RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CARF (Homo sapiens)

Ensembl gene IDs: ENSG00000138380

Ensembl transcript IDs: ENST00000320443.12, ENST00000402905.7, ENST00000414439.5, ENST00000414490.5, ENST00000414857.5, ENST00000422368.5, ENST00000427712.5, ENST00000428585.5, ENST00000430899.5, ENST00000431787.5, ENST00000432024.5, ENST00000434998.5, ENST00000438828.4, ENST00000441569.5, ENST00000443740.5, ENST00000444724.5, ENST00000445120.5, ENST00000447539.5, ENST00000457031.5, ENST00000471271.5

Found 574 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TTGCCCCTGAGGTATAATCACTTGTGCCATTCCTGTCTGGGTAGGTaGAATTACACGAAGTACCTGTCCATTTTCTGTTGGGCTGGCAAC +
Preference number: 1 (lower is better)
Translates to: LPLRYNHLCHSCLGR*NYTKYLSIFCWAGN
Trigger: GTTGCCAGCCCAACAGAAAATGGACAGGTACTTCGTGTAATTCCACCTACCCAGACAGGAATGGCACAAGTGATTATACCTCAGGGGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427712.5
3UTR TCA 90 bp TTTTGGTCCACTAGATGGAATTGCTCTGCAGAAAGAGTCTGTGTCTaGGTCAGGGGCCCTGGTATATTCTGTGATATGAGTGAATTATTT +
Preference number: 1 (lower is better)
Translates to: FWSTRWNCSAERVCV*VRGPGIFCDMSELF
Trigger: AAATAATTCACTCATATCACAGAATATACCAGGGCCCCTGACTCAGACACAGACTCTTTCTGCAGAGCAATTCCATCTAGTGGACCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427712.5
3UTR TCA 90 bp TCTCATCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTaGCTATATTCACCTTCCTTTCTAAGACATCAGAAGTCACCAGAG +
Preference number: 1 (lower is better)
Translates to: SHQTGLQSNYLNATL*LYSPSFLRHQKSPE
Trigger: CTCTGGTGACTTCTGATGTCTTAGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGATGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
3UTR GCA 90 bp ACTTTTTGGGCAATGGGAAGGATGTTTGAGGATGAAGAATGTAATTaGTGGTATTGTCTGCTAGAGTATCCACTCTTACAGTTGGTAAGT +
Preference number: 1 (lower is better)
Translates to: TFWAMGRMFEDEECN*WYCLLEYPLLQLVS
Trigger: ACTTACCAACTGTAAGAGTGGATACTCTAGCAGACAATACCAGCAATTACATTCTTCATCCTCAAACATCCTTCCCATTGCCCAAAAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427712.5
3UTR CCA 90 bp TTTTGGGCAATGGGAAGGATGTTTGAGGATGAAGAATGTAATTGCTaGTATTGTCTGCTAGAGTATCCACTCTTACAGTTGGTAAGTTTC +
Preference number: 1 (lower is better)
Translates to: FWAMGRMFEDEECNC*YCLLEYPLLQLVSF
Trigger: GAAACTTACCAACTGTAAGAGTGGATACTCTAGCAGACAATACCAGCAATTACATTCTTCATCCTCAAACATCCTTCCCATTGCCCAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427712.5
3UTR GCA 90 bp AGGGAAGAGGCTAAAATGCAACTGCACAGTTTCCACAGATGTAGCTaGTGGACTTTGTGTTATGATGTAAAATCTAATACTTCATCTTTC +
Preference number: 1 (lower is better)
Translates to: REEAKMQLHSFHRCS*WTLCYDVKSNTSSF
Trigger: GAAAGATGAAGTATTAGATTTTACATCATAACACAAAGTCCAGCAGCTACATCTGTGGAAACTGTGCAGTTGCATTTTAGCCTCTTCCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000438828.4
3UTR TCA 90 bp GTTAAACAACATCTTTCTCATACCCACATGATTAAGTATGTATTCTaGCAGGATATAAAGAAGATGAAACACAAGCTGGTGGGTCTCAGA +
Preference number: 1 (lower is better)
Translates to: VKQHLSHTHMIKYVF*QDIKKMKHKLVGLR
Trigger: TCTGAGACCCACCAGCTTGTGTTTCATCTTCTTTATATCCTGTCAGAATACATACTTAATCATGTGGGTATGAGAAAGATGTTGTTTAAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402905.7
ENST00000438828.4
3UTR GCA 90 bp AATAAAAGCTTCTCATCAAACTGGTCTTCAGTCCAATTATCTCAATaGCACGCTTTGACTATATTCACCTTCCTTTCTAAGACATCAGAA +
Preference number: 1 (lower is better)
Translates to: NKSFSSNWSSVQLSQ*HALTIFTFLSKTSE
Trigger: TTCTGATGTCTTAGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGATGAGAAGCTTTTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
3UTR-3UTR CCA 90 bp CTGGGTTTCTCTTCAGGGACATCCCGAGGACTATTCACATCCACAAGTTGCCCCTCCTGTCTGGGTAGGTaGAATTACACGAAGTACCTG +
Preference number: 2 (lower is better)
Translates to: LGFSSGTSRGLFTSTSCPSCLGR*NYTKYL
Trigger: CAGGTACTTCGTGTAATTCCACCTACCCAGACAGGA...GGGGCAACTTGTGGATGTGAATAGTCCTCGGGATGTCCCTGAAGAGAAACCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427712.5
3UTR-3UTR TCA 90 bp CTGTCCATTTTCTGTTGGGCTGGCAACGATCATCATTTGTGCATTGGATTCCCCGAAAGAGTCTGTGTCTaGGTCAGGGGCCCTGGTATA +
Preference number: 2 (lower is better)
Translates to: LSIFCWAGNDHHLCIGFPERVCV*VRGPGI
Trigger: TATACCAGGGCCCCTGACTCAGACACAGACTCTTTC...GGGGAATCCAATGCACAAATGATGATCGTTGCCAGCCCAACAGAAAATGGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000427712.5
3UTR-3UTR CCA 90 bp CTTCCAGCATTCCGGTCACTGACTTTTTGGGCAATGGGAAGGATGTTTGAGGATCTGTCCATTTTCTGTTaGGCTGGCAACGATCATCAT +
Preference number: 2 (lower is better)
Translates to: LPAFRSLTFWAMGRMFEDLSIFC*AGNDHH
Trigger: ATGATGATCGTTGCCAGCCCAACAGAAAATGGACAG...ATCCTCAAACATCCTTCCCATTGCCCAAAAAGTCAGTGACCGGAATGCTGGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427712.5
3UTR-3UTR CCA 90 bp AGGTATAATCACTTGTGCCATTCCTGTCTGGGTAGGTGGAATTACACGAAGTACATAGCCTGCCCATTTTaGTCCACTAGATGGAATTGC +
Preference number: 2 (lower is better)
Translates to: RYNHLCHSCLGRWNYTKYIACPF*STRWNC
Trigger: GCAATTCCATCTAGTGGACCAAAATGGGCAGGCTAT...GTACTTCGTGTAATTCCACCTACCCAGACAGGAATGGCACAAGTGATTATACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427712.5
3UTR CAA 90 bp GAATGTAATTGCTGGTATTGTCTGCTAGAGTATCCACTCTTACAGTaGGTAAGTTTCTGTTACTGGGTTTCTCTTCAGGGACATCCCGAG +
Preference number: 2 (lower is better)
Translates to: ECNCWYCLLEYPLLQ*VSFCYWVSLQGHPE
Trigger: CTCGGGATGTCCCTGAAGAGAAACCCAGTAACAGAAACTTACCAACTGTAAGAGTGGATACTCTAGCAGACAATACCAGCAATTACATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427712.5
3UTR-3UTR GCA 90 bp GTATCCACTCTTACAGTTGGTAAGTTTCTGTTACTGGGTTTCTCTTCAGGGACATCCACTAGATGGAATTaGTCTGCAGAAAGAGTCTGT +
Preference number: 2 (lower is better)
Translates to: VSTLTVGKFLLLGFSSGTSTRWN*SAERVC
Trigger: ACAGACTCTTTCTGCAGAGCAATTCCATCTAGTGGA...TGTCCCTGAAGAGAAACCCAGTAACAGAAACTTACCAACTGTAAGAGTGGATAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427712.5
3UTR-3UTR GCA 90 bp TCTTGTAAAGATGAAATGGGCATAATTCACAACCAGCAATTCTACTTTAAGGCAGAGGTCTCCCTGTTTTaGCCAGGTGGGTCTCAAACT +
Preference number: 2 (lower is better)
Translates to: SCKDEMGIIHNQQFYFKAEVSLF*PGGSQT
Trigger: AGTTTGAGACCCACCTGGGCAAAACAGGGAGACCTC...TGCCTTAAAGTAGAATTGCTGGTTGTGAATTATGCCCATTTCATCTTTACAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444724.5
3UTR-3UTR CCA 90 bp AGGTATAATCACTTGTGCCATTCCTGTCTGGGTAGGTGGAATTACACGAAGTACTCATCATTTGTGCATTaGATTCCCCCAATGACTGAA +
Preference number: 2 (lower is better)
Translates to: RYNHLCHSCLGRWNYTKYSSFVH*IPPMTE
Trigger: TTCAGTCATTGGGGGAATCCAATGCACAAATGATGA...GTACTTCGTGTAATTCCACCTACCCAGACAGGAATGGCACAAGTGATTATACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427712.5
3UTR-3UTR CCA 90 bp TCTTGTAAAGATGAAATGGGCATAATTCACAACCAGCAATTCTACTTTAAGGCAAGCTTCCCAAATAGCTaGGACTACAGCCCCATGCCA +
Preference number: 2 (lower is better)
Translates to: SCKDEMGIIHNQQFYFKASFPNS*DYSPMP
Trigger: TGGCATGGGGCTGTAGTCCCAGCTATTTGGGAAGCT...TGCCTTAAAGTAGAATTGCTGGTTGTGAATTATGCCCATTTCATCTTTACAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444724.5
3UTR CAA 90 bp TTCTCATCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTaGACTATATTCACCTTCCTTTCTAAGACATCAGAAGTCACCAGA +
Preference number: 2 (lower is better)
Translates to: FSSNWSSVQLSQCHA*TIFTFLSKTSEVTR
Trigger: TCTGGTGACTTCTGATGTCTTAGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGATGAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
3UTR-3UTR TCA 90 bp GCTAGAGTATCCACTCTTACAGTTGGTAAGTTTCTGTTACTGGGTTTCTCTTCAATTGGATTCCCCCAATaGCTGAAGTTCATATTGAAT +
Preference number: 2 (lower is better)
Translates to: ARVSTLTVGKFLLLGFSSIGFPQ*LKFILN
Trigger: ATTCAATATGAACTTCAGTCATTGGGGGAATCCAAT...TGAAGAGAAACCCAGTAACAGAAACTTACCAACTGTAAGAGTGGATACTCTAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427712.5
3UTR-3UTR TCA 90 bp GTTCAGACTATATTACTGTGGATAAATTCAGAACAGCTTTTGAAATACTGGCCTCTCAATGCCACGCTTTaGCTATATTCACCTTCCTTT +
Preference number: 2 (lower is better)
Translates to: VQTILLWINSEQLLKYWPLNATL*LYSPSF
Trigger: AAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAG...AGGCCAGTATTTCAAAAGCTGTTCTGAATTTATCCACAGTAATATAGTCTGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
3UTR-3UTR CCA 90 bp TCTTGTAAAGATGAAATGGGCATAATTCACAACCAGCAATTCTACTTTAAGGCAAAACTCAGGCAGAAGTaGTTACATTTATCTCATCTT +
Preference number: 2 (lower is better)
Translates to: SCKDEMGIIHNQQFYFKAKLRQK*LHLSHL
Trigger: AAGATGAGATAAATGTAACCACTTCTGCCTGAGTTT...TGCCTTAAAGTAGAATTGCTGGTTGTGAATTATGCCCATTTCATCTTTACAAGA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444724.5
3UTR-3UTR CAA 90 bp TTTAATGTAAATCCGAGCTGGACAAGTGGCTTTGTAGAGCTGACAAGACCTGCTGGAAACCTTTTCTTCTaGGCCCATACTGACACTCCA +
Preference number: 3 (lower is better)
Translates to: FNVNPSWTSGFVELTRPAGNLFF*AHTDTP
Trigger: TGGAGTGTCAGTATGGGCCAAGAAGAAAAGGTTTCC...AGCAGGTCTTGTCAGCTCTACAAAGCCACTTGTCCAGCTCGGATTTACATTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457031.5
3UTR TCA 72 bp ACTAGATGGAATTGCTCTGCAGAAAGAGTCTGTGTCTaGGTCAGGGGCCCTGGTATATTCTGTGATATGAGT +
Preference number: 3 (lower is better)
Translates to: TRWNCSAERVCV*VRGPGIFCDMS
Trigger: ACTCATATCACAGAATATACCAGGGCCCCTGACTCAGACACAGACTCTTTCTGCAGAGCAATTCCATCTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427712.5
3UTR-3UTR CAA 90 bp CTAGAGTATCCACTCTTACAGTTGGTAAGTTTCTGTTACTGGGTTTCTCTTCAGCCTGTCCATTTTCTGTaGGGCTGGCAACGATCATCA +
Preference number: 3 (lower is better)
Translates to: LEYPLLQLVSFCYWVSLQPVHFL*GWQRSS
Trigger: TGATGATCGTTGCCAGCCCAACAGAAAATGGACAGG...CTGAAGAGAAACCCAGTAACAGAAACTTACCAACTGTAAGAGTGGATACTCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427712.5
3UTR CCA 72 bp AGGTGGAATTACACGAAGTACCTGTCCATTTTCTGTTaGGCTGGCAACGATCATCATTTGTGCATTGGATTC +
Preference number: 3 (lower is better)
Translates to: RWNYTKYLSIFC*AGNDHHLCIGF
Trigger: GAATCCAATGCACAAATGATGATCGTTGCCAGCCCAACAGAAAATGGACAGGTACTTCGTGTAATTCCACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427712.5
3UTR CCA 72 bp AGGTATAATCACTTGTGCCATTCCTGTCTGGGTAGGTaGAATTACACGAAGTACCTGTCCATTTTCTGTTGG +
Preference number: 3 (lower is better)
Translates to: RYNHLCHSCLGR*NYTKYLSIFCW
Trigger: CCAACAGAAAATGGACAGGTACTTCGTGTAATTCCACCTACCCAGACAGGAATGGCACAAGTGATTATACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427712.5
3UTR CCA 72 bp GAGTATCCACTCTTACAGTTGGTAAGTTTCTGTTACTaGGTTTCTCTTCAGGGACATCCCGAGGACTATTCA +
Preference number: 3 (lower is better)
Translates to: EYPLLQLVSFCY*VSLQGHPEDYS
Trigger: TGAATAGTCCTCGGGATGTCCCTGAAGAGAAACCCAGTAACAGAAACTTACCAACTGTAAGAGTGGATACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427712.5
3UTR TCA 72 bp GGCAACGATCATCATTTGTGCATTGGATTCCCCCAATaGCTGAAGTTCATATTGAATAGCCTGCCCATTTTG +
Preference number: 3 (lower is better)
Translates to: GNDHHLCIGFPQ*LKFILNSLPIL
Trigger: CAAAATGGGCAGGCTATTCAATATGAACTTCAGTCATTGGGGGAATCCAATGCACAAATGATGATCGTTGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427712.5
3UTR-3UTR CAA 90 bp TGTTTGATGTCTAAGCCAGCTGATGGAGAAGAACCAATGCAGTATCCCTTCTGGTCCATGCTACATATGTaGATTTCTGTTGCTTATCTG +
Preference number: 3 (lower is better)
Translates to: CLMSKPADGEEPMQYPFWSMLHM*ISVAYL
Trigger: CAGATAAGCAACAGAAATCAACATATGTAGCATGGA...CCAGAAGGGATACTGCATTGGTTCTTCTCCATCAGCTGGCTTAGACATCAAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438828.4
3UTR GCA 72 bp GCAATGGGAAGGATGTTTGAGGATGAAGAATGTAATTaGTGGTATTGTCTGCTAGAGTATCCACTCTTACAG +
Preference number: 3 (lower is better)
Translates to: AMGRMFEDEECN*WYCLLEYPLLQ
Trigger: CTGTAAGAGTGGATACTCTAGCAGACAATACCAGCAATTACATTCTTCATCCTCAAACATCCTTCCCATTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427712.5
3UTR-3UTR CAA 90 bp CCTGAAACCAAGTCAATTAAGAATGGGAGGCTGGACTTAGAAAAGCCAAAAGTGTCCATGCTACATATGTaGATTTCTGTTGCTTATCTG +
Preference number: 3 (lower is better)
Translates to: PETKSIKNGRLDLEKPKVSMLHM*ISVAYL
Trigger: CAGATAAGCAACAGAAATCAACATATGTAGCATGGA...CACTTTTGGCTTTTCTAAGTCCAGCCTCCCATTCTTAATTGACTTGGTTTCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000438828.4
3UTR TCA 72 bp ACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTaGCTATATTCACCTTCCTTTCTAAGACATCAGAAG +
Preference number: 3 (lower is better)
Translates to: TGLQSNYLNATL*LYSPSFLRHQK
Trigger: CTTCTGATGTCTTAGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
3UTR CCA 72 bp ATGGGAAGGATGTTTGAGGATGAAGAATGTAATTGCTaGTATTGTCTGCTAGAGTATCCACTCTTACAGTTG +
Preference number: 3 (lower is better)
Translates to: MGRMFEDEECNC*YCLLEYPLLQL
Trigger: CAACTGTAAGAGTGGATACTCTAGCAGACAATACCAGCAATTACATTCTTCATCCTCAAACATCCTTCCCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427712.5
3UTR GCA 72 bp TTCTCATCAAACTGGTCTTCAGTCCAATTATCTCAATaGCACGCTTTGACTATATTCACCTTCCTTTCTAAG +
Preference number: 3 (lower is better)
Translates to: FSSNWSSVQLSQ*HALTIFTFLSK
Trigger: CTTAGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGATGAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
3UTR GCA 72 bp GCTAAAATGCAACTGCACAGTTTCCACAGATGTAGCTaGTGGACTTTGTGTTATGATGTAAAATCTAATACT +
Preference number: 3 (lower is better)
Translates to: AKMQLHSFHRCS*WTLCYDVKSNT
Trigger: AGTATTAGATTTTACATCATAACACAAAGTCCAGCAGCTACATCTGTGGAAACTGTGCAGTTGCATTTTAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000438828.4
3UTR TCA 72 bp CATCTTTCTCATACCCACATGATTAAGTATGTATTCTaGCAGGATATAAAGAAGATGAAACACAAGCTGGTG +
Preference number: 3 (lower is better)
Translates to: HLSHTHMIKYVF*QDIKKMKHKLV
Trigger: CACCAGCTTGTGTTTCATCTTCTTTATATCCTGTCAGAATACATACTTAATCATGTGGGTATGAGAAAGATG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402905.7
ENST00000438828.4
CDS-3UTR TCA 90 bp CCGAGCTGGACAAGTGGCTTTGTAGAGCTGACAAGACCTGCTTTCCTGCTCACTCAGCATTCCGGTCACTaGCTTTTTGGGCAATGGGAA +
Preference number: 4 (lower is better)
Translates to: PSWTSGFVELTRPAFLLTQHSGH*LFGQWE
Trigger: TTCCCATTGCCCAAAAAGTCAGTGACCGGAATGCTG...AGTGAGCAGGAAAGCAGGTCTTGTCAGCTCTACAAAGCCACTTGTCCAGCTCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457031.5
CDS-3UTR TCA 90 bp TGGGTTTCTCTTCAGGGACATCCCGAGGACTATTCACATCCACAAGTTGCCCCTGAAAGAGTCTGTGTCTaGGTCAGGGGCCCTGGTATA +
Preference number: 4 (lower is better)
Translates to: WVSLQGHPEDYSHPQVAPERVCV*VRGPGI
Trigger: TATACCAGGGCCCCTGACTCAGACACAGACTCTTTC...AGGGGCAACTTGTGGATGTGAATAGTCCTCGGGATGTCCCTGAAGAGAAACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427712.5
CDS-3UTR CCA 90 bp CCGAGCTGGACAAGTGGCTTTGTAGAGCTGACAAGACCTGCTTTCCTGCTCACTTCCTGTCTGGGTAGGTaGAATTACACGAAGTACCTG +
Preference number: 4 (lower is better)
Translates to: PSWTSGFVELTRPAFLLTSCLGR*NYTKYL
Trigger: CAGGTACTTCGTGTAATTCCACCTACCCAGACAGGA...AGTGAGCAGGAAAGCAGGTCTTGTCAGCTCTACAAAGCCACTTGTCCAGCTCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457031.5
CDS-3UTR TCA 90 bp GCTCTGCAGAAAGAGTCTGTGTCTGAGTCAGGGGCCCTGGTATATTCTGTGATATCCACAAGTTGCCCCTaGGGTATAATCACTTGTGCC +
Preference number: 4 (lower is better)
Translates to: ALQKESVSESGALVYSVISTSCP*GIITCA
Trigger: GGCACAAGTGATTATACCTCAGGGGCAACTTGTGGA...TATCACAGAATATACCAGGGCCCCTGACTCAGACACAGACTCTTTCTGCAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427712.5
CDS-3UTR TCA 90 bp AAATCCGAGCTGGACAAGTGGCTTTGTAGAGCTGACAAGACCTGCTTTCCTGCTTCCACAAGTTGCCCCTaGGGTATAATCACTTGTGCC +
Preference number: 4 (lower is better)
Translates to: KSELDKWLCRADKTCFPASTSCP*GIITCA
Trigger: GGCACAAGTGATTATACCTCAGGGGCAACTTGTGGA...AGCAGGAAAGCAGGTCTTGTCAGCTCTACAAAGCCACTTGTCCAGCTCGGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457031.5
CDS-3UTR TCA 90 bp TCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCGCTGGGCTTGGAGACTaGCGGGTCCCCCAAACACTC +
Preference number: 4 (lower is better)
Translates to: SNWSSVQLSQCHALTIFTAGLGD*RVPQTL
Trigger: GAGTGTTTGGGGGACCCGTCAGTCTCCAAGCCCAGC...GGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp TCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTAAGACATCAGAAGTCAGGCTTGGCTGGGCTTaGAGACTGACGGGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: SQCHALTIFTFLSKTSEVRLGWA*RLTGPP
Trigger: TGGGGGACCCGTCAGTCTCCAAGCCCAGCCAAGCCT...GACTTCTGATGTCTTAGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp AGATTCTTTGGGGCTCTAACTAGTCTAAGAGATTTGCTTGAAACTCTACTCCCTAGGCTTGGCTGGGCTTaGAGACTGACGGGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: RFFGALTSLRDLLETLLPRLGWA*RLTGPP
Trigger: TGGGGGACCCGTCAGTCTCCAAGCCCAGCCAAGCCT...AGGGAGTAGAGTTTCAAGCAAATCTCTTAGACTAGTTAGAGCCCCAAAGAATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434998.5
ENST00000444724.5
CDS-3UTR TCA 90 bp TCATCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCGCTGGGCTTGGAGACTaGCGGGTCCCCCAAACACTC +
Preference number: 4 (lower is better)
Translates to: SSNWSSVQLSQCHALTIFAGLGD*RVPQTL
Trigger: GAGTGTTTGGGGGACCCGTCAGTCTCCAAGCCCAGC...GAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp TCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTAGGCTTGGCTGGGCTTaGAGACTGACGGGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: SSVQLSQCHALTIFTFLSRLGWA*RLTGPP
Trigger: TGGGGGACCCGTCAGTCTCCAAGCCCAGCCAAGCCT...AGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp CCTGAAACCAAGTCAATTAAGAATGGGAGGCTGGACTTAGAAAAGCCAAAAGTGTGTAGCAGGCTTGGCTaGGCTTGGAGACTGACGGGT +
Preference number: 4 (lower is better)
Translates to: PETKSIKNGRLDLEKPKVCSRLG*AWRLTG
Trigger: ACCCGTCAGTCTCCAAGCCCAGCCAAGCCTGCTACA...CACTTTTGGCTTTTCTAAGTCCAGCCTCCCATTCTTAATTGACTTGGTTTCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000438828.4
CDS-3UTR CCA 90 bp AATCCGAGCTGGACAAGTGGCTTTGTAGAGCTGACAAGACCTGCTTTCCTGCTCATAGCCTGCCCATTTTaGTCCACTAGATGGAATTGC +
Preference number: 4 (lower is better)
Translates to: NPSWTSGFVELTRPAFLLIACPF*STRWNC
Trigger: GCAATTCCATCTAGTGGACCAAAATGGGCAGGCTAT...GAGCAGGAAAGCAGGTCTTGTCAGCTCTACAAAGCCACTTGTCCAGCTCGGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457031.5
CDS-3UTR CCA 90 bp CCGAGCTGGACAAGTGGCTTTGTAGAGCTGACAAGACCTGCTTTCCTGCTCACTCATTTTCTGTTGGGCTaGCAACGATCATCATTTGTG +
Preference number: 4 (lower is better)
Translates to: PSWTSGFVELTRPAFLLTHFLLG*QRSSFV
Trigger: CACAAATGATGATCGTTGCCAGCCCAACAGAAAATG...AGTGAGCAGGAAAGCAGGTCTTGTCAGCTCTACAAAGCCACTTGTCCAGCTCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457031.5
CDS-3UTR CCA 90 bp TCTCTTCAGGGACATCCCGAGGACTATTCACATCCACAAGTTGCCCCTGAGGTACTGTCCATTTTCTGTTaGGCTGGCAACGATCATCAT +
Preference number: 4 (lower is better)
Translates to: SLQGHPEDYSHPQVAPEVLSIFC*AGNDHH
Trigger: ATGATGATCGTTGCCAGCCCAACAGAAAATGGACAG...TACCTCAGGGGCAACTTGTGGATGTGAATAGTCCTCGGGATGTCCCTGAAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427712.5
CDS-3UTR TCA 90 bp CTATACCCAGGTTATGTGCGTAAACATCATGTTACATTGCTTCCAAAAGTATCAGCTGGGCTTGGAGACTaGCGGGTCCCCCAAACACTC +
Preference number: 4 (lower is better)
Translates to: LYPGYVRKHHVTLLPKVSAGLGD*RVPQTL
Trigger: GAGTGTTTGGGGGACCCGTCAGTCTCCAAGCCCAGC...TGATACTTTTGGAAGCAATGTAACATGATGTTTACGCACATAACCTGGGTATAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422368.5
CDS-3UTR TCA 90 bp CAACTAACCCAGTGTCTGAGAATACTGTATATAACATACCTAATGCTTGAGAACGCTGGGCTTGGAGACTaGCGGGTCCCCCAAACACTC +
Preference number: 4 (lower is better)
Translates to: QLTQCLRILYITYLMLENAGLGD*RVPQTL
Trigger: GAGTGTTTGGGGGACCCGTCAGTCTCCAAGCCCAGC...GTTCTCAAGCATTAGGTATGTTATATACAGTATTCTCAGACACTGGGTTAGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434998.5
ENST00000444724.5
CDS-3UTR TCA 90 bp CAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTAAGACATCAGCTGGGCTTGGAGACTaGCGGGTCCCCCAAACACTC +
Preference number: 4 (lower is better)
Translates to: QLSQCHALTIFTFLSKTSAGLGD*RVPQTL
Trigger: GAGTGTTTGGGGGACCCGTCAGTCTCCAAGCCCAGC...TGATGTCTTAGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR TCA 90 bp TGTTTGATGTCTAAGCCAGCTGATGGAGAAGAACCAATGCAGTATCCCTTCTGGCTTCTTGGCCCATACTaGCACTCCATTACCACAGCT +
Preference number: 4 (lower is better)
Translates to: CLMSKPADGEEPMQYPFWLLGPY*HSITTA
Trigger: AGCTGTGGTAATGGAGTGTCAGTATGGGCCAAGAAG...CCAGAAGGGATACTGCATTGGTTCTTCTCCATCAGCTGGCTTAGACATCAAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438828.4
CDS-3UTR TCA 90 bp CTGGGTTTCTCTTCAGGGACATCCCGAGGACTATTCACATCCACAAGTTGCCCCAATCCCTCAAATACTTaGGCACTGGTTTTTGACTCT +
Preference number: 4 (lower is better)
Translates to: LGFSSGTSRGLFTSTSCPNPSNT*ALVFDS
Trigger: AGAGTCAAAAACCAGTGCTCAAGTATTTGAGGGATT...GGGGCAACTTGTGGATGTGAATAGTCCTCGGGATGTCCCTGAAGAGAAACCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427712.5
CDS-3UTR CCA 90 bp CAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTAAGACATCAAGGCTTGGCTGGGCTTaGAGACTGACGGGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: QLSQCHALTIFTFLSKTSRLGWA*RLTGPP
Trigger: TGGGGGACCCGTCAGTCTCCAAGCCCAGCCAAGCCT...TGATGTCTTAGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp TGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTGTAGCAGGCTTGGCTaGGCTTGGAGACTGACGGGT +
Preference number: 4 (lower is better)
Translates to: WSSVQLSQCHALTIFTFLCSRLG*AWRLTG
Trigger: ACCCGTCAGTCTCCAAGCCCAGCCAAGCCTGCTACA...AAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp AGATTCTTTGGGGCTCTAACTAGTCTAAGAGATTTGCTTGAAACTCTACTCCCTTGTAGCAGGCTTGGCTaGGCTTGGAGACTGACGGGT +
Preference number: 4 (lower is better)
Translates to: RFFGALTSLRDLLETLLPCSRLG*AWRLTG
Trigger: ACCCGTCAGTCTCCAAGCCCAGCCAAGCCTGCTACA...AGGGAGTAGAGTTTCAAGCAAATCTCTTAGACTAGTTAGAGCCCCAAAGAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434998.5
ENST00000444724.5
CDS-3UTR CCA 90 bp AATCCGAGCTGGACAAGTGGCTTTGTAGAGCTGACAAGACCTGCTTTCCTGCTCAATGTAAATCCGAGCTaGACAAGTGGCTTTGTAGAG +
Preference number: 4 (lower is better)
Translates to: NPSWTSGFVELTRPAFLLNVNPS*TSGFVE
Trigger: CTCTACAAAGCCACTTGTCCAGCTCGGATTTACATT...GAGCAGGAAAGCAGGTCTTGTCAGCTCTACAAAGCCACTTGTCCAGCTCGGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457031.5
CDS-3UTR CCA 90 bp AAATCCGAGCTGGACAAGTGGCTTTGTAGAGCTGACAAGACCTGCTTTCCTGCTCTGTCCATTTTCTGTTaGGCTGGCAACGATCATCAT +
Preference number: 4 (lower is better)
Translates to: KSELDKWLCRADKTCFPALSIFC*AGNDHH
Trigger: ATGATGATCGTTGCCAGCCCAACAGAAAATGGACAG...AGCAGGAAAGCAGGTCTTGTCAGCTCTACAAAGCCACTTGTCCAGCTCGGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457031.5
CDS-3UTR TCA 90 bp AAGAGAGCTTGGGCCTATACCCAGGTTATGTGCGTAAACATCATGTTACATTGCTCCACAAGTTGCCCCTaGGGTATAATCACTTGTGCC +
Preference number: 4 (lower is better)
Translates to: KRAWAYTQVMCVNIMLHCSTSCP*GIITCA
Trigger: GGCACAAGTGATTATACCTCAGGGGCAACTTGTGGA...GCAATGTAACATGATGTTTACGCACATAACCTGGGTATAGGCCCAAGCTCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422368.5
CDS-3UTR TCA 90 bp TCTTGTAAAGATGAAATGGGCATAATTCACAACCAGCAATTCTACTTTAAGGCAGCTGGGCTTGGAGACTaGCGGGTCCCCCAAACACTC +
Preference number: 4 (lower is better)
Translates to: SCKDEMGIIHNQQFYFKAAGLGD*RVPQTL
Trigger: GAGTGTTTGGGGGACCCGTCAGTCTCCAAGCCCAGC...TGCCTTAAAGTAGAATTGCTGGTTGTGAATTATGCCCATTTCATCTTTACAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444724.5
CDS-3UTR TCA 90 bp CTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTGTATCCAGAAGTCCTaGAGGACTAGAGGACGGCTG +
Preference number: 4 (lower is better)
Translates to: LVFSPIISMPRFDYIHLPCIQKS*RTRGRL
Trigger: CAGCCGTCCTCTAGTCCTTCAGGACTTCTGGATACA...AGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR TCA 90 bp CCTGAAACCAAGTCAATTAAGAATGGGAGGCTGGACTTAGAAAAGCCAAAAGTGGAAAGAGTCTGTGTCTaGGTCAGGGGCCCTGGTATA +
Preference number: 4 (lower is better)
Translates to: PETKSIKNGRLDLEKPKVERVCV*VRGPGI
Trigger: TATACCAGGGCCCCTGACTCAGACACAGACTCTTTC...CACTTTTGGCTTTTCTAAGTCCAGCCTCCCATTCTTAATTGACTTGGTTTCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402905.7
ENST00000438828.4
CDS-3UTR TCA 90 bp CTGTACCTTTTTAATGTAAATCCGAGCTGGACAAGTGGCTTTGTAGAGCTGACAGAAAGAGTCTGTGTCTaGGTCAGGGGCCCTGGTATA +
Preference number: 4 (lower is better)
Translates to: LYLFNVNPSWTSGFVELTERVCV*VRGPGI
Trigger: TATACCAGGGCCCCTGACTCAGACACAGACTCTTTC...TGTCAGCTCTACAAAGCCACTTGTCCAGCTCGGATTTACATTAAAAAGGTACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457031.5
CDS-3UTR GCA 90 bp ATTACACGAAGTACCTGTCCATTTTCTGTTGGGCTGGCAACGATCATCATTTGTCAGCAGCATTTTCTCTaGACACATACCGGTCTGCCC +
Preference number: 4 (lower is better)
Translates to: ITRSTCPFSVGLATIIICQQHFL*THTGLP
Trigger: GGGCAGACCGGTATGTGTGCAGAGAAAATGCTGCTG...ACAAATGATGATCGTTGCCAGCCCAACAGAAAATGGACAGGTACTTCGTGTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427712.5
CDS-3UTR CCA 90 bp CTGGGTTTCTCTTCAGGGACATCCCGAGGACTATTCACATCCACAAGTTGCCCCTGTGAAAGCTTTAATTaGGTCTTCACAGCAGCATTT +
Preference number: 4 (lower is better)
Translates to: LGFSSGTSRGLFTSTSCPCESFN*VFTAAF
Trigger: AAATGCTGCTGTGAAGACCCAATTAAAGCTTTCACA...GGGGCAACTTGTGGATGTGAATAGTCCTCGGGATGTCCCTGAAGAGAAACCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427712.5
CDS-3UTR CCA 90 bp CTGAGGTATAATCACTTGTGCCATTCCTGTCTGGGTAGGTGGAATTACACGAAGTGTGCCATTCCTGTCTaGGTAGGTGGAATTACACGA +
Preference number: 4 (lower is better)
Translates to: LRYNHLCHSCLGRWNYTKCAIPV*VGGITR
Trigger: TCGTGTAATTCCACCTACCCAGACAGGAATGGCACA...CTTCGTGTAATTCCACCTACCCAGACAGGAATGGCACAAGTGATTATACCTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427712.5
CDS-3UTR CCA 90 bp TGGGTTTCTCTTCAGGGACATCCCGAGGACTATTCACATCCACAAGTTGCCCCTGTAAGTTTCTGTTACTaGGTTTCTCTTCAGGGACAT +
Preference number: 4 (lower is better)
Translates to: WVSLQGHPEDYSHPQVAPVSFCY*VSLQGH
Trigger: ATGTCCCTGAAGAGAAACCCAGTAACAGAAACTTAC...AGGGGCAACTTGTGGATGTGAATAGTCCTCGGGATGTCCCTGAAGAGAAACCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427712.5
CDS-3UTR CCA 90 bp TATACCCAGGTTATGTGCGTAAACATCATGTTACATTGCTTCCAAAAGTATCAAAGGCTTGGCTGGGCTTaGAGACTGACGGGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: YTQVMCVNIMLHCFQKYQRLGWA*RLTGPP
