RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CACNA1C (Homo sapiens)

Ensembl gene IDs: ENSG00000151067, ENSG00000285479

Ensembl transcript IDs: ENST00000327702.12, ENST00000335762.10, ENST00000335762.9, ENST00000344100.7, ENST00000347598.9, ENST00000399591.5, ENST00000399595.5, ENST00000399597.5, ENST00000399601.5, ENST00000399603.6, ENST00000399606.5, ENST00000399617.5, ENST00000399617.6, ENST00000399621.5, ENST00000399629.5, ENST00000399634.5, ENST00000399634.6, ENST00000399637.5, ENST00000399638.5, ENST00000399641.6, ENST00000399644.5, ENST00000399649.5, ENST00000399655.6, ENST00000402845.7, ENST00000406454.7, ENST00000406454.8, ENST00000465278.3, ENST00000465934.1, ENST00000480911.6, ENST00000483136.1, ENST00000491104.2, ENST00000492150.2, ENST00000496818.3, ENST00000541871.1, ENST00000616390.1, ENST00000642375.2, ENST00000642396.1, ENST00000642583.1, ENST00000642774.1, ENST00000643038.2, ENST00000643138.1, ENST00000643145.1, ENST00000643213.1, ENST00000643528.1, ENST00000643701.1, ENST00000643730.1, ENST00000643858.1, ENST00000644048.1, ENST00000644235.2, ENST00000644343.1, ENST00000644369.2, ENST00000644660.1, ENST00000644691.1, ENST00000644891.1, ENST00000645133.1, ENST00000645584.1, ENST00000645965.1, ENST00000646257.1, ENST00000646280.1, ENST00000646455.1, ENST00000646676.2, ENST00000647024.1, ENST00000647062.1, ENST00000647229.1, ENST00000647327.2, ENST00000647521.1, ENST00000672080.1, ENST00000672721.1, ENST00000672806.1, ENST00000673589.2, ENST00000682152.1, ENST00000682320.1, ENST00000682336.1, ENST00000682462.1, ENST00000682544.1, ENST00000682686.1, ENST00000682835.1, ENST00000682867.1, ENST00000683482.1, ENST00000683781.1, ENST00000683824.1, ENST00000683840.1, ENST00000683956.1, ENST00000684233.1, ENST00000684317.1, ENST00000684467.1, ENST00000684752.1

Found 5759 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCTTCCTCGCGCCCCGGGACCCTCGCCGCCTCCTCTCCCCGCCTCTaGAGACGCAGCCGGGCGCCTTCCTCCCGGAGGGCGGCTCGCGCA +
Preference number: 1 (lower is better)
Translates to: PSSRPGTLAASSPRL*RRSRAPSSRRAARA
Trigger: TGCGCGAGCCGCCCTCCGGGAGGAAGGCGCCCGGCTGCGTCTGCAGAGGCGGGGAGAGGAGGCGGCGAGGGTCCCGGGGCGCGAGGAAGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399617.5
ENST00000399634.5
ENST00000399641.6
ENST00000399655.6
ENST00000406454.7
ENST00000642375.2
ENST00000643038.2
ENST00000643528.1
ENST00000643730.1
ENST00000644235.2
ENST00000644369.2
ENST00000646280.1
ENST00000647327.2
3UTR CCA 90 bp CCGTGCTTGGGACCATCCCAGCCGGGCTTGCACACCGTGCCGTTCTaGCACTGCCGCCCGTGGCCCGTTTCCAGCGCACAAGGGGAAGGG +
Preference number: 1 (lower is better)
Translates to: PCLGPSQPGLHTVPF*HCRPWPVSSAQGEG
Trigger: CCCTTCCCCTTGTGCGCTGGAAACGGGCCACGGGCGGCAGTGCCAGAACGGCACGGTGTGCAAGCCCGGCTGGGATGGTCCCAAGCACGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672721.1
ENST00000672806.1
3UTR CCA 90 bp TCCCAGCCGGGCTTGCACACCGTGCCGTTCTGGCACTGCCGCCCGTaGCCCGTTTCCAGCGCACAAGGGGAAGGGTCATCTTCTGCTGGA +
Preference number: 1 (lower is better)
Translates to: SQPGLHTVPFWHCRP*PVSSAQGEGSSSAG
Trigger: TCCAGCAGAAGATGACCCTTCCCCTTGTGCGCTGGAAACGGGCCACGGGCGGCAGTGCCAGAACGGCACGGTGTGCAAGCCCGGCTGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672721.1
ENST00000672806.1
3UTR GCA 90 bp GCTCGGCTAGGCAGTGACTGCACTCCTGGCCTCAGCTGGTCATGCTaGTGTGGGTGGCGAACTGTCAGAGCTCCTGGGCTGCAGGGCTTG +
Preference number: 1 (lower is better)
Translates to: ARLGSDCTPGLSWSC*CGWRTVRAPGLQGL
Trigger: CAAGCCCTGCAGCCCAGGAGCTCTGACAGTTCGCCACCCACAGCAGCATGACCAGCTGAGGCCAGGAGTGCAGTCACTGCCTAGCCGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR TCA 90 bp GGCACTTCCTTCTGCAGAACCGATTCCACCGGCGCCAGTAGCGGCTaGACTTTGACTTGGAGATCCGGTGGGCCAGCCTGGCCCCGCAGT +
Preference number: 1 (lower is better)
Translates to: GTSFCRTDSTGASSG*TLTWRSGGPAWPRS
Trigger: ACTGCGGGGCCAGGCTGGCCCACCGGATCTCCAAGTCAAAGTTCAGCCGCTACTGGCGCCGGTGGAATCGGTTCTGCAGAAGGAAGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR CCA 90 bp GAGACTGAGGCTCGGCTAGGCAGTGACTGCACTCCTGGCCTCAGCTaGTCATGCTGCTGTGGGTGGCGAACTGTCAGAGCTCCTGGGCTG +
Preference number: 1 (lower is better)
Translates to: ETEARLGSDCTPGLS*SCCCGWRTVRAPGL
Trigger: CAGCCCAGGAGCTCTGACAGTTCGCCACCCACAGCAGCATGACCAGCTGAGGCCAGGAGTGCAGTCACTGCCTAGCCGAGCCTCAGTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR CCA 90 bp CCTCAGCTGGTCATGCTGCTGTGGGTGGCGAACTGTCAGAGCTCCTaGGCTGCAGGGCTTGGAATAGGACCATGTGTGGGCACAGACACC +
Preference number: 1 (lower is better)
Translates to: PQLVMLLWVANCQSS*AAGLGIGPCVGTDT
