better)
Translates to: QRGKGGSWLQRCRYEKLRGNRRS*GEVRAA
Trigger: GGCAGCTCTTACCTCTCCCCAAGATCTTCTGTTCCC...CCTCAGCTTCTCATATCTGCATCTTTGCAACCAACTTCCTCCCTTGCCTCTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR CCA 90 bp TGTGCCCGTAGGTTACTTGAGCAGGAAAGGTCAAAGCTGGGGATGGAGAGATACAGGAAAGGTCAAAGCTaGGGATGGAGAGATACAGGC +
Preference number: 4 (lower is better)
Translates to: CARRLLEQERSKLGMERYRKGQS*GWRDTG
Trigger: GCCTGTATCTCTCCATCCCCAGCTTTGACCTTTCCT...GTATCTCTCCATCCCCAGCTTTGACCTTTCCTGCTCAAGTAACCTACGGGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR CCA 90 bp TGTGCCCGTAGGTTACTTGAGCAGGAAAGGTCAAAGCTGGGGATGGAGAGATACACTGGGCATGGTGTCTaGTGGCATATGAAGGATGCA +
Preference number: 4 (lower is better)
Translates to: CARRLLEQERSKLGMERYTGHGV*WHMKDA
Trigger: TGCATCCTTCATATGCCACCAGACACCATGCCCAGT...GTATCTCTCCATCCCCAGCTTTGACCTTTCCTGCTCAAGTAACCTACGGGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
3UTR CAA 72 bp GTCAAAGCTGGGGATGGAGAGATACAGGCTGTAGAGTaGGAAGATAGTGAAGCCGATCTGACTTCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: VKAGDGEIQAVE*EDSEADLTSSL
Trigger: CAGGCTGGAAGTCAGATCGGCTTCACTATCTTCCAACTCTACAGCCTGTATCTCTCCATCCCCAGCTTTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR TCA 90 bp AAGACCGGCATGAAAGTTGTTTCAAAATCAGGCTGGACTGGGCATGGTGTCTGGCGGGAAGAAAAGCCCTaGGTTTTTAGTGACGCTGGA +
Preference number: 4 (lower is better)
Translates to: KTGMKVVSKSGWTGHGVWREEKP*VFSDAG
Trigger: TCCAGCGTCACTAAAAACTCAGGGCTTTTCTTCCCG...CCAGACACCATGCCCAGTCCAGCCTGATTTTGAAACAACTTTCATGCCGGTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR TCA 90 bp GGAGAGATACAGGCTGTAGAGTTGGAAGATAGTGAAGCCGATCTGACTTCCAGCGAGAAGCTGAGGACTTaGGCCTGGACAGTAACATGT +
Preference number: 4 (lower is better)
Translates to: GEIQAVELEDSEADLTSSEKLRT*AWTVTC
Trigger: ACATGTTACTGTCCAGGCTCAAGTCCTCAGCTTCTC...GCTGGAAGTCAGATCGGCTTCACTATCTTCCAACTCTACAGCCTGTATCTCTCC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR TCA 90 bp AAGACCGGCATGAAAGTTGTTTCAAAATCAGGCTGGACTGGGCATGGTGTCTGGGCATCTAATCCTGGGTaGGAGGGAAGGATCAATCAG +
Preference number: 4 (lower is better)
Translates to: KTGMKVVSKSGWTGHGVWASNPG*EGRINQ
Trigger: CTGATTGATCCTTCCCTCTCACCCAGGATTAGATGC...CCAGACACCATGCCCAGTCCAGCCTGATTTTGAAACAACTTTCATGCCGGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR GCA 90 bp GCCCTCCAGCTTGGGGGAAATGGTGATAGCAAAGGCTTAGAGGCAAGGGTGAGTAGGGAGGAAGTTGGTTaGAAAGATGCAGATATGAGA +
Preference number: 4 (lower is better)
Translates to: ALQLGGNGDSKGLEARVSREEVG*KDADMR
Trigger: TCTCATATCTGCATCTTTGCAACCAACTTCCTCCCT...ACTCACCCTTGCCTCTAAGCCTTTGCTATCACCATTTCCCCCAAGCTGGAGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR CCA 90 bp CAGAGAGGCAAGGGAGGAAGTTGGTTGCAAAGATGCAGATATGAGAAGCTGAGGGGCATCTGTGTATGTTaGGATGGTTTGTGGGCTGTC +
Preference number: 4 (lower is better)
Translates to: QRGKGGSWLQRCRYEKLRGICVC*DGLWAV
Trigger: GACAGCCCACAAACCATCCCAACATACACAGATGCC...CCTCAGCTTCTCATATCTGCATCTTTGCAACCAACTTCCTCCCTTGCCTCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR CCA 90 bp TGTGCCCGTAGGTTACTTGAGCAGGAAAGGTCAAAGCTGGGGATGGAGAGATACTTCCGGAGGGTGCTTTaGATTTCAGGGTTCGTTTTC +
Preference number: 4 (lower is better)
Translates to: CARRLLEQERSKLGMERYFRRVL*ISGFVF
Trigger: GAAAACGAACCCTGAAATCCAAAGCACCCTCCGGAA...GTATCTCTCCATCCCCAGCTTTGACCTTTCCTGCTCAAGTAACCTACGGGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR CCA 90 bp CGTAGGTTACTTGAGCAGGAAAGGTCAAAGCTGGGGATGGAGAGATACAGGCTGAAACTGGGTGCCATTTaGCCTTGGGAACAGAAGATC +
Preference number: 4 (lower is better)
Translates to: RRLLEQERSKLGMERYRLKLGAI*PWEQKI
Trigger: GATCTTCTGTTCCCAAGGCCAAATGGCACCCAGTTT...CAGCCTGTATCTCTCCATCCCCAGCTTTGACCTTTCCTGCTCAAGTAACCTACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR CCA 90 bp TGTGCCCGTAGGTTACTTGAGCAGGAAAGGTCAAAGCTGGGGATGGAGAGATACTTGTGGAAAAGAGGCTaGGCTGGAAGTCAAACCTTG +
Preference number: 4 (lower is better)
Translates to: CARRLLEQERSKLGMERYLWKRG*AGSQTL
Trigger: CAAGGTTTGACTTCCAGCCCAGCCTCTTTTCCACAA...GTATCTCTCCATCCCCAGCTTTGACCTTTCCTGCTCAAGTAACCTACGGGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR CCA 90 bp GGAGAGATACAGGCTGTAGAGTTGGAAGATAGTGAAGCCGATCTGACTTCCAGCGGATTTAGCAGGTTGTaGAAAAGAGGCTGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: GEIQAVELEDSEADLTSSGFSRL*KRGWAG
Trigger: TCCAGCCCAGCCTCTTTTCCACAACCTGCTAAATCC...GCTGGAAGTCAGATCGGCTTCACTATCTTCCAACTCTACAGCCTGTATCTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
3UTR CAA 72 bp GAGTTTTTAGTGACGCTGGATGTGCCCGTAGGTTACTaGAGCAGGAAAGGTCAAAGCTGGGGATGGAGAGAT +
Preference number: 4 (lower is better)
Translates to: EFLVTLDVPVGY*SRKGQSWGWRD
Trigger: ATCTCTCCATCCCCAGCTTTGACCTTTCCTGCTCAAGTAACCTACGGGCACATCCAGCGTCACTAAAAACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR TCA 90 bp ACAGTAACATGTCAGGGAAGAGAAGACCGGCATGAAAGTTGTTTCAAAATCAGGCCTAGTTGCCAATACTaGGCTGGGCACCGAGGAGGA +
Preference number: 4 (lower is better)
Translates to: TVTCQGREDRHESCFKIRPSCQY*AGHRGG
Trigger: TCCTCCTCGGTGCCCAGCTCAGTATTGGCAACTAGG...CCTGATTTTGAAACAACTTTCATGCCGGTCTTCTCTTCCCTGACATGTTACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR TCA 90 bp GTAACATGTCAGGGAAGAGAAGACCGGCATGAAAGTTGTTTCAAAATCAGGCTGTTTCTCCTTTGGTTGTaGGTCCCGGCTCTCAGCACC +
Preference number: 4 (lower is better)
Translates to: VTCQGREDRHESCFKIRLFLLWL*VPALST
Trigger: GGTGCTGAGAGCCGGGACTCACAACCAAAGGAGAAA...CAGCCTGATTTTGAAACAACTTTCATGCCGGTCTTCTCTTCCCTGACATGTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR TCA 90 bp TGTGCCCGTAGGTTACTTGAGCAGGAAAGGTCAAAGCTGGGGATGGAGAGATACTATGTTGTGTCTTCTTaGGTGTTCCAGGGAGATCAC +
Preference number: 4 (lower is better)
Translates to: CARRLLEQERSKLGMERYYVVSS*VFQGDH
Trigger: GTGATCTCCCTGGAACACTCAAGAAGACACAACATA...GTATCTCTCCATCCCCAGCTTTGACCTTTCCTGCTCAAGTAACCTACGGGCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR GCA 90 bp GGAGAGATACAGGCTGTAGAGTTGGAAGATAGTGAAGCCGATCTGACTTCCAGCGTGAGACAGAAAGAATaGTGGAAGGAAAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: GEIQAVELEDSEADLTSSVRQKE*WKESSS
Trigger: GGAGGAGCTTTCCTTCCAGCATTCTTTCTGTCTCAC...GCTGGAAGTCAGATCGGCTTCACTATCTTCCAACTCTACAGCCTGTATCTCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR GCA 90 bp AAGACCGGCATGAAAGTTGTTTCAAAATCAGGCTGGACTGGGCATGGTGTCTGGGGAAAAGAAACTGGGTaGCATTTGGCCTTGGGAACA +