Trigger: TGGGGGACCCGTCAGTCTCCAAGCCCAGCCAAGCCT...TTGATACTTTTGGAAGCAATGTAACATGATGTTTACGCACATAACCTGGGTATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422368.5
CDS-3UTR CCA 90 bp AAACTCTACTCCCTTAGTAAACAACTAACCCAGTGTCTGAGAATACTGTATATAAGGCTTGGCTGGGCTTaGAGACTGACGGGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: KLYSLSKQLTQCLRILYIRLGWA*RLTGPP
Trigger: TGGGGGACCCGTCAGTCTCCAAGCCCAGCCAAGCCT...TATATACAGTATTCTCAGACACTGGGTTAGTTGTTTACTAAGGGAGTAGAGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434998.5
ENST00000444724.5
CDS-3UTR CCA 90 bp AAGAGAGCTTGGGCCTATACCCAGGTTATGTGCGTAAACATCATGTTACATTGCTCCGAGCTGGACAAGTaGCTTTGTAGAGCTGACAAG +
Preference number: 4 (lower is better)
Translates to: KRAWAYTQVMCVNIMLHCSELDK*LCRADK
Trigger: CTTGTCAGCTCTACAAAGCCACTTGTCCAGCTCGGA...GCAATGTAACATGATGTTTACGCACATAACCTGGGTATAGGCCCAAGCTCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422368.5
CDS-3UTR CCA 90 bp AATCCGAGCTGGACAAGTGGCTTTGTAGAGCTGACAAGACCTGCTTTCCTGCTCCAAAGGAAGAATCCCTaGAGTCCATACAGATTAGAT +
Preference number: 4 (lower is better)
Translates to: NPSWTSGFVELTRPAFLLQRKNP*SPYRLD
Trigger: ATCTAATCTGTATGGACTCCAGGGATTCTTCCTTTG...GAGCAGGAAAGCAGGTCTTGTCAGCTCTACAAAGCCACTTGTCCAGCTCGGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457031.5
CDS-3UTR CCA 90 bp AATCCGAGCTGGACAAGTGGCTTTGTAGAGCTGACAAGACCTGCTTTCCTGCTCTTTTGGTCCACTAGATaGAATTGCTCTGCAGAAAGA +
Preference number: 4 (lower is better)
Translates to: NPSWTSGFVELTRPAFLLFWSTR*NCSAER
Trigger: TCTTTCTGCAGAGCAATTCCATCTAGTGGACCAAAA...GAGCAGGAAAGCAGGTCTTGTCAGCTCTACAAAGCCACTTGTCCAGCTCGGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457031.5
CDS-3UTR TCA 90 bp CTGTACCTTTTTAATGTAAATCCGAGCTGGACAAGTGGCTTTGTAGAGCTGACACTTCTTGGCCCATACTaGCACTCCATTACCACAGCT +
Preference number: 4 (lower is better)
Translates to: LYLFNVNPSWTSGFVELTLLGPY*HSITTA
Trigger: AGCTGTGGTAATGGAGTGTCAGTATGGGCCAAGAAG...TGTCAGCTCTACAAAGCCACTTGTCCAGCTCGGATTTACATTAAAAAGGTACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457031.5
CDS-3UTR TCA 90 bp GTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTGTATCCAGAAGTCCTaGAGGACTAGAGGACGGCTG +
Preference number: 4 (lower is better)
Translates to: VFSPIISMPRFDYIHLPFCIQKS*RTRGRL
Trigger: CAGCCGTCCTCTAGTCCTTCAGGACTTCTGGATACA...GAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR TCA 90 bp GTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCCTGGTCTCGAACTCCTaGCCTCAGGTTATCTACCCA +
Preference number: 4 (lower is better)
Translates to: VFSPIISMPRFDYIHLPFLVSNS*PQVIYP
Trigger: TGGGTAGATAACCTGAGGTCAGGAGTTCGAGACCAG...GAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000438828.4
CDS-3UTR TCA 90 bp TTGGGCCTATACCCAGGTTATGTGCGTAAACATCATGTTACATTGCTTCCAAAAGAAAGAGTCTGTGTCTaGGTCAGGGGCCCTGGTATA +
Preference number: 4 (lower is better)
Translates to: LGLYPGYVRKHHVTLLPKERVCV*VRGPGI
Trigger: TATACCAGGGCCCCTGACTCAGACACAGACTCTTTC...TTTTGGAAGCAATGTAACATGATGTTTACGCACATAACCTGGGTATAGGCCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422368.5
CDS-3UTR TCA 90 bp CAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTAAGACATCAAGATCAGTGGTCTGGTaGTGGTGGGGTGGCAAGGAG +
Preference number: 4 (lower is better)
Translates to: QLSQCHALTIFTFLSKTSRSVVW*WWGGKE
Trigger: CTCCTTGCCACCCCACCATCACCAGACCACTGATCT...TGATGTCTTAGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438828.4
CDS-3UTR GCA 90 bp TCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCCAGCAGCATTTTCTCTaGACACATACCGGTCTGCCC +
Preference number: 4 (lower is better)
Translates to: SNWSSVQLSQCHALTIFTQQHFL*THTGLP
Trigger: GGGCAGACCGGTATGTGTGCAGAGAAAATGCTGCTG...GGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320443.12
CDS-3UTR GCA 90 bp CTGTCCATTTTCTGTTGGGCTGGCAACGATCATCATTTGTGCATTGGATTCCCCTCCACTAGATGGAATTaGTCTGCAGAAAGAGTCTGT +
Preference number: 4 (lower is better)
Translates to: LSIFCWAGNDHHLCIGFPSTRWN*SAERVC
Trigger: ACAGACTCTTTCTGCAGAGCAATTCCATCTAGTGGA...GGGGAATCCAATGCACAAATGATGATCGTTGCCAGCCCAACAGAAAATGGACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427712.5
CDS-3UTR GCA 90 bp AGATTCTTTGGGGCTCTAACTAGTCTAAGAGATTTGCTTGAAACTCTACTCCCTGAGGTCTCCCTGTTTTaGCCAGGTGGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: RFFGALTSLRDLLETLLPEVSLF*PGGSQT
Trigger: AGTTTGAGACCCACCTGGGCAAAACAGGGAGACCTC...AGGGAGTAGAGTTTCAAGCAAATCTCTTAGACTAGTTAGAGCCCCAAAGAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434998.5
ENST00000444724.5
CDS-3UTR CCA 90 bp AAGAGAGCTTGGGCCTATACCCAGGTTATGTGCGTAAACATCATGTTACATTGCTGTGCCATTCCTGTCTaGGTAGGTGGAATTACACGA +
Preference number: 4 (lower is better)
Translates to: KRAWAYTQVMCVNIMLHCCAIPV*VGGITR
Trigger: TCGTGTAATTCCACCTACCCAGACAGGAATGGCACA...GCAATGTAACATGATGTTTACGCACATAACCTGGGTATAGGCCCAAGCTCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422368.5
CDS-3UTR CCA 90 bp TGTTTGATGTCTAAGCCAGCTGATGGAGAAGAACCAATGCAGTATCCCTTCTGGTGTATTAGAAGAAAGTaGCTGAAGAGGCCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: CLMSKPADGEEPMQYPFWCIRRK*LKRPQK
Trigger: CTTCTGGGGCCTCTTCAGCCACTTTCTTCTAATACA...CCAGAAGGGATACTGCATTGGTTCTTCTCCATCAGCTGGCTTAGACATCAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438828.4
CDS-3UTR CCA 90 bp CTATACCCAGGTTATGTGCGTAAACATCATGTTACATTGCTTCCAAAAGTATCATGTAGCAGGCTTGGCTaGGCTTGGAGACTGACGGGT +
Preference number: 4 (lower is better)
Translates to: LYPGYVRKHHVTLLPKVSCSRLG*AWRLTG
Trigger: ACCCGTCAGTCTCCAAGCCCAGCCAAGCCTGCTACA...TGATACTTTTGGAAGCAATGTAACATGATGTTTACGCACATAACCTGGGTATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422368.5
CDS-3UTR CCA 90 bp CCTGAAACCAAGTCAATTAAGAATGGGAGGCTGGACTTAGAAAAGCCAAAAGTGTCCGAGCTGGACAAGTaGCTTTGTAGAGCTGACAAG +
Preference number: 4 (lower is better)
Translates to: PETKSIKNGRLDLEKPKVSELDK*LCRADK
Trigger: CTTGTCAGCTCTACAAAGCCACTTGTCCAGCTCGGA...CACTTTTGGCTTTTCTAAGTCCAGCCTCCCATTCTTAATTGACTTGGTTTCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000438828.4
CDS-3UTR CCA 90 bp TGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTGGAGAGCAAGTGGGTTaGCTCAGGAGACAAAGAACC +
Preference number: 4 (lower is better)
Translates to: WSSVQLSQCHALTIFTFLGEQVG*LRRQRT
Trigger: GGTTCTTTGTCTCCTGAGCCAACCCACTTGCTCTCC...AAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp CTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTAGTGAGGAGAGCAAGTaGGTTGGCTCAGGAGACAAA +
Preference number: 4 (lower is better)
Translates to: LVFSPIISMPRFDYIHLPSEESK*VGSGDK
Trigger: TTTGTCTCCTGAGCCAACCCACTTGCTCTCCTCACT...AGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp TGTCTGGGTAGGTGGAATTACACGAAGTACCTGTCCATTTTCTGTTGGGCTGGCTTTTGGTCCACTAGATaGAATTGCTCTGCAGAAAGA +
Preference number: 4 (lower is better)
Translates to: CLGRWNYTKYLSIFCWAGFWSTR*NCSAER
Trigger: TCTTTCTGCAGAGCAATTCCATCTAGTGGACCAAAA...GCCAGCCCAACAGAAAATGGACAGGTACTTCGTGTAATTCCACCTACCCAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427712.5
CDS-3UTR CCA 90 bp CTTCCAGCATTCCGGTCACTGACTTTTTGGGCAATGGGAAGGATGTTTGAGGATCATTTTCTGTTGGGCTaGCAACGATCATCATTTGTG +
Preference number: 4 (lower is better)
Translates to: LPAFRSLTFWAMGRMFEDHFLLG*QRSSFV
Trigger: CACAAATGATGATCGTTGCCAGCCCAACAGAAAATG...ATCCTCAAACATCCTTCCCATTGCCCAAAAAGTCAGTGACCGGAATGCTGGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427712.5
CDS-3UTR CCA 90 bp CTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTGGGGGTGGGTGGGCGTaGAGAATTACTTATTACACA +
Preference number: 4 (lower is better)
Translates to: LVFSPIISMPRFDYIHLPGGGWA*RITYYT
Trigger: TGTGTAATAAGTAATTCTCCACGCCCACCCACCCCC...AGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438828.4
CDS-3UTR TCA 90 bp GTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTCCACAAGTTGCCCCTaGGGTATAATCACTTGTGCC +
Preference number: 4 (lower is better)
Translates to: VFSPIISMPRFDYIHLPFSTSCP*GIITCA
Trigger: GGCACAAGTGATTATACCTCAGGGGCAACTTGTGGA...GAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR TCA 90 bp TCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTCCACAAGTTGCCCCTaGGGTATAATCACTTGTGCC +
Preference number: 4 (lower is better)
Translates to: SNWSSVQLSQCHALTIFTSTSCP*GIITCA
Trigger: GGCACAAGTGATTATACCTCAGGGGCAACTTGTGGA...GGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR TCA 90 bp CTAGAGTATCCACTCTTACAGTTGGTAAGTTTCTGTTACTGGGTTTCTCTTCAGCAGCATTCCGGTCACTaGCTTTTTGGGCAATGGGAA +
Preference number: 4 (lower is better)
Translates to: LEYPLLQLVSFCYWVSLQQHSGH*LFGQWE
Trigger: TTCCCATTGCCCAAAAAGTCAGTGACCGGAATGCTG...CTGAAGAGAAACCCAGTAACAGAAACTTACCAACTGTAAGAGTGGATACTCTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427712.5
CDS-3UTR TCA 90 bp TCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCCAGCATTCCGGTCACTaGCTTTTTGGGCAATGGGAA +
Preference number: 4 (lower is better)
Translates to: SNWSSVQLSQCHALTIFTQHSGH*LFGQWE
Trigger: TTCCCATTGCCCAAAAAGTCAGTGACCGGAATGCTG...GGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR TCA 90 bp AGATTCTTTGGGGCTCTAACTAGTCTAAGAGATTTGCTTGAAACTCTACTCCCTCAGCATTCCGGTCACTaGCTTTTTGGGCAATGGGAA +
Preference number: 4 (lower is better)
Translates to: RFFGALTSLRDLLETLLPQHSGH*LFGQWE
Trigger: TTCCCATTGCCCAAAAAGTCAGTGACCGGAATGCTG...AGGGAGTAGAGTTTCAAGCAAATCTCTTAGACTAGTTAGAGCCCCAAAGAATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434998.5
ENST00000444724.5
CDS-3UTR TCA 90 bp TCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTAAGACATCAGAAGTCCAGCATTCCGGTCACTaGCTTTTTGGGCAATGGGAA +
Preference number: 4 (lower is better)
Translates to: SQCHALTIFTFLSKTSEVQHSGH*LFGQWE
Trigger: TTCCCATTGCCCAAAAAGTCAGTGACCGGAATGCTG...GACTTCTGATGTCTTAGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR TCA 90 bp GTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCCTTCTTGGCCCATACTaGCACTCCATTACCACAGCT +
Preference number: 4 (lower is better)
Translates to: VFSPIISMPRFDYIHLPFLLGPY*HSITTA
Trigger: AGCTGTGGTAATGGAGTGTCAGTATGGGCCAAGAAG...GAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR TCA 90 bp GTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTAAGACACTGGTCTCGAACTCCTaGCCTCAGGTTATCTACCCA +
Preference number: 4 (lower is better)
Translates to: VQLSQCHALTIFTFLSKTLVSNS*PQVIYP
Trigger: TGGGTAGATAACCTGAGGTCAGGAGTTCGAGACCAG...TGTCTTAGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000438828.4
CDS-3UTR TCA 90 bp TCATCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCCTGGTCTCGAACTCCTaGCCTCAGGTTATCTACCCA +
Preference number: 4 (lower is better)
Translates to: SSNWSSVQLSQCHALTIFLVSNS*PQVIYP
Trigger: TGGGTAGATAACCTGAGGTCAGGAGTTCGAGACCAG...GAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000438828.4
CDS-3UTR TCA 90 bp TTCTCATCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATAGAAAGAGTCTGTGTCTaGGTCAGGGGCCCTGGTATA +
Preference number: 4 (lower is better)
Translates to: FSSNWSSVQLSQCHALTIERVCV*VRGPGI
Trigger: TATACCAGGGCCCCTGACTCAGACACAGACTCTTTC...TATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGATGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402905.7
ENST00000438828.4
CDS-3UTR TCA 90 bp AGATTCTTTGGGGCTCTAACTAGTCTAAGAGATTTGCTTGAAACTCTACTCCCTCTCAGAGGTCCAGGATaGAACTGCAACTCTTTCAGC +
Preference number: 4 (lower is better)
Translates to: RFFGALTSLRDLLETLLPLRGPG*NCNSFS
Trigger: GCTGAAAGAGTTGCAGTTTCATCCTGGACCTCTGAG...AGGGAGTAGAGTTTCAAGCAAATCTCTTAGACTAGTTAGAGCCCCAAAGAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434998.5
ENST00000444724.5
CDS-3UTR CCA 90 bp CCTGAAACCAAGTCAATTAAGAATGGGAGGCTGGACTTAGAAAAGCCAAAAGTGCTGTCCATTTTCTGTTaGGCTGGCAACGATCATCTC +
Preference number: 4 (lower is better)
Translates to: PETKSIKNGRLDLEKPKVLSIFC*AGNDHL
Trigger: GAGATGATCGTTGCCAGCCCAACAGAAAATGGACAG...CACTTTTGGCTTTTCTAAGTCCAGCCTCCCATTCTTAATTGACTTGGTTTCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000320443.12
CDS-3UTR CCA 90 bp CCTGAAACCAAGTCAATTAAGAATGGGAGGCTGGACTTAGAAAAGCCAAAAGTGTCCTGTCTGGGTAGGTaGAATTACACGAAGTACCTG +
Preference number: 4 (lower is better)
Translates to: PETKSIKNGRLDLEKPKVSCLGR*NYTKYL
Trigger: CAGGTACTTCGTGTAATTCCACCTACCCAGACAGGA...CACTTTTGGCTTTTCTAAGTCCAGCCTCCCATTCTTAATTGACTTGGTTTCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000438828.4
CDS-3UTR CCA 90 bp GTATCCACTCTTACAGTTGGTAAGTTTCTGTTACTGGGTTTCTCTTCAGGGACATCCTGTCTGGGTAGGTaGAATTACACGAAGTACCTG +
Preference number: 4 (lower is better)
Translates to: VSTLTVGKFLLLGFSSGTSCLGR*NYTKYL
Trigger: CAGGTACTTCGTGTAATTCCACCTACCCAGACAGGA...TGTCCCTGAAGAGAAACCCAGTAACAGAAACTTACCAACTGTAAGAGTGGATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427712.5
CDS-3UTR CCA 90 bp CTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTCCTGTCTGGGTAGGTaGAATTACACGAAGTACCTG +
Preference number: 4 (lower is better)
Translates to: LVFSPIISMPRFDYIHLPSCLGR*NYTKYL
Trigger: CAGGTACTTCGTGTAATTCCACCTACCCAGACAGGA...AGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp CTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTGTGCCATTCCTGTCTaGGTAGGTGGAATTACACGA +
Preference number: 4 (lower is better)
Translates to: LVFSPIISMPRFDYIHLPCAIPV*VGGITR
Trigger: TCGTGTAATTCCACCTACCCAGACAGGAATGGCACA...AGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp CTGTACCTTTTTAATGTAAATCCGAGCTGGACAAGTGGCTTTGTAGAGCTGACATGTGCCATTCCTGTCTaGGTAGGTGGAATTACACGA +
Preference number: 4 (lower is better)
Translates to: LYLFNVNPSWTSGFVELTCAIPV*VGGITR
Trigger: TCGTGTAATTCCACCTACCCAGACAGGAATGGCACA...TGTCAGCTCTACAAAGCCACTTGTCCAGCTCGGATTTACATTAAAAAGGTACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457031.5
CDS-3UTR CCA 90 bp ACGAAGTACCTGTCCATTTTCTGTTGGGCTGGCAACGATCATCATTTGTGCATTCGGTCACTGACTTTTTaGGCAATGGGAAGGATGTTT +
Preference number: 4 (lower is better)
Translates to: TKYLSIFCWAGNDHHLCIRSLTF*AMGRMF
Trigger: AAACATCCTTCCCATTGCCCAAAAAGTCAGTGACCG...AATGCACAAATGATGATCGTTGCCAGCCCAACAGAAAATGGACAGGTACTTCGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427712.5
CDS-3UTR CCA 90 bp TTTAATGTAAATCCGAGCTGGACAAGTGGCTTTGTAGAGCTGACAAGACCTGCTCGGTCACTGACTTTTTaGGCAATGGGAAGGATGTTT +
Preference number: 4 (lower is better)
Translates to: FNVNPSWTSGFVELTRPARSLTF*AMGRMF
Trigger: AAACATCCTTCCCATTGCCCAAAAAGTCAGTGACCG...AGCAGGTCTTGTCAGCTCTACAAAGCCACTTGTCCAGCTCGGATTTACATTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457031.5
CDS-3UTR CCA 90 bp AAACTCTACTCCCTTAGTAAACAACTAACCCAGTGTCTGAGAATACTGTATATATGTAGCAGGCTTGGCTaGGCTTGGAGACTGACGGGT +
Preference number: 4 (lower is better)
Translates to: KLYSLSKQLTQCLRILYICSRLG*AWRLTG
Trigger: ACCCGTCAGTCTCCAAGCCCAGCCAAGCCTGCTACA...TATATACAGTATTCTCAGACACTGGGTTAGTTGTTTACTAAGGGAGTAGAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434998.5
ENST00000444724.5
CDS-3UTR CCA 90 bp TCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTAAGACATCAGAAGTCTCCGAGCTGGACAAGTaGCTTTGTAGAGCTGACAAG +
Preference number: 4 (lower is better)
Translates to: SQCHALTIFTFLSKTSEVSELDK*LCRADK
Trigger: CTTGTCAGCTCTACAAAGCCACTTGTCCAGCTCGGA...GACTTCTGATGTCTTAGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp TTCTCATCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATAGGAGAGCAAGTGGGTTaGCTCAGGAGACAAAGAACC +
Preference number: 4 (lower is better)
Translates to: FSSNWSSVQLSQCHALTIGEQVG*LRRQRT
Trigger: GGTTCTTTGTCTCCTGAGCCAACCCACTTGCTCTCC...TATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGATGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp TCATCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCGGAGAGCAAGTGGGTTaGCTCAGGAGACAAAGAACC +
Preference number: 4 (lower is better)
Translates to: SSNWSSVQLSQCHALTIFGEQVG*LRRQRT
Trigger: GGTTCTTTGTCTCCTGAGCCAACCCACTTGCTCTCC...GAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp CTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTCTGGAAGGTTACCCATaGTGGAGGCAGTACTATTGT +
Preference number: 4 (lower is better)
Translates to: LVFSPIISMPRFDYIHLPLEGYP*WRQYYC
Trigger: ACAATAGTACTGCCTCCACCATGGGTAACCTTCCAG...AGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp AAGAGAGCTTGGGCCTATACCCAGGTTATGTGCGTAAACATCATGTTACATTGCATAGCCTGCCCATTTTaGTCCACTAGATGGAATTGC +
Preference number: 4 (lower is better)
Translates to: KRAWAYTQVMCVNIMLHCIACPF*STRWNC
Trigger: GCAATTCCATCTAGTGGACCAAAATGGGCAGGCTAT...GCAATGTAACATGATGTTTACGCACATAACCTGGGTATAGGCCCAAGCTCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422368.5
CDS-3UTR TCA 90 bp CTCATCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTTCCACAAGTTGCCCCTaGGGTATAATCACTTGTGCC +
Preference number: 4 (lower is better)
Translates to: LIKLVFSPIISMPRFDYISTSCP*GIITCA
Trigger: GGCACAAGTGATTATACCTCAGGGGCAACTTGTGGA...AATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGATGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR TCA 90 bp GTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTAAGACACAGCATTCCGGTCACTaGCTTTTTGGGCAATGGGAA +
Preference number: 4 (lower is better)
Translates to: VQLSQCHALTIFTFLSKTQHSGH*LFGQWE
Trigger: TTCCCATTGCCCAAAAAGTCAGTGACCGGAATGCTG...TGTCTTAGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR TCA 90 bp TTCTCATCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATACTTCTTGGCCCATACTaGCACTCCATTACCACAGCT +
Preference number: 4 (lower is better)
Translates to: FSSNWSSVQLSQCHALTILLGPY*HSITTA
Trigger: AGCTGTGGTAATGGAGTGTCAGTATGGGCCAAGAAG...TATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGATGAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR TCA 90 bp TCATCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCCTTCTTGGCCCATACTaGCACTCCATTACCACAGCT +
Preference number: 4 (lower is better)
Translates to: SSNWSSVQLSQCHALTIFLLGPY*HSITTA
Trigger: AGCTGTGGTAATGGAGTGTCAGTATGGGCCAAGAAG...GAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR TCA 90 bp TCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTAAGACATCAGAAGTCGTACCTCATCGGGTTTaGACAGTTCCCTTTCCACAA +
Preference number: 4 (lower is better)
Translates to: SQCHALTIFTFLSKTSEVVPHRV*TVPFPQ
Trigger: TTGTGGAAAGGGAACTGTTCAAACCCGATGAGGTAC...GACTTCTGATGTCTTAGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR TCA 90 bp CTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTCTGTCTGTAGTCCATTaGAGCGTTGCTGGAATAATC +
Preference number: 4 (lower is better)
Translates to: LVFSPIISMPRFDYIHLPLSVVH*SVAGII
Trigger: GATTATTCCAGCAACGCTTCAATGGACTACAGACAG...AGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR TCA 90 bp CAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTAAGACATCATGTATCCAGAAGTCCTaGAGGACTAGAGGACGGCTG +
Preference number: 4 (lower is better)
Translates to: QLSQCHALTIFTFLSKTSCIQKS*RTRGRL
Trigger: CAGCCGTCCTCTAGTCCTTCAGGACTTCTGGATACA...TGATGTCTTAGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR TCA 90 bp CAACTAACCCAGTGTCTGAGAATACTGTATATAACATACCTAATGCTTGAGAACGAAAGAGTCTGTGTCTaGGTCAGGGGCCCTGGTATA +
Preference number: 4 (lower is better)
Translates to: QLTQCLRILYITYLMLENERVCV*VRGPGI
Trigger: TATACCAGGGCCCCTGACTCAGACACAGACTCTTTC...GTTCTCAAGCATTAGGTATGTTATATACAGTATTCTCAGACACTGGGTTAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444724.5
CDS-3UTR TCA 90 bp GTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTAAGACAATCCCTCCTGGTACATaGTTCACACCCTGTACTCTG +
Preference number: 4 (lower is better)
Translates to: VQLSQCHALTIFTFLSKTIPPGT*FTPCTL
Trigger: CAGAGTACAGGGTGTGAATCATGTACCAGGAGGGAT...TGTCTTAGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438828.4
CDS-3UTR GCA 90 bp CTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTCACAGCTCTACTCCCTaGATTAACAAATGGGATTCC +
Preference number: 4 (lower is better)
Translates to: LVFSPIISMPRFDYIHLPHSSTP*INKWDS
Trigger: GGAATCCCATTTGTTAATGCAGGGAGTAGAGCTGTG...AGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp TGTGCCATTCCTGTCTGGGTAGGTGGAATTACACGAAGTACCTGTCCATTTTCTCAAATACTTGAGCACTaGTTTTTGACTCTTCACCGT +
Preference number: 4 (lower is better)
Translates to: CAIPVWVGGITRSTCPFSQILEH*FLTLHR
Trigger: ACGGTGAAGAGTCAAAAACCAGTGCTCAAGTATTTG...AGAAAATGGACAGGTACTTCGTGTAATTCCACCTACCCAGACAGGAATGGCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427712.5
CDS-3UTR CCA 90 bp AGATTCTTTGGGGCTCTAACTAGTCTAAGAGATTTGCTTGAAACTCTACTCCCTCTGTCCATTTTCTGTTaGGCTGGCAACGATCATCTC +
Preference number: 4 (lower is better)
Translates to: RFFGALTSLRDLLETLLPLSIFC*AGNDHL
Trigger: GAGATGATCGTTGCCAGCCCAACAGAAAATGGACAG...AGGGAGTAGAGTTTCAAGCAAATCTCTTAGACTAGTTAGAGCCCCAAAGAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434998.5
CDS-3UTR CCA 90 bp TCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTAAGACATCAGAAGTCTGTGCCATTCCTGTCTaGGTAGGTGGAATTACACGA +
Preference number: 4 (lower is better)
Translates to: SQCHALTIFTFLSKTSEVCAIPV*VGGITR
Trigger: TCGTGTAATTCCACCTACCCAGACAGGAATGGCACA...GACTTCTGATGTCTTAGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp CTGGGTAGGTGGAATTACACGAAGTACCTGTCCATTTTCTGTTGGGCTGGCAACGAAGAATGTAATTGCTaGTATTGTCTGCTAGAGTAT +
Preference number: 4 (lower is better)
Translates to: LGRWNYTKYLSIFCWAGNEECNC*YCLLEY
Trigger: ATACTCTAGCAGACAATACCAGCAATTACATTCTTC...GTTGCCAGCCCAACAGAAAATGGACAGGTACTTCGTGTAATTCCACCTACCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427712.5
CDS-3UTR CCA 90 bp CTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTCGGTCACTGACTTTTTaGGCAATGGGAAGGATGTTT +
Preference number: 4 (lower is better)
Translates to: LVFSPIISMPRFDYIHLPRSLTF*AMGRMF
Trigger: AAACATCCTTCCCATTGCCCAAAAAGTCAGTGACCG...AGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp TGTTTGATGTCTAAGCCAGCTGATGGAGAAGAACCAATGCAGTATCCCTTCTGGTGGGATTCCATCATATaGAACATACTGGGATTTCCA +
Preference number: 4 (lower is better)
Translates to: CLMSKPADGEEPMQYPFWWDSII*NILGFP
Trigger: TGGAAATCCCAGTATGTTCCATATGATGGAATCCCA...CCAGAAGGGATACTGCATTGGTTCTTCTCCATCAGCTGGCTTAGACATCAAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438828.4
CDS-3UTR CCA 90 bp AGGAAACTTCTGTACCTTTTTAATGTAAATCCGAGCTGGACAAGTGGCTTTGTATCCGAGCTGGACAAGTaGCTTTGTAGAGCTGACAAG +
Preference number: 4 (lower is better)
Translates to: RKLLYLFNVNPSWTSGFVSELDK*LCRADK
Trigger: CTTGTCAGCTCTACAAAGCCACTTGTCCAGCTCGGA...TACAAAGCCACTTGTCCAGCTCGGATTTACATTAAAAAGGTACAGAAGTTTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457031.5
CDS-3UTR CCA 90 bp CAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTAAGACATCAGGAGAGCAAGTGGGTTaGCTCAGGAGACAAAGAACC +
Preference number: 4 (lower is better)
Translates to: QLSQCHALTIFTFLSKTSGEQVG*LRRQRT
Trigger: GGTTCTTTGTCTCCTGAGCCAACCCACTTGCTCTCC...TGATGTCTTAGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp GTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTAAGACAAGTGAGGAGAGCAAGTaGGTTGGCTCAGGAGACAAA +
Preference number: 4 (lower is better)
Translates to: VQLSQCHALTIFTFLSKTSEESK*VGSGDK
Trigger: TTTGTCTCCTGAGCCAACCCACTTGCTCTCCTCACT...TGTCTTAGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp CCTGAAACCAAGTCAATTAAGAATGGGAGGCTGGACTTAGAAAAGCCAAAAGTGATAGCCTGCCCATTTTaGTCCACTAGATGGAATTGC +
Preference number: 4 (lower is better)
Translates to: PETKSIKNGRLDLEKPKVIACPF*STRWNC
Trigger: GCAATTCCATCTAGTGGACCAAAATGGGCAGGCTAT...CACTTTTGGCTTTTCTAAGTCCAGCCTCCCATTCTTAATTGACTTGGTTTCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402905.7
ENST00000438828.4
CDS-3UTR CCA 90 bp AGATTCTTTGGGGCTCTAACTAGTCTAAGAGATTTGCTTGAAACTCTACTCCCTCATTTTCTGTTGGGCTaGCAACGATCATCTCACACC +
Preference number: 4 (lower is better)
Translates to: RFFGALTSLRDLLETLLPHFLLG*QRSSHT
Trigger: GGTGTGAGATGATCGTTGCCAGCCCAACAGAAAATG...AGGGAGTAGAGTTTCAAGCAAATCTCTTAGACTAGTTAGAGCCCCAAAGAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434998.5
CDS-3UTR CCA 90 bp CTCATCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTAAGAAAGCAGATCAGTaGTCTGGTGATGGTGGGGTG +
Preference number: 4 (lower is better)
Translates to: LIKLVFSPIISMPRFDYIKKADQ*SGDGGV
Trigger: CACCCCACCATCACCAGACCACTGATCTGCTTTCTT...AATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGATGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438828.4
3UTR CAA 72 bp TGCTGGTATTGTCTGCTAGAGTATCCACTCTTACAGTaGGTAAGTTTCTGTTACTGGGTTTCTCTTCAGGGA +
Preference number: 4 (lower is better)
Translates to: CWYCLLEYPLLQ*VSFCYWVSLQG
Trigger: TCCCTGAAGAGAAACCCAGTAACAGAAACTTACCAACTGTAAGAGTGGATACTCTAGCAGACAATACCAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427712.5
CDS-3UTR TCA 90 bp CAACTAACCCAGTGTCTGAGAATACTGTATATAACATACCTAATGCTTGAGAACTCCACAAGTTGCCCCTaGGGTATAATCACTTGTGCC +
Preference number: 4 (lower is better)
Translates to: QLTQCLRILYITYLMLENSTSCP*GIITCA
Trigger: GGCACAAGTGATTATACCTCAGGGGCAACTTGTGGA...GTTCTCAAGCATTAGGTATGTTATATACAGTATTCTCAGACACTGGGTTAGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434998.5
ENST00000444724.5
CDS-3UTR TCA 90 bp CAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTAAGACATCACAGCATTCCGGTCACTaGCTTTTTGGGCAATGGGAA +
Preference number: 4 (lower is better)
Translates to: QLSQCHALTIFTFLSKTSQHSGH*LFGQWE
Trigger: TTCCCATTGCCCAAAAAGTCAGTGACCGGAATGCTG...TGATGTCTTAGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR TCA 90 bp CTATACCCAGGTTATGTGCGTAAACATCATGTTACATTGCTTCCAAAAGTATCACAGCATTCCGGTCACTaGCTTTTTGGGCAATGGGAA +
Preference number: 4 (lower is better)
Translates to: LYPGYVRKHHVTLLPKVSQHSGH*LFGQWE
Trigger: TTCCCATTGCCCAAAAAGTCAGTGACCGGAATGCTG...TGATACTTTTGGAAGCAATGTAACATGATGTTTACGCACATAACCTGGGTATAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422368.5