Trigger: GGTGTCTGTGCCCACACATGGTCCTATTCCAAGCCCTGCAGCCCAGGAGCTCTGACAGTTCGCCACCCACAGCAGCATGACCAGCTGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR CCA 90 bp GTTTCCTGGAGTTGGCCTGGTTCAGCTCTGGGCAGGTGTAGGAGTTaGGGCACTGACCATCGGAGCAGGGATGGTCCTTCACCGATGCCT +
Preference number: 1 (lower is better)
Translates to: VSWSWPGSALGRCRS*GTDHRSRDGPSPMP
Trigger: AGGCATCGGTGAAGGACCATCCCTGCTCCGATGGTCAGTGCCCCAACTCCTACACCTGCCCAGAGCTGAACCAGGCCAACTCCAGGAAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR TCA 90 bp AGGGCGGCTCGCGCACCCAGGCTCCGCGTCTGGTCCCAACAGAAATaGATGAAGACGCTGTTCCGGTTAACTCCAGGTCACGAGAACAGT +
Preference number: 1 (lower is better)
Translates to: RAARAPRLRVWSQQK*MKTLFRLTPGHENS
Trigger: ACTGTTCTCGTGACCTGGAGTTAACCGGAACAGCGTCTTCATTCATTTCTGTTGGGACCAGACGCGGAGCCTGGGTGCGCGAGCCGCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000327702.12
ENST00000335762.9
ENST00000347598.9
ENST00000399603.6
ENST00000399617.5
ENST00000399634.5
ENST00000399641.6
ENST00000399655.6
ENST00000406454.7
ENST00000642375.2
ENST00000643038.2
ENST00000643528.1
ENST00000643730.1
ENST00000644235.2
ENST00000644369.2
ENST00000646280.1
ENST00000647229.1
ENST00000647327.2
3UTR GCA 90 bp GTGCACGGGCACATGGTGTGGGTGCATATACACGGGCAGGACATATaGACACAGACAACCCACCACACACACACGCGTCGCACACACTCG +
Preference number: 1 (lower is better)
Translates to: VHGHMVWVHIHGQDI*TQTTHHTHTRRTHS
Trigger: CGAGTGTGTGCGACGCGTGTGTGTGTGGTGGGTTGTCTGTGTGCATATGTCCTGCCCGTGTATATGCACCCACACCATGTGCCCGTGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR GCA 90 bp CATCTACAGAGGCCCAGGGTGGAAGGTGTGGCTCATACCAGTGTCTaGTCCTCCACCACTGAGGACAATGGGGGTGACTGGCTAGGAAGG +
Preference number: 1 (lower is better)
Translates to: HLQRPRVEGVAHTSV*SSTTEDNGGDWLGR
Trigger: CCTTCCTAGCCAGTCACCCCCATTGTCCTCAGTGGTGGAGGAGCAGACACTGGTATGAGCCACACCTTCCACCCTGGGCCTCTGTAGATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR CCA 90 bp GTGAAGCTCAGAGAGTGGTCGTGGGCGAGGGCCGACAGGCATCTCTaGCTCCTCCTCATCCTCTTCTCCTGTAGTTTCTGGGTTGGGGTA +
Preference number: 1 (lower is better)
Translates to: VKLREWSWARADRHL*LLLILFSCSFWVGV
Trigger: TACCCCAACCCAGAAACTACAGGAGAAGAGGATGAGGAGGAGCCAGAGATGCCTGTCGGCCCTCGCCCACGACCACTCTCTGAGCTTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR CCA 90 bp CATGGGCACTGCCTTTTCCTTAAGGTGAAGCTCAGAGAGTGGTCGTaGGCGAGGGCCGACAGGCATCTCTGGCTCCTCCTCATCCTCTTC +
Preference number: 1 (lower is better)
Translates to: HGHCLFLKVKLREWS*ARADRHLWLLLILF
Trigger: GAAGAGGATGAGGAGGAGCCAGAGATGCCTGTCGGCCCTCGCCCACGACCACTCTCTGAGCTTCACCTTAAGGAAAAGGCAGTGCCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR CCA 90 bp TTCTGGCATGGGCACTGCCTTTTCCTTAAGGTGAAGCTCAGAGAGTaGTCGTGGGCGAGGGCCGACAGGCATCTCTGGCTCCTCCTCATC +
Preference number: 1 (lower is better)
Translates to: FWHGHCLFLKVKLRE*SWARADRHLWLLLI
Trigger: GATGAGGAGGAGCCAGAGATGCCTGTCGGCCCTCGCCCACGACCACTCTCTGAGCTTCACCTTAAGGAAAAGGCAGTGCCCATGCCAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR TCA 90 bp CTTCCCAGGGAAGGTTGTCTGTATGTCTCCCGTGCTCAGGAGGCATaGTTCAGAAAGTCCACTGCAGGCTCTCCAGACTGCCTCAGACAT +
Preference number: 1 (lower is better)
Translates to: LPREGCLYVSRAQEA*FRKSTAGSPDCLRH
Trigger: ATGTCTGAGGCAGTCTGGAGAGCCTGCAGTGGACTTTCTGAATCATGCCTCCTGAGCACGGGAGACATACAGACAACCTTCCCTGGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR GCA 90 bp TGTCTTTTAGACGGAGGACGGAGGCTCCTGCAGGTGTCAATTTCATaGACTTCCCAGGGAAGGTTGTCTGTATGTCTCCCGTGCTCAGGA +
Preference number: 1 (lower is better)
Translates to: CLLDGGRRLLQVSIS*TSQGRLSVCLPCSG
Trigger: TCCTGAGCACGGGAGACATACAGACAACCTTCCCTGGGAAGTGCATGAAATTGACACCTGCAGGAGCCTCCGTCCTCCGTCTAAAAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR CCA 90 bp TCTCTTGTGACTCTACAGGAGAGACTTCTCTTTTCTCCTGGCCAATaGCCAGGAGAGGTTTCTTCAAGGGGGTCCCTGAAACCTGCAGCC +
Preference number: 1 (lower is better)
Translates to: SLVTLQERLLFSPGQ*PGEVSSRGSLKPAA
Trigger: GGCTGCAGGTTTCAGGGACCCCCTTGAAGAAACCTCTCCTGGCCATTGGCCAGGAGAAAAGAGAAGTCTCTCCTGTAGAGTCACAAGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR CCA 90 bp CATACCAGTGTCTGCTCCTCCACCACTGAGGACAATGGGGGTGACTaGCTAGGAAGGGCACAGATGATCCAAAGAACAGGAATTCTGACC +
Preference number: 1 (lower is better)
Translates to: HTSVCSSTTEDNGGD*LGRAQMIQRTGILT
Trigger: GGTCAGAATTCCTGTTCTTTGGATCATCTGTGCCCTTCCTAGCCAGTCACCCCCATTGTCCTCAGTGGTGGAGGAGCAGACACTGGTATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR TCA 90 bp CAGTGCCCTTTCTGGGATCCCTACAAAGTCAAATTCCTTAGATCCTaGGAAGTGGAGTGCATGGGATGCCCTGAAAAGGTGGGGGTGTCC +
Preference number: 1 (lower is better)
Translates to: QCPFWDPYKVKFLRS*EVECMGCPEKVGVS
