RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CAPZB (Homo sapiens)

Ensembl gene IDs: ENSG00000077549

Ensembl transcript IDs: ENST00000264202.8, ENST00000264203.7, ENST00000375142.5, ENST00000375144.6, ENST00000433834.5, ENST00000459967.6, ENST00000482808.2, ENST00000489607.5, ENST00000674228.1, ENST00000674278.1, ENST00000674299.1, ENST00000674390.1, ENST00000674432.1, ENST00000674449.1

Found 1847 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CGGCTCTGGGGTGTGGAGTGGTATCGCCGCTGCAGAGGTCCACGCTaGCGGTGGTCGTGGTATTCAGGGGCTCGCCACCACCACCCGCAG +
Preference number: 1 (lower is better)
Translates to: RLWGVEWYRRCRGPR*RWSWYSGARHHHPQ
Trigger: CTGCGGGTGGTGGTGGCGAGCCCCTGAATACCACGACCACCGCCAGCGTGGACCTCTGCAGCGGCGATACCACTCCACACCCCAGAGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR GCA 90 bp AGGCGGTGGAGGCCTGGGGGCCACCATGCCAGTGCCTGGCTGATTTaGTGCATGGACCCGCTTCCTGGGGTGAGGCTCTGGGTCACTGGG +
Preference number: 1 (lower is better)
Translates to: RRWRPGGHHASAWLI*CMDPLPGVRLWVTG
Trigger: CCCAGTGACCCAGAGCCTCACCCCAGGAAGCGGGTCCATGCAGCAAATCAGCCAGGCACTGGCATGGTGGCCCCCAGGCCTCCACCGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR CCA 90 bp GGACTGGTGAGGCGGTGGAGGCCTGGGGGCCACCATGCCAGTGCCTaGCTGATTTGCTGCATGGACCCGCTTCCTGGGGTGAGGCTCTGG +
Preference number: 1 (lower is better)
Translates to: GLVRRWRPGGHHASA*LICCMDPLPGVRLW
Trigger: CCAGAGCCTCACCCCAGGAAGCGGGTCCATGCAGCAAATCAGCCAGGCACTGGCATGGTGGCCCCCAGGCCTCCACCGCCTCACCAGTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR GCA 90 bp TGCTCGACTCTGTGGGAGGGAGGAGTCATCTTGAGCAGACCTGGCTaGCAGGGTTTCTACGCCAGGACGCCCCCAGTGGGCGGCCAGGGA +
Preference number: 1 (lower is better)
Translates to: CSTLWEGGVILSRPG*QGFYARTPPVGGQG
Trigger: TCCCTGGCCGCCCACTGGGGGCGTCCTGGCGTAGAAACCCTGGCAGCCAGGTCTGCTCAAGATGACTCCTCCCTCCCACAGAGTCGAGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR CCA 90 bp CGGGAGATGCGGCGGGCAAAGCAGCAGCGCACAGGACCTCTAGCCTaGGTGGTCACTGGCTCTTCTGGGAAGGAAGAGCCAAGCCCGCCA +
Preference number: 1 (lower is better)
Translates to: REMRRAKQQRTGPLA*VVTGSSGKEEPSPP
Trigger: TGGCGGGCTTGGCTCTTCCTTCCCAGAAGAGCCAGTGACCACCCAGGCTAGAGGTCCTGTGCGCTGCTGCTTTGCCCGCCGCATCTCCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR GCA 90 bp CCTTGCCAGGCCCTGTGGGGGTGGCATATGGCTTACATGGACAGGTaGTCATCTCTGCCCCTGGCCACCGGTGACCCGGCCATAGTCCCT +
Preference number: 1 (lower is better)
Translates to: PCQALWGWHMAYMDR*SSLPLATGDPAIVP
Trigger: AGGGACTATGGCCGGGTCACCGGTGGCCAGGGGCAGAGATGAGCACCTGTCCATGTAAGCCATATGCCACCCCCACAGGGCCTGGCAAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR GCA 90 bp CCTCCTGCCTCTCCTGCGGGGCCACTCTCCTCCTTCCTCCCGAGGTaGTGGGAACAGAACGGCACCAGCCTGGATCCCACTACACACTGT +
Preference number: 1 (lower is better)
Translates to: PPASPAGPLSSFLPR*WEQNGTSLDPTTHC
Trigger: ACAGTGTGTAGTGGGATCCAGGCTGGTGCCGTTCTGTTCCCAGCACCTCGGGAGGAAGGAGGAGAGTGGCCCCGCAGGAGAGGCAGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR GCA 90 bp GACAAGGCCCCAGGTGGCCTCCACACAGCCGGTGAAGGGAGCTGGTaGCTCTCAGGCCGTCCCGAGGCAGTGGAGGAAAGAGAACCACTA +
Preference number: 1 (lower is better)
Translates to: DKAPGGLHTAGEGSW*LSGRPEAVEEREPL
Trigger: TAGTGGTTCTCTTTCCTCCACTGCCTCGGGACGGCCTGAGAGGCACCAGCTCCCTTCACCGGCTGTGTGGAGGCCACCTGGGGCCTTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR CCA 90 bp CACTGCCTGGGGACTGTGCAGGTTGGCTGGGCGGGAAAGTGTGTTTaGTGTATCGGGCAGTGGCTGCCAGTGGCAGGCCTAACGCCAGGG +
Preference number: 1 (lower is better)
Translates to: HCLGTVQVGWAGKCV*CIGQWLPVAGLTPG
Trigger: CCCTGGCGTTAGGCCTGCCACTGGCAGCCACTGCCCGATACACCAAACACACTTTCCCGCCCAGCCAACCTGCACAGTCCCCAGGCAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR CCA 90 bp ACAGTGCTCGACTCTGTGGGAGGGAGGAGTCATCTTGAGCAGACCTaGCTGCCAGGGTTTCTACGCCAGGACGCCCCCAGTGGGCGGCCA +
Preference number: 1 (lower is better)
Translates to: TVLDSVGGRSHLEQT*LPGFLRQDAPSGRP
Trigger: TGGCCGCCCACTGGGGGCGTCCTGGCGTAGAAACCCTGGCAGCCAGGTCTGCTCAAGATGACTCCTCCCTCCCACAGAGTCGAGCACTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR CCA 90 bp GTAGACAAGGCCCCAGGTGGCCTCCACACAGCCGGTGAAGGGAGCTaGTGCCTCTCAGGCCGTCCCGAGGCAGTGGAGGAAAGAGAACCA +
Preference number: 1 (lower is better)
Translates to: VDKAPGGLHTAGEGS*CLSGRPEAVEEREP
Trigger: TGGTTCTCTTTCCTCCACTGCCTCGGGACGGCCTGAGAGGCACCAGCTCCCTTCACCGGCTGTGTGGAGGCCACCTGGGGCCTTGTCTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR TCA 90 bp GTCACCCCTTCCAAGCCAGCTAGCCCTGGACAGGCAATGTGCCGCTaGGCAGCGGGGAGGCTTATGTGGCTTCTGGGATCCCTGCACCAG +
Preference number: 1 (lower is better)
Translates to: VTPSKPASPGQAMCR*AAGRLMWLLGSLHQ
Trigger: CTGGTGCAGGGATCCCAGAAGCCACATAAGCCTCCCCGCTGCTCAGCGGCACATTGCCTGTCCAGGGCTAGCTGGCTTGGAAGGGGTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR TCA 90 bp GCGCTTGGAGACAGTGCTCGACTCTGTGGGAGGGAGGAGTCATCTTaGGCAGACCTGGCTGCCAGGGTTTCTACGCCAGGACGCCCCCAG +
Preference number: 1 (lower is better)
Translates to: ALGDSARLCGREESS*ADLAARVSTPGRPQ
Trigger: CTGGGGGCGTCCTGGCGTAGAAACCCTGGCAGCCAGGTCTGCTCAAGATGACTCCTCCCTCCCACAGAGTCGAGCACTGTCTCCAAGCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR GCA 90 bp ATCCCTGCCCTGGGGACAGTCAGGCCGGTGCACACAAGTGGCTGCTaGTGGAGAGGCAGCATCCGTCCCTTGGCCTGGGCTTCTTCAGAA +
Preference number: 1 (lower is better)
Translates to: IPALGTVRPVHTSGC*WRGSIRPLAWASSE
Trigger: TTCTGAAGAAGCCCAGGCCAAGGGACGGATGCTGCCTCTCCAGCAGCAGCCACTTGTGTGCACCGGCCTGACTGTCCCCAGGGCAGGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR CCA 90 bp TATCGGGCAGTGGCTGCCAGTGGCAGGCCTAACGCCAGGGACCACTaGGCTCTAACCCTGTCACAGGTCACGAAGACCAAGCCTCCCCCA +
Preference number: 1 (lower is better)
Translates to: YRAVAASGRPNARDH*ALTLSQVTKTKPPP
Trigger: TGGGGGAGGCTTGGTCTTCGTGACCTGTGACAGGGTTAGAGCCCAGTGGTCCCTGGCGTTAGGCCTGCCACTGGCAGCCACTGCCCGATA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR CCA 90 bp TCTCCCCCACTTCCCAGCCACTGCCTGGGGACTGTGCAGGTTGGCTaGGCGGGAAAGTGTGTTTGGTGTATCGGGCAGTGGCTGCCAGTG +
Preference number: 1 (lower is better)
Translates to: SPPLPSHCLGTVQVG*AGKCVWCIGQWLPV
Trigger: CACTGGCAGCCACTGCCCGATACACCAAACACACTTTCCCGCCCAGCCAACCTGCACAGTCCCCAGGCAGTGGCTGGGAAGTGGGGGAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR TCA 90 bp CTCCCTGGAGGCTGGCTGCAGCACAGTGTCCCCACGGGAGGATTCTaGGCTCCAACGTGGCAGGAGCCTGGCAGCTCTCAGTCATTCGAT +
Preference number: 1 (lower is better)
Translates to: LPGGWLQHSVPTGGF*APTWQEPGSSQSFD
Trigger: ATCGAATGACTGAGAGCTGCCAGGCTCCTGCCACGTTGGAGCTCAGAATCCTCCCGTGGGGACACTGTGCTGCAGCCAGCCTCCAGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR CCA 90 bp CGTGATAGGTGCCGTGTTACATGGGGCCGAGGCTACACGGGAATGTaGCTGTGCACCGACCGGGAGCACACGTGGGGGTTAGTGGTGGTT +
Preference number: 1 (lower is better)
Translates to: RDRCRVTWGRGYTGM*LCTDREHTWGLVVV
Trigger: AACCACCACTAACCCCCACGTGTGCTCCCGGTCGGTGCACAGCCACATTCCCGTGTAGCCTCGGCCCCATGTAACACGGCACCTATCACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR CCA 90 bp AAGGAACAGCTGCAGCTCGTTAGGGGCGGAAGGTTATGCTGGTTGTaGCCGAGTCGGCACTGGGCGTCCAGGCAGCTCCAGCAGAGCATC +
Preference number: 1 (lower is better)
Translates to: KEQLQLVRGGRLCWL*PSRHWASRQLQQSI
Trigger: GATGCTCTGCTGGAGCTGCCTGGACGCCCAGTGCCGACTCGGCCACAACCAGCATAACCTTCCGCCCCTAACGAGCTGCAGCTGTTCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR CCA 90 bp TCATGCCTCTGGTATCCCGGATGGCAGCTCCAACTGCTGTCCCTTTaGTGGTCTGCGGTCCCTGTCACCCAGGAAGAGCCTGGCCCCACT +
Preference number: 1 (lower is better)
Translates to: SCLWYPGWQLQLLSL*WSAVPVTQEEPGPT
Trigger: AGTGGGGCCAGGCTCTTCCTGGGTGACAGGGACCGCAGACCACCAAAGGGACAGCAGTTGGAGCTGCCATCCGGGATACCAGAGGCATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR TCA 90 bp CTCTTCCAACCCCCAACCACCAGGGGCGCAGGCCAAGCTCTAGCTTaGAGTGTGTGGTCTGAAAGTGGCAGCTGCACCTGTGCAGCCCTC +
Preference number: 1 (lower is better)
Translates to: LFQPPTTRGAGQALA*SVWSESGSCTCAAL
Trigger: GAGGGCTGCACAGGTGCAGCTGCCACTTTCAGACCACACACTTCAAGCTAGAGCTTGGCCTGCGCCCCTGGTGGTTGGGGGTTGGAAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR TCA 90 bp CCGACAACAAACATGCCCACAGACAGCAAGTCCAGTCTTCTGGCATaGGCCAGCAGGGTACGGCGGGGGCAGGAACAGGGGCAAGACAGG +
Preference number: 1 (lower is better)
Translates to: PTTNMPTDSKSSLLA*ASRVRRGQEQGQDR
Trigger: CCTGTCTTGCCCCTGTTCCTGCCCCCGCCGTACCCTGCTGGCTCATGCCAGAAGACTGGACTTGCTGTCTGTGGGCATGTTTGTTGTCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR CCA 90 bp CACCCAGAGTGGAAAGCACACACACGTGATAGGTGCCGTGTTACATaGGGCCGAGGCTACACGGGAATGTGGCTGTGCACCGACCGGGAG +
Preference number: 1 (lower is better)
Translates to: HPEWKAHTRDRCRVT*GRGYTGMWLCTDRE
Trigger: CTCCCGGTCGGTGCACAGCCACATTCCCGTGTAGCCTCGGCCCCATGTAACACGGCACCTATCACGTGTGTGTGCTTTCCACTCTGGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR CCA 90 bp GTCAGCCGACAACAAACATGCCCACAGACAGCAAGTCCAGTCTTCTaGCATGAGCCAGCAGGGTACGGCGGGGGCAGGAACAGGGGCAAG +
Preference number: 1 (lower is better)
Translates to: VSRQQTCPQTASPVF*HEPAGYGGGRNRGK
Trigger: CTTGCCCCTGTTCCTGCCCCCGCCGTACCCTGCTGGCTCATGCCAGAAGACTGGACTTGCTGTCTGTGGGCATGTTTGTTGTCGGCTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR GCA 90 bp ACACCCAGCCTCCACCCAGAGTGGAAAGCACACACACGTGATAGGTaGCGTGTTACATGGGGCCGAGGCTACACGGGAATGTGGCTGTGC +
Preference number: 1 (lower is better)
Translates to: TPSLHPEWKAHTRDR*RVTWGRGYTGMWLC
Trigger: GCACAGCCACATTCCCGTGTAGCCTCGGCCCCATGTAACACGGCACCTATCACGTGTGTGTGCTTTCCACTCTGGGTGGAGGCTGGGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR GCA 90 bp ACCTGTTTAAAGGAACAGCTGCAGCTCGTTAGGGGCGGAAGGTTATaGTGGTTGTGGCCGAGTCGGCACTGGGCGTCCAGGCAGCTCCAG +
Preference number: 1 (lower is better)
Translates to: TCLKEQLQLVRGGRL*WLWPSRHWASRQLQ
Trigger: CTGGAGCTGCCTGGACGCCCAGTGCCGACTCGGCCACAACCAGCATAACCTTCCGCCCCTAACGAGCTGCAGCTGTTCCTTTAAACAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR GCA 90 bp GGGAAGGTCACGGCCAAGCAACCTCGAATCAGCGCTTGGAGACAGTaGTCGACTCTGTGGGAGGGAGGAGTCATCTTGAGCAGACCTGGC +
Preference number: 1 (lower is better)
Translates to: GKVTAKQPRISAWRQ*STLWEGGVILSRPG
Trigger: GCCAGGTCTGCTCAAGATGACTCCTCCCTCCCACAGAGTCGAGCACTGTCTCCAAGCGCTGATTCGAGGTTGCTTGGCCGTGACCTTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR GCA 90 bp TGCTGGGAACAGAACGGCACCAGCCTGGATCCCACTACACACTGTTaGAGACCCTCGGGGTCTGGGTTATCCAGTTCGACCCCCAACTGG +
Preference number: 1 (lower is better)
Translates to: CWEQNGTSLDPTTHC*RPSGSGLSSSTPNW
Trigger: CCAGTTGGGGGTCGAACTGGATAACCCAGACCCCGAGGGTCTGCAACAGTGTGTAGTGGGATCCAGGCTGGTGCCGTTCTGTTCCCAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR GCA 90 bp CACACGGCCAGTGCCTGTGGGTGCTACGTCAGCCGACAACAAACATaGCCACAGACAGCAAGTCCAGTCTTCTGGCATGAGCCAGCAGGG +
Preference number: 1 (lower is better)
Translates to: HTASACGCYVSRQQT*PQTASPVFWHEPAG
Trigger: CCCTGCTGGCTCATGCCAGAAGACTGGACTTGCTGTCTGTGGGCATGTTTGTTGTCGGCTGACGTAGCACCCACAGGCACTGGCCGTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR CCA 90 bp TGTTTAAAGGAACAGCTGCAGCTCGTTAGGGGCGGAAGGTTATGCTaGTTGTGGCCGAGTCGGCACTGGGCGTCCAGGCAGCTCCAGCAG +
Preference number: 1 (lower is better)
Translates to: CLKEQLQLVRGGRLC*LWPSRHWASRQLQQ
Trigger: CTGCTGGAGCTGCCTGGACGCCCAGTGCCGACTCGGCCACAACCAGCATAACCTTCCGCCCCTAACGAGCTGCAGCTGTTCCTTTAAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR CCA 90 bp TCTCCTCCTTCCTCCCGAGGTGCTGGGAACAGAACGGCACCAGCCTaGATCCCACTACACACTGTTGCAGACCCTCGGGGTCTGGGTTAT +
Preference number: 1 (lower is better)
Translates to: SPPSSRGAGNRTAPA*IPLHTVADPRGLGY
Trigger: ATAACCCAGACCCCGAGGGTCTGCAACAGTGTGTAGTGGGATCCAGGCTGGTGCCGTTCTGTTCCCAGCACCTCGGGAGGAAGGAGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR CCA 90 bp CCTCAGGCAGCAGCTCAGGGTGACCAAGCCAGCAGACGGGAGCATTaGGTGGAGGTCTCCTCTCAGAATGACCCTTGCCTGAACCCATCT +
Preference number: 1 (lower is better)
Translates to: PQAAAQGDQASRREH*VEVSSQNDPCLNPS
Trigger: AGATGGGTTCAGGCAAGGGTCATTCTGAGAGGAGACCTCCACCCAATGCTCCCGTCTGCTGGCTTGGTCACCCTGAGCTGCTGCCTGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR GCA 90 bp GATTGCAAAGGGCGGCACAGGACAGCCAAGTGCCCCTGGGATCCCTaGTGTCAAATTCTGGATTTGTGGGGAAACGTTCAGGGCGACCGC +
Preference number: 1 (lower is better)
Translates to: DCKGRHRTAKCPWDP*CQILDLWGNVQGDR
Trigger: GCGGTCGCCCTGAACGTTTCCCCACAAATCCAGAATTTGACAGCAGGGATCCCAGGGGCACTTGGCTGTCCTGTGCCGCCCTTTGCAATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR CCA 90 bp GCCAAGCAACCTCGAATCAGCGCTTGGAGACAGTGCTCGACTCTGTaGGAGGGAGGAGTCATCTTGAGCAGACCTGGCTGCCAGGGTTTC +
Preference number: 1 (lower is better)
Translates to: AKQPRISAWRQCSTL*EGGVILSRPGCQGF
Trigger: GAAACCCTGGCAGCCAGGTCTGCTCAAGATGACTCCTCCCTCCCACAGAGTCGAGCACTGTCTCCAAGCGCTGATTCGAGGTTGCTTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR GCA 90 bp AAACCCCTCAGCCCGGATTGCAAAGGGCGGCACAGGACAGCCAAGTaGCCCTGGGATCCCTGCTGTCAAATTCTGGATTTGTGGGGAAAC +
Preference number: 1 (lower is better)
Translates to: KPLSPDCKGRHRTAK*PWDPCCQILDLWGN
Trigger: GTTTCCCCACAAATCCAGAATTTGACAGCAGGGATCCCAGGGGCACTTGGCTGTCCTGTGCCGCCCTTTGCAATCCGGGCTGAGGGGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR GCA 90 bp GGCCATGCGGGTTCCTCTATAAAAGCTTCTCCCTTGCCCAGGCCCTaGCCAGCAGAAGAGCCTCATTCCTCATCCCACAAGTGCAAGGTG +
Preference number: 1 (lower is better)
Translates to: GHAGSSIKASPLPRP*PAEEPHSSSHKCKV
Trigger: CACCTTGCACTTGTGGGATGAGGAATGAGGCTCTTCTGCTGGGCAGGGCCTGGGCAAGGGAGAAGCTTTTATAGAGGAACCCGCATGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR GCA 90 bp CAAGGTGGCTTCTGGGCTTCCAAACACAATGGAACAAAGCCCCTCTaGTTCAGAACAGCTACCCTGGGTTGCTGGCTGGGGACTCAGGCC +
Preference number: 1 (lower is better)
Translates to: QGGFWASKHNGTKPL*FRTATLGCWLGTQA
Trigger: GGCCTGAGTCCCCAGCCAGCAACCCAGGGTAGCTGTTCTGAAGCAGAGGGGCTTTGTTCCATTGTGTTTGGAAGCCCAGAAGCCACCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR CCA 90 bp CGATGGCACTGGGTGAGTCAAAATTCATGCCTCTGGTATCCCGGATaGCAGCTCCAACTGCTGTCCCTTTGGTGGTCTGCGGTCCCTGTC +
Preference number: 1 (lower is better)
Translates to: RWHWVSQNSCLWYPG*QLQLLSLWWSAVPV
Trigger: GACAGGGACCGCAGACCACCAAAGGGACAGCAGTTGGAGCTGCCATCCGGGATACCAGAGGCATGAATTTTGACTCACCCAGTGCCATCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR TCA 90 bp GGTCCCAGGAGAGAGAGCTCTTCAGCACACTCCGATGGCACTGGGTaGGTCAAAATTCATGCCTCTGGTATCCCGGATGGCAGCTCCAAC +
Preference number: 1 (lower is better)
Translates to: GPRRESSSAHSDGTG*VKIHASGIPDGSSN
Trigger: GTTGGAGCTGCCATCCGGGATACCAGAGGCATGAATTTTGACTCACCCAGTGCCATCGGAGTGTGCTGAAGAGCTCTCTCTCCTGGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR TCA 90 bp CAGACCATGGTGGACTGGATCCATTCCCCCACAGTTCCCTGGCCCTaGCATCTTAAGCGAGGCCATTCCCTTCATGGGGAATGCTGGCAA +
Preference number: 1 (lower is better)
Translates to: QTMVDWIHSPTVPWP*HLKRGHSLHGECWQ
Trigger: TTGCCAGCATTCCCCATGAAGGGAATGGCCTCGCTTAAGATGTCAGGGCCAGGGAACTGTGGGGGAATGGATCCAGTCCACCATGGTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR GCA 90 bp AGCACACTGTGTTTATGGCCCACGCAGCAGGTGCTTTCAGGCCTCTaGTGTGAGGCACCATCCGCTGTTAACTTGGCCCAGAAAACCCCT +
Preference number: 1 (lower is better)
Translates to: STLCLWPTQQVLSGL*CEAPSAVNLAQKTP
Trigger: AGGGGTTTTCTGGGCCAAGTTAACAGCGGATGGTGCCTCACAGCAGAGGCCTGAAAGCACCTGCTGCGTGGGCCATAAACACAGTGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR GCA 90 bp TGCAGCGTTATCCCACCCTTGGGAGTGGGTAAGAACCAGTGTCTCTaGGTGTCTGAGCACACTGTGTTTATGGCCCACGCAGCAGGTGCT +
Preference number: 1 (lower is better)
Translates to: CSVIPPLGVGKNQCL*VSEHTVFMAHAAGA
Trigger: AGCACCTGCTGCGTGGGCCATAAACACAGTGTGCTCAGACACGCAGAGACACTGGTTCTTACCCACTCCCAAGGGTGGGATAACGCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR GCA 90 bp CCTGCCCAGCAGAAGAGCCTCATTCCTCATCCCACAAGTGCAAGGTaGAGCGTTATCCCACCCTTGGGAGTGGGTAAGAACCAGTGTCTC +
Preference number: 1 (lower is better)
Translates to: PAQQKSLIPHPTSAR*SVIPPLGVGKNQCL
Trigger: GAGACACTGGTTCTTACCCACTCCCAAGGGTGGGATAACGCTGCACCTTGCACTTGTGGGATGAGGAATGAGGCTCTTCTGCTGGGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR CCA 90 bp TCCTGTTTTAGTGGGGAGGGTCTCGCGGCTCTCAGGCAGGGTACCTaGATCGGCTTAATTATCAGGCTGGATGTAGATCTGGCGCTGGGT +
Preference number: 1 (lower is better)
Translates to: SCFSGEGLAALRQGT*IGLIIRLDVDLALG
Trigger: ACCCAGCGCCAGATCTACATCCAGCCTGATAATTAAGCCGATCCAGGTACCCTGCCTGAGAGCCGCGAGACCCTCCCCACTAAAACAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR CCA 90 bp ACAATGCTTGGGAAGGTCACGGCCAAGCAACCTCGAATCAGCGCTTaGAGACAGTGCTCGACTCTGTGGGAGGGAGGAGTCATCTTGAGC +
Preference number: 1 (lower is better)
Translates to: TMLGKVTAKQPRISA*RQCSTLWEGGVILS
Trigger: GCTCAAGATGACTCCTCCCTCCCACAGAGTCGAGCACTGTCTCCAAGCGCTGATTCGAGGTTGCTTGGCCGTGACCTTCCCAAGCATTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR CCA 90 bp GGTGGAAGGCGGAAGGAGCAGGGGGCTTATTTAAGGGACAATGCTTaGGAAGGTCACGGCCAAGCAACCTCGAATCAGCGCTTGGAGACA +
Preference number: 1 (lower is better)
Translates to: GGRRKEQGAYLRDNA*EGHGQATSNQRLET
Trigger: TGTCTCCAAGCGCTGATTCGAGGTTGCTTGGCCGTGACCTTCCCAAGCATTGTCCCTTAAATAAGCCCCCTGCTCCTTCCGCCTTCCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR CCA 90 bp ACAGCCAAGTGCCCCTGGGATCCCTGCTGTCAAATTCTGGATTTGTaGGGAAACGTTCAGGGCGACCGCATTCACGTATGTGTGGGGACG +
Preference number: 1 (lower is better)
Translates to: TAKCPWDPCCQILDL*GNVQGDRIHVCVGT
Trigger: CGTCCCCACACATACGTGAATGCGGTCGCCCTGAACGTTTCCCCACAAATCCAGAATTTGACAGCAGGGATCCCAGGGGCACTTGGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR CCA 90 bp GGCACAGGACAGCCAAGTGCCCCTGGGATCCCTGCTGTCAAATTCTaGATTTGTGGGGAAACGTTCAGGGCGACCGCATTCACGTATGTG +
Preference number: 1 (lower is better)
Translates to: GTGQPSAPGIPAVKF*ICGETFRATAFTYV
Trigger: CACATACGTGAATGCGGTCGCCCTGAACGTTTCCCCACAAATCCAGAATTTGACAGCAGGGATCCCAGGGGCACTTGGCTGTCCTGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR CCA 90 bp TGGGTAAGAACCAGTGTCTCTGCGTGTCTGAGCACACTGTGTTTATaGCCCACGCAGCAGGTGCTTTCAGGCCTCTGCTGTGAGGCACCA +
Preference number: 1 (lower is better)
Translates to: WVRTSVSACLSTLCL*PTQQVLSGLCCEAP
Trigger: TGGTGCCTCACAGCAGAGGCCTGAAAGCACCTGCTGCGTGGGCCATAAACACAGTGTGCTCAGACACGCAGAGACACTGGTTCTTACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR CCA 90 bp CATTGTTGGCTTCCACCTCCAGCTTTCTCAGCCGAGCTGACGGCATaGCCCCATCCTCCAAGGGAGGGTCATACTTGTTACTCCATGGTG +
Preference number: 1 (lower is better)
Translates to: HCWLPPPAFSAELTA*PHPPREGHTCYSMV
Trigger: CACCATGGAGTAACAAGTATGACCCTCCCTTGGAGGATGGGGCCATGCCGTCAGCTCGGCTGAGAAAGCTGGAGGTGGAAGCCAACAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR TCA 90 bp CCCAGTAATAAGCCAGAGTACAGCCTCCTCATAGAACAGAAGGGGTaGGGCCAGGCAACTTCCTCAGGCTTAGGGGATGACACGCATGGC +
Preference number: 1 (lower is better)
Translates to: PSNKPEYSLLIEQKG*GQATSSGLGDDTHG
Trigger: GCCATGCGTGTCATCCCCTAAGCCTGAGGAAGTTGCCTGGCCTCACCCCTTCTGTTCTATGAGGAGGCTGTACTCTGGCTTATTACTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR TCA 90 bp CCAAGCCAGCAGACGGGAGCATTGGGTGGAGGTCTCCTCTCAGAATaGCCCTTGCCTGAACCCATCTGCCAACCTGAACAGAAGATAGGT +
Preference number: 1 (lower is better)
Translates to: PSQQTGALGGGLLSE*PLPEPICQPEQKIG
Trigger: ACCTATCTTCTGTTCAGGTTGGCAGATGGGTTCAGGCAAGGGTCATTCTGAGAGGAGACCTCCACCCAATGCTCCCGTCTGCTGGCTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR TCA 90 bp GGCGATGCGGGGGTGACAGGGATAATTTCAAAGCATGGCTACCGCTaGGGCTGGCAGTGTGAATACCTGTGCCCAGCTGGCTCTATTTCT +
Preference number: 1 (lower is better)
Translates to: GDAGVTGIISKHGYR*GWQCEYLCPAGSIS
Trigger: AGAAATAGAGCCAGCTGGGCACAGGTATTCACACTGCCAGCCTCAGCGGTAGCCATGCTTTGAAATTATCCCTGTCACCCCCGCATCGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR TCA 90 bp GTCAAAGGCATTGTTGGCTTCCACCTCCAGCTTTCTCAGCCGAGCTaGCGGCATGGCCCCATCCTCCAAGGGAGGGTCATACTTGTTACT +
Preference number: 1 (lower is better)
Translates to: VKGIVGFHLQLSQPS*RHGPILQGRVILVT
Trigger: AGTAACAAGTATGACCCTCCCTTGGAGGATGGGGCCATGCCGTCAGCTCGGCTGAGAAAGCTGGAGGTGGAAGCCAACAATGCCTTTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR GCA 90 bp GAGCTCTTCAGCACACTCCGATGGCACTGGGTGAGTCAAAATTCATaGCTCTGGTATCCCGGATGGCAGCTCCAACTGCTGTCCCTTTGG +
Preference number: 1 (lower is better)
Translates to: ELFSTLRWHWVSQNS*LWYPGWQLQLLSLW
Trigger: CCAAAGGGACAGCAGTTGGAGCTGCCATCCGGGATACCAGAGGCATGAATTTTGACTCACCCAGTGCCATCGGAGTGTGCTGAAGAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR GCA 90 bp TCAGCCTTCTCATCTGTCAAATCACACTCCCTGCAGACATCATGCTaGCCCGATGGGGGTGGCGATGCGGGGGTGACAGGGATAATTTCA +
Preference number: 1 (lower is better)
Translates to: SAFSSVKSHSLQTSC*PDGGGDAGVTGIIS
Trigger: TGAAATTATCCCTGTCACCCCCGCATCGCCACCCCCATCGGGGCAGCATGATGTCTGCAGGGAGTGTGATTTGACAGATGAGAAGGCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR CCA 90 bp ATGTGGTCCCAGGAGAGAGAGCTCTTCAGCACACTCCGATGGCACTaGGTGAGTCAAAATTCATGCCTCTGGTATCCCGGATGGCAGCTC +
Preference number: 1 (lower is better)
Translates to: MWSQERELFSTLRWH*VSQNSCLWYPGWQL
Trigger: GAGCTGCCATCCGGGATACCAGAGGCATGAATTTTGACTCACCCAGTGCCATCGGAGTGTGCTGAAGAGCTCTCTCTCCTGGGACCACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR CCA 90 bp GTGTGTGAGCTGGCTCCATGGGCTGCTTCACGGAGAGCAGGTTTTTaGAAACGTAAGCAGCGGGTGTCCACTCACTCGTTCACTAAGGCT +
Preference number: 1 (lower is better)
Translates to: VCELAPWAASRRAGF*KRKQRVSTHSFTKA
Trigger: AGCCTTAGTGAACGAGTGAGTGGACACCCGCTGCTTACGTTTCCAAAAACCTGCTCTCCGTGAAGCAGCCCATGGAGCCAGCTCACACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR CCA 90 bp CGCCACCTTCAAAATACAGGTCTCGATACTGGTCAAAGGCATTGTTaGCTTCCACCTCCAGCTTTCTCAGCCGAGCTGACGGCATGGCCC +
Preference number: 1 (lower is better)
Translates to: RHLQNTGLDTGQRHC*LPPPAFSAELTAWP
Trigger: GGGCCATGCCGTCAGCTCGGCTGAGAAAGCTGGAGGTGGAAGCCAACAATGCCTTTGACCAGTATCGAGACCTGTATTTTGAAGGTGGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR TCA 90 bp GGAGAAACGCAGACATTTGGTTCATGCTGGGGAAATACACGTTTCTaGGTATCTTCCCAGGACTGTCCCTGGCTCTGCGGCGGCCAAAGG +
Preference number: 1 (lower is better)
Translates to: GETQTFGSCWGNTRF*VSSQDCPWLCGGQR
Trigger: CCTTTGGCCGCCGCAGAGCCAGGGACAGTCCTGGGAAGATACTCAGAAACGTGTATTTCCCCAGCATGAACCAAATGTCTGCGTTTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR TCA 90 bp ATTTCCCAGGGAAGGGAAAGGCTTCACCAGAGGCAGCGTGAAGAGTaGGGCCTTAGCTATGACTCCCGGCTCCTGTGGTTTTCTAGCTGT +
Preference number: 1 (lower is better)
Translates to: ISQGRERLHQRQREE*GLSYDSRLLWFSSC
Trigger: ACAGCTAGAAAACCACAGGAGCCGGGAGTCATAGCTAAGGCCTCACTCTTCACGCTGCCTCTGGTGAAGCCTTTCCCTTCCCTGGGAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR GCA 90 bp AAATGGTGGAAGGCGGAAGGAGCAGGGGGCTTATTTAAGGGACAATaGTTGGGAAGGTCACGGCCAAGCAACCTCGAATCAGCGCTTGGA +
Preference number: 1 (lower is better)
Translates to: KWWKAEGAGGLFKGQ*LGRSRPSNLESALG
Trigger: TCCAAGCGCTGATTCGAGGTTGCTTGGCCGTGACCTTCCCAAGCATTGTCCCTTAAATAAGCCCCCTGCTCCTTCCGCCTTCCACCATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR CCA 90 bp GGTCACTGGCTCTTCTGGGAAGGAAGAGCCAAGCCCGCCAGGTCTTaGCTGGATCACACGAAGGAGAAAGTTCCAGAGCTAGAATCATGT +
Preference number: 1 (lower is better)
Translates to: GHWLFWEGRAKPARS*LDHTKEKVPELESC
Trigger: ACATGATTCTAGCTCTGGAACTTTCTCCTTCGTGTGATCCAGCCAAGACCTGGCGGGCTTGGCTCTTCCTTCCCAGAAGAGCCAGTGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR CCA 90 bp TCATTCCTCATCCCACAAGTGCAAGGTGCAGCGTTATCCCACCCTTaGGAGTGGGTAAGAACCAGTGTCTCTGCGTGTCTGAGCACACTG +
Preference number: 1 (lower is better)
Translates to: SFLIPQVQGAALSHP*EWVRTSVSACLSTL
Trigger: CAGTGTGCTCAGACACGCAGAGACACTGGTTCTTACCCACTCCCAAGGGTGGGATAACGCTGCACCTTGCACTTGTGGGATGAGGAATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR CCA 90 bp TTCAGCACACTCCGATGGCACTGGGTGAGTCAAAATTCATGCCTCTaGTATCCCGGATGGCAGCTCCAACTGCTGTCCCTTTGGTGGTCT +
Preference number: 1 (lower is better)
Translates to: FSTLRWHWVSQNSCL*YPGWQLQLLSLWWS
Trigger: AGACCACCAAAGGGACAGCAGTTGGAGCTGCCATCCGGGATACCAGAGGCATGAATTTTGACTCACCCAGTGCCATCGGAGTGTGCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR CCA 90 bp CGTAAGCAGCGGGTGTCCACTCACTCGTTCACTAAGGCTCGAATGTaGACACGTCCCCCAAGCACTCAGCCTTCTCATCTGTCAAATCAC +
Preference number: 1 (lower is better)
Translates to: RKQRVSTHSFTKARM*TRPPSTQPSHLSNH
Trigger: GTGATTTGACAGATGAGAAGGCTGAGTGCTTGGGGGACGTGTCCACATTCGAGCCTTAGTGAACGAGTGAGTGGACACCCGCTGCTTACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR CCA 90 bp AGTGAAGCAGGGCCCAGGAGAAGCAACAGCACCCAGACTGAGTTCTaGCTACCGAATCCCTACAAGTCACAGGAAGAGCCCTCAAAATAC +
Preference number: 1 (lower is better)
Translates to: SEAGPRRSNSTQTEF*LPNPYKSQEEPSKY
Trigger: GTATTTTGAGGGCTCTTCCTGTGACTTGTAGGGATTCGGTAGCCAGAACTCAGTCTGGGTGCTGTTGCTTCTCCTGGGCCCTGCTTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR CCA 90 bp CTCATCCCACAAGTGCAAGGTGCAGCGTTATCCCACCCTTGGGAGTaGGTAAGAACCAGTGTCTCTGCGTGTCTGAGCACACTGTGTTTA +
Preference number: 1 (lower is better)
Translates to: LIPQVQGAALSHPWE*VRTSVSACLSTLCL
Trigger: TAAACACAGTGTGCTCAGACACGCAGAGACACTGGTTCTTACCCACTCCCAAGGGTGGGATAACGCTGCACCTTGCACTTGTGGGATGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR CCA 90 bp GGTCACTTATGTGGCCACCAACAGCCTCGCGGGGCACTCTGGGAATaGGAACTTCTGGAGATGAGCAATGTACCACAATGTACCAAGATG +
Preference number: 1 (lower is better)
Translates to: GHLCGHQQPRGALWE*ELLEMSNVPQCTKM
Trigger: CATCTTGGTACATTGTGGTACATTGCTCATCTCCAGAAGTTCCCATTCCCAGAGTGCCCCGCGAGGCTGTTGGTGGCCACATAAGTGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR TCA 90 bp ATCAGTCACAGGATCCAGTACAAAGCCAGCGCACTGCCCCTTATATaGGCATCGCACGTAGCGAGGAGTTCAAAGCCAGGCCATCAATCA +
Preference number: 1 (lower is better)
Translates to: ISHRIQYKASALPLI*ASHVARSSKPGHQS
Trigger: TGATTGATGGCCTGGCTTTGAACTCCTCGCTACGTGCGATGCTCATATAAGGGGCAGTGCGCTGGCTTTGTACTGGATCCTGTGACTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR TCA 90 bp GTCTCTTCCACCTTTACCTCACTGGCCTGGATACTTTCCCAGCCCTaGTGTCTTCCCCTTGATAGAGTAAAGTCTGGGGACACCCAAGAG +
Preference number: 1 (lower is better)
Translates to: VSSTFTSLAWILSQP*CLPLDRVKSGDTQE
Trigger: CTCTTGGGTGTCCCCAGACTTTACTCTATCAAGGGGAAGACATCAGGGCTGGGAAAGTATCCAGGCCAGTGAGGTAAAGGTGGAAGAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR TCA 90 bp CACGATGCAGGGGAACAGCACATAGTGAAGTCTGGTAGCATTCTATaGCCGAGTCATCTCATAACCAACCCAACCACCAAACGAGTGCCC +
Preference number: 1 (lower is better)
Translates to: HDAGEQHIVKSGSIL*PSHLITNPTTKRVP
Trigger: GGGCACTCGTTTGGTGGTTGGGTTGGTTATGAGATGACTCGGTCATAGAATGCTACCAGACTTCACTATGTGCTGTTCCCCTGCATCGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR TCA 90 bp CAGCTCGTTTGTAAGAGGGGGATAACCCTCTCTCATGGGTTCTTGTaGAGACCGAATGAGACAGAGAATACCTGGAGGCCCACTTGCATG +
Preference number: 1 (lower is better)
Translates to: QLVCKRGITLSHGFL*RPNETENTWRPTCM
Trigger: CATGCAAGTGGGCCTCCAGGTATTCTCTGTCTCATTCGGTCTTCACAAGAACCCATGAGAGAGGGTTATCCCCCTCTTACAAACGAGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR CCA 90 bp TCTGTGTGTAGGTCCCTATGTCACCCTAAGCCACAAGGTGGCTTCTaGGCTTCCAAACACAATGGAACAAAGCCCCTCTGCTTCAGAACA +
Preference number: 1 (lower is better)
Translates to: SVCRSLCHPKPQGGF*ASKHNGTKPLCFRT
Trigger: TGTTCTGAAGCAGAGGGGCTTTGTTCCATTGTGTTTGGAAGCCCAGAAGCCACCTTGTGGCTTAGGGTGACATAGGGACCTACACACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR CCA 90 bp TGGATTTGTGGGGAAACGTTCAGGGCGACCGCATTCACGTATGTGTaGGGACGCTCATCAACAAAGCCAGAAACAATGAAGGCTTATGGA +
Preference number: 1 (lower is better)
Translates to: WICGETFRATAFTYV*GRSSTKPETMKAYG
Trigger: TCCATAAGCCTTCATTGTTTCTGGCTTTGTTGATGAGCGTCCCCACACATACGTGAATGCGGTCGCCCTGAACGTTTCCCCACAAATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR CCA 90 bp TTTATTTTCCATGTCCTCTACCAGGCGCCCGATGTTGGCTATGTGTaGGGAGCAGTCACTCACAGTTTCATCCTTCTCCATCTGTCTGGT +
Preference number: 1 (lower is better)
Translates to: FIFHVLYQAPDVGYV*GAVTHSFILLHLSG
Trigger: ACCAGACAGATGGAGAAGGATGAAACTGTGAGTGACTGCTCCCCACACATAGCCAACATCGGGCGCCTGGTAGAGGACATGGAAAATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674228.1
ENST00000674449.1
3UTR CCA 90 bp CCAAGGCACAAGTCACTGAGAAACCGGTTAAAAGGTGGCGAGCAATaGCTTGCAGAAGTGGACAAACATTTACTGATAGCTGGGCACGAC +
Preference number: 1 (lower is better)
Translates to: PRHKSLRNRLKGGEQ*LAEVDKHLLIAGHD
Trigger: GTCGTGCCCAGCTATCAGTAAATGTTTGTCCACTTCTGCAAGCCATTGCTCGCCACCTTTTAACCGGTTTCTCAGTGACTTGTGCCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR TCA 90 bp CAAGAAGAGTGCTACGGAGAGTGCACTCAGCCGGACTCTCACGTTTaGTTCACACCAGCCATGGGAAGGAAGAATCAGAAAAATCAATCC +
Preference number: 1 (lower is better)
Translates to: QEECYGECTQPDSHV*FTPAMGRKNQKNQS
Trigger: GGATTGATTTTTCTGATTCTTCCTTCCCATGGCTGGTGTGAATCAAACGTGAGAGTCCGGCTGAGTGCACTCTCCGTAGCACTCTTCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR TCA 90 bp GACACAGCACATAGACACACCACATTTACTCTGTTGCTTTCAGTGTaGCTAACCCAAAGGAACCTGGCAAGCAGGAGAAACCAGACCTCC +
Preference number: 1 (lower is better)
Translates to: DTAHRHTTFTLLLSV*LTQRNLASRRNQTS
Trigger: GGAGGTCTGGTTTCTCCTGCTTGCCAGGTTCCTTTGGGTTAGTCACACTGAAAGCAACAGAGTAAATGTGGTGTGTCTATGTGCTGTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR CCA 90 bp TGTAAGCCTGCTTACTCTATTAACACAGATAAAGCAGATCCTATCTaGCCTTCAAGATCCCCAAAGGCAGGGGTAGTCGTCTTGGGTCCC +
Preference number: 1 (lower is better)
Translates to: CKPAYSINTDKADPI*PSRSPKAGVVVLGP
Trigger: GGGACCCAAGACGACTACCCCTGCCTTTGGGGATCTTGAAGGCCAGATAGGATCTGCTTTATCTGTGTTAATAGAGTAAGCAGGCTTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR TCA 90 bp GCTGTTTGCATGGAGCAGCAGTGCATTAGCTACTTTCAAAACATCTaGCTGATCCCAGATTACACGAGACAAAGGCCTGGATCCTTTGCC +
Preference number: 1 (lower is better)
Translates to: AVCMEQQCISYFQNI*LIPDYTRQRPGSFA
Trigger: GGCAAAGGATCCAGGCCTTTGTCTCGTGTAATCTGGGATCAGTCAGATGTTTTGAAAGTAGCTAATGCACTGCTGCTCCATGCAAACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR TCA 90 bp CTTGCTGCCAGTGTGCAGAGTAAGGCCATAGAAGGGCCAAGTTTATaGAGCCAAGGGAACATCTTCACATCATATGATTCTTGGCCCTCA +
Preference number: 1 (lower is better)
Translates to: LAASVQSKAIEGPSL*SQGNIFTSYDSWPS
Trigger: TGAGGGCCAAGAATCATATGATGTGAAGATGTTCCCTTGGCTTCATAAACTTGGCCCTTCTATGGCCTTACTCTGCACACTGGCAGCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR CCA 90 bp ATGAGAAGCGCCAAGGCACAAGTCACTGAGAAACCGGTTAAAAGGTaGCGAGCAATGGCTTGCAGAAGTGGACAAACATTTACTGATAGC +
Preference number: 1 (lower is better)
Translates to: MRSAKAQVTEKPVKR*RAMACRSGQTFTDS
Trigger: GCTATCAGTAAATGTTTGTCCACTTCTGCAAGCCATTGCTCGCCACCTTTTAACCGGTTTCTCAGTGACTTGTGCCTTGGCGCTTCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR TCA 90 bp TCTCTTCAAAGCCTCCACCAGGTCATTCTTCAGAGCTTCTTGTTTTaGTTTGTCTGCAAAAGTCTGCACAGACCTGCAAGGGAGGAAAGG +
Preference number: 1 (lower is better)
Translates to: SLQSLHQVILQSFLF*FVCKSLHRPAREER
Trigger: CCTTTCCTCCCTTGCAGGTCTGTGCAGACTTTTGCAGACAAATCAAAACAAGAAGCTCTGAAGAATGACCTGGTGGAGGCTTTGAAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR TCA 90 bp CTTCAACCTGTGTCCAAGTACCATCCTGCAACTAAGCCTCAGAGGTaGTCTCTCTCATTATCTGGCTATGGCGAAAGACAGCTCTTGATA +
Preference number: 1 (lower is better)
Translates to: LQPVSKYHPATKPQR*SLSLSGYGERQLLI
Trigger: TATCAAGAGCTGTCTTTCGCCATAGCCAGATAATGAGAGAGATCACCTCTGAGGCTTAGTTGCAGGATGGTACTTGGACACAGGTTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR GCA 90 bp CTGGCACTGTTTCTTATACACAGTAGGCACTGTACCAGTGGCACCTaGTGTTATTATGAATCACGATGCAGGGGAACAGCACATAGTGAA +
Preference number: 1 (lower is better)
Translates to: LALFLIHSRHCTSGT*CYYESRCRGTAHSE
Trigger: TTCACTATGTGCTGTTCCCCTGCATCGTGATTCATAATAACAGCAGGTGCCACTGGTACAGTGCCTACTGTGTATAAGAAACAGTGCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR GCA 90 bp TTTTGGTTTGCTCTTAAAAAGGCAAAGGATGGAAGGCCTGCTGGGTaGCAATATGCAGAAACAAACTCCTTCCTCAGCTCAGGGCTCAAA +
Preference number: 1 (lower is better)
Translates to: FWFALKKAKDGRPAG*QYAETNSFLSSGLK
Trigger: TTTGAGCCCTGAGCTGAGGAAGGAGTTTGTTTCTGCATATTGGCACCCAGCAGGCCTTCCATCCTTTGCCTTTTTAAGAGCAAACCAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR CCA 90 bp ATAGAATGTCACACAGTACACCATATATCAGTGGTAGATACGGCCTaGCACTTCAACCTGTGTCCAAGTACCATCCTGCAACTAAGCCTC +
Preference number: 1 (lower is better)
Translates to: IECHTVHHISVVDTA*HFNLCPSTILQLSL
Trigger: GAGGCTTAGTTGCAGGATGGTACTTGGACACAGGTTGAAGTGCCAGGCCGTATCTACCACTGATATATGGTGTACTGTGTGACATTCTAT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR CCA 90 bp CTCTTGCTACTCATCCTCAGAGCTTATTCACTGGTCAATGACCAATaGCCTGAGAGAATCCAACTAGGGTCATTCTTTTCGGGGATCAAG +
Preference number: 1 (lower is better)
Translates to: LLLLILRAYSLVNDQ*PERIQLGSFFSGIK
Trigger: CTTGATCCCCGAAAAGAATGACCCTAGTTGGATTCTCTCAGGCCATTGGTCATTGACCAGTGAATAAGCTCTGAGGATGAGTAGCAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR TCA 90 bp ATTGCGATTCATCAGGATCCAACAATTCAGAAGCACCTGGAATCGTaGATTAAAGACCCTGTCAACACAGTCTGCTCTTCCAACCCCCAA +
Preference number: 1 (lower is better)
Translates to: IAIHQDPTIQKHLES*IKDPVNTVCSSNPQ
Trigger: TTGGGGGTTGGAAGAGCAGACTGTGTTGACAGGGTCTTTAATTCACGATTCCAGGTGCTTCTGAATTGTTGGATCCTGATGAATCGCAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR TCA 90 bp TCTCTTCAAAGCCTCCACCAGGTCATTCTTCAGAGCTTCTTGTTTTaGTTTGTCTGCAAAAGTCTGCACAGACCTCAGCCCATTGACGAT +
Preference number: 1 (lower is better)
Translates to: SLQSLHQVILQSFLF*FVCKSLHRPQPIDD
Trigger: ATCGTCAATGGGCTGAGGTCTGTGCAGACTTTTGCAGACAAATCAAAACAAGAAGCTCTGAAGAATGACCTGGTGGAGGCTTTGAAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR GCA 90 bp TCAAGGGAGAATGCTTGGCCAGGTAACAGATTCCAGATAGAACACTaGCACTTAGGATTTACCTCTCAAAACTCACAAGCGCTAAAGTGC +
Preference number: 1 (lower is better)
Translates to: SRENAWPGNRFQIEH*HLGFTSQNSQALKC
Trigger: GCACTTTAGCGCTTGTGAGTTTTGAGAGGTAAATCCTAAGTGGCAGTGTTCTATCTGGAATCTGTTACCTGGCCAAGCATTCTCCCTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR TCA 90 bp CAAATGGTGCAGATAGGGACCGACAGCTGCTACGGAGAGTGCAGATaGCACATCAGGACTTTACTTTCCAAAATCAACATAATGATCATC +
Preference number: 1 (lower is better)
Translates to: QMVQIGTDSCYGECR*HIRTLLSKINIMII
Trigger: GATGATCATTATGTTGATTTTGGAAAGTAAAGTCCTGATGTGTCATCTGCACTCTCCGTAGCAGCTGTCGGTCCCTATCTGCACCATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR TCA 90 bp GGTAAGGATGGTTTGATATCCCAGTTCCACCACTTACTAGCTCTGTaGACCTGGGTAAGTTATATCACCTTTCTGATCTGTCAGCTCGTT +
Preference number: 1 (lower is better)
Translates to: GKDGLISQFHHLLAL*TWVSYITFLICQLV
Trigger: AACGAGCTGACAGATCAGAAAGGTGATATAACTTACCCAGGTTCACAGAGCTAGTAAGTGGTGGAACTGGGATATCAAACCATCCTTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR TCA 90 bp CATAAAAGCCCCTGCAGAACCATACACCATGTATCATTACATATGTaGACGATGAGATGGGAAGGGAGAACAAGGGAAGCAGAAGTCCAA +
Preference number: 1 (lower is better)
Translates to: HKSPCRTIHHVSLHM*TMRWEGRTREAEVQ
Trigger: TTGGACTTCTGCTTCCCTTGTTCTCCCTTCCCATCTCATCGTTCACATATGTAATGATACATGGTGTATGGTTCTGCAGGGGCTTTTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR TCA 90 bp TTTGCATGGAGCAGCAGTGCATTAGCTACTTTCAAAACATCTGACTaGTCCCAGATTACACGAGACAAAGGCCTGGATCCTTTGCCTTTA +
Preference number: 1 (lower is better)
Translates to: FAWSSSALATFKTSD*SQITRDKGLDPLPL
Trigger: TAAAGGCAAAGGATCCAGGCCTTTGTCTCGTGTAATCTGGGATCAGTCAGATGTTTTGAAAGTAGCTAATGCACTGCTGCTCCATGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR TCA 90 bp GCTCTTCTTTCTTCCTCTATTGACATGAGTACTTTGGGGAAAGAATaGGAAGCGCCAAGGCACAAGTCACTGAGAAACCGGTTAAAAGGT +
Preference number: 1 (lower is better)
Translates to: ALLSSSIDMSTLGKE*EAPRHKSLRNRLKG
Trigger: ACCTTTTAACCGGTTTCTCAGTGACTTGTGCCTTGGCGCTTCTCATTCTTTCCCCAAAGTACTCATGTCAATAGAGGAAGAAAGAAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR CCA 90 bp AAGCAGAGACTTTCTTGCCTAGTTAAACAGATTCACGGCTATTTTTaGTTTGCTCTTAAAAAGGCAAAGGATGGAAGGCCTGCTGGGTGC +
Preference number: 1 (lower is better)
Translates to: KQRLSCLVKQIHGYF*FALKKAKDGRPAGC
Trigger: GCACCCAGCAGGCCTTCCATCCTTTGCCTTTTTAAGAGCAAACCAAAAATAGCCGTGAATCTGTTTAACTAGGCAAGAAAGTCTCTGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR CCA 90 bp TCCTTCCCTACATCTGGATCTGTCACAAGCTCAAGTCATGGTTCTTaGCCATTACCAACAAGCAAGACTATTTTCCTTTCCATTAGCGAA +
Preference number: 1 (lower is better)
Translates to: SFPTSGSVTSSSHGS*PLPTSKTIFLSISE
Trigger: TTCGCTAATGGAAAGGAAAATAGTCTTGCTTGTTGGTAATGGCCAAGAACCATGACTTGAGCTTGTGACAGATCCAGATGTAGGGAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR TCA 90 bp CATTCACGTATGTGTGGGGACGCTCATCAACAAAGCCAGAAACAATaGAGGCTTATGGAGATTTCACAGTTTACAAAACGCCTTTCACAT +
Preference number: 1 (lower is better)
Translates to: HSRMCGDAHQQSQKQ*RLMEISQFTKRLSH
Trigger: ATGTGAAAGGCGTTTTGTAAACTGTGAAATCTCCATAAGCCTTCATTGTTTCTGGCTTTGTTGATGAGCGTCCCCACACATACGTGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR TCA 90 bp AGAAGGGCCAAGTTTATGAAGCCAAGGGAACATCTTCACATCATATaGTTCTTGGCCCTCATGGATGTGTGGGTATTTTTGAAACAGCTT +
Preference number: 1 (lower is better)
Translates to: RRAKFMKPREHLHII*FLALMDVWVFLKQL
Trigger: AAGCTGTTTCAAAAATACCCACACATCCATGAGGGCCAAGAATCATATGATGTGAAGATGTTCCCTTGGCTTCATAAACTTGGCCCTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR CCA 90 bp AATCCATACGGGCCTTTGGAGATAAACAGGTCTGACTTTAATTCCTaGCTCTACCCCTTGCTGTGGACAAATACTTTAATCTGTGTCTTA +
Preference number: 1 (lower is better)
Translates to: NPYGPLEINRSDFNS*LYPLLWTNTLICVL
Trigger: TAAGACACAGATTAAAGTATTTGTCCACAGCAAGGGGTAGAGCCAGGAATTAAAGTCAGACCTGTTTATCTCCAAAGGCCCGTATGGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR CCA 90 bp TTTCACCTCCATGTCCTGTGGTCTTGTGTGAGTCATTTAACCTCTTaGAACCTTGGTCTCATTTGTAAAAGGAGGAACAAAACCATCTTC +
Preference number: 1 (lower is better)
Translates to: FHLHVLWSCVSHLTS*NLGLICKRRNKTIF
Trigger: GAAGATGGTTTTGTTCCTCCTTTTACAAATGAGACCAAGGTTCCAAGAGGTTAAATGACTCACACAAGACCACAGGACATGGAGGTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR TCA 90 bp TTCACATCATATGATTCTTGGCCCTCATGGATGTGTGGGTATTTTTaGAACAGCTTAACAACGGATTTCAGCTGGATTCACTCTAGCACA +
Preference number: 1 (lower is better)
Translates to: FTSYDSWPSWMCGYF*NSLTTDFSWIHSST
Trigger: TGTGCTAGAGTGAATCCAGCTGAAATCCGTTGTTAAGCTGTTTCAAAAATACCCACACATCCATGAGGGCCAAGAATCATATGATGTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR CCA 90 bp TGTGTGGGGACGCTCATCAACAAAGCCAGAAACAATGAAGGCTTATaGAGATTTCACAGTTTACAAAACGCCTTTCACATATATTATCTC +
Preference number: 1 (lower is better)
Translates to: CVGTLINKARNNEGL*RFHSLQNAFHIYYL
Trigger: GAGATAATATATGTGAAAGGCGTTTTGTAAACTGTGAAATCTCCATAAGCCTTCATTGTTTCTGGCTTTGTTGATGAGCGTCCCCACACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR TCA 90 bp AGTAAGGCAACACATCTGATTCACTTTATTAAGGGAGTAACAACATaGACACTTAAGTCTCATAAAGAATCAGAATCACCCCCACCTCCA +
Preference number: 1 (lower is better)
Translates to: SKATHLIHFIKGVTT*TLKSHKESESPPPP
Trigger: TGGAGGTGGGGGTGATTCTGATTCTTTATGAGACTTAAGTGTTCATGTTGTTACTCCCTTAATAAAGTGAATCAGATGTGTTGCCTTACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR CCA 90 bp TTTAGACAGGTGCATAATAGTGTGAATTTTCTGAAACTACCGCTTTaGGAAGAAACTAAAACTGCATGTGAACTTCAATGCTACAACAGT +
Preference number: 1 (lower is better)
Translates to: FRQVHNSVNFLKLPL*EETKTACELQCYNS
Trigger: ACTGTTGTAGCATTGAAGTTCACATGCAGTTTTAGTTTCTTCCCAAAGCGGTAGTTTCAGAAAATTCACACTATTATGCACCTGTCTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR-3UTR CCA 90 bp GGACTGTCCCTGGCTCTGCGGCGGCCAAAGGCATCAGCCCCCACGGCCCCCAGGCGCAGCCCCTGGACCTaGGCTCTGCAGCCCCAGTTG +
Preference number: 2 (lower is better)
Translates to: GLSLALRRPKASAPTAPRRSPWT*ALQPQL
Trigger: CAACTGGGGCTGCAGAGCCCAGGTCCAGGGGCTGCG...CCTGGGGGCCGTGGGGGCTGATGCCTTTGGCCGCCGCAGAGCCAGGGACAGTCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR TCA 90 bp CCCCCACCCCGCGGCCTCCGTGGGACGGGAGAGTCTGCGCAGGACGGCACCGAGGCGCTGTGCGGTCAATaGTGCAGCTGTTATGTGACC +
Preference number: 2 (lower is better)
Translates to: PPPRGLRGTGESAQDGTEALCGQ*CSCYVT
Trigger: GGTCACATAACAGCTGCATCATTGACCGCACAGCGC...CTCGGTGCCGTCCTGCGCAGACTCTCCCGTCCCACGGAGGCCGCGGGGTGGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264202.8
ENST00000264203.7
ENST00000375142.5
3UTR-3UTR CCA 90 bp GCAGCCGGGCTGCCCGGAATGTGGTGTCATGGCTCCCCTAGGCCCAGGCTGGAGCCCCCAGCTGGGCTCTaGCCTCATGTCAGAGGCCTG +
Preference number: 2 (lower is better)
Translates to: AAGLPGMWCHGSPRPRLEPPAGL*PHVRGL
Trigger: CAGGCCTCTGACATGAGGCCAGAGCCCAGCTGGGGG...CTCCAGCCTGGGCCTAGGGGAGCCATGACACCACATTCCGGGCAGCCCGGCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR CAA 90 bp GAGGCGGTGGAGGCCTGGGGGCCACCATGCCAGTGCCTGGCTGATTaGCTGCATGGACCCGCTTCCTGGGGTGAGGCTCTGGGTCACTGG +
Preference number: 2 (lower is better)
Translates to: EAVEAWGPPCQCLAD*LHGPASWGEALGHW
Trigger: CCAGTGACCCAGAGCCTCACCCCAGGAAGCGGGTCCATGCAGCAAATCAGCCAGGCACTGGCATGGTGGCCCCCAGGCCTCCACCGCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR TCA 90 bp GGACTGTCCCTGGCTCTGCGGCGGCCAAAGGCATCAGCCCCCACGGCCCCCAGGGATGCAGCTGTTATGTaGCCTGTCGGGGAGGGAAGG +
Preference number: 2 (lower is better)
Translates to: GLSLALRRPKASAPTAPRDAAVM*PVGEGR
Trigger: CCTTCCCTCCCCGACAGGTCACATAACAGCTGCATC...CCTGGGGGCCGTGGGGGCTGATGCCTTTGGCCGCCGCAGAGCCAGGGACAGTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR CCA 90 bp CTGGCTGCCAGGGTTTCTACGCCAGGACGCCCCCAGTGGGCGGCCAGGGAACTGGGGCTGCCCGGAATGTaGTGTCATGGCTCCCCTAGG +
Preference number: 2 (lower is better)
Translates to: LAARVSTPGRPQWAARELGLPGM*CHGSPR
Trigger: CCTAGGGGAGCCATGACACCACATTCCGGGCAGCCC...CAGTTCCCTGGCCGCCCACTGGGGGCGTCCTGGCGTAGAAACCCTGGCAGCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR CCA 90 bp CTTCCCAGGACTGTCCCTGGCTCTGCGGCGGCCAAAGGCATCAGCCCCCACGGCGATGGTGCAGGACACTaGCCACTGGCAGCAGAGCCC +
Preference number: 2 (lower is better)
Translates to: LPRTVPGSAAAKGISPHGDGAGH*PLAAEP
Trigger: GGGCTCTGCTGCCAGTGGCCAGTGTCCTGCACCATC...GCCGTGGGGGCTGATGCCTTTGGCCGCCGCAGAGCCAGGGACAGTCCTGGGAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR TCA 90 bp CGTGGGACGGGAGAGTCTGCGCAGGACGGCACCGAGGGCCACCTCTGCTCCCAGGATGCAGCTGTTATGTaGCCTGTCGGGGAGGGAAGG +
Preference number: 2 (lower is better)
Translates to: RGTGESAQDGTEGHLCSQDAAVM*PVGEGR
Trigger: CCTTCCCTCCCCGACAGGTCACATAACAGCTGCATC...CTGGGAGCAGAGGTGGCCCTCGGTGCCGTCCTGCGCAGACTCTCCCGTCCCACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264202.8
ENST00000264203.7
ENST00000375142.5
3UTR-3UTR TCA 90 bp GGAGGTCAACATGGCCAGCGGGAGATGCGGCGGGCAAAGCAGCAGCGCACAGGAGACAAACTGCAGGGCTaGGGAGGCTCCGGGGGCAAG +
Preference number: 2 (lower is better)
Translates to: GGQHGQREMRRAKQQRTGDKLQG*GGSGGK
Trigger: CTTGCCCCCGGAGCCTCCTCAGCCCTGCAGTTTGTC...TCCTGTGCGCTGCTGCTTTGCCCGCCGCATCTCCCGCTGGCCATGTTGACCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR GCA 90 bp CTGGCCTCATGTCAGAGGCCTGCCTCCTGCTCTGTCCGCCGTGGACCTGGAGGGCTGGACAAGGGCCTCTaGGAGGAGTGCCAGAGGCCA +
Preference number: 2 (lower is better)
Translates to: LASCQRPASCSVRRGPGGLDKGL*EECQRP
Trigger: TGGCCTCTGGCACTCCTCGCAGAGGCCCTTGTCCAG...CCCTCCAGGTCCACGGCGGACAGAGCAGGAGGCAGGCCTCTGACATGAGGCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR GCA 90 bp CTTCCCAGGACTGTCCCTGGCTCTGCGGCGGCCAAAGGCATCAGCCCCCACGGCCATCTCAGCCGACCGTaGCTCCTCGACTGGACAAGG +
Preference number: 2 (lower is better)
Translates to: LPRTVPGSAAAKGISPHGHLSRP*LLDWTR
Trigger: CCTTGTCCAGTCGAGGAGGCACGGTCGGCTGAGATG...GCCGTGGGGGCTGATGCCTTTGGCCGCCGCAGAGCCAGGGACAGTCCTGGGAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR GCA 90 bp AGGTCACCCCTTCCAAGCCAGCTAGCCCTGGACAGGCAATGTGCCGCTGAGCAGGGGCAGCCCCGGGACTaGAGCCTGCCTCTCCTCTGG +
Preference number: 2 (lower is better)
Translates to: RSPLPSQLALDRQCAAEQGQPRD*SLPLLW