CDS-3UTR TCA 90 bp GTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTAAGACAGTACCTCATCGGGTTTaGACAGTTCCCTTTCCACAA +
Preference number: 4 (lower is better)
Translates to: VQLSQCHALTIFTFLSKTVPHRV*TVPFPQ
Trigger: TTGTGGAAAGGGAACTGTTCAAACCCGATGAGGTAC...TGTCTTAGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR TCA 90 bp TGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTCTGTCTGTAGTCCATTaGAGCGTTGCTGGAATAATC +
Preference number: 4 (lower is better)
Translates to: WSSVQLSQCHALTIFTFLLSVVH*SVAGII
Trigger: GATTATTCCAGCAACGCTTCAATGGACTACAGACAG...AAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR TCA 90 bp TGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTCTGTCATGGTCTCTTTaGGAATATTCCCACTGTCTG +
Preference number: 4 (lower is better)
Translates to: WSSVQLSQCHALTIFTFLLSWSL*EYSHCL
Trigger: CAGACAGTGGGAATATTCTCAAAGAGACCATGACAG...AAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR TCA 90 bp TCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTAAGACATCAGAAGTCCTGTCATGGTCTCTTTaGGAATATTCCCACTGTCTG +
Preference number: 4 (lower is better)
Translates to: SQCHALTIFTFLSKTSEVLSWSL*EYSHCL
Trigger: CAGACAGTGGGAATATTCTCAAAGAGACCATGACAG...GACTTCTGATGTCTTAGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR TCA 90 bp GTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCCTGTCATGGTCTCTTTaGGAATATTCCCACTGTCTG +
Preference number: 4 (lower is better)
Translates to: VFSPIISMPRFDYIHLPFLSWSL*EYSHCL
Trigger: CAGACAGTGGGAATATTCTCAAAGAGACCATGACAG...GAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR TCA 90 bp TTCTCATCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATACCCAACAGAATCCGATaGACAGTTCCTTCCAGATTC +
Preference number: 4 (lower is better)
Translates to: FSSNWSSVQLSQCHALTIPNRIR*TVPSRF
Trigger: GAATCTGGAAGGAACTGTTCATCGGATTCTGTTGGG...TATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGATGAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR TCA 90 bp TCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTCCCAACAGAATCCGATaGACAGTTCCTTCCAGATTC +
Preference number: 4 (lower is better)
Translates to: SSVQLSQCHALTIFTFLSPNRIR*TVPSRF
Trigger: GAATCTGGAAGGAACTGTTCATCGGATTCTGTTGGG...AGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR TCA 90 bp CTCATCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCCCAACAGAATCCGATaGACAGTTCCTTCCAGATTC +
Preference number: 4 (lower is better)
Translates to: LIKLVFSPIISMPRFDYIPNRIR*TVPSRF
Trigger: GAATCTGGAAGGAACTGTTCATCGGATTCTGTTGGG...AATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGATGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR TCA 90 bp CTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTCTCAATGCCACGCTTTaGCTATATTCACCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: LVFSPIISMPRFDYIHLPLNATL*LYSPSF
Trigger: AAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAG...AGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR GCA 90 bp TCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCCACAGCTCTACTCCCTaGATTAACAAATGGGATTCC +
Preference number: 4 (lower is better)
Translates to: SNWSSVQLSQCHALTIFTHSSTP*INKWDS
Trigger: GGAATCCCATTTGTTAATGCAGGGAGTAGAGCTGTG...GGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR GCA 90 bp GTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCCACAGCTCTACTCCCTaGATTAACAAATGGGATTCC +
Preference number: 4 (lower is better)
Translates to: VFSPIISMPRFDYIHLPFHSSTP*INKWDS
Trigger: GGAATCCCATTTGTTAATGCAGGGAGTAGAGCTGTG...GAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR GCA 90 bp TGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTCACAGCTCTACTCCCTaGATTAACAAATGGGATTCC +
Preference number: 4 (lower is better)
Translates to: WSSVQLSQCHALTIFTFLHSSTP*INKWDS
Trigger: GGAATCCCATTTGTTAATGCAGGGAGTAGAGCTGTG...AAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR GCA 90 bp CTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTGCTTCCATAGACAATaGTGGTTCTTTGGGTTCTTG +
Preference number: 4 (lower is better)
Translates to: LVFSPIISMPRFDYIHLPCFHRQ*WFFGFL
Trigger: CAAGAACCCAAAGAACCAGCATTGTCTATGGAAGCA...AGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR GCA 90 bp TGTTTGATGTCTAAGCCAGCTGATGGAGAAGAACCAATGCAGTATCCCTTCTGGGTCCAATTATCTCAATaGCACGCTTTGACTATATTC +
Preference number: 4 (lower is better)
Translates to: CLMSKPADGEEPMQYPFWVQLSQ*HALTIF
Trigger: GAATATAGTCAAAGCGTGGCATTGAGATAATTGGAC...CCAGAAGGGATACTGCATTGGTTCTTCTCCATCAGCTGGCTTAGACATCAAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438828.4
CDS-3UTR GCA 90 bp TCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCATGGAGAAGAACCAATaGAGTATCCCTTCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: SNWSSVQLSQCHALTIFTMEKNQ*SIPSGE
Trigger: CTCTCCAGAAGGGATACTGCATTGGTTCTTCTCCAT...GGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438828.4
CDS-3UTR CCA 90 bp TCATCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCTCCTGTCTGGGTAGGTaGAATTACACGAAGTACCTG +
Preference number: 4 (lower is better)
Translates to: SSNWSSVQLSQCHALTIFSCLGR*NYTKYL
Trigger: CAGGTACTTCGTGTAATTCCACCTACCCAGACAGGA...GAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp CTCATCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTTGTGCCATTCCTGTCTaGGTAGGTGGAATTACACGA +
Preference number: 4 (lower is better)
Translates to: LIKLVFSPIISMPRFDYICAIPV*VGGITR
Trigger: TCGTGTAATTCCACCTACCCAGACAGGAATGGCACA...AATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGATGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp TCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCCGGTCACTGACTTTTTaGGCAATGGGAAGGATGTTT +
Preference number: 4 (lower is better)
Translates to: SNWSSVQLSQCHALTIFTRSLTF*AMGRMF
Trigger: AAACATCCTTCCCATTGCCCAAAAAGTCAGTGACCG...GGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp TGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTCGGTCACTGACTTTTTaGGCAATGGGAAGGATGTTT +
Preference number: 4 (lower is better)
Translates to: WSSVQLSQCHALTIFTFLRSLTF*AMGRMF
Trigger: AAACATCCTTCCCATTGCCCAAAAAGTCAGTGACCG...AAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp CCTGAAACCAAGTCAATTAAGAATGGGAGGCTGGACTTAGAAAAGCCAAAAGTGGAGACAAAGAACCCCTaGTCTGATTTGTTTCCACTT +
Preference number: 4 (lower is better)
Translates to: PETKSIKNGRLDLEKPKVETKNP*SDLFPL
Trigger: AAGTGGAAACAAATCAGACCAGGGGTTCTTTGTCTC...CACTTTTGGCTTTTCTAAGTCCAGCCTCCCATTCTTAATTGACTTGGTTTCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000438828.4
CDS-3UTR CCA 90 bp CAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTAAGACATCAAGTGAGGAGAGCAAGTaGGTTGGCTCAGGAGACAAA +
Preference number: 4 (lower is better)
Translates to: QLSQCHALTIFTFLSKTSSEESK*VGSGDK
Trigger: TTTGTCTCCTGAGCCAACCCACTTGCTCTCCTCACT...TGATGTCTTAGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp TGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTGGACTAGAGGACGGCTaGTTATTTACTGATACCACA +
Preference number: 4 (lower is better)
Translates to: WSSVQLSQCHALTIFTFLGLEDG*LFTDTT
Trigger: TGTGGTATCAGTAAATAACCAGCCGTCCTCTAGTCC...AAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp TCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTAAGACATCAGAAGTCGGACTAGAGGACGGCTaGTTATTTACTGATACCACA +
Preference number: 4 (lower is better)
Translates to: SQCHALTIFTFLSKTSEVGLEDG*LFTDTT
Trigger: TGTGGTATCAGTAAATAACCAGCCGTCCTCTAGTCC...GACTTCTGATGTCTTAGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp GTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCGGACTAGAGGACGGCTaGTTATTTACTGATACCACA +
Preference number: 4 (lower is better)
Translates to: VFSPIISMPRFDYIHLPFGLEDG*LFTDTT
Trigger: TGTGGTATCAGTAAATAACCAGCCGTCCTCTAGTCC...GAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp CCTGAAACCAAGTCAATTAAGAATGGGAGGCTGGACTTAGAAAAGCCAAAAGTGGAAGGTTACCCATGGTaGAGGCAGTACTATTGTTTT +
Preference number: 4 (lower is better)
Translates to: PETKSIKNGRLDLEKPKVEGYPW*RQYYCF
Trigger: AAAACAATAGTACTGCCTCCACCATGGGTAACCTTC...CACTTTTGGCTTTTCTAAGTCCAGCCTCCCATTCTTAATTGACTTGGTTTCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000438828.4
CDS-3UTR CCA 90 bp CTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTGAAGGTTACCCATGGTaGAGGCAGTACTATTGTTTT +
Preference number: 4 (lower is better)
Translates to: LVFSPIISMPRFDYIHLPEGYPW*RQYYCF
Trigger: AAAACAATAGTACTGCCTCCACCATGGGTAACCTTC...AGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp CTCATCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCTGGAAGGTTACCCATaGTGGAGGCAGTACTATTGT +
Preference number: 4 (lower is better)
Translates to: LIKLVFSPIISMPRFDYILEGYP*WRQYYC
Trigger: ACAATAGTACTGCCTCCACCATGGGTAACCTTCCAG...AATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGATGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp TTCTCATCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATACTGGAAGGTTACCCATaGTGGAGGCAGTACTATTGT +
Preference number: 4 (lower is better)
Translates to: FSSNWSSVQLSQCHALTILEGYP*WRQYYC
Trigger: ACAATAGTACTGCCTCCACCATGGGTAACCTTCCAG...TATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGATGAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp GCTAGAGTATCCACTCTTACAGTTGGTAAGTTTCTGTTACTGGGTTTCTCTTCAATAGCCTGCCCATTTTaGTCCACTAGATGGAATTGC +
Preference number: 4 (lower is better)
Translates to: ARVSTLTVGKFLLLGFSSIACPF*STRWNC
Trigger: GCAATTCCATCTAGTGGACCAAAATGGGCAGGCTAT...TGAAGAGAAACCCAGTAACAGAAACTTACCAACTGTAAGAGTGGATACTCTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427712.5
CDS-3UTR CCA 90 bp TTTAATGTAAATCCGAGCTGGACAAGTGGCTTTGTAGAGCTGACAAGACCTGCTTCATCATTTGTGCATTaGATTCCCCCAATGACTGAA +
Preference number: 4 (lower is better)
Translates to: FNVNPSWTSGFVELTRPASSFVH*IPPMTE
Trigger: TTCAGTCATTGGGGGAATCCAATGCACAAATGATGA...AGCAGGTCTTGTCAGCTCTACAAAGCCACTTGTCCAGCTCGGATTTACATTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457031.5
CDS-3UTR CCA 90 bp GTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCCTGTCCATTTTCTGTTaGGCTGGCAACGATCATCAT +
Preference number: 4 (lower is better)
Translates to: VFSPIISMPRFDYIHLPFLSIFC*AGNDHH
Trigger: ATGATGATCGTTGCCAGCCCAACAGAAAATGGACAG...GAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402905.7
ENST00000438828.4
CDS-3UTR CCA 90 bp AAACTCTACTCCCTTAGTAAACAACTAACCCAGTGTCTGAGAATACTGTATATAAGCTTCCCAAATAGCTaGGACTACAGCCCCATGCCA +
Preference number: 4 (lower is better)
Translates to: KLYSLSKQLTQCLRILYISFPNS*DYSPMP
Trigger: TGGCATGGGGCTGTAGTCCCAGCTATTTGGGAAGCT...TATATACAGTATTCTCAGACACTGGGTTAGTTGTTTACTAAGGGAGTAGAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434998.5
ENST00000444724.5
CDS-3UTR TCA 90 bp CTAGAGTATCCACTCTTACAGTTGGTAAGTTTCTGTTACTGGGTTTCTCTTCAGTTGAGCACTGGTTTTTaGCTCTTCACCGTCATTATG +
Preference number: 4 (lower is better)
Translates to: LEYPLLQLVSFCYWVSLQLSTGF*LFTVIM
Trigger: CATAATGACGGTGAAGAGTCAAAAACCAGTGCTCAA...CTGAAGAGAAACCCAGTAACAGAAACTTACCAACTGTAAGAGTGGATACTCTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427712.5
CDS-3UTR TCA 90 bp TCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTGAGCACTGGTTTTTaGCTCTTCACCGTCATTATG +
Preference number: 4 (lower is better)
Translates to: SNWSSVQLSQCHALTIFTLSTGF*LFTVIM
Trigger: CATAATGACGGTGAAGAGTCAAAAACCAGTGCTCAA...GGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR TCA 90 bp AGATTCTTTGGGGCTCTAACTAGTCTAAGAGATTTGCTTGAAACTCTACTCCCTTTGAGCACTGGTTTTTaGCTCTTCACCGTCATTATG +
Preference number: 4 (lower is better)
Translates to: RFFGALTSLRDLLETLLPLSTGF*LFTVIM
Trigger: CATAATGACGGTGAAGAGTCAAAAACCAGTGCTCAA...AGGGAGTAGAGTTTCAAGCAAATCTCTTAGACTAGTTAGAGCCCCAAAGAATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444724.5
CDS-3UTR TCA 90 bp AAACTCTACTCCCTTAGTAAACAACTAACCCAGTGTCTGAGAATACTGTATATATCCACAAGTTGCCCCTaGGGTATAATCACTTGTGCC +
Preference number: 4 (lower is better)
Translates to: KLYSLSKQLTQCLRILYISTSCP*GIITCA
Trigger: GGCACAAGTGATTATACCTCAGGGGCAACTTGTGGA...TATATACAGTATTCTCAGACACTGGGTTAGTTGTTTACTAAGGGAGTAGAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434998.5
ENST00000444724.5
CDS-3UTR TCA 90 bp TCTTGTAAAGATGAAATGGGCATAATTCACAACCAGCAATTCTACTTTAAGGCACAGCATTCCGGTCACTaGCTTTTTGGGCAATGGGAA +
Preference number: 4 (lower is better)
Translates to: SCKDEMGIIHNQQFYFKAQHSGH*LFGQWE
Trigger: TTCCCATTGCCCAAAAAGTCAGTGACCGGAATGCTG...TGCCTTAAAGTAGAATTGCTGGTTGTGAATTATGCCCATTTCATCTTTACAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444724.5
CDS-3UTR TCA 90 bp TCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTAAGACATCAGAAGTCACAGTAGCCACGGTATaGATCTCCAATTTTCTCACA +
Preference number: 4 (lower is better)
Translates to: SQCHALTIFTFLSKTSEVTVATV*ISNFLT
Trigger: TGTGAGAAAATTGGAGATTCATACCGTGGCTACTGT...GACTTCTGATGTCTTAGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR TCA 90 bp AGATTCTTTGGGGCTCTAACTAGTCTAAGAGATTTGCTTGAAACTCTACTCCCTACAGTAGCCACGGTATaGATCTCCAATTTTCTCACA +
Preference number: 4 (lower is better)
Translates to: RFFGALTSLRDLLETLLPTVATV*ISNFLT
Trigger: TGTGAGAAAATTGGAGATTCATACCGTGGCTACTGT...AGGGAGTAGAGTTTCAAGCAAATCTCTTAGACTAGTTAGAGCCCCAAAGAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434998.5
ENST00000444724.5
CDS-3UTR TCA 90 bp CTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTGTGTTTGCTGCTTGTaGAATGTTAGGACACTTTCT +
Preference number: 4 (lower is better)
Translates to: LVFSPIISMPRFDYIHLPCVCCL*NVRTLS
Trigger: AGAAAGTGTCCTAACATTTCACAAGCAGCAAACACA...AGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR TCA 90 bp ACCCAGGTTATGTGCGTAAACATCATGTTACATTGCTTCCAAAAGTATCAATTACTTCTTGGCCCATACTaGCACTCCATTACCACAGCT +
Preference number: 4 (lower is better)
Translates to: TQVMCVNIMLHCFQKYQLLLGPY*HSITTA
Trigger: AGCTGTGGTAATGGAGTGTCAGTATGGGCCAAGAAG...TAATTGATACTTTTGGAAGCAATGTAACATGATGTTTACGCACATAACCTGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422368.5
CDS-3UTR TCA 90 bp GTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCATCTTATGTGCTACTTaGGGATGTAAACGTGAGGGT +
Preference number: 4 (lower is better)
Translates to: VFSPIISMPRFDYIHLPFILCAT*GCKREG
Trigger: ACCCTCACGTTTACATCCTCAAGTAGCACATAAGAT...GAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR TCA 90 bp CCTGAAACCAAGTCAATTAAGAATGGGAGGCTGGACTTAGAAAAGCCAAAAGTGTGCTGGAATAATCTCTaGGTTATATACCGTATCTCC +
Preference number: 4 (lower is better)
Translates to: PETKSIKNGRLDLEKPKVCWNNL*VIYRIS
Trigger: GGAGATACGGTATATAACTCAGAGATTATTCCAGCA...CACTTTTGGCTTTTCTAAGTCCAGCCTCCCATTCTTAATTGACTTGGTTTCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000438828.4
CDS-3UTR TCA 90 bp CTCATCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCTGTCATGGTCTCTTTaGGAATATTCCCACTGTCTG +
Preference number: 4 (lower is better)
Translates to: LIKLVFSPIISMPRFDYILSWSL*EYSHCL
Trigger: CAGACAGTGGGAATATTCTCAAAGAGACCATGACAG...AATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGATGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR TCA 90 bp TGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTCTCAATGCCACGCTTTaGCTATATTCACCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: WSSVQLSQCHALTIFTFLLNATL*LYSPSF
Trigger: AAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAG...AAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR TCA 90 bp GTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCCTCAATGCCACGCTTTaGCTATATTCACCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: VFSPIISMPRFDYIHLPFLNATL*LYSPSF
Trigger: AAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAG...GAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR TCA 90 bp AAACTCTACTCCCTTAGTAAACAACTAACCCAGTGTCTGAGAATACTGTATATACTCAGAGGTCCAGGATaGAACTGCAACTCTTTCAGC +
Preference number: 4 (lower is better)
Translates to: KLYSLSKQLTQCLRILYILRGPG*NCNSFS
Trigger: GCTGAAAGAGTTGCAGTTTCATCCTGGACCTCTGAG...TATATACAGTATTCTCAGACACTGGGTTAGTTGTTTACTAAGGGAGTAGAGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434998.5
ENST00000444724.5
CDS-3UTR GCA 90 bp GTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTCCACTAGATGGAATTaGTCTGCAGAAAGAGTCTGT +
Preference number: 4 (lower is better)
Translates to: VFSPIISMPRFDYIHLPFSTRWN*SAERVC
Trigger: ACAGACTCTTTCTGCAGAGCAATTCCATCTAGTGGA...GAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402905.7
ENST00000438828.4
CDS-3UTR CCA 90 bp CTGAGGTATAATCACTTGTGCCATTCCTGTCTGGGTAGGTGGAATTACACGAAGTCTTCACCGTCATTATaGTTGACTCTTAATGAATCA +
Preference number: 4 (lower is better)
Translates to: LRYNHLCHSCLGRWNYTKSSPSL*LTLNES
Trigger: TGATTCATTAAGAGTCAACCATAATGACGGTGAAGA...CTTCGTGTAATTCCACCTACCCAGACAGGAATGGCACAAGTGATTATACCTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427712.5
CDS-3UTR CCA 90 bp CAACTAACCCAGTGTCTGAGAATACTGTATATAACATACCTAATGCTTGAGAACTCCTGTCTGGGTAGGTaGAATTACACGAAGTACCTG +
Preference number: 4 (lower is better)
Translates to: QLTQCLRILYITYLMLENSCLGR*NYTKYL
Trigger: CAGGTACTTCGTGTAATTCCACCTACCCAGACAGGA...GTTCTCAAGCATTAGGTATGTTATATACAGTATTCTCAGACACTGGGTTAGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434998.5
ENST00000444724.5
CDS-3UTR CCA 90 bp CAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTAAGACATCATGTGCCATTCCTGTCTaGGTAGGTGGAATTACACGA +
Preference number: 4 (lower is better)
Translates to: QLSQCHALTIFTFLSKTSCAIPV*VGGITR
Trigger: TCGTGTAATTCCACCTACCCAGACAGGAATGGCACA...TGATGTCTTAGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp TTCTCATCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATACGGTCACTGACTTTTTaGGCAATGGGAAGGATGTTT +
Preference number: 4 (lower is better)
Translates to: FSSNWSSVQLSQCHALTIRSLTF*AMGRMF
Trigger: AAACATCCTTCCCATTGCCCAAAAAGTCAGTGACCG...TATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGATGAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp GTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTAAGACATGTATTAGAAGAAAGTaGCTGAAGAGGCCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: VQLSQCHALTIFTFLSKTCIRRK*LKRPQK
Trigger: CTTCTGGGGCCTCTTCAGCCACTTTCTTCTAATACA...TGTCTTAGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp TTCTCATCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATGTATTAGAAGAAAGTaGCTGAAGAGGCCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: FSSNWSSVQLSQCHALTICIRRK*LKRPQK
Trigger: CTTCTGGGGCCTCTTCAGCCACTTTCTTCTAATACA...TATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGATGAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp AGGAAACTTCTGTACCTTTTTAATGTAAATCCGAGCTGGACAAGTGGCTTTGTATGTATTAGAAGAAAGTaGCTGAAGAGGCCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: RKLLYLFNVNPSWTSGFVCIRRK*LKRPQK
Trigger: CTTCTGGGGCCTCTTCAGCCACTTTCTTCTAATACA...TACAAAGCCACTTGTCCAGCTCGGATTTACATTAAAAAGGTACAGAAGTTTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457031.5
CDS-3UTR CCA 90 bp CTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTGGGATTCCATCATATaGAACATACTGGGATTTCCA +
Preference number: 4 (lower is better)
Translates to: LVFSPIISMPRFDYIHLPWDSII*NILGFP
Trigger: TGGAAATCCCAGTATGTTCCATATGATGGAATCCCA...AGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp GTTCAGACTATATTACTGTGGATAAATTCAGAACAGCTTTTGAAATACTGGCCTTCCGAGCTGGACAAGTaGCTTTGTAGAGCTGACAAG +
Preference number: 4 (lower is better)
Translates to: VQTILLWINSEQLLKYWPSELDK*LCRADK
Trigger: CTTGTCAGCTCTACAAAGCCACTTGTCCAGCTCGGA...AGGCCAGTATTTCAAAAGCTGTTCTGAATTTATCCACAGTAATATAGTCTGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp TCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCAATGTAAATCCGAGCTaGACAAGTGGCTTTGTAGAG +
Preference number: 4 (lower is better)
Translates to: SNWSSVQLSQCHALTIFTNVNPS*TSGFVE
Trigger: CTCTACAAAGCCACTTGTCCAGCTCGGATTTACATT...GGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp TTGGGCCTATACCCAGGTTATGTGCGTAAACATCATGTTACATTGCTTCCAAAAAATGTAAATCCGAGCTaGACAAGTGGCTTTGTAGAG +
Preference number: 4 (lower is better)
Translates to: LGLYPGYVRKHHVTLLPKNVNPS*TSGFVE
Trigger: CTCTACAAAGCCACTTGTCCAGCTCGGATTTACATT...TTTTGGAAGCAATGTAACATGATGTTTACGCACATAACCTGGGTATAGGCCCAA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000422368.5
CDS-3UTR CCA 90 bp GTTCAGACTATATTACTGTGGATAAATTCAGAACAGCTTTTGAAATACTGGCCTAGTGAGGAGAGCAAGTaGGTTGGCTCAGGAGACAAA +
Preference number: 4 (lower is better)
Translates to: VQTILLWINSEQLLKYWPSEESK*VGSGDK
Trigger: TTTGTCTCCTGAGCCAACCCACTTGCTCTCCTCACT...AGGCCAGTATTTCAAAAGCTGTTCTGAATTTATCCACAGTAATATAGTCTGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp CTCATCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTGGACTAGAGGACGGCTaGTTATTTACTGATACCACA +
Preference number: 4 (lower is better)
Translates to: LIKLVFSPIISMPRFDYIGLEDG*LFTDTT
Trigger: TGTGGTATCAGTAAATAACCAGCCGTCCTCTAGTCC...AATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGATGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp AGAAGAACCAATGCAGTATCCCTTCTGGAGAGATTAAGATTTTCAAGGTCCTCAGAAGGTTACCCATGGTaGAGGCAGTACTATTGTTTT +
Preference number: 4 (lower is better)
Translates to: RRTNAVSLLERLRFSRSSEGYPW*RQYYCF
Trigger: AAAACAATAGTACTGCCTCCACCATGGGTAACCTTC...TGAGGACCTTGAAAATCTTAATCTCTCCAGAAGGGATACTGCATTGGTTCTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438828.4
CDS-3UTR CCA 90 bp CAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTAAGACATCACTGGAAGGTTACCCATaGTGGAGGCAGTACTATTGT +
Preference number: 4 (lower is better)
Translates to: QLSQCHALTIFTFLSKTSLEGYP*WRQYYC
Trigger: ACAATAGTACTGCCTCCACCATGGGTAACCTTCCAG...TGATGTCTTAGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp TGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTATTTTGATCTGGTTCTaGAAGGTTACCCATGGTGGA +
Preference number: 4 (lower is better)
Translates to: WSSVQLSQCHALTIFTFLILIWF*KVTHGG
Trigger: TCCACCATGGGTAACCTTCCAGAACCAGATCAAAAT...AAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp TCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTATAGCCTGCCCATTTTaGTCCACTAGATGGAATTGC +
Preference number: 4 (lower is better)
Translates to: SSVQLSQCHALTIFTFLSIACPF*STRWNC
Trigger: GCAATTCCATCTAGTGGACCAAAATGGGCAGGCTAT...AGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402905.7
ENST00000438828.4
CDS-3UTR CCA 90 bp GTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCCATTTTCTGTTGGGCTaGCAACGATCATCATTTGTG +
Preference number: 4 (lower is better)
Translates to: VFSPIISMPRFDYIHLPFHFLLG*QRSSFV
Trigger: CACAAATGATGATCGTTGCCAGCCCAACAGAAAATG...GAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402905.7
ENST00000438828.4
CDS-3UTR CCA 90 bp TTGGGCCTATACCCAGGTTATGTGCGTAAACATCATGTTACATTGCTTCCAAAACATTTTCTGTTGGGCTaGCAACGATCATCATTTGTG +
Preference number: 4 (lower is better)
Translates to: LGLYPGYVRKHHVTLLPKHFLLG*QRSSFV
Trigger: CACAAATGATGATCGTTGCCAGCCCAACAGAAAATG...TTTTGGAAGCAATGTAACATGATGTTTACGCACATAACCTGGGTATAGGCCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422368.5
CDS-3UTR CCA 90 bp TGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTCATTTTCTGTTGGGCTaGCAACGATCATCATTTGTG +
Preference number: 4 (lower is better)
Translates to: WSSVQLSQCHALTIFTFLHFLLG*QRSSFV
Trigger: CACAAATGATGATCGTTGCCAGCCCAACAGAAAATG...AAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402905.7
ENST00000438828.4
CDS-3UTR CCA 90 bp AGATTCTTTGGGGCTCTAACTAGTCTAAGAGATTTGCTTGAAACTCTACTCCCTCATTTTCTGTTGGGCTaGCAACGATCATCATTTGTG +
Preference number: 4 (lower is better)
Translates to: RFFGALTSLRDLLETLLPHFLLG*QRSSFV
Trigger: CACAAATGATGATCGTTGCCAGCCCAACAGAAAATG...AGGGAGTAGAGTTTCAAGCAAATCTCTTAGACTAGTTAGAGCCCCAAAGAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444724.5
CDS-3UTR CCA 90 bp TCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTCTGTCCATTTTCTGTTaGGCTGGCAACGATCATCAT +
Preference number: 4 (lower is better)
Translates to: SSVQLSQCHALTIFTFLSLSIFC*AGNDHH
Trigger: ATGATGATCGTTGCCAGCCCAACAGAAAATGGACAG...AGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402905.7
ENST00000438828.4
CDS-3UTR TCA 90 bp TCATCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCTTGAGCACTGGTTTTTaGCTCTTCACCGTCATTATG +
Preference number: 4 (lower is better)
Translates to: SSNWSSVQLSQCHALTIFLSTGF*LFTVIM
Trigger: CATAATGACGGTGAAGAGTCAAAAACCAGTGCTCAA...GAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR TCA 90 bp TCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTTTGAGCACTGGTTTTTaGCTCTTCACCGTCATTATG +
Preference number: 4 (lower is better)
Translates to: SSVQLSQCHALTIFTFLSLSTGF*LFTVIM
Trigger: CATAATGACGGTGAAGAGTCAAAAACCAGTGCTCAA...AGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR TCA 90 bp TCATCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACAGTAGCCACGGTATaGATCTCCAATTTTCTCACA +
Preference number: 4 (lower is better)
Translates to: SSNWSSVQLSQCHALTIFTVATV*ISNFLT
Trigger: TGTGAGAAAATTGGAGATTCATACCGTGGCTACTGT...GAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR TCA 90 bp ACAAATTTTCTAGTAAATAAGAGAGCTTGGGCCTATACCCAGGTTATGTGCGTAACAGTAGCCACGGTATaGATCTCCAATTTTCTCACA +
Preference number: 4 (lower is better)
Translates to: TNFLVNKRAWAYTQVMCVTVATV*ISNFLT
Trigger: TGTGAGAAAATTGGAGATTCATACCGTGGCTACTGT...TACGCACATAACCTGGGTATAGGCCCAAGCTCTCTTATTTACTAGAAAATTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422368.5
CDS-3UTR TCA 90 bp TCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTACAGTAGCCACGGTATaGATCTCCAATTTTCTCACA +
Preference number: 4 (lower is better)
Translates to: SSVQLSQCHALTIFTFLSTVATV*ISNFLT