Preference number: 4 (lower is better)
Translates to: KTGMKVVSKSGWTGHGVWGKETG*HLALGT
Trigger: TGTTCCCAAGGCCAAATGGCACCCAGTTTCTTTTCC...CCAGACACCATGCCCAGTCCAGCCTGATTTTGAAACAACTTTCATGCCGGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR GCA 90 bp CATGAAAGTTGTTTCAAAATCAGGCTGGACTGGGCATGGTGTCTGGTGGCATATGTTAGGACACCAACTTaGCAGCCAAGGAGGAGTGGT +
Preference number: 4 (lower is better)
Translates to: HESCFKIRLDWAWCLVAYVRTPT*QPRRSG
Trigger: ACCACTCCTCCTTGGCTGGCAAGTTGGTGTCCTAAC...ATATGCCACCAGACACCATGCCCAGTCCAGCCTGATTTTGAAACAACTTTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR CCA 90 bp CGTAGGTTACTTGAGCAGGAAAGGTCAAAGCTGGGGATGGAGAGATACAGGCTGTGGGGTCTCTTTTCATaGTGCTTTCGAATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: RRLLEQERSKLGMERYRLWGLFS*CFRISA
Trigger: AGCTGAGATTCGAAAGCACCATGAAAAGAGACCCCA...CAGCCTGTATCTCTCCATCCCCAGCTTTGACCTTTCCTGCTCAAGTAACCTACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR CCA 90 bp AAGACCGGCATGAAAGTTGTTTCAAAATCAGGCTGGACTGGGCATGGTGTCTGGGAATCGATGGCCTGCTaGAATTTTTCCAGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: KTGMKVVSKSGWTGHGVWESMAC*NFSSSS
Trigger: GGAAGAGCTGGAAAAATTCCAGCAGGCCATCGATTC...CCAGACACCATGCCCAGTCCAGCCTGATTTTGAAACAACTTTCATGCCGGTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR CCA 90 bp AAGACCGGCATGAAAGTTGTTTCAAAATCAGGCTGGACTGGGCATGGTGTCTGGCCAGTTTCTGCTTCATaGGAGAAAGAAGACCACAGG +
Preference number: 4 (lower is better)
Translates to: KTGMKVVSKSGWTGHGVWPVSAS*EKEDHR
Trigger: CCTGTGGTCTTCTTTCTCCCATGAAGCAGAAACTGG...CCAGACACCATGCCCAGTCCAGCCTGATTTTGAAACAACTTTCATGCCGGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR CCA 90 bp CATGAAAGTTGTTTCAAAATCAGGCTGGACTGGGCATGGTGTCTGGTGGCATATAAAATCAGGCTGGACTaGGCATGGTGTCTGGTGGCA +
Preference number: 4 (lower is better)
Translates to: HESCFKIRLDWAWCLVAYKIRLD*AWCLVA
Trigger: TGCCACCAGACACCATGCCCAGTCCAGCCTGATTTT...ATATGCCACCAGACACCATGCCCAGTCCAGCCTGATTTTGAAACAACTTTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427043.4
3UTR CAA 72 bp GATAGAAAGTCCAGCCTGAGGGAGGTGATGTTAATGTaGCCACCATGCCTTGTGCTAAGTTTTGGCTGGCTT +
Preference number: 4 (lower is better)
Translates to: DRKSSLREVMLM*PPCLVLSFGWL
Trigger: AAGCCAGCCAAAACTTAGCACAAGGCATGGTGGCAACATTAACATCACCTCCCTCAGGCTGGACTTTCTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR TCA 90 bp CATGAAAGTTGTTTCAAAATCAGGCTGGACTGGGCATGGTGTCTGGTGGCATATAGAGATTCTCCAGCTTaGCCATCTCCCCATCTTCTC +
Preference number: 4 (lower is better)
Translates to: HESCFKIRLDWAWCLVAYRDSPA*PSPHLL
Trigger: GAGAAGATGGGGAGATGGTCAAGCTGGAGAATCTCT...ATATGCCACCAGACACCATGCCCAGTCCAGCCTGATTTTGAAACAACTTTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR TCA 90 bp TGTGCCCGTAGGTTACTTGAGCAGGAAAGGTCAAAGCTGGGGATGGAGAGATACGCCTCTAAATTTCTGTaGGACAGAAAGAATGCTGGA +
Preference number: 4 (lower is better)
Translates to: CARRLLEQERSKLGMERYASKFL*DRKNAG
Trigger: TCCAGCATTCTTTCTGTCTCACAGAAATTTAGAGGC...GTATCTCTCCATCCCCAGCTTTGACCTTTCCTGCTCAAGTAACCTACGGGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR TCA 90 bp CATGAAAGTTGTTTCAAAATCAGGCTGGACTGGGCATGGTGTCTGGTGGCATATTATCTAGAGAGGCCATaGGCTAGGAAGAGAACGGAG +
Preference number: 4 (lower is better)
Translates to: HESCFKIRLDWAWCLVAYYLERP*ARKRTE
Trigger: CTCCGTTCTCTTCCTAGCTCATGGCCTCTCTAGATA...ATATGCCACCAGACACCATGCCCAGTCCAGCCTGATTTTGAAACAACTTTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR TCA 90 bp CGTAGGTTACTTGAGCAGGAAAGGTCAAAGCTGGGGATGGAGAGATACAGGCTGTGCAAAATAGCAAGGTaGCAACAGGGAATTTGCCAT +
Preference number: 4 (lower is better)
Translates to: RRLLEQERSKLGMERYRLCKIAR*QQGICH
Trigger: ATGGCAAATTCCCTGTTGTCACCTTGCTATTTTGCA...CAGCCTGTATCTCTCCATCCCCAGCTTTGACCTTTCCTGCTCAAGTAACCTACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR GCA 90 bp AAGACCGGCATGAAAGTTGTTTCAAAATCAGGCTGGACTGGGCATGGTGTCTGGCTTTCGAATCTCAGCTaGCGAAACATGTGTTCCAGA +
Preference number: 4 (lower is better)
Translates to: KTGMKVVSKSGWTGHGVWLSNLS*RNMCSR
Trigger: TCTGGAACACATGTTTCGGCAGCTGAGATTCGAAAG...CCAGACACCATGCCCAGTCCAGCCTGATTTTGAAACAACTTTCATGCCGGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR GCA 90 bp CATGAAAGTTGTTTCAAAATCAGGCTGGACTGGGCATGGTGTCTGGTGGCATATCGGGAATCGATGGCCTaGTGGAATTTTTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: HESCFKIRLDWAWCLVAYRESMA*WNFSSS
Trigger: AGAGCTGGAAAAATTCCAGCAGGCCATCGATTCCCG...ATATGCCACCAGACACCATGCCCAGTCCAGCCTGATTTTGAAACAACTTTCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR GCA 90 bp TGTGCCCGTAGGTTACTTGAGCAGGAAAGGTCAAAGCTGGGGATGGAGAGATACGTCAAACCTTGTCCTTaGCTCTGTCTTACTGTATTG +
Preference number: 4 (lower is better)
Translates to: CARRLLEQERSKLGMERYVKPCP*LCLTVL
Trigger: CAATACAGTAAGACAGAGGCAAGGACAAGGTTTGAC...GTATCTCTCCATCCCCAGCTTTGACCTTTCCTGCTCAAGTAACCTACGGGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR CCA 90 bp AAGACCGGCATGAAAGTTGTTTCAAAATCAGGCTGGACTGGGCATGGTGTCTGGTGTATCCCTCTACCGTaGAATAAACGTGCAAGGCAT +
Preference number: 4 (lower is better)
Translates to: KTGMKVVSKSGWTGHGVWCIPLP*NKRARH
Trigger: ATGCCTTGCACGTTTATTCCACGGTAGAGGGATACA...CCAGACACCATGCCCAGTCCAGCCTGATTTTGAAACAACTTTCATGCCGGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR CCA 90 bp CAGAGAGGCAAGGGAGGAAGTTGGTTGCAAAGATGCAGATATGAGAAGCTGAGGGGTAGATGGCAAAATTaGAAGGGTGTGAGAGATCCT +
Preference number: 4 (lower is better)
Translates to: QRGKGGSWLQRCRYEKLRGRWQN*KGVRDP
Trigger: AGGATCTCTCACACCCTTCCAATTTTGCCATCTACC...CCTCAGCTTCTCATATCTGCATCTTTGCAACCAACTTCCTCCCTTGCCTCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR GCA 90 bp CAGAGAGGCAAGGGAGGAAGTTGGTTGCAAAGATGCAGATATGAGAAGCTGAGGAGGGTTCGTTTTCCTTaGTTTTCCTTCTTGAACCAG +
Preference number: 4 (lower is better)
Translates to: QRGKGGSWLQRCRYEKLRRVRFP*FSFLNQ
Trigger: CTGGTTCAAGAAGGAAAAGCAAGGAAAACGAACCCT...CCTCAGCTTCTCATATCTGCATCTTTGCAACCAACTTCCTCCCTTGCCTCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR GCA 90 bp CGTAGGTTACTTGAGCAGGAAAGGTCAAAGCTGGGGATGGAGAGATACAGGCTGGCTTTATCCAGTTTCTaGTTCATGGGAGAAAGAAGA +
Preference number: 4 (lower is better)
Translates to: RRLLEQERSKLGMERYRLALSSF*FMGERR