Trigger: GGACACCCCCACCTTTTCAGGGCATCCCATGCACTCCACTTCTCAGGATCTAAGGAATTTGACTTTGTAGGGATCCCAGAAAGGGCACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR GCA 90 bp TCTGTATGTCTCCCGTGCTCAGGAGGCATGATTCAGAAAGTCCACTaGAGGCTCTCCAGACTGCCTCAGACATCGTCAGAAACACATCTG +
Preference number: 1 (lower is better)
Translates to: SVCLPCSGGMIQKVH*RLSRLPQTSSETHL
Trigger: CAGATGTGTTTCTGACGATGTCTGAGGCAGTCTGGAGAGCCTGCAGTGGACTTTCTGAATCATGCCTCCTGAGCACGGGAGACATACAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR CCA 90 bp GAACTCGTTCCTTCTCATCCTTCTCCAAAAGGTGTTATGGTAGCCTaGGGGCTGCTCAGTTGCTCTTATAGCCTCCCTCAGAAGCAGCTG +
Preference number: 1 (lower is better)
Translates to: ELVPSHPSPKGVMVA*GLLSCSYSLPQKQL
Trigger: CAGCTGCTTCTGAGGGAGGCTATAAGAGCAACTGAGCAGCCCCCAGGCTACCATAACACCTTTTGGAGAAGGATGAGAAGGAACGAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR TCA 90 bp GATGCCCTGAAAAGGTGGGGGTGTCCCTGTGTAGCAGCCAGTAACTaGTCTGAAGGGAGAGGACTTGGCTCTGGTGATGTAACATTTCAA +
Preference number: 1 (lower is better)
Translates to: DALKRWGCPCVAASN*SEGRGLGSGDVTFQ
Trigger: TTGAAATGTTACATCACCAGAGCCAAGTCCTCTCCCTTCAGATCAGTTACTGGCTGCTACACAGGGACACCCCCACCTTTTCAGGGCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR GCA 90 bp TCAATTTCATGCACTTCCCAGGGAAGGTTGTCTGTATGTCTCCCGTaGTCAGGAGGCATGATTCAGAAAGTCCACTGCAGGCTCTCCAGA +
Preference number: 1 (lower is better)
Translates to: SISCTSQGRLSVCLP*SGGMIQKVHCRLSR
Trigger: TCTGGAGAGCCTGCAGTGGACTTTCTGAATCATGCCTCCTGAGCACGGGAGACATACAGACAACCTTCCCTGGGAAGTGCATGAAATTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR CCA 90 bp ATCCCTACAAAGTCAAATTCCTTAGATCCTGAGAAGTGGAGTGCATaGGATGCCCTGAAAAGGTGGGGGTGTCCCTGTGTAGCAGCCAGT +
Preference number: 1 (lower is better)
Translates to: IPTKSNSLDPEKWSA*DALKRWGCPCVAAS
Trigger: ACTGGCTGCTACACAGGGACACCCCCACCTTTTCAGGGCATCCCATGCACTCCACTTCTCAGGATCTAAGGAATTTGACTTTGTAGGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR GCA 90 bp ACTTTCAGATGGATCAGGGTTTCACCAGTTCCTTTCTCGAGCCCCTaGTGTCCTTGTTGGGTAGAGCAACAAGAATCCGGAAGTGAGGAT +
Preference number: 1 (lower is better)
Translates to: TFRWIRVSPVPFSSP*CPCWVEQQESGSED
Trigger: ATCCTCACTTCCGGATTCTTGTTGCTCTACCCAACAAGGACAGCAGGGGCTCGAGAAAGGAACTGGTGAAACCCTGATCCATCTGAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR CCA 90 bp CTTTCTGGGATCCCTACAAAGTCAAATTCCTTAGATCCTGAGAAGTaGAGTGCATGGGATGCCCTGAAAAGGTGGGGGTGTCCCTGTGTA +
Preference number: 1 (lower is better)
Translates to: LSGIPTKSNSLDPEK*SAWDALKRWGCPCV
Trigger: TACACAGGGACACCCCCACCTTTTCAGGGCATCCCATGCACTCCACTTCTCAGGATCTAAGGAATTTGACTTTGTAGGGATCCCAGAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR TCA 90 bp CCAGTTCTTAGCAGTGGATCAATTAATCCTGGGCACTTAATTGTTTaGGCCTCCCTTCCCCCTTCTCCACAGAGGGATGCTAATACCTAC +
Preference number: 1 (lower is better)
Translates to: PVLSSGSINPGHLIV*ASLPPSPQRDANTY
Trigger: GTAGGTATTAGCATCCCTCTGTGGAGAAGGGGGAAGGGAGGCTCAAACAATTAAGTGCCCAGGATTAATTGATCCACTGCTAAGAACTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR TCA 90 bp CCACCGTTCTATCACCAAAGGATGTCCCTTAGGAGACTTCCTCTATaGAAATCAGCTGGGATCCCCAGGCATTCTTTGAGTGACAGAAGA +
Preference number: 1 (lower is better)
Translates to: PPFYHQRMSLRRLPL*KSAGIPRHSLSDRR
Trigger: TCTTCTGTCACTCAAAGAATGCCTGGGGATCCCAGCTGATTTTCATAGAGGAAGTCTCCTAAGGGACATCCTTTGGTGATAGAACGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR TCA 90 bp GTCAGGACAAGATCTGTCCTCCTAAATGGGACTTGTACAGGAAGGTaGAAAAGAGTGTACTTGCTTCTCTGGAGAAGGCAGGAAACCACC +
Preference number: 1 (lower is better)
Translates to: VRTRSVLLNGTCTGR*KRVYLLLWRRQETT
Trigger: GGTGGTTTCCTGCCTTCTCCAGAGAAGCAAGTACACTCTTTTTCACCTTCCTGTACAAGTCCCATTTAGGAGGACAGATCTTGTCCTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR CCA 90 bp CACCATAGATGTACCCTGGAATGTGAAATGCAAATGGGCCCAGGATaGCTGTCTTCCTTCTTGGGTAAAAGTCTCTGTTATCTTGCCCCA +
Preference number: 1 (lower is better)
Translates to: HHRCTLECEMQMGPG*LSSFLGKSLCYLAP
Trigger: TGGGGCAAGATAACAGAGACTTTTACCCAAGAAGGAAGACAGCCATCCTGGGCCCATTTGCATTTCACATTCCAGGGTACATCTATGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR GCA 90 bp AGGGGAAGGCTCAGTAAGCTGGAGAGATTGTCTCAAGTCTGTAACTaGATGATGCTCCTAGAACTCGTTCCTTCTCATCCTTCTCCAAAA +
Preference number: 1 (lower is better)
Translates to: RGRLSKLERLSQVCN*MMLLELVPSHPSPK
Trigger: TTTTGGAGAAGGATGAGAAGGAACGAGTTCTAGGAGCATCATGCAGTTACAGACTTGAGACAATCTCTCCAGCTTACTGAGCCTTCCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR CCA 90 bp TTCAGGTCATGGTTAGAAGCCACTGGTTCTTGGGCCAGATCCAGCTaGATATTCTTCCAGAGCTTCAAGTTTTTCCAGTTTGGTTTTCTG +
Preference number: 1 (lower is better)
Translates to: FRSWLEATGSWARSS*IFFQSFKFFQFGFL