Trigger: TGTGAGAAAATTGGAGATTCATACCGTGGCTACTGT...AGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR TCA 90 bp TCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTGTGTTTGCTGCTTGTaGAATGTTAGGACACTTTCT +
Preference number: 4 (lower is better)
Translates to: SNWSSVQLSQCHALTIFTCVCCL*NVRTLS
Trigger: AGAAAGTGTCCTAACATTTCACAAGCAGCAAACACA...GGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR TCA 90 bp TGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTGTGTTTGCTGCTTGTaGAATGTTAGGACACTTTCT +
Preference number: 4 (lower is better)
Translates to: WSSVQLSQCHALTIFTFLCVCCL*NVRTLS
Trigger: AGAAAGTGTCCTAACATTTCACAAGCAGCAAACACA...AAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR TCA 90 bp TTCTCATCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATAATCTTATGTGCTACTTaGGGATGTAAACGTGAGGGT +
Preference number: 4 (lower is better)
Translates to: FSSNWSSVQLSQCHALTIILCAT*GCKREG
Trigger: ACCCTCACGTTTACATCCTCAAGTAGCACATAAGAT...TATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGATGAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR TCA 90 bp GTTCAGACTATATTACTGTGGATAAATTCAGAACAGCTTTTGAAATACTGGCCTGTACCTCATCGGGTTTaGACAGTTCCCTTTCCACAA +
Preference number: 4 (lower is better)
Translates to: VQTILLWINSEQLLKYWPVPHRV*TVPFPQ
Trigger: TTGTGGAAAGGGAACTGTTCAAACCCGATGAGGTAC...AGGCCAGTATTTCAAAAGCTGTTCTGAATTTATCCACAGTAATATAGTCTGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR TCA 90 bp TCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTGCTGGAATAATCTCTaGGTTATATACCGTATCTCC +
Preference number: 4 (lower is better)
Translates to: SNWSSVQLSQCHALTIFTCWNNL*VIYRIS
Trigger: GGAGATACGGTATATAACTCAGAGATTATTCCAGCA...GGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR TCA 90 bp TCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTAAGACATCAGAAGTCTGCTGGAATAATCTCTaGGTTATATACCGTATCTCC +
Preference number: 4 (lower is better)
Translates to: SQCHALTIFTFLSKTSEVCWNNL*VIYRIS
Trigger: GGAGATACGGTATATAACTCAGAGATTATTCCAGCA...GACTTCTGATGTCTTAGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR TCA 90 bp CAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTAAGACATCACTGTCTGTAGTCCATTaGAGCGTTGCTGGAATAATC +
Preference number: 4 (lower is better)
Translates to: QLSQCHALTIFTFLSKTSLSVVH*SVAGII
Trigger: GATTATTCCAGCAACGCTTCAATGGACTACAGACAG...TGATGTCTTAGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR TCA 90 bp GTTCAGACTATATTACTGTGGATAAATTCAGAACAGCTTTTGAAATACTGGCCTCCCAACAGAATCCGATaGACAGTTCCTTCCAGATTC +
Preference number: 4 (lower is better)
Translates to: VQTILLWINSEQLLKYWPPNRIR*TVPSRF
Trigger: GAATCTGGAAGGAACTGTTCATCGGATTCTGTTGGG...AGGCCAGTATTTCAAAAGCTGTTCTGAATTTATCCACAGTAATATAGTCTGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR TCA 90 bp TCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTAAGACATCAGAAGTCAGATGCTCAAATACTTaGGCACTGGTTTTTGACTCT +
Preference number: 4 (lower is better)
Translates to: SQCHALTIFTFLSKTSEVRCSNT*ALVFDS
Trigger: AGAGTCAAAAACCAGTGCTCAAGTATTTGAGCATCT...GACTTCTGATGTCTTAGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402905.7
ENST00000438828.4
CDS-3UTR TCA 90 bp GTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCAGATGCTCAAATACTTaGGCACTGGTTTTTGACTCT +
Preference number: 4 (lower is better)
Translates to: VFSPIISMPRFDYIHLPFRCSNT*ALVFDS
Trigger: AGAGTCAAAAACCAGTGCTCAAGTATTTGAGCATCT...GAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402905.7
ENST00000438828.4
CDS-3UTR TCA 90 bp AGGGGCCCTGGTATATTCTGTGATATGAGTGAATTATTTGCTTCACGAGTAGTGATTGGATTCCCCCAATaGCTGAAGTTCATATTGAAT +
Preference number: 4 (lower is better)
Translates to: RGPGIFCDMSELFASRVVIGFPQ*LKFILN
Trigger: ATTCAATATGAACTTCAGTCATTGGGGGAATCCAAT...CACTACTCGTGAAGCAAATAATTCACTCATATCACAGAATATACCAGGGCCCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427712.5
CDS-3UTR TCA 90 bp CTGTACCTTTTTAATGTAAATCCGAGCTGGACAAGTGGCTTTGTAGAGCTGACAATTGGATTCCCCCAATaGCTGAAGTTCATATTGAAT +
Preference number: 4 (lower is better)
Translates to: LYLFNVNPSWTSGFVELTIGFPQ*LKFILN
Trigger: ATTCAATATGAACTTCAGTCATTGGGGGAATCCAAT...TGTCAGCTCTACAAAGCCACTTGTCCAGCTCGGATTTACATTAAAAAGGTACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000457031.5
CDS-3UTR TCA 90 bp AGATTCTTTGGGGCTCTAACTAGTCTAAGAGATTTGCTTGAAACTCTACTCCCTAGGAAAATCACATTTTaGCAATGGACTATGGCTGCT +
Preference number: 4 (lower is better)
Translates to: RFFGALTSLRDLLETLLPRKITF*QWTMAA
Trigger: AGCAGCCATAGTCCATTGTCAAAATGTGATTTTCCT...AGGGAGTAGAGTTTCAAGCAAATCTCTTAGACTAGTTAGAGCCCCAAAGAATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000434998.5
ENST00000444724.5
CDS-3UTR GCA 90 bp CTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTGATGAAGAATGTAATTaGTGGTATTGTCTGCTAGAG +
Preference number: 4 (lower is better)
Translates to: LVFSPIISMPRFDYIHLPDEECN*WYCLLE
Trigger: CTCTAGCAGACAATACCAGCAATTACATTCTTCATC...AGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR GCA 90 bp CTATACCCAGGTTATGTGCGTAAACATCATGTTACATTGCTTCCAAAAGTATCACACAGCTCTACTCCCTaGATTAACAAATGGGATTCC +
Preference number: 4 (lower is better)
Translates to: LYPGYVRKHHVTLLPKVSHSSTP*INKWDS
Trigger: GGAATCCCATTTGTTAATGCAGGGAGTAGAGCTGTG...TGATACTTTTGGAAGCAATGTAACATGATGTTTACGCACATAACCTGGGTATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422368.5
CDS-3UTR GCA 90 bp TCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTAAGACATCAGAAGTCTACCTTGGTTGTAACTaGAAACCCTGTAGTTGTGTA +
Preference number: 4 (lower is better)
Translates to: SQCHALTIFTFLSKTSEVYLGCN*KPCSCV
Trigger: TACACAACTACAGGGTTTGCAGTTACAACCAAGGTA...GACTTCTGATGTCTTAGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR GCA 90 bp GTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTACCTTGGTTGTAACTaGAAACCCTGTAGTTGTGTA +
Preference number: 4 (lower is better)
Translates to: VFSPIISMPRFDYIHLPFYLGCN*KPCSCV
Trigger: TACACAACTACAGGGTTTGCAGTTACAACCAAGGTA...GAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR GCA 90 bp TGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTGTATTGGAATAGTCTaGACATCTCCCAACAGAATC +
Preference number: 4 (lower is better)
Translates to: WSSVQLSQCHALTIFTFLCIGIV*TSPNRI
Trigger: GATTCTGTTGGGAGATGTGCAGACTATTCCAATACA...AAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR GCA 90 bp TCATCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCTGCTTCCATAGACAATaGTGGTTCTTTGGGTTCTTG +
Preference number: 4 (lower is better)
Translates to: SSNWSSVQLSQCHALTIFCFHRQ*WFFGFL
Trigger: CAAGAACCCAAAGAACCAGCATTGTCTATGGAAGCA...GAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR GCA 90 bp TTCTCATCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATGCTTCCATAGACAATaGTGGTTCTTTGGGTTCTTG +
Preference number: 4 (lower is better)
Translates to: FSSNWSSVQLSQCHALTICFHRQ*WFFGFL
Trigger: CAAGAACCCAAAGAACCAGCATTGTCTATGGAAGCA...TATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGATGAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR GCA 90 bp CCTGAAACCAAGTCAATTAAGAATGGGAGGCTGGACTTAGAAAAGCCAAAAGTGGTCCAATTATCTCAATaGCACGCTTTGACTATATTC +
Preference number: 4 (lower is better)
Translates to: PETKSIKNGRLDLEKPKVVQLSQ*HALTIF
Trigger: GAATATAGTCAAAGCGTGGCATTGAGATAATTGGAC...CACTTTTGGCTTTTCTAAGTCCAGCCTCCCATTCTTAATTGACTTGGTTTCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000438828.4
CDS-3UTR GCA 90 bp TTCTCATCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATCCACTAGATGGAATTaGTCTGCAGAAAGAGTCTGT +
Preference number: 4 (lower is better)
Translates to: FSSNWSSVQLSQCHALTISTRWN*SAERVC
Trigger: ACAGACTCTTTCTGCAGAGCAATTCCATCTAGTGGA...TATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGATGAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402905.7
ENST00000438828.4
CDS-3UTR GCA 90 bp AGGAAACTTCTGTACCTTTTTAATGTAAATCCGAGCTGGACAAGTGGCTTTGTATCCACTAGATGGAATTaGTCTGCAGAAAGAGTCTGT +
Preference number: 4 (lower is better)
Translates to: RKLLYLFNVNPSWTSGFVSTRWN*SAERVC
Trigger: ACAGACTCTTTCTGCAGAGCAATTCCATCTAGTGGA...TACAAAGCCACTTGTCCAGCTCGGATTTACATTAAAAAGGTACAGAAGTTTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457031.5
CDS-3UTR CCA 90 bp GTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCCAAATACTTGAGCACTaGTTTTTGACTCTTCACCGT +
Preference number: 4 (lower is better)
Translates to: VFSPIISMPRFDYIHLPFQILEH*FLTLHR
Trigger: ACGGTGAAGAGTCAAAAACCAGTGCTCAAGTATTTG...GAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp TCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTAAGACATCAGAAGTCCATTTTCTGTTGGGCTaGCAACGATCATCTCAAATA +
Preference number: 4 (lower is better)
Translates to: SQCHALTIFTFLSKTSEVHFLLG*QRSSQI
Trigger: TATTTGAGATGATCGTTGCCAGCCCAACAGAAAATG...GACTTCTGATGTCTTAGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320443.12
ENST00000428585.5
CDS-3UTR CCA 90 bp GTTCAGACTATATTACTGTGGATAAATTCAGAACAGCTTTTGAAATACTGGCCTCTGTCCATTTTCTGTTaGGCTGGCAACGATCATCTC +
Preference number: 4 (lower is better)
Translates to: VQTILLWINSEQLLKYWPLSIFC*AGNDHL
Trigger: GAGATGATCGTTGCCAGCCCAACAGAAAATGGACAG...AGGCCAGTATTTCAAAAGCTGTTCTGAATTTATCCACAGTAATATAGTCTGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320443.12
ENST00000428585.5
CDS-3UTR CCA 90 bp GTTCAGACTATATTACTGTGGATAAATTCAGAACAGCTTTTGAAATACTGGCCTTCCTGTCTGGGTAGGTaGAATTACACGAAGTACCTG +
Preference number: 4 (lower is better)
Translates to: VQTILLWINSEQLLKYWPSCLGR*NYTKYL
Trigger: CAGGTACTTCGTGTAATTCCACCTACCCAGACAGGA...AGGCCAGTATTTCAAAAGCTGTTCTGAATTTATCCACAGTAATATAGTCTGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp TATACCCAGGTTATGTGCGTAAACATCATGTTACATTGCTTCCAAAAGTATCAATCCTGTCTGGGTAGGTaGAATTACACGAAGTACCTG +
Preference number: 4 (lower is better)
Translates to: YTQVMCVNIMLHCFQKYQSCLGR*NYTKYL
Trigger: CAGGTACTTCGTGTAATTCCACCTACCCAGACAGGA...TTGATACTTTTGGAAGCAATGTAACATGATGTTTACGCACATAACCTGGGTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422368.5
CDS-3UTR CCA 90 bp AAACTCTACTCCCTTAGTAAACAACTAACCCAGTGTCTGAGAATACTGTATATATCCTGTCTGGGTAGGTaGAATTACACGAAGTACCTG +
Preference number: 4 (lower is better)
Translates to: KLYSLSKQLTQCLRILYISCLGR*NYTKYL
Trigger: CAGGTACTTCGTGTAATTCCACCTACCCAGACAGGA...TATATACAGTATTCTCAGACACTGGGTTAGTTGTTTACTAAGGGAGTAGAGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434998.5
ENST00000444724.5
CDS-3UTR CCA 90 bp AAACTCTACTCCCTTAGTAAACAACTAACCCAGTGTCTGAGAATACTGTATATATGTGCCATTCCTGTCTaGGTAGGTGGAATTACACGA +
Preference number: 4 (lower is better)
Translates to: KLYSLSKQLTQCLRILYICAIPV*VGGITR
Trigger: TCGTGTAATTCCACCTACCCAGACAGGAATGGCACA...TATATACAGTATTCTCAGACACTGGGTTAGTTGTTTACTAAGGGAGTAGAGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434998.5
ENST00000444724.5
CDS-3UTR CCA 90 bp TCTTGTAAAGATGAAATGGGCATAATTCACAACCAGCAATTCTACTTTAAGGCATGTGCCATTCCTGTCTaGGTAGGTGGAATTACACGA +
Preference number: 4 (lower is better)
Translates to: SCKDEMGIIHNQQFYFKACAIPV*VGGITR
Trigger: TCGTGTAATTCCACCTACCCAGACAGGAATGGCACA...TGCCTTAAAGTAGAATTGCTGGTTGTGAATTATGCCCATTTCATCTTTACAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444724.5
CDS-3UTR CCA 90 bp TGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTGTAAGTTTCTGTTACTaGGTTTCTCTTCAGGGACAT +
Preference number: 4 (lower is better)
Translates to: WSSVQLSQCHALTIFTFLVSFCY*VSLQGH
Trigger: ATGTCCCTGAAGAGAAACCCAGTAACAGAAACTTAC...AAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp TTGGGCCTATACCCAGGTTATGTGCGTAAACATCATGTTACATTGCTTCCAAAAGTAAGTTTCTGTTACTaGGTTTCTCTTCAGGGACAT +
Preference number: 4 (lower is better)
Translates to: LGLYPGYVRKHHVTLLPKVSFCY*VSLQGH
Trigger: ATGTCCCTGAAGAGAAACCCAGTAACAGAAACTTAC...TTTTGGAAGCAATGTAACATGATGTTTACGCACATAACCTGGGTATAGGCCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422368.5
CDS-3UTR CCA 90 bp GTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCGTAAGTTTCTGTTACTaGGTTTCTCTTCAGGGACAT +
Preference number: 4 (lower is better)
Translates to: VFSPIISMPRFDYIHLPFVSFCY*VSLQGH
Trigger: ATGTCCCTGAAGAGAAACCCAGTAACAGAAACTTAC...GAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp CTATACCCAGGTTATGTGCGTAAACATCATGTTACATTGCTTCCAAAAGTATCACGGTCACTGACTTTTTaGGCAATGGGAAGGATGTTT +
Preference number: 4 (lower is better)
Translates to: LYPGYVRKHHVTLLPKVSRSLTF*AMGRMF
Trigger: AAACATCCTTCCCATTGCCCAAAAAGTCAGTGACCG...TGATACTTTTGGAAGCAATGTAACATGATGTTTACGCACATAACCTGGGTATAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422368.5
CDS-3UTR CCA 90 bp CAACTAACCCAGTGTCTGAGAATACTGTATATAACATACCTAATGCTTGAGAACCGGTCACTGACTTTTTaGGCAATGGGAAGGATGTTT +
Preference number: 4 (lower is better)
Translates to: QLTQCLRILYITYLMLENRSLTF*AMGRMF
Trigger: AAACATCCTTCCCATTGCCCAAAAAGTCAGTGACCG...GTTCTCAAGCATTAGGTATGTTATATACAGTATTCTCAGACACTGGGTTAGTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434998.5
ENST00000444724.5
CDS-3UTR CCA 90 bp CTATACCCAGGTTATGTGCGTAAACATCATGTTACATTGCTTCCAAAAGTATCATGTATTAGAAGAAAGTaGCTGAAGAGGCCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: LYPGYVRKHHVTLLPKVSCIRRK*LKRPQK
Trigger: CTTCTGGGGCCTCTTCAGCCACTTTCTTCTAATACA...TGATACTTTTGGAAGCAATGTAACATGATGTTTACGCACATAACCTGGGTATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422368.5
CDS-3UTR CCA 90 bp TCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTAAGACATCAGAAGTCTCATATGGAACATACTaGGATTTCCACATCAAGCGT +
Preference number: 4 (lower is better)
Translates to: SQCHALTIFTFLSKTSEVSYGTY*DFHIKR
Trigger: ACGCTTGATGTGGAAATCCCAGTATGTTCCATATGA...GACTTCTGATGTCTTAGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp AGATTCTTTGGGGCTCTAACTAGTCTAAGAGATTTGCTTGAAACTCTACTCCCTTCATATGGAACATACTaGGATTTCCACATCAAGCGT +
Preference number: 4 (lower is better)
Translates to: RFFGALTSLRDLLETLLPSYGTY*DFHIKR
Trigger: ACGCTTGATGTGGAAATCCCAGTATGTTCCATATGA...AGGGAGTAGAGTTTCAAGCAAATCTCTTAGACTAGTTAGAGCCCCAAAGAATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434998.5
ENST00000444724.5
CDS-3UTR CCA 90 bp GTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTGGGATTCCATCATATaGAACATACTGGGATTTCCA +
Preference number: 4 (lower is better)
Translates to: VFSPIISMPRFDYIHLPFWDSII*NILGFP
Trigger: TGGAAATCCCAGTATGTTCCATATGATGGAATCCCA...GAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp AGATTCTTTGGGGCTCTAACTAGTCTAAGAGATTTGCTTGAAACTCTACTCCCTTGGGATTCCATCATATaGAACATACTGGGATTTCCA +
Preference number: 4 (lower is better)
Translates to: RFFGALTSLRDLLETLLPWDSII*NILGFP
Trigger: TGGAAATCCCAGTATGTTCCATATGATGGAATCCCA...AGGGAGTAGAGTTTCAAGCAAATCTCTTAGACTAGTTAGAGCCCCAAAGAATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434998.5
ENST00000444724.5
CDS-3UTR CCA 90 bp TCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTAAGACATCAGAAGTCCCCTGCATTAACAAATaGGATTCCATCATATGGAAC +
Preference number: 4 (lower is better)
Translates to: SQCHALTIFTFLSKTSEVPCINK*DSIIWN
Trigger: GTTCCATATGATGGAATCCCATTTGTTAATGCAGGG...GACTTCTGATGTCTTAGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp GTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCCCCTGCATTAACAAATaGGATTCCATCATATGGAAC +
Preference number: 4 (lower is better)
Translates to: VFSPIISMPRFDYIHLPFPCINK*DSIIWN
Trigger: GTTCCATATGATGGAATCCCATTTGTTAATGCAGGG...GAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp TCATCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCAATGTAAATCCGAGCTaGACAAGTGGCTTTGTAGAG +
Preference number: 4 (lower is better)
Translates to: SSNWSSVQLSQCHALTIFNVNPS*TSGFVE
Trigger: CTCTACAAAGCCACTTGTCCAGCTCGGATTTACATT...GAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp TTCTCATCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATAGAGACAAAGAACCCCTaGTCTGATTTGTTTCCACTT +
Preference number: 4 (lower is better)
Translates to: FSSNWSSVQLSQCHALTIETKNP*SDLFPL
Trigger: AAGTGGAAACAAATCAGACCAGGGGTTCTTTGTCTC...TATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGATGAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp TCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTGAAGGTTACCCATGGTaGAGGCAGTACTATTGTTTT +
Preference number: 4 (lower is better)
Translates to: SSVQLSQCHALTIFTFLSEGYPW*RQYYCF
Trigger: AAAACAATAGTACTGCCTCCACCATGGGTAACCTTC...AGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp TTCTCATCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATAATTTTGATCTGGTTCTaGAAGGTTACCCATGGTGGA +
Preference number: 4 (lower is better)
Translates to: FSSNWSSVQLSQCHALTIILIWF*KVTHGG
Trigger: TCCACCATGGGTAACCTTCCAGAACCAGATCAAAAT...TATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGATGAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp CTCATCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTATTTTGATCTGGTTCTaGAAGGTTACCCATGGTGGA +
Preference number: 4 (lower is better)
Translates to: LIKLVFSPIISMPRFDYIILIWF*KVTHGG
Trigger: TCCACCATGGGTAACCTTCCAGAACCAGATCAAAAT...AATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGATGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp CCTGAAACCAAGTCAATTAAGAATGGGAGGCTGGACTTAGAAAAGCCAAAAGTGGTCTATAATCTGTATTaGAATAGTCTGCACATCTCC +
Preference number: 4 (lower is better)
Translates to: PETKSIKNGRLDLEKPKVVYNLY*NSLHIS
Trigger: GGAGATGTGCAGACTATTCCAATACAGATTATAGAC...CACTTTTGGCTTTTCTAAGTCCAGCCTCCCATTCTTAATTGACTTGGTTTCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000438828.4
CDS-3UTR CCA 90 bp CTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCCATAGACAATGCTaGTTCTTTGGGTTCTTGTTT +
Preference number: 4 (lower is better)
Translates to: LVFSPIISMPRFDYIHLPFHRQC*FFGFLF
Trigger: AAACAAGAACCCAAAGAACCAGCATTGTCTATGGAA...AGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp AGAAGAACCAATGCAGTATCCCTTCTGGAGAGATTAAGATTTTCAAGGTCCTCACACAGATGTAGCTGCTaGACTTTGTGTTATGATGTA +
Preference number: 4 (lower is better)
Translates to: RRTNAVSLLERLRFSRSSHRCSC*TLCYDV
Trigger: TACATCATAACACAAAGTCCAGCAGCTACATCTGTG...TGAGGACCTTGAAAATCTTAATCTCTCCAGAAGGGATACTGCATTGGTTCTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438828.4
CDS-3UTR CCA 90 bp TTGGGCCTATACCCAGGTTATGTGCGTAAACATCATGTTACATTGCTTCCAAAACAAAGGAAGAATCCCTaGAGTCCATACAGATTAGAT +
Preference number: 4 (lower is better)
Translates to: LGLYPGYVRKHHVTLLPKQRKNP*SPYRLD
Trigger: ATCTAATCTGTATGGACTCCAGGGATTCTTCCTTTG...TTTTGGAAGCAATGTAACATGATGTTTACGCACATAACCTGGGTATAGGCCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422368.5
CDS-3UTR CCA 90 bp TTGGGCCTATACCCAGGTTATGTGCGTAAACATCATGTTACATTGCTTCCAAAATTTTGGTCCACTAGATaGAATTGCTCTGCAGAAAGA +
Preference number: 4 (lower is better)
Translates to: LGLYPGYVRKHHVTLLPKFWSTR*NCSAER
Trigger: TCTTTCTGCAGAGCAATTCCATCTAGTGGACCAAAA...TTTTGGAAGCAATGTAACATGATGTTTACGCACATAACCTGGGTATAGGCCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422368.5
CDS-3UTR CCA 90 bp TCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTAAGACATCAGAAGTCTCATCATTTGTGCATTaGATTCCCCCAATGACTGAA +
Preference number: 4 (lower is better)
Translates to: SQCHALTIFTFLSKTSEVSSFVH*IPPMTE
Trigger: TTCAGTCATTGGGGGAATCCAATGCACAAATGATGA...GACTTCTGATGTCTTAGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402905.7
ENST00000438828.4
CDS-3UTR CCA 90 bp TTGTCTGCTAGAGTATCCACTCTTACAGTTGGTAAGTTTCTGTTACTGGGTTTCTCATCATTTGTGCATTaGATTCCCCCAATGACTGAA +
Preference number: 4 (lower is better)
Translates to: LSARVSTLTVGKFLLLGFSSFVH*IPPMTE
Trigger: TTCAGTCATTGGGGGAATCCAATGCACAAATGATGA...GAAACCCAGTAACAGAAACTTACCAACTGTAAGAGTGGATACTCTAGCAGACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427712.5
CDS-3UTR CCA 90 bp AGATTCTTTGGGGCTCTAACTAGTCTAAGAGATTTGCTTGAAACTCTACTCCCTTCATCATTTGTGCATTaGATTCCCCCAATGACTGAA +
Preference number: 4 (lower is better)
Translates to: RFFGALTSLRDLLETLLPSSFVH*IPPMTE
Trigger: TTCAGTCATTGGGGGAATCCAATGCACAAATGATGA...AGGGAGTAGAGTTTCAAGCAAATCTCTTAGACTAGTTAGAGCCCCAAAGAATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444724.5
CDS-3UTR TCA 90 bp CTATACCCAGGTTATGTGCGTAAACATCATGTTACATTGCTTCCAAAAGTATCAATCTTATGTGCTACTTaGGGATGTAAACGTGAGGGT +
Preference number: 4 (lower is better)
Translates to: LYPGYVRKHHVTLLPKVSILCAT*GCKREG
Trigger: ACCCTCACGTTTACATCCTCAAGTAGCACATAAGAT...TGATACTTTTGGAAGCAATGTAACATGATGTTTACGCACATAACCTGGGTATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422368.5
CDS-3UTR TCA 90 bp CAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTAAGACATCAATCTTATGTGCTACTTaGGGATGTAAACGTGAGGGT +
Preference number: 4 (lower is better)
Translates to: QLSQCHALTIFTFLSKTSILCAT*GCKREG
Trigger: ACCCTCACGTTTACATCCTCAAGTAGCACATAAGAT...TGATGTCTTAGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR TCA 90 bp TCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTTGCTGGAATAATCTCTaGGTTATATACCGTATCTCC +
Preference number: 4 (lower is better)
Translates to: SSVQLSQCHALTIFTFLSCWNNL*VIYRIS
Trigger: GGAGATACGGTATATAACTCAGAGATTATTCCAGCA...AGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR TCA 90 bp GTTCAGACTATATTACTGTGGATAAATTCAGAACAGCTTTTGAAATACTGGCCTCTGTCTGTAGTCCATTaGAGCGTTGCTGGAATAATC +
Preference number: 4 (lower is better)
Translates to: VQTILLWINSEQLLKYWPLSVVH*SVAGII
Trigger: GATTATTCCAGCAACGCTTCAATGGACTACAGACAG...AGGCCAGTATTTCAAAAGCTGTTCTGAATTTATCCACAGTAATATAGTCTGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR TCA 90 bp TCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTAAGACATCAGAAGTCTTCTTCAATAAGAGCTaGGTGGTTGTCTATAATCTG +
Preference number: 4 (lower is better)
Translates to: SQCHALTIFTFLSKTSEVFFNKS*VVVYNL
Trigger: CAGATTATAGACAACCACTCAGCTCTTATTGAAGAA...GACTTCTGATGTCTTAGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR TCA 90 bp TCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCATTGGATTCCCCCAATaGCTGAAGTTCATATTGAAT +
Preference number: 4 (lower is better)
Translates to: SNWSSVQLSQCHALTIFTIGFPQ*LKFILN
Trigger: ATTCAATATGAACTTCAGTCATTGGGGGAATCCAAT...GGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402905.7
ENST00000438828.4
CDS-3UTR TCA 90 bp GTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTCAGCATCTTCAAGATaGACAAAATTGCCACTATCT +
Preference number: 4 (lower is better)
Translates to: VFSPIISMPRFDYIHLPFSASSR*TKLPLS
Trigger: AGATAGTGGCAATTTTGTTCATCTTGAAGATGCTGA...GAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402905.7
ENST00000438828.4
CDS-3UTR TCA 90 bp TGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCAGCATCTTCAAGATaGACAAAATTGCCACTATCT +
Preference number: 4 (lower is better)
Translates to: WSSVQLSQCHALTIFTFLSASSR*TKLPLS
Trigger: AGATAGTGGCAATTTTGTTCATCTTGAAGATGCTGA...AAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402905.7
ENST00000438828.4
CDS-3UTR TCA 90 bp AGATTCTTTGGGGCTCTAACTAGTCTAAGAGATTTGCTTGAAACTCTACTCCCTTCTAAGAGATTTGCTTaGAACTCTACTCCCTTAGTA +
Preference number: 4 (lower is better)
Translates to: RFFGALTSLRDLLETLLPSKRFA*NSTPLV
Trigger: TACTAAGGGAGTAGAGTTTCAAGCAAATCTCTTAGA...AGGGAGTAGAGTTTCAAGCAAATCTCTTAGACTAGTTAGAGCCCCAAAGAATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434998.5
ENST00000444724.5
CDS-3UTR TCA 90 bp TCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCCACAAAGAGGTACTATaGAACTTTGAGAGTGATGAA +
Preference number: 4 (lower is better)
Translates to: SNWSSVQLSQCHALTIFTHKEVL*NFESDE
Trigger: TTCATCACTCTCAAAGTTTCATAGTACCTCTTTGTG...GGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438828.4
CDS-3UTR GCA 90 bp TCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTAAGACATCAGAAGTCGATGAAGAATGTAATTaGTGGTATTGTCTGCTAGAG +
Preference number: 4 (lower is better)
Translates to: SQCHALTIFTFLSKTSEVDEECN*WYCLLE
Trigger: CTCTAGCAGACAATACCAGCAATTACATTCTTCATC...GACTTCTGATGTCTTAGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR GCA 90 bp TTGGGCCTATACCCAGGTTATGTGCGTAAACATCATGTTACATTGCTTCCAAAAATTCTCATCTCTAACTaGAGTTTCCTCTTCTTCAAG +
Preference number: 4 (lower is better)
Translates to: LGLYPGYVRKHHVTLLPKILISN*SFLFFK
Trigger: CTTGAAGAAGAGGAAACTGCAGTTAGAGATGAGAAT...TTTTGGAAGCAATGTAACATGATGTTTACGCACATAACCTGGGTATAGGCCCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422368.5
CDS-3UTR GCA 90 bp AGAAGAACCAATGCAGTATCCCTTCTGGAGAGATTAAGATTTTCAAGGTCCTCAATTCTCATCTCTAACTaGAGTTTCCTCTTCTTCAAG +
Preference number: 4 (lower is better)
Translates to: RRTNAVSLLERLRFSRSSILISN*SFLFFK
Trigger: CTTGAAGAAGAGGAAACTGCAGTTAGAGATGAGAAT...TGAGGACCTTGAAAATCTTAATCTCTCCAGAAGGGATACTGCATTGGTTCTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438828.4
CDS-3UTR GCA 90 bp TTCTCATCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATACCTTGGTTGTAACTaGAAACCCTGTAGTTGTGTA +
Preference number: 4 (lower is better)
Translates to: FSSNWSSVQLSQCHALTIYLGCN*KPCSCV
Trigger: TACACAACTACAGGGTTTGCAGTTACAACCAAGGTA...TATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGATGAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR GCA 90 bp TCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTTGTATTGGAATAGTCTaGACATCTCCCAACAGAATC +
Preference number: 4 (lower is better)
Translates to: SSVQLSQCHALTIFTFLSCIGIV*TSPNRI
Trigger: GATTCTGTTGGGAGATGTGCAGACTATTCCAATACA...AGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR GCA 90 bp CTCATCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTTGTATTGGAATAGTCTaGACATCTCCCAACAGAATC +
Preference number: 4 (lower is better)
Translates to: LIKLVFSPIISMPRFDYICIGIV*TSPNRI
