RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CACNA2D4 (Homo sapiens)

Ensembl gene IDs: ENSG00000151062

Ensembl transcript IDs: ENST00000280663.12, ENST00000382722.10, ENST00000444595.6, ENST00000536818.2, ENST00000536846.6, ENST00000537784.5, ENST00000537923.5, ENST00000538027.6, ENST00000538450.5, ENST00000539048.2, ENST00000540728.6, ENST00000541331.5, ENST00000541444.5, ENST00000541616.1, ENST00000542340.1, ENST00000543405.1, ENST00000545595.6, ENST00000585385.5, ENST00000585708.5, ENST00000585732.1, ENST00000586184.5, ENST00000587995.5, ENST00000588077.5, ENST00000588896.1, ENST00000589502.5, ENST00000590880.1, ENST00000642253.1, ENST00000642731.1, ENST00000642910.1, ENST00000642921.1, ENST00000643563.1, ENST00000643629.1, ENST00000644272.1, ENST00000644394.1, ENST00000644401.1, ENST00000644558.1, ENST00000644981.1, ENST00000645018.2, ENST00000645049.1, ENST00000645209.1, ENST00000645225.1, ENST00000645267.1, ENST00000645737.1, ENST00000645926.1, ENST00000646018.1, ENST00000646095.1, ENST00000646498.1, ENST00000646946.1, ENST00000647066.1, ENST00000647100.1, ENST00000647253.1, ENST00000647339.1

Found 2755 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CAGGGCCCGCACTCCACGATCCCGTTGGCCTCCCGGATGGCCGGCTaGTACACGAACACGGGGTACTCCGTGTCGCAGGGCTGCAGCGGG +
Preference number: 1 (lower is better)
Translates to: QGPHSTIPLASRMAG*YTNTGYSVSQGCSG
Trigger: CCCGCTGCAGCCCTGCGACACGGAGTACCCCGTGTTCGTGTACCAGCCGGCCATCCGGGAGGCCAACGGGATCGTGGAGTGCGGGCCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000537923.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
ENST00000647066.1
3UTR CCA 90 bp CCTTCTGGCAGGGCCCGCACTCCACGATCCCGTTGGCCTCCCGGATaGCCGGCTGGTACACGAACACGGGGTACTCCGTGTCGCAGGGCT +
Preference number: 1 (lower is better)
Translates to: PSGRARTPRSRWPPG*PAGTRTRGTPCRRA
Trigger: AGCCCTGCGACACGGAGTACCCCGTGTTCGTGTACCAGCCGGCCATCCGGGAGGCCAACGGGATCGTGGAGTGCGGGCCCTGCCAGAAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000537923.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
ENST00000647066.1
3UTR CCA 90 bp CAGCGGAGGTTGAAGACGAAGCTGCCAGCAGGATGCTCTGAGGCCTaGCGGTACCACAGCGGGAAGCGGTCCAGGGTGAACACGCTGGCC +
Preference number: 1 (lower is better)
Translates to: QRRLKTKLPAGCSEA*RYHSGKRSRVNTLA
Trigger: GGCCAGCGTGTTCACCCTGGACCGCTTCCCGCTGTGGTACCGCCAGGCCTCAGAGCATCCTGCTGGCAGCTTCGTCTTCAACCTCCGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
3UTR CCA 90 bp GCACCACAAATACCTTCTGGCAGGGCCCGCACTCCACGATCCCGTTaGCCTCCCGGATGGCCGGCTGGTACACGAACACGGGGTACTCCG +
Preference number: 1 (lower is better)
Translates to: APQIPSGRARTPRSR*PPGWPAGTRTRGTP
Trigger: CGGAGTACCCCGTGTTCGTGTACCAGCCGGCCATCCGGGAGGCCAACGGGATCGTGGAGTGCGGGCCCTGCCAGAAGGTATTTGTGGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000537923.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
ENST00000647066.1
3UTR TCA 90 bp GATGCTCTGAGGCCTGGCGGTACCACAGCGGGAAGCGGTCCAGGGTaGACACGCTGGCCTCGTCCTCAGGTGTCAGGAACTTCCTGTCGG +
Preference number: 1 (lower is better)
Translates to: DALRPGGTTAGSGPG*TRWPRPQVSGTSCR
Trigger: CCGACAGGAAGTTCCTGACACCTGAGGACGAGGCCAGCGTGTTCACCCTGGACCGCTTCCCGCTGTGGTACCGCCAGGCCTCAGAGCATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
3UTR TCA 90 bp TTCTGCCCAGCGGAGGTTGAAGACGAAGCTGCCAGCAGGATGCTCTaGGGCCTGGCGGTACCACAGCGGGAAGCGGTCCAGGGTGAACAC +
Preference number: 1 (lower is better)
Translates to: FCPAEVEDEAASRML*GLAVPQREAVQGEH
Trigger: GTGTTCACCCTGGACCGCTTCCCGCTGTGGTACCGCCAGGCCTCAGAGCATCCTGCTGGCAGCTTCGTCTTCAACCTCCGCTGGGCAGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
3UTR GCA 90 bp TCTCGGAGCCCACGAACAAGCTGCTTCTCAGGAGGCCAGCCCGGGTaGCCAGGAAGGCCATGTCCACCACGTGTTCAGACTCCTCGGACA +
Preference number: 1 (lower is better)
Translates to: SRSPRTSCFSGGQPG*PGRPCPPRVQTPRT
Trigger: TGTCCGAGGAGTCTGAACACGTGGTGGACATGGCCTTCCTGGGCACCCGGGCTGGCCTCCTGAGAAGCAGCTTGTTCGTGGGCTCCGAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
3UTR CCA 90 bp GCAGTCCTGGGCATTCTCCTCTGGATGGAAGGCGTGGCAGGAGTCTaGTCGCCGGCGGAGCTTCTGGGAGCGCATCCGGTCACATTTGAC +
Preference number: 1 (lower is better)
Translates to: AVLGILLWMEGVAGV*SPAELLGAHPVTFD
Trigger: GTCAAATGTGACCGGATGCGCTCCCAGAAGCTCCGCCGGCGACCAGACTCCTGCCACGCCTTCCATCCAGAGGAGAATGCCCAGGACTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR GCA 90 bp TCAGGAACTTCCTGTCGGAGACCTTCTCGGAGCCCACGAACAAGCTaGTTCTCAGGAGGCCAGCCCGGGTGCCCAGGAAGGCCATGTCCA +
Preference number: 1 (lower is better)
Translates to: SGTSCRRPSRSPRTS*FSGGQPGCPGRPCP
Trigger: TGGACATGGCCTTCCTGGGCACCCGGGCTGGCCTCCTGAGAAGCAGCTTGTTCGTGGGCTCCGAGAAGGTCTCCGACAGGAAGTTCCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
3UTR CCA 90 bp TGTTGCTCTCACTGTGGAGACTGTTGTCTCCTGGGATCCAGGTCTTaGGGTTTGGTCGGGGGAGGAAGCTGCGGGGCCTTGGGACCCTGG +
Preference number: 1 (lower is better)
Translates to: CCSHCGDCCLLGSRS*GLVGGGSCGALGPW
Trigger: CCAGGGTCCCAAGGCCCCGCAGCTTCCTCCCCCGACCAAACCCCAAGACCTGGATCCCAGGAGACAACAGTCTCCACAGTGAGAGCAACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382722.10
ENST00000537784.5
ENST00000645018.2
ENST00000646946.1
3UTR CCA 90 bp GGCTTTGCCCTTAATGTTGCTCTCACTGTGGAGACTGTTGTCTCCTaGGATCCAGGTCTTGGGGTTTGGTCGGGGGAGGAAGCTGCGGGG +
Preference number: 1 (lower is better)
Translates to: GFALNVALTVETVVS*DPGLGVWSGEEAAG
Trigger: CCCCGCAGCTTCCTCCCCCGACCAAACCCCAAGACCTGGATCCCAGGAGACAACAGTCTCCACAGTGAGAGCAACATTAAGGGCAAAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382722.10
ENST00000537784.5
ENST00000645018.2
ENST00000646946.1
3UTR CCA 90 bp GTGTGTGCGCTGGGGGTGAGTTCCCAGATAGAGCTTCCCTCCCAGTaGACCCTGCTTAGCAAGTTGGAATGTTCCCACAAGTTCCAACCC +
Preference number: 1 (lower is better)
Translates to: VCALGVSSQIELPSQ*TLLSKLECSHKFQP
Trigger: GGGTTGGAACTTGTGGGAACATTCCAACTTGCTAAGCAGGGTCCACTGGGAGGGAAGCTCTATCTGGGAACTCACCCCCAGCGCACACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000382722.10
ENST00000537784.5
ENST00000645018.2
ENST00000646946.1
3UTR CCA 90 bp TCTGGATGGAAGGCGTGGCAGGAGTCTGGTCGCCGGCGGAGCTTCTaGGAGCGCATCCGGTCACATTTGACAGAGGCATTATATTTGACT +
Preference number: 1 (lower is better)
Translates to: SGWKAWQESGRRRSF*ERIRSHLTEALYLT
Trigger: AGTCAAATATAATGCCTCTGTCAAATGTGACCGGATGCGCTCCCAGAAGCTCCGCCGGCGACCAGACTCCTGCCACGCCTTCCATCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR CCA 90 bp AATATCTGTGATGCAGTAGATCCAGTCACCGGCCAGGGCCAGGTCTaGGTGAAGCAAGTCATGCAGGCCTTCTTCCACAGACGTGTTCCC +
Preference number: 1 (lower is better)
Translates to: NICDAVDPVTGQGQV*VKQVMQAFFHRRVP
Trigger: GGGAACACGTCTGTGGAAGAAGGCCTGCATGACTTGCTTCACCCAGACCTGGCCCTGGCCGGTGACTGGATCTACTGCATCACAGATATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
3UTR CCA 90 bp GACAGAGGCATTATATTTGACTTCTGTCGCCTCCTGCAGCACTGGTaGGAAGATGCTGCAGTCACAGGTGGGGTCTGTCACCAGGAGGAG +
Preference number: 1 (lower is better)
Translates to: DRGIIFDFCRLLQHW*EDAAVTGGVCHQEE
Trigger: CTCCTCCTGGTGACAGACCCCACCTGTGACTGCAGCATCTTCCCACCAGTGCTGCAGGAGGCGACAGAAGTCAAATATAATGCCTCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR CCA 90 bp CTCCCACATTTCTCCATGGCTTTGCCCTTAATGTTGCTCTCACTGTaGAGACTGTTGTCTCCTGGGATCCAGGTCTTGGGGTTTGGTCGG +
Preference number: 1 (lower is better)
Translates to: LPHFSMALPLMLLSL*RLLSPGIQVLGFGR
Trigger: CCGACCAAACCCCAAGACCTGGATCCCAGGAGACAACAGTCTCCACAGTGAGAGCAACATTAAGGGCAAAGCCATGGAGAAATGTGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382722.10
ENST00000537784.5
ENST00000645018.2
ENST00000646946.1
3UTR CCA 90 bp CAGTTAGCTGCATCCCATGTCAGTGCTGACTTTTTGGGATGGCTCTaGAAGGATCACCTTGCCAAAACACAGGTCAGGCTGGGTGGTGTC +
Preference number: 1 (lower is better)
Translates to: QLAASHVSADFLGWL*KDHLAKTQVRLGGV
Trigger: GACACCACCCAGCCTGACCTGTGTTTTGGCAAGGTGATCCTTCCAGAGCCATCCCAAAAAGTCAGCACTGACATGGGATGCAGCTAACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR TCA 90 bp TGGGTTCTACCAGAGACCACTCCGACAGAAAGGGTCAGAAACAACTaGCCCTTTCTTGGCTGGGTCTGGACTCTGGAGTACAGGAAGAAC +
Preference number: 1 (lower is better)
Translates to: WVLPETTPTERVRNN*PFLGWVWTLEYRKN
Trigger: GTTCTTCCTGTACTCCAGAGTCCAGACCCAGCCAAGAAAGGGTCAGTTGTTTCTGACCCTTTCTGTCGGAGTGGTCTCTGGTAGAACCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000587995.5
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR TCA 90 bp ATGTTGAGACCTAGGGCAGATGGTACCGGGCACCATGAAGCATCTTaGAAGTGGTGCCAGGTGATTGGTTTCCTGTTCCATCCAGCATTC +
Preference number: 1 (lower is better)
Translates to: MLRPRADGTGHHEAS*KWCQVIGFLFHPAF
Trigger: GAATGCTGGATGGAACAGGAAACCAATCACCTGGCACCACTTTCAAGATGCTTCATGGTGCCCGGTACCATCTGCCCTAGGTCTCAACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000587995.5
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR TCA 90 bp TCCCGAAGAGGAGACAGGAAGGTTAGGTCAGAAGTATGCTCATGTTaGGACCTAGGGCAGATGGTACCGGGCACCATGAAGCATCTTGAA +
Preference number: 1 (lower is better)
Translates to: SRRGDRKVRSEVCSC*DLGQMVPGTMKHLE
Trigger: TTCAAGATGCTTCATGGTGCCCGGTACCATCTGCCCTAGGTCTCAACATGAGCATACTTCTGACCTAACCTTCCTGTCTCCTCTTCGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000587995.5
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR CCA 90 bp CATTTGGCCTCATTCTGCTGCTGCTTCTCAGTACCCAGAAGTCCTTaGGTTCTACCAGAGACCACTCCGACAGAAAGGGTCAGAAACAAC +
Preference number: 1 (lower is better)
Translates to: HLASFCCCFSVPRSP*VLPETTPTERVRNN
Trigger: GTTGTTTCTGACCCTTTCTGTCGGAGTGGTCTCTGGTAGAACCCAAGGACTTCTGGGTACTGAGAAGCAGCAGCAGAATGAGGCCAAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000587995.5
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR GCA 90 bp ATTCTTGCCTTAGCCTCATCTCTGCATTTGGCCTCATTCTGCTGCTaGTTCTCAGTACCCAGAAGTCCTTGGGTTCTACCAGAGACCACT +
Preference number: 1 (lower is better)
Translates to: ILALASSLHLASFCC*FSVPRSPWVLPETT
Trigger: AGTGGTCTCTGGTAGAACCCAAGGACTTCTGGGTACTGAGAAGCAGCAGCAGAATGAGGCCAAATGCAGAGATGAGGCTAAGGCAAGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000587995.5
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR TCA 90 bp CATGCTGTCCATACCCATCACTGGGGTTTGTTAAATGGAAAGATTTaGGGCCGGCCTCTCCCACATTTCTCCATGGCTTTGCCCTTAATG +
Preference number: 1 (lower is better)
Translates to: HAVHTHHWGLLNGKI*GRPLPHFSMALPLM
Trigger: CATTAAGGGCAAAGCCATGGAGAAATGTGGGAGAGGCCGGCCTCAAATCTTTCCATTTAACAAACCCCAGTGATGGGTATGGACAGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382722.10
ENST00000537784.5
ENST00000645018.2
ENST00000646946.1
3UTR GCA 90 bp CTTAGCTGTTCTAGCATTATTCTGCCACTTAAGCTGTCTTCGAGCTaGAGTGTCTTCTGCTGTAAGGGGGCATTAATACTGCCCTCACAG +
Preference number: 1 (lower is better)
Translates to: LSCSSIILPLKLSSS*SVFCCKGALILPSQ
Trigger: CTGTGAGGGCAGTATTAATGCCCCCTTACAGCAGAAGACACTGCAGCTCGAAGACAGCTTAAGTGGCAGAATAATGCTAGAACAGCTAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000382722.10
ENST00000537784.5
ENST00000645018.2
ENST00000646946.1
3UTR CCA 90 bp AGAGACCACTCCGACAGAAAGGGTCAGAAACAACTGACCCTTTCTTaGCTGGGTCTGGACTCTGGAGTACAGGAAGAACTAAATTATTTT +
Preference number: 1 (lower is better)
Translates to: RDHSDRKGQKQLTLS*LGLDSGVQEELNYF
Trigger: AAAATAATTTAGTTCTTCCTGTACTCCAGAGTCCAGACCCAGCCAAGAAAGGGTCAGTTGTTTCTGACCCTTTCTGTCGGAGTGGTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000587995.5
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR TCA 90 bp ACTAATGATAGTACCCACTTTCAGGGGGCTGTTGTGAGGATGGAATaGGCTGAAACATGTTATTTGGTACATGTAAACCTTAGCTGTTCT +
Preference number: 1 (lower is better)
Translates to: TNDSTHFQGAVVRME*AETCYLVHVNLSCS
Trigger: AGAACAGCTAAGGTTTACATGTACCAAATAACATGTTTCAGCTCATTCCATCCTCACAACAGCCCCCTGAAAGTGGGTACTATCATTAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000382722.10
ENST00000537784.5
ENST00000645018.2
ENST00000646946.1
3UTR-3UTR CCA 90 bp GCAGGAGTAGGGGCGGCGAGGCTGAGGTGTCCGAGGCGCCGCCGCAGTCCTGGGGGCGTGGCAGGAGTCTaGTCGCCGGCGGAGCTTCTG +
Preference number: 2 (lower is better)
Translates to: AGVGAARLRCPRRRRSPGGVAGV*SPAELL
Trigger: CAGAAGCTCCGCCGGCGACCAGACTCCTGCCACGCC...CCCAGGACTGCGGCGGCGCCTCGGACACCTCAGCCTCGCCGCCCCTACTCCTGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR GCA 90 bp GCAGGAGTAGGGGCGGCGAGGCTGAGGTGTCCGAGGCGCCGCCGCAGTCCTGGGAGCCCACGAACAAGCTaGTTCTCAGGAGGCCAGCCC +
Preference number: 2 (lower is better)
Translates to: AGVGAARLRCPRRRRSPGSPRTS*FSGGQP
Trigger: GGGCTGGCCTCCTGAGAAGCAGCTTGTTCGTGGGCT...CCCAGGACTGCGGCGGCGCCTCGGACACCTCAGCCTCGCCGCCCCTACTCCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
3UTR-3UTR CCA 90 bp TTCTGGCAGGGCCCGCACTCCACGATCCCGTTGGCCTCCCGGATGGCCGGCTGGAGAGGAGCGTTGGCCTaGGGGCGACCCAACTGCAGT +
Preference number: 2 (lower is better)
Translates to: FWQGPHSTIPLASRMAGWRGALA*GRPNCS
Trigger: ACTGCAGTTGGGTCGCCCCCAGGCCAACGCTCCTCT...CCAGCCGGCCATCCGGGAGGCCAACGGGATCGTGGAGTGCGGGCCCTGCCAGAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CCA 90 bp GGCCTCCCGGATGGCCGGCTGGTACACGAACACGGGGTACTCCGTGTCGCAGGGAGAGGAGCGTTGGCCTaGGGGCGACCCAACTGCAGT +
Preference number: 2 (lower is better)
Translates to: GLPDGRLVHEHGVLRVAGRGALA*GRPNCS
Trigger: ACTGCAGTTGGGTCGCCCCCAGGCCAACGCTCCTCT...CCCTGCGACACGGAGTACCCCGTGTTCGTGTACCAGCCGGCCATCCGGGAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CCA 90 bp AGCAGGAGTAGGGGCGGCGAGGCTGAGGTGTCCGAGGCGCCGCCGCAGTCCTGGAAGCTGAGCTCACGCTaGCTTCCCGAAGAGGAGACA +
Preference number: 2 (lower is better)
Translates to: SRSRGGEAEVSEAPPQSWKLSSR*LPEEET
Trigger: TGTCTCCTCTTCGGGAAGCCAGCGTGAGCTCAGCTT...CCAGGACTGCGGCGGCGCCTCGGACACCTCAGCCTCGCCGCCCCTACTCCTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR GCA 90 bp GGAATCTGCTGCACCACAAATACCTTCTGGCAGGGCCCGCACTCCACGATCCCGGTCGGGGGAGGAAGCTaGGGGGCCTTGGGACCCTGG +
Preference number: 2 (lower is better)
Translates to: GICCTTNTFWQGPHSTIPVGGGS*GALGPW
Trigger: CCAGGGTCCCAAGGCCCCGCAGCTTCCTCCCCCGAC...CGGGATCGTGGAGTGCGGGCCCTGCCAGAAGGTATTTGTGGTGCAGCAGATTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000537784.5
ENST00000646946.1
3UTR-3UTR CCA 90 bp GCAGGAGTAGGGGCGGCGAGGCTGAGGTGTCCGAGGCGCCGCCGCAGTCCTGGGCCTCATCTCTGCATTTaGCCTCATTCTGCTGCTGCT +
Preference number: 2 (lower is better)
Translates to: AGVGAARLRCPRRRRSPGPHLCI*PHSAAA
Trigger: AGCAGCAGCAGAATGAGGCCAAATGCAGAGATGAGG...CCCAGGACTGCGGCGGCGCCTCGGACACCTCAGCCTCGCCGCCCCTACTCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR CAA 90 bp TGCACCACAAATACCTTCTGGCAGGGCCCGCACTCCACGATCCCGTaGGCCTCCCGGATGGCCGGCTGGTACACGAACACGGGGTACTCC +
Preference number: 2 (lower is better)
Translates to: CTTNTFWQGPHSTIP*ASRMAGWYTNTGYS
Trigger: GGAGTACCCCGTGTTCGTGTACCAGCCGGCCATCCGGGAGGCCAACGGGATCGTGGAGTGCGGGCCCTGCCAGAAGGTATTTGTGGTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000537923.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
ENST00000647066.1
3UTR-3UTR TCA 90 bp AGCAGGAGTAGGGGCGGCGAGGCTGAGGTGTCCGAGGCGCCGCCGCAGTCCTGGGAAGTATGCTCATGTTaGGACCTAGGGCAGATGGTA +
Preference number: 2 (lower is better)
Translates to: SRSRGGEAEVSEAPPQSWEVCSC*DLGQMV
Trigger: TACCATCTGCCCTAGGTCTCAACATGAGCATACTTC...CCAGGACTGCGGCGGCGCCTCGGACACCTCAGCCTCGCCGCCCCTACTCCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CCA 90 bp TGCTGCACCACAAATACCTTCTGGCAGGGCCCGCACTCCACGATCCCGTTGGCCAGAGGAGCGTTGGCCTaGGGGCGACCCAACTGCAGT +
Preference number: 2 (lower is better)
Translates to: CCTTNTFWQGPHSTIPLARGALA*GRPNCS
Trigger: ACTGCAGTTGGGTCGCCCCCAGGCCAACGCTCCTCT...GGCCAACGGGATCGTGGAGTGCGGGCCCTGCCAGAAGGTATTTGTGGTGCAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR TCA 90 bp GAACACGGGGTACTCCGTGTCGCAGGGCTGCAGCGGGTCCTGCTTCTTGTGTTTCTGCCCAGCGGAGGTTaGAGACGAAGCTGCCAGCAG +
Preference number: 2 (lower is better)
Translates to: EHGVLRVAGLQRVLLLVFLPSGG*RRSCQQ
Trigger: CTGCTGGCAGCTTCGTCTTCAACCTCCGCTGGGCAG...AAACACAAGAAGCAGGACCCGCTGCAGCCCTGCGACACGGAGTACCCCGTGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
3UTR-3UTR CCA 90 bp CGGCTGGTACACGAACACGGGGTACTCCGTGTCGCAGGGCTGCAGCGGGTCCTGCTCAGAGATTCAGCCTaGTCTTCCCACTCCACTTCG +
Preference number: 2 (lower is better)
Translates to: RLVHEHGVLRVAGLQRVLLRDSA*SSHSTS
Trigger: CGAAGTGGAGTGGGAAGACCAGGCTGAATCTCTGAG...CAGGACCCGCTGCAGCCCTGCGACACGGAGTACCCCGTGTTCGTGTACCAGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
3UTR-3UTR TCA 90 bp CGGCTGGTACACGAACACGGGGTACTCCGTGTCGCAGGGCTGCAGCGGGTCCTGGAAAGTGGTGCCAGGTaGTTGGTTTCCTGTTCCATC +
Preference number: 2 (lower is better)
Translates to: RLVHEHGVLRVAGLQRVLESGAR*LVSCSI
Trigger: GATGGAACAGGAAACCAATCACCTGGCACCACTTTC...CAGGACCCGCTGCAGCCCTGCGACACGGAGTACCCCGTGTTCGTGTACCAGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR TCA 90 bp AGGCTGAGGTGTCCGAGGCGCCGCCGCAGTCCTGGGCATTCTCCTCTGGATGGATGGTACCGGGCACCATaGAGCATCTTGAAAGTGGTG +
Preference number: 2 (lower is better)
Translates to: RLRCPRRRRSPGHSPLDGWYRAP*SILKVV
Trigger: CACCACTTTCAAGATGCTTCATGGTGCCCGGTACCA...TCCATCCAGAGGAGAATGCCCAGGACTGCGGCGGCGCCTCGGACACCTCAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR TCA 90 bp GGGCATTCTCCTCTGGATGGAAGGCGTGGCAGGAGTCTGGTCGCCGGCGGAGCTAGGGTCAGAAACAACTaGCCCTTTCTTGGCTGGGTC +
Preference number: 2 (lower is better)
Translates to: GHSPLDGRRGRSLVAGGARVRNN*PFLGWV
Trigger: GACCCAGCCAAGAAAGGGTCAGTTGTTTCTGACCCT...AGCTCCGCCGGCGACCAGACTCCTGCCACGCCTTCCATCCAGAGGAGAATGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR TCA 90 bp CGGCTGGTACACGAACACGGGGTACTCCGTGTCGCAGGGCTGCAGCGGGTCCTGTTGTGTTTGTGGGAGTaGTGGAAGACAAGCACCAGC +
Preference number: 2 (lower is better)
Translates to: RLVHEHGVLRVAGLQRVLLCLWE*WKTSTS
Trigger: GCTGGTGCTTGTCTTCCATCACTCCCACAAACACAA...CAGGACCCGCTGCAGCCCTGCGACACGGAGTACCCCGTGTTCGTGTACCAGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537923.5
ENST00000647066.1
3UTR-3UTR GCA 90 bp GCAGGAGTAGGGGCGGCGAGGCTGAGGTGTCCGAGGCGCCGCCGCAGTCCTGGGGTTCTAGCATTATTCTaGCACTTAAGCTGTCTTCGA +
Preference number: 2 (lower is better)
Translates to: AGVGAARLRCPRRRRSPGVLALF*HLSCLR
Trigger: TCGAAGACAGCTTAAGTGGCAGAATAATGCTAGAAC...CCCAGGACTGCGGCGGCGCCTCGGACACCTCAGCCTCGCCGCCCCTACTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537784.5
ENST00000646946.1
3UTR-3UTR GCA 90 bp GAACACGGGGTACTCCGTGTCGCAGGGCTGCAGCGGGTCCTGCTTCTTGTGTTTTCACCGCCACAGCTGTaGTTGCCGTCACCACCATGG +
Preference number: 2 (lower is better)
Translates to: EHGVLRVAGLQRVLLLVFSPPQL*LPSPPW
Trigger: CCATGGTGGTGACGGCAAGCACAGCTGTGGCGGTGA...AAACACAAGAAGCAGGACCCGCTGCAGCCCTGCGACACGGAGTACCCCGTGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
3UTR-3UTR CCA 90 bp GTGCCAGGTGATTGGTTTCCTGTTCCATCCAGCATTCTCCGGAGCCAGGGGCCAAGAGGAGCGTTGGCCTaGGGGCGACCCAACTGCAGT +
Preference number: 2 (lower is better)
Translates to: VPGDWFPVPSSILRSQGPRGALA*GRPNCS
Trigger: ACTGCAGTTGGGTCGCCCCCAGGCCAACGCTCCTCT...TGGCCCCTGGCTCCGGAGAATGCTGGATGGAACAGGAAACCAATCACCTGGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000587995.5
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CCA 90 bp TCACCTTGCCAAAACACAGGTCAGGCTGGGTGGTGTCACCGCAGGAGTTGGGGCGGCCAGGGCCAGGTCTaGGTGAAGCAAGTCATGCAG +
Preference number: 2 (lower is better)
Translates to: SPCQNTGQAGWCHRRSWGGQGQV*VKQVMQ
Trigger: CTGCATGACTTGCTTCACCCAGACCTGGCCCTGGCC...GCCCCAACTCCTGCGGTGACACCACCCAGCCTGACCTGTGTTTTGGCAAGGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
3UTR-3UTR TCA 90 bp GGCCCATCCACAGTGCTGCACTGCAGCAATGGCTGTCCTCTTGTCCACGGTCACAGTGGCCTCCCACCATaGGCCTCACTTTGGGGAATC +
Preference number: 2 (lower is better)
Translates to: GPSTVLHCSNGCPLVHGHSGLPP*ASLWGI
Trigger: GATTCCCCAAAGTGAGGCTCATGGTGGGAGGCCACT...GTGACCGTGGACAAGAGGACAGCCATTGCTGCAGTGCAGCACTGTGGATGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
3UTR-3UTR CCA 90 bp GAGGCTGAGGTGTCCGAGGCGCCGCCGCAGTCCTGGGCATTCTCCTCTGGATGGGCTGACTTTTTGGGATaGCTCTGGAAGGATCACCTT +
Preference number: 2 (lower is better)
Translates to: EAEVSEAPPQSWAFSSGWADFLG*LWKDHL
Trigger: AAGGTGATCCTTCCAGAGCCATCCCAAAAAGTCAGC...CCATCCAGAGGAGAATGCCCAGGACTGCGGCGGCGCCTCGGACACCTCAGCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CCA 90 bp CCCGTTGGCCTCCCGGATGGCCGGCTGGTACACGAACACGGGGTACTCCGTGTCGCTGACTTTTTGGGATaGCTCTGGAAGGATCACCTT +
Preference number: 2 (lower is better)
Translates to: PVGLPDGRLVHEHGVLRVADFLG*LWKDHL
Trigger: AAGGTGATCCTTCCAGAGCCATCCCAAAAAGTCAGC...GACACGGAGTACCCCGTGTTCGTGTACCAGCCGGCCATCCGGGAGGCCAACGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CCA 90 bp GGTACACGAACACGGGGTACTCCGTGTCGCAGGGCTGCAGCGGGTCCTGCTTCTGTGGTGCCAGGTGATTaGTTTCCTGTTCCATCCAGC +
Preference number: 2 (lower is better)
Translates to: GTRTRGTPCRRAAAGPASVVPGD*FPVPSS
Trigger: GCTGGATGGAACAGGAAACCAATCACCTGGCACCAC...AGAAGCAGGACCCGCTGCAGCCCTGCGACACGGAGTACCCCGTGTTCGTGTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CCA 90 bp CATTCTCCTCTGGATGGAAGGCGTGGCAGGAGTCTGGTCGCCGGCGGAGCTTCTAAGCTGAGCTCACGCTaGCTTCCCGAAGAGGAGACA +
Preference number: 2 (lower is better)
Translates to: HSPLDGRRGRSLVAGGASKLSSR*LPEEET
Trigger: TGTCTCCTCTTCGGGAAGCCAGCGTGAGCTCAGCTT...AGAAGCTCCGCCGGCGACCAGACTCCTGCCACGCCTTCCATCCAGAGGAGAATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CCA 90 bp ATTCTCCTCTGGATGGAAGGCGTGGCAGGAGTCTGGTCGCCGGCGGAGCTTCTGATCATGGCCTCTAGCTaGCTGAGCTTCCGGTGGTCT +
Preference number: 2 (lower is better)
Translates to: ILLWMEGVAGVWSPAELLIMASS*LSFRWS
Trigger: AGACCACCGGAAGCTCAGCCAGCTAGAGGCCATGAT...CAGAAGCTCCGCCGGCGACCAGACTCCTGCCACGCCTTCCATCCAGAGGAGAAT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
3UTR-3UTR CCA 90 bp GAACACGGGGTACTCCGTGTCGCAGGGCTGCAGCGGGTCCTGCTTCTTGTGTTTTTCACCCGCACTTTCTaGTCCTTCTGCCCAGCGGAG +
Preference number: 2 (lower is better)
Translates to: EHGVLRVAGLQRVLLLVFFTRTF*SFCPAE
Trigger: CTCCGCTGGGCAGAAGGACCAGAAAGTGCGGGTGAA...AAACACAAGAAGCAGGACCCGCTGCAGCCCTGCGACACGGAGTACCCCGTGTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
3UTR-3UTR CCA 90 bp GTGGGAGTGATGGAAGACACTTTTGGCCTCGGCCCCTCTGTCGTACCAGGAGCCCAAGAAGGCAGAAATTaGGCTGACCAGGGGCTGGGC +
Preference number: 2 (lower is better)
Translates to: VGVMEDTFGLGPSVVPGAQEGRN*ADQGLG
Trigger: GCCCAGCCCCTGGTCAGCCCAATTTCTGCCTTCTTG...GGCTCCTGGTACGACAGAGGGGCCGAGGCCAAAAGTGTCTTCCATCACTCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR TCA 90 bp GCTCTGGAAGGATCACCTTGCCAAAACACAGGTCAGGCTGGGTGGTGTCACCGCAGTGGCCTCCCACCATaGGCCTCACTTTGGGGAATC +
Preference number: 2 (lower is better)
Translates to: ALEGSPCQNTGQAGWCHRSGLPP*ASLWGI
Trigger: GATTCCCCAAAGTGAGGCTCATGGTGGGAGGCCACT...GCGGTGACACCACCCAGCCTGACCTGTGTTTTGGCAAGGTGATCCTTCCAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR TCA 90 bp AGGCTGAGGTGTCCGAGGCGCCGCCGCAGTCCTGGGCATTCTCCTCTGGATGGACTGGGTCAATATCTGTaGTGCAGTAGATCCAGTCAC +
Preference number: 2 (lower is better)
Translates to: RLRCPRRRRSPGHSPLDGLGQYL*CSRSSH
Trigger: GTGACTGGATCTACTGCATCACAGATATTGACCCAG...TCCATCCAGAGGAGAATGCCCAGGACTGCGGCGGCGCCTCGGACACCTCAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
3UTR-3UTR CCA 90 bp TGGGCATTCTCCTCTGGATGGAAGGCGTGGCAGGAGTCTGGTCGCCGGCGGAGCGCTGACTTTTTGGGATaGCTCTGGAAGGATCACCTT +
Preference number: 2 (lower is better)
Translates to: WAFSSGWKAWQESGRRRSADFLG*LWKDHL
Trigger: AAGGTGATCCTTCCAGAGCCATCCCAAAAAGTCAGC...GCTCCGCCGGCGACCAGACTCCTGCCACGCCTTCCATCCAGAGGAGAATGCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CCA 90 bp CATTCTCCTCTGGATGGAAGGCGTGGCAGGAGTCTGGTCGCCGGCGGAGCTTCTGTGGTGCCAGGTGATTaGTTTCCTGTTCCATCCAGC +
Preference number: 2 (lower is better)
Translates to: HSPLDGRRGRSLVAGGASVVPGD*FPVPSS
Trigger: GCTGGATGGAACAGGAAACCAATCACCTGGCACCAC...AGAAGCTCCGCCGGCGACCAGACTCCTGCCACGCCTTCCATCCAGAGGAGAATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CCA 90 bp TCACCTTGCCAAAACACAGGTCAGGCTGGGTGGTGTCACCGCAGGAGTTGGGGCTTGCCGTCACCACCATaGGTTCACCCGCACTTTCTG +
Preference number: 2 (lower is better)
Translates to: SPCQNTGQAGWCHRRSWGLPSPP*VHPHFL
Trigger: CAGAAAGTGCGGGTGAACCCATGGTGGTGACGGCAA...GCCCCAACTCCTGCGGTGACACCACCCAGCCTGACCTGTGTTTTGGCAAGGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
3UTR-3UTR TCA 90 bp CAAGCTGAGCTCACGCTGGCTTCCCGAAGAGGAGACAGGAAGGTTAGGTCAGAACAGCAGCTAGGAAGGTaGGTGGCCTCCCACCATGAG +
Preference number: 2 (lower is better)
Translates to: QAELTLASRRGDRKVRSEQQLGR*VASHHE
Trigger: CTCATGGTGGGAGGCCACTCACCTTCCTAGCTGCTG...TTCTGACCTAACCTTCCTGTCTCCTCTTCGGGAAGCCAGCGTGAGCTCAGCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CCA 90 bp CTCAGTACCCAGAAGTCCTTGGGTTCTACCAGAGACCACTCCGACAGAAAGGGTAGAGGAGCGTTGGCCTaGGGGCGACCCAACTGCAGT +
Preference number: 2 (lower is better)
Translates to: LSTQKSLGSTRDHSDRKGRGALA*GRPNCS
Trigger: ACTGCAGTTGGGTCGCCCCCAGGCCAACGCTCCTCT...ACCCTTTCTGTCGGAGTGGTCTCTGGTAGAACCCAAGGACTTCTGGGTACTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000587995.5
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CCA 90 bp CAACTGCAGTTAGCTGCATCCCATGTCAGTGCTGACTTTTTGGGATGGCTCTGGCGCCGGCGGAGCTTCTaGGAGCGCATCCGGTCACAT +
Preference number: 2 (lower is better)
Translates to: QLQLAASHVSADFLGWLWRRRSF*ERIRSH
Trigger: ATGTGACCGGATGCGCTCCCAGAAGCTCCGCCGGCG...CCAGAGCCATCCCAAAAAGTCAGCACTGACATGGGATGCAGCTAACTGCAGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR TCA 90 bp ACACAGTCAAAACCTTTTCGAGCAGCAGCTAGGAAGGTGAGTGGCCTCCCACCACAGCAGCTAGGAAGGTaGGTGGCCTCCCACCATGAG +
Preference number: 2 (lower is better)
Translates to: TQSKPFRAAARKVSGLPPQQLGR*VASHHE
Trigger: CTCATGGTGGGAGGCCACTCACCTTCCTAGCTGCTG...TGGTGGGAGGCCACTCACCTTCCTAGCTGCTGCTCGAAAAGGTTTTGACTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR GCA 90 bp GGAATCTGCTGCACCACAAATACCTTCTGGCAGGGCCCGCACTCCACGATCCCGGCCTCATTCTGCTGCTaGTTCTCAGTACCCAGAAGT +
Preference number: 2 (lower is better)
Translates to: GICCTTNTFWQGPHSTIPASFCC*FSVPRS
Trigger: ACTTCTGGGTACTGAGAAGCAGCAGCAGAATGAGGC...CGGGATCGTGGAGTGCGGGCCCTGCCAGAAGGTATTTGTGGTGCAGCAGATTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR GCA 90 bp GGTCTGTCACCAGGAGGAGGAGGTTACTGTTGGGAATCTGCTGCACCACAAATAACAAGCACCAGCTCCTaGAGCAGCCACCTGGTCGCC +
Preference number: 2 (lower is better)
Translates to: GLSPGGGGYCWESAAPQITSTSS*SSHLVA
Trigger: GGCGACCAGGTGGCTGCTGCAGGAGCTGGTGCTTGT...TATTTGTGGTGCAGCAGATTCCCAACAGTAACCTCCTCCTCCTGGTGACAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537923.5
ENST00000647066.1
3UTR-3UTR CCA 90 bp ACAAATACCTTCTGGCAGGGCCCGCACTCCACGATCCCGTTGGCCTCCCGGATGGCTGACTTTTTGGGATaGCTCTGGAAGGATCACCTT +
Preference number: 2 (lower is better)
Translates to: TNTFWQGPHSTIPLASRMADFLG*LWKDHL
Trigger: AAGGTGATCCTTCCAGAGCCATCCCAAAAAGTCAGC...CATCCGGGAGGCCAACGGGATCGTGGAGTGCGGGCCCTGCCAGAAGGTATTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CCA 90 bp ACGAACACGGGGTACTCCGTGTCGCAGGGCTGCAGCGGGTCCTGCTTCTTGTGTGCTGACTTTTTGGGATaGCTCTGGAAGGATCACCTT +
Preference number: 2 (lower is better)
Translates to: TNTGYSVSQGCSGSCFLCADFLG*LWKDHL
Trigger: AAGGTGATCCTTCCAGAGCCATCCCAAAAAGTCAGC...ACACAAGAAGCAGGACCCGCTGCAGCCCTGCGACACGGAGTACCCCGTGTTCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CCA 90 bp TGGAGACTGTTGTCTCCTGGGATCCAGGTCTTGGGGTTTGGTCGGGGGAGGAAGGTGGTGCCAGGTGATTaGTTTCCTGTTCCATCCAGC +
Preference number: 2 (lower is better)
Translates to: WRLLSPGIQVLGFGRGRKVVPGD*FPVPSS
Trigger: GCTGGATGGAACAGGAAACCAATCACCTGGCACCAC...CTTCCTCCCCCGACCAAACCCCAAGACCTGGATCCCAGGAGACAACAGTCTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382722.10
ENST00000537784.5
ENST00000645018.2
ENST00000646946.1
3UTR CAA 90 bp CCCATGTCAGTGCTGACTTTTTGGGATGGCTCTGGAAGGATCACCTaGCCAAAACACAGGTCAGGCTGGGTGGTGTCACCGCAGGAGTTG +
Preference number: 2 (lower is better)
Translates to: PMSVLTFWDGSGRIT*PKHRSGWVVSPQEL
Trigger: CAACTCCTGCGGTGACACCACCCAGCCTGACCTGTGTTTTGGCAAGGTGATCCTTCCAGAGCCATCCCAAAAAGTCAGCACTGACATGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR TCA 90 bp GTGGGAGTGATGGAAGACACTTTTGGCCTCGGCCCCTCTGTCGTACCAGGAGCCCACCATGAAGCATCTTaGAAGTGGTGCCAGGTGATT +
Preference number: 2 (lower is better)
Translates to: VGVMEDTFGLGPSVVPGAHHEAS*KWCQVI
Trigger: AATCACCTGGCACCACTTTCAAGATGCTTCATGGTG...GGCTCCTGGTACGACAGAGGGGCCGAGGCCAAAAGTGTCTTCCATCACTCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR GCA 90 bp GCTCTGGAAGGATCACCTTGCCAAAACACAGGTCAGGCTGGGTGGTGTCACCGCCATTTGGCCTCATTCTaGTGCTGCTTCTCAGTACCC +
Preference number: 2 (lower is better)
Translates to: ALEGSPCQNTGQAGWCHRHLASF*CCFSVP
Trigger: GGGTACTGAGAAGCAGCAGCAGAATGAGGCCAAATG...GCGGTGACACCACCCAGCCTGACCTGTGTTTTGGCAAGGTGATCCTTCCAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR GCA 90 bp GTAAACCTTAGCTGTTCTAGCATTATTCTGCCACTTAAGCTGTCTTCGAGCTGCGTCGGGGGAGGAAGCTaGGGGGCCTTGGGACCCTGG +
Preference number: 2 (lower is better)
Translates to: VNLSCSSIILPLKLSSSCVGGGS*GALGPW
Trigger: CCAGGGTCCCAAGGCCCCGCAGCTTCCTCCCCCGAC...GCAGCTCGAAGACAGCTTAAGTGGCAGAATAATGCTAGAACAGCTAAGGTTTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000382722.10
ENST00000537784.5
ENST00000645018.2
ENST00000646946.1
3UTR-3UTR GCA 90 bp TCTTCCCGTCTCTCGGGACCTCTTGGAGATCAGAATGAACCCGTTGTTGTCGATAGCCCACGAACAAGCTaGTTCTCAGGAGGCCAGCCC +
Preference number: 2 (lower is better)
Translates to: SSRLSGPLGDQNEPVVVDSPRTS*FSGGQP
Trigger: GGGCTGGCCTCCTGAGAAGCAGCTTGTTCGTGGGCT...ATCGACAACAACGGGTTCATTCTGATCTCCAAGAGGTCCCGAGAGACGGGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
3UTR-3UTR CCA 90 bp TGGCTTCCCGAAGAGGAGACAGGAAGGTTAGGTCAGAAGTATGCTCATGTTGAGAGAGGAGCGTTGGCCTaGGGGCGACCCAACTGCAGT +
Preference number: 2 (lower is better)
Translates to: WLPEEETGRLGQKYAHVERGALA*GRPNCS
Trigger: ACTGCAGTTGGGTCGCCCCCAGGCCAACGCTCCTCT...CTCAACATGAGCATACTTCTGACCTAACCTTCCTGTCTCCTCTTCGGGAAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000587995.5
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CCA 90 bp TCCAAGCTGAGCTCACGCTGGCTTCCCGAAGAGGAGACAGGAAGGTTAGGTCAGGTGGTGCCAGGTGATTaGTTTCCTGTTCCATCCAGC +
Preference number: 2 (lower is better)
Translates to: SKLSSRWLPEEETGRLGQVVPGD*FPVPSS
Trigger: GCTGGATGGAACAGGAAACCAATCACCTGGCACCAC...CTGACCTAACCTTCCTGTCTCCTCTTCGGGAAGCCAGCGTGAGCTCAGCTTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000587995.5
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CCA 90 bp GGAATCTGCTGCACCACAAATACCTTCTGGCAGGGCCCGCACTCCACGATCCCGCTGGGGTTTGTTAAATaGAAAGATTTGAGGCCGGCC +