Trigger: TCTTCTTTCTCCCATGAAGCAGAAACTGGATAAAGC...CAGCCTGTATCTCTCCATCCCCAGCTTTGACCTTTCCTGCTCAAGTAACCTACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR CCA 90 bp ACAGTAACATGTCAGGGAAGAGAAGACCGGCATGAAAGTTGTTTCAAAATCAGGTTAGCTCGCAGGGCCTaGCAGTTCTTGTTGTTCAGG +
Preference number: 4 (lower is better)
Translates to: TVTCQGREDRHESCFKIRLARRA*QFLLFR
Trigger: CCTGAACAACAAGAACTGCCAGGCCCTGCGAGCTAA...CCTGATTTTGAAACAACTTTCATGCCGGTCTTCTCTTCCCTGACATGTTACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR CCA 90 bp CATGAAAGTTGTTTCAAAATCAGGCTGGACTGGGCATGGTGTCTGGTGGCATATACATCCACCAGGGTCTaGATAAAGCATGAGCCTTTC +
Preference number: 4 (lower is better)
Translates to: HESCFKIRLDWAWCLVAYTSTRV*IKHEPF
Trigger: GAAAGGCTCATGCTTTATCCAGACCCTGGTGGATGT...ATATGCCACCAGACACCATGCCCAGTCCAGCCTGATTTTGAAACAACTTTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR CCA 90 bp CATGAAAGTTGTTTCAAAATCAGGCTGGACTGGGCATGGTGTCTGGTGGCATATGAAAGAACTGGAAGTTaGGAATGCATTGGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: HESCFKIRLDWAWCLVAYERTGS*ECIGLR
Trigger: CCTGAGGCCAATGCATTCCCAACTTCCAGTTCTTTC...ATATGCCACCAGACACCATGCCCAGTCCAGCCTGATTTTGAAACAACTTTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR CCA 90 bp CGTAGGTTACTTGAGCAGGAAAGGTCAAAGCTGGGGATGGAGAGATACAGGCTGGGAGGTAACCTTGGCTaGTGGTTATTGAAAATTTCT +
Preference number: 4 (lower is better)
Translates to: RRLLEQERSKLGMERYRLGGNLG*WLLKIS
Trigger: AGAAATTTTCAATAACCACCAGCCAAGGTTACCTCC...CAGCCTGTATCTCTCCATCCCCAGCTTTGACCTTTCCTGCTCAAGTAACCTACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427043.4
3UTR CAA 72 bp AGGTTGTGGAAAAGAGGCTGGGCTGGAAGTCAAACCTaGTCCTTGCCTCTGTCTTACTGTATTGCATTTGAC +
Preference number: 4 (lower is better)
Translates to: RLWKRGWAGSQT*SLPLSYCIAFD
Trigger: GTCAAATGCAATACAGTAAGACAGAGGCAAGGACAAGGTTTGACTTCCAGCCCAGCCTCTTTTCCACAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR TCA 90 bp TGTGCCCGTAGGTTACTTGAGCAGGAAAGGTCAAAGCTGGGGATGGAGAGATACTTGGCTGGTGGTTATTaGAAATTTCTAGAAACTTCC +
Preference number: 4 (lower is better)
Translates to: CARRLLEQERSKLGMERYLAGGY*KFLETS
Trigger: GGAAGTTTCTAGAAATTTTCAATAACCACCAGCCAA...GTATCTCTCCATCCCCAGCTTTGACCTTTCCTGCTCAAGTAACCTACGGGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR TCA 90 bp AAGACCGGCATGAAAGTTGTTTCAAAATCAGGCTGGACTGGGCATGGTGTCTGGGCCTTTTTGAAAGAGTaGATTCATGGTGGAAGAGAT +
Preference number: 4 (lower is better)
Translates to: KTGMKVVSKSGWTGHGVWAFLKE*IHGGRD
Trigger: ATCTCTTCCACCATGAATTCACTCTTTCAAAAAGGC...CCAGACACCATGCCCAGTCCAGCCTGATTTTGAAACAACTTTCATGCCGGTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR GCA 90 bp GTAACATGTCAGGGAAGAGAAGACCGGCATGAAAGTTGTTTCAAAATCAGGCTGCCAAAGACCGCGGATTaGTCATTTCTCCTTTGGTTG +
Preference number: 4 (lower is better)
Translates to: VTCQGREDRHESCFKIRLPKTAD*SFLLWL
Trigger: CAACCAAAGGAGAAATGAGCAATCCGCGGTCTTTGG...CAGCCTGATTTTGAAACAACTTTCATGCCGGTCTTCTCTTCCCTGACATGTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR CCA 90 bp ACAGTAACATGTCAGGGAAGAGAAGACCGGCATGAAAGTTGTTTCAAAATCAGGCTTCCCGGGAATCGATaGCCTGCTGGAATTTTTCCA +
Preference number: 4 (lower is better)
Translates to: TVTCQGREDRHESCFKIRLPGNR*PAGIFP
Trigger: TGGAAAAATTCCAGCAGGCCATCGATTCCCGGGAAG...CCTGATTTTGAAACAACTTTCATGCCGGTCTTCTCTTCCCTGACATGTTACTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR CCA 90 bp ACAGTAACATGTCAGGGAAGAGAAGACCGGCATGAAAGTTGTTTCAAAATCAGGGTTTCAAAATCAGGCTaGACTGGGCATGGTGTCTGG +
Preference number: 4 (lower is better)
Translates to: TVTCQGREDRHESCFKIRVSKSG*TGHGVW
Trigger: CCAGACACCATGCCCAGTCCAGCCTGATTTTGAAAC...CCTGATTTTGAAACAACTTTCATGCCGGTCTTCTCTTCCCTGACATGTTACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR GCA 90 bp GTAACATGTCAGGGAAGAGAAGACCGGCATGAAAGTTGTTTCAAAATCAGGCTGAGTTGGTTGCAAAGATaGAGATATGAGAAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: VTCQGREDRHESCFKIRLSWLQR*RYEKLR
Trigger: CCTCAGCTTCTCATATCTGCATCTTTGCAACCAACT...CAGCCTGATTTTGAAACAACTTTCATGCCGGTCTTCTCTTCCCTGACATGTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR CCA 90 bp GTCAAACCTTGTCCTTGCCTCTGTCTTACTGTATTGCATTTGACAAATTATTTATTGCCAATACTGAGCTaGGCACCGAGGAGGAGTCAG +
Preference number: 4 (lower is better)
Translates to: VKPCPCLCLTVLHLTNYLLPILS*APRRSQ
Trigger: CTGACTCCTCCTCGGTGCCCAGCTCAGTATTGGCAA...TAAATAATTTGTCAAATGCAATACAGTAAGACAGAGGCAAGGACAAGGTTTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR CCA 90 bp ACAGTAACATGTCAGGGAAGAGAAGACCGGCATGAAAGTTGTTTCAAAATCAGGAGAGTGAATTCATGGTaGAAGAGATGGGAGATGGGT +
Preference number: 4 (lower is better)
Translates to: TVTCQGREDRHESCFKIRRVNSW*KRWEMG
Trigger: ACCCATCTCCCATCTCTTCCACCATGAATTCACTCT...CCTGATTTTGAAACAACTTTCATGCCGGTCTTCTCTTCCCTGACATGTTACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR TCA 90 bp GTAACATGTCAGGGAAGAGAAGACCGGCATGAAAGTTGTTTCAAAATCAGGCTGAAGAGAAGACCGGCATaGAAGTTGTTTCAAAATCAG +
Preference number: 4 (lower is better)
Translates to: VTCQGREDRHESCFKIRLKRRPA*KLFQNQ
Trigger: CTGATTTTGAAACAACTTTCATGCCGGTCTTCTCTT...CAGCCTGATTTTGAAACAACTTTCATGCCGGTCTTCTCTTCCCTGACATGTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR GCA 90 bp GTCAAACCTTGTCCTTGCCTCTGTCTTACTGTATTGCATTTGACAAATTATTTAAGCTCTTCCTGGAATTaGTCGGCAGTGGGGTCTCTT +
Preference number: 4 (lower is better)
Translates to: VKPCPCLCLTVLHLTNYLSSSWN*SAVGSL
Trigger: AAGAGACCCCACTGCCGAGCAATTCCAGGAAGAGCT...TAAATAATTTGTCAAATGCAATACAGTAAGACAGAGGCAAGGACAAGGTTTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR GCA 90 bp GTCAAACCTTGTCCTTGCCTCTGTCTTACTGTATTGCATTTGACAAATTATTTAACTGGAAGTTGGGAATaGATTGGCCTCAGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: VKPCPCLCLTVLHLTNYLTGSWE*IGLRRR
Trigger: CCTCCTCCTGAGGCCAATGCATTCCCAACTTCCAGT...TAAATAATTTGTCAAATGCAATACAGTAAGACAGAGGCAAGGACAAGGTTTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR GCA 90 bp CATGAAAGTTGTTTCAAAATCAGGCTGGACTGGGCATGGTGTCTGGTGGCATATATTGAACACTCATTATaGAGATTAAGGGCTTGTTCC +
Preference number: 4 (lower is better)
Translates to: HESCFKIRLDWAWCLVAYIEHSL*RLRACS
Trigger: GGAACAAGCCCTTAATCTGCATAATGAGTGTTCAAT...ATATGCCACCAGACACCATGCCCAGTCCAGCCTGATTTTGAAACAACTTTCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR CCA 90 bp GTCAAACCTTGTCCTTGCCTCTGTCTTACTGTATTGCATTTGACAAATTATTTAGGAATTGCTCGGCAGTaGGGTCTCTTTTCATGGTGC +
Preference number: 4 (lower is better)