Trigger: GATTCTGTTGGGAGATGTGCAGACTATTCCAATACA...AATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGATGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR GCA 90 bp GTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTAAGACATTCCACAGATGTAGCTaGTGGACTTTGTGTTATGAT +
Preference number: 4 (lower is better)
Translates to: VQLSQCHALTIFTFLSKTFHRCS*WTLCYD
Trigger: ATCATAACACAAAGTCCAGCAGCTACATCTGTGGAA...TGTCTTAGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000438828.4
CDS-3UTR GCA 90 bp CTCATCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTTTCCACAGATGTAGCTaGTGGACTTTGTGTTATGAT +
Preference number: 4 (lower is better)
Translates to: LIKLVFSPIISMPRFDYIFHRCS*WTLCYD
Trigger: ATCATAACACAAAGTCCAGCAGCTACATCTGTGGAA...AATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGATGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000438828.4
CDS-3UTR GCA 90 bp CTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTAAATTTGGCAACCTaGCTGTATAAAATGCCAACA +
Preference number: 4 (lower is better)
Translates to: LVFSPIISMPRFDYIHLPLNLAT*LYKMPT
Trigger: TGTTGGCATTTTATACAGGCAGGTTGCCAAATTTAA...AGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000438828.4
CDS-3UTR GCA 90 bp CTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTAAACATGTCAAACTTTaGTGTAGAGCTGTTAGAGAA +
Preference number: 4 (lower is better)
Translates to: LVFSPIISMPRFDYIHLPKHVKL*CRAVRE
Trigger: TTCTCTAACAGCTCTACAGCAAAGTTTGACATGTTT...AGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000438828.4
CDS-3UTR CCA 90 bp TGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTGTGAAAGCTTTAATTaGGTCTTCACAGCAGCATTT +
Preference number: 4 (lower is better)
Translates to: WSSVQLSQCHALTIFTFLCESFN*VFTAAF
Trigger: AAATGCTGCTGTGAAGACCCAATTAAAGCTTTCACA...AAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp TTGGGCCTATACCCAGGTTATGTGCGTAAACATCATGTTACATTGCTTCCAAAATGTGAAAGCTTTAATTaGGTCTTCACAGCAGCATTT +
Preference number: 4 (lower is better)
Translates to: LGLYPGYVRKHHVTLLPKCESFN*VFTAAF
Trigger: AAATGCTGCTGTGAAGACCCAATTAAAGCTTTCACA...TTTTGGAAGCAATGTAACATGATGTTTACGCACATAACCTGGGTATAGGCCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422368.5
CDS-3UTR CCA 90 bp TCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTCAAATACTTGAGCACTaGTTTTTGACTCTTCACCGT +
Preference number: 4 (lower is better)
Translates to: SSVQLSQCHALTIFTFLSQILEH*FLTLHR
Trigger: ACGGTGAAGAGTCAAAAACCAGTGCTCAAGTATTTG...AGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp TCATCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCCAAATACTTGAGCACTaGTTTTTGACTCTTCACCGT +
Preference number: 4 (lower is better)
Translates to: SSNWSSVQLSQCHALTIFQILEH*FLTLHR
Trigger: ACGGTGAAGAGTCAAAAACCAGTGCTCAAGTATTTG...GAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp CTCATCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTGTAAGTTTCTGTTACTaGGTTTCTCTTCAGGGACAT +
Preference number: 4 (lower is better)
Translates to: LIKLVFSPIISMPRFDYIVSFCY*VSLQGH
Trigger: ATGTCCCTGAAGAGAAACCCAGTAACAGAAACTTAC...AATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGATGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp AGGAAACTTCTGTACCTTTTTAATGTAAATCCGAGCTGGACAAGTGGCTTTGTAGTAAGTTTCTGTTACTaGGTTTCTCTTCAGGGACAT +
Preference number: 4 (lower is better)
Translates to: RKLLYLFNVNPSWTSGFVVSFCY*VSLQGH
Trigger: ATGTCCCTGAAGAGAAACCCAGTAACAGAAACTTAC...TACAAAGCCACTTGTCCAGCTCGGATTTACATTAAAAAGGTACAGAAGTTTCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457031.5
CDS-3UTR CCA 90 bp CTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTGAAGAATGTAATTGCTaGTATTGTCTGCTAGAGTAT +
Preference number: 4 (lower is better)
Translates to: LVFSPIISMPRFDYIHLPEECNC*YCLLEY
Trigger: ATACTCTAGCAGACAATACCAGCAATTACATTCTTC...AGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp CTGTACCTTTTTAATGTAAATCCGAGCTGGACAAGTGGCTTTGTAGAGCTGACAGAAGAATGTAATTGCTaGTATTGTCTGCTAGAGTAT +
Preference number: 4 (lower is better)
Translates to: LYLFNVNPSWTSGFVELTEECNC*YCLLEY
Trigger: ATACTCTAGCAGACAATACCAGCAATTACATTCTTC...TGTCAGCTCTACAAAGCCACTTGTCCAGCTCGGATTTACATTAAAAAGGTACAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457031.5
CDS-3UTR CCA 90 bp AAACTCTACTCCCTTAGTAAACAACTAACCCAGTGTCTGAGAATACTGTATATACGGTCACTGACTTTTTaGGCAATGGGAAGGATGTTT +
Preference number: 4 (lower is better)
Translates to: KLYSLSKQLTQCLRILYIRSLTF*AMGRMF
Trigger: AAACATCCTTCCCATTGCCCAAAAAGTCAGTGACCG...TATATACAGTATTCTCAGACACTGGGTTAGTTGTTTACTAAGGGAGTAGAGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434998.5
ENST00000444724.5
CDS-3UTR CCA 90 bp GTTCAGACTATATTACTGTGGATAAATTCAGAACAGCTTTTGAAATACTGGCCTTGTATTAGAAGAAAGTaGCTGAAGAGGCCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: VQTILLWINSEQLLKYWPCIRRK*LKRPQK
Trigger: CTTCTGGGGCCTCTTCAGCCACTTTCTTCTAATACA...AGGCCAGTATTTCAAAAGCTGTTCTGAATTTATCCACAGTAATATAGTCTGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp AAACTCTACTCCCTTAGTAAACAACTAACCCAGTGTCTGAGAATACTGTATATATGTATTAGAAGAAAGTaGCTGAAGAGGCCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: KLYSLSKQLTQCLRILYICIRRK*LKRPQK
Trigger: CTTCTGGGGCCTCTTCAGCCACTTTCTTCTAATACA...TATATACAGTATTCTCAGACACTGGGTTAGTTGTTTACTAAGGGAGTAGAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434998.5
ENST00000444724.5
CDS-3UTR CCA 90 bp TCTTGTAAAGATGAAATGGGCATAATTCACAACCAGCAATTCTACTTTAAGGCATGTATTAGAAGAAAGTaGCTGAAGAGGCCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: SCKDEMGIIHNQQFYFKACIRRK*LKRPQK
Trigger: CTTCTGGGGCCTCTTCAGCCACTTTCTTCTAATACA...TGCCTTAAAGTAGAATTGCTGGTTGTGAATTATGCCCATTTCATCTTTACAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444724.5
CDS-3UTR CCA 90 bp GTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTAAGACATCATATGGAACATACTaGGATTTCCACATCAAGCGT +
Preference number: 4 (lower is better)
Translates to: VQLSQCHALTIFTFLSKTSYGTY*DFHIKR
Trigger: ACGCTTGATGTGGAAATCCCAGTATGTTCCATATGA...TGTCTTAGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp CTCATCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTTCATATGGAACATACTaGGATTTCCACATCAAGCGT +
Preference number: 4 (lower is better)
Translates to: LIKLVFSPIISMPRFDYISYGTY*DFHIKR
Trigger: ACGCTTGATGTGGAAATCCCAGTATGTTCCATATGA...AATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGATGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp ACAAATTTTCTAGTAAATAAGAGAGCTTGGGCCTATACCCAGGTTATGTGCGTATGGGATTCCATCATATaGAACATACTGGGATTTCCA +
Preference number: 4 (lower is better)
Translates to: TNFLVNKRAWAYTQVMCVWDSII*NILGFP
Trigger: TGGAAATCCCAGTATGTTCCATATGATGGAATCCCA...TACGCACATAACCTGGGTATAGGCCCAAGCTCTCTTATTTACTAGAAAATTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422368.5
CDS-3UTR CCA 90 bp TCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTCCCTGCATTAACAAATaGGATTCCATCATATGGAAC +
Preference number: 4 (lower is better)
Translates to: SSVQLSQCHALTIFTFLSPCINK*DSIIWN
Trigger: GTTCCATATGATGGAATCCCATTTGTTAATGCAGGG...AGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp CTCATCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCCCTGCATTAACAAATaGGATTCCATCATATGGAAC +
Preference number: 4 (lower is better)
Translates to: LIKLVFSPIISMPRFDYIPCINK*DSIIWN
Trigger: GTTCCATATGATGGAATCCCATTTGTTAATGCAGGG...AATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGATGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp CAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTAAGACATCAGAGACAAAGAACCCCTaGTCTGATTTGTTTCCACTT +
Preference number: 4 (lower is better)
Translates to: QLSQCHALTIFTFLSKTSETKNP*SDLFPL
Trigger: AAGTGGAAACAAATCAGACCAGGGGTTCTTTGTCTC...TGATGTCTTAGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp TCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCGTCTATAATCTGTATTaGAATAGTCTGCACATCTCC +
Preference number: 4 (lower is better)
Translates to: SNWSSVQLSQCHALTIFTVYNLY*NSLHIS
Trigger: GGAGATGTGCAGACTATTCCAATACAGATTATAGAC...GGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp TCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTAAGACATCAGAAGTCGGTTCTTGTTTAACTTaGCTCACAGAAATGGTACTT +
Preference number: 4 (lower is better)
Translates to: SQCHALTIFTFLSKTSEVGSCLT*LTEMVL
Trigger: AAGTACCATTTCTGTGAGCCAAGTTAAACAAGAACC...GACTTCTGATGTCTTAGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp GTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTTCCATAGACAATGCTaGTTCTTTGGGTTCTTGTTT +
Preference number: 4 (lower is better)
Translates to: VFSPIISMPRFDYIHLPFFHRQC*FFGFLF
Trigger: AAACAAGAACCCAAAGAACCAGCATTGTCTATGGAA...GAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp AGAAGAACCAATGCAGTATCCCTTCTGGAGAGATTAAGATTTTCAAGGTCCTCATTCCATAGACAATGCTaGTTCTTTGGGTTCTTGTTT +
Preference number: 4 (lower is better)
Translates to: RRTNAVSLLERLRFSRSSFHRQC*FFGFLF
Trigger: AAACAAGAACCCAAAGAACCAGCATTGTCTATGGAA...TGAGGACCTTGAAAATCTTAATCTCTCCAGAAGGGATACTGCATTGGTTCTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438828.4
CDS-3UTR CCA 90 bp TCATCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCCACAGATGTAGCTGCTaGACTTTGTGTTATGATGTA +
Preference number: 4 (lower is better)
Translates to: SSNWSSVQLSQCHALTIFHRCSC*TLCYDV
Trigger: TACATCATAACACAAAGTCCAGCAGCTACATCTGTG...GAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000438828.4
CDS-3UTR CCA 90 bp GTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTAAGACACACAGATGTAGCTGCTaGACTTTGTGTTATGATGTA +
Preference number: 4 (lower is better)
Translates to: VQLSQCHALTIFTFLSKTHRCSC*TLCYDV
Trigger: TACATCATAACACAAAGTCCAGCAGCTACATCTGTG...TGTCTTAGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000438828.4
CDS-3UTR CCA 90 bp CTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTATTGGTTTGTTTGTaGGAAAGTTGCTCTGTAACT +
Preference number: 4 (lower is better)
Translates to: LVFSPIISMPRFDYIHLPLLVCL*ESCSVT
Trigger: AGTTACAGAGCAACTTTCCCACAAACAAACCAATAA...AGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000438828.4
CDS-3UTR CCA 90 bp CCTGAAACCAAGTCAATTAAGAATGGGAGGCTGGACTTAGAAAAGCCAAAAGTGTTATTGGTTTGTTTGTaGGAAAGTTGCTCTGTAACT +
Preference number: 4 (lower is better)
Translates to: PETKSIKNGRLDLEKPKVLLVCL*ESCSVT
Trigger: AGTTACAGAGCAACTTTCCCACAAACAAACCAATAA...CACTTTTGGCTTTTCTAAGTCCAGCCTCCCATTCTTAATTGACTTGGTTTCAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000438828.4
CDS-3UTR CCA 90 bp TTCTCATCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATACAAAGGAAGAATCCCTaGAGTCCATACAGATTAGAT +
Preference number: 4 (lower is better)
Translates to: FSSNWSSVQLSQCHALTIQRKNP*SPYRLD
Trigger: ATCTAATCTGTATGGACTCCAGGGATTCTTCCTTTG...TATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGATGAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402905.7
ENST00000438828.4
CDS-3UTR CCA 90 bp CTCATCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTTTTTGGTCCACTAGATaGAATTGCTCTGCAGAAAGA +
Preference number: 4 (lower is better)
Translates to: LIKLVFSPIISMPRFDYIFWSTR*NCSAER
Trigger: TCTTTCTGCAGAGCAATTCCATCTAGTGGACCAAAA...AATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGATGAG
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000402905.7
ENST00000438828.4
CDS-3UTR CCA 90 bp TCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTTTTTGGTCCACTAGATaGAATTGCTCTGCAGAAAGA +
Preference number: 4 (lower is better)
Translates to: SSVQLSQCHALTIFTFLSFWSTR*NCSAER
Trigger: TCTTTCTGCAGAGCAATTCCATCTAGTGGACCAAAA...AGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402905.7
ENST00000438828.4
CDS-3UTR CCA 90 bp TCTTGTAAAGATGAAATGGGCATAATTCACAACCAGCAATTCTACTTTAAGGCAATAGCCTGCCCATTTTaGTCCACTAGATGGAATTGC +
Preference number: 4 (lower is better)
Translates to: SCKDEMGIIHNQQFYFKAIACPF*STRWNC
Trigger: GCAATTCCATCTAGTGGACCAAAATGGGCAGGCTAT...TGCCTTAAAGTAGAATTGCTGGTTGTGAATTATGCCCATTTCATCTTTACAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444724.5
CDS-3UTR CCA 90 bp TCATCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCTCATCATTTGTGCATTaGATTCCCCCAATGACTGAA +
Preference number: 4 (lower is better)
Translates to: SSNWSSVQLSQCHALTIFSSFVH*IPPMTE
Trigger: TTCAGTCATTGGGGGAATCCAATGCACAAATGATGA...GAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402905.7
ENST00000438828.4
CDS-3UTR CCA 90 bp ACCCAGGTTATGTGCGTAAACATCATGTTACATTGCTTCCAAAAGTATCAATTACTGTCCATTTTCTGTTaGGCTGGCAACGATCATCAT +
Preference number: 4 (lower is better)
Translates to: TQVMCVNIMLHCFQKYQLLSIFC*AGNDHH
Trigger: ATGATGATCGTTGCCAGCCCAACAGAAAATGGACAG...TAATTGATACTTTTGGAAGCAATGTAACATGATGTTTACGCACATAACCTGGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422368.5
CDS-3UTR CCA 90 bp AAACTCTACTCCCTTAGTAAACAACTAACCCAGTGTCTGAGAATACTGTATATACTGTCCATTTTCTGTTaGGCTGGCAACGATCATCAT +
Preference number: 4 (lower is better)
Translates to: KLYSLSKQLTQCLRILYILSIFC*AGNDHH
Trigger: ATGATGATCGTTGCCAGCCCAACAGAAAATGGACAG...TATATACAGTATTCTCAGACACTGGGTTAGTTGTTTACTAAGGGAGTAGAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444724.5
CDS-3UTR CCA 90 bp AGATTCTTTGGGGCTCTAACTAGTCTAAGAGATTTGCTTGAAACTCTACTCCCTACCTGCATTAACAAATaGGATTCCATCATATGGAAC +
Preference number: 4 (lower is better)
Translates to: RFFGALTSLRDLLETLLPTCINK*DSIIWN
Trigger: GTTCCATATGATGGAATCCCATTTGTTAATGCAGGT...AGGGAGTAGAGTTTCAAGCAAATCTCTTAGACTAGTTAGAGCCCCAAAGAATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434998.5
ENST00000444724.5
3UTR CAA 72 bp AACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTaGACTATATTCACCTTCCTTTCTAAGACATCAGAA +
Preference number: 4 (lower is better)
Translates to: NWSSVQLSQCHA*TIFTFLSKTSE
Trigger: TTCTGATGTCTTAGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR TCA 90 bp CTCATCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTATCATCTCAAATACTTaGGCACTGGTTTTTGACTCT +
Preference number: 4 (lower is better)
Translates to: LIKLVFSPIISMPRFDYIIISNT*ALVFDS
Trigger: AGAGTCAAAAACCAGTGCTCAAGTATTTGAGATGAT...AATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGATGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320443.12
ENST00000428585.5
CDS-3UTR TCA 90 bp GTTCAGACTATATTACTGTGGATAAATTCAGAACAGCTTTTGAAATACTGGCCTACAGTAGCCACGGTATaGATCTCCAATTTTCTCACA +
Preference number: 4 (lower is better)
Translates to: VQTILLWINSEQLLKYWPTVATV*ISNFLT
Trigger: TGTGAGAAAATTGGAGATTCATACCGTGGCTACTGT...AGGCCAGTATTTCAAAAGCTGTTCTGAATTTATCCACAGTAATATAGTCTGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR TCA 90 bp CAACTAACCCAGTGTCTGAGAATACTGTATATAACATACCTAATGCTTGAGAACTGTGTTTGCTGCTTGTaGAATGTTAGGACACTTTCT +
Preference number: 4 (lower is better)
Translates to: QLTQCLRILYITYLMLENCVCCL*NVRTLS
Trigger: AGAAAGTGTCCTAACATTTCACAAGCAGCAAACACA...GTTCTCAAGCATTAGGTATGTTATATACAGTATTCTCAGACACTGGGTTAGTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434998.5
ENST00000444724.5
CDS-3UTR TCA 90 bp TCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTTTCTTCAATAAGAGCTaGGTGGTTGTCTATAATCTG +
Preference number: 4 (lower is better)
Translates to: SSVQLSQCHALTIFTFLSFFNKS*VVVYNL
Trigger: CAGATTATAGACAACCACTCAGCTCTTATTGAAGAA...AGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR TCA 90 bp CTCATCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTTTCTTCAATAAGAGCTaGGTGGTTGTCTATAATCTG +
Preference number: 4 (lower is better)
Translates to: LIKLVFSPIISMPRFDYIFFNKS*VVVYNL
Trigger: CAGATTATAGACAACCACTCAGCTCTTATTGAAGAA...AATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGATGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR TCA 90 bp CAACTAACCCAGTGTCTGAGAATACTGTATATAACATACCTAATGCTTGAGAACAGATGCTCAAATACTTaGGCACTGGTTTTTGACTCT +
Preference number: 4 (lower is better)
Translates to: QLTQCLRILYITYLMLENRCSNT*ALVFDS
Trigger: AGAGTCAAAAACCAGTGCTCAAGTATTTGAGCATCT...GTTCTCAAGCATTAGGTATGTTATATACAGTATTCTCAGACACTGGGTTAGTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444724.5
CDS-3UTR TCA 90 bp TCATCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCATTGGATTCCCCCAATaGCTGAAGTTCATATTGAAT +
Preference number: 4 (lower is better)
Translates to: SSNWSSVQLSQCHALTIFIGFPQ*LKFILN
Trigger: ATTCAATATGAACTTCAGTCATTGGGGGAATCCAAT...GAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGATGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402905.7
ENST00000438828.4
CDS-3UTR GCA 90 bp ACAAATTTTCTAGTAAATAAGAGAGCTTGGGCCTATACCCAGGTTATGTGCGTAGATGAAGAATGTAATTaGTGGTATTGTCTGCTAGAG +
Preference number: 4 (lower is better)
Translates to: TNFLVNKRAWAYTQVMCVDEECN*WYCLLE
Trigger: CTCTAGCAGACAATACCAGCAATTACATTCTTCATC...TACGCACATAACCTGGGTATAGGCCCAAGCTCTCTTATTTACTAGAAAATTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422368.5
CDS-3UTR GCA 90 bp TTCTCATCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATAATTCTCATCTCTAACTaGAGTTTCCTCTTCTTCAAG +
Preference number: 4 (lower is better)
Translates to: FSSNWSSVQLSQCHALTIILISN*SFLFFK
Trigger: CTTGAAGAAGAGGAAACTGCAGTTAGAGATGAGAAT...TATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGATGAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR GCA 90 bp TCATCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCATTCTCATCTCTAACTaGAGTTTCCTCTTCTTCAAG +
Preference number: 4 (lower is better)
Translates to: SSNWSSVQLSQCHALTIFILISN*SFLFFK
Trigger: CTTGAAGAAGAGGAAACTGCAGTTAGAGATGAGAAT...GAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGATGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR GCA 90 bp CAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTAAGACATCATGTATTGGAATAGTCTaGACATCTCCCAACAGAATC +
Preference number: 4 (lower is better)
Translates to: QLSQCHALTIFTFLSKTSCIGIV*TSPNRI
Trigger: GATTCTGTTGGGAGATGTGCAGACTATTCCAATACA...TGATGTCTTAGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR GCA 90 bp GTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTAAGACAGTCCAATTATCTCAATaGCACGCTTTGACTATATTC +
Preference number: 4 (lower is better)
Translates to: VQLSQCHALTIFTFLSKTVQLSQ*HALTIF
Trigger: GAATATAGTCAAAGCGTGGCATTGAGATAATTGGAC...TGTCTTAGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR GCA 90 bp CAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTAAGACATCATTCCACAGATGTAGCTaGTGGACTTTGTGTTATGAT +
Preference number: 4 (lower is better)
Translates to: QLSQCHALTIFTFLSKTSFHRCS*WTLCYD
Trigger: ATCATAACACAAAGTCCAGCAGCTACATCTGTGGAA...TGATGTCTTAGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000438828.4
CDS-3UTR GCA 90 bp GTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTTAAATTTGGCAACCTaGCTGTATAAAATGCCAACA +
Preference number: 4 (lower is better)
Translates to: VFSPIISMPRFDYIHLPFLNLAT*LYKMPT
Trigger: TGTTGGCATTTTATACAGGCAGGTTGCCAAATTTAA...GAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000438828.4
CDS-3UTR GCA 90 bp TCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTAAGACATCAGAAGTCAAACATGTCAAACTTTaGTGTAGAGCTGTTAGAGAA +
Preference number: 4 (lower is better)
Translates to: SQCHALTIFTFLSKTSEVKHVKL*CRAVRE
Trigger: TTCTCTAACAGCTCTACAGCAAAGTTTGACATGTTT...GACTTCTGATGTCTTAGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000438828.4
CDS-3UTR GCA 90 bp TATACCCAGGTTATGTGCGTAAACATCATGTTACATTGCTTCCAAAAGTATCAATCCACTAGATGGAATTaGTCTGCAGAAAGAGTCTGT +
Preference number: 4 (lower is better)
Translates to: YTQVMCVNIMLHCFQKYQSTRWN*SAERVC
Trigger: ACAGACTCTTTCTGCAGAGCAATTCCATCTAGTGGA...TTGATACTTTTGGAAGCAATGTAACATGATGTTTACGCACATAACCTGGGTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422368.5
CDS-3UTR GCA 90 bp AAACTCTACTCCCTTAGTAAACAACTAACCCAGTGTCTGAGAATACTGTATATATCCACTAGATGGAATTaGTCTGCAGAAAGAGTCTGT +
Preference number: 4 (lower is better)
Translates to: KLYSLSKQLTQCLRILYISTRWN*SAERVC
Trigger: ACAGACTCTTTCTGCAGAGCAATTCCATCTAGTGGA...TATATACAGTATTCTCAGACACTGGGTTAGTTGTTTACTAAGGGAGTAGAGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444724.5
CDS-3UTR CCA 90 bp CTCATCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTTGTGAAAGCTTTAATTaGGTCTTCACAGCAGCATTT +
Preference number: 4 (lower is better)
Translates to: LIKLVFSPIISMPRFDYICESFN*VFTAAF
Trigger: AAATGCTGCTGTGAAGACCCAATTAAAGCTTTCACA...AATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGATGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp GTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTAAGACATGTGAAAGCTTTAATTaGGTCTTCACAGCAGCATTT +
Preference number: 4 (lower is better)
Translates to: VQLSQCHALTIFTFLSKTCESFN*VFTAAF
Trigger: AAATGCTGCTGTGAAGACCCAATTAAAGCTTTCACA...TGTCTTAGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp CAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTAAGACATCACAAATACTTGAGCACTaGTTTTTGACTCTTCACCGT +
Preference number: 4 (lower is better)
Translates to: QLSQCHALTIFTFLSKTSQILEH*FLTLHR
Trigger: ACGGTGAAGAGTCAAAAACCAGTGCTCAAGTATTTG...TGATGTCTTAGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp CAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTAAGACATCACATTTTCTGTTGGGCTaGCAACGATCATCTCAAATA +
Preference number: 4 (lower is better)
Translates to: QLSQCHALTIFTFLSKTSHFLLG*QRSSQI
Trigger: TATTTGAGATGATCGTTGCCAGCCCAACAGAAAATG...TGATGTCTTAGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320443.12
ENST00000428585.5
CDS-3UTR CCA 90 bp TCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCGAAGAATGTAATTGCTaGTATTGTCTGCTAGAGTAT +
Preference number: 4 (lower is better)
Translates to: SNWSSVQLSQCHALTIFTEECNC*YCLLEY
Trigger: ATACTCTAGCAGACAATACCAGCAATTACATTCTTC...GGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp AGATTCTTTGGGGCTCTAACTAGTCTAAGAGATTTGCTTGAAACTCTACTCCCTGAAGAATGTAATTGCTaGTATTGTCTGCTAGAGTAT +
Preference number: 4 (lower is better)
Translates to: RFFGALTSLRDLLETLLPEECNC*YCLLEY
Trigger: ATACTCTAGCAGACAATACCAGCAATTACATTCTTC...AGGGAGTAGAGTTTCAAGCAAATCTCTTAGACTAGTTAGAGCCCCAAAGAATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434998.5
ENST00000444724.5
CDS-3UTR CCA 90 bp CTATACCCAGGTTATGTGCGTAAACATCATGTTACATTGCTTCCAAAAGTATCATCATATGGAACATACTaGGATTTCCACATCAAGCGT +
Preference number: 4 (lower is better)
Translates to: LYPGYVRKHHVTLLPKVSSYGTY*DFHIKR
Trigger: ACGCTTGATGTGGAAATCCCAGTATGTTCCATATGA...TGATACTTTTGGAAGCAATGTAACATGATGTTTACGCACATAACCTGGGTATAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422368.5
CDS-3UTR CCA 90 bp CTATACCCAGGTTATGTGCGTAAACATCATGTTACATTGCTTCCAAAAGTATCACCCTGCATTAACAAATaGGATTCCATCATATGGAAC +
Preference number: 4 (lower is better)
Translates to: LYPGYVRKHHVTLLPKVSPCINK*DSIIWN
Trigger: GTTCCATATGATGGAATCCCATTTGTTAATGCAGGG...TGATACTTTTGGAAGCAATGTAACATGATGTTTACGCACATAACCTGGGTATAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422368.5
CDS-3UTR CCA 90 bp GTTCAGACTATATTACTGTGGATAAATTCAGAACAGCTTTTGAAATACTGGCCTGAGACAAAGAACCCCTaGTCTGATTTGTTTCCACTT +
Preference number: 4 (lower is better)
Translates to: VQTILLWINSEQLLKYWPETKNP*SDLFPL
Trigger: AAGTGGAAACAAATCAGACCAGGGGTTCTTTGTCTC...AGGCCAGTATTTCAAAAGCTGTTCTGAATTTATCCACAGTAATATAGTCTGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp TCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTAAGACATCAGAAGTCGCAGTACTATTGTTTTaGGTTAAGCATGTATCTCTT +
Preference number: 4 (lower is better)
Translates to: SQCHALTIFTFLSKTSEVAVLLF*VKHVSL
Trigger: AAGAGATACATGCTTAACCCAAAACAATAGTACTGC...GACTTCTGATGTCTTAGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp TCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCGCAGTACTATTGTTTTaGGTTAAGCATGTATCTCTT +
Preference number: 4 (lower is better)
Translates to: SNWSSVQLSQCHALTIFTAVLLF*VKHVSL
Trigger: AAGAGATACATGCTTAACCCAAAACAATAGTACTGC...GGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp TCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTGTCTATAATCTGTATTaGAATAGTCTGCACATCTCC +
Preference number: 4 (lower is better)
Translates to: SSVQLSQCHALTIFTFLSVYNLY*NSLHIS
Trigger: GGAGATGTGCAGACTATTCCAATACAGATTATAGAC...AGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp CTCATCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTGTCTATAATCTGTATTaGAATAGTCTGCACATCTCC +
Preference number: 4 (lower is better)
Translates to: LIKLVFSPIISMPRFDYIVYNLY*NSLHIS
Trigger: GGAGATGTGCAGACTATTCCAATACAGATTATAGAC...AATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGATGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp TCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTGGTTCTTGTTTAACTTaGCTCACAGAAATGGTACTT +
Preference number: 4 (lower is better)
Translates to: SSVQLSQCHALTIFTFLSGSCLT*LTEMVL
Trigger: AAGTACCATTTCTGTGAGCCAAGTTAAACAAGAACC...AGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp TCATCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCGGTTCTTGTTTAACTTaGCTCACAGAAATGGTACTT +
Preference number: 4 (lower is better)
Translates to: SSNWSSVQLSQCHALTIFGSCLT*LTEMVL
Trigger: AAGTACCATTTCTGTGAGCCAAGTTAAACAAGAACC...GAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGATGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp CTCATCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTAGCTTCTCATCAAACTaGTCTTCAGTCCAATTATCT +
Preference number: 4 (lower is better)
Translates to: LIKLVFSPIISMPRFDYISFSSN*SSVQLS
Trigger: AGATAATTGGACTGAAGACCAGTTTGATGAGAAGCT...AATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGATGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp TCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTAGCTTCTCATCAAACTaGTCTTCAGTCCAATTATCT +
Preference number: 4 (lower is better)
Translates to: SSVQLSQCHALTIFTFLSSFSSN*SSVQLS