Preference number: 2 (lower is better)
Translates to: GICCTTNTFWQGPHSTIPLGFVK*KDLRPA
Trigger: GGCCGGCCTCAAATCTTTCCATTTAACAAACCCCAG...CGGGATCGTGGAGTGCGGGCCCTGCCAGAAGGTATTTGTGGTGCAGCAGATTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537784.5
ENST00000646946.1
3UTR-3UTR CCA 90 bp ACACAGTCAAAACCTTTTCGAGCAGCAGCTAGGAAGGTGAGTGGCCTCCCACCACAAGAAGGCAGAAATTaGGCTGACCAGGGGCTGGGC +
Preference number: 2 (lower is better)
Translates to: TQSKPFRAAARKVSGLPPQEGRN*ADQGLG
Trigger: GCCCAGCCCCTGGTCAGCCCAATTTCTGCCTTCTTG...TGGTGGGAGGCCACTCACCTTCCTAGCTGCTGCTCGAAAAGGTTTTGACTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CCA 90 bp GGTTCTACCAGAGACCACTCCGACAGAAAGGGTCAGAAACAACTGACCCTTTCTTCCCGGATGGCCGGCTaGTACACGAACACGGGGTAC +
Preference number: 2 (lower is better)
Translates to: GSTRDHSDRKGQKQLTLSSRMAG*YTNTGY
Trigger: GTACCCCGTGTTCGTGTACCAGCCGGCCATCCGGGA...AGAAAGGGTCAGTTGTTTCTGACCCTTTCTGTCGGAGTGGTCTCTGGTAGAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CCA 90 bp TGGCATTTGGCCTACTCTAGAGGCAAGTTAGGGCTATTTGCTGGTAGGAAACTTGGCGTGGCAGGAGTCTaGTCGCCGGCGGAGCTTCTG +
Preference number: 2 (lower is better)
Translates to: WHLAYSRGKLGLFAGRKLGVAGV*SPAELL
Trigger: CAGAAGCTCCGCCGGCGACCAGACTCCTGCCACGCC...AAGTTTCCTACCAGCAAATAGCCCTAACTTGCCTCTAGAGTAGGCCAAATGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537784.5
ENST00000646946.1
3UTR CAA 90 bp TTCTCCATGGCTTTGCCCTTAATGTTGCTCTCACTGTGGAGACTGTaGTCTCCTGGGATCCAGGTCTTGGGGTTTGGTCGGGGGAGGAAG +
Preference number: 2 (lower is better)
Translates to: FSMALPLMLLSLWRL*SPGIQVLGFGRGRK
Trigger: CTTCCTCCCCCGACCAAACCCCAAGACCTGGATCCCAGGAGACAACAGTCTCCACAGTGAGAGCAACATTAAGGGCAAAGCCATGGAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382722.10
ENST00000537784.5
ENST00000645018.2
ENST00000646946.1
3UTR CAA 90 bp CTTCCCGTCTCTCGGGACCTCTTGGAGATCAGAATGAACCCGTTGTaGTCGATGACGAAGCAGTCCAGATCACTGTCCTCGCAGCTCTGT +
Preference number: 2 (lower is better)
Translates to: LPVSRDLLEIRMNPL*SMTKQSRSLSSQLC
Trigger: ACAGAGCTGCGAGGACAGTGATCTGGACTGCTTCGTCATCGACAACAACGGGTTCATTCTGATCTCCAAGAGGTCCCGAGAGACGGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
3UTR-3UTR TCA 90 bp TCCAAGCTGAGCTCACGCTGGCTTCCCGAAGAGGAGACAGGAAGGTTAGGTCAGGAAAGTGGTGCCAGGTaGTTGGTTTCCTGTTCCATC +
Preference number: 2 (lower is better)
Translates to: SKLSSRWLPEEETGRLGQESGAR*LVSCSI
Trigger: GATGGAACAGGAAACCAATCACCTGGCACCACTTTC...CTGACCTAACCTTCCTGTCTCCTCTTCGGGAAGCCAGCGTGAGCTCAGCTTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000587995.5
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR TCA 90 bp ACAGAGGCATTATATTTGACTTCTGTCGCCTCCTGCAGCACTGGTGGGAAGATGTGTCTTGGTCCAAGCTaGGCTCACGCTGGCTTCCCG +
Preference number: 2 (lower is better)
Translates to: TEALYLTSVASCSTGGKMCLGPS*AHAGFP
Trigger: CGGGAAGCCAGCGTGAGCTCAGCTTGGACCAAGACA...CATCTTCCCACCAGTGCTGCAGGAGGCGACAGAAGTCAAATATAATGCCTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR TCA 90 bp TCTGTCACCAGGAGGAGGAGGTTACTGTTGGGAATCTGCTGCACCACAAATACCGCTGCACTGTGGTGGTaGCTCGAGGGTTTGCACATG +
Preference number: 2 (lower is better)
Translates to: SVTRRRRLLLGICCTTNTAALWW*LEGLHM
Trigger: CATGTGCAAACCCTCGAGTCACCACCACAGTGCAGC...GGTATTTGTGGTGCAGCAGATTCCCAACAGTAACCTCCTCCTCCTGGTGACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000537923.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
ENST00000647066.1
3UTR-3UTR CCA 90 bp GTGCCAGGTGATTGGTTTCCTGTTCCATCCAGCATTCTCCGGAGCCAGGGGCCAGCTGACTTTTTGGGATaGCTCTGGAAGGATCACCTT +
Preference number: 2 (lower is better)
Translates to: VPGDWFPVPSSILRSQGPADFLG*LWKDHL
Trigger: AAGGTGATCCTTCCAGAGCCATCCCAAAAAGTCAGC...TGGCCCCTGGCTCCGGAGAATGCTGGATGGAACAGGAAACCAATCACCTGGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000587995.5
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CCA 90 bp GAAAGGGGTGTCGCTGATGTCCGTGAAGAAGTAGTCATTGGTCAGGAAAAGAACAGAGGAGCGTTGGCCTaGGGGCGACCCAACTGCAGT +
Preference number: 2 (lower is better)
Translates to: ERGVADVREEVVIGQEKNRGALA*GRPNCS
Trigger: ACTGCAGTTGGGTCGCCCCCAGGCCAACGCTCCTCT...GTTCTTTTCCTGACCAATGACTACTTCTTCACGGACATCAGCGACACCCCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
3UTR-3UTR CCA 90 bp CAAGCTGAGCTCACGCTGGCTTCCCGAAGAGGAGACAGGAAGGTTAGGTCAGAAGTGGTGCCAGGTGATTaGTTTCCTGTTCCATCCAGC +
Preference number: 2 (lower is better)
Translates to: QAELTLASRRGDRKVRSEVVPGD*FPVPSS
Trigger: GCTGGATGGAACAGGAAACCAATCACCTGGCACCAC...TTCTGACCTAACCTTCCTGTCTCCTCTTCGGGAAGCCAGCGTGAGCTCAGCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000587995.5
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CCA 90 bp TCTGTCACCAGGAGGAGGAGGTTACTGTTGGGAATCTGCTGCACCACAAATACCGCTGCACTGCAGCAATaGCTGTCCTCTTGTCCACGG +
Preference number: 2 (lower is better)
Translates to: SVTRRRRLLLGICCTTNTAALQQ*LSSCPR
Trigger: CCGTGGACAAGAGGACAGCCATTGCTGCAGTGCAGC...GGTATTTGTGGTGCAGCAGATTCCCAACAGTAACCTCCTCCTCCTGGTGACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
3UTR-3UTR CCA 90 bp GCTGGGTCTGGACTCTGGAGTACAGGAAGAACTAAATTATTTTGTCTTGGTCCAGGCGTGGCAGGAGTCTaGTCGCCGGCGGAGCTTCTG +
Preference number: 2 (lower is better)
Translates to: AGSGLWSTGRTKLFCLGPGVAGV*SPAELL
Trigger: CAGAAGCTCCGCCGGCGACCAGACTCCTGCCACGCC...TGGACCAAGACAAAATAATTTAGTTCTTCCTGTACTCCAGAGTCCAGACCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR CAA 90 bp GCGACCCAACTGCAGTTAGCTGCATCCCATGTCAGTGCTGACTTTTaGGGATGGCTCTGGAAGGATCACCTTGCCAAAACACAGGTCAGG +
Preference number: 2 (lower is better)
Translates to: ATQLQLAASHVSADF*GWLWKDHLAKTQVR
Trigger: CCTGACCTGTGTTTTGGCAAGGTGATCCTTCCAGAGCCATCCCAAAAAGTCAGCACTGACATGGGATGCAGCTAACTGCAGTTGGGTCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000585385.5
ENST00000587995.5
ENST00000642253.1
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR CAA 90 bp AATCTTCCCGTCTCTCGGGACCTCTTGGAGATCAGAATGAACCCGTaGTTGTCGATGACGAAGCAGTCCAGATCACTGTCCTCGCAGCTC +
Preference number: 2 (lower is better)
Translates to: NLPVSRDLLEIRMNP*LSMTKQSRSLSSQL
Trigger: GAGCTGCGAGGACAGTGATCTGGACTGCTTCGTCATCGACAACAACGGGTTCATTCTGATCTCCAAGAGGTCCCGAGAGACGGGAAGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
3UTR-3UTR TCA 90 bp TCGCCGGCGGAGCTTCTGGGAGCGCATCCGGTCACATTTGACAGAGGCATTATACACCATGAAGCATCTTaGAAGTGGTGCCAGGTGATT +
Preference number: 2 (lower is better)
Translates to: SPAELLGAHPVTFDRGIIHHEAS*KWCQVI
Trigger: AATCACCTGGCACCACTTTCAAGATGCTTCATGGTG...TATAATGCCTCTGTCAAATGTGACCGGATGCGCTCCCAGAAGCTCCGCCGGCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR TCA 90 bp GTCCAAGCTGAGCTCACGCTGGCTTCCCGAAGAGGAGACAGGAAGGTTAGGTCACACCATGAAGCATCTTaGAAGTGGTGCCAGGTGATT +
Preference number: 2 (lower is better)
Translates to: VQAELTLASRRGDRKVRSHHEAS*KWCQVI
Trigger: AATCACCTGGCACCACTTTCAAGATGCTTCATGGTG...TGACCTAACCTTCCTGTCTCCTCTTCGGGAAGCCAGCGTGAGCTCAGCTTGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000587995.5
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR TCA 90 bp GGAGGAGGAGGTTACTGTTGGGAATCTGCTGCACCACAAATACCTTCTGGCAGGTGGTACCGGGCACCATaGAGCATCTTGAAAGTGGTG +
Preference number: 2 (lower is better)
Translates to: GGGGYCWESAAPQIPSGRWYRAP*SILKVV
Trigger: CACCACTTTCAAGATGCTTCATGGTGCCCGGTACCA...CCTGCCAGAAGGTATTTGTGGTGCAGCAGATTCCCAACAGTAACCTCCTCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR TCA 90 bp ATTTTGTCTTGGTCCAAGCTGAGCTCACGCTGGCTTCCCGAAGAGGAGACAGGATGGTACCGGGCACCATaGAGCATCTTGAAAGTGGTG +
Preference number: 2 (lower is better)
Translates to: ILSWSKLSSRWLPEEETGWYRAP*SILKVV
Trigger: CACCACTTTCAAGATGCTTCATGGTGCCCGGTACCA...TCCTGTCTCCTCTTCGGGAAGCCAGCGTGAGCTCAGCTTGGACCAAGACAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000587995.5
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR TCA 90 bp GGTTCTACCAGAGACCACTCCGACAGAAAGGGTCAGAAACAACTGACCCTTTCTGCTGCACTGTGGTGGTaGCTCGAGGGTTTGCACATG +
Preference number: 2 (lower is better)
Translates to: GSTRDHSDRKGQKQLTLSAALWW*LEGLHM
Trigger: CATGTGCAAACCCTCGAGTCACCACCACAGTGCAGC...AGAAAGGGTCAGTTGTTTCTGACCCTTTCTGTCGGAGTGGTCTCTGGTAGAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR GCA 90 bp CAAGCTGAGCTCACGCTGGCTTCCCGAAGAGGAGACAGGAAGGTTAGGTCAGAAGCCTCATTCTGCTGCTaGTTCTCAGTACCCAGAAGT +
Preference number: 2 (lower is better)
Translates to: QAELTLASRRGDRKVRSEASFCC*FSVPRS
Trigger: ACTTCTGGGTACTGAGAAGCAGCAGCAGAATGAGGC...TTCTGACCTAACCTTCCTGTCTCCTCTTCGGGAAGCCAGCGTGAGCTCAGCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000587995.5
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR GCA 90 bp ACGGGGTACTCCGTGTCGCAGGGCTGCAGCGGGTCCTGCTTCTTGTGTTTGTGGGTACATCAATTTCCATaGAGCAATTGGATGTCTCAG +
Preference number: 2 (lower is better)
Translates to: TGYSVSQGCSGSCFLCLWVHQFP*SNWMSQ
Trigger: CTGAGACATCCAATTGCTGCATGGAAATTGATGTAC...CCACAAACACAAGAAGCAGGACCCGCTGCAGCCCTGCGACACGGAGTACCCCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR GCA 90 bp TGGCTTCCCGAAGAGGAGACAGGAAGGTTAGGTCAGAAGTATGCTCATGTTGAGACGGCCCATCCACAGTaGTGCACTGCAGCAATGGCT +
Preference number: 2 (lower is better)
Translates to: WLPEEETGRLGQKYAHVETAHPQ*CTAAMA
Trigger: AGCCATTGCTGCAGTGCAGCACTGTGGATGGGCCGT...CTCAACATGAGCATACTTCTGACCTAACCTTCCTGTCTCCTCTTCGGGAAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
3UTR-3UTR CCA 90 bp TACTGTTGGGAATCTGCTGCACCACAAATACCTTCTGGCAGGGCCCGCACTCCACCTCATCTCTGCATTTaGCCTCATTCTGCTGCTGCT +
Preference number: 2 (lower is better)
Translates to: YCWESAAPQIPSGRARTPPHLCI*PHSAAA
Trigger: AGCAGCAGCAGAATGAGGCCAAATGCAGAGATGAGG...TGGAGTGCGGGCCCTGCCAGAAGGTATTTGTGGTGCAGCAGATTCCCAACAGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CCA 90 bp ACGGGGTACTCCGTGTCGCAGGGCTGCAGCGGGTCCTGCTTCTTGTGTTTGTGGGATGTCTCAGCCTATTaGCTTTTCATAGATGCAAAC +
Preference number: 2 (lower is better)
Translates to: TGYSVSQGCSGSCFLCLWDVSAY*LFIDAN
Trigger: GTTTGCATCTATGAAAAGCCAATAGGCTGAGACATC...CCACAAACACAAGAAGCAGGACCCGCTGCAGCCCTGCGACACGGAGTACCCCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CCA 90 bp AGCCCTGCATGCTGTCCATACCCATCACTGGGGTTTGTTAAATGGAAAGATTTGCCAGGTCTTGGGGTTTaGTCGGGGGAGGAAGCTGCG +
Preference number: 2 (lower is better)
Translates to: SPACCPYPSLGFVKWKDLPGLGV*SGEEAA
Trigger: CGCAGCTTCCTCCCCCGACCAAACCCCAAGACCTGG...CAAATCTTTCCATTTAACAAACCCCAGTGATGGGTATGGACAGCATGCAGGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000382722.10
ENST00000537784.5
ENST00000645018.2
ENST00000646946.1
3UTR-3UTR CCA 90 bp GGTTCTACCAGAGACCACTCCGACAGAAAGGGTCAGAAACAACTGACCCTTTCTCAAGAAGGCAGAAATTaGGCTGACCAGGGGCTGGGC +
Preference number: 2 (lower is better)
Translates to: GSTRDHSDRKGQKQLTLSQEGRN*ADQGLG
Trigger: GCCCAGCCCCTGGTCAGCCCAATTTCTGCCTTCTTG...AGAAAGGGTCAGTTGTTTCTGACCCTTTCTGTCGGAGTGGTCTCTGGTAGAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR TCA 90 bp TATTTTGTCTTGGTCCAAGCTGAGCTCACGCTGGCTTCCCGAAGAGGAGACAGGGAAAGTGGTGCCAGGTaGTTGGTTTCCTGTTCCATC +
Preference number: 2 (lower is better)
Translates to: YFVLVQAELTLASRRGDRESGAR*LVSCSI
Trigger: GATGGAACAGGAAACCAATCACCTGGCACCACTTTC...CCTGTCTCCTCTTCGGGAAGCCAGCGTGAGCTCAGCTTGGACCAAGACAAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000587995.5
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR TCA 90 bp TCTCAGTACCCAGAAGTCCTTGGGTTCTACCAGAGACCACTCCGACAGAAAGGGGAAAGTGGTGCCAGGTaGTTGGTTTCCTGTTCCATC +
Preference number: 2 (lower is better)
Translates to: SQYPEVLGFYQRPLRQKGESGAR*LVSCSI
Trigger: GATGGAACAGGAAACCAATCACCTGGCACCACTTTC...CCCTTTCTGTCGGAGTGGTCTCTGGTAGAACCCAAGGACTTCTGGGTACTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000587995.5
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR TCA 90 bp TCTTGGTCCAAGCTGAGCTCACGCTGGCTTCCCGAAGAGGAGACAGGAAGGTTACACCATGAAGCATCTTaGAAGTGGTGCCAGGTGATT +
Preference number: 2 (lower is better)
Translates to: SWSKLSSRWLPEEETGRLHHEAS*KWCQVI
Trigger: AATCACCTGGCACCACTTTCAAGATGCTTCATGGTG...TAACCTTCCTGTCTCCTCTTCGGGAAGCCAGCGTGAGCTCAGCTTGGACCAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000587995.5
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR TCA 90 bp AGAGACCACTCCGACAGAAAGGGTCAGAAACAACTGACCCTTTCTTGGCTGGGTAGGGTCAGAAACAACTaGCCCTTTCTTGGCTGGGTC +
Preference number: 2 (lower is better)
Translates to: RDHSDRKGQKQLTLSWLGRVRNN*PFLGWV
Trigger: GACCCAGCCAAGAAAGGGTCAGTTGTTTCTGACCCT...ACCCAGCCAAGAAAGGGTCAGTTGTTTCTGACCCTTTCTGTCGGAGTGGTCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000587995.5
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR GCA 90 bp ACACAGTCAAAACCTTTTCGAGCAGCAGCTAGGAAGGTGAGTGGCCTCCCACCAGCCTCATTCTGCTGCTaGTTCTCAGTACCCAGAAGT +
Preference number: 2 (lower is better)
Translates to: TQSKPFRAAARKVSGLPPASFCC*FSVPRS
Trigger: ACTTCTGGGTACTGAGAAGCAGCAGCAGAATGAGGC...TGGTGGGAGGCCACTCACCTTCCTAGCTGCTGCTCGAAAAGGTTTTGACTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR GCA 90 bp AGCCCTGCATGCTGTCCATACCCATCACTGGGGTTTGTTAAATGGAAAGATTTGTGGGGGAGATGTGTGTaGGCTGGGGGTGAGTTCCCA +
Preference number: 2 (lower is better)
Translates to: SPACCPYPSLGFVKWKDLWGRCV*AGGEFP
Trigger: TGGGAACTCACCCCCAGCGCACACACATCTCCCCCA...CAAATCTTTCCATTTAACAAACCCCAGTGATGGGTATGGACAGCATGCAGGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000382722.10
ENST00000537784.5
ENST00000645018.2
ENST00000646946.1
3UTR-3UTR CCA 90 bp TCCAAGCTGAGCTCACGCTGGCTTCCCGAAGAGGAGACAGGAAGGTTAGGTCAGTTTTTGGGATGGCTCTaGAAGGATCACCTTGCCAAA +
Preference number: 2 (lower is better)
Translates to: SKLSSRWLPEEETGRLGQFLGWL*KDHLAK
Trigger: TTTGGCAAGGTGATCCTTCCAGAGCCATCCCAAAAA...CTGACCTAACCTTCCTGTCTCCTCTTCGGGAAGCCAGCGTGAGCTCAGCTTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000587995.5
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CCA 90 bp TACTGTTGGGAATCTGCTGCACCACAAATACCTTCTGGCAGGGCCCGCACTCCAGCTGACTTTTTGGGATaGCTCTGGAAGGATCACCTT +
Preference number: 2 (lower is better)
Translates to: YCWESAAPQIPSGRARTPADFLG*LWKDHL
Trigger: AAGGTGATCCTTCCAGAGCCATCCCAAAAAGTCAGC...TGGAGTGCGGGCCCTGCCAGAAGGTATTTGTGGTGCAGCAGATTCCCAACAGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CCA 90 bp TCCTTGGGTTCTACCAGAGACCACTCCGACAGAAAGGGTCAGAAACAACTGACCGTGGTGCCAGGTGATTaGTTTCCTGTTCCATCCAGC +
Preference number: 2 (lower is better)
Translates to: SLGSTRDHSDRKGQKQLTVVPGD*FPVPSS
Trigger: GCTGGATGGAACAGGAAACCAATCACCTGGCACCAC...GGTCAGTTGTTTCTGACCCTTTCTGTCGGAGTGGTCTCTGGTAGAACCCAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000587995.5
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CCA 90 bp AGAAGTCCTTGGGTTCTACCAGAGACCACTCCGACAGAAAGGGTCAGAAACAACAAGCTGAGCTCACGCTaGCTTCCCGAAGAGGAGACA +
Preference number: 2 (lower is better)
Translates to: RSPWVLPETTPTERVRNNKLSSR*LPEEET
Trigger: TGTCTCCTCTTCGGGAAGCCAGCGTGAGCTCAGCTT...GTTGTTTCTGACCCTTTCTGTCGGAGTGGTCTCTGGTAGAACCCAAGGACTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000587995.5
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CCA 90 bp AAGTCCTTGGGTTCTACCAGAGACCACTCCGACAGAAAGGGTCAGAAACAACTGAAGCTGAGCTCACGCTaGCTTCCCGAAGAGGAGACA +
Preference number: 2 (lower is better)
Translates to: KSLGSTRDHSDRKGQKQLKLSSR*LPEEET
Trigger: TGTCTCCTCTTCGGGAAGCCAGCGTGAGCTCAGCTT...CAGTTGTTTCTGACCCTTTCTGTCGGAGTGGTCTCTGGTAGAACCCAAGGACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000587995.5
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CCA 90 bp CAAGCTGAGCTCACGCTGGCTTCCCGAAGAGGAGACAGGAAGGTTAGGTCAGAAGCTGGGTCTGGACTCTaGAGTACAGGAAGAACTAAA +
Preference number: 2 (lower is better)
Translates to: QAELTLASRRGDRKVRSEAGSGL*STGRTK
Trigger: TTTAGTTCTTCCTGTACTCCAGAGTCCAGACCCAGC...TTCTGACCTAACCTTCCTGTCTCCTCTTCGGGAAGCCAGCGTGAGCTCAGCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000587995.5
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CCA 90 bp CTCAGTACCCAGAAGTCCTTGGGTTCTACCAGAGACCACTCCGACAGAAAGGGTTTTCTTGGCTGGGTCTaGACTCTGGAGTACAGGAAG +
Preference number: 2 (lower is better)
Translates to: LSTQKSLGSTRDHSDRKGFLGWV*TLEYRK
Trigger: CTTCCTGTACTCCAGAGTCCAGACCCAGCCAAGAAA...ACCCTTTCTGTCGGAGTGGTCTCTGGTAGAACCCAAGGACTTCTGGGTACTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000587995.5
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CCA 90 bp AAAGTGGTGCCAGGTGATTGGTTTCCTGTTCCATCCAGCATTCTCCGGAGCCAGCCTCATCTCTGCATTTaGCCTCATTCTGCTGCTGCT +
Preference number: 2 (lower is better)
Translates to: KVVPGDWFPVPSSILRSQPHLCI*PHSAAA
Trigger: AGCAGCAGCAGAATGAGGCCAAATGCAGAGATGAGG...CTGGCTCCGGAGAATGCTGGATGGAACAGGAAACCAATCACCTGGCACCACTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000587995.5
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR CAA 90 bp CTGGGTCTGGACTCTGGAGTACAGGAAGAACTAAATTATTTTGTCTaGGTCCAAGCTGAGCTCACGCTGGCTTCCCGAAGAGGAGACAGG +
Preference number: 2 (lower is better)
Translates to: LGLDSGVQEELNYFV*VQAELTLASRRGDR
Trigger: CCTGTCTCCTCTTCGGGAAGCCAGCGTGAGCTCAGCTTGGACCAAGACAAAATAATTTAGTTCTTCCTGTACTCCAGAGTCCAGACCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000587995.5
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR CAA 90 bp GCATTTGGCCTCATTCTGCTGCTGCTTCTCAGTACCCAGAAGTCCTaGGGTTCTACCAGAGACCACTCCGACAGAAAGGGTCAGAAACAA +
Preference number: 2 (lower is better)
Translates to: AFGLILLLLLSTQKS*GSTRDHSDRKGQKQ
Trigger: TTGTTTCTGACCCTTTCTGTCGGAGTGGTCTCTGGTAGAACCCAAGGACTTCTGGGTACTGAGAAGCAGCAGCAGAATGAGGCCAAATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000587995.5
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR TCA 90 bp ACCCAGAAGTCCTTGGGTTCTACCAGAGACCACTCCGACAGAAAGGGTCAGAAAGAAAGTGGTGCCAGGTaGTTGGTTTCCTGTTCCATC +
Preference number: 2 (lower is better)
Translates to: TQKSLGSTRDHSDRKGQKESGAR*LVSCSI
Trigger: GATGGAACAGGAAACCAATCACCTGGCACCACTTTC...TTTCTGACCCTTTCTGTCGGAGTGGTCTCTGGTAGAACCCAAGGACTTCTGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000587995.5
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR TCA 90 bp TGGCTTCCCGAAGAGGAGACAGGAAGGTTAGGTCAGAAGTATGCTCATGTTGAGTGGTACCGGGCACCATaGAGCATCTTGAAAGTGGTG +
Preference number: 2 (lower is better)
Translates to: WLPEEETGRLGQKYAHVEWYRAP*SILKVV
Trigger: CACCACTTTCAAGATGCTTCATGGTGCCCGGTACCA...CTCAACATGAGCATACTTCTGACCTAACCTTCCTGTCTCCTCTTCGGGAAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000587995.5
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR TCA 90 bp AGAAGTCCTTGGGTTCTACCAGAGACCACTCCGACAGAAAGGGTCAGAAACAACAGGGTCAGAAACAACTaGCCCTTTCTTGGCTGGGTC +
Preference number: 2 (lower is better)
Translates to: RSPWVLPETTPTERVRNNRVRNN*PFLGWV
Trigger: GACCCAGCCAAGAAAGGGTCAGTTGTTTCTGACCCT...GTTGTTTCTGACCCTTTCTGTCGGAGTGGTCTCTGGTAGAACCCAAGGACTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000587995.5
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR TCA 90 bp GCTGGGTCTGGACTCTGGAGTACAGGAAGAACTAAATTATTTTGTCTTGGTCCAACTCCTCGGACATGTTaGGGGCCAGCGCTGTCCAGT +
Preference number: 2 (lower is better)
Translates to: AGSGLWSTGRTKLFCLGPTPRTC*GPALSS
Trigger: ACTGGACAGCGCTGGCCCTCAACATGTCCGAGGAGT...TGGACCAAGACAAAATAATTTAGTTCTTCCTGTACTCCAGAGTCCAGACCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
3UTR-3UTR GCA 90 bp TCTGTCACCAGGAGGAGGAGGTTACTGTTGGGAATCTGCTGCACCACAAATACCGCCTCATTCTGCTGCTaGTTCTCAGTACCCAGAAGT +
Preference number: 2 (lower is better)
Translates to: SVTRRRRLLLGICCTTNTASFCC*FSVPRS
Trigger: ACTTCTGGGTACTGAGAAGCAGCAGCAGAATGAGGC...GGTATTTGTGGTGCAGCAGATTCCCAACAGTAACCTCCTCCTCCTGGTGACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR GCA 90 bp ACACAGTCAAAACCTTTTCGAGCAGCAGCTAGGAAGGTGAGTGGCCTCCCACCAGTTGGGGCATATTCTTaGCTTAGCCTCATCTCTGCA +
Preference number: 2 (lower is better)
Translates to: TQSKPFRAAARKVSGLPPVGAYS*LSLISA
Trigger: TGCAGAGATGAGGCTAAGGCAAGAATATGCCCCAAC...TGGTGGGAGGCCACTCACCTTCCTAGCTGCTGCTCGAAAAGGTTTTGACTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR GCA 90 bp AAAGTGGTGCCAGGTGATTGGTTTCCTGTTCCATCCAGCATTCTCCGGAGCCAGGTTGGGGCATATTCTTaGCTTAGCCTCATCTCTGCA +
Preference number: 2 (lower is better)
Translates to: KVVPGDWFPVPSSILRSQVGAYS*LSLISA
Trigger: TGCAGAGATGAGGCTAAGGCAAGAATATGCCCCAAC...CTGGCTCCGGAGAATGCTGGATGGAACAGGAAACCAATCACCTGGCACCACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR GCA 90 bp AGCTGTTCTAGCATTATTCTGCCACTTAAGCTGTCTTCGAGCTGCAGTGTCTTCGCGCCCCAAAAGCCCTaGATGCTGTCCATACCCATC +
Preference number: 2 (lower is better)
Translates to: SCSSIILPLKLSSSCSVFAPQKP*MLSIPI
Trigger: GATGGGTATGGACAGCATGCAGGGCTTTTGGGGCGC...GAAGACACTGCAGCTCGAAGACAGCTTAAGTGGCAGAATAATGCTAGAACAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382722.10
ENST00000537784.5
ENST00000645018.2
ENST00000646946.1
3UTR-3UTR GCA 90 bp GTCACCAGGAGGAGGAGGTTACTGTTGGGAATCTGCTGCACCACAAATACCTTCGGTGACTCGAGGGTTTaGACATGGCCTGATAGTCAT +
Preference number: 2 (lower is better)
Translates to: VTRRRRLLLGICCTTNTFGDSRV*TWPDSH
Trigger: ATGACTATCAGGCCATGTGCAAACCCTCGAGTCACC...GAAGGTATTTGTGGTGCAGCAGATTCCCAACAGTAACCTCCTCCTCCTGGTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
3UTR-3UTR CCA 90 bp CGACAGAAAGGGTCAGAAACAACTGACCCTTTCTTGGCTGGGTCTGGACTCTGGGCTGACTTTTTGGGATaGCTCTGGAAGGATCACCTT +
Preference number: 2 (lower is better)
Translates to: RQKGSETTDPFLAGSGLWADFLG*LWKDHL
Trigger: AAGGTGATCCTTCCAGAGCCATCCCAAAAAGTCAGC...CCAGAGTCCAGACCCAGCCAAGAAAGGGTCAGTTGTTTCTGACCCTTTCTGTCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000587995.5
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CCA 90 bp AAAGTGGTGCCAGGTGATTGGTTTCCTGTTCCATCCAGCATTCTCCGGAGCCAGGCTGGGTCTGGACTCTaGAGTACAGGAAGAACTAAA +
Preference number: 2 (lower is better)
Translates to: KVVPGDWFPVPSSILRSQAGSGL*STGRTK
Trigger: TTTAGTTCTTCCTGTACTCCAGAGTCCAGACCCAGC...CTGGCTCCGGAGAATGCTGGATGGAACAGGAAACCAATCACCTGGCACCACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000587995.5
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CCA 90 bp CAACTGCAGTTAGCTGCATCCCATGTCAGTGCTGACTTTTTGGGATGGCTCTGGGGAGGAGGTTACTGTTaGGAATCTGCTGCACCACAA +
Preference number: 2 (lower is better)
Translates to: QLQLAASHVSADFLGWLWGGGYC*ESAAPQ
Trigger: TTGTGGTGCAGCAGATTCCCAACAGTAACCTCCTCC...CCAGAGCCATCCCAAAAAGTCAGCACTGACATGGGATGCAGCTAACTGCAGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR TCA 90 bp ACTGCCCTCACAGGGTTGTTGCAAGACATGACGGTAAGAGTGACATTCTGTAACTGGTACCGGGCACCATaGAGCATCTTGAAAGTGGTG +
Preference number: 2 (lower is better)
Translates to: TALTGLLQDMTVRVTFCNWYRAP*SILKVV
Trigger: CACCACTTTCAAGATGCTTCATGGTGCCCGGTACCA...GTTACAGAATGTCACTCTTACCGTCATGTCTTGCAACAACCCTGTGAGGGCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382722.10
ENST00000537784.5
ENST00000645018.2
ENST00000646946.1
3UTR-3UTR TCA 90 bp TCTGTCACCAGGAGGAGGAGGTTACTGTTGGGAATCTGCTGCACCACAAATACCGAAGTATGCTCATGTTaGGACCTAGGGCAGATGGTA +
Preference number: 2 (lower is better)
Translates to: SVTRRRRLLLGICCTTNTEVCSC*DLGQMV
Trigger: TACCATCTGCCCTAGGTCTCAACATGAGCATACTTC...GGTATTTGTGGTGCAGCAGATTCCCAACAGTAACCTCCTCCTCCTGGTGACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR GCA 90 bp TGGCTTCCCGAAGAGGAGACAGGAAGGTTAGGTCAGAAGTATGCTCATGTTGAGGCCTCATTCTGCTGCTaGTTCTCAGTACCCAGAAGT +
Preference number: 2 (lower is better)
Translates to: WLPEEETGRLGQKYAHVEASFCC*FSVPRS
Trigger: ACTTCTGGGTACTGAGAAGCAGCAGCAGAATGAGGC...CTCAACATGAGCATACTTCTGACCTAACCTTCCTGTCTCCTCTTCGGGAAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000587995.5
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR GCA 90 bp AGAGACCACTCCGACAGAAAGGGTCAGAAACAACTGACCCTTTCTTGGCTGGGTGTTGGGGCATATTCTTaGCTTAGCCTCATCTCTGCA +
Preference number: 2 (lower is better)
Translates to: RDHSDRKGQKQLTLSWLGVGAYS*LSLISA
Trigger: TGCAGAGATGAGGCTAAGGCAAGAATATGCCCCAAC...ACCCAGCCAAGAAAGGGTCAGTTGTTTCTGACCCTTTCTGTCGGAGTGGTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CCA 90 bp GGAGGAGGAGGTTACTGTTGGGAATCTGCTGCACCACAAATACCTTCTGGCAGGTTTTTGGGATGGCTCTaGAAGGATCACCTTGCCAAA +
Preference number: 2 (lower is better)
Translates to: GGGGYCWESAAPQIPSGRFLGWL*KDHLAK
Trigger: TTTGGCAAGGTGATCCTTCCAGAGCCATCCCAAAAA...CCTGCCAGAAGGTATTTGTGGTGCAGCAGATTCCCAACAGTAACCTCCTCCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CCA 90 bp GACAGAGGCATTATATTTGACTTCTGTCGCCTCCTGCAGCACTGGTGGGAAGATTTTCTTGGCTGGGTCTaGACTCTGGAGTACAGGAAG +
Preference number: 2 (lower is better)
Translates to: DRGIIFDFCRLLQHWWEDFLGWV*TLEYRK
Trigger: CTTCCTGTACTCCAGAGTCCAGACCCAGCCAAGAAA...ATCTTCCCACCAGTGCTGCAGGAGGCGACAGAAGTCAAATATAATGCCTCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CCA 90 bp TGGCTTCCCGAAGAGGAGACAGGAAGGTTAGGTCAGAAGTATGCTCATGTTGAGGTACCCAGAAGTCCTTaGGTTCTACCAGAGACCACT +
Preference number: 2 (lower is better)
Translates to: WLPEEETGRLGQKYAHVEVPRSP*VLPETT
Trigger: AGTGGTCTCTGGTAGAACCCAAGGACTTCTGGGTAC...CTCAACATGAGCATACTTCTGACCTAACCTTCCTGTCTCCTCTTCGGGAAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000587995.5
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CCA 90 bp AGAGGCATTATATTTGACTTCTGTCGCCTCCTGCAGCACTGGTGGGAAGATGCTCCTCATCTCTGCATTTaGCCTCATTCTGCTGCTGCT +
Preference number: 2 (lower is better)
Translates to: RGIIFDFCRLLQHWWEDAPHLCI*PHSAAA
Trigger: AGCAGCAGCAGAATGAGGCCAAATGCAGAGATGAGG...AGCATCTTCCCACCAGTGCTGCAGGAGGCGACAGAAGTCAAATATAATGCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CCA 90 bp AGAGACCACTCCGACAGAAAGGGTCAGAAACAACTGACCCTTTCTTGGCTGGGTCCCTGCTTAGCAAGTTaGAATGTTCCCACAAGTTCC +
Preference number: 2 (lower is better)
Translates to: RDHSDRKGQKQLTLSWLGPCLAS*NVPTSS
Trigger: GGAACTTGTGGGAACATTCCAACTTGCTAAGCAGGG...ACCCAGCCAAGAAAGGGTCAGTTGTTTCTGACCCTTTCTGTCGGAGTGGTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382722.10
ENST00000537784.5
ENST00000645018.2
ENST00000646946.1
3UTR-3UTR CCA 90 bp AGCTGTTCTAGCATTATTCTGCCACTTAAGCTGTCTTCGAGCTGCAGTGTCTTCCTCCTGCAGCACTGGTaGGAAGATGCTGCAGTCACA +
Preference number: 2 (lower is better)
Translates to: SCSSIILPLKLSSSCSVFLLQHW*EDAAVT
Trigger: TGTGACTGCAGCATCTTCCCACCAGTGCTGCAGGAG...GAAGACACTGCAGCTCGAAGACAGCTTAAGTGGCAGAATAATGCTAGAACAGCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537784.5
ENST00000646946.1
3UTR CAA 90 bp GCATGCTGTCCATACCCATCACTGGGGTTTGTTAAATGGAAAGATTaGAGGCCGGCCTCTCCCACATTTCTCCATGGCTTTGCCCTTAAT +
Preference number: 2 (lower is better)
Translates to: ACCPYPSLGFVKWKD*RPASPTFLHGFALN
Trigger: ATTAAGGGCAAAGCCATGGAGAAATGTGGGAGAGGCCGGCCTCAAATCTTTCCATTTAACAAACCCCAGTGATGGGTATGGACAGCATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382722.10
ENST00000537784.5
ENST00000645018.2
ENST00000646946.1
3UTR-3UTR TCA 90 bp TGGCTTCCCGAAGAGGAGACAGGAAGGTTAGGTCAGAAGTATGCTCATGTTGAGCACCATGAAGCATCTTaGAAGTGGTGCCAGGTGATT +
Preference number: 2 (lower is better)
Translates to: WLPEEETGRLGQKYAHVEHHEAS*KWCQVI
Trigger: AATCACCTGGCACCACTTTCAAGATGCTTCATGGTG...CTCAACATGAGCATACTTCTGACCTAACCTTCCTGTCTCCTCTTCGGGAAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000587995.5
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR TCA 90 bp ATGGATTTCATTCCTTTCTCAGTCTTGACCATTCCCTTACCCAACCCCCACCCCCACCATGAAGCATCTTaGAAGTGGTGCCAGGTGATT +
Preference number: 2 (lower is better)
Translates to: MDFIPFSVLTIPLPNPHPHHEAS*KWCQVI
Trigger: AATCACCTGGCACCACTTTCAAGATGCTTCATGGTG...GGGGTGGGGGTTGGGTAAGGGAATGGTCAAGACTGAGAAAGGAATGAAATCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR TCA 90 bp TGGCTTCCCGAAGAGGAGACAGGAAGGTTAGGTCAGAAGTATGCTCATGTTGAGGAAGTATGCTCATGTTaGGACCTAGGGCAGATGGTA +
Preference number: 2 (lower is better)
Translates to: WLPEEETGRLGQKYAHVEEVCSC*DLGQMV
Trigger: TACCATCTGCCCTAGGTCTCAACATGAGCATACTTC...CTCAACATGAGCATACTTCTGACCTAACCTTCCTGTCTCCTCTTCGGGAAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000587995.5
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CCA 90 bp ACAGAGGCATTATATTTGACTTCTGTCGCCTCCTGCAGCACTGGTGGGAAGATGGCTGACTTTTTGGGATaGCTCTGGAAGGATCACCTT +
Preference number: 2 (lower is better)
Translates to: TEALYLTSVASCSTGGKMADFLG*LWKDHL
Trigger: AAGGTGATCCTTCCAGAGCCATCCCAAAAAGTCAGC...CATCTTCCCACCAGTGCTGCAGGAGGCGACAGAAGTCAAATATAATGCCTCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CCA 90 bp GAAGAACTAAATTATTTTGTCTTGGTCCAAGCTGAGCTCACGCTGGCTTCCCGAGTGGTGCCAGGTGATTaGTTTCCTGTTCCATCCAGC +
Preference number: 2 (lower is better)
Translates to: EELNYFVLVQAELTLASRVVPGD*FPVPSS
Trigger: GCTGGATGGAACAGGAAACCAATCACCTGGCACCAC...TCGGGAAGCCAGCGTGAGCTCAGCTTGGACCAAGACAAAATAATTTAGTTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000587995.5
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CCA 90 bp ACAGAGGCATTATATTTGACTTCTGTCGCCTCCTGCAGCACTGGTGGGAAGATGGCTGGGTCTGGACTCTaGAGTACAGGAAGAACTAAA +
Preference number: 2 (lower is better)
Translates to: TEALYLTSVASCSTGGKMAGSGL*STGRTK
Trigger: TTTAGTTCTTCCTGTACTCCAGAGTCCAGACCCAGC...CATCTTCCCACCAGTGCTGCAGGAGGCGACAGAAGTCAAATATAATGCCTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR TCA 90 bp ACGTTTCTAATTAGTAGCAAAGCTCACACAGAACCAAATACTATGCCCCTTTCCGGCAGGAGGCGGTTCTaGTGCTTCTGCCTTGCTTCA +
Preference number: 2 (lower is better)
Translates to: TFLISSKAHTEPNTMPLSGRRRF*CFCLAS
Trigger: TGAAGCAAGGCAGAAGCATCAGAACCGCCTCCTGCC...GGAAAGGGGCATAGTATTTGGTTCTGTGTGAGCTTTGCTACTAATTAGAAACGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585732.1
ENST00000647100.1
3UTR-3UTR GCA 90 bp GAAGGATCACCTTGCCAAAACACAGGTCAGGCTGGGTGGTGTCACCGCAGGAGTAAAGAGCACAACCACTaGTCTTTTTCACTATTTTAC +
Preference number: 2 (lower is better)
Translates to: EGSPCQNTGQAGWCHRRSKEHNH*SFSLFY
Trigger: GTAAAATAGTGAAAAAGAGCAGTGGTTGTGCTCTTT...ACTCCTGCGGTGACACCACCCAGCCTGACCTGTGTTTTGGCAAGGTGATCCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR GCA 90 bp TCCATGCAGCAATTGGATGTCTCAGCCTATTGGCTTTTCATAGATGCAAACTTTCTGGTGGGAAGATGCTaGAGTCACAGGTGGGGTCTG +
Preference number: 2 (lower is better)
Translates to: SMQQLDVSAYWLFIDANFLVGRC*SHRWGL
Trigger: CAGACCCCACCTGTGACTGCAGCATCTTCCCACCAG...AAAGTTTGCATCTATGAAAAGCCAATAGGCTGAGACATCCAATTGCTGCATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CCA 90 bp ACAGAGGCATTATATTTGACTTCTGTCGCCTCCTGCAGCACTGGTGGGAAGATGTTTTTGGGATGGCTCTaGAAGGATCACCTTGCCAAA +