Trigger: CCAGAGGAGAGGCAGGCTGCAGTCCCGGGGCTGCCC...CTGCTCAGCGGCACATTGCCTGTCCAGGGCTAGCTGGCTTGGAAGGGGTGACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR CCA 90 bp CCCCCACCCCGCGGCCTCCGTGGGACGGGAGAGTCTGCGCAGGACGGCACCGAGATTCTCAGGGAGAGATaGCGCTGTGCGGTCAATGAT +
Preference number: 2 (lower is better)
Translates to: PPPRGLRGTGESAQDGTEILRER*RCAVND
Trigger: ATCATTGACCGCACAGCGCCATCTCTCCCTGAGAAT...CTCGGTGCCGTCCTGCGCAGACTCTCCCGTCCCACGGAGGCCGCGGGGTGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264202.8
ENST00000264203.7
ENST00000375142.5
3UTR-3UTR CCA 90 bp CTGGCCTCATGTCAGAGGCCTGCCTCCTGCTCTGTCCGCCGTGGACCTGGAGGGCTGCTCTGTCCGCCGTaGACCTGGAGGGTCCAGAGA +
Preference number: 2 (lower is better)
Translates to: LASCQRPASCSVRRGPGGLLCPP*TWRVQR
Trigger: TCTCTGGACCCTCCAGGTCCACGGCGGACAGAGCAG...CCCTCCAGGTCCACGGCGGACAGAGCAGGAGGCAGGCCTCTGACATGAGGCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR CCA 90 bp CTTCCCAGGACTGTCCCTGGCTCTGCGGCGGCCAAAGGCATCAGCCCCCACGGCTTCCCAGCCACTGCCTaGGGACTGTGCAGGTTGGCT +
Preference number: 2 (lower is better)
Translates to: LPRTVPGSAAAKGISPHGFPATA*GLCRLA
Trigger: AGCCAACCTGCACAGTCCCCAGGCAGTGGCTGGGAA...GCCGTGGGGGCTGATGCCTTTGGCCGCCGCAGAGCCAGGGACAGTCCTGGGAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR CCA 90 bp GCAGCCGGGCTGCCCGGAATGTGGTGTCATGGCTCCCCTAGGCCCAGGCTGGAGCCAGGCGCCCGATGTTaGCTATGTGTGGGGAGCAGT +
Preference number: 2 (lower is better)
Translates to: AAGLPGMWCHGSPRPRLEPGARC*LCVGSS
Trigger: ACTGCTCCCCACACATAGCCAACATCGGGCGCCTGG...CTCCAGCCTGGGCCTAGGGGAGCCATGACACCACATTCCGGGCAGCCCGGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674228.1
3UTR-3UTR GCA 90 bp GGCGGCCAAAGGCATCAGCCCCCACGGCCCCCAGGCTCCAAATCTCAGCCGATTCTGCACGTTGCGCTCTaGTGTCTCGGAGAGCAGGCC +
Preference number: 2 (lower is better)
Translates to: GGQRHQPPRPPGSKSQPILHVAL*CLGEQA
Trigger: GGCCTGCTCTCCGAGACAGCAGAGCGCAACGTGCAG...AATCGGCTGAGATTTGGAGCCTGGGGGCCGTGGGGGCTGATGCCTTTGGCCGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR GCA 90 bp GCCTGGGGACTGTGCAGGTTGGCTGGGCGGGAAAGTGTGTTTGGTGTATCGGGCGCTGAGGGCCCTGCCTaGATGTGGCGTCAGGGAGGC +
Preference number: 2 (lower is better)
Translates to: AWGLCRLAGRESVFGVSGAEGPA*MWRQGG
Trigger: GCCTCCCTGACGCCACATGCAGGCAGGGCCCTCAGC...GCCCGATACACCAAACACACTTTCCCGCCCAGCCAACCTGCACAGTCCCCAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR GCA 90 bp ATGGACAGGTGCTCATCTCTGCCCCTGGCCACCGGTGACCCGGCCATAGTCCCTCAGAGGCCTGCCTCCTaGTCTGTCCGCCGTGGACCT +
Preference number: 2 (lower is better)
Translates to: MDRCSSLPLATGDPAIVPQRPAS*SVRRGP
Trigger: AGGTCCACGGCGGACAGAGCAGGAGGCAGGCCTCTG...AGGGACTATGGCCGGGTCACCGGTGGCCAGGGGCAGAGATGAGCACCTGTCCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR GCA 90 bp CCCTGTGGGGGTGGCATATGGCTTACATGGACAGGTGCTCATCTCTGCCCCTGGGGGGTGGGCCTTCAGTaGGCAGCCCCTGGACCTGGG +
Preference number: 2 (lower is better)
Translates to: PCGGGIWLTWTGAHLCPWGVGLQ*AAPGPG
Trigger: CCCAGGTCCAGGGGCTGCGCACTGAAGGCCCACCCC...CCAGGGGCAGAGATGAGCACCTGTCCATGTAAGCCATATGCCACCCCCACAGGG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR CCA 90 bp ATCTTCCCAGGACTGTCCCTGGCTCTGCGGCGGCCAAAGGCATCAGCCCCCACGCAGGACACTGGCCACTaGCAGCAGAGCCCTGGCAGA +
Preference number: 2 (lower is better)
Translates to: IFPGLSLALRRPKASAPTQDTGH*QQSPGR
Trigger: TCTGCCAGGGCTCTGCTGCCAGTGGCCAGTGTCCTG...CGTGGGGGCTGATGCCTTTGGCCGCCGCAGAGCCAGGGACAGTCCTGGGAAGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR CCA 90 bp GGCGGCCAAAGGCATCAGCCCCCACGGCCCCCAGGCTCCAAATCTCAGCCGATTGCCGGTGCACACAAGTaGCTGCTGCTGGAGAGGCAG +
Preference number: 2 (lower is better)
Translates to: GGQRHQPPRPPGSKSQPIAGAHK*LLLERQ
Trigger: CTGCCTCTCCAGCAGCAGCCACTTGTGTGCACCGGC...AATCGGCTGAGATTTGGAGCCTGGGGGCCGTGGGGGCTGATGCCTTTGGCCGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR CCA 90 bp CTGATTTGCTGCATGGACCCGCTTCCTGGGGTGAGGCTCTGGGTCACTGGGCTGGGCAGATCCCTGCCCTaGGGACAGTCAGGCCGGTGC +
Preference number: 2 (lower is better)
Translates to: LICCMDPLPGVRLWVTGLGRSLP*GQSGRC
Trigger: GCACCGGCCTGACTGTCCCCAGGGCAGGGATCTGCC...CAGCCCAGTGACCCAGAGCCTCACCCCAGGAAGCGGGTCCATGCAGCAAATCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR CAA 90 bp CCACTGCCTGGGGACTGTGCAGGTTGGCTGGGCGGGAAAGTGTGTTaGGTGTATCGGGCAGTGGCTGCCAGTGGCAGGCCTAACGCCAGG +
Preference number: 2 (lower is better)
Translates to: PLPGDCAGWLGGKVC*VYRAVAASGRPNAR
Trigger: CCTGGCGTTAGGCCTGCCACTGGCAGCCACTGCCCGATACACCAAACACACTTTCCCGCCCAGCCAACCTGCACAGTCCCCAGGCAGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR GCA 90 bp GTGTGGCAGAAGCAGGCTCGGAGCCGGAGGAGGGTGGCTATCGGCTTTATTCTCTGGGACGGGAGAGTCTaGGCAGGACGGCACCGAGGG +
Preference number: 2 (lower is better)
Translates to: VWQKQARSRRRVAIGFILWDGRV*AGRHRG
Trigger: CCCTCGGTGCCGTCCTGCGCAGACTCTCCCGTCCCA...GAGAATAAAGCCGATAGCCACCCTCCTCCGGCTCCGAGCCTGCTTCTGCCACAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264202.8
ENST00000264203.7
ENST00000375142.5
3UTR-3UTR GCA 90 bp GGGAGGAGTCATCTTGAGCAGACCTGGCTGCCAGGGTTTCTACGCCAGGACGCCGAGTGGTATCGCCGCTaGAGAGGTCCACGCTGGCGG +
Preference number: 2 (lower is better)
Translates to: GRSHLEQTWLPGFLRQDAEWYRR*RGPRWR
Trigger: CCGCCAGCGTGGACCTCTGCAGCGGCGATACCACTC...GGCGTCCTGGCGTAGAAACCCTGGCAGCCAGGTCTGCTCAAGATGACTCCTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR GCA 90 bp AGGTCACCCCTTCCAAGCCAGCTAGCCCTGGACAGGCAATGTGCCGCTGAGCAGGAGTGGTATCGCCGCTaGAGAGGTCCACGCTGGCGG +
Preference number: 2 (lower is better)
Translates to: RSPLPSQLALDRQCAAEQEWYRR*RGPRWR
Trigger: CCGCCAGCGTGGACCTCTGCAGCGGCGATACCACTC...CTGCTCAGCGGCACATTGCCTGTCCAGGGCTAGCTGGCTTGGAAGGGGTGACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR CCA 90 bp CGGCCTCCGTGGGACGGGAGAGTCTGCGCAGGACGGCACCGAGGGCCACCTCTGATTCTCAGGGAGAGATaGCGCTGTGCGGTCAATGAT +
Preference number: 2 (lower is better)
Translates to: RPPWDGRVCAGRHRGPPLILRER*RCAVND
Trigger: ATCATTGACCGCACAGCGCCATCTCTCCCTGAGAAT...CAGAGGTGGCCCTCGGTGCCGTCCTGCGCAGACTCTCCCGTCCCACGGAGGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264202.8
ENST00000264203.7
ENST00000375142.5
3UTR-3UTR CCA 90 bp GGCGGCCAAAGGCATCAGCCCCCACGGCCCCCAGGCTCCAAATCTCAGCCGATTCTCTGGGGTGTGGAGTaGTATCGCCGCTGCAGAGGT +
Preference number: 2 (lower is better)
Translates to: GGQRHQPPRPPGSKSQPILWGVE*YRRCRG
Trigger: ACCTCTGCAGCGGCGATACCACTCCACACCCCAGAG...AATCGGCTGAGATTTGGAGCCTGGGGGCCGTGGGGGCTGATGCCTTTGGCCGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR CCA 90 bp CGGCGGGTTGGTGAGTCCTGTTTTAGTGGGGAGGGTCTCGCGGCTCTCAGGCAGATGCCGTGGCGGCTCTaGGGTGTGGAGTGGTATCGC +
Preference number: 2 (lower is better)
Translates to: RRVGESCFSGEGLAALRQMPWRL*GVEWYR
Trigger: GCGATACCACTCCACACCCCAGAGCCGCCACGGCAT...CTGCCTGAGAGCCGCGAGACCCTCCCCACTAAAACAGGACTCACCAACCCGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR CCA 90 bp TCTCACAGGCCGGGGACACCAGCCACTTTCCTGGCCCCTCAGGCAGCAGCTCAGAGTTCGACCCCCAACTaGGGGCAGGATGCTGTCGTC +
Preference number: 2 (lower is better)
Translates to: SHRPGTPATFLAPQAAAQSSTPN*GQDAVV
Trigger: GACGACAGCATCCTGCCCCCAGTTGGGGGTCGAACT...CTGAGCTGCTGCCTGAGGGGCCAGGAAAGTGGCTGGTGTCCCCGGCCTGTGAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR-3UTR TCA 90 bp GGCGGCCAAAGGCATCAGCCCCCACGGCCCCCAGGCTCCAAATCTCAGCCGATTACTGCAGCCTACCAATaGGGACACCGAGGCCCAAGA +
Preference number: 2 (lower is better)
Translates to: GGQRHQPPRPPGSKSQPITAAYQ*GHRGPR
Trigger: TCTTGGGCCTCGGTGTCCTCATTGGTAGGCTGCAGT...AATCGGCTGAGATTTGGAGCCTGGGGGCCGTGGGGGCTGATGCCTTTGGCCGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR TCA 90 bp GCCTGGCCCCACTGCCCCTGCACATGCAAGGTAAGGAAGGGCCTCCTGCCTCTCCACAATGGAGTGTGGTaGGGGCAGGGGCCTCATCTA +
Preference number: 2 (lower is better)
Translates to: AWPHCPCTCKVRKGLLPLHNGVW*GQGPHL
Trigger: TAGATGAGGCCCCTGCCCTCACCACACTCCATTGTG...GAGAGGCAGGAGGCCCTTCCTTACCTTGCATGTGCAGGGGCAGTGGGGCCAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR-3UTR GCA 90 bp AGGTCACCCCTTCCAAGCCAGCTAGCCCTGGACAGGCAATGTGCCGCTGAGCAGACTGAGGGCCCTGCCTaGACGTTGCGCTCTGCTGTC +
Preference number: 2 (lower is better)
Translates to: RSPLPSQLALDRQCAAEQTEGPA*TLRSAV
Trigger: GACAGCAGAGCGCAACGTGCAGGCAGGGCCCTCAGT...CTGCTCAGCGGCACATTGCCTGTCCAGGGCTAGCTGGCTTGGAAGGGGTGACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR GCA 90 bp TTTAGTGGGGAGGGTCTCGCGGCTCTCAGGCAGGGTACCTGGATCGGCTTAATTCCCGGGACTGCAGCCTaGCTCTCCTCTGGGCTGGGC +
Preference number: 2 (lower is better)
Translates to: FSGEGLAALRQGTWIGLIPGTAA*LSSGLG
Trigger: GCCCAGCCCAGAGGAGAGGCAGGCTGCAGTCCCGGG...AATTAAGCCGATCCAGGTACCCTGCCTGAGAGCCGCGAGACCCTCCCCACTAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR CCA 90 bp CGGCCTCCGTGGGACGGGAGAGTCTGCGCAGGACGGCACCGAGGGCCACCTCTGGTCTCTATGGAAATGTaGAGAGAACTGAGAGCGAGG +
Preference number: 2 (lower is better)
Translates to: RPPWDGRVCAGRHRGPPLVSMEM*RELRAR
Trigger: CCTCGCTCTCAGTTCTCTCCACATTTCCATAGAGAC...CAGAGGTGGCCCTCGGTGCCGTCCTGCGCAGACTCTCCCGTCCCACGGAGGCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264202.8
ENST00000264203.7
ENST00000375142.5
3UTR-3UTR CCA 90 bp GGTCACGAAGACCAAGCCTCCCCCAGGTGGGCAGGGGATCAGAAGACAAGGGTCCTGGCAGCAGAGCCCTaGCAGAGGACGTCAGAGAGG +
Preference number: 2 (lower is better)
Translates to: GHEDQASPRWAGDQKTRVLAAEP*QRTSER
Trigger: CCTCTCTGACGTCCTCTGCCAGGGCTCTGCTGCCAG...GACCCTTGTCTTCTGATCCCCTGCCCACCTGGGGGAGGCTTGGTCTTCGTGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR CCA 90 bp GGTCACGAAGACCAAGCCTCCCCCAGGTGGGCAGGGGATCAGAAGACAAGGGTCGATGGTGCAGGACACTaGCCACTGGCAGCAGAGCCC +
Preference number: 2 (lower is better)
Translates to: GHEDQASPRWAGDQKTRVDGAGH*PLAAEP
Trigger: GGGCTCTGCTGCCAGTGGCCAGTGTCCTGCACCATC...GACCCTTGTCTTCTGATCCCCTGCCCACCTGGGGGAGGCTTGGTCTTCGTGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR CCA 90 bp GGCGGCCAAAGGCATCAGCCCCCACGGCCCCCAGGCTCCAAATCTCAGCCGATTCGCCCGGCTTTTGTTTaGGCTGACACTGCAGAGCTG +
Preference number: 2 (lower is better)
Translates to: GGQRHQPPRPPGSKSQPIRPAFV*ADTAEL
Trigger: CAGCTCTGCAGTGTCAGCCCAAACAAAAGCCGGGCG...AATCGGCTGAGATTTGGAGCCTGGGGGCCGTGGGGGCTGATGCCTTTGGCCGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR CCA 90 bp GGCCAAAGGCATCAGCCCCCACGGCCCCCAGGCTCCAAATCTCAGCCGATTCCCTTTACTGCCCCCAGCTaGGCTCTGGCCTCATGTCAG +
Preference number: 2 (lower is better)
Translates to: GQRHQPPRPPGSKSQPIPFTAPS*ALASCQ
Trigger: CTGACATGAGGCCAGAGCCCAGCTGGGGGCAGTAAA...GGGAATCGGCTGAGATTTGGAGCCTGGGGGCCGTGGGGGCTGATGCCTTTGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR CCA 90 bp GGCGGGTTGGTGAGTCCTGTTTTAGTGGGGAGGGTCTCGCGGCTCTCAGGCAGGAGGTGCCGTGTTACATaGGGCCGAGGCTACACGGGA +
Preference number: 2 (lower is better)
Translates to: GGLVSPVLVGRVSRLSGRRCRVT*GRGYTG
Trigger: TCCCGTGTAGCCTCGGCCCCATGTAACACGGCACCT...CCTGCCTGAGAGCCGCGAGACCCTCCCCACTAAAACAGGACTCACCAACCCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR CCA 90 bp CTTCCCAGGACTGTCCCTGGCTCTGCGGCGGCCAAAGGCATCAGCCCCCACGGCAGCCTCCACCCAGAGTaGAAAGCACACACACGTGAT +
Preference number: 2 (lower is better)
Translates to: LPRTVPGSAAAKGISPHGSLHPE*KAHTRD
Trigger: ATCACGTGTGTGTGCTTTCCACTCTGGGTGGAGGCT...GCCGTGGGGGCTGATGCCTTTGGCCGCCGCAGAGCCAGGGACAGTCCTGGGAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR CCA 90 bp TTAACTTGGCCCAGAAAACCCCTCAGCCCGGATTGCAAAGGGCGGCACAGGACACCAGGACGCCCCCAGTaGGCGGCCAGGGAACTGCAC +
Preference number: 2 (lower is better)
Translates to: LTWPRKPLSPDCKGRHRTPGRPQ*AARELH
Trigger: GTGCAGTTCCCTGGCCGCCCACTGGGGGCGTCCTGG...TGTCCTGTGCCGCCCTTTGCAATCCGGGCTGAGGGGTTTTCTGGGCCAAGTTAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR CCA 90 bp GCCTGGCCCCACTGCCCCTGCACATGCAAGGTAAGGAAGGGCCTCCTGCCTCTCTACGAGGTGCATCCCTaGTACTCAGCAAGCACCCGG +
Preference number: 2 (lower is better)
Translates to: AWPHCPCTCKVRKGLLPLYEVHP*YSASTR
Trigger: CCGGGTGCTTGCTGAGTACCAGGGATGCACCTCGTA...GAGAGGCAGGAGGCCCTTCCTTACCTTGCATGTGCAGGGGCAGTGGGGCCAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR CAA 90 bp TTCATGCCTCTGGTATCCCGGATGGCAGCTCCAACTGCTGTCCCTTaGGTGGTCTGCGGTCCCTGTCACCCAGGAAGAGCCTGGCCCCAC +
Preference number: 2 (lower is better)
Translates to: FMPLVSRMAAPTAVP*VVCGPCHPGRAWPH
Trigger: GTGGGGCCAGGCTCTTCCTGGGTGACAGGGACCGCAGACCACCAAAGGGACAGCAGTTGGAGCTGCCATCCGGGATACCAGAGGCATGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR-3UTR TCA 90 bp GCGGCCTCCGTGGGACGGGAGAGTCTGCGCAGGACGGCACCGAGGGCCACCTCTCGTGTCTGGTTAGCATaGAACAGAGGTTTAGCATTG +
Preference number: 2 (lower is better)
Translates to: AASVGRESLRRTAPRATSRVWLA*NRGLAL
Trigger: CAATGCTAAACCTCTGTTTCATGCTAACCAGACACG...AGAGGTGGCCCTCGGTGCCGTCCTGCGCAGACTCTCCCGTCCCACGGAGGCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264203.7
ENST00000375142.5
3UTR-3UTR TCA 90 bp GGGAGGAGTCATCTTGAGCAGACCTGGCTGCCAGGGTTTCTACGCCAGGACGCCAGGGAGGAGTCATCTTaGGCAGACCTGGCTGCCAGG +
Preference number: 2 (lower is better)
Translates to: GRSHLEQTWLPGFLRQDAREESS*ADLAAR
Trigger: CCTGGCAGCCAGGTCTGCTCAAGATGACTCCTCCCT...GGCGTCCTGGCGTAGAAACCCTGGCAGCCAGGTCTGCTCAAGATGACTCCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR GCA 90 bp CAGCTCGGGATGACAGAGCTTAGGGGAGATCCCGGCCTCCTGACTCTCCTGACTCAGAGGCAGCCGGGCTaGCCGGAATGTGGTGTCATG +
Preference number: 2 (lower is better)
Translates to: QLGMTELRGDPGLLTLLTQRQPG*PECGVM
Trigger: CATGACACCACATTCCGGGCAGCCCGGCTGCCTCTG...AGTCAGGAGAGTCAGGAGGCCGGGATCTCCCCTAAGCTCTGTCATCCCGAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR GCA 90 bp ACAGGTCACGAAGACCAAGCCTCCCCCAGGTGGGCAGGGGATCAGAAGACAAGGGCCCTGCCTGCACGTTaGGCTCTGCTGTCTCGGAGA +
Preference number: 2 (lower is better)
Translates to: TGHEDQASPRWAGDQKTRALPAR*ALLSRR
Trigger: TCTCCGAGACAGCAGAGCGCAACGTGCAGGCAGGGC...CCTTGTCTTCTGATCCCCTGCCCACCTGGGGGAGGCTTGGTCTTCGTGACCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR GCA 90 bp GTGCACCGACCGGGAGCACACGTGGGGGTTAGTGGTGGTTTAAATGGCCGCGGACATCTCAGCCGACCGTaGCTCCTCGACTGGACAAGG +
Preference number: 2 (lower is better)
Translates to: VHRPGAHVGVSGGLNGRGHLSRP*LLDWTR
Trigger: CCTTGTCCAGTCGAGGAGGCACGGTCGGCTGAGATG...TCCGCGGCCATTTAAACCACCACTAACCCCCACGTGTGCTCCCGGTCGGTGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR GCA 90 bp GGAGGTCAACATGGCCAGCGGGAGATGCGGCGGGCAAAGCAGCAGCGCACAGGACACACACGTGATAGGTaGCGTGTTACATGGGGCCGA +
Preference number: 2 (lower is better)
Translates to: GGQHGQREMRRAKQQRTGHTRDR*RVTWGR
Trigger: TCGGCCCCATGTAACACGGCACCTATCACGTGTGTG...TCCTGTGCGCTGCTGCTTTGCCCGCCGCATCTCCCGCTGGCCATGTTGACCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR GCA 90 bp GGGAGGAGTCATCTTGAGCAGACCTGGCTGCCAGGGTTTCTACGCCAGGACGCCGGACAGTCAGGCCGGTaGACACAAGTGGCTGCTGCT +
Preference number: 2 (lower is better)
Translates to: GRSHLEQTWLPGFLRQDAGQSGR*TQVAAA
Trigger: AGCAGCAGCCACTTGTGTGCACCGGCCTGACTGTCC...GGCGTCCTGGCGTAGAAACCCTGGCAGCCAGGTCTGCTCAAGATGACTCCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR GCA 90 bp GGGAGGAGTCATCTTGAGCAGACCTGGCTGCCAGGGTTTCTACGCCAGGACGCCGGCTTCTGGGATCCCTaGACCAGCATCAGAGGCTCC +
Preference number: 2 (lower is better)
Translates to: GRSHLEQTWLPGFLRQDAGFWDP*TSIRGS
Trigger: GGAGCCTCTGATGCTGGTGCAGGGATCCCAGAAGCC...GGCGTCCTGGCGTAGAAACCCTGGCAGCCAGGTCTGCTCAAGATGACTCCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR GCA 90 bp GGGAGGAGTCATCTTGAGCAGACCTGGCTGCCAGGGTTTCTACGCCAGGACGCCCCTTGGAAAGTCTGCTaGACCCCTTCTGGGGTGGGC +
Preference number: 2 (lower is better)
Translates to: GRSHLEQTWLPGFLRQDAPWKVC*TPSGVG
Trigger: GCCCACCCCAGAAGGGGTGCAGCAGACTTTCCAAGG...GGCGTCCTGGCGTAGAAACCCTGGCAGCCAGGTCTGCTCAAGATGACTCCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR CCA 90 bp CGTGGGACGGGAGAGTCTGCGCAGGACGGCACCGAGGGCCACCTCTGCTCCCAGGTCTCTATGGAAATGTaGAGAGAACTGAGAGCGAGG +
Preference number: 2 (lower is better)
Translates to: RGTGESAQDGTEGHLCSQVSMEM*RELRAR
Trigger: CCTCGCTCTCAGTTCTCTCCACATTTCCATAGAGAC...CTGGGAGCAGAGGTGGCCCTCGGTGCCGTCCTGCGCAGACTCTCCCGTCCCACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264202.8
ENST00000264203.7
ENST00000375142.5
3UTR-3UTR CCA 90 bp CCCTGTGGGGGTGGCATATGGCTTACATGGACAGGTGCTCATCTCTGCCCCTGGCTGGCAGCAGAGCCCTaGCAGAGGACGTCAGAGAGG +
Preference number: 2 (lower is better)
Translates to: PCGGGIWLTWTGAHLCPWLAAEP*QRTSER
Trigger: CCTCTCTGACGTCCTCTGCCAGGGCTCTGCTGCCAG...CCAGGGGCAGAGATGAGCACCTGTCCATGTAAGCCATATGCCACCCCCACAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR CCA 90 bp TCATGTCAGAGGCCTGCCTCCTGCTCTGTCCGCCGTGGACCTGGAGGGTCCAGAACGAGGTGGGAAGGATaGTGCAGGACACTGGCCACT +
Preference number: 2 (lower is better)
Translates to: SCQRPASCSVRRGPGGSRTRWEG*CRTLAT
Trigger: AGTGGCCAGTGTCCTGCACCATCCTTCCCACCTCGT...TCTGGACCCTCCAGGTCCACGGCGGACAGAGCAGGAGGCAGGCCTCTGACATGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR CCA 90 bp GTAGAGGGCTGCTCAAGAAGAGTGCTACGGAGAGTGCACTCAGCCGGACTCTCATGTCCGCCGTGGACCTaGAGGGTCCAGAGAGCGCCC +
Preference number: 2 (lower is better)
Translates to: VEGCSRRVLRRVHSAGLSCPPWT*RVQRAP
Trigger: GGGCGCTCTCTGGACCCTCCAGGTCCACGGCGGACA...TGAGAGTCCGGCTGAGTGCACTCTCCGTAGCACTCTTCTTGAGCAGCCCTCTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR CCA 90 bp CAGTGGAAAGAGTGGGTAGAGGGCTGCTCAAGAAGAGTGCTACGGAGAGTGCACCCCCAGTCCACGAGCTaGGGCAGCCCCGGGACTGCA +
Preference number: 2 (lower is better)
Translates to: QWKEWVEGCSRRVLRRVHPQSTS*GSPGTA
Trigger: TGCAGTCCCGGGGCTGCCCCAGCTCGTGGACTGGGG...GTGCACTCTCCGTAGCACTCTTCTTGAGCAGCCCTCTACCCACTCTTTCCACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR CCA 90 bp CTTGCCAGGCCCTGTGGGGGTGGCATATGGCTTACATGGACAGGTGCTCATCTCCGCTGGCGGTGGTCGTaGTATTCAGGGGCTCGCCAC +
Preference number: 2 (lower is better)
Translates to: LARPCGGGIWLTWTGAHLRWRWS*YSGARH
Trigger: GTGGCGAGCCCCTGAATACCACGACCACCGCCAGCG...GAGATGAGCACCTGTCCATGTAAGCCATATGCCACCCCCACAGGGCCTGGCAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR CCA 90 bp CCCTGTGGGGGTGGCATATGGCTTACATGGACAGGTGCTCATCTCTGCCCCTGGGGCTACACGGGAATGTaGCTGTGCACCGACCGGGAG +
Preference number: 2 (lower is better)
Translates to: PCGGGIWLTWTGAHLCPWGYTGM*LCTDRE
Trigger: CTCCCGGTCGGTGCACAGCCACATTCCCGTGTAGCC...CCAGGGGCAGAGATGAGCACCTGTCCATGTAAGCCATATGCCACCCCCACAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR CCA 90 bp AGGCCCTGTGGGGGTGGCATATGGCTTACATGGACAGGTGCTCATCTCTGCCCCGCCGGTGCACACAAGTaGCTGCTGCTGGAGAGGCAG +
Preference number: 2 (lower is better)
Translates to: RPCGGGIWLTWTGAHLCPAGAHK*LLLERQ
Trigger: CTGCCTCTCCAGCAGCAGCCACTTGTGTGCACCGGC...GGGGCAGAGATGAGCACCTGTCCATGTAAGCCATATGCCACCCCCACAGGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR CCA 90 bp GGAAGGAAGAGCCAAGCCCGCCAGGTCTTGGCTGGATCACACGAAGGAGAAAGTGGCAGATCCCTGCCCTaGGGACAGTCAGGCCGGTGC +
Preference number: 2 (lower is better)
Translates to: GRKSQARQVLAGSHEGESGRSLP*GQSGRC
Trigger: GCACCGGCCTGACTGTCCCCAGGGCAGGGATCTGCC...ACTTTCTCCTTCGTGTGATCCAGCCAAGACCTGGCGGGCTTGGCTCTTCCTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR CCA 90 bp GCCTGGCCCCACTGCCCCTGCACATGCAAGGTAAGGAAGGGCCTCCTGCCTCTCGGACTGCACTTATCTTaGCCTGAGAGCAGCTGGAGG +
Preference number: 2 (lower is better)
Translates to: AWPHCPCTCKVRKGLLPLGLHLS*PESSWR
Trigger: CCTCCAGCTGCTCTCAGGCCAAGATAAGTGCAGTCC...GAGAGGCAGGAGGCCCTTCCTTACCTTGCATGTGCAGGGGCAGTGGGGCCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR-3UTR CCA 90 bp TCTCACAGGCCGGGGACACCAGCCACTTTCCTGGCCCCTCAGGCAGCAGCTCAGTTGGTGCTGTGGTGCTaGGAGGCAGGATTAGACGGA +
Preference number: 2 (lower is better)
Translates to: SHRPGTPATFLAPQAAAQLVLWC*EAGLDG
Trigger: TCCGTCTAATCCTGCCTCCCAGCACCACAGCACCAA...CTGAGCTGCTGCCTGAGGGGCCAGGAAAGTGGCTGGTGTCCCCGGCCTGTGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR CAA 90 bp TTAAAGGAACAGCTGCAGCTCGTTAGGGGCGGAAGGTTATGCTGGTaGTGGCCGAGTCGGCACTGGGCGTCCAGGCAGCTCCAGCAGAGC +
Preference number: 2 (lower is better)
Translates to: LKEQLQLVRGGRLCW*WPSRHWASRQLQQS
Trigger: GCTCTGCTGGAGCTGCCTGGACGCCCAGTGCCGACTCGGCCACAACCAGCATAACCTTCCGCCCCTAACGAGCTGCAGCTGTTCCTTTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR TCA 90 bp GCTGATTTGCTGCATGGACCCGCTTCCTGGGGTGAGGCTCTGGGTCACTGGGCTGATGCAGCTGTTATGTaGCCTGTCGGGGAGGGAAGG +
Preference number: 2 (lower is better)
Translates to: ADLLHGPASWGEALGHWADAAVM*PVGEGR
Trigger: CCTTCCCTCCCCGACAGGTCACATAACAGCTGCATC...AGCCCAGTGACCCAGAGCCTCACCCCAGGAAGCGGGTCCATGCAGCAAATCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR GCA 90 bp GAGTGGGTAGAGGGCTGCTCAAGAAGAGTGCTACGGAGAGTGCACTCAGCCGGAACGGGAATGTGGCTGTaGACCGACCGGGAGCACACG +
Preference number: 2 (lower is better)
Translates to: EWVEGCSRRVLRRVHSAGTGMWL*TDREHT
Trigger: CGTGTGCTCCCGGTCGGTGCACAGCCACATTCCCGT...TCCGGCTGAGTGCACTCTCCGTAGCACTCTTCTTGAGCAGCCCTCTACCCACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR GCA 90 bp GGGAGGAGTCATCTTGAGCAGACCTGGCTGCCAGGGTTTCTACGCCAGGACGCCGGGCGGCCAGGGAACTaGACCATCACGGTGTATCTT +
Preference number: 2 (lower is better)
Translates to: GRSHLEQTWLPGFLRQDAGRPGN*TITVYL
Trigger: AAGATACACCGTGATGGTGCAGTTCCCTGGCCGCCC...GGCGTCCTGGCGTAGAAACCCTGGCAGCCAGGTCTGCTCAAGATGACTCCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR GCA 90 bp CTGATTTGCTGCATGGACCCGCTTCCTGGGGTGAGGCTCTGGGTCACTGGGCTGTACATGGCCGAGACCTaGACCCTCTGCACCTTGCCA +
Preference number: 2 (lower is better)
Translates to: LICCMDPLPGVRLWVTGLYMAET*TLCTLP
Trigger: TGGCAAGGTGCAGAGGGTGCAGGTCTCGGCCATGTA...CAGCCCAGTGACCCAGAGCCTCACCCCAGGAAGCGGGTCCATGCAGCAAATCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR GCA 90 bp GCCTGGCCCCACTGCCCCTGCACATGCAAGGTAAGGAAGGGCCTCCTGCCTCTCAAGAGGCTGAGGGTGTaGACTTGCTGGTTGACAGCT +
Preference number: 2 (lower is better)
Translates to: AWPHCPCTCKVRKGLLPLKRLRV*TCWLTA
Trigger: AGCTGTCAACCAGCAAGTGCACACCCTCAGCCTCTT...GAGAGGCAGGAGGCCCTTCCTTACCTTGCATGTGCAGGGGCAGTGGGGCCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR-3UTR GCA 90 bp GTGTGGCAGAAGCAGGCTCGGAGCCGGAGGAGGGTGGCTATCGGCTTTATTCTCCTGCAGACATCATGCTaGCCCGATGGGGGTGGCGAT +
Preference number: 2 (lower is better)
Translates to: VWQKQARSRRRVAIGFILLQTSC*PDGGGD
Trigger: ATCGCCACCCCCATCGGGGCAGCATGATGTCTGCAG...GAGAATAAAGCCGATAGCCACCCTCCTCCGGCTCCGAGCCTGCTTCTGCCACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR-3UTR CCA 90 bp GCCCGCCAGGTCTTGGCTGGATCACACGAAGGAGAAAGTTCCAGAGCTAGAATCGGACGTCAGAGAGGCTaGGGCCCCCTGAGAACGCCC +
Preference number: 2 (lower is better)
Translates to: ARQVLAGSHEGESSRARIGRQRG*GPLRTP
Trigger: GGGCGTTCTCAGGGGGCCCCAGCCTCTCTGACGTCC...GATTCTAGCTCTGGAACTTTCTCCTTCGTGTGATCCAGCCAAGACCTGGCGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR CCA 90 bp GGGAAACGTTCAGGGCGACCGCATTCACGTATGTGTGGGGACGCTCATCAACAATGTCCGCCGTGGACCTaGAGGGTCCAGAGAGCGCCC +
Preference number: 2 (lower is better)
Translates to: GKRSGRPHSRMCGDAHQQCPPWT*RVQRAP
Trigger: GGGCGCTCTCTGGACCCTCCAGGTCCACGGCGGACA...TTGTTGATGAGCGTCCCCACACATACGTGAATGCGGTCGCCCTGAACGTTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR CCA 90 bp ATGGACAGGTGCTCATCTCTGCCCCTGGCCACCGGTGACCCGGCCATAGTCCCTACTGTGCAGGTTGGCTaGGCGGGAAAGTGTGTTTGG +
Preference number: 2 (lower is better)
Translates to: MDRCSSLPLATGDPAIVPTVQVG*AGKCVW
Trigger: CCAAACACACTTTCCCGCCCAGCCAACCTGCACAGT...AGGGACTATGGCCGGGTCACCGGTGGCCAGGGGCAGAGATGAGCACCTGTCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR CCA 90 bp AGGCCCTGTGGGGGTGGCATATGGCTTACATGGACAGGTGCTCATCTCTGCCCCGCGGGGAGGCTTATGTaGCTTCTGGGATCCCTGCAC +
Preference number: 2 (lower is better)
Translates to: RPCGGGIWLTWTGAHLCPAGRLM*LLGSLH
Trigger: GTGCAGGGATCCCAGAAGCCACATAAGCCTCCCCGC...GGGGCAGAGATGAGCACCTGTCCATGTAAGCCATATGCCACCCCCACAGGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR CCA 90 bp GTTCAGGGCGACCGCATTCACGTATGTGTGGGGACGCTCATCAACAAAGCCAGATGGCCGAGTCGGCACTaGGCGTCCAGGCAGCTCCAG +
Preference number: 2 (lower is better)
Translates to: VQGDRIHVCVGTLINKARWPSRH*ASRQLQ
Trigger: CTGGAGCTGCCTGGACGCCCAGTGCCGACTCGGCCA...TCTGGCTTTGTTGATGAGCGTCCCCACACATACGTGAATGCGGTCGCCCTGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR CCA 90 bp GGACTGTCCCTGGCTCTGCGGCGGCCAAAGGCATCAGCCCCCACGGCCCCCAGGTCAAGTCATGGTTCTTaGCCATTACCAACAAGCAAG +
Preference number: 2 (lower is better)
Translates to: GLSLALRRPKASAPTAPRSSHGS*PLPTSK
Trigger: CTTGCTTGTTGGTAATGGCCAAGAACCATGACTTGA...CCTGGGGGCCGTGGGGGCTGATGCCTTTGGCCGCCGCAGAGCCAGGGACAGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR CCA 90 bp TCCATCTGTCTGGTAAGGCTGCCTCCGAGGTTCATGGTGCCAGAGCCAGATTTGCGCAGCCCCTGGACCTaGGCTCTGCAGCCCCAGTTG +
Preference number: 2 (lower is better)
Translates to: SICLVRLPPRFMVPEPDLRSPWT*ALQPQL
Trigger: CAACTGGGGCTGCAGAGCCCAGGTCCAGGGGCTGCG...CAAATCTGGCTCTGGCACCATGAACCTCGGAGGCAGCCTTACCAGACAGATGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674228.1
3UTR-3UTR CCA 90 bp GAGGTAGACAAGGCCCCAGGTGGCCTCCACACAGCCGGTGAAGGGAGCTGGTGCGCCACAGCATCACCGTaGAGGTCAACTTGTAATGGG +
Preference number: 2 (lower is better)
Translates to: EVDKAPGGLHTAGEGSWCATASP*RSTCNG
Trigger: CCCATTACAAGTTGACCTCCACGGTGATGCTGTGGC...GCACCAGCTCCCTTCACCGGCTGTGTGGAGGCCACCTGGGGCCTTGTCTACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR CAA 90 bp CCTGATGGCCACACTGTGAGGCTGACCCGAGTCGTGGGCCTTAAGTaGGCACACACAGACCAGACTGGTGCACTTAAGTCCCACGGCCTC +
Preference number: 2 (lower is better)
Translates to: PDGHTVRLTRVVGLK*AHTDQTGALKSHGL
Trigger: GAGGCCGTGGGACTTAAGTGCACCAGTCTGGTCTGTGTGTGCCAACTTAAGGCCCACGACTCGGGTCAGCCTCACAGTGTGGCCATCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR CAA 90 bp GTGCTGGGAACAGAACGGCACCAGCCTGGATCCCACTACACACTGTaGCAGACCCTCGGGGTCTGGGTTATCCAGTTCGACCCCCAACTG +
Preference number: 2 (lower is better)
Translates to: VLGTERHQPGSHYTL*QTLGVWVIQFDPQL
Trigger: CAGTTGGGGGTCGAACTGGATAACCCAGACCCCGAGGGTCTGCAACAGTGTGTAGTGGGATCCAGGCTGGTGCCGTTCTGTTCCCAGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR-3UTR TCA 90 bp CCTGTCACAGGTCACGAAGACCAAGCCTCCCCCAGGTGGGCAGGGGATCAGAAGTTTTTGAGCGGGGACTaGCAAACTGCAGGGCTGAGG +
Preference number: 2 (lower is better)
Translates to: PVTGHEDQASPRWAGDQKFLSGD*QTAGLR
Trigger: CCTCAGCCCTGCAGTTTGTCAGTCCCCGCTCAAAAA...CTTCTGATCCCCTGCCCACCTGGGGGAGGCTTGGTCTTCGTGACCTGTGACAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR TCA 90 bp GTAGAGGGCTGCTCAAGAAGAGTGCTACGGAGAGTGCACTCAGCCGGACTCTCACAGGCAATGTGCCGCTaGGCAGCGGGGAGGCTTATG +
Preference number: 2 (lower is better)
Translates to: VEGCSRRVLRRVHSAGLSQAMCR*AAGRLM
Trigger: CATAAGCCTCCCCGCTGCTCAGCGGCACATTGCCTG...TGAGAGTCCGGCTGAGTGCACTCTCCGTAGCACTCTTCTTGAGCAGCCCTCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR TCA 90 bp CTGATTTGCTGCATGGACCCGCTTCCTGGGGTGAGGCTCTGGGTCACTGGGCTGCAACAGCACCCAGACTaGGTTCTGGCTACCGAATCC +
Preference number: 2 (lower is better)
Translates to: LICCMDPLPGVRLWVTGLQQHPD*VLATES
Trigger: GGATTCGGTAGCCAGAACTCAGTCTGGGTGCTGTTG...CAGCCCAGTGACCCAGAGCCTCACCCCAGGAAGCGGGTCCATGCAGCAAATCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR GCA 90 bp AGAGCGAGGTGTGGCAGAAGCAGGCTCGGAGCCGGAGGAGGGTGGCTATCGGCTAAGGAATCTAACGAGTaGACGGCGTGTCTGGTTAGC +
Preference number: 2 (lower is better)
Translates to: RARCGRSRLGAGGGWLSAKESNE*TACLVS
Trigger: GCTAACCAGACACGCCGTGCACTCGTTAGATTCCTT...AGCCGATAGCCACCCTCCTCCGGCTCCGAGCCTGCTTCTGCCACACCTCGCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264202.8
ENST00000264203.7
ENST00000375142.5
ENST00000375144.6
ENST00000674449.1
3UTR-3UTR GCA 90 bp GTAGAGGGCTGCTCAAGAAGAGTGCTACGGAGAGTGCACTCAGCCGGACTCTCACTGGACAAGGGCCTCTaGGAGGAGTGCCAGAGGCCA +
Preference number: 2 (lower is better)
Translates to: VEGCSRRVLRRVHSAGLSLDKGL*EECQRP
Trigger: TGGCCTCTGGCACTCCTCGCAGAGGCCCTTGTCCAG...TGAGAGTCCGGCTGAGTGCACTCTCCGTAGCACTCTTCTTGAGCAGCCCTCTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR GCA 90 bp CGCCAGGTCTTGGCTGGATCACACGAAGGAGAAAGTTCCAGAGCTAGAATCATGCCCGGGACTGCAGCCTaGCTCTCCTCTGGGCTGGGC +
Preference number: 2 (lower is better)
Translates to: RQVLAGSHEGESSRARIMPGTAA*LSSGLG
Trigger: GCCCAGCCCAGAGGAGAGGCAGGCTGCAGTCCCGGG...CATGATTCTAGCTCTGGAACTTTCTCCTTCGTGTGATCCAGCCAAGACCTGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR GCA 90 bp CCCTGTGGGGGTGGCATATGGCTTACATGGACAGGTGCTCATCTCTGCCCCTGGAGCGCTTGGAGACAGTaGTCGACTCTGTGGGAGGGA +
Preference number: 2 (lower is better)
Translates to: PCGGGIWLTWTGAHLCPWSAWRQ*STLWEG
Trigger: TCCCTCCCACAGAGTCGAGCACTGTCTCCAAGCGCT...CCAGGGGCAGAGATGAGCACCTGTCCATGTAAGCCATATGCCACCCCCACAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR GCA 90 bp GTAGAGGGCTGCTCAAGAAGAGTGCTACGGAGAGTGCACTCAGCCGGACTCTCAGACTGTCCCTGGCTCTaGGGCGGCCAAAGGCATCAG +
Preference number: 2 (lower is better)
Translates to: VEGCSRRVLRRVHSAGLSDCPWL*GGQRHQ
Trigger: CTGATGCCTTTGGCCGCCGCAGAGCCAGGGACAGTC...TGAGAGTCCGGCTGAGTGCACTCTCCGTAGCACTCTTCTTGAGCAGCCCTCTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR GCA 90 bp GAGAAAGGGATGGCCTACTGCCTCTCCACCCCATGGAACAGCCTGGTCCCTAGAGTCCCTTTGGTGGTCTaGGGTCCCTGTCACCCAGGA +
Preference number: 2 (lower is better)
Translates to: EKGMAYCLSTPWNSLVPRVPLVV*GPCHPG
Trigger: TCCTGGGTGACAGGGACCGCAGACCACCAAAGGGAC...TCTAGGGACCAGGCTGTTCCATGGGGTGGAGAGGCAGTAGGCCATCCCTTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR-3UTR GCA 90 bp TCTCACAGGCCGGGGACACCAGCCACTTTCCTGGCCCCTCAGGCAGCAGCTCAGTCTCAGAATGACCCTTaGCTGAACCCATCTGCCAAC +
Preference number: 2 (lower is better)
Translates to: SHRPGTPATFLAPQAAAQSQNDP*LNPSAN
Trigger: GTTGGCAGATGGGTTCAGGCAAGGGTCATTCTGAGA...CTGAGCTGCTGCCTGAGGGGCCAGGAAAGTGGCTGGTGTCCCCGGCCTGTGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR-3UTR CCA 90 bp ATCTTCCCAGGACTGTCCCTGGCTCTGCGGCGGCCAAAGGCATCAGCCCCCACGATTCTCAGGGAGAGATaGCGCTGTGCGGTCAATGAT +
Preference number: 2 (lower is better)
Translates to: IFPGLSLALRRPKASAPTILRER*RCAVND
Trigger: ATCATTGACCGCACAGCGCCATCTCTCCCTGAGAAT...CGTGGGGGCTGATGCCTTTGGCCGCCGCAGAGCCAGGGACAGTCCTGGGAAGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR CCA 90 bp CAGCTCGGGATGACAGAGCTTAGGGGAGATCCCGGCCTCCTGACTCTCCTGACTTTTACTGCCCCCAGCTaGGCTCTGGCCTCATGTCAG +
Preference number: 2 (lower is better)
Translates to: QLGMTELRGDPGLLTLLTFTAPS*ALASCQ
Trigger: CTGACATGAGGCCAGAGCCCAGCTGGGGGCAGTAAA...AGTCAGGAGAGTCAGGAGGCCGGGATCTCCCCTAAGCTCTGTCATCCCGAGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR CCA 90 bp TCTCGCGGCTCTCAGGCAGGGTACCTGGATCGGCTTAATTATCAGGCTGGATGTCGCTGGCGGTGGTCGTaGTATTCAGGGGCTCGCCAC +
Preference number: 2 (lower is better)
Translates to: SRGSQAGYLDRLNYQAGCRWRWS*YSGARH
Trigger: GTGGCGAGCCCCTGAATACCACGACCACCGCCAGCG...ACATCCAGCCTGATAATTAAGCCGATCCAGGTACCCTGCCTGAGAGCCGCGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR CCA 90 bp ATATGGCTTACATGGACAGGTGCTCATCTCTGCCCCTGGCCACCGGTGACCCGGGCAGCATCCGTCCCTTaGCCTGGGCTTCTTCAGAAG +
Preference number: 2 (lower is better)
Translates to: IWLTWTGAHLCPWPPVTRAASVP*PGLLQK
Trigger: CTTCTGAAGAAGCCCAGGCCAAGGGACGGATGCTGC...CCGGGTCACCGGTGGCCAGGGGCAGAGATGAGCACCTGTCCATGTAAGCCATAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR CCA 90 bp GTAGAGGGCTGCTCAAGAAGAGTGCTACGGAGAGTGCACTCAGCCGGACTCTCACTCCAGCAGAGCATCTaGGCCAGCCAGGGTGGAGTC +
Preference number: 2 (lower is better)
Translates to: VEGCSRRVLRRVHSAGLSLQQSI*ASQGGV
Trigger: GACTCCACCCTGGCTGGCCCAGATGCTCTGCTGGAG...TGAGAGTCCGGCTGAGTGCACTCTCCGTAGCACTCTTCTTGAGCAGCCCTCTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR CCA 90 bp CTTCCCAGGACTGTCCCTGGCTCTGCGGCGGCCAAAGGCATCAGCCCCCACGGCCACAAGCTCAAGTCATaGTTCTTGGCCATTACCAAC +
Preference number: 2 (lower is better)
Translates to: LPRTVPGSAAAKGISPHGHKLKS*FLAITN
Trigger: GTTGGTAATGGCCAAGAACCATGACTTGAGCTTGTG...GCCGTGGGGGCTGATGCCTTTGGCCGCCGCAGAGCCAGGGACAGTCCTGGGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR CCA 90 bp ACAAGTGCAAGGTGCAGCGTTATCCCACCCTTGGGAGTGGGTAAGAACCAGTGTTCAGTGCGCAGCCCCTaGACCTGGGCTCTGCAGCCC +
Preference number: 2 (lower is better)
Translates to: TSARCSVIPPLGVGKNQCSVRSP*TWALQP
Trigger: GGGCTGCAGAGCCCAGGTCCAGGGGCTGCGCACTGA...ACACTGGTTCTTACCCACTCCCAAGGGTGGGATAACGCTGCACCTTGCACTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR CCA 90 bp ACAAGTGCAAGGTGCAGCGTTATCCCACCCTTGGGAGTGGGTAAGAACCAGTGTGCACCCCTTCTGGGGTaGGCCTTCAGTGCGCAGCCC +
Preference number: 2 (lower is better)
Translates to: TSARCSVIPPLGVGKNQCAPLLG*AFSAQP
Trigger: GGGCTGCGCACTGAAGGCCCACCCCAGAAGGGGTGC...ACACTGGTTCTTACCCACTCCCAAGGGTGGGATAACGCTGCACCTTGCACTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR CCA 90 bp GTGTGTAGGTCCCTATGTCACCCTAAGCCACAAGGTGGCTTCTGGGCTTCCAAAGCACCCCTTCTGGGGTaGGCCTTCAGTGCGCAGCCC +
Preference number: 2 (lower is better)
Translates to: VCRSLCHPKPQGGFWASKAPLLG*AFSAQP
Trigger: GGGCTGCGCACTGAAGGCCCACCCCAGAAGGGGTGC...TTTGGAAGCCCAGAAGCCACCTTGTGGCTTAGGGTGACATAGGGACCTACACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR CCA 90 bp GCCTGGCCCCACTGCCCCTGCACATGCAAGGTAAGGAAGGGCCTCCTGCCTCTCCCCTGCATCCTGCTATaGGAGGCTCCCAATTTTAGT +
Preference number: 2 (lower is better)
Translates to: AWPHCPCTCKVRKGLLPLPCILL*EAPNFS
Trigger: ACTAAAATTGGGAGCCTCCCATAGCAGGATGCAGGG...GAGAGGCAGGAGGCCCTTCCTTACCTTGCATGTGCAGGGGCAGTGGGGCCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR-3UTR CCA 90 bp GAGAAAGGGATGGCCTACTGCCTCTCCACCCCATGGAACAGCCTGGTCCCTAGACTGCTGTCCCTTTGGTaGTCTGCGGTCCCTGTCACC +
Preference number: 2 (lower is better)
Translates to: EKGMAYCLSTPWNSLVPRLLSLW*SAVPVT
Trigger: GGTGACAGGGACCGCAGACCACCAAAGGGACAGCAG...TCTAGGGACCAGGCTGTTCCATGGGGTGGAGAGGCAGTAGGCCATCCCTTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR-3UTR TCA 90 bp GCCAAGCAACCTCGAATCAGCGCTTGGAGACAGTGCTCGACTCTGTGGGAGGGAACTGCAGCCTACCAATaGGGACACCGAGGCCCAAGA +
Preference number: 2 (lower is better)
Translates to: AKQPRISAWRQCSTLWEGTAAYQ*GHRGPR
Trigger: TCTTGGGCCTCGGTGTCCTCATTGGTAGGCTGCAGT...TCCCTCCCACAGAGTCGAGCACTGTCTCCAAGCGCTGATTCGAGGTTGCTTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR TCA 90 bp GGGAAACGTTCAGGGCGACCGCATTCACGTATGTGTGGGGACGCTCATCAACAACAGGCAATGTGCCGCTaGGCAGCGGGGAGGCTTATG +
Preference number: 2 (lower is better)
Translates to: GKRSGRPHSRMCGDAHQQQAMCR*AAGRLM
Trigger: CATAAGCCTCCCCGCTGCTCAGCGGCACATTGCCTG...TTGTTGATGAGCGTCCCCACACATACGTGAATGCGGTCGCCCTGAACGTTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR TCA 90 bp ACACGGCCAGTGCCTGTGGGTGCTACGTCAGCCGACAACAAACATGCCCACAGACTAGAAAACCGAGTGTaGCCCTGGCCAATGCCCCTC +
Preference number: 2 (lower is better)
Translates to: TRPVPVGATSADNKHAHRLENRV*PWPMPL
Trigger: GAGGGGCATTGGCCAGGGTCACACTCGGTTTTCTAG...TCTGTGGGCATGTTTGTTGTCGGCTGACGTAGCACCCACAGGCACTGGCCGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR-3UTR TCA 90 bp GGTAGTCGTCTTGGGTCCCAGGCCCAGTGCAGCTTCATCACCTGGGGGACAAAACTCTTGTTCAGCCTCTaGGGTAGACAAGGCCCCAGG +
Preference number: 2 (lower is better)
Translates to: GSRLGSQAQCSFITWGTKLLFSL*GRQGPR
Trigger: CCTGGGGCCTTGTCTACCTCAGAGGCTGAACAAGAG...TTTTGTCCCCCAGGTGATGAAGCTGCACTGGGCCTGGGACCCAAGACGACTACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR-3UTR GCA 90 bp GTGCCCCTGGGATCCCTGCTGTCAAATTCTGGATTTGTGGGGAAACGTTCAGGGCTGCACGTTGCGCTCTaGTGTCTCGGAGAGCAGGCC +
Preference number: 2 (lower is better)
Translates to: VPLGSLLSNSGFVGKRSGLHVAL*CLGEQA
Trigger: GGCCTGCTCTCCGAGACAGCAGAGCGCAACGTGCAG...CCCTGAACGTTTCCCCACAAATCCAGAATTTGACAGCAGGGATCCCAGGGGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR GCA 90 bp CCACAAGTGCAAGGTGCAGCGTTATCCCACCCTTGGGAGTGGGTAAGAACCAGTCTCATGTCAGAGGCCTaGCTCCTGCTCTGTCCGCCG +
Preference number: 2 (lower is better)
Translates to: PQVQGAALSHPWEWVRTSLMSEA*LLLCPP
Trigger: CGGCGGACAGAGCAGGAGGCAGGCCTCTGACATGAG...ACTGGTTCTTACCCACTCCCAAGGGTGGGATAACGCTGCACCTTGCACTTGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR GCA 90 bp GGAAGGAAGAGCCAAGCCCGCCAGGTCTTGGCTGGATCACACGAAGGAGAAAGTGGACAGTCAGGCCGGTaGACACAAGTGGCTGCTGCT +
Preference number: 2 (lower is better)
Translates to: GRKSQARQVLAGSHEGESGQSGR*TQVAAA
Trigger: AGCAGCAGCCACTTGTGTGCACCGGCCTGACTGTCC...ACTTTCTCCTTCGTGTGATCCAGCCAAGACCTGGCGGGCTTGGCTCTTCCTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR GCA 90 bp CCCGCCAGGTCTTGGCTGGATCACACGAAGGAGAAAGTTCCAGAGCTAGAATCACCTGGACCTGGGCTCTaGAGCCCCAGTTGGCAGGGT +
Preference number: 2 (lower is better)
Translates to: PARSWLDHTKEKVPELESPGPGL*SPSWQG
Trigger: ACCCTGCCAACTGGGGCTGCAGAGCCCAGGTCCAGG...TGATTCTAGCTCTGGAACTTTCTCCTTCGTGTGATCCAGCCAAGACCTGGCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR GCA 90 bp GAGTGGGTAGAGGGCTGCTCAAGAAGAGTGCTACGGAGAGTGCACTCAGCCGGAGAGTGCTACGGAGAGTaGACTCAGCCGGACTCTCAC +
Preference number: 2 (lower is better)
Translates to: EWVEGCSRRVLRRVHSAGECYGE*TQPDSH
Trigger: GTGAGAGTCCGGCTGAGTGCACTCTCCGTAGCACTC...TCCGGCTGAGTGCACTCTCCGTAGCACTCTTCTTGAGCAGCCCTCTACCCACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR GCA 90 bp TCTCACAGGCCGGGGACACCAGCCACTTTCCTGGCCCCTCAGGCAGCAGCTCAGCTGCTCTGTAAGGACTaGACTTATCTTGGCCTGAGA +
Preference number: 2 (lower is better)
Translates to: SHRPGTPATFLAPQAAAQLLCKD*TYLGLR
Trigger: TCTCAGGCCAAGATAAGTGCAGTCCTTACAGAGCAG...CTGAGCTGCTGCCTGAGGGGCCAGGAAAGTGGCTGGTGTCCCCGGCCTGTGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR-3UTR GCA 90 bp ACACGGCCAGTGCCTGTGGGTGCTACGTCAGCCGACAACAAACATGCCCACAGACACTGCCCCTGCACATaGAAGGTAAGGAAGGGCCTC +
Preference number: 2 (lower is better)
Translates to: TRPVPVGATSADNKHAHRHCPCT*KVRKGL
Trigger: GAGGCCCTTCCTTACCTTGCATGTGCAGGGGCAGTG...TCTGTGGGCATGTTTGTTGTCGGCTGACGTAGCACCCACAGGCACTGGCCGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR-3UTR GCA 90 bp TCAACTTGTAATGGGCGGTGCGACCGCTGGATTTCTCCTGCACTTCTACCACGTGGGTCCCAGGCCCAGTaGAGCTTCATCACCTGGGGG +
Preference number: 2 (lower is better)
Translates to: STCNGRCDRWISPALLPRGSQAQ*SFITWG
Trigger: CCCCCAGGTGATGAAGCTGCACTGGGCCTGGGACCC...ACGTGGTAGAAGTGCAGGAGAAATCCAGCGGTCGCACCGCCCATTACAAGTTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR-3UTR CCA 90 bp ATATGGCTTACATGGACAGGTGCTCATCTCTGCCCCTGGCCACCGGTGACCCGGGGAGCCGGAGGAGGGTaGCTATCGGCTTTATTCTCA +
Preference number: 2 (lower is better)
Translates to: IWLTWTGAHLCPWPPVTRGAGGG*LSALFS
Trigger: TGAGAATAAAGCCGATAGCCACCCTCCTCCGGCTCC...CCGGGTCACCGGTGGCCAGGGGCAGAGATGAGCACCTGTCCATGTAAGCCATAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674432.1
3UTR-3UTR CCA 90 bp GAGTGGGTAGAGGGCTGCTCAAGAAGAGTGCTACGGAGAGTGCACTCAGCCGGACGCCCGGCTTTTGTTTaGGCTGACACTGCAGAGCTG +
Preference number: 2 (lower is better)
Translates to: EWVEGCSRRVLRRVHSAGRPAFV*ADTAEL
Trigger: CAGCTCTGCAGTGTCAGCCCAAACAAAAGCCGGGCG...TCCGGCTGAGTGCACTCTCCGTAGCACTCTTCTTGAGCAGCCCTCTACCCACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR CCA 90 bp CCCTGTGGGGGTGGCATATGGCTTACATGGACAGGTGCTCATCTCTGCCCCTGGGCGGGAAAGTGTGTTTaGTGTATCGGGCAGTGGCTG +
Preference number: 2 (lower is better)
Translates to: PCGGGIWLTWTGAHLCPWAGKCV*CIGQWL
Trigger: CAGCCACTGCCCGATACACCAAACACACTTTCCCGC...CCAGGGGCAGAGATGAGCACCTGTCCATGTAAGCCATATGCCACCCCCACAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR CCA 90 bp GTAGAGGGCTGCTCAAGAAGAGTGCTACGGAGAGTGCACTCAGCCGGACTCTCACTCTGGGGTGTGGAGTaGTATCGCCGCTGCAGAGGT +
Preference number: 2 (lower is better)
Translates to: VEGCSRRVLRRVHSAGLSLWGVE*YRRCRG
Trigger: ACCTCTGCAGCGGCGATACCACTCCACACCCCAGAG...TGAGAGTCCGGCTGAGTGCACTCTCCGTAGCACTCTTCTTGAGCAGCCCTCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR CCA 90 bp ATGGACAGGTGCTCATCTCTGCCCCTGGCCACCGGTGACCCGGCCATAGTCCCTATCCGTCCCTTGGCCTaGGCTTCTTCAGAAGCAAAA +
Preference number: 2 (lower is better)
Translates to: MDRCSSLPLATGDPAIVPIRPLA*ASSEAK
Trigger: TTTTGCTTCTGAAGAAGCCCAGGCCAAGGGACGGAT...AGGGACTATGGCCGGGTCACCGGTGGCCAGGGGCAGAGATGAGCACCTGTCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR CCA 90 bp GGAAGGAAGAGCCAAGCCCGCCAGGTCTTGGCTGGATCACACGAAGGAGAAAGTACAAGTGGCTGCTGCTaGAGAGGCAGCATCCGTCCC +
Preference number: 2 (lower is better)
Translates to: GRKSQARQVLAGSHEGESTSGCC*RGSIRP
Trigger: GGGACGGATGCTGCCTCTCCAGCAGCAGCCACTTGT...ACTTTCTCCTTCGTGTGATCCAGCCAAGACCTGGCGGGCTTGGCTCTTCCTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR CCA 90 bp GGAGGTCAACATGGCCAGCGGGAGATGCGGCGGGCAAAGCAGCAGCGCACAGGACTCCTTCCCTACATCTaGATCTGTCACAAGCTCAAG +
Preference number: 2 (lower is better)
Translates to: GGQHGQREMRRAKQQRTGLLPYI*ICHKLK
Trigger: CTTGAGCTTGTGACAGATCCAGATGTAGGGAAGGAG...TCCTGTGCGCTGCTGCTTTGCCCGCCGCATCTCCCGCTGGCCATGTTGACCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR CCA 90 bp AGGCCCTGTGGGGGTGGCATATGGCTTACATGGACAGGTGCTCATCTCTGCCCCCAGTGCTCGACTCTGTaGGAGGGAGGAGTCATCTTG +
Preference number: 2 (lower is better)
Translates to: RPCGGGIWLTWTGAHLCPQCSTL*EGGVIL
Trigger: CAAGATGACTCCTCCCTCCCACAGAGTCGAGCACTG...GGGGCAGAGATGAGCACCTGTCCATGTAAGCCATATGCCACCCCCACAGGGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR CCA 90 bp ATGGACAGGTGCTCATCTCTGCCCCTGGCCACCGGTGACCCGGCCATAGTCCCTTTAAGGGACAATGCTTaGGAAGGTCACGGCCAAGCA +
Preference number: 2 (lower is better)
Translates to: MDRCSSLPLATGDPAIVPLRDNA*EGHGQA
Trigger: TGCTTGGCCGTGACCTTCCCAAGCATTGTCCCTTAA...AGGGACTATGGCCGGGTCACCGGTGGCCAGGGGCAGAGATGAGCACCTGTCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR CCA 90 bp CTGATTTGCTGCATGGACCCGCTTCCTGGGGTGAGGCTCTGGGTCACTGGGCTGAGCACACTGTGTTTATaGCCCACGCAGCAGGTGCTT +
Preference number: 2 (lower is better)
Translates to: LICCMDPLPGVRLWVTGLSTLCL*PTQQVL
Trigger: AAGCACCTGCTGCGTGGGCCATAAACACAGTGTGCT...CAGCCCAGTGACCCAGAGCCTCACCCCAGGAAGCGGGTCCATGCAGCAAATCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR CCA 90 bp GGGAGGAGTCATCTTGAGCAGACCTGGCTGCCAGGGTTTCTACGCCAGGACGCCTGCACTTCTACCACGTaGATGGAATCCCAGCAGCCT +
Preference number: 2 (lower is better)
Translates to: GRSHLEQTWLPGFLRQDACTSTT*MESQQP
Trigger: AGGCTGCTGGGATTCCATCCACGTGGTAGAAGTGCA...GGCGTCCTGGCGTAGAAACCCTGGCAGCCAGGTCTGCTCAAGATGACTCCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674228.1
3UTR-3UTR CCA 90 bp TCTCACAGGCCGGGGACACCAGCCACTTTCCTGGCCCCTCAGGCAGCAGCTCAGTTTGTTTTTCCACAATaGAGTGTGGTGAGGGCAGGG +
Preference number: 2 (lower is better)
Translates to: SHRPGTPATFLAPQAAAQFVFPQ*SVVRAG
Trigger: CCCTGCCCTCACCACACTCCATTGTGGAAAAACAAA...CTGAGCTGCTGCCTGAGGGGCCAGGAAAGTGGCTGGTGTCCCCGGCCTGTGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR-3UTR TCA 90 bp TTTAGTGGGGAGGGTCTCGCGGCTCTCAGGCAGGGTACCTGGATCGGCTTAATTCCATGCAGCTCGGGATaGCAGAGCTTAGGGGAGATC +
Preference number: 2 (lower is better)
Translates to: FSGEGLAALRQGTWIGLIPCSSG*QSLGEI
Trigger: GATCTCCCCTAAGCTCTGTCATCCCGAGCTGCATGG...AATTAAGCCGATCCAGGTACCCTGCCTGAGAGCCGCGAGACCCTCCCCACTAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR TCA 90 bp TCCTGTTTTAGTGGGGAGGGTCTCGCGGCTCTCAGGCAGGGTACCTGGATCGGCCTCCAGCCTTCTTTATaGGGATCACTCCAGCAAAGC +
Preference number: 2 (lower is better)
Translates to: SCFSGEGLAALRQGTWIGLQPSL*GSLQQS
Trigger: GCTTTGCTGGAGTGATCCTCATAAAGAAGGCTGGAG...GCCGATCCAGGTACCCTGCCTGAGAGCCGCGAGACCCTCCCCACTAAAACAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674228.1
3UTR-3UTR TCA 90 bp TCTCACAGGCCGGGGACACCAGCCACTTTCCTGGCCCCTCAGGCAGCAGCTCAGTCTGGTAGCATTCTATaGCCGAGTCATCTCATAACC +
Preference number: 2 (lower is better)
Translates to: SHRPGTPATFLAPQAAAQSGSIL*PSHLIT