Trigger: AGATAATTGGACTGAAGACCAGTTTGATGAGAAGCT...AGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp TCATCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCAGCTTCTCATCAAACTaGTCTTCAGTCCAATTATCT +
Preference number: 4 (lower is better)
Translates to: SSNWSSVQLSQCHALTIFSFSSN*SSVQLS
Trigger: AGATAATTGGACTGAAGACCAGTTTGATGAGAAGCT...GAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGATGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp TCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTATTGGTTTGTTTGTaGGAAAGTTGCTCTGTAACT +
Preference number: 4 (lower is better)
Translates to: SNWSSVQLSQCHALTIFTLLVCL*ESCSVT
Trigger: AGTTACAGAGCAACTTTCCCACAAACAAACCAATAA...GGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000438828.4
CDS-3UTR CCA 90 bp CAACTAACCCAGTGTCTGAGAATACTGTATATAACATACCTAATGCTTGAGAACTTTTGGTCCACTAGATaGAATTGCTCTGCAGAAAGA +
Preference number: 4 (lower is better)
Translates to: QLTQCLRILYITYLMLENFWSTR*NCSAER
Trigger: TCTTTCTGCAGAGCAATTCCATCTAGTGGACCAAAA...GTTCTCAAGCATTAGGTATGTTATATACAGTATTCTCAGACACTGGGTTAGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444724.5
CDS-3UTR CCA 90 bp TCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTGGGAAAGGTCCACCATaGCTGTATTTATCTATAATT +
Preference number: 4 (lower is better)
Translates to: SSVQLSQCHALTIFTFLSGKGPP*LYLSII
Trigger: AATTATAGATAAATACAGCCATGGTGGACCTTTCCC...AGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402905.7
ENST00000438828.4
3UTR CAA 72 bp CAACTGCACAGTTTCCACAGATGTAGCTGCTGGACTTaGTGTTATGATGTAAAATCTAATACTTCATCTTTC +
Preference number: 4 (lower is better)
Translates to: QLHSFHRCSCWT*CYDVKSNTSSF
Trigger: GAAAGATGAAGTATTAGATTTTACATCATAACACAAAGTCCAGCAGCTACATCTGTGGAAACTGTGCAGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000438828.4
3UTR CAA 72 bp TTCTCCTGCTCCATTCTGATAATTTTCTTGTCAATTTaGGGGTCTGTAGGAACTCTATATTCAGGAAACTTC +
Preference number: 4 (lower is better)
Translates to: FSCSILIIFLSI*GSVGTLYSGNF
Trigger: GAAGTTTCCTGAATATAGAGTTCCTACAGACCCCAAAATTGACAAGAAAATTATCAGAATGGAGCAGGAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457031.5
CDS-3UTR TCA 90 bp TATACCCAGGTTATGTGCGTAAACATCATGTTACATTGCTTCCAAAAGTATCAATGTGTTTGCTGCTTGTaGAATGTTAGGACACTTTCT +
Preference number: 4 (lower is better)
Translates to: YTQVMCVNIMLHCFQKYQCVCCL*NVRTLS
Trigger: AGAAAGTGTCCTAACATTTCACAAGCAGCAAACACA...TTGATACTTTTGGAAGCAATGTAACATGATGTTTACGCACATAACCTGGGTATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422368.5
CDS-3UTR TCA 90 bp AAACTCTACTCCCTTAGTAAACAACTAACCCAGTGTCTGAGAATACTGTATATATGTGTTTGCTGCTTGTaGAATGTTAGGACACTTTCT +
Preference number: 4 (lower is better)
Translates to: KLYSLSKQLTQCLRILYICVCCL*NVRTLS
Trigger: AGAAAGTGTCCTAACATTTCACAAGCAGCAAACACA...TATATACAGTATTCTCAGACACTGGGTTAGTTGTTTACTAAGGGAGTAGAGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434998.5
ENST00000444724.5
CDS-3UTR TCA 90 bp CAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTAAGACATCATTCTTCAATAAGAGCTaGGTGGTTGTCTATAATCTG +
Preference number: 4 (lower is better)
Translates to: QLSQCHALTIFTFLSKTSFFNKS*VVVYNL
Trigger: CAGATTATAGACAACCACTCAGCTCTTATTGAAGAA...TGATGTCTTAGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR TCA 90 bp TCTTGTAAAGATGAAATGGGCATAATTCACAACCAGCAATTCTACTTTAAGGCAAGGAAAATCACATTTTaGCAATGGACTATGGCTGCT +
Preference number: 4 (lower is better)
Translates to: SCKDEMGIIHNQQFYFKARKITF*QWTMAA
Trigger: AGCAGCCATAGTCCATTGTCAAAATGTGATTTTCCT...TGCCTTAAAGTAGAATTGCTGGTTGTGAATTATGCCCATTTCATCTTTACAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444724.5
CDS-3UTR GCA 90 bp GTTCAGACTATATTACTGTGGATAAATTCAGAACAGCTTTTGAAATACTGGCCTTACCTTGGTTGTAACTaGAAACCCTGTAGTTGTGTA +
Preference number: 4 (lower is better)
Translates to: VQTILLWINSEQLLKYWPYLGCN*KPCSCV
Trigger: TACACAACTACAGGGTTTGCAGTTACAACCAAGGTA...AGGCCAGTATTTCAAAAGCTGTTCTGAATTTATCCACAGTAATATAGTCTGAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR GCA 90 bp CAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTAAGACATCAGTCCAATTATCTCAATaGCACGCTTTGACTATATTC +
Preference number: 4 (lower is better)
Translates to: QLSQCHALTIFTFLSKTSVQLSQ*HALTIF
Trigger: GAATATAGTCAAAGCGTGGCATTGAGATAATTGGAC...TGATGTCTTAGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR GCA 90 bp TTCTCATCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATAAAACATGTCAAACTTTaGTGTAGAGCTGTTAGAGAA +
Preference number: 4 (lower is better)
Translates to: FSSNWSSVQLSQCHALTIKHVKL*CRAVRE
Trigger: TTCTCTAACAGCTCTACAGCAAAGTTTGACATGTTT...TATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGATGAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000438828.4
CDS-3UTR GCA 90 bp ACAAATTTTCTAGTAAATAAGAGAGCTTGGGCCTATACCCAGGTTATGTGCGTATATACCCAGGTTATGTaGGTAAACATCATGTTACAT +
Preference number: 4 (lower is better)
Translates to: TNFLVNKRAWAYTQVMCVYTQVM*VNIMLH
Trigger: ATGTAACATGATGTTTACGCACATAACCTGGGTATA...TACGCACATAACCTGGGTATAGGCCCAAGCTCTCTTATTTACTAGAAAATTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422368.5
CDS-3UTR GCA 90 bp CTCATCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTGATATATTCATAAAATaGAGTTCTACTCAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: LIKLVFSPIISMPRFDYIDIFIK*SSTQQQ
Trigger: CTGCTGCTGAGTAGAACTGCATTTTATGAATATATC...AATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGATGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438828.4
CDS-3UTR CCA 90 bp TCATCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCTCTTCACCGTCATTATaGTTGACTCTTAATGAATCA +
Preference number: 4 (lower is better)
Translates to: SSNWSSVQLSQCHALTIFSSPSL*LTLNES
Trigger: TGATTCATTAAGAGTCAACCATAATGACGGTGAAGA...GAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGATGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp TCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTTCTTCACCGTCATTATaGTTGACTCTTAATGAATCA +
Preference number: 4 (lower is better)
Translates to: SSVQLSQCHALTIFTFLSSSPSL*LTLNES
Trigger: TGATTCATTAAGAGTCAACCATAATGACGGTGAAGA...AGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp TCTTGTAAAGATGAAATGGGCATAATTCACAACCAGCAATTCTACTTTAAGGCACAAATACTTGAGCACTaGTTTTTGACTCTTCACCGT +
Preference number: 4 (lower is better)
Translates to: SCKDEMGIIHNQQFYFKAQILEH*FLTLHR
Trigger: ACGGTGAAGAGTCAAAAACCAGTGCTCAAGTATTTG...TGCCTTAAAGTAGAATTGCTGGTTGTGAATTATGCCCATTTCATCTTTACAAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444724.5
CDS-3UTR CCA 90 bp GTTCAGACTATATTACTGTGGATAAATTCAGAACAGCTTTTGAAATACTGGCCTGTAAGTTTCTGTTACTaGGTTTCTCTTCAGGGACAT +
Preference number: 4 (lower is better)
Translates to: VQTILLWINSEQLLKYWPVSFCY*VSLQGH
Trigger: ATGTCCCTGAAGAGAAACCCAGTAACAGAAACTTAC...AGGCCAGTATTTCAAAAGCTGTTCTGAATTTATCCACAGTAATATAGTCTGAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp AAACTCTACTCCCTTAGTAAACAACTAACCCAGTGTCTGAGAATACTGTATATAGTAAGTTTCTGTTACTaGGTTTCTCTTCAGGGACAT +
Preference number: 4 (lower is better)
Translates to: KLYSLSKQLTQCLRILYIVSFCY*VSLQGH
Trigger: ATGTCCCTGAAGAGAAACCCAGTAACAGAAACTTAC...TATATACAGTATTCTCAGACACTGGGTTAGTTGTTTACTAAGGGAGTAGAGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434998.5
ENST00000444724.5
CDS-3UTR CCA 90 bp AAACTCTACTCCCTTAGTAAACAACTAACCCAGTGTCTGAGAATACTGTATATATCATATGGAACATACTaGGATTTCCACATCAAGCGT +
Preference number: 4 (lower is better)
Translates to: KLYSLSKQLTQCLRILYISYGTY*DFHIKR
Trigger: ACGCTTGATGTGGAAATCCCAGTATGTTCCATATGA...TATATACAGTATTCTCAGACACTGGGTTAGTTGTTTACTAAGGGAGTAGAGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434998.5
ENST00000444724.5
CDS-3UTR CCA 90 bp GTTCAGACTATATTACTGTGGATAAATTCAGAACAGCTTTTGAAATACTGGCCTTGGGATTCCATCATATaGAACATACTGGGATTTCCA +
Preference number: 4 (lower is better)
Translates to: VQTILLWINSEQLLKYWPWDSII*NILGFP
Trigger: TGGAAATCCCAGTATGTTCCATATGATGGAATCCCA...AGGCCAGTATTTCAAAAGCTGTTCTGAATTTATCCACAGTAATATAGTCTGAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp TCTTGTAAAGATGAAATGGGCATAATTCACAACCAGCAATTCTACTTTAAGGCATGGGATTCCATCATATaGAACATACTGGGATTTCCA +
Preference number: 4 (lower is better)
Translates to: SCKDEMGIIHNQQFYFKAWDSII*NILGFP
Trigger: TGGAAATCCCAGTATGTTCCATATGATGGAATCCCA...TGCCTTAAAGTAGAATTGCTGGTTGTGAATTATGCCCATTTCATCTTTACAAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444724.5
CDS-3UTR CCA 90 bp TCATCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCGCAGTACTATTGTTTTaGGTTAAGCATGTATCTCTT +
Preference number: 4 (lower is better)
Translates to: SSNWSSVQLSQCHALTIFAVLLF*VKHVSL
Trigger: AAGAGATACATGCTTAACCCAAAACAATAGTACTGC...GAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp CAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTAAGACATCATTCCATAGACAATGCTaGTTCTTTGGGTTCTTGTTT +
Preference number: 4 (lower is better)
Translates to: QLSQCHALTIFTFLSKTSFHRQC*FFGFLF
Trigger: AAACAAGAACCCAAAGAACCAGCATTGTCTATGGAA...TGATGTCTTAGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp TCTTGTAAAGATGAAATGGGCATAATTCACAACCAGCAATTCTACTTTAAGGCACAAAGGAAGAATCCCTaGAGTCCATACAGATTAGAT +
Preference number: 4 (lower is better)
Translates to: SCKDEMGIIHNQQFYFKAQRKNP*SPYRLD
Trigger: ATCTAATCTGTATGGACTCCAGGGATTCTTCCTTTG...TGCCTTAAAGTAGAATTGCTGGTTGTGAATTATGCCCATTTCATCTTTACAAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444724.5
CDS-3UTR CCA 90 bp ACCCAGGTTATGTGCGTAAACATCATGTTACATTGCTTCCAAAAGTATCAATTATCATCATTTGTGCATTaGATTCCCCCAATGACTGAA +
Preference number: 4 (lower is better)
Translates to: TQVMCVNIMLHCFQKYQLSSFVH*IPPMTE
Trigger: TTCAGTCATTGGGGGAATCCAATGCACAAATGATGA...TAATTGATACTTTTGGAAGCAATGTAACATGATGTTTACGCACATAACCTGGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422368.5
CDS-3UTR CCA 90 bp GTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTAAGACATTGTACCCTTGGACTTaGCAAAGATATATTAAACCT +
Preference number: 4 (lower is better)
Translates to: VQLSQCHALTIFTFLSKTLYPWT*QRYIKP
Trigger: AGGTTTAATATATCTTTGCCAAGTCCAAGGGTACAA...TGTCTTAGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438828.4
CDS-3UTR TCA 90 bp GTTCAGACTATATTACTGTGGATAAATTCAGAACAGCTTTTGAAATACTGGCCTATCATCTCAAATACTTaGGCACTGGTTTTTGACTCT +
Preference number: 4 (lower is better)
Translates to: VQTILLWINSEQLLKYWPIISNT*ALVFDS
Trigger: AGAGTCAAAAACCAGTGCTCAAGTATTTGAGATGAT...AGGCCAGTATTTCAAAAGCTGTTCTGAATTTATCCACAGTAATATAGTCTGAAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320443.12
ENST00000428585.5
CDS-3UTR TCA 90 bp ACCCAGGTTATGTGCGTAAACATCATGTTACATTGCTTCCAAAAGTATCAATTAATTGGATTCCCCCAATaGCTGAAGTTCATATTGAAT +
Preference number: 4 (lower is better)
Translates to: TQVMCVNIMLHCFQKYQLIGFPQ*LKFILN
Trigger: ATTCAATATGAACTTCAGTCATTGGGGGAATCCAAT...TAATTGATACTTTTGGAAGCAATGTAACATGATGTTTACGCACATAACCTGGGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422368.5
CDS-3UTR TCA 90 bp AAACTCTACTCCCTTAGTAAACAACTAACCCAGTGTCTGAGAATACTGTATATAATTGGATTCCCCCAATaGCTGAAGTTCATATTGAAT +
Preference number: 4 (lower is better)
Translates to: KLYSLSKQLTQCLRILYIIGFPQ*LKFILN
Trigger: ATTCAATATGAACTTCAGTCATTGGGGGAATCCAAT...TATATACAGTATTCTCAGACACTGGGTTAGTTGTTTACTAAGGGAGTAGAGTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444724.5
CDS-3UTR TCA 90 bp TCTTGTAAAGATGAAATGGGCATAATTCACAACCAGCAATTCTACTTTAAGGCATCTAAGAGATTTGCTTaGAACTCTACTCCCTTAGTA +
Preference number: 4 (lower is better)
Translates to: SCKDEMGIIHNQQFYFKASKRFA*NSTPLV
Trigger: TACTAAGGGAGTAGAGTTTCAAGCAAATCTCTTAGA...TGCCTTAAAGTAGAATTGCTGGTTGTGAATTATGCCCATTTCATCTTTACAAGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444724.5
CDS-3UTR TCA 90 bp AAACTCTACTCCCTTAGTAAACAACTAACCCAGTGTCTGAGAATACTGTATATACTAGAACGATACACATaGAATTCATGTAGTAGCTAC +
Preference number: 4 (lower is better)
Translates to: KLYSLSKQLTQCLRILYILERYT*NSCSSY
Trigger: GTAGCTACTACATGAATTTCATGTGTATCGTTCTAG...TATATACAGTATTCTCAGACACTGGGTTAGTTGTTTACTAAGGGAGTAGAGTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444724.5
CDS-3UTR TCA 90 bp GTTCAGACTATATTACTGTGGATAAATTCAGAACAGCTTTTGAAATACTGGCCTATTGTTTTAAAATGTTaGTGCTTGGCTGAGTTGCAG +
Preference number: 4 (lower is better)
Translates to: VQTILLWINSEQLLKYWPIVLKC*CLAELQ
Trigger: CTGCAACTCAGCCAAGCATCAACATTTTAAAACAAT...AGGCCAGTATTTCAAAAGCTGTTCTGAATTTATCCACAGTAATATAGTCTGAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000438828.4
CDS-3UTR GCA 90 bp GTTCAGACTATATTACTGTGGATAAATTCAGAACAGCTTTTGAAATACTGGCCTATTCTCATCTCTAACTaGAGTTTCCTCTTCTTCAAG +
Preference number: 4 (lower is better)
Translates to: VQTILLWINSEQLLKYWPILISN*SFLFFK
Trigger: CTTGAAGAAGAGGAAACTGCAGTTAGAGATGAGAAT...AGGCCAGTATTTCAAAAGCTGTTCTGAATTTATCCACAGTAATATAGTCTGAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp CTATACCCAGGTTATGTGCGTAAACATCATGTTACATTGCTTCCAAAAGTATCAGAAGAATGTAATTGCTaGTATTGTCTGCTAGAGTAT +
Preference number: 4 (lower is better)
Translates to: LYPGYVRKHHVTLLPKVSEECNC*YCLLEY
Trigger: ATACTCTAGCAGACAATACCAGCAATTACATTCTTC...TGATACTTTTGGAAGCAATGTAACATGATGTTTACGCACATAACCTGGGTATAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422368.5
CDS-3UTR CCA 90 bp CAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTAAGACATCAGAAGAATGTAATTGCTaGTATTGTCTGCTAGAGTAT +
Preference number: 4 (lower is better)
Translates to: QLSQCHALTIFTFLSKTSEECNC*YCLLEY
Trigger: ATACTCTAGCAGACAATACCAGCAATTACATTCTTC...TGATGTCTTAGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp CAACTAACCCAGTGTCTGAGAATACTGTATATAACATACCTAATGCTTGAGAACTTGTACCCTTGGACTTaGCAAAGATATATTAAACCT +
Preference number: 4 (lower is better)
Translates to: QLTQCLRILYITYLMLENLYPWT*QRYIKP
Trigger: AGGTTTAATATATCTTTGCCAAGTCCAAGGGTACAA...GTTCTCAAGCATTAGGTATGTTATATACAGTATTCTCAGACACTGGGTTAGTTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434998.5
CDS-3UTR CCA 90 bp TCTTGTAAAGATGAAATGGGCATAATTCACAACCAGCAATTCTACTTTAAGGCAACCTGCATTAACAAATaGGATTCCATCATATGGAAC +
Preference number: 4 (lower is better)
Translates to: SCKDEMGIIHNQQFYFKATCINK*DSIIWN
Trigger: GTTCCATATGATGGAATCCCATTTGTTAATGCAGGT...TGCCTTAAAGTAGAATTGCTGGTTGTGAATTATGCCCATTTCATCTTTACAAGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444724.5
CDS-3UTR GCA 90 bp GTTCAGACTATATTACTGTGGATAAATTCAGAACAGCTTTTGAAATACTGGCCTTTAAATTTGGCAACCTaGCTGTATAAAATGCCAACA +
Preference number: 4 (lower is better)
Translates to: VQTILLWINSEQLLKYWPLNLAT*LYKMPT
Trigger: TGTTGGCATTTTATACAGGCAGGTTGCCAAATTTAA...AGGCCAGTATTTCAAAAGCTGTTCTGAATTTATCCACAGTAATATAGTCTGAAC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000438828.4
CDS-3UTR CCA 90 bp GTTCAGACTATATTACTGTGGATAAATTCAGAACAGCTTTTGAAATACTGGCCTTCTTCACCGTCATTATaGTTGACTCTTAATGAATCA +
Preference number: 4 (lower is better)
Translates to: VQTILLWINSEQLLKYWPSSPSL*LTLNES
Trigger: TGATTCATTAAGAGTCAACCATAATGACGGTGAAGA...AGGCCAGTATTTCAAAAGCTGTTCTGAATTTATCCACAGTAATATAGTCTGAAC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CCA 90 bp TCTTGTAAAGATGAAATGGGCATAATTCACAACCAGCAATTCTACTTTAAGGCATCTTCACCGTCATTATaGTTGACTCTTAATGAATCA +
Preference number: 4 (lower is better)
Translates to: SCKDEMGIIHNQQFYFKASSPSL*LTLNES
Trigger: TGATTCATTAAGAGTCAACCATAATGACGGTGAAGA...TGCCTTAAAGTAGAATTGCTGGTTGTGAATTATGCCCATTTCATCTTTACAAGA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444724.5
CDS-3UTR CCA 90 bp AAACTCTACTCCCTTAGTAAACAACTAACCCAGTGTCTGAGAATACTGTATATAGAAGAATGTAATTGCTaGTATTGTCTGCTAGAGTAT +
Preference number: 4 (lower is better)
Translates to: KLYSLSKQLTQCLRILYIEECNC*YCLLEY
Trigger: ATACTCTAGCAGACAATACCAGCAATTACATTCTTC...TATATACAGTATTCTCAGACACTGGGTTAGTTGTTTACTAAGGGAGTAGAGTTT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434998.5
ENST00000444724.5
CDS-3UTR CCA 90 bp AAACTCTACTCCCTTAGTAAACAACTAACCCAGTGTCTGAGAATACTGTATATAAAACTCAGGCAGAAGTaGTTACATTTATCTCATCTT +
Preference number: 4 (lower is better)
Translates to: KLYSLSKQLTQCLRILYIKLRQK*LHLSHL
Trigger: AAGATGAGATAAATGTAACCACTTCTGCCTGAGTTT...TATATACAGTATTCTCAGACACTGGGTTAGTTGTTTACTAAGGGAGTAGAGTTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434998.5
ENST00000444724.5
CDS TCA 90 bp CTCCTAAGACGGCAGGCCCATATAGGTGTATTAGAAGAAAGTGGCTaGAGAGGCCCCAGAAGGGGTTCTTCCAGCATTCCGGTCACTGAC +
Preference number: 5 (lower is better)
Translates to: LLRRQAHIGVLEESG*RGPRRGSSSIPVTD
Trigger: GTCAGTGACCGGAATGCTGGAAGAACCCCTTCTGGGGCCTCTTCAGCCACTTTCTTCTAATACACCTATATGGGCCTGCCGTCTTAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000414439.5
ENST00000422368.5
ENST00000428585.5
ENST00000434998.5
ENST00000438828.4
ENST00000444724.5
ENST00000457031.5
ENST00000471271.5
CDS-3UTR CAA 90 bp CCGAGCTGGACAAGTGGCTTTGTAGAGCTGACAAGACCTGCTTTCCTGCTCACTCCTGTCCATTTTCTGTaGGGCTGGCAACGATCATCA +
Preference number: 5 (lower is better)
Translates to: PSWTSGFVELTRPAFLLTPVHFL*GWQRSS
Trigger: TGATGATCGTTGCCAGCCCAACAGAAAATGGACAGG...AGTGAGCAGGAAAGCAGGTCTTGTCAGCTCTACAAAGCCACTTGTCCAGCTCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457031.5
CDS-3UTR CAA 90 bp CTGGGTTTCTCTTCAGGGACATCCCGAGGACTATTCACATCCACAAGTTGCCCCCTGAAGTTCTTCCTTTaGGGGGCACTAAATCATGAT +
Preference number: 5 (lower is better)
Translates to: LGFSSGTSRGLFTSTSCPLKFFL*GALNHD
Trigger: ATCATGATTTAGTGCCCCCAAAAGGAAGAACTTCAG...GGGGCAACTTGTGGATGTGAATAGTCCTCGGGATGTCCCTGAAGAGAAACCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000427712.5
CDS-3UTR CAA 90 bp CTTCCAGCATTCCGGTCACTGACTTTTTGGGCAATGGGAAGGATGTTTGAGGATCTGAGGTATAATCACTaGTGCCATTCCTGTCTGGGT +
Preference number: 5 (lower is better)
Translates to: LPAFRSLTFWAMGRMFEDLRYNH*CHSCLG
Trigger: ACCCAGACAGGAATGGCACAAGTGATTATACCTCAG...ATCCTCAAACATCCTTCCCATTGCCCAAAAAGTCAGTGACCGGAATGCTGGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427712.5
CDS-3UTR CAA 90 bp TGTTTGATGTCTAAGCCAGCTGATGGAGAAGAACCAATGCAGTATCCCTTCTGGCCGGTCACTGACTTTTaGGGCAATGGGAAGGATGTT +
Preference number: 5 (lower is better)
Translates to: CLMSKPADGEEPMQYPFWPVTDF*GNGKDV
Trigger: AACATCCTTCCCATTGCCCAAAAAGTCAGTGACCGG...CCAGAAGGGATACTGCATTGGTTCTTCTCCATCAGCTGGCTTAGACATCAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438828.4
CDS TCA 90 bp CTTGGTTGTAACTGCAAACCCTGTAGTTGTGTAAATATTTTGGGCTaGAATGAGGAGAGTGAGGAGAGCAAGTGGGTTGGCTCAGGAGAC +
Preference number: 5 (lower is better)
Translates to: LGCNCKPCSCVNILG*NEESEESKWVGSGD
Trigger: GTCTCCTGAGCCAACCCACTTGCTCTCCTCACTCTCCTCATTTCAGCCCAAAATATTTACACAACTACAGGGTTTGCAGTTACAACCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000414439.5
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CAA 90 bp CCGAGCTGGACAAGTGGCTTTGTAGAGCTGACAAGACCTGCTTTCCTGCTCACTCAATGGGAAGGATGTTaGAGGATGAAGAATGTAATT +
Preference number: 5 (lower is better)
Translates to: PSWTSGFVELTRPAFLLTQWEGC*RMKNVI
Trigger: AATTACATTCTTCATCCTCAAACATCCTTCCCATTG...AGTGAGCAGGAAAGCAGGTCTTGTCAGCTCTACAAAGCCACTTGTCCAGCTCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457031.5
CDS-3UTR CAA 90 bp TGTTTGATGTCTAAGCCAGCTGATGGAGAAGAACCAATGCAGTATCCCTTCTGGGGAAACCTTTTCTTCTaGGCCCATACTGACACTCCA +
Preference number: 5 (lower is better)
Translates to: CLMSKPADGEEPMQYPFWGNLFF*AHTDTP
Trigger: TGGAGTGTCAGTATGGGCCAAGAAGAAAAGGTTTCC...CCAGAAGGGATACTGCATTGGTTCTTCTCCATCAGCTGGCTTAGACATCAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438828.4
CDS-3UTR CAA 90 bp TTACAGTTGGTAAGTTTCTGTTACTGGGTTTCTCTTCAGGGACATCCCGAGGACGGCAACGATCATCATTaGTGCATTGGATTCCCCCAA +
Preference number: 5 (lower is better)
Translates to: LQLVSFCYWVSLQGHPEDGNDHH*CIGFPQ
Trigger: TTGGGGGAATCCAATGCACAAATGATGATCGTTGCC...GTCCTCGGGATGTCCCTGAAGAGAAACCCAGTAACAGAAACTTACCAACTGTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427712.5
CDS-3UTR CAA 90 bp TGTTTGATGTCTAAGCCAGCTGATGGAGAAGAACCAATGCAGTATCCCTTCTGGGGCAACGATCATCATTaGTGCATTGGATTCCCCCAA +
Preference number: 5 (lower is better)
Translates to: CLMSKPADGEEPMQYPFWGNDHH*CIGFPQ
Trigger: TTGGGGGAATCCAATGCACAAATGATGATCGTTGCC...CCAGAAGGGATACTGCATTGGTTCTTCTCCATCAGCTGGCTTAGACATCAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438828.4
CDS TCA 90 bp TCAACATCTCCAACTTCTACCAGCTCGTCCATTGCAACTAGATTTTaGTCTGGTTCTGGAAGGTTACCCATGGTGGAGGCAGTACTATTG +
Preference number: 5 (lower is better)
Translates to: STSPTSTSSSIATRF*SGSGRLPMVEAVLL
Trigger: CAATAGTACTGCCTCCACCATGGGTAACCTTCCAGAACCAGATCAAAATCTAGTTGCAATGGACGAGCTGGTAGAAGTTGGAGATGTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000414439.5
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CAA 90 bp TTCAGGGACATCCCGAGGACTATTCACATCCACAAGTTGCCCCTGAGGTATAATCAGAAATGTCCTTTCTaGTCCACTGAAGTTCTTCCT +
Preference number: 5 (lower is better)
Translates to: FRDIPRTIHIHKLPLRYNQKCPF*STEVLP
Trigger: AGGAAGAACTTCAGTGGACAAGAAAGGACATTTCTG...ATTATACCTCAGGGGCAACTTGTGGATGTGAATAGTCCTCGGGATGTCCCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427712.5
CDS-3UTR CAA 90 bp AAGAGAGCTTGGGCCTATACCCAGGTTATGTGCGTAAACATCATGTTACATTGCCTGAGGTATAATCACTaGTGCCATTCCTGTCTGGGT +
Preference number: 5 (lower is better)
Translates to: KRAWAYTQVMCVNIMLHCLRYNH*CHSCLG
Trigger: ACCCAGACAGGAATGGCACAAGTGATTATACCTCAG...GCAATGTAACATGATGTTTACGCACATAACCTGGGTATAGGCCCAAGCTCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422368.5
CDS-3UTR CAA 90 bp AAATCCGAGCTGGACAAGTGGCTTTGTAGAGCTGACAAGACCTGCTTTCCTGCTTATCCACTCTTACAGTaGGTAAGTTTCTGTTACTGG +
Preference number: 5 (lower is better)
Translates to: KSELDKWLCRADKTCFPAYPLLQ*VSFCYW
Trigger: CCAGTAACAGAAACTTACCAACTGTAAGAGTGGATA...AGCAGGAAAGCAGGTCTTGTCAGCTCTACAAAGCCACTTGTCCAGCTCGGATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457031.5
CDS-3UTR CAA 90 bp CTGTACCTTTTTAATGTAAATCCGAGCTGGACAAGTGGCTTTGTAGAGCTGACACCGGTCACTGACTTTTaGGGCAATGGGAAGGATGTT +
Preference number: 5 (lower is better)
Translates to: LYLFNVNPSWTSGFVELTPVTDF*GNGKDV
Trigger: AACATCCTTCCCATTGCCCAAAAAGTCAGTGACCGG...TGTCAGCTCTACAAAGCCACTTGTCCAGCTCGGATTTACATTAAAAAGGTACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457031.5
CDS-3UTR CAA 90 bp TGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTAGGAGAGCAAGTGGGTaGGCTCAGGAGACAAAGAAC +
Preference number: 5 (lower is better)
Translates to: WSSVQLSQCHALTIFTFLRRASG*AQETKN
Trigger: GTTCTTTGTCTCCTGAGCCAACCCACTTGCTCTCCT...AAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CAA 90 bp AAATCCGAGCTGGACAAGTGGCTTTGTAGAGCTGACAAGACCTGCTTTCCTGCTTGTAGGAGAATCATTTaGTCCAAAGGAAGAATCCCT +
Preference number: 5 (lower is better)
Translates to: KSELDKWLCRADKTCFPACRRII*SKGRIP
Trigger: AGGGATTCTTCCTTTGGACAAAATGATTCTCCTACA...AGCAGGAAAGCAGGTCTTGTCAGCTCTACAAAGCCACTTGTCCAGCTCGGATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457031.5
CDS-3UTR CAA 90 bp TTTAATGTAAATCCGAGCTGGACAAGTGGCTTTGTAGAGCTGACAAGACCTGCTGGCAACGATCATCATTaGTGCATTGGATTCCCCCAA +
Preference number: 5 (lower is better)
Translates to: FNVNPSWTSGFVELTRPAGNDHH*CIGFPQ
Trigger: TTGGGGGAATCCAATGCACAAATGATGATCGTTGCC...AGCAGGTCTTGTCAGCTCTACAAAGCCACTTGTCCAGCTCGGATTTACATTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457031.5
CDS-3UTR CAA 90 bp CTGAGGTATAATCACTTGTGCCATTCCTGTCTGGGTAGGTGGAATTACACGAAGCTTGAGCACTGGTTTTaGACTCTTCACCGTCATTAT +
Preference number: 5 (lower is better)
Translates to: LRYNHLCHSCLGRWNYTKLEHWF*TLHRHY
Trigger: ATAATGACGGTGAAGAGTCAAAAACCAGTGCTCAAG...CTTCGTGTAATTCCACCTACCCAGACAGGAATGGCACAAGTGATTATACCTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427712.5
CDS-3UTR CAA 90 bp AGATTCTTTGGGGCTCTAACTAGTCTAAGAGATTTGCTTGAAACTCTACTCCCTCCTGTCCATTTTCTGTaGGGCTGGCAACGATCATCT +
Preference number: 5 (lower is better)
Translates to: RFFGALTSLRDLLETLLPPVHFL*GWQRSS
Trigger: AGATGATCGTTGCCAGCCCAACAGAAAATGGACAGG...AGGGAGTAGAGTTTCAAGCAAATCTCTTAGACTAGTTAGAGCCCCAAAGAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434998.5
CDS-3UTR CAA 90 bp CTGTACCTTTTTAATGTAAATCCGAGCTGGACAAGTGGCTTTGTAGAGCTGACACTGAGGTATAATCACTaGTGCCATTCCTGTCTGGGT +
Preference number: 5 (lower is better)
Translates to: LYLFNVNPSWTSGFVELTLRYNH*CHSCLG
Trigger: ACCCAGACAGGAATGGCACAAGTGATTATACCTCAG...TGTCAGCTCTACAAAGCCACTTGTCCAGCTCGGATTTACATTAAAAAGGTACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457031.5
CDS-3UTR CAA 90 bp CTGTTGGGCTGGCAACGATCATCATTTGTGCATTGGATTCCCCCAATGACTGAATATCCACTCTTACAGTaGGTAAGTTTCTGTTACTGG +
Preference number: 5 (lower is better)
Translates to: LLGWQRSSFVHWIPPMTEYPLLQ*VSFCYW
Trigger: CCAGTAACAGAAACTTACCAACTGTAAGAGTGGATA...TTCAGTCATTGGGGGAATCCAATGCACAAATGATGATCGTTGCCAGCCCAACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427712.5
CDS-3UTR CAA 90 bp TGTCTGGGTAGGTGGAATTACACGAAGTACCTGTCCATTTTCTGTTGGGCTGGCCAATGGGAAGGATGTTaGAGGATGAAGAATGTAATT +
Preference number: 5 (lower is better)
Translates to: CLGRWNYTKYLSIFCWAGQWEGC*RMKNVI
Trigger: AATTACATTCTTCATCCTCAAACATCCTTCCCATTG...GCCAGCCCAACAGAAAATGGACAGGTACTTCGTGTAATTCCACCTACCCAGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427712.5
CDS-3UTR CAA 90 bp TCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCCCGGTCACTGACTTTTaGGGCAATGGGAAGGATGTT +
Preference number: 5 (lower is better)
Translates to: SNWSSVQLSQCHALTIFTPVTDF*GNGKDV
Trigger: AACATCCTTCCCATTGCCCAAAAAGTCAGTGACCGG...GGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CAA 90 bp GTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCCCGGTCACTGACTTTTaGGGCAATGGGAAGGATGTT +
Preference number: 5 (lower is better)
Translates to: VFSPIISMPRFDYIHLPFPVTDF*GNGKDV
Trigger: AACATCCTTCCCATTGCCCAAAAAGTCAGTGACCGG...GAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CAA 90 bp CTAGAGTATCCACTCTTACAGTTGGTAAGTTTCTGTTACTGGGTTTCTCTTCAGCCGGTCACTGACTTTTaGGGCAATGGGAAGGATGTT +