Preference number: 2 (lower is better)
Translates to: TEALYLTSVASCSTGGKMFLGWL*KDHLAK
Trigger: TTTGGCAAGGTGATCCTTCCAGAGCCATCCCAAAAA...CATCTTCCCACCAGTGCTGCAGGAGGCGACAGAAGTCAAATATAATGCCTCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CCA 90 bp GTAAACCTTAGCTGTTCTAGCATTATTCTGCCACTTAAGCTGTCTTCGAGCTGCGTGGTGCCAGGTGATTaGTTTCCTGTTCCATCCAGC +
Preference number: 2 (lower is better)
Translates to: VNLSCSSIILPLKLSSSCVVPGD*FPVPSS
Trigger: GCTGGATGGAACAGGAAACCAATCACCTGGCACCAC...GCAGCTCGAAGACAGCTTAAGTGGCAGAATAATGCTAGAACAGCTAAGGTTTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382722.10
ENST00000537784.5
ENST00000645018.2
ENST00000646946.1
3UTR-3UTR CCA 90 bp AGCTGTTCTAGCATTATTCTGCCACTTAAGCTGTCTTCGAGCTGCAGTGTCTTCCCTCATCTCTGCATTTaGCCTCATTCTGCTGCTGCT +
Preference number: 2 (lower is better)
Translates to: SCSSIILPLKLSSSCSVFPHLCI*PHSAAA
Trigger: AGCAGCAGCAGAATGAGGCCAAATGCAGAGATGAGG...GAAGACACTGCAGCTCGAAGACAGCTTAAGTGGCAGAATAATGCTAGAACAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382722.10
ENST00000537784.5
ENST00000645018.2
ENST00000646946.1
3UTR CAA 90 bp CAGAGACCACTCCGACAGAAAGGGTCAGAAACAACTGACCCTTTCTaGGCTGGGTCTGGACTCTGGAGTACAGGAAGAACTAAATTATTT +
Preference number: 2 (lower is better)
Translates to: QRPLRQKGSETTDPF*AGSGLWSTGRTKLF
Trigger: AAATAATTTAGTTCTTCCTGTACTCCAGAGTCCAGACCCAGCCAAGAAAGGGTCAGTTGTTTCTGACCCTTTCTGTCGGAGTGGTCTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000587995.5
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR GCA 90 bp GCTGGGTCTGGACTCTGGAGTACAGGAAGAACTAAATTATTTTGTCTTGGTCCACATTTGGCCTCATTCTaGTGCTGCTTCTCAGTACCC +
Preference number: 2 (lower is better)
Translates to: AGSGLWSTGRTKLFCLGPHLASF*CCFSVP
Trigger: GGGTACTGAGAAGCAGCAGCAGAATGAGGCCAAATG...TGGACCAAGACAAAATAATTTAGTTCTTCCTGTACTCCAGAGTCCAGACCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000587995.5
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CCA 90 bp AGCATCTTGAAAGTGGTGCCAGGTGATTGGTTTCCTGTTCCATCCAGCATTCTCTTTTTGGGATGGCTCTaGAAGGATCACCTTGCCAAA +
Preference number: 2 (lower is better)
Translates to: SILKVVPGDWFPVPSSILFLGWL*KDHLAK
Trigger: TTTGGCAAGGTGATCCTTCCAGAGCCATCCCAAAAA...GAGAATGCTGGATGGAACAGGAAACCAATCACCTGGCACCACTTTCAAGATGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000587995.5
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR TCA 90 bp ATCAATTTCCATGCAGCAATTGGATGTCTCAGCCTATTGGCTTTTCATAGATGCTGGTACCGGGCACCATaGAGCATCTTGAAAGTGGTG +
Preference number: 2 (lower is better)
Translates to: INFHAAIGCLSLLAFHRCWYRAP*SILKVV
Trigger: CACCACTTTCAAGATGCTTCATGGTGCCCGGTACCA...GCATCTATGAAAAGCCAATAGGCTGAGACATCCAATTGCTGCATGGAAATTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR TCA 90 bp TGGCATTTGGCCTACTCTAGAGGCAAGTTAGGGCTATTTGCTGGTAGGAAACTTTTTGAACTTGAACTTTaGAGTGTGGAGGCTGAGGGT +
Preference number: 2 (lower is better)
Translates to: WHLAYSRGKLGLFAGRKLFELEL*SVEAEG
Trigger: ACCCTCAGCCTCCACACTTCAAAGTTCAAGTTCAAA...AAGTTTCCTACCAGCAAATAGCCCTAACTTGCCTCTAGAGTAGGCCAAATGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000382722.10
ENST00000537784.5
ENST00000645018.2
ENST00000646946.1
3UTR-3UTR CCA 90 bp AGAAGTCCTTGGGTTCTACCAGAGACCACTCCGACAGAAAGGGTCAGAAACAACGATGTCTCAGCCTATTaGCTTTTCATAGATGCAAAC +
Preference number: 2 (lower is better)
Translates to: RSPWVLPETTPTERVRNNDVSAY*LFIDAN
Trigger: GTTTGCATCTATGAAAAGCCAATAGGCTGAGACATC...GTTGTTTCTGACCCTTTCTGTCGGAGTGGTCTCTGGTAGAACCCAAGGACTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CCA 90 bp AGAGGCATTATATTTGACTTCTGTCGCCTCCTGCAGCACTGGTGGGAAGATGCTGATGTCTCAGCCTATTaGCTTTTCATAGATGCAAAC +
Preference number: 2 (lower is better)
Translates to: RGIIFDFCRLLQHWWEDADVSAY*LFIDAN
Trigger: GTTTGCATCTATGAAAAGCCAATAGGCTGAGACATC...AGCATCTTCCCACCAGTGCTGCAGGAGGCGACAGAAGTCAAATATAATGCCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CCA 90 bp GTATATGCCAGGCAGTTTCAAGCATGTTACGTGAATACATCACATTCAATCTTCGAGCTTCCCTCCCAGTaGACCCTGCTTAGCAAGTTG +
Preference number: 2 (lower is better)
Translates to: VYARQFQACYVNTSHSIFELPSQ*TLLSKL
Trigger: CAACTTGCTAAGCAGGGTCCACTGGGAGGGAAGCTC...GAAGATTGAATGTGATGTATTCACGTAACATGCTTGAAACTGCCTGGCATATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382722.10
ENST00000537784.5
ENST00000645018.2
ENST00000646946.1
3UTR-3UTR CCA 90 bp GTAAACCTTAGCTGTTCTAGCATTATTCTGCCACTTAAGCTGTCTTCGAGCTGCCTGGGGTTTGTTAAATaGAAAGATTTGAGGCCGGCC +
Preference number: 2 (lower is better)
Translates to: VNLSCSSIILPLKLSSSCLGFVK*KDLRPA
Trigger: GGCCGGCCTCAAATCTTTCCATTTAACAAACCCCAG...GCAGCTCGAAGACAGCTTAAGTGGCAGAATAATGCTAGAACAGCTAAGGTTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382722.10
ENST00000537784.5
ENST00000645018.2
ENST00000646946.1
3UTR-3UTR CCA 90 bp GCTGGGTCTGGACTCTGGAGTACAGGAAGAACTAAATTATTTTGTCTTGGTCCATTTTTGGGATGGCTCTaGAAGGATCACCTTGCCAAA +
Preference number: 2 (lower is better)
Translates to: AGSGLWSTGRTKLFCLGPFLGWL*KDHLAK
Trigger: TTTGGCAAGGTGATCCTTCCAGAGCCATCCCAAAAA...TGGACCAAGACAAAATAATTTAGTTCTTCCTGTACTCCAGAGTCCAGACCCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000587995.5
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CCA 90 bp ATCAATTTCCATGCAGCAATTGGATGTCTCAGCCTATTGGCTTTTCATAGATGCGTACCCAGAAGTCCTTaGGTTCTACCAGAGACCACT +
Preference number: 2 (lower is better)
Translates to: INFHAAIGCLSLLAFHRCVPRSP*VLPETT
Trigger: AGTGGTCTCTGGTAGAACCCAAGGACTTCTGGGTAC...GCATCTATGAAAAGCCAATAGGCTGAGACATCCAATTGCTGCATGGAAATTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CCA 90 bp ATCAATTTCCATGCAGCAATTGGATGTCTCAGCCTATTGGCTTTTCATAGATGCGAGCTTCCGGTGGTCTaGGTCAATATCTGTGATGCA +
Preference number: 2 (lower is better)
Translates to: INFHAAIGCLSLLAFHRCELPVV*VNICDA
Trigger: TGCATCACAGATATTGACCCAGACCACCGGAAGCTC...GCATCTATGAAAAGCCAATAGGCTGAGACATCCAATTGCTGCATGGAAATTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
3UTR-3UTR TCA 90 bp TCAATCTTCATACACTCTTCCGGTAATTTGGAGGCAATTTTCAACTCTGCTGCAGAAGTATGCTCATGTTaGGACCTAGGGCAGATGGTA +
Preference number: 2 (lower is better)
Translates to: SIFIHSSGNLEAIFNSAAEVCSC*DLGQMV
Trigger: TACCATCTGCCCTAGGTCTCAACATGAGCATACTTC...TGCAGCAGAGTTGAAAATTGCCTCCAAATTACCGGAAGAGTGTATGAAGATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382722.10
ENST00000537784.5
ENST00000645018.2
ENST00000646946.1
3UTR-3UTR CCA 90 bp TCCAACCCTAAGGATTTCACTCCAGGGACAGAGTCAAGTAGATTCTTTTGTAAAGCTGACTTTTTGGGATaGCTCTGGAAGGATCACCTT +
Preference number: 2 (lower is better)
Translates to: SNPKDFTPGTESSRFFCKADFLG*LWKDHL
Trigger: AAGGTGATCCTTCCAGAGCCATCCCAAAAAGTCAGC...TTTACAAAAGAATCTACTTGACTCTGTCCCTGGAGTGAAATCCTTAGGGTTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382722.10
ENST00000537784.5
ENST00000645018.2
ENST00000646946.1
3UTR-3UTR CCA 90 bp TCCATGCAGCAATTGGATGTCTCAGCCTATTGGCTTTTCATAGATGCAAACTTTGCTGGGTCTGGACTCTaGAGTACAGGAAGAACTAAA +
Preference number: 2 (lower is better)
Translates to: SMQQLDVSAYWLFIDANFAGSGL*STGRTK
Trigger: TTTAGTTCTTCCTGTACTCCAGAGTCCAGACCCAGC...AAAGTTTGCATCTATGAAAAGCCAATAGGCTGAGACATCCAATTGCTGCATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CCA 90 bp TCAATCTTCATACACTCTTCCGGTAATTTGGAGGCAATTTTCAACTCTGCTGCATTGAACTTTGAAGTGTaGAGGCTGAGGGTGATGGAG +
Preference number: 2 (lower is better)
Translates to: SIFIHSSGNLEAIFNSAALNFEV*RLRVME
Trigger: CTCCATCACCCTCAGCCTCCACACTTCAAAGTTCAA...TGCAGCAGAGTTGAAAATTGCCTCCAAATTACCGGAAGAGTGTATGAAGATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382722.10
ENST00000537784.5
ENST00000645018.2
ENST00000646946.1
3UTR-3UTR CCA 90 bp ATCAATTTCCATGCAGCAATTGGATGTCTCAGCCTATTGGCTTTTCATAGATGCTTGAACTTTGAAGTGTaGAGGCTGAGGGTGATGGAG +
Preference number: 2 (lower is better)
Translates to: INFHAAIGCLSLLAFHRCLNFEV*RLRVME
Trigger: CTCCATCACCCTCAGCCTCCACACTTCAAAGTTCAA...GCATCTATGAAAAGCCAATAGGCTGAGACATCCAATTGCTGCATGGAAATTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382722.10
ENST00000537784.5
ENST00000645018.2
ENST00000646946.1
3UTR-3UTR CCA 90 bp TTAGCTGTTCTAGCATTATTCTGCCACTTAAGCTGTCTTCGAGCTGCAGTGTCTTGTGTTTTACAGAGTTaGCATTTGGCCTACTCTAGA +
Preference number: 2 (lower is better)
Translates to: LAVLALFCHLSCLRAAVSCVLQS*HLAYSR
Trigger: TCTAGAGTAGGCCAAATGCCAACTCTGTAAAACACA...AGACACTGCAGCTCGAAGACAGCTTAAGTGGCAGAATAATGCTAGAACAGCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382722.10
ENST00000537784.5
ENST00000645018.2
ENST00000646946.1
3UTR-3UTR CCA 90 bp TCAATCTTCATACACTCTTCCGGTAATTTGGAGGCAATTTTCAACTCTGCTGCAGTCCATACCCATCACTaGGGTTTGTTAAATGGAAAG +
Preference number: 2 (lower is better)
Translates to: SIFIHSSGNLEAIFNSAAVHTHH*GLLNGK
Trigger: CTTTCCATTTAACAAACCCCAGTGATGGGTATGGAC...TGCAGCAGAGTTGAAAATTGCCTCCAAATTACCGGAAGAGTGTATGAAGATTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382722.10
ENST00000537784.5
ENST00000645018.2
ENST00000646946.1
3UTR-3UTR CCA 90 bp ATCAATTTCCATGCAGCAATTGGATGTCTCAGCCTATTGGCTTTTCATAGATGCGATGTCTCAGCCTATTaGCTTTTCATAGATGCAAAC +
Preference number: 2 (lower is better)
Translates to: INFHAAIGCLSLLAFHRCDVSAY*LFIDAN
Trigger: GTTTGCATCTATGAAAAGCCAATAGGCTGAGACATC...GCATCTATGAAAAGCCAATAGGCTGAGACATCCAATTGCTGCATGGAAATTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR GCA 90 bp TCCATGCAGCAATTGGATGTCTCAGCCTATTGGCTTTTCATAGATGCAAACTTTAAAGAGCACAACCACTaGTCTTTTTCACTATTTTAC +
Preference number: 2 (lower is better)
Translates to: SMQQLDVSAYWLFIDANFKEHNH*SFSLFY
Trigger: GTAAAATAGTGAAAAAGAGCAGTGGTTGTGCTCTTT...AAAGTTTGCATCTATGAAAAGCCAATAGGCTGAGACATCCAATTGCTGCATGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR GCA 90 bp TCAATCTTCATACACTCTTCCGGTAATTTGGAGGCAATTTTCAACTCTGCTGCAAATTTTCAACTCTGCTaGAGTTTCTATAACATGGGA +
Preference number: 2 (lower is better)
Translates to: SIFIHSSGNLEAIFNSAANFQLC*SFYNMG
Trigger: TCCCATGTTATAGAAACTGCAGCAGAGTTGAAAATT...TGCAGCAGAGTTGAAAATTGCCTCCAAATTACCGGAAGAGTGTATGAAGATTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382722.10
ENST00000537784.5
ENST00000645018.2
ENST00000646946.1
3UTR-3UTR CAA 90 bp GGTGTCCGAGGCGCCGCCGCAGTCCTGGGCATTCTCCTCTGGATGGAAGGCGTGGCCACCAGCCCAGGATaGAGAGGAGCGTTGGCCTGG +
Preference number: 3 (lower is better)
Translates to: GVRGAAAVLGILLWMEGVATSPG*RGALAW
Trigger: CCAGGCCAACGCTCCTCTCAATCCTGGGCTGGTGGC...CACGCCTTCCATCCAGAGGAGAATGCCCAGGACTGCGGCGGCGCCTCGGACACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CAA 90 bp GCAGGGCCCGCACTCCACGATCCCGTTGGCCTCCCGGATGGCCGGCTGGTACACTCTGCCCAGCGGAGGTaGAAGACGAAGCTGCCAGCA +
Preference number: 3 (lower is better)
Translates to: AGPALHDPVGLPDGRLVHSAQRR*KTKLPA
Trigger: TGCTGGCAGCTTCGTCTTCAACCTCCGCTGGGCAGA...GTGTACCAGCCGGCCATCCGGGAGGCCAACGGGATCGTGGAGTGCGGGCCCTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
3UTR CCA 72 bp CACTCCACGATCCCGTTGGCCTCCCGGATGGCCGGCTaGTACACGAACACGGGGTACTCCGTGTCGCAGGGC +
Preference number: 3 (lower is better)
Translates to: HSTIPLASRMAG*YTNTGYSVSQG
Trigger: GCCCTGCGACACGGAGTACCCCGTGTTCGTGTACCAGCCGGCCATCCGGGAGGCCAACGGGATCGTGGAGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000537923.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
ENST00000647066.1
3UTR CCA 72 bp AGGGCCCGCACTCCACGATCCCGTTGGCCTCCCGGATaGCCGGCTGGTACACGAACACGGGGTACTCCGTGT +
Preference number: 3 (lower is better)
Translates to: RARTPRSRWPPG*PAGTRTRGTPC
Trigger: ACACGGAGTACCCCGTGTTCGTGTACCAGCCGGCCATCCGGGAGGCCAACGGGATCGTGGAGTGCGGGCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000537923.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
ENST00000647066.1
3UTR TCA 72 bp AGCATTCTCCGGAGCCAGGGGCCACCAGCCCAGGATTaGGAGGAGCGTTGGCCTGGGGGCGACCCAACTGCA +
Preference number: 3 (lower is better)
Translates to: SILRSQGPPAQD*EERWPGGDPTA
Trigger: TGCAGTTGGGTCGCCCCCAGGCCAACGCTCCTCTCAATCCTGGGCTGGTGGCCCCTGGCTCCGGAGAATGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000587995.5
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR CCA 72 bp ATACCTTCTGGCAGGGCCCGCACTCCACGATCCCGTTaGCCTCCCGGATGGCCGGCTGGTACACGAACACGG +
Preference number: 3 (lower is better)
Translates to: IPSGRARTPRSR*PPGWPAGTRTR
Trigger: CCGTGTTCGTGTACCAGCCGGCCATCCGGGAGGCCAACGGGATCGTGGAGTGCGGGCCCTGCCAGAAGGTAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000537923.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
ENST00000647066.1
3UTR CCA 72 bp GGCATTCTCCTCTGGATGGAAGGCGTGGCAGGAGTCTaGTCGCCGGCGGAGCTTCTGGGAGCGCATCCGGTC +
Preference number: 3 (lower is better)
Translates to: GILLWMEGVAGV*SPAELLGAHPV
Trigger: GACCGGATGCGCTCCCAGAAGCTCCGCCGGCGACCAGACTCCTGCCACGCCTTCCATCCAGAGGAGAATGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CAA 90 bp GCAGGAGTAGGGGCGGCGAGGCTGAGGTGTCCGAGGCGCCGCCGCAGTCCTGGGGTCAGTGCTGACTTTTaGGGATGGCTCTGGAAGGAT +
Preference number: 3 (lower is better)
Translates to: AGVGAARLRCPRRRRSPGVSADF*GWLWKD
Trigger: ATCCTTCCAGAGCCATCCCAAAAAGTCAGCACTGAC...CCCAGGACTGCGGCGGCGCCTCGGACACCTCAGCCTCGCCGCCCCTACTCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CAA 90 bp GCAGGGCCCGCACTCCACGATCCCGTTGGCCTCCCGGATGGCCGGCTGGTACACGCCTCATCTCTGCATTaGGCCTCATTCTGCTGCTGC +
Preference number: 3 (lower is better)
Translates to: AGPALHDPVGLPDGRLVHASSLH*ASFCCC
Trigger: GCAGCAGCAGAATGAGGCCAAATGCAGAGATGAGGC...GTGTACCAGCCGGCCATCCGGGAGGCCAACGGGATCGTGGAGTGCGGGCCCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR TCA 72 bp AGGCCTGGCGGTACCACAGCGGGAAGCGGTCCAGGGTaGACACGCTGGCCTCGTCCTCAGGTGTCAGGAACT +
Preference number: 3 (lower is better)
Translates to: RPGGTTAGSGPG*TRWPRPQVSGT
Trigger: AGTTCCTGACACCTGAGGACGAGGCCAGCGTGTTCACCCTGGACCGCTTCCCGCTGTGGTACCGCCAGGCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
3UTR TCA 72 bp GCGGAGGTTGAAGACGAAGCTGCCAGCAGGATGCTCTaGGGCCTGGCGGTACCACAGCGGGAAGCGGTCCAG +
Preference number: 3 (lower is better)
Translates to: AEVEDEAASRML*GLAVPQREAVQ
Trigger: CTGGACCGCTTCCCGCTGTGGTACCGCCAGGCCTCAGAGCATCCTGCTGGCAGCTTCGTCTTCAACCTCCGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
3UTR-3UTR CAA 90 bp GCAGGAGTAGGGGCGGCGAGGCTGAGGTGTCCGAGGCGCCGCCGCAGTCCTGGGAGAAGTATGCTCATGTaGAGACCTAGGGCAGATGGT +
Preference number: 3 (lower is better)
Translates to: AGVGAARLRCPRRRRSPGRSMLM*RPRADG
Trigger: ACCATCTGCCCTAGGTCTCAACATGAGCATACTTCT...CCCAGGACTGCGGCGGCGCCTCGGACACCTCAGCCTCGCCGCCCCTACTCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR CCA 72 bp CGGTCACCGCCACAGCTGTGCTTGCCGTCACCACCATaGGTTCACCCGCACTTTCTGGTCCTTCTGCCCAGC +
Preference number: 3 (lower is better)
Translates to: RSPPQLCLPSPP*VHPHFLVLLPS
Trigger: GCTGGGCAGAAGGACCAGAAAGTGCGGGTGAACCCATGGTGGTGACGGCAAGCACAGCTGTGGCGGTGACCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
3UTR-3UTR CAA 90 bp GAAGGATCACCTTGCCAAAACACAGGTCAGGCTGGGTGGTGTCACCGCAGGAGTCACTCCACGATCCCGTaGGCCTCCCGGATGGCCGGC +
Preference number: 3 (lower is better)
Translates to: EGSPCQNTGQAGWCHRRSHSTIP*ASRMAG
Trigger: GCCGGCCATCCGGGAGGCCAACGGGATCGTGGAGTG...ACTCCTGCGGTGACACCACCCAGCCTGACCTGTGTTTTGGCAAGGTGATCCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CAA 90 bp GTGGGAGTGATGGAAGACACTTTTGGCCTCGGCCCCTCTGTCGTACCAGGAGCCGACTCCTCGGACATGTaGAGGGCCAGCGCTGTCCAG +
Preference number: 3 (lower is better)
Translates to: VGVMEDTFGLGPSVVPGADSSDM*RASAVQ
Trigger: CTGGACAGCGCTGGCCCTCAACATGTCCGAGGAGTC...GGCTCCTGGTACGACAGAGGGGCCGAGGCCAAAAGTGTCTTCCATCACTCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
3UTR-3UTR CAA 90 bp ACGGGGTACTCCGTGTCGCAGGGCTGCAGCGGGTCCTGCTTCTTGTGTTTGTGGGCAATGGCTGTCCTCTaGTCCACGGTCACCGCCACA +
Preference number: 3 (lower is better)
Translates to: TGYSVSQGCSGSCFLCLWAMAVL*STVTAT
Trigger: TGTGGCGGTGACCGTGGACAAGAGGACAGCCATTGC...CCACAAACACAAGAAGCAGGACCCGCTGCAGCCCTGCGACACGGAGTACCCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
3UTR-3UTR CAA 90 bp AGTAGGGGCGGCGAGGCTGAGGTGTCCGAGGCGCCGCCGCAGTCCTGGGCATTCACAGAGGCATTATATTaGACTTCTGTCGCCTCCTGC +
Preference number: 3 (lower is better)
Translates to: SRGGEAEVSEAPPQSWAFTEALY*TSVASC
Trigger: GCAGGAGGCGACAGAAGTCAAATATAATGCCTCTGT...GAATGCCCAGGACTGCGGCGGCGCCTCGGACACCTCAGCCTCGCCGCCCCTACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR GCA 72 bp CCACGAACAAGCTGCTTCTCAGGAGGCCAGCCCGGGTaGCCAGGAAGGCCATGTCCACCACGTGTTCAGACT +
Preference number: 3 (lower is better)
Translates to: PRTSCFSGGQPG*PGRPCPPRVQT
Trigger: AGTCTGAACACGTGGTGGACATGGCCTTCCTGGGCACCCGGGCTGGCCTCCTGAGAAGCAGCTTGTTCGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
3UTR-3UTR CAA 90 bp CCTGGGCATTCTCCTCTGGATGGAAGGCGTGGCAGGAGTCTGGTCGCCGGCGGAAGTACCCAGAAGTCCTaGGGTTCTACCAGAGACCAC +
Preference number: 3 (lower is better)
Translates to: PGHSPLDGRRGRSLVAGGSTQKS*GSTRDH
Trigger: GTGGTCTCTGGTAGAACCCAAGGACTTCTGGGTACT...TCCGCCGGCGACCAGACTCCTGCCACGCCTTCCATCCAGAGGAGAATGCCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CAA 90 bp TCTGGCAGGGCCCGCACTCCACGATCCCGTTGGCCTCCCGGATGGCCGGCTGGTGTACCTGTTTCCCTATaGATCATGGCTGTTCTCAGA +
Preference number: 3 (lower is better)
Translates to: SGRARTPRSRWPPGWPAGVPVSL*IMAVLR
Trigger: TCTGAGAACAGCCATGATCAATAGGGAAACAGGTAC...ACCAGCCGGCCATCCGGGAGGCCAACGGGATCGTGGAGTGCGGGCCCTGCCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
3UTR TCA 72 bp CACCCGCACTTTCTGGTCCTTCTGCCCAGCGGAGGTTaGAGACGAAGCTGCCAGCAGGATGCTCTGAGGCCT +
Preference number: 3 (lower is better)
Translates to: HPHFLVLLPSGG*RRSCQQDALRP
Trigger: AGGCCTCAGAGCATCCTGCTGGCAGCTTCGTCTTCAACCTCCGCTGGGCAGAAGGACCAGAAAGTGCGGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
3UTR GCA 72 bp TGTCCTCTTGTCCACGGTCACCGCCACAGCTGTGCTTaGCGTCACCACCATGGGTTCACCCGCACTTTCTGG +
Preference number: 3 (lower is better)
Translates to: CPLVHGHRHSCA*RHHHGFTRTFW
Trigger: CCAGAAAGTGCGGGTGAACCCATGGTGGTGACGGCAAGCACAGCTGTGGCGGTGACCGTGGACAAGAGGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
3UTR GCA 72 bp TGGCTGTCCTCTTGTCCACGGTCACCGCCACAGCTGTaGTTGCCGTCACCACCATGGGTTCACCCGCACTTT +
Preference number: 3 (lower is better)
Translates to: WLSSCPRSPPQL*LPSPPWVHPHF
Trigger: AAAGTGCGGGTGAACCCATGGTGGTGACGGCAAGCACAGCTGTGGCGGTGACCGTGGACAAGAGGACAGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
3UTR CCA 72 bp AAGGCGTGGCAGGAGTCTGGTCGCCGGCGGAGCTTCTaGGAGCGCATCCGGTCACATTTGACAGAGGCATTA +
Preference number: 3 (lower is better)
Translates to: KAWQESGRRRSF*ERIRSHLTEAL
Trigger: TAATGCCTCTGTCAAATGTGACCGGATGCGCTCCCAGAAGCTCCGCCGGCGACCAGACTCCTGCCACGCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CAA 90 bp TGGTACACGAACACGGGGTACTCCGTGTCGCAGGGCTGCAGCGGGTCCTGCTTCTCTGGAAGGATCACCTaGCCAAAACACAGGTCAGGC +
Preference number: 3 (lower is better)
Translates to: WYTNTGYSVSQGCSGSCFSGRIT*PKHRSG
Trigger: GCCTGACCTGTGTTTTGGCAAGGTGATCCTTCCAGA...GAAGCAGGACCCGCTGCAGCCCTGCGACACGGAGTACCCCGTGTTCGTGTACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CAA 90 bp GCATTATATTTGACTTCTGTCGCCTCCTGCAGCACTGGTGGGAAGATGCTGCAGCACTCCACGATCCCGTaGGCCTCCCGGATGGCCGGC +
Preference number: 3 (lower is better)
Translates to: ALYLTSVASCSTGGKMLQHSTIP*ASRMAG
Trigger: GCCGGCCATCCGGGAGGCCAACGGGATCGTGGAGTG...CTGCAGCATCTTCCCACCAGTGCTGCAGGAGGCGACAGAAGTCAAATATAATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR TCA 72 bp GGCTGCAGCGGGTCCTGCTTCTTGTGTTTGTGGGAGTaGTGGAAGACAAGCACCAGCTCCTGCAGCAGCCAC +
Preference number: 3 (lower is better)
Translates to: GCSGSCFLCLWE*WKTSTSSCSSH
Trigger: GTGGCTGCTGCAGGAGCTGGTGCTTGTCTTCCATCACTCCCACAAACACAAGAAGCAGGACCCGCTGCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537923.5
ENST00000647066.1
3UTR GCA 72 bp CGAAGCAGTCCAGATCACTGTCCTCGCAGCTCTGTGTaGACGGCCCATCCACAGTGCTGCACTGCAGCAATG +
Preference number: 3 (lower is better)
Translates to: RSSPDHCPRSSV*TAHPQCCTAAM
Trigger: CATTGCTGCAGTGCAGCACTGTGGATGGGCCGTGCACACAGAGCTGCGAGGACAGTGATCTGGACTGCTTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
3UTR-3UTR CAA 90 bp GGAGGAGGAGGTTACTGTTGGGAATCTGCTGCACCACAAATACCTTCTGGCAGGGCCACCAGCCCAGGATaGAGAGGAGCGTTGGCCTGG +
Preference number: 3 (lower is better)
Translates to: GGGGYCWESAAPQIPSGRATSPG*RGALAW
Trigger: CCAGGCCAACGCTCCTCTCAATCCTGGGCTGGTGGC...CCTGCCAGAAGGTATTTGTGGTGCAGCAGATTCCCAACAGTAACCTCCTCCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CAA 90 bp GGGTCAGAAACAACTGACCCTTTCTTGGCTGGGTCTGGACTCTGGAGTACAGGAGCCACCAGCCCAGGATaGAGAGGAGCGTTGGCCTGG +
Preference number: 3 (lower is better)
Translates to: GSETTDPFLAGSGLWSTGATSPG*RGALAW
Trigger: CCAGGCCAACGCTCCTCTCAATCCTGGGCTGGTGGC...TCCTGTACTCCAGAGTCCAGACCCAGCCAAGAAAGGGTCAGTTGTTTCTGACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000587995.5
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CAA 90 bp TCAAACAGCACCTCCCGGACCAGCTCCTCGTCACACTCCAGGTCTGGGTCCTTCTCTGGAAGGATCACCTaGCCAAAACACAGGTCAGGC +
Preference number: 3 (lower is better)
Translates to: SNSTSRTSSSSHSRSGSFSGRIT*PKHRSG
Trigger: GCCTGACCTGTGTTTTGGCAAGGTGATCCTTCCAGA...GAAGGACCCAGACCTGGAGTGTGACGAGGAGCTGGTCCGGGAGGTGCTGTTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
3UTR-3UTR CAA 90 bp GGTCTGTCACCAGGAGGAGGAGGTTACTGTTGGGAATCTGCTGCACCACAAATAGCCACCAGCCCAGGATaGAGAGGAGCGTTGGCCTGG +
Preference number: 3 (lower is better)
Translates to: GLSPGGGGYCWESAAPQIATSPG*RGALAW
Trigger: CCAGGCCAACGCTCCTCTCAATCCTGGGCTGGTGGC...TATTTGTGGTGCAGCAGATTCCCAACAGTAACCTCCTCCTCCTGGTGACAGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CAA 90 bp AAGGGTCAGAAACAACTGACCCTTTCTTGGCTGGGTCTGGACTCTGGAGTACAGGCCACCAGCCCAGGATaGAGAGGAGCGTTGGCCTGG +
Preference number: 3 (lower is better)
Translates to: KGQKQLTLSWLGLDSGVQATSPG*RGALAW
Trigger: CCAGGCCAACGCTCCTCTCAATCCTGGGCTGGTGGC...CTGTACTCCAGAGTCCAGACCCAGCCAAGAAAGGGTCAGTTGTTTCTGACCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000587995.5
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CAA 90 bp GTGGGAGTGATGGAAGACACTTTTGGCCTCGGCCCCTCTGTCGTACCAGGAGCCAGTACCCAGAAGTCCTaGGGTTCTACCAGAGACCAC +
Preference number: 3 (lower is better)
Translates to: VGVMEDTFGLGPSVVPGASTQKS*GSTRDH
Trigger: GTGGTCTCTGGTAGAACCCAAGGACTTCTGGGTACT...GGCTCCTGGTACGACAGAGGGGCCGAGGCCAAAAGTGTCTTCCATCACTCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CAA 90 bp ACGGGGTACTCCGTGTCGCAGGGCTGCAGCGGGTCCTGCTTCTTGTGTTTGTGGTTCAATAGCAGCAGTTaGGGGACATCACGTGTAGCC +
Preference number: 3 (lower is better)
Translates to: TGYSVSQGCSGSCFLCLWFNSSS*GTSRVA
Trigger: GGCTACACGTGATGTCCCCAAACTGCTGCTATTGAA...CCACAAACACAAGAAGCAGGACCCGCTGCAGCCCTGCGACACGGAGTACCCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR GCA 72 bp GTCACCAGGAGGAGGAGGTTACTGTTGGGAATCTGCTaGACCACAAATACCTTCTGGCAGGGCCCGCACTCC +
Preference number: 3 (lower is better)
Translates to: VTRRRRLLLGIC*TTNTFWQGPHS
Trigger: GGAGTGCGGGCCCTGCCAGAAGGTATTTGTGGTGCAGCAGATTCCCAACAGTAACCTCCTCCTCCTGGTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000537923.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
ENST00000647066.1
3UTR CCA 72 bp GATGCAGTAGATCCAGTCACCGGCCAGGGCCAGGTCTaGGTGAAGCAAGTCATGCAGGCCTTCTTCCACAGA +
Preference number: 3 (lower is better)
Translates to: DAVDPVTGQGQV*VKQVMQAFFHR
Trigger: TCTGTGGAAGAAGGCCTGCATGACTTGCTTCACCCAGACCTGGCCCTGGCCGGTGACTGGATCTACTGCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
3UTR-3UTR CAA 90 bp ATGGATTTCATTCCTTTCTCAGTCTTGACCATTCCCTTACCCAACCCCCACCCCCCTGGGATCCAGGTCTaGGGGTTTGGTCGGGGGAGG +
Preference number: 3 (lower is better)
Translates to: MDFIPFSVLTIPLPNPHPPGIQV*GFGRGR
Trigger: CCTCCCCCGACCAAACCCCAAGACCTGGATCCCAGG...GGGGTGGGGGTTGGGTAAGGGAATGGTCAAGACTGAGAAAGGAATGAAATCCAT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000382722.10
ENST00000537784.5
ENST00000645018.2
ENST00000646946.1
3UTR GCA 72 bp TCTGTCACCAGGAGGAGGAGGTTACTGTTGGGAATCTaGTGCACCACAAATACCTTCTGGCAGGGCCCGCAC +
Preference number: 3 (lower is better)
Translates to: SVTRRRRLLLGI*CTTNTFWQGPH
Trigger: GTGCGGGCCCTGCCAGAAGGTATTTGTGGTGCAGCAGATTCCCAACAGTAACCTCCTCCTCCTGGTGACAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000537923.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
ENST00000647066.1
3UTR CCA 72 bp TCCTTCCTGGTGAGGAAGCGGATCATGGCCTCTAGCTaGCTGAGCTTCCGGTGGTCTGGGTCAATATCTGTG +
Preference number: 3 (lower is better)
Translates to: SFLVRKRIMASS*LSFRWSGSISV
Trigger: CACAGATATTGACCCAGACCACCGGAAGCTCAGCCAGCTAGAGGCCATGATCCGCTTCCTCACCAGGAAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
3UTR-3UTR CAA 90 bp GCTCTGGAAGGATCACCTTGCCAAAACACAGGTCAGGCTGGGTGGTGTCACCGCGTCAGTGCTGACTTTTaGGGATGGCTCTGGAAGGAT +
Preference number: 3 (lower is better)
Translates to: ALEGSPCQNTGQAGWCHRVSADF*GWLWKD
Trigger: ATCCTTCCAGAGCCATCCCAAAAAGTCAGCACTGAC...GCGGTGACACCACCCAGCCTGACCTGTGTTTTGGCAAGGTGATCCTTCCAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR TCA 72 bp CGAGCAGCAGCTAGGAAGGTGAGTGGCCTCCCACCATaGGCCTCACTTTGGGGAATCTATGCTTTAGTTGGG +
Preference number: 3 (lower is better)
Translates to: RAAARKVSGLPP*ASLWGIYALVG
Trigger: CCCAACTAAAGCATAGATTCCCCAAAGTGAGGCTCATGGTGGGAGGCCACTCACCTTCCTAGCTGCTGCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CAA 90 bp TCCAAGCTGAGCTCACGCTGGCTTCCCGAAGAGGAGACAGGAAGGTTAGGTCAGGTCAGTGCTGACTTTTaGGGATGGCTCTGGAAGGAT +
Preference number: 3 (lower is better)
Translates to: SKLSSRWLPEEETGRLGQVSADF*GWLWKD
Trigger: ATCCTTCCAGAGCCATCCCAAAAAGTCAGCACTGAC...CTGACCTAACCTTCCTGTCTCCTCTTCGGGAAGCCAGCGTGAGCTCAGCTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000587995.5
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CAA 90 bp TGGAGACTGTTGTCTCCTGGGATCCAGGTCTTGGGGTTTGGTCGGGGGAGGAAGAGAAGTATGCTCATGTaGAGACCTAGGGCAGATGGT +
Preference number: 3 (lower is better)
Translates to: WRLLSPGIQVLGFGRGRKRSMLM*RPRADG
Trigger: ACCATCTGCCCTAGGTCTCAACATGAGCATACTTCT...CTTCCTCCCCCGACCAAACCCCAAGACCTGGATCCCAGGAGACAACAGTCTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382722.10
ENST00000537784.5
ENST00000645018.2
ENST00000646946.1
3UTR-3UTR CAA 90 bp AAAGTGGTGCCAGGTGATTGGTTTCCTGTTCCATCCAGCATTCTCCGGAGCCAGGCCTCATCTCTGCATTaGGCCTCATTCTGCTGCTGC +
Preference number: 3 (lower is better)
Translates to: KVVPGDWFPVPSSILRSQASSLH*ASFCCC
Trigger: GCAGCAGCAGAATGAGGCCAAATGCAGAGATGAGGC...CTGGCTCCGGAGAATGCTGGATGGAACAGGAAACCAATCACCTGGCACCACTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000587995.5
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR TCA 72 bp CCAGAGACCACTCCGACAGAAAGGGTCAGAAACAACTaGCCCTTTCTTGGCTGGGTCTGGACTCTGGAGTAC +
Preference number: 3 (lower is better)
Translates to: PETTPTERVRNN*PFLGWVWTLEY
Trigger: GTACTCCAGAGTCCAGACCCAGCCAAGAAAGGGTCAGTTGTTTCTGACCCTTTCTGTCGGAGTGGTCTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000587995.5
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CAA 90 bp AGAGACCACTCCGACAGAAAGGGTCAGAAACAACTGACCCTTTCTTGGCTGGGTGCCTCATCTCTGCATTaGGCCTCATTCTGCTGCTGC +
Preference number: 3 (lower is better)
Translates to: RDHSDRKGQKQLTLSWLGASSLH*ASFCCC
Trigger: GCAGCAGCAGAATGAGGCCAAATGCAGAGATGAGGC...ACCCAGCCAAGAAAGGGTCAGTTGTTTCTGACCCTTTCTGTCGGAGTGGTCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000587995.5
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CAA 90 bp ATCAATTTCCATGCAGCAATTGGATGTCTCAGCCTATTGGCTTTTCATAGATGCCACTCCACGATCCCGTaGGCCTCCCGGATGGCCGGC +
Preference number: 3 (lower is better)
Translates to: INFHAAIGCLSLLAFHRCHSTIP*ASRMAG
Trigger: GCCGGCCATCCGGGAGGCCAACGGGATCGTGGAGTG...GCATCTATGAAAAGCCAATAGGCTGAGACATCCAATTGCTGCATGGAAATTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR TCA 72 bp GACCCAACTGCAGTTAGCTGCATCCCATGTCAGTGCTaGCTTTTTGGGATGGCTCTGGAAGGATCACCTTGC +
Preference number: 3 (lower is better)
Translates to: DPTAVSCIPCQC*LFGMALEGSPC
Trigger: GCAAGGTGATCCTTCCAGAGCCATCCCAAAAAGTCAGCACTGACATGGGATGCAGCTAACTGCAGTTGGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000585385.5
ENST00000587995.5
ENST00000642253.1
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR TCA 72 bp CCTAGGGCAGATGGTACCGGGCACCATGAAGCATCTTaGAAGTGGTGCCAGGTGATTGGTTTCCTGTTCCAT +
Preference number: 3 (lower is better)
Translates to: PRADGTGHHEAS*KWCQVIGFLFH
Trigger: ATGGAACAGGAAACCAATCACCTGGCACCACTTTCAAGATGCTTCATGGTGCCCGGTACCATCTGCCCTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000587995.5
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR TCA 72 bp GGAGACAGGAAGGTTAGGTCAGAAGTATGCTCATGTTaGGACCTAGGGCAGATGGTACCGGGCACCATGAAG +
Preference number: 3 (lower is better)
Translates to: GDRKVRSEVCSC*DLGQMVPGTMK
Trigger: CTTCATGGTGCCCGGTACCATCTGCCCTAGGTCTCAACATGAGCATACTTCTGACCTAACCTTCCTGTCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000587995.5
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR CCA 72 bp GCATCCCATGTCAGTGCTGACTTTTTGGGATGGCTCTaGAAGGATCACCTTGCCAAAACACAGGTCAGGCTG +
Preference number: 3 (lower is better)
Translates to: ASHVSADFLGWL*KDHLAKTQVRL
Trigger: CAGCCTGACCTGTGTTTTGGCAAGGTGATCCTTCCAGAGCCATCCCAAAAAGTCAGCACTGACATGGGATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000585385.5
ENST00000587995.5
ENST00000588077.5
ENST00000642253.1
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000645225.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR CCA 72 bp ATTATATTTGACTTCTGTCGCCTCCTGCAGCACTGGTaGGAAGATGCTGCAGTCACAGGTGGGGTCTGTCAC +
Preference number: 3 (lower is better)
Translates to: IIFDFCRLLQHW*EDAAVTGGVCH
Trigger: GTGACAGACCCCACCTGTGACTGCAGCATCTTCCCACCAGTGCTGCAGGAGGCGACAGAAGTCAAATATAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CAA 90 bp TCCTTGGGTTCTACCAGAGACCACTCCGACAGAAAGGGTCAGAAACAACTGACCTCTGGAAGGATCACCTaGCCAAAACACAGGTCAGGC +
Preference number: 3 (lower is better)
Translates to: SLGSTRDHSDRKGQKQLTSGRIT*PKHRSG
Trigger: GCCTGACCTGTGTTTTGGCAAGGTGATCCTTCCAGA...GGTCAGTTGTTTCTGACCCTTTCTGTCGGAGTGGTCTCTGGTAGAACCCAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000587995.5
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CAA 90 bp CAAGCTGAGCTCACGCTGGCTTCCCGAAGAGGAGACAGGAAGGTTAGGTCAGAAAGAAGTATGCTCATGTaGAGACCTAGGGCAGATGGT +
Preference number: 3 (lower is better)
Translates to: QAELTLASRRGDRKVRSERSMLM*RPRADG