Trigger: GGTTATGAGATGACTCGGTCATAGAATGCTACCAGA...CTGAGCTGCTGCCTGAGGGGCCAGGAAAGTGGCTGGTGTCCCCGGCCTGTGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR-3UTR TCA 90 bp TACCAGGCGCCCGATGTTGGCTATGTGTGGGGAGCAGTCACTCACAGTTTCATCCTGAGGCTGGCAGTGTaGATACCTGTGCCCAGCTGG +
Preference number: 2 (lower is better)
Translates to: YQAPDVGYVWGAVTHSFILRLAV*IPVPSW
Trigger: CCAGCTGGGCACAGGTATTCACACTGCCAGCCTCAG...GATGAAACTGTGAGTGACTGCTCCCCACACATAGCCAACATCGGGCGCCTGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR-3UTR GCA 90 bp ACAAGTGCAAGGTGCAGCGTTATCCCACCCTTGGGAGTGGGTAAGAACCAGTGTCGGGGACTGACAAACTaGAGGGCTGAGGAGGCTCCG +
Preference number: 2 (lower is better)
Translates to: TSARCSVIPPLGVGKNQCRGLTN*RAEEAP
Trigger: CGGAGCCTCCTCAGCCCTGCAGTTTGTCAGTCCCCG...ACACTGGTTCTTACCCACTCCCAAGGGTGGGATAACGCTGCACCTTGCACTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR GCA 90 bp GTGTGTAGGTCCCTATGTCACCCTAAGCCACAAGGTGGCTTCTGGGCTTCCAAAGCCCTGCCTGCACGTTaGGCTCTGCTGTCTCGGAGA +
Preference number: 2 (lower is better)
Translates to: VCRSLCHPKPQGGFWASKALPAR*ALLSRR
Trigger: TCTCCGAGACAGCAGAGCGCAACGTGCAGGCAGGGC...TTTGGAAGCCCAGAAGCCACCTTGTGGCTTAGGGTGACATAGGGACCTACACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR GCA 90 bp TCCCTGCTGTCAAATTCTGGATTTGTGGGGAAACGTTCAGGGCGACCGCATTCACAGAGGCCTGCCTCCTaGTCTGTCCGCCGTGGACCT +
Preference number: 2 (lower is better)
Translates to: SLLSNSGFVGKRSGRPHSQRPAS*SVRRGP
Trigger: AGGTCCACGGCGGACAGAGCAGGAGGCAGGCCTCTG...TGAATGCGGTCGCCCTGAACGTTTCCCCACAAATCCAGAATTTGACAGCAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR GCA 90 bp GGGCTCTGCAGCCCCAGTTGGCAGGGTTCCAAATGCCTTCTTTTTACAAACAAGGGCCTCTGCGAGGAGTaGCAGAGGCCATGCAGCTCG +
Preference number: 2 (lower is better)
Translates to: GLCSPSWQGSKCLLFTNKGLCEE*QRPCSS
Trigger: CGAGCTGCATGGCCTCTGGCACTCCTCGCAGAGGCC...CTTGTTTGTAAAAAGAAGGCATTTGGAACCCTGCCAACTGGGGCTGCAGAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR GCA 90 bp AGGAAGTTAGAAGTGAAATGGTGGAAGGCGGAAGGAGCAGGGGGCTTATTTAAGGGGCAGCCCCGGGACTaGAGCCTGCCTCTCCTCTGG +
Preference number: 2 (lower is better)
Translates to: RKLEVKWWKAEGAGGLFKGQPRD*SLPLLW
Trigger: CCAGAGGAGAGGCAGGCTGCAGTCCCGGGGCTGCCC...CTTAAATAAGCCCCCTGCTCCTTCCGCCTTCCACCATTTCACTTCTAACTTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR GCA 90 bp CCCGCCAGGTCTTGGCTGGATCACACGAAGGAGAAAGTTCCAGAGCTAGAATCAACTGCCTGGGGACTGTaGAGGTTGGCTGGGCGGGAA +
Preference number: 2 (lower is better)
Translates to: PARSWLDHTKEKVPELESTAWGL*RLAGRE
Trigger: TTCCCGCCCAGCCAACCTGCACAGTCCCCAGGCAGT...TGATTCTAGCTCTGGAACTTTCTCCTTCGTGTGATCCAGCCAAGACCTGGCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR GCA 90 bp GTTCAGGGCGACCGCATTCACGTATGTGTGGGGACGCTCATCAACAAAGCCAGAAGGGGCGGAAGGTTATaGTGGTTGTGGCCGAGTCGG +
Preference number: 2 (lower is better)
Translates to: VQGDRIHVCVGTLINKARRGGRL*WLWPSR
Trigger: CCGACTCGGCCACAACCAGCATAACCTTCCGCCCCT...TCTGGCTTTGTTGATGAGCGTCCCCACACATACGTGAATGCGGTCGCCCTGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR GCA 90 bp ATATGGCTTACATGGACAGGTGCTCATCTCTGCCCCTGGCCACCGGTGACCCGGCTCCGAGGTTCATGGTaGCAGAGCCAGATTTGTTGG +
Preference number: 2 (lower is better)
Translates to: IWLTWTGAHLCPWPPVTRLRGSW*QSQICW
Trigger: CCAACAAATCTGGCTCTGGCACCATGAACCTCGGAG...CCGGGTCACCGGTGGCCAGGGGCAGAGATGAGCACCTGTCCATGTAAGCCATAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674228.1
3UTR-3UTR GCA 90 bp GAGAAAGGGATGGCCTACTGCCTCTCCACCCCATGGAACAGCCTGGTCCCTAGAACCTGGAGGCCCACTTaGATGGCCACTGGTAACTGT +
Preference number: 2 (lower is better)
Translates to: EKGMAYCLSTPWNSLVPRTWRPT*MATGNC
Trigger: ACAGTTACCAGTGGCCATGCAAGTGGGCCTCCAGGT...TCTAGGGACCAGGCTGTTCCATGGGGTGGAGAGGCAGTAGGCCATCCCTTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR-3UTR GCA 90 bp ATTAAAGACCCTGTCAACACAGTCTGCTCTTCCAACCCCCAACCACCAGGGGCGCCCACTACACACTGTTaGAGACCCTCGGGGTCTGGG +
Preference number: 2 (lower is better)
Translates to: IKDPVNTVCSSNPQPPGAPTTHC*RPSGSG
Trigger: CCCAGACCCCGAGGGTCTGCAACAGTGTGTAGTGGG...CGCCCCTGGTGGTTGGGGGTTGGAAGAGCAGACTGTGTTGACAGGGTCTTTAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR-3UTR CCA 90 bp GTGCCCCTGGGATCCCTGCTGTCAAATTCTGGATTTGTGGGGAAACGTTCAGGGGCCTCTCCTCTGGGCTaGGCTGTGAGAGCTACACCA +
Preference number: 2 (lower is better)
Translates to: VPLGSLLSNSGFVGKRSGASPLG*AVRATP
Trigger: TGGTGTAGCTCTCACAGCCCAGCCCAGAGGAGAGGC...CCCTGAACGTTTCCCCACAAATCCAGAATTTGACAGCAGGGATCCCAGGGGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR CCA 90 bp GGGCTCTGCAGCCCCAGTTGGCAGGGTTCCAAATGCCTTCTTTTTACAAACAAGGGCGGCTCTGGGGTGTaGAGTGGTATCGCCGCTGCA +
Preference number: 2 (lower is better)
Translates to: GLCSPSWQGSKCLLFTNKGGSGV*SGIAAA
Trigger: TGCAGCGGCGATACCACTCCACACCCCAGAGCCGCC...CTTGTTTGTAAAAAGAAGGCATTTGGAACCCTGCCAACTGGGGCTGCAGAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR CCA 90 bp AGGTCACCCCTTCCAAGCCAGCTAGCCCTGGACAGGCAATGTGCCGCTGAGCAGCTCAGGCAGGGTACCTaGATCGGCTTAATTATCAGG +
Preference number: 2 (lower is better)
Translates to: RSPLPSQLALDRQCAAEQLRQGT*IGLIIR
Trigger: CCTGATAATTAAGCCGATCCAGGTACCCTGCCTGAG...CTGCTCAGCGGCACATTGCCTGTCCAGGGCTAGCTGGCTTGGAAGGGGTGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR CCA 90 bp AGGTCACCCCTTCCAAGCCAGCTAGCCCTGGACAGGCAATGTGCCGCTGAGCAGATCCGTCCCTTGGCCTaGGCTTCTTCAGAAGCAAAA +
Preference number: 2 (lower is better)
Translates to: RSPLPSQLALDRQCAAEQIRPLA*ASSEAK
Trigger: TTTTGCTTCTGAAGAAGCCCAGGCCAAGGGACGGAT...CTGCTCAGCGGCACATTGCCTGTCCAGGGCTAGCTGGCTTGGAAGGGGTGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR CCA 90 bp GAGTGGGTAGAGGGCTGCTCAAGAAGAGTGCTACGGAGAGTGCACTCAGCCGGACTCTGCAGCCCCAGTTaGCAGGGTTCCAAATGCCTT +
Preference number: 2 (lower is better)
Translates to: EWVEGCSRRVLRRVHSAGLCSPS*QGSKCL
Trigger: AAGGCATTTGGAACCCTGCCAACTGGGGCTGCAGAG...TCCGGCTGAGTGCACTCTCCGTAGCACTCTTCTTGAGCAGCCCTCTACCCACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR CCA 90 bp ATATGGCTTACATGGACAGGTGCTCATCTCTGCCCCTGGCCACCGGTGACCCGGACAGCCAAGTGCCCCTaGGATCCCTGCTGTCAAATT +
Preference number: 2 (lower is better)
Translates to: IWLTWTGAHLCPWPPVTRTAKCP*DPCCQI
Trigger: AATTTGACAGCAGGGATCCCAGGGGCACTTGGCTGT...CCGGGTCACCGGTGGCCAGGGGCAGAGATGAGCACCTGTCCATGTAAGCCATAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR CCA 90 bp TCCTGTTTTAGTGGGGAGGGTCTCGCGGCTCTCAGGCAGGGTACCTGGATCGGCGGTCAAAGGCATTGTTaGCTTCCACCTCCAGCTTTC +
Preference number: 2 (lower is better)
Translates to: SCFSGEGLAALRQGTWIGGQRHC*LPPPAF
Trigger: GAAAGCTGGAGGTGGAAGCCAACAATGCCTTTGACC...GCCGATCCAGGTACCCTGCCTGAGAGCCGCGAGACCCTCCCCACTAAAACAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674228.1
3UTR CAA 90 bp GACAATGCTTGGGAAGGTCACGGCCAAGCAACCTCGAATCAGCGCTaGGAGACAGTGCTCGACTCTGTGGGAGGGAGGAGTCATCTTGAG +
Preference number: 2 (lower is better)
Translates to: DNAWEGHGQATSNQR*ETVLDSVGGRSHLE
Trigger: CTCAAGATGACTCCTCCCTCCCACAGAGTCGAGCACTGTCTCCAAGCGCTGATTCGAGGTTGCTTGGCCGTGACCTTCCCAAGCATTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR CAA 90 bp TGGTGGAAGGCGGAAGGAGCAGGGGGCTTATTTAAGGGACAATGCTaGGGAAGGTCACGGCCAAGCAACCTCGAATCAGCGCTTGGAGAC +
Preference number: 2 (lower is better)
Translates to: WWKAEGAGGLFKGQC*GRSRPSNLESALGD
Trigger: GTCTCCAAGCGCTGATTCGAGGTTGCTTGGCCGTGACCTTCCCAAGCATTGTCCCTTAAATAAGCCCCCTGCTCCTTCCGCCTTCCACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR CAA 90 bp AGGACAGCCAAGTGCCCCTGGGATCCCTGCTGTCAAATTCTGGATTaGTGGGGAAACGTTCAGGGCGACCGCATTCACGTATGTGTGGGG +
Preference number: 2 (lower is better)
Translates to: RTAKCPWDPCCQILD*WGNVQGDRIHVCVG
Trigger: CCCCACACATACGTGAATGCGGTCGCCCTGAACGTTTCCCCACAAATCCAGAATTTGACAGCAGGGATCCCAGGGGCACTTGGCTGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR TCA 90 bp GTTCAGGGCGACCGCATTCACGTATGTGTGGGGACGCTCATCAACAAAGCCAGAGATGCAGCTGTTATGTaGCCTGTCGGGGAGGGAAGG +
Preference number: 2 (lower is better)
Translates to: VQGDRIHVCVGTLINKARDAAVM*PVGEGR
Trigger: CCTTCCCTCCCCGACAGGTCACATAACAGCTGCATC...TCTGGCTTTGTTGATGAGCGTCCCCACACATACGTGAATGCGGTCGCCCTGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR TCA 90 bp TTTAGTGGGGAGGGTCTCGCGGCTCTCAGGCAGGGTACCTGGATCGGCTTAATTTTTTTGAGCGGGGACTaGCAAACTGCAGGGCTGAGG +
Preference number: 2 (lower is better)
Translates to: FSGEGLAALRQGTWIGLIFLSGD*QTAGLR
Trigger: CCTCAGCCCTGCAGTTTGTCAGTCCCCGCTCAAAAA...AATTAAGCCGATCCAGGTACCCTGCCTGAGAGCCGCGAGACCCTCCCCACTAAA
57% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR TCA 90 bp GTGTGTAGGTCCCTATGTCACCCTAAGCCACAAGGTGGCTTCTGGGCTTCCAAACGCTGGGTCAGCACTTaGGAGAGCTCCCTCTGCAAC +
Preference number: 2 (lower is better)
Translates to: VCRSLCHPKPQGGFWASKRWVST*ESSLCN
Trigger: GTTGCAGAGGGAGCTCTCTCAAGTGCTGACCCAGCG...TTTGGAAGCCCAGAAGCCACCTTGTGGCTTAGGGTGACATAGGGACCTACACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR TCA 90 bp GCCTGGCCCCACTGCCCCTGCACATGCAAGGTAAGGAAGGGCCTCCTGCCTCTCCACTTACTAGCTCTGTaGACCTGGGTAAGTTATATC +
Preference number: 2 (lower is better)
Translates to: AWPHCPCTCKVRKGLLPLHLLAL*TWVSYI
Trigger: GATATAACTTACCCAGGTTCACAGAGCTAGTAAGTG...GAGAGGCAGGAGGCCCTTCCTTACCTTGCATGTGCAGGGGCAGTGGGGCCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR-3UTR TCA 90 bp TCTCACAGGCCGGGGACACCAGCCACTTTCCTGGCCCCTCAGGCAGCAGCTCAGGTATCATTACATATGTaGACGATGAGATGGGAAGGG +
Preference number: 2 (lower is better)
Translates to: SHRPGTPATFLAPQAAAQVSLHM*TMRWEG
Trigger: CCCTTCCCATCTCATCGTTCACATATGTAATGATAC...CTGAGCTGCTGCCTGAGGGGCCAGGAAAGTGGCTGGTGTCCCCGGCCTGTGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR-3UTR TCA 90 bp GACCAATGGCCTGAGAGAATCCAACTAGGGTCATTCTTTTCGGGGATCAAGCTGCCTCCACACAGCCGGTaGAGGGAGCTGGTGCCTCTC +
Preference number: 2 (lower is better)
Translates to: DQWPERIQLGSFFSGIKLPPHSR*RELVPL
Trigger: GAGAGGCACCAGCTCCCTTCACCGGCTGTGTGGAGG...CAGCTTGATCCCCGAAAAGAATGACCCTAGTTGGATTCTCTCAGGCCATTGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR-3UTR GCA 90 bp GGCGCTGTGCGGTCAATGATGCAGCTGTTATGTGACCTGTCGGGGAGGGAAGGGAAGGAATCTAACGAGTaGACGGCGTGTCTGGTTAGC +
Preference number: 2 (lower is better)
Translates to: GAVRSMMQLLCDLSGREGKESNE*TACLVS
Trigger: GCTAACCAGACACGCCGTGCACTCGTTAGATTCCTT...CCCTTCCCTCCCCGACAGGTCACATAACAGCTGCATCATTGACCGCACAGCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000264202.8
ENST00000264203.7
ENST00000375142.5
ENST00000375144.6
ENST00000433834.5
ENST00000674228.1
ENST00000674432.1
ENST00000674449.1
3UTR-3UTR GCA 90 bp CAGCTCGGGATGACAGAGCTTAGGGGAGATCCCGGCCTCCTGACTCTCCTGACTAAGGAATCTAACGAGTaGACGGCGTGTCTGGTTAGC +
Preference number: 2 (lower is better)
Translates to: QLGMTELRGDPGLLTLLTKESNE*TACLVS
Trigger: GCTAACCAGACACGCCGTGCACTCGTTAGATTCCTT...AGTCAGGAGAGTCAGGAGGCCGGGATCTCCCCTAAGCTCTGTCATCCCGAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR GCA 90 bp GGAAGGAAGAGCCAAGCCCGCCAGGTCTTGGCTGGATCACACGAAGGAGAAAGTACTCTCCAGGGATGCTaGCTCCTTCCCTACATCTGG +
Preference number: 2 (lower is better)
Translates to: GRKSQARQVLAGSHEGESTLQGC*LLPYIW
Trigger: CCAGATGTAGGGAAGGAGGCAGCATCCCTGGAGAGT...ACTTTCTCCTTCGTGTGATCCAGCCAAGACCTGGCGGGCTTGGCTCTTCCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR GCA 90 bp TCCCTGCTGTCAAATTCTGGATTTGTGGGGAAACGTTCAGGGCGACCGCATTCATCCCCAGGGGCTTCTTaGCAAGCTCACAGCGGGAGG +
Preference number: 2 (lower is better)
Translates to: SLLSNSGFVGKRSGRPHSSPGAS*QAHSGR
Trigger: CCTCCCGCTGTGAGCTTGGCAAGAAGCCCCTGGGGA...TGAATGCGGTCGCCCTGAACGTTTCCCCACAAATCCAGAATTTGACAGCAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR GCA 90 bp GAGTGGGTAGAGGGCTGCTCAAGAAGAGTGCTACGGAGAGTGCACTCAGCCGGAGCTGCTCAAGAAGAGTaGTACGGAGAGTGCACTCAG +
Preference number: 2 (lower is better)
Translates to: EWVEGCSRRVLRRVHSAGAAQEE*YGECTQ
Trigger: CTGAGTGCACTCTCCGTAGCACTCTTCTTGAGCAGC...TCCGGCTGAGTGCACTCTCCGTAGCACTCTTCTTGAGCAGCCCTCTACCCACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR GCA 90 bp TTAACTTGGCCCAGAAAACCCCTCAGCCCGGATTGCAAAGGGCGGCACAGGACAGAGTGGGTAGAGGGCTaGTCAAGAAGAGTGCTACGG +
Preference number: 2 (lower is better)
Translates to: LTWPRKPLSPDCKGRHRTEWVEG*SRRVLR
Trigger: CCGTAGCACTCTTCTTGAGCAGCCCTCTACCCACTC...TGTCCTGTGCCGCCCTTTGCAATCCGGGCTGAGGGGTTTTCTGGGCCAAGTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR GCA 90 bp ATATGGCTTACATGGACAGGTGCTCATCTCTGCCCCTGGCCACCGGTGACCCGGTTGTCTGCAAAAGTCTaGACAGACCTGCAAGGGAGG +
Preference number: 2 (lower is better)
Translates to: IWLTWTGAHLCPWPPVTRLSAKV*TDLQGR
Trigger: CCTCCCTTGCAGGTCTGTGCAGACTTTTGCAGACAA...CCGGGTCACCGGTGGCCAGGGGCAGAGATGAGCACCTGTCCATGTAAGCCATAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR GCA 90 bp GCTCCAAAGCCACGGGGAAAAGAGCTTGCATTCCAGGGCCTGCTGTGGTCACTTCAACCACCAAACGAGTaGCCTGCATCCTGCTATGGG +
Preference number: 2 (lower is better)
Translates to: APKPRGKELAFQGLLWSLQPPNE*PASCYG
Trigger: CCCATAGCAGGATGCAGGGCACTCGTTTGGTGGTTG...AAGTGACCACAGCAGGCCCTGGAATGCAAGCTCTTTTCCCCGTGGCTTTGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR-3UTR CCA 90 bp GTGCCCCTGGGATCCCTGCTGTCAAATTCTGGATTTGTGGGGAAACGTTCAGGGACGAGGTGGGAAGGATaGTGCAGGACACTGGCCACT +
Preference number: 2 (lower is better)
Translates to: VPLGSLLSNSGFVGKRSGTRWEG*CRTLAT
Trigger: AGTGGCCAGTGTCCTGCACCATCCTTCCCACCTCGT...CCCTGAACGTTTCCCCACAAATCCAGAATTTGACAGCAGGGATCCCAGGGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR CCA 90 bp GTCAAATTCTGGATTTGTGGGGAAACGTTCAGGGCGACCGCATTCACGTATGTGCCGTGCCTCCTCGACTaGACAAGGGCCTCTGCGAGG +
Preference number: 2 (lower is better)
Translates to: VKFWICGETFRATAFTYVPCLLD*TRASAR
Trigger: CCTCGCAGAGGCCCTTGTCCAGTCGAGGAGGCACGG...CACATACGTGAATGCGGTCGCCCTGAACGTTTCCCCACAAATCCAGAATTTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR CCA 90 bp ACAAGTGCAAGGTGCAGCGTTATCCCACCCTTGGGAGTGGGTAAGAACCAGTGTGGGGACTGTGCAGGTTaGCTGGGCGGGAAAGTGTGT +
Preference number: 2 (lower is better)
Translates to: TSARCSVIPPLGVGKNQCGDCAG*LGGKVC
Trigger: ACACACTTTCCCGCCCAGCCAACCTGCACAGTCCCC...ACACTGGTTCTTACCCACTCCCAAGGGTGGGATAACGCTGCACCTTGCACTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR CCA 90 bp TCTCGCGGCTCTCAGGCAGGGTACCTGGATCGGCTTAATTATCAGGCTGGATGTTGCAGAGGTCCACGCTaGCGGTGGTCGTGGTATTCA +
Preference number: 2 (lower is better)
Translates to: SRGSQAGYLDRLNYQAGCCRGPR*RWSWYS
Trigger: TGAATACCACGACCACCGCCAGCGTGGACCTCTGCA...ACATCCAGCCTGATAATTAAGCCGATCCAGGTACCCTGCCTGAGAGCCGCGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR CCA 90 bp AGGAAGTTAGAAGTGAAATGGTGGAAGGCGGAAGGAGCAGGGGGCTTATTTAAGTGGCCGAGTCGGCACTaGGCGTCCAGGCAGCTCCAG +
Preference number: 2 (lower is better)
Translates to: RKLEVKWWKAEGAGGLFKWPSRH*ASRQLQ
Trigger: CTGGAGCTGCCTGGACGCCCAGTGCCGACTCGGCCA...CTTAAATAAGCCCCCTGCTCCTTCCGCCTTCCACCATTTCACTTCTAACTTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR CCA 90 bp GGATGTCTCTTCCACCTTTACCTCACTGGCCTGGATACTTTCCCAGCCCTGATGCCAGGCGCCCGATGTTaGCTATGTGTGGGGAGCAGT +
Preference number: 2 (lower is better)
Translates to: GCLFHLYLTGLDTFPALMPGARC*LCVGSS
Trigger: ACTGCTCCCCACACATAGCCAACATCGGGCGCCTGG...CATCAGGGCTGGGAAAGTATCCAGGCCAGTGAGGTAAAGGTGGAAGAGACATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR-3UTR CCA 90 bp ACACGGCCAGTGCCTGTGGGTGCTACGTCAGCCGACAACAAACATGCCCACAGAAGGGTGTGCACTTGCTaGTTGACAGCTGTGTGTGCA +
Preference number: 2 (lower is better)
Translates to: TRPVPVGATSADNKHAHRRVCTC*LTAVCA
Trigger: TGCACACACAGCTGTCAACCAGCAAGTGCACACCCT...TCTGTGGGCATGTTTGTTGTCGGCTGACGTAGCACCCACAGGCACTGGCCGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR CAA 90 bp CTCCAACGTGGCAGGAGCCTGGCAGCTCTCAGTCATTCGATGGGGTaGGTGGTCATGAGGCTGGAGCTCAAGCCAAACATAGTCCTGATT +
Preference number: 2 (lower is better)
Translates to: LQRGRSLAALSHSMG*VVMRLELKPNIVLI
Trigger: AATCAGGACTATGTTTGGCTTGAGCTCCAGCCTCATGACCACCAACCCCATCGAATGACTGAGAGCTGCCAGGCTCCTGCCACGTTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR-3UTR TCA 90 bp GGGAAACGTTCAGGGCGACCGCATTCACGTATGTGTGGGGACGCTCATCAACAAGCGCTGTGCGGTCAATaGTGCAGCTGTTATGTGACC +
Preference number: 2 (lower is better)
Translates to: GKRSGRPHSRMCGDAHQQALCGQ*CSCYVT
Trigger: GGTCACATAACAGCTGCATCATTGACCGCACAGCGC...TTGTTGATGAGCGTCCCCACACATACGTGAATGCGGTCGCCCTGAACGTTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR TCA 90 bp GTGTGGCAGAAGCAGGCTCGGAGCCGGAGGAGGGTGGCTATCGGCTTTATTCTCCAATGGCTGTTAGGGTaGACATGCCCCAGAAAACAA +
Preference number: 2 (lower is better)
Translates to: VWQKQARSRRRVAIGFILQWLLG*TCPRKQ
Trigger: TTGTTTTCTGGGGCATGTTCACCCTAACAGCCATTG...GAGAATAAAGCCGATAGCCACCCTCCTCCGGCTCCGAGCCTGCTTCTGCCACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375144.6
3UTR-3UTR TCA 90 bp AAAACTGTAAAGCAGGTGACTGAAATCTGTCGCCCACCCCAGTCCACGAGCTGGCCATGCAGCTCGGGATaGCAGAGCTTAGGGGAGATC +
Preference number: 2 (lower is better)
Translates to: KTVKQVTEICRPPQSTSWPCSSG*QSLGEI
Trigger: GATCTCCCCTAAGCTCTGTCATCCCGAGCTGCATGG...CCAGCTCGTGGACTGGGGTGGGCGACAGATTTCAGTCACCTGCTTTACAGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR GCA 90 bp GTGCCCCTGGGATCCCTGCTGTCAAATTCTGGATTTGTGGGGAAACGTTCAGGGCACACACGTGATAGGTaGCGTGTTACATGGGGCCGA +
Preference number: 2 (lower is better)
Translates to: VPLGSLLSNSGFVGKRSGHTRDR*RVTWGR
Trigger: TCGGCCCCATGTAACACGGCACCTATCACGTGTGTG...CCCTGAACGTTTCCCCACAAATCCAGAATTTGACAGCAGGGATCCCAGGGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR GCA 90 bp CCAGGAGAGAGAGCTCTTCAGCACACTCCGATGGCACTGGGTGAGTCAAAATTCCAACTGGGGGCAGGATaGTGTCGTCACCCCTCTTTC +
Preference number: 2 (lower is better)
Translates to: PGERALQHTPMALGESKFQLGAG*CRHPSF
Trigger: GAAAGAGGGGTGACGACAGCATCCTGCCCCCAGTTG...GAATTTTGACTCACCCAGTGCCATCGGAGTGTGCTGAAGAGCTCTCTCTCCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR-3UTR GCA 90 bp ATTAAAGACCCTGTCAACACAGTCTGCTCTTCCAACCCCCAACCACCAGGGGCGGATGGCAGCTCCAACTaGTGTCCCTTTGGTGGTCTG +
Preference number: 2 (lower is better)
Translates to: IKDPVNTVCSSNPQPPGADGSSN*CPFGGL
Trigger: CAGACCACCAAAGGGACAGCAGTTGGAGCTGCCATC...CGCCCCTGGTGGTTGGGGGTTGGAAGAGCAGACTGTGTTGACAGGGTCTTTAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR-3UTR CCA 90 bp AACAGCACCCAGACTGAGTTCTGGCTACCGAATCCCTACAAGTCACAGGAAGAGGCCTCTCCTCTGGGCTaGGCTGTGAGAGCTACACCA +
Preference number: 2 (lower is better)
Translates to: NSTQTEFWLPNPYKSQEEASPLG*AVRATP
Trigger: TGGTGTAGCTCTCACAGCCCAGCCCAGAGGAGAGGC...CTCTTCCTGTGACTTGTAGGGATTCGGTAGCCAGAACTCAGTCTGGGTGCTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR CCA 90 bp CGCCAGGTCTTGGCTGGATCACACGAAGGAGAAAGTTCCAGAGCTAGAATCATGTGGTGTATCGGGCAGTaGCTGCCAGTGGCAGGCCTA +
Preference number: 2 (lower is better)
Translates to: RQVLAGSHEGESSRARIMWCIGQ*LPVAGL
Trigger: TAGGCCTGCCACTGGCAGCCACTGCCCGATACACCA...CATGATTCTAGCTCTGGAACTTTCTCCTTCGTGTGATCCAGCCAAGACCTGGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR CCA 90 bp CTGGATGTAGATCTGGCGCTGGGTCAGCACTTGAGAGAGCTCCCTCTGCAACTGAGCCTCCACCCAGAGTaGAAAGCACACACACGTGAT +
Preference number: 2 (lower is better)
Translates to: LDVDLALGQHLRELPLQLSLHPE*KAHTRD
Trigger: ATCACGTGTGTGTGCTTTCCACTCTGGGTGGAGGCT...CAGTTGCAGAGGGAGCTCTCTCAAGTGCTGACCCAGCGCCAGATCTACATCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR CCA 90 bp AGGAGAAACGCAGACATTTGGTTCATGCTGGGGAAATACACGTTTCTGAGTATCCCAGGACGCCCCCAGTaGGCGGCCAGGGAACTGCAC +
Preference number: 2 (lower is better)
Translates to: RRNADIWFMLGKYTFLSIPGRPQ*AARELH
Trigger: GTGCAGTTCCCTGGCCGCCCACTGGGGGCGTCCTGG...GATACTCAGAAACGTGTATTTCCCCAGCATGAACCAAATGTCTGCGTTTCTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR CCA 90 bp AGGCCCTGTGGGGGTGGCATATGGCTTACATGGACAGGTGCTCATCTCTGCCCCGCATTCACGTATGTGTaGGGACGCTCATCAACAAAG +
Preference number: 2 (lower is better)
Translates to: RPCGGGIWLTWTGAHLCPAFTYV*GRSSTK
Trigger: CTTTGTTGATGAGCGTCCCCACACATACGTGAATGC...GGGGCAGAGATGAGCACCTGTCCATGTAAGCCATATGCCACCCCCACAGGGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR CCA 90 bp GCTCCAAAGCCACGGGGAAAAGAGCTTGCATTCCAGGGCCTGCTGTGGTCACTTGACATGTTGGTGCTGTaGTGCTGGGAGGCAGGATTA +
Preference number: 2 (lower is better)
Translates to: APKPRGKELAFQGLLWSLDMLVL*CWEAGL
Trigger: TAATCCTGCCTCCCAGCACCACAGCACCAACATGTC...AAGTGACCACAGCAGGCCCTGGAATGCAAGCTCTTTTCCCCGTGGCTTTGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR-3UTR CCA 90 bp ATTAAAGACCCTGTCAACACAGTCTGCTCTTCCAACCCCCAACCACCAGGGGCGAACGTTCCTCGCATGTaGTCCCAGGAGAGAGAGCTC +
Preference number: 2 (lower is better)
Translates to: IKDPVNTVCSSNPQPPGANVPRM*SQEREL
Trigger: GAGCTCTCTCTCCTGGGACCACATGCGAGGAACGTT...CGCCCCTGGTGGTTGGGGGTTGGAAGAGCAGACTGTGTTGACAGGGTCTTTAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR CAA 90 bp TGGTCACTGGCTCTTCTGGGAAGGAAGAGCCAAGCCCGCCAGGTCTaGGCTGGATCACACGAAGGAGAAAGTTCCAGAGCTAGAATCATG +
Preference number: 2 (lower is better)
Translates to: WSLALLGRKSQARQV*AGSHEGESSRARIM
Trigger: CATGATTCTAGCTCTGGAACTTTCTCCTTCGTGTGATCCAGCCAAGACCTGGCGGGCTTGGCTCTTCCTTCCCAGAAGAGCCAGTGACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR CAA 90 bp CTCATTCCTCATCCCACAAGTGCAAGGTGCAGCGTTATCCCACCCTaGGGAGTGGGTAAGAACCAGTGTCTCTGCGTGTCTGAGCACACT +
Preference number: 2 (lower is better)
Translates to: LIPHPTSARCSVIPP*GVGKNQCLCVSEHT
Trigger: AGTGTGCTCAGACACGCAGAGACACTGGTTCTTACCCACTCCCAAGGGTGGGATAACGCTGCACCTTGCACTTGTGGGATGAGGAATGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR CAA 90 bp ACGCCACCTTCAAAATACAGGTCTCGATACTGGTCAAAGGCATTGTaGGCTTCCACCTCCAGCTTTCTCAGCCGAGCTGACGGCATGGCC +
Preference number: 2 (lower is better)
Translates to: TPPSKYRSRYWSKAL*ASTSSFLSRADGMA
Trigger: GGCCATGCCGTCAGCTCGGCTGAGAAAGCTGGAGGTGGAAGCCAACAATGCCTTTGACCAGTATCGAGACCTGTATTTTGAAGGTGGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR-3UTR TCA 90 bp AGGCCCTGTGGGGGTGGCATATGGCTTACATGGACAGGTGCTCATCTCTGCCCCTACGGAGAGTGCAGATaGCACATCAGGACTTTACTT +
Preference number: 2 (lower is better)
Translates to: RPCGGGIWLTWTGAHLCPYGECR*HIRTLL
Trigger: AAGTAAAGTCCTGATGTGTCATCTGCACTCTCCGTA...GGGGCAGAGATGAGCACCTGTCCATGTAAGCCATATGCCACCCCCACAGGGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR TCA 90 bp ACACGGCCAGTGCCTGTGGGTGCTACGTCAGCCGACAACAAACATGCCCACAGACACCTGCTGTTATTATaGATCACGATGCAGGGGAAC +
Preference number: 2 (lower is better)
Translates to: TRPVPVGATSADNKHAHRHLLLL*ITMQGN
Trigger: GTTCCCCTGCATCGTGATTCATAATAACAGCAGGTG...TCTGTGGGCATGTTTGTTGTCGGCTGACGTAGCACCCACAGGCACTGGCCGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR-3UTR TCA 90 bp GAGAAAGGGATGGCCTACTGCCTCTCCACCCCATGGAACAGCCTGGTCCCTAGACAATTTAAAAGAGGCTaGGGGTGTGCACTTGCTGGT +
Preference number: 2 (lower is better)
Translates to: EKGMAYCLSTPWNSLVPRQFKRG*GCALAG
Trigger: ACCAGCAAGTGCACACCCTCAGCCTCTTTTAAATTG...TCTAGGGACCAGGCTGTTCCATGGGGTGGAGAGGCAGTAGGCCATCCCTTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR-3UTR TCA 90 bp GTGTGGCAGAAGCAGGCTCGGAGCCGGAGGAGGGTGGCTATCGGCTTTATTCTCAAAATACACCCCAGCTaGGACATTTCTGCTCTTGCT +
Preference number: 2 (lower is better)
Translates to: VWQKQARSRRRVAIGFILKIHPS*DISALA
Trigger: AGCAAGAGCAGAAATGTCTCAGCTGGGGTGTATTTT...GAGAATAAAGCCGATAGCCACCCTCCTCCGGCTCCGAGCCTGCTTCTGCCACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR-3UTR GCA 90 bp CGCCAGGTCTTGGCTGGATCACACGAAGGAGAAAGTTCCAGAGCTAGAATCATGCGACTCACACGGTGCTaGTGGACTGCAGAGCGTGTT +
Preference number: 2 (lower is better)
Translates to: RQVLAGSHEGESSRARIMRLTRC*WTAERV
Trigger: AACACGCTCTGCAGTCCAGCAGCACCGTGTGAGTCG...CATGATTCTAGCTCTGGAACTTTCTCCTTCGTGTGATCCAGCCAAGACCTGGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR GCA 90 bp CTCAATGCCATGATGGAAATGCCTGATGGCCACACTGTGAGGCTGACCCGAGTCACTTGTAATGGGCGGTaGGACCGCTGGATTTCTCCT +
Preference number: 2 (lower is better)
Translates to: LNAMMEMPDGHTVRLTRVTCNGR*DRWISP
Trigger: AGGAGAAATCCAGCGGTCGCACCGCCCATTACAAGT...GACTCGGGTCAGCCTCACAGTGTGGCCATCAGGCATTTCCATCATGGCATTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674228.1
3UTR-3UTR GCA 90 bp TCCATCTGTCTGGTAAGGCTGCCTCCGAGGTTCATGGTGCCAGAGCCAGATTTGACAAAGCCAGCGCACTaGCCCTTATATGAGCATCGC +
Preference number: 2 (lower is better)
Translates to: SICLVRLPPRFMVPEPDLTKPAH*PLYEHR
Trigger: GCGATGCTCATATAAGGGGCAGTGCGCTGGCTTTGT...CAAATCTGGCTCTGGCACCATGAACCTCGGAGGCAGCCTTACCAGACAGATGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR-3UTR CCA 90 bp GTGTGGCAGAAGCAGGCTCGGAGCCGGAGGAGGGTGGCTATCGGCTTTATTCTCTTTTATGCCTATAAATaGGGGGACAGGGAGGAAGAC +
Preference number: 2 (lower is better)
Translates to: VWQKQARSRRRVAIGFILFYAYK*GDREED
Trigger: GTCTTCCTCCCTGTCCCCCCATTTATAGGCATAAAA...GAGAATAAAGCCGATAGCCACCCTCCTCCGGCTCCGAGCCTGCTTCTGCCACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264202.8
ENST00000264203.7
ENST00000375142.5
ENST00000674449.1
3UTR-3UTR CCA 90 bp GGAAGAGCCCTCAAAATACTCAGCAGGTGCCATAAGACAAGACCTGGAAGCAAGTGGTGTATCGGGCAGTaGCTGCCAGTGGCAGGCCTA +
Preference number: 2 (lower is better)
Translates to: GRALKILSRCHKTRPGSKWCIGQ*LPVAGL
Trigger: TAGGCCTGCCACTGGCAGCCACTGCCCGATACACCA...CTTGCTTCCAGGTCTTGTCTTATGGCACCTGCTGAGTATTTTGAGGGCTCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR CCA 90 bp GGGCTCTGCAGCCCCAGTTGGCAGGGTTCCAAATGCCTTCTTTTTACAAACAAGGCAGCATCCGTCCCTTaGCCTGGGCTTCTTCAGAAG +
Preference number: 2 (lower is better)
Translates to: GLCSPSWQGSKCLLFTNKAASVP*PGLLQK
Trigger: CTTCTGAAGAAGCCCAGGCCAAGGGACGGATGCTGC...CTTGTTTGTAAAAAGAAGGCATTTGGAACCCTGCCAACTGGGGCTGCAGAGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR CCA 90 bp GTCAAATTCTGGATTTGTGGGGAAACGTTCAGGGCGACCGCATTCACGTATGTGGCGGGGAGGCTTATGTaGCTTCTGGGATCCCTGCAC +
Preference number: 2 (lower is better)
Translates to: VKFWICGETFRATAFTYVAGRLM*LLGSLH
Trigger: GTGCAGGGATCCCAGAAGCCACATAAGCCTCCCCGC...CACATACGTGAATGCGGTCGCCCTGAACGTTTCCCCACAAATCCAGAATTTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR CCA 90 bp TTAACTTGGCCCAGAAAACCCCTCAGCCCGGATTGCAAAGGGCGGCACAGGACAAAGCAGTGGAAAGAGTaGGTAGAGGGCTGCTCAAGA +
Preference number: 2 (lower is better)
Translates to: LTWPRKPLSPDCKGRHRTKQWKE*VEGCSR
Trigger: TCTTGAGCAGCCCTCTACCCACTCTTTCCACTGCTT...TGTCCTGTGCCGCCCTTTGCAATCCGGGCTGAGGGGTTTTCTGGGCCAAGTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR CCA 90 bp TACCAGGCGCCCGATGTTGGCTATGTGTGGGGAGCAGTCACTCACAGTTTCATCACAGCCAAGTGCCCCTaGGATCCCTGCTGTCAAATT +
Preference number: 2 (lower is better)
Translates to: YQAPDVGYVWGAVTHSFITAKCP*DPCCQI
Trigger: AATTTGACAGCAGGGATCCCAGGGGCACTTGGCTGT...GATGAAACTGTGAGTGACTGCTCCCCACACATAGCCAACATCGGGCGCCTGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674228.1
3UTR-3UTR CCA 90 bp CCACAAGTGCAAGGTGCAGCGTTATCCCACCCTTGGGAGTGGGTAAGAACCAGTGCCACAGCATCACCGTaGAGGTCAACTTGTAATGGG +
Preference number: 2 (lower is better)
Translates to: PQVQGAALSHPWEWVRTSATASP*RSTCNG
Trigger: CCCATTACAAGTTGACCTCCACGGTGATGCTGTGGC...ACTGGTTCTTACCCACTCCCAAGGGTGGGATAACGCTGCACCTTGCACTTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674228.1
3UTR-3UTR CCA 90 bp CTGGCTTCCTCAATGTCAGACCTCAGTCAAGTGTCTCCTCAAGAGGCCTCATGGAATAGAACTACAGACTaGGGGCCAAGCCCCACCCAC +
Preference number: 2 (lower is better)
Translates to: LASSMSDLSQVSPQEASWNRTTD*GPSPTH
Trigger: GTGGGTGGGGCTTGGCCCCCAGTCTGTAGTTCTATT...CCATGAGGCCTCTTGAGGAGACACTTGACTGAGGTCTGACATTGAGGAAGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR-3UTR CCA 90 bp GCCTGGCCCCACTGCCCCTGCACATGCAAGGTAAGGAAGGGCCTCCTGCCTCTCAGTCATTTAACCTCTTaGAACCTTGGTCTCATTTGT +
Preference number: 2 (lower is better)
Translates to: AWPHCPCTCKVRKGLLPLSHLTS*NLGLIC
Trigger: ACAAATGAGACCAAGGTTCCAAGAGGTTAAATGACT...GAGAGGCAGGAGGCCCTTCCTTACCTTGCATGTGCAGGGGCAGTGGGGCCAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR-3UTR CCA 90 bp ACACGGCCAGTGCCTGTGGGTGCTACGTCAGCCGACAACAAACATGCCCACAGAAAGGCTGGCCCTAAATaGCGAAGTAAGGCAACACAT +
Preference number: 2 (lower is better)
Translates to: TRPVPVGATSADNKHAHRKAGPK*RSKATH
Trigger: ATGTGTTGCCTTACTTCGCCATTTAGGGCCAGCCTT...TCTGTGGGCATGTTTGTTGTCGGCTGACGTAGCACCCACAGGCACTGGCCGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR-3UTR TCA 90 bp GGGAGAGATGGCGCTGTGCGGTCAATGATGCAGCTGTTATGTGACCTGTCGGGGCGTGTCTGGTTAGCATaGAACAGAGGTTTAGCATTG +
Preference number: 2 (lower is better)
Translates to: GRDGAVRSMMQLLCDLSGRVWLA*NRGLAL
Trigger: CAATGCTAAACCTCTGTTTCATGCTAACCAGACACG...CCCCGACAGGTCACATAACAGCTGCATCATTGACCGCACAGCGCCATCTCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264203.7
ENST00000375142.5
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
ENST00000674449.1
3UTR-3UTR TCA 90 bp CTTGCCAGGCCCTGTGGGGGTGGCATATGGCTTACATGGACAGGTGCTCATCTCCGTGTCTGGTTAGCATaGAACAGAGGTTTAGCATTG +
Preference number: 2 (lower is better)
Translates to: LARPCGGGIWLTWTGAHLRVWLA*NRGLAL
Trigger: CAATGCTAAACCTCTGTTTCATGCTAACCAGACACG...GAGATGAGCACCTGTCCATGTAAGCCATATGCCACCCCCACAGGGCCTGGCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR TCA 90 bp CTGCCTCCGAGGTTCATGGTGCCAGAGCCAGATTTGTTGGTCTGCAGCCACAGCCGTGTCTGGTTAGCATaGAACAGAGGTTTAGCATTG +
Preference number: 2 (lower is better)
Translates to: LPPRFMVPEPDLLVCSHSRVWLA*NRGLAL
Trigger: CAATGCTAAACCTCTGTTTCATGCTAACCAGACACG...GCTGTGGCTGCAGACCAACAAATCTGGCTCTGGCACCATGAACCTCGGAGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674228.1
ENST00000674449.1
3UTR-3UTR TCA 90 bp TCTCGCGGCTCTCAGGCAGGGTACCTGGATCGGCTTAATTATCAGGCTGGATGTAAATGTGGAGAGAACTaGGAGCGAGGTGTGGCAGAA +
Preference number: 2 (lower is better)
Translates to: SRGSQAGYLDRLNYQAGCKCGEN*ERGVAE
Trigger: TTCTGCCACACCTCGCTCTCAGTTCTCTCCACATTT...ACATCCAGCCTGATAATTAAGCCGATCCAGGTACCCTGCCTGAGAGCCGCGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375144.6
3UTR-3UTR TCA 90 bp CTTGCCAGGCCCTGTGGGGGTGGCATATGGCTTACATGGACAGGTGCTCATCTCTACGGAGAGTGCAGATaGCACATCAGGACTTTACTT +
Preference number: 2 (lower is better)
Translates to: LARPCGGGIWLTWTGAHLYGECR*HIRTLL
Trigger: AAGTAAAGTCCTGATGTGTCATCTGCACTCTCCGTA...GAGATGAGCACCTGTCCATGTAAGCCATATGCCACCCCCACAGGGCCTGGCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR TCA 90 bp CTACATCTGGATCTGTCACAAGCTCAAGTCATGGTTCTTGGCCATTACCAACAAGACAAACTGCAGGGCTaGGGAGGCTCCGGGGGCAAG +
Preference number: 2 (lower is better)
Translates to: LHLDLSQAQVMVLGHYQQDKLQG*GGSGGK
Trigger: CTTGCCCCCGGAGCCTCCTCAGCCCTGCAGTTTGTC...TTGTTGGTAATGGCCAAGAACCATGACTTGAGCTTGTGACAGATCCAGATGTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR TCA 90 bp TTTAGTGGGGAGGGTCTCGCGGCTCTCAGGCAGGGTACCTGGATCGGCTTAATTCCAGAGGTAGACAGATaGGACGCCACCTTCAAAATA +
Preference number: 2 (lower is better)
Translates to: FSGEGLAALRQGTWIGLIPEVDR*DATFKI
Trigger: TATTTTGAAGGTGGCGTCTCATCTGTCTACCTCTGG...AATTAAGCCGATCCAGGTACCCTGCCTGAGAGCCGCGAGACCCTCCCCACTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674228.1
3UTR-3UTR TCA 90 bp TCAACTTGTAATGGGCGGTGCGACCGCTGGATTTCTCCTGCACTTCTACCACGTATTATCTTGGGCAGGTaGGCAGGGAGGAATGACTGC +
Preference number: 2 (lower is better)
Translates to: STCNGRCDRWISPALLPRIILGR*AGRNDC
Trigger: GCAGTCATTCCTCCCTGCTCACCTGCCCAAGATAAT...ACGTGGTAGAAGTGCAGGAGAAATCCAGCGGTCGCACCGCCCATTACAAGTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR-3UTR CCA 90 bp ACACCGAGGCCCAAGACCACACAGCTAGTAACTGGCAGAGCCAGGGTTCAAATCATTCTCAGGGAGAGATaGCGCTGTGCGGTCAATGAT +
Preference number: 2 (lower is better)
Translates to: TPRPKTTQLVTGRARVQIILRER*RCAVND
Trigger: ATCATTGACCGCACAGCGCCATCTCTCCCTGAGAAT...GATTTGAACCCTGGCTCTGCCAGTTACTAGCTGTGTGGTCTTGGGCCTCGGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR CCA 90 bp GGGCTCTGCAGCCCCAGTTGGCAGGGTTCCAAATGCCTTCTTTTTACAAACAAGCTCACACGGTGCTGCTaGACTGCAGAGCGTGTTCTA +
Preference number: 2 (lower is better)
Translates to: GLCSPSWQGSKCLLFTNKLTRCC*TAERVL
Trigger: TAGAACACGCTCTGCAGTCCAGCAGCACCGTGTGAG...CTTGTTTGTAAAAAGAAGGCATTTGGAACCCTGCCAACTGGGGCTGCAGAGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR CCA 90 bp CTACATCTGGATCTGTCACAAGCTCAAGTCATGGTTCTTGGCCATTACCAACAAGGCGGCTCTGGGGTGTaGAGTGGTATCGCCGCTGCA +
Preference number: 2 (lower is better)
Translates to: LHLDLSQAQVMVLGHYQQGGSGV*SGIAAA
Trigger: TGCAGCGGCGATACCACTCCACACCCCAGAGCCGCC...TTGTTGGTAATGGCCAAGAACCATGACTTGAGCTTGTGACAGATCCAGATGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR CCA 90 bp ACGTATGTGTGGGGACGCTCATCAACAAAGCCAGAAACAATGAAGGCTTATGGAGGCTACACGGGAATGTaGCTGTGCACCGACCGGGAG +
Preference number: 2 (lower is better)
Translates to: TYVWGRSSTKPETMKAYGGYTGM*LCTDRE
Trigger: CTCCCGGTCGGTGCACAGCCACATTCCCGTGTAGCC...TCCATAAGCCTTCATTGTTTCTGGCTTTGTTGATGAGCGTCCCCACACATACGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR CCA 90 bp TCTCACAGGCCGGGGACACCAGCCACTTTCCTGGCCCCTCAGGCAGCAGCTCAGCTATGTAGAAATACCTaGCACTGTTTCTTATACACA +
Preference number: 2 (lower is better)
Translates to: SHRPGTPATFLAPQAAAQLCRNT*HCFLYT
Trigger: TGTGTATAAGAAACAGTGCCAGGTATTTCTACATAG...CTGAGCTGCTGCCTGAGGGGCCAGGAAAGTGGCTGGTGTCCCCGGCCTGTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR-3UTR CCA 90 bp ACACGGCCAGTGCCTGTGGGTGCTACGTCAGCCGACAACAAACATGCCCACAGAAACAGAGACCTTATGTaGCCTGCAAAGCCTAAAACG +
Preference number: 2 (lower is better)
Translates to: TRPVPVGATSADNKHAHRNRDLM*PAKPKT
Trigger: CGTTTTAGGCTTTGCAGGCCACATAAGGTCTCTGTT...TCTGTGGGCATGTTTGTTGTCGGCTGACGTAGCACCCACAGGCACTGGCCGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR-3UTR CCA 90 bp CCAGGAGAGAGAGCTCTTCAGCACACTCCGATGGCACTGGGTGAGTCAAAATTCGGAGGCCCACTTGCATaGCCACTGGTAACTGTTATC +
Preference number: 2 (lower is better)
Translates to: PGERALQHTPMALGESKFGGPLA*PLVTVI
Trigger: GATAACAGTTACCAGTGGCCATGCAAGTGGGCCTCC...GAATTTTGACTCACCCAGTGCCATCGGAGTGTGCTGAAGAGCTCTCTCTCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR-3UTR CCA 90 bp TCTCACAGGCCGGGGACACCAGCCACTTTCCTGGCCCCTCAGGCAGCAGCTCAGTTTTTAGACTATAAATaGGTTGGTTCGTCACATGTG +
Preference number: 2 (lower is better)
Translates to: SHRPGTPATFLAPQAAAQFLDYK*VGSSHV
Trigger: CACATGTGACGAACCAACCCATTTATAGTCTAAAAA...CTGAGCTGCTGCCTGAGGGGCCAGGAAAGTGGCTGGTGTCCCCGGCCTGTGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR-3UTR TCA 90 bp ACACCGAGGCCCAAGACCACACAGCTAGTAACTGGCAGAGCCAGGGTTCAAATCCAATGGCTGTTAGGGTaGACATGCCCCAGAAAACAA +
Preference number: 2 (lower is better)
Translates to: TPRPKTTQLVTGRARVQIQWLLG*TCPRKQ
Trigger: TTGTTTTCTGGGGCATGTTCACCCTAACAGCCATTG...GATTTGAACCCTGGCTCTGCCAGTTACTAGCTGTGTGGTCTTGGGCCTCGGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR TCA 90 bp TACATCTGGATCTGTCACAAGCTCAAGTCATGGTTCTTGGCCATTACCAACAAGCAGGCAATGTGCCGCTaGGCAGCGGGGAGGCTTATG +
Preference number: 2 (lower is better)
Translates to: YIWICHKLKSWFLAITNKQAMCR*AAGRLM
Trigger: CATAAGCCTCCCCGCTGCTCAGCGGCACATTGCCTG...CTTGTTGGTAATGGCCAAGAACCATGACTTGAGCTTGTGACAGATCCAGATGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR TCA 90 bp GTGTGGCAGAAGCAGGCTCGGAGCCGGAGGAGGGTGGCTATCGGCTTTATTCTCCGTTCAGCGTACTTCTaGTTTTATTTTCCATGTCCT +
Preference number: 2 (lower is better)
Translates to: VWQKQARSRRRVAIGFILRSAYF*FYFPCP
Trigger: AGGACATGGAAAATAAAATCAGAAGTACGCTGAACG...GAGAATAAAGCCGATAGCCACCCTCCTCCGGCTCCGAGCCTGCTTCTGCCACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR-3UTR TCA 90 bp CCAGGAGAGAGAGCTCTTCAGCACACTCCGATGGCACTGGGTGAGTCAAAATTCAGCAGAAGTCCAAGATaGAACTGGGCTCTTCCCCAA +
Preference number: 2 (lower is better)
Translates to: PGERALQHTPMALGESKFSRSPR*NWALPQ
Trigger: TTGGGGAAGAGCCCAGTTTCATCTTGGACTTCTGCT...GAATTTTGACTCACCCAGTGCCATCGGAGTGTGCTGAAGAGCTCTCTCTCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR-3UTR GCA 90 bp TTCTCAGGGAGAGATGGCGCTGTGCGGTCAATGATGCAGCTGTTATGTGACCTGAAGGAATCTAACGAGTaGACGGCGTGTCTGGTTAGC +
Preference number: 2 (lower is better)
Translates to: FSGRDGAVRSMMQLLCDLKESNE*TACLVS
Trigger: GCTAACCAGACACGCCGTGCACTCGTTAGATTCCTT...CAGGTCACATAACAGCTGCATCATTGACCGCACAGCGCCATCTCTCCCTGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000264202.8
ENST00000264203.7
ENST00000375142.5
ENST00000375144.6
ENST00000433834.5
ENST00000674228.1
ENST00000674432.1
ENST00000674449.1
3UTR-3UTR GCA 90 bp CTACATCTGGATCTGTCACAAGCTCAAGTCATGGTTCTTGGCCATTACCAACAAACTGAGGGCCCTGCCTaGACGTTGCGCTCTGCTGTC +
Preference number: 2 (lower is better)
Translates to: LHLDLSQAQVMVLGHYQQTEGPA*TLRSAV
Trigger: GACAGCAGAGCGCAACGTGCAGGCAGGGCCCTCAGT...TTGTTGGTAATGGCCAAGAACCATGACTTGAGCTTGTGACAGATCCAGATGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR GCA 90 bp ACGTATGTGTGGGGACGCTCATCAACAAAGCCAGAAACAATGAAGGCTTATGGAAGGTGGGAAGGATGGTaGAGGACACTGGCCACTGGC +
Preference number: 2 (lower is better)
Translates to: TYVWGRSSTKPETMKAYGRWEGW*RTLATG
Trigger: GCCAGTGGCCAGTGTCCTGCACCATCCTTCCCACCT...TCCATAAGCCTTCATTGTTTCTGGCTTTGTTGATGAGCGTCCCCACACATACGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR GCA 90 bp GAGTGGGTAGAGGGCTGCTCAAGAAGAGTGCTACGGAGAGTGCACTCAGCCGGACAGACATTTGGTTCATaGTGGGGAAATACACGTTTC +
Preference number: 2 (lower is better)
Translates to: EWVEGCSRRVLRRVHSAGQTFGS*WGNTRF
Trigger: GAAACGTGTATTTCCCCAGCATGAACCAAATGTCTG...TCCGGCTGAGTGCACTCTCCGTAGCACTCTTCTTGAGCAGCCCTCTACCCACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR GCA 90 bp GCGTGTCTGGTTAGCATGAAACAGAGGTTTAGCATTGCTGCTTTCTCTTCAAAGACAGGTGCTCATCTCTaGCCCTGGCCACCGGTGACC +
Preference number: 2 (lower is better)
Translates to: ACLVSMKQRFSIAAFSSKTGAHL*PWPPVT
Trigger: GGTCACCGGTGGCCAGGGGCAGAGATGAGCACCTGT...CTTTGAAGAGAAAGCAGCAATGCTAAACCTCTGTTTCATGCTAACCAGACACGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR GCA 90 bp TCAACTTGTAATGGGCGGTGCGACCGCTGGATTTCTCCTGCACTTCTACCACGTAAGTCTGCACAGACCTaGAAGGGAGGAAAGGCGTTA +
Preference number: 2 (lower is better)
Translates to: STCNGRCDRWISPALLPRKSAQT*KGGKAL
Trigger: TAACGCCTTTCCTCCCTTGCAGGTCTGTGCAGACTT...ACGTGGTAGAAGTGCAGGAGAAATCCAGCGGTCGCACCGCCCATTACAAGTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674228.1
3UTR-3UTR GCA 90 bp ACCTGGAGGCCCACTTGCATGGCCACTGGTAACTGTTATCATCACCATCGTTATGAGTGCCCTGCATCCTaGTATGGGAGGCTCCCAATT +
Preference number: 2 (lower is better)
Translates to: TWRPTCMATGNCYHHHRYECPAS*YGRLPI
Trigger: AATTGGGAGCCTCCCATAGCAGGATGCAGGGCACTC...ATAACGATGGTGATGATAACAGTTACCAGTGGCCATGCAAGTGGGCCTCCAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR-3UTR GCA 90 bp ATTAAAGACCCTGTCAACACAGTCTGCTCTTCCAACCCCCAACCACCAGGGGCGGGCCATAAAAGCCCCTaGAGAACCATACACCATGTA +
Preference number: 2 (lower is better)
Translates to: IKDPVNTVCSSNPQPPGAGHKSP*RTIHHV
Trigger: TACATGGTGTATGGTTCTGCAGGGGCTTTTATGGCC...CGCCCCTGGTGGTTGGGGGTTGGAAGAGCAGACTGTGTTGACAGGGTCTTTAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR-3UTR CCA 90 bp AGAGGACTCCTCCTCTGTTTTAAAACTGTAAAGCAGGTGACTGAAATCTGTCGCGGGCTGCCCGGAATGTaGTGTCATGGCTCCCCTAGG +
Preference number: 2 (lower is better)
Translates to: RGLLLCFKTVKQVTEICRGLPGM*CHGSPR
Trigger: CCTAGGGGAGCCATGACACCACATTCCGGGCAGCCC...GCGACAGATTTCAGTCACCTGCTTTACAGTTTTAAAACAGAGGAGGAGTCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR CCA 90 bp CAACTGCTTAAACTTTTGGTTGTCAGGGATAGCATCAATAGATCTACAGAGAGTTGGCGTCAGGGAGGCTaGGGGCCTGAGAAGGCCCGG +
Preference number: 2 (lower is better)
Translates to: QLLKLLVVRDSINRSTESWRQGG*GPEKAR
Trigger: CCGGGCCTTCTCAGGCCCCCAGCCTCCCTGACGCCA...ACTCTCTGTAGATCTATTGATGCTATCCCTGACAACCAAAAGTTTAAGCAGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR CCA 90 bp CAACTGCTTAAACTTTTGGTTGTCAGGGATAGCATCAATAGATCTACAGAGAGTCCCCAGTCCACGAGCTaGGGCAGCCCCGGGACTGCA +
Preference number: 2 (lower is better)
Translates to: QLLKLLVVRDSINRSTESPQSTS*GSPGTA
Trigger: TGCAGTCCCGGGGCTGCCCCAGCTCGTGGACTGGGG...ACTCTCTGTAGATCTATTGATGCTATCCCTGACAACCAAAAGTTTAAGCAGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR CCA 90 bp GGGCTCTGCAGCCCCAGTTGGCAGGGTTCCAAATGCCTTCTTTTTACAAACAAGTGCCTCCGAGGTTCATaGTGCCAGAGCCAGATTTGT +
Preference number: 2 (lower is better)
Translates to: GLCSPSWQGSKCLLFTNKCLRGS*CQSQIC
Trigger: ACAAATCTGGCTCTGGCACCATGAACCTCGGAGGCA...CTTGTTTGTAAAAAGAAGGCATTTGGAACCCTGCCAACTGGGGCTGCAGAGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674228.1
3UTR-3UTR CCA 90 bp ATTCATGCCTCTGGTATCCCGGATGGCAGCTCCAACTGCTGTCCCTTTGGTGGTTCTGACTTTAATTCCTaGCTCTACCCCTTGCTGTGG +
Preference number: 2 (lower is better)
Translates to: IHASGIPDGSSNCCPFGGSDFNS*LYPLLW
Trigger: CCACAGCAAGGGGTAGAGCCAGGAATTAAAGTCAGA...ACCACCAAAGGGACAGCAGTTGGAGCTGCCATCCGGGATACCAGAGGCATGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR-3UTR CCA 90 bp GCTCCAAAGCCACGGGGAAAAGAGCTTGCATTCCAGGGCCTGCTGTGGTCACTTTGGAGTATCCTGAGATaGCTCCCAAGAAGCTTACAT +
Preference number: 2 (lower is better)
Translates to: APKPRGKELAFQGLLWSLWSILR*LPRSLH
Trigger: ATGTAAGCTTCTTGGGAGCCATCTCAGGATACTCCA...AAGTGACCACAGCAGGCCCTGGAATGCAAGCTCTTTTCCCCGTGGCTTTGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR-3UTR CCA 90 bp GCGTGTCTGGTTAGCATGAAACAGAGGTTTAGCATTGCTGCTTTCTCTTCAAAGCCCACCCCAGCTTCCTaGGTAACTGGGACCACAGGC +
Preference number: 2 (lower is better)
Translates to: ACLVSMKQRFSIAAFSSKPTPAS*VTGTTG
Trigger: GCCTGTGGTCCCAGTTACCCAGGAAGCTGGGGTGGG...CTTTGAAGAGAAAGCAGCAATGCTAAACCTCTGTTTCATGCTAACCAGACACGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR-3UTR TCA 90 bp AGGAAGTTAGAAGTGAAATGGTGGAAGGCGGAAGGAGCAGGGGGCTTATTTAAGGCGCTGTGCGGTCAATaGTGCAGCTGTTATGTGACC +
Preference number: 2 (lower is better)
Translates to: RKLEVKWWKAEGAGGLFKALCGQ*CSCYVT
Trigger: GGTCACATAACAGCTGCATCATTGACCGCACAGCGC...CTTAAATAAGCCCCCTGCTCCTTCCGCCTTCCACCATTTCACTTCTAACTTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR TCA 90 bp AGGAAGTTAGAAGTGAAATGGTGGAAGGCGGAAGGAGCAGGGGGCTTATTTAAGGGTTTTCTAAGTGCCTaGCCCCACCTCCACCTTGGA +
Preference number: 2 (lower is better)
Translates to: RKLEVKWWKAEGAGGLFKGFLSA*PHLHLG
Trigger: TCCAAGGTGGAGGTGGGGTCAGGCACTTAGAAAACC...CTTAAATAAGCCCCCTGCTCCTTCCGCCTTCCACCATTTCACTTCTAACTTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR TCA 90 bp AGCGGGTGTCCACTCACTCGTTCACTAAGGCTCGAATGTGGACACGTCCCCCAACATCTTCACATCATATaGTTCTTGGCCCTCATGGAT +
Preference number: 2 (lower is better)
Translates to: SGCPLTRSLRLECGHVPQHLHII*FLALMD
Trigger: ATCCATGAGGGCCAAGAATCATATGATGTGAAGATG...TTGGGGGACGTGTCCACATTCGAGCCTTAGTGAACGAGTGAGTGGACACCCGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR-3UTR GCA 90 bp GGGCAGGGGATCAGAAGACAAGGGTCCAAAGAGGACTCCTCCTCTGTTTTAAAAACGGTGCTGCTGGACTaGAGAGCGTGTTCTAGATTC +
Preference number: 2 (lower is better)
Translates to: GQGIRRQGSKEDSSSVLKTVLLD*RACSRF
Trigger: GAATCTAGAACACGCTCTGCAGTCCAGCAGCACCGT...TTTTAAAACAGAGGAGGAGTCCTCTTTGGACCCTTGTCTTCTGATCCCCTGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR GCA 90 bp GTAGAGGGCTGCTCAAGAAGAGTGCTACGGAGAGTGCACTCAGCCGGACTCTCAAGCTCCCTCTGCAACTaGTTAAACTTTTGGTTGTCA +
Preference number: 2 (lower is better)
Translates to: VEGCSRRVLRRVHSAGLSSSLCN*LNFWLS
Trigger: TGACAACCAAAAGTTTAAGCAGTTGCAGAGGGAGCT...TGAGAGTCCGGCTGAGTGCACTCTCCGTAGCACTCTTCTTGAGCAGCCCTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR GCA 90 bp CTACATCTGGATCTGTCACAAGCTCAAGTCATGGTTCTTGGCCATTACCAACAAGGCTTCTGGGATCCCTaGACCAGCATCAGAGGCTCC +
Preference number: 2 (lower is better)
Translates to: LHLDLSQAQVMVLGHYQQGFWDP*TSIRGS
Trigger: GGAGCCTCTGATGCTGGTGCAGGGATCCCAGAAGCC...TTGTTGGTAATGGCCAAGAACCATGACTTGAGCTTGTGACAGATCCAGATGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR GCA 90 bp GACCAATGGCCTGAGAGAATCCAACTAGGGTCATTCTTTTCGGGGATCAAGCTGCCAGATTTGTTGGTCTaGAGCCACAGCATCACCGTG +