Trigger: CAGAAAACCAAACTGGAAAAACTTGAAGCTCTGGAAGAATATCCAGCTGGATCTGGCCCAAGAACCAGTGGCTTCTAACCATGACCTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR CCA 90 bp TCCTACTTAATGGTGGGAAATGAAAGTTGTCATGGATTCAGGTCATaGTTAGAAGCCACTGGTTCTTGGGCCAGATCCAGCTGGATATTC +
Preference number: 1 (lower is better)
Translates to: SYLMVGNESCHGFRS*LEATGSWARSSWIF
Trigger: GAATATCCAGCTGGATCTGGCCCAAGAACCAGTGGCTTCTAACCATGACCTGAATCCATGACAACTTTCATTTCCCACCATTAAGTAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR CCA 90 bp CTTTCTCTTTACACCATAGATGTACCCTGGAATGTGAAATGCAAATaGGCCCAGGATGGCTGTCTTCCTTCTTGGGTAAAAGTCTCTGTT +
Preference number: 1 (lower is better)
Translates to: LSLYTIDVPWNVKCK*AQDGCLPSWVKVSV
Trigger: AACAGAGACTTTTACCCAAGAAGGAAGACAGCCATCCTGGGCCCATTTGCATTTCACATTCCAGGGTACATCTATGGTGTAAAGAGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR GCA 90 bp ATTTTCCTTTCTCTTTACACCATAGATGTACCCTGGAATGTGAAATaGAAATGGGCCCAGGATGGCTGTCTTCCTTCTTGGGTAAAAGTC +
Preference number: 1 (lower is better)
Translates to: IFLSLYTIDVPWNVK*KWAQDGCLPSWVKV
Trigger: GACTTTTACCCAAGAAGGAAGACAGCCATCCTGGGCCCATTTGCATTTCACATTCCAGGGTACATCTATGGTGTAAAGAGAAAGGAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR CCA 90 bp CTAATACCCTACAAAGACCATGGATCTTTGCCACTTCAGGTGCTGTaGCTCAAACCTCTTAAAGTCATCCCAGGAAAAAGTGTTGATTGT +
Preference number: 1 (lower is better)
Translates to: LIPYKDHGSLPLQVL*LKPLKVIPGKSVDC
Trigger: ACAATCAACACTTTTTCCTGGGATGACTTTAAGAGGTTTGAGCCACAGCACCTGAAGTGGCAAAGATCCATGGTCTTTGTAGGGTATTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR CCA 90 bp TTAGAAATGAATGTACAATGTATGTCTGATTCACACCAGGGGAAGTaGCACAGTGCCCTTTCTGGGATCCCTACAAAGTCAAATTCCTTA +
Preference number: 1 (lower is better)
Translates to: LEMNVQCMSDSHQGK*HSALSGIPTKSNSL
Trigger: TAAGGAATTTGACTTTGTAGGGATCCCAGAAAGGGCACTGTGCCACTTCCCCTGGTGTGAATCAGACATACATTGTACATTCATTTCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR GCA 90 bp AAATCAGCTGGGATCCCCAGGCATTCTTTGAGTGACAGAAGAATCTaGATTGTAGGAATATTGTCTTATCTTTTAAGTCCCTCCAAGGTT +
Preference number: 1 (lower is better)
Translates to: KSAGIPRHSLSDRRI*IVGILSYLLSPSKV
Trigger: AACCTTGGAGGGACTTAAAAGATAAGACAATATTCCTACAATGCAGATTCTTCTGTCACTCAAAGAATGCCTGGGGATCCCAGCTGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR TCA 90 bp CCTATTGGATTAAGAAGAAGGAAAGGGGTTATAACTAGTACCTTCTaGATCAAAGCTGGGAAAAATTCTCCAAGGTCTGGAAATGAAAGA +
Preference number: 1 (lower is better)
Translates to: PIGLRRRKGVITSTF*IKAGKNSPRSGNER
Trigger: TCTTTCATTTCCAGACCTTGGAGAATTTTTCCCAGCTTTGATTCAGAAGGTACTAGTTATAACCCCTTTCCTTCTTCTTAATCCAATAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR GCA 90 bp CCGGGGCCTGCGAGCTGGGAGAGGGCAGGCGCCTTCCTCGCGCCCCGGGACCCTTCCTCTCCCCGCCTCTaGAGACGCAGCCGGGCGCCT +
Preference number: 2 (lower is better)
Translates to: PGPASWERAGAFLAPRDPSSPRL*RRSRAP
Trigger: AGGCGCCCGGCTGCGTCTGCAGAGGCGGGGAGAGGA...AGGGTCCCGGGGCGCGAGGAAGGCGCCTGCCCTCTCCCAGCTCGCAGGCCCCGG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 16 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399617.5
ENST00000399634.5
ENST00000399641.6
ENST00000399655.6
ENST00000406454.7
ENST00000642375.2
ENST00000643038.2
ENST00000643528.1
ENST00000643730.1
ENST00000644235.2
ENST00000644369.2
ENST00000646280.1
ENST00000647327.2
3UTR-3UTR GCA 90 bp TGGCCGGGAGCTCGGCGTGGCCCGTGCCGGTCGGGGGATCCCGTCGCAGGTGGGTCCTCTCCCCGCCTCTaGAGACGCAGCCGGGCGCCT +
Preference number: 2 (lower is better)
Translates to: WPGARRGPCRSGDPVAGGSSPRL*RRSRAP
Trigger: AGGCGCCCGGCTGCGTCTGCAGAGGCGGGGAGAGGA...CCCACCTGCGACGGGATCCCCCGACCGGCACGGGCCACGCCGAGCTCCCGGCCA
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399617.5
ENST00000399634.5
ENST00000399641.6
ENST00000399655.6
ENST00000406454.7
ENST00000642375.2
ENST00000643038.2
ENST00000643528.1
ENST00000643730.1
ENST00000644235.2
ENST00000644369.2
ENST00000646280.1
ENST00000647327.2
3UTR-3UTR GCA 90 bp GGCTGGCCGGGAGCTCGGCGTGGCCCGTGCCGGTCGGGGGATCCCGTCGCAGGTTCCTCTCCCCGCCTCTaGAGACGCAGCCGGGCGCCT +
Preference number: 2 (lower is better)
Translates to: GWPGARRGPCRSGDPVAGSSPRL*RRSRAP
Trigger: AGGCGCCCGGCTGCGTCTGCAGAGGCGGGGAGAGGA...ACCTGCGACGGGATCCCCCGACCGGCACGGGCCACGCCGAGCTCCCGGCCAGCC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399617.5
ENST00000399634.5
ENST00000399641.6
ENST00000399655.6
ENST00000406454.7
ENST00000642375.2
ENST00000643038.2
ENST00000643528.1
ENST00000643730.1
ENST00000644235.2
ENST00000644369.2
ENST00000646280.1
ENST00000647327.2
3UTR-3UTR GCA 90 bp CTGGCCGGGAGCTCGGCGTGGCCCGTGCCGGTCGGGGGATCCCGTCGCAGGTGGAGTGAGCCGCACCACTaGCGGCCCGACGCCCATCCC +
Preference number: 2 (lower is better)
Translates to: LAGSSAWPVPVGGSRRRWSEPHH*RPDAHP