Trigger: ACCATCTGCCCTAGGTCTCAACATGAGCATACTTCT...TTCTGACCTAACCTTCCTGTCTCCTCTTCGGGAAGCCAGCGTGAGCTCAGCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000587995.5
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CAA 90 bp TACTGTTGGGAATCTGCTGCACCACAAATACCTTCTGGCAGGGCCCGCACTCCAAGAAGTATGCTCATGTaGAGACCTAGGGCAGATGGT +
Preference number: 3 (lower is better)
Translates to: YCWESAAPQIPSGRARTPRSMLM*RPRADG
Trigger: ACCATCTGCCCTAGGTCTCAACATGAGCATACTTCT...TGGAGTGCGGGCCCTGCCAGAAGGTATTTGTGGTGCAGCAGATTCCCAACAGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CAA 90 bp CAACTGCAGTTAGCTGCATCCCATGTCAGTGCTGACTTTTTGGGATGGCTCTGGAGTACCCAGAAGTCCTaGGGTTCTACCAGAGACCAC +
Preference number: 3 (lower is better)
Translates to: QLQLAASHVSADFLGWLWSTQKS*GSTRDH
Trigger: GTGGTCTCTGGTAGAACCCAAGGACTTCTGGGTACT...CCAGAGCCATCCCAAAAAGTCAGCACTGACATGGGATGCAGCTAACTGCAGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000587995.5
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CAA 90 bp ATGGATTTCATTCCTTTCTCAGTCTTGACCATTCCCTTACCCAACCCCCACCCCGCCTCATCTCTGCATTaGGCCTCATTCTGCTGCTGC +
Preference number: 3 (lower is better)
Translates to: MDFIPFSVLTIPLPNPHPASSLH*ASFCCC
Trigger: GCAGCAGCAGAATGAGGCCAAATGCAGAGATGAGGC...GGGGTGGGGGTTGGGTAAGGGAATGGTCAAGACTGAGAAAGGAATGAAATCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CAA 90 bp CTTCCCGAAGAGGAGACAGGAAGGTTAGGTCAGAAGTATGCTCATGTTGAGACCTCTGGAAGGATCACCTaGCCAAAACACAGGTCAGGC +
Preference number: 3 (lower is better)
Translates to: LPEEETGRLGQKYAHVETSGRIT*PKHRSG
Trigger: GCCTGACCTGTGTTTTGGCAAGGTGATCCTTCCAGA...GGTCTCAACATGAGCATACTTCTGACCTAACCTTCCTGTCTCCTCTTCGGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000587995.5
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CAA 90 bp CACCAGGAGGAGGAGGTTACTGTTGGGAATCTGCTGCACCACAAATACCTTCTGGTCAGTGCTGACTTTTaGGGATGGCTCTGGAAGGAT +
Preference number: 3 (lower is better)
Translates to: HQEEEVTVGNLLHHKYLLVSADF*GWLWKD
Trigger: ATCCTTCCAGAGCCATCCCAAAAAGTCAGCACTGAC...CAGAAGGTATTTGTGGTGCAGCAGATTCCCAACAGTAACCTCCTCCTCCTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CAA 90 bp ACCCAGAAGTCCTTGGGTTCTACCAGAGACCACTCCGACAGAAAGGGTCAGAAAGTCAGTGCTGACTTTTaGGGATGGCTCTGGAAGGAT +
Preference number: 3 (lower is better)
Translates to: TQKSLGSTRDHSDRKGQKVSADF*GWLWKD
Trigger: ATCCTTCCAGAGCCATCCCAAAAAGTCAGCACTGAC...TTTCTGACCCTTTCTGTCGGAGTGGTCTCTGGTAGAACCCAAGGACTTCTGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000587995.5
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CAA 90 bp CTCAGTACCCAGAAGTCCTTGGGTTCTACCAGAGACCACTCCGACAGAAAGGGTAGAAGTATGCTCATGTaGAGACCTAGGGCAGATGGT +
Preference number: 3 (lower is better)
Translates to: LSTQKSLGSTRDHSDRKGRSMLM*RPRADG
Trigger: ACCATCTGCCCTAGGTCTCAACATGAGCATACTTCT...ACCCTTTCTGTCGGAGTGGTCTCTGGTAGAACCCAAGGACTTCTGGGTACTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000587995.5
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CAA 90 bp CCACTCCGACAGAAAGGGTCAGAAACAACTGACCCTTTCTTGGCTGGGTCTGGAAGAAGTATGCTCATGTaGAGACCTAGGGCAGATGGT +
Preference number: 3 (lower is better)
Translates to: PLRQKGSETTDPFLAGSGRSMLM*RPRADG
Trigger: ACCATCTGCCCTAGGTCTCAACATGAGCATACTTCT...TCCAGACCCAGCCAAGAAAGGGTCAGTTGTTTCTGACCCTTTCTGTCGGAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000587995.5
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CAA 90 bp TGGCTTCCCGAAGAGGAGACAGGAAGGTTAGGTCAGAAGTATGCTCATGTTGAGAGTACCCAGAAGTCCTaGGGTTCTACCAGAGACCAC +
Preference number: 3 (lower is better)
Translates to: WLPEEETGRLGQKYAHVESTQKS*GSTRDH
Trigger: GTGGTCTCTGGTAGAACCCAAGGACTTCTGGGTACT...CTCAACATGAGCATACTTCTGACCTAACCTTCCTGTCTCCTCTTCGGGAAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000587995.5
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CAA 90 bp GTCACCAGGAGGAGGAGGTTACTGTTGGGAATCTGCTGCACCACAAATACCTTCGCTTTGCCCTTAATGTaGCTCTCACTGTGGAGACTG +
Preference number: 3 (lower is better)
Translates to: VTRRRRLLLGICCTTNTFALPLM*LSLWRL
Trigger: CAGTCTCCACAGTGAGAGCAACATTAAGGGCAAAGC...GAAGGTATTTGTGGTGCAGCAGATTCCCAACAGTAACCTCCTCCTCCTGGTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537784.5
ENST00000646946.1
3UTR-3UTR CAA 90 bp ACAGAGGCATTATATTTGACTTCTGTCGCCTCCTGCAGCACTGGTGGGAAGATGGTCAGTGCTGACTTTTaGGGATGGCTCTGGAAGGAT +
Preference number: 3 (lower is better)
Translates to: TEALYLTSVASCSTGGKMVSADF*GWLWKD
Trigger: ATCCTTCCAGAGCCATCCCAAAAAGTCAGCACTGAC...CATCTTCCCACCAGTGCTGCAGGAGGCGACAGAAGTCAAATATAATGCCTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CAA 90 bp AGAAGTCCTTGGGTTCTACCAGAGACCACTCCGACAGAAAGGGTCAGAAACAACGTCAGTGCTGACTTTTaGGGATGGCTCTGGAAGGAT +
Preference number: 3 (lower is better)
Translates to: RSPWVLPETTPTERVRNNVSADF*GWLWKD
Trigger: ATCCTTCCAGAGCCATCCCAAAAAGTCAGCACTGAC...GTTGTTTCTGACCCTTTCTGTCGGAGTGGTCTCTGGTAGAACCCAAGGACTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000587995.5
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CAA 90 bp ACCCAGAAGTCCTTGGGTTCTACCAGAGACCACTCCGACAGAAAGGGTCAGAAAAGAAGTATGCTCATGTaGAGACCTAGGGCAGATGGT +
Preference number: 3 (lower is better)
Translates to: TQKSLGSTRDHSDRKGQKRSMLM*RPRADG
Trigger: ACCATCTGCCCTAGGTCTCAACATGAGCATACTTCT...TTTCTGACCCTTTCTGTCGGAGTGGTCTCTGGTAGAACCCAAGGACTTCTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000587995.5
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CAA 90 bp TACTGTTGGGAATCTGCTGCACCACAAATACCTTCTGGCAGGGCCCGCACTCCAGGATGTCTCAGCCTATaGGCTTTTCATAGATGCAAA +
Preference number: 3 (lower is better)
Translates to: YCWESAAPQIPSGRARTPGCLSL*AFHRCK
Trigger: TTTGCATCTATGAAAAGCCAATAGGCTGAGACATCC...TGGAGTGCGGGCCCTGCCAGAAGGTATTTGTGGTGCAGCAGATTCCCAACAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CAA 90 bp ACACAGTCAAAACCTTTTCGAGCAGCAGCTAGGAAGGTGAGTGGCCTCCCACCAATTTCCATGCAGCAATaGGATGTCTCAGCCTATTGG +
Preference number: 3 (lower is better)
Translates to: TQSKPFRAAARKVSGLPPISMQQ*DVSAYW
Trigger: CCAATAGGCTGAGACATCCAATTGCTGCATGGAAAT...TGGTGGGAGGCCACTCACCTTCCTAGCTGCTGCTCGAAAAGGTTTTGACTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CAA 90 bp ATGGATTTCATTCCTTTCTCAGTCTTGACCATTCCCTTACCCAACCCCCACCCCAGAATGAACCCGTTGTaGTCGATGACGAAGCAGTCC +
Preference number: 3 (lower is better)
Translates to: MDFIPFSVLTIPLPNPHPRMNPL*SMTKQS
Trigger: GGACTGCTTCGTCATCGACAACAACGGGTTCATTCT...GGGGTGGGGGTTGGGTAAGGGAATGGTCAAGACTGAGAAAGGAATGAAATCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
3UTR-3UTR CAA 90 bp GAAGAACTAAATTATTTTGTCTTGGTCCAAGCTGAGCTCACGCTGGCTTCCCGATCTGGAAGGATCACCTaGCCAAAACACAGGTCAGGC +
Preference number: 3 (lower is better)
Translates to: EELNYFVLVQAELTLASRSGRIT*PKHRSG
Trigger: GCCTGACCTGTGTTTTGGCAAGGTGATCCTTCCAGA...TCGGGAAGCCAGCGTGAGCTCAGCTTGGACCAAGACAAAATAATTTAGTTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000587995.5
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CAA 90 bp AAGTCCTTGGGTTCTACCAGAGACCACTCCGACAGAAAGGGTCAGAAACAACTGAGAAGTATGCTCATGTaGAGACCTAGGGCAGATGGT +
Preference number: 3 (lower is better)
Translates to: KSLGSTRDHSDRKGQKQLRSMLM*RPRADG
Trigger: ACCATCTGCCCTAGGTCTCAACATGAGCATACTTCT...CAGTTGTTTCTGACCCTTTCTGTCGGAGTGGTCTCTGGTAGAACCCAAGGACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000587995.5
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CAA 90 bp GGTTCTACCAGAGACCACTCCGACAGAAAGGGTCAGAAACAACTGACCCTTTCTACCCTGCTTAGCAAGTaGGAATGTTCCCACAAGTTC +
Preference number: 3 (lower is better)
Translates to: GSTRDHSDRKGQKQLTLSTLLSK*ECSHKF
Trigger: GAACTTGTGGGAACATTCCAACTTGCTAAGCAGGGT...AGAAAGGGTCAGTTGTTTCTGACCCTTTCTGTCGGAGTGGTCTCTGGTAGAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382722.10
ENST00000537784.5
ENST00000645018.2
ENST00000646946.1
3UTR-3UTR CAA 90 bp AGAAGTCCTTGGGTTCTACCAGAGACCACTCCGACAGAAAGGGTCAGAAACAACATCAGAATGAACCCGTaGTTGTCGATGACGAAGCAG +
Preference number: 3 (lower is better)
Translates to: RSPWVLPETTPTERVRNNIRMNP*LSMTKQ
Trigger: CTGCTTCGTCATCGACAACAACGGGTTCATTCTGAT...GTTGTTTCTGACCCTTTCTGTCGGAGTGGTCTCTGGTAGAACCCAAGGACTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
3UTR-3UTR CAA 90 bp ATGGATTTCATTCCTTTCTCAGTCTTGACCATTCCCTTACCCAACCCCCACCCCACCATGAGCCTCACTTaGGGGAATCTATGCTTTAGT +
Preference number: 3 (lower is better)
Translates to: MDFIPFSVLTIPLPNPHPTMSLT*GNLCFS
Trigger: ACTAAAGCATAGATTCCCCAAAGTGAGGCTCATGGT...GGGGTGGGGGTTGGGTAAGGGAATGGTCAAGACTGAGAAAGGAATGAAATCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CAA 90 bp GGTTCTACCAGAGACCACTCCGACAGAAAGGGTCAGAAACAACTGACCCTTTCTATTCCTTTCTCAGTCTaGACCATTCCCTTACCCAAC +
Preference number: 3 (lower is better)
Translates to: GSTRDHSDRKGQKQLTLSIPFSV*TIPLPN
Trigger: GTTGGGTAAGGGAATGGTCAAGACTGAGAAAGGAAT...AGAAAGGGTCAGTTGTTTCTGACCCTTTCTGTCGGAGTGGTCTCTGGTAGAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CAA 90 bp AGAGGCATTATATTTGACTTCTGTCGCCTCCTGCAGCACTGGTGGGAAGATGCTATTTCCATGCAGCAATaGGATGTCTCAGCCTATTGG +
Preference number: 3 (lower is better)
Translates to: RGIIFDFCRLLQHWWEDAISMQQ*DVSAYW
Trigger: CCAATAGGCTGAGACATCCAATTGCTGCATGGAAAT...AGCATCTTCCCACCAGTGCTGCAGGAGGCGACAGAAGTCAAATATAATGCCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CAA 90 bp TCCATGCAGCAATTGGATGTCTCAGCCTATTGGCTTTTCATAGATGCAAACTTTGCCTCATCTCTGCATTaGGCCTCATTCTGCTGCTGC +
Preference number: 3 (lower is better)
Translates to: SMQQLDVSAYWLFIDANFASSLH*ASFCCC
Trigger: GCAGCAGCAGAATGAGGCCAAATGCAGAGATGAGGC...AAAGTTTGCATCTATGAAAAGCCAATAGGCTGAGACATCCAATTGCTGCATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CAA 90 bp TGGCTTCCCGAAGAGGAGACAGGAAGGTTAGGTCAGAAGTATGCTCATGTTGAGGGATGTCTCAGCCTATaGGCTTTTCATAGATGCAAA +
Preference number: 3 (lower is better)
Translates to: WLPEEETGRLGQKYAHVEGCLSL*AFHRCK
Trigger: TTTGCATCTATGAAAAGCCAATAGGCTGAGACATCC...CTCAACATGAGCATACTTCTGACCTAACCTTCCTGTCTCCTCTTCGGGAAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CAA 90 bp AGAGGCATTATATTTGACTTCTGTCGCCTCCTGCAGCACTGGTGGGAAGATGCTGGATGTCTCAGCCTATaGGCTTTTCATAGATGCAAA +
Preference number: 3 (lower is better)
Translates to: RGIIFDFCRLLQHWWEDAGCLSL*AFHRCK
Trigger: TTTGCATCTATGAAAAGCCAATAGGCTGAGACATCC...AGCATCTTCCCACCAGTGCTGCAGGAGGCGACAGAAGTCAAATATAATGCCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CAA 90 bp AGCCCTGCATGCTGTCCATACCCATCACTGGGGTTTGTTAAATGGAAAGATTTGACCCTGCTTAGCAAGTaGGAATGTTCCCACAAGTTC +
Preference number: 3 (lower is better)
Translates to: SPACCPYPSLGFVKWKDLTLLSK*ECSHKF
Trigger: GAACTTGTGGGAACATTCCAACTTGCTAAGCAGGGT...CAAATCTTTCCATTTAACAAACCCCAGTGATGGGTATGGACAGCATGCAGGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382722.10
ENST00000537784.5
ENST00000645018.2
ENST00000646946.1
3UTR TCA 72 bp ACAGGAAGAACTAAATTATTTTGTCTTGGTCCAAGCTaGGCTCACGCTGGCTTCCCGAAGAGGAGACAGGAA +
Preference number: 3 (lower is better)
Translates to: TGRTKLFCLGPS*AHAGFPKRRQE
Trigger: TTCCTGTCTCCTCTTCGGGAAGCCAGCGTGAGCTCAGCTTGGACCAAGACAAAATAATTTAGTTCTTCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000587995.5
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CAA 90 bp TCCATGCAGCAATTGGATGTCTCAGCCTATTGGCTTTTCATAGATGCAAACTTTAGTACCCAGAAGTCCTaGGGTTCTACCAGAGACCAC +
Preference number: 3 (lower is better)
Translates to: SMQQLDVSAYWLFIDANFSTQKS*GSTRDH
Trigger: GTGGTCTCTGGTAGAACCCAAGGACTTCTGGGTACT...AAAGTTTGCATCTATGAAAAGCCAATAGGCTGAGACATCCAATTGCTGCATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR GCA 72 bp CTTTGGGGAATCTATGCTTTAGTTGGGGCATATTCTTaGCTTAGCCTCATCTCTGCATTTGGCCTCATTCTG +
Preference number: 3 (lower is better)
Translates to: LWGIYALVGAYS*LSLISAFGLIL
Trigger: CAGAATGAGGCCAAATGCAGAGATGAGGCTAAGGCAAGAATATGCCCCAACTAAAGCATAGATTCCCCAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CAA 90 bp TCAATTTCCATGCAGCAATTGGATGTCTCAGCCTATTGGCTTTTCATAGATGCAGTCAGTGCTGACTTTTaGGGATGGCTCTGGAAGGAT +
Preference number: 3 (lower is better)
Translates to: SISMQQLDVSAYWLFIDAVSADF*GWLWKD
Trigger: ATCCTTCCAGAGCCATCCCAAAAAGTCAGCACTGAC...TGCATCTATGAAAAGCCAATAGGCTGAGACATCCAATTGCTGCATGGAAATTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CAA 90 bp TCAATTTCCATGCAGCAATTGGATGTCTCAGCCTATTGGCTTTTCATAGATGCATTCAATAGCAGCAGTTaGGGGACATCACGTGTAGCC +
Preference number: 3 (lower is better)
Translates to: SISMQQLDVSAYWLFIDAFNSSS*GTSRVA
Trigger: GGCTACACGTGATGTCCCCAAACTGCTGCTATTGAA...TGCATCTATGAAAAGCCAATAGGCTGAGACATCCAATTGCTGCATGGAAATTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR TCA 72 bp GGACTAATGATAGTACCCACTTTCAGGGGGCTGTTGTaGGGATGGAATGAGCTGAAACATGTTATTTGGTAC +
Preference number: 3 (lower is better)
Translates to: GLMIVPTFRGLL*GWNELKHVIWY
Trigger: GTACCAAATAACATGTTTCAGCTCATTCCATCCTCACAACAGCCCCCTGAAAGTGGGTACTATCATTAGTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000382722.10
ENST00000537784.5
ENST00000645018.2
ENST00000646946.1
3UTR TCA 72 bp AGTACCCACTTTCAGGGGGCTGTTGTGAGGATGGAATaGGCTGAAACATGTTATTTGGTACATGTAAACCTT +
Preference number: 3 (lower is better)
Translates to: STHFQGAVVRME*AETCYLVHVNL
Trigger: AAGGTTTACATGTACCAAATAACATGTTTCAGCTCATTCCATCCTCACAACAGCCCCCTGAAAGTGGGTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000382722.10
ENST00000537784.5
ENST00000645018.2
ENST00000646946.1
3UTR CCA 72 bp GAAACAACTGACCCTTTCTTGGCTGGGTCTGGACTCTaGAGTACAGGAAGAACTAAATTATTTTGTCTTGGT +
Preference number: 3 (lower is better)
Translates to: ETTDPFLAGSGL*STGRTKLFCLG
Trigger: ACCAAGACAAAATAATTTAGTTCTTCCTGTACTCCAGAGTCCAGACCCAGCCAAGAAAGGGTCAGTTGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000587995.5
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR-3UTR CAA 90 bp TCAATTTCCATGCAGCAATTGGATGTCTCAGCCTATTGGCTTTTCATAGATGCAATTTCCATGCAGCAATaGGATGTCTCAGCCTATTGG +
Preference number: 3 (lower is better)
Translates to: SISMQQLDVSAYWLFIDAISMQQ*DVSAYW
Trigger: CCAATAGGCTGAGACATCCAATTGCTGCATGGAAAT...TGCATCTATGAAAAGCCAATAGGCTGAGACATCCAATTGCTGCATGGAAATTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
3UTR CCA 72 bp TCAATTTCCATGCAGCAATTGGATGTCTCAGCCTATTaGCTTTTCATAGATGCAAACTTTCCTTTAGGGCTT +
Preference number: 3 (lower is better)
Translates to: SISMQQLDVSAY*LFIDANFPLGL
Trigger: AAGCCCTAAAGGAAAGTTTGCATCTATGAAAAGCCAATAGGCTGAGACATCCAATTGCTGCATGGAAATTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR GCA 90 bp TTCTGGCAGGGCCCGCACTCCACGATCCCGTTGGCCTCCCGGATGGCCGGCTGGACGGCCCATCCACAGTaGTGCACTGCCGCGTTGCCG +
Preference number: 4 (lower is better)
Translates to: FWQGPHSTIPLASRMAGWTAHPQ*CTAALP
Trigger: CGGCAACGCGGCAGTGCAGCACTGTGGATGGGCCGT...CCAGCCGGCCATCCGGGAGGCCAACGGGATCGTGGAGTGCGGGCCCTGCCAGAA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000537784.5
ENST00000537923.5
ENST00000585385.5
ENST00000642253.1
ENST00000646946.1
ENST00000647066.1
CDS-3UTR CCA 90 bp CTGGCAGGGCCCGCACTCCACGATCCCGTTGGCCTCCCGGATGGCCGGCTGGTAGCCACGGGCATTGGCTaGAGGGGAATCCAGCGGCTG +
Preference number: 4 (lower is better)
Translates to: LAGPALHDPVGLPDGRLVATGIG*RGIQRL
Trigger: CAGCCGCTGGATTCCCCTCCAGCCAATGCCCGTGGC...TACCAGCCGGCCATCCGGGAGGCCAACGGGATCGTGGAGTGCGGGCCCTGCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
CDS-3UTR CCA 90 bp GCAGGAGTAGGGGCGGCGAGGCTGAGGTGTCCGAGGCGCCGCCGCAGTCCTGGGCCCATGCTGAGCAGCTaGGTCAGGACAGCACCATCC +
Preference number: 4 (lower is better)
Translates to: AGVGAARLRCPRRRRSPGPMLSS*VRTAPS
Trigger: GGATGGTGCTGTCCTGACCCAGCTGCTCAGCATGGG...CCCAGGACTGCGGCGGCGCCTCGGACACCTCAGCCTCGCCGCCCCTACTCCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
CDS-3UTR CCA 90 bp GGCAGGGCCCGCACTCCACGATCCCGTTGGCCTCCCGGATGGCCGGCTGGTACACGCCGGCGGAGCTTCTaGGAGCGCATCCGGTCACAT +
Preference number: 4 (lower is better)
Translates to: GRARTPRSRWPPGWPAGTRRRSF*ERIRSH
Trigger: ATGTGACCGGATGCGCTCCCAGAAGCTCCGCCGGCG...TGTACCAGCCGGCCATCCGGGAGGCCAACGGGATCGTGGAGTGCGGGCCCTGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR GCA 90 bp CCCGCACTCCACGATCCCGTTGGCCTCCCGGATGGCCGGCTGGTACACGAACACGGAGGCCAGCCCGGGTaGCCAGGAAGGCCATGTCCA +
Preference number: 4 (lower is better)
Translates to: PALHDPVGLPDGRLVHEHGGQPG*PGRPCP
Trigger: TGGACATGGCCTTCCTGGGCACCCGGGCTGGCCTCC...GTGTTCGTGTACCAGCCGGCCATCCGGGAGGCCAACGGGATCGTGGAGTGCGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000646018.1
ENST00000646946.1
CDS-3UTR GCA 90 bp GCAGGGCCCGCACTCCACGATCCCGTTGGCCTCCCGGATGGCCGGCTGGTACACGCTGCACTGCCGCGTTaGCGCCCAGAATTTGCGCTG +
Preference number: 4 (lower is better)
Translates to: AGPALHDPVGLPDGRLVHAALPR*RPEFAL
Trigger: CAGCGCAAATTCTGGGCGGCAACGCGGCAGTGCAGC...GTGTACCAGCCGGCCATCCGGGAGGCCAACGGGATCGTGGAGTGCGGGCCCTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000537784.5
ENST00000537923.5
ENST00000585385.5
ENST00000642253.1
ENST00000646946.1
ENST00000647066.1
CDS-3UTR GCA 90 bp GGCAGGGCCCGCACTCCACGATCCCGTTGGCCTCCCGGATGGCCGGCTGGTACAGCTGCACTGCCGCGTTaGCGCCCAGAATTTGCGCTG +
Preference number: 4 (lower is better)
Translates to: GRARTPRSRWPPGWPAGTAALPR*RPEFAL
Trigger: CAGCGCAAATTCTGGGCGGCAACGCGGCAGTGCAGC...TGTACCAGCCGGCCATCCGGGAGGCCAACGGGATCGTGGAGTGCGGGCCCTGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000537784.5
ENST00000537923.5
ENST00000585385.5
ENST00000642253.1
ENST00000646946.1
ENST00000647066.1
CDS-3UTR GCA 90 bp TCTGGCAGGGCCCGCACTCCACGATCCCGTTGGCCTCCCGGATGGCCGGCTGGTCCTCGCAGCTCTGTGTaGACGGCCCATCCACAGTGC +
Preference number: 4 (lower is better)
Translates to: SGRARTPRSRWPPGWPAGPRSSV*TAHPQC
Trigger: GCACTGTGGATGGGCCGTGCACACAGAGCTGCGAGG...ACCAGCCGGCCATCCGGGAGGCCAACGGGATCGTGGAGTGCGGGCCCTGCCAGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000537923.5
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646946.1
ENST00000647066.1
CDS-3UTR GCA 90 bp TTCTGGCAGGGCCCGCACTCCACGATCCCGTTGGCCTCCCGGATGGCCGGCTGGCCTCGCAGCTCTGTGTaGACGGCCCATCCACAGTGC +
Preference number: 4 (lower is better)
Translates to: FWQGPHSTIPLASRMAGWPRSSV*TAHPQC
Trigger: GCACTGTGGATGGGCCGTGCACACAGAGCTGCGAGG...CCAGCCGGCCATCCGGGAGGCCAACGGGATCGTGGAGTGCGGGCCCTGCCAGAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000537923.5
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646946.1
ENST00000647066.1
CDS-3UTR GCA 90 bp TTCTGGCAGGGCCCGCACTCCACGATCCCGTTGGCCTCCCGGATGGCCGGCTGGTCCGTGTCGCAGGGCTaGAGCGGGTCCTGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: FWQGPHSTIPLASRMAGWSVSQG*SGSCFL
Trigger: CAAGAAGCAGGACCCGCTGCAGCCCTGCGACACGGA...CCAGCCGGCCATCCGGGAGGCCAACGGGATCGTGGAGTGCGGGCCCTGCCAGAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000537923.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
ENST00000647066.1
CDS-3UTR GCA 90 bp GCAGGGCCCGCACTCCACGATCCCGTTGGCCTCCCGGATGGCCGGCTGGTACACACAAGCACCAGCTCCTaGAGCAGCCACCTGGTCGCC +
Preference number: 4 (lower is better)
Translates to: AGPALHDPVGLPDGRLVHTSTSS*SSHLVA
Trigger: GGCGACCAGGTGGCTGCTGCAGGAGCTGGTGCTTGT...GTGTACCAGCCGGCCATCCGGGAGGCCAACGGGATCGTGGAGTGCGGGCCCTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537923.5
ENST00000647066.1
CDS-3UTR CCA 90 bp TGGCAGGGCCCGCACTCCACGATCCCGTTGGCCTCCCGGATGGCCGGCTGGTACGTGCCTTGGCGAGCCTaGGGTCTCCAGCCTCTCAGT +
Preference number: 4 (lower is better)
Translates to: WQGPHSTIPLASRMAGWYVPWRA*GLQPLS
Trigger: ACTGAGAGGCTGGAGACCCCAGGCTCGCCAAGGCAC...GTACCAGCCGGCCATCCGGGAGGCCAACGGGATCGTGGAGTGCGGGCCCTGCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
CDS-3UTR CCA 90 bp GGCAGGGCCCGCACTCCACGATCCCGTTGGCCTCCCGGATGGCCGGCTGGTACACCTGCAGCAGCCACCTaGTCGCCGTCAAGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: GRARTPRSRWPPGWPAGTPAAAT*SPSRRQ
Trigger: CTGCCTTCTTGACGGCGACCAGGTGGCTGCTGCAGG...TGTACCAGCCGGCCATCCGGGAGGCCAACGGGATCGTGGAGTGCGGGCCCTGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000537923.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
ENST00000647066.1
CDS-3UTR CCA 90 bp GCAGGGCCCGCACTCCACGATCCCGTTGGCCTCCCGGATGGCCGGCTGGTACACCGTTGGCCTCCCGGATaGCCGGCTGGTACACGAACA +
Preference number: 4 (lower is better)
Translates to: AGPALHDPVGLPDGRLVHRWPPG*PAGTRT
Trigger: TGTTCGTGTACCAGCCGGCCATCCGGGAGGCCAACG...GTGTACCAGCCGGCCATCCGGGAGGCCAACGGGATCGTGGAGTGCGGGCCCTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000537923.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
ENST00000647066.1
CDS-3UTR CCA 90 bp TGGCCTCCCGGATGGCCGGCTGGTACACGAACACGGGGTACTCCGTGTCGCAGGGGCGTGGCAGGAGTCTaGTCGCCGGCGGAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: WPPGWPAGTRTRGTPCRRGVAGV*SPAELL
Trigger: CAGAAGCTCCGCCGGCGACCAGACTCCTGCCACGCC...CCTGCGACACGGAGTACCCCGTGTTCGTGTACCAGCCGGCCATCCGGGAGGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR CCA 90 bp GCGTGGCAGGAGTCTGGTCGCCGGCGGAGCTTCTGGGAGCGCATCCGGTCACATGGCGTGGCAGGAGTCTaGTCGCCGGCGGAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: AWQESGRRRSFWERIRSHGVAGV*SPAELL
Trigger: CAGAAGCTCCGCCGGCGACCAGACTCCTGCCACGCC...ATGTGACCGGATGCGCTCCCAGAAGCTCCGCCGGCGACCAGACTCCTGCCACGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR TCA 90 bp GGCCCGCACTCCACGATCCCGTTGGCCTCCCGGATGGCCGGCTGGTACACGAACTCTCAGGGCCACATCTaGGCCCACCACACCCAGGAG +
Preference number: 4 (lower is better)
Translates to: GPHSTIPLASRMAGWYTNSQGHI*AHHTQE
Trigger: CTCCTGGGTGTGGTGGGCTCAGATGTGGCCCTGAGA...GTTCGTGTACCAGCCGGCCATCCGGGAGGCCAACGGGATCGTGGAGTGCGGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
CDS-3UTR GCA 90 bp TCTGGCAGGGCCCGCACTCCACGATCCCGTTGGCCTCCCGGATGGCCGGCTGGTCGCCACAGCTGTGCTTaGCGTCACCACCATGGGTTC +
Preference number: 4 (lower is better)
Translates to: SGRARTPRSRWPPGWPAGRHSCA*RHHHGF
Trigger: GAACCCATGGTGGTGACGGCAAGCACAGCTGTGGCG...ACCAGCCGGCCATCCGGGAGGCCAACGGGATCGTGGAGTGCGGGCCCTGCCAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000646018.1
ENST00000646946.1
CDS-3UTR GCA 90 bp GCGTGGCAGGAGTCTGGTCGCCGGCGGAGCTTCTGGGAGCGCATCCGGTCACATACGGCCCATCCACAGTaGTGCACTGCCGCGTTGCCG +
Preference number: 4 (lower is better)
Translates to: AWQESGRRRSFWERIRSHTAHPQ*CTAALP
Trigger: CGGCAACGCGGCAGTGCAGCACTGTGGATGGGCCGT...ATGTGACCGGATGCGCTCCCAGAAGCTCCGCCGGCGACCAGACTCCTGCCACGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000537784.5
ENST00000585385.5
ENST00000642253.1
ENST00000646946.1
CDS-3UTR GCA 90 bp TGGTACACGAACACGGGGTACTCCGTGTCGCAGGGCTGCAGCGGGTCCTGCTTCGTCGGGGGAGGAAGCTaGGGGGCCTTGGGACCCTGG +
Preference number: 4 (lower is better)
Translates to: WYTNTGYSVSQGCSGSCFVGGGS*GALGPW
Trigger: CCAGGGTCCCAAGGCCCCGCAGCTTCCTCCCCCGAC...GAAGCAGGACCCGCTGCAGCCCTGCGACACGGAGTACCCCGTGTTCGTGTACCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000537784.5
ENST00000646946.1
CDS-3UTR CCA 90 bp AGCAGGAGTAGGGGCGGCGAGGCTGAGGTGTCCGAGGCGCCGCCGCAGTCCTGGTTCACCCGCACTTTCTaGTCCTTCTGCCCAGCGGAG +
Preference number: 4 (lower is better)
Translates to: SRSRGGEAEVSEAPPQSWFTRTF*SFCPAE
Trigger: CTCCGCTGGGCAGAAGGACCAGAAAGTGCGGGTGAA...CCAGGACTGCGGCGGCGCCTCGGACACCTCAGCCTCGCCGCCCCTACTCCTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000646018.1
ENST00000646946.1
CDS-3UTR CCA 90 bp GCAGGAGTAGGGGCGGCGAGGCTGAGGTGTCCGAGGCGCCGCCGCAGTCCTGGGAATTCCAGCTTCATTTaGACGCCCGCGGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: AGVGAARLRCPRRRRSPGNSSFI*TPAAAA
Trigger: TGCTGCAGCCGCGGGCGTCCAAATGAAGCTGGAATT...CCCAGGACTGCGGCGGCGCCTCGGACACCTCAGCCTCGCCGCCCCTACTCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537784.5
ENST00000646946.1
CDS-3UTR CCA 90 bp GGCCTCCCGGATGGCCGGCTGGTACACGAACACGGGGTACTCCGTGTCGCAGGGCGTTGGCCTCCCGGATaGCCGGCTGGTACACGAACA +
Preference number: 4 (lower is better)
Translates to: GLPDGRLVHEHGVLRVAGRWPPG*PAGTRT
Trigger: TGTTCGTGTACCAGCCGGCCATCCGGGAGGCCAACG...CCCTGCGACACGGAGTACCCCGTGTTCGTGTACCAGCCGGCCATCCGGGAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000537923.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
ENST00000647066.1
CDS-3UTR CCA 90 bp GATGGCCGGCTGGTACACGAACACGGGGTACTCCGTGTCGCAGGGCTGCAGCGGACTCCACGATCCCGTTaGCCTCCCGGATGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: DGRLVHEHGVLRVAGLQRTPRSR*PPGWPA
Trigger: AGCCGGCCATCCGGGAGGCCAACGGGATCGTGGAGT...CCGCTGCAGCCCTGCGACACGGAGTACCCCGTGTTCGTGTACCAGCCGGCCATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000537923.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
ENST00000647066.1
CDS-3UTR CCA 90 bp CCCGTTGGCCTCCCGGATGGCCGGCTGGTACACGAACACGGGGTACTCCGTGTCACTCCACGATCCCGTTaGCCTCCCGGATGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: PVGLPDGRLVHEHGVLRVTPRSR*PPGWPA
Trigger: AGCCGGCCATCCGGGAGGCCAACGGGATCGTGGAGT...GACACGGAGTACCCCGTGTTCGTGTACCAGCCGGCCATCCGGGAGGCCAACGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000537923.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
ENST00000647066.1
CDS-3UTR CCA 90 bp GCAGGAGTAGGGGCGGCGAGGCTGAGGTGTCCGAGGCGCCGCCGCAGTCCTGGGCTCCTGCAGCACTGGTaGGAAGATGCTGCAGTCACA +
Preference number: 4 (lower is better)
Translates to: AGVGAARLRCPRRRRSPGLLQHW*EDAAVT
Trigger: TGTGACTGCAGCATCTTCCCACCAGTGCTGCAGGAG...CCCAGGACTGCGGCGGCGCCTCGGACACCTCAGCCTCGCCGCCCCTACTCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR CCA 90 bp CGTTGGCCTCCCGGATGGCCGGCTGGTACACGAACACGGGGTACTCCGTGTCGCCGCCGGCGGAGCTTCTaGGAGCGCATCCGGTCACAT +
Preference number: 4 (lower is better)
Translates to: RWPPGWPAGTRTRGTPCRRRRSF*ERIRSH
Trigger: ATGTGACCGGATGCGCTCCCAGAAGCTCCGCCGGCG...GCGACACGGAGTACCCCGTGTTCGTGTACCAGCCGGCCATCCGGGAGGCCAACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR CCA 90 bp CCGGATGGCCGGCTGGTACACGAACACGGGGTACTCCGTGTCGCAGGGCTGCAGGCGCCGCCGCAGTCCTaGGCATTCTCCTCTGGATGG +
Preference number: 4 (lower is better)
Translates to: PDGRLVHEHGVLRVAGLQAPPQS*AFSSGW
Trigger: CCATCCAGAGGAGAATGCCCAGGACTGCGGCGGCGC...CTGCAGCCCTGCGACACGGAGTACCCCGTGTTCGTGTACCAGCCGGCCATCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR CCA 90 bp GCAGGAGTAGGGGCGGCGAGGCTGAGGTGTCCGAGGCGCCGCCGCAGTCCTGGGAAGCTGAGCTCACGCTaGCTTCCCGAAGAGGAGACA +
Preference number: 4 (lower is better)
Translates to: AGVGAARLRCPRRRRSPGKLSSR*LPEEET
Trigger: TGTCTCCTCTTCGGGAAGCCAGCGTGAGCTCAGCTT...CCCAGGACTGCGGCGGCGCCTCGGACACCTCAGCCTCGCCGCCCCTACTCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR TCA 90 bp GCGTGGCAGGAGTCTGGTCGCCGGCGGAGCTTCTGGGAGCGCATCCGGTCACATTCTCAGGGCCACATCTaGGCCCACCACACCCAGGAG +
Preference number: 4 (lower is better)
Translates to: AWQESGRRRSFWERIRSHSQGHI*AHHTQE
Trigger: CTCCTGGGTGTGGTGGGCTCAGATGTGGCCCTGAGA...ATGTGACCGGATGCGCTCCCAGAAGCTCCGCCGGCGACCAGACTCCTGCCACGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
CDS-3UTR TCA 90 bp CGTTGGCCTCCCGGATGGCCGGCTGGTACACGAACACGGGGTACTCCGTGTCGCCTGCCCAGCGGAGGTTaGAGACGAAGCTGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: RWPPGWPAGTRTRGTPCRLPSGG*RRSCQQ
Trigger: CTGCTGGCAGCTTCGTCTTCAACCTCCGCTGGGCAG...GCGACACGGAGTACCCCGTGTTCGTGTACCAGCCGGCCATCCGGGAGGCCAACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000646018.1
ENST00000646946.1
CDS-3UTR TCA 90 bp AGTAGGGGCGGCGAGGCTGAGGTGTCCGAGGCGCCGCCGCAGTCCTGGGCATTCAGTGGCCTCCCACCATaGGCCTCACTTTGGGGAATC +
Preference number: 4 (lower is better)
Translates to: SRGGEAEVSEAPPQSWAFSGLPP*ASLWGI
Trigger: GATTCCCCAAAGTGAGGCTCATGGTGGGAGGCCACT...GAATGCCCAGGACTGCGGCGGCGCCTCGGACACCTCAGCCTCGCCGCCCCTACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR GCA 90 bp CCCGCACTCCACGATCCCGTTGGCCTCCCGGATGGCCGGCTGGTACACGAACACAGGGCCGAGGTCTTCTaGACAAAGGCCCAGGCCACG +
Preference number: 4 (lower is better)
Translates to: PALHDPVGLPDGRLVHEHRAEVF*TKAQAT
Trigger: CGTGGCCTGGGCCTTTGTGCAGAAGACCTCGGCCCT...GTGTTCGTGTACCAGCCGGCCATCCGGGAGGCCAACGGGATCGTGGAGTGCGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
CDS-3UTR GCA 90 bp GCAGGAGTAGGGGCGGCGAGGCTGAGGTGTCCGAGGCGCCGCCGCAGTCCTGGGTTGCAGAGGCTTCCTTaGTTGGCCTCTTGGAACTGC +
Preference number: 4 (lower is better)
Translates to: AGVGAARLRCPRRRRSPGLQRLP*LASWNC
Trigger: GCAGTTCCAAGAGGCCAAGCAAGGAAGCCTCTGCAA...CCCAGGACTGCGGCGGCGCCTCGGACACCTCAGCCTCGCCGCCCCTACTCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
CDS-3UTR GCA 90 bp GCGTGGCAGGAGTCTGGTCGCCGGCGGAGCTTCTGGGAGCGCATCCGGTCACATGCTGCACTGCCGCGTTaGCGCCCAGAATTTGCGCTG +
Preference number: 4 (lower is better)
Translates to: AWQESGRRRSFWERIRSHAALPR*RPEFAL
Trigger: CAGCGCAAATTCTGGGCGGCAACGCGGCAGTGCAGC...ATGTGACCGGATGCGCTCCCAGAAGCTCCGCCGGCGACCAGACTCCTGCCACGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000537784.5
ENST00000585385.5
ENST00000642253.1
ENST00000646946.1
CDS-3UTR GCA 90 bp TCCACGATCCCGTTGGCCTCCCGGATGGCCGGCTGGTACACGAACACGGGGTACACGGCCCATCCACAGTaGTGCACTGCCGCGTTGCCG +
Preference number: 4 (lower is better)
Translates to: STIPLASRMAGWYTNTGYTAHPQ*CTAALP
Trigger: CGGCAACGCGGCAGTGCAGCACTGTGGATGGGCCGT...GTACCCCGTGTTCGTGTACCAGCCGGCCATCCGGGAGGCCAACGGGATCGTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537784.5
ENST00000537923.5
ENST00000585385.5
ENST00000642253.1
ENST00000646946.1
ENST00000647066.1
CDS-3UTR GCA 90 bp CTGGCAGGGCCCGCACTCCACGATCCCGTTGGCCTCCCGGATGGCCGGCTGGTAGGCTGCAGCGGGTCCTaGTTCTTGTGTTTGTGGGAG +
Preference number: 4 (lower is better)
Translates to: LAGPALHDPVGLPDGRLVGCSGS*FLCLWE
Trigger: CTCCCACAAACACAAGAAGCAGGACCCGCTGCAGCC...TACCAGCCGGCCATCCGGGAGGCCAACGGGATCGTGGAGTGCGGGCCCTGCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000537923.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
ENST00000647066.1
CDS-3UTR GCA 90 bp GGCAGGGCCCGCACTCCACGATCCCGTTGGCCTCCCGGATGGCCGGCTGGTACAGGCTGCAGCGGGTCCTaGTTCTTGTGTTTGTGGGAG +
Preference number: 4 (lower is better)
Translates to: GRARTPRSRWPPGWPAGTGCSGS*FLCLWE
Trigger: CTCCCACAAACACAAGAAGCAGGACCCGCTGCAGCC...TGTACCAGCCGGCCATCCGGGAGGCCAACGGGATCGTGGAGTGCGGGCCCTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000537923.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
ENST00000647066.1
CDS-3UTR GCA 90 bp CTGGCAGGGCCCGCACTCCACGATCCCGTTGGCCTCCCGGATGGCCGGCTGGTACTGGTGGGAAGATGCTaGAGTCACAGGTGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: LAGPALHDPVGLPDGRLVLVGRC*SHRWGL