Preference number: 5 (lower is better)
Translates to: LEYPLLQLVSFCYWVSLQPVTDF*GNGKDV
Trigger: AACATCCTTCCCATTGCCCAAAAAGTCAGTGACCGG...CTGAAGAGAAACCCAGTAACAGAAACTTACCAACTGTAAGAGTGGATACTCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427712.5
CDS-3UTR CAA 90 bp TGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTCCGGTCACTGACTTTTaGGGCAATGGGAAGGATGTT +
Preference number: 5 (lower is better)
Translates to: WSSVQLSQCHALTIFTFLPVTDF*GNGKDV
Trigger: AACATCCTTCCCATTGCCCAAAAAGTCAGTGACCGG...AAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CAA 90 bp GTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCGGTACCTCATCGGGTTaGAACAGTTCCCTTTCCACA +
Preference number: 5 (lower is better)
Translates to: VFSPIISMPRFDYIHLPFGTSSG*NSSLST
Trigger: TGTGGAAAGGGAACTGTTCAAACCCGATGAGGTACC...GAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CAA 90 bp GTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTAAGACAAGGAGAGCAAGTGGGTaGGCTCAGGAGACAAAGAAC +
Preference number: 5 (lower is better)
Translates to: VQLSQCHALTIFTFLSKTRRASG*AQETKN
Trigger: GTTCTTTGTCTCCTGAGCCAACCCACTTGCTCTCCT...TGTCTTAGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CAA 90 bp TCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTAGGAGAGCAAGTGGGTaGGCTCAGGAGACAAAGAAC +
Preference number: 5 (lower is better)
Translates to: SSVQLSQCHALTIFTFLSRRASG*AQETKN
Trigger: GTTCTTTGTCTCCTGAGCCAACCCACTTGCTCTCCT...AGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CAA 90 bp TTCAGGGACATCCCGAGGACTATTCACATCCACAAGTTGCCCCTGAGGTATAATTGTAGGAGAATCATTTaGTCCAAAGGAAGAATCCCT +
Preference number: 5 (lower is better)
Translates to: FRDIPRTIHIHKLPLRYNCRRII*SKGRIP
Trigger: AGGGATTCTTCCTTTGGACAAAATGATTCTCCTACA...ATTATACCTCAGGGGCAACTTGTGGATGTGAATAGTCCTCGGGATGTCCCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427712.5
CDS-3UTR CAA 90 bp TGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTCCTGTCCATTTTCTGTaGGGCTGGCAACGATCATCA +
Preference number: 5 (lower is better)
Translates to: WSSVQLSQCHALTIFTFLPVHFL*GWQRSS
Trigger: TGATGATCGTTGCCAGCCCAACAGAAAATGGACAGG...AAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402905.7
ENST00000438828.4
CDS-3UTR CAA 90 bp GCTAGAGTATCCACTCTTACAGTTGGTAAGTTTCTGTTACTGGGTTTCTCTTCACCTGTCCATTTTCTGTaGGGCTGGCAACGATCATCA +
Preference number: 5 (lower is better)
Translates to: ARVSTLTVGKFLLLGFSSPVHFL*GWQRSS
Trigger: TGATGATCGTTGCCAGCCCAACAGAAAATGGACAGG...TGAAGAGAAACCCAGTAACAGAAACTTACCAACTGTAAGAGTGGATACTCTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427712.5
CDS-3UTR CAA 90 bp AGAAGAACCAATGCAGTATCCCTTCTGGAGAGATTAAGATTTTCAAGGTCCTCACCTGTCCATTTTCTGTaGGGCTGGCAACGATCATCA +
Preference number: 5 (lower is better)
Translates to: RRTNAVSLLERLRFSRSSPVHFL*GWQRSS
Trigger: TGATGATCGTTGCCAGCCCAACAGAAAATGGACAGG...TGAGGACCTTGAAAATCTTAATCTCTCCAGAAGGGATACTGCATTGGTTCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438828.4
CDS-3UTR CAA 90 bp TCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTCCTGTCCATTTTCTGTaGGGCTGGCAACGATCATCT +
Preference number: 5 (lower is better)
Translates to: SSVQLSQCHALTIFTFLSPVHFL*GWQRSS
Trigger: AGATGATCGTTGCCAGCCCAACAGAAAATGGACAGG...AGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320443.12
ENST00000428585.5
CDS-3UTR CAA 90 bp TGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTCTGAGGTATAATCACTaGTGCCATTCCTGTCTGGGT +
Preference number: 5 (lower is better)
Translates to: WSSVQLSQCHALTIFTFLLRYNH*CHSCLG
Trigger: ACCCAGACAGGAATGGCACAAGTGATTATACCTCAG...AAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CAA 90 bp TCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCCTGAGGTATAATCACTaGTGCCATTCCTGTCTGGGT +
Preference number: 5 (lower is better)
Translates to: SNWSSVQLSQCHALTIFTLRYNH*CHSCLG
Trigger: ACCCAGACAGGAATGGCACAAGTGATTATACCTCAG...GGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CAA 90 bp TCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCGGAAACCTTTTCTTCTaGGCCCATACTGACACTCCA +
Preference number: 5 (lower is better)
Translates to: SNWSSVQLSQCHALTIFTGNLFF*AHTDTP
Trigger: TGGAGTGTCAGTATGGGCCAAGAAGAAAAGGTTTCC...GGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CAA 90 bp CTCATCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTGGTACCTCATCGGGTTaGAACAGTTCCCTTTCCACA +
Preference number: 5 (lower is better)
Translates to: LIKLVFSPIISMPRFDYIGTSSG*NSSLST
Trigger: TGTGGAAAGGGAACTGTTCAAACCCGATGAGGTACC...AATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGATGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CAA 90 bp TCATCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCCAGGAGAGGTGTACCTaGGTTGTAACTGCAAACCCT +
Preference number: 5 (lower is better)
Translates to: SSNWSSVQLSQCHALTIFQERCT*VVTANP
Trigger: AGGGTTTGCAGTTACAACCAAGGTACACCTCTCCTG...GAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CAA 90 bp TCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTCAGGAGAGGTGTACCTaGGTTGTAACTGCAAACCCT +
Preference number: 5 (lower is better)
Translates to: SSVQLSQCHALTIFTFLSQERCT*VVTANP
Trigger: AGGGTTTGCAGTTACAACCAAGGTACACCTCTCCTG...AGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CAA 90 bp TTCTCATCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATACAGGAGAGGTGTACCTaGGTTGTAACTGCAAACCCT +
Preference number: 5 (lower is better)
Translates to: FSSNWSSVQLSQCHALTIQERCT*VVTANP
Trigger: AGGGTTTGCAGTTACAACCAAGGTACACCTCTCCTG...TATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGATGAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CAA 90 bp CCTGAAACCAAGTCAATTAAGAATGGGAGGCTGGACTTAGAAAAGCCAAAAGTGCTACCAGCTCGTCCATaGCAACTAGATTTTGATCTG +
Preference number: 5 (lower is better)
Translates to: PETKSIKNGRLDLEKPKVLPARP*QLDFDL
Trigger: CAGATCAAAATCTAGTTGCAATGGACGAGCTGGTAG...CACTTTTGGCTTTTCTAAGTCCAGCCTCCCATTCTTAATTGACTTGGTTTCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000438828.4
CDS TCA 90 bp ATAATCTGTATTGGAATAGTCTGCACATCTCCCAACAGAATCCGATaGACAGTTCCTTCCAGATTCCCTGTATCCTCAACATCTCCAACT +
Preference number: 5 (lower is better)
Translates to: IICIGIVCTSPNRIR*TVPSRFPVSSTSPT
Trigger: AGTTGGAGATGTTGAGGATACAGGGAATCTGGAAGGAACTGTTCATCGGATTCTGTTGGGAGATGTGCAGACTATTCCAATACAGATTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000414439.5
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CAA 90 bp CCTGAAACCAAGTCAATTAAGAATGGGAGGCTGGACTTAGAAAAGCCAAAAGTGCAGAAATGTCCTTTCTaGTCCACTGAAGTTCTTCCT +
Preference number: 5 (lower is better)
Translates to: PETKSIKNGRLDLEKPKVQKCPF*STEVLP
Trigger: AGGAAGAACTTCAGTGGACAAGAAAGGACATTTCTG...CACTTTTGGCTTTTCTAAGTCCAGCCTCCCATTCTTAATTGACTTGGTTTCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000438828.4
CDS-3UTR CAA 90 bp CTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTCAGAAATGTCCTTTCTaGTCCACTGAAGTTCTTCCT +
Preference number: 5 (lower is better)
Translates to: LVFSPIISMPRFDYIHLPQKCPF*STEVLP
Trigger: AGGAAGAACTTCAGTGGACAAGAAAGGACATTTCTG...AGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CAA 90 bp CTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTCTTGAGCACTGGTTTTaGACTCTTCACCGTCATTAT +
Preference number: 5 (lower is better)
Translates to: LVFSPIISMPRFDYIHLPLEHWF*TLHRHY
Trigger: ATAATGACGGTGAAGAGTCAAAAACCAGTGCTCAAG...AGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CAA 90 bp TTCTCATCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATACTGAGGTATAATCACTaGTGCCATTCCTGTCTGGGT +
Preference number: 5 (lower is better)
Translates to: FSSNWSSVQLSQCHALTILRYNH*CHSCLG
Trigger: ACCCAGACAGGAATGGCACAAGTGATTATACCTCAG...TATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGATGAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CAA 90 bp GTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTAAGACAGGAAACCTTTTCTTCTaGGCCCATACTGACACTCCA +
Preference number: 5 (lower is better)
Translates to: VQLSQCHALTIFTFLSKTGNLFF*AHTDTP
Trigger: TGGAGTGTCAGTATGGGCCAAGAAGAAAAGGTTTCC...TGTCTTAGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CAA 90 bp CAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTAAGACATCAGGTACCTCATCGGGTTaGAACAGTTCCCTTTCCACA +
Preference number: 5 (lower is better)
Translates to: QLSQCHALTIFTFLSKTSGTSSG*NSSLST
Trigger: TGTGGAAAGGGAACTGTTCAAACCCGATGAGGTACC...TGATGTCTTAGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CAA 90 bp GTTCAGACTATATTACTGTGGATAAATTCAGAACAGCTTTTGAAATACTGGCCTAGGAGAGCAAGTGGGTaGGCTCAGGAGACAAAGAAC +
Preference number: 5 (lower is better)
Translates to: VQTILLWINSEQLLKYWPRRASG*AQETKN
Trigger: GTTCTTTGTCTCCTGAGCCAACCCACTTGCTCTCCT...AGGCCAGTATTTCAAAAGCTGTTCTGAATTTATCCACAGTAATATAGTCTGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CAA 90 bp CAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTAAGACATCACAGGAGAGGTGTACCTaGGTTGTAACTGCAAACCCT +
Preference number: 5 (lower is better)
Translates to: QLSQCHALTIFTFLSKTSQERCT*VVTANP
Trigger: AGGGTTTGCAGTTACAACCAAGGTACACCTCTCCTG...TGATGTCTTAGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CAA 90 bp TCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTAAGACATCAGAAGTCCTACCAGCTCGTCCATaGCAACTAGATTTTGATCTG +
Preference number: 5 (lower is better)
Translates to: SQCHALTIFTFLSKTSEVLPARP*QLDFDL
Trigger: CAGATCAAAATCTAGTTGCAATGGACGAGCTGGTAG...GACTTCTGATGTCTTAGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CAA 90 bp CTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTGGTTCTTTGGGTTCTaGTTTAACTTGGCTCACAGA +
Preference number: 5 (lower is better)
Translates to: LVFSPIISMPRFDYIHLPWFFGF*FNLAHR
Trigger: TCTGTGAGCCAAGTTAAACAAGAACCCAAAGAACCA...AGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CAA 90 bp TCATCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCGGCAACGATCATCATTaGTGCATTGGATTCCCCCAA +
Preference number: 5 (lower is better)
Translates to: SSNWSSVQLSQCHALTIFGNDHH*CIGFPQ
Trigger: TTGGGGGAATCCAATGCACAAATGATGATCGTTGCC...GAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402905.7
ENST00000438828.4
CDS-3UTR CAA 90 bp CTATACCCAGGTTATGTGCGTAAACATCATGTTACATTGCTTCCAAAAGTATCACCTGTCCATTTTCTGTaGGGCTGGCAACGATCATCA +
Preference number: 5 (lower is better)
Translates to: LYPGYVRKHHVTLLPKVSPVHFL*GWQRSS
Trigger: TGATGATCGTTGCCAGCCCAACAGAAAATGGACAGG...TGATACTTTTGGAAGCAATGTAACATGATGTTTACGCACATAACCTGGGTATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422368.5
CDS-3UTR CAA 90 bp CTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTCTTTCAGGTTCCAAATaGGACATAAATCTCTGGCCA +
Preference number: 5 (lower is better)
Translates to: LVFSPIISMPRFDYIHLPLSGSK*DINLWP
Trigger: TGGCCAGAGATTTATGTCCAATTTGGAACCTGAAAG...AGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438828.4
CDS-3UTR CAA 90 bp TCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCCAGAAATGTCCTTTCTaGTCCACTGAAGTTCTTCCT +
Preference number: 5 (lower is better)
Translates to: SNWSSVQLSQCHALTIFTQKCPF*STEVLP
Trigger: AGGAAGAACTTCAGTGGACAAGAAAGGACATTTCTG...GGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CAA 90 bp AGATTCTTTGGGGCTCTAACTAGTCTAAGAGATTTGCTTGAAACTCTACTCCCTCAGAAATGTCCTTTCTaGTCCACTGAAGTTCTTCCT +
Preference number: 5 (lower is better)
Translates to: RFFGALTSLRDLLETLLPQKCPF*STEVLP
Trigger: AGGAAGAACTTCAGTGGACAAGAAAGGACATTTCTG...AGGGAGTAGAGTTTCAAGCAAATCTCTTAGACTAGTTAGAGCCCCAAAGAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434998.5
ENST00000444724.5
CDS-3UTR CAA 90 bp AGATTCTTTGGGGCTCTAACTAGTCTAAGAGATTTGCTTGAAACTCTACTCCCTCTTGAGCACTGGTTTTaGACTCTTCACCGTCATTAT +
Preference number: 5 (lower is better)
Translates to: RFFGALTSLRDLLETLLPLEHWF*TLHRHY
Trigger: ATAATGACGGTGAAGAGTCAAAAACCAGTGCTCAAG...AGGGAGTAGAGTTTCAAGCAAATCTCTTAGACTAGTTAGAGCCCCAAAGAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444724.5
CDS-3UTR CAA 90 bp CAACTAACCCAGTGTCTGAGAATACTGTATATAACATACCTAATGCTTGAGAACCTGAGGTATAATCACTaGTGCCATTCCTGTCTGGGT +
Preference number: 5 (lower is better)
Translates to: QLTQCLRILYITYLMLENLRYNH*CHSCLG
Trigger: ACCCAGACAGGAATGGCACAAGTGATTATACCTCAG...GTTCTCAAGCATTAGGTATGTTATATACAGTATTCTCAGACACTGGGTTAGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434998.5
ENST00000444724.5
CDS-3UTR CAA 90 bp CTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTATCCACTCTTACAGTaGGTAAGTTTCTGTTACTGG +
Preference number: 5 (lower is better)
Translates to: LVFSPIISMPRFDYIHLPYPLLQ*VSFCYW
Trigger: CCAGTAACAGAAACTTACCAACTGTAAGAGTGGATA...AGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CAA 90 bp CCTGAAACCAAGTCAATTAAGAATGGGAGGCTGGACTTAGAAAAGCCAAAAGTGTATCCACTCTTACAGTaGGTAAGTTTCTGTTACTGG +
Preference number: 5 (lower is better)
Translates to: PETKSIKNGRLDLEKPKVYPLLQ*VSFCYW
Trigger: CCAGTAACAGAAACTTACCAACTGTAAGAGTGGATA...CACTTTTGGCTTTTCTAAGTCCAGCCTCCCATTCTTAATTGACTTGGTTTCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000438828.4
CDS-3UTR CAA 90 bp ACCCAGGTTATGTGCGTAAACATCATGTTACATTGCTTCCAAAAGTATCAATTACCGGTCACTGACTTTTaGGGCAATGGGAAGGATGTT +
Preference number: 5 (lower is better)
Translates to: TQVMCVNIMLHCFQKYQLPVTDF*GNGKDV
Trigger: AACATCCTTCCCATTGCCCAAAAAGTCAGTGACCGG...TAATTGATACTTTTGGAAGCAATGTAACATGATGTTTACGCACATAACCTGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422368.5
CDS-3UTR CAA 90 bp AAACTCTACTCCCTTAGTAAACAACTAACCCAGTGTCTGAGAATACTGTATATACCGGTCACTGACTTTTaGGGCAATGGGAAGGATGTT +
Preference number: 5 (lower is better)
Translates to: KLYSLSKQLTQCLRILYIPVTDF*GNGKDV
Trigger: AACATCCTTCCCATTGCCCAAAAAGTCAGTGACCGG...TATATACAGTATTCTCAGACACTGGGTTAGTTGTTTACTAAGGGAGTAGAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434998.5
ENST00000444724.5
CDS-3UTR CAA 90 bp TCTTGTAAAGATGAAATGGGCATAATTCACAACCAGCAATTCTACTTTAAGGCACCGGTCACTGACTTTTaGGGCAATGGGAAGGATGTT +
Preference number: 5 (lower is better)
Translates to: SCKDEMGIIHNQQFYFKAPVTDF*GNGKDV
Trigger: AACATCCTTCCCATTGCCCAAAAAGTCAGTGACCGG...TGCCTTAAAGTAGAATTGCTGGTTGTGAATTATGCCCATTTCATCTTTACAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444724.5
CDS-3UTR CAA 90 bp CTATACCCAGGTTATGTGCGTAAACATCATGTTACATTGCTTCCAAAAGTATCAGGAAACCTTTTCTTCTaGGCCCATACTGACACTCCA +
Preference number: 5 (lower is better)
Translates to: LYPGYVRKHHVTLLPKVSGNLFF*AHTDTP
Trigger: TGGAGTGTCAGTATGGGCCAAGAAGAAAAGGTTTCC...TGATACTTTTGGAAGCAATGTAACATGATGTTTACGCACATAACCTGGGTATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422368.5
CDS-3UTR CAA 90 bp CAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTAAGACATCAGGAAACCTTTTCTTCTaGGCCCATACTGACACTCCA +
Preference number: 5 (lower is better)
Translates to: QLSQCHALTIFTFLSKTSGNLFF*AHTDTP
Trigger: TGGAGTGTCAGTATGGGCCAAGAAGAAAAGGTTTCC...TGATGTCTTAGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CAA 90 bp TTTAATGTAAATCCGAGCTGGACAAGTGGCTTTGTAGAGCTGACAAGACCTGCTATTTTCTTGTCAATTTaGGGGTCTGTAGGAACTCTA +
Preference number: 5 (lower is better)
Translates to: FNVNPSWTSGFVELTRPAIFLSI*GSVGTL
Trigger: TAGAGTTCCTACAGACCCCAAAATTGACAAGAAAAT...AGCAGGTCTTGTCAGCTCTACAAAGCCACTTGTCCAGCTCGGATTTACATTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457031.5
CDS-3UTR CAA 90 bp TCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCACTGTCTGTAGTCCATaGAAGCGTTGCTGGAATAAT +
Preference number: 5 (lower is better)
Translates to: SNWSSVQLSQCHALTIFTTVCSP*KRCWNN
Trigger: ATTATTCCAGCAACGCTTCAATGGACTACAGACAGT...GGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CAA 90 bp TCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCACTGTCATGGTCTCTTaGAGAATATTCCCACTGTCT +
Preference number: 5 (lower is better)
Translates to: SNWSSVQLSQCHALTIFTTVMVS*RIFPLS
Trigger: AGACAGTGGGAATATTCTCAAAGAGACCATGACAGT...GGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CAA 90 bp TCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTAAGACATCAGAAGTCTTACAGCACTTCCTATaGTATCCAGAAGTCCTGAAG +
Preference number: 5 (lower is better)
Translates to: SQCHALTIFTFLSKTSEVLQHFL*YPEVLK
Trigger: CTTCAGGACTTCTGGATACAATAGGAAGTGCTGTAA...GACTTCTGATGTCTTAGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CAA 90 bp GTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTAAGACACTACCAGCTCGTCCATaGCAACTAGATTTTGATCTG +
Preference number: 5 (lower is better)
Translates to: VQLSQCHALTIFTFLSKTLPARP*QLDFDL
Trigger: CAGATCAAAATCTAGTTGCAATGGACGAGCTGGTAG...TGTCTTAGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CAA 90 bp TCATCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCCTACCAGCTCGTCCATaGCAACTAGATTTTGATCTG +
Preference number: 5 (lower is better)
Translates to: SSNWSSVQLSQCHALTIFLPARP*QLDFDL
Trigger: CAGATCAAAATCTAGTTGCAATGGACGAGCTGGTAG...GAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CAA 90 bp TCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTAAGACATCAGAAGTCGGGTTCTTGTTTAACTaGGCTCACAGAAATGGTACT +
Preference number: 5 (lower is better)
Translates to: SQCHALTIFTFLSKTSEVGFLFN*AHRNGT
Trigger: AGTACCATTTCTGTGAGCCAAGTTAAACAAGAACCC...GACTTCTGATGTCTTAGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CAA 90 bp GTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCGGGTTCTTGTTTAACTaGGCTCACAGAAATGGTACT +
Preference number: 5 (lower is better)
Translates to: VFSPIISMPRFDYIHLPFGFLFN*AHRNGT
Trigger: AGTACCATTTCTGTGAGCCAAGTTAAACAAGAACCC...GAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CAA 90 bp TCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTGGTTCTTTGGGTTCTaGTTTAACTTGGCTCACAGA +
Preference number: 5 (lower is better)
Translates to: SNWSSVQLSQCHALTIFTWFFGF*FNLAHR
Trigger: TCTGTGAGCCAAGTTAAACAAGAACCCAAAGAACCA...GGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CAA 90 bp TGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTGGTTCTTTGGGTTCTaGTTTAACTTGGCTCACAGA +
Preference number: 5 (lower is better)
Translates to: WSSVQLSQCHALTIFTFLWFFGF*FNLAHR
Trigger: TCTGTGAGCCAAGTTAAACAAGAACCCAAAGAACCA...AAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CAA 90 bp TCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCGACAATGCTGGTTCTTaGGGTTCTTGTTTAACTTGG +
Preference number: 5 (lower is better)
Translates to: SNWSSVQLSQCHALTIFTDNAGS*GSCLTW
Trigger: CCAAGTTAAACAAGAACCCAAAGAACCAGCATTGTC...GGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CAA 90 bp TCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTAAGACATCAGAAGTCGACAATGCTGGTTCTTaGGGTTCTTGTTTAACTTGG +
Preference number: 5 (lower is better)
Translates to: SQCHALTIFTFLSKTSEVDNAGS*GSCLTW
Trigger: CCAAGTTAAACAAGAACCCAAAGAACCAGCATTGTC...GACTTCTGATGTCTTAGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CAA 90 bp GTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTCTCAATGCCACGCTTaGACTATATTCACCTTCCTT +
Preference number: 5 (lower is better)
Translates to: VFSPIISMPRFDYIHLPFSQCHA*TIFTFL
Trigger: AAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGA...GAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CAA 90 bp CAACTAACCCAGTGTCTGAGAATACTGTATATAACATACCTAATGCTTGAGAACGGCAACGATCATCATTaGTGCATTGGATTCCCCCAA +
Preference number: 5 (lower is better)
Translates to: QLTQCLRILYITYLMLENGNDHH*CIGFPQ
Trigger: TTGGGGGAATCCAATGCACAAATGATGATCGTTGCC...GTTCTCAAGCATTAGGTATGTTATATACAGTATTCTCAGACACTGGGTTAGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444724.5
CDS-3UTR CAA 90 bp TCTTGTAAAGATGAAATGGGCATAATTCACAACCAGCAATTCTACTTTAAGGCACCTGTCCATTTTCTGTaGGGCTGGCAACGATCATCA +
Preference number: 5 (lower is better)
Translates to: SCKDEMGIIHNQQFYFKAPVHFL*GWQRSS
Trigger: TGATGATCGTTGCCAGCCCAACAGAAAATGGACAGG...TGCCTTAAAGTAGAATTGCTGGTTGTGAATTATGCCCATTTCATCTTTACAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444724.5
CDS GCA 90 bp TCATTTTGTCCAAAGGAAGAATCCCTGGAGTCCATACAGATTAGATaGTCACACCAGATAGCAAATCAACTTGAAATGGATCACAGACTA +
Preference number: 5 (lower is better)
Translates to: SFCPKEESLESIQIR*SHQIANQLEMDHRL
Trigger: TAGTCTGTGATCCATTTCAAGTTGATTTGCTATCTGGTGTGAGCATCTAATCTGTATGGACTCCAGGGATTCTTCCTTTGGACAAAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431787.5
ENST00000445120.5
CDS-3UTR CAA 90 bp CTCATCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCTGAAGTTCTTCCTTTaGGGGGCACTAAATCATGAT +
Preference number: 5 (lower is better)
Translates to: LIKLVFSPIISMPRFDYILKFFL*GALNHD
Trigger: ATCATGATTTAGTGCCCCCAAAAGGAAGAACTTCAG...AATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGATGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CAA 90 bp GTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTAAGACACTGAAGTTCTTCCTTTaGGGGGCACTAAATCATGAT +
Preference number: 5 (lower is better)
Translates to: VQLSQCHALTIFTFLSKTLKFFL*GALNHD
Trigger: ATCATGATTTAGTGCCCCCAAAAGGAAGAACTTCAG...TGTCTTAGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CAA 90 bp ACAAATTTTCTAGTAAATAAGAGAGCTTGGGCCTATACCCAGGTTATGTGCGTACAGAAATGTCCTTTCTaGTCCACTGAAGTTCTTCCT +
Preference number: 5 (lower is better)
Translates to: TNFLVNKRAWAYTQVMCVQKCPF*STEVLP
Trigger: AGGAAGAACTTCAGTGGACAAGAAAGGACATTTCTG...TACGCACATAACCTGGGTATAGGCCCAAGCTCTCTTATTTACTAGAAAATTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422368.5
CDS-3UTR CAA 90 bp AGGAAACTTCTGTACCTTTTTAATGTAAATCCGAGCTGGACAAGTGGCTTTGTACAGAAATGTCCTTTCTaGTCCACTGAAGTTCTTCCT +
Preference number: 5 (lower is better)
Translates to: RKLLYLFNVNPSWTSGFVQKCPF*STEVLP
Trigger: AGGAAGAACTTCAGTGGACAAGAAAGGACATTTCTG...TACAAAGCCACTTGTCCAGCTCGGATTTACATTAAAAAGGTACAGAAGTTTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457031.5
CDS-3UTR CAA 90 bp CTCATCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCTTGAGCACTGGTTTTaGACTCTTCACCGTCATTAT +
Preference number: 5 (lower is better)
Translates to: LIKLVFSPIISMPRFDYILEHWF*TLHRHY
Trigger: ATAATGACGGTGAAGAGTCAAAAACCAGTGCTCAAG...AATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGATGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CAA 90 bp TTCTCATCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATACTTGAGCACTGGTTTTaGACTCTTCACCGTCATTAT +
Preference number: 5 (lower is better)
Translates to: FSSNWSSVQLSQCHALTILEHWF*TLHRHY
Trigger: ATAATGACGGTGAAGAGTCAAAAACCAGTGCTCAAG...TATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGATGAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CAA 90 bp AAACTCTACTCCCTTAGTAAACAACTAACCCAGTGTCTGAGAATACTGTATATACTGAGGTATAATCACTaGTGCCATTCCTGTCTGGGT +
Preference number: 5 (lower is better)
Translates to: KLYSLSKQLTQCLRILYILRYNH*CHSCLG
Trigger: ACCCAGACAGGAATGGCACAAGTGATTATACCTCAG...TATATACAGTATTCTCAGACACTGGGTTAGTTGTTTACTAAGGGAGTAGAGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434998.5
ENST00000444724.5
CDS-3UTR CAA 90 bp AGATTCTTTGGGGCTCTAACTAGTCTAAGAGATTTGCTTGAAACTCTACTCCCTTATCCACTCTTACAGTaGGTAAGTTTCTGTTACTGG +
Preference number: 5 (lower is better)
Translates to: RFFGALTSLRDLLETLLPYPLLQ*VSFCYW
Trigger: CCAGTAACAGAAACTTACCAACTGTAAGAGTGGATA...AGGGAGTAGAGTTTCAAGCAAATCTCTTAGACTAGTTAGAGCCCCAAAGAATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434998.5
ENST00000444724.5
CDS-3UTR CAA 90 bp TTCTCATCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATAACTGTCTGTAGTCCATaGAAGCGTTGCTGGAATAAT +
Preference number: 5 (lower is better)
Translates to: FSSNWSSVQLSQCHALTITVCSP*KRCWNN
Trigger: ATTATTCCAGCAACGCTTCAATGGACTACAGACAGT...TATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGATGAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CAA 90 bp CTCATCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTACTGTCTGTAGTCCATaGAAGCGTTGCTGGAATAAT +
Preference number: 5 (lower is better)
Translates to: LIKLVFSPIISMPRFDYITVCSP*KRCWNN
Trigger: ATTATTCCAGCAACGCTTCAATGGACTACAGACAGT...AATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGATGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CAA 90 bp CTCATCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTACTGTCATGGTCTCTTaGAGAATATTCCCACTGTCT +
Preference number: 5 (lower is better)
Translates to: LIKLVFSPIISMPRFDYITVMVS*RIFPLS
Trigger: AGACAGTGGGAATATTCTCAAAGAGACCATGACAGT...AATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGATGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CAA 90 bp TTCTCATCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATAACTGTCATGGTCTCTTaGAGAATATTCCCACTGTCT +
Preference number: 5 (lower is better)
Translates to: FSSNWSSVQLSQCHALTITVMVS*RIFPLS
Trigger: AGACAGTGGGAATATTCTCAAAGAGACCATGACAGT...TATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGATGAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CAA 90 bp GTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTAAGACATTACAGCACTTCCTATaGTATCCAGAAGTCCTGAAG +
Preference number: 5 (lower is better)
Translates to: VQLSQCHALTIFTFLSKTLQHFL*YPEVLK
Trigger: CTTCAGGACTTCTGGATACAATAGGAAGTGCTGTAA...TGTCTTAGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CAA 90 bp CTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTATAAGAGCTGAGTGGTaGTCTATAATCTGTATTGGA +
Preference number: 5 (lower is better)
Translates to: LVFSPIISMPRFDYIHLPIRAEW*SIICIG
Trigger: TCCAATACAGATTATAGACAACCACTCAGCTCTTAT...AGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CAA 90 bp TTCTCATCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATAGGGTTCTTGTTTAACTaGGCTCACAGAAATGGTACT +
Preference number: 5 (lower is better)
Translates to: FSSNWSSVQLSQCHALTIGFLFN*AHRNGT