Trigger: GGGATGGGCGTCGGGCCGGCAGTGGTGCGGCTCACT...CCACCTGCGACGGGATCCCCCGACCGGCACGGGCCACGCCGAGCTCCCGGCCAG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 16 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399617.5
ENST00000399634.5
ENST00000399641.6
ENST00000399655.6
ENST00000406454.7
ENST00000642375.2
ENST00000643038.2
ENST00000643528.1
ENST00000643730.1
ENST00000644235.2
ENST00000644369.2
ENST00000646280.1
ENST00000647327.2
3UTR-3UTR CCA 90 bp GGAGCTCGGCGTGGCCCGTGCCGGTCGGGGGATCCCGTCGCAGGTGGGCAGGGACCGGGGCCTGCGAGCTaGGAGAGGGCAGGCGCCTTC +
Preference number: 2 (lower is better)
Translates to: GARRGPCRSGDPVAGGQGPGPAS*ERAGAF
Trigger: GAAGGCGCCTGCCCTCTCCCAGCTCGCAGGCCCCGG...TCCCTGCCCACCTGCGACGGGATCCCCCGACCGGCACGGGCCACGCCGAGCTCC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399617.5
ENST00000399634.5
ENST00000399641.6
ENST00000399655.6
ENST00000406454.7
ENST00000642375.2
ENST00000643038.2
ENST00000643528.1
ENST00000643730.1
ENST00000644235.2
ENST00000644369.2
ENST00000646280.1
ENST00000647327.2
3UTR-3UTR TCA 90 bp GGCTGGCCGGGAGCTCGGCGTGGCCCGTGCCGGTCGGGGGATCCCGTCGCAGGTGTAGGGTCCTTTTGGTaGGGGCGCGCGGGAAGCCGG +
Preference number: 2 (lower is better)
Translates to: GWPGARRGPCRSGDPVAGVGSFW*GRAGSR
Trigger: CCGGCTTCCCGCGCGCCCTCACCAAAAGGACCCTAC...ACCTGCGACGGGATCCCCCGACCGGCACGGGCCACGCCGAGCTCCCGGCCAGCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 16 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399617.5
ENST00000399634.5
ENST00000399641.6
ENST00000399655.6
ENST00000406454.7
ENST00000642375.2
ENST00000643038.2
ENST00000643528.1
ENST00000643730.1
ENST00000644235.2
ENST00000644369.2
ENST00000646280.1
ENST00000647327.2
3UTR-3UTR TCA 90 bp TGGCCGGGAGCTCGGCGTGGCCCGTGCCGGTCGGGGGATCCCGTCGCAGGTGGGGTAGGGTCCTTTTGGTaGGGGCGCGCGGGAAGCCGG +
Preference number: 2 (lower is better)
Translates to: WPGARRGPCRSGDPVAGGVGSFW*GRAGSR
Trigger: CCGGCTTCCCGCGCGCCCTCACCAAAAGGACCCTAC...CCCACCTGCGACGGGATCCCCCGACCGGCACGGGCCACGCCGAGCTCCCGGCCA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 16 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399617.5
ENST00000399634.5
ENST00000399641.6
ENST00000399655.6
ENST00000406454.7
ENST00000642375.2
ENST00000643038.2
ENST00000643528.1
ENST00000643730.1
ENST00000644235.2
ENST00000644369.2
ENST00000646280.1
ENST00000647327.2
3UTR-3UTR TCA 90 bp CGCACCACTGCCGGCCCGACGCCCATCCCCAGAGCTCCGCGCCCCTGGAGGCCTGTAGGGTCCTTTTGGTaGGGGCGCGCGGGAAGCCGG +
Preference number: 2 (lower is better)
Translates to: RTTAGPTPIPRAPRPWRPVGSFW*GRAGSR
Trigger: CCGGCTTCCCGCGCGCCCTCACCAAAAGGACCCTAC...AGGCCTCCAGGGGCGCGGAGCTCTGGGGATGGGCGTCGGGCCGGCAGTGGTGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 16 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399617.5
ENST00000399634.5
ENST00000399641.6
ENST00000399655.6
ENST00000406454.7
ENST00000642375.2
ENST00000643038.2
ENST00000643528.1
ENST00000643730.1
ENST00000644235.2
ENST00000644369.2
ENST00000646280.1
ENST00000647327.2
3UTR-3UTR TCA 90 bp GGAGCTCGGCGTGGCCCGTGCCGGTCGGGGGATCCCGTCGCAGGTGGGCAGGGAGTAGGGTCCTTTTGGTaGGGGCGCGCGGGAAGCCGG +
Preference number: 2 (lower is better)
Translates to: GARRGPCRSGDPVAGGQGVGSFW*GRAGSR
Trigger: CCGGCTTCCCGCGCGCCCTCACCAAAAGGACCCTAC...TCCCTGCCCACCTGCGACGGGATCCCCCGACCGGCACGGGCCACGCCGAGCTCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 16 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399617.5
ENST00000399634.5
ENST00000399641.6
ENST00000399655.6
ENST00000406454.7
ENST00000642375.2
ENST00000643038.2
ENST00000643528.1
ENST00000643730.1
ENST00000644235.2
ENST00000644369.2
ENST00000646280.1
ENST00000647327.2
3UTR-3UTR CCA 90 bp GAGCGCTCAGCGGAAGCTCAGCACCACCTGGTTGGGCGGAGCCGGCGGCGCAGCCCGGGGCCTGCGAGCTaGGAGAGGGCAGGCGCCTTC +
Preference number: 2 (lower is better)
Translates to: ERSAEAQHHLVGRSRRRSPGPAS*ERAGAF
Trigger: GAAGGCGCCTGCCCTCTCCCAGCTCGCAGGCCCCGG...GCTGCGCCGCCGGCTCCGCCCAACCAGGTGGTGCTGAGCTTCCGCTGAGCGCTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399617.5
ENST00000399634.5
ENST00000399641.6
ENST00000399655.6
ENST00000406454.7
ENST00000642375.2
ENST00000643038.2
ENST00000643528.1
ENST00000643730.1
ENST00000644235.2
ENST00000644369.2
ENST00000646280.1
ENST00000647327.2
3UTR-3UTR CCA 90 bp CTGGCCGGGAGCTCGGCGTGGCCCGTGCCGGTCGGGGGATCCCGTCGCAGGTGGCTCTCCGGGCCGGGTTaGGGTCCTCCTGGAAGTCCT +
Preference number: 2 (lower is better)
Translates to: LAGSSAWPVPVGGSRRRWLSGPG*GPPGSP