Translates to: VKPCPCLCLTVLHLTNYLGIARQ*GLFSWC
Trigger: GCACCATGAAAAGAGACCCCACTGCCGAGCAATTCC...TAAATAATTTGTCAAATGCAATACAGTAAGACAGAGGCAAGGACAAGGTTTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR CCA 90 bp GTAACATGTCAGGGAAGAGAAGACCGGCATGAAAGTTGTTTCAAAATCAGGCTGAAGGAGGAGTGGTTTTaGAGAGAAAGAATGGTTCTT +
Preference number: 4 (lower is better)
Translates to: VTCQGREDRHESCFKIRLKEEWF*RERMVL
Trigger: AAGAACCATTCTTTCTCTCCAAAACCACTCCTCCTT...CAGCCTGATTTTGAAACAACTTTCATGCCGGTCTTCTCTTCCCTGACATGTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR CCA 90 bp GTCAAACCTTGTCCTTGCCTCTGTCTTACTGTATTGCATTTGACAAATTATTTAAGGCTGGACTGGGCATaGTGTCTGGTGGCATATGAA +
Preference number: 4 (lower is better)
Translates to: VKPCPCLCLTVLHLTNYLRLDWA*CLVAYE
Trigger: TTCATATGCCACCAGACACCATGCCCAGTCCAGCCT...TAAATAATTTGTCAAATGCAATACAGTAAGACAGAGGCAAGGACAAGGTTTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR CCA 90 bp CATGAAAGTTGTTTCAAAATCAGGCTGGACTGGGCATGGTGTCTGGTGGCATATCACTGTCCAGTACCCTaGTCTTTAAATAATATGGTA +
Preference number: 4 (lower is better)
Translates to: HESCFKIRLDWAWCLVAYHCPVP*SLNNMV
Trigger: TACCATATTATTTAAAGACCAGGGTACTGGACAGTG...ATATGCCACCAGACACCATGCCCAGTCCAGCCTGATTTTGAAACAACTTTCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR CCA 90 bp GTAACATGTCAGGGAAGAGAAGACCGGCATGAAAGTTGTTTCAAAATCAGGCTGGGTAACCTTGGCTGGTaGTTATTGAAAATTTCTAGA +
Preference number: 4 (lower is better)
Translates to: VTCQGREDRHESCFKIRLGNLGW*LLKISR
Trigger: TCTAGAAATTTTCAATAACCACCAGCCAAGGTTACC...CAGCCTGATTTTGAAACAACTTTCATGCCGGTCTTCTCTTCCCTGACATGTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR TCA 90 bp GTCAAACCTTGTCCTTGCCTCTGTCTTACTGTATTGCATTTGACAAATTATTTATTGACTGCAGAAATCTaGACCTGGGATCTGAGGTTG +
Preference number: 4 (lower is better)
Translates to: VKPCPCLCLTVLHLTNYLLTAEI*TWDLRL
Trigger: CAACCTCAGATCCCAGGTTCAGATTTCTGCAGTCAA...TAAATAATTTGTCAAATGCAATACAGTAAGACAGAGGCAAGGACAAGGTTTGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR TCA 90 bp GTCAAACCTTGTCCTTGCCTCTGTCTTACTGTATTGCATTTGACAAATTATTTAGCAAAGATGCAGATATaGGAAGCTGAGGACTTGAGC +
Preference number: 4 (lower is better)
Translates to: VKPCPCLCLTVLHLTNYLAKMQI*EAEDLS
Trigger: GCTCAAGTCCTCAGCTTCTCATATCTGCATCTTTGC...TAAATAATTTGTCAAATGCAATACAGTAAGACAGAGGCAAGGACAAGGTTTGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR GCA 90 bp GTCAAACCTTGTCCTTGCCTCTGTCTTACTGTATTGCATTTGACAAATTATTTAGGTCTCTTTTCATGGTaGTTTCGAATCTCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: VKPCPCLCLTVLHLTNYLGLFSW*FRISAA
Trigger: GGCAGCTGAGATTCGAAAGCACCATGAAAAGAGACC...TAAATAATTTGTCAAATGCAATACAGTAAGACAGAGGCAAGGACAAGGTTTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR GCA 90 bp GTCAAACCTTGTCCTTGCCTCTGTCTTACTGTATTGCATTTGACAAATTATTTATCTTTCTACTTCTACTaGAGATACAGCCGTTTCCGG +
Preference number: 4 (lower is better)
Translates to: VKPCPCLCLTVLHLTNYLSFYFY*RYSRFR
Trigger: CCGGAAACGGCTGTATCTGCAGTAGAAGTAGAAAGA...TAAATAATTTGTCAAATGCAATACAGTAAGACAGAGGCAAGGACAAGGTTTGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR CCA 90 bp GTCAAACCTTGTCCTTGCCTCTGTCTTACTGTATTGCATTTGACAAATTATTTACTAAGTGCTGGTAGATaGCAAAATTGGAAGGGTGTG +
Preference number: 4 (lower is better)
Translates to: VKPCPCLCLTVLHLTNYLLSAGR*QNWKGV
Trigger: CACACCCTTCCAATTTTGCCATCTACCAGCACTTAG...TAAATAATTTGTCAAATGCAATACAGTAAGACAGAGGCAAGGACAAGGTTTGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR CCA 90 bp GTCAAACCTTGTCCTTGCCTCTGTCTTACTGTATTGCATTTGACAAATTATTTATCATGGTGGAAGAGATaGGAGATGGGTTTAGCTAAG +
Preference number: 4 (lower is better)
Translates to: VKPCPCLCLTVLHLTNYLSWWKR*EMGLAK
Trigger: CTTAGCTAAACCCATCTCCCATCTCTTCCACCATGA...TAAATAATTTGTCAAATGCAATACAGTAAGACAGAGGCAAGGACAAGGTTTGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR CCA 90 bp GTCAAACCTTGTCCTTGCCTCTGTCTTACTGTATTGCATTTGACAAATTATTTACCTTGTGCTAAGTTTTaGCTGGCTTGCTCTAATAAG +
Preference number: 4 (lower is better)
Translates to: VKPCPCLCLTVLHLTNYLPCAKF*LACSNK
Trigger: CTTATTAGAGCAAGCCAGCCAAAACTTAGCACAAGG...TAAATAATTTGTCAAATGCAATACAGTAAGACAGAGGCAAGGACAAGGTTTGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR CCA 90 bp GTCAAACCTTGTCCTTGCCTCTGTCTTACTGTATTGCATTTGACAAATTATTTAGGGATGAGTGGGCTTTaGTTTGTCTATGGAAAATCT +
Preference number: 4 (lower is better)
Translates to: VKPCPCLCLTVLHLTNYLGMSGL*FVYGKS
Trigger: AGATTTTCCATAGACAAACCAAAGCCCACTCATCCC...TAAATAATTTGTCAAATGCAATACAGTAAGACAGAGGCAAGGACAAGGTTTGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS GCA 90 bp ACCACGAAGGCACAACTGACGGGATCTTCCCGGGAATCGATGGCCTaGTGGAATTTTTCCAGCTCTTCCTGGAATTGCTCGGCAGTGGGG +
Preference number: 5 (lower is better)
Translates to: TTKAQLTGSSRESMA*WNFSSSSWNCSAVG
Trigger: CCCCACTGCCGAGCAATTCCAGGAAGAGCTGGAAAAATTCCAGCAGGCCATCGATTCCCGGGAAGATCCCGTCAGTTGTGCCTTCGTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS CCA 90 bp ACGAAGGCACAACTGACGGGATCTTCCCGGGAATCGATGGCCTGCTaGAATTTTTCCAGCTCTTCCTGGAATTGCTCGGCAGTGGGGTCT +
Preference number: 5 (lower is better)
Translates to: TKAQLTGSSRESMAC*NFSSSSWNCSAVGS
Trigger: AGACCCCACTGCCGAGCAATTCCAGGAAGAGCTGGAAAAATTCCAGCAGGCCATCGATTCCCGGGAAGATCCCGTCAGTTGTGCCTTCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS CCA 90 bp CGACAGGCCTGTATGATGTACACCTTGGGCTTAGCTCGCAGGGCCTaGCAGTTCTTGTTGTTCAGGGCCTCGAAGAGATTCTCCAGCTTG +
Preference number: 5 (lower is better)
Translates to: RQACMMYTLGLARRA*QFLLFRASKRFSSL
Trigger: CAAGCTGGAGAATCTCTTCGAGGCCCTGAACAACAAGAACTGCCAGGCCCTGCGAGCTAAGCCCAAGGTGTACATCATACAGGCCTGTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR CAA 90 bp TGTGCCCGTAGGTTACTTGAGCAGGAAAGGTCAAAGCTGGGGATGGAGAGATACAGGAGCCAGCAGAGGTaGGATTGGGGTAGGAGGGGA +
Preference number: 5 (lower is better)
Translates to: CARRLLEQERSKLGMERYRSQQR*DWGRRG
Trigger: TCCCCTCCTACCCCAATCCAACCTCTGCTGGCTCCT...GTATCTCTCCATCCCCAGCTTTGACCTTTCCTGCTCAAGTAACCTACGGGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR CAA 90 bp GCCCTCCAGCTTGGGGGAAATGGTGATAGCAAAGGCTTAGAGGCAAGGGTGAGTACCTGGGATCTGAGGTaGAGGATACCAGGGAACGCT +
Preference number: 5 (lower is better)
Translates to: ALQLGGNGDSKGLEARVSTWDLR*RIPGNA