Trigger: AGTACCATTTCTGTGAGCCAAGTTAAACAAGAACCC...TATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGATGAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CAA 90 bp CTCATCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTGGGTTCTTGTTTAACTaGGCTCACAGAAATGGTACT +
Preference number: 5 (lower is better)
Translates to: LIKLVFSPIISMPRFDYIGFLFN*AHRNGT
Trigger: AGTACCATTTCTGTGAGCCAAGTTAAACAAGAACCC...AATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGATGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CAA 90 bp TCATCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCTGGTTCTTTGGGTTCTaGTTTAACTTGGCTCACAGA +
Preference number: 5 (lower is better)
Translates to: SSNWSSVQLSQCHALTIFWFFGF*FNLAHR
Trigger: TCTGTGAGCCAAGTTAAACAAGAACCCAAAGAACCA...GAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CAA 90 bp CTCATCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTGACAATGCTGGTTCTTaGGGTTCTTGTTTAACTTGG +
Preference number: 5 (lower is better)
Translates to: LIKLVFSPIISMPRFDYIDNAGS*GSCLTW
Trigger: CCAAGTTAAACAAGAACCCAAAGAACCAGCATTGTC...AATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGATGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CAA 90 bp TCATCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCTCTCAATGCCACGCTTaGACTATATTCACCTTCCTT +
Preference number: 5 (lower is better)
Translates to: SSNWSSVQLSQCHALTIFSQCHA*TIFTFL
Trigger: AAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGA...GAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CAA 90 bp TCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTTCTCAATGCCACGCTTaGACTATATTCACCTTCCTT +
Preference number: 5 (lower is better)
Translates to: SSVQLSQCHALTIFTFLSSQCHA*TIFTFL
Trigger: AAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGA...AGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CAA 90 bp CTCATCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTTCTCAATGCCACGCTTaGACTATATTCACCTTCCTT +
Preference number: 5 (lower is better)
Translates to: LIKLVFSPIISMPRFDYISQCHA*TIFTFL
Trigger: AAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGA...AATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGATGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CAA 90 bp CTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTCCATGCTACATATGTaGATTTCTGTTGCTTATCTG +
Preference number: 5 (lower is better)
Translates to: LVFSPIISMPRFDYIHLPSMLHM*ISVAYL
Trigger: CAGATAAGCAACAGAAATCAACATATGTAGCATGGA...AGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000438828.4
CDS-3UTR CAA 90 bp CTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTGTTTGTGGGAAAGTaGCTCTGTAACTTTCTGATT +
Preference number: 5 (lower is better)
Translates to: LVFSPIISMPRFDYIHLPLFVGK*LCNFLI
Trigger: AATCAGAAAGTTACAGAGCAACTTTCCCACAAACAA...AGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000438828.4
CDS-3UTR CAA 90 bp CCTGAAACCAAGTCAATTAAGAATGGGAGGCTGGACTTAGAAAAGCCAAAAGTGTTGTTTGTGGGAAAGTaGCTCTGTAACTTTCTGATT +
Preference number: 5 (lower is better)
Translates to: PETKSIKNGRLDLEKPKVLFVGK*LCNFLI
Trigger: AATCAGAAAGTTACAGAGCAACTTTCCCACAAACAA...CACTTTTGGCTTTTCTAAGTCCAGCCTCCCATTCTTAATTGACTTGGTTTCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000438828.4
CDS-3UTR CAA 90 bp CCTGAAACCAAGTCAATTAAGAATGGGAGGCTGGACTTAGAAAAGCCAAAAGTGGTTTTATTGGTTTGTTaGTGGGAAAGTTGCTCTGTA +
Preference number: 5 (lower is better)
Translates to: PETKSIKNGRLDLEKPKVVLLVC*WESCSV
Trigger: TACAGAGCAACTTTCCCACAAACAAACCAATAAAAC...CACTTTTGGCTTTTCTAAGTCCAGCCTCCCATTCTTAATTGACTTGGTTTCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000438828.4
CDS-3UTR CAA 90 bp ACCCAGGTTATGTGCGTAAACATCATGTTACATTGCTTCCAAAAGTATCAATTAGGCAACGATCATCATTaGTGCATTGGATTCCCCCAA +
Preference number: 5 (lower is better)
Translates to: TQVMCVNIMLHCFQKYQLGNDHH*CIGFPQ
Trigger: TTGGGGGAATCCAATGCACAAATGATGATCGTTGCC...TAATTGATACTTTTGGAAGCAATGTAACATGATGTTTACGCACATAACCTGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422368.5
CDS-3UTR CAA 90 bp CAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTAAGACATCACTTGAGCACTGGTTTTaGACTCTTCACCGTCATTAT +
Preference number: 5 (lower is better)
Translates to: QLSQCHALTIFTFLSKTSLEHWF*TLHRHY
Trigger: ATAATGACGGTGAAGAGTCAAAAACCAGTGCTCAAG...TGATGTCTTAGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CAA 90 bp TTCTCATCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATATCCACTCTTACAGTaGGTAAGTTTCTGTTACTGG +
Preference number: 5 (lower is better)
Translates to: FSSNWSSVQLSQCHALTIYPLLQ*VSFCYW
Trigger: CCAGTAACAGAAACTTACCAACTGTAAGAGTGGATA...TATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGATGAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CAA 90 bp GTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTAAGACATATCCACTCTTACAGTaGGTAAGTTTCTGTTACTGG +
Preference number: 5 (lower is better)
Translates to: VQLSQCHALTIFTFLSKTYPLLQ*VSFCYW
Trigger: CCAGTAACAGAAACTTACCAACTGTAAGAGTGGATA...TGTCTTAGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CAA 90 bp TCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCCAATGGGAAGGATGTTaGAGGATGAAGAATGTAATT +
Preference number: 5 (lower is better)
Translates to: SNWSSVQLSQCHALTIFTQWEGC*RMKNVI
Trigger: AATTACATTCTTCATCCTCAAACATCCTTCCCATTG...GGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CAA 90 bp TCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTAAGACATCAGAAGTCATTTTCTTGTCAATTTaGGGGTCTGTAGGAACTCTA +
Preference number: 5 (lower is better)
Translates to: SQCHALTIFTFLSKTSEVIFLSI*GSVGTL
Trigger: TAGAGTTCCTACAGACCCCAAAATTGACAAGAAAAT...GACTTCTGATGTCTTAGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CAA 90 bp CAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTAAGACATCATTACAGCACTTCCTATaGTATCCAGAAGTCCTGAAG +
Preference number: 5 (lower is better)
Translates to: QLSQCHALTIFTFLSKTSLQHFL*YPEVLK
Trigger: CTTCAGGACTTCTGGATACAATAGGAAGTGCTGTAA...TGATGTCTTAGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CAA 90 bp TCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCATAAGAGCTGAGTGGTaGTCTATAATCTGTATTGGA +
Preference number: 5 (lower is better)
Translates to: SNWSSVQLSQCHALTIFTIRAEW*SIICIG
Trigger: TCCAATACAGATTATAGACAACCACTCAGCTCTTAT...GGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CAA 90 bp TGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTGTAGCTGCTGGACTTaGTGTTATGATGTAAAATCT +
Preference number: 5 (lower is better)
Translates to: WSSVQLSQCHALTIFTFLCSCWT*CYDVKS
Trigger: AGATTTTACATCATAACACAAAGTCCAGCAGCTACA...AAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000438828.4
CDS-3UTR CAA 90 bp GTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTGTAGCTGCTGGACTTaGTGTTATGATGTAAAATCT +
Preference number: 5 (lower is better)
Translates to: VFSPIISMPRFDYIHLPFCSCWT*CYDVKS
Trigger: AGATTTTACATCATAACACAAAGTCCAGCAGCTACA...GAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000438828.4
CDS-3UTR CAA 90 bp GTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCGTTTTATTGGTTTGTTaGTGGGAAAGTTGCTCTGTA +
Preference number: 5 (lower is better)
Translates to: VFSPIISMPRFDYIHLPFVLLVC*WESCSV
Trigger: TACAGAGCAACTTTCCCACAAACAAACCAATAAAAC...GAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000438828.4
CDS-3UTR CAA 90 bp ACAAATTTTCTAGTAAATAAGAGAGCTTGGGCCTATACCCAGGTTATGTGCGTATGTAGGAGAATCATTTaGTCCAAAGGAAGAATCCCT +
Preference number: 5 (lower is better)
Translates to: TNFLVNKRAWAYTQVMCVCRRII*SKGRIP
Trigger: AGGGATTCTTCCTTTGGACAAAATGATTCTCCTACA...TACGCACATAACCTGGGTATAGGCCCAAGCTCTCTTATTTACTAGAAAATTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422368.5
CDS-3UTR CAA 90 bp TATACCCAGGTTATGTGCGTAAACATCATGTTACATTGCTTCCAAAAGTATCAACTGAAGTTCTTCCTTTaGGGGGCACTAAATCATGAT +
Preference number: 5 (lower is better)
Translates to: YTQVMCVNIMLHCFQKYQLKFFL*GALNHD
Trigger: ATCATGATTTAGTGCCCCCAAAAGGAAGAACTTCAG...TTGATACTTTTGGAAGCAATGTAACATGATGTTTACGCACATAACCTGGGTATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422368.5
CDS-3UTR CAA 90 bp GTTCAGACTATATTACTGTGGATAAATTCAGAACAGCTTTTGAAATACTGGCCTCTGAAGTTCTTCCTTTaGGGGGCACTAAATCATGAT +
Preference number: 5 (lower is better)
Translates to: VQTILLWINSEQLLKYWPLKFFL*GALNHD
Trigger: ATCATGATTTAGTGCCCCCAAAAGGAAGAACTTCAG...AGGCCAGTATTTCAAAAGCTGTTCTGAATTTATCCACAGTAATATAGTCTGAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CAA 90 bp AAACTCTACTCCCTTAGTAAACAACTAACCCAGTGTCTGAGAATACTGTATATACAGAAATGTCCTTTCTaGTCCACTGAAGTTCTTCCT +
Preference number: 5 (lower is better)
Translates to: KLYSLSKQLTQCLRILYIQKCPF*STEVLP
Trigger: AGGAAGAACTTCAGTGGACAAGAAAGGACATTTCTG...TATATACAGTATTCTCAGACACTGGGTTAGTTGTTTACTAAGGGAGTAGAGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434998.5
ENST00000444724.5
CDS-3UTR CAA 90 bp CTATACCCAGGTTATGTGCGTAAACATCATGTTACATTGCTTCCAAAAGTATCATATCCACTCTTACAGTaGGTAAGTTTCTGTTACTGG +
Preference number: 5 (lower is better)
Translates to: LYPGYVRKHHVTLLPKVSYPLLQ*VSFCYW
Trigger: CCAGTAACAGAAACTTACCAACTGTAAGAGTGGATA...TGATACTTTTGGAAGCAATGTAACATGATGTTTACGCACATAACCTGGGTATAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422368.5
CDS-3UTR CAA 90 bp CAACTAACCCAGTGTCTGAGAATACTGTATATAACATACCTAATGCTTGAGAACTATCCACTCTTACAGTaGGTAAGTTTCTGTTACTGG +
Preference number: 5 (lower is better)
Translates to: QLTQCLRILYITYLMLENYPLLQ*VSFCYW
Trigger: CCAGTAACAGAAACTTACCAACTGTAAGAGTGGATA...GTTCTCAAGCATTAGGTATGTTATATACAGTATTCTCAGACACTGGGTTAGTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434998.5
ENST00000444724.5
CDS-3UTR CAA 90 bp GTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTAAGACACAATGGGAAGGATGTTaGAGGATGAAGAATGTAATT +
Preference number: 5 (lower is better)
Translates to: VQLSQCHALTIFTFLSKTQWEGC*RMKNVI
Trigger: AATTACATTCTTCATCCTCAAACATCCTTCCCATTG...TGTCTTAGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CAA 90 bp TTCTCATCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATACAATGGGAAGGATGTTaGAGGATGAAGAATGTAATT +
Preference number: 5 (lower is better)
Translates to: FSSNWSSVQLSQCHALTIQWEGC*RMKNVI
Trigger: AATTACATTCTTCATCCTCAAACATCCTTCCCATTG...TATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGATGAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CAA 90 bp CTCATCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTATTTTCTTGTCAATTTaGGGGTCTGTAGGAACTCTA +
Preference number: 5 (lower is better)
Translates to: LIKLVFSPIISMPRFDYIIFLSI*GSVGTL
Trigger: TAGAGTTCCTACAGACCCCAAAATTGACAAGAAAAT...AATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGATGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CAA 90 bp TCATCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATTCATAAGAGCTGAGTGGTaGTCTATAATCTGTATTGGA +
Preference number: 5 (lower is better)
Translates to: SSNWSSVQLSQCHALTIFIRAEW*SIICIG
Trigger: TCCAATACAGATTATAGACAACCACTCAGCTCTTAT...GAATATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGATGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CAA 90 bp GTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTAAGACAATAAGAGCTGAGTGGTaGTCTATAATCTGTATTGGA +
Preference number: 5 (lower is better)
Translates to: VQLSQCHALTIFTFLSKTIRAEW*SIICIG
Trigger: TCCAATACAGATTATAGACAACCACTCAGCTCTTAT...TGTCTTAGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CAA 90 bp GTTCAGACTATATTACTGTGGATAAATTCAGAACAGCTTTTGAAATACTGGCCTGACAATGCTGGTTCTTaGGGTTCTTGTTTAACTTGG +
Preference number: 5 (lower is better)
Translates to: VQTILLWINSEQLLKYWPDNAGS*GSCLTW
Trigger: CCAAGTTAAACAAGAACCCAAAGAACCAGCATTGTC...AGGCCAGTATTTCAAAAGCTGTTCTGAATTTATCCACAGTAATATAGTCTGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CAA 90 bp TTCTCATCAAACTGGTCTTCAGTCCAATTATCTCAATGCCACGCTTTGACTATATCCATGCTACATATGTaGATTTCTGTTGCTTATCTG +
Preference number: 5 (lower is better)
Translates to: FSSNWSSVQLSQCHALTISMLHM*ISVAYL
Trigger: CAGATAAGCAACAGAAATCAACATATGTAGCATGGA...TATAGTCAAAGCGTGGCATTGAGATAATTGGACTGAAGACCAGTTTGATGAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000438828.4
CDS-3UTR CAA 90 bp GTCCAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTAAGACAGTTTTATTGGTTTGTTaGTGGGAAAGTTGCTCTGTA +
Preference number: 5 (lower is better)
Translates to: VQLSQCHALTIFTFLSKTVLLVC*WESCSV
Trigger: TACAGAGCAACTTTCCCACAAACAAACCAATAAAAC...TGTCTTAGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTGGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000438828.4
CDS-3UTR CAA 90 bp CAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTAAGACATCATGTAGGAGAATCATTTaGTCCAAAGGAAGAATCCCT +
Preference number: 5 (lower is better)
Translates to: QLSQCHALTIFTFLSKTSCRRII*SKGRIP
Trigger: AGGGATTCTTCCTTTGGACAAAATGATTCTCCTACA...TGATGTCTTAGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402905.7
ENST00000438828.4
CDS-3UTR CAA 90 bp CAACTAACCCAGTGTCTGAGAATACTGTATATAACATACCTAATGCTTGAGAACACTAGTCTAAGAGATTaGCTTGAAACTCTACTCCCT +
Preference number: 5 (lower is better)
Translates to: QLTQCLRILYITYLMLENTSLRD*LETLLP
Trigger: AGGGAGTAGAGTTTCAAGCAAATCTCTTAGACTAGT...GTTCTCAAGCATTAGGTATGTTATATACAGTATTCTCAGACACTGGGTTAGTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434998.5
ENST00000444724.5
CDS-3UTR CAA 90 bp CAATTATCTCAATGCCACGCTTTGACTATATTCACCTTCCTTTCTAAGACATCAATTTTCTTGTCAATTTaGGGGTCTGTAGGAACTCTA +
Preference number: 5 (lower is better)
Translates to: QLSQCHALTIFTFLSKTSIFLSI*GSVGTL
Trigger: TAGAGTTCCTACAGACCCCAAAATTGACAAGAAAAT...TGATGTCTTAGAAAGGAAGGTGAATATAGTCAAAGCGTGGCATTGAGATAATTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000428585.5
ENST00000438828.4
CDS-3UTR CAA 90 bp TCTTGTAAAGATGAAATGGGCATAATTCACAACCAGCAATTCTACTTTAAGGCATGTAGGAGAATCATTTaGTCCAAAGGAAGAATCCCT +
Preference number: 5 (lower is better)
Translates to: SCKDEMGIIHNQQFYFKACRRII*SKGRIP
Trigger: AGGGATTCTTCCTTTGGACAAAATGATTCTCCTACA...TGCCTTAAAGTAGAATTGCTGGTTGTGAATTATGCCCATTTCATCTTTACAAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444724.5
CDS-3UTR CAA 90 bp AAACTCTACTCCCTTAGTAAACAACTAACCCAGTGTCTGAGAATACTGTATATAACTAGTCTAAGAGATTaGCTTGAAACTCTACTCCCT +
Preference number: 5 (lower is better)
Translates to: KLYSLSKQLTQCLRILYITSLRD*LETLLP
Trigger: AGGGAGTAGAGTTTCAAGCAAATCTCTTAGACTAGT...TATATACAGTATTCTCAGACACTGGGTTAGTTGTTTACTAAGGGAGTAGAGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434998.5
ENST00000444724.5
CDS-3UTR CAA 90 bp TATACCCAGGTTATGTGCGTAAACATCATGTTACATTGCTTCCAAAAGTATCAACAATGGGAAGGATGTTaGAGGATGAAGAATGTAATT +
Preference number: 5 (lower is better)
Translates to: YTQVMCVNIMLHCFQKYQQWEGC*RMKNVI
Trigger: AATTACATTCTTCATCCTCAAACATCCTTCCCATTG...TTGATACTTTTGGAAGCAATGTAACATGATGTTTACGCACATAACCTGGGTATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422368.5
CDS-3UTR CAA 90 bp AAACTCTACTCCCTTAGTAAACAACTAACCCAGTGTCTGAGAATACTGTATATACAATGGGAAGGATGTTaGAGGATGAAGAATGTAATT +
Preference number: 5 (lower is better)
Translates to: KLYSLSKQLTQCLRILYIQWEGC*RMKNVI
Trigger: AATTACATTCTTCATCCTCAAACATCCTTCCCATTG...TATATACAGTATTCTCAGACACTGGGTTAGTTGTTTACTAAGGGAGTAGAGTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434998.5
ENST00000444724.5
CDS-3UTR CAA 90 bp TCTTGTAAAGATGAAATGGGCATAATTCACAACCAGCAATTCTACTTTAAGGCACAATGGGAAGGATGTTaGAGGATGAAGAATGTAATT +
Preference number: 5 (lower is better)
Translates to: SCKDEMGIIHNQQFYFKAQWEGC*RMKNVI
Trigger: AATTACATTCTTCATCCTCAAACATCCTTCCCATTG...TGCCTTAAAGTAGAATTGCTGGTTGTGAATTATGCCCATTTCATCTTTACAAGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444724.5
CDS-3UTR CAA 90 bp ACCCAGGTTATGTGCGTAAACATCATGTTACATTGCTTCCAAAAGTATCAATTAATTTTCTTGTCAATTTaGGGGTCTGTAGGAACTCTA +
Preference number: 5 (lower is better)
Translates to: TQVMCVNIMLHCFQKYQLIFLSI*GSVGTL
Trigger: TAGAGTTCCTACAGACCCCAAAATTGACAAGAAAAT...TAATTGATACTTTTGGAAGCAATGTAACATGATGTTTACGCACATAACCTGGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000422368.5
CDS-3UTR CAA 90 bp GTTCAGACTATATTACTGTGGATAAATTCAGAACAGCTTTTGAAATACTGGCCTTTGTTTGTGGGAAAGTaGCTCTGTAACTTTCTGATT +
Preference number: 5 (lower is better)
Translates to: VQTILLWINSEQLLKYWPLFVGK*LCNFLI
Trigger: AATCAGAAAGTTACAGAGCAACTTTCCCACAAACAA...AGGCCAGTATTTCAAAAGCTGTTCTGAATTTATCCACAGTAATATAGTCTGAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000438828.4
CDS CCA 72 bp CTGGGATTTCCACATCAAGCGTGTAGCAGGCTTGGCTaGGCTTGGAGACTGACGGGTCCCCCAAACACTCTG +
Preference number: 6 (lower is better)
Translates to: LGFPHQACSRLG*AWRLTGPPNTL
Trigger: CAGAGTGTTTGGGGGACCCGTCAGTCTCCAAGCCCAGCCAAGCCTGCTACACGCTTGATGTGGAAATCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000414439.5
ENST00000422368.5
ENST00000428585.5
ENST00000434998.5
ENST00000438828.4
ENST00000444724.5
CDS TCA 72 bp ATCAAGCGTGTAGCAGGCTTGGCTGGGCTTGGAGACTaGCGGGTCCCCCAAACACTCTGTGTTTGCTGCTTG +
Preference number: 6 (lower is better)
Translates to: IKRVAGLAGLGD*RVPQTLCVCCL
Trigger: CAAGCAGCAAACACAGAGTGTTTGGGGGACCCGTCAGTCTCCAAGCCCAGCCAAGCCTGCTACACGCTTGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000414439.5
ENST00000422368.5
ENST00000428585.5
ENST00000434998.5
ENST00000438828.4
ENST00000444724.5
CDS CCA 72 bp TTTCCACATCAAGCGTGTAGCAGGCTTGGCTGGGCTTaGAGACTGACGGGTCCCCCAAACACTCTGTGTTTG +
Preference number: 6 (lower is better)
Translates to: FPHQACSRLGWA*RLTGPPNTLCL
Trigger: CAAACACAGAGTGTTTGGGGGACCCGTCAGTCTCCAAGCCCAGCCAAGCCTGCTACACGCTTGATGTGGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000414439.5
ENST00000422368.5
ENST00000428585.5
ENST00000434998.5
ENST00000438828.4
ENST00000444724.5
CDS TCA 72 bp CGGCAGGCCCATATAGGTGTATTAGAAGAAAGTGGCTaGAGAGGCCCCAGAAGGGGTTCTTCCAGCATTCCG +
Preference number: 6 (lower is better)
Translates to: RQAHIGVLEESG*RGPRRGSSSIP
Trigger: CGGAATGCTGGAAGAACCCCTTCTGGGGCCTCTTCAGCCACTTTCTTCTAATACACCTATATGGGCCTGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000414439.5
ENST00000422368.5
ENST00000428585.5
ENST00000434998.5
ENST00000438828.4
ENST00000444724.5
ENST00000457031.5
ENST00000471271.5
CDS GCA 72 bp AGGCACGAAAACTGCTTGAATCTGGGAAGTGGAGGTTaGAGTAAGCCAAGATCGTGCCTTGGCACTCTAGCC +
Preference number: 6 (lower is better)
Translates to: RHENCLNLGSGG*SKPRSCLGTLA
Trigger: GGCTAGAGTGCCAAGGCACGATCTTGGCTTACTGCAACCTCCACTTCCCAGATTCAAGCAGTTTTCGTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414490.5
CDS CCA 72 bp AGGTGGAATTACACGAAGTACCTGTCCATTTTCTGTTaGGCTGGCAACGATCATCTTCAGATAGTGGCTCAG +
Preference number: 6 (lower is better)
Translates to: RWNYTKYLSIFC*AGNDHLQIVAQ
Trigger: CTGAGCCACTATCTGAAGATGATCGTTGCCAGCCCAACAGAAAATGGACAGGTACTTCGTGTAATTCCACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414439.5
CDS CCA 72 bp AGGTGGAATTACACGAAGTACCTGTCCATTTTCTGTTaGGCTGGCAACGATCATCTCACACCAGATAGCAAA +
Preference number: 6 (lower is better)
Translates to: RWNYTKYLSIFC*AGNDHLTPDSK
Trigger: TTTGCTATCTGGTGTGAGATGATCGTTGCCAGCCCAACAGAAAATGGACAGGTACTTCGTGTAATTCCACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434998.5
CDS TCA 72 bp ATTGGAATAGTCTGCACATCTCCCAACAGAATCCGATaGACAGTTCCTTCCAGATTCCCTGTATCCTCAACA +
Preference number: 6 (lower is better)
Translates to: IGIVCTSPNRIR*TVPSRFPVSST
Trigger: TGTTGAGGATACAGGGAATCTGGAAGGAACTGTTCATCGGATTCTGTTGGGAGATGTGCAGACTATTCCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000414439.5
ENST00000428585.5
ENST00000438828.4
CDS CCA 72 bp AGGTGGAATTACACGAAGTACCTGTCCATTTTCTGTTaGGCTGGCAACGATCATCTCAAATACTTGAGCACT +
Preference number: 6 (lower is better)
Translates to: RWNYTKYLSIFC*AGNDHLKYLST
Trigger: AGTGCTCAAGTATTTGAGATGATCGTTGCCAGCCCAACAGAAAATGGACAGGTACTTCGTGTAATTCCACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320443.12
ENST00000428585.5
ENST00000447539.5
CDS CCA 72 bp GCATTAACAAATGGGATTCCATCATATGGAACATACTaGGATTTCCACATCAAGCGTGTAGCAGGCTTGGCT +
Preference number: 6 (lower is better)
Translates to: ALTNGIPSYGTY*DFHIKRVAGLA
Trigger: AGCCAAGCCTGCTACACGCTTGATGTGGAAATCCCAGTATGTTCCATATGATGGAATCCCATTTGTTAATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000414439.5
ENST00000422368.5
ENST00000428585.5
ENST00000434998.5
ENST00000438828.4
ENST00000444724.5
CDS CCA 72 bp ATTGTATCCAGAAGTCCTGAAGGACTAGAGGACGGCTaGTTATTTACTGATACCACAGCTGGTGATTCATCA +
Preference number: 6 (lower is better)
Translates to: IVSRSPEGLEDG*LFTDTTAGDSS
Trigger: TGATGAATCACCAGCTGTGGTATCAGTAAATAACCAGCCGTCCTCTAGTCCTTCAGGACTTCTGGATACAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000414439.5
ENST00000428585.5
ENST00000438828.4
CDS CCA 72 bp GAATTACACGAAGTACCTGTCCATTTTCTGTTGGGCTaGCAACGATCATCTTCAGATAGTGGCTCAGGTTTA +
Preference number: 6 (lower is better)
Translates to: ELHEVPVHFLLG*QRSSSDSGSGL
Trigger: TAAACCTGAGCCACTATCTGAAGATGATCGTTGCCAGCCCAACAGAAAATGGACAGGTACTTCGTGTAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414439.5
CDS CCA 72 bp TCTACTCCCTGCATTAACAAATGGGATTCCATCATATaGAACATACTGGGATTTCCACATCAAGCGTGTAGC +
Preference number: 6 (lower is better)
Translates to: STPCINKWDSII*NILGFPHQACS
Trigger: GCTACACGCTTGATGTGGAAATCCCAGTATGTTCCATATGATGGAATCCCATTTGTTAATGCAGGGAGTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000414439.5
ENST00000422368.5
ENST00000428585.5
ENST00000438828.4
CDS CCA 72 bp CAACTAGATTTTGATCTGGTTCTGGAAGGTTACCCATaGTGGAGGCAGTACTATTGTTTTGGGTTAAGCATG +
Preference number: 6 (lower is better)
Translates to: QLDFDLVLEGYP*WRQYYCFGLSM
Trigger: CATGCTTAACCCAAAACAATAGTACTGCCTCCACCATGGGTAACCTTCCAGAACCAGATCAAAATCTAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000414439.5
ENST00000428585.5
ENST00000438828.4
CDS GCA 72 bp CCAAAGGAAGAATCCCTGGAGTCCATACAGATTAGATaGTCACACCAGATAGCAAATCAACTTGAAATGGAT +
Preference number: 6 (lower is better)
Translates to: PKEESLESIQIR*SHQIANQLEMD
Trigger: ATCCATTTCAAGTTGATTTGCTATCTGGTGTGAGCATCTAATCTGTATGGACTCCAGGGATTCTTCCTTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431787.5
ENST00000445120.5
CDS CAA 72 bp ACGAGTAGTGATGGGCAAAACTGTAGGAGAATCATTTaGTCCAAAGGAAGAATCCCTCAAATACTTGAGCAC +
Preference number: 6 (lower is better)
Translates to: TSSDGQNCRRII*SKGRIPQILEH
Trigger: GTGCTCAAGTATTTGAGGGATTCTTCCTTTGGACAAAATGATTCTCCTACAGTTTTGCCCATCACTACTCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427712.5
CDS CAA 90 bp ACTACCCCCAGAAATGTCCTTTCTTGTCCACTGAAGTTCTTCCTTTaGGGGGCACTAAATCATGATAGCTGTAGCTTCATTTATGTGAAA +
Preference number: 6 (lower is better)
Translates to: TTPRNVLSCPLKFFL*GALNHDSCSFIYVK
Trigger: TTTCACATAAATGAAGCTACAGCTATCATGATTTAGTGCCCCCAAAAGGAAGAACTTCAGTGGACAAGAAAGGACATTTCTGGGGGTAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 20 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000414439.5
ENST00000414490.5
ENST00000414857.5
ENST00000422368.5
ENST00000427712.5
ENST00000428585.5
ENST00000430899.5
ENST00000431787.5
ENST00000432024.5
ENST00000434998.5
ENST00000438828.4
ENST00000441569.5
ENST00000443740.5
ENST00000444724.5
ENST00000445120.5
ENST00000447539.5
ENST00000457031.5
ENST00000471271.5
CDS CCA 72 bp AAAAGTACCTGCATTAACAAATGGGATTCCATCATATaGAACATACTGGGATTTCCACATCAAGCGTGTAGC +
Preference number: 6 (lower is better)
Translates to: KSTCINKWDSII*NILGFPHQACS
Trigger: GCTACACGCTTGATGTGGAAATCCCAGTATGTTCCATATGATGGAATCCCATTTGTTAATGCAGGTACTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434998.5
ENST00000444724.5
CDS TCA 72 bp GTCTGTAGTCCATTGAAGCGTTGCTGGAATAATCTCTaGGTTATATACCGTATCTCCATTTCTCAAGGATTT +
Preference number: 6 (lower is better)
Translates to: VCSPLKRCWNNL*VIYRISISQGF
Trigger: AAATCCTTGAGAAATGGAGATACGGTATATAACTCAGAGATTATTCCAGCAACGCTTCAATGGACTACAGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000414439.5
ENST00000428585.5
ENST00000438828.4
CDS CAA 72 bp CATAGACAATGCTGGTTCTTTGGGTTCTTGTTTAACTaGGCTCACAGAAATGGTACTTTCTGGATTTTCTTC +
Preference number: 6 (lower is better)
Translates to: HRQCWFFGFLFN*AHRNGTFWIFF
Trigger: GAAGAAAATCCAGAAAGTACCATTTCTGTGAGCCAAGTTAAACAAGAACCCAAAGAACCAGCATTGTCTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000414439.5
ENST00000428585.5
ENST00000438828.4
CDS CCA 72 bp AGAAAACACAGGAGAAAATCTTTGTACCCTTGGACTTaGCAAAGATATATTAAACCTTCAGATAGTGGCTCA +
Preference number: 6 (lower is better)
Translates to: RKHRRKSLYPWT*QRYIKPSDSGS
Trigger: TGAGCCACTATCTGAAGGTTTAATATATCTTTGCCAAGTCCAAGGGTACAAAGATTTTCTCCTGTGTTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430899.5
ENST00000432024.5
ENST00000434998.5
ENST00000438828.4
ENST00000445120.5
CDS TCA 72 bp AAGATAAATTATGTCTTTCAGGTACCTCATCGGGTTTaGACAGTTCCCTTTCCACAAATTTTCTTAGCTGTT +
Preference number: 6 (lower is better)
Translates to: KINYVFQVPHRV*TVPFPQIFLAV
Trigger: AACAGCTAAGAAAATTTGTGGAAAGGGAACTGTTCAAACCCGATGAGGTACCTGAAAGACATAATTTATCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000414439.5
ENST00000428585.5
ENST00000438828.4
CDS CAA 72 bp AAAGATAAATTATGTCTTTCAGGTACCTCATCGGGTTaGAACAGTTCCCTTTCCACAAATTTTCTTAGCTGT +
Preference number: 6 (lower is better)
Translates to: KDKLCLSGTSSG*NSSLSTNFLSC
Trigger: ACAGCTAAGAAAATTTGTGGAAAGGGAACTGTTCAAACCCGATGAGGTACCTGAAAGACATAATTTATCTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000414439.5
ENST00000428585.5
ENST00000438828.4
CDS CAA 72 bp GTACTTTCTGGATTTTCTTCAATAAGAGCTGAGTGGTaGTCTATAATCTGTATTGGAATAGTCTGCACATCT +
Preference number: 6 (lower is better)
Translates to: VLSGFSSIRAEW*SIICIGIVCTS
Trigger: AGATGTGCAGACTATTCCAATACAGATTATAGACAACCACTCAGCTCTTATTGAAGAAAATCCAGAAAGTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320443.12
ENST00000402905.7
ENST00000414439.5
ENST00000428585.5
ENST00000438828.4