Trigger: AGGACTTCCAGGAGGACCCCAACCCGGCCCGGAGAG...CCACCTGCGACGGGATCCCCCGACCGGCACGGGCCACGCCGAGCTCCCGGCCAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 16 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399617.5
ENST00000399634.5
ENST00000399641.6
ENST00000399655.6
ENST00000406454.7
ENST00000642375.2
ENST00000643038.2
ENST00000643528.1
ENST00000643730.1
ENST00000644235.2
ENST00000644369.2
ENST00000646280.1
ENST00000647327.2
3UTR-3UTR CCA 90 bp TGGCCGGGAGCTCGGCGTGGCCCGTGCCGGTCGGGGGATCCCGTCGCAGGTGGGCTCTCCGGGCCGGGTTaGGGTCCTCCTGGAAGTCCT +
Preference number: 2 (lower is better)
Translates to: WPGARRGPCRSGDPVAGGLSGPG*GPPGSP
Trigger: AGGACTTCCAGGAGGACCCCAACCCGGCCCGGAGAG...CCCACCTGCGACGGGATCCCCCGACCGGCACGGGCCACGCCGAGCTCCCGGCCA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 16 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399617.5
ENST00000399634.5
ENST00000399641.6
ENST00000399655.6
ENST00000406454.7
ENST00000642375.2
ENST00000643038.2
ENST00000643528.1
ENST00000643730.1
ENST00000644235.2
ENST00000644369.2
ENST00000646280.1
ENST00000647327.2
3UTR-3UTR TCA 90 bp GGACGGAGTGAGCCGCACCACTGCCGGCCCGACGCCCATCCCCAGAGCTCCGCGGTAGGGTCCTTTTGGTaGGGGCGCGCGGGAAGCCGG +
Preference number: 2 (lower is better)
Translates to: GRSEPHHCRPDAHPQSSAVGSFW*GRAGSR
Trigger: CCGGCTTCCCGCGCGCCCTCACCAAAAGGACCCTAC...CGCGGAGCTCTGGGGATGGGCGTCGGGCCGGCAGTGGTGCGGCTCACTCCGTCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 16 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399617.5
ENST00000399634.5
ENST00000399641.6
ENST00000399655.6
ENST00000406454.7
ENST00000642375.2
ENST00000643038.2
ENST00000643528.1
ENST00000643730.1
ENST00000644235.2
ENST00000644369.2
ENST00000646280.1
ENST00000647327.2
3UTR-3UTR CCA 90 bp GGGCAGGGACGGAGTGAGCCGCACCACTGCCGGCCCGACGCCCATCCCCAGAGCCTCTCCGGGCCGGGTTaGGGTCCTCCTGGAAGTCCT +
Preference number: 2 (lower is better)
Translates to: GQGRSEPHHCRPDAHPQSLSGPG*GPPGSP
Trigger: AGGACTTCCAGGAGGACCCCAACCCGGCCCGGAGAG...GCTCTGGGGATGGGCGTCGGGCCGGCAGTGGTGCGGCTCACTCCGTCCCTGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399617.5
ENST00000399634.5
ENST00000399641.6
ENST00000399655.6
ENST00000406454.7
ENST00000642375.2
ENST00000643038.2
ENST00000643528.1
ENST00000643730.1
ENST00000644235.2
ENST00000644369.2
ENST00000646280.1
ENST00000647327.2
3UTR-3UTR CCA 90 bp GCACACCGTGCCGTTCTGGCACTGCCGCCCGTGGCCCGTTTCCAGCGCACAAGGTCCGGTGGGCCAGCCTaGCCCCGCAGTTTTCTCCCT +
Preference number: 2 (lower is better)
Translates to: AHRAVLALPPVARFQRTRSGGPA*PRSFLP
Trigger: AGGGAGAAAACTGCGGGGCCAGGCTGGCCCACCGGA...CCTTGTGCGCTGGAAACGGGCCACGGGCGGCAGTGCCAGAACGGCACGGTGTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR TCA 90 bp CTGGCCGGGAGCTCGGCGTGGCCCGTGCCGGTCGGGGGATCCCGTCGCAGGTGGAGGTCACGAGAACAGTaGGGCACTTCTGAAACGAAC +
Preference number: 2 (lower is better)
Translates to: LAGSSAWPVPVGGSRRRWRSREQ*GTSETN
Trigger: GTTCGTTTCAGAAGTGCCTCACTGTTCTCGTGACCT...CCACCTGCGACGGGATCCCCCGACCGGCACGGGCCACGCCGAGCTCCCGGCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 16 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399617.5
ENST00000399634.5
ENST00000399641.6
ENST00000399655.6
ENST00000406454.7
ENST00000642375.2
ENST00000643038.2
ENST00000643528.1
ENST00000643730.1
ENST00000644235.2
ENST00000644369.2
ENST00000646280.1
ENST00000647327.2
3UTR-3UTR TCA 90 bp CTCCCCGCCTCTGCAGACGCAGCCGGGCGCCTTCCTCCCGGAGGGCGGCTCGCGAGGTCACGAGAACAGTaGGGCACTTCTGAAACGAAC +
Preference number: 2 (lower is better)
Translates to: LPASADAAGRLPPGGRLARSREQ*GTSETN
Trigger: GTTCGTTTCAGAAGTGCCTCACTGTTCTCGTGACCT...CGCGAGCCGCCCTCCGGGAGGAAGGCGCCCGGCTGCGTCTGCAGAGGCGGGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000327702.12
ENST00000335762.9
ENST00000347598.9
ENST00000399603.6
ENST00000399617.5
ENST00000399634.5
ENST00000399641.6
ENST00000399655.6
ENST00000406454.7
ENST00000642375.2
ENST00000643038.2
ENST00000643528.1
ENST00000643730.1
ENST00000644235.2
ENST00000644369.2
ENST00000646280.1
ENST00000647229.1
ENST00000647327.2
3UTR-3UTR TCA 90 bp GGCAGGCGCCTTCCTCGCGCCCCGGGACCCTCGCCGCCTCCTCTCCCCGCCTCTTGGTCCCAACAGAAATaGATGAAGACGCTGTTCCGG +
Preference number: 2 (lower is better)
Translates to: GRRLPRAPGPSPPPLPASWSQQK*MKTLFR
Trigger: CCGGAACAGCGTCTTCATTCATTTCTGTTGGGACCA...AGAGGCGGGGAGAGGAGGCGGCGAGGGTCCCGGGGCGCGAGGAAGGCGCCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399617.5
ENST00000399634.5
ENST00000399641.6
ENST00000399655.6
ENST00000406454.7
ENST00000642375.2
ENST00000643038.2
ENST00000643528.1
ENST00000643730.1
ENST00000644235.2
ENST00000644369.2
ENST00000646280.1
ENST00000647327.2