Trigger: CAGACCCCACCTGTGACTGCAGCATCTTCCCACCAG...TACCAGCCGGCCATCCGGGAGGCCAACGGGATCGTGGAGTGCGGGCCCTGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000537923.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
ENST00000647066.1
CDS-3UTR CCA 90 bp TTCTGGCAGGGCCCGCACTCCACGATCCCGTTGGCCTCCCGGATGGCCGGCTGGCAAGAAGGCAGAAATTaGGCTGACCAGGGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: FWQGPHSTIPLASRMAGWQEGRN*ADQGLG
Trigger: GCCCAGCCCCTGGTCAGCCCAATTTCTGCCTTCTTG...CCAGCCGGCCATCCGGGAGGCCAACGGGATCGTGGAGTGCGGGCCCTGCCAGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000537923.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
ENST00000647066.1
CDS-3UTR CCA 90 bp GCGTGGCAGGAGTCTGGTCGCCGGCGGAGCTTCTGGGAGCGCATCCGGTCACATCCTGCAGCAGCCACCTaGTCGCCGTCAAGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: AWQESGRRRSFWERIRSHPAAAT*SPSRRQ
Trigger: CTGCCTTCTTGACGGCGACCAGGTGGCTGCTGCAGG...ATGTGACCGGATGCGCTCCCAGAAGCTCCGCCGGCGACCAGACTCCTGCCACGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR CCA 90 bp CCCGCACTCCACGATCCCGTTGGCCTCCCGGATGGCCGGCTGGTACACGAACACCCTGCAGCAGCCACCTaGTCGCCGTCAAGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: PALHDPVGLPDGRLVHEHPAAAT*SPSRRQ
Trigger: CTGCCTTCTTGACGGCGACCAGGTGGCTGCTGCAGG...GTGTTCGTGTACCAGCCGGCCATCCGGGAGGCCAACGGGATCGTGGAGTGCGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000537923.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
ENST00000647066.1
CDS-3UTR CCA 90 bp TCCCGGATGGCCGGCTGGTACACGAACACGGGGTACTCCGTGTCGCAGGGCTGCTCCCGGATGGCCGGCTaGTACACGAACACGGGGTAC +
Preference number: 4 (lower is better)
Translates to: SRMAGWYTNTGYSVSQGCSRMAG*YTNTGY
Trigger: GTACCCCGTGTTCGTGTACCAGCCGGCCATCCGGGA...GCAGCCCTGCGACACGGAGTACCCCGTGTTCGTGTACCAGCCGGCCATCCGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000537923.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
ENST00000647066.1
CDS-3UTR CCA 90 bp CGTTGGCCTCCCGGATGGCCGGCTGGTACACGAACACGGGGTACTCCGTGTCGCCGTTGGCCTCCCGGATaGCCGGCTGGTACACGAACA +
Preference number: 4 (lower is better)
Translates to: RWPPGWPAGTRTRGTPCRRWPPG*PAGTRT
Trigger: TGTTCGTGTACCAGCCGGCCATCCGGGAGGCCAACG...GCGACACGGAGTACCCCGTGTTCGTGTACCAGCCGGCCATCCGGGAGGCCAACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000537923.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
ENST00000647066.1
CDS-3UTR CCA 90 bp TGGCAGGGCCCGCACTCCACGATCCCGTTGGCCTCCCGGATGGCCGGCTGGTACACCACAAATACCTTCTaGCAGGGCCCGCACTCCACG +
Preference number: 4 (lower is better)
Translates to: WQGPHSTIPLASRMAGWYTTNTF*QGPHST
Trigger: CGTGGAGTGCGGGCCCTGCCAGAAGGTATTTGTGGT...GTACCAGCCGGCCATCCGGGAGGCCAACGGGATCGTGGAGTGCGGGCCCTGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000537923.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
ENST00000647066.1
CDS-3UTR CCA 90 bp TCTGGCAGGGCCCGCACTCCACGATCCCGTTGGCCTCCCGGATGGCCGGCTGGTACCACAAATACCTTCTaGCAGGGCCCGCACTCCACG +
Preference number: 4 (lower is better)
Translates to: SGRARTPRSRWPPGWPAGTTNTF*QGPHST
Trigger: CGTGGAGTGCGGGCCCTGCCAGAAGGTATTTGTGGT...ACCAGCCGGCCATCCGGGAGGCCAACGGGATCGTGGAGTGCGGGCCCTGCCAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000537923.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
ENST00000647066.1
CDS-3UTR CCA 90 bp TGGGCATTCTCCTCTGGATGGAAGGCGTGGCAGGAGTCTGGTCGCCGGCGGAGCCGCCGGCGGAGCTTCTaGGAGCGCATCCGGTCACAT +
Preference number: 4 (lower is better)
Translates to: WAFSSGWKAWQESGRRRSRRRSF*ERIRSH
Trigger: ATGTGACCGGATGCGCTCCCAGAAGCTCCGCCGGCG...GCTCCGCCGGCGACCAGACTCCTGCCACGCCTTCCATCCAGAGGAGAATGCCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR CCA 90 bp GGTGTCCGAGGCGCCGCCGCAGTCCTGGGCATTCTCCTCTGGATGGAAGGCGTGTGTCACCGCAGGAGTTaGGGCAGTAGCCCCCAGGCA +
Preference number: 4 (lower is better)
Translates to: GVRGAAAVLGILLWMEGVCHRRS*GSSPQA
Trigger: TGCCTGGGGGCTACTGCCCCAACTCCTGCGGTGACA...CACGCCTTCCATCCAGAGGAGAATGCCCAGGACTGCGGCGGCGCCTCGGACACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR TCA 90 bp TCCACGATCCCGTTGGCCTCCCGGATGGCCGGCTGGTACACGAACACGGGGTACGCAGCTGCACGCTGCTaGTGGAGGTGTTCACCGGCA +
Preference number: 4 (lower is better)
Translates to: STIPLASRMAGWYTNTGYAAARC*WRCSPA
Trigger: TGCCGGTGAACACCTCCATCAGCAGCGTGCAGCTGC...GTACCCCGTGTTCGTGTACCAGCCGGCCATCCGGGAGGCCAACGGGATCGTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
CDS-3UTR TCA 90 bp TGGGCATTCTCCTCTGGATGGAAGGCGTGGCAGGAGTCTGGTCGCCGGCGGAGCCTGCCCAGCGGAGGTTaGAGACGAAGCTGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: WAFSSGWKAWQESGRRRSLPSGG*RRSCQQ
Trigger: CTGCTGGCAGCTTCGTCTTCAACCTCCGCTGGGCAG...GCTCCGCCGGCGACCAGACTCCTGCCACGCCTTCCATCCAGAGGAGAATGCCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000646018.1
ENST00000646946.1
CDS-3UTR TCA 90 bp CCCGCACTCCACGATCCCGTTGGCCTCCCGGATGGCCGGCTGGTACACGAACACCAGCAGCTAGGAAGGTaGGTGGCCTCCCACCATGAG +
Preference number: 4 (lower is better)
Translates to: PALHDPVGLPDGRLVHEHQQLGR*VASHHE
Trigger: CTCATGGTGGGAGGCCACTCACCTTCCTAGCTGCTG...GTGTTCGTGTACCAGCCGGCCATCCGGGAGGCCAACGGGATCGTGGAGTGCGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR GCA 90 bp GATCCCGTTGGCCTCCCGGATGGCCGGCTGGTACACGAACACGGGGTACTCCGTGGCCTTTGTCTTCCGTaGCTTGGCGAGCCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: DPVGLPDGRLVHEHGVLRGLCLP*LGEPGV
Trigger: GACCCCAGGCTCGCCAAGGCACGGAAGACAAAGGCC...ACGGAGTACCCCGTGTTCGTGTACCAGCCGGCCATCCGGGAGGCCAACGGGATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
CDS-3UTR GCA 90 bp GGCCTCCCGGATGGCCGGCTGGTACACGAACACGGGGTACTCCGTGTCGCAGGGCCAGCTCCACGAAGTTaGCCTTCTCGTCCCTCTCGT +
Preference number: 4 (lower is better)
Translates to: GLPDGRLVHEHGVLRVAGPAPRS*PSRPSR
Trigger: ACGAGAGGGACGAGAAGGGCAACTTCGTGGAGCTGG...CCCTGCGACACGGAGTACCCCGTGTTCGTGTACCAGCCGGCCATCCGGGAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
CDS-3UTR GCA 90 bp GAGCGTTGGCCTGGGGGCGACCCAACTGCAGTTAGCTGCATCCCATGTCAGTGCGGAGGCCAGCCCGGGTaGCCAGGAAGGCCATGTCCA +
Preference number: 4 (lower is better)
Translates to: ERWPGGDPTAVSCIPCQCGGQPG*PGRPCP
Trigger: TGGACATGGCCTTCCTGGGCACCCGGGCTGGCCTCC...GCACTGACATGGGATGCAGCTAACTGCAGTTGGGTCGCCCCCAGGCCAACGCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000587995.5
ENST00000644394.1
ENST00000645018.2
ENST00000646018.1
ENST00000646946.1
CDS-3UTR GCA 90 bp GCGTGGCAGGAGTCTGGTCGCCGGCGGAGCTTCTGGGAGCGCATCCGGTCACATCGCCACAGCTGTGCTTaGCGTCACCACCATGGGTTC +
Preference number: 4 (lower is better)
Translates to: AWQESGRRRSFWERIRSHRHSCA*RHHHGF
Trigger: GAACCCATGGTGGTGACGGCAAGCACAGCTGTGGCG...ATGTGACCGGATGCGCTCCCAGAAGCTCCGCCGGCGACCAGACTCCTGCCACGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000646018.1
ENST00000646946.1
CDS-3UTR GCA 90 bp GATCCCGTTGGCCTCCCGGATGGCCGGCTGGTACACGAACACGGGGTACTCCGTCCTCGCAGCTCTGTGTaGACGGCCCATCCACAGTGC +
Preference number: 4 (lower is better)
Translates to: DPVGLPDGRLVHEHGVLRPRSSV*TAHPQC
Trigger: GCACTGTGGATGGGCCGTGCACACAGAGCTGCGAGG...ACGGAGTACCCCGTGTTCGTGTACCAGCCGGCCATCCGGGAGGCCAACGGGATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000537923.5
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646946.1
ENST00000647066.1
CDS-3UTR GCA 90 bp AGGAGCGTTGGCCTGGGGGCGACCCAACTGCAGTTAGCTGCATCCCATGTCAGTGTCGGGGGAGGAAGCTaGGGGGCCTTGGGACCCTGG +
Preference number: 4 (lower is better)
Translates to: RSVGLGATQLQLAASHVSVGGGS*GALGPW
Trigger: CCAGGGTCCCAAGGCCCCGCAGCTTCCTCCCCCGAC...ACTGACATGGGATGCAGCTAACTGCAGTTGGGTCGCCCCCAGGCCAACGCTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000382722.10
ENST00000537784.5
ENST00000645018.2
ENST00000646946.1
CDS-3UTR GCA 90 bp GGGCATTCTCCTCTGGATGGAAGGCGTGGCAGGAGTCTGGTCGCCGGCGGAGCTCCGTGCACTCCAAGCTaGCAGAGTCCAGGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: GHSPLDGRRGRSLVAGGAPCTPS*QSPGWR
Trigger: CCTCCACCCTGGACTCTGGCAGCTTGGAGTGCACGG...AGCTCCGCCGGCGACCAGACTCCTGCCACGCCTTCCATCCAGAGGAGAATGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
CDS-3UTR CCA 90 bp AGGCTGAGGTGTCCGAGGCGCCGCCGCAGTCCTGGGCATTCTCCTCTGGATGGAGTGCCTTGGCGAGCCTaGGGTCTCCAGCCTCTCAGT +
Preference number: 4 (lower is better)
Translates to: RLRCPRRRRSPGHSPLDGVPWRA*GLQPLS
Trigger: ACTGAGAGGCTGGAGACCCCAGGCTCGCCAAGGCAC...TCCATCCAGAGGAGAATGCCCAGGACTGCGGCGGCGCCTCGGACACCTCAGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
CDS-3UTR CCA 90 bp GCGTGGCAGGAGTCTGGTCGCCGGCGGAGCTTCTGGGAGCGCATCCGGTCACATTTGTCTTCCGTGCCTTaGCGAGCCTGGGGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: AWQESGRRRSFWERIRSHLSSVP*RAWGLQ
Trigger: CTGGAGACCCCAGGCTCGCCAAGGCACGGAAGACAA...ATGTGACCGGATGCGCTCCCAGAAGCTCCGCCGGCGACCAGACTCCTGCCACGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
CDS-3UTR CCA 90 bp GATGGCCGGCTGGTACACGAACACGGGGTACTCCGTGTCGCAGGGCTGCAGCGGGCTTCTCTCAGGGCTTaGTCCACGACCCCCACACCT +
Preference number: 4 (lower is better)
Translates to: DGRLVHEHGVLRVAGLQRASLRA*STTPTP
Trigger: AGGTGTGGGGGTCGTGGACCAAGCCCTGAGAGAAGC...CCGCTGCAGCCCTGCGACACGGAGTACCCCGTGTTCGTGTACCAGCCGGCCATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
CDS-3UTR CCA 90 bp TCCCGGATGGCCGGCTGGTACACGAACACGGGGTACTCCGTGTCGCAGGGCTGCGGCCAGGGCCAGGTCTaGGTGAAGCAAGTCATGCAG +
Preference number: 4 (lower is better)
Translates to: SRMAGWYTNTGYSVSQGCGQGQV*VKQVMQ
Trigger: CTGCATGACTTGCTTCACCCAGACCTGGCCCTGGCC...GCAGCCCTGCGACACGGAGTACCCCGTGTTCGTGTACCAGCCGGCCATCCGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
CDS-3UTR CCA 90 bp GGGCATTCTCCTCTGGATGGAAGGCGTGGCAGGAGTCTGGTCGCCGGCGGAGCTGGATGCTCTGAGGCCTaGCGGTACCACAGCGGGAAG +
Preference number: 4 (lower is better)
Translates to: GHSPLDGRRGRSLVAGGAGCSEA*RYHSGK
Trigger: CTTCCCGCTGTGGTACCGCCAGGCCTCAGAGCATCC...AGCTCCGCCGGCGACCAGACTCCTGCCACGCCTTCCATCCAGAGGAGAATGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000646018.1
ENST00000646946.1
CDS-3UTR CCA 90 bp GGTGTCCGAGGCGCCGCCGCAGTCCTGGGCATTCTCCTCTGGATGGAAGGCGTGCCCATGCTGAGCAGCTaGGTCAGGACAGCACCATCC +
Preference number: 4 (lower is better)
Translates to: GVRGAAAVLGILLWMEGVPMLSS*VRTAPS
Trigger: GGATGGTGCTGTCCTGACCCAGCTGCTCAGCATGGG...CACGCCTTCCATCCAGAGGAGAATGCCCAGGACTGCGGCGGCGCCTCGGACACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
CDS-3UTR CCA 90 bp GGGCATTCTCCTCTGGATGGAAGGCGTGGCAGGAGTCTGGTCGCCGGCGGAGCTCCTGCAGCAGCCACCTaGTCGCCGTCAAGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: GHSPLDGRRGRSLVAGGAPAAAT*SPSRRQ
Trigger: CTGCCTTCTTGACGGCGACCAGGTGGCTGCTGCAGG...AGCTCCGCCGGCGACCAGACTCCTGCCACGCCTTCCATCCAGAGGAGAATGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR CCA 90 bp CGGGGTACTCCGTGTCGCAGGGCTGCAGCGGGTCCTGCTTCTTGTGTTTGTGGGACTCCACGATCCCGTTaGCCTCCCGGATGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: RGTPCRRAAAGPASCVCGTPRSR*PPGWPA
Trigger: AGCCGGCCATCCGGGAGGCCAACGGGATCGTGGAGT...CCCACAAACACAAGAAGCAGGACCCGCTGCAGCCCTGCGACACGGAGTACCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000537923.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
ENST00000647066.1
CDS-3UTR CCA 90 bp TGGTACACGAACACGGGGTACTCCGTGTCGCAGGGCTGCAGCGGGTCCTGCTTCCGCCGGCGGAGCTTCTaGGAGCGCATCCGGTCACAT +
Preference number: 4 (lower is better)
Translates to: WYTNTGYSVSQGCSGSCFRRRSF*ERIRSH
Trigger: ATGTGACCGGATGCGCTCCCAGAAGCTCCGCCGGCG...GAAGCAGGACCCGCTGCAGCCCTGCGACACGGAGTACCCCGTGTTCGTGTACCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR CCA 90 bp CATTCTCCTCTGGATGGAAGGCGTGGCAGGAGTCTGGTCGCCGGCGGAGCTTCTGGCGTGGCAGGAGTCTaGTCGCCGGCGGAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: HSPLDGRRGRSLVAGGASGVAGV*SPAELL
Trigger: CAGAAGCTCCGCCGGCGACCAGACTCCTGCCACGCC...AGAAGCTCCGCCGGCGACCAGACTCCTGCCACGCCTTCCATCCAGAGGAGAATG
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR CCA 90 bp CTGCAGCAGCCACCTGGTCGCCGTCAAGAAGGCAGAAATTGGGCTGACCAGGGGGGCGTGGCAGGAGTCTaGTCGCCGGCGGAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: LQQPPGRRQEGRNWADQGGVAGV*SPAELL
Trigger: CAGAAGCTCCGCCGGCGACCAGACTCCTGCCACGCC...CCCCTGGTCAGCCCAATTTCTGCCTTCTTGACGGCGACCAGGTGGCTGCTGCAG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 8 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR CCA 90 bp GCAGGGCCCGCACTCCACGATCCCGTTGGCCTCCCGGATGGCCGGCTGGTACACGCATTCTCCTCTGGATaGAAGGCGTGGCAGGAGTCT +
Preference number: 4 (lower is better)
Translates to: AGPALHDPVGLPDGRLVHAFSSG*KAWQES
Trigger: AGACTCCTGCCACGCCTTCCATCCAGAGGAGAATGC...GTGTACCAGCCGGCCATCCGGGAGGCCAACGGGATCGTGGAGTGCGGGCCCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR CCA 90 bp TCCACGATCCCGTTGGCCTCCCGGATGGCCGGCTGGTACACGAACACGGGGTACTGTCACCGCAGGAGTTaGGGCAGTAGCCCCCAGGCA +
Preference number: 4 (lower is better)
Translates to: STIPLASRMAGWYTNTGYCHRRS*GSSPQA
Trigger: TGCCTGGGGGCTACTGCCCCAACTCCTGCGGTGACA...GTACCCCGTGTTCGTGTACCAGCCGGCCATCCGGGAGGCCAACGGGATCGTGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR CCA 90 bp CCCGCACTCCACGATCCCGTTGGCCTCCCGGATGGCCGGCTGGTACACGAACACACAGGTCAGGCTGGGTaGTGTCACCGCAGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: PALHDPVGLPDGRLVHEHTGQAG*CHRRSW
Trigger: CCAACTCCTGCGGTGACACCACCCAGCCTGACCTGT...GTGTTCGTGTACCAGCCGGCCATCCGGGAGGCCAACGGGATCGTGGAGTGCGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR CCA 90 bp CGGCTGGTACACGAACACGGGGTACTCCGTGTCGCAGGGCTGCAGCGGGTCCTGACAGGTCAGGCTGGGTaGTGTCACCGCAGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: RLVHEHGVLRVAGLQRVLTGQAG*CHRRSW
Trigger: CCAACTCCTGCGGTGACACCACCCAGCCTGACCTGT...CAGGACCCGCTGCAGCCCTGCGACACGGAGTACCCCGTGTTCGTGTACCAGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR CCA 90 bp TGGCCGGCTGGTACACGAACACGGGGTACTCCGTGTCGCAGGGCTGCAGCGGGTGCCTGCTGTTTGTGCTaGGCATCTTGTACCGGGGCG +
Preference number: 4 (lower is better)
Translates to: WPAGTRTRGTPCRRAAAGACCLC*ASCTGA
Trigger: CGCCCCGGTACAAGATGCCCAGCACAAACAGCAGGC...ACCCGCTGCAGCCCTGCGACACGGAGTACCCCGTGTTCGTGTACCAGCCGGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
CDS-3UTR CCA 90 bp AGTAGGGGCGGCGAGGCTGAGGTGTCCGAGGCGCCGCCGCAGTCCTGGGCATTCAATTCCAGCTTCATTTaGACGCCCGCGGCTACAGGG +
Preference number: 4 (lower is better)
Translates to: SRGGEAEVSEAPPQSWAFNSSFI*TPAATG
Trigger: CCCTGTAGCCGCGGGCGTCCAAATGAAGCTGGAATT...GAATGCCCAGGACTGCGGCGGCGCCTCGGACACCTCAGCCTCGCCGCCCCTACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646498.1
3UTR CAA 72 bp AATACCTTCTGGCAGGGCCCGCACTCCACGATCCCGTaGGCCTCCCGGATGGCCGGCTGGTACACGAACACG +
Preference number: 4 (lower is better)
Translates to: NTFWQGPHSTIP*ASRMAGWYTNT
Trigger: CGTGTTCGTGTACCAGCCGGCCATCCGGGAGGCCAACGGGATCGTGGAGTGCGGGCCCTGCCAGAAGGTATT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000537923.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
ENST00000647066.1
CDS-3UTR TCA 90 bp GAGGCTGAGGTGTCCGAGGCGCCGCCGCAGTCCTGGGCATTCTCCTCTGGATGGAGCAGCCACAGACCATaGGCTCTGTCTGCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: EAEVSEAPPQSWAFSSGWSSHRP*ALSAFL
Trigger: GAGGAAGGCAGACAGAGCTCATGGTCTGTGGCTGCT...CCATCCAGAGGAGAATGCCCAGGACTGCGGCGGCGCCTCGGACACCTCAGCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
CDS-3UTR TCA 90 bp GGTGTCCGAGGCGCCGCCGCAGTCCTGGGCATTCTCCTCTGGATGGAAGGCGTGTCTGAGCCTGCGAGCTaGGGAGCTTGCTGTCCATGT +
Preference number: 4 (lower is better)
Translates to: GVRGAAAVLGILLWMEGVSEPAS*GACCPC
Trigger: ACATGGACAGCAAGCTCCTCAGCTCGCAGGCTCAGA...CACGCCTTCCATCCAGAGGAGAATGCCCAGGACTGCGGCGGCGCCTCGGACACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
CDS-3UTR TCA 90 bp ACAAATACCTTCTGGCAGGGCCCGCACTCCACGATCCCGTTGGCCTCCCGGATGGCCAGCAGGATGCTCTaGGGCCTGGCGGTACCACAG +
Preference number: 4 (lower is better)
Translates to: TNTFWQGPHSTIPLASRMASRML*GLAVPQ
Trigger: CTGTGGTACCGCCAGGCCTCAGAGCATCCTGCTGGC...CATCCGGGAGGCCAACGGGATCGTGGAGTGCGGGCCCTGCCAGAAGGTATTTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000646018.1
ENST00000646946.1
CDS-3UTR TCA 90 bp GCAGCTCTGTGTGCACGGCCCATCCACAGTGCTGCACTGCAGCAATGGCTGTCCGCCAGCAGGATGCTCTaGGGCCTGGCGGTACCACAG +
Preference number: 4 (lower is better)
Translates to: AALCARPIHSAALQQWLSASRML*GLAVPQ
Trigger: CTGTGGTACCGCCAGGCCTCAGAGCATCCTGCTGGC...GGACAGCCATTGCTGCAGTGCAGCACTGTGGATGGGCCGTGCACACAGAGCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
CDS-3UTR TCA 90 bp TGGCCGGCTGGTACACGAACACGGGGTACTCCGTGTCGCAGGGCTGCAGCGGGTGCTGCACTGTGGTGGTaGCTCGAGGGTTTGCACATG +
Preference number: 4 (lower is better)
Translates to: WPAGTRTRGTPCRRAAAGAALWW*LEGLHM
Trigger: CATGTGCAAACCCTCGAGTCACCACCACAGTGCAGC...ACCCGCTGCAGCCCTGCGACACGGAGTACCCCGTGTTCGTGTACCAGCCGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000537923.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
ENST00000647066.1
CDS-3UTR TCA 90 bp GATGGCCGGCTGGTACACGAACACGGGGTACTCCGTGTCGCAGGGCTGCAGCGGGCTGCACTGTGGTGGTaGCTCGAGGGTTTGCACATG +
Preference number: 4 (lower is better)
Translates to: DGRLVHEHGVLRVAGLQRAALWW*LEGLHM
Trigger: CATGTGCAAACCCTCGAGTCACCACCACAGTGCAGC...CCGCTGCAGCCCTGCGACACGGAGTACCCCGTGTTCGTGTACCAGCCGGCCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000537923.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
ENST00000647066.1
CDS-3UTR TCA 90 bp TTCTGGCAGGGCCCGCACTCCACGATCCCGTTGGCCTCCCGGATGGCCGGCTGGAGGGTCAGAAACAACTaGCCCTTTCTTGGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: FWQGPHSTIPLASRMAGWRVRNN*PFLGWV
Trigger: GACCCAGCCAAGAAAGGGTCAGTTGTTTCTGACCCT...CCAGCCGGCCATCCGGGAGGCCAACGGGATCGTGGAGTGCGGGCCCTGCCAGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR TCA 90 bp GCGTGGCAGGAGTCTGGTCGCCGGCGGAGCTTCTGGGAGCGCATCCGGTCACATAGTGGCCTCCCACCATaGGCCTCACTTTGGGGAATC +
Preference number: 4 (lower is better)
Translates to: AWQESGRRRSFWERIRSHSGLPP*ASLWGI
Trigger: GATTCCCCAAAGTGAGGCTCATGGTGGGAGGCCACT...ATGTGACCGGATGCGCTCCCAGAAGCTCCGCCGGCGACCAGACTCCTGCCACGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR TCA 90 bp CGTTGGCCTCCCGGATGGCCGGCTGGTACACGAACACGGGGTACTCCGTGTCGCAGTGGCCTCCCACCATaGGCCTCACTTTGGGGAATC +
Preference number: 4 (lower is better)
Translates to: RWPPGWPAGTRTRGTPCRSGLPP*ASLWGI
Trigger: GATTCCCCAAAGTGAGGCTCATGGTGGGAGGCCACT...GCGACACGGAGTACCCCGTGTTCGTGTACCAGCCGGCCATCCGGGAGGCCAACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR GCA 90 bp GACGTGTTCCCCAGAAGGATGTATTCTCCGTGGCCCCGGGACAGCACCACCCCCAGGGCCGAGGTCTTCTaGACAAAGGCCCAGGCCACG +
Preference number: 4 (lower is better)
Translates to: DVFPRRMYSPWPRDSTTPRAEVF*TKAQAT
Trigger: CGTGGCCTGGGCCTTTGTGCAGAAGACCTCGGCCCT...GGGGGTGGTGCTGTCCCGGGGCCACGGAGAATACATCCTTCTGGGGAACACGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
CDS-3UTR GCA 90 bp GCAGGGCCCGCACTCCACGATCCCGTTGGCCTCCCGGATGGCCGGCTGGTACACACTTTCTGGTCCTTCTaGCCAGCGGAGGTTGAAGAC +
Preference number: 4 (lower is better)
Translates to: AGPALHDPVGLPDGRLVHTFWSF*PAEVED
Trigger: GTCTTCAACCTCCGCTGGGCAGAAGGACCAGAAAGT...GTGTACCAGCCGGCCATCCGGGAGGCCAACGGGATCGTGGAGTGCGGGCCCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000646018.1
ENST00000646946.1
CDS-3UTR GCA 90 bp TTCTGGCAGGGCCCGCACTCCACGATCCCGTTGGCCTCCCGGATGGCCGGCTGGTTGCCGCCCAGAATTTaGGCTGGAGGAATTCCAGCT +
Preference number: 4 (lower is better)
Translates to: FWQGPHSTIPLASRMAGWLPPRI*AGGIPA
Trigger: AGCTGGAATTCCTCCAGCGCAAATTCTGGGCGGCAA...CCAGCCGGCCATCCGGGAGGCCAACGGGATCGTGGAGTGCGGGCCCTGCCAGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000537784.5
ENST00000537923.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646498.1
ENST00000646946.1
ENST00000647066.1
CDS-3UTR GCA 90 bp GCTGCACCACAAATACCTTCTGGCAGGGCCCGCACTCCACGATCCCGTTGGCCTACGGCCCATCCACAGTaGTGCACTGCCGCGTTGCCG +
Preference number: 4 (lower is better)
Translates to: AAPQIPSGRARTPRSRWPTAHPQ*CTAALP
Trigger: CGGCAACGCGGCAGTGCAGCACTGTGGATGGGCCGT...AGGCCAACGGGATCGTGGAGTGCGGGCCCTGCCAGAAGGTATTTGTGGTGCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000537784.5
ENST00000537923.5
ENST00000585385.5
ENST00000642253.1
ENST00000646946.1
ENST00000647066.1
CDS-3UTR GCA 90 bp CACCACAAATACCTTCTGGCAGGGCCCGCACTCCACGATCCCGTTGGCCTCCCGCCTCGCAGCTCTGTGTaGACGGCCCATCCACAGTGC +
Preference number: 4 (lower is better)
Translates to: HHKYLLAGPALHDPVGLPPRSSV*TAHPQC
Trigger: GCACTGTGGATGGGCCGTGCACACAGAGCTGCGAGG...CGGGAGGCCAACGGGATCGTGGAGTGCGGGCCCTGCCAGAAGGTATTTGTGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000537923.5
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646946.1
ENST00000647066.1
CDS-3UTR GCA 90 bp AGCAGGAGTAGGGGCGGCGAGGCTGAGGTGTCCGAGGCGCCGCCGCAGTCCTGGGGTGACTCGAGGGTTTaGACATGGCCTGATAGTCAT +
Preference number: 4 (lower is better)
Translates to: SRSRGGEAEVSEAPPQSWGDSRV*TWPDSH
Trigger: ATGACTATCAGGCCATGTGCAAACCCTCGAGTCACC...CCAGGACTGCGGCGGCGCCTCGGACACCTCAGCCTCGCCGCCCCTACTCCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR CCA 90 bp GATCCCGTTGGCCTCCCGGATGGCCGGCTGGTACACGAACACGGGGTACTCCGTTTGTCTTCCGTGCCTTaGCGAGCCTGGGGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: DPVGLPDGRLVHEHGVLRLSSVP*RAWGLQ
Trigger: CTGGAGACCCCAGGCTCGCCAAGGCACGGAAGACAA...ACGGAGTACCCCGTGTTCGTGTACCAGCCGGCCATCCGGGAGGCCAACGGGATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
CDS-3UTR CCA 90 bp GGAGTCTGGTCGCCGGCGGAGCTTCTGGGAGCGCATCCGGTCACATTTGACAGAGCCACGGGCATTGGCTaGAGGGGAATCCAGCGGCTG +
Preference number: 4 (lower is better)
Translates to: GVWSPAELLGAHPVTFDRATGIG*RGIQRL
Trigger: CAGCCGCTGGATTCCCCTCCAGCCAATGCCCGTGGC...TCTGTCAAATGTGACCGGATGCGCTCCCAGAAGCTCCGCCGGCGACCAGACTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
CDS-3UTR CCA 90 bp GGCCTCCCGGATGGCCGGCTGGTACACGAACACGGGGTACTCCGTGTCGCAGGGATCATGGCCTCTAGCTaGCTGAGCTTCCGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: GLPDGRLVHEHGVLRVAGIMASS*LSFRWS
Trigger: AGACCACCGGAAGCTCAGCCAGCTAGAGGCCATGAT...CCCTGCGACACGGAGTACCCCGTGTTCGTGTACCAGCCGGCCATCCGGGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
CDS-3UTR CCA 90 bp TGGTACACGAACACGGGGTACTCCGTGTCGCAGGGCTGCAGCGGGTCCTGCTTCTCCCGGATGGCCGGCTaGTACACGAACACGGGGTAC +
Preference number: 4 (lower is better)
Translates to: WYTNTGYSVSQGCSGSCFSRMAG*YTNTGY
Trigger: GTACCCCGTGTTCGTGTACCAGCCGGCCATCCGGGA...GAAGCAGGACCCGCTGCAGCCCTGCGACACGGAGTACCCCGTGTTCGTGTACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000537923.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
ENST00000647066.1
CDS-3UTR CCA 90 bp ACGAACACGGGGTACTCCGTGTCGCAGGGCTGCAGCGGGTCCTGCTTCTTGTGTACTCCACGATCCCGTTaGCCTCCCGGATGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: TNTGYSVSQGCSGSCFLCTPRSR*PPGWPA
Trigger: AGCCGGCCATCCGGGAGGCCAACGGGATCGTGGAGT...ACACAAGAAGCAGGACCCGCTGCAGCCCTGCGACACGGAGTACCCCGTGTTCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000537923.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
ENST00000647066.1
CDS-3UTR CCA 90 bp GGGGTACTCCGTGTCGCAGGGCTGCAGCGGGTCCTGCTTCTTGTGTTTGTGGGAACTCCACGATCCCGTTaGCCTCCCGGATGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: GVLRVAGLQRVLLLVFVGTPRSR*PPGWPA
Trigger: AGCCGGCCATCCGGGAGGCCAACGGGATCGTGGAGT...TCCCACAAACACAAGAAGCAGGACCCGCTGCAGCCCTGCGACACGGAGTACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000537923.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
ENST00000647066.1
CDS-3UTR CCA 90 bp CGAACACGGGGTACTCCGTGTCGCAGGGCTGCAGCGGGTCCTGCTTCTTGTGTTACTCCACGATCCCGTTaGCCTCCCGGATGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: RTRGTPCRRAAAGPASCVTPRSR*PPGWPA
Trigger: AGCCGGCCATCCGGGAGGCCAACGGGATCGTGGAGT...AACACAAGAAGCAGGACCCGCTGCAGCCCTGCGACACGGAGTACCCCGTGTTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000537923.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
ENST00000647066.1
CDS-3UTR CCA 90 bp TGGCCGGCTGGTACACGAACACGGGGTACTCCGTGTCGCAGGGCTGCAGCGGGTACCACAAATACCTTCTaGCAGGGCCCGCACTCCACG +
Preference number: 4 (lower is better)
Translates to: WPAGTRTRGTPCRRAAAGTTNTF*QGPHST
Trigger: CGTGGAGTGCGGGCCCTGCCAGAAGGTATTTGTGGT...ACCCGCTGCAGCCCTGCGACACGGAGTACCCCGTGTTCGTGTACCAGCCGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000537923.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
ENST00000647066.1
CDS-3UTR CCA 90 bp GGTGTCCGAGGCGCCGCCGCAGTCCTGGGCATTCTCCTCTGGATGGAAGGCGTGACCACAAATACCTTCTaGCAGGGCCCGCACTCCACG +
Preference number: 4 (lower is better)
Translates to: GVRGAAAVLGILLWMEGVTTNTF*QGPHST
Trigger: CGTGGAGTGCGGGCCCTGCCAGAAGGTATTTGTGGT...CACGCCTTCCATCCAGAGGAGAATGCCCAGGACTGCGGCGGCGCCTCGGACACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR CCA 90 bp ACGAACACGGGGTACTCCGTGTCGCAGGGCTGCAGCGGGTCCTGCTTCTTGTGTCGCCGGCGGAGCTTCTaGGAGCGCATCCGGTCACAT +
Preference number: 4 (lower is better)
Translates to: TNTGYSVSQGCSGSCFLCRRRSF*ERIRSH
Trigger: ATGTGACCGGATGCGCTCCCAGAAGCTCCGCCGGCG...ACACAAGAAGCAGGACCCGCTGCAGCCCTGCGACACGGAGTACCCCGTGTTCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR CCA 90 bp GGTGTCCGAGGCGCCGCCGCAGTCCTGGGCATTCTCCTCTGGATGGAAGGCGTGCTGGGCATTCTCCTCTaGATGGAAGGCGTGGCAGGA +
Preference number: 4 (lower is better)
Translates to: GVRGAAAVLGILLWMEGVLGILL*MEGVAG
Trigger: TCCTGCCACGCCTTCCATCCAGAGGAGAATGCCCAG...CACGCCTTCCATCCAGAGGAGAATGCCCAGGACTGCGGCGGCGCCTCGGACACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR CCA 90 bp GGAGTCTGGTCGCCGGCGGAGCTTCTGGGAGCGCATCCGGTCACATTTGACAGAGCGCCGCCGCAGTCCTaGGCATTCTCCTCTGGATGG +
Preference number: 4 (lower is better)
Translates to: GVWSPAELLGAHPVTFDRAPPQS*AFSSGW
Trigger: CCATCCAGAGGAGAATGCCCAGGACTGCGGCGGCGC...TCTGTCAAATGTGACCGGATGCGCTCCCAGAAGCTCCGCCGGCGACCAGACTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR CCA 90 bp TCCCGGATGGCCGGCTGGTACACGAACACGGGGTACTCCGTGTCGCAGGGCTGCAAACACAGGTCAGGCTaGGTGGTGTCACCGCAGGAG +
Preference number: 4 (lower is better)
Translates to: SRMAGWYTNTGYSVSQGCKHRSG*VVSPQE
Trigger: CTCCTGCGGTGACACCACCCAGCCTGACCTGTGTTT...GCAGCCCTGCGACACGGAGTACCCCGTGTTCGTGTACCAGCCGGCCATCCGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR CCA 90 bp GGCCTCCCGGATGGCCGGCTGGTACACGAACACGGGGTACTCCGTGTCGCAGGGAATTCCAGCTTCATTTaGACGCCCGCGGCTACAGGG +
Preference number: 4 (lower is better)
Translates to: GLPDGRLVHEHGVLRVAGNSSFI*TPAATG
Trigger: CCCTGTAGCCGCGGGCGTCCAAATGAAGCTGGAATT...CCCTGCGACACGGAGTACCCCGTGTTCGTGTACCAGCCGGCCATCCGGGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537923.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646498.1
ENST00000647066.1
CDS-3UTR TCA 90 bp GGCCCGCACTCCACGATCCCGTTGGCCTCCCGGATGGCCGGCTGGTACACGAACGGAGAAGTAGCAGCTTaGATGTACCAGCCGCGGTTT +
Preference number: 4 (lower is better)
Translates to: GPHSTIPLASRMAGWYTNGEVAA*MYQPRF
Trigger: AAACCGCGGCTGGTACATTCAAGCTGCTACTTCTCC...GTTCGTGTACCAGCCGGCCATCCGGGAGGCCAACGGGATCGTGGAGTGCGGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
CDS-3UTR TCA 90 bp AGGCTGAGGTGTCCGAGGCGCCGCCGCAGTCCTGGGCATTCTCCTCTGGATGGACGACCCCCACACCTTTaGCCATCAACTCCTCCACCA +
Preference number: 4 (lower is better)
Translates to: RLRCPRRRRSPGHSPLDGRPPHL*PSTPPP
Trigger: TGGTGGAGGAGTTGATGGTCAAAGGTGTGGGGGTCG...TCCATCCAGAGGAGAATGCCCAGGACTGCGGCGGCGCCTCGGACACCTCAGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
CDS-3UTR TCA 90 bp TGGTACACGAACACGGGGTACTCCGTGTCGCAGGGCTGCAGCGGGTCCTGCTTCGGTGTCCGCCAGCGTTaGGATCTGCGTGTAGTAGCC +
Preference number: 4 (lower is better)
Translates to: WYTNTGYSVSQGCSGSCFGVRQR*DLRVVA
Trigger: GGCTACTACACGCAGATCTCAACGCTGGCGGACACC...GAAGCAGGACCCGCTGCAGCCCTGCGACACGGAGTACCCCGTGTTCGTGTACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
CDS-3UTR TCA 90 bp GTGGGAGTGATGGAAGACACTTTTGGCCTCGGCCCCTCTGTCGTACCAGGAGCCGGAAGCGGTCCAGGGTaGACACGCTGGCCTCGTCCT +
Preference number: 4 (lower is better)
Translates to: VGVMEDTFGLGPSVVPGAGSGPG*TRWPRP
Trigger: AGGACGAGGCCAGCGTGTTCACCCTGGACCGCTTCC...GGCTCCTGGTACGACAGAGGGGCCGAGGCCAAAAGTGTCTTCCATCACTCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000646018.1
ENST00000646946.1
CDS-3UTR TCA 90 bp GAGCGTTGGCCTGGGGGCGACCCAACTGCAGTTAGCTGCATCCCATGTCAGTGCCTGCCCAGCGGAGGTTaGAGACGAAGCTGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: ERWPGGDPTAVSCIPCQCLPSGG*RRSCQQ
Trigger: CTGCTGGCAGCTTCGTCTTCAACCTCCGCTGGGCAG...GCACTGACATGGGATGCAGCTAACTGCAGTTGGGTCGCCCCCAGGCCAACGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000587995.5
ENST00000644394.1
ENST00000645018.2
ENST00000646018.1
ENST00000646946.1
CDS-3UTR TCA 90 bp CCTGGGCATTCTCCTCTGGATGGAAGGCGTGGCAGGAGTCTGGTCGCCGGCGGAGCTGCACTGTGGTGGTaGCTCGAGGGTTTGCACATG +
Preference number: 4 (lower is better)
Translates to: PGHSPLDGRRGRSLVAGGAALWW*LEGLHM
Trigger: CATGTGCAAACCCTCGAGTCACCACCACAGTGCAGC...TCCGCCGGCGACCAGACTCCTGCCACGCCTTCCATCCAGAGGAGAATGCCCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR TCA 90 bp TCTGGCAGGGCCCGCACTCCACGATCCCGTTGGCCTCCCGGATGGCCGGCTGGTGAAAGTGGTGCCAGGTaGTTGGTTTCCTGTTCCATC +
Preference number: 4 (lower is better)
Translates to: SGRARTPRSRWPPGWPAGESGAR*LVSCSI
Trigger: GATGGAACAGGAAACCAATCACCTGGCACCACTTTC...ACCAGCCGGCCATCCGGGAGGCCAACGGGATCGTGGAGTGCGGGCCCTGCCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR GCA 90 bp CTGCAGCAGCCACCTGGTCGCCGTCAAGAAGGCAGAAATTGGGCTGACCAGGGGGGCCTTTGTCTTCCGTaGCTTGGCGAGCCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: LQQPPGRRQEGRNWADQGGLCLP*LGEPGV
Trigger: GACCCCAGGCTCGCCAAGGCACGGAAGACAAAGGCC...CCCCTGGTCAGCCCAATTTCTGCCTTCTTGACGGCGACCAGGTGGCTGCTGCAG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
CDS-3UTR GCA 90 bp ATTCTCCTCTGGATGGAAGGCGTGGCAGGAGTCTGGTCGCCGGCGGAGCTTCTGGGGGAATCCAGCGGCTaGTGGAGCTGGGGTTTGCGA +
Preference number: 4 (lower is better)
Translates to: ILLWMEGVAGVWSPAELLGESSG*WSWGLR
Trigger: TCGCAAACCCCAGCTCCAGCAGCCGCTGGATTCCCC...CAGAAGCTCCGCCGGCGACCAGACTCCTGCCACGCCTTCCATCCAGAGGAGAAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
CDS-3UTR GCA 90 bp AGCAGGAGTAGGGGCGGCGAGGCTGAGGTGTCCGAGGCGCCGCCGCAGTCCTGGGCCTTTGTTGTTGCATaGAATCCACTTCATGCGGTC +
Preference number: 4 (lower is better)
Translates to: SRSRGGEAEVSEAPPQSWAFVVA*NPLHAV
Trigger: GACCGCATGAAGTGGATTGCATGCAACAACAAAGGC...CCAGGACTGCGGCGGCGCCTCGGACACCTCAGCCTCGCCGCCCCTACTCCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
CDS-3UTR GCA 90 bp GTGCCAGGTGATTGGTTTCCTGTTCCATCCAGCATTCTCCGGAGCCAGGGGCCAGGAGGCCAGCCCGGGTaGCCAGGAAGGCCATGTCCA +