Preference number: 2 (lower is better)
Translates to: DQWPERIQLGSFFSGIKLPDLLV*SHSITV
Trigger: CACGGTGATGCTGTGGCTGCAGACCAACAAATCTGG...CAGCTTGATCCCCGAAAAGAATGACCCTAGTTGGATTCTCTCAGGCCATTGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR-3UTR GCA 90 bp ATTAAAGACCCTGTCAACACAGTCTGCTCTTCCAACCCCCAACCACCAGGGGCGCTCCATATCTCAACATaGAGCCCAGTAATAAGCCAG +
Preference number: 2 (lower is better)
Translates to: IKDPVNTVCSSNPQPPGALHIST*SPVISQ
Trigger: CTGGCTTATTACTGGGCTGCATGTTGAGATATGGAG...CGCCCCTGGTGGTTGGGGGTTGGAAGAGCAGACTGTGTTGACAGGGTCTTTAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR-3UTR CCA 90 bp CTACATCTGGATCTGTCACAAGCTCAAGTCATGGTTCTTGGCCATTACCAACAAAGGTGCCGTGTTACATaGGGCCGAGGCTACACGGGA +
Preference number: 2 (lower is better)
Translates to: LHLDLSQAQVMVLGHYQQRCRVT*GRGYTG
Trigger: TCCCGTGTAGCCTCGGCCCCATGTAACACGGCACCT...TTGTTGGTAATGGCCAAGAACCATGACTTGAGCTTGTGACAGATCCAGATGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR CCA 90 bp CTACATCTGGATCTGTCACAAGCTCAAGTCATGGTTCTTGGCCATTACCAACAAACAAGTGGCTGCTGCTaGAGAGGCAGCATCCGTCCC +
Preference number: 2 (lower is better)
Translates to: LHLDLSQAQVMVLGHYQQTSGCC*RGSIRP
Trigger: GGGACGGATGCTGCCTCTCCAGCAGCAGCCACTTGT...TTGTTGGTAATGGCCAAGAACCATGACTTGAGCTTGTGACAGATCCAGATGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR CCA 90 bp ACGTATGTGTGGGGACGCTCATCAACAAAGCCAGAAACAATGAAGGCTTATGGAGGTCACTGGCTCTTCTaGGAAGGAAGAGCCAAGCCC +
Preference number: 2 (lower is better)
Translates to: TYVWGRSSTKPETMKAYGGHWLF*EGRAKP
Trigger: GGGCTTGGCTCTTCCTTCCCAGAAGAGCCAGTGACC...TCCATAAGCCTTCATTGTTTCTGGCTTTGTTGATGAGCGTCCCCACACATACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR CCA 90 bp TCCATCTGTCTGGTAAGGCTGCCTCCGAGGTTCATGGTGCCAGAGCCAGATTTGCCTGCTGTCAAATTCTaGATTTGTGGGGAAACGTTC +
Preference number: 2 (lower is better)
Translates to: SICLVRLPPRFMVPEPDLPAVKF*ICGETF
Trigger: GAACGTTTCCCCACAAATCCAGAATTTGACAGCAGG...CAAATCTGGCTCTGGCACCATGAACCTCGGAGGCAGCCTTACCAGACAGATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674228.1
3UTR-3UTR CCA 90 bp GACCAATGGCCTGAGAGAATCCAACTAGGGTCATTCTTTTCGGGGATCAAGCTGTGCACTTCTACCACGTaGATGGAATCCCAGCAGCCT +
Preference number: 2 (lower is better)
Translates to: DQWPERIQLGSFFSGIKLCTSTT*MESQQP
Trigger: AGGCTGCTGGGATTCCATCCACGTGGTAGAAGTGCA...CAGCTTGATCCCCGAAAAGAATGACCCTAGTTGGATTCTCTCAGGCCATTGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR-3UTR CCA 90 bp CAAGCTGAAGAATCCTTGCATTTTGACCCGTGGAGGAGAAGGCAAGGAATAAAGGGGCGGTGCGACCGCTaGATTTCTCCTGCACTTCTA +
Preference number: 2 (lower is better)
Translates to: QAEESLHFDPWRRRQGIKGRCDR*ISPALL
Trigger: TAGAAGTGCAGGAGAAATCCAGCGGTCGCACCGCCC...CTTTATTCCTTGCCTTCTCCTCCACGGGTCAAAATGCAAGGATTCTTCAGCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR-3UTR CCA 90 bp TTTGGAAACGTAAGCAGCGGGTGTCCACTCACTCGTTCACTAAGGCTCGAATGTTGCCTCCGAGGTTCATaGTGCCAGAGCCAGATTTGT +
Preference number: 2 (lower is better)
Translates to: FGNVSSGCPLTRSLRLECCLRGS*CQSQIC
Trigger: ACAAATCTGGCTCTGGCACCATGAACCTCGGAGGCA...ACATTCGAGCCTTAGTGAACGAGTGAGTGGACACCCGCTGCTTACGTTTCCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR-3UTR CCA 90 bp GACCAATGGCCTGAGAGAATCCAACTAGGGTCATTCTTTTCGGGGATCAAGCTGGATGGGAATCCACTCTaGCCTCTTGTTCAGCCTCTG +
Preference number: 2 (lower is better)
Translates to: DQWPERIQLGSFFSGIKLDGNPL*PLVQPL
Trigger: CAGAGGCTGAACAAGAGGCCAGAGTGGATTCCCATC...CAGCTTGATCCCCGAAAAGAATGACCCTAGTTGGATTCTCTCAGGCCATTGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR CAA 90 bp GGCTTAATTATCAGGCTGGATGTAGATCTGGCGCTGGGTCAGCACTaGAGAGAGCTCCCTCTGCAACTGCTTAAACTTTTGGTTGTCAGG +
Preference number: 2 (lower is better)
Translates to: GLIIRLDVDLALGQH*RELPLQLLKLLVVR
Trigger: CCTGACAACCAAAAGTTTAAGCAGTTGCAGAGGGAGCTCTCTCAAGTGCTGACCCAGCGCCAGATCTACATCCAGCCTGATAATTAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR GCA 90 bp TCAACTTGTAATGGGCGGTGCGACCGCTGGATTTCTCCTGCACTTCTACCACGTGTTGTCTTAGCTACTTaGAAGGCTGAGGCAGAAGAT +
Preference number: 2 (lower is better)
Translates to: STCNGRCDRWISPALLPRVVLAT*KAEAED
Trigger: ATCTTCTGCCTCAGCCTTGCAAGTAGCTAAGACAAC...ACGTGGTAGAAGTGCAGGAGAAATCCAGCGGTCGCACCGCCCATTACAAGTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR-3UTR GCA 90 bp GACCAATGGCCTGAGAGAATCCAACTAGGGTCATTCTTTTCGGGGATCAAGCTGAAAGGATGGAAGGCCTaGTGGGTGCCAATATGCAGA +
Preference number: 2 (lower is better)
Translates to: DQWPERIQLGSFFSGIKLKGWKA*WVPICR
Trigger: TCTGCATATTGGCACCCAGCAGGCCTTCCATCCTTT...CAGCTTGATCCCCGAAAAGAATGACCCTAGTTGGATTCTCTCAGGCCATTGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR-3UTR CCA 90 bp ATATGGCTTACATGGACAGGTGCTCATCTCTGCCCCTGGCCACCGGTGACCCGGATTTACCCAACATATTaGTTAGGCAAAGACTTCCTA +
Preference number: 2 (lower is better)
Translates to: IWLTWTGAHLCPWPPVTRIYPTY*LGKDFL
Trigger: TAGGAAGTCTTTGCCTAACCAATATGTTGGGTAAAT...CCGGGTCACCGGTGGCCAGGGGCAGAGATGAGCACCTGTCCATGTAAGCCATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR CCA 90 bp TCCATCTGTCTGGTAAGGCTGCCTCCGAGGTTCATGGTGCCAGAGCCAGATTTGCTCATTATCTGGCTATaGCGAAAGACAGCTCTTGAT +
Preference number: 2 (lower is better)
Translates to: SICLVRLPPRFMVPEPDLLIIWL*RKTALD
Trigger: ATCAAGAGCTGTCTTTCGCCATAGCCAGATAATGAG...CAAATCTGGCTCTGGCACCATGAACCTCGGAGGCAGCCTTACCAGACAGATGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR-3UTR CCA 90 bp TCCATCTGTCTGGTAAGGCTGCCTCCGAGGTTCATGGTGCCAGAGCCAGATTTGATCTCTCTCATTATCTaGCTATGGCGAAAGACAGCT +
Preference number: 2 (lower is better)
Translates to: SICLVRLPPRFMVPEPDLISLII*LWRKTA
Trigger: AGCTGTCTTTCGCCATAGCCAGATAATGAGAGAGAT...CAAATCTGGCTCTGGCACCATGAACCTCGGAGGCAGCCTTACCAGACAGATGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR-3UTR CCA 90 bp GGATGTCTCTTCCACCTTTACCTCACTGGCCTGGATACTTTCCCAGCCCTGATGACCACTAATCATAAATaGCCTGGTTCCGAGAAGGGT +
Preference number: 2 (lower is better)
Translates to: GCLFHLYLTGLDTFPALMTTNHK*PGSEKG
Trigger: ACCCTTCTCGGAACCAGGCCATTTATGATTAGTGGT...CATCAGGGCTGGGAAAGTATCCAGGCCAGTGAGGTAAAGGTGGAAGAGACATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR CAA 90 bp GCTATGACTCCCGGCTCCTGTGGTTTTCTAGCTGTGTTAACCAGCTaGAGTACTTATCTGAGCCTCAGCTTCATCAGCTGCCAAATGGAA +
Preference number: 2 (lower is better)
Translates to: AMTPGSCGFLAVLTS*STYLSLSFISCQME
Trigger: TTCCATTTGGCAGCTGATGAAGCTGAGGCTCAGATAAGTACTCAAGCTGGTTAACACAGCTAGAAAACCACAGGAGCCGGGAGTCATAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR-3UTR TCA 90 bp TCCCTGCTGTCAAATTCTGGATTTGTGGGGAAACGTTCAGGGCGACCGCATTCACGTGTCTGGTTAGCATaGAACAGAGGTTTAGCATTG +
Preference number: 2 (lower is better)
Translates to: SLLSNSGFVGKRSGRPHSRVWLA*NRGLAL
Trigger: CAATGCTAAACCTCTGTTTCATGCTAACCAGACACG...TGAATGCGGTCGCCCTGAACGTTTCCCCACAAATCCAGAATTTGACAGCAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR TCA 90 bp TTTGGAAACGTAAGCAGCGGGTGTCCACTCACTCGTTCACTAAGGCTCGAATGTCCAGAGGTAGACAGATaGGACGCCACCTTCAAAATA +
Preference number: 2 (lower is better)
Translates to: FGNVSSGCPLTRSLRLECPEVDR*DATFKI
Trigger: TATTTTGAAGGTGGCGTCTCATCTGTCTACCTCTGG...ACATTCGAGCCTTAGTGAACGAGTGAGTGGACACCCGCTGCTTACGTTTCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR-3UTR TCA 90 bp GGATGTCTCTTCCACCTTTACCTCACTGGCCTGGATACTTTCCCAGCCCTGATGTTCAAAACATCTGACTaGTCCCAGATTACACGAGAC +
Preference number: 2 (lower is better)
Translates to: GCLFHLYLTGLDTFPALMFKTSD*SQITRD
Trigger: GTCTCGTGTAATCTGGGATCAGTCAGATGTTTTGAA...CATCAGGGCTGGGAAAGTATCCAGGCCAGTGAGGTAAAGGTGGAAGAGACATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR-3UTR TCA 90 bp TACCAGGCGCCCGATGTTGGCTATGTGTGGGGAGCAGTCACTCACAGTTTCATCTACTTTCAAAACATCTaGCTGATCCCAGATTACACG +
Preference number: 2 (lower is better)
Translates to: YQAPDVGYVWGAVTHSFIYFQNI*LIPDYT
Trigger: CGTGTAATCTGGGATCAGTCAGATGTTTTGAAAGTA...GATGAAACTGTGAGTGACTGCTCCCCACACATAGCCAACATCGGGCGCCTGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR-3UTR GCA 90 bp CAACTGCTTAAACTTTTGGTTGTCAGGGATAGCATCAATAGATCTACAGAGAGTCGGGGACTGACAAACTaGAGGGCTGAGGAGGCTCCG +
Preference number: 2 (lower is better)
Translates to: QLLKLLVVRDSINRSTESRGLTN*RAEEAP
Trigger: CGGAGCCTCCTCAGCCCTGCAGTTTGTCAGTCCCCG...ACTCTCTGTAGATCTATTGATGCTATCCCTGACAACCAAAAGTTTAAGCAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR GCA 90 bp CTACATCTGGATCTGTCACAAGCTCAAGTCATGGTTCTTGGCCATTACCAACAACACACACGTGATAGGTaGCGTGTTACATGGGGCCGA +
Preference number: 2 (lower is better)
Translates to: LHLDLSQAQVMVLGHYQQHTRDR*RVTWGR
Trigger: TCGGCCCCATGTAACACGGCACCTATCACGTGTGTG...TTGTTGGTAATGGCCAAGAACCATGACTTGAGCTTGTGACAGATCCAGATGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR GCA 90 bp CTACATCTGGATCTGTCACAAGCTCAAGTCATGGTTCTTGGCCATTACCAACAAACTCTCCAGGGATGCTaGCTCCTTCCCTACATCTGG +
Preference number: 2 (lower is better)
Translates to: LHLDLSQAQVMVLGHYQQTLQGC*LLPYIW
Trigger: CCAGATGTAGGGAAGGAGGCAGCATCCCTGGAGAGT...TTGTTGGTAATGGCCAAGAACCATGACTTGAGCTTGTGACAGATCCAGATGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR GCA 90 bp TTAACCAGCTTGAGTACTTATCTGAGCCTCAGCTTCATCAGCTGCCAAATGGAAACCAAACGAGTGCCCTaGATCCTGCTATGGGAGGCT +
Preference number: 2 (lower is better)
Translates to: LTSLSTYLSLSFISCQMETKRVP*ILLWEA
Trigger: AGCCTCCCATAGCAGGATGCAGGGCACTCGTTTGGT...TTCCATTTGGCAGCTGATGAAGCTGAGGCTCAGATAAGTACTCAAGCTGGTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR-3UTR GCA 90 bp CTGGCTTCCTCAATGTCAGACCTCAGTCAAGTGTCTCCTCAAGAGGCCTCATGGTGTACCAGTGGCACCTaGTGTTATTATGAATCACGA +
Preference number: 2 (lower is better)
Translates to: LASSMSDLSQVSPQEASWCTSGT*CYYESR
Trigger: TCGTGATTCATAATAACAGCAGGTGCCACTGGTACA...CCATGAGGCCTCTTGAGGAGACACTTGACTGAGGTCTGACATTGAGGAAGCCAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR-3UTR GCA 90 bp ACCTGGAGGCCCACTTGCATGGCCACTGGTAACTGTTATCATCACCATCGTTATAGATGTTTGCTGCTCTaGTCCTGCTCTGTAAGGACT +
Preference number: 2 (lower is better)
Translates to: TWRPTCMATGNCYHHHRYRCLLL*SCSVRT
Trigger: AGTCCTTACAGAGCAGGAGCAGAGCAGCAAACATCT...ATAACGATGGTGATGATAACAGTTACCAGTGGCCATGCAAGTGGGCCTCCAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR-3UTR GCA 90 bp TCAACTTGTAATGGGCGGTGCGACCGCTGGATTTCTCCTGCACTTCTACCACGTGAAGTGACCAATGTTTaGAAGCAGAGACTTTCTTGC +
Preference number: 2 (lower is better)
Translates to: STCNGRCDRWISPALLPREVTNV*KQRLSC
Trigger: GCAAGAAAGTCTCTGCTTGCAAACATTGGTCACTTC...ACGTGGTAGAAGTGCAGGAGAAATCCAGCGGTCGCACCGCCCATTACAAGTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR-3UTR CCA 90 bp CAACTGCTTAAACTTTTGGTTGTCAGGGATAGCATCAATAGATCTACAGAGAGTCAGGACACTGGCCACTaGCAGCAGAGCCCTGGCAGA +
Preference number: 2 (lower is better)
Translates to: QLLKLLVVRDSINRSTESQDTGH*QQSPGR
Trigger: TCTGCCAGGGCTCTGCTGCCAGTGGCCAGTGTCCTG...ACTCTCTGTAGATCTATTGATGCTATCCCTGACAACCAAAAGTTTAAGCAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR CCA 90 bp GCGTGTCTGGTTAGCATGAAACAGAGGTTTAGCATTGCTGCTTTCTCTTCAAAGGCGGGAAAGTGTGTTTaGTGTATCGGGCAGTGGCTG +
Preference number: 2 (lower is better)
Translates to: ACLVSMKQRFSIAAFSSKAGKCV*CIGQWL
Trigger: CAGCCACTGCCCGATACACCAAACACACTTTCCCGC...CTTTGAAGAGAAAGCAGCAATGCTAAACCTCTGTTTCATGCTAACCAGACACGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR CCA 90 bp AGGAGAAACGCAGACATTTGGTTCATGCTGGGGAAATACACGTTTCTGAGTATCCCTCGAATCAGCGCTTaGAGACAGTGCTCGACTCTG +
Preference number: 2 (lower is better)
Translates to: RRNADIWFMLGKYTFLSIPRISA*RQCSTL
Trigger: CAGAGTCGAGCACTGTCTCCAAGCGCTGATTCGAGG...GATACTCAGAAACGTGTATTTCCCCAGCATGAACCAAATGTCTGCGTTTCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR CCA 90 bp GCGTGTCTGGTTAGCATGAAACAGAGGTTTAGCATTGCTGCTTTCTCTTCAAAGACAGGACCTCTAGCCTaGGTGGTCACTGGCTCTTCT +
Preference number: 2 (lower is better)
Translates to: ACLVSMKQRFSIAAFSSKTGPLA*VVTGSS
Trigger: AGAAGAGCCAGTGACCACCCAGGCTAGAGGTCCTGT...CTTTGAAGAGAAAGCAGCAATGCTAAACCTCTGTTTCATGCTAACCAGACACGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR CCA 90 bp AGCGAGGAGTTCAAAGCCAGGCCATCAATCAGAAAGTGGCTTCTGAAGCATGTCCTAAAGGAGGTGAGGTaGCCATATGTACCTTACAGG +
Preference number: 2 (lower is better)
Translates to: SEEFKARPSIRKWLLKHVLKEVR*PYVPYR
Trigger: CCTGTAAGGTACATATGGCCACCTCACCTCCTTTAG...GACATGCTTCAGAAGCCACTTTCTGATTGATGGCCTGGCTTTGAACTCCTCGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR-3UTR CCA 90 bp CAAGCTGAAGAATCCTTGCATTTTGACCCGTGGAGGAGAAGGCAAGGAATAAAGCAGACCATGGTGGACTaGATCCATTCCCCCACAGTT +
Preference number: 2 (lower is better)
Translates to: QAEESLHFDPWRRRQGIKQTMVD*IHSPTV
Trigger: AACTGTGGGGGAATGGATCCAGTCCACCATGGTCTG...CTTTATTCCTTGCCTTCTCCTCCACGGGTCAAAATGCAAGGATTCTTCAGCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR-3UTR TCA 90 bp GCGTGTCTGGTTAGCATGAAACAGAGGTTTAGCATTGCTGCTTTCTCTTCAAAGGTGTCTCTGCGTGTCTaGGCACACTGTGTTTATGGC +
Preference number: 2 (lower is better)
Translates to: ACLVSMKQRFSIAAFSSKVSLRV*AHCVYG
Trigger: GCCATAAACACAGTGTGCTCAGACACGCAGAGACAC...CTTTGAAGAGAAAGCAGCAATGCTAAACCTCTGTTTCATGCTAACCAGACACGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR TCA 90 bp ATTAAAGACCCTGTCAACACAGTCTGCTCTTCCAACCCCCAACCACCAGGGGCGCACTCAAATGTCTGCTaGGTAAATAAATCGATGTTG +
Preference number: 2 (lower is better)
Translates to: IKDPVNTVCSSNPQPPGAHSNVC*VNKSML
Trigger: CAACATCGATTTATTTACTCAGCAGACATTTGAGTG...CGCCCCTGGTGGTTGGGGGTTGGAAGAGCAGACTGTGTTGACAGGGTCTTTAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR-3UTR TCA 90 bp TACCAGGCGCCCGATGTTGGCTATGTGTGGGGAGCAGTCACTCACAGTTTCATCCAGATCCTAATTTGTTaGAAAGTCATGCTCCATTTC +
Preference number: 2 (lower is better)
Translates to: YQAPDVGYVWGAVTHSFIQILIC*KVMLHF
Trigger: GAAATGGAGCATGACTTTTCAACAAATTAGGATCTG...GATGAAACTGTGAGTGACTGCTCCCCACACATAGCCAACATCGGGCGCCTGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR-3UTR GCA 90 bp GCGTGTCTGGTTAGCATGAAACAGAGGTTTAGCATTGCTGCTTTCTCTTCAAAGGCTGCTCAAGAAGAGTaGTACGGAGAGTGCACTCAG +
Preference number: 2 (lower is better)
Translates to: ACLVSMKQRFSIAAFSSKAAQEE*YGECTQ
Trigger: CTGAGTGCACTCTCCGTAGCACTCTTCTTGAGCAGC...CTTTGAAGAGAAAGCAGCAATGCTAAACCTCTGTTTCATGCTAACCAGACACGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR GCA 90 bp AACCCAACCACCAAACGAGTGCCCTGCATCCTGCTATGGGAGGCTCCCAATTTTTTCCAGATAGAACACTaGCACTTAGGATTTACCTCT +
Preference number: 2 (lower is better)
Translates to: NPTTKRVPCILLWEAPNFFQIEH*HLGFTS
Trigger: AGAGGTAAATCCTAAGTGGCAGTGTTCTATCTGGAA...AAAATTGGGAGCCTCCCATAGCAGGATGCAGGGCACTCGTTTGGTGGTTGGGTT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR-3UTR GCA 90 bp CCAGGAGAGAGAGCTCTTCAGCACACTCCGATGGCACTGGGTGAGTCAAAATTCTATTATGAATCACGATaGAGGGGAACAGCACATAGT +
Preference number: 2 (lower is better)
Translates to: PGERALQHTPMALGESKFYYESR*RGTAHS
Trigger: ACTATGTGCTGTTCCCCTGCATCGTGATTCATAATA...GAATTTTGACTCACCCAGTGCCATCGGAGTGTGCTGAAGAGCTCTCTCTCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR-3UTR GCA 90 bp GACCAATGGCCTGAGAGAATCCAACTAGGGTCATTCTTTTCGGGGATCAAGCTGGATGTTTTGGCCATCTaGAAAGGAAGGTCATTTCCC +
Preference number: 2 (lower is better)
Translates to: DQWPERIQLGSFFSGIKLDVLAI*KGRSFP
Trigger: GGGAAATGACCTTCCTTTGCAGATGGCCAAAACATC...CAGCTTGATCCCCGAAAAGAATGACCCTAGTTGGATTCTCTCAGGCCATTGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR-3UTR CCA 90 bp AGGAAGTTAGAAGTGAAATGGTGGAAGGCGGAAGGAGCAGGGGGCTTATTTAAGAAAAGCAGCTCCACCTaGTTTTCTAAGTGCCTGACC +
Preference number: 2 (lower is better)
Translates to: RKLEVKWWKAEGAGGLFKKSSST*FSKCLT
Trigger: GGTCAGGCACTTAGAAAACCAGGTGGAGCTGCTTTT...CTTAAATAAGCCCCCTGCTCCTTCCGCCTTCCACCATTTCACTTCTAACTTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR CCA 90 bp TTAACCAGCTTGAGTACTTATCTGAGCCTCAGCTTCATCAGCTGCCAAATGGAAGGCAGGCTGTATTCCTaGAGTATCCTGAGATGGCTC +
Preference number: 2 (lower is better)
Translates to: LTSLSTYLSLSFISCQMEGRLYS*SILRWL
Trigger: GAGCCATCTCAGGATACTCCAGGAATACAGCCTGCC...TTCCATTTGGCAGCTGATGAAGCTGAGGCTCAGATAAGTACTCAAGCTGGTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR CAA 90 bp TCTTTCAAATTGACTTCCAATTTAAAAGAGGCTGAGGGTGTGCACTaGCTGGTTGACAGCTGTGTGTGCACATTAAGGGGCACCAGTCTC +
Preference number: 2 (lower is better)
Translates to: SFKLTSNLKEAEGVH*LVDSCVCTLRGTSL
Trigger: GAGACTGGTGCCCCTTAATGTGCACACACAGCTGTCAACCAGCAAGTGCACACCCTCAGCCTCTTTTAAATTGGAAGTCAATTTGAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR-3UTR TCA 90 bp GCGTGTCTGGTTAGCATGAAACAGAGGTTTAGCATTGCTGCTTTCTCTTCAAAGCTCCAGCCTTCTTTATaGGGATCACTCCAGCAAAGC +
Preference number: 2 (lower is better)
Translates to: ACLVSMKQRFSIAAFSSKLQPSL*GSLQQS
Trigger: GCTTTGCTGGAGTGATCCTCATAAAGAAGGCTGGAG...CTTTGAAGAGAAAGCAGCAATGCTAAACCTCTGTTTCATGCTAACCAGACACGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674228.1
ENST00000674449.1
3UTR-3UTR TCA 90 bp AAAAAGGCAAAGGATGGAAGGCCTGCTGGGTGCCAATATGCAGAAACAAACTCCGCCTTTGATCTTCTTTaGTCCATCTCCAGCCTTCTT +
Preference number: 2 (lower is better)
Translates to: KKAKDGRPAGCQYAETNSAFDLL*SISSLL
Trigger: AAGAAGGCTGGAGATGGATCAAAGAAGATCAAAGGC...GGAGTTTGTTTCTGCATATTGGCACCCAGCAGGCCTTCCATCCTTTGCCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR-3UTR TCA 90 bp TTTAAGGGACAATGCTTGGGAAGGTCACGGCCAAGCAACCTCGAATCAGCGCTTATTACCTCAGCCCATTaGCGATATCCTTTGTTTTTC +
Preference number: 2 (lower is better)
Translates to: FKGQCLGRSRPSNLESALITSAH*RYPLFF
Trigger: GAAAAACAAAGGATATCGTCAATGGGCTGAGGTAAT...AAGCGCTGATTCGAGGTTGCTTGGCCGTGACCTTCCCAAGCATTGTCCCTTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674228.1
3UTR-3UTR TCA 90 bp TTAACCAGCTTGAGTACTTATCTGAGCCTCAGCTTCATCAGCTGCCAAATGGAAATTCCTGGAGTATCCTaGGATGGCTCCCAAGAAGCT +
Preference number: 2 (lower is better)
Translates to: LTSLSTYLSLSFISCQMEIPGVS*DGSQEA
Trigger: AGCTTCTTGGGAGCCATCTCAGGATACTCCAGGAAT...TTCCATTTGGCAGCTGATGAAGCTGAGGCTCAGATAAGTACTCAAGCTGGTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR-3UTR TCA 90 bp CAAGCTGAAGAATCCTTGCATTTTGACCCGTGGAGGAGAAGGCAAGGAATAAAGACTAAGCCTCAGAGGTaGTCTCTCTCATTATCTGGC +
Preference number: 2 (lower is better)
Translates to: QAEESLHFDPWRRRQGIKTKPQR*SLSLSG
Trigger: GCCAGATAATGAGAGAGATCACCTCTGAGGCTTAGT...CTTTATTCCTTGCCTTCTCCTCCACGGGTCAAAATGCAAGGATTCTTCAGCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR-3UTR GCA 90 bp TTTCTAAGAAAGGAATCTAACGAGTGCACGGCGTGTCTGGTTAGCATGAAACAGAAGGAATCTAACGAGTaGACGGCGTGTCTGGTTAGC +
Preference number: 2 (lower is better)
Translates to: FLRKESNECTACLVSMKQKESNE*TACLVS
Trigger: GCTAACCAGACACGCCGTGCACTCGTTAGATTCCTT...CTGTTTCATGCTAACCAGACACGCCGTGCACTCGTTAGATTCCTTTCTTAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000264202.8
ENST00000264203.7
ENST00000375142.5
ENST00000375144.6
ENST00000433834.5
ENST00000674228.1
ENST00000674432.1
ENST00000674449.1
3UTR-3UTR CCA 90 bp GCGTGTCTGGTTAGCATGAAACAGAGGTTTAGCATTGCTGCTTTCTCTTCAAAGGGTCAAAGGCATTGTTaGCTTCCACCTCCAGCTTTC +
Preference number: 2 (lower is better)
Translates to: ACLVSMKQRFSIAAFSSKGQRHC*LPPPAF
Trigger: GAAAGCTGGAGGTGGAAGCCAACAATGCCTTTGACC...CTTTGAAGAGAAAGCAGCAATGCTAAACCTCTGTTTCATGCTAACCAGACACGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674228.1
ENST00000674449.1
3UTR-3UTR CCA 90 bp AGGAAGTTAGAAGTGAAATGGTGGAAGGCGGAAGGAGCAGGGGGCTTATTTAAGTACAGGTCTCGATACTaGTCAAAGGCATTGTTGGCT +
Preference number: 2 (lower is better)
Translates to: RKLEVKWWKAEGAGGLFKYRSRY*SKALLA
Trigger: AGCCAACAATGCCTTTGACCAGTATCGAGACCTGTA...CTTAAATAAGCCCCCTGCTCCTTCCGCCTTCCACCATTTCACTTCTAACTTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674228.1
3UTR-3UTR CCA 90 bp GCGTGTCTGGTTAGCATGAAACAGAGGTTTAGCATTGCTGCTTTCTCTTCAAAGGATGTTGGCTATGTGTaGGGAGCAGTCACTCACAGT +
Preference number: 2 (lower is better)
Translates to: ACLVSMKQRFSIAAFSSKDVGYV*GAVTHS
Trigger: ACTGTGAGTGACTGCTCCCCACACATAGCCAACATC...CTTTGAAGAGAAAGCAGCAATGCTAAACCTCTGTTTCATGCTAACCAGACACGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674228.1
ENST00000674449.1
3UTR-3UTR CCA 90 bp GCGTGTCTGGTTAGCATGAAACAGAGGTTTAGCATTGCTGCTTTCTCTTCAAAGGTAATCAGACCATGGTaGACTGGATCCATTCCCCCA +
Preference number: 2 (lower is better)
Translates to: ACLVSMKQRFSIAAFSSKVIRPW*TGSIPP
Trigger: TGGGGGAATGGATCCAGTCCACCATGGTCTGATTAC...CTTTGAAGAGAAAGCAGCAATGCTAAACCTCTGTTTCATGCTAACCAGACACGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR CAA 90 bp TTCTCTTCAAAGCCTCCACCAGGTCATTCTTCAGAGCTTCTTGTTTaGATTTGTCTGCAAAAGTCTGCACAGACCTGCAAGGGAGGAAAG +
Preference number: 2 (lower is better)
Translates to: FSSKPPPGHSSELLV*ICLQKSAQTCKGGK
Trigger: CTTTCCTCCCTTGCAGGTCTGTGCAGACTTTTGCAGACAAATCAAAACAAGAAGCTCTGAAGAATGACCTGGTGGAGGCTTTGAAGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR TCA 90 bp AAGCAACTCCCAAACACACACGGAATAAGATTTCCAGTTTTTCTTCTCTCTTTCGCGCTGTGCGGTCAATaGTGCAGCTGTTATGTGACC +
Preference number: 2 (lower is better)
Translates to: KQLPNTHGIRFPVFLLSFALCGQ*CSCYVT
Trigger: GGTCACATAACAGCTGCATCATTGACCGCACAGCGC...GAAAGAGAGAAGAAAAACTGGAAATCTTATTCCGTGTGTGTTTGGGAGTTGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264202.8
ENST00000264203.7
ENST00000375142.5
3UTR-3UTR TCA 90 bp GCGTGTCTGGTTAGCATGAAACAGAGGTTTAGCATTGCTGCTTTCTCTTCAAAGGCATTCCATAGAAATTaGCAGAAAAGCACCTGGCCG +
Preference number: 2 (lower is better)
Translates to: ACLVSMKQRFSIAAFSSKAFHRN*QKSTWP
Trigger: CGGCCAGGTGCTTTTCTGTCAATTTCTATGGAATGC...CTTTGAAGAGAAAGCAGCAATGCTAAACCTCTGTTTCATGCTAACCAGACACGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264203.7
ENST00000375142.5
3UTR-3UTR TCA 90 bp ACCTGGAGGCCCACTTGCATGGCCACTGGTAACTGTTATCATCACCATCGTTATACTACCATAGAGCAATaGGTCAGCTTTTCAGTATCA +
Preference number: 2 (lower is better)
Translates to: TWRPTCMATGNCYHHHRYTTIEQ*VSFSVS
Trigger: TGATACTGAAAAGCTGACTCATTGCTCTATGGTAGT...ATAACGATGGTGATGATAACAGTTACCAGTGGCCATGCAAGTGGGCCTCCAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR-3UTR TCA 90 bp TTAACCAGCTTGAGTACTTATCTGAGCCTCAGCTTCATCAGCTGCCAAATGGAACTTGTGAAGACCGAATaGGACAGAGAATACCTGGAG +
Preference number: 2 (lower is better)
Translates to: LTSLSTYLSLSFISCQMELVKTE*DREYLE
Trigger: CTCCAGGTATTCTCTGTCTCATTCGGTCTTCACAAG...TTCCATTTGGCAGCTGATGAAGCTGAGGCTCAGATAAGTACTCAAGCTGGTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR-3UTR GCA 90 bp AGTCAAAGGCACACAGAAATCAAAAGCCACCTTACAAATACACATTTCCCAGGGTTGCTGCTCTGCTCCTaGTCTGTAAGGACTGCACTT +
Preference number: 2 (lower is better)
Translates to: SQRHTEIKSHLTNTHFPGLLLCS*SVRTAL
Trigger: AAGTGCAGTCCTTACAGAGCAGGAGCAGAGCAGCAA...CCCTGGGAAATGTGTATTTGTAAGGTGGCTTTTGATTTCTGTGTGCCTTTGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR CAA 90 bp TACATAACAAGTCAGCTGCTCCCTGTTATCACTAGCAGCAATGACTaGTTCACTGGTCCACTGTTTGTTTTTCCACAATGGAGTGTGGTG +
Preference number: 2 (lower is better)
Translates to: YITSQLLPVITSSND*FTGPLFVFPQWSVV
Trigger: CACCACACTCCATTGTGGAAAAACAAACAGTGGACCAGTGAACAAGTCATTGCTGCTAGTGATAACAGGGAGCAGCTGACTTGTTATGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR-3UTR TCA 90 bp GCTCTGCAGCCCCAGTTGGCAGGGTTCCAAATGCCTTCTTTTTACAAACAAGTTCGTTCAGCGTACTTCTaGTTTTATTTTCCATGTCCT +
Preference number: 2 (lower is better)
Translates to: ALQPQLAGFQMPSFYKQVRSAYF*FYFPCP
Trigger: AGGACATGGAAAATAAAATCAGAAGTACGCTGAACG...AACTTGTTTGTAAAAAGAAGGCATTTGGAACCCTGCCAACTGGGGCTGCAGAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000674228.1
3UTR-3UTR GCA 90 bp TGCCTAGTTAAACAGATTCACGGCTATTTTTGGTTTGCTCTTAAAAAGGCAAAGCTGCCTTGGCCTGGCTaGCAAGCATCCCTCACATTT +
Preference number: 2 (lower is better)
Translates to: CLVKQIHGYFWFALKKAKLPWPG*QASLTF
Trigger: AAATGTGAGGGATGCTTGGCAGCCAGGCCAAGGCAG...CTTTGCCTTTTTAAGAGCAAACCAAAAATAGCCGTGAATCTGTTTAACTAGGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR-3UTR CCA 90 bp GCGTGTCTGGTTAGCATGAAACAGAGGTTTAGCATTGCTGCTTTCTCTTCAAAGTACAGGTCTCGATACTaGTCAAAGGCATTGTTGGCT +
Preference number: 2 (lower is better)
Translates to: ACLVSMKQRFSIAAFSSKYRSRY*SKALLA
Trigger: AGCCAACAATGCCTTTGACCAGTATCGAGACCTGTA...CTTTGAAGAGAAAGCAGCAATGCTAAACCTCTGTTTCATGCTAACCAGACACGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674228.1
ENST00000674449.1
3UTR-3UTR CCA 90 bp AAAAAGGCAAAGGATGGAAGGCCTGCTGGGTGCCAATATGCAGAAACAAACTCCCTGAAACTACCGCTTTaGGAAGAAACTAAAACTGCA +
Preference number: 2 (lower is better)
Translates to: KKAKDGRPAGCQYAETNSLKLPL*EETKTA
Trigger: TGCAGTTTTAGTTTCTTCCCAAAGCGGTAGTTTCAG...GGAGTTTGTTTCTGCATATTGGCACCCAGCAGGCCTTCCATCCTTTGCCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR-3UTR TCA 90 bp AAAAAGGCAAAGGATGGAAGGCCTGCTGGGTGCCAATATGCAGAAACAAACTCCATGTGTGGGTATTTTTaGAACAGCTTAACAACGGAT +
Preference number: 2 (lower is better)
Translates to: KKAKDGRPAGCQYAETNSMCGYF*NSLTTD
Trigger: ATCCGTTGTTAAGCTGTTTCAAAAATACCCACACAT...GGAGTTTGTTTCTGCATATTGGCACCCAGCAGGCCTTCCATCCTTTGCCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR-3UTR GCA 90 bp CCATTACCAACAAGCAAGACTATTTTCCTTTCCATTAGCGAAACCTGTTTAAAGCCAGATTTGTTGGTCTaGAGCCACAGCATCACCGTG +
Preference number: 2 (lower is better)
Translates to: PLPTSKTIFLSISETCLKPDLLV*SHSITV
Trigger: CACGGTGATGCTGTGGCTGCAGACCAACAAATCTGG...CTTTAAACAGGTTTCGCTAATGGAAAGGAAAATAGTCTTGCTTGTTGGTAATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674228.1
3UTR-3UTR TCA 90 bp TTAACCAGCTTGAGTACTTATCTGAGCCTCAGCTTCATCAGCTGCCAAATGGAAGTTATATCACCTTTCTaGTCTGTCAGCTCGTTTGTA +
Preference number: 2 (lower is better)
Translates to: LTSLSTYLSLSFISCQMEVISPF*SVSSFV
Trigger: TACAAACGAGCTGACAGATCAGAAAGGTGATATAAC...TTCCATTTGGCAGCTGATGAAGCTGAGGCTCAGATAAGTACTCAAGCTGGTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR-3UTR TCA 90 bp GCGTGTCTGGTTAGCATGAAACAGAGGTTTAGCATTGCTGCTTTCTCTTCAAAGAAAACAGTTAACCTATaGAGTTATCAACTCCCCGGT +
Preference number: 2 (lower is better)
Translates to: ACLVSMKQRFSIAAFSSKKTVNL*SYQLPG
Trigger: ACCGGGGAGTTGATAACTTCATAGGTTAACTGTTTT...CTTTGAAGAGAAAGCAGCAATGCTAAACCTCTGTTTCATGCTAACCAGACACGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR CCA 72 bp GCCCCAGGTGGCCTCCACACAGCCGGTGAAGGGAGCTaGTGCCTCTCAGGCCGTCCCGAGGCAGTGGAGGAA +
Preference number: 3 (lower is better)
Translates to: APGGLHTAGEGS*CLSGRPEAVEE
Trigger: TTCCTCCACTGCCTCGGGACGGCCTGAGAGGCACCAGCTCCCTTCACCGGCTGTGTGGAGGCCACCTGGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR GCA 72 bp GGTGAGGCGGTGGAGGCCTGGGGGCCACCATGCCAGTaGCTGGCTGATTTGCTGCATGGACCCGCTTCCTGG +
Preference number: 3 (lower is better)
Translates to: GEAVEAWGPPCQ*LADLLHGPASW
Trigger: CCAGGAAGCGGGTCCATGCAGCAAATCAGCCAGGCACTGGCATGGTGGCCCCCAGGCCTCCACCGCCTCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR CCA 72 bp GATGGTGCAGGACACTGGCCACTGGCAGCAGAGCCCTaGCAGAGGACGTCAGAGAGGCTGGGGCCCCCTGAG +
Preference number: 3 (lower is better)
Translates to: DGAGHWPLAAEP*QRTSERLGPPE
Trigger: CTCAGGGGGCCCCAGCCTCTCTGACGTCCTCTGCCAGGGCTCTGCTGCCAGTGGCCAGTGTCCTGCACCATC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR CCA 72 bp TATCGCCGCTGCAGAGGTCCACGCTGGCGGTGGTCGTaGTATTCAGGGGCTCGCCACCACCACCCGCAGGCT +
Preference number: 3 (lower is better)
Translates to: YRRCRGPRWRWS*YSGARHHHPQA
Trigger: AGCCTGCGGGTGGTGGTGGCGAGCCCCTGAATACCACGACCACCGCCAGCGTGGACCTCTGCAGCGGCGATA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR CCA 72 bp GAGTGGTATCGCCGCTGCAGAGGTCCACGCTGGCGGTaGTCGTGGTATTCAGGGGCTCGCCACCACCACCCG +
Preference number: 3 (lower is better)
Translates to: EWYRRCRGPRWR*SWYSGARHHHP
Trigger: CGGGTGGTGGTGGCGAGCCCCTGAATACCACGACCACCGCCAGCGTGGACCTCTGCAGCGGCGATACCACTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR CCA 72 bp AGGCGGTGGAGGCCTGGGGGCCACCATGCCAGTGCCTaGCTGATTTGCTGCATGGACCCGCTTCCTGGGGTG +
Preference number: 3 (lower is better)
Translates to: RRWRPGGHHASA*LICCMDPLPGV
Trigger: CACCCCAGGAAGCGGGTCCATGCAGCAAATCAGCCAGGCACTGGCATGGTGGCCCCCAGGCCTCCACCGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR CAA 90 bp GGCGGGTTGGTGAGTCCTGTTTTAGTGGGGAGGGTCTCGCGGCTCTCAGGCAGGGGCCCTGCCTGCACGTaGCGCTCTGCTGTCTCGGAG +
Preference number: 3 (lower is better)
Translates to: GGLVSPVLVGRVSRLSGRGPACT*RSAVSE
Trigger: CTCCGAGACAGCAGAGCGCAACGTGCAGGCAGGGCC...CCTGCCTGAGAGCCGCGAGACCCTCCCCACTAAAACAGGACTCACCAACCCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR GCA 72 bp CCGTGGCGGCTCTGGGGTGTGGAGTGGTATCGCCGCTaGAGAGGTCCACGCTGGCGGTGGTCGTGGTATTCA +
Preference number: 3 (lower is better)
Translates to: PWRLWGVEWYRR*RGPRWRWSWYS
Trigger: TGAATACCACGACCACCGCCAGCGTGGACCTCTGCAGCGGCGATACCACTCCACACCCCAGAGCCGCCACGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR GCA 72 bp AGGCCTGGGGGCCACCATGCCAGTGCCTGGCTGATTTaGTGCATGGACCCGCTTCCTGGGGTGAGGCTCTGG +
Preference number: 3 (lower is better)
Translates to: RPGGHHASAWLI*CMDPLPGVRLW
Trigger: CCAGAGCCTCACCCCAGGAAGCGGGTCCATGCAGCAAATCAGCCAGGCACTGGCATGGTGGCCCCCAGGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR GCA 72 bp CCAGGTGGCCTCCACACAGCCGGTGAAGGGAGCTGGTaGCTCTCAGGCCGTCCCGAGGCAGTGGAGGAAAGA +
Preference number: 3 (lower is better)
Translates to: PGGLHTAGEGSW*LSGRPEAVEER
Trigger: TCTTTCCTCCACTGCCTCGGGACGGCCTGAGAGGCACCAGCTCCCTTCACCGGCTGTGTGGAGGCCACCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR CCA 72 bp TCAGAGGCCTGCCTCCTGCTCTGTCCGCCGTGGACCTaGAGGGTCCAGAGAGCGCCCGGCTTTTGTTTGGGC +
Preference number: 3 (lower is better)
Translates to: SEACLLLCPPWT*RVQRAPGFCLG
Trigger: GCCCAAACAAAAGCCGGGCGCTCTCTGGACCCTCCAGGTCCACGGCGGACAGAGCAGGAGGCAGGCCTCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR CCA 72 bp GGTGTGGAGTGGTATCGCCGCTGCAGAGGTCCACGCTaGCGGTGGTCGTGGTATTCAGGGGCTCGCCACCAC +
Preference number: 3 (lower is better)
Translates to: GVEWYRRCRGPR*RWSWYSGARHH
Trigger: GTGGTGGCGAGCCCCTGAATACCACGACCACCGCCAGCGTGGACCTCTGCAGCGGCGATACCACTCCACACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR CCA 72 bp CCCACCTCCACCTTGGAAAGTCTGCTGCACCCCTTCTaGGGTGGGCCTTCAGTGCGCAGCCCCTGGACCTGG +
Preference number: 3 (lower is better)
Translates to: PTSTLESLLHPF*GGPSVRSPWTW
Trigger: CCAGGTCCAGGGGCTGCGCACTGAAGGCCCACCCCAGAAGGGGTGCAGCAGACTTTCCAAGGTGGAGGTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR CAA 90 bp GAGGTCCACGCTGGCGGTGGTCGTGGTATTCAGGGGCTCGCCACCACCACCCGCGTGCCAGAGCCAGATTaGTTGGTCTGCAGCCACAGC +
Preference number: 3 (lower is better)
Translates to: EVHAGGGRGIQGLATTTRVPEPD*LVCSHS
Trigger: GCTGTGGCTGCAGACCAACAAATCTGGCTCTGGCAC...GCGGGTGGTGGTGGCGAGCCCCTGAATACCACGACCACCGCCAGCGTGGACCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674228.1
3UTR TCA 72 bp GGCTGGCTGCAGCACAGTGTCCCCACGGGAGGATTCTaGGCTCCAACGTGGCAGGAGCCTGGCAGCTCTCAG +
Preference number: 3 (lower is better)
Translates to: GWLQHSVPTGGF*APTWQEPGSSQ
Trigger: CTGAGAGCTGCCAGGCTCCTGCCACGTTGGAGCTCAGAATCCTCCCGTGGGGACACTGTGCTGCAGCCAGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR GCA 72 bp CTGTGGGAGGGAGGAGTCATCTTGAGCAGACCTGGCTaGCAGGGTTTCTACGCCAGGACGCCCCCAGTGGGC +
Preference number: 3 (lower is better)
Translates to: LWEGGVILSRPG*QGFYARTPPVG
Trigger: GCCCACTGGGGGCGTCCTGGCGTAGAAACCCTGGCAGCCAGGTCTGCTCAAGATGACTCCTCCCTCCCACAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR GCA 72 bp TCTCCTGCGGGGCCACTCTCCTCCTTCCTCCCGAGGTaGTGGGAACAGAACGGCACCAGCCTGGATCCCACT +
Preference number: 3 (lower is better)
Translates to: SPAGPLSSFLPR*WEQNGTSLDPT
Trigger: AGTGGGATCCAGGCTGGTGCCGTTCTGTTCCCAGCACCTCGGGAGGAAGGAGGAGAGTGGCCCCGCAGGAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR CCA 72 bp CTCATGTCAGAGGCCTGCCTCCTGCTCTGTCCGCCGTaGACCTGGAGGGTCCAGAGAGCGCCCGGCTTTTGT +
Preference number: 3 (lower is better)
Translates to: LMSEACLLLCPP*TWRVQRAPGFC
Trigger: ACAAAAGCCGGGCGCTCTCTGGACCCTCCAGGTCCACGGCGGACAGAGCAGGAGGCAGGCCTCTGACATGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR CCA 72 bp CTGGCTGCCAGGGTTTCTACGCCAGGACGCCCCCAGTaGGCGGCCAGGGAACTGCACCATCACGGTGTATCT +
Preference number: 3 (lower is better)
Translates to: LAARVSTPGRPQ*AARELHHHGVS
Trigger: AGATACACCGTGATGGTGCAGTTCCCTGGCCGCCCACTGGGGGCGTCCTGGCGTAGAAACCCTGGCAGCCAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR CCA 72 bp CCTGCGGGGCCACTCTCCTCCTTCCTCCCGAGGTGCTaGGAACAGAACGGCACCAGCCTGGATCCCACTACA +
Preference number: 3 (lower is better)
Translates to: PAGPLSSFLPRC*EQNGTSLDPTT
Trigger: TGTAGTGGGATCCAGGCTGGTGCCGTTCTGTTCCCAGCACCTCGGGAGGAAGGAGGAGAGTGGCCCCGCAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR-3UTR CAA 90 bp GGCGGCCAAAGGCATCAGCCCCCACGGCCCCCAGGCTCCAAATCTCAGCCGATTGGAAGGTTATGCTGGTaGTGGCCGAGTCGGCACTGG +
Preference number: 3 (lower is better)
Translates to: GGQRHQPPRPPGSKSQPIGRLCW*WPSRHW
Trigger: CCAGTGCCGACTCGGCCACAACCAGCATAACCTTCC...AATCGGCTGAGATTTGGAGCCTGGGGGCCGTGGGGGCTGATGCCTTTGGCCGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR CAA 90 bp ATGGACAGGTGCTCATCTCTGCCCCTGGCCACCGGTGACCCGGCCATAGTCCCTACCAGGCGCCCGATGTaGGCTATGTGTGGGGAGCAG +
Preference number: 3 (lower is better)
Translates to: MDRCSSLPLATGDPAIVPTRRPM*AMCGEQ
Trigger: CTGCTCCCCACACATAGCCAACATCGGGCGCCTGGT...AGGGACTATGGCCGGGTCACCGGTGGCCAGGGGCAGAGATGAGCACCTGTCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674228.1
3UTR GCA 72 bp GTTACATGGGGCCGAGGCTACACGGGAATGTGGCTGTaGACCGACCGGGAGCACACGTGGGGGTTAGTGGTG +
Preference number: 3 (lower is better)
Translates to: VTWGRGYTGMWL*TDREHTWGLVV
Trigger: CACCACTAACCCCCACGTGTGCTCCCGGTCGGTGCACAGCCACATTCCCGTGTAGCCTCGGCCCCATGTAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR CCA 72 bp GGCTGGGCGGGAAAGTGTGTTTGGTGTATCGGGCAGTaGCTGCCAGTGGCAGGCCTAACGCCAGGGACCACT +
Preference number: 3 (lower is better)
Translates to: GWAGKCVWCIGQ*LPVAGLTPGTT
Trigger: AGTGGTCCCTGGCGTTAGGCCTGCCACTGGCAGCCACTGCCCGATACACCAAACACACTTTCCCGCCCAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR CCA 72 bp TGCCGTGTTACATGGGGCCGAGGCTACACGGGAATGTaGCTGTGCACCGACCGGGAGCACACGTGGGGGTTA +
Preference number: 3 (lower is better)
Translates to: CRVTWGRGYTGM*LCTDREHTWGL
Trigger: TAACCCCCACGTGTGCTCCCGGTCGGTGCACAGCCACATTCCCGTGTAGCCTCGGCCCCATGTAACACGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR CCA 72 bp GAACAGCTGCAGCTCGTTAGGGGCGGAAGGTTATGCTaGTTGTGGCCGAGTCGGCACTGGGCGTCCAGGCAG +
Preference number: 3 (lower is better)
Translates to: EQLQLVRGGRLC*LWPSRHWASRQ
Trigger: CTGCCTGGACGCCCAGTGCCGACTCGGCCACAACCAGCATAACCTTCCGCCCCTAACGAGCTGCAGCTGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR CCA 72 bp CGGCGGGCAAAGCAGCAGCGCACAGGACCTCTAGCCTaGGTGGTCACTGGCTCTTCTGGGAAGGAAGAGCCA +
Preference number: 3 (lower is better)
Translates to: RRAKQQRTGPLA*VVTGSSGKEEP
Trigger: TGGCTCTTCCTTCCCAGAAGAGCCAGTGACCACCCAGGCTAGAGGTCCTGTGCGCTGCTGCTTTGCCCGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR CCA 72 bp CTTGCCAGGCCCTGTGGGGGTGGCATATGGCTTACATaGACAGGTGCTCATCTCTGCCCCTGGCCACCGGTG +
Preference number: 3 (lower is better)
Translates to: LARPCGGGIWLT*TGAHLCPWPPV
Trigger: CACCGGTGGCCAGGGGCAGAGATGAGCACCTGTCCATGTAAGCCATATGCCACCCCCACAGGGCCTGGCAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR CAA 90 bp TCATGTCAGAGGCCTGCCTCCTGCTCTGTCCGCCGTGGACCTGGAGGGTCCAGAGAGAGCGCCCGGCTTTaGTTTGGGCTGACACTGCAG +
Preference number: 3 (lower is better)
Translates to: SCQRPASCSVRRGPGGSRESARL*FGLTLQ
Trigger: CTGCAGTGTCAGCCCAAACAAAAGCCGGGCGCTCTC...TCTGGACCCTCCAGGTCCACGGCGGACAGAGCAGGAGGCAGGCCTCTGACATGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR CAA 90 bp GCTGATTTGCTGCATGGACCCGCTTCCTGGGGTGAGGCTCTGGGTCACTGGGCTTGGGGACTGTGCAGGTaGGCTGGGCGGGAAAGTGTG +
Preference number: 3 (lower is better)
Translates to: ADLLHGPASWGEALGHWAWGLCR*AGRESV
Trigger: CACACTTTCCCGCCCAGCCAACCTGCACAGTCCCCA...AGCCCAGTGACCCAGAGCCTCACCCCAGGAAGCGGGTCCATGCAGCAAATCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR CAA 90 bp CTGATTTGCTGCATGGACCCGCTTCCTGGGGTGAGGCTCTGGGTCACTGGGCTGGCGCTGGGTCAGCACTaGAGAGAGCTCCCTCTGCAA +
Preference number: 3 (lower is better)
Translates to: LICCMDPLPGVRLWVTGLALGQH*RELPLQ
Trigger: TTGCAGAGGGAGCTCTCTCAAGTGCTGACCCAGCGC...CAGCCCAGTGACCCAGAGCCTCACCCCAGGAAGCGGGTCCATGCAGCAAATCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR CAA 90 bp GCTGATTTGCTGCATGGACCCGCTTCCTGGGGTGAGGCTCTGGGTCACTGGGCTCAAGCCCGCCAGGTCTaGGCTGGATCACACGAAGGA +
Preference number: 3 (lower is better)
Translates to: ADLLHGPASWGEALGHWAQARQV*AGSHEG
Trigger: TCCTTCGTGTGATCCAGCCAAGACCTGGCGGGCTTG...AGCCCAGTGACCCAGAGCCTCACCCCAGGAAGCGGGTCCATGCAGCAAATCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR TCA 72 bp GAACGACGAGAAGCCAGGAACGCAGGGGGCCACAGCTaGGGAGGAAATTCAGGGAGACCCACGAGGCGGAAG +
Preference number: 3 (lower is better)
Translates to: ERREARNAGGHS*GGNSGRPTRRK
Trigger: CTTCCGCCTCGTGGGTCTCCCTGAATTTCCTCCTCAGCTGTGGCCCCCTGCGTTCCTGGCTTCTCGTCGTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR TCA 72 bp TCCAAGCCAGCTAGCCCTGGACAGGCAATGTGCCGCTaGGCAGCGGGGAGGCTTATGTGGCTTCTGGGATCC +
Preference number: 3 (lower is better)
Translates to: SKPASPGQAMCR*AAGRLMWLLGS
Trigger: GGATCCCAGAAGCCACATAAGCCTCCCCGCTGCTCAGCGGCACATTGCCTGTCCAGGGCTAGCTGGCTTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR GCA 72 bp AAGGAACAGCTGCAGCTCGTTAGGGGCGGAAGGTTATaGTGGTTGTGGCCGAGTCGGCACTGGGCGTCCAGG +
Preference number: 3 (lower is better)
Translates to: KEQLQLVRGGRL*WLWPSRHWASR
Trigger: CCTGGACGCCCAGTGCCGACTCGGCCACAACCAGCATAACCTTCCGCCCCTAACGAGCTGCAGCTGTTCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR CCA 72 bp GTGGCTGCCAGTGGCAGGCCTAACGCCAGGGACCACTaGGCTCTAACCCTGTCACAGGTCACGAAGACCAAG +
Preference number: 3 (lower is better)
Translates to: VAASGRPNARDH*ALTLSQVTKTK
Trigger: CTTGGTCTTCGTGACCTGTGACAGGGTTAGAGCCCAGTGGTCCCTGGCGTTAGGCCTGCCACTGGCAGCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR CCA 72 bp GGGACTGTGCAGGTTGGCTGGGCGGGAAAGTGTGTTTaGTGTATCGGGCAGTGGCTGCCAGTGGCAGGCCTA +
Preference number: 3 (lower is better)
Translates to: GTVQVGWAGKCV*CIGQWLPVAGL
Trigger: TAGGCCTGCCACTGGCAGCCACTGCCCGATACACCAAACACACTTTCCCGCCCAGCCAACCTGCACAGTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR CCA 72 bp CTTCCCAGCCACTGCCTGGGGACTGTGCAGGTTGGCTaGGCGGGAAAGTGTGTTTGGTGTATCGGGCAGTGG +
Preference number: 3 (lower is better)
Translates to: LPSHCLGTVQVG*AGKCVWCIGQW
Trigger: CCACTGCCCGATACACCAAACACACTTTCCCGCCCAGCCAACCTGCACAGTCCCCAGGCAGTGGCTGGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR CCA 72 bp CCCACTTCCCAGCCACTGCCTGGGGACTGTGCAGGTTaGCTGGGCGGGAAAGTGTGTTTGGTGTATCGGGCA +
Preference number: 3 (lower is better)
Translates to: PTSQPLPGDCAG*LGGKVCLVYRA
Trigger: TGCCCGATACACCAAACACACTTTCCCGCCCAGCCAACCTGCACAGTCCCCAGGCAGTGGCTGGGAAGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR CCA 72 bp GACTCTGTGGGAGGGAGGAGTCATCTTGAGCAGACCTaGCTGCCAGGGTTTCTACGCCAGGACGCCCCCAGT +
Preference number: 3 (lower is better)
Translates to: DSVGGRSHLEQT*LPGFLRQDAPS
Trigger: ACTGGGGGCGTCCTGGCGTAGAAACCCTGGCAGCCAGGTCTGCTCAAGATGACTCCTCCCTCCCACAGAGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR CCA 72 bp CCTCTGCACCTTGCCAGGCCCTGTGGGGGTGGCATATaGCTTACATGGACAGGTGCTCATCTCTGCCCCTGG +
Preference number: 3 (lower is better)
Translates to: PLHLARPCGGGI*LTWTGAHLCPW
Trigger: CCAGGGGCAGAGATGAGCACCTGTCCATGTAAGCCATATGCCACCCCCACAGGGCCTGGCAAGGTGCAGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR CCA 72 bp GCAGGGGCCTCATCTACCACGTACGAGGTGCATCCCTaGTACTCAGCAAGCACCCGGCTCATGGGAGGCACT +
Preference number: 3 (lower is better)
Translates to: AGASSTTYEVHP*YSASTRLMGGT
Trigger: AGTGCCTCCCATGAGCCGGGTGCTTGCTGAGTACCAGGGATGCACCTCGTACGTGGTAGATGAGGCCCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR CCA 72 bp TATCCCGGATGGCAGCTCCAACTGCTGTCCCTTTGGTaGTCTGCGGTCCCTGTCACCCAGGAAGAGCCTGGC +
Preference number: 3 (lower is better)
Translates to: YPGWQLQLLSLW*SAVPVTQEEPG
Trigger: GCCAGGCTCTTCCTGGGTGACAGGGACCGCAGACCACCAAAGGGACAGCAGTTGGAGCTGCCATCCGGGATA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR TCA 72 bp CCCCCAACCACCAGGGGCGCAGGCCAAGCTCTAGCTTaGAGTGTGTGGTCTGAAAGTGGCAGCTGCACCTGT +
Preference number: 3 (lower is better)
Translates to: PPTTRGAGQALA*SVWSESGSCTC
Trigger: ACAGGTGCAGCTGCCACTTTCAGACCACACACTTCAAGCTAGAGCTTGGCCTGCGCCCCTGGTGGTTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR GCA 72 bp AGGCTCCAAATCTCAGCCGATTCCCCAGGGGCTTCTTaGCAAGCTCACAGCGGGAGGTCAACATGGCCAGCG +
Preference number: 3 (lower is better)
Translates to: RLQISADSPGAS*QAHSGRSTWPA
Trigger: CGCTGGCCATGTTGACCTCCCGCTGTGAGCTTGGCAAGAAGCCCCTGGGGAATCGGCTGAGATTTGGAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR CCA 72 bp GGGAAGGTCACGGCCAAGCAACCTCGAATCAGCGCTTaGAGACAGTGCTCGACTCTGTGGGAGGGAGGAGTC +
Preference number: 3 (lower is better)
Translates to: GKVTAKQPRISA*RQCSTLWEGGV
Trigger: GACTCCTCCCTCCCACAGAGTCGAGCACTGTCTCCAAGCGCTGATTCGAGGTTGCTTGGCCGTGACCTTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR CCA 72 bp TGGTATCCCGGATGGCAGCTCCAACTGCTGTCCCTTTaGTGGTCTGCGGTCCCTGTCACCCAGGAAGAGCCT +
Preference number: 3 (lower is better)
Translates to: WYPGWQLQLLSL*WSAVPVTQEEP
Trigger: AGGCTCTTCCTGGGTGACAGGGACCGCAGACCACCAAAGGGACAGCAGTTGGAGCTGCCATCCGGGATACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR CCA 72 bp GCAGCTCAGGGTGACCAAGCCAGCAGACGGGAGCATTaGGTGGAGGTCTCCTCTCAGAATGACCCTTGCCTG +
Preference number: 3 (lower is better)
Translates to: AAQGDQASRREH*VEVSSQNDPCL
Trigger: CAGGCAAGGGTCATTCTGAGAGGAGACCTCCACCCAATGCTCCCGTCTGCTGGCTTGGTCACCCTGAGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR-3UTR CAA 90 bp GGAAGGAAGAGCCAAGCCCGCCAGGTCTTGGCTGGATCACACGAAGGAGAAAGTTGGGGACTGTGCAGGTaGGCTGGGCGGGAAAGTGTG +
Preference number: 3 (lower is better)
Translates to: GRKSQARQVLAGSHEGESWGLCR*AGRESV
Trigger: CACACTTTCCCGCCCAGCCAACCTGCACAGTCCCCA...ACTTTCTCCTTCGTGTGATCCAGCCAAGACCTGGCGGGCTTGGCTCTTCCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR CAA 90 bp CTTGCCAGGCCCTGTGGGGGTGGCATATGGCTTACATGGACAGGTGCTCATCTCGGAAGGTTATGCTGGTaGTGGCCGAGTCGGCACTGG +
Preference number: 3 (lower is better)
Translates to: LARPCGGGIWLTWTGAHLGRLCW*WPSRHW
Trigger: CCAGTGCCGACTCGGCCACAACCAGCATAACCTTCC...GAGATGAGCACCTGTCCATGTAAGCCATATGCCACCCCCACAGGGCCTGGCAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR TCA 72 bp ACGATGGGAATCCACTCTGGCCTCTTGTTCAGCCTCTaGGGTAGACAAGGCCCCAGGTGGCCTCCACACAGC +
Preference number: 3 (lower is better)
Translates to: TMGIHSGLLFSL*GRQGPRWPPHS
Trigger: GCTGTGTGGAGGCCACCTGGGGCCTTGTCTACCTCAGAGGCTGAACAAGAGGCCAGAGTGGATTCCCATCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR GCA 72 bp ATTCATGCCTCTGGTATCCCGGATGGCAGCTCCAACTaGTGTCCCTTTGGTGGTCTGCGGTCCCTGTCACCC +
Preference number: 3 (lower is better)
Translates to: IHASGIPDGSSN*CPFGGLRSLSP
Trigger: GGGTGACAGGGACCGCAGACCACCAAAGGGACAGCAGTTGGAGCTGCCATCCGGGATACCAGAGGCATGAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR GCA 72 bp TTAGGCCATAAAACAAGCGGCTCCCTGGAGGCTGGCTaGAGCACAGTGTCCCCACGGGAGGATTCTGAGCTC +
Preference number: 3 (lower is better)
Translates to: LGHKTSGSLEAG*STVSPREDSEL
Trigger: GAGCTCAGAATCCTCCCGTGGGGACACTGTGCTGCAGCCAGCCTCCAGGGAGCCGCTTGTTTTATGGCCTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR CCA 72 bp CCTCGAATCAGCGCTTGGAGACAGTGCTCGACTCTGTaGGAGGGAGGAGTCATCTTGAGCAGACCTGGCTGC +
Preference number: 3 (lower is better)