Trigger: AGCGTTCCCTGGTATCCTCAACCTCAGATCCCAGGT...ACTCACCCTTGCCTCTAAGCCTTTGCTATCACCATTTCCCCCAAGCTGGAGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR CAA 90 bp GGAGAGATACAGGCTGTAGAGTTGGAAGATAGTGAAGCCGATCTGACTTCCAGCGGAGGGCCCTCCAGCTaGGGGGAAATGGTGATAGCA +
Preference number: 5 (lower is better)
Translates to: GEIQAVELEDSEADLTSSGGPSS*GEMVIA
Trigger: TGCTATCACCATTTCCCCCAAGCTGGAGGGCCCTCC...GCTGGAAGTCAGATCGGCTTCACTATCTTCCAACTCTACAGCCTGTATCTCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS TCA 90 bp GTTCCAGAGCATCCAGGTCTTCTTCGGAACCTTCCCGGGCTTTGGTaGCACACAGTATTAGGGCCAGGCGGGCACCTGACATATCATATT +
Preference number: 5 (lower is better)
Translates to: VPEHPGLLRNLPGLW*HTVLGPGGHLTYHI
Trigger: AATATGATATGTCAGGTGCCCGCCTGGCCCTAATACTGTGTGTCACCAAAGCCCGGGAAGGTTCCGAAGAAGACCTGGATGCTCTGGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR CAA 90 bp GGAGAGATACAGGCTGTAGAGTTGGAAGATAGTGAAGCCGATCTGACTTCCAGCGCCCACGTACTGATCTaGGAGAAGGGGCTGACAGTG +
Preference number: 5 (lower is better)
Translates to: GEIQAVELEDSEADLTSSAHVLI*EKGLTV
Trigger: CACTGTCAGCCCCTTCTCCAAGATCAGTACGTGGGC...GCTGGAAGTCAGATCGGCTTCACTATCTTCCAACTCTACAGCCTGTATCTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS GCA 90 bp TGCTCGGCAGTGGGGTCTCTTTTCATGGTGCTTTCGAATCTCAGCTaGCGAAACATGTGTTCCAGAGCATCCAGGTCTTCTTCGGAACCT +
Preference number: 5 (lower is better)
Translates to: CSAVGSLFMVLSNLS*RNMCSRASRSSSEP
Trigger: AGGTTCCGAAGAAGACCTGGATGCTCTGGAACACATGTTTCGGCAGCTGAGATTCGAAAGCACCATGAAAAGAGACCCCACTGCCGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS GCA 90 bp CCAGCTCTTCCTGGAATTGCTCGGCAGTGGGGTCTCTTTTCATGGTaGTTTCGAATCTCAGCTGCCGAAACATGTGTTCCAGAGCATCCA +
Preference number: 5 (lower is better)
Translates to: PALPGIARQWGLFSW*FRISAAETCVPEHP
Trigger: TGGATGCTCTGGAACACATGTTTCGGCAGCTGAGATTCGAAAGCACCATGAAAAGAGACCCCACTGCCGAGCAATTCCAGGAAGAGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR CAA 90 bp CAGAGAGGCAAGGGAGGAAGTTGGTTGCAAAGATGCAGATATGAGAAGCTGAGGCGGCTCTCAGCACCCTaGTCTGATCCAACTCTAGAG +
Preference number: 5 (lower is better)
Translates to: QRGKGGSWLQRCRYEKLRRLSAP*SDPTLE
Trigger: CTCTAGAGTTGGATCAGACAAGGGTGCTGAGAGCCG...CCTCAGCTTCTCATATCTGCATCTTTGCAACCAACTTCCTCCCTTGCCTCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR CAA 90 bp CAGAGAGGCAAGGGAGGAAGTTGGTTGCAAAGATGCAGATATGAGAAGCTGAGGGCCTGGCAGTTCTTGTaGTTCAGGGCCTCGAAGAGA +
Preference number: 5 (lower is better)
Translates to: QRGKGGSWLQRCRYEKLRAWQFL*FRASKR
Trigger: TCTCTTCGAGGCCCTGAACAACAAGAACTGCCAGGC...CCTCAGCTTCTCATATCTGCATCTTTGCAACCAACTTCCTCCCTTGCCTCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR CAA 90 bp AAGACCGGCATGAAAGTTGTTTCAAAATCAGGCTGGACTGGGCATGGTGTCTGGTGTATGATGTACACCTaGGGCTTAGCTCGCAGGGCC +
Preference number: 5 (lower is better)
Translates to: KTGMKVVSKSGWTGHGVWCMMYT*GLARRA
Trigger: GGCCCTGCGAGCTAAGCCCAAGGTGTACATCATACA...CCAGACACCATGCCCAGTCCAGCCTGATTTTGAAACAACTTTCATGCCGGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR CAA 90 bp CATGAAAGTTGTTTCAAAATCAGGCTGGACTGGGCATGGTGTCTGGTGGCATATTTCACCGGGGTCCCTTaGTTCTCCTCGACAGGCCTG +
Preference number: 5 (lower is better)
Translates to: HESCFKIRLDWAWCLVAYFTGVP*FSSTGL
Trigger: CAGGCCTGTCGAGGAGAACAAAGGGACCCCGGTGAA...ATATGCCACCAGACACCATGCCCAGTCCAGCCTGATTTTGAAACAACTTTCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR CAA 90 bp AAGACCGGCATGAAAGTTGTTTCAAAATCAGGCTGGACTGGGCATGGTGTCTGGGGGTGCCATTTGGCCTaGGGAACAGAAGATCTTGGG +
Preference number: 5 (lower is better)
Translates to: KTGMKVVSKSGWTGHGVWGCHLA*GTEDLG
Trigger: CCCAAGATCTTCTGTTCCCAAGGCCAAATGGCACCC...CCAGACACCATGCCCAGTCCAGCCTGATTTTGAAACAACTTTCATGCCGGTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR CAA 90 bp CGTAGGTTACTTGAGCAGGAAAGGTCAAAGCTGGGGATGGAGAGATACAGGCTGTTGCTCATTTCTCCTTaGGTTGTGAGTCCCGGCTCT +
Preference number: 5 (lower is better)
Translates to: RRLLEQERSKLGMERYRLLLISP*VVSPGS
Trigger: AGAGCCGGGACTCACAACCAAAGGAGAAATGAGCAA...CAGCCTGTATCTCTCCATCCCCAGCTTTGACCTTTCCTGCTCAAGTAACCTACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR CAA 90 bp CGTAGGTTACTTGAGCAGGAAAGGTCAAAGCTGGGGATGGAGAGATACAGGCTGGGAAAGAACTGGAAGTaGGGAATGCATTGGCCTCAG +
Preference number: 5 (lower is better)
Translates to: RRLLEQERSKLGMERYRLGKNWK*GMHWPQ
Trigger: CTGAGGCCAATGCATTCCCAACTTCCAGTTCTTTCC...CAGCCTGTATCTCTCCATCCCCAGCTTTGACCTTTCCTGCTCAAGTAACCTACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR CAA 90 bp CGTAGGTTACTTGAGCAGGAAAGGTCAAAGCTGGGGATGGAGAGATACAGGCTGTCAGGATTTAGCAGGTaGTGGAAAAGAGGCTGGGCT +
Preference number: 5 (lower is better)
Translates to: RRLLEQERSKLGMERYRLSGFSR*WKRGWA
Trigger: AGCCCAGCCTCTTTTCCACAACCTGCTAAATCCTGA...CAGCCTGTATCTCTCCATCCCCAGCTTTGACCTTTCCTGCTCAAGTAACCTACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR CAA 90 bp AAGACCGGCATGAAAGTTGTTTCAAAATCAGGCTGGACTGGGCATGGTGTCTGGCATGATCATAGCTCCTaGCAGCCTCAAACTCCTGGG +
Preference number: 5 (lower is better)
Translates to: KTGMKVVSKSGWTGHGVWHDHSS*QPQTPG
Trigger: CCCAGGAGTTTGAGGCTGCAAGGAGCTATGATCATG...CCAGACACCATGCCCAGTCCAGCCTGATTTTGAAACAACTTTCATGCCGGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS CCA 90 bp TTTCCAGCTCTTCCTGGAATTGCTCGGCAGTGGGGTCTCTTTTCATaGTGCTTTCGAATCTCAGCTGCCGAAACATGTGTTCCAGAGCAT +
Preference number: 5 (lower is better)
Translates to: FPALPGIARQWGLFS*CFRISAAETCVPEH
Trigger: ATGCTCTGGAACACATGTTTCGGCAGCTGAGATTCGAAAGCACCATGAAAAGAGACCCCACTGCCGAGCAATTCCAGGAAGAGCTGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR CAA 90 bp CGTAGGTTACTTGAGCAGGAAAGGTCAAAGCTGGGGATGGAGAGATACAGGCTGAAGAGATTCTCCAGCTaGACCATCTCCCCATCTTCT +
Preference number: 5 (lower is better)
Translates to: RRLLEQERSKLGMERYRLKRFSS*TISPSS
Trigger: AGAAGATGGGGAGATGGTCAAGCTGGAGAATCTCTT...CAGCCTGTATCTCTCCATCCCCAGCTTTGACCTTTCCTGCTCAAGTAACCTACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR CAA 90 bp GTAACATGTCAGGGAAGAGAAGACCGGCATGAAAGTTGTTTCAAAATCAGGCTGAGGGCCTGGCAGTTCTaGTTGTTCAGGGCCTCGAAG +
Preference number: 5 (lower is better)
Translates to: VTCQGREDRHESCFKIRLRAWQF*LFRASK
Trigger: CTTCGAGGCCCTGAACAACAAGAACTGCCAGGCCCT...CAGCCTGATTTTGAAACAACTTTCATGCCGGTCTTCTCTTCCCTGACATGTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR CAA 90 bp AAGACCGGCATGAAAGTTGTTTCAAAATCAGGCTGGACTGGGCATGGTGTCTGGAGGCATCTGTGTATGTaGGGATGGTTTGTGGGCTGT +