Preference number: 4 (lower is better)
Translates to: VPGDWFPVPSSILRSQGPGGQPG*PGRPCP
Trigger: TGGACATGGCCTTCCTGGGCACCCGGGCTGGCCTCC...TGGCCCCTGGCTCCGGAGAATGCTGGATGGAACAGGAAACCAATCACCTGGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000587995.5
ENST00000644394.1
ENST00000645018.2
ENST00000646018.1
ENST00000646946.1
CDS-3UTR GCA 90 bp CGAACACGGGGTACTCCGTGTCGCAGGGCTGCAGCGGGTCCTGCTTCTTGTGTTGCTGCACTGCCGCGTTaGCGCCCAGAATTTGCGCTG +
Preference number: 4 (lower is better)
Translates to: RTRGTPCRRAAAGPASCVAALPR*RPEFAL
Trigger: CAGCGCAAATTCTGGGCGGCAACGCGGCAGTGCAGC...AACACAAGAAGCAGGACCCGCTGCAGCCCTGCGACACGGAGTACCCCGTGTTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537784.5
ENST00000537923.5
ENST00000585385.5
ENST00000642253.1
ENST00000646946.1
ENST00000647066.1
CDS-3UTR GCA 90 bp GAACACGGGGTACTCCGTGTCGCAGGGCTGCAGCGGGTCCTGCTTCTTGTGTTTACGGCCCATCCACAGTaGTGCACTGCCGCGTTGCCG +
Preference number: 4 (lower is better)
Translates to: EHGVLRVAGLQRVLLLVFTAHPQ*CTAALP
Trigger: CGGCAACGCGGCAGTGCAGCACTGTGGATGGGCCGT...AAACACAAGAAGCAGGACCCGCTGCAGCCCTGCGACACGGAGTACCCCGTGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537784.5
ENST00000537923.5
ENST00000585385.5
ENST00000642253.1
ENST00000646946.1
ENST00000647066.1
CDS-3UTR GCA 90 bp CATTCTCCTCTGGATGGAAGGCGTGGCAGGAGTCTGGTCGCCGGCGGAGCTTCTCCTCGCAGCTCTGTGTaGACGGCCCATCCACAGTGC +
Preference number: 4 (lower is better)
Translates to: HSPLDGRRGRSLVAGGASPRSSV*TAHPQC
Trigger: GCACTGTGGATGGGCCGTGCACACAGAGCTGCGAGG...AGAAGCTCCGCCGGCGACCAGACTCCTGCCACGCCTTCCATCCAGAGGAGAATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646946.1
CDS-3UTR GCA 90 bp TGCAGCAGCCACCTGGTCGCCGTCAAGAAGGCAGAAATTGGGCTGACCAGGGGCTCCGTGTCGCAGGGCTaGAGCGGGTCCTGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: CSSHLVAVKKAEIGLTRGSVSQG*SGSCFL
Trigger: CAAGAAGCAGGACCCGCTGCAGCCCTGCGACACGGA...GCCCCTGGTCAGCCCAATTTCTGCCTTCTTGACGGCGACCAGGTGGCTGCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000537923.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
ENST00000647066.1
CDS-3UTR GCA 90 bp TGCACCACAAATACCTTCTGGCAGGGCCCGCACTCCACGATCCCGTTGGCCTCCTCCGTGTCGCAGGGCTaGAGCGGGTCCTGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: CTTNTFWQGPHSTIPLASSVSQG*SGSCFL
Trigger: CAAGAAGCAGGACCCGCTGCAGCCCTGCGACACGGA...GGAGGCCAACGGGATCGTGGAGTGCGGGCCCTGCCAGAAGGTATTTGTGGTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000537923.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
ENST00000647066.1
CDS-3UTR GCA 90 bp GGAGTCTGGTCGCCGGCGGAGCTTCTGGGAGCGCATCCGGTCACATTTGACAGACCGTGCACTCCAAGCTaGCAGAGTCCAGGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: GVWSPAELLGAHPVTFDRPCTPS*QSPGWR
Trigger: CCTCCACCCTGGACTCTGGCAGCTTGGAGTGCACGG...TCTGTCAAATGTGACCGGATGCGCTCCCAGAAGCTCCGCCGGCGACCAGACTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
CDS-3UTR CCA 90 bp TGTCACCACCGCGTCAAACAGCACCTCCCGGACCAGCTCCTCGTCACACTCCAGCCTCTCAGTCCTGGGTaGGGAGGGCTTCTCTCTGCC +
Preference number: 4 (lower is better)
Translates to: CHHRVKQHLPDQLLVTLQPLSPG*GGLLSA
Trigger: GGCAGAGAGAAGCCCTCCCCACCCAGGACTGAGAGG...CTGGAGTGTGACGAGGAGCTGGTCCGGGAGGTGCTGTTTGACGCGGTGGTGACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
CDS-3UTR CCA 90 bp GTTGGCCTGGGGGCGACCCAACTGCAGTTAGCTGCATCCCATGTCAGTGCTGACGCCACGGGCATTGGCTaGAGGGGAATCCAGCGGCTG +
Preference number: 4 (lower is better)
Translates to: VGLGATQLQLAASHVSADATGIG*RGIQRL
Trigger: CAGCCGCTGGATTCCCCTCCAGCCAATGCCCGTGGC...GTCAGCACTGACATGGGATGCAGCTAACTGCAGTTGGGTCGCCCCCAGGCCAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000587995.5
ENST00000644394.1
ENST00000645018.2
ENST00000646018.1
CDS-3UTR CCA 90 bp TCTGCTGCACCACAAATACCTTCTGGCAGGGCCCGCACTCCACGATCCCGTTGGCCAGGCCACGGGCATTaGCTGGAGGGGAATCCAGCG +
Preference number: 4 (lower is better)
Translates to: SAAPQIPSGRARTPRSRWPGHGH*LEGNPA
Trigger: CGCTGGATTCCCCTCCAGCCAATGCCCGTGGCCTGG...CCAACGGGATCGTGGAGTGCGGGCCCTGCCAGAAGGTATTTGTGGTGCAGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
CDS-3UTR CCA 90 bp AGCTCCTGCAGCAGCCACCTGGTCGCCGTCAAGAAGGCAGAAATTGGGCTGACCCCAGGCCACGGGCATTaGCTGGAGGGGAATCCAGCG +
Preference number: 4 (lower is better)
Translates to: SSCSSHLVAVKKAEIGLTPGHGH*LEGNPA
Trigger: CGCTGGATTCCCCTCCAGCCAATGCCCGTGGCCTGG...GGTCAGCCCAATTTCTGCCTTCTTGACGGCGACCAGGTGGCTGCTGCAGGAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
CDS-3UTR CCA 90 bp CCCGTTGGCCTCCCGGATGGCCGGCTGGTACACGAACACGGGGTACTCCGTGTCATCATGGCCTCTAGCTaGCTGAGCTTCCGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: PVGLPDGRLVHEHGVLRVIMASS*LSFRWS
Trigger: AGACCACCGGAAGCTCAGCCAGCTAGAGGCCATGAT...GACACGGAGTACCCCGTGTTCGTGTACCAGCCGGCCATCCGGGAGGCCAACGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
CDS-3UTR CCA 90 bp ACGAACACGGGGTACTCCGTGTCGCAGGGCTGCAGCGGGTCCTGCTTCTTGTGTGGATGCTCTGAGGCCTaGCGGTACCACAGCGGGAAG +
Preference number: 4 (lower is better)
Translates to: TNTGYSVSQGCSGSCFLCGCSEA*RYHSGK
Trigger: CTTCCCGCTGTGGTACCGCCAGGCCTCAGAGCATCC...ACACAAGAAGCAGGACCCGCTGCAGCCCTGCGACACGGAGTACCCCGTGTTCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000646018.1
ENST00000646946.1
CDS-3UTR CCA 90 bp GATCCCGTTGGCCTCCCGGATGGCCGGCTGGTACACGAACACGGGGTACTCCGTCAAGAAGGCAGAAATTaGGCTGACCAGGGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: DPVGLPDGRLVHEHGVLRQEGRN*ADQGLG
Trigger: GCCCAGCCCCTGGTCAGCCCAATTTCTGCCTTCTTG...ACGGAGTACCCCGTGTTCGTGTACCAGCCGGCCATCCGGGAGGCCAACGGGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000537923.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
ENST00000647066.1
CDS-3UTR CCA 90 bp GGGGTACTCCGTGTCGCAGGGCTGCAGCGGGTCCTGCTTCTTGTGTTTGTGGGACCTGCAGCAGCCACCTaGTCGCCGTCAAGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: GVLRVAGLQRVLLLVFVGPAAAT*SPSRRQ
Trigger: CTGCCTTCTTGACGGCGACCAGGTGGCTGCTGCAGG...TCCCACAAACACAAGAAGCAGGACCCGCTGCAGCCCTGCGACACGGAGTACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000537923.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
ENST00000647066.1
CDS-3UTR CCA 90 bp GAGCGTTGGCCTGGGGGCGACCCAACTGCAGTTAGCTGCATCCCATGTCAGTGCTCCCGGATGGCCGGCTaGTACACGAACACGGGGTAC +
Preference number: 4 (lower is better)
Translates to: ERWPGGDPTAVSCIPCQCSRMAG*YTNTGY
Trigger: GTACCCCGTGTTCGTGTACCAGCCGGCCATCCGGGA...GCACTGACATGGGATGCAGCTAACTGCAGTTGGGTCGCCCCCAGGCCAACGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000585385.5
ENST00000587995.5
ENST00000642253.1
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR CCA 90 bp TACACGAACACGGGGTACTCCGTGTCGCAGGGCTGCAGCGGGTCCTGCTTCTTGTCCCGGATGGCCGGCTaGTACACGAACACGGGGTAC +
Preference number: 4 (lower is better)
Translates to: YTNTGYSVSQGCSGSCFLSRMAG*YTNTGY
Trigger: GTACCCCGTGTTCGTGTACCAGCCGGCCATCCGGGA...CAAGAAGCAGGACCCGCTGCAGCCCTGCGACACGGAGTACCCCGTGTTCGTGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000537923.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
ENST00000647066.1
CDS-3UTR CCA 90 bp TGGCAGGGCCCGCACTCCACGATCCCGTTGGCCTCCCGGATGGCCGGCTGGTACGGAGGAGGTTACTGTTaGGAATCTGCTGCACCACAA +
Preference number: 4 (lower is better)
Translates to: WQGPHSTIPLASRMAGWYGGGYC*ESAAPQ
Trigger: TTGTGGTGCAGCAGATTCCCAACAGTAACCTCCTCC...GTACCAGCCGGCCATCCGGGAGGCCAACGGGATCGTGGAGTGCGGGCCCTGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000537923.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
ENST00000647066.1
CDS-3UTR CCA 90 bp CGGCTGGTACACGAACACGGGGTACTCCGTGTCGCAGGGCTGCAGCGGGTCCTGCTCCTGCAGCACTGGTaGGAAGATGCTGCAGTCACA +
Preference number: 4 (lower is better)
Translates to: RLVHEHGVLRVAGLQRVLLLQHW*EDAAVT
Trigger: TGTGACTGCAGCATCTTCCCACCAGTGCTGCAGGAG...CAGGACCCGCTGCAGCCCTGCGACACGGAGTACCCCGTGTTCGTGTACCAGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000537923.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
ENST00000647066.1
CDS-3UTR CCA 90 bp CCGGATGGCCGGCTGGTACACGAACACGGGGTACTCCGTGTCGCAGGGCTGCAGCTCCTGCAGCACTGGTaGGAAGATGCTGCAGTCACA +
Preference number: 4 (lower is better)
Translates to: PDGRLVHEHGVLRVAGLQLLQHW*EDAAVT
Trigger: TGTGACTGCAGCATCTTCCCACCAGTGCTGCAGGAG...CTGCAGCCCTGCGACACGGAGTACCCCGTGTTCGTGTACCAGCCGGCCATCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000537923.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
ENST00000647066.1
CDS-3UTR CCA 90 bp TGGCCTCCCGGATGGCCGGCTGGTACACGAACACGGGGTACTCCGTGTCGCAGGGCATTCTCCTCTGGATaGAAGGCGTGGCAGGAGTCT +
Preference number: 4 (lower is better)
Translates to: WPPGWPAGTRTRGTPCRRAFSSG*KAWQES
Trigger: AGACTCCTGCCACGCCTTCCATCCAGAGGAGAATGC...CCTGCGACACGGAGTACCCCGTGTTCGTGTACCAGCCGGCCATCCGGGAGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR CCA 90 bp TGGCCGGCTGGTACACGAACACGGGGTACTCCGTGTCGCAGGGCTGCAGCGGGTGCATTCTCCTCTGGATaGAAGGCGTGGCAGGAGTCT +
Preference number: 4 (lower is better)
Translates to: WPAGTRTRGTPCRRAAAGAFSSG*KAWQES
Trigger: AGACTCCTGCCACGCCTTCCATCCAGAGGAGAATGC...ACCCGCTGCAGCCCTGCGACACGGAGTACCCCGTGTTCGTGTACCAGCCGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR CCA 90 bp TCTGCTGCACCACAAATACCTTCTGGCAGGGCCCGCACTCCACGATCCCGTTGGGCGCCGCCGCAGTCCTaGGCATTCTCCTCTGGATGG +
Preference number: 4 (lower is better)
Translates to: SAAPQIPSGRARTPRSRWAPPQS*AFSSGW
Trigger: CCATCCAGAGGAGAATGCCCAGGACTGCGGCGGCGC...CCAACGGGATCGTGGAGTGCGGGCCCTGCCAGAAGGTATTTGTGGTGCAGCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR CCA 90 bp ACGAACACGGGGTACTCCGTGTCGCAGGGCTGCAGCGGGTCCTGCTTCTTGTGTTGTCACCGCAGGAGTTaGGGCAGTAGCCCCCAGGCA +
Preference number: 4 (lower is better)
Translates to: TNTGYSVSQGCSGSCFLCCHRRS*GSSPQA
Trigger: TGCCTGGGGGCTACTGCCCCAACTCCTGCGGTGACA...ACACAAGAAGCAGGACCCGCTGCAGCCCTGCGACACGGAGTACCCCGTGTTCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR CCA 90 bp GGTACACGAACACGGGGTACTCCGTGTCGCAGGGCTGCAGCGGGTCCTGCTTCTCTGGGATCCAGGTCTTaGGGTTTGGTCGGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: GTRTRGTPCRRAAAGPASLGSRS*GLVGGG
Trigger: TCCTCCCCCGACCAAACCCCAAGACCTGGATCCCAG...AGAAGCAGGACCCGCTGCAGCCCTGCGACACGGAGTACCCCGTGTTCGTGTACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537784.5
ENST00000646946.1
CDS-3UTR CCA 90 bp TGGTACACGAACACGGGGTACTCCGTGTCGCAGGGCTGCAGCGGGTCCTGCTTCTGCCAGAGTCCAGGGTaGAGGCGCATTAGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: WYTNTGYSVSQGCSGSCFCQSPG*RRIRPA
Trigger: AGCAGGCCTAATGCGCCTCCACCCTGGACTCTGGCA...GAAGCAGGACCCGCTGCAGCCCTGCGACACGGAGTACCCCGTGTTCGTGTACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
CDS-3UTR CCA 90 bp GAGGCTGAGGTGTCCGAGGCGCCGCCGCAGTCCTGGGCATTCTCCTCTGGATGGAATTCCAGCTTCATTTaGACGCCCGCGGCTACAGGG +
Preference number: 4 (lower is better)
Translates to: EAEVSEAPPQSWAFSSGWNSSFI*TPAATG
Trigger: CCCTGTAGCCGCGGGCGTCCAAATGAAGCTGGAATT...CCATCCAGAGGAGAATGCCCAGGACTGCGGCGGCGCCTCGGACACCTCAGCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646498.1
CDS-3UTR TCA 90 bp TCCACGATCCCGTTGGCCTCCCGGATGGCCGGCTGGTACACGAACACGGGGTACTCACCGGCAGGTTGCTaGAGTGAGCATTGGACTCCA +
Preference number: 4 (lower is better)
Translates to: STIPLASRMAGWYTNTGYSPAGC*SEHWTP
Trigger: TGGAGTCCAATGCTCACTTCAGCAACCTGCCGGTGA...GTACCCCGTGTTCGTGTACCAGCCGGCCATCCGGGAGGCCAACGGGATCGTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
CDS-3UTR TCA 90 bp GCAGGGCCCGCACTCCACGATCCCGTTGGCCTCCCGGATGGCCGGCTGGTACACCTGGGTCAATATCTGTaGTGCAGTAGATCCAGTCAC +
Preference number: 4 (lower is better)
Translates to: AGPALHDPVGLPDGRLVHLGQYL*CSRSSH
Trigger: GTGACTGGATCTACTGCATCACAGATATTGACCCAG...GTGTACCAGCCGGCCATCCGGGAGGCCAACGGGATCGTGGAGTGCGGGCCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
CDS-3UTR TCA 90 bp CAGGTGATTGGTTTCCTGTTCCATCCAGCATTCTCCGGAGCCAGGGGCCACCAGGCCAGCAGGATGCTCTaGGGCCTGGCGGTACCACAG +
Preference number: 4 (lower is better)
Translates to: QVIGFLFHPAFSGARGHQASRML*GLAVPQ
Trigger: CTGTGGTACCGCCAGGCCTCAGAGCATCCTGCTGGC...CTGGTGGCCCCTGGCTCCGGAGAATGCTGGATGGAACAGGAAACCAATCACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000587995.5
ENST00000644394.1
ENST00000645018.2
ENST00000646018.1
ENST00000646946.1
CDS-3UTR TCA 90 bp GTTGGCCTGGGGGCGACCCAACTGCAGTTAGCTGCATCCCATGTCAGTGCTGACCTGCCCAGCGGAGGTTaGAGACGAAGCTGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: VGLGATQLQLAASHVSADLPSGG*RRSCQQ
Trigger: CTGCTGGCAGCTTCGTCTTCAACCTCCGCTGGGCAG...GTCAGCACTGACATGGGATGCAGCTAACTGCAGTTGGGTCGCCCCCAGGCCAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000587995.5
ENST00000644394.1
ENST00000645018.2
ENST00000646018.1
ENST00000646946.1
CDS-3UTR TCA 90 bp GTGGGAGTGATGGAAGACACTTTTGGCCTCGGCCCCTCTGTCGTACCAGGAGCCCTGCCCAGCGGAGGTTaGAGACGAAGCTGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: VGVMEDTFGLGPSVVPGALPSGG*RRSCQQ
Trigger: CTGCTGGCAGCTTCGTCTTCAACCTCCGCTGGGCAG...GGCTCCTGGTACGACAGAGGGGCCGAGGCCAAAAGTGTCTTCCATCACTCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000646018.1
ENST00000646946.1
CDS-3UTR TCA 90 bp GAGCGTTGGCCTGGGGGCGACCCAACTGCAGTTAGCTGCATCCCATGTCAGTGCTGTCTTGGTCCAAGCTaGGCTCACGCTGGCTTCCCG +
Preference number: 4 (lower is better)
Translates to: ERWPGGDPTAVSCIPCQCCLGPS*AHAGFP
Trigger: CGGGAAGCCAGCGTGAGCTCAGCTTGGACCAAGACA...GCACTGACATGGGATGCAGCTAACTGCAGTTGGGTCGCCCCCAGGCCAACGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000587995.5
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR TCA 90 bp GGAGTCTGGTCGCCGGCGGAGCTTCTGGGAGCGCATCCGGTCACATTTGACAGATGTCTTGGTCCAAGCTaGGCTCACGCTGGCTTCCCG +
Preference number: 4 (lower is better)
Translates to: GVWSPAELLGAHPVTFDRCLGPS*AHAGFP
Trigger: CGGGAAGCCAGCGTGAGCTCAGCTTGGACCAAGACA...TCTGTCAAATGTGACCGGATGCGCTCCCAGAAGCTCCGCCGGCGACCAGACTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR GCA 90 bp TACTATGCCCCTTTCCCCGAGGCTCAGGCAGGAGGCGGTTCTGATGCTTCTGCCGGGGAATCCAGCGGCTaGTGGAGCTGGGGTTTGCGA +
Preference number: 4 (lower is better)
Translates to: YYAPFPEAQAGGGSDASAGESSG*WSWGLR
Trigger: TCGCAAACCCCAGCTCCAGCAGCCGCTGGATTCCCC...GGCAGAAGCATCAGAACCGCCTCCTGCCTGAGCCTCGGGGAAAGGGGCATAGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000585732.1
ENST00000647100.1
CDS-3UTR GCA 90 bp GTTGGCCTGGGGGCGACCCAACTGCAGTTAGCTGCATCCCATGTCAGTGCTGACAGGGCCGAGGTCTTCTaGACAAAGGCCCAGGCCACG +
Preference number: 4 (lower is better)
Translates to: VGLGATQLQLAASHVSADRAEVF*TKAQAT
Trigger: CGTGGCCTGGGCCTTTGTGCAGAAGACCTCGGCCCT...GTCAGCACTGACATGGGATGCAGCTAACTGCAGTTGGGTCGCCCCCAGGCCAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000587995.5
ENST00000644394.1
ENST00000645018.2
ENST00000646018.1
CDS-3UTR GCA 90 bp CCAAATACTATGCCCCTTTCCCCGAGGCTCAGGCAGGAGGCGGTTCTGATGCTTGGAGGCCAGCCCGGGTaGCCAGGAAGGCCATGTCCA +
Preference number: 4 (lower is better)
Translates to: PNTMPLSPRLRQEAVLMLGGQPG*PGRPCP
Trigger: TGGACATGGCCTTCCTGGGCACCCGGGCTGGCCTCC...AAGCATCAGAACCGCCTCCTGCCTGAGCCTCGGGGAAAGGGGCATAGTATTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585732.1
ENST00000647100.1
CDS-3UTR GCA 90 bp TGTCACCACCGCGTCAAACAGCACCTCCCGGACCAGCTCCTCGTCACACTCCAGAGCCCACGAACAAGCTaGTTCTCAGGAGGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: CHHRVKQHLPDQLLVTLQSPRTS*FSGGQP
Trigger: GGGCTGGCCTCCTGAGAAGCAGCTTGTTCGTGGGCT...CTGGAGTGTGACGAGGAGCTGGTCCGGGAGGTGCTGTTTGACGCGGTGGTGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
CDS-3UTR GCA 90 bp ACGGGGTACTCCGTGTCGCAGGGCTGCAGCGGGTCCTGCTTCTTGTGTTTGTGGAAGCTGCCAGCAGGATaGTCTGAGGCCTGGCGGTAC +
Preference number: 4 (lower is better)
Translates to: TGYSVSQGCSGSCFLCLWKLPAG*SEAWRY
Trigger: GTACCGCCAGGCCTCAGAGCATCCTGCTGGCAGCTT...CCACAAACACAAGAAGCAGGACCCGCTGCAGCCCTGCGACACGGAGTACCCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000646018.1
ENST00000646946.1
CDS-3UTR GCA 90 bp GTGCCAGGTGATTGGTTTCCTGTTCCATCCAGCATTCTCCGGAGCCAGGGGCCAACGGCCCATCCACAGTaGTGCACTGCCGCGTTGCCG +
Preference number: 4 (lower is better)
Translates to: VPGDWFPVPSSILRSQGPTAHPQ*CTAALP
Trigger: CGGCAACGCGGCAGTGCAGCACTGTGGATGGGCCGT...TGGCCCCTGGCTCCGGAGAATGCTGGATGGAACAGGAAACCAATCACCTGGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000382722.10
ENST00000537784.5
ENST00000587995.5
ENST00000644394.1
ENST00000645018.2
ENST00000646946.1
CDS-3UTR GCA 90 bp GAACACGGGGTACTCCGTGTCGCAGGGCTGCAGCGGGTCCTGCTTCTTGTGTTTCCTCGCAGCTCTGTGTaGACGGCCCATCCACAGTGC +
Preference number: 4 (lower is better)
Translates to: EHGVLRVAGLQRVLLLVFPRSSV*TAHPQC
Trigger: GCACTGTGGATGGGCCGTGCACACAGAGCTGCGAGG...AAACACAAGAAGCAGGACCCGCTGCAGCCCTGCGACACGGAGTACCCCGTGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000537923.5
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646946.1
ENST00000647066.1
CDS-3UTR GCA 90 bp GGAATCTGCTGCACCACAAATACCTTCTGGCAGGGCCCGCACTCCACGATCCCGTCCGTGTCGCAGGGCTaGAGCGGGTCCTGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: GICCTTNTFWQGPHSTIPSVSQG*SGSCFL
Trigger: CAAGAAGCAGGACCCGCTGCAGCCCTGCGACACGGA...CGGGATCGTGGAGTGCGGGCCCTGCCAGAAGGTATTTGTGGTGCAGCAGATTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000537923.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
ENST00000647066.1
CDS-3UTR GCA 90 bp AGCTCCTGCAGCAGCCACCTGGTCGCCGTCAAGAAGGCAGAAATTGGGCTGACCTCCGTGTCGCAGGGCTaGAGCGGGTCCTGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: SSCSSHLVAVKKAEIGLTSVSQG*SGSCFL
Trigger: CAAGAAGCAGGACCCGCTGCAGCCCTGCGACACGGA...GGTCAGCCCAATTTCTGCCTTCTTGACGGCGACCAGGTGGCTGCTGCAGGAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000537923.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
ENST00000647066.1
CDS-3UTR GCA 90 bp CTCCGTGTCGCAGGGCTGCAGCGGGTCCTGCTTCTTGTGTTTGTGGGAGTGATGTCCGTGTCGCAGGGCTaGAGCGGGTCCTGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: LRVAGLQRVLLLVFVGVMSVSQG*SGSCFL
Trigger: CAAGAAGCAGGACCCGCTGCAGCCCTGCGACACGGA...CATCACTCCCACAAACACAAGAAGCAGGACCCGCTGCAGCCCTGCGACACGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000537923.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
ENST00000647066.1
CDS-3UTR GCA 90 bp GGTACACGAACACGGGGTACTCCGTGTCGCAGGGCTGCAGCGGGTCCTGCTTCTCTGGTGGGAAGATGCTaGAGTCACAGGTGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: GTRTRGTPCRRAAAGPASLVGRC*SHRWGL
Trigger: CAGACCCCACCTGTGACTGCAGCATCTTCCCACCAG...AGAAGCAGGACCCGCTGCAGCCCTGCGACACGGAGTACCCCGTGTTCGTGTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000537923.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
ENST00000647066.1
CDS-3UTR GCA 90 bp GAGGCTGAGGTGTCCGAGGCGCCGCCGCAGTCCTGGGCATTCTCCTCTGGATGGAGAAAGGCGTATCCGTaGACTCCAAGCTGCCAGAGT +
Preference number: 4 (lower is better)
Translates to: EAEVSEAPPQSWAFSSGWRKAYP*TPSCQS
Trigger: ACTCTGGCAGCTTGGAGTGCACGGATACGCCTTTCT...CCATCCAGAGGAGAATGCCCAGGACTGCGGCGGCGCCTCGGACACCTCAGCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
CDS-3UTR GCA 90 bp GGAATCTGCTGCACCACAAATACCTTCTGGCAGGGCCCGCACTCCACGATCCCGACAAGCACCAGCTCCTaGAGCAGCCACCTGGTCGCC +
Preference number: 4 (lower is better)
Translates to: GICCTTNTFWQGPHSTIPTSTSS*SSHLVA
Trigger: GGCGACCAGGTGGCTGCTGCAGGAGCTGGTGCTTGT...CGGGATCGTGGAGTGCGGGCCCTGCCAGAAGGTATTTGTGGTGCAGCAGATTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537923.5
ENST00000647066.1
CDS-3UTR CCA 90 bp GAGCGTTGGCCTGGGGGCGACCCAACTGCAGTTAGCTGCATCCCATGTCAGTGCTTGTCTTCCGTGCCTTaGCGAGCCTGGGGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: ERWPGGDPTAVSCIPCQCLSSVP*RAWGLQ
Trigger: CTGGAGACCCCAGGCTCGCCAAGGCACGGAAGACAA...GCACTGACATGGGATGCAGCTAACTGCAGTTGGGTCGCCCCCAGGCCAACGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000645018.2
ENST00000646018.1
CDS-3UTR CCA 90 bp TGCAGCAGCCACCTGGTCGCCGTCAAGAAGGCAGAAATTGGGCTGACCAGGGGCGAATCCAGCGGCTGCTaGAGCTGGGGTTTGCGAGGA +
Preference number: 4 (lower is better)
Translates to: CSSHLVAVKKAEIGLTRGESSGC*SWGLRG
Trigger: TCCTCGCAAACCCCAGCTCCAGCAGCCGCTGGATTC...GCCCCTGGTCAGCCCAATTTCTGCCTTCTTGACGGCGACCAGGTGGCTGCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
CDS-3UTR CCA 90 bp CCTGGGCATTCTCCTCTGGATGGAAGGCGTGGCAGGAGTCTGGTCGCCGGCGGACTTTGTTGTACACGTTaGTGGGCAGCTGCACGCTGC +
Preference number: 4 (lower is better)
Translates to: PGHSPLDGRRGRSLVAGGLCCTR*WAAARC
Trigger: GCAGCGTGCAGCTGCCCACCAACGTGTACAACAAAG...TCCGCCGGCGACCAGACTCCTGCCACGCCTTCCATCCAGAGGAGAATGCCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
CDS-3UTR CCA 90 bp TTCTGGCAGGGCCCGCACTCCACGATCCCGTTGGCCTCCCGGATGGCCGGCTGGAACGTTGGGTCTCTCTaGAAGTTCTCCACGAAGACA +
Preference number: 4 (lower is better)
Translates to: FWQGPHSTIPLASRMAGWNVGSL*KFSTKT
Trigger: TGTCTTCGTGGAGAACTTCCAGAGAGACCCAACGTT...CCAGCCGGCCATCCGGGAGGCCAACGGGATCGTGGAGTGCGGGCCCTGCCAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
CDS-3UTR CCA 90 bp GGCCCGCACTCCACGATCCCGTTGGCCTCCCGGATGGCCGGCTGGTACACGAACAGAGGCTTCCTTGCTTaGCCTCTTGGAACTGCTTCA +
Preference number: 4 (lower is better)
Translates to: GPHSTIPLASRMAGWYTNRGFLA*PLGTAS
Trigger: TGAAGCAGTTCCAAGAGGCCAAGCAAGGAAGCCTCT...GTTCGTGTACCAGCCGGCCATCCGGGAGGCCAACGGGATCGTGGAGTGCGGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
CDS-3UTR CCA 90 bp GAGCGTTGGCCTGGGGGCGACCCAACTGCAGTTAGCTGCATCCCATGTCAGTGCAGGATGTATTCTCCGTaGCCCCGGGACAGCACCACC +
Preference number: 4 (lower is better)
Translates to: ERWPGGDPTAVSCIPCQCRMYSP*PRDSTT
Trigger: GGTGGTGCTGTCCCGGGGCCACGGAGAATACATCCT...GCACTGACATGGGATGCAGCTAACTGCAGTTGGGTCGCCCCCAGGCCAACGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000587995.5
ENST00000644394.1
ENST00000645018.2
ENST00000646018.1
CDS-3UTR CCA 90 bp TTCTGGCAGGGCCCGCACTCCACGATCCCGTTGGCCTCCCGGATGGCCGGCTGGGCCCAGAATTTGCGCTaGAGGAATTCCAGCTTCATT +
Preference number: 4 (lower is better)
Translates to: FWQGPHSTIPLASRMAGWAQNLR*RNSSFI
Trigger: AATGAAGCTGGAATTCCTCCAGCGCAAATTCTGGGC...CCAGCCGGCCATCCGGGAGGCCAACGGGATCGTGGAGTGCGGGCCCTGCCAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000537784.5
ENST00000537923.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646498.1
ENST00000646946.1
ENST00000647066.1
CDS-3UTR CCA 90 bp CTGGCAGGGCCCGCACTCCACGATCCCGTTGGCCTCCCGGATGGCCGGCTGGTAGCCCAGAATTTGCGCTaGAGGAATTCCAGCTTCATT +
Preference number: 4 (lower is better)
Translates to: LAGPALHDPVGLPDGRLVAQNLR*RNSSFI
Trigger: AATGAAGCTGGAATTCCTCCAGCGCAAATTCTGGGC...TACCAGCCGGCCATCCGGGAGGCCAACGGGATCGTGGAGTGCGGGCCCTGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000537784.5
ENST00000537923.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646498.1
ENST00000646946.1
ENST00000647066.1
CDS-3UTR CCA 90 bp ACACGGGGTACTCCGTGTCGCAGGGCTGCAGCGGGTCCTGCTTCTTGTGTTTGTCCTGCAGCAGCCACCTaGTCGCCGTCAAGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: TRGTPCRRAAAGPASCVCPAAAT*SPSRRQ
Trigger: CTGCCTTCTTGACGGCGACCAGGTGGCTGCTGCAGG...ACAAACACAAGAAGCAGGACCCGCTGCAGCCCTGCGACACGGAGTACCCCGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000537923.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
ENST00000647066.1
CDS-3UTR CCA 90 bp CTCCTGCAGCAGCCACCTGGTCGCCGTCAAGAAGGCAGAAATTGGGCTGACCAGTCCCGGATGGCCGGCTaGTACACGAACACGGGGTAC +
Preference number: 4 (lower is better)
Translates to: LLQQPPGRRQEGRNWADQSRMAG*YTNTGY
Trigger: GTACCCCGTGTTCGTGTACCAGCCGGCCATCCGGGA...CTGGTCAGCCCAATTTCTGCCTTCTTGACGGCGACCAGGTGGCTGCTGCAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000537923.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
ENST00000647066.1
CDS-3UTR CCA 90 bp CAGGTGATTGGTTTCCTGTTCCATCCAGCATTCTCCGGAGCCAGGGGCCACCAGCGCCGGCGGAGCTTCTaGGAGCGCATCCGGTCACAT +
Preference number: 4 (lower is better)
Translates to: QVIGFLFHPAFSGARGHQRRRSF*ERIRSH
Trigger: ATGTGACCGGATGCGCTCCCAGAAGCTCCGCCGGCG...CTGGTGGCCCCTGGCTCCGGAGAATGCTGGATGGAACAGGAAACCAATCACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000587995.5
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR CCA 90 bp CAGGTGATTGGTTTCCTGTTCCATCCAGCATTCTCCGGAGCCAGGGGCCACCAGGCGCCGCCGCAGTCCTaGGCATTCTCCTCTGGATGG +
Preference number: 4 (lower is better)
Translates to: QVIGFLFHPAFSGARGHQAPPQS*AFSSGW
Trigger: CCATCCAGAGGAGAATGCCCAGGACTGCGGCGGCGC...CTGGTGGCCCCTGGCTCCGGAGAATGCTGGATGGAACAGGAAACCAATCACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000587995.5
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR CCA 90 bp ACACGGGGTACTCCGTGTCGCAGGGCTGCAGCGGGTCCTGCTTCTTGTGTTTGTTGTCACCGCAGGAGTTaGGGCAGTAGCCCCCAGGCA +
Preference number: 4 (lower is better)
Translates to: TRGTPCRRAAAGPASCVCCHRRS*GSSPQA
Trigger: TGCCTGGGGGCTACTGCCCCAACTCCTGCGGTGACA...ACAAACACAAGAAGCAGGACCCGCTGCAGCCCTGCGACACGGAGTACCCCGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR CCA 90 bp TGGTACACGAACACGGGGTACTCCGTGTCGCAGGGCTGCAGCGGGTCCTGCTTCAAACACAGGTCAGGCTaGGTGGTGTCACCGCAGGAG +
Preference number: 4 (lower is better)
Translates to: WYTNTGYSVSQGCSGSCFKHRSG*VVSPQE
Trigger: CTCCTGCGGTGACACCACCCAGCCTGACCTGTGTTT...GAAGCAGGACCCGCTGCAGCCCTGCGACACGGAGTACCCCGTGTTCGTGTACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR CCA 90 bp GTGGGAGTGATGGAAGACACTTTTGGCCTCGGCCCCTCTGTCGTACCAGGAGCCAGAGGAGCGTTGGCCTaGGGGCGACCCAACTGCAGT +
Preference number: 4 (lower is better)
Translates to: VGVMEDTFGLGPSVVPGARGALA*GRPNCS
Trigger: ACTGCAGTTGGGTCGCCCCCAGGCCAACGCTCCTCT...GGCTCCTGGTACGACAGAGGGGCCGAGGCCAAAAGTGTCTTCCATCACTCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR CCA 90 bp AGGAGCGTTGGCCTGGGGGCGACCCAACTGCAGTTAGCTGCATCCCATGTCAGTAGAGGAGCGTTGGCCTaGGGGCGACCCAACTGCAGT +
Preference number: 4 (lower is better)
Translates to: RSVGLGATQLQLAASHVSRGALA*GRPNCS
Trigger: ACTGCAGTTGGGTCGCCCCCAGGCCAACGCTCCTCT...ACTGACATGGGATGCAGCTAACTGCAGTTGGGTCGCCCCCAGGCCAACGCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000585385.5
ENST00000587995.5
ENST00000642253.1
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR CCA 90 bp TCCACGATCCCGTTGGCCTCCCGGATGGCCGGCTGGTACACGAACACGGGGTACAAGCTGAGCTCACGCTaGCTTCCCGAAGAGGAGACA +
Preference number: 4 (lower is better)
Translates to: STIPLASRMAGWYTNTGYKLSSR*LPEEET
Trigger: TGTCTCCTCTTCGGGAAGCCAGCGTGAGCTCAGCTT...GTACCCCGTGTTCGTGTACCAGCCGGCCATCCGGGAGGCCAACGGGATCGTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR CCA 90 bp GTTGGCCTGGGGGCGACCCAACTGCAGTTAGCTGCATCCCATGTCAGTGCTGACCCAGGTCTTGGGGTTTaGTCGGGGGAGGAAGCTGCG +
Preference number: 4 (lower is better)
Translates to: VGLGATQLQLAASHVSADPGLGV*SGEEAA
Trigger: CGCAGCTTCCTCCCCCGACCAAACCCCAAGACCTGG...GTCAGCACTGACATGGGATGCAGCTAACTGCAGTTGGGTCGCCCCCAGGCCAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000382722.10
ENST00000537784.5
ENST00000645018.2
ENST00000646946.1
CDS-3UTR CCA 90 bp GATCCCGTTGGCCTCCCGGATGGCCGGCTGGTACACGAACACGGGGTACTCCGTAATTCCAGCTTCATTTaGACGCCCGCGGCTACAGGG +
Preference number: 4 (lower is better)
Translates to: DPVGLPDGRLVHEHGVLRNSSFI*TPAATG
Trigger: CCCTGTAGCCGCGGGCGTCCAAATGAAGCTGGAATT...ACGGAGTACCCCGTGTTCGTGTACCAGCCGGCCATCCGGGAGGCCAACGGGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537923.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646498.1
ENST00000647066.1
CDS-3UTR TCA 90 bp TGGCCTCCCGGATGGCCGGCTGGTACACGAACACGGGGTACTCCGTGTCGCAGGACACCAGGGATTCATTaGATTCGTGGTTCAGGTCGG +
Preference number: 4 (lower is better)
Translates to: WPPGWPAGTRTRGTPCRRTPGIH*IRGSGR
Trigger: CCGACCTGAACCACGAATTCAATGAATCCCTGGTGT...CCTGCGACACGGAGTACCCCGTGTTCGTGTACCAGCCGGCCATCCGGGAGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
CDS-3UTR TCA 90 bp GGCCCATCCACAGTGCTGCACTGCAGCAATGGCTGTCCTCTTGTCCACGGTCACCTGGGTCCTTCCTGGTaGGGAAGCGGATCATGGCCT +
Preference number: 4 (lower is better)
Translates to: GPSTVLHCSNGCPLVHGHLGPSW*GSGSWP
Trigger: AGGCCATGATCCGCTTCCTCACCAGGAAGGACCCAG...GTGACCGTGGACAAGAGGACAGCCATTGCTGCAGTGCAGCACTGTGGATGGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
CDS-3UTR TCA 90 bp AGCTCCTGCAGCAGCCACCTGGTCGCCGTCAAGAAGGCAGAAATTGGGCTGACCACTCCTCGGACATGTTaGGGGCCAGCGCTGTCCAGT +
Preference number: 4 (lower is better)
Translates to: SSCSSHLVAVKKAEIGLTTPRTC*GPALSS
Trigger: ACTGGACAGCGCTGGCCCTCAACATGTCCGAGGAGT...GGTCAGCCCAATTTCTGCCTTCTTGACGGCGACCAGGTGGCTGCTGCAGGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000646018.1
ENST00000646946.1
CDS-3UTR TCA 90 bp TCACCTTGCCAAAACACAGGTCAGGCTGGGTGGTGTCACCGCAGGAGTTGGGGCACTCCTCGGACATGTTaGGGGCCAGCGCTGTCCAGT +
Preference number: 4 (lower is better)
Translates to: SPCQNTGQAGWCHRRSWGTPRTC*GPALSS
Trigger: ACTGGACAGCGCTGGCCCTCAACATGTCCGAGGAGT...GCCCCAACTCCTGCGGTGACACCACCCAGCCTGACCTGTGTTTTGGCAAGGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000646018.1
ENST00000646946.1
CDS-3UTR TCA 90 bp GTTGGCCTGGGGGCGACCCAACTGCAGTTAGCTGCATCCCATGTCAGTGCTGACACTCCTCGGACATGTTaGGGGCCAGCGCTGTCCAGT +
Preference number: 4 (lower is better)
Translates to: VGLGATQLQLAASHVSADTPRTC*GPALSS
Trigger: ACTGGACAGCGCTGGCCCTCAACATGTCCGAGGAGT...GTCAGCACTGACATGGGATGCAGCTAACTGCAGTTGGGTCGCCCCCAGGCCAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000587995.5
ENST00000644394.1
ENST00000645018.2
ENST00000646018.1
ENST00000646946.1
CDS-3UTR TCA 90 bp AGCTCACACAGAACCAAATACTATGCCCCTTTCCCCGAGGCTCAGGCAGGAGGCGGAAGCGGTCCAGGGTaGACACGCTGGCCTCGTCCT +
Preference number: 4 (lower is better)
Translates to: SSHRTKYYAPFPEAQAGGGSGPG*TRWPRP
Trigger: AGGACGAGGCCAGCGTGTTCACCCTGGACCGCTTCC...GCCTCCTGCCTGAGCCTCGGGGAAAGGGGCATAGTATTTGGTTCTGTGTGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585732.1
ENST00000647100.1
CDS-3UTR TCA 90 bp CGAACACGGGGTACTCCGTGTCGCAGGGCTGCAGCGGGTCCTGCTTCTTGTGTTGCTGCACTGTGGTGGTaGCTCGAGGGTTTGCACATG +
Preference number: 4 (lower is better)
Translates to: RTRGTPCRRAAAGPASCVAALWW*LEGLHM
Trigger: CATGTGCAAACCCTCGAGTCACCACCACAGTGCAGC...AACACAAGAAGCAGGACCCGCTGCAGCCCTGCGACACGGAGTACCCCGTGTTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000537923.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
ENST00000647066.1
CDS-3UTR TCA 90 bp CTGCAGCAGCCACCTGGTCGCCGTCAAGAAGGCAGAAATTGGGCTGACCAGGGGGCTGCACTGTGGTGGTaGCTCGAGGGTTTGCACATG +
Preference number: 4 (lower is better)
Translates to: LQQPPGRRQEGRNWADQGAALWW*LEGLHM