Translates to: PRISAWRQCSTL*EGGVILSRPGC
Trigger: GCAGCCAGGTCTGCTCAAGATGACTCCTCCCTCCCACAGAGTCGAGCACTGTCTCCAAGCGCTGATTCGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR CCA 72 bp CAACAAACATGCCCACAGACAGCAAGTCCAGTCTTCTaGCATGAGCCAGCAGGGTACGGCGGGGGCAGGAAC +
Preference number: 3 (lower is better)
Translates to: QQTCPQTASPVF*HEPAGYGGGRN
Trigger: GTTCCTGCCCCCGCCGTACCCTGCTGGCTCATGCCAGAAGACTGGACTTGCTGTCTGTGGGCATGTTTGTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR-3UTR CAA 90 bp GAGTGGGTAGAGGGCTGCTCAAGAAGAGTGCTACGGAGAGTGCACTCAGCCGGAGGCGGGAAAGTGTGTTaGGTGTATCGGGCAGTGGCT +
Preference number: 3 (lower is better)
Translates to: EWVEGCSRRVLRRVHSAGGGKVC*VYRAVA
Trigger: AGCCACTGCCCGATACACCAAACACACTTTCCCGCC...TCCGGCTGAGTGCACTCTCCGTAGCACTCTTCTTGAGCAGCCCTCTACCCACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR CAA 90 bp AGGCCCTGTGGGGGTGGCATATGGCTTACATGGACAGGTGCTCATCTCTGCCCCACCTCGAATCAGCGCTaGGAGACAGTGCTCGACTCT +
Preference number: 3 (lower is better)
Translates to: RPCGGGIWLTWTGAHLCPTSNQR*ETVLDS
Trigger: AGAGTCGAGCACTGTCTCCAAGCGCTGATTCGAGGT...GGGGCAGAGATGAGCACCTGTCCATGTAAGCCATATGCCACCCCCACAGGGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR CAA 90 bp TTAACTTGGCCCAGAAAACCCCTCAGCCCGGATTGCAAAGGGCGGCACAGGACACAAGCCCGCCAGGTCTaGGCTGGATCACACGAAGGA +
Preference number: 3 (lower is better)
Translates to: LTWPRKPLSPDCKGRHRTQARQV*AGSHEG
Trigger: TCCTTCGTGTGATCCAGCCAAGACCTGGCGGGCTTG...TGTCCTGTGCCGCCCTTTGCAATCCGGGCTGAGGGGTTTTCTGGGCCAAGTTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR CAA 90 bp TACCAGGCGCCCGATGTTGGCTATGTGTGGGGAGCAGTCACTCACAGTTTCATCACCAGGCGCCCGATGTaGGCTATGTGTGGGGAGCAG +
Preference number: 3 (lower is better)
Translates to: YQAPDVGYVWGAVTHSFITRRPM*AMCGEQ
Trigger: CTGCTCCCCACACATAGCCAACATCGGGCGCCTGGT...GATGAAACTGTGAGTGACTGCTCCCCACACATAGCCAACATCGGGCGCCTGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674228.1
ENST00000674449.1
3UTR-3UTR CAA 90 bp GTAGAGGGCTGCTCAAGAAGAGTGCTACGGAGAGTGCACTCAGCCGGACTCTCACAGGGTCTCGGCGGGTaGGTGAGTCCTGTTTTAGTG +
Preference number: 3 (lower is better)
Translates to: VEGCSRRVLRRVHSAGLSQGLGG*VSPVLV
Trigger: CACTAAAACAGGACTCACCAACCCGCCGAGACCCTG...TGAGAGTCCGGCTGAGTGCACTCTCCGTAGCACTCTTCTTGAGCAGCCCTCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR CAA 90 bp CCCTGTGGGGGTGGCATATGGCTTACATGGACAGGTGCTCATCTCTGCCCCTGGTTTAAGGGACAATGCTaGGGAAGGTCACGGCCAAGC +
Preference number: 3 (lower is better)
Translates to: PCGGGIWLTWTGAHLCPWFKGQC*GRSRPS
Trigger: GCTTGGCCGTGACCTTCCCAAGCATTGTCCCTTAAA...CCAGGGGCAGAGATGAGCACCTGTCCATGTAAGCCATATGCCACCCCCACAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR CAA 90 bp TCTCACAGGCCGGGGACACCAGCCACTTTCCTGGCCCCTCAGGCAGCAGCTCAGTCACTGGTCCACTGTTaGTTTTTCCACAATGGAGTG +
Preference number: 3 (lower is better)
Translates to: SHRPGTPATFLAPQAAAQSLVHC*FFHNGV
Trigger: CACTCCATTGTGGAAAAACAAACAGTGGACCAGTGA...CTGAGCTGCTGCCTGAGGGGCCAGGAAAGTGGCTGGTGTCCCCGGCCTGTGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR-3UTR CAA 90 bp GGTAGTCGTCTTGGGTCCCAGGCCCAGTGCAGCTTCATCACCTGGGGGACAAAAACCTGGCATGATAAATaGGGCTGCCTTGGCCTGGCT +
Preference number: 3 (lower is better)
Translates to: GSRLGSQAQCSFITWGTKTWHDK*GCLGLA
Trigger: AGCCAGGCCAAGGCAGCCCAATTTATCATGCCAGGT...TTTTGTCCCCCAGGTGATGAAGCTGCACTGGGCCTGGGACCCAAGACGACTACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR TCA 72 bp ATTGTTGGCTTCCACCTCCAGCTTTCTCAGCCGAGCTaGCGGCATGGCCCCATCCTCCAAGGGAGGGTCATA +
Preference number: 3 (lower is better)
Translates to: IVGFHLQLSQPS*RHGPILQGRVI
Trigger: TATGACCCTCCCTTGGAGGATGGGGCCATGCCGTCAGCTCGGCTGAGAAAGCTGGAGGTGGAAGCCAACAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR GCA 72 bp CTCCACCCAGAGTGGAAAGCACACACACGTGATAGGTaGCGTGTTACATGGGGCCGAGGCTACACGGGAATG +
Preference number: 3 (lower is better)
Translates to: LHPEWKAHTRDR*RVTWGRGYTGM
Trigger: CATTCCCGTGTAGCCTCGGCCCCATGTAACACGGCACCTATCACGTGTGTGTGCTTTCCACTCTGGGTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR GCA 72 bp ACGGCCAAGCAACCTCGAATCAGCGCTTGGAGACAGTaGTCGACTCTGTGGGAGGGAGGAGTCATCTTGAGC +
Preference number: 3 (lower is better)
Translates to: TAKQPRISAWRQ*STLWEGGVILS
Trigger: GCTCAAGATGACTCCTCCCTCCCACAGAGTCGAGCACTGTCTCCAAGCGCTGATTCGAGGTTGCTTGGCCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR GCA 72 bp TGTTTATGGCCCACGCAGCAGGTGCTTTCAGGCCTCTaGTGTGAGGCACCATCCGCTGTTAACTTGGCCCAG +
Preference number: 3 (lower is better)
Translates to: CLWPTQQVLSGL*CEAPSAVNLAQ
Trigger: CTGGGCCAAGTTAACAGCGGATGGTGCCTCACAGCAGAGGCCTGAAAGCACCTGCTGCGTGGGCCATAAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR GCA 72 bp TGCCCAGCAGAAGAGCCTCATTCCTCATCCCACAAGTaGAAGGTGCAGCGTTATCCCACCCTTGGGAGTGGG +
Preference number: 3 (lower is better)
Translates to: CPAEEPHSSSHK*KVQRYPTLGSG
Trigger: CCCACTCCCAAGGGTGGGATAACGCTGCACCTTGCACTTGTGGGATGAGGAATGAGGCTCTTCTGCTGGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR GCA 72 bp CAAAGCCACGGGGAAAAGAGCTTGCATTCCAGGGCCTaGTGTGGTCACTTATGTGGCCACCAACAGCCTCGC +
Preference number: 3 (lower is better)
Translates to: QSHGEKSLHSRA*CGHLCGHQQPR
Trigger: GCGAGGCTGTTGGTGGCCACATAAGTGACCACAGCAGGCCCTGGAATGCAAGCTCTTTTCCCCGTGGCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR CCA 72 bp TGGAAAGCACACACACGTGATAGGTGCCGTGTTACATaGGGCCGAGGCTACACGGGAATGTGGCTGTGCACC +
Preference number: 3 (lower is better)
Translates to: WKAHTRDRCRVT*GRGYTGMWLCT
Trigger: GGTGCACAGCCACATTCCCGTGTAGCCTCGGCCCCATGTAACACGGCACCTATCACGTGTGTGTGCTTTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR CCA 72 bp CTTCCACCTCCAGCTTTCTCAGCCGAGCTGACGGCATaGCCCCATCCTCCAAGGGAGGGTCATACTTGTTAC +
Preference number: 3 (lower is better)
Translates to: LPPPAFSAELTA*PHPPREGHTCY
Trigger: GTAACAAGTATGACCCTCCCTTGGAGGATGGGGCCATGCCGTCAGCTCGGCTGAGAAAGCTGGAGGTGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR-3UTR CAA 90 bp ACACAGCTAGTAACTGGCAGAGCCAGGGTTCAAATCCCTCTGTCTGCTTCTAAAGGCCCTGCCTGCACGTaGCGCTCTGCTGTCTCGGAG +
Preference number: 3 (lower is better)
Translates to: TQLVTGRARVQIPLSASKGPACT*RSAVSE
Trigger: CTCCGAGACAGCAGAGCGCAACGTGCAGGCAGGGCC...TTTAGAAGCAGACAGAGGGATTTGAACCCTGGCTCTGCCAGTTACTAGCTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR CAA 90 bp GTTCAGGGCGACCGCATTCACGTATGTGTGGGGACGCTCATCAACAAAGCCAGAGGCGGGAAAGTGTGTTaGGTGTATCGGGCAGTGGCT +
Preference number: 3 (lower is better)
Translates to: VQGDRIHVCVGTLINKARGGKVC*VYRAVA
Trigger: AGCCACTGCCCGATACACCAAACACACTTTCCCGCC...TCTGGCTTTGTTGATGAGCGTCCCCACACATACGTGAATGCGGTCGCCCTGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR CAA 90 bp ATGGACAGGTGCTCATCTCTGCCCCTGGCCACCGGTGACCCGGCCATAGTCCCTCTCAAGTCATGGTTCTaGGCCATTACCAACAAGCAA +
Preference number: 3 (lower is better)
Translates to: MDRCSSLPLATGDPAIVPLKSWF*AITNKQ
Trigger: TTGCTTGTTGGTAATGGCCAAGAACCATGACTTGAG...AGGGACTATGGCCGGGTCACCGGTGGCCAGGGGCAGAGATGAGCACCTGTCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR TCA 72 bp GGAAGGGAAAGGCTTCACCAGAGGCAGCGTGAAGAGTaGGGCCTTAGCTATGACTCCCGGCTCCTGTGGTTT +
Preference number: 3 (lower is better)
Translates to: GRERLHQRQREE*GLSYDSRLLWF
Trigger: AAACCACAGGAGCCGGGAGTCATAGCTAAGGCCTCACTCTTCACGCTGCCTCTGGTGAAGCCTTTCCCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR TCA 72 bp GGGGTGACAGGGATAATTTCAAAGCATGGCTACCGCTaGGGCTGGCAGTGTGAATACCTGTGCCCAGCTGGC +
Preference number: 3 (lower is better)
Translates to: GVTGIISKHGYR*GWQCEYLCPAG
Trigger: GCCAGCTGGGCACAGGTATTCACACTGCCAGCCTCAGCGGTAGCCATGCTTTGAAATTATCCCTGTCACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR GCA 72 bp AGCACTCAGCCTTCTCATCTGTCAAATCACACTCCCTaGAGACATCATGCTGCCCCGATGGGGGTGGCGATG +
Preference number: 3 (lower is better)
Translates to: STQPSHLSNHTP*RHHAAPMGVAM
Trigger: CATCGCCACCCCCATCGGGGCAGCATGATGTCTGCAGGGAGTGTGATTTGACAGATGAGAAGGCTGAGTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR CCA 72 bp AGTGGGGAGGGTCTCGCGGCTCTCAGGCAGGGTACCTaGATCGGCTTAATTATCAGGCTGGATGTAGATCTG +
Preference number: 3 (lower is better)
Translates to: SGEGLAALRQGT*IGLIIRLDVDL
Trigger: CAGATCTACATCCAGCCTGATAATTAAGCCGATCCAGGTACCCTGCCTGAGAGCCGCGAGACCCTCCCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR CCA 72 bp CGGAAGGAGCAGGGGGCTTATTTAAGGGACAATGCTTaGGAAGGTCACGGCCAAGCAACCTCGAATCAGCGC +
Preference number: 3 (lower is better)
Translates to: RKEQGAYLRDNA*EGHGQATSNQR
Trigger: GCGCTGATTCGAGGTTGCTTGGCCGTGACCTTCCCAAGCATTGTCCCTTAAATAAGCCCCCTGCTCCTTCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR CCA 72 bp CAGCCAAGTGCCCCTGGGATCCCTGCTGTCAAATTCTaGATTTGTGGGGAAACGTTCAGGGCGACCGCATTC +
Preference number: 3 (lower is better)
Translates to: QPSAPGIPAVKF*ICGETFRATAF
Trigger: GAATGCGGTCGCCCTGAACGTTTCCCCACAAATCCAGAATTTGACAGCAGGGATCCCAGGGGCACTTGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR CCA 72 bp ACCAGTGTCTCTGCGTGTCTGAGCACACTGTGTTTATaGCCCACGCAGCAGGTGCTTTCAGGCCTCTGCTGT +
Preference number: 3 (lower is better)
Translates to: TSVSACLSTLCL*PTQQVLSGLCC
Trigger: ACAGCAGAGGCCTGAAAGCACCTGCTGCGTGGGCCATAAACACAGTGTGCTCAGACACGCAGAGACACTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR CCA 72 bp TGCCTCCGAGGTTCATGGTGCCAGAGCCAGATTTGTTaGTCTGCAGCCACAGCATCACCGTGGAGGTCAACT +
Preference number: 3 (lower is better)
Translates to: CLRGSWCQSQIC*SAATASPWRST
Trigger: AGTTGACCTCCACGGTGATGCTGTGGCTGCAGACCAACAAATCTGGCTCTGGCACCATGAACCTCGGAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674228.1
ENST00000674449.1
3UTR CCA 72 bp GAAGAGAAAGGGATGGCCTACTGCCTCTCCACCCCATaGAACAGCCTGGTCCCTAGAAAACCGAGTGTGACC +
Preference number: 3 (lower is better)
Translates to: EEKGMAYCLSTP*NSLVPRKPSVT
Trigger: GGTCACACTCGGTTTTCTAGGGACCAGGCTGTTCCATGGGGTGGAGAGGCAGTAGGCCATCCCTTTCTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR CCA 72 bp CGGGTGTCCACTCACTCGTTCACTAAGGCTCGAATGTaGACACGTCCCCCAAGCACTCAGCCTTCTCATCTG +
Preference number: 3 (lower is better)
Translates to: RVSTHSFTKARM*TRPPSTQPSHL
Trigger: CAGATGAGAAGGCTGAGTGCTTGGGGGACGTGTCCACATTCGAGCCTTAGTGAACGAGTGAGTGGACACCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR CCA 72 bp CTGGCTCCATGGGCTGCTTCACGGAGAGCAGGTTTTTaGAAACGTAAGCAGCGGGTGTCCACTCACTCGTTC +
Preference number: 3 (lower is better)
Translates to: LAPWAASRRAGF*KRKQRVSTHSF
Trigger: GAACGAGTGAGTGGACACCCGCTGCTTACGTTTCCAAAAACCTGCTCTCCGTGAAGCAGCCCATGGAGCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR-3UTR CAA 90 bp CCCGCCAGGTCTTGGCTGGATCACACGAAGGAGAAAGTTCCAGAGCTAGAATCACAGGGTCTCGGCGGGTaGGTGAGTCCTGTTTTAGTG +
Preference number: 3 (lower is better)
Translates to: PARSWLDHTKEKVPELESQGLGG*VSPVLV
Trigger: CACTAAAACAGGACTCACCAACCCGCCGAGACCCTG...TGATTCTAGCTCTGGAACTTTCTCCTTCGTGTGATCCAGCCAAGACCTGGCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR TCA 72 bp AGGATCCAGTACAAAGCCAGCGCACTGCCCCTTATATaGGCATCGCACGTAGCGAGGAGTTCAAAGCCAGGC +
Preference number: 3 (lower is better)
Translates to: RIQYKASALPLI*ASHVARSSKPG
Trigger: GCCTGGCTTTGAACTCCTCGCTACGTGCGATGCTCATATAAGGGGCAGTGCGCTGGCTTTGTACTGGATCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR GCA 72 bp ATCCCACCCTTGGGAGTGGGTAAGAACCAGTGTCTCTaGGTGTCTGAGCACACTGTGTTTATGGCCCACGCA +
Preference number: 3 (lower is better)
Translates to: IPPLGVGKNQCL*VSEHTVFMAHA
Trigger: TGCGTGGGCCATAAACACAGTGTGCTCAGACACGCAGAGACACTGGTTCTTACCCACTCCCAAGGGTGGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR GCA 72 bp GGTTCCTCTATAAAAGCTTCTCCCTTGCCCAGGCCCTaGCCAGCAGAAGAGCCTCATTCCTCATCCCACAAG +
Preference number: 3 (lower is better)
Translates to: GSSIKASPLPRP*PAEEPHSSSHK
Trigger: CTTGTGGGATGAGGAATGAGGCTCTTCTGCTGGGCAGGGCCTGGGCAAGGGAGAAGCTTTTATAGAGGAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR GCA 72 bp TTCTGGGCTTCCAAACACAATGGAACAAAGCCCCTCTaGTTCAGAACAGCTACCCTGGGTTGCTGGCTGGGG +
Preference number: 3 (lower is better)
Translates to: FWASKHNGTKPL*FRTATLGCWLG
Trigger: CCCCAGCCAGCAACCCAGGGTAGCTGTTCTGAAGCAGAGGGGCTTTGTTCCATTGTGTTTGGAAGCCCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR GCA 72 bp ACAGCATCACCGTGGAGGTCAACTTGTAATGGGCGGTaGGACCGCTGGATTTCTCCTGCACTTCTACCACGT +
Preference number: 3 (lower is better)
Translates to: TASPWRSTCNGR*DRWISPALLPR
Trigger: ACGTGGTAGAAGTGCAGGAGAAATCCAGCGGTCGCACCGCCCATTACAAGTTGACCTCCACGGTGATGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674228.1
ENST00000674449.1
3UTR GCA 72 bp AGCACACTCCGATGGCACTGGGTGAGTCAAAATTCATaGCTCTGGTATCCCGGATGGCAGCTCCAACTGCTG +
Preference number: 3 (lower is better)
Translates to: STLRWHWVSQNS*LWYPGWQLQLL
Trigger: CAGCAGTTGGAGCTGCCATCCGGGATACCAGAGGCATGAATTTTGACTCACCCAGTGCCATCGGAGTGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR CCA 72 bp ATCCCACAAGTGCAAGGTGCAGCGTTATCCCACCCTTaGGAGTGGGTAAGAACCAGTGTCTCTGCGTGTCTG +
Preference number: 3 (lower is better)
Translates to: IPQVQGAALSHP*EWVRTSVSACL
Trigger: CAGACACGCAGAGACACTGGTTCTTACCCACTCCCAAGGGTGGGATAACGCTGCACCTTGCACTTGTGGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR CCA 72 bp TGGGTGAGTCAAAATTCATGCCTCTGGTATCCCGGATaGCAGCTCCAACTGCTGTCCCTTTGGTGGTCTGCG +
Preference number: 3 (lower is better)
Translates to: WVSQNSCLWYPG*QLQLLSLWWSA
Trigger: CGCAGACCACCAAAGGGACAGCAGTTGGAGCTGCCATCCGGGATACCAGAGGCATGAATTTTGACTCACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR CCA 72 bp CTCCGATGGCACTGGGTGAGTCAAAATTCATGCCTCTaGTATCCCGGATGGCAGCTCCAACTGCTGTCCCTT +
Preference number: 3 (lower is better)
Translates to: LRWHWVSQNSCL*YPGWQLQLLSL
Trigger: AAGGGACAGCAGTTGGAGCTGCCATCCGGGATACCAGAGGCATGAATTTTGACTCACCCAGTGCCATCGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR-3UTR CAA 90 bp GGTCACGAAGACCAAGCCTCCCCCAGGTGGGCAGGGGATCAGAAGACAAGGGTCAACAGAGGTTTAGCATaGCTGCTTTCTCTTCAAAGC +
Preference number: 3 (lower is better)
Translates to: GHEDQASPRWAGDQKTRVNRGLA*LLSLQS
Trigger: GCTTTGAAGAGAAAGCAGCAATGCTAAACCTCTGTT...GACCCTTGTCTTCTGATCCCCTGCCCACCTGGGGGAGGCTTGGTCTTCGTGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR CAA 90 bp GGAAGAGCCCTCAAAATACTCAGCAGGTGCCATAAGACAAGACCTGGAAGCAAGGCGCTGGGTCAGCACTaGAGAGAGCTCCCTCTGCAA +
Preference number: 3 (lower is better)
Translates to: GRALKILSRCHKTRPGSKALGQH*RELPLQ
Trigger: TTGCAGAGGGAGCTCTCTCAAGTGCTGACCCAGCGC...CTTGCTTCCAGGTCTTGTCTTATGGCACCTGCTGAGTATTTTGAGGGCTCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR CAA 90 bp AAGGGGCACCAGTCTCAGGGCCTTAGACAGGTGAGTTTGCCCCTGCCTCAGAGATCCTGGCTCTACCCCTaGCTGTGGACAAATACTTTA +
Preference number: 3 (lower is better)
Translates to: KGHQSQGLRQVSLPLPQRSWLYP*LWTNTL
Trigger: TAAAGTATTTGTCCACAGCAAGGGGTAGAGCCAGGA...TCTCTGAGGCAGGGGCAAACTCACCTGTCTAAGGCCCTGAGACTGGTGCCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR TCA 72 bp AGAGAGAGCTCTTCAGCACACTCCGATGGCACTGGGTaGGTCAAAATTCATGCCTCTGGTATCCCGGATGGC +
Preference number: 3 (lower is better)
Translates to: RESSSAHSDGTG*VKIHASGIPDG
Trigger: GCCATCCGGGATACCAGAGGCATGAATTTTGACTCACCCAGTGCCATCGGAGTGTGCTGAAGAGCTCTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR GCA 72 bp AAGGCGGAAGGAGCAGGGGGCTTATTTAAGGGACAATaGTTGGGAAGGTCACGGCCAAGCAACCTCGAATCA +
Preference number: 3 (lower is better)
Translates to: KAEGAGGLFKGQ*LGRSRPSNLES
Trigger: TGATTCGAGGTTGCTTGGCCGTGACCTTCCCAAGCATTGTCCCTTAAATAAGCCCCCTGCTCCTTCCGCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR GCA 72 bp CAGAAGAGCCTCATTCCTCATCCCACAAGTGCAAGGTaGAGCGTTATCCCACCCTTGGGAGTGGGTAAGAAC +
Preference number: 3 (lower is better)
Translates to: QKSLIPHPTSAR*SVIPPLGVGKN
Trigger: GTTCTTACCCACTCCCAAGGGTGGGATAACGCTGCACCTTGCACTTGTGGGATGAGGAATGAGGCTCTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR CCA 72 bp TGCCCCTGGGATCCCTGCTGTCAAATTCTGGATTTGTaGGGAAACGTTCAGGGCGACCGCATTCACGTATGT +
Preference number: 3 (lower is better)
Translates to: CPWDPCCQILDL*GNVQGDRIHVC
Trigger: ACATACGTGAATGCGGTCGCCCTGAACGTTTCCCCACAAATCCAGAATTTGACAGCAGGGATCCCAGGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR CCA 72 bp AGGTCCCTATGTCACCCTAAGCCACAAGGTGGCTTCTaGGCTTCCAAACACAATGGAACAAAGCCCCTCTGC +
Preference number: 3 (lower is better)
Translates to: RSLCHPKPQGGF*ASKHNGTKPLC
Trigger: GCAGAGGGGCTTTGTTCCATTGTGTTTGGAAGCCCAGAAGCCACCTTGTGGCTTAGGGTGACATAGGGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR CCA 72 bp CATGTCCTCTACCAGGCGCCCGATGTTGGCTATGTGTaGGGAGCAGTCACTCACAGTTTCATCCTTCTCCAT +
Preference number: 3 (lower is better)
Translates to: HVLYQAPDVGYV*GAVTHSFILLH
Trigger: ATGGAGAAGGATGAAACTGTGAGTGACTGCTCCCCACACATAGCCAACATCGGGCGCCTGGTAGAGGACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674228.1
ENST00000674449.1
3UTR CCA 72 bp AATGAGAACACCGTTTCCCCAACCCACTCTGGACGATaGGAATCCACTCTGGCCTCTTGTTCAGCCTCTGAG +
Preference number: 3 (lower is better)
Translates to: NENTVSPTHSGR*ESTLASCSASE
Trigger: CTCAGAGGCTGAACAAGAGGCCAGAGTGGATTCCCATCGTCCAGAGTGGGTTGGGGAAACGGTGTTCTCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR-3UTR CAA 90 bp CCAGGAGAGAGAGCTCTTCAGCACACTCCGATGGCACTGGGTGAGTCAAAATTCGTGTGCACTTGCTGGTaGACAGCTGTGTGTGCACAT +
Preference number: 3 (lower is better)
Translates to: PGERALQHTPMALGESKFVCTCW*TAVCAH
Trigger: ATGTGCACACACAGCTGTCAACCAGCAAGTGCACAC...GAATTTTGACTCACCCAGTGCCATCGGAGTGTGCTGAAGAGCTCTCTCTCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR TCA 72 bp GTGGTGGGCGCCTGTTGTCTTAGCTACTTGCAAGGCTaGGGCAGAAGATCATTTGAGCCCAGGAGTTTAGGA +
Preference number: 3 (lower is better)
Translates to: VVGACCLSYLQG*GRRSFEPRSLG
Trigger: TCCTAAACTCCTGGGCTCAAATGATCTTCTGCCTCAGCCTTGCAAGTAGCTAAGACAACAGGCGCCCACCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR CCA 72 bp GGGGAAACGTTCAGGGCGACCGCATTCACGTATGTGTaGGGACGCTCATCAACAAAGCCAGAAACAATGAAG +
Preference number: 3 (lower is better)
Translates to: GETFRATAFTYV*GRSSTKPETMK
Trigger: CTTCATTGTTTCTGGCTTTGTTGATGAGCGTCCCCACACATACGTGAATGCGGTCGCCCTGAACGTTTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR CCA 72 bp TCAGACCTCAGTCAAGTGTCTCCTCAAGAGGCCTCATaGGCCACTCTACATAACAAGTCAGCTGCTCCCTGT +
Preference number: 3 (lower is better)
Translates to: SDLSQVSPQEAS*ATLHNKSAAPC
Trigger: ACAGGGAGCAGCTGACTTGTTATGTAGAGTGGCCCATGAGGCCTCTTGAGGAGACACTTGACTGAGGTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR-3UTR CAA 90 bp GCTGTGCGGTCAATGATGCAGCTGTTATGTGACCTGTCGGGGAGGGAAGGGACGAACAGAGGTTTAGCATaGCTGCTTTCTCTTCAAAGC +
Preference number: 3 (lower is better)
Translates to: AVRSMMQLLCDLSGREGTNRGLA*LLSLQS
Trigger: GCTTTGAAGAGAAAGCAGCAATGCTAAACCTCTGTT...CGTCCCTTCCCTCCCCGACAGGTCACATAACAGCTGCATCATTGACCGCACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264203.7
ENST00000375142.5
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
ENST00000674449.1
3UTR-3UTR CAA 90 bp GGGAGGAGTCATCTTGAGCAGACCTGGCTGCCAGGGTTTCTACGCCAGGACGCCTGCTTAAACTTTTGGTaGTCAGGGATAGCATCAATA +
Preference number: 3 (lower is better)
Translates to: GRSHLEQTWLPGFLRQDACLNFW*SGIASI
Trigger: TATTGATGCTATCCCTGACAACCAAAAGTTTAAGCA...GGCGTCCTGGCGTAGAAACCCTGGCAGCCAGGTCTGCTCAAGATGACTCCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR CAA 90 bp CCAGGAGAGAGAGCTCTTCAGCACACTCCGATGGCACTGGGTGAGTCAAAATTCCAATTAAGTGACATGTaGGTGCTGTGGTGCTGGGAG +
Preference number: 3 (lower is better)
Translates to: PGERALQHTPMALGESKFQLSDM*VLWCWE
Trigger: CTCCCAGCACCACAGCACCAACATGTCACTTAATTG...GAATTTTGACTCACCCAGTGCCATCGGAGTGTGCTGAAGAGCTCTCTCTCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR-3UTR CAA 90 bp TCAACTTGTAATGGGCGGTGCGACCGCTGGATTTCTCCTGCACTTCTACCACGTGAGACATTTCTGCTCTaGCTGCCAGTGTGCAGAGTA +
Preference number: 3 (lower is better)
Translates to: STCNGRCDRWISPALLPRETFLL*LPVCRV
Trigger: TACTCTGCACACTGGCAGCAAGAGCAGAAATGTCTC...ACGTGGTAGAAGTGCAGGAGAAATCCAGCGGTCGCACCGCCCATTACAAGTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR-3UTR CAA 90 bp GATGGCGCTGTGCGGTCAATGATGCAGCTGTTATGTGACCTGTCGGGGAGGGAAAACAGAGGTTTAGCATaGCTGCTTTCTCTTCAAAGC +
Preference number: 3 (lower is better)
Translates to: DGAVRSMMQLLCDLSGRENRGLA*LLSLQS
Trigger: GCTTTGAAGAGAAAGCAGCAATGCTAAACCTCTGTT...TTCCCTCCCCGACAGGTCACATAACAGCTGCATCATTGACCGCACAGCGCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264203.7
ENST00000375142.5
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
ENST00000674449.1
3UTR-3UTR CAA 90 bp CTACATCTGGATCTGTCACAAGCTCAAGTCATGGTTCTTGGCCATTACCAACAAGCTCTGCAGCCCCAGTaGGCAGGGTTCCAAATGCCT +
Preference number: 3 (lower is better)
Translates to: LHLDLSQAQVMVLGHYQQALQPQ*AGFQMP
Trigger: AGGCATTTGGAACCCTGCCAACTGGGGCTGCAGAGC...TTGTTGGTAATGGCCAAGAACCATGACTTGAGCTTGTGACAGATCCAGATGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR-3UTR CAA 90 bp CTGGCTTCCTCAATGTCAGACCTCAGTCAAGTGTCTCCTCAAGAGGCCTCATGGCCATGTCCTGTGGTCTaGTGTGAGTCATTTAACCTC +
Preference number: 3 (lower is better)
Translates to: LASSMSDLSQVSPQEASWPCPVV*CESFNL
Trigger: GAGGTTAAATGACTCACACAAGACCACAGGACATGG...CCATGAGGCCTCTTGAGGAGACACTTGACTGAGGTCTGACATTGAGGAAGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR TCA 72 bp TGCTACGGAGAGTGCACTCAGCCGGACTCTCACGTTTaGTTCACACCAGCCATGGGAAGGAAGAATCAGAAA +
Preference number: 3 (lower is better)
Translates to: CYGECTQPDSHV*FTPAMGRKNQK
Trigger: TTTCTGATTCTTCCTTCCCATGGCTGGTGTGAATCAAACGTGAGAGTCCGGCTGAGTGCACTCTCCGTAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR TCA 72 bp AAGCACCCGGCTCATGGGAGGCACTCAAATGTCTGCTaGGTAAATAAATCGATGTTGGACTCTGGAGCTGGG +
Preference number: 3 (lower is better)
Translates to: KHPAHGRHSNVC*VNKSMLDSGAG
Trigger: CCCAGCTCCAGAGTCCAACATCGATTTATTTACTCAGCAGACATTTGAGTGCCTCCCATGAGCCGGGTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR TCA 72 bp ACCTTTACCTCACTGGCCTGGATACTTTCCCAGCCCTaGTGTCTTCCCCTTGATAGAGTAAAGTCTGGGGAC +
Preference number: 3 (lower is better)
Translates to: TFTSLAWILSQP*CLPLDRVKSGD
Trigger: GTCCCCAGACTTTACTCTATCAAGGGGAAGACATCAGGGCTGGGAAAGTATCCAGGCCAGTGAGGTAAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR CCA 72 bp CAAAATACAGGTCTCGATACTGGTCAAAGGCATTGTTaGCTTCCACCTCCAGCTTTCTCAGCCGAGCTGACG +
Preference number: 3 (lower is better)
Translates to: QNTGLDTGQRHC*LPPPAFSAELT
Trigger: CGTCAGCTCGGCTGAGAAAGCTGGAGGTGGAAGCCAACAATGCCTTTGACCAGTATCGAGACCTGTATTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR-3UTR CAA 90 bp CAGTGGAAAGAGTGGGTAGAGGGCTGCTCAAGAAGAGTGCTACGGAGAGTGCACCAACTGCTTAAACTTTaGGTTGTCAGGGATAGCATC +
Preference number: 3 (lower is better)
Translates to: QWKEWVEGCSRRVLRRVHQLLKL*VVRDSI
Trigger: GATGCTATCCCTGACAACCAAAAGTTTAAGCAGTTG...GTGCACTCTCCGTAGCACTCTTCTTGAGCAGCCCTCTACCCACTCTTTCCACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR-3UTR CAA 90 bp GTGTGTAGGTCCCTATGTCACCCTAAGCCACAAGGTGGCTTCTGGGCTTCCAAACTCAAGTCATGGTTCTaGGCCATTACCAACAAGCAA +
Preference number: 3 (lower is better)
Translates to: VCRSLCHPKPQGGFWASKLKSWF*AITNKQ
Trigger: TTGCTTGTTGGTAATGGCCAAGAACCATGACTTGAG...TTTGGAAGCCCAGAAGCCACCTTGTGGCTTAGGGTGACATAGGGACCTACACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR GCA 72 bp TCTTGGGCAGGTGAGCAGGGAGGAATGACTGCTGTTTaGATGGAGCAGCAGTGCATTAGCTACTTTCAAAAC +
Preference number: 3 (lower is better)
Translates to: SWAGEQGGMTAV*MEQQCISYFQN
Trigger: GTTTTGAAAGTAGCTAATGCACTGCTGCTCCATGCAAACAGCAGTCATTCCTCCCTGCTCACCTGCCCAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR CCA 72 bp ACTATAAATGGGTTGGTTCGTCACATGTGGTTCAGCTaGGAAAACGTTCCTCGCATGTGGTCCCAGGAGAGA +
Preference number: 3 (lower is better)
Translates to: TINGLVRHMWFS*ENVPRMWSQER
Trigger: TCTCTCCTGGGACCACATGCGAGGAACGTTTTCCCAGCTGAACCACATGTGACGAACCAACCCATTTATAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR CCA 72 bp ATTTCTCTTCAATACCACTCTGTAATCAGACCATGGTaGACTGGATCCATTCCCCCACAGTTCCCTGGCCCT +
Preference number: 3 (lower is better)
Translates to: ISLQYHSVIRPW*TGSIPPQFPGP
Trigger: AGGGCCAGGGAACTGTGGGGGAATGGATCCAGTCCACCATGGTCTGATTACAGAGTGGTATTGAAGAGAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR CCA 72 bp CACATTTCTCTTCAATACCACTCTGTAATCAGACCATaGTGGACTGGATCCATTCCCCCACAGTTCCCTGGC +
Preference number: 3 (lower is better)
Translates to: HISLQYHSVIRP*WTGSIPPQFPG
Trigger: GCCAGGGAACTGTGGGGGAATGGATCCAGTCCACCATGGTCTGATTACAGAGTGGTATTGAAGAGAAATGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR-3UTR CAA 90 bp CCAGGAGAGAGAGCTCTTCAGCACACTCCGATGGCACTGGGTGAGTCAAAATTCTGTTTAATAGCTGGATaGGCTTCTTACCAAATGGGC +
Preference number: 3 (lower is better)
Translates to: PGERALQHTPMALGESKFCLIAG*ASYQMG
Trigger: GCCCATTTGGTAAGAAGCCAATCCAGCTATTAAACA...GAATTTTGACTCACCCAGTGCCATCGGAGTGTGCTGAAGAGCTCTCTCTCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR-3UTR CAA 90 bp AGTCAAAGGCACACAGAAATCAAAAGCCACCTTACAAATACACATTTCCCAGGGGCTGAGGGTGTGCACTaGCTGGTTGACAGCTGTGTG +
Preference number: 3 (lower is better)
Translates to: SQRHTEIKSHLTNTHFPGAEGVH*LVDSCV
Trigger: CACACAGCTGTCAACCAGCAAGTGCACACCCTCAGC...CCCTGGGAAATGTGTATTTGTAAGGTGGCTTTTGATTTCTGTGTGCCTTTGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR-3UTR CAA 90 bp GACCAATGGCCTGAGAGAATCCAACTAGGGTCATTCTTTTCGGGGATCAAGCTGGGCGAAAGACAGCTCTaGATACTCTCCTTCATTCAC +
Preference number: 3 (lower is better)
Translates to: DQWPERIQLGSFFSGIKLGERQL*ILSFIH
Trigger: GTGAATGAAGGAGAGTATCAAGAGCTGTCTTTCGCC...CAGCTTGATCCCCGAAAAGAATGACCCTAGTTGGATTCTCTCAGGCCATTGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR TCA 72 bp AGCAAAGCCATGATCCAGATCCCAGAGGTAGACAGATaGGACGCCACCTTCAAAATACAGGTCTCGATACTG +
Preference number: 3 (lower is better)
Translates to: SKAMIQIPEVDR*DATFKIQVSIL
Trigger: CAGTATCGAGACCTGTATTTTGAAGGTGGCGTCTCATCTGTCTACCTCTGGGATCTGGATCATGGCTTTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674228.1
ENST00000674449.1
3UTR TCA 72 bp AAGGGGGAACTTTCCACTTCCACCTTCAAACTTAGCTaGAAGGGCAGGCTGTATTCCTGGAGTATCCTGAGA +
Preference number: 3 (lower is better)
Translates to: KGELSTSTFKLS*KGRLYSWSILR
Trigger: TCTCAGGATACTCCAGGAATACAGCCTGCCCTTTCAGCTAAGTTTGAAGGTGGAAGTGGAAAGTTCCCCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR TCA 72 bp GTGTCCAAGTACCATCCTGCAACTAAGCCTCAGAGGTaGTCTCTCTCATTATCTGGCTATGGCGAAAGACAG +
Preference number: 3 (lower is better)
Translates to: VSKYHPATKPQR*SLSLSGYGERQ
Trigger: CTGTCTTTCGCCATAGCCAGATAATGAGAGAGATCACCTCTGAGGCTTAGTTGCAGGATGGTACTTGGACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR TCA 72 bp AGCCTCCACCAGGTCATTCTTCAGAGCTTCTTGTTTTaGTTTGTCTGCAAAAGTCTGCACAGACCTCAGCCC +
Preference number: 3 (lower is better)
Translates to: SLHQVILQSFLF*FVCKSLHRPQP
Trigger: GGGCTGAGGTCTGTGCAGACTTTTGCAGACAAATCAAAACAAGAAGCTCTGAAGAATGACCTGGTGGAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR GCA 72 bp CAAACAACTCAGGATTCAGGAAGATGTTTGCTGCTCTaGTCCTGCTCTGTAAGGACTGCACTTATCTTGGCC +
Preference number: 3 (lower is better)
Translates to: QTTQDSGRCLLL*SCSVRTALILA
Trigger: GGCCAAGATAAGTGCAGTCCTTACAGAGCAGGAGCAGAGCAGCAAACATCTTCCTGAATCCTGAGTTGTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR GCA 72 bp GCTCTTAAAAAGGCAAAGGATGGAAGGCCTGCTGGGTaGCAATATGCAGAAACAAACTCCTTCCTCAGCTCA +
Preference number: 3 (lower is better)
Translates to: ALKKAKDGRPAG*QYAETNSFLSS
Trigger: TGAGCTGAGGAAGGAGTTTGTTTCTGCATATTGGCACCCAGCAGGCCTTCCATCCTTTGCCTTTTTAAGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR CCA 72 bp GATGAGACGCCACCTTCAAAATACAGGTCTCGATACTaGTCAAAGGCATTGTTGGCTTCCACCTCCAGCTTT +
Preference number: 3 (lower is better)
Translates to: DETPPSKYRSRY*SKALLASTSSF
Trigger: AAAGCTGGAGGTGGAAGCCAACAATGCCTTTGACCAGTATCGAGACCTGTATTTTGAAGGTGGCGTCTCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674228.1
ENST00000674449.1
3UTR CCA 72 bp CACACAGTACACCATATATCAGTGGTAGATACGGCCTaGCACTTCAACCTGTGTCCAAGTACCATCCTGCAA +
Preference number: 3 (lower is better)
Translates to: HTVHHISVVDTA*HFNLCPSTILQ
Trigger: TTGCAGGATGGTACTTGGACACAGGTTGAAGTGCCAGGCCGTATCTACCACTGATATATGGTGTACTGTGTG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR CCA 72 bp GGGGATCAAGCTGAAGAATCCTTGCATTTTGACCCGTaGAGGAGAAGGCAAGGAATAAAGGCTGCACTTCTT +
Preference number: 3 (lower is better)
Translates to: GDQAEESLHFDP*RRRQGIKAALL
Trigger: AAGAAGTGCAGCCTTTATTCCTTGCCTTCTCCTCCACGGGTCAAAATGCAAGGATTCTTCAGCTTGATCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR CCA 72 bp GCCAAGGCACAAGTCACTGAGAAACCGGTTAAAAGGTaGCGAGCAATGGCTTGCAGAAGTGGACAAACATTT +
Preference number: 3 (lower is better)
Translates to: AKAQVTEKPVKR*RAMACRSGQTF
Trigger: AAATGTTTGTCCACTTCTGCAAGCCATTGCTCGCCACCTTTTAACCGGTTTCTCAGTGACTTGTGCCTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR-3UTR CAA 90 bp AGGATGTCTCTTCCACCTTTACCTCACTGGCCTGGATACTTTCCCAGCCCTGATACGGCTATTTTTGGTTaGCTCTTAAAAAGGCAAAGG +
Preference number: 3 (lower is better)
Translates to: RMSLPPLPHWPGYFPSPDTAIFG*LLKRQR
Trigger: CCTTTGCCTTTTTAAGAGCAAACCAAAAATAGCCGT...ATCAGGGCTGGGAAAGTATCCAGGCCAGTGAGGTAAAGGTGGAAGAGACATCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR TCA 72 bp AGCCTCCACCAGGTCATTCTTCAGAGCTTCTTGTTTTaGTTTGTCTGCAAAAGTCTGCACAGACCTGCAAGG +
Preference number: 3 (lower is better)
Translates to: SLHQVILQSFLF*FVCKSLHRPAR
Trigger: CCTTGCAGGTCTGTGCAGACTTTTGCAGACAAATCAAAACAAGAAGCTCTGAAGAATGACCTGGTGGAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR TCA 72 bp AGCCTCCACCAGGTCATTCTTCAGAGCTTCTTGTTTTaGTTTGTCTGCAAAAGTCTGCACAGACCTGGATCG +
Preference number: 3 (lower is better)
Translates to: SLHQVILQSFLF*FVCKSLHRPGS
Trigger: CGATCCAGGTCTGTGCAGACTTTTGCAGACAAATCAAAACAAGAAGCTCTGAAGAATGACCTGGTGGAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375142.5
3UTR CCA 72 bp GATGAAACTGGGCTCTTCCCCAAGGCTGGCCCTAAATaGCGAAGTAAGGCAACACATCTGATTCACTTTATT +
Preference number: 3 (lower is better)
Translates to: DETGLFPKAGPK*RSKATHLIHFI
Trigger: AATAAAGTGAATCAGATGTGTTGCCTTACTTCGCCATTTAGGGCCAGCCTTGGGGAAGAGCCCAGTTTCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR-3UTR CAA 90 bp AGGATGTCTCTTCCACCTTTACCTCACTGGCCTGGATACTTTCCCAGCCCTGATCCAGATCCTAATTTGTaGAAAAGTCATGCTCCATTT +
Preference number: 3 (lower is better)
Translates to: RMSLPPLPHWPGYFPSPDPDPNL*KSHAPF
Trigger: AAATGGAGCATGACTTTTCAACAAATTAGGATCTGG...ATCAGGGCTGGGAAAGTATCCAGGCCAGTGAGGTAAAGGTGGAAGAGACATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR TCA 72 bp AGGAATCTAACGAGTGCACGGCGTGTCTGGTTAGCATaGAACAGAGGTTTAGCATTGCTGCTTTCTCTTCAA +
Preference number: 3 (lower is better)
Translates to: RNLTSARRVWLA*NRGLALLLSLQ
Trigger: TTGAAGAGAAAGCAGCAATGCTAAACCTCTGTTTCATGCTAACCAGACACGCCGTGCACTCGTTAGATTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264203.7
ENST00000375142.5
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
ENST00000674449.1
3UTR TCA 72 bp CAGATAGGGACCGACAGCTGCTACGGAGAGTGCAGATaGCACATCAGGACTTTACTTTCCAAAATCAACATA +
Preference number: 3 (lower is better)
Translates to: QIGTDSCYGECR*HIRTLLSKINI
Trigger: TATGTTGATTTTGGAAAGTAAAGTCCTGATGTGTCATCTGCACTCTCCGTAGCAGCTGTCGGTCCCTATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR TCA 72 bp CATCAGGATCCAACAATTCAGAAGCACCTGGAATCGTaGATTAAAGACCCTGTCAACACAGTCTGCTCTTCC +
Preference number: 3 (lower is better)
Translates to: HQDPTIQKHLES*IKDPVNTVCSS
Trigger: GGAAGAGCAGACTGTGTTGACAGGGTCTTTAATTCACGATTCCAGGTGCTTCTGAATTGTTGGATCCTGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR TCA 72 bp CATAGACACACCACATTTACTCTGTTGCTTTCAGTGTaGCTAACCCAAAGGAACCTGGCAAGCAGGAGAAAC +
Preference number: 3 (lower is better)
Translates to: HRHTTFTLLLSV*LTQRNLASRRN
Trigger: GTTTCTCCTGCTTGCCAGGTTCCTTTGGGTTAGTCACACTGAAAGCAACAGAGTAAATGTGGTGTGTCTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR TCA 72 bp ATGGAGCAGCAGTGCATTAGCTACTTTCAAAACATCTaGCTGATCCCAGATTACACGAGACAAAGGCCTGGA +
Preference number: 3 (lower is better)
Translates to: MEQQCISYFQNI*LIPDYTRQRPG
Trigger: TCCAGGCCTTTGTCTCGTGTAATCTGGGATCAGTCAGATGTTTTGAAAGTAGCTAATGCACTGCTGCTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR GCA 72 bp TTCAGAGCTTCTTGTTTTGATTTGTCTGCAAAAGTCTaGACAGACCTGCAAGGGAGGAAAGGCGTTATCAGC +
Preference number: 3 (lower is better)
Translates to: FRASCFDLSAKV*TDLQGRKGVIS
Trigger: GCTGATAACGCCTTTCCTCCCTTGCAGGTCTGTGCAGACTTTTGCAGACAAATCAAAACAAGAAGCTCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR GCA 72 bp TTTCTTATACACAGTAGGCACTGTACCAGTGGCACCTaGTGTTATTATGAATCACGATGCAGGGGAACAGCA +
Preference number: 3 (lower is better)
Translates to: FLIHSRHCTSGT*CYYESRCRGTA
Trigger: TGCTGTTCCCCTGCATCGTGATTCATAATAACAGCAGGTGCCACTGGTACAGTGCCTACTGTGTATAAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR CCA 72 bp CTCATCCTCAGAGCTTATTCACTGGTCAATGACCAATaGCCTGAGAGAATCCAACTAGGGTCATTCTTTTCG +
Preference number: 3 (lower is better)
Translates to: LILRAYSLVNDQ*PERIQLGSFFS
Trigger: CGAAAAGAATGACCCTAGTTGGATTCTCTCAGGCCATTGGTCATTGACCAGTGAATAAGCTCTGAGGATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR GCA 72 bp AATGCTTGGCCAGGTAACAGATTCCAGATAGAACACTaGCACTTAGGATTTACCTCTCAAAACTCACAAGCG +
Preference number: 3 (lower is better)
Translates to: NAWPGNRFQIEH*HLGFTSQNSQA
Trigger: CGCTTGTGAGTTTTGAGAGGTAAATCCTAAGTGGCAGTGTTCTATCTGGAATCTGTTACCTGGCCAAGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR CCA 72 bp AAGTCACTGAGAAACCGGTTAAAAGGTGGCGAGCAATaGCTTGCAGAAGTGGACAAACATTTACTGATAGCT +
Preference number: 3 (lower is better)
Translates to: KSLRNRLKGGEQ*LAEVDKHLLIA
Trigger: AGCTATCAGTAAATGTTTGTCCACTTCTGCAAGCCATTGCTCGCCACCTTTTAACCGGTTTCTCAGTGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR-3UTR CAA 90 bp TTTCTAAGAAAGGAATCTAACGAGTGCACGGCGTGTCTGGTTAGCATGAAACAGAACAGAGGTTTAGCATaGCTGCTTTCTCTTCAAAGC +
Preference number: 3 (lower is better)
Translates to: FLRKESNECTACLVSMKQNRGLA*LLSLQS
Trigger: GCTTTGAAGAGAAAGCAGCAATGCTAAACCTCTGTT...CTGTTTCATGCTAACCAGACACGCCGTGCACTCGTTAGATTCCTTTCTTAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264203.7
ENST00000375142.5
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
ENST00000674449.1
3UTR-3UTR CAA 90 bp AGGAGAAACGCAGACATTTGGTTCATGCTGGGGAAATACACGTTTCTGAGTATCCAACTGCTTAAACTTTaGGTTGTCAGGGATAGCATC +
Preference number: 3 (lower is better)
Translates to: RRNADIWFMLGKYTFLSIQLLKL*VVRDSI
Trigger: GATGCTATCCCTGACAACCAAAAGTTTAAGCAGTTG...GATACTCAGAAACGTGTATTTCCCCAGCATGAACCAAATGTCTGCGTTTCTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
3UTR TCA 72 bp GGTTTGATATCCCAGTTCCACCACTTACTAGCTCTGTaGACCTGGGTAAGTTATATCACCTTTCTGATCTGT +
Preference number: 3 (lower is better)
Translates to: GLISQFHHLLAL*TWVSYITFLIC
Trigger: ACAGATCAGAAAGGTGATATAACTTACCCAGGTTCACAGAGCTAGTAAGTGGTGGAACTGGGATATCAAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR GCA 72 bp CAGAAAACGAGTTTTCTAAGAAAGGAATCTAACGAGTaGACGGCGTGTCTGGTTAGCATGAAACAGAGGTTT +
Preference number: 3 (lower is better)
Translates to: QKTSFLRKESNE*TACLVSMKQRF
Trigger: AAACCTCTGTTTCATGCTAACCAGACACGCCGTGCACTCGTTAGATTCCTTTCTTAGAAAACTCGTTTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264203.7
ENST00000375142.5
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
ENST00000674449.1
3UTR CCA 72 bp CTTCCCTACATCTGGATCTGTCACAAGCTCAAGTCATaGTTCTTGGCCATTACCAACAAGCAAGACTATTTT +
Preference number: 3 (lower is better)
Translates to: LPYIWICHKLKS*FLAITNKQDYF
Trigger: AAAATAGTCTTGCTTGTTGGTAATGGCCAAGAACCATGACTTGAGCTTGTGACAGATCCAGATGTAGGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR TCA 72 bp TATGATTCTTGGCCCTCATGGATGTGTGGGTATTTTTaGAACAGCTTAACAACGGATTTCAGCTGGATTCAC +
Preference number: 3 (lower is better)
Translates to: YDSWPSWMCGYF*NSLTTDFSWIH
Trigger: GTGAATCCAGCTGAAATCCGTTGTTAAGCTGTTTCAAAAATACCCACACATCCATGAGGGCCAAGAATCATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR TCA 72 bp GAAATAAAGGACGAAAAATGCTGGTCTGAGATTGTTTaGATGACAAGGCTAAAGGGGAAGCTAGGGAAGAAG +
Preference number: 3 (lower is better)
Translates to: EIKDEKCWSEIV*MTRLKGKLGKK
Trigger: CTTCTTCCCTAGCTTCCCCTTTAGCCTTGTCATTCAAACAATCTCAGACCAGCATTTTTCGTCCTTTATTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR CCA 72 bp CATGTCCTGTGGTCTTGTGTGAGTCATTTAACCTCTTaGAACCTTGGTCTCATTTGTAAAAGGAGGAACAAA +
Preference number: 3 (lower is better)
Translates to: HVLWSCVSHLTS*NLGLICKRRNK
Trigger: TTTGTTCCTCCTTTTACAAATGAGACCAAGGTTCCAAGAGGTTAAATGACTCACACAAGACCACAGGACATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR-3UTR CAA 90 bp AAGCAACTCCCAAACACACACGGAATAAGATTTCCAGTTTTTCTTCTCTCTTTCAACAGAGGTTTAGCATaGCTGCTTTCTCTTCAAAGC +
Preference number: 3 (lower is better)
Translates to: KQLPNTHGIRFPVFLLSFNRGLA*LLSLQS
Trigger: GCTTTGAAGAGAAAGCAGCAATGCTAAACCTCTGTT...GAAAGAGAGAAGAAAAACTGGAAATCTTATTCCGTGTGTGTTTGGGAGTTGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264203.7
ENST00000375142.5
3UTR TCA 72 bp AAGTTTATGAAGCCAAGGGAACATCTTCACATCATATaGTTCTTGGCCCTCATGGATGTGTGGGTATTTTTG +
Preference number: 3 (lower is better)
Translates to: KFMKPREHLHII*FLALMDVWVFL
Trigger: CAAAAATACCCACACATCCATGAGGGCCAAGAATCATATGATGTGAAGATGTTCCCTTGGCTTCATAAACTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR GCA 72 bp CATGAAGTGACCAATGTTTGCAAGCAGAGACTTTCTTaGCTAGTTAAACAGATTCACGGCTATTTTTGGTTT +
Preference number: 3 (lower is better)
Translates to: HEVTNVCKQRLS*LVKQIHGYFWF
Trigger: AAACCAAAAATAGCCGTGAATCTGTTTAACTAGGCAAGAAAGTCTCTGCTTGCAAACATTGGTCACTTCATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR CCA 72 bp ACGCTCATCAACAAAGCCAGAAACAATGAAGGCTTATaGAGATTTCACAGTTTACAAAACGCCTTTCACATA +
Preference number: 3 (lower is better)
Translates to: TLINKARNNEGL*RFHSLQNAFHI
Trigger: TATGTGAAAGGCGTTTTGTAAACTGTGAAATCTCCATAAGCCTTCATTGTTTCTGGCTTTGTTGATGAGCGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR GCA 90 bp CGGCCTCCGTGGGACGGGAGAGTCTGCGCAGGACGGCACCGAGGGCCACCTCTGTGGGACGGGAGAGTCTaGGCAGGACGGCACCGAGGG +
Preference number: 4 (lower is better)
Translates to: RPPWDGRVCAGRHRGPPLWDGRV*AGRHRG
Trigger: CCCTCGGTGCCGTCCTGCGCAGACTCTCCCGTCCCA...CAGAGGTGGCCCTCGGTGCCGTCCTGCGCAGACTCTCCCGTCCCACGGAGGCCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264202.8
ENST00000264203.7
ENST00000375142.5
CDS-3UTR GCA 90 bp CTGGCTGCCAGGGTTTCTACGCCAGGACGCCCCCAGTGGGCGGCCAGGGAACTGGGGCAGCCCCGGGACTaGAGCCTGCCTCTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: LAARVSTPGRPQWAARELGQPRD*SLPLLW
Trigger: CCAGAGGAGAGGCAGGCTGCAGTCCCGGGGCTGCCC...CAGTTCCCTGGCCGCCCACTGGGGGCGTCCTGGCGTAGAAACCCTGGCAGCCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR TCA 90 bp GCGGCCTCCGTGGGACGGGAGAGTCTGCGCAGGACGGCACCGAGGGCCACCTCTGCACAGTCCAGCTGCTaGTCACTCATGGTGGCGGCG +
Preference number: 4 (lower is better)
Translates to: AASVGRESLRRTAPRATSAQSSC*SLMVAA
Trigger: CGCCGCCACCATGAGTGATCAGCAGCTGGACTGTGC...AGAGGTGGCCCTCGGTGCCGTCCTGCGCAGACTCTCCCGTCCCACGGAGGCCGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264202.8
ENST00000375142.5
CDS-3UTR GCA 90 bp GGACTGTCCCTGGCTCTGCGGCGGCCAAAGGCATCAGCCCCCACGGCCCCCAGGCTGGACAAGGGCCTCTaGGAGGAGTGCCAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: GLSLALRRPKASAPTAPRLDKGL*EECQRP
Trigger: TGGCCTCTGGCACTCCTCGCAGAGGCCCTTGTCCAG...CCTGGGGGCCGTGGGGGCTGATGCCTTTGGCCGCCGCAGAGCCAGGGACAGTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR CCA 90 bp CGGCCTCCGTGGGACGGGAGAGTCTGCGCAGGACGGCACCGAGGGCCACCTCTGGGGCTGGCCAAGGCCTaGGCGAGAGAACCCTGTATC +
Preference number: 4 (lower is better)
Translates to: RPPWDGRVCAGRHRGPPLGLAKA*AREPCI
Trigger: GATACAGGGTTCTCTCGCCCAGGCCTTGGCCAGCCC...CAGAGGTGGCCCTCGGTGCCGTCCTGCGCAGACTCTCCCGTCCCACGGAGGCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264203.7
CDS-3UTR CCA 90 bp CTTCCCAGGACTGTCCCTGGCTCTGCGGCGGCCAAAGGCATCAGCCCCCACGGCGGACGTCAGAGAGGCTaGGGCCCCCTGAGAACGCCC +
Preference number: 4 (lower is better)
Translates to: LPRTVPGSAAAKGISPHGGRQRG*GPLRTP
Trigger: GGGCGTTCTCAGGGGGCCCCAGCCTCTCTGACGTCC...GCCGTGGGGGCTGATGCCTTTGGCCGCCGCAGAGCCAGGGACAGTCCTGGGAAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR CCA 90 bp GGACTGTCCCTGGCTCTGCGGCGGCCAAAGGCATCAGCCCCCACGGCCCCCAGGCATGGACCCGCTTCCTaGGGTGAGGCTCTGGGTCAC +
Preference number: 4 (lower is better)
Translates to: GLSLALRRPKASAPTAPRHGPAS*GEALGH
Trigger: GTGACCCAGAGCCTCACCCCAGGAAGCGGGTCCATG...CCTGGGGGCCGTGGGGGCTGATGCCTTTGGCCGCCGCAGAGCCAGGGACAGTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR CCA 90 bp CTGGCTGCCAGGGTTTCTACGCCAGGACGCCCCCAGTGGGCGGCCAGGGAACTGGGACTGGTGAGGCGGTaGAGGCCTGGGGGCCACCAT +
Preference number: 4 (lower is better)
Translates to: LAARVSTPGRPQWAARELGLVRR*RPGGHH
Trigger: ATGGTGGCCCCCAGGCCTCCACCGCCTCACCAGTCC...CAGTTCCCTGGCCGCCCACTGGGGGCGTCCTGGCGTAGAAACCCTGGCAGCCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR CCA 90 bp CTTCCCAGGACTGTCCCTGGCTCTGCGGCGGCCAAAGGCATCAGCCCCCACGGCGGACTGGTGAGGCGGTaGAGGCCTGGGGGCCACCAT +
Preference number: 4 (lower is better)
Translates to: LPRTVPGSAAAKGISPHGGLVRR*RPGGHH
Trigger: ATGGTGGCCCCCAGGCCTCCACCGCCTCACCAGTCC...GCCGTGGGGGCTGATGCCTTTGGCCGCCGCAGAGCCAGGGACAGTCCTGGGAAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR TCA 90 bp CGTGGGACGGGAGAGTCTGCGCAGGACGGCACCGAGGGCCACCTCTGCTCCCAGCTTTCTCAGCCGAGCTaGCGGCATGGCCCCATCCTC +
Preference number: 4 (lower is better)
Translates to: RGTGESAQDGTEGHLCSQLSQPS*RHGPIL
Trigger: GAGGATGGGGCCATGCCGTCAGCTCGGCTGAGAAAG...CTGGGAGCAGAGGTGGCCCTCGGTGCCGTCCTGCGCAGACTCTCCCGTCCCACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264202.8
ENST00000264203.7
ENST00000375142.5
CDS-3UTR TCA 90 bp GGACTGTCCCTGGCTCTGCGGCGGCCAAAGGCATCAGCCCCCACGGCCCCCAGGCGCTGGGTCAGCACTTaGGAGAGCTCCCTCTGCAAC +
Preference number: 4 (lower is better)
Translates to: GLSLALRRPKASAPTAPRRWVST*ESSLCN
Trigger: GTTGCAGAGGGAGCTCTCTCAAGTGCTGACCCAGCG...CCTGGGGGCCGTGGGGGCTGATGCCTTTGGCCGCCGCAGAGCCAGGGACAGTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR TCA 90 bp CTTCCCAGGACTGTCCCTGGCTCTGCGGCGGCCAAAGGCATCAGCCCCCACGGCGACAAACTGCAGGGCTaGGGAGGCTCCGGGGGCAAG +
Preference number: 4 (lower is better)
Translates to: LPRTVPGSAAAKGISPHGDKLQG*GGSGGK
Trigger: CTTGCCCCCGGAGCCTCCTCAGCCCTGCAGTTTGTC...GCCGTGGGGGCTGATGCCTTTGGCCGCCGCAGAGCCAGGGACAGTCCTGGGAAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR GCA 90 bp GGCGGCCAAAGGCATCAGCCCCCACGGCCCCCAGGCTCCAAATCTCAGCCGATTGGGCAGCCCCGGGACTaGAGCCTGCCTCTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: GGQRHQPPRPPGSKSQPIGQPRD*SLPLLW
Trigger: CCAGAGGAGAGGCAGGCTGCAGTCCCGGGGCTGCCC...AATCGGCTGAGATTTGGAGCCTGGGGGCCGTGGGGGCTGATGCCTTTGGCCGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR GCA 90 bp CTGGCTGCCAGGGTTTCTACGCCAGGACGCCCCCAGTGGGCGGCCAGGGAACTGGAGTGGTATCGCCGCTaGAGAGGTCCACGCTGGCGG +
Preference number: 4 (lower is better)
Translates to: LAARVSTPGRPQWAARELEWYRR*RGPRWR
Trigger: CCGCCAGCGTGGACCTCTGCAGCGGCGATACCACTC...CAGTTCCCTGGCCGCCCACTGGGGGCGTCCTGGCGTAGAAACCCTGGCAGCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR CCA 90 bp GGAGGTCAACATGGCCAGCGGGAGATGCGGCGGGCAAAGCAGCAGCGCACAGGAGCTGCTGATCACTCATaGTGGCGGCGGCGGCGGCGG +
Preference number: 4 (lower is better)
Translates to: GGQHGQREMRRAKQQRTGAADHS*WRRRRR