Preference number: 5 (lower is better)
Translates to: KTGMKVVSKSGWTGHGVWRHLCM*GWFVGC
Trigger: ACAGCCCACAAACCATCCCAACATACACAGATGCCT...CCAGACACCATGCCCAGTCCAGCCTGATTTTGAAACAACTTTCATGCCGGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR CAA 90 bp TGTGCCCGTAGGTTACTTGAGCAGGAAAGGTCAAAGCTGGGGATGGAGAGATACTTTCCGGAGGGTGCTTaGGATTTCAGGGTTCGTTTT +
Preference number: 5 (lower is better)
Translates to: CARRLLEQERSKLGMERYFPEGA*DFRVRF
Trigger: AAAACGAACCCTGAAATCCAAAGCACCCTCCGGAAA...GTATCTCTCCATCCCCAGCTTTGACCTTTCCTGCTCAAGTAACCTACGGGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR CAA 90 bp TGTGCCCGTAGGTTACTTGAGCAGGAAAGGTCAAAGCTGGGGATGGAGAGATACGAGGTGATGTTAATGTaGCCACCATGCCTTGTGCTA +
Preference number: 5 (lower is better)
Translates to: CARRLLEQERSKLGMERYEVMLM*PPCLVL
Trigger: TAGCACAAGGCATGGTGGCAACATTAACATCACCTC...GTATCTCTCCATCCCCAGCTTTGACCTTTCCTGCTCAAGTAACCTACGGGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR CAA 90 bp AAGACCGGCATGAAAGTTGTTTCAAAATCAGGCTGGACTGGGCATGGTGTCTGGTCCAAAGACCGCGGATaGCTCATTTCTCCTTTGGTT +
Preference number: 5 (lower is better)
Translates to: KTGMKVVSKSGWTGHGVWSKDRG*LISPLV
Trigger: AACCAAAGGAGAAATGAGCAATCCGCGGTCTTTGGA...CCAGACACCATGCCCAGTCCAGCCTGATTTTGAAACAACTTTCATGCCGGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR CAA 90 bp ACAGTAACATGTCAGGGAAGAGAAGACCGGCATGAAAGTTGTTTCAAAATCAGGCAGCTCTTCCTGGAATaGCTCGGCAGTGGGGTCTCT +
Preference number: 5 (lower is better)
Translates to: TVTCQGREDRHESCFKIRQLFLE*LGSGVS
Trigger: AGAGACCCCACTGCCGAGCAATTCCAGGAAGAGCTG...CCTGATTTTGAAACAACTTTCATGCCGGTCTTCTCTTCCCTGACATGTTACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR CAA 90 bp TGTGCCCGTAGGTTACTTGAGCAGGAAAGGTCAAAGCTGGGGATGGAGAGATACCAGGGTTCGTTTTCCTaGCTTTTCCTTCTTGAACCA +
Preference number: 5 (lower is better)
Translates to: CARRLLEQERSKLGMERYQGSFS*LFLLEP
Trigger: TGGTTCAAGAAGGAAAAGCAAGGAAAACGAACCCTG...GTATCTCTCCATCCCCAGCTTTGACCTTTCCTGCTCAAGTAACCTACGGGCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR CAA 90 bp CGTAGGTTACTTGAGCAGGAAAGGTCAAAGCTGGGGATGGAGAGATACAGGCTGATACAGGCTGTAGAGTaGGAAGATAGTGAAGCCGAT +
Preference number: 5 (lower is better)
Translates to: RRLLEQERSKLGMERYRLIQAVE*EDSEAD
Trigger: ATCGGCTTCACTATCTTCCAACTCTACAGCCTGTAT...CAGCCTGTATCTCTCCATCCCCAGCTTTGACCTTTCCTGCTCAAGTAACCTACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR CAA 90 bp GTAACATGTCAGGGAAGAGAAGACCGGCATGAAAGTTGTTTCAAAATCAGGCTGGAACCTTCCCGGGCTTaGGTGACACACAGTATTAGG +
Preference number: 5 (lower is better)
Translates to: VTCQGREDRHESCFKIRLEPSRA*VTHSIR
Trigger: CCTAATACTGTGTGTCACCAAAGCCCGGGAAGGTTC...CAGCCTGATTTTGAAACAACTTTCATGCCGGTCTTCTCTTCCCTGACATGTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR CAA 90 bp AAGACCGGCATGAAAGTTGTTTCAAAATCAGGCTGGACTGGGCATGGTGTCTGGAATAGATGGATTTTCTaGGAGAGAGGGCAGAGTCCA +
Preference number: 5 (lower is better)
Translates to: KTGMKVVSKSGWTGHGVWNRWIF*ERGQSP
Trigger: TGGACTCTGCCCTCTCTCCAAGAAAATCCATCTATT...CCAGACACCATGCCCAGTCCAGCCTGATTTTGAAACAACTTTCATGCCGGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS GCA 90 bp CCTGGTCTTTCTACTTCTACTGCAGATACAGCCGTTTCCGGAGGGTaGTTTGGATTTCAGGGTTCGTTTTCCTTGCTTTTCCTTCTTGAA +
Preference number: 5 (lower is better)
Translates to: PGLSTSTADTAVSGG*FGFQGSFSLLFLLE
Trigger: TTCAAGAAGGAAAAGCAAGGAAAACGAACCCTGAAATCCAAAGCACCCTCCGGAAACGGCTGTATCTGCAGTAGAAGTAGAAAGACCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427043.4
ENST00000598738.1
CDS CCA 90 bp GTATCCCTCTACCGTGGAATAAACGTGCAAGGCATCTGTGTATGTTaGGATGGTTTGTGGGCTGTCTTTGATGACCATCACAATCTCATC +
Preference number: 5 (lower is better)
Translates to: VSLYRGINVQGICVC*DGLWAVFDDHHNLI
Trigger: GATGAGATTGTGATGGTCATCAAAGACAGCCCACAAACCATCCCAACATACACAGATGCCTTGCACGTTTATTCCACGGTAGAGGGATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427043.4
ENST00000598738.1
CDS-3UTR CAA 90 bp ACAGTAACATGTCAGGGAAGAGAAGACCGGCATGAAAGTTGTTTCAAAATCAGGGTGCCCGTAGGTTACTaGAGCAGGAAAGGTCAAAGC +
Preference number: 5 (lower is better)
Translates to: TVTCQGREDRHESCFKIRVPVGY*SRKGQS
Trigger: GCTTTGACCTTTCCTGCTCAAGTAACCTACGGGCAC...CCTGATTTTGAAACAACTTTCATGCCGGTCTTCTCTTCCCTGACATGTTACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR CAA 90 bp CATGAAAGTTGTTTCAAAATCAGGCTGGACTGGGCATGGTGTCTGGTGGCATATAGGCAAGGGAGGAAGTaGGTTGCAAAGATGCAGATA +
Preference number: 5 (lower is better)
Translates to: HESCFKIRLDWAWCLVAYRQGRK*VAKMQI
Trigger: TATCTGCATCTTTGCAACCAACTTCCTCCCTTGCCT...ATATGCCACCAGACACCATGCCCAGTCCAGCCTGATTTTGAAACAACTTTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR CAA 90 bp CATGAAAGTTGTTTCAAAATCAGGCTGGACTGGGCATGGTGTCTGGTGGCATATCAAGGAGGAGTGGTTTaGGAGAGAAAGAATGGTTCT +
Preference number: 5 (lower is better)
Translates to: HESCFKIRLDWAWCLVAYQGGVV*ERKNGS
Trigger: AGAACCATTCTTTCTCTCCAAAACCACTCCTCCTTG...ATATGCCACCAGACACCATGCCCAGTCCAGCCTGATTTTGAAACAACTTTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR CAA 90 bp GGAGAGATACAGGCTGTAGAGTTGGAAGATAGTGAAGCCGATCTGACTTCCAGCCAGAAAGCTCCTACCTaGGAGATAGGGAAAATTTTT +
Preference number: 5 (lower is better)
Translates to: GEIQAVELEDSEADLTSSQKAPT*EIGKIF
Trigger: AAAAATTTTCCCTATCTCCAAGGTAGGAGCTTTCTG...GCTGGAAGTCAGATCGGCTTCACTATCTTCCAACTCTACAGCCTGTATCTCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR CAA 90 bp ACAGTAACATGTCAGGGAAGAGAAGACCGGCATGAAAGTTGTTTCAAAATCAGGGTATGTTGGGATGGTTaGTGGGCTGTCTTTGATGAC +
Preference number: 5 (lower is better)
Translates to: TVTCQGREDRHESCFKIRVCWDG*WAVFDD
Trigger: GTCATCAAAGACAGCCCACAAACCATCCCAACATAC...CCTGATTTTGAAACAACTTTCATGCCGGTCTTCTCTTCCCTGACATGTTACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR CAA 90 bp GTCAAACCTTGTCCTTGCCTCTGTCTTACTGTATTGCATTTGACAAATTATTTATGGGAACAGAAGATCTaGGGGAGAGGTAAGAGCTGC +
Preference number: 5 (lower is better)
Translates to: VKPCPCLCLTVLHLTNYLWEQKI*GRGKSC
Trigger: GCAGCTCTTACCTCTCCCCAAGATCTTCTGTTCCCA...TAAATAATTTGTCAAATGCAATACAGTAAGACAGAGGCAAGGACAAGGTTTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR CAA 90 bp GTCAAACCTTGTCCTTGCCTCTGTCTTACTGTATTGCATTTGACAAATTATTTAATGCAGATTAAGGGCTaGTTCCCTGCCCTCCAGAAG +
Preference number: 5 (lower is better)
Translates to: VKPCPCLCLTVLHLTNYLMQIKG*FPALQK