3UTR-3UTR TCA 90 bp CTGGCCGGGAGCTCGGCGTGGCCCGTGCCGGTCGGGGGATCCCGTCGCAGGTGGTGGTCCCAACAGAAATaGATGAAGACGCTGTTCCGG +
Preference number: 2 (lower is better)
Translates to: LAGSSAWPVPVGGSRRRWWSQQK*MKTLFR
Trigger: CCGGAACAGCGTCTTCATTCATTTCTGTTGGGACCA...CCACCTGCGACGGGATCCCCCGACCGGCACGGGCCACGCCGAGCTCCCGGCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 16 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399617.5
ENST00000399634.5
ENST00000399641.6
ENST00000399655.6
ENST00000406454.7
ENST00000642375.2
ENST00000643038.2
ENST00000643528.1
ENST00000643730.1
ENST00000644235.2
ENST00000644369.2
ENST00000646280.1
ENST00000647327.2
3UTR-3UTR TCA 90 bp CCGCCTCTGCAGACGCAGCCGGGCGCCTTCCTCCCGGAGGGCGGCTCGCGCACCTGGTCCCAACAGAAATaGATGAAGACGCTGTTCCGG +
Preference number: 2 (lower is better)
Translates to: PPLQTQPGAFLPEGGSRTWSQQK*MKTLFR
Trigger: CCGGAACAGCGTCTTCATTCATTTCTGTTGGGACCA...GGTGCGCGAGCCGCCCTCCGGGAGGAAGGCGCCCGGCTGCGTCTGCAGAGGCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000327702.12
ENST00000335762.9
ENST00000347598.9
ENST00000399603.6
ENST00000399617.5
ENST00000399634.5
ENST00000399641.6
ENST00000399655.6
ENST00000406454.7
ENST00000642375.2
ENST00000643038.2
ENST00000643528.1
ENST00000643730.1
ENST00000644235.2
ENST00000644369.2
ENST00000646280.1
ENST00000647229.1
ENST00000647327.2
3UTR-3UTR TCA 90 bp CCGGGGCCTGCGAGCTGGGAGAGGGCAGGCGCCTTCCTCGCGCCCCGGGACCCTTGGTCCCAACAGAAATaGATGAAGACGCTGTTCCGG +
Preference number: 2 (lower is better)
Translates to: PGPASWERAGAFLAPRDPWSQQK*MKTLFR
Trigger: CCGGAACAGCGTCTTCATTCATTTCTGTTGGGACCA...AGGGTCCCGGGGCGCGAGGAAGGCGCCTGCCCTCTCCCAGCTCGCAGGCCCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399617.5
ENST00000399634.5
ENST00000399641.6
ENST00000399655.6
ENST00000406454.7
ENST00000642375.2
ENST00000643038.2
ENST00000643528.1
ENST00000643730.1
ENST00000644235.2
ENST00000644369.2
ENST00000646280.1
ENST00000647327.2
3UTR-3UTR GCA 90 bp GACTGCGGCGCGGCACTTCCTTCTGCAGAACCGATTCCACCGGCGCCAGTAGCGCGGGCTTGCACACCGTaGCGTTCTGGCACTGCCGCC +
Preference number: 2 (lower is better)
Translates to: DCGAALPSAEPIPPAPVARACTP*RSGTAA
Trigger: GGCGGCAGTGCCAGAACGGCACGGTGTGCAAGCCCG...CGCTACTGGCGCCGGTGGAATCGGTTCTGCAGAAGGAAGTGCCGCGCCGCAGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR TCA 90 bp CGCCTCCTCTCCCCGCCTCTGCAGACGCAGCCGGGCGCCTTCCTCCCGGAGGGCAGGTCACGAGAACAGTaGGGCACTTCTGAAACGAAC +
Preference number: 2 (lower is better)
Translates to: RLLSPPLQTQPGAFLPEGRSREQ*GTSETN
Trigger: GTTCGTTTCAGAAGTGCCTCACTGTTCTCGTGACCT...GCCCTCCGGGAGGAAGGCGCCCGGCTGCGTCTGCAGAGGCGGGGAGAGGAGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000327702.12
ENST00000335762.9
ENST00000347598.9
ENST00000399603.6
ENST00000399617.5
ENST00000399634.5
ENST00000399641.6
ENST00000399655.6
ENST00000406454.7
ENST00000642375.2
ENST00000643038.2
ENST00000643528.1
ENST00000643730.1
ENST00000644235.2
ENST00000644369.2
ENST00000646280.1
ENST00000647229.1
ENST00000647327.2
3UTR-3UTR TCA 90 bp CTCTCCCCGCCTCTGCAGACGCAGCCGGGCGCCTTCCTCCCGGAGGGCGGCTCGTGGTCCCAACAGAAATaGATGAAGACGCTGTTCCGG +
Preference number: 2 (lower is better)
Translates to: LSPPLQTQPGAFLPEGGSWSQQK*MKTLFR
Trigger: CCGGAACAGCGTCTTCATTCATTTCTGTTGGGACCA...CGAGCCGCCCTCCGGGAGGAAGGCGCCCGGCTGCGTCTGCAGAGGCGGGGAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000327702.12
ENST00000335762.9
ENST00000347598.9
ENST00000399603.6
ENST00000399617.5
ENST00000399634.5
ENST00000399641.6
ENST00000399655.6
ENST00000406454.7
ENST00000642375.2
ENST00000643038.2
ENST00000643528.1
ENST00000643730.1
ENST00000644235.2
ENST00000644369.2
ENST00000646280.1
ENST00000647229.1
ENST00000647327.2
3UTR-3UTR TCA 90 bp CGCACCACTGCCGGCCCGACGCCCATCCCCAGAGCTCCGCGCCCCTGGAGGCCTTGGTCCCAACAGAAATaGATGAAGACGCTGTTCCGG +
Preference number: 2 (lower is better)
Translates to: RTTAGPTPIPRAPRPWRPWSQQK*MKTLFR
Trigger: CCGGAACAGCGTCTTCATTCATTTCTGTTGGGACCA...AGGCCTCCAGGGGCGCGGAGCTCTGGGGATGGGCGTCGGGCCGGCAGTGGTGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399617.5
ENST00000399634.5
ENST00000399641.6
ENST00000399655.6
ENST00000406454.7
ENST00000642375.2
ENST00000643038.2
ENST00000643528.1
ENST00000643730.1
ENST00000644235.2
ENST00000644369.2
ENST00000646280.1
ENST00000647327.2
3UTR-3UTR TCA 90 bp GGGCAGGGACGGAGTGAGCCGCACCACTGCCGGCCCGACGCCCATCCCCAGAGCTGGTCCCAACAGAAATaGATGAAGACGCTGTTCCGG +
Preference number: 2 (lower is better)
Translates to: GQGRSEPHHCRPDAHPQSWSQQK*MKTLFR
Trigger: CCGGAACAGCGTCTTCATTCATTTCTGTTGGGACCA...GCTCTGGGGATGGGCGTCGGGCCGGCAGTGGTGCGGCTCACTCCGTCCCTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399617.5