Trigger: CCGCCGCCGCCGCCGCCACCATGAGTGATCAGCAGC...TCCTGTGCGCTGCTGCTTTGCCCGCCGCATCTCCCGCTGGCCATGTTGACCTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674432.1
3UTR CAA 72 bp GCGGAGCAGCAGCCGGACCGGCAGGGTCTCGGCGGGTaGGTGAGTCCTGTTTTAGTGGGGAGGGTCTCGCGG +
Preference number: 4 (lower is better)
Translates to: AEQQPDRQGLGG*VSPVLVGRVSR
Trigger: CCGCGAGACCCTCCCCACTAAAACAGGACTCACCAACCCGCCGAGACCCTGCCGGTCCGGCTGCTGCTCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR TCA 90 bp CGGCCTCCGTGGGACGGGAGAGTCTGCGCAGGACGGCACCGAGGGCCACCTCTGGCACTGCGGTGTCTCTaGGCAGGCCTGAAAGGTCAT +
Preference number: 4 (lower is better)
Translates to: RPPWDGRVCAGRHRGPPLALRCL*AGLKGH
Trigger: ATGACCTTTCAGGCCTGCTCAGAGACACCGCAGTGC...CAGAGGTGGCCCTCGGTGCCGTCCTGCGCAGACTCTCCCGTCCCACGGAGGCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264203.7
CDS-3UTR GCA 90 bp CGTGGGACGGGAGAGTCTGCGCAGGACGGCACCGAGGGCCACCTCTGCTCCCAGACTGGCCTGGCGAGATaGGAGTCACGGTCAGGCATG +
Preference number: 4 (lower is better)
Translates to: RGTGESAQDGTEGHLCSQTGLAR*ESRSGM
Trigger: CATGCCTGACCGTGACTCGCATCTCGCCAGGCCAGT...CTGGGAGCAGAGGTGGCCCTCGGTGCCGTCCTGCGCAGACTCTCCCGTCCCACG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264203.7
CDS-3UTR GCA 90 bp AGAGCGAGGTGTGGCAGAAGCAGGCTCGGAGCCGGAGGAGGGTGGCTATCGGCTCCCCAGGCTGCTCGCTaGCCGCTCCTGACTTCTCCC +
Preference number: 4 (lower is better)
Translates to: RARCGRSRLGAGGGWLSAPQAAR*PLLTSP
Trigger: GGGAGAAGTCAGGAGCGGGCAGCGAGCAGCCTGGGG...AGCCGATAGCCACCCTCCTCCGGCTCCGAGCCTGCTTCTGCCACACCTCGCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264203.7
CDS-3UTR GCA 90 bp GCGAGGTGTGGCAGAAGCAGGCTCGGAGCCGGAGGAGGGTGGCTATCGGCTTTAGACGCTGCCCCAGGCTaGTCGCTGCCCGCTCCTGAC +
Preference number: 4 (lower is better)
Translates to: ARCGRSRLGAGGGWLSALDAAPG*SLPAPD
Trigger: GTCAGGAGCGGGCAGCGAGCAGCCTGGGGCAGCGTC...TAAAGCCGATAGCCACCCTCCTCCGGCTCCGAGCCTGCTTCTGCCACACCTCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264203.7
CDS-3UTR GCA 90 bp CCAGAGGCAGCCGGGCTGCCCGGAATGTGGTGTCATGGCTCCCCTAGGCCCAGGGCCCTGCCTGCACGTTaGGCTCTGCTGTCTCGGAGA +
Preference number: 4 (lower is better)
Translates to: PEAAGLPGMWCHGSPRPRALPAR*ALLSRR
Trigger: TCTCCGAGACAGCAGAGCGCAACGTGCAGGCAGGGC...CCTGGGCCTAGGGGAGCCATGACACCACATTCCGGGCAGCCCGGCTGCCTCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR GCA 90 bp CTTCCCAGGACTGTCCCTGGCTCTGCGGCGGCCAAAGGCATCAGCCCCCACGGCACTGAGGGCCCTGCCTaGACGTTGCGCTCTGCTGTC +
Preference number: 4 (lower is better)
Translates to: LPRTVPGSAAAKGISPHGTEGPA*TLRSAV
Trigger: GACAGCAGAGCGCAACGTGCAGGCAGGGCCCTCAGT...GCCGTGGGGGCTGATGCCTTTGGCCGCCGCAGAGCCAGGGACAGTCCTGGGAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR GCA 90 bp CCAGAGGCAGCCGGGCTGCCCGGAATGTGGTGTCATGGCTCCCCTAGGCCCAGGACAGCTACCCTGGGTTaGTGGCTGGGGACTCAGGCC +
Preference number: 4 (lower is better)
Translates to: PEAAGLPGMWCHGSPRPRTATLG*WLGTQA
Trigger: GGCCTGAGTCCCCAGCCAGCAACCCAGGGTAGCTGT...CCTGGGCCTAGGGGAGCCATGACACCACATTCCGGGCAGCCCGGCTGCCTCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR CCA 90 bp GCGAGGTGTGGCAGAAGCAGGCTCGGAGCCGGAGGAGGGTGGCTATCGGCTTTAGCTGATCACTCATGGTaGCGGCGGCGGCGGCGGTCC +
Preference number: 4 (lower is better)
Translates to: ARCGRSRLGAGGGWLSALADHSW*RRRRRS
Trigger: GGACCGCCGCCGCCGCCGCCACCATGAGTGATCAGC...TAAAGCCGATAGCCACCCTCCTCCGGCTCCGAGCCTGCTTCTGCCACACCTCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264202.8
ENST00000375142.5
ENST00000375144.6
ENST00000674449.1
CDS-3UTR CCA 90 bp CCCCCACCCCGCGGCCTCCGTGGGACGGGAGAGTCTGCGCAGGACGGCACCGAGTGCCTCCGAGGTTCATaGTGCCAGAGCCAGATTTGT +
Preference number: 4 (lower is better)
Translates to: PPPRGLRGTGESAQDGTECLRGS*CQSQIC
Trigger: ACAAATCTGGCTCTGGCACCATGAACCTCGGAGGCA...CTCGGTGCCGTCCTGCGCAGACTCTCCCGTCCCACGGAGGCCGCGGGGTGGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264202.8
ENST00000264203.7
ENST00000375142.5
CDS-3UTR CCA 90 bp CGTGGGACGGGAGAGTCTGCGCAGGACGGCACCGAGGGCCACCTCTGCTCCCAGCCAGGCGCCCGATGTTaGCTATGTGTGGGGAGCAGT +
Preference number: 4 (lower is better)
Translates to: RGTGESAQDGTEGHLCSQPGARC*LCVGSS
Trigger: ACTGCTCCCCACACATAGCCAACATCGGGCGCCTGG...CTGGGAGCAGAGGTGGCCCTCGGTGCCGTCCTGCGCAGACTCTCCCGTCCCACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264202.8
ENST00000264203.7
ENST00000375142.5
CDS-3UTR CCA 90 bp GAGGTCCACGCTGGCGGTGGTCGTGGTATTCAGGGGCTCGCCACCACCACCCGCGGGCTGCCCGGAATGTaGTGTCATGGCTCCCCTAGG +
Preference number: 4 (lower is better)
Translates to: EVHAGGGRGIQGLATTTRGLPGM*CHGSPR
Trigger: CCTAGGGGAGCCATGACACCACATTCCGGGCAGCCC...GCGGGTGGTGGTGGCGAGCCCCTGAATACCACGACCACCGCCAGCGTGGACCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR CCA 90 bp ATCTTGAGCAGACCTGGCTGCCAGGGTTTCTACGCCAGGACGCCCCCAGTGGGCTGGCGTCAGGGAGGCTaGGGGCCTGAGAAGGCCCGG +
Preference number: 4 (lower is better)
Translates to: ILSRPGCQGFYARTPPVGWRQGG*GPEKAR
Trigger: CCGGGCCTTCTCAGGCCCCCAGCCTCCCTGACGCCA...GCCCACTGGGGGCGTCCTGGCGTAGAAACCCTGGCAGCCAGGTCTGCTCAAGAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR CCA 90 bp TCATGTCAGAGGCCTGCCTCCTGCTCTGTCCGCCGTGGACCTGGAGGGTCCAGAGGCCCTGCCTGCATGTaGCGTCAGGGAGGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: SCQRPASCSVRRGPGGSRGPACM*RQGGWG
Trigger: CCCCCAGCCTCCCTGACGCCACATGCAGGCAGGGCC...TCTGGACCCTCCAGGTCCACGGCGGACAGAGCAGGAGGCAGGCCTCTGACATGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR CCA 90 bp GAGGTCCACGCTGGCGGTGGTCGTGGTATTCAGGGGCTCGCCACCACCACCCGCGCCGGTGCACACAAGTaGCTGCTGCTGGAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: EVHAGGGRGIQGLATTTRAGAHK*LLLERQ
Trigger: CTGCCTCTCCAGCAGCAGCCACTTGTGTGCACCGGC...GCGGGTGGTGGTGGCGAGCCCCTGAATACCACGACCACCGCCAGCGTGGACCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR CCA 90 bp GGAGGTCAACATGGCCAGCGGGAGATGCGGCGGGCAAAGCAGCAGCGCACAGGAGGCAGATCCCTGCCCTaGGGACAGTCAGGCCGGTGC +
Preference number: 4 (lower is better)
Translates to: GGQHGQREMRRAKQQRTGGRSLP*GQSGRC
Trigger: GCACCGGCCTGACTGTCCCCAGGGCAGGGATCTGCC...TCCTGTGCGCTGCTGCTTTGCCCGCCGCATCTCCCGCTGGCCATGTTGACCTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR CCA 90 bp CTGGCTGCCAGGGTTTCTACGCCAGGACGCCCCCAGTGGGCGGCCAGGGAACTGCTCCAGCAGAGCATCTaGGCCAGCCAGGGTGGAGTC +
Preference number: 4 (lower is better)
Translates to: LAARVSTPGRPQWAARELLQQSI*ASQGGV
Trigger: GACTCCACCCTGGCTGGCCCAGATGCTCTGCTGGAG...CAGTTCCCTGGCCGCCCACTGGGGGCGTCCTGGCGTAGAAACCCTGGCAGCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR CCA 90 bp GGCCAAAGGCATCAGCCCCCACGGCCCCCAGGCTCCAAATCTCAGCCGATTCCCGCACCCCTTCTGGGGTaGGCCTTCAGTGCGCAGCCC +
Preference number: 4 (lower is better)
Translates to: GQRHQPPRPPGSKSQPIPAPLLG*AFSAQP
Trigger: GGGCTGCGCACTGAAGGCCCACCCCAGAAGGGGTGC...GGGAATCGGCTGAGATTTGGAGCCTGGGGGCCGTGGGGGCTGATGCCTTTGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR TCA 90 bp CGTGGGACGGGAGAGTCTGCGCAGGACGGCACCGAGGGCCACCTCTGCTCCCAGAGTGGAAACATGACGTaGCTAGGGACGCTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: RGTGESAQDGTEGHLCSQSGNMT*LGTLPQ
Trigger: CTGGGGCAGCGTCCCTAGTCACGTCATGTTTCCACT...CTGGGAGCAGAGGTGGCCCTCGGTGCCGTCCTGCGCAGACTCTCCCGTCCCACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264203.7
CDS-3UTR TCA 90 bp GAGGTCCACGCTGGCGGTGGTCGTGGTATTCAGGGGCTCGCCACCACCACCCGCCGCTGGGTCAGCACTTaGGAGAGCTCCCTCTGCAAC +
Preference number: 4 (lower is better)
Translates to: EVHAGGGRGIQGLATTTRRWVST*ESSLCN
Trigger: GTTGCAGAGGGAGCTCTCTCAAGTGCTGACCCAGCG...GCGGGTGGTGGTGGCGAGCCCCTGAATACCACGACCACCGCCAGCGTGGACCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR GCA 90 bp GCGGCCTCCGTGGGACGGGAGAGTCTGCGCAGGACGGCACCGAGGGCCACCTCTAGGTTTTTCTCGATTTaGTGGGGAGGCAGGCGCCTC +
Preference number: 4 (lower is better)
Translates to: AASVGRESLRRTAPRATSRFFSI*WGGRRL
Trigger: GAGGCGCCTGCCTCCCCAGCAAATCGAGAAAAACCT...AGAGGTGGCCCTCGGTGCCGTCCTGCGCAGACTCTCCCGTCCCACGGAGGCCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264202.8
ENST00000264203.7
ENST00000375142.5
CDS-3UTR GCA 90 bp CGGCGGCCAAAGGCATCAGCCCCCACGGCCCCCAGGCTCCAAATCTCAGCCGATACGGGAATGTGGCTGTaGACCGACCGGGAGCACACG +
Preference number: 4 (lower is better)
Translates to: RRPKASAPTAPRLQISADTGMWL*TDREHT
Trigger: CGTGTGCTCCCGGTCGGTGCACAGCCACATTCCCGT...ATCGGCTGAGATTTGGAGCCTGGGGGCCGTGGGGGCTGATGCCTTTGGCCGCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR GCA 90 bp CTTCCCAGGACTGTCCCTGGCTCTGCGGCGGCCAAAGGCATCAGCCCCCACGGCGGCTTCTGGGATCCCTaGACCAGCATCAGAGGCTCC +
Preference number: 4 (lower is better)
Translates to: LPRTVPGSAAAKGISPHGGFWDP*TSIRGS
Trigger: GGAGCCTCTGATGCTGGTGCAGGGATCCCAGAAGCC...GCCGTGGGGGCTGATGCCTTTGGCCGCCGCAGAGCCAGGGACAGTCCTGGGAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR GCA 90 bp GGAGGTCAACATGGCCAGCGGGAGATGCGGCGGGCAAAGCAGCAGCGCACAGGAATGGCCAGCGGGAGATaGGGCGGGCAAAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GGQHGQREMRRAKQQRTGMASGR*GGQSSS
Trigger: GCTGCTGCTTTGCCCGCCGCATCTCCCGCTGGCCAT...TCCTGTGCGCTGCTGCTTTGCCCGCCGCATCTCCCGCTGGCCATGTTGACCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR GCA 90 bp CGGCGGCCAAAGGCATCAGCCCCCACGGCCCCCAGGCTCCAAATCTCAGCCGATTCCCCAGGGGCTTCTTaGCAAGCTCACAGCGGGAGG +
Preference number: 4 (lower is better)
Translates to: RRPKASAPTAPRLQISADSPGAS*QAHSGR
Trigger: CCTCCCGCTGTGAGCTTGGCAAGAAGCCCCTGGGGA...ATCGGCTGAGATTTGGAGCCTGGGGGCCGTGGGGGCTGATGCCTTTGGCCGCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR CCA 90 bp GCCTGGGGACTGTGCAGGTTGGCTGGGCGGGAAAGTGTGTTTGGTGTATCGGGCGCTGATCACTCATGGTaGCGGCGGCGGCGGCGGTCC +
Preference number: 4 (lower is better)
Translates to: AWGLCRLAGRESVFGVSGADHSW*RRRRRS
Trigger: GGACCGCCGCCGCCGCCGCCACCATGAGTGATCAGC...GCCCGATACACCAAACACACTTTCCCGCCCAGCCAACCTGCACAGTCCCCAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375144.6
CDS-3UTR CCA 90 bp CTGATTTGCTGCATGGACCCGCTTCCTGGGGTGAGGCTCTGGGTCACTGGGCTGGCTGATCACTCATGGTaGCGGCGGCGGCGGCGGTCC +
Preference number: 4 (lower is better)
Translates to: LICCMDPLPGVRLWVTGLADHSW*RRRRRS
Trigger: GGACCGCCGCCGCCGCCGCCACCATGAGTGATCAGC...CAGCCCAGTGACCCAGAGCCTCACCCCAGGAAGCGGGTCCATGCAGCAAATCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674432.1
CDS-3UTR CCA 90 bp CTGGCTGCCAGGGTTTCTACGCCAGGACGCCCCCAGTGGGCGGCCAGGGAACTGCCAGGCGCCCGATGTTaGCTATGTGTGGGGAGCAGT +
Preference number: 4 (lower is better)
Translates to: LAARVSTPGRPQWAARELPGARC*LCVGSS
Trigger: ACTGCTCCCCACACATAGCCAACATCGGGCGCCTGG...CAGTTCCCTGGCCGCCCACTGGGGGCGTCCTGGCGTAGAAACCCTGGCAGCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR CCA 90 bp CGAGGTGTGGCAGAAGCAGGCTCGGAGCCGGAGGAGGGTGGCTATCGGCTTTATTGGCGTCAGGGAGGCTaGGGGCCTGAGAAGGCCCGG +
Preference number: 4 (lower is better)
Translates to: RGVAEAGSEPEEGGYRLYWRQGG*GPEKAR
Trigger: CCGGGCCTTCTCAGGCCCCCAGCCTCCCTGACGCCA...ATAAAGCCGATAGCCACCCTCCTCCGGCTCCGAGCCTGCTTCTGCCACACCTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375144.6
CDS-3UTR CCA 90 bp TCATGTCAGAGGCCTGCCTCCTGCTCTGTCCGCCGTGGACCTGGAGGGTCCAGATGTCCGCCGTGGACCTaGAGGGTCCAGAGAGCGCCC +
Preference number: 4 (lower is better)
Translates to: SCQRPASCSVRRGPGGSRCPPWT*RVQRAP
Trigger: GGGCGCTCTCTGGACCCTCCAGGTCCACGGCGGACA...TCTGGACCCTCCAGGTCCACGGCGGACAGAGCAGGAGGCAGGCCTCTGACATGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR CCA 90 bp CTGGCTGCCAGGGTTTCTACGCCAGGACGCCCCCAGTGGGCGGCCAGGGAACTGGGGGACTGTGCAGGTTaGCTGGGCGGGAAAGTGTGT +
Preference number: 4 (lower is better)
Translates to: LAARVSTPGRPQWAARELGDCAG*LGGKVC
Trigger: ACACACTTTCCCGCCCAGCCAACCTGCACAGTCCCC...CAGTTCCCTGGCCGCCCACTGGGGGCGTCCTGGCGTAGAAACCCTGGCAGCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR CCA 90 bp ATCTTGAGCAGACCTGGCTGCCAGGGTTTCTACGCCAGGACGCCCCCAGTGGGCGCACCCCTTCTGGGGTaGGCCTTCAGTGCGCAGCCC +
Preference number: 4 (lower is better)
Translates to: ILSRPGCQGFYARTPPVGAPLLG*AFSAQP
Trigger: GGGCTGCGCACTGAAGGCCCACCCCAGAAGGGGTGC...GCCCACTGGGGGCGTCCTGGCGTAGAAACCCTGGCAGCCAGGTCTGCTCAAGAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR CCA 90 bp GGAGGTCAACATGGCCAGCGGGAGATGCGGCGGGCAAAGCAGCAGCGCACAGGAAGCGGGAGGTCAACATaGCCAGCGGGAGATGCGGCG +
Preference number: 4 (lower is better)
Translates to: GGQHGQREMRRAKQQRTGSGRST*PAGDAA
Trigger: CGCCGCATCTCCCGCTGGCCATGTTGACCTCCCGCT...TCCTGTGCGCTGCTGCTTTGCCCGCCGCATCTCCCGCTGGCCATGTTGACCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR CCA 90 bp TGCTCTGTCCGCCGTGGACCTGGAGGGTCCAGAGAGCGCCCGGCTTTTGTTTGGGCTCATCTCTGCCCCTaGCCACCGGTGACCCGGCCA +
Preference number: 4 (lower is better)
Translates to: CSVRRGPGGSRERPAFVWAHLCP*PPVTRP
Trigger: TGGCCGGGTCACCGGTGGCCAGGGGCAGAGATGAGC...CCAAACAAAAGCCGGGCGCTCTCTGGACCCTCCAGGTCCACGGCGGACAGAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR CCA 90 bp CCAGAGGCAGCCGGGCTGCCCGGAATGTGGTGTCATGGCTCCCCTAGGCCCAGGGGGCAAAGGGGTACATaGCCGAGACCTGCACCCTCT +
Preference number: 4 (lower is better)
Translates to: PEAAGLPGMWCHGSPRPRGQRGT*PRPAPS
Trigger: AGAGGGTGCAGGTCTCGGCCATGTACCCCTTTGCCC...CCTGGGCCTAGGGGAGCCATGACACCACATTCCGGGCAGCCCGGCTGCCTCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR CCA 90 bp GGGAGGAGTCATCTTGAGCAGACCTGGCTGCCAGGGTTTCTACGCCAGGACGCCGAGGCGGTGGAGGCCTaGGGGCCACCATGCCAGTGC +
Preference number: 4 (lower is better)
Translates to: GRSHLEQTWLPGFLRQDAEAVEA*GPPCQC
Trigger: GCACTGGCATGGTGGCCCCCAGGCCTCCACCGCCTC...GGCGTCCTGGCGTAGAAACCCTGGCAGCCAGGTCTGCTCAAGATGACTCCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR CCA 90 bp GTGCACCGACCGGGAGCACACGTGGGGGTTAGTGGTGGTTTAAATGGCCGCGGAGAGGCGGTGGAGGCCTaGGGGCCACCATGCCAGTGC +
Preference number: 4 (lower is better)
Translates to: VHRPGAHVGVSGGLNGRGEAVEA*GPPCQC
Trigger: GCACTGGCATGGTGGCCCCCAGGCCTCCACCGCCTC...TCCGCGGCCATTTAAACCACCACTAACCCCCACGTGTGCTCCCGGTCGGTGCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR CAA 72 bp GAGGCCTGGGGGCCACCATGCCAGTGCCTGGCTGATTaGCTGCATGGACCCGCTTCCTGGGGTGAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: EAWGPPCQCLAD*LHGPASWGEAL
Trigger: CAGAGCCTCACCCCAGGAAGCGGGTCCATGCAGCAAATCAGCCAGGCACTGGCATGGTGGCCCCCAGGCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR TCA 90 bp CCCCCACCCCGCGGCCTCCGTGGGACGGGAGAGTCTGCGCAGGACGGCACCGAGGCATTCCATAGAAATTaGCAGAAAAGCACCTGGCCG +
Preference number: 4 (lower is better)
Translates to: PPPRGLRGTGESAQDGTEAFHRN*QKSTWP
Trigger: CGGCCAGGTGCTTTTCTGTCAATTTCTATGGAATGC...CTCGGTGCCGTCCTGCGCAGACTCTCCCGTCCCACGGAGGCCGCGGGGTGGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264202.8
ENST00000264203.7
ENST00000375142.5
CDS-3UTR GCA 90 bp GCGGCCTCCGTGGGACGGGAGAGTCTGCGCAGGACGGCACCGAGGGCCACCTCTCTCCGAGGTTCATGGTaGCAGAGCCAGATTTGTTGG +
Preference number: 4 (lower is better)
Translates to: AASVGRESLRRTAPRATSLRGSW*QSQICW
Trigger: CCAACAAATCTGGCTCTGGCACCATGAACCTCGGAG...AGAGGTGGCCCTCGGTGCCGTCCTGCGCAGACTCTCCCGTCCCACGGAGGCCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264202.8
ENST00000264203.7
ENST00000375142.5
CDS-3UTR GCA 90 bp GCGAGGTGTGGCAGAAGCAGGCTCGGAGCCGGAGGAGGGTGGCTATCGGCTTTAACCGAGGGCCACCTCTaGTCCCAGAGCTGTCCCCTG +
Preference number: 4 (lower is better)
Translates to: ARCGRSRLGAGGGWLSALTEGHL*SQSCPL
Trigger: CAGGGGACAGCTCTGGGAGCAGAGGTGGCCCTCGGT...TAAAGCCGATAGCCACCCTCCTCCGGCTCCGAGCCTGCTTCTGCCACACCTCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264202.8
ENST00000264203.7
ENST00000375142.5
CDS-3UTR GCA 90 bp CGAGGTGTGGCAGAAGCAGGCTCGGAGCCGGAGGAGGGTGGCTATCGGCTTTATTGGGACGGGAGAGTCTaGGCAGGACGGCACCGAGGG +
Preference number: 4 (lower is better)
Translates to: RGVAEAGSEPEEGGYRLYWDGRV*AGRHRG
Trigger: CCCTCGGTGCCGTCCTGCGCAGACTCTCCCGTCCCA...ATAAAGCCGATAGCCACCCTCCTCCGGCTCCGAGCCTGCTTCTGCCACACCTCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264202.8
ENST00000264203.7
ENST00000375142.5
CDS-3UTR GCA 90 bp GGCGCTGTGCGGTCAATGATGCAGCTGTTATGTGACCTGTCGGGGAGGGAAGGGCCCGGGACTGCAGCCTaGCTCTCCTCTGGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: GAVRSMMQLLCDLSGREGPGTAA*LSSGLG
Trigger: GCCCAGCCCAGAGGAGAGGCAGGCTGCAGTCCCGGG...CCCTTCCCTCCCCGACAGGTCACATAACAGCTGCATCATTGACCGCACAGCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR GCA 90 bp CTGGCTGCCAGGGTTTCTACGCCAGGACGCCCCCAGTGGGCGGCCAGGGAACTGCACACAAGTGGCTGCTaGTGGAGAGGCAGCATCCGT +
Preference number: 4 (lower is better)
Translates to: LAARVSTPGRPQWAARELHTSGC*WRGSIR
Trigger: ACGGATGCTGCCTCTCCAGCAGCAGCCACTTGTGTG...CAGTTCCCTGGCCGCCCACTGGGGGCGTCCTGGCGTAGAAACCCTGGCAGCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR GCA 90 bp GAGGTCCACGCTGGCGGTGGTCGTGGTATTCAGGGGCTCGCCACCACCACCCGCAGCGCTTGGAGACAGTaGTCGACTCTGTGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: EVHAGGGRGIQGLATTTRSAWRQ*STLWEG
Trigger: TCCCTCCCACAGAGTCGAGCACTGTCTCCAAGCGCT...GCGGGTGGTGGTGGCGAGCCCCTGAATACCACGACCACCGCCAGCGTGGACCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR GCA 90 bp GGCCAAAGGCATCAGCCCCCACGGCCCCCAGGCTCCAAATCTCAGCCGATTCCCGAGACCTGCACCCTCTaGACCTTGCCAGGCCCTGTG +
Preference number: 4 (lower is better)
Translates to: GQRHQPPRPPGSKSQPIPETCTL*TLPGPV
Trigger: CACAGGGCCTGGCAAGGTGCAGAGGGTGCAGGTCTC...GGGAATCGGCTGAGATTTGGAGCCTGGGGGCCGTGGGGGCTGATGCCTTTGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR CCA 90 bp GTGTGGCAGAAGCAGGCTCGGAGCCGGAGGAGGGTGGCTATCGGCTTTATTCTCGCTGCTGATCACTCATaGTGGCGGCGGCGGCGGCGG +
Preference number: 4 (lower is better)
Translates to: VWQKQARSRRRVAIGFILAADHS*WRRRRR
Trigger: CCGCCGCCGCCGCCGCCACCATGAGTGATCAGCAGC...GAGAATAAAGCCGATAGCCACCCTCCTCCGGCTCCGAGCCTGCTTCTGCCACAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264202.8
ENST00000375142.5
ENST00000375144.6
ENST00000674432.1
ENST00000674449.1
CDS-3UTR CCA 90 bp AGCGAGGTGTGGCAGAAGCAGGCTCGGAGCCGGAGGAGGGTGGCTATCGGCTTTGCCGAGCTGACGGCATaGCCCCATCCTCCAAGGGAG +
Preference number: 4 (lower is better)
Translates to: SEVWQKQARSRRRVAIGFAELTA*PHPPRE
Trigger: CTCCCTTGGAGGATGGGGCCATGCCGTCAGCTCGGC...AAAGCCGATAGCCACCCTCCTCCGGCTCCGAGCCTGCTTCTGCCACACCTCGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264202.8
ENST00000264203.7
ENST00000375142.5
ENST00000375144.6
ENST00000674449.1
CDS-3UTR CCA 90 bp GCGGCCTCCGTGGGACGGGAGAGTCTGCGCAGGACGGCACCGAGGGCCACCTCTGCCACAGCATCACCGTaGAGGTCAACTTGTAATGGG +
Preference number: 4 (lower is better)
Translates to: AASVGRESLRRTAPRATSATASP*RSTCNG
Trigger: CCCATTACAAGTTGACCTCCACGGTGATGCTGTGGC...AGAGGTGGCCCTCGGTGCCGTCCTGCGCAGACTCTCCCGTCCCACGGAGGCCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264202.8
ENST00000264203.7
ENST00000375142.5
CDS-3UTR CCA 90 bp CGTGGGACGGGAGAGTCTGCGCAGGACGGCACCGAGGGCCACCTCTGCTCCCAGGGAGCCGGAGGAGGGTaGCTATCGGCTTTATTCTCA +
Preference number: 4 (lower is better)
Translates to: RGTGESAQDGTEGHLCSQGAGGG*LSALFS
Trigger: TGAGAATAAAGCCGATAGCCACCCTCCTCCGGCTCC...CTGGGAGCAGAGGTGGCCCTCGGTGCCGTCCTGCGCAGACTCTCCCGTCCCACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264202.8
ENST00000264203.7
ENST00000375142.5
CDS-3UTR CCA 90 bp CTTCCCAGGACTGTCCCTGGCTCTGCGGCGGCCAAAGGCATCAGCCCCCACGGCACGAGGTGGGAAGGATaGTGCAGGACACTGGCCACT +
Preference number: 4 (lower is better)
Translates to: LPRTVPGSAAAKGISPHGTRWEG*CRTLAT
Trigger: AGTGGCCAGTGTCCTGCACCATCCTTCCCACCTCGT...GCCGTGGGGGCTGATGCCTTTGGCCGCCGCAGAGCCAGGGACAGTCCTGGGAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR CCA 90 bp CGGCGGCCAAAGGCATCAGCCCCCACGGCCCCCAGGCTCCAAATCTCAGCCGATGCCTCTCCTCTGGGCTaGGCTGTGAGAGCTACACCA +
Preference number: 4 (lower is better)
Translates to: RRPKASAPTAPRLQISADASPLG*AVRATP
Trigger: TGGTGTAGCTCTCACAGCCCAGCCCAGAGGAGAGGC...ATCGGCTGAGATTTGGAGCCTGGGGGCCGTGGGGGCTGATGCCTTTGGCCGCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR CCA 90 bp GGAGGTCAACATGGCCAGCGGGAGATGCGGCGGGCAAAGCAGCAGCGCACAGGAGGTCCACGCTGGCGGTaGTCGTGGTATTCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: GGQHGQREMRRAKQQRTGGPRWR*SWYSGA
Trigger: AGCCCCTGAATACCACGACCACCGCCAGCGTGGACC...TCCTGTGCGCTGCTGCTTTGCCCGCCGCATCTCCCGCTGGCCATGTTGACCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR CCA 90 bp GGAGGTCAACATGGCCAGCGGGAGATGCGGCGGGCAAAGCAGCAGCGCACAGGAGGCTACACGGGAATGTaGCTGTGCACCGACCGGGAG +
Preference number: 4 (lower is better)
Translates to: GGQHGQREMRRAKQQRTGGYTGM*LCTDRE
Trigger: CTCCCGGTCGGTGCACAGCCACATTCCCGTGTAGCC...TCCTGTGCGCTGCTGCTTTGCCCGCCGCATCTCCCGCTGGCCATGTTGACCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR CCA 90 bp CCTGTCACAGGTCACGAAGACCAAGCCTCCCCCAGGTGGGCAGGGGATCAGAAGCGCAGCCCCTGGACCTaGGCTCTGCAGCCCCAGTTG +
Preference number: 4 (lower is better)
Translates to: PVTGHEDQASPRWAGDQKRSPWT*ALQPQL
Trigger: CAACTGGGGCTGCAGAGCCCAGGTCCAGGGGCTGCG...CTTCTGATCCCCTGCCCACCTGGGGGAGGCTTGGTCTTCGTGACCTGTGACAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR CCA 90 bp CTGATTTGCTGCATGGACCCGCTTCCTGGGGTGAGGCTCTGGGTCACTGGGCTGCCCTGGGTTGCTGGCTaGGGACTCAGGCCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: LICCMDPLPGVRLWVTGLPWVAG*GLRPGA
Trigger: AGCCCCTGGCCTGAGTCCCCAGCCAGCAACCCAGGG...CAGCCCAGTGACCCAGAGCCTCACCCCAGGAAGCGGGTCCATGCAGCAAATCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR CCA 90 bp GAGGTCCACGCTGGCGGTGGTCGTGGTATTCAGGGGCTCGCCACCACCACCCGCTCAGAACAGCTACCCTaGGTTGCTGGCTGGGGACTC +
Preference number: 4 (lower is better)
Translates to: EVHAGGGRGIQGLATTTRSEQLP*VAGWGL
Trigger: GAGTCCCCAGCCAGCAACCCAGGGTAGCTGTTCTGA...GCGGGTGGTGGTGGCGAGCCCCTGAATACCACGACCACCGCCAGCGTGGACCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR CCA 90 bp CTGATTTGCTGCATGGACCCGCTTCCTGGGGTGAGGCTCTGGGTCACTGGGCTGGCTCATCTCTGCCCCTaGCCACCGGTGACCCGGCCA +
Preference number: 4 (lower is better)
Translates to: LICCMDPLPGVRLWVTGLAHLCP*PPVTRP
Trigger: TGGCCGGGTCACCGGTGGCCAGGGGCAGAGATGAGC...CAGCCCAGTGACCCAGAGCCTCACCCCAGGAAGCGGGTCCATGCAGCAAATCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR CCA 90 bp ATCTTGAGCAGACCTGGCTGCCAGGGTTTCTACGCCAGGACGCCCCCAGTGGGCGAGGCTCTGGGTCACTaGGCTGGGCATCTGCCCCTC +
Preference number: 4 (lower is better)
Translates to: ILSRPGCQGFYARTPPVGEALGH*AGHLPL
Trigger: GAGGGGCAGATGCCCAGCCCAGTGACCCAGAGCCTC...GCCCACTGGGGGCGTCCTGGCGTAGAAACCCTGGCAGCCAGGTCTGCTCAAGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR CCA 90 bp CGGCGGGTTGGTGAGTCCTGTTTTAGTGGGGAGGGTCTCGCGGCTCTCAGGCAGCCTGGGGTGAGGCTCTaGGTCACTGGGCTGGGCATC +
Preference number: 4 (lower is better)
Translates to: RRVGESCFSGEGLAALRQPGVRL*VTGLGI
Trigger: GATGCCCAGCCCAGTGACCCAGAGCCTCACCCCAGG...CTGCCTGAGAGCCGCGAGACCCTCCCCACTAAAACAGGACTCACCAACCCGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR CCA 90 bp GTGTTACATGGGGCCGAGGCTACACGGGAATGTGGCTGTGCACCGACCGGGAGCCCTGGGGTGAGGCTCTaGGTCACTGGGCTGGGCATC +
Preference number: 4 (lower is better)
Translates to: VLHGAEATRECGCAPTGSPGVRL*VTGLGI
Trigger: GATGCCCAGCCCAGTGACCCAGAGCCTCACCCCAGG...GCTCCCGGTCGGTGCACAGCCACATTCCCGTGTAGCCTCGGCCCCATGTAACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR CCA 90 bp ATCTTCCCAGGACTGTCCCTGGCTCTGCGGCGGCCAAAGGCATCAGCCCCCACGCATGGACCCGCTTCCTaGGGTGAGGCTCTGGGTCAC +
Preference number: 4 (lower is better)
Translates to: IFPGLSLALRRPKASAPTHGPAS*GEALGH
Trigger: GTGACCCAGAGCCTCACCCCAGGAAGCGGGTCCATG...CGTGGGGGCTGATGCCTTTGGCCGCCGCAGAGCCAGGGACAGTCCTGGGAAGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR CCA 90 bp ATATGGCTTACATGGACAGGTGCTCATCTCTGCCCCTGGCCACCGGTGACCCGGGAGGCGGTGGAGGCCTaGGGGCCACCATGCCAGTGC +
Preference number: 4 (lower is better)
Translates to: IWLTWTGAHLCPWPPVTREAVEA*GPPCQC
Trigger: GCACTGGCATGGTGGCCCCCAGGCCTCCACCGCCTC...CCGGGTCACCGGTGGCCAGGGGCAGAGATGAGCACCTGTCCATGTAAGCCATAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR CAA 72 bp CAGCTGCAGCTCGTTAGGGGCGGAAGGTTATGCTGGTaGTGGCCGAGTCGGCACTGGGCGTCCAGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: QLQLVRGGRLCW*WPSRHWASRQL
Trigger: GAGCTGCCTGGACGCCCAGTGCCGACTCGGCCACAACCAGCATAACCTTCCGCCCCTAACGAGCTGCAGCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR TCA 90 bp GCGGCCTCCGTGGGACGGGAGAGTCTGCGCAGGACGGCACCGAGGGCCACCTCTCTCCAGCCTTCTTTATaGGGATCACTCCAGCAAAGC +
Preference number: 4 (lower is better)
Translates to: AASVGRESLRRTAPRATSLQPSL*GSLQQS
Trigger: GCTTTGCTGGAGTGATCCTCATAAAGAAGGCTGGAG...AGAGGTGGCCCTCGGTGCCGTCCTGCGCAGACTCTCCCGTCCCACGGAGGCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264202.8
ENST00000264203.7
ENST00000375142.5
CDS-3UTR TCA 90 bp CCCCCACCCCGCGGCCTCCGTGGGACGGGAGAGTCTGCGCAGGACGGCACCGAGCGTGTCTGGTTAGCATaGAACAGAGGTTTAGCATTG +
Preference number: 4 (lower is better)
Translates to: PPPRGLRGTGESAQDGTERVWLA*NRGLAL
Trigger: CAATGCTAAACCTCTGTTTCATGCTAACCAGACACG...CTCGGTGCCGTCCTGCGCAGACTCTCCCGTCCCACGGAGGCCGCGGGGTGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264202.8
ENST00000264203.7
ENST00000375142.5
CDS-3UTR TCA 90 bp AGAGCGAGGTGTGGCAGAAGCAGGCTCGGAGCCGGAGGAGGGTGGCTATCGGCTCGCTGGGTCAGCACTTaGGAGAGCTCCCTCTGCAAC +
Preference number: 4 (lower is better)
Translates to: RARCGRSRLGAGGGWLSARWVST*ESSLCN
Trigger: GTTGCAGAGGGAGCTCTCTCAAGTGCTGACCCAGCG...AGCCGATAGCCACCCTCCTCCGGCTCCGAGCCTGCTTCTGCCACACCTCGCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375142.5
ENST00000375144.6
CDS-3UTR TCA 90 bp GCTGATTTGCTGCATGGACCCGCTTCCTGGGGTGAGGCTCTGGGTCACTGGGCTGACAAACTGCAGGGCTaGGGAGGCTCCGGGGGCAAG +
Preference number: 4 (lower is better)
Translates to: ADLLHGPASWGEALGHWADKLQG*GGSGGK
Trigger: CTTGCCCCCGGAGCCTCCTCAGCCCTGCAGTTTGTC...AGCCCAGTGACCCAGAGCCTCACCCCAGGAAGCGGGTCCATGCAGCAAATCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR TCA 90 bp GGCCAAAGGCATCAGCCCCCACGGCCCCCAGGCTCCAAATCTCAGCCGATTCCCATGCCAGTGCCTGGCTaGTTTGCTGCATGGACCCGC +
Preference number: 4 (lower is better)
Translates to: GQRHQPPRPPGSKSQPIPMPVPG*FAAWTR
Trigger: GCGGGTCCATGCAGCAAATCAGCCAGGCACTGGCAT...GGGAATCGGCTGAGATTTGGAGCCTGGGGGCCGTGGGGGCTGATGCCTTTGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR GCA 90 bp CGTGGGACGGGAGAGTCTGCGCAGGACGGCACCGAGGGCCACCTCTGCTCCCAGACTTGTAATGGGCGGTaGGACCGCTGGATTTCTCCT +
Preference number: 4 (lower is better)
Translates to: RGTGESAQDGTEGHLCSQTCNGR*DRWISP
Trigger: AGGAGAAATCCAGCGGTCGCACCGCCCATTACAAGT...CTGGGAGCAGAGGTGGCCCTCGGTGCCGTCCTGCGCAGACTCTCCCGTCCCACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264202.8
ENST00000264203.7
ENST00000375142.5
CDS-3UTR GCA 90 bp CGTGGGACGGGAGAGTCTGCGCAGGACGGCACCGAGGGCCACCTCTGCTCCCAGCCAGATTTGTTGGTCTaGAGCCACAGCATCACCGTG +
Preference number: 4 (lower is better)
Translates to: RGTGESAQDGTEGHLCSQPDLLV*SHSITV
Trigger: CACGGTGATGCTGTGGCTGCAGACCAACAAATCTGG...CTGGGAGCAGAGGTGGCCCTCGGTGCCGTCCTGCGCAGACTCTCCCGTCCCACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264202.8
ENST00000264203.7
ENST00000375142.5
CDS-3UTR GCA 90 bp GGCGCTGTGCGGTCAATGATGCAGCTGTTATGTGACCTGTCGGGGAGGGAAGGGGCTGAGGGCCCTGCCTaGATGTGGCGTCAGGGAGGC +
Preference number: 4 (lower is better)
Translates to: GAVRSMMQLLCDLSGREGAEGPA*MWRQGG
Trigger: GCCTCCCTGACGCCACATGCAGGCAGGGCCCTCAGC...CCCTTCCCTCCCCGACAGGTCACATAACAGCTGCATCATTGACCGCACAGCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR GCA 90 bp GCTGATTTGCTGCATGGACCCGCTTCCTGGGGTGAGGCTCTGGGTCACTGGGCTATGGCCAGCGGGAGATaGGGCGGGCAAAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: ADLLHGPASWGEALGHWAMASGR*GGQSSS
Trigger: GCTGCTGCTTTGCCCGCCGCATCTCCCGCTGGCCAT...AGCCCAGTGACCCAGAGCCTCACCCCAGGAAGCGGGTCCATGCAGCAAATCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR GCA 90 bp ATCTTGAGCAGACCTGGCTGCCAGGGTTTCTACGCCAGGACGCCCCCAGTGGGCTCCCCAGGGGCTTCTTaGCAAGCTCACAGCGGGAGG +
Preference number: 4 (lower is better)
Translates to: ILSRPGCQGFYARTPPVGSPGAS*QAHSGR
Trigger: CCTCCCGCTGTGAGCTTGGCAAGAAGCCCCTGGGGA...GCCCACTGGGGGCGTCCTGGCGTAGAAACCCTGGCAGCCAGGTCTGCTCAAGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR GCA 90 bp ATCTTCCCAGGACTGTCCCTGGCTCTGCGGCGGCCAAAGGCATCAGCCCCCACGCACAGGACAGCCAAGTaGCCCTGGGATCCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: IFPGLSLALRRPKASAPTHRTAK*PWDPCC
Trigger: ACAGCAGGGATCCCAGGGGCACTTGGCTGTCCTGTG...CGTGGGGGCTGATGCCTTTGGCCGCCGCAGAGCCAGGGACAGTCCTGGGAAGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR CCA 90 bp AGGTCACCCCTTCCAAGCCAGCTAGCCCTGGACAGGCAATGTGCCGCTGAGCAGGCCGAGCTGACGGCATaGCCCCATCCTCCAAGGGAG +
Preference number: 4 (lower is better)
Translates to: RSPLPSQLALDRQCAAEQAELTA*PHPPRE
Trigger: CTCCCTTGGAGGATGGGGCCATGCCGTCAGCTCGGC...CTGCTCAGCGGCACATTGCCTGTCCAGGGCTAGCTGGCTTGGAAGGGGTGACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR CCA 90 bp GCGGCCTCCGTGGGACGGGAGAGTCTGCGCAGGACGGCACCGAGGGCCACCTCTGGTCAAAGGCATTGTTaGCTTCCACCTCCAGCTTTC +
Preference number: 4 (lower is better)
Translates to: AASVGRESLRRTAPRATSGQRHC*LPPPAF
Trigger: GAAAGCTGGAGGTGGAAGCCAACAATGCCTTTGACC...AGAGGTGGCCCTCGGTGCCGTCCTGCGCAGACTCTCCCGTCCCACGGAGGCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264202.8
ENST00000264203.7
ENST00000375142.5
CDS-3UTR CCA 90 bp GCGGCCTCCGTGGGACGGGAGAGTCTGCGCAGGACGGCACCGAGGGCCACCTCTGATGTTGGCTATGTGTaGGGAGCAGTCACTCACAGT +
Preference number: 4 (lower is better)
Translates to: AASVGRESLRRTAPRATSDVGYV*GAVTHS
Trigger: ACTGTGAGTGACTGCTCCCCACACATAGCCAACATC...AGAGGTGGCCCTCGGTGCCGTCCTGCGCAGACTCTCCCGTCCCACGGAGGCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264202.8
ENST00000264203.7
ENST00000375142.5
CDS-3UTR CCA 90 bp AGAGCGAGGTGTGGCAGAAGCAGGCTCGGAGCCGGAGGAGGGTGGCTATCGGCTCCAGGCGCCCGATGTTaGCTATGTGTGGGGAGCAGT +
Preference number: 4 (lower is better)
Translates to: RARCGRSRLGAGGGWLSAPGARC*LCVGSS
Trigger: ACTGCTCCCCACACATAGCCAACATCGGGCGCCTGG...AGCCGATAGCCACCCTCCTCCGGCTCCGAGCCTGCTTCTGCCACACCTCGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264202.8
ENST00000264203.7
ENST00000375142.5
ENST00000375144.6
ENST00000674449.1
CDS-3UTR CCA 90 bp GCTGTGCGGTCAATGATGCAGCTGTTATGTGACCTGTCGGGGAGGGAAGGGACGACCCCGCGGCCTCCGTaGGACGGGAGAGTCTGCGCA +
Preference number: 4 (lower is better)
Translates to: AVRSMMQLLCDLSGREGTTPRPP*DGRVCA
Trigger: TGCGCAGACTCTCCCGTCCCACGGAGGCCGCGGGGT...CGTCCCTTCCCTCCCCGACAGGTCACATAACAGCTGCATCATTGACCGCACAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264202.8
ENST00000264203.7
ENST00000375142.5
CDS-3UTR CCA 90 bp AGAGCGAGGTGTGGCAGAAGCAGGCTCGGAGCCGGAGGAGGGTGGCTATCGGCTTCACATCTTCTGGGCTaGCCAAGGCCTGGGCGAGAG +
Preference number: 4 (lower is better)
Translates to: RARCGRSRLGAGGGWLSASHLLG*PRPGRE
Trigger: CTCTCGCCCAGGCCTTGGCCAGCCCAGAAGATGTGA...AGCCGATAGCCACCCTCCTCCGGCTCCGAGCCTGCTTCTGCCACACCTCGCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264203.7
CDS-3UTR CCA 90 bp TGCTCTGTCCGCCGTGGACCTGGAGGGTCCAGAGAGCGCCCGGCTTTTGTTTGGCTGGCAGCAGAGCCCTaGCAGAGGACGTCAGAGAGG +
Preference number: 4 (lower is better)
Translates to: CSVRRGPGGSRERPAFVWLAAEP*QRTSER
Trigger: CCTCTCTGACGTCCTCTGCCAGGGCTCTGCTGCCAG...CCAAACAAAAGCCGGGCGCTCTCTGGACCCTCCAGGTCCACGGCGGACAGAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR CCA 90 bp ATCTTCCCAGGACTGTCCCTGGCTCTGCGGCGGCCAAAGGCATCAGCCCCCACGTGGTGTATCGGGCAGTaGCTGCCAGTGGCAGGCCTA +
Preference number: 4 (lower is better)
Translates to: IFPGLSLALRRPKASAPTWCIGQ*LPVAGL
Trigger: TAGGCCTGCCACTGGCAGCCACTGCCCGATACACCA...CGTGGGGGCTGATGCCTTTGGCCGCCGCAGAGCCAGGGACAGTCCTGGGAAGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR CCA 90 bp GCCTGGGGACTGTGCAGGTTGGCTGGGCGGGAAAGTGTGTTTGGTGTATCGGGCCGCTGGCGGTGGTCGTaGTATTCAGGGGCTCGCCAC +
Preference number: 4 (lower is better)
Translates to: AWGLCRLAGRESVFGVSGRWRWS*YSGARH
Trigger: GTGGCGAGCCCCTGAATACCACGACCACCGCCAGCG...GCCCGATACACCAAACACACTTTCCCGCCCAGCCAACCTGCACAGTCCCCAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR CCA 90 bp GTGCACCGACCGGGAGCACACGTGGGGGTTAGTGGTGGTTTAAATGGCCGCGGAGGCGGCTCTGGGGTGTaGAGTGGTATCGCCGCTGCA +
Preference number: 4 (lower is better)
Translates to: VHRPGAHVGVSGGLNGRGGGSGV*SGIAAA
Trigger: TGCAGCGGCGATACCACTCCACACCCCAGAGCCGCC...TCCGCGGCCATTTAAACCACCACTAACCCCCACGTGTGCTCCCGGTCGGTGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR CCA 90 bp TGCTCTGTCCGCCGTGGACCTGGAGGGTCCAGAGAGCGCCCGGCTTTTGTTTGGCTCCAGCAGAGCATCTaGGCCAGCCAGGGTGGAGTC +
Preference number: 4 (lower is better)
Translates to: CSVRRGPGGSRERPAFVWLQQSI*ASQGGV
Trigger: GACTCCACCCTGGCTGGCCCAGATGCTCTGCTGGAG...CCAAACAAAAGCCGGGCGCTCTCTGGACCCTCCAGGTCCACGGCGGACAGAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR CCA 90 bp GCAGCCGGGCTGCCCGGAATGTGGTGTCATGGCTCCCCTAGGCCCAGGCTGGAGCTCTGCAGCCCCAGTTaGCAGGGTTCCAAATGCCTT +
Preference number: 4 (lower is better)
Translates to: AAGLPGMWCHGSPRPRLELCSPS*QGSKCL
Trigger: AAGGCATTTGGAACCCTGCCAACTGGGGCTGCAGAG...CTCCAGCCTGGGCCTAGGGGAGCCATGACACCACATTCCGGGCAGCCCGGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR CCA 90 bp GGGAGGAGTCATCTTGAGCAGACCTGGCTGCCAGGGTTTCTACGCCAGGACGCCCTGCTGCACCCCTTCTaGGGTGGGCCTTCAGTGCGC +
Preference number: 4 (lower is better)
Translates to: GRSHLEQTWLPGFLRQDALLHPF*GGPSVR
Trigger: GCGCACTGAAGGCCCACCCCAGAAGGGGTGCAGCAG...GGCGTCCTGGCGTAGAAACCCTGGCAGCCAGGTCTGCTCAAGATGACTCCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR CCA 90 bp GAGTGGGTAGAGGGCTGCTCAAGAAGAGTGCTACGGAGAGTGCACTCAGCCGGACCAGGACGCCCCCAGTaGGCGGCCAGGGAACTGCAC +
Preference number: 4 (lower is better)
Translates to: EWVEGCSRRVLRRVHSAGPGRPQ*AARELH
Trigger: GTGCAGTTCCCTGGCCGCCCACTGGGGGCGTCCTGG...TCCGGCTGAGTGCACTCTCCGTAGCACTCTTCTTGAGCAGCCCTCTACCCACTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR CCA 90 bp GGGAGGAGTCATCTTGAGCAGACCTGGCTGCCAGGGTTTCTACGCCAGGACGCCGCTACCCTGGGTTGCTaGCTGGGGACTCAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: GRSHLEQTWLPGFLRQDAATLGC*LGTQAR
Trigger: CCTGGCCTGAGTCCCCAGCCAGCAACCCAGGGTAGC...GGCGTCCTGGCGTAGAAACCCTGGCAGCCAGGTCTGCTCAAGATGACTCCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR CCA 90 bp AGGTCACCCCTTCCAAGCCAGCTAGCCCTGGACAGGCAATGTGCCGCTGAGCAGCCTGGGGTGAGGCTCTaGGTCACTGGGCTGGGCATC +
Preference number: 4 (lower is better)
Translates to: RSPLPSQLALDRQCAAEQPGVRL*VTGLGI
Trigger: GATGCCCAGCCCAGTGACCCAGAGCCTCACCCCAGG...CTGCTCAGCGGCACATTGCCTGTCCAGGGCTAGCTGGCTTGGAAGGGGTGACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR CCA 90 bp GTGTGGCAGAAGCAGGCTCGGAGCCGGAGGAGGGTGGCTATCGGCTTTATTCTCGGACTGGTGAGGCGGTaGAGGCCTGGGGGCCACCAT +
Preference number: 4 (lower is better)
Translates to: VWQKQARSRRRVAIGFILGLVRR*RPGGHH
Trigger: ATGGTGGCCCCCAGGCCTCCACCGCCTCACCAGTCC...GAGAATAAAGCCGATAGCCACCCTCCTCCGGCTCCGAGCCTGCTTCTGCCACAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674432.1
CDS-3UTR CCA 90 bp GCTGTGCGGTCAATGATGCAGCTGTTATGTGACCTGTCGGGGAGGGAAGGGACGCAGCGCGCTGCCTTCTaGGCACACCGATGCCCGCCC +
Preference number: 4 (lower is better)
Translates to: AVRSMMQLLCDLSGREGTQRAAF*AHRCPP
Trigger: GGGCGGGCATCGGTGTGCCCAGAAGGCAGCGCGCTG...CGTCCCTTCCCTCCCCGACAGGTCACATAACAGCTGCATCATTGACCGCACAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433834.5
3UTR CAA 72 bp GGGGACTGTGCAGGTTGGCTGGGCGGGAAAGTGTGTTaGGTGTATCGGGCAGTGGCTGCCAGTGGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: GDCAGWLGGKVC*VYRAVAASGRP
Trigger: AGGCCTGCCACTGGCAGCCACTGCCCGATACACCAAACACACTTTCCCGCCCAGCCAACCTGCACAGTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR TCA 90 bp GCGGCCTCCGTGGGACGGGAGAGTCTGCGCAGGACGGCACCGAGGGCCACCTCTCCAGAGGTAGACAGATaGGACGCCACCTTCAAAATA +
Preference number: 4 (lower is better)
Translates to: AASVGRESLRRTAPRATSPEVDR*DATFKI
Trigger: TATTTTGAAGGTGGCGTCTCATCTGTCTACCTCTGG...AGAGGTGGCCCTCGGTGCCGTCCTGCGCAGACTCTCCCGTCCCACGGAGGCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264202.8
ENST00000264203.7
ENST00000375142.5
CDS-3UTR TCA 90 bp CGGCGGCCAAAGGCATCAGCCCCCACGGCCCCCAGGCTCCAAATCTCAGCCGATGCGCTGTGCGGTCAATaGTGCAGCTGTTATGTGACC +
Preference number: 4 (lower is better)
Translates to: RRPKASAPTAPRLQISADALCGQ*CSCYVT
Trigger: GGTCACATAACAGCTGCATCATTGACCGCACAGCGC...ATCGGCTGAGATTTGGAGCCTGGGGGCCGTGGGGGCTGATGCCTTTGGCCGCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR TCA 90 bp TCTCACAGGCCGGGGACACCAGCCACTTTCCTGGCCCCTCAGGCAGCAGCTCAGCTAGAAAACCGAGTGTaGCCCTGGCCAATGCCCCTC +
Preference number: 4 (lower is better)
Translates to: SHRPGTPATFLAPQAAAQLENRV*PWPMPL
Trigger: GAGGGGCATTGGCCAGGGTCACACTCGGTTTTCTAG...CTGAGCTGCTGCCTGAGGGGCCAGGAAAGTGGCTGGTGTCCCCGGCCTGTGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000674278.1
CDS-3UTR GCA 90 bp CTGGATGTAGATCTGGCGCTGGGTCAGCACTTGAGAGAGCTCCCTCTGCAACTGCCCGGGACTGCAGCCTaGCTCTCCTCTGGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: LDVDLALGQHLRELPLQLPGTAA*LSSGLG
Trigger: GCCCAGCCCAGAGGAGAGGCAGGCTGCAGTCCCGGG...CAGTTGCAGAGGGAGCTCTCTCAAGTGCTGACCCAGCGCCAGATCTACATCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR GCA 90 bp AGAGCGAGGTGTGGCAGAAGCAGGCTCGGAGCCGGAGGAGGGTGGCTATCGGCTCACACAAGTGGCTGCTaGTGGAGAGGCAGCATCCGT +
Preference number: 4 (lower is better)
Translates to: RARCGRSRLGAGGGWLSAHTSGC*WRGSIR
Trigger: ACGGATGCTGCCTCTCCAGCAGCAGCCACTTGTGTG...AGCCGATAGCCACCCTCCTCCGGCTCCGAGCCTGCTTCTGCCACACCTCGCTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375144.6
CDS-3UTR GCA 90 bp TCATGTCAGAGGCCTGCCTCCTGCTCTGTCCGCCGTGGACCTGGAGGGTCCAGAGGACAGTCAGGCCGGTaGACACAAGTGGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: SCQRPASCSVRRGPGGSRGQSGR*TQVAAA
Trigger: AGCAGCAGCCACTTGTGTGCACCGGCCTGACTGTCC...TCTGGACCCTCCAGGTCCACGGCGGACAGAGCAGGAGGCAGGCCTCTGACATGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR GCA 90 bp GCGAGGTGTGGCAGAAGCAGGCTCGGAGCCGGAGGAGGGTGGCTATCGGCTTTAAGGGGCGGAAGGTTATaGTGGTTGTGGCCGAGTCGG +
Preference number: 4 (lower is better)
Translates to: ARCGRSRLGAGGGWLSALRGGRL*WLWPSR
Trigger: CCGACTCGGCCACAACCAGCATAACCTTCCGCCCCT...TAAAGCCGATAGCCACCCTCCTCCGGCTCCGAGCCTGCTTCTGCCACACCTCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375144.6
CDS-3UTR GCA 90 bp CGGCGGCCAAAGGCATCAGCCCCCACGGCCCCCAGGCTCCAAATCTCAGCCGATACTCTCCAGGGATGCTaGCTCCTTCCCTACATCTGG +
Preference number: 4 (lower is better)
Translates to: RRPKASAPTAPRLQISADTLQGC*LLPYIW
Trigger: CCAGATGTAGGGAAGGAGGCAGCATCCCTGGAGAGT...ATCGGCTGAGATTTGGAGCCTGGGGGCCGTGGGGGCTGATGCCTTTGGCCGCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR GCA 90 bp AGGCCCTGTGGGGGTGGCATATGGCTTACATGGACAGGTGCTCATCTCTGCCCCCCTGGACCTGGGCTCTaGAGCCCCAGTTGGCAGGGT +
Preference number: 4 (lower is better)
Translates to: RPCGGGIWLTWTGAHLCPPGPGL*SPSWQG
Trigger: ACCCTGCCAACTGGGGCTGCAGAGCCCAGGTCCAGG...GGGGCAGAGATGAGCACCTGTCCATGTAAGCCATATGCCACCCCCACAGGGCCT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR GCA 90 bp CGGCGGGTTGGTGAGTCCTGTTTTAGTGGGGAGGGTCTCGCGGCTCTCAGGCAGCCTTGGAAAGTCTGCTaGACCCCTTCTGGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: RRVGESCFSGEGLAALRQPWKVC*TPSGVG
Trigger: GCCCACCCCAGAAGGGGTGCAGCAGACTTTCCAAGG...CTGCCTGAGAGCCGCGAGACCCTCCCCACTAAAACAGGACTCACCAACCCGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR GCA 90 bp CGAGGTGTGGCAGAAGCAGGCTCGGAGCCGGAGGAGGGTGGCTATCGGCTTTATACAGCTACCCTGGGTTaGTGGCTGGGGACTCAGGCC +
Preference number: 4 (lower is better)
Translates to: RGVAEAGSEPEEGGYRLYTATLG*WLGTQA
Trigger: GGCCTGAGTCCCCAGCCAGCAACCCAGGGTAGCTGT...ATAAAGCCGATAGCCACCCTCCTCCGGCTCCGAGCCTGCTTCTGCCACACCTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375144.6
CDS-3UTR GCA 90 bp TCTCACAGGCCGGGGACACCAGCCACTTTCCTGGCCCCTCAGGCAGCAGCTCAGCAGCTGACTCCCCTCTaGTCCAAAGCCACGGGGAAA +
Preference number: 4 (lower is better)
Translates to: SHRPGTPATFLAPQAAAQQLTPL*SKATGK
Trigger: TTTCCCCGTGGCTTTGGAGCAGAGGGGAGTCAGCTG...CTGAGCTGCTGCCTGAGGGGCCAGGAAAGTGGCTGGTGTCCCCGGCCTGTGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000674278.1
CDS-3UTR CCA 90 bp CGTGGGACGGGAGAGTCTGCGCAGGACGGCACCGAGGGCCACCTCTGCTCCCAGATTCTCAGGGAGAGATaGCGCTGTGCGGTCAATGAT +
Preference number: 4 (lower is better)
Translates to: RGTGESAQDGTEGHLCSQILRER*RCAVND
Trigger: ATCATTGACCGCACAGCGCCATCTCTCCCTGAGAAT...CTGGGAGCAGAGGTGGCCCTCGGTGCCGTCCTGCGCAGACTCTCCCGTCCCACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264202.8
ENST00000264203.7
ENST00000375142.5
CDS-3UTR CCA 90 bp GGCGCTGTGCGGTCAATGATGCAGCTGTTATGTGACCTGTCGGGGAGGGAAGGGAGTCACGGTCAGGCATaGAGCATGGTGGCGGCGGCG +
Preference number: 4 (lower is better)
Translates to: GAVRSMMQLLCDLSGREGSHGQA*SMVAAA
Trigger: CGCCGCCGCCACCATGCTCCATGCCTGACCGTGACT...CCCTTCCCTCCCCGACAGGTCACATAACAGCTGCATCATTGACCGCACAGCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264203.7
CDS-3UTR CCA 90 bp GGAAGGAAGAGCCAAGCCCGCCAGGTCTTGGCTGGATCACACGAAGGAGAAAGTGGCCCTGCCTGCATGTaGCGTCAGGGAGGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: GRKSQARQVLAGSHEGESGPACM*RQGGWG
Trigger: CCCCCAGCCTCCCTGACGCCACATGCAGGCAGGGCC...ACTTTCTCCTTCGTGTGATCCAGCCAAGACCTGGCGGGCTTGGCTCTTCCTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR CCA 90 bp GGGAGAGATGGCGCTGTGCGGTCAATGATGCAGCTGTTATGTGACCTGTCGGGGGGACGTCAGAGAGGCTaGGGCCCCCTGAGAACGCCC +
Preference number: 4 (lower is better)
Translates to: GRDGAVRSMMQLLCDLSGGRQRG*GPLRTP
Trigger: GGGCGTTCTCAGGGGGCCCCAGCCTCTCTGACGTCC...CCCCGACAGGTCACATAACAGCTGCATCATTGACCGCACAGCGCCATCTCTCCC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR CCA 90 bp TCCTGTTTTAGTGGGGAGGGTCTCGCGGCTCTCAGGCAGGGTACCTGGATCGGCCAGGACACTGGCCACTaGCAGCAGAGCCCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: SCFSGEGLAALRQGTWIGQDTGH*QQSPGR
Trigger: TCTGCCAGGGCTCTGCTGCCAGTGGCCAGTGTCCTG...GCCGATCCAGGTACCCTGCCTGAGAGCCGCGAGACCCTCCCCACTAAAACAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR CCA 90 bp GTGCACCGACCGGGAGCACACGTGGGGGTTAGTGGTGGTTTAAATGGCCGCGGACTGCTCTGTCCGCCGTaGACCTGGAGGGTCCAGAGA +
Preference number: 4 (lower is better)
Translates to: VHRPGAHVGVSGGLNGRGLLCPP*TWRVQR
Trigger: TCTCTGGACCCTCCAGGTCCACGGCGGACAGAGCAG...TCCGCGGCCATTTAAACCACCACTAACCCCCACGTGTGCTCCCGGTCGGTGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR CCA 90 bp GGGTCTCGGCGGGTTGGTGAGTCCTGTTTTAGTGGGGAGGGTCTCGCGGCTCTCTTCCCAGCCACTGCCTaGGGACTGTGCAGGTTGGCT +
Preference number: 4 (lower is better)
Translates to: GSRRVGESCFSGEGLAALFPATA*GLCRLA
Trigger: AGCCAACCTGCACAGTCCCCAGGCAGTGGCTGGGAA...GAGAGCCGCGAGACCCTCCCCACTAAAACAGGACTCACCAACCCGCCGAGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR CCA 90 bp GCTGATTTGCTGCATGGACCCGCTTCCTGGGGTGAGGCTCTGGGTCACTGGGCTATGCCGTGGCGGCTCTaGGGTGTGGAGTGGTATCGC +
Preference number: 4 (lower is better)
Translates to: ADLLHGPASWGEALGHWAMPWRL*GVEWYR
Trigger: GCGATACCACTCCACACCCCAGAGCCGCCACGGCAT...AGCCCAGTGACCCAGAGCCTCACCCCAGGAAGCGGGTCCATGCAGCAAATCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR CCA 90 bp CTGGCTGCCAGGGTTTCTACGCCAGGACGCCCCCAGTGGGCGGCCAGGGAACTGAGCCTCCACCCAGAGTaGAAAGCACACACACGTGAT +
Preference number: 4 (lower is better)
Translates to: LAARVSTPGRPQWAARELSLHPE*KAHTRD
Trigger: ATCACGTGTGTGTGCTTTCCACTCTGGGTGGAGGCT...CAGTTCCCTGGCCGCCCACTGGGGGCGTCCTGGCGTAGAAACCCTGGCAGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR CCA 90 bp ATCTTCCCAGGACTGTCCCTGGCTCTGCGGCGGCCAAAGGCATCAGCCCCCACGGCAGCATCCGTCCCTTaGCCTGGGCTTCTTCAGAAG +
Preference number: 4 (lower is better)