Trigger: CTTCTGGAGGGCAGGGAACAAGCCCTTAATCTGCAT...TAAATAATTTGTCAAATGCAATACAGTAAGACAGAGGCAAGGACAAGGTTTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR CAA 90 bp GTCAAACCTTGTCCTTGCCTCTGTCTTACTGTATTGCATTTGACAAATTATTTAGCTGGAAGTCAAACCTaGTCCTTGCCTCTGTCTTAC +
Preference number: 5 (lower is better)
Translates to: VKPCPCLCLTVLHLTNYLAGSQT*SLPLSY
Trigger: GTAAGACAGAGGCAAGGACAAGGTTTGACTTCCAGC...TAAATAATTTGTCAAATGCAATACAGTAAGACAGAGGCAAGGACAAGGTTTGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR CAA 90 bp ACAGTAACATGTCAGGGAAGAGAAGACCGGCATGAAAGTTGTTTCAAAATCAGGTGTCTATGGAAAATCTaGAGCTTTATCCAGTTTCTG +
Preference number: 5 (lower is better)
Translates to: TVTCQGREDRHESCFKIRCLWKI*SFIQFL
Trigger: CAGAAACTGGATAAAGCTCAAGATTTTCCATAGACA...CCTGATTTTGAAACAACTTTCATGCCGGTCTTCTCTTCCCTGACATGTTACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR CAA 90 bp GTCAAACCTTGTCCTTGCCTCTGTCTTACTGTATTGCATTTGACAAATTATTTAGTTTGTGGGCTGTCTTaGATGACCATCACAATCTCA +
Preference number: 5 (lower is better)
Translates to: VKPCPCLCLTVLHLTNYLVCGLS*MTITIS
Trigger: TGAGATTGTGATGGTCATCAAAGACAGCCCACAAAC...TAAATAATTTGTCAAATGCAATACAGTAAGACAGAGGCAAGGACAAGGTTTGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR CAA 90 bp GTCAAACCTTGTCCTTGCCTCTGTCTTACTGTATTGCATTTGACAAATTATTTAGTATGTTGTGTCTTCTaGAGTGTTCCAGGGAGATCA +
Preference number: 5 (lower is better)
Translates to: VKPCPCLCLTVLHLTNYLVCCVF*SVPGRS
Trigger: TGATCTCCCTGGAACACTCAAGAAGACACAACATAC...TAAATAATTTGTCAAATGCAATACAGTAAGACAGAGGCAAGGACAAGGTTTGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS-3UTR CAA 90 bp GTCAAACCTTGTCCTTGCCTCTGTCTTACTGTATTGCATTTGACAAATTATTTAAGTCAAACCTTGTCCTaGCCTCTGTCTTACTGTATT +
Preference number: 5 (lower is better)
Translates to: VKPCPCLCLTVLHLTNYLSQTLS*PLSYCI
Trigger: AATACAGTAAGACAGAGGCAAGGACAAGGTTTGACT...TAAATAATTTGTCAAATGCAATACAGTAAGACAGAGGCAAGGACAAGGTTTGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS CAA 90 bp ATACTGAGCTGGGCACCGAGGAGGAGTCAGGCCCACGTACTGATCTaGGAGAAGGGGCTGACAGTGTGGAATCTCCCGGGGTTTCTCCTG +
Preference number: 6 (lower is better)
Translates to: ILSWAPRRSQAHVLI*EKGLTVWNLPGFLL
Trigger: CAGGAGAAACCCCGGGAGATTCCACACTGTCAGCCCCTTCTCCAAGATCAGTACGTGGGCCTGACTCCTCCTCGGTGCCCAGCTCAGTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS CAA 90 bp CCGGGGTCCCTTTGTTCTCCTCGACAGGCCTGTATGATGTACACCTaGGGCTTAGCTCGCAGGGCCTGGCAGTTCTTGTTGTTCAGGGCC +
Preference number: 6 (lower is better)
Translates to: PGSLCSPRQACMMYT*GLARRAWQFLLFRA
Trigger: GGCCCTGAACAACAAGAACTGCCAGGCCCTGCGAGCTAAGCCCAAGGTGTACATCATACAGGCCTGTCGAGGAGAACAAAGGGACCCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS CCA 72 bp GCCCACGTACTGATCTTGGAGAAGGGGCTGACAGTGTaGAATCTCCCGGGGTTTCTCCTGAGAAGCCTGGTC +
Preference number: 6 (lower is better)
Translates to: AHVLILEKGLTV*NLPGFLLRSLV
Trigger: GACCAGGCTTCTCAGGAGAAACCCCGGGAGATTCCACACTGTCAGCCCCTTCTCCAAGATCAGTACGTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS CAA 72 bp AGAGCATCCAGGTCTTCTTCGGAACCTTCCCGGGCTTaGGTGACACACAGTATTAGGGCCAGGCGGGCACCT +
Preference number: 6 (lower is better)
Translates to: RASRSSSEPSRA*VTHSIRARRAP
Trigger: AGGTGCCCGCCTGGCCCTAATACTGTGTGTCACCAAAGCCCGGGAAGGTTCCGAAGAAGACCTGGATGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS CAA 72 bp ACCTTGGGCTTAGCTCGCAGGGCCTGGCAGTTCTTGTaGTTCAGGGCCTCGAAGAGATTCTCCAGCTTGACC +
Preference number: 6 (lower is better)
Translates to: TLGLARRAWQFL*FRASKRFSSLT
Trigger: GGTCAAGCTGGAGAATCTCTTCGAGGCCCTGAACAACAAGAACTGCCAGGCCCTGCGAGCTAAGCCCAAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS CAA 72 bp TACACCTTGGGCTTAGCTCGCAGGGCCTGGCAGTTCTaGTTGTTCAGGGCCTCGAAGAGATTCTCCAGCTTG +
Preference number: 6 (lower is better)
Translates to: YTLGLARRAWQF*LFRASKRFSSL
Trigger: CAAGCTGGAGAATCTCTTCGAGGCCCTGAACAACAAGAACTGCCAGGCCCTGCGAGCTAAGCCCAAGGTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS CAA 90 bp ATGTGTTCCAGAGCATCCAGGTCTTCTTCGGAACCTTCCCGGGCTTaGGTGACACACAGTATTAGGGCCAGGCGGGCACCTGACATATCA +
Preference number: 6 (lower is better)
Translates to: MCSRASRSSSEPSRA*VTHSIRARRAPDIS
Trigger: TGATATGTCAGGTGCCCGCCTGGCCCTAATACTGTGTGTCACCAAAGCCCGGGAAGGTTCCGAAGAAGACCTGGATGCTCTGGAACACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS CAA 90 bp ATGATGTACACCTTGGGCTTAGCTCGCAGGGCCTGGCAGTTCTTGTaGTTCAGGGCCTCGAAGAGATTCTCCAGCTTGACCATCTCCCCA +
Preference number: 6 (lower is better)
Translates to: MMYTLGLARRAWQFL*FRASKRFSSLTISP
Trigger: TGGGGAGATGGTCAAGCTGGAGAATCTCTTCGAGGCCCTGAACAACAAGAACTGCCAGGCCCTGCGAGCTAAGCCCAAGGTGTACATCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS CAA 90 bp ACAGCCGTTTCCGGAGGGTGCTTTGGATTTCAGGGTTCGTTTTCCTaGCTTTTCCTTCTTGAACCAGCTCTGCTTCTGCCATCCGCCGGG +
Preference number: 6 (lower is better)
Translates to: TAVSGGCFGFQGSFS*LFLLEPALLLPSAG
Trigger: CCCGGCGGATGGCAGAAGCAGAGCTGGTTCAAGAAGGAAAAGCAAGGAAAACGAACCCTGAAATCCAAAGCACCCTCCGGAAACGGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427043.4
ENST00000598738.1
CDS GCA 72 bp GCACAACTGACGGGATCTTCCCGGGAATCGATGGCCTaGTGGAATTTTTCCAGCTCTTCCTGGAATTGCTCG +
Preference number: 6 (lower is better)
Translates to: AQLTGSSRESMA*WNFSSSSWNCS
Trigger: CGAGCAATTCCAGGAAGAGCTGGAAAAATTCCAGCAGGCCATCGATTCCCGGGAAGATCCCGTCAGTTGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS CCA 72 bp CAACTGACGGGATCTTCCCGGGAATCGATGGCCTGCTaGAATTTTTCCAGCTCTTCCTGGAATTGCTCGGCA +
Preference number: 6 (lower is better)
Translates to: QLTGSSRESMAC*NFSSSSWNCSA
Trigger: TGCCGAGCAATTCCAGGAAGAGCTGGAAAAATTCCAGCAGGCCATCGATTCCCGGGAAGATCCCGTCAGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS CAA 72 bp TCCTCTTCCAAAGACCGCGGATTGCTCATTTCTCCTTaGGTTGTGAGTCCCGGCTCTCAGCACCCTTGTCTG +
Preference number: 6 (lower is better)
Translates to: SSSKDRGLLISP*VVSPGSQHPCL
Trigger: CAGACAAGGGTGCTGAGAGCCGGGACTCACAACCAAAGGAGAAATGAGCAATCCGCGGTCTTTGGAAGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS CAA 72 bp CTTTGTTCTCCTCGACAGGCCTGTATGATGTACACCTaGGGCTTAGCTCGCAGGGCCTGGCAGTTCTTGTTG +
Preference number: 6 (lower is better)
Translates to: LCSPRQACMMYT*GLARRAWQFLL
Trigger: CAACAAGAACTGCCAGGCCCTGCGAGCTAAGCCCAAGGTGTACATCATACAGGCCTGTCGAGGAGAACAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS CAA 90 bp TGTATGATGTACACCTTGGGCTTAGCTCGCAGGGCCTGGCAGTTCTaGTTGTTCAGGGCCTCGAAGAGATTCTCCAGCTTGACCATCTCC +