Trigger: CATGTGCAAACCCTCGAGTCACCACCACAGTGCAGC...CCCCTGGTCAGCCCAATTTCTGCCTTCTTGACGGCGACCAGGTGGCTGCTGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000537923.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
ENST00000647066.1
CDS-3UTR TCA 90 bp GCTGCACCACAAATACCTTCTGGCAGGGCCCGCACTCCACGATCCCGTTGGCCTGCTGCACTGTGGTGGTaGCTCGAGGGTTTGCACATG +
Preference number: 4 (lower is better)
Translates to: AAPQIPSGRARTPRSRWPAALWW*LEGLHM
Trigger: CATGTGCAAACCCTCGAGTCACCACCACAGTGCAGC...AGGCCAACGGGATCGTGGAGTGCGGGCCCTGCCAGAAGGTATTTGTGGTGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000537923.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
ENST00000647066.1
CDS-3UTR TCA 90 bp GGCCTCCCGGATGGCCGGCTGGTACACGAACACGGGGTACTCCGTGTCGCAGGGCAGAGGCATTATATTTaGCTTCTGTCGCCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: GLPDGRLVHEHGVLRVAGQRHYI*LLSPPA
Trigger: TGCAGGAGGCGACAGAAGTCAAATATAATGCCTCTG...CCCTGCGACACGGAGTACCCCGTGTTCGTGTACCAGCCGGCCATCCGGGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR TCA 90 bp GGCCCGCACTCCACGATCCCGTTGGCCTCCCGGATGGCCGGCTGGTACACGAACGAAGTATGCTCATGTTaGGACCTAGGGCAGATGGTA +
Preference number: 4 (lower is better)
Translates to: GPHSTIPLASRMAGWYTNEVCSC*DLGQMV
Trigger: TACCATCTGCCCTAGGTCTCAACATGAGCATACTTC...GTTCGTGTACCAGCCGGCCATCCGGGAGGCCAACGGGATCGTGGAGTGCGGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR TCA 90 bp TCAAACAGCACCTCCCGGACCAGCTCCTCGTCACACTCCAGGTCTGGGTCCTTCTGTCTTGGTCCAAGCTaGGCTCACGCTGGCTTCCCG +
Preference number: 4 (lower is better)
Translates to: SNSTSRTSSSSHSRSGSFCLGPS*AHAGFP
Trigger: CGGGAAGCCAGCGTGAGCTCAGCTTGGACCAAGACA...GAAGGACCCAGACCTGGAGTGTGACGAGGAGCTGGTCCGGGAGGTGCTGTTTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
CDS-3UTR TCA 90 bp TGCACCACAAATACCTTCTGGCAGGGCCCGCACTCCACGATCCCGTTGGCCTCCAGTGGCCTCCCACCATaGGCCTCACTTTGGGGAATC +
Preference number: 4 (lower is better)
Translates to: CTTNTFWQGPHSTIPLASSGLPP*ASLWGI
Trigger: GATTCCCCAAAGTGAGGCTCATGGTGGGAGGCCACT...GGAGGCCAACGGGATCGTGGAGTGCGGGCCCTGCCAGAAGGTATTTGTGGTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR GCA 90 bp CTCTGTGTGCACGGCCCATCCACAGTGCTGCACTGCAGCAATGGCTGTCCTCTTGGGGAATCCAGCGGCTaGTGGAGCTGGGGTTTGCGA +
Preference number: 4 (lower is better)
Translates to: LCVHGPSTVLHCSNGCPLGESSG*WSWGLR
Trigger: TCGCAAACCCCAGCTCCAGCAGCCGCTGGATTCCCC...AAGAGGACAGCCATTGCTGCAGTGCAGCACTGTGGATGGGCCGTGCACACAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
CDS-3UTR GCA 90 bp GGAATCTGCTGCACCACAAATACCTTCTGGCAGGGCCCGCACTCCACGATCCCGAGCCCACGAACAAGCTaGTTCTCAGGAGGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: GICCTTNTFWQGPHSTIPSPRTS*FSGGQP
Trigger: GGGCTGGCCTCCTGAGAAGCAGCTTGTTCGTGGGCT...CGGGATCGTGGAGTGCGGGCCCTGCCAGAAGGTATTTGTGGTGCAGCAGATTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000646018.1
ENST00000646946.1
CDS-3UTR GCA 90 bp TACTATGCCCCTTTCCCCGAGGCTCAGGCAGGAGGCGGTTCTGATGCTTCTGCCAGCCCACGAACAAGCTaGTTCTCAGGAGGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: YYAPFPEAQAGGGSDASASPRTS*FSGGQP
Trigger: GGGCTGGCCTCCTGAGAAGCAGCTTGTTCGTGGGCT...GGCAGAAGCATCAGAACCGCCTCCTGCCTGAGCCTCGGGGAAAGGGGCATAGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585732.1
ENST00000647100.1
CDS-3UTR GCA 90 bp AGGAGCGTTGGCCTGGGGGCGACCCAACTGCAGTTAGCTGCATCCCATGTCAGTTCACCGCCACAGCTGTaGTTGCCGTCACCACCATGG +
Preference number: 4 (lower is better)
Translates to: RSVGLGATQLQLAASHVSSPPQL*LPSPPW
Trigger: CCATGGTGGTGACGGCAAGCACAGCTGTGGCGGTGA...ACTGACATGGGATGCAGCTAACTGCAGTTGGGTCGCCCCCAGGCCAACGCTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000587995.5
ENST00000644394.1
ENST00000645018.2
ENST00000646018.1
ENST00000646946.1
CDS-3UTR GCA 90 bp CAGGTGATTGGTTTCCTGTTCCATCCAGCATTCTCCGGAGCCAGGGGCCACCAGGCTGCACTGCCGCGTTaGCGCCCAGAATTTGCGCTG +
Preference number: 4 (lower is better)
Translates to: QVIGFLFHPAFSGARGHQAALPR*RPEFAL
Trigger: CAGCGCAAATTCTGGGCGGCAACGCGGCAGTGCAGC...CTGGTGGCCCCTGGCTCCGGAGAATGCTGGATGGAACAGGAAACCAATCACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000382722.10
ENST00000537784.5
ENST00000587995.5
ENST00000644394.1
ENST00000645018.2
ENST00000646946.1
CDS-3UTR GCA 90 bp TGGGATGGCTCTGGAAGGATCACCTTGCCAAAACACAGGTCAGGCTGGGTGGTGACGGCCCATCCACAGTaGTGCACTGCCGCGTTGCCG +
Preference number: 4 (lower is better)
Translates to: WDGSGRITLPKHRSGWVVTAHPQ*CTAALP
Trigger: CGGCAACGCGGCAGTGCAGCACTGTGGATGGGCCGT...CACCACCCAGCCTGACCTGTGTTTTGGCAAGGTGATCCTTCCAGAGCCATCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000382722.10
ENST00000537784.5
ENST00000585385.5
ENST00000587995.5
ENST00000588077.5
ENST00000642253.1
ENST00000644394.1
ENST00000645018.2
ENST00000645225.1
ENST00000646946.1
CDS-3UTR GCA 90 bp CACACAGAACCAAATACTATGCCCCTTTCCCCGAGGCTCAGGCAGGAGGCGGTTACGGCCCATCCACAGTaGTGCACTGCCGCGTTGCCG +
Preference number: 4 (lower is better)
Translates to: HTEPNTMPLSPRLRQEAVTAHPQ*CTAALP
Trigger: CGGCAACGCGGCAGTGCAGCACTGTGGATGGGCCGT...AACCGCCTCCTGCCTGAGCCTCGGGGAAAGGGGCATAGTATTTGGTTCTGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585732.1
ENST00000647100.1
CDS-3UTR GCA 90 bp CATTCTCCTCTGGATGGAAGGCGTGGCAGGAGTCTGGTCGCCGGCGGAGCTTCTGGCTGCAGCGGGTCCTaGTTCTTGTGTTTGTGGGAG +
Preference number: 4 (lower is better)
Translates to: HSPLDGRRGRSLVAGGASGCSGS*FLCLWE
Trigger: CTCCCACAAACACAAGAAGCAGGACCCGCTGCAGCC...AGAAGCTCCGCCGGCGACCAGACTCCTGCCACGCCTTCCATCCAGAGGAGAATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR GCA 90 bp GGGGTACTCCGTGTCGCAGGGCTGCAGCGGGTCCTGCTTCTTGTGTTTGTGGGAGGCTGCAGCGGGTCCTaGTTCTTGTGTTTGTGGGAG +
Preference number: 4 (lower is better)
Translates to: GVLRVAGLQRVLLLVFVGGCSGS*FLCLWE
Trigger: CTCCCACAAACACAAGAAGCAGGACCCGCTGCAGCC...TCCCACAAACACAAGAAGCAGGACCCGCTGCAGCCCTGCGACACGGAGTACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000537923.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
ENST00000647066.1
CDS-3UTR GCA 90 bp GGCCCGCACTCCACGATCCCGTTGGCCTCCCGGATGGCCGGCTGGTACACGAACCTGTTGGGAATCTGCTaGACCACAAATACCTTCTGG +
Preference number: 4 (lower is better)
Translates to: GPHSTIPLASRMAGWYTNLLGIC*TTNTFW
Trigger: CCAGAAGGTATTTGTGGTGCAGCAGATTCCCAACAG...GTTCGTGTACCAGCCGGCCATCCGGGAGGCCAACGGGATCGTGGAGTGCGGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000537923.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
ENST00000647066.1
CDS-3UTR GCA 90 bp ACGGGGTACTCCGTGTCGCAGGGCTGCAGCGGGTCCTGCTTCTTGTGTTTGTGGCTGGTGGGAAGATGCTaGAGTCACAGGTGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: TGYSVSQGCSGSCFLCLWLVGRC*SHRWGL
Trigger: CAGACCCCACCTGTGACTGCAGCATCTTCCCACCAG...CCACAAACACAAGAAGCAGGACCCGCTGCAGCCCTGCGACACGGAGTACCCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000537923.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
ENST00000647066.1
CDS-3UTR GCA 90 bp TGCACCACAAATACCTTCTGGCAGGGCCCGCACTCCACGATCCCGTTGGCCTCCCTGGTGGGAAGATGCTaGAGTCACAGGTGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: CTTNTFWQGPHSTIPLASLVGRC*SHRWGL
Trigger: CAGACCCCACCTGTGACTGCAGCATCTTCCCACCAG...GGAGGCCAACGGGATCGTGGAGTGCGGGCCCTGCCAGAAGGTATTTGTGGTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000537923.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
ENST00000647066.1
CDS-3UTR GCA 90 bp TGCTGCACCACAAATACCTTCTGGCAGGGCCCGCACTCCACGATCCCGTTGGCCCTGGTGGGAAGATGCTaGAGTCACAGGTGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: CCTTNTFWQGPHSTIPLALVGRC*SHRWGL
Trigger: CAGACCCCACCTGTGACTGCAGCATCTTCCCACCAG...GGCCAACGGGATCGTGGAGTGCGGGCCCTGCCAGAAGGTATTTGTGGTGCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000537923.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
ENST00000647066.1
CDS-3UTR GCA 90 bp GAGGCTGAGGTGTCCGAGGCGCCGCCGCAGTCCTGGGCATTCTCCTCTGGATGGGCCTCATTCTGCTGCTaGTTCTCAGTACCCAGAAGT +
Preference number: 4 (lower is better)
Translates to: EAEVSEAPPQSWAFSSGWASFCC*FSVPRS
Trigger: ACTTCTGGGTACTGAGAAGCAGCAGCAGAATGAGGC...CCATCCAGAGGAGAATGCCCAGGACTGCGGCGGCGCCTCGGACACCTCAGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR GCA 90 bp TGGCCTCCCGGATGGCCGGCTGGTACACGAACACGGGGTACTCCGTGTCGCAGGGCCTCATTCTGCTGCTaGTTCTCAGTACCCAGAAGT +
Preference number: 4 (lower is better)
Translates to: WPPGWPAGTRTRGTPCRRASFCC*FSVPRS
Trigger: ACTTCTGGGTACTGAGAAGCAGCAGCAGAATGAGGC...CCTGCGACACGGAGTACCCCGTGTTCGTGTACCAGCCGGCCATCCGGGAGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR GCA 90 bp GTTGGCCTGGGGGCGACCCAACTGCAGTTAGCTGCATCCCATGTCAGTGCTGACTGGGGGAGATGTGTGTaGGCTGGGGGTGAGTTCCCA +
Preference number: 4 (lower is better)
Translates to: VGLGATQLQLAASHVSADWGRCV*AGGEFP
Trigger: TGGGAACTCACCCCCAGCGCACACACATCTCCCCCA...GTCAGCACTGACATGGGATGCAGCTAACTGCAGTTGGGTCGCCCCCAGGCCAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000382722.10
ENST00000537784.5
ENST00000645018.2
ENST00000646946.1
CDS-3UTR GCA 90 bp GGGCATTCTCCTCTGGATGGAAGGCGTGGCAGGAGTCTGGTCGCCGGCGGAGCTAGAAAGGCGTATCCGTaGACTCCAAGCTGCCAGAGT +
Preference number: 4 (lower is better)
Translates to: GHSPLDGRRGRSLVAGGARKAYP*TPSCQS
Trigger: ACTCTGGCAGCTTGGAGTGCACGGATACGCCTTTCT...AGCTCCGCCGGCGACCAGACTCCTGCCACGCCTTCCATCCAGAGGAGAATGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
CDS-3UTR CCA 90 bp ACAAATACCTTCTGGCAGGGCCCGCACTCCACGATCCCGTTGGCCTCCCGGATGTTTCCAGAGGAATCTTaGCCTGTCCCCACGCAGGGG +
Preference number: 4 (lower is better)
Translates to: TNTFWQGPHSTIPLASRMFPEES*PVPTQG
Trigger: CCCCTGCGTGGGGACAGGCCAAGATTCCTCTGGAAA...CATCCGGGAGGCCAACGGGATCGTGGAGTGCGGGCCCTGCCAGAAGGTATTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
CDS-3UTR CCA 90 bp GAGCGTTGGCCTGGGGGCGACCCAACTGCAGTTAGCTGCATCCCATGTCAGTGCTTTCCAGAGGAATCTTaGCCTGTCCCCACGCAGGGG +
Preference number: 4 (lower is better)
Translates to: ERWPGGDPTAVSCIPCQCFPEES*PVPTQG
Trigger: CCCCTGCGTGGGGACAGGCCAAGATTCCTCTGGAAA...GCACTGACATGGGATGCAGCTAACTGCAGTTGGGTCGCCCCCAGGCCAACGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000587995.5
ENST00000644394.1
ENST00000645018.2
ENST00000646018.1
CDS-3UTR CCA 90 bp CGGGGTACTCCGTGTCGCAGGGCTGCAGCGGGTCCTGCTTCTTGTGTTTGTGGGATGATGTCGTGGTCGTaGTTGATGACCATGGGGCGG +
Preference number: 4 (lower is better)
Translates to: RGTPCRRAAAGPASCVCGMMSWS*LMTMGR
Trigger: CCGCCCCATGGTCATCAACCACGACCACGACATCAT...CCCACAAACACAAGAAGCAGGACCCGCTGCAGCCCTGCGACACGGAGTACCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
CDS-3UTR CCA 90 bp TGCTGCACCACAAATACCTTCTGGCAGGGCCCGCACTCCACGATCCCGTTGGCCCAAGAAGGCAGAAATTaGGCTGACCAGGGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: CCTTNTFWQGPHSTIPLAQEGRN*ADQGLG
Trigger: GCCCAGCCCCTGGTCAGCCCAATTTCTGCCTTCTTG...GGCCAACGGGATCGTGGAGTGCGGGCCCTGCCAGAAGGTATTTGTGGTGCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000537923.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
ENST00000647066.1
CDS-3UTR CCA 90 bp ATTCTCCTCTGGATGGAAGGCGTGGCAGGAGTCTGGTCGCCGGCGGAGCTTCTGCAAGAAGGCAGAAATTaGGCTGACCAGGGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: ILLWMEGVAGVWSPAELLQEGRN*ADQGLG
Trigger: GCCCAGCCCCTGGTCAGCCCAATTTCTGCCTTCTTG...CAGAAGCTCCGCCGGCGACCAGACTCCTGCCACGCCTTCCATCCAGAGGAGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR CCA 90 bp GTGCCAGGTGATTGGTTTCCTGTTCCATCCAGCATTCTCCGGAGCCAGGGGCCATCCCGGATGGCCGGCTaGTACACGAACACGGGGTAC +
Preference number: 4 (lower is better)
Translates to: VPGDWFPVPSSILRSQGPSRMAG*YTNTGY
Trigger: GTACCCCGTGTTCGTGTACCAGCCGGCCATCCGGGA...TGGCCCCTGGCTCCGGAGAATGCTGGATGGAACAGGAAACCAATCACCTGGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000587995.5
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR CCA 90 bp ATCTGCTGCACCACAAATACCTTCTGGCAGGGCCCGCACTCCACGATCCCGTTGCGTTGGCCTCCCGGATaGCCGGCTGGTACACGAACA +
Preference number: 4 (lower is better)
Translates to: ICCTTNTFWQGPHSTIPLRWPPG*PAGTRT
Trigger: TGTTCGTGTACCAGCCGGCCATCCGGGAGGCCAACG...CAACGGGATCGTGGAGTGCGGGCCCTGCCAGAAGGTATTTGTGGTGCAGCAGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000537923.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
ENST00000647066.1
CDS-3UTR CCA 90 bp GCTGCACCACAAATACCTTCTGGCAGGGCCCGCACTCCACGATCCCGTTGGCCTACCACAAATACCTTCTaGCAGGGCCCGCACTCCACG +
Preference number: 4 (lower is better)
Translates to: AAPQIPSGRARTPRSRWPTTNTF*QGPHST
Trigger: CGTGGAGTGCGGGCCCTGCCAGAAGGTATTTGTGGT...AGGCCAACGGGATCGTGGAGTGCGGGCCCTGCCAGAAGGTATTTGTGGTGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000537923.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
ENST00000647066.1
CDS-3UTR CCA 90 bp CCCGTTGGCCTCCCGGATGGCCGGCTGGTACACGAACACGGGGTACTCCGTGTCGGAGGAGGTTACTGTTaGGAATCTGCTGCACCACAA +
Preference number: 4 (lower is better)
Translates to: PVGLPDGRLVHEHGVLRVGGGYC*ESAAPQ
Trigger: TTGTGGTGCAGCAGATTCCCAACAGTAACCTCCTCC...GACACGGAGTACCCCGTGTTCGTGTACCAGCCGGCCATCCGGGAGGCCAACGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000537923.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
ENST00000647066.1
CDS-3UTR CCA 90 bp CGTTGGCCTCCCGGATGGCCGGCTGGTACACGAACACGGGGTACTCCGTGTCGCGGAGGAGGTTACTGTTaGGAATCTGCTGCACCACAA +
Preference number: 4 (lower is better)
Translates to: RWPPGWPAGTRTRGTPCRGGGYC*ESAAPQ
Trigger: TTGTGGTGCAGCAGATTCCCAACAGTAACCTCCTCC...GCGACACGGAGTACCCCGTGTTCGTGTACCAGCCGGCCATCCGGGAGGCCAACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000537923.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
ENST00000647066.1
CDS-3UTR CCA 90 bp GGGGTACTCCGTGTCGCAGGGCTGCAGCGGGTCCTGCTTCTTGTGTTTGTGGGACTGGGCATTCTCCTCTaGATGGAAGGCGTGGCAGGA +
Preference number: 4 (lower is better)
Translates to: GVLRVAGLQRVLLLVFVGLGILL*MEGVAG
Trigger: TCCTGCCACGCCTTCCATCCAGAGGAGAATGCCCAG...TCCCACAAACACAAGAAGCAGGACCCGCTGCAGCCCTGCGACACGGAGTACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR CCA 90 bp GAGCGTTGGCCTGGGGGCGACCCAACTGCAGTTAGCTGCATCCCATGTCAGTGCCTGGGCATTCTCCTCTaGATGGAAGGCGTGGCAGGA +
Preference number: 4 (lower is better)
Translates to: ERWPGGDPTAVSCIPCQCLGILL*MEGVAG
Trigger: TCCTGCCACGCCTTCCATCCAGAGGAGAATGCCCAG...GCACTGACATGGGATGCAGCTAACTGCAGTTGGGTCGCCCCCAGGCCAACGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000585385.5
ENST00000587995.5
ENST00000642253.1
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR CCA 90 bp TGGGATGGCTCTGGAAGGATCACCTTGCCAAAACACAGGTCAGGCTGGGTGGTGGCGCCGCCGCAGTCCTaGGCATTCTCCTCTGGATGG +
Preference number: 4 (lower is better)
Translates to: WDGSGRITLPKHRSGWVVAPPQS*AFSSGW
Trigger: CCATCCAGAGGAGAATGCCCAGGACTGCGGCGGCGC...CACCACCCAGCCTGACCTGTGTTTTGGCAAGGTGATCCTTCCAGAGCCATCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000585385.5
ENST00000587995.5
ENST00000588077.5
ENST00000642253.1
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000645225.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR CCA 90 bp ATTCTCCTCTGGATGGAAGGCGTGGCAGGAGTCTGGTCGCCGGCGGAGCTTCTGAAACACAGGTCAGGCTaGGTGGTGTCACCGCAGGAG +
Preference number: 4 (lower is better)
Translates to: ILLWMEGVAGVWSPAELLKHRSG*VVSPQE
Trigger: CTCCTGCGGTGACACCACCCAGCCTGACCTGTGTTT...CAGAAGCTCCGCCGGCGACCAGACTCCTGCCACGCCTTCCATCCAGAGGAGAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR CCA 90 bp TCCACGATCCCGTTGGCCTCCCGGATGGCCGGCTGGTACACGAACACGGGGTACGTGGTGCCAGGTGATTaGTTTCCTGTTCCATCCAGC +
Preference number: 4 (lower is better)
Translates to: STIPLASRMAGWYTNTGYVVPGD*FPVPSS
Trigger: GCTGGATGGAACAGGAAACCAATCACCTGGCACCAC...GTACCCCGTGTTCGTGTACCAGCCGGCCATCCGGGAGGCCAACGGGATCGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR CCA 90 bp GGCCTCCCGGATGGCCGGCTGGTACACGAACACGGGGTACTCCGTGTCGCAGGGGCTGGGTCTGGACTCTaGAGTACAGGAAGAACTAAA +
Preference number: 4 (lower is better)
Translates to: GLPDGRLVHEHGVLRVAGAGSGL*STGRTK
Trigger: TTTAGTTCTTCCTGTACTCCAGAGTCCAGACCCAGC...CCCTGCGACACGGAGTACCCCGTGTTCGTGTACCAGCCGGCCATCCGGGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR CCA 90 bp GGTGTCCGAGGCGCCGCCGCAGTCCTGGGCATTCTCCTCTGGATGGAAGGCGTGCCTCATCTCTGCATTTaGCCTCATTCTGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: GVRGAAAVLGILLWMEGVPHLCI*PHSAAA
Trigger: AGCAGCAGCAGAATGAGGCCAAATGCAGAGATGAGG...CACGCCTTCCATCCAGAGGAGAATGCCCAGGACTGCGGCGGCGCCTCGGACACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR CCA 90 bp CACCAGCTCCTGCAGCAGCCACCTGGTCGCCGTCAAGAAGGCAGAAATTGGGCTGCCTGCTGTTTGTGCTaGGCATCTTGTACCGGGGCG +
Preference number: 4 (lower is better)
Translates to: HQLLQQPPGRRQEGRNWAACCLC*ASCTGA
Trigger: CGCCCCGGTACAAGATGCCCAGCACAAACAGCAGGC...AGCCCAATTTCTGCCTTCTTGACGGCGACCAGGTGGCTGCTGCAGGAGCTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
CDS-3UTR CCA 90 bp CGGGGTACTCCGTGTCGCAGGGCTGCAGCGGGTCCTGCTTCTTGTGTTTGTGGGAATTCCAGCTTCATTTaGACGCCCGCGGCTACAGGG +
Preference number: 4 (lower is better)
Translates to: RGTPCRRAAAGPASCVCGNSSFI*TPAATG
Trigger: CCCTGTAGCCGCGGGCGTCCAAATGAAGCTGGAATT...CCCACAAACACAAGAAGCAGGACCCGCTGCAGCCCTGCGACACGGAGTACCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000537923.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646498.1
ENST00000647066.1
3UTR CAA 72 bp TCACCCGCACTTTCTGGTCCTTCTGCCCAGCGGAGGTaGAAGACGAAGCTGCCAGCAGGATGCTCTGAGGCC +
Preference number: 4 (lower is better)
Translates to: SPALSGPSAQRR*KTKLPAGCSEA
Trigger: GGCCTCAGAGCATCCTGCTGGCAGCTTCGTCTTCAACCTCCGCTGGGCAGAAGGACCAGAAAGTGCGGGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
3UTR CAA 72 bp CTGTCCTCTTGTCCACGGTCACCGCCACAGCTGTGCTaGCCGTCACCACCATGGGTTCACCCGCACTTTCTG +
Preference number: 4 (lower is better)
Translates to: LSSCPRSPPQLC*PSPPWVHPHFL
Trigger: CAGAAAGTGCGGGTGAACCCATGGTGGTGACGGCAAGCACAGCTGTGGCGGTGACCGTGGACAAGAGGACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
3UTR CAA 72 bp CATCCACAGTGCTGCACTGCAGCAATGGCTGTCCTCTaGTCCACGGTCACCGCCACAGCTGTGCTTGCCGTC +
Preference number: 4 (lower is better)
Translates to: HPQCCTAAMAVL*STVTATAVLAV
Trigger: GACGGCAAGCACAGCTGTGGCGGTGACCGTGGACAAGAGGACAGCCATTGCTGCAGTGCAGCACTGTGGATG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
CDS-3UTR TCA 90 bp TGGGATGGCTCTGGAAGGATCACCTTGCCAAAACACAGGTCAGGCTGGGTGGTGGCAGCTGCACGCTGCTaGTGGAGGTGTTCACCGGCA +
Preference number: 4 (lower is better)
Translates to: WDGSGRITLPKHRSGWVVAAARC*WRCSPA
Trigger: TGCCGGTGAACACCTCCATCAGCAGCGTGCAGCTGC...CACCACCCAGCCTGACCTGTGTTTTGGCAAGGTGATCCTTCCAGAGCCATCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000587995.5
ENST00000588077.5
ENST00000644394.1
ENST00000645018.2
ENST00000645225.1
ENST00000646018.1
CDS-3UTR TCA 90 bp TGGCCGGCTGGTACACGAACACGGGGTACTCCGTGTCGCAGGGCTGCAGCGGGTTACCTGGATAGATCCTaGAGAATCCAGTTGCACTGC +
Preference number: 4 (lower is better)
Translates to: WPAGTRTRGTPCRRAAAGYLDRS*RIQLHC
Trigger: GCAGTGCAACTGGATTCTTCAGGATCTATCCAGGTA...ACCCGCTGCAGCCCTGCGACACGGAGTACCCCGTGTTCGTGTACCAGCCGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
CDS-3UTR TCA 90 bp TCACACAGAACCAAATACTATGCCCCTTTCCCCGAGGCTCAGGCAGGAGGCGGTAGCAGTGTCAGGCTCTaGGCCTGCGAGCTGAGGAGC +
Preference number: 4 (lower is better)
Translates to: SHRTKYYAPFPEAQAGGGSSVRL*ACELRS
Trigger: GCTCCTCAGCTCGCAGGCTCAGAGCCTGACACTGCT...ACCGCCTCCTGCCTGAGCCTCGGGGAAAGGGGCATAGTATTTGGTTCTGTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585732.1
ENST00000647100.1
CDS-3UTR TCA 90 bp AAGCTCACACAGAACCAAATACTATGCCCCTTTCCCCGAGGCTCAGGCAGGAGGGGAAGCGGTCCAGGGTaGACACGCTGGCCTCGTCCT +
Preference number: 4 (lower is better)
Translates to: KLTQNQILCPFPRGSGRRGSGPG*TRWPRP
Trigger: AGGACGAGGCCAGCGTGTTCACCCTGGACCGCTTCC...CCTCCTGCCTGAGCCTCGGGGAAAGGGGCATAGTATTTGGTTCTGTGTGAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000585732.1
ENST00000647100.1
CDS-3UTR TCA 90 bp AGAACCAAATACTATGCCCCTTTCCCCGAGGCTCAGGCAGGAGGCGGTTCTGATGCCAGCAGGATGCTCTaGGGCCTGGCGGTACCACAG +
Preference number: 4 (lower is better)
Translates to: RTKYYAPFPEAQAGGGSDASRML*GLAVPQ
Trigger: CTGTGGTACCGCCAGGCCTCAGAGCATCCTGCTGGC...ATCAGAACCGCCTCCTGCCTGAGCCTCGGGGAAAGGGGCATAGTATTTGGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585732.1
ENST00000647100.1
CDS-3UTR TCA 90 bp CAAGCTGAGCTCACGCTGGCTTCCCGAAGAGGAGACAGGAAGGTTAGGTCAGAAGCCAGCAGGATGCTCTaGGGCCTGGCGGTACCACAG +
Preference number: 4 (lower is better)
Translates to: QAELTLASRRGDRKVRSEASRML*GLAVPQ
Trigger: CTGTGGTACCGCCAGGCCTCAGAGCATCCTGCTGGC...TTCTGACCTAACCTTCCTGTCTCCTCTTCGGGAAGCCAGCGTGAGCTCAGCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000587995.5
ENST00000644394.1
ENST00000645018.2
ENST00000646018.1
ENST00000646946.1
CDS-3UTR TCA 90 bp CCAAATACTATGCCCCTTTCCCCGAGGCTCAGGCAGGAGGCGGTTCTGATGCTTCTGCCCAGCGGAGGTTaGAGACGAAGCTGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: PNTMPLSPRLRQEAVLMLLPSGG*RRSCQQ
Trigger: CTGCTGGCAGCTTCGTCTTCAACCTCCGCTGGGCAG...AAGCATCAGAACCGCCTCCTGCCTGAGCCTCGGGGAAAGGGGCATAGTATTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585732.1
ENST00000647100.1
CDS-3UTR TCA 90 bp GTCCAAGCTGAGCTCACGCTGGCTTCCCGAAGAGGAGACAGGAAGGTTAGGTCACTGCCCAGCGGAGGTTaGAGACGAAGCTGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: VQAELTLASRRGDRKVRSLPSGG*RRSCQQ
Trigger: CTGCTGGCAGCTTCGTCTTCAACCTCCGCTGGGCAG...TGACCTAACCTTCCTGTCTCCTCTTCGGGAAGCCAGCGTGAGCTCAGCTTGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000587995.5
ENST00000644394.1
ENST00000645018.2
ENST00000646018.1
ENST00000646946.1
CDS-3UTR TCA 90 bp AGCTCACACAGAACCAAATACTATGCCCCTTTCCCCGAGGCTCAGGCAGGAGGCCTGCCCAGCGGAGGTTaGAGACGAAGCTGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: SSHRTKYYAPFPEAQAGGLPSGG*RRSCQQ
Trigger: CTGCTGGCAGCTTCGTCTTCAACCTCCGCTGGGCAG...GCCTCCTGCCTGAGCCTCGGGGAAAGGGGCATAGTATTTGGTTCTGTGTGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585732.1
ENST00000647100.1
CDS-3UTR TCA 90 bp TGGTACACGAACACGGGGTACTCCGTGTCGCAGGGCTGCAGCGGGTCCTGCTTCACCCGTTGTTGTCGATaGCGAAGCAGTCCAGATCAC +
Preference number: 4 (lower is better)
Translates to: WYTNTGYSVSQGCSGSCFTRCCR*RSSPDH
Trigger: GTGATCTGGACTGCTTCGTCATCGACAACAACGGGT...GAAGCAGGACCCGCTGCAGCCCTGCGACACGGAGTACCCCGTGTTCGTGTACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000537923.5
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646946.1
ENST00000647066.1
CDS-3UTR TCA 90 bp TGGCCTCCCGGATGGCCGGCTGGTACACGAACACGGGGTACTCCGTGTCGCAGGCAGAGGCATTATATTTaGCTTCTGTCGCCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: WPPGWPAGTRTRGTPCRRQRHYI*LLSPPA
Trigger: TGCAGGAGGCGACAGAAGTCAAATATAATGCCTCTG...CCTGCGACACGGAGTACCCCGTGTTCGTGTACCAGCCGGCCATCCGGGAGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR TCA 90 bp CCCGTTGGCCTCCCGGATGGCCGGCTGGTACACGAACACGGGGTACTCCGTGTCCAGAGGCATTATATTTaGCTTCTGTCGCCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: PVGLPDGRLVHEHGVLRVQRHYI*LLSPPA
Trigger: TGCAGGAGGCGACAGAAGTCAAATATAATGCCTCTG...GACACGGAGTACCCCGTGTTCGTGTACCAGCCGGCCATCCGGGAGGCCAACGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR TCA 90 bp AGGCTGAGGTGTCCGAGGCGCCGCCGCAGTCCTGGGCATTCTCCTCTGGATGGAGAAAGTGGTGCCAGGTaGTTGGTTTCCTGTTCCATC +
Preference number: 4 (lower is better)
Translates to: RLRCPRRRRSPGHSPLDGESGAR*LVSCSI
Trigger: GATGGAACAGGAAACCAATCACCTGGCACCACTTTC...TCCATCCAGAGGAGAATGCCCAGGACTGCGGCGGCGCCTCGGACACCTCAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR TCA 90 bp GCTCTGGAAGGATCACCTTGCCAAAACACAGGTCAGGCTGGGTGGTGTCACCGCTGTCTTGGTCCAAGCTaGGCTCACGCTGGCTTCCCG +
Preference number: 4 (lower is better)
Translates to: ALEGSPCQNTGQAGWCHRCLGPS*AHAGFP
Trigger: CGGGAAGCCAGCGTGAGCTCAGCTTGGACCAAGACA...GCGGTGACACCACCCAGCCTGACCTGTGTTTTGGCAAGGTGATCCTTCCAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR TCA 90 bp CTCCGTGTCGCAGGGCTGCAGCGGGTCCTGCTTCTTGTGTTTGTGGGAGTGATGAGTGGCCTCCCACCATaGGCCTCACTTTGGGGAATC +
Preference number: 4 (lower is better)
Translates to: LRVAGLQRVLLLVFVGVMSGLPP*ASLWGI
Trigger: GATTCCCCAAAGTGAGGCTCATGGTGGGAGGCCACT...CATCACTCCCACAAACACAAGAAGCAGGACCCGCTGCAGCCCTGCGACACGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR TCA 90 bp CACCAGCTCCTGCAGCAGCCACCTGGTCGCCGTCAAGAAGGCAGAAATTGGGCTAGTGGCCTCCCACCATaGGCCTCACTTTGGGGAATC +
Preference number: 4 (lower is better)
Translates to: HQLLQQPPGRRQEGRNWASGLPP*ASLWGI
Trigger: GATTCCCCAAAGTGAGGCTCATGGTGGGAGGCCACT...AGCCCAATTTCTGCCTTCTTGACGGCGACCAGGTGGCTGCTGCAGGAGCTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR TCA 90 bp GCTCTGGAAGGATCACCTTGCCAAAACACAGGTCAGGCTGGGTGGTGTCACCGCCAGCAGCTAGGAAGGTaGGTGGCCTCCCACCATGAG +
Preference number: 4 (lower is better)
Translates to: ALEGSPCQNTGQAGWCHRQQLGR*VASHHE
Trigger: CTCATGGTGGGAGGCCACTCACCTTCCTAGCTGCTG...GCGGTGACACCACCCAGCCTGACCTGTGTTTTGGCAAGGTGATCCTTCCAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR TCA 90 bp CCGGATGGCCGGCTGGTACACGAACACGGGGTACTCCGTGTCGCAGGGCTGCAGTTAAATGGAAAGATTTaGGGCCGGCCTCTCCCACAT +
Preference number: 4 (lower is better)
Translates to: PDGRLVHEHGVLRVAGLQLNGKI*GRPLPH
Trigger: ATGTGGGAGAGGCCGGCCTCAAATCTTTCCATTTAA...CTGCAGCCCTGCGACACGGAGTACCCCGTGTTCGTGTACCAGCCGGCCATCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537784.5
ENST00000646946.1
CDS-3UTR TCA 90 bp CCCGCACTCCACGATCCCGTTGGCCTCCCGGATGGCCGGCTGGTACACGAACACTTGTGTTTGTGGGAGTaGTGGAAGACACTTTTGGCC +
Preference number: 4 (lower is better)
Translates to: PALHDPVGLPDGRLVHEHLCLWE*WKTLLA
Trigger: GGCCAAAAGTGTCTTCCATCACTCCCACAAACACAA...GTGTTCGTGTACCAGCCGGCCATCCGGGAGGCCAACGGGATCGTGGAGTGCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR GCA 90 bp TGGGATGGCTCTGGAAGGATCACCTTGCCAAAACACAGGTCAGGCTGGGTGGTGGGGGAATCCAGCGGCTaGTGGAGCTGGGGTTTGCGA +
Preference number: 4 (lower is better)
Translates to: WDGSGRITLPKHRSGWVVGESSG*WSWGLR
Trigger: TCGCAAACCCCAGCTCCAGCAGCCGCTGGATTCCCC...CACCACCCAGCCTGACCTGTGTTTTGGCAAGGTGATCCTTCCAGAGCCATCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000587995.5
ENST00000644394.1
ENST00000645018.2
ENST00000646018.1
CDS-3UTR GCA 90 bp TGGCAGGGCCCGCACTCCACGATCCCGTTGGCCTCCCGGATGGCCGGCTGGTACATGCAATCCACTTCATaGGGTCAGCAAAAGACACTT +
Preference number: 4 (lower is better)
Translates to: WQGPHSTIPLASRMAGWYMQSTS*GQQKTL
Trigger: AAGTGTCTTTTGCTGACCGCATGAAGTGGATTGCAT...GTACCAGCCGGCCATCCGGGAGGCCAACGGGATCGTGGAGTGCGGGCCCTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
CDS-3UTR GCA 90 bp CCCGTTGGCCTCCCGGATGGCCGGCTGGTACACGAACACGGGGTACTCCGTGTCGCCTTTGTTGTTGCATaGAATCCACTTCATGCGGTC +
Preference number: 4 (lower is better)
Translates to: PVGLPDGRLVHEHGVLRVAFVVA*NPLHAV
Trigger: GACCGCATGAAGTGGATTGCATGCAACAACAAAGGC...GACACGGAGTACCCCGTGTTCGTGTACCAGCCGGCCATCCGGGAGGCCAACGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
CDS-3UTR GCA 90 bp TTTTGGGATGGCTCTGGAAGGATCACCTTGCCAAAACACAGGTCAGGCTGGGTGGGAGGCCAGCCCGGGTaGCCAGGAAGGCCATGTCCA +
Preference number: 4 (lower is better)
Translates to: FWDGSGRITLPKHRSGWVGGQPG*PGRPCP
Trigger: TGGACATGGCCTTCCTGGGCACCCGGGCTGGCCTCC...CACCCAGCCTGACCTGTGTTTTGGCAAGGTGATCCTTCCAGAGCCATCCCAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000587995.5
ENST00000588077.5
ENST00000644394.1
ENST00000645018.2
ENST00000645225.1
ENST00000646018.1
ENST00000646946.1
CDS-3UTR GCA 90 bp CTTTTTGGGATGGCTCTGGAAGGATCACCTTGCCAAAACACAGGTCAGGCTGGGGGAGGCCAGCCCGGGTaGCCAGGAAGGCCATGTCCA +
Preference number: 4 (lower is better)
Translates to: LFGMALEGSPCQNTGQAGGGQPG*PGRPCP
Trigger: TGGACATGGCCTTCCTGGGCACCCGGGCTGGCCTCC...CCCAGCCTGACCTGTGTTTTGGCAAGGTGATCCTTCCAGAGCCATCCCAAAAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000587995.5
ENST00000588077.5
ENST00000644394.1
ENST00000645018.2
ENST00000645225.1
ENST00000646018.1
ENST00000646946.1
CDS-3UTR GCA 90 bp ATCTGCTGCACCACAAATACCTTCTGGCAGGGCCCGCACTCCACGATCCCGTTGTCACCGCCACAGCTGTaGTTGCCGTCACCACCATGG +
Preference number: 4 (lower is better)
Translates to: ICCTTNTFWQGPHSTIPLSPPQL*LPSPPW
Trigger: CCATGGTGGTGACGGCAAGCACAGCTGTGGCGGTGA...CAACGGGATCGTGGAGTGCGGGCCCTGCCAGAAGGTATTTGTGGTGCAGCAGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000646018.1
ENST00000646946.1
CDS-3UTR GCA 90 bp ACCAAATACTATGCCCCTTTCCCCGAGGCTCAGGCAGGAGGCGGTTCTGATGCTGCTGCACTGCCGCGTTaGCGCCCAGAATTTGCGCTG +
Preference number: 4 (lower is better)
Translates to: TKYYAPFPEAQAGGGSDAAALPR*RPEFAL
Trigger: CAGCGCAAATTCTGGGCGGCAACGCGGCAGTGCAGC...AGCATCAGAACCGCCTCCTGCCTGAGCCTCGGGGAAAGGGGCATAGTATTTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585732.1
ENST00000647100.1
CDS-3UTR GCA 90 bp GTCCAAGCTGAGCTCACGCTGGCTTCCCGAAGAGGAGACAGGAAGGTTAGGTCAGCTGCACTGCCGCGTTaGCGCCCAGAATTTGCGCTG +
Preference number: 4 (lower is better)
Translates to: VQAELTLASRRGDRKVRSAALPR*RPEFAL
Trigger: CAGCGCAAATTCTGGGCGGCAACGCGGCAGTGCAGC...TGACCTAACCTTCCTGTCTCCTCTTCGGGAAGCCAGCGTGAGCTCAGCTTGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000382722.10
ENST00000537784.5
ENST00000587995.5
ENST00000644394.1
ENST00000645018.2
ENST00000646946.1
CDS-3UTR GCA 90 bp CTCCTGCAGCAGCCACCTGGTCGCCGTCAAGAAGGCAGAAATTGGGCTGACCAGGGCTGCAGCGGGTCCTaGTTCTTGTGTTTGTGGGAG +
Preference number: 4 (lower is better)
Translates to: LLQQPPGRRQEGRNWADQGCSGS*FLCLWE
Trigger: CTCCCACAAACACAAGAAGCAGGACCCGCTGCAGCC...CTGGTCAGCCCAATTTCTGCCTTCTTGACGGCGACCAGGTGGCTGCTGCAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000537923.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
ENST00000647066.1
CDS-3UTR GCA 90 bp CTCCGTGTCGCAGGGCTGCAGCGGGTCCTGCTTCTTGTGTTTGTGGGAGTGATGGGCTGCAGCGGGTCCTaGTTCTTGTGTTTGTGGGAG +
Preference number: 4 (lower is better)
Translates to: LRVAGLQRVLLLVFVGVMGCSGS*FLCLWE
Trigger: CTCCCACAAACACAAGAAGCAGGACCCGCTGCAGCC...CATCACTCCCACAAACACAAGAAGCAGGACCCGCTGCAGCCCTGCGACACGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000537923.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
ENST00000647066.1
CDS-3UTR GCA 90 bp AGGAGCGTTGGCCTGGGGGCGACCCAACTGCAGTTAGCTGCATCCCATGTCAGTGGCTGCAGCGGGTCCTaGTTCTTGTGTTTGTGGGAG +
Preference number: 4 (lower is better)
Translates to: RSVGLGATQLQLAASHVSGCSGS*FLCLWE
Trigger: CTCCCACAAACACAAGAAGCAGGACCCGCTGCAGCC...ACTGACATGGGATGCAGCTAACTGCAGTTGGGTCGCCCCCAGGCCAACGCTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000585385.5
ENST00000587995.5