Translates to: IFPGLSLALRRPKASAPTAASVP*PGLLQK
Trigger: CTTCTGAAGAAGCCCAGGCCAAGGGACGGATGCTGC...CGTGGGGGCTGATGCCTTTGGCCGCCGCAGAGCCAGGGACAGTCCTGGGAAGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR CCA 90 bp GTGTTACATGGGGCCGAGGCTACACGGGAATGTGGCTGTGCACCGACCGGGAGCGCGGGGAGGCTTATGTaGCTTCTGGGATCCCTGCAC +
Preference number: 4 (lower is better)
Translates to: VLHGAEATRECGCAPTGSAGRLM*LLGSLH
Trigger: GTGCAGGGATCCCAGAAGCCACATAAGCCTCCCCGC...GCTCCCGGTCGGTGCACAGCCACATTCCCGTGTAGCCTCGGCCCCATGTAACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR CCA 90 bp GCAGCCGGGCTGCCCGGAATGTGGTGTCATGGCTCCCCTAGGCCCAGGCTGGAGACAGCCAAGTGCCCCTaGGATCCCTGCTGTCAAATT +
Preference number: 4 (lower is better)
Translates to: AAGLPGMWCHGSPRPRLETAKCP*DPCCQI
Trigger: AATTTGACAGCAGGGATCCCAGGGGCACTTGGCTGT...CTCCAGCCTGGGCCTAGGGGAGCCATGACACCACATTCCGGGCAGCCCGGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR CCA 90 bp CTGGCTGCCAGGGTTTCTACGCCAGGACGCCCCCAGTGGGCGGCCAGGGAACTGACAGCCAAGTGCCCCTaGGATCCCTGCTGTCAAATT +
Preference number: 4 (lower is better)
Translates to: LAARVSTPGRPQWAARELTAKCP*DPCCQI
Trigger: AATTTGACAGCAGGGATCCCAGGGGCACTTGGCTGT...CAGTTCCCTGGCCGCCCACTGGGGGCGTCCTGGCGTAGAAACCCTGGCAGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR CCA 90 bp GCAGCCGGGCTGCCCGGAATGTGGTGTCATGGCTCCCCTAGGCCCAGGCTGGAGTCCCACCCTTGGGAGTaGGTAAGAACCAGTGTCTCT +
Preference number: 4 (lower is better)
Translates to: AAGLPGMWCHGSPRPRLESHPWE*VRTSVS
Trigger: AGAGACACTGGTTCTTACCCACTCCCAAGGGTGGGA...CTCCAGCCTGGGCCTAGGGGAGCCATGACACCACATTCCGGGCAGCCCGGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR CCA 90 bp CCCTGTGGGGGTGGCATATGGCTTACATGGACAGGTGCTCATCTCTGCCCCTGGGAGGCTCTGGGTCACTaGGCTGGGCATCTGCCCCTC +
Preference number: 4 (lower is better)
Translates to: PCGGGIWLTWTGAHLCPWEALGH*AGHLPL
Trigger: GAGGGGCAGATGCCCAGCCCAGTGACCCAGAGCCTC...CCAGGGGCAGAGATGAGCACCTGTCCATGTAAGCCATATGCCACCCCCACAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR CCA 90 bp GGTAGTCGTCTTGGGTCCCAGGCCCAGTGCAGCTTCATCACCTGGGGGACAAAAGCCGGTGAAGGGAGCTaGTGCCTCTCAGGCCGTCCC +
Preference number: 4 (lower is better)
Translates to: GSRLGSQAQCSFITWGTKAGEGS*CLSGRP
Trigger: GGGACGGCCTGAGAGGCACCAGCTCCCTTCACCGGC...TTTTGTCCCCCAGGTGATGAAGCTGCACTGGGCCTGGGACCCAAGACGACTACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674449.1
CDS-3UTR TCA 90 bp GTGTGGCAGAAGCAGGCTCGGAGCCGGAGGAGGGTGGCTATCGGCTTTATTCTCGCACAGTCCAGCTGCTaGTCACTCATGGTGGCGGCG +
Preference number: 4 (lower is better)
Translates to: VWQKQARSRRRVAIGFILAQSSC*SLMVAA
Trigger: CGCCGCCACCATGAGTGATCAGCAGCTGGACTGTGC...GAGAATAAAGCCGATAGCCACCCTCCTCCGGCTCCGAGCCTGCTTCTGCCACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264202.8
ENST00000375142.5
ENST00000375144.6
ENST00000674432.1
ENST00000674449.1
CDS-3UTR TCA 90 bp GGCGCTGTGCGGTCAATGATGCAGCTGTTATGTGACCTGTCGGGGAGGGAAGGGCTTTCTCAGCCGAGCTaGCGGCATGGCCCCATCCTC +
Preference number: 4 (lower is better)
Translates to: GAVRSMMQLLCDLSGREGLSQPS*RHGPIL
Trigger: GAGGATGGGGCCATGCCGTCAGCTCGGCTGAGAAAG...CCCTTCCCTCCCCGACAGGTCACATAACAGCTGCATCATTGACCGCACAGCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000264202.8
ENST00000264203.7
ENST00000375142.5
ENST00000375144.6
ENST00000433834.5
ENST00000674228.1
ENST00000674432.1
ENST00000674449.1
CDS-3UTR TCA 90 bp CCCTGTGGGGGTGGCATATGGCTTACATGGACAGGTGCTCATCTCTGCCCCTGGCTTTCTCAGCCGAGCTaGCGGCATGGCCCCATCCTC +
Preference number: 4 (lower is better)
Translates to: PCGGGIWLTWTGAHLCPWLSQPS*RHGPIL
Trigger: GAGGATGGGGCCATGCCGTCAGCTCGGCTGAGAAAG...CCAGGGGCAGAGATGAGCACCTGTCCATGTAAGCCATATGCCACCCCCACAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR TCA 90 bp ATATGGCTTACATGGACAGGTGCTCATCTCTGCCCCTGGCCACCGGTGACCCGGCTTTCTCAGCCGAGCTaGCGGCATGGCCCCATCCTC +
Preference number: 4 (lower is better)
Translates to: IWLTWTGAHLCPWPPVTRLSQPS*RHGPIL
Trigger: GAGGATGGGGCCATGCCGTCAGCTCGGCTGAGAAAG...CCGGGTCACCGGTGGCCAGGGGCAGAGATGAGCACCTGTCCATGTAAGCCATAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR TCA 90 bp CGAGGTGTGGCAGAAGCAGGCTCGGAGCCGGAGGAGGGTGGCTATCGGCTTTATCTGAGGCTGGCAGTGTaGATACCTGTGCCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: RGVAEAGSEPEEGGYRLYLRLAV*IPVPSW
Trigger: CCAGCTGGGCACAGGTATTCACACTGCCAGCCTCAG...ATAAAGCCGATAGCCACCCTCCTCCGGCTCCGAGCCTGCTTCTGCCACACCTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674449.1
CDS-3UTR GCA 90 bp GGGAGAGATGGCGCTGTGCGGTCAATGATGCAGCTGTTATGTGACCTGTCGGGGACCGAGGGCCACCTCTaGTCCCAGAGCTGTCCCCTG +
Preference number: 4 (lower is better)
Translates to: GRDGAVRSMMQLLCDLSGTEGHL*SQSCPL
Trigger: CAGGGGACAGCTCTGGGAGCAGAGGTGGCCCTCGGT...CCCCGACAGGTCACATAACAGCTGCATCATTGACCGCACAGCGCCATCTCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264202.8
ENST00000264203.7
ENST00000375142.5
CDS-3UTR GCA 90 bp ATATGGCTTACATGGACAGGTGCTCATCTCTGCCCCTGGCCACCGGTGACCCGGACTGCCTGGGGACTGTaGAGGTTGGCTGGGCGGGAA +
Preference number: 4 (lower is better)
Translates to: IWLTWTGAHLCPWPPVTRTAWGL*RLAGRE
Trigger: TTCCCGCCCAGCCAACCTGCACAGTCCCCAGGCAGT...CCGGGTCACCGGTGGCCAGGGGCAGAGATGAGCACCTGTCCATGTAAGCCATAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR GCA 90 bp GCCAAGCAACCTCGAATCAGCGCTTGGAGACAGTGCTCGACTCTGTGGGAGGGAGAGTGGTATCGCCGCTaGAGAGGTCCACGCTGGCGG +
Preference number: 4 (lower is better)
Translates to: AKQPRISAWRQCSTLWEGEWYRR*RGPRWR
Trigger: CCGCCAGCGTGGACCTCTGCAGCGGCGATACCACTC...TCCCTCCCACAGAGTCGAGCACTGTCTCCAAGCGCTGATTCGAGGTTGCTTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR GCA 90 bp ATCTTCCCAGGACTGTCCCTGGCTCTGCGGCGGCCAAAGGCATCAGCCCCCACGCACACACGTGATAGGTaGCGTGTTACATGGGGCCGA +
Preference number: 4 (lower is better)
Translates to: IFPGLSLALRRPKASAPTHTRDR*RVTWGR
Trigger: TCGGCCCCATGTAACACGGCACCTATCACGTGTGTG...CGTGGGGGCTGATGCCTTTGGCCGCCGCAGAGCCAGGGACAGTCCTGGGAAGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR GCA 90 bp GGCGGCCAAAGGCATCAGCCCCCACGGCCCCCAGGCTCCAAATCTCAGCCGATTACTCTCCAGGGATGCTaGCTCCTTCCCTACATCTGG +
Preference number: 4 (lower is better)
Translates to: GGQRHQPPRPPGSKSQPITLQGC*LLPYIW
Trigger: CCAGATGTAGGGAAGGAGGCAGCATCCCTGGAGAGT...AATCGGCTGAGATTTGGAGCCTGGGGGCCGTGGGGGCTGATGCCTTTGGCCGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR GCA 90 bp GAGCGTGTTCTAGATTCATCATCTCAGCCGACCGTGCCTCCTCGACTGGACAAGGGGGTGGGCCTTCAGTaGGCAGCCCCTGGACCTGGG +
Preference number: 4 (lower is better)
Translates to: ERVLDSSSQPTVPPRLDKGVGLQ*AAPGPG
Trigger: CCCAGGTCCAGGGGCTGCGCACTGAAGGCCCACCCC...CTTGTCCAGTCGAGGAGGCACGGTCGGCTGAGATGATGAATCTAGAACACGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR GCA 90 bp GTTCAGGGCGACCGCATTCACGTATGTGTGGGGACGCTCATCAACAAAGCCAGAGGGGTGGGCCTTCAGTaGGCAGCCCCTGGACCTGGG +
Preference number: 4 (lower is better)
Translates to: VQGDRIHVCVGTLINKARGVGLQ*AAPGPG
Trigger: CCCAGGTCCAGGGGCTGCGCACTGAAGGCCCACCCC...TCTGGCTTTGTTGATGAGCGTCCCCACACATACGTGAATGCGGTCGCCCTGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR GCA 90 bp CTGGCCTCATGTCAGAGGCCTGCCTCCTGCTCTGTCCGCCGTGGACCTGGAGGGACCTGGTTTTCTAAGTaGCTGACCCCACCTCCACCT +
Preference number: 4 (lower is better)
Translates to: LASCQRPASCSVRRGPGGTWFSK*LTPPPP
Trigger: AGGTGGAGGTGGGGTCAGGCACTTAGAAAACCAGGT...CCCTCCAGGTCCACGGCGGACAGAGCAGGAGGCAGGCCTCTGACATGAGGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR GCA 90 bp ATGGACAGGTGCTCATCTCTGCCCCTGGCCACCGGTGACCCGGCCATAGTCCCTAGCGCTTGGAGACAGTaGTCGACTCTGTGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: MDRCSSLPLATGDPAIVPSAWRQ*STLWEG
Trigger: TCCCTCCCACAGAGTCGAGCACTGTCTCCAAGCGCT...AGGGACTATGGCCGGGTCACCGGTGGCCAGGGGCAGAGATGAGCACCTGTCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR GCA 90 bp GTGTGGCAGAAGCAGGCTCGGAGCCGGAGGAGGGTGGCTATCGGCTTTATTCTCACAGGTGCTCATCTCTaGCCCTGGCCACCGGTGACC +
Preference number: 4 (lower is better)
Translates to: VWQKQARSRRRVAIGFILTGAHL*PWPPVT
Trigger: GGTCACCGGTGGCCAGGGGCAGAGATGAGCACCTGT...GAGAATAAAGCCGATAGCCACCCTCCTCCGGCTCCGAGCCTGCTTCTGCCACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674432.1
CDS-3UTR GCA 90 bp CCCTGTGGGGGTGGCATATGGCTTACATGGACAGGTGCTCATCTCTGCCCCTGGACAGGTGCTCATCTCTaGCCCTGGCCACCGGTGACC +
Preference number: 4 (lower is better)
Translates to: PCGGGIWLTWTGAHLCPWTGAHL*PWPPVT
Trigger: GGTCACCGGTGGCCAGGGGCAGAGATGAGCACCTGT...CCAGGGGCAGAGATGAGCACCTGTCCATGTAAGCCATATGCCACCCCCACAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR GCA 90 bp TGCTCTGTCCGCCGTGGACCTGGAGGGTCCAGAGAGCGCCCGGCTTTTGTTTGGTACATGGCCGAGACCTaGACCCTCTGCACCTTGCCA +
Preference number: 4 (lower is better)
Translates to: CSVRRGPGGSRERPAFVWYMAET*TLCTLP
Trigger: TGGCAAGGTGCAGAGGGTGCAGGTCTCGGCCATGTA...CCAAACAAAAGCCGGGCGCTCTCTGGACCCTCCAGGTCCACGGCGGACAGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR GCA 90 bp GGGTCTCGGCGGGTTGGTGAGTCCTGTTTTAGTGGGGAGGGTCTCGCGGCTCTCTACATGGCCGAGACCTaGACCCTCTGCACCTTGCCA +
Preference number: 4 (lower is better)
Translates to: GSRRVGESCFSGEGLAALYMAET*TLCTLP
Trigger: TGGCAAGGTGCAGAGGGTGCAGGTCTCGGCCATGTA...GAGAGCCGCGAGACCCTCCCCACTAAAACAGGACTCACCAACCCGCCGAGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR GCA 90 bp GCTGTGCGGTCAATGATGCAGCTGTTATGTGACCTGTCGGGGAGGGAAGGGACGGACCCCGGCCTGCCCTaGAGAATGCTTCGCACGCAC +
Preference number: 4 (lower is better)
Translates to: AVRSMMQLLCDLSGREGTDPGLP*RMLRTH
Trigger: GTGCGTGCGAAGCATTCTGCAGGGCAGGCCGGGGTC...CGTCCCTTCCCTCCCCGACAGGTCACATAACAGCTGCATCATTGACCGCACAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433834.5
CDS-3UTR GCA 90 bp GGGAGAGATGGCGCTGTGCGGTCAATGATGCAGCTGTTATGTGACCTGTCGGGGCCGTGGACCCCGGCCTaGCCTGCAGAATGCTTCGCA +
Preference number: 4 (lower is better)
Translates to: GRDGAVRSMMQLLCDLSGPWTPA*PAECFA
Trigger: TGCGAAGCATTCTGCAGGGCAGGCCGGGGTCCACGG...CCCCGACAGGTCACATAACAGCTGCATCATTGACCGCACAGCGCCATCTCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433834.5
CDS-3UTR GCA 90 bp GGCGCTGTGCGGTCAATGATGCAGCTGTTATGTGACCTGTCGGGGAGGGAAGGGAGGGGAGGCTGCGCCTaGTTGGGTGCATCGTGTCCA +
Preference number: 4 (lower is better)
Translates to: GAVRSMMQLLCDLSGREGRGGCA*LGASCP
Trigger: TGGACACGATGCACCCAAGCAGGCGCAGCCTCCCCT...CCCTTCCCTCCCCGACAGGTCACATAACAGCTGCATCATTGACCGCACAGCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433834.5
CDS-3UTR GCA 90 bp GCTGTGCGGTCAATGATGCAGCTGTTATGTGACCTGTCGGGGAGGGAAGGGACGGAGGGAAGGGGAGGCTaGGCCTGCTTGGGTGCATCG +
Preference number: 4 (lower is better)
Translates to: AVRSMMQLLCDLSGREGTEGRGG*ACLGAS
Trigger: CGATGCACCCAAGCAGGCGCAGCCTCCCCTTCCCTC...CGTCCCTTCCCTCCCCGACAGGTCACATAACAGCTGCATCATTGACCGCACAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433834.5
CDS-3UTR GCA 90 bp TCTCACAGGCCGGGGACACCAGCCACTTTCCTGGCCCCTCAGGCAGCAGCTCAGCAACCACCAAACGAGTaGCCTGCATCCTGCTATGGG +
Preference number: 4 (lower is better)
Translates to: SHRPGTPATFLAPQAAAQQPPNE*PASCYG
Trigger: CCCATAGCAGGATGCAGGGCACTCGTTTGGTGGTTG...CTGAGCTGCTGCCTGAGGGGCCAGGAAAGTGGCTGGTGTCCCCGGCCTGTGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674278.1
CDS-3UTR GCA 90 bp AGCGAGGTGTGGCAGAAGCAGGCTCGGAGCCGGAGGAGGGTGGCTATCGGCTTTGCTGGCTCCATGGGCTaGTTCACGGAGAGCAGGTTT +
Preference number: 4 (lower is better)
Translates to: SEVWQKQARSRRRVAIGFAGSMG*FTESRF
Trigger: AAACCTGCTCTCCGTGAAGCAGCCCATGGAGCCAGC...AAAGCCGATAGCCACCCTCCTCCGGCTCCGAGCCTGCTTCTGCCACACCTCGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674449.1
CDS-3UTR CCA 90 bp GGGAGAGATGGCGCTGTGCGGTCAATGATGCAGCTGTTATGTGACCTGTCGGGGGCCGAGCTGACGGCATaGCCCCATCCTCCAAGGGAG +
Preference number: 4 (lower is better)
Translates to: GRDGAVRSMMQLLCDLSGAELTA*PHPPRE
Trigger: CTCCCTTGGAGGATGGGGCCATGCCGTCAGCTCGGC...CCCCGACAGGTCACATAACAGCTGCATCATTGACCGCACAGCGCCATCTCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000264202.8
ENST00000264203.7
ENST00000375142.5
ENST00000375144.6
ENST00000433834.5
ENST00000674228.1
ENST00000674432.1
ENST00000674449.1
CDS-3UTR CCA 90 bp GAGAAAGGGATGGCCTACTGCCTCTCCACCCCATGGAACAGCCTGGTCCCTAGAGCCGAGCTGACGGCATaGCCCCATCCTCCAAGGGAG +
Preference number: 4 (lower is better)
Translates to: EKGMAYCLSTPWNSLVPRAELTA*PHPPRE
Trigger: CTCCCTTGGAGGATGGGGCCATGCCGTCAGCTCGGC...TCTAGGGACCAGGCTGTTCCATGGGGTGGAGAGGCAGTAGGCCATCCCTTTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674278.1
CDS-3UTR CCA 90 bp CGGCGGCCAAAGGCATCAGCCCCCACGGCCCCCAGGCTCCAAATCTCAGCCGATTGCACTTCTACCACGTaGATGGAATCCCAGCAGCCT +
Preference number: 4 (lower is better)
Translates to: RRPKASAPTAPRLQISADCTSTT*MESQQP
Trigger: AGGCTGCTGGGATTCCATCCACGTGGTAGAAGTGCA...ATCGGCTGAGATTTGGAGCCTGGGGGCCGTGGGGGCTGATGCCTTTGGCCGCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR CCA 90 bp AGCGAGGTGTGGCAGAAGCAGGCTCGGAGCCGGAGGAGGGTGGCTATCGGCTTTGGGCGGTGCGACCGCTaGATTTCTCCTGCACTTCTA +
Preference number: 4 (lower is better)
Translates to: SEVWQKQARSRRRVAIGFGRCDR*ISPALL
Trigger: TAGAAGTGCAGGAGAAATCCAGCGGTCGCACCGCCC...AAAGCCGATAGCCACCCTCCTCCGGCTCCGAGCCTGCTTCTGCCACACCTCGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264202.8
ENST00000264203.7
ENST00000375142.5
ENST00000375144.6
ENST00000674449.1
CDS-3UTR CCA 90 bp GGCCAAAGGCATCAGCCCCCACGGCCCCCAGGCTCCAAATCTCAGCCGATTCCCGGAGCCGGAGGAGGGTaGCTATCGGCTTTATTCTCA +
Preference number: 4 (lower is better)
Translates to: GQRHQPPRPPGSKSQPIPGAGGG*LSALFS
Trigger: TGAGAATAAAGCCGATAGCCACCCTCCTCCGGCTCC...GGGAATCGGCTGAGATTTGGAGCCTGGGGGCCGTGGGGGCTGATGCCTTTGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674432.1
CDS-3UTR CCA 90 bp TGCTCTGTCCGCCGTGGACCTGGAGGGTCCAGAGAGCGCCCGGCTTTTGTTTGGCGCCCGGCTTTTGTTTaGGCTGACACTGCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: CSVRRGPGGSRERPAFVWRPAFV*ADTAEL
Trigger: CAGCTCTGCAGTGTCAGCCCAAACAAAAGCCGGGCG...CCAAACAAAAGCCGGGCGCTCTCTGGACCCTCCAGGTCCACGGCGGACAGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR CCA 90 bp GCCCGCCAGGTCTTGGCTGGATCACACGAAGGAGAAAGTTCCAGAGCTAGAATCCCCCAGTCCACGAGCTaGGGCAGCCCCGGGACTGCA +
Preference number: 4 (lower is better)
Translates to: ARQVLAGSHEGESSRARIPQSTS*GSPGTA
Trigger: TGCAGTCCCGGGGCTGCCCCAGCTCGTGGACTGGGG...GATTCTAGCTCTGGAACTTTCTCCTTCGTGTGATCCAGCCAAGACCTGGCGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR CCA 90 bp GGTCACGAAGACCAAGCCTCCCCCAGGTGGGCAGGGGATCAGAAGACAAGGGTCTGGTGTATCGGGCAGTaGCTGCCAGTGGCAGGCCTA +
Preference number: 4 (lower is better)
Translates to: GHEDQASPRWAGDQKTRVWCIGQ*LPVAGL
Trigger: TAGGCCTGCCACTGGCAGCCACTGCCCGATACACCA...GACCCTTGTCTTCTGATCCCCTGCCCACCTGGGGGAGGCTTGGTCTTCGTGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR CCA 90 bp GGCCAAAGGCATCAGCCCCCACGGCCCCCAGGCTCCAAATCTCAGCCGATTCCCGCGGGAAAGTGTGTTTaGTGTATCGGGCAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: GQRHQPPRPPGSKSQPIPAGKCV*CIGQWL
Trigger: CAGCCACTGCCCGATACACCAAACACACTTTCCCGC...GGGAATCGGCTGAGATTTGGAGCCTGGGGGCCGTGGGGGCTGATGCCTTTGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR CCA 90 bp AGGCCCTGTGGGGGTGGCATATGGCTTACATGGACAGGTGCTCATCTCTGCCCCGGCTACACGGGAATGTaGCTGTGCACCGACCGGGAG +
Preference number: 4 (lower is better)
Translates to: RPCGGGIWLTWTGAHLCPGYTGM*LCTDRE
Trigger: CTCCCGGTCGGTGCACAGCCACATTCCCGTGTAGCC...GGGGCAGAGATGAGCACCTGTCCATGTAAGCCATATGCCACCCCCACAGGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR CCA 90 bp GTAGAGGGCTGCTCAAGAAGAGTGCTACGGAGAGTGCACTCAGCCGGACTCTCATGGCCGAGTCGGCACTaGGCGTCCAGGCAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: VEGCSRRVLRRVHSAGLSWPSRH*ASRQLQ
Trigger: CTGGAGCTGCCTGGACGCCCAGTGCCGACTCGGCCA...TGAGAGTCCGGCTGAGTGCACTCTCCGTAGCACTCTTCTTGAGCAGCCCTCTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR CCA 90 bp GCCTGGGGACTGTGCAGGTTGGCTGGGCGGGAAAGTGTGTTTGGTGTATCGGGCAGGTTATGCTGGTTGTaGCCGAGTCGGCACTGGGCG +
Preference number: 4 (lower is better)
Translates to: AWGLCRLAGRESVFGVSGRLCWL*PSRHWA
Trigger: CGCCCAGTGCCGACTCGGCCACAACCAGCATAACCT...GCCCGATACACCAAACACACTTTCCCGCCCAGCCAACCTGCACAGTCCCCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR CCA 90 bp TTAACTTGGCCCAGAAAACCCCTCAGCCCGGATTGCAAAGGGCGGCACAGGACATCAGTGCGCAGCCCCTaGACCTGGGCTCTGCAGCCC +
Preference number: 4 (lower is better)
Translates to: LTWPRKPLSPDCKGRHRTSVRSP*TWALQP
Trigger: GGGCTGCAGAGCCCAGGTCCAGGGGCTGCGCACTGA...TGTCCTGTGCCGCCCTTTGCAATCCGGGCTGAGGGGTTTTCTGGGCCAAGTTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR CCA 90 bp GGCGGCCAAAGGCATCAGCCCCCACGGCCCCCAGGCTCCAAATCTCAGCCGATTCATCTTGAGCAGACCTaGCTGCCAGGGTTTCTACGC +
Preference number: 4 (lower is better)
Translates to: GGQRHQPPRPPGSKSQPIHLEQT*LPGFLR
Trigger: GCGTAGAAACCCTGGCAGCCAGGTCTGCTCAAGATG...AATCGGCTGAGATTTGGAGCCTGGGGGCCGTGGGGGCTGATGCCTTTGGCCGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR CCA 90 bp TCATGTCAGAGGCCTGCCTCCTGCTCTGTCCGCCGTGGACCTGGAGGGTCCAGAGGTCACTGGCTCTTCTaGGAAGGAAGAGCCAAGCCC +
Preference number: 4 (lower is better)
Translates to: SCQRPASCSVRRGPGGSRGHWLF*EGRAKP
Trigger: GGGCTTGGCTCTTCCTTCCCAGAAGAGCCAGTGACC...TCTGGACCCTCCAGGTCCACGGCGGACAGAGCAGGAGGCAGGCCTCTGACATGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR CCA 90 bp CTTGCCAGGCCCTGTGGGGGTGGCATATGGCTTACATGGACAGGTGCTCATCTCAGCGGGAGGTCAACATaGCCAGCGGGAGATGCGGCG +
Preference number: 4 (lower is better)
Translates to: LARPCGGGIWLTWTGAHLSGRST*PAGDAA
Trigger: CGCCGCATCTCCCGCTGGCCATGTTGACCTCCCGCT...GAGATGAGCACCTGTCCATGTAAGCCATATGCCACCCCCACAGGGCCTGGCAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR CCA 90 bp CTTGCCAGGCCCTGTGGGGGTGGCATATGGCTTACATGGACAGGTGCTCATCTCTCCCAGGACTGTCCCTaGCTCTGCGGCGGCCAAAGG +
Preference number: 4 (lower is better)
Translates to: LARPCGGGIWLTWTGAHLSQDCP*LCGGQR
Trigger: CCTTTGGCCGCCGCAGAGCCAGGGACAGTCCTGGGA...GAGATGAGCACCTGTCCATGTAAGCCATATGCCACCCCCACAGGGCCTGGCAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR CCA 90 bp GGGTCTCGGCGGGTTGGTGAGTCCTGTTTTAGTGGGGAGGGTCTCGCGGCTCTCTCAGAACAGCTACCCTaGGTTGCTGGCTGGGGACTC +
Preference number: 4 (lower is better)
Translates to: GSRRVGESCFSGEGLAALSEQLP*VAGWGL
Trigger: GAGTCCCCAGCCAGCAACCCAGGGTAGCTGTTCTGA...GAGAGCCGCGAGACCCTCCCCACTAAAACAGGACTCACCAACCCGCCGAGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR CCA 90 bp TCATGTCAGAGGCCTGCCTCCTGCTCTGTCCGCCGTGGACCTGGAGGGTCCAGACAGGCCCTGTGGGGGTaGCATATGGCTTACATGGAC +
Preference number: 4 (lower is better)
Translates to: SCQRPASCSVRRGPGGSRQALWG*HMAYMD
Trigger: GTCCATGTAAGCCATATGCCACCCCCACAGGGCCTG...TCTGGACCCTCCAGGTCCACGGCGGACAGAGCAGGAGGCAGGCCTCTGACATGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR CCA 90 bp GGGAGGAGTCATCTTGAGCAGACCTGGCTGCCAGGGTTTCTACGCCAGGACGCCGGGCAAAGGGGTACATaGCCGAGACCTGCACCCTCT +
Preference number: 4 (lower is better)
Translates to: GRSHLEQTWLPGFLRQDAGQRGT*PRPAPS
Trigger: AGAGGGTGCAGGTCTCGGCCATGTACCCCTTTGCCC...GGCGTCCTGGCGTAGAAACCCTGGCAGCCAGGTCTGCTCAAGATGACTCCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR CCA 90 bp AGAGCGAGGTGTGGCAGAAGCAGGCTCGGAGCCGGAGGAGGGTGGCTATCGGCTCACCATGCCAGTGCCTaGCTGATTTGCTGCATGGAC +
Preference number: 4 (lower is better)
Translates to: RARCGRSRLGAGGGWLSAHHASA*LICCMD
Trigger: GTCCATGCAGCAAATCAGCCAGGCACTGGCATGGTG...AGCCGATAGCCACCCTCCTCCGGCTCCGAGCCTGCTTCTGCCACACCTCGCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375144.6
CDS-3UTR CCA 90 bp GCCTGGCCCCACTGCCCCTGCACATGCAAGGTAAGGAAGGGCCTCCTGCCTCTCCCCCATGGAACAGCCTaGTCCCTAGAAAACCGAGTG +
Preference number: 4 (lower is better)
Translates to: AWPHCPCTCKVRKGLLPLPHGTA*SLENRV
Trigger: CACTCGGTTTTCTAGGGACCAGGCTGTTCCATGGGG...GAGAGGCAGGAGGCCCTTCCTTACCTTGCATGTGCAGGGGCAGTGGGGCCAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000674278.1
3UTR CAA 72 bp CTGGTATCCCGGATGGCAGCTCCAACTGCTGTCCCTTaGGTGGTCTGCGGTCCCTGTCACCCAGGAAGAGCC +
Preference number: 4 (lower is better)
Translates to: LVSRMAAPTAVP*VVCGPCHPGRA
Trigger: GGCTCTTCCTGGGTGACAGGGACCGCAGACCACCAAAGGGACAGCAGTTGGAGCTGCCATCCGGGATACCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674278.1
CDS-3UTR TCA 90 bp GCTGTGCGGTCAATGATGCAGCTGTTATGTGACCTGTCGGGGAGGGAAGGGACGGCACAGTCCAGCTGCTaGTCACTCATGGTGGCGGCG +
Preference number: 4 (lower is better)
Translates to: AVRSMMQLLCDLSGREGTAQSSC*SLMVAA
Trigger: CGCCGCCACCATGAGTGATCAGCAGCTGGACTGTGC...CGTCCCTTCCCTCCCCGACAGGTCACATAACAGCTGCATCATTGACCGCACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264202.8
ENST00000375142.5
ENST00000375144.6
ENST00000674432.1
ENST00000674449.1
CDS-3UTR TCA 90 bp GCTGTGCGGTCAATGATGCAGCTGTTATGTGACCTGTCGGGGAGGGAAGGGACGCTTTCTCAGCCGAGCTaGCGGCATGGCCCCATCCTC +
Preference number: 4 (lower is better)
Translates to: AVRSMMQLLCDLSGREGTLSQPS*RHGPIL
Trigger: GAGGATGGGGCCATGCCGTCAGCTCGGCTGAGAAAG...CGTCCCTTCCCTCCCCGACAGGTCACATAACAGCTGCATCATTGACCGCACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000264202.8
ENST00000264203.7
ENST00000375142.5
ENST00000375144.6
ENST00000433834.5
ENST00000674228.1
ENST00000674432.1
ENST00000674449.1
CDS-3UTR TCA 90 bp ACACGGCCAGTGCCTGTGGGTGCTACGTCAGCCGACAACAAACATGCCCACAGACTTTCTCAGCCGAGCTaGCGGCATGGCCCCATCCTC +
Preference number: 4 (lower is better)
Translates to: TRPVPVGATSADNKHAHRLSQPS*RHGPIL
Trigger: GAGGATGGGGCCATGCCGTCAGCTCGGCTGAGAAAG...TCTGTGGGCATGTTTGTTGTCGGCTGACGTAGCACCCACAGGCACTGGCCGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674278.1
CDS-3UTR TCA 90 bp AGGTCACCCCTTCCAAGCCAGCTAGCCCTGGACAGGCAATGTGCCGCTGAGCAGGATGCAGCTGTTATGTaGCCTGTCGGGGAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: RSPLPSQLALDRQCAAEQDAAVM*PVGEGR
Trigger: CCTTCCCTCCCCGACAGGTCACATAACAGCTGCATC...CTGCTCAGCGGCACATTGCCTGTCCAGGGCTAGCTGGCTTGGAAGGGGTGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR TCA 90 bp GTGTTACATGGGGCCGAGGCTACACGGGAATGTGGCTGTGCACCGACCGGGAGCGCGCTGTGCGGTCAATaGTGCAGCTGTTATGTGACC +
Preference number: 4 (lower is better)
Translates to: VLHGAEATRECGCAPTGSALCGQ*CSCYVT
Trigger: GGTCACATAACAGCTGCATCATTGACCGCACAGCGC...GCTCCCGGTCGGTGCACAGCCACATTCCCGTGTAGCCTCGGCCCCATGTAACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR TCA 90 bp CGGCCTCCGTGGGACGGGAGAGTCTGCGCAGGACGGCACCGAGGGCCACCTCTGGTTTTCATTTGCAGATaGAACCCCAGCAGTTCCATT +
Preference number: 4 (lower is better)
Translates to: RPPWDGRVCAGRHRGPPLVFICR*NPSSSI
Trigger: AATGGAACTGCTGGGGTTTCATCTGCAAATGAAAAC...CAGAGGTGGCCCTCGGTGCCGTCCTGCGCAGACTCTCCCGTCCCACGGAGGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264203.7
CDS-3UTR TCA 90 bp GGGAGGAGTCATCTTGAGCAGACCTGGCTGCCAGGGTTTCTACGCCAGGACGCCACTGCAGCCTACCAATaGGGACACCGAGGCCCAAGA +
Preference number: 4 (lower is better)
Translates to: GRSHLEQTWLPGFLRQDATAAYQ*GHRGPR
Trigger: TCTTGGGCCTCGGTGTCCTCATTGGTAGGCTGCAGT...GGCGTCCTGGCGTAGAAACCCTGGCAGCCAGGTCTGCTCAAGATGACTCCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR TCA 90 bp TGCTCTGTCCGCCGTGGACCTGGAGGGTCCAGAGAGCGCCCGGCTTTTGTTTGGCAACAGCACCCAGACTaGGTTCTGGCTACCGAATCC +
Preference number: 4 (lower is better)
Translates to: CSVRRGPGGSRERPAFVWQQHPD*VLATES
Trigger: GGATTCGGTAGCCAGAACTCAGTCTGGGTGCTGTTG...CCAAACAAAAGCCGGGCGCTCTCTGGACCCTCCAGGTCCACGGCGGACAGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR TCA 90 bp CCCTGTGGGGGTGGCATATGGCTTACATGGACAGGTGCTCATCTCTGCCCCTGGATGCCAGTGCCTGGCTaGTTTGCTGCATGGACCCGC +
Preference number: 4 (lower is better)
Translates to: PCGGGIWLTWTGAHLCPWMPVPG*FAAWTR
Trigger: GCGGGTCCATGCAGCAAATCAGCCAGGCACTGGCAT...CCAGGGGCAGAGATGAGCACCTGTCCATGTAAGCCATATGCCACCCCCACAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR TCA 90 bp GCGAGGTGTGGCAGAAGCAGGCTCGGAGCCGGAGGAGGGTGGCTATCGGCTTTAGCGTTATCAGCAGATTaGACAGGGACTGGTGAGGCG +
Preference number: 4 (lower is better)
Translates to: ARCGRSRLGAGGGWLSALALSAD*TGTGEA
Trigger: CGCCTCACCAGTCCCTGTTCAATCTGCTGATAACGC...TAAAGCCGATAGCCACCCTCCTCCGGCTCCGAGCCTGCTTCTGCCACACCTCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375144.6
CDS-3UTR GCA 90 bp AGAGCGAGGTGTGGCAGAAGCAGGCTCGGAGCCGGAGGAGGGTGGCTATCGGCTACTTGTAATGGGCGGTaGGACCGCTGGATTTCTCCT +
Preference number: 4 (lower is better)
Translates to: RARCGRSRLGAGGGWLSATCNGR*DRWISP
Trigger: AGGAGAAATCCAGCGGTCGCACCGCCCATTACAAGT...AGCCGATAGCCACCCTCCTCCGGCTCCGAGCCTGCTTCTGCCACACCTCGCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264202.8
ENST00000264203.7
ENST00000375142.5
ENST00000375144.6
ENST00000674449.1
CDS-3UTR GCA 90 bp GGGAGAGATGGCGCTGTGCGGTCAATGATGCAGCTGTTATGTGACCTGTCGGGGCTCATGTCAGAGGCCTaGCTCCTGCTCTGTCCGCCG +
Preference number: 4 (lower is better)
Translates to: GRDGAVRSMMQLLCDLSGLMSEA*LLLCPP
Trigger: CGGCGGACAGAGCAGGAGGCAGGCCTCTGACATGAG...CCCCGACAGGTCACATAACAGCTGCATCATTGACCGCACAGCGCCATCTCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR GCA 90 bp GGTCACGAAGACCAAGCCTCCCCCAGGTGGGCAGGGGATCAGAAGACAAGGGTCCGACTCACACGGTGCTaGTGGACTGCAGAGCGTGTT +
Preference number: 4 (lower is better)
Translates to: GHEDQASPRWAGDQKTRVRLTRC*WTAERV
Trigger: AACACGCTCTGCAGTCCAGCAGCACCGTGTGAGTCG...GACCCTTGTCTTCTGATCCCCTGCCCACCTGGGGGAGGCTTGGTCTTCGTGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR GCA 90 bp GTGTTACATGGGGCCGAGGCTACACGGGAATGTGGCTGTGCACCGACCGGGAGCCACACACGTGATAGGTaGCGTGTTACATGGGGCCGA +
Preference number: 4 (lower is better)
Translates to: VLHGAEATRECGCAPTGSHTRDR*RVTWGR
Trigger: TCGGCCCCATGTAACACGGCACCTATCACGTGTGTG...GCTCCCGGTCGGTGCACAGCCACATTCCCGTGTAGCCTCGGCCCCATGTAACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR GCA 90 bp GCTGATTTGCTGCATGGACCCGCTTCCTGGGGTGAGGCTCTGGGTCACTGGGCTCACACAAGTGGCTGCTaGTGGAGAGGCAGCATCCGT +
Preference number: 4 (lower is better)
Translates to: ADLLHGPASWGEALGHWAHTSGC*WRGSIR
Trigger: ACGGATGCTGCCTCTCCAGCAGCAGCCACTTGTGTG...AGCCCAGTGACCCAGAGCCTCACCCCAGGAAGCGGGTCCATGCAGCAAATCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR GCA 90 bp AGGCCCTGTGGGGGTGGCATATGGCTTACATGGACAGGTGCTCATCTCTGCCCCGGACAGTCAGGCCGGTaGACACAAGTGGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: RPCGGGIWLTWTGAHLCPGQSGR*TQVAAA
Trigger: AGCAGCAGCCACTTGTGTGCACCGGCCTGACTGTCC...GGGGCAGAGATGAGCACCTGTCCATGTAAGCCATATGCCACCCCCACAGGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR GCA 90 bp GTGTGGCAGAAGCAGGCTCGGAGCCGGAGGAGGGTGGCTATCGGCTTTATTCTCGGACAGTCAGGCCGGTaGACACAAGTGGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: VWQKQARSRRRVAIGFILGQSGR*TQVAAA
Trigger: AGCAGCAGCCACTTGTGTGCACCGGCCTGACTGTCC...GAGAATAAAGCCGATAGCCACCCTCCTCCGGCTCCGAGCCTGCTTCTGCCACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674432.1
CDS-3UTR GCA 90 bp GGGAGGAGTCATCTTGAGCAGACCTGGCTGCCAGGGTTTCTACGCCAGGACGCCTTGAGCAGACCTGGCTaGCAGGGTTTCTACGCCAGG +
Preference number: 4 (lower is better)
Translates to: GRSHLEQTWLPGFLRQDALSRPG*QGFYAR
Trigger: CCTGGCGTAGAAACCCTGGCAGCCAGGTCTGCTCAA...GGCGTCCTGGCGTAGAAACCCTGGCAGCCAGGTCTGCTCAAGATGACTCCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR GCA 90 bp GTGCACCGACCGGGAGCACACGTGGGGGTTAGTGGTGGTTTAAATGGCCGCGGAAGCGCTTGGAGACAGTaGTCGACTCTGTGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: VHRPGAHVGVSGGLNGRGSAWRQ*STLWEG
Trigger: TCCCTCCCACAGAGTCGAGCACTGTCTCCAAGCGCT...TCCGCGGCCATTTAAACCACCACTAACCCCCACGTGTGCTCCCGGTCGGTGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR GCA 90 bp GGGAGAGATGGCGCTGTGCGGTCAATGATGCAGCTGTTATGTGACCTGTCGGGGTCCCCAGGGGCTTCTTaGCAAGCTCACAGCGGGAGG +
Preference number: 4 (lower is better)
Translates to: GRDGAVRSMMQLLCDLSGSPGAS*QAHSGR
Trigger: CCTCCCGCTGTGAGCTTGGCAAGAAGCCCCTGGGGA...CCCCGACAGGTCACATAACAGCTGCATCATTGACCGCACAGCGCCATCTCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR GCA 90 bp GCTGTGCGGTCAATGATGCAGCTGTTATGTGACCTGTCGGGGAGGGAAGGGACGGACTGTCCCTGGCTCTaGGGCGGCCAAAGGCATCAG +
Preference number: 4 (lower is better)
Translates to: AVRSMMQLLCDLSGREGTDCPWL*GGQRHQ
Trigger: CTGATGCCTTTGGCCGCCGCAGAGCCAGGGACAGTC...CGTCCCTTCCCTCCCCGACAGGTCACATAACAGCTGCATCATTGACCGCACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR GCA 90 bp AGGCCCTGTGGGGGTGGCATATGGCTTACATGGACAGGTGCTCATCTCTGCCCCCACAGGACAGCCAAGTaGCCCTGGGATCCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: RPCGGGIWLTWTGAHLCPHRTAK*PWDPCC
Trigger: ACAGCAGGGATCCCAGGGGCACTTGGCTGTCCTGTG...GGGGCAGAGATGAGCACCTGTCCATGTAAGCCATATGCCACCCCCACAGGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR GCA 90 bp ATCTTGAGCAGACCTGGCTGCCAGGGTTTCTACGCCAGGACGCCCCCAGTGGGCCCCACAAGTGCAAGGTaGAGCGTTATCCCACCCTTG +
Preference number: 4 (lower is better)
Translates to: ILSRPGCQGFYARTPPVGPTSAR*SVIPPL
Trigger: CAAGGGTGGGATAACGCTGCACCTTGCACTTGTGGG...GCCCACTGGGGGCGTCCTGGCGTAGAAACCCTGGCAGCCAGGTCTGCTCAAGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR GCA 90 bp GATGGCGCTGTGCGGTCAATGATGCAGCTGTTATGTGACCTGTCGGGGAGGGAACGCAGAGCAGCGCGCTaGCTTCTGGGCACACCGATG +
Preference number: 4 (lower is better)
Translates to: DGAVRSMMQLLCDLSGRERRAAR*LLGTPM
Trigger: CATCGGTGTGCCCAGAAGGCAGCGCGCTGCTCTGCG...TTCCCTCCCCGACAGGTCACATAACAGCTGCATCATTGACCGCACAGCGCCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433834.5
CDS-3UTR GCA 90 bp GCTGTGCGGTCAATGATGCAGCTGTTATGTGACCTGTCGGGGAGGGAAGGGACGGCCTGCCCTGCAGAATaGTTCGCACGCACAGCACCC +
Preference number: 4 (lower is better)
Translates to: AVRSMMQLLCDLSGREGTACPAE*FARTAP
Trigger: GGGTGCTGTGCGTGCGAAGCATTCTGCAGGGCAGGC...CGTCCCTTCCCTCCCCGACAGGTCACATAACAGCTGCATCATTGACCGCACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433834.5
CDS-3UTR GCA 90 bp TCTCACAGGCCGGGGACACCAGCCACTTTCCTGGCCCCTCAGGCAGCAGCTCAGGGAGAGCTGTGGCCTTaGTCAGGGGACAACAAACAA +
Preference number: 4 (lower is better)
Translates to: SHRPGTPATFLAPQAAAQGELWP*SGDNKQ
Trigger: TTGTTTGTTGTCCCCTGAGCAAGGCCACAGCTCTCC...CTGAGCTGCTGCCTGAGGGGCCAGGAAAGTGGCTGGTGTCCCCGGCCTGTGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000674278.1
CDS-3UTR GCA 90 bp AAGGGGCACCAGTCTCAGGGCCTTAGACAGGTGAGTTTGCCCCTGCCTCAGAGATGGCAGCTGCACCTGTaGAGCCCTCCTGGGCACAAG +
Preference number: 4 (lower is better)
Translates to: KGHQSQGLRQVSLPLPQRWQLHL*SPPGHK
Trigger: CTTGTGCCCAGGAGGGCTGCACAGGTGCAGCTGCCA...TCTCTGAGGCAGGGGCAAACTCACCTGTCTAAGGCCCTGAGACTGGTGCCCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674278.1
CDS-3UTR GCA 90 bp AGCGGGTGTCCACTCACTCGTTCACTAAGGCTCGAATGTGGACACGTCCCCCAAGGTGAAGGGAGCTGGTaGCTCTCAGGCCGTCCCGAG +
Preference number: 4 (lower is better)
Translates to: SGCPLTRSLRLECGHVPQGEGSW*LSGRPE
Trigger: CTCGGGACGGCCTGAGAGGCACCAGCTCCCTTCACC...TTGGGGGACGTGTCCACATTCGAGCCTTAGTGAACGAGTGAGTGGACACCCGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674449.1
CDS-3UTR GCA 90 bp GGGAGAGATGGCGCTGTGCGGTCAATGATGCAGCTGTTATGTGACCTGTCGGGGTCCCTGCAGACATCATaGTGCCCCGATGGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: GRDGAVRSMMQLLCDLSGSLQTS*CPDGGG
Trigger: GCCACCCCCATCGGGGCAGCATGATGTCTGCAGGGA...CCCCGACAGGTCACATAACAGCTGCATCATTGACCGCACAGCGCCATCTCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000674449.1
CDS-3UTR CCA 90 bp GATGGCGCTGTGCGGTCAATGATGCAGCTGTTATGTGACCTGTCGGGGAGGGAAGCCGAGCTGACGGCATaGCCCCATCCTCCAAGGGAG +
Preference number: 4 (lower is better)
Translates to: DGAVRSMMQLLCDLSGREAELTA*PHPPRE
Trigger: CTCCCTTGGAGGATGGGGCCATGCCGTCAGCTCGGC...TTCCCTCCCCGACAGGTCACATAACAGCTGCATCATTGACCGCACAGCGCCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000264202.8
ENST00000264203.7
ENST00000375142.5
ENST00000375144.6
ENST00000433834.5
ENST00000674228.1
ENST00000674432.1
ENST00000674449.1
CDS-3UTR CCA 90 bp GCATCACCGTGGAGGTCAACTTGTAATGGGCGGTGCGACCGCTGGATTTCTCCTGCCGAGCTGACGGCATaGCCCCATCCTCCAAGGGAG +
Preference number: 4 (lower is better)
Translates to: ASPWRSTCNGRCDRWISPAELTA*PHPPRE
Trigger: CTCCCTTGGAGGATGGGGCCATGCCGTCAGCTCGGC...AGGAGAAATCCAGCGGTCGCACCGCCCATTACAAGTTGACCTCCACGGTGATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674228.1
ENST00000674449.1
CDS-3UTR CCA 90 bp GCGAGGTGTGGCAGAAGCAGGCTCGGAGCCGGAGGAGGGTGGCTATCGGCTTTAGGAGCCGGAGGAGGGTaGCTATCGGCTTTATTCTCA +
Preference number: 4 (lower is better)
Translates to: ARCGRSRLGAGGGWLSALGAGGG*LSALFS
Trigger: TGAGAATAAAGCCGATAGCCACCCTCCTCCGGCTCC...TAAAGCCGATAGCCACCCTCCTCCGGCTCCGAGCCTGCTTCTGCCACACCTCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264202.8
ENST00000264203.7
ENST00000375142.5
ENST00000375144.6
ENST00000674449.1
CDS-3UTR CCA 90 bp CGTGGGACGGGAGAGTCTGCGCAGGACGGCACCGAGGGCCACCTCTGCTCCCAGAAGTCTGCACAGACCTaGATCGGCTTAATTATCAGG +
Preference number: 4 (lower is better)
Translates to: RGTGESAQDGTEGHLCSQKSAQT*IGLIIR
Trigger: CCTGATAATTAAGCCGATCCAGGTCTGTGCAGACTT...CTGGGAGCAGAGGTGGCCCTCGGTGCCGTCCTGCGCAGACTCTCCCGTCCCACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375142.5
CDS-3UTR CCA 90 bp GCTGTGCGGTCAATGATGCAGCTGTTATGTGACCTGTCGGGGAGGGAAGGGACGCAGGACACTGGCCACTaGCAGCAGAGCCCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: AVRSMMQLLCDLSGREGTQDTGH*QQSPGR
Trigger: TCTGCCAGGGCTCTGCTGCCAGTGGCCAGTGTCCTG...CGTCCCTTCCCTCCCCGACAGGTCACATAACAGCTGCATCATTGACCGCACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR CCA 90 bp CGAGGTGTGGCAGAAGCAGGCTCGGAGCCGGAGGAGGGTGGCTATCGGCTTTATCGCCCGGCTTTTGTTTaGGCTGACACTGCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: RGVAEAGSEPEEGGYRLYRPAFV*ADTAEL
Trigger: CAGCTCTGCAGTGTCAGCCCAAACAAAAGCCGGGCG...ATAAAGCCGATAGCCACCCTCCTCCGGCTCCGAGCCTGCTTCTGCCACACCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375144.6
CDS-3UTR CCA 90 bp GAGTGGAAAGCACACACACGTGATAGGTGCCGTGTTACATGGGGCCGAGGCTACCCCCCAGCTGGGCTCTaGCCTCATGTCAGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: EWKAHTRDRCRVTWGRGYPPAGL*PHVRGL
Trigger: CAGGCCTCTGACATGAGGCCAGAGCCCAGCTGGGGG...GTAGCCTCGGCCCCATGTAACACGGCACCTATCACGTGTGTGTGCTTTCCACTC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR CCA 90 bp CCGAGGCCCAAGACCACACAGCTAGTAACTGGCAGAGCCAGGGTTCAAATCCCTCCGTGCCTCCTCGACTaGACAAGGGCCTCTGCGAGG +
Preference number: 4 (lower is better)
Translates to: PRPKTTQLVTGRARVQIPPCLLD*TRASAR
Trigger: CCTCGCAGAGGCCCTTGTCCAGTCGAGGAGGCACGG...AGGGATTTGAACCCTGGCTCTGCCAGTTACTAGCTGTGTGGTCTTGGGCCTCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR CCA 90 bp AGGTCACCCCTTCCAAGCCAGCTAGCCCTGGACAGGCAATGTGCCGCTGAGCAGAACGCCAGGGACCACTaGGCTCTAACCCTGTCACAG +
Preference number: 4 (lower is better)
Translates to: RSPLPSQLALDRQCAAEQNARDH*ALTLSQ
Trigger: CTGTGACAGGGTTAGAGCCCAGTGGTCCCTGGCGTT...CTGCTCAGCGGCACATTGCCTGTCCAGGGCTAGCTGGCTTGGAAGGGGTGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR CCA 90 bp TGCTCTGTCCGCCGTGGACCTGGAGGGTCCAGAGAGCGCCCGGCTTTTGTTTGGGCGGGAAAGTGTGTTTaGTGTATCGGGCAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: CSVRRGPGGSRERPAFVWAGKCV*CIGQWL
Trigger: CAGCCACTGCCCGATACACCAAACACACTTTCCCGC...CCAAACAAAAGCCGGGCGCTCTCTGGACCCTCCAGGTCCACGGCGGACAGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR CCA 90 bp TTTAGTGGGGAGGGTCTCGCGGCTCTCAGGCAGGGTACCTGGATCGGCTTAATTCGCTGGCGGTGGTCGTaGTATTCAGGGGCTCGCCAC +
Preference number: 4 (lower is better)
Translates to: FSGEGLAALRQGTWIGLIRWRWS*YSGARH
Trigger: GTGGCGAGCCCCTGAATACCACGACCACCGCCAGCG...AATTAAGCCGATCCAGGTACCCTGCCTGAGAGCCGCGAGACCCTCCCCACTAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR CCA 90 bp GGCGCTGTGCGGTCAATGATGCAGCTGTTATGTGACCTGTCGGGGAGGGAAGGGCTCTGGGGTGTGGAGTaGTATCGCCGCTGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: GAVRSMMQLLCDLSGREGLWGVE*YRRCRG
Trigger: ACCTCTGCAGCGGCGATACCACTCCACACCCCAGAG...CCCTTCCCTCCCCGACAGGTCACATAACAGCTGCATCATTGACCGCACAGCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR CCA 90 bp GTGTGGCAGAAGCAGGCTCGGAGCCGGAGGAGGGTGGCTATCGGCTTTATTCTCAGGTGCCGTGTTACATaGGGCCGAGGCTACACGGGA +
Preference number: 4 (lower is better)
Translates to: VWQKQARSRRRVAIGFILRCRVT*GRGYTG
Trigger: TCCCGTGTAGCCTCGGCCCCATGTAACACGGCACCT...GAGAATAAAGCCGATAGCCACCCTCCTCCGGCTCCGAGCCTGCTTCTGCCACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674432.1
CDS-3UTR CCA 90 bp CAGCTCGGGATGACAGAGCTTAGGGGAGATCCCGGCCTCCTGACTCTCCTGACTACAAGTGGCTGCTGCTaGAGAGGCAGCATCCGTCCC +
Preference number: 4 (lower is better)
Translates to: QLGMTELRGDPGLLTLLTTSGCC*RGSIRP
Trigger: GGGACGGATGCTGCCTCTCCAGCAGCAGCCACTTGT...AGTCAGGAGAGTCAGGAGGCCGGGATCTCCCCTAAGCTCTGTCATCCCGAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR CCA 90 bp AGGCCCTGTGGGGGTGGCATATGGCTTACATGGACAGGTGCTCATCTCTGCCCCACAAGTGGCTGCTGCTaGAGAGGCAGCATCCGTCCC +
Preference number: 4 (lower is better)
Translates to: RPCGGGIWLTWTGAHLCPTSGCC*RGSIRP
Trigger: GGGACGGATGCTGCCTCTCCAGCAGCAGCCACTTGT...GGGGCAGAGATGAGCACCTGTCCATGTAAGCCATATGCCACCCCCACAGGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR CCA 90 bp CAGCTCGGGATGACAGAGCTTAGGGGAGATCCCGGCCTCCTGACTCTCCTGACTGGCGGAAGGTTATGCTaGTTGTGGCCGAGTCGGCAC +
Preference number: 4 (lower is better)
Translates to: QLGMTELRGDPGLLTLLTGGRLC*LWPSRH
Trigger: GTGCCGACTCGGCCACAACCAGCATAACCTTCCGCC...AGTCAGGAGAGTCAGGAGGCCGGGATCTCCCCTAAGCTCTGTCATCCCGAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR CCA 90 bp GCGAGGTGTGGCAGAAGCAGGCTCGGAGCCGGAGGAGGGTGGCTATCGGCTTTACTCTGCAGCCCCAGTTaGCAGGGTTCCAAATGCCTT +
Preference number: 4 (lower is better)
Translates to: ARCGRSRLGAGGGWLSALLCSPS*QGSKCL
Trigger: AAGGCATTTGGAACCCTGCCAACTGGGGCTGCAGAG...TAAAGCCGATAGCCACCCTCCTCCGGCTCCGAGCCTGCTTCTGCCACACCTCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375144.6
CDS-3UTR CCA 90 bp GGGAAACGTTCAGGGCGACCGCATTCACGTATGTGTGGGGACGCTCATCAACAACGCAGCCCCTGGACCTaGGCTCTGCAGCCCCAGTTG +
Preference number: 4 (lower is better)
Translates to: GKRSGRPHSRMCGDAHQQRSPWT*ALQPQL
Trigger: CAACTGGGGCTGCAGAGCCCAGGTCCAGGGGCTGCG...TTGTTGATGAGCGTCCCCACACATACGTGAATGCGGTCGCCCTGAACGTTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR CCA 90 bp GTGTGTAGGTCCCTATGTCACCCTAAGCCACAAGGTGGCTTCTGGGCTTCCAAACCAGGACGCCCCCAGTaGGCGGCCAGGGAACTGCAC +
Preference number: 4 (lower is better)
Translates to: VCRSLCHPKPQGGFWASKPGRPQ*AARELH
Trigger: GTGCAGTTCCCTGGCCGCCCACTGGGGGCGTCCTGG...TTTGGAAGCCCAGAAGCCACCTTGTGGCTTAGGGTGACATAGGGACCTACACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR CCA 90 bp CGGCGGGTTGGTGAGTCCTGTTTTAGTGGGGAGGGTCTCGCGGCTCTCAGGCAGCATCTTGAGCAGACCTaGCTGCCAGGGTTTCTACGC +
Preference number: 4 (lower is better)
Translates to: RRVGESCFSGEGLAALRQHLEQT*LPGFLR
Trigger: GCGTAGAAACCCTGGCAGCCAGGTCTGCTCAAGATG...CTGCCTGAGAGCCGCGAGACCCTCCCCACTAAAACAGGACTCACCAACCCGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR CCA 90 bp CGGCGGGTTGGTGAGTCCTGTTTTAGTGGGGAGGGTCTCGCGGCTCTCAGGCAGCCGCCAGGTCTTGGCTaGATCACACGAAGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: RRVGESCFSGEGLAALRQPPGLG*ITRRRK
Trigger: CTTTCTCCTTCGTGTGATCCAGCCAAGACCTGGCGG...CTGCCTGAGAGCCGCGAGACCCTCCCCACTAAAACAGGACTCACCAACCCGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR CCA 90 bp CGGCGGCCAAAGGCATCAGCCCCCACGGCCCCCAGGCTCCAAATCTCAGCCGATACCCAGACTGAGTTCTaGCTACCGAATCCCTACAAG +
Preference number: 4 (lower is better)
Translates to: RRPKASAPTAPRLQISADTQTEF*LPNPYK
Trigger: CTTGTAGGGATTCGGTAGCCAGAACTCAGTCTGGGT...ATCGGCTGAGATTTGGAGCCTGGGGGCCGTGGGGGCTGATGCCTTTGGCCGCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR CCA 90 bp CTTCCCAGGACTGTCCCTGGCTCTGCGGCGGCCAAAGGCATCAGCCCCCACGGCGCATTCACGTATGTGTaGGGACGCTCATCAACAAAG +
Preference number: 4 (lower is better)
Translates to: LPRTVPGSAAAKGISPHGAFTYV*GRSSTK
Trigger: CTTTGTTGATGAGCGTCCCCACACATACGTGAATGC...GCCGTGGGGGCTGATGCCTTTGGCCGCCGCAGAGCCAGGGACAGTCCTGGGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR CCA 90 bp GGAGGTCAACATGGCCAGCGGGAGATGCGGCGGGCAAAGCAGCAGCGCACAGGACATCCGCTGTTAACTTaGCCCAGAAAACCCCTCAGC +
Preference number: 4 (lower is better)
Translates to: GGQHGQREMRRAKQQRTGHPLLT*PRKPLS
Trigger: GCTGAGGGGTTTTCTGGGCCAAGTTAACAGCGGATG...TCCTGTGCGCTGCTGCTTTGCCCGCCGCATCTCCCGCTGGCCATGTTGACCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR CCA 90 bp GGCCAAAGGCATCAGCCCCCACGGCCCCCAGGCTCCAAATCTCAGCCGATTCCCAGCACACTGTGTTTATaGCCCACGCAGCAGGTGCTT +
Preference number: 4 (lower is better)
Translates to: GQRHQPPRPPGSKSQPIPSTLCL*PTQQVL
Trigger: AAGCACCTGCTGCGTGGGCCATAAACACAGTGTGCT...GGGAATCGGCTGAGATTTGGAGCCTGGGGGCCGTGGGGGCTGATGCCTTTGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR CCA 90 bp GGCCAAAGGCATCAGCCCCCACGGCCCCCAGGCTCCAAATCTCAGCCGATTCCCGCGTTATCCCACCCTTaGGAGTGGGTAAGAACCAGT +
Preference number: 4 (lower is better)
Translates to: GQRHQPPRPPGSKSQPIPALSHP*EWVRTS
Trigger: ACTGGTTCTTACCCACTCCCAAGGGTGGGATAACGC...GGGAATCGGCTGAGATTTGGAGCCTGGGGGCCGTGGGGGCTGATGCCTTTGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR CCA 90 bp GGAGGTCAACATGGCCAGCGGGAGATGCGGCGGGCAAAGCAGCAGCGCACAGGAGCGTTATCCCACCCTTaGGAGTGGGTAAGAACCAGT +
Preference number: 4 (lower is better)
Translates to: GGQHGQREMRRAKQQRTGALSHP*EWVRTS
Trigger: ACTGGTTCTTACCCACTCCCAAGGGTGGGATAACGC...TCCTGTGCGCTGCTGCTTTGCCCGCCGCATCTCCCGCTGGCCATGTTGACCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR CCA 90 bp GCATCACCGTGGAGGTCAACTTGTAATGGGCGGTGCGACCGCTGGATTTCTCCTGCTACCCTGGGTTGCTaGCTGGGGACTCAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: ASPWRSTCNGRCDRWISPATLGC*LGTQAR
Trigger: CCTGGCCTGAGTCCCCAGCCAGCAACCCAGGGTAGC...AGGAGAAATCCAGCGGTCGCACCGCCCATTACAAGTTGACCTCCACGGTGATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674228.1
CDS-3UTR CCA 90 bp GGGAGAGATGGCGCTGTGCGGTCAATGATGCAGCTGTTATGTGACCTGTCGGGGCATGGACCCGCTTCCTaGGGTGAGGCTCTGGGTCAC +
Preference number: 4 (lower is better)
Translates to: GRDGAVRSMMQLLCDLSGHGPAS*GEALGH
Trigger: GTGACCCAGAGCCTCACCCCAGGAAGCGGGTCCATG...CCCCGACAGGTCACATAACAGCTGCATCATTGACCGCACAGCGCCATCTCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR CCA 90 bp TTCTCAGGGAGAGATGGCGCTGTGCGGTCAATGATGCAGCTGTTATGTGACCTGCCGCCCTTCCCTCGCTaGCTCCTAGGCGGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: FSGRDGAVRSMMQLLCDLPPFPR*LLGGLP
Trigger: AGGGAGGCCGCCTAGGAGCCAGCGAGGGAAGGGCGG...CAGGTCACATAACAGCTGCATCATTGACCGCACAGCGCCATCTCTCCCTGAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433834.5
CDS-3UTR CCA 90 bp GCTGTGCGGTCAATGATGCAGCTGTTATGTGACCTGTCGGGGAGGGAAGGGACGGTCCAGGCCATATGCTaGATCCAGGGCCTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: AVRSMMQLLCDLSGREGTVQAIC*IQGLVA
Trigger: GGCCACCAGGCCCTGGATCCAGCATATGGCCTGGAC...CGTCCCTTCCCTCCCCGACAGGTCACATAACAGCTGCATCATTGACCGCACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433834.5
CDS-3UTR CCA 90 bp TCTCACAGGCCGGGGACACCAGCCACTTTCCTGGCCCCTCAGGCAGCAGCTCAGAGGGTGTGCACTTGCTaGTTGACAGCTGTGTGTGCA +
Preference number: 4 (lower is better)
Translates to: SHRPGTPATFLAPQAAAQRVCTC*LTAVCA
Trigger: TGCACACACAGCTGTCAACCAGCAAGTGCACACCCT...CTGAGCTGCTGCCTGAGGGGCCAGGAAAGTGGCTGGTGTCCCCGGCCTGTGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674278.1
CDS-3UTR CCA 90 bp GCCTGGCCCCACTGCCCCTGCACATGCAAGGTAAGGAAGGGCCTCCTGCCTCTCATGAAGAGAAAGGGATaGCCTACTGCCTCTCCACCC +
Preference number: 4 (lower is better)
Translates to: AWPHCPCTCKVRKGLLPLMKRKG*PTASPP
Trigger: GGGTGGAGAGGCAGTAGGCCATCCCTTTCTCTTCAT...GAGAGGCAGGAGGCCCTTCCTTACCTTGCATGTGCAGGGGCAGTGGGGCCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674278.1