Preference number: 6 (lower is better)
Translates to: CMMYTLGLARRAWQF*LFRASKRFSSLTIS
Trigger: GGAGATGGTCAAGCTGGAGAATCTCTTCGAGGCCCTGAACAACAAGAACTGCCAGGCCCTGCGAGCTAAGCCCAAGGTGTACATCATACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS CAA 90 bp GAGGGTGCTTTGGATTTCAGGGTTCGTTTTCCTTGCTTTTCCTTCTaGAACCAGCTCTGCTTCTGCCATCCGCCGGGTCACCTCTGTCAG +
Preference number: 6 (lower is better)
Translates to: EGALDFRVRFPCFSF*NQLCFCHPPGHLCQ
Trigger: CTGACAGAGGTGACCCGGCGGATGGCAGAAGCAGAGCTGGTTCAAGAAGGAAAAGCAAGGAAAACGAACCCTGAAATCCAAAGCACCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427043.4
ENST00000598738.1
CDS CCA 72 bp TGTATGATGTACACCTTGGGCTTAGCTCGCAGGGCCTaGCAGTTCTTGTTGTTCAGGGCCTCGAAGAGATTC +
Preference number: 6 (lower is better)
Translates to: CMMYTLGLARRA*QFLLFRASKRF
Trigger: GAATCTCTTCGAGGCCCTGAACAACAAGAACTGCCAGGCCCTGCGAGCTAAGCCCAAGGTGTACATCATACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS GCA 72 bp CCTGGAATTGCTCGGCAGTGGGGTCTCTTTTCATGGTaGTTTCGAATCTCAGCTGCCGAAACATGTGTTCCA +
Preference number: 6 (lower is better)
Translates to: PGIARQWGLFSW*FRISAAETCVP
Trigger: TGGAACACATGTTTCGGCAGCTGAGATTCGAAAGCACCATGAAAAGAGACCCCACTGCCGAGCAATTCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS GCA 72 bp TTTCCTTGCTTTTCCTTCTTGAACCAGCTCTGCTTCTaGCATCCGCCGGGTCACCTCTGTCAGAAGTTCCAA +
Preference number: 6 (lower is better)
Translates to: FPCFSFLNQLCF*HPPGHLCQKFQ
Trigger: TTGGAACTTCTGACAGAGGTGACCCGGCGGATGGCAGAAGCAGAGCTGGTTCAAGAAGGAAAAGCAAGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427043.4
ENST00000598738.1
CDS CAA 90 bp TCATATTTCTCCTCTTCCAAAGACCGCGGATTGCTCATTTCTCCTTaGGTTGTGAGTCCCGGCTCTCAGCACCCTTGTCTGATCCAACTC +
Preference number: 6 (lower is better)
Translates to: SYFSSSKDRGLLISP*VVSPGSQHPCLIQL
Trigger: GAGTTGGATCAGACAAGGGTGCTGAGAGCCGGGACTCACAACCAAAGGAGAAATGAGCAATCCGCGGTCTTTGGAAGAGGAGAAATATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS CAA 90 bp ACGTGCAAGGCATCTGTGTATGTTGGGATGGTTTGTGGGCTGTCTTaGATGACCATCACAATCTCATCTCCACCTACTGTTTCACCGGGG +
Preference number: 6 (lower is better)
Translates to: TCKASVYVGMVCGLS*MTITISSPPTVSPG
Trigger: CCCCGGTGAAACAGTAGGTGGAGATGAGATTGTGATGGTCATCAAAGACAGCCCACAAACCATCCCAACATACACAGATGCCTTGCACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427043.4
ENST00000598738.1
CDS CCA 72 bp CTTCCTGGAATTGCTCGGCAGTGGGGTCTCTTTTCATaGTGCTTTCGAATCTCAGCTGCCGAAACATGTGTT +
Preference number: 6 (lower is better)
Translates to: LPGIARQWGLFS*CFRISAAETCV
Trigger: AACACATGTTTCGGCAGCTGAGATTCGAAAGCACCATGAAAAGAGACCCCACTGCCGAGCAATTCCAGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS CAA 72 bp TCCGGAGGGTGCTTTGGATTTCAGGGTTCGTTTTCCTaGCTTTTCCTTCTTGAACCAGCTCTGCTTCTGCCA +
Preference number: 6 (lower is better)
Translates to: SGGCFGFQGSFS*LFLLEPALLLP
Trigger: TGGCAGAAGCAGAGCTGGTTCAAGAAGGAAAAGCAAGGAAAACGAACCCTGAAATCCAAAGCACCCTCCGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427043.4
ENST00000598738.1
CDS CAA 72 bp CTTCTACTGCAGATACAGCCGTTTCCGGAGGGTGCTTaGGATTTCAGGGTTCGTTTTCCTTGCTTTTCCTTC +
Preference number: 6 (lower is better)
Translates to: LLLQIQPFPEGA*DFRVRFPCFSF
Trigger: GAAGGAAAAGCAAGGAAAACGAACCCTGAAATCCAAAGCACCCTCCGGAAACGGCTGTATCTGCAGTAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427043.4
ENST00000598738.1
CDS CAA 90 bp TACCGTGGAATAAACGTGCAAGGCATCTGTGTATGTTGGGATGGTTaGTGGGCTGTCTTTGATGACCATCACAATCTCATCTCCACCTAC +
Preference number: 6 (lower is better)
Translates to: YRGINVQGICVCWDG*WAVFDDHHNLISTY
Trigger: GTAGGTGGAGATGAGATTGTGATGGTCATCAAAGACAGCCCACAAACCATCCCAACATACACAGATGCCTTGCACGTTTATTCCACGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427043.4
ENST00000598738.1
CDS CAA 90 bp GTCTTTCTACTTCTACTGCAGATACAGCCGTTTCCGGAGGGTGCTTaGGATTTCAGGGTTCGTTTTCCTTGCTTTTCCTTCTTGAACCAG +
Preference number: 6 (lower is better)
Translates to: VFLLLLQIQPFPEGA*DFRVRFPCFSFLNQ
Trigger: CTGGTTCAAGAAGGAAAAGCAAGGAAAACGAACCCTGAAATCCAAAGCACCCTCCGGAAACGGCTGTATCTGCAGTAGAAGTAGAAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427043.4
ENST00000598738.1
CDS GCA 72 bp TCTACTTCTACTGCAGATACAGCCGTTTCCGGAGGGTaGTTTGGATTTCAGGGTTCGTTTTCCTTGCTTTTC +
Preference number: 6 (lower is better)
Translates to: STSTADTAVSGG*FGFQGSFSLLF
Trigger: GAAAAGCAAGGAAAACGAACCCTGAAATCCAAAGCACCCTCCGGAAACGGCTGTATCTGCAGTAGAAGTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427043.4
ENST00000598738.1
CDS CCA 72 bp TACCGTGGAATAAACGTGCAAGGCATCTGTGTATGTTaGGATGGTTTGTGGGCTGTCTTTGATGACCATCAC +
Preference number: 6 (lower is better)
Translates to: YRGINVQGICVC*DGLWAVFDDHH
Trigger: GTGATGGTCATCAAAGACAGCCCACAAACCATCCCAACATACACAGATGCCTTGCACGTTTATTCCACGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427043.4
ENST00000598738.1
CDS CCA 72 bp TTCTACTGCAGATACAGCCGTTTCCGGAGGGTGCTTTaGATTTCAGGGTTCGTTTTCCTTGCTTTTCCTTCT +
Preference number: 6 (lower is better)
Translates to: FYCRYSRFRRVL*ISGFVFLAFPS
Trigger: AGAAGGAAAAGCAAGGAAAACGAACCCTGAAATCCAAAGCACCCTCCGGAAACGGCTGTATCTGCAGTAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427043.4
ENST00000598738.1
CDS CAA 72 bp GACATATCATATTTCTCCTCTTCCAAAGACCGCGGATaGCTCATTTCTCCTTTGGTTGTGAGTCCCGGCTCT +
Preference number: 6 (lower is better)
Translates to: DISYFSSSKDRG*LISPLVVSPGS
Trigger: AGAGCCGGGACTCACAACCAAAGGAGAAATGAGCAATCCGCGGTCTTTGGAAGAGGAGAAATATGATATGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427043.4
CDS CAA 72 bp GCATCTGTGTATGTTGGGATGGTTTGTGGGCTGTCTTaGATGACCATCACAATCTCATCTCCACCTACTGTT +
Preference number: 6 (lower is better)
Translates to: ASVYVGMVCGLS*MTITISSPPTV
Trigger: AACAGTAGGTGGAGATGAGATTGTGATGGTCATCAAAGACAGCCCACAAACCATCCCAACATACACAGATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427043.4
ENST00000598738.1
CDS CAA 72 bp ATAAACGTGCAAGGCATCTGTGTATGTTGGGATGGTTaGTGGGCTGTCTTTGATGACCATCACAATCTCATC +
Preference number: 6 (lower is better)
Translates to: INVQGICVCWDG*WAVFDDHHNLI
Trigger: GATGAGATTGTGATGGTCATCAAAGACAGCCCACAAACCATCCCAACATACACAGATGCCTTGCACGTTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427043.4
ENST00000598738.1