ENST00000642253.1
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR GCA 90 bp TGGGATGGCTCTGGAAGGATCACCTTGCCAAAACACAGGTCAGGCTGGGTGGTGTCCGTGTCGCAGGGCTaGAGCGGGTCCTGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: WDGSGRITLPKHRSGWVVSVSQG*SGSCFL
Trigger: CAAGAAGCAGGACCCGCTGCAGCCCTGCGACACGGA...CACCACCCAGCCTGACCTGTGTTTTGGCAAGGTGATCCTTCCAGAGCCATCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000585385.5
ENST00000587995.5
ENST00000588077.5
ENST00000642253.1
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000645225.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR GCA 90 bp TGGCAGGGCCCGCACTCCACGATCCCGTTGGCCTCCCGGATGGCCGGCTGGTACTTACTGTTGGGAATCTaGTGCACCACAAATACCTTC +
Preference number: 4 (lower is better)
Translates to: WQGPHSTIPLASRMAGWYLLLGI*CTTNTF
Trigger: GAAGGTATTTGTGGTGCAGCAGATTCCCAACAGTAA...GTACCAGCCGGCCATCCGGGAGGCCAACGGGATCGTGGAGTGCGGGCCCTGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000537923.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
ENST00000647066.1
CDS-3UTR GCA 90 bp GTTGGCCTGGGGGCGACCCAACTGCAGTTAGCTGCATCCCATGTCAGTGCTGACCTGGTGGGAAGATGCTaGAGTCACAGGTGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: VGLGATQLQLAASHVSADLVGRC*SHRWGL
Trigger: CAGACCCCACCTGTGACTGCAGCATCTTCCCACCAG...GTCAGCACTGACATGGGATGCAGCTAACTGCAGTTGGGTCGCCCCCAGGCCAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000585385.5
ENST00000587995.5
ENST00000642253.1
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR GCA 90 bp GAACACGGGGTACTCCGTGTCGCAGGGCTGCAGCGGGTCCTGCTTCTTGTGTTTCTGGTGGGAAGATGCTaGAGTCACAGGTGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: EHGVLRVAGLQRVLLLVFLVGRC*SHRWGL
Trigger: CAGACCCCACCTGTGACTGCAGCATCTTCCCACCAG...AAACACAAGAAGCAGGACCCGCTGCAGCCCTGCGACACGGAGTACCCCGTGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000537923.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
ENST00000647066.1
CDS-3UTR GCA 90 bp GGAATCTGCTGCACCACAAATACCTTCTGGCAGGGCCCGCACTCCACGATCCCGCTGGTGGGAAGATGCTaGAGTCACAGGTGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: GICCTTNTFWQGPHSTIPLVGRC*SHRWGL
Trigger: CAGACCCCACCTGTGACTGCAGCATCTTCCCACCAG...CGGGATCGTGGAGTGCGGGCCCTGCCAGAAGGTATTTGTGGTGCAGCAGATTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000537923.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
ENST00000647066.1
CDS-3UTR GCA 90 bp GATCCCGTTGGCCTCCCGGATGGCCGGCTGGTACACGAACACGGGGTACTCCGTCATTTGGCCTCATTCTaGTGCTGCTTCTCAGTACCC +
Preference number: 4 (lower is better)
Translates to: DPVGLPDGRLVHEHGVLRHLASF*CCFSVP
Trigger: GGGTACTGAGAAGCAGCAGCAGAATGAGGCCAAATG...ACGGAGTACCCCGTGTTCGTGTACCAGCCGGCCATCCGGGAGGCCAACGGGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR GCA 90 bp AGGCTGAGGTGTCCGAGGCGCCGCCGCAGTCCTGGGCATTCTCCTCTGGATGGACATTTGGCCTCATTCTaGTGCTGCTTCTCAGTACCC +
Preference number: 4 (lower is better)
Translates to: RLRCPRRRRSPGHSPLDGHLASF*CCFSVP
Trigger: GGGTACTGAGAAGCAGCAGCAGAATGAGGCCAAATG...TCCATCCAGAGGAGAATGCCCAGGACTGCGGCGGCGCCTCGGACACCTCAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR CCA 90 bp TACTGTTGGGAATCTGCTGCACCACAAATACCTTCTGGCAGGGCCCGCACTCCAGAGTTGCAGGCATGGTaGGCCTGGGGTTGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: YCWESAAPQIPSGRARTPELQAW*AWGWGG
Trigger: CCCTCCCCAACCCCAGGCCCACCATGCCTGCAACTC...TGGAGTGCGGGCCCTGCCAGAAGGTATTTGTGGTGCAGCAGATTCCCAACAGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
CDS-3UTR CCA 90 bp AAGCTCACACAGAACCAAATACTATGCCCCTTTCCCCGAGGCTCAGGCAGGAGGGAGTTGCAGGCATGGTaGGCCTGGGGTTGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: KLTQNQILCPFPRGSGRRELQAW*AWGWGG
Trigger: CCCTCCCCAACCCCAGGCCCACCATGCCTGCAACTC...CCTCCTGCCTGAGCCTCGGGGAAAGGGGCATAGTATTTGGTTCTGTGTGAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000585732.1
ENST00000647100.1
CDS-3UTR CCA 90 bp AAGCTCACACAGAACCAAATACTATGCCCCTTTCCCCGAGGCTCAGGCAGGAGGGCCACGGGCATTGGCTaGAGGGGAATCCAGCGGCTG +
Preference number: 4 (lower is better)
Translates to: KLTQNQILCPFPRGSGRRATGIG*RGIQRL
Trigger: CAGCCGCTGGATTCCCCTCCAGCCAATGCCCGTGGC...CCTCCTGCCTGAGCCTCGGGGAAAGGGGCATAGTATTTGGTTCTGTGTGAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000585732.1
ENST00000647100.1
CDS-3UTR CCA 90 bp TTTGGGATGGCTCTGGAAGGATCACCTTGCCAAAACACAGGTCAGGCTGGGTGGGCCACGGGCATTGGCTaGAGGGGAATCCAGCGGCTG +
Preference number: 4 (lower is better)
Translates to: FGMALEGSPCQNTGQAGWATGIG*RGIQRL
Trigger: CAGCCGCTGGATTCCCCTCCAGCCAATGCCCGTGGC...CCACCCAGCCTGACCTGTGTTTTGGCAAGGTGATCCTTCCAGAGCCATCCCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000587995.5
ENST00000644394.1
ENST00000645018.2
ENST00000646018.1
CDS-3UTR CCA 90 bp TGGGCATTCTCCTCTGGATGGAAGGCGTGGCAGGAGTCTGGTCGCCGGCGGAGCTTGTCTCGGTCCGCCTaGACGAGGATCCCTTTAAAA +
Preference number: 4 (lower is better)
Translates to: WAFSSGWKAWQESGRRRSLSRSA*TRIPLK
Trigger: TTTTAAAGGGATCCTCGTCCAGGCGGACCGAGACAA...GCTCCGCCGGCGACCAGACTCCTGCCACGCCTTCCATCCAGAGGAGAATGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
CDS-3UTR CCA 90 bp GTGCCAGGTGATTGGTTTCCTGTTCCATCCAGCATTCTCCGGAGCCAGGGGCCAGCTTCTCTCAGGGCTTaGTCCACGACCCCCACACCT +
Preference number: 4 (lower is better)
Translates to: VPGDWFPVPSSILRSQGPASLRA*STTPTP
Trigger: AGGTGTGGGGGTCGTGGACCAAGCCCTGAGAGAAGC...TGGCCCCTGGCTCCGGAGAATGCTGGATGGAACAGGAAACCAATCACCTGGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000587995.5
ENST00000644394.1
ENST00000645018.2
ENST00000646018.1
CDS-3UTR CCA 90 bp GGCCTCCCGGATGGCCGGCTGGTACACGAACACGGGGTACTCCGTGTCGCAGGGGGATGTAGCCATTGTTaGTGTTCAGAAAGGCGTATC +
Preference number: 4 (lower is better)
Translates to: GLPDGRLVHEHGVLRVAGGCSHC*CSERRI
Trigger: GATACGCCTTTCTGAACACCAACAATGGCTACATCC...CCCTGCGACACGGAGTACCCCGTGTTCGTGTACCAGCCGGCCATCCGGGAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
CDS-3UTR CCA 90 bp TGGCCTCCCGGATGGCCGGCTGGTACACGAACACGGGGTACTCCGTGTCGCAGGGCCCAGAATTTGCGCTaGAGGAATTCCAGCTTCATT +
Preference number: 4 (lower is better)
Translates to: WPPGWPAGTRTRGTPCRRAQNLR*RNSSFI
Trigger: AATGAAGCTGGAATTCCTCCAGCGCAAATTCTGGGC...CCTGCGACACGGAGTACCCCGTGTTCGTGTACCAGCCGGCCATCCGGGAGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000537784.5
ENST00000537923.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646498.1
ENST00000646946.1
ENST00000647066.1
CDS-3UTR CCA 90 bp GTTGGCCTGGGGGCGACCCAACTGCAGTTAGCTGCATCCCATGTCAGTGCTGACCAAGAAGGCAGAAATTaGGCTGACCAGGGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: VGLGATQLQLAASHVSADQEGRN*ADQGLG
Trigger: GCCCAGCCCCTGGTCAGCCCAATTTCTGCCTTCTTG...GTCAGCACTGACATGGGATGCAGCTAACTGCAGTTGGGTCGCCCCCAGGCCAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000585385.5
ENST00000587995.5
ENST00000642253.1
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR CCA 90 bp AGGAGCGTTGGCCTGGGGGCGACCCAACTGCAGTTAGCTGCATCCCATGTCAGTCAAGAAGGCAGAAATTaGGCTGACCAGGGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: RSVGLGATQLQLAASHVSQEGRN*ADQGLG
Trigger: GCCCAGCCCCTGGTCAGCCCAATTTCTGCCTTCTTG...ACTGACATGGGATGCAGCTAACTGCAGTTGGGTCGCCCCCAGGCCAACGCTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000585385.5
ENST00000587995.5
ENST00000642253.1
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR CCA 90 bp GTCCAAGCTGAGCTCACGCTGGCTTCCCGAAGAGGAGACAGGAAGGTTAGGTCACGTTGGCCTCCCGGATaGCCGGCTGGTACACGAACA +
Preference number: 4 (lower is better)
Translates to: VQAELTLASRRGDRKVRSRWPPG*PAGTRT
Trigger: TGTTCGTGTACCAGCCGGCCATCCGGGAGGCCAACG...TGACCTAACCTTCCTGTCTCCTCTTCGGGAAGCCAGCGTGAGCTCAGCTTGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000587995.5
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR CCA 90 bp TCTTGGTCCAAGCTGAGCTCACGCTGGCTTCCCGAAGAGGAGACAGGAAGGTTAACTCCACGATCCCGTTaGCCTCCCGGATGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: SWSKLSSRWLPEEETGRLTPRSR*PPGWPA
Trigger: AGCCGGCCATCCGGGAGGCCAACGGGATCGTGGAGT...TAACCTTCCTGTCTCCTCTTCGGGAAGCCAGCGTGAGCTCAGCTTGGACCAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000587995.5
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR CCA 90 bp GGGGCGACCCAACTGCAGTTAGCTGCATCCCATGTCAGTGCTGACTTTTTGGGAACTCCACGATCCCGTTaGCCTCCCGGATGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: GATQLQLAASHVSADFLGTPRSR*PPGWPA
Trigger: AGCCGGCCATCCGGGAGGCCAACGGGATCGTGGAGT...TCCCAAAAAGTCAGCACTGACATGGGATGCAGCTAACTGCAGTTGGGTCGCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000585385.5
ENST00000587995.5
ENST00000642253.1
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR CCA 90 bp AGCTCCTGCAGCAGCCACCTGGTCGCCGTCAAGAAGGCAGAAATTGGGCTGACCACCACAAATACCTTCTaGCAGGGCCCGCACTCCACG +
Preference number: 4 (lower is better)
Translates to: SSCSSHLVAVKKAEIGLTTTNTF*QGPHST
Trigger: CGTGGAGTGCGGGCCCTGCCAGAAGGTATTTGTGGT...GGTCAGCCCAATTTCTGCCTTCTTGACGGCGACCAGGTGGCTGCTGCAGGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000537923.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
ENST00000647066.1
CDS-3UTR CCA 90 bp AGGAGCGTTGGCCTGGGGGCGACCCAACTGCAGTTAGCTGCATCCCATGTCAGTACCACAAATACCTTCTaGCAGGGCCCGCACTCCACG +
Preference number: 4 (lower is better)
Translates to: RSVGLGATQLQLAASHVSTTNTF*QGPHST
Trigger: CGTGGAGTGCGGGCCCTGCCAGAAGGTATTTGTGGT...ACTGACATGGGATGCAGCTAACTGCAGTTGGGTCGCCCCCAGGCCAACGCTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000585385.5
ENST00000587995.5
ENST00000642253.1
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR CCA 90 bp TGCTGCACCACAAATACCTTCTGGCAGGGCCCGCACTCCACGATCCCGTTGGCCCTCCTGCAGCACTGGTaGGAAGATGCTGCAGTCACA +
Preference number: 4 (lower is better)
Translates to: CCTTNTFWQGPHSTIPLALLQHW*EDAAVT
Trigger: TGTGACTGCAGCATCTTCCCACCAGTGCTGCAGGAG...GGCCAACGGGATCGTGGAGTGCGGGCCCTGCCAGAAGGTATTTGTGGTGCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000537923.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
ENST00000647066.1
CDS-3UTR CCA 90 bp GCTGCACCACAAATACCTTCTGGCAGGGCCCGCACTCCACGATCCCGTTGGCCTCTCCTGCAGCACTGGTaGGAAGATGCTGCAGTCACA +
Preference number: 4 (lower is better)
Translates to: AAPQIPSGRARTPRSRWPLLQHW*EDAAVT
Trigger: TGTGACTGCAGCATCTTCCCACCAGTGCTGCAGGAG...AGGCCAACGGGATCGTGGAGTGCGGGCCCTGCCAGAAGGTATTTGTGGTGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000537923.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
ENST00000647066.1
CDS-3UTR CCA 90 bp TACACGAACACGGGGTACTCCGTGTCGCAGGGCTGCAGCGGGTCCTGCTTCTTGCTCCTGCAGCACTGGTaGGAAGATGCTGCAGTCACA +
Preference number: 4 (lower is better)
Translates to: YTNTGYSVSQGCSGSCFLLLQHW*EDAAVT
Trigger: TGTGACTGCAGCATCTTCCCACCAGTGCTGCAGGAG...CAAGAAGCAGGACCCGCTGCAGCCCTGCGACACGGAGTACCCCGTGTTCGTGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000537923.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
ENST00000647066.1
CDS-3UTR CCA 90 bp TTTGGGATGGCTCTGGAAGGATCACCTTGCCAAAACACAGGTCAGGCTGGGTGGCGCCGGCGGAGCTTCTaGGAGCGCATCCGGTCACAT +
Preference number: 4 (lower is better)
Translates to: FGMALEGSPCQNTGQAGWRRRSF*ERIRSH
Trigger: ATGTGACCGGATGCGCTCCCAGAAGCTCCGCCGGCG...CCACCCAGCCTGACCTGTGTTTTGGCAAGGTGATCCTTCCAGAGCCATCCCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000585385.5
ENST00000587995.5
ENST00000588077.5
ENST00000642253.1
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000645225.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR CCA 90 bp GAGGAGGAGGTTACTGTTGGGAATCTGCTGCACCACAAATACCTTCTGGCAGGGGGCGTGGCAGGAGTCTaGTCGCCGGCGGAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: EEEVTVGNLLHHKYLLAGGVAGV*SPAELL
Trigger: CAGAAGCTCCGCCGGCGACCAGACTCCTGCCACGCC...CCCTGCCAGAAGGTATTTGTGGTGCAGCAGATTCCCAACAGTAACCTCCTCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR CCA 90 bp ATTTTGTCTTGGTCCAAGCTGAGCTCACGCTGGCTTCCCGAAGAGGAGACAGGAGGCGTGGCAGGAGTCTaGTCGCCGGCGGAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: ILSWSKLSSRWLPEEETGGVAGV*SPAELL
Trigger: CAGAAGCTCCGCCGGCGACCAGACTCCTGCCACGCC...TCCTGTCTCCTCTTCGGGAAGCCAGCGTGAGCTCAGCTTGGACCAAGACAAAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000587995.5
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR CCA 90 bp TTTTGGGATGGCTCTGGAAGGATCACCTTGCCAAAACACAGGTCAGGCTGGGTGGGCGTGGCAGGAGTCTaGTCGCCGGCGGAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: FWDGSGRITLPKHRSGWVGVAGV*SPAELL
Trigger: CAGAAGCTCCGCCGGCGACCAGACTCCTGCCACGCC...CACCCAGCCTGACCTGTGTTTTGGCAAGGTGATCCTTCCAGAGCCATCCCAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000585385.5
ENST00000587995.5
ENST00000588077.5
ENST00000642253.1
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000645225.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR CCA 90 bp CTGCAGCAGCCACCTGGTCGCCGTCAAGAAGGCAGAAATTGGGCTGACCAGGGGGCATTCTCCTCTGGATaGAAGGCGTGGCAGGAGTCT +
Preference number: 4 (lower is better)
Translates to: LQQPPGRRQEGRNWADQGAFSSG*KAWQES
Trigger: AGACTCCTGCCACGCCTTCCATCCAGAGGAGAATGC...CCCCTGGTCAGCCCAATTTCTGCCTTCTTGACGGCGACCAGGTGGCTGCTGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR CCA 90 bp CACGGGGTACTCCGTGTCGCAGGGCTGCAGCGGGTCCTGCTTCTTGTGTTTGTGGCATTCTCCTCTGGATaGAAGGCGTGGCAGGAGTCT +
Preference number: 4 (lower is better)
Translates to: HGVLRVAGLQRVLLLVFVAFSSG*KAWQES
Trigger: AGACTCCTGCCACGCCTTCCATCCAGAGGAGAATGC...CACAAACACAAGAAGCAGGACCCGCTGCAGCCCTGCGACACGGAGTACCCCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR CCA 90 bp AGGAGCGTTGGCCTGGGGGCGACCCAACTGCAGTTAGCTGCATCCCATGTCAGTCTGGGCATTCTCCTCTaGATGGAAGGCGTGGCAGGA +
Preference number: 4 (lower is better)
Translates to: RSVGLGATQLQLAASHVSLGILL*MEGVAG
Trigger: TCCTGCCACGCCTTCCATCCAGAGGAGAATGCCCAG...ACTGACATGGGATGCAGCTAACTGCAGTTGGGTCGCCCCCAGGCCAACGCTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000585385.5
ENST00000587995.5
ENST00000642253.1
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR CCA 90 bp GAGCTCACGCTGGCTTCCCGAAGAGGAGACAGGAAGGTTAGGTCAGAAGTATGCGCGCCGCCGCAGTCCTaGGCATTCTCCTCTGGATGG +
Preference number: 4 (lower is better)
Translates to: ELTLASRRGDRKVRSEVCAPPQS*AFSSGW
Trigger: CCATCCAGAGGAGAATGCCCAGGACTGCGGCGGCGC...GCATACTTCTGACCTAACCTTCCTGTCTCCTCTTCGGGAAGCCAGCGTGAGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000587995.5
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR CCA 90 bp CGTTGGCCTCCCGGATGGCCGGCTGGTACACGAACACGGGGTACTCCGTGTCGCGCTGACTTTTTGGGATaGCTCTGGAAGGATCACCTT +
Preference number: 4 (lower is better)
Translates to: RWPPGWPAGTRTRGTPCRADFLG*LWKDHL
Trigger: AAGGTGATCCTTCCAGAGCCATCCCAAAAAGTCAGC...GCGACACGGAGTACCCCGTGTTCGTGTACCAGCCGGCCATCCGGGAGGCCAACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR CCA 90 bp GAAGGATCACCTTGCCAAAACACAGGTCAGGCTGGGTGGTGTCACCGCAGGAGTAGAGGAGCGTTGGCCTaGGGGCGACCCAACTGCAGT +
Preference number: 4 (lower is better)
Translates to: EGSPCQNTGQAGWCHRRSRGALA*GRPNCS
Trigger: ACTGCAGTTGGGTCGCCCCCAGGCCAACGCTCCTCT...ACTCCTGCGGTGACACCACCCAGCCTGACCTGTGTTTTGGCAAGGTGATCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR CCA 90 bp TCCCGGATGGCCGGCTGGTACACGAACACGGGGTACTCCGTGTCGCAGGGCTGCGCTGGGTCTGGACTCTaGAGTACAGGAAGAACTAAA +
Preference number: 4 (lower is better)
Translates to: SRMAGWYTNTGYSVSQGCAGSGL*STGRTK
Trigger: TTTAGTTCTTCCTGTACTCCAGAGTCCAGACCCAGC...GCAGCCCTGCGACACGGAGTACCCCGTGTTCGTGTACCAGCCGGCCATCCGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR CCA 90 bp TCCACGATCCCGTTGGCCTCCCGGATGGCCGGCTGGTACACGAACACGGGGTACTTTCTTGGCTGGGTCTaGACTCTGGAGTACAGGAAG +
Preference number: 4 (lower is better)
Translates to: STIPLASRMAGWYTNTGYFLGWV*TLEYRK
Trigger: CTTCCTGTACTCCAGAGTCCAGACCCAGCCAAGAAA...GTACCCCGTGTTCGTGTACCAGCCGGCCATCCGGGAGGCCAACGGGATCGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR CCA 90 bp AGCAGGAGTAGGGGCGGCGAGGCTGAGGTGTCCGAGGCGCCGCCGCAGTCCTGGGATGTCTCAGCCTATTaGCTTTTCATAGATGCAAAC +
Preference number: 4 (lower is better)
Translates to: SRSRGGEAEVSEAPPQSWDVSAY*LFIDAN
Trigger: GTTTGCATCTATGAAAAGCCAATAGGCTGAGACATC...CCAGGACTGCGGCGGCGCCTCGGACACCTCAGCCTCGCCGCCCCTACTCCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR TCA 90 bp CAGGTGATTGGTTTCCTGTTCCATCCAGCATTCTCCGGAGCCAGGGGCCACCAGCGACCCCCACACCTTTaGCCATCAACTCCTCCACCA +
Preference number: 4 (lower is better)
Translates to: QVIGFLFHPAFSGARGHQRPPHL*PSTPPP
Trigger: TGGTGGAGGAGTTGATGGTCAAAGGTGTGGGGGTCG...CTGGTGGCCCCTGGCTCCGGAGAATGCTGGATGGAACAGGAAACCAATCACCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000587995.5
ENST00000644394.1
ENST00000645018.2
ENST00000646018.1
CDS-3UTR TCA 90 bp GGGGCGACCCAACTGCAGTTAGCTGCATCCCATGTCAGTGCTGACTTTTTGGGAAGCAGTGTCAGGCTCTaGGCCTGCGAGCTGAGGAGC +
Preference number: 4 (lower is better)
Translates to: GATQLQLAASHVSADFLGSSVRL*ACELRS
Trigger: GCTCCTCAGCTCGCAGGCTCAGAGCCTGACACTGCT...TCCCAAAAAGTCAGCACTGACATGGGATGCAGCTAACTGCAGTTGGGTCGCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000587995.5
ENST00000644394.1
ENST00000645018.2
ENST00000646018.1
CDS-3UTR TCA 90 bp AGAACCAAATACTATGCCCCTTTCCCCGAGGCTCAGGCAGGAGGCGGTTCTGATAGCAGTGTCAGGCTCTaGGCCTGCGAGCTGAGGAGC +
Preference number: 4 (lower is better)
Translates to: RTKYYAPFPEAQAGGGSDSSVRL*ACELRS
Trigger: GCTCCTCAGCTCGCAGGCTCAGAGCCTGACACTGCT...ATCAGAACCGCCTCCTGCCTGAGCCTCGGGGAAAGGGGCATAGTATTTGGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585732.1
ENST00000647100.1
CDS-3UTR TCA 90 bp GCGTGGCAGGAGTCTGGTCGCCGGCGGAGCTTCTGGGAGCGCATCCGGTCACATTACCTGTTTCCCTATTaGTCATGGCTGTTCTCAGAG +
Preference number: 4 (lower is better)
Translates to: AWQESGRRRSFWERIRSHYLFPY*SWLFSE
Trigger: CTCTGAGAACAGCCATGATCAATAGGGAAACAGGTA...ATGTGACCGGATGCGCTCCCAGAAGCTCCGCCGGCGACCAGACTCCTGCCACGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
CDS-3UTR TCA 90 bp GGGTCAGAAACAACTGACCCTTTCTTGGCTGGGTCTGGACTCTGGAGTACAGGAGGAAGCGGTCCAGGGTaGACACGCTGGCCTCGTCCT +
Preference number: 4 (lower is better)
Translates to: GSETTDPFLAGSGLWSTGGSGPG*TRWPRP
Trigger: AGGACGAGGCCAGCGTGTTCACCCTGGACCGCTTCC...TCCTGTACTCCAGAGTCCAGACCCAGCCAAGAAAGGGTCAGTTGTTTCTGACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000587995.5
ENST00000644394.1
ENST00000645018.2
ENST00000646018.1
ENST00000646946.1
CDS-3UTR TCA 90 bp TTTTGGGATGGCTCTGGAAGGATCACCTTGCCAAAACACAGGTCAGGCTGGGTGGCCAGCAGGATGCTCTaGGGCCTGGCGGTACCACAG +
Preference number: 4 (lower is better)
Translates to: FWDGSGRITLPKHRSGWVASRML*GLAVPQ
Trigger: CTGTGGTACCGCCAGGCCTCAGAGCATCCTGCTGGC...CACCCAGCCTGACCTGTGTTTTGGCAAGGTGATCCTTCCAGAGCCATCCCAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000587995.5
ENST00000588077.5
ENST00000644394.1
ENST00000645018.2
ENST00000645225.1
ENST00000646018.1
ENST00000646946.1
CDS-3UTR TCA 90 bp GCTGCACCACAAATACCTTCTGGCAGGGCCCGCACTCCACGATCCCGTTGGCCTACCCGTTGTTGTCGATaGCGAAGCAGTCCAGATCAC +
Preference number: 4 (lower is better)
Translates to: AAPQIPSGRARTPRSRWPTRCCR*RSSPDH
Trigger: GTGATCTGGACTGCTTCGTCATCGACAACAACGGGT...AGGCCAACGGGATCGTGGAGTGCGGGCCCTGCCAGAAGGTATTTGTGGTGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000537923.5
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646946.1
ENST00000647066.1
CDS-3UTR TCA 90 bp GGGGTACTCCGTGTCGCAGGGCTGCAGCGGGTCCTGCTTCTTGTGTTTGTGGGAACCCGTTGTTGTCGATaGCGAAGCAGTCCAGATCAC +
Preference number: 4 (lower is better)
Translates to: GVLRVAGLQRVLLLVFVGTRCCR*RSSPDH
Trigger: GTGATCTGGACTGCTTCGTCATCGACAACAACGGGT...TCCCACAAACACAAGAAGCAGGACCCGCTGCAGCCCTGCGACACGGAGTACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000537923.5
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646946.1
ENST00000647066.1
CDS-3UTR TCA 90 bp ATTCTCCTCTGGATGGAAGGCGTGGCAGGAGTCTGGTCGCCGGCGGAGCTTCTGACCCGTTGTTGTCGATaGCGAAGCAGTCCAGATCAC +
Preference number: 4 (lower is better)
Translates to: ILLWMEGVAGVWSPAELLTRCCR*RSSPDH
Trigger: GTGATCTGGACTGCTTCGTCATCGACAACAACGGGT...CAGAAGCTCCGCCGGCGACCAGACTCCTGCCACGCCTTCCATCCAGAGGAGAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646946.1
CDS-3UTR TCA 90 bp GTGCCAGGTGATTGGTTTCCTGTTCCATCCAGCATTCTCCGGAGCCAGGGGCCAGCTGCACTGTGGTGGTaGCTCGAGGGTTTGCACATG +
Preference number: 4 (lower is better)
Translates to: VPGDWFPVPSSILRSQGPAALWW*LEGLHM
Trigger: CATGTGCAAACCCTCGAGTCACCACCACAGTGCAGC...TGGCCCCTGGCTCCGGAGAATGCTGGATGGAACAGGAAACCAATCACCTGGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000587995.5
ENST00000644394.1
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR TCA 90 bp GGGCATTCTCCTCTGGATGGAAGGCGTGGCAGGAGTCTGGTCGCCGGCGGAGCTCAGAGGCATTATATTTaGCTTCTGTCGCCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: GHSPLDGRRGRSLVAGGAQRHYI*LLSPPA
Trigger: TGCAGGAGGCGACAGAAGTCAAATATAATGCCTCTG...AGCTCCGCCGGCGACCAGACTCCTGCCACGCCTTCCATCCAGAGGAGAATGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000585385.5
ENST00000642253.1
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR TCA 90 bp GGGCATTCTCCTCTGGATGGAAGGCGTGGCAGGAGTCTGGTCGCCGGCGGAGCTCACCATGAAGCATCTTaGAAGTGGTGCCAGGTGATT +
Preference number: 4 (lower is better)
Translates to: GHSPLDGRRGRSLVAGGAHHEAS*KWCQVI
Trigger: AATCACCTGGCACCACTTTCAAGATGCTTCATGGTG...AGCTCCGCCGGCGACCAGACTCCTGCCACGCCTTCCATCCAGAGGAGAATGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR TCA 90 bp CCTGGGCATTCTCCTCTGGATGGAAGGCGTGGCAGGAGTCTGGTCGCCGGCGGACACCATGAAGCATCTTaGAAGTGGTGCCAGGTGATT +
Preference number: 4 (lower is better)
Translates to: PGHSPLDGRRGRSLVAGGHHEAS*KWCQVI
Trigger: AATCACCTGGCACCACTTTCAAGATGCTTCATGGTG...TCCGCCGGCGACCAGACTCCTGCCACGCCTTCCATCCAGAGGAGAATGCCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR TCA 90 bp CTGCAGCAGCCACCTGGTCGCCGTCAAGAAGGCAGAAATTGGGCTGACCAGGGGTGGTACCGGGCACCATaGAGCATCTTGAAAGTGGTG +
Preference number: 4 (lower is better)
Translates to: LQQPPGRRQEGRNWADQGWYRAP*SILKVV
Trigger: CACCACTTTCAAGATGCTTCATGGTGCCCGGTACCA...CCCCTGGTCAGCCCAATTTCTGCCTTCTTGACGGCGACCAGGTGGCTGCTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000444595.6
ENST00000537784.5
ENST00000545595.6
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR TCA 90 bp GTCCAAGCTGAGCTCACGCTGGCTTCCCGAAGAGGAGACAGGAAGGTTAGGTCACAGCAGCTAGGAAGGTaGGTGGCCTCCCACCATGAG +
Preference number: 4 (lower is better)
Translates to: VQAELTLASRRGDRKVRSQQLGR*VASHHE
Trigger: CTCATGGTGGGAGGCCACTCACCTTCCTAGCTGCTG...TGACCTAACCTTCCTGTCTCCTCTTCGGGAAGCCAGCGTGAGCTCAGCTTGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6
ENST00000644401.1
ENST00000645018.2
ENST00000646018.1
ENST00000646498.1
ENST00000646946.1
CDS-3UTR TCA 90 bp TGCAGCAGCCACCTGGTCGCCGTCAAGAAGGCAGAAATTGGGCTGACCAGGGGCACCCGTTGTTGTCGATaGCGAAGCAGTCCAGATCCT +
Preference number: 4 (lower is better)
Translates to: CSSHLVAVKKAEIGLTRGTRCCR*RSSPDP
Trigger: AGGATCTGGACTGCTTCGTCATCGACAACAACGGGT...GCCCCTGGTCAGCCCAATTTCTGCCTTCTTGACGGCGACCAGGTGGCTGCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545595.6
ENST00000646498.1
CDS-3UTR GCA 90 bp AAGCTCACACAGAACCAAATACTATGCCCCTTTCCCCGAGGCTCAGGCAGGAGGGGGGAATCCAGCGGCTaGTGGAGCTGGGGTTTGCGA +
Preference number: 4 (lower is better)
Translates to: KLTQNQILCPFPRGSGRRGESSG*WSWGLR
Trigger: TCGCAAACCCCAGCTCCAGCAGCCGCTGGATTCCCC...CCTCCTGCCTGAGCCTCGGGGAAAGGGGCATAGTATTTGGTTCTGTGTGAGCTT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000585732.1
ENST00000647100.1
CDS-3UTR GCA 90 bp CCTTCTTCCACAGACGTGTTCCCCAGAAGGATGTATTCTCCGTGGCCCCGGGACCCAGCTCCACGAAGTTaGCCTTCTCGTCCCTCTCGT +
Preference number: 4 (lower is better)
Translates to: PSSTDVFPRRMYSPWPRDPAPRS*PSRPSR
Trigger: ACGAGAGGGACGAGAAGGGCAACTTCGTGGAGCTGG...GTCCCGGGGCCACGGAGAATACATCCTTCTGGGGAACACGTCTGTGGAAGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
CDS-3UTR GCA 90 bp GTGCCAGGTGATTGGTTTCCTGTTCCATCCAGCATTCTCCGGAGCCAGGGGCCACCAGCTCCACGAAGTTaGCCTTCTCGTCCCTCTCGT +
Preference number: 4 (lower is better)
Translates to: VPGDWFPVPSSILRSQGPPAPRS*PSRPSR
Trigger: ACGAGAGGGACGAGAAGGGCAACTTCGTGGAGCTGG...TGGCCCCTGGCTCCGGAGAATGCTGGATGGAACAGGAAACCAATCACCTGGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000587995.5
ENST00000644394.1
ENST00000645018.2
ENST00000646018.1
CDS-3UTR GCA 90 bp ACCAAATACTATGCCCCTTTCCCCGAGGCTCAGGCAGGAGGCGGTTCTGATGCTACGTTGGTGGGCAGCTaGACGCTGCTGATGGAGGTG +
Preference number: 4 (lower is better)
Translates to: TKYYAPFPEAQAGGGSDATLVGS*TLLMEV
Trigger: CACCTCCATCAGCAGCGTGCAGCTGCCCACCAACGT...AGCATCAGAACCGCCTCCTGCCTGAGCCTCGGGGAAAGGGGCATAGTATTTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585732.1
ENST00000647100.1
CDS-3UTR GCA 90 bp CACGGGGTACTCCGTGTCGCAGGGCTGCAGCGGGTCCTGCTTCTTGTGTTTGTGTCAGCCCCTTCATACTaGCGCTCACGTCCACCAAAA +
Preference number: 4 (lower is better)
Translates to: HGVLRVAGLQRVLLLVFVSAPSY*RSRPPK
Trigger: TTTTGGTGGACGTGAGCGGCAGTATGAAGGGGCTGA...CACAAACACAAGAAGCAGGACCCGCTGCAGCCCTGCGACACGGAGTACCCCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
CDS-3UTR GCA 90 bp GGAGTCTGGTCGCCGGCGGAGCTTCTGGGAGCGCATCCGGTCACATTTGACAGATTGCAGAGGCTTCCTTaGTTGGCCTCTTGGAACTGC +
Preference number: 4 (lower is better)
Translates to: GVWSPAELLGAHPVTFDRLQRLP*LASWNC
Trigger: GCAGTTCCAAGAGGCCAAGCAAGGAAGCCTCTGCAA...TCTGTCAAATGTGACCGGATGCGCTCCCAGAAGCTCCGCCGGCGACCAGACTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
CDS-3UTR GCA 90 bp GGCCTCCCGGATGGCCGGCTGGTACACGAACACGGGGTACTCCGTGTCGCAGGGATGCAATCCACTTCATaGGGTCAGCAAAAGACACTT +
Preference number: 4 (lower is better)
Translates to: GLPDGRLVHEHGVLRVAGMQSTS*GQQKTL
Trigger: AAGTGTCTTTTGCTGACCGCATGAAGTGGATTGCAT...CCCTGCGACACGGAGTACCCCGTGTTCGTGTACCAGCCGGCCATCCGGGAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000444595.6
ENST00000646018.1
CDS-3UTR GCA 90 bp GACTTTTTGGGATGGCTCTGGAAGGATCACCTTGCCAAAACACAGGTCAGGCTGGGAGGCCAGCCCGGGTaGCCAGGAAGGCCATGTCCA +
Preference number: 4 (lower is better)
Translates to: DFLGWLWKDHLAKTQVRLGGQPG*PGRPCP
Trigger: TGGACATGGCCTTCCTGGGCACCCGGGCTGGCCTCC...CAGCCTGACCTGTGTTTTGGCAAGGTGATCCTTCCAGAGCCATCCCAAAAAGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000587995.5
ENST00000588077.5
ENST00000644394.1
ENST00000645018.2
ENST00000645225.1
ENST00000646018.1
ENST00000646946.1
CDS-3UTR GCA 90 bp ACAGAACCAAATACTATGCCCCTTTCCCCGAGGCTCAGGCAGGAGGCGGTTCTGAGCCCACGAACAAGCTaGTTCTCAGGAGGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: TEPNTMPLSPRLRQEAVLSPRTS*FSGGQP
Trigger: GGGCTGGCCTCCTGAGAAGCAGCTTGTTCGTGGGCT...CAGAACCGCCTCCTGCCTGAGCCTCGGGGAAAGGGGCATAGTATTTGGTTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585732.1
ENST00000647100.1
CDS-3UTR GCA 90 bp CCAAATACTATGCCCCTTTCCCCGAGGCTCAGGCAGGAGGCGGTTCTGATGCTTAAGCTGCCAGCAGGATaGTCTGAGGCCTGGCGGTAC +
Preference number: 4 (lower is better)
Translates to: PNTMPLSPRLRQEAVLMLKLPAG*SEAWRY
Trigger: GTACCGCCAGGCCTCAGAGCATCCTGCTGGCAGCTT...AAGCATCAGAACCGCCTCCTGCCTGAGCCTCGGGGAAAGGGGCATAGTATTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585732.1
ENST00000647100.1
CDS-3UTR GCA 90 bp CACACAGAACCAAATACTATGCCCCTTTCCCCGAGGCTCAGGCAGGAGGCGGTTAAGCTGCCAGCAGGATaGTCTGAGGCCTGGCGGTAC +
Preference number: 4 (lower is better)
Translates to: HTEPNTMPLSPRLRQEAVKLPAG*SEAWRY
Trigger: GTACCGCCAGGCCTCAGAGCATCCTGCTGGCAGCTT...AACCGCCTCCTGCCTGAGCCTCGGGGAAAGGGGCATAGTATTTGGTTCTGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585732.1
ENST00000647100.1
CDS-3UTR GCA 90 bp ACCAAATACTATGCCCCTTTCCCCGAGGCTCAGGCAGGAGGCGGTTCTGATGCTCGCCACAGCTGTGCTTaGCGTCACCACCATGGGTTC +
Preference number: 4 (lower is better)
Translates to: TKYYAPFPEAQAGGGSDARHSCA*RHHHGF
Trigger: GAACCCATGGTGGTGACGGCAAGCACAGCTGTGGCG...AGCATCAGAACCGCCTCCTGCCTGAGCCTCGGGGAAAGGGGCATAGTATTTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585732.1
ENST00000647100.1
CDS-3UTR GCA 90 bp TCCAAGCTGAGCTCACGCTGGCTTCCCGAAGAGGAGACAGGAAGGTTAGGTCAGCGCCACAGCTGTGCTTaGCGTCACCACCATGGGTTC +
Preference number: 4 (lower is better)
Translates to: SKLSSRWLPEEETGRLGQRHSCA*RHHHGF
Trigger: GAACCCATGGTGGTGACGGCAAGCACAGCTGTGGCG...CTGACCTAACCTTCCTGTCTCCTCTTCGGGAAGCCAGCGTGAGCTCAGCTTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000587995.5
ENST00000644394.1
ENST00000645018.2
ENST00000646018.1
ENST00000646946.1
CDS-3UTR GCA 90 bp GAGCTCACGCTGGCTTCCCGAAGAGGAGACAGGAAGGTTAGGTCAGAAGTATGCGCTGCACTGCCGCGTTaGCGCCCAGAATTTGCGCTG +
Preference number: 4 (lower is better)
Translates to: ELTLASRRGDRKVRSEVCAALPR*RPEFAL
Trigger: CAGCGCAAATTCTGGGCGGCAACGCGGCAGTGCAGC...GCATACTTCTGACCTAACCTTCCTGTCTCCTCTTCGGGAAGCCAGCGTGAGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000382722.10
ENST00000537784.5
ENST00000587995.5
ENST00000644394.1
ENST00000645018.2
ENST00000646946.1
CDS-3UTR GCA 90 bp TTGGGATGGCTCTGGAAGGATCACCTTGCCAAAACACAGGTCAGGCTGGGTGGTCCTCGCAGCTCTGTGTaGACGGCCCATCCACAGTGC +
Preference number: 4 (lower is better)
Translates to: LGWLWKDHLAKTQVRLGGPRSSV*TAHPQC
Trigger: GCACTGTGGATGGGCCGTGCACACAGAGCTGCGAGG...ACCACCCAGCCTGACCTGTGTTTTGGCAAGGTGATCCTTCCAGAGCCATCCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000585385.5
ENST00000587995.5
ENST00000588077.5
ENST00000642253.1
ENST00000644394.1
ENST00000645018.2
ENST00000645225.1
ENST00000646018.1
ENST00000646946.1
CDS-3UTR GCA 90 bp CTGGGGGCGACCCAACTGCAGTTAGCTGCATCCCATGTCAGTGCTGACTTTTTGCCTCGCAGCTCTGTGTaGACGGCCCATCCACAGTGC +
Preference number: 4 (lower is better)
Translates to: LGATQLQLAASHVSADFLPRSSV*TAHPQC
Trigger: GCACTGTGGATGGGCCGTGCACACAGAGCTGCGAGG...CAAAAAGTCAGCACTGACATGGGATGCAGCTAACTGCAGTTGGGTCGCCCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000585385.5
ENST00000587995.5
ENST00000642253.1
ENST00000644394.1
ENST00000645018.2
ENST00000646018.1
ENST00000646946.1
CDS-3UTR GCA 90 bp TTTGGGATGGCTCTGGAAGGATCACCTTGCCAAAACACAGGTCAGGCTGGGTGGTCCGTGTCGCAGGGCTaGAGCGGGTCCTGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: FGMALEGSPCQNTGQAGWSVSQG*SGSCFL
Trigger: CAAGAAGCAGGACCCGCTGCAGCCCTGCGACACGGA...CCACCCAGCCTGACCTGTGTTTTGGCAAGGTGATCCTTCCAGAGCCATCCCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000382722.10
ENST00000444595.6
ENST00000537784.5
ENST00000538450.5
ENST00000545595.6