CDS-3UTR CCA 90 bp ATTAAAGACCCTGTCAACACAGTCTGCTCTTCCAACCCCCAACCACCAGGGGCGCCTGTGCAGCCCTCCTaGGCACAAGGGCGAGCCCAG +
Preference number: 4 (lower is better)
Translates to: IKDPVNTVCSSNPQPPGAPVQPS*AQGRAQ
Trigger: CTGGGCTCGCCCTTGTGCCCAGGAGGGCTGCACAGG...CGCCCCTGGTGGTTGGGGGTTGGAAGAGCAGACTGTGTTGACAGGGTCTTTAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674278.1
CDS-3UTR CCA 90 bp GGGAGAGATGGCGCTGTGCGGTCAATGATGCAGCTGTTATGTGACCTGTCGGGGCCCACCCCAGCTTCCTaGGTAACTGGGACCACAGGC +
Preference number: 4 (lower is better)
Translates to: GRDGAVRSMMQLLCDLSGPTPAS*VTGTTG
Trigger: GCCTGTGGTCCCAGTTACCCAGGAAGCTGGGGTGGG...CCCCGACAGGTCACATAACAGCTGCATCATTGACCGCACAGCGCCATCTCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR CAA 72 bp TGGCCTTCAAGATCCCCAAAGGCAGGGGTAGTCGTCTaGGGTCCCAGGCCCAGTGCAGCTTCATCACCTGGG +
Preference number: 4 (lower is better)
Translates to: WPSRSPKAGVVV*GPRPSAASSPG
Trigger: CCCAGGTGATGAAGCTGCACTGGGCCTGGGACCCAAGACGACTACCCCTGCCTTTGGGGATCTTGAAGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674449.1
CDS-3UTR TCA 90 bp CTGGATGTAGATCTGGCGCTGGGTCAGCACTTGAGAGAGCTCCCTCTGCAACTGCTTTCTCAGCCGAGCTaGCGGCATGGCCCCATCCTC +
Preference number: 4 (lower is better)
Translates to: LDVDLALGQHLRELPLQLLSQPS*RHGPIL
Trigger: GAGGATGGGGCCATGCCGTCAGCTCGGCTGAGAAAG...CAGTTGCAGAGGGAGCTCTCTCAAGTGCTGACCCAGCGCCAGATCTACATCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR TCA 90 bp AGAGCGAGGTGTGGCAGAAGCAGGCTCGGAGCCGGAGGAGGGTGGCTATCGGCTCTCCAGCCTTCTTTATaGGGATCACTCCAGCAAAGC +
Preference number: 4 (lower is better)
Translates to: RARCGRSRLGAGGGWLSALQPSL*GSLQQS
Trigger: GCTTTGCTGGAGTGATCCTCATAAAGAAGGCTGGAG...AGCCGATAGCCACCCTCCTCCGGCTCCGAGCCTGCTTCTGCCACACCTCGCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264202.8
ENST00000264203.7
ENST00000375142.5
ENST00000375144.6
ENST00000674449.1
CDS-3UTR TCA 90 bp GGAGGTCAACATGGCCAGCGGGAGATGCGGCGGGCAAAGCAGCAGCGCACAGGACTCCAGCCTTCTTTATaGGGATCACTCCAGCAAAGC +
Preference number: 4 (lower is better)
Translates to: GGQHGQREMRRAKQQRTGLQPSL*GSLQQS
Trigger: GCTTTGCTGGAGTGATCCTCATAAAGAAGGCTGGAG...TCCTGTGCGCTGCTGCTTTGCCCGCCGCATCTCCCGCTGGCCATGTTGACCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR TCA 90 bp ATCTTCCCAGGACTGTCCCTGGCTCTGCGGCGGCCAAAGGCATCAGCCCCCACGAAATGTGGAGAGAACTaGGAGCGAGGTGTGGCAGAA +
Preference number: 4 (lower is better)
Translates to: IFPGLSLALRRPKASAPTKCGEN*ERGVAE
Trigger: TTCTGCCACACCTCGCTCTCAGTTCTCTCCACATTT...CGTGGGGGCTGATGCCTTTGGCCGCCGCAGAGCCAGGGACAGTCCTGGGAAGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375144.6
CDS-3UTR TCA 90 bp AGAGCGAGGTGTGGCAGAAGCAGGCTCGGAGCCGGAGGAGGGTGGCTATCGGCTGCACAGTCCAGCTGCTaGTCACTCTTTCTAGGTTCT +
Preference number: 4 (lower is better)
Translates to: RARCGRSRLGAGGGWLSAAQSSC*SLFLGS
Trigger: AGAACCTAGAAAGAGTGATCAGCAGCTGGACTGTGC...AGCCGATAGCCACCCTCCTCCGGCTCCGAGCCTGCTTCTGCCACACCTCGCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264203.7
CDS-3UTR TCA 90 bp GTGCACCGACCGGGAGCACACGTGGGGGTTAGTGGTGGTTTAAATGGCCGCGGATCAGAGATCAGAGAGTaGGGTCACCCCTTCCAAGCC +
Preference number: 4 (lower is better)
Translates to: VHRPGAHVGVSGGLNGRGSEIRE*GHPFQA
Trigger: GGCTTGGAAGGGGTGACCTCACTCTCTGATCTCTGA...TCCGCGGCCATTTAAACCACCACTAACCCCCACGTGTGCTCCCGGTCGGTGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR TCA 90 bp CCTGTCACAGGTCACGAAGACCAAGCCTCCCCCAGGTGGGCAGGGGATCAGAAGCCGGACTCTCACGTTTaGTTCACACCAGCCATGGGA +
Preference number: 4 (lower is better)
Translates to: PVTGHEDQASPRWAGDQKPDSHV*FTPAMG
Trigger: TCCCATGGCTGGTGTGAATCAAACGTGAGAGTCCGG...CTTCTGATCCCCTGCCCACCTGGGGGAGGCTTGGTCTTCGTGACCTGTGACAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR TCA 90 bp CGAGGTGTGGCAGAAGCAGGCTCGGAGCCGGAGGAGGGTGGCTATCGGCTTTATAAGCATGGCTACCGCTaGGGCTGGCAGTGTGAATAC +
Preference number: 4 (lower is better)
Translates to: RGVAEAGSEPEEGGYRLYKHGYR*GWQCEY
Trigger: GTATTCACACTGCCAGCCTCAGCGGTAGCCATGCTT...ATAAAGCCGATAGCCACCCTCCTCCGGCTCCGAGCCTGCTTCTGCCACACCTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674449.1
CDS-3UTR GCA 90 bp ATCTTGAGCAGACCTGGCTGCCAGGGTTTCTACGCCAGGACGCCCCCAGTGGGCCTCCGAGGTTCATGGTaGCAGAGCCAGATTTGTTGG +
Preference number: 4 (lower is better)
Translates to: ILSRPGCQGFYARTPPVGLRGSW*QSQICW
Trigger: CCAACAAATCTGGCTCTGGCACCATGAACCTCGGAG...GCCCACTGGGGGCGTCCTGGCGTAGAAACCCTGGCAGCCAGGTCTGCTCAAGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR GCA 90 bp GCGAGGTGTGGCAGAAGCAGGCTCGGAGCCGGAGGAGGGTGGCTATCGGCTTTACTCCGAGGTTCATGGTaGCAGAGCCAGATTTGTTGG +
Preference number: 4 (lower is better)
Translates to: ARCGRSRLGAGGGWLSALLRGSW*QSQICW
Trigger: CCAACAAATCTGGCTCTGGCACCATGAACCTCGGAG...TAAAGCCGATAGCCACCCTCCTCCGGCTCCGAGCCTGCTTCTGCCACACCTCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264202.8
ENST00000264203.7
ENST00000375142.5
ENST00000375144.6
ENST00000674449.1
CDS-3UTR GCA 90 bp TTCTCAGGGAGAGATGGCGCTGTGCGGTCAATGATGCAGCTGTTATGTGACCTGTGGGACGGGAGAGTCTaGGCAGGACGGCACCGAGGG +
Preference number: 4 (lower is better)
Translates to: FSGRDGAVRSMMQLLCDLWDGRV*AGRHRG
Trigger: CCCTCGGTGCCGTCCTGCGCAGACTCTCCCGTCCCA...CAGGTCACATAACAGCTGCATCATTGACCGCACAGCGCCATCTCTCCCTGAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264202.8
ENST00000264203.7
ENST00000375142.5
CDS-3UTR GCA 90 bp AGAGCGAGGTGTGGCAGAAGCAGGCTCGGAGCCGGAGGAGGGTGGCTATCGGCTTTGTCTGCAAAAGTCTaGACAGACCTCTACCAGGCG +
Preference number: 4 (lower is better)
Translates to: RARCGRSRLGAGGGWLSALSAKV*TDLYQA
Trigger: CGCCTGGTAGAGGTCTGTGCAGACTTTTGCAGACAA...AGCCGATAGCCACCCTCCTCCGGCTCCGAGCCTGCTTCTGCCACACCTCGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264203.7
CDS-3UTR GCA 90 bp TTAACTTGGCCCAGAAAACCCCTCAGCCCGGATTGCAAAGGGCGGCACAGGACAGCCCTGCCTGCACGTTaGGCTCTGCTGTCTCGGAGA +
Preference number: 4 (lower is better)
Translates to: LTWPRKPLSPDCKGRHRTALPAR*ALLSRR
Trigger: TCTCCGAGACAGCAGAGCGCAACGTGCAGGCAGGGC...TGTCCTGTGCCGCCCTTTGCAATCCGGGCTGAGGGGTTTTCTGGGCCAAGTTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR GCA 90 bp GAGCGTGTTCTAGATTCATCATCTCAGCCGACCGTGCCTCCTCGACTGGACAAGCAGAGGCCTGCCTCCTaGTCTGTCCGCCGTGGACCT +
Preference number: 4 (lower is better)
Translates to: ERVLDSSSQPTVPPRLDKQRPAS*SVRRGP
Trigger: AGGTCCACGGCGGACAGAGCAGGAGGCAGGCCTCTG...CTTGTCCAGTCGAGGAGGCACGGTCGGCTGAGATGATGAATCTAGAACACGCTC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR GCA 90 bp CAGTGGAAAGAGTGGGTAGAGGGCTGCTCAAGAAGAGTGCTACGGAGAGTGCACGGCCTCTGCGAGGAGTaGCAGAGGCCATGCAGCTCG +
Preference number: 4 (lower is better)
Translates to: QWKEWVEGCSRRVLRRVHGLCEE*QRPCSS
Trigger: CGAGCTGCATGGCCTCTGGCACTCCTCGCAGAGGCC...GTGCACTCTCCGTAGCACTCTTCTTGAGCAGCCCTCTACCCACTCTTTCCACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR GCA 90 bp CTGCCTCCGAGGTTCATGGTGCCAGAGCCAGATTTGTTGGTCTGCAGCCACAGCCATCTCAGCCGACCGTaGCTCCTCGACTGGACAAGG +
Preference number: 4 (lower is better)
Translates to: LPPRFMVPEPDLLVCSHSHLSRP*LLDWTR
Trigger: CCTTGTCCAGTCGAGGAGGCACGGTCGGCTGAGATG...GCTGTGGCTGCAGACCAACAAATCTGGCTCTGGCACCATGAACCTCGGAGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674228.1
CDS-3UTR GCA 90 bp GCTGTGCGGTCAATGATGCAGCTGTTATGTGACCTGTCGGGGAGGGAAGGGACGAGGGGCGGAAGGTTATaGTGGTTGTGGCCGAGTCGG +
Preference number: 4 (lower is better)
Translates to: AVRSMMQLLCDLSGREGTRGGRL*WLWPSR
Trigger: CCGACTCGGCCACAACCAGCATAACCTTCCGCCCCT...CGTCCCTTCCCTCCCCGACAGGTCACATAACAGCTGCATCATTGACCGCACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR GCA 90 bp GAGCGTGTTCTAGATTCATCATCTCAGCCGACCGTGCCTCCTCGACTGGACAAGCCTGGACCTGGGCTCTaGAGCCCCAGTTGGCAGGGT +
Preference number: 4 (lower is better)
Translates to: ERVLDSSSQPTVPPRLDKPGPGL*SPSWQG
Trigger: ACCCTGCCAACTGGGGCTGCAGAGCCCAGGTCCAGG...CTTGTCCAGTCGAGGAGGCACGGTCGGCTGAGATGATGAATCTAGAACACGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR GCA 90 bp GGCGGGTTGGTGAGTCCTGTTTTAGTGGGGAGGGTCTCGCGGCTCTCAGGCAGGACCTGGTTTTCTAAGTaGCTGACCCCACCTCCACCT +
Preference number: 4 (lower is better)
Translates to: GGLVSPVLVGRVSRLSGRTWFSK*LTPPPP
Trigger: AGGTGGAGGTGGGGTCAGGCACTTAGAAAACCAGGT...CCTGCCTGAGAGCCGCGAGACCCTCCCCACTAAAACAGGACTCACCAACCCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR GCA 90 bp CAGCTCGGGATGACAGAGCTTAGGGGAGATCCCGGCCTCCTGACTCTCCTGACTGAGTGCTACGGAGAGTaGACTCAGCCGGACTCTCAC +
Preference number: 4 (lower is better)
Translates to: QLGMTELRGDPGLLTLLTECYGE*TQPDSH
Trigger: GTGAGAGTCCGGCTGAGTGCACTCTCCGTAGCACTC...AGTCAGGAGAGTCAGGAGGCCGGGATCTCCCCTAAGCTCTGTCATCCCGAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR GCA 90 bp AGGTCACCCCTTCCAAGCCAGCTAGCCCTGGACAGGCAATGTGCCGCTGAGCAGCCCACAAGTGCAAGGTaGAGCGTTATCCCACCCTTG +
Preference number: 4 (lower is better)
Translates to: RSPLPSQLALDRQCAAEQPTSAR*SVIPPL
Trigger: CAAGGGTGGGATAACGCTGCACCTTGCACTTGTGGG...CTGCTCAGCGGCACATTGCCTGTCCAGGGCTAGCTGGCTTGGAAGGGGTGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR GCA 90 bp AGCGAGGTGTGGCAGAAGCAGGCTCGGAGCCGGAGGAGGGTGGCTATCGGCTTTGGAACAAAGCCCCTCTaGTTCAGAACAGCTACCCTG +
Preference number: 4 (lower is better)
Translates to: SEVWQKQARSRRRVAIGFGTKPL*FRTATL
Trigger: CAGGGTAGCTGTTCTGAAGCAGAGGGGCTTTGTTCC...AAAGCCGATAGCCACCCTCCTCCGGCTCCGAGCCTGCTTCTGCCACACCTCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375144.6
CDS-3UTR GCA 90 bp AGGCCCTGTGGGGGTGGCATATGGCTTACATGGACAGGTGCTCATCTCTGCCCCGCTTACATGGACAGGTaGTCATCTCTGCCCCTGGCC +
Preference number: 4 (lower is better)
Translates to: RPCGGGIWLTWTGAHLCPAYMDR*SSLPLA
Trigger: GGCCAGGGGCAGAGATGAGCACCTGTCCATGTAAGC...GGGGCAGAGATGAGCACCTGTCCATGTAAGCCATATGCCACCCCCACAGGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR GCA 90 bp GCCAAGCAACCTCGAATCAGCGCTTGGAGACAGTGCTCGACTCTGTGGGAGGGAGCCTGGCTGATTTGCTaGATGGACCCGCTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: AKQPRISAWRQCSTLWEGAWLIC*MDPLPG
Trigger: CCCAGGAAGCGGGTCCATGCAGCAAATCAGCCAGGC...TCCCTCCCACAGAGTCGAGCACTGTCTCCAAGCGCTGATTCGAGGTTGCTTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR GCA 90 bp CAGCTCGGGATGACAGAGCTTAGGGGAGATCCCGGCCTCCTGACTCTCCTGACTGGGCCACCATGCCAGTaGCTGGCTGATTTGCTGCAT +
Preference number: 4 (lower is better)
Translates to: QLGMTELRGDPGLLTLLTGPPCQ*LADLLH
Trigger: ATGCAGCAAATCAGCCAGGCACTGGCATGGTGGCCC...AGTCAGGAGAGTCAGGAGGCCGGGATCTCCCCTAAGCTCTGTCATCCCGAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR GCA 90 bp GCTGTGCGGTCAATGATGCAGCTGTTATGTGACCTGTCGGGGAGGGAAGGGACGCGTGTCCAGGCCATATaGTGGATCCAGGGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: AVRSMMQLLCDLSGREGTRVQAI*WIQGLV
Trigger: CACCAGGCCCTGGATCCAGCATATGGCCTGGACACG...CGTCCCTTCCCTCCCCGACAGGTCACATAACAGCTGCATCATTGACCGCACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433834.5
CDS-3UTR GCA 90 bp TCTCACAGGCCGGGGACACCAGCCACTTTCCTGGCCCCTCAGGCAGCAGCTCAGTTGCTGCTCTGCTCCTaGTCTGTAAGGACTGCACTT +
Preference number: 4 (lower is better)
Translates to: SHRPGTPATFLAPQAAAQLLLCS*SVRTAL
Trigger: AAGTGCAGTCCTTACAGAGCAGGAGCAGAGCAGCAA...CTGAGCTGCTGCCTGAGGGGCCAGGAAAGTGGCTGGTGTCCCCGGCCTGTGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674278.1
CDS-3UTR GCA 90 bp AAGGGGCACCAGTCTCAGGGCCTTAGACAGGTGAGTTTGCCCCTGCCTCAGAGACCCACTACACACTGTTaGAGACCCTCGGGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: KGHQSQGLRQVSLPLPQRPTTHC*RPSGSG
Trigger: CCCAGACCCCGAGGGTCTGCAACAGTGTGTAGTGGG...TCTCTGAGGCAGGGGCAAACTCACCTGTCTAAGGCCCTGAGACTGGTGCCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000674278.1
CDS-3UTR GCA 90 bp GCCTGGCCCCACTGCCCCTGCACATGCAAGGTAAGGAAGGGCCTCCTGCCTCTCAGCCGACAACAAACATaGCCACAGACAGCAAGTCCA +
Preference number: 4 (lower is better)
Translates to: AWPHCPCTCKVRKGLLPLSRQQT*PQTASP
Trigger: TGGACTTGCTGTCTGTGGGCATGTTTGTTGTCGGCT...GAGAGGCAGGAGGCCCTTCCTTACCTTGCATGTGCAGGGGCAGTGGGGCCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674278.1
CDS-3UTR CCA 90 bp CTGGCTGCCAGGGTTTCTACGCCAGGACGCCCCCAGTGGGCGGCCAGGGAACTGGCAATTTTCAGTGGCTaGTCAACAGAAGACAGGAGA +
Preference number: 4 (lower is better)
Translates to: LAARVSTPGRPQWAARELAIFSG*STEDRR
Trigger: TCTCCTGTCTTCTGTTGACCAGCCACTGAAAATTGC...CAGTTCCCTGGCCGCCCACTGGGGGCGTCCTGGCGTAGAAACCCTGGCAGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674432.1
CDS-3UTR CCA 90 bp AGCGAGGTGTGGCAGAAGCAGGCTCGGAGCCGGAGGAGGGTGGCTATCGGCTTTTGCACTTCTACCACGTaGATGGAATCCCAGCAGCCT +
Preference number: 4 (lower is better)
Translates to: SEVWQKQARSRRRVAIGFCTSTT*MESQQP
Trigger: AGGCTGCTGGGATTCCATCCACGTGGTAGAAGTGCA...AAAGCCGATAGCCACCCTCCTCCGGCTCCGAGCCTGCTTCTGCCACACCTCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264202.8
ENST00000264203.7
ENST00000375142.5
ENST00000375144.6
ENST00000674449.1
CDS-3UTR CCA 90 bp GTGTGGCAGAAGCAGGCTCGGAGCCGGAGGAGGGTGGCTATCGGCTTTATTCTCGGGCGGTGCGACCGCTaGATTTCTCCTGCACTTCTA +
Preference number: 4 (lower is better)
Translates to: VWQKQARSRRRVAIGFILGRCDR*ISPALL
Trigger: TAGAAGTGCAGGAGAAATCCAGCGGTCGCACCGCCC...GAGAATAAAGCCGATAGCCACCCTCCTCCGGCTCCGAGCCTGCTTCTGCCACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264202.8
ENST00000264203.7
ENST00000375142.5
ENST00000375144.6
ENST00000674432.1
ENST00000674449.1
CDS-3UTR CCA 90 bp CAGCTCGGGATGACAGAGCTTAGGGGAGATCCCGGCCTCCTGACTCTCCTGACTGGGCGGTGCGACCGCTaGATTTCTCCTGCACTTCTA +
Preference number: 4 (lower is better)
Translates to: QLGMTELRGDPGLLTLLTGRCDR*ISPALL
Trigger: TAGAAGTGCAGGAGAAATCCAGCGGTCGCACCGCCC...AGTCAGGAGAGTCAGGAGGCCGGGATCTCCCCTAAGCTCTGTCATCCCGAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR CCA 90 bp GCGAGGTGTGGCAGAAGCAGGCTCGGAGCCGGAGGAGGGTGGCTATCGGCTTTAGCCACAGCATCACCGTaGAGGTCAACTTGTAATGGG +
Preference number: 4 (lower is better)
Translates to: ARCGRSRLGAGGGWLSALATASP*RSTCNG
Trigger: CCCATTACAAGTTGACCTCCACGGTGATGCTGTGGC...TAAAGCCGATAGCCACCCTCCTCCGGCTCCGAGCCTGCTTCTGCCACACCTCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264202.8
ENST00000264203.7
ENST00000375142.5
ENST00000375144.6
ENST00000674449.1
CDS-3UTR CCA 90 bp TCATGTCAGAGGCCTGCCTCCTGCTCTGTCCGCCGTGGACCTGGAGGGTCCAGATGCCTCCGAGGTTCATaGTGCCAGAGCCAGATTTGT +
Preference number: 4 (lower is better)
Translates to: SCQRPASCSVRRGPGGSRCLRGS*CQSQIC
Trigger: ACAAATCTGGCTCTGGCACCATGAACCTCGGAGGCA...TCTGGACCCTCCAGGTCCACGGCGGACAGAGCAGGAGGCAGGCCTCTGACATGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR CCA 90 bp GGCCAAAGGCATCAGCCCCCACGGCCCCCAGGCTCCAAATCTCAGCCGATTCCCGATGTTGGCTATGTGTaGGGAGCAGTCACTCACAGT +
Preference number: 4 (lower is better)
Translates to: GQRHQPPRPPGSKSQPIPDVGYV*GAVTHS
Trigger: ACTGTGAGTGACTGCTCCCCACACATAGCCAACATC...GGGAATCGGCTGAGATTTGGAGCCTGGGGGCCGTGGGGGCTGATGCCTTTGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR CCA 90 bp GGAGGTCAACATGGCCAGCGGGAGATGCGGCGGGCAAAGCAGCAGCGCACAGGAATTCTCAGGGAGAGATaGCGCTGTGCGGTCAATGAT +
Preference number: 4 (lower is better)
Translates to: GGQHGQREMRRAKQQRTGILRER*RCAVND
Trigger: ATCATTGACCGCACAGCGCCATCTCTCCCTGAGAAT...TCCTGTGCGCTGCTGCTTTGCCCGCCGCATCTCCCGCTGGCCATGTTGACCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR CCA 90 bp GAGGTAGACAAGGCCCCAGGTGGCCTCCACACAGCCGGTGAAGGGAGCTGGTGCATTCTCAGGGAGAGATaGCGCTGTGCGGTCAATGAT +
Preference number: 4 (lower is better)
Translates to: EVDKAPGGLHTAGEGSWCILRER*RCAVND
Trigger: ATCATTGACCGCACAGCGCCATCTCTCCCTGAGAAT...GCACCAGCTCCCTTCACCGGCTGTGTGGAGGCCACCTGGGGCCTTGTCTACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674449.1
CDS-3UTR CCA 90 bp CCTGTCACAGGTCACGAAGACCAAGCCTCCCCCAGGTGGGCAGGGGATCAGAAGGGAGCCGGAGGAGGGTaGCTATCGGCTTTATTCTCA +
Preference number: 4 (lower is better)
Translates to: PVTGHEDQASPRWAGDQKGAGGG*LSALFS
Trigger: TGAGAATAAAGCCGATAGCCACCCTCCTCCGGCTCC...CTTCTGATCCCCTGCCCACCTGGGGGAGGCTTGGTCTTCGTGACCTGTGACAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375144.6
CDS-3UTR CCA 90 bp CGAGGTGTGGCAGAAGCAGGCTCGGAGCCGGAGGAGGGTGGCTATCGGCTTTATGAAGAGGAAATGCACTaGCCTGGCGAGATGCGAGTC +
Preference number: 4 (lower is better)
Translates to: RGVAEAGSEPEEGGYRLYEEEMH*PGEMRV
Trigger: GACTCGCATCTCGCCAGGCCAGTGCATTTCCTCTTC...ATAAAGCCGATAGCCACCCTCCTCCGGCTCCGAGCCTGCTTCTGCCACACCTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264203.7
CDS-3UTR CCA 90 bp GTTCAGGGCGACCGCATTCACGTATGTGTGGGGACGCTCATCAACAAAGCCAGACCCCCAGCTGGGCTCTaGCCTCATGTCAGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: VQGDRIHVCVGTLINKARPPAGL*PHVRGL
Trigger: CAGGCCTCTGACATGAGGCCAGAGCCCAGCTGGGGG...TCTGGCTTTGTTGATGAGCGTCCCCACACATACGTGAATGCGGTCGCCCTGAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR CCA 90 bp AGGCCCTGTGGGGGTGGCATATGGCTTACATGGACAGGTGCTCATCTCTGCCCCTTTACTGCCCCCAGCTaGGCTCTGGCCTCATGTCAG +
Preference number: 4 (lower is better)
Translates to: RPCGGGIWLTWTGAHLCPFTAPS*ALASCQ
Trigger: CTGACATGAGGCCAGAGCCCAGCTGGGGGCAGTAAA...GGGGCAGAGATGAGCACCTGTCCATGTAAGCCATATGCCACCCCCACAGGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR CCA 90 bp GGCGCTGTGCGGTCAATGATGCAGCTGTTATGTGACCTGTCGGGGAGGGAAGGGAACGCCAGGGACCACTaGGCTCTAACCCTGTCACAG +
Preference number: 4 (lower is better)
Translates to: GAVRSMMQLLCDLSGREGNARDH*ALTLSQ
Trigger: CTGTGACAGGGTTAGAGCCCAGTGGTCCCTGGCGTT...CCCTTCCCTCCCCGACAGGTCACATAACAGCTGCATCATTGACCGCACAGCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR CCA 90 bp GAGTGGAAAGCACACACACGTGATAGGTGCCGTGTTACATGGGGCCGAGGCTACGGTCCACGCTGGCGGTaGTCGTGGTATTCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: EWKAHTRDRCRVTWGRGYGPRWR*SWYSGA
Trigger: AGCCCCTGAATACCACGACCACCGCCAGCGTGGACC...GTAGCCTCGGCCCCATGTAACACGGCACCTATCACGTGTGTGTGCTTTCCACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR CCA 90 bp GGGAGAGATGGCGCTGTGCGGTCAATGATGCAGCTGTTATGTGACCTGTCGGGGAGGTGCCGTGTTACATaGGGCCGAGGCTACACGGGA +
Preference number: 4 (lower is better)
Translates to: GRDGAVRSMMQLLCDLSGRCRVT*GRGYTG
Trigger: TCCCGTGTAGCCTCGGCCCCATGTAACACGGCACCT...CCCCGACAGGTCACATAACAGCTGCATCATTGACCGCACAGCGCCATCTCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR CCA 90 bp ACAGGTCACGAAGACCAAGCCTCCCCCAGGTGGGCAGGGGATCAGAAGACAAGGGCAGCATCCGTCCCTTaGCCTGGGCTTCTTCAGAAG +
Preference number: 4 (lower is better)
Translates to: TGHEDQASPRWAGDQKTRAASVP*PGLLQK
Trigger: CTTCTGAAGAAGCCCAGGCCAAGGGACGGATGCTGC...CCTTGTCTTCTGATCCCCTGCCCACCTGGGGGAGGCTTGGTCTTCGTGACCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR CCA 90 bp GATGGCGCTGTGCGGTCAATGATGCAGCTGTTATGTGACCTGTCGGGGAGGGAAGCCGGTGCACACAAGTaGCTGCTGCTGGAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: DGAVRSMMQLLCDLSGREAGAHK*LLLERQ
Trigger: CTGCCTCTCCAGCAGCAGCCACTTGTGTGCACCGGC...TTCCCTCCCCGACAGGTCACATAACAGCTGCATCATTGACCGCACAGCGCCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR CCA 90 bp CTTGCCAGGCCCTGTGGGGGTGGCATATGGCTTACATGGACAGGTGCTCATCTCAGGTTATGCTGGTTGTaGCCGAGTCGGCACTGGGCG +
Preference number: 4 (lower is better)
Translates to: LARPCGGGIWLTWTGAHLRLCWL*PSRHWA
Trigger: CGCCCAGTGCCGACTCGGCCACAACCAGCATAACCT...GAGATGAGCACCTGTCCATGTAAGCCATATGCCACCCCCACAGGGCCTGGCAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR CCA 90 bp TTTAAGGGACAATGCTTGGGAAGGTCACGGCCAAGCAACCTCGAATCAGCGCTTCCAGGACGCCCCCAGTaGGCGGCCAGGGAACTGCAC +
Preference number: 4 (lower is better)
Translates to: FKGQCLGRSRPSNLESALPGRPQ*AARELH
Trigger: GTGCAGTTCCCTGGCCGCCCACTGGGGGCGTCCTGG...AAGCGCTGATTCGAGGTTGCTTGGCCGTGACCTTCCCAAGCATTGTCCCTTAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR CCA 90 bp CCACAAGTGCAAGGTGCAGCGTTATCCCACCCTTGGGAGTGGGTAAGAACCAGTAGCGGGAGGTCAACATaGCCAGCGGGAGATGCGGCG +
Preference number: 4 (lower is better)
Translates to: PQVQGAALSHPWEWVRTSSGRST*PAGDAA
Trigger: CGCCGCATCTCCCGCTGGCCATGTTGACCTCCCGCT...ACTGGTTCTTACCCACTCCCAAGGGTGGGATAACGCTGCACCTTGCACTTGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR CCA 90 bp GCCCGCCAGGTCTTGGCTGGATCACACGAAGGAGAAAGTTCCAGAGCTAGAATCTCCCAGGACTGTCCCTaGCTCTGCGGCGGCCAAAGG +
Preference number: 4 (lower is better)
Translates to: ARQVLAGSHEGESSRARISQDCP*LCGGQR
Trigger: CCTTTGGCCGCCGCAGAGCCAGGGACAGTCCTGGGA...GATTCTAGCTCTGGAACTTTCTCCTTCGTGTGATCCAGCCAAGACCTGGCGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR CCA 90 bp CCCGCCAGGTCTTGGCTGGATCACACGAAGGAGAAAGTTCCAGAGCTAGAATCACCCTGGGTTGCTGGCTaGGGACTCAGGCCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: PARSWLDHTKEKVPELESPWVAG*GLRPGA
Trigger: AGCCCCTGGCCTGAGTCCCCAGCCAGCAACCCAGGG...TGATTCTAGCTCTGGAACTTTCTCCTTCGTGTGATCCAGCCAAGACCTGGCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR CCA 90 bp ACACCGAGGCCCAAGACCACACAGCTAGTAACTGGCAGAGCCAGGGTTCAAATCGCTACCCTGGGTTGCTaGCTGGGGACTCAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: TPRPKTTQLVTGRARVQIATLGC*LGTQAR
Trigger: CCTGGCCTGAGTCCCCAGCCAGCAACCCAGGGTAGC...GATTTGAACCCTGGCTCTGCCAGTTACTAGCTGTGTGGTCTTGGGCCTCGGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR CCA 90 bp TTCTCAGGGAGAGATGGCGCTGTGCGGTCAATGATGCAGCTGTTATGTGACCTGGCTCATCTCTGCCCCTaGCCACCGGTGACCCGGCCA +
Preference number: 4 (lower is better)
Translates to: FSGRDGAVRSMMQLLCDLAHLCP*PPVTRP
Trigger: TGGCCGGGTCACCGGTGGCCAGGGGCAGAGATGAGC...CAGGTCACATAACAGCTGCATCATTGACCGCACAGCGCCATCTCTCCCTGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR CCA 90 bp GCTGTGCGGTCAATGATGCAGCTGTTATGTGACCTGTCGGGGAGGGAAGGGACGTTCATCCTTGTCCTGTaGGCCACCCATCCTCGCCCC +
Preference number: 4 (lower is better)
Translates to: AVRSMMQLLCDLSGREGTFILVL*ATHPRP
Trigger: GGGGCGAGGATGGGTGGCCCACAGGACAAGGATGAA...CGTCCCTTCCCTCCCCGACAGGTCACATAACAGCTGCATCATTGACCGCACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433834.5
CDS-3UTR CCA 90 bp GAGAAAGGGATGGCCTACTGCCTCTCCACCCCATGGAACAGCCTGGTCCCTAGACAGACCCTCGGGGTCTaGGTTATCCAGTTCGACCCC +
Preference number: 4 (lower is better)
Translates to: EKGMAYCLSTPWNSLVPRQTLGV*VIQFDP
Trigger: GGGGTCGAACTGGATAACCCAGACCCCGAGGGTCTG...TCTAGGGACCAGGCTGTTCCATGGGGTGGAGAGGCAGTAGGCCATCCCTTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674278.1
CDS-3UTR CCA 90 bp GAGGTAGACAAGGCCCCAGGTGGCCTCCACACAGCCGGTGAAGGGAGCTGGTGCGTAATCAGACCATGGTaGACTGGATCCATTCCCCCA +
Preference number: 4 (lower is better)
Translates to: EVDKAPGGLHTAGEGSWCVIRPW*TGSIPP
Trigger: TGGGGGAATGGATCCAGTCCACCATGGTCTGATTAC...GCACCAGCTCCCTTCACCGGCTGTGTGGAGGCCACCTGGGGCCTTGTCTACCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674449.1
3UTR CAA 72 bp TGGGAAGGTCACGGCCAAGCAACCTCGAATCAGCGCTaGGAGACAGTGCTCGACTCTGTGGGAGGGAGGAGT +
Preference number: 4 (lower is better)
Translates to: WEGHGQATSNQR*ETVLDSVGGRS
Trigger: ACTCCTCCCTCCCACAGAGTCGAGCACTGTCTCCAAGCGCTGATTCGAGGTTGCTTGGCCGTGACCTTCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
3UTR CAA 72 bp AGGCTGCCTCCGAGGTTCATGGTGCCAGAGCCAGATTaGTTGGTCTGCAGCCACAGCATCACCGTGGAGGTC +
Preference number: 4 (lower is better)
Translates to: RLPPRFMVPEPD*LVCSHSITVEV
Trigger: GACCTCCACGGTGATGCTGTGGCTGCAGACCAACAAATCTGGCTCTGGCACCATGAACCTCGGAGGCAGCCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674228.1
ENST00000674449.1
CDS-3UTR TCA 90 bp CAGTGGAAAGAGTGGGTAGAGGGCTGCTCAAGAAGAGTGCTACGGAGAGTGCACGCACAGTCCAGCTGCTaGTCACTCATGGTGGCGGCG +
Preference number: 4 (lower is better)
Translates to: QWKEWVEGCSRRVLRRVHAQSSC*SLMVAA
Trigger: CGCCGCCACCATGAGTGATCAGCAGCTGGACTGTGC...GTGCACTCTCCGTAGCACTCTTCTTGAGCAGCCCTCTACCCACTCTTTCCACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674432.1
CDS-3UTR TCA 90 bp TCATGTCAGAGGCCTGCCTCCTGCTCTGTCCGCCGTGGACCTGGAGGGTCCAGAGGTCGATCAGGTCGCTaGGGTTTTTCTCGATTTGCT +
Preference number: 4 (lower is better)
Translates to: SCQRPASCSVRRGPGGSRGRSGR*GFSRFA
Trigger: AGCAAATCGAGAAAAACCTCAGCGACCTGATCGACC...TCTGGACCCTCCAGGTCCACGGCGGACAGAGCAGGAGGCAGGCCTCTGACATGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR TCA 90 bp CGTGGGACGGGAGAGTCTGCGCAGGACGGCACCGAGGGCCACCTCTGCTCCCAGCGTTCAGCGTACTTCTaGTTTTATTTTCCATGTCCT +
Preference number: 4 (lower is better)
Translates to: RGTGESAQDGTEGHLCSQRSAYF*FYFPCP
Trigger: AGGACATGGAAAATAAAATCAGAAGTACGCTGAACG...CTGGGAGCAGAGGTGGCCCTCGGTGCCGTCCTGCGCAGACTCTCCCGTCCCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264202.8
ENST00000375142.5
CDS-3UTR TCA 90 bp GCTGTGCGGTCAATGATGCAGCTGTTATGTGACCTGTCGGGGAGGGAAGGGACGGATGCAGCTGTTATGTaGCCTGTCGGGGAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: AVRSMMQLLCDLSGREGTDAAVM*PVGEGR
Trigger: CCTTCCCTCCCCGACAGGTCACATAACAGCTGCATC...CGTCCCTTCCCTCCCCGACAGGTCACATAACAGCTGCATCATTGACCGCACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000264202.8
ENST00000264203.7
ENST00000375142.5
ENST00000375144.6
ENST00000433834.5
ENST00000674228.1
ENST00000674432.1
ENST00000674449.1
CDS-3UTR TCA 90 bp GGCGCTGTGCGGTCAATGATGCAGCTGTTATGTGACCTGTCGGGGAGGGAAGGGGCGCTGTGCGGTCAATaGTGCAGCTGTTATGTGACC +
Preference number: 4 (lower is better)
Translates to: GAVRSMMQLLCDLSGREGALCGQ*CSCYVT
Trigger: GGTCACATAACAGCTGCATCATTGACCGCACAGCGC...CCCTTCCCTCCCCGACAGGTCACATAACAGCTGCATCATTGACCGCACAGCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000264202.8
ENST00000264203.7
ENST00000375142.5
ENST00000375144.6
ENST00000433834.5
ENST00000674228.1
ENST00000674432.1
ENST00000674449.1
CDS-3UTR TCA 90 bp AGAGCGAGGTGTGGCAGAAGCAGGCTCGGAGCCGGAGGAGGGTGGCTATCGGCTGCATTCCATAGAAATTaGCAGAAAAGCACCTGGCCG +
Preference number: 4 (lower is better)
Translates to: RARCGRSRLGAGGGWLSAAFHRN*QKSTWP
Trigger: CGGCCAGGTGCTTTTCTGTCAATTTCTATGGAATGC...AGCCGATAGCCACCCTCCTCCGGCTCCGAGCCTGCTTCTGCCACACCTCGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264202.8
ENST00000264203.7
ENST00000375142.5
CDS-3UTR TCA 90 bp ATATGGCTTACATGGACAGGTGCTCATCTCTGCCCCTGGCCACCGGTGACCCGGTTTTTGAGCGGGGACTaGCAAACTGCAGGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: IWLTWTGAHLCPWPPVTRFLSGD*QTAGLR
Trigger: CCTCAGCCCTGCAGTTTGTCAGTCCCCGCTCAAAAA...CCGGGTCACCGGTGGCCAGGGGCAGAGATGAGCACCTGTCCATGTAAGCCATAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR TCA 90 bp GCTGATTTGCTGCATGGACCCGCTTCCTGGGGTGAGGCTCTGGGTCACTGGGCTTGTAAAGCAGGTGACTaGAATCTGTCGCCCACCCCA +
Preference number: 4 (lower is better)
Translates to: ADLLHGPASWGEALGHWACKAGD*NLSPTP
Trigger: TGGGGTGGGCGACAGATTTCAGTCACCTGCTTTACA...AGCCCAGTGACCCAGAGCCTCACCCCAGGAAGCGGGTCCATGCAGCAAATCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR TCA 90 bp ATATGGCTTACATGGACAGGTGCTCATCTCTGCCCCTGGCCACCGGTGACCCGGCCGGACTCTCACGTTTaGTTCACACCAGCCATGGGA +
Preference number: 4 (lower is better)
Translates to: IWLTWTGAHLCPWPPVTRPDSHV*FTPAMG
Trigger: TCCCATGGCTGGTGTGAATCAAACGTGAGAGTCCGG...CCGGGTCACCGGTGGCCAGGGGCAGAGATGAGCACCTGTCCATGTAAGCCATAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR TCA 90 bp CCCTGTGGGGGTGGCATATGGCTTACATGGACAGGTGCTCATCTCTGCCCCTGGGCGTTATCAGCAGATTaGACAGGGACTGGTGAGGCG +
Preference number: 4 (lower is better)
Translates to: PCGGGIWLTWTGAHLCPWALSAD*TGTGEA
Trigger: CGCCTCACCAGTCCCTGTTCAATCTGCTGATAACGC...CCAGGGGCAGAGATGAGCACCTGTCCATGTAAGCCATATGCCACCCCCACAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR TCA 90 bp GCCTGGCCCCACTGCCCCTGCACATGCAAGGTAAGGAAGGGCCTCCTGCCTCTCACCTTCAAACTTAGCTaGAAGGGCAGGCTGTATTCC +
Preference number: 4 (lower is better)
Translates to: AWPHCPCTCKVRKGLLPLTFKLS*KGRLYS
Trigger: GGAATACAGCCTGCCCTTTCAGCTAAGTTTGAAGGT...GAGAGGCAGGAGGCCCTTCCTTACCTTGCATGTGCAGGGGCAGTGGGGCCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674278.1
CDS-3UTR TCA 90 bp GAGAAAGGGATGGCCTACTGCCTCTCCACCCCATGGAACAGCCTGGTCCCTAGATGGGGTTGGTGGTCATaGGGCTGGAGCTCAAGCCAA +
Preference number: 4 (lower is better)
Translates to: EKGMAYCLSTPWNSLVPRWGWWS*GWSSSQ
Trigger: TTGGCTTGAGCTCCAGCCTCATGACCACCAACCCCA...TCTAGGGACCAGGCTGTTCCATGGGGTGGAGAGGCAGTAGGCCATCCCTTTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674278.1
CDS-3UTR TCA 90 bp GAGGTAGACAAGGCCCCAGGTGGCCTCCACACAGCCGGTGAAGGGAGCTGGTGCCTGTTGCTTTCAGTGTaGCTAACCCAAAGGAACCTG +
Preference number: 4 (lower is better)
Translates to: EVDKAPGGLHTAGEGSWCLLLSV*LTQRNL
Trigger: CAGGTTCCTTTGGGTTAGTCACACTGAAAGCAACAG...GCACCAGCTCCCTTCACCGGCTGTGTGGAGGCCACCTGGGGCCTTGTCTACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674449.1
CDS-3UTR TCA 90 bp GCTGTGCGGTCAATGATGCAGCTGTTATGTGACCTGTCGGGGAGGGAAGGGACGCTCTTGTTCAGCCTCTaGGGTAGACAAGGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: AVRSMMQLLCDLSGREGTLLFSL*GRQGPR
Trigger: CCTGGGGCCTTGTCTACCTCAGAGGCTGAACAAGAG...CGTCCCTTCCCTCCCCGACAGGTCACATAACAGCTGCATCATTGACCGCACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674449.1
CDS-3UTR GCA 90 bp GGGAGGAGTCATCTTGAGCAGACCTGGCTGCCAGGGTTTCTACGCCAGGACGCCACTTGTAATGGGCGGTaGGACCGCTGGATTTCTCCT +
Preference number: 4 (lower is better)
Translates to: GRSHLEQTWLPGFLRQDATCNGR*DRWISP
Trigger: AGGAGAAATCCAGCGGTCGCACCGCCCATTACAAGT...GGCGTCCTGGCGTAGAAACCCTGGCAGCCAGGTCTGCTCAAGATGACTCCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR GCA 90 bp GCAGCCGGGCTGCCCGGAATGTGGTGTCATGGCTCCCCTAGGCCCAGGCTGGAGAGCTCCCTCTGCAACTaGTTAAACTTTTGGTTGTCA +
Preference number: 4 (lower is better)
Translates to: AAGLPGMWCHGSPRPRLESSLCN*LNFWLS
Trigger: TGACAACCAAAAGTTTAAGCAGTTGCAGAGGGAGCT...CTCCAGCCTGGGCCTAGGGGAGCCATGACACCACATTCCGGGCAGCCCGGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR GCA 90 bp GGGAAACGTTCAGGGCGACCGCATTCACGTATGTGTGGGGACGCTCATCAACAACTGGACAAGGGCCTCTaGGAGGAGTGCCAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: GKRSGRPHSRMCGDAHQQLDKGL*EECQRP
Trigger: TGGCCTCTGGCACTCCTCGCAGAGGCCCTTGTCCAG...TTGTTGATGAGCGTCCCCACACATACGTGAATGCGGTCGCCCTGAACGTTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR GCA 90 bp GCTGATTTGCTGCATGGACCCGCTTCCTGGGGTGAGGCTCTGGGTCACTGGGCTACGGTGCTGCTGGACTaGAGAGCGTGTTCTAGATTC +
Preference number: 4 (lower is better)
Translates to: ADLLHGPASWGEALGHWATVLLD*RACSRF
Trigger: GAATCTAGAACACGCTCTGCAGTCCAGCAGCACCGT...AGCCCAGTGACCCAGAGCCTCACCCCAGGAAGCGGGTCCATGCAGCAAATCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR GCA 90 bp ACACCGAGGCCCAAGACCACACAGCTAGTAACTGGCAGAGCCAGGGTTCAAATCACTGCCTGGGGACTGTaGAGGTTGGCTGGGCGGGAA +
Preference number: 4 (lower is better)
Translates to: TPRPKTTQLVTGRARVQITAWGL*RLAGRE
Trigger: TTCCCGCCCAGCCAACCTGCACAGTCCCCAGGCAGT...GATTTGAACCCTGGCTCTGCCAGTTACTAGCTGTGTGGTCTTGGGCCTCGGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR GCA 90 bp CTGATTTGCTGCATGGACCCGCTTCCTGGGGTGAGGCTCTGGGTCACTGGGCTGGCTGCTCAAGAAGAGTaGTACGGAGAGTGCACTCAG +
Preference number: 4 (lower is better)
Translates to: LICCMDPLPGVRLWVTGLAAQEE*YGECTQ
Trigger: CTGAGTGCACTCTCCGTAGCACTCTTCTTGAGCAGC...CAGCCCAGTGACCCAGAGCCTCACCCCAGGAAGCGGGTCCATGCAGCAAATCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR GCA 90 bp GGGAGAGATGGCGCTGTGCGGTCAATGATGCAGCTGTTATGTGACCTGTCGGGGGTGCTTTCAGGCCTCTaGTGTGAGGCACCATCCGCT +
Preference number: 4 (lower is better)
Translates to: GRDGAVRSMMQLLCDLSGVLSGL*CEAPSA
Trigger: AGCGGATGGTGCCTCACAGCAGAGGCCTGAAAGCAC...CCCCGACAGGTCACATAACAGCTGCATCATTGACCGCACAGCGCCATCTCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR GCA 90 bp GGGAGGAGTCATCTTGAGCAGACCTGGCTGCCAGGGTTTCTACGCCAGGACGCCGGAACAAAGCCCCTCTaGTTCAGAACAGCTACCCTG +
Preference number: 4 (lower is better)
Translates to: GRSHLEQTWLPGFLRQDAGTKPL*FRTATL
Trigger: CAGGGTAGCTGTTCTGAAGCAGAGGGGCTTTGTTCC...GGCGTCCTGGCGTAGAAACCCTGGCAGCCAGGTCTGCTCAAGATGACTCCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR GCA 90 bp GTAGAGGGCTGCTCAAGAAGAGTGCTACGGAGAGTGCACTCAGCCGGACTCTCAGCCTGGCTGATTTGCTaGATGGACCCGCTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: VEGCSRRVLRRVHSAGLSAWLIC*MDPLPG
Trigger: CCCAGGAAGCGGGTCCATGCAGCAAATCAGCCAGGC...TGAGAGTCCGGCTGAGTGCACTCTCCGTAGCACTCTTCTTGAGCAGCCCTCTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR GCA 90 bp ATATGGCTTACATGGACAGGTGCTCATCTCTGCCCCTGGCCACCGGTGACCCGGAGTGCCTGGCTGATTTaGTGCATGGACCCGCTTCCT +
Preference number: 4 (lower is better)
Translates to: IWLTWTGAHLCPWPPVTRSAWLI*CMDPLP
Trigger: AGGAAGCGGGTCCATGCAGCAAATCAGCCAGGCACT...CCGGGTCACCGGTGGCCAGGGGCAGAGATGAGCACCTGTCCATGTAAGCCATAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR GCA 90 bp TTCTCAGGGAGAGATGGCGCTGTGCGGTCAATGATGCAGCTGTTATGTGACCTGTTCTGGGCACACCGATaGCCGCCCTTCCCTCGCTGG +
Preference number: 4 (lower is better)
Translates to: FSGRDGAVRSMMQLLCDLFWAHR*PPFPRW
Trigger: CCAGCGAGGGAAGGGCGGGCATCGGTGTGCCCAGAA...CAGGTCACATAACAGCTGCATCATTGACCGCACAGCGCCATCTCTCCCTGAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433834.5
CDS-3UTR GCA 90 bp GCTGTGCGGTCAATGATGCAGCTGTTATGTGACCTGTCGGGGAGGGAAGGGACGCTGCGCCTGCTTGGGTaGATCGTGTCCAGGCCATAT +
Preference number: 4 (lower is better)
Translates to: AVRSMMQLLCDLSGREGTLRLLG*IVSRPY
Trigger: ATATGGCCTGGACACGATGCACCCAAGCAGGCGCAG...CGTCCCTTCCCTCCCCGACAGGTCACATAACAGCTGCATCATTGACCGCACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433834.5
CDS-3UTR GCA 90 bp CCAGGAGAGAGAGCTCTTCAGCACACTCCGATGGCACTGGGTGAGTCAAAATTCTCCCTGGAGGCTGGCTaGAGCACAGTGTCCCCACGG +
Preference number: 4 (lower is better)
Translates to: PGERALQHTPMALGESKFSLEAG*STVSPR
Trigger: CCGTGGGGACACTGTGCTGCAGCCAGCCTCCAGGGA...GAATTTTGACTCACCCAGTGCCATCGGAGTGTGCTGAAGAGCTCTCTCTCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674278.1
CDS-3UTR GCA 90 bp ACACGGCCAGTGCCTGTGGGTGCTACGTCAGCCGACAACAAACATGCCCACAGAGCCAGTGCCTGTGGGTaGTACGTCAGCCGACAACAA +
Preference number: 4 (lower is better)
Translates to: TRPVPVGATSADNKHAHRASACG*YVSRQQ
Trigger: TTGTTGTCGGCTGACGTAGCACCCACAGGCACTGGC...TCTGTGGGCATGTTTGTTGTCGGCTGACGTAGCACCCACAGGCACTGGCCGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674278.1
CDS-3UTR CCA 90 bp AGCGAGGTGTGGCAGAAGCAGGCTCGGAGCCGGAGGAGGGTGGCTATCGGCTTTTTTTTCTCGATTTGCTaGGGAGGCAGGCGCCTCATT +
Preference number: 4 (lower is better)
Translates to: SEVWQKQARSRRRVAIGFFFSIC*GGRRLI
Trigger: AATGAGGCGCCTGCCTCCCCAGCAAATCGAGAAAAA...AAAGCCGATAGCCACCCTCCTCCGGCTCCGAGCCTGCTTCTGCCACACCTCGCT
59% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264202.8
ENST00000264203.7
ENST00000375142.5
ENST00000375144.6
ENST00000674449.1
CDS-3UTR CCA 90 bp TCCTGTTTTAGTGGGGAGGGTCTCGCGGCTCTCAGGCAGGGTACCTGGATCGGCGATCCTCACATAGACTaGGGACCAGGTCGATCAGGT +
Preference number: 4 (lower is better)
Translates to: SCFSGEGLAALRQGTWIGDPHID*GPGRSG
Trigger: ACCTGATCGACCTGGTCCCCAGTCTATGTGAGGATC...GCCGATCCAGGTACCCTGCCTGAGAGCCGCGAGACCCTCCCCACTAAAACAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674432.1
CDS-3UTR CCA 90 bp AGCGAGGTGTGGCAGAAGCAGGCTCGGAGCCGGAGGAGGGTGGCTATCGGCTTTCCACCACCTTGTCTCTaGCAATTTTCAGTGGCTGGT +
Preference number: 4 (lower is better)
Translates to: SEVWQKQARSRRRVAIGFPPPCL*QFSVAG
Trigger: ACCAGCCACTGAAAATTGCCAGAGACAAGGTGGTGG...AAAGCCGATAGCCACCCTCCTCCGGCTCCGAGCCTGCTTCTGCCACACCTCGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264202.8
ENST00000264203.7
ENST00000375142.5
ENST00000375144.6
ENST00000674449.1
CDS-3UTR CCA 90 bp GCTGTGCGGTCAATGATGCAGCTGTTATGTGACCTGTCGGGGAGGGAAGGGACGGGGCGGTGCGACCGCTaGATTTCTCCTGCACTTCTA +
Preference number: 4 (lower is better)
Translates to: AVRSMMQLLCDLSGREGTGRCDR*ISPALL
Trigger: TAGAAGTGCAGGAGAAATCCAGCGGTCGCACCGCCC...CGTCCCTTCCCTCCCCGACAGGTCACATAACAGCTGCATCATTGACCGCACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000264202.8
ENST00000264203.7
ENST00000375142.5
ENST00000375144.6
ENST00000433834.5
ENST00000674228.1
ENST00000674432.1
ENST00000674449.1
CDS-3UTR CCA 90 bp GGGAGAGATGGCGCTGTGCGGTCAATGATGCAGCTGTTATGTGACCTGTCGGGGGGGCGGTGCGACCGCTaGATTTCTCCTGCACTTCTA +
Preference number: 4 (lower is better)
Translates to: GRDGAVRSMMQLLCDLSGGRCDR*ISPALL
Trigger: TAGAAGTGCAGGAGAAATCCAGCGGTCGCACCGCCC...CCCCGACAGGTCACATAACAGCTGCATCATTGACCGCACAGCGCCATCTCTCCC
59% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 8 transcripts:
ENST00000264202.8
ENST00000264203.7
ENST00000375142.5
ENST00000375144.6
ENST00000433834.5
ENST00000674228.1
ENST00000674432.1
ENST00000674449.1
CDS-3UTR CCA 90 bp GGGAGGAGTCATCTTGAGCAGACCTGGCTGCCAGGGTTTCTACGCCAGGACGCCGCCACAGCATCACCGTaGAGGTCAACTTGTAATGGG +
Preference number: 4 (lower is better)
Translates to: GRSHLEQTWLPGFLRQDAATASP*RSTCNG
Trigger: CCCATTACAAGTTGACCTCCACGGTGATGCTGTGGC...GGCGTCCTGGCGTAGAAACCCTGGCAGCCAGGTCTGCTCAAGATGACTCCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR CCA 90 bp CGAGGTGTGGCAGAAGCAGGCTCGGAGCCGGAGGAGGGTGGCTATCGGCTTTATTGCCTCCGAGGTTCATaGTGCCAGAGCCAGATTTGT +
Preference number: 4 (lower is better)
Translates to: RGVAEAGSEPEEGGYRLYCLRGS*CQSQIC
Trigger: ACAAATCTGGCTCTGGCACCATGAACCTCGGAGGCA...ATAAAGCCGATAGCCACCCTCCTCCGGCTCCGAGCCTGCTTCTGCCACACCTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264202.8
ENST00000264203.7
ENST00000375142.5
ENST00000375144.6
ENST00000674449.1
CDS-3UTR CCA 90 bp TCATGTCAGAGGCCTGCCTCCTGCTCTGTCCGCCGTGGACCTGGAGGGTCCAGAGATGTTGGCTATGTGTaGGGAGCAGTCACTCACAGT +
Preference number: 4 (lower is better)
Translates to: SCQRPASCSVRRGPGGSRDVGYV*GAVTHS
Trigger: ACTGTGAGTGACTGCTCCCCACACATAGCCAACATC...TCTGGACCCTCCAGGTCCACGGCGGACAGAGCAGGAGGCAGGCCTCTGACATGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR CCA 90 bp GTGTGGCAGAAGCAGGCTCGGAGCCGGAGGAGGGTGGCTATCGGCTTTATTCTCGGAGCCGGAGGAGGGTaGCTATCGGCTTTATTCTCA +
Preference number: 4 (lower is better)
Translates to: VWQKQARSRRRVAIGFILGAGGG*LSALFS
Trigger: TGAGAATAAAGCCGATAGCCACCCTCCTCCGGCTCC...GAGAATAAAGCCGATAGCCACCCTCCTCCGGCTCCGAGCCTGCTTCTGCCACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264202.8
ENST00000264203.7
ENST00000375142.5
ENST00000375144.6
ENST00000674432.1
ENST00000674449.1
CDS-3UTR CCA 90 bp CGAGGTGTGGCAGAAGCAGGCTCGGAGCCGGAGGAGGGTGGCTATCGGCTTTATGGGGGCAAGAGGAAGTaGAAACATGACGTGACTAGG +
Preference number: 4 (lower is better)
Translates to: RGVAEAGSEPEEGGYRLYGGKRK*KHDVTR
Trigger: CCTAGTCACGTCATGTTTCCACTTCCTCTTGCCCCC...ATAAAGCCGATAGCCACCCTCCTCCGGCTCCGAGCCTGCTTCTGCCACACCTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264203.7
CDS-3UTR CCA 90 bp CTCAATGCCATGATGGAAATGCCTGATGGCCACACTGTGAGGCTGACCCGAGTCGATGGTGCAGGACACTaGCCACTGGCAGCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: LNAMMEMPDGHTVRLTRVDGAGH*PLAAEP
Trigger: GGGCTCTGCTGCCAGTGGCCAGTGTCCTGCACCATC...GACTCGGGTCAGCCTCACAGTGTGGCCATCAGGCATTTCCATCATGGCATTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR CCA 90 bp ACACCGAGGCCCAAGACCACACAGCTAGTAACTGGCAGAGCCAGGGTTCAAATCCTGCTCTGTCCGCCGTaGACCTGGAGGGTCCAGAGA +
Preference number: 4 (lower is better)
Translates to: TPRPKTTQLVTGRARVQILLCPP*TWRVQR
Trigger: TCTCTGGACCCTCCAGGTCCACGGCGGACAGAGCAG...GATTTGAACCCTGGCTCTGCCAGTTACTAGCTGTGTGGTCTTGGGCCTCGGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR CCA 90 bp GCCAAGCAACCTCGAATCAGCGCTTGGAGACAGTGCTCGACTCTGTGGGAGGGATGCAGAGGTCCACGCTaGCGGTGGTCGTGGTATTCA +
Preference number: 4 (lower is better)
Translates to: AKQPRISAWRQCSTLWEGCRGPR*RWSWYS
Trigger: TGAATACCACGACCACCGCCAGCGTGGACCTCTGCA...TCCCTCCCACAGAGTCGAGCACTGTCTCCAAGCGCTGATTCGAGGTTGCTTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR CCA 90 bp GCCCGCCAGGTCTTGGCTGGATCACACGAAGGAGAAAGTTCCAGAGCTAGAATCATGCCGTGGCGGCTCTaGGGTGTGGAGTGGTATCGC +
Preference number: 4 (lower is better)
Translates to: ARQVLAGSHEGESSRARIMPWRL*GVEWYR
Trigger: GCGATACCACTCCACACCCCAGAGCCGCCACGGCAT...GATTCTAGCTCTGGAACTTTCTCCTTCGTGTGATCCAGCCAAGACCTGGCGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR CCA 90 bp GGGCTCTGCAGCCCCAGTTGGCAGGGTTCCAAATGCCTTCTTTTTACAAACAAGGGCAGATCCCTGCCCTaGGGACAGTCAGGCCGGTGC +
Preference number: 4 (lower is better)
Translates to: GLCSPSWQGSKCLLFTNKGRSLP*GQSGRC
Trigger: GCACCGGCCTGACTGTCCCCAGGGCAGGGATCTGCC...CTTGTTTGTAAAAAGAAGGCATTTGGAACCCTGCCAACTGGGGCTGCAGAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR CCA 90 bp TCCCTGCTGTCAAATTCTGGATTTGTGGGGAAACGTTCAGGGCGACCGCATTCATGGCCGAGTCGGCACTaGGCGTCCAGGCAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: SLLSNSGFVGKRSGRPHSWPSRH*ASRQLQ
Trigger: CTGGAGCTGCCTGGACGCCCAGTGCCGACTCGGCCA...TGAATGCGGTCGCCCTGAACGTTTCCCCACAAATCCAGAATTTGACAGCAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR CCA 90 bp AGAGCGAGGTGTGGCAGAAGCAGGCTCGGAGCCGGAGGAGGGTGGCTATCGGCTCTCCTTCCCTACATCTaGATCTGTCACAAGCTCAAG +
Preference number: 4 (lower is better)
Translates to: RARCGRSRLGAGGGWLSALLPYI*ICHKLK
Trigger: CTTGAGCTTGTGACAGATCCAGATGTAGGGAAGGAG...AGCCGATAGCCACCCTCCTCCGGCTCCGAGCCTGCTTCTGCCACACCTCGCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375144.6
CDS-3UTR CCA 90 bp CCCTGTGGGGGTGGCATATGGCTTACATGGACAGGTGCTCATCTCTGCCCCTGGCTCTGCAGCCCCAGTTaGCAGGGTTCCAAATGCCTT +
Preference number: 4 (lower is better)
Translates to: PCGGGIWLTWTGAHLCPWLCSPS*QGSKCL
Trigger: AAGGCATTTGGAACCCTGCCAACTGGGGCTGCAGAG...CCAGGGGCAGAGATGAGCACCTGTCCATGTAAGCCATATGCCACCCCCACAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR CCA 90 bp GGGCTCTGCAGCCCCAGTTGGCAGGGTTCCAAATGCCTTCTTTTTACAAACAAGTCAGTGCGCAGCCCCTaGACCTGGGCTCTGCAGCCC +
Preference number: 4 (lower is better)
Translates to: GLCSPSWQGSKCLLFTNKSVRSP*TWALQP
Trigger: GGGCTGCAGAGCCCAGGTCCAGGGGCTGCGCACTGA...CTTGTTTGTAAAAAGAAGGCATTTGGAACCCTGCCAACTGGGGCTGCAGAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR CCA 90 bp ACAGGTCACGAAGACCAAGCCTCCCCCAGGTGGGCAGGGGATCAGAAGACAAGGCAGTGCTCGACTCTGTaGGAGGGAGGAGTCATCTTG +
Preference number: 4 (lower is better)
Translates to: TGHEDQASPRWAGDQKTRQCSTL*EGGVIL
Trigger: CAAGATGACTCCTCCCTCCCACAGAGTCGAGCACTG...CCTTGTCTTCTGATCCCCTGCCCACCTGGGGGAGGCTTGGTCTTCGTGACCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR CCA 90 bp CGGCGGGTTGGTGAGTCCTGTTTTAGTGGGGAGGGTCTCGCGGCTCTCAGGCAGTTAAGGGACAATGCTTaGGAAGGTCACGGCCAAGCA +
Preference number: 4 (lower is better)
Translates to: RRVGESCFSGEGLAALRQLRDNA*EGHGQA
Trigger: TGCTTGGCCGTGACCTTCCCAAGCATTGTCCCTTAA...CTGCCTGAGAGCCGCGAGACCCTCCCCACTAAAACAGGACTCACCAACCCGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR CCA 90 bp CAGCTCGGGATGACAGAGCTTAGGGGAGATCCCGGCCTCCTGACTCTCCTGACTCCGCCAGGTCTTGGCTaGATCACACGAAGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: QLGMTELRGDPGLLTLLTPPGLG*ITRRRK
Trigger: CTTTCTCCTTCGTGTGATCCAGCCAAGACCTGGCGG...AGTCAGGAGAGTCAGGAGGCCGGGATCTCCCCTAAGCTCTGTCATCCCGAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375144.6
ENST00000674228.1
CDS-3UTR CCA 90 bp CCCTGTGGGGGTGGCATATGGCTTACATGGACAGGTGCTCATCTCTGCCCCTGGACAGGACCTCTAGCCTaGGTGGTCACTGGCTCTTCT +
Preference number: 4 (lower is better)
Translates to: PCGGGIWLTWTGAHLCPWTGPLA*VVTGSS
Trigger: AGAAGAGCCAGTGACCACCCAGGCTAGAGGTCCTGT...CCAGGGGCAGAGATGAGCACCTGTCCATGTAAGCCATATGCCACCCCCACAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1
ENST00000674432.1
CDS-3UTR CCA 90 bp AGGCCCTGTGGGGGTGGCATATGGCTTACATGGACAGGTGCTCATCTCTGCCCCACAGGACCTCTAGCCTaGGTGGTCACTGGCTCTTCT +
Preference number: 4 (lower is better)
Translates to: RPCGGGIWLTWTGAHLCPTGPLA*VVTGSS
Trigger: AGAAGAGCCAGTGACCACCCAGGCTAGAGGTCCTGT...GGGGCAGAGATGAGCACCTGTCCATGTAAGCCATATGCCACCCCCACAGGGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375144.6
ENST00000674228.1