ENST00000399634.5
ENST00000399641.6
ENST00000399655.6
ENST00000406454.7
ENST00000642375.2
ENST00000643038.2
ENST00000643528.1
ENST00000643730.1
ENST00000644235.2
ENST00000644369.2
ENST00000646280.1
ENST00000647327.2
3UTR-3UTR TCA 90 bp GAGCGCTCAGCGGAAGCTCAGCACCACCTGGTTGGGCGGAGCCGGCGGCGCAGCTGGTCCCAACAGAAATaGATGAAGACGCTGTTCCGG +
Preference number: 2 (lower is better)
Translates to: ERSAEAQHHLVGRSRRRSWSQQK*MKTLFR
Trigger: CCGGAACAGCGTCTTCATTCATTTCTGTTGGGACCA...GCTGCGCCGCCGGCTCCGCCCAACCAGGTGGTGCTGAGCTTCCGCTGAGCGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399617.5
ENST00000399634.5
ENST00000399641.6
ENST00000399655.6
ENST00000406454.7
ENST00000642375.2
ENST00000643038.2
ENST00000643528.1
ENST00000643730.1
ENST00000644235.2
ENST00000644369.2
ENST00000646280.1
ENST00000647327.2
3UTR-3UTR GCA 90 bp GACTGCGGCGCGGCACTTCCTTCTGCAGAACCGATTCCACCGGCGCCAGTAGCGCGCGGCACTTCCTTCTaGAGAACCGATTCCACCGGC +
Preference number: 2 (lower is better)
Translates to: DCGAALPSAEPIPPAPVARGTSF*RTDSTG
Trigger: GCCGGTGGAATCGGTTCTGCAGAAGGAAGTGCCGCG...CGCTACTGGCGCCGGTGGAATCGGTTCTGCAGAAGGAAGTGCCGCGCCGCAGTC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CCA 90 bp CCTGGTTCAGCTCTGGGCAGGTGTAGGAGTTGGGGCACTGACCATCGGAGCAGGTCCGGTGGGCCAGCCTaGCCCCGCAGTTTTCTCCCT +
Preference number: 2 (lower is better)
Translates to: PGSALGRCRSWGTDHRSRSGGPA*PRSFLP
Trigger: AGGGAGAAAACTGCGGGGCCAGGCTGGCCCACCGGA...CCTGCTCCGATGGTCAGTGCCCCAACTCCTACACCTGCCCAGAGCTGAACCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR CCA 90 bp GGGGCCCTTGTCTTCCGTGTGGGAGTCGATGGAGCGGTACAGCAGCTCTGGCCACTCAGAGAGTGGTCGTaGGCGAGGGCCGACAGGCAT +
Preference number: 2 (lower is better)
Translates to: GALVFRVGVDGAVQQLWPLREWS*ARADRH
Trigger: ATGCCTGTCGGCCCTCGCCCACGACCACTCTCTGAG...TGGCCAGAGCTGCTGTACCGCTCCATCGACTCCCACACGGAAGACAAGGGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CCA 90 bp GGGGCCCTTGTCTTCCGTGTGGGAGTCGATGGAGCGGTACAGCAGCTCTGGCCAGTGAAGCTCAGAGAGTaGTCGTGGGCGAGGGCCGAC +
Preference number: 2 (lower is better)
Translates to: GALVFRVGVDGAVQQLWPVKLRE*SWARAD
Trigger: GTCGGCCCTCGCCCACGACCACTCTCTGAGCTTCAC...TGGCCAGAGCTGCTGTACCGCTCCATCGACTCCCACACGGAAGACAAGGGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CCA 90 bp GACCACCTGGAGACTTGGGACTCCGGACACCAGCCGCAGGGGGCGCAGCACGCGTGCGGAGGTAGGCATTaGGGTGAAAGAGGAGTCCAT +
Preference number: 2 (lower is better)
Translates to: DHLETWDSGHQPQGAQHACGGRH*GERGVH
Trigger: ATGGACTCCTCTTTCACCCCAATGCCTACCTCCGCA...CGCGTGCTGCGCCCCCTGCGGCTGGTGTCCGGAGTCCCAAGTCTCCAGGTGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR GCA 90 bp GACTGCGGCGCGGCACTTCCTTCTGCAGAACCGATTCCACCGGCGCCAGTAGCGCTTCAGGAGCATCTCTaGCGTGAACAGGGCCAGCAG +
Preference number: 2 (lower is better)
Translates to: DCGAALPSAEPIPPAPVALQEHL*REQGQQ
Trigger: CTGCTGGCCCTGTTCACGGCAGAGATGCTCCTGAAG...CGCTACTGGCGCCGGTGGAATCGGTTCTGCAGAAGGAAGTGCCGCGCCGCAGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR GCA 90 bp GACTGCGGCGCGGCACTTCCTTCTGCAGAACCGATTCCACCGGCGCCAGTAGCGCTTGGATTCCCCCACTaGCGGCTTCTCCACCAACTC +
Preference number: 2 (lower is better)
Translates to: DCGAALPSAEPIPPAPVALGFPH*RLLHQL
Trigger: GAGTTGGTGGAGAAGCCGGCAGTGGGGGAATCCAAG...CGCTACTGGCGCCGGTGGAATCGGTTCTGCAGAAGGAAGTGCCGCGCCGCAGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR GCA 90 bp GACTGCGGCGCGGCACTTCCTTCTGCAGAACCGATTCCACCGGCGCCAGTAGCGCCCTCCGAGAGCGTTTaGCCCATCTGCTTTGGTTGC +
Preference number: 2 (lower is better)
Translates to: DCGAALPSAEPIPPAPVAPSESV*PICFGC
Trigger: GCAACCAAAGCAGATGGGGCAAACGCTCTCGGAGGG...CGCTACTGGCGCCGGTGGAATCGGTTCTGCAGAAGGAAGTGCCGCGCCGCAGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CCA 90 bp GACTGCGGCGCGGCACTTCCTTCTGCAGAACCGATTCCACCGGCGCCAGTAGCGCTGGGCTGGCAGTCCTaGCCAGCTTCTTTCTCTCCT +
Preference number: 2 (lower is better)
Translates to: DCGAALPSAEPIPPAPVALGWQS*PASFSP
Trigger: AGGAGAGAAAGAAGCTGGCCAGGACTGCCAGCCCAG...CGCTACTGGCGCCGGTGGAATCGGTTCTGCAGAAGGAAGTGCCGCGCCGCAGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR TCA 90 bp CCTCCCGGAGGGCGGCTCGCGCACCCAGGCTCCGCGTCTGGTCCCAACAGAAATAGGTCACGAGAACAGTaGGGCACTTCTGAAACGAAC +
Preference number: 2 (lower is better)
Translates to: PPGGRLAHPGSASGPNRNRSREQ*GTSETN
Trigger: GTTCGTTTCAGAAGTGCCTCACTGTTCTCGTGACCT...ATTTCTGTTGGGACCAGACGCGGAGCCTGGGTGCGCGAGCCGCCCTCCGGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000327702.12
ENST00000335762.9
ENST00000347598.9
ENST00000399603.6
ENST00000399617.5
ENST00000399634.5
ENST00000399641.6
ENST00000399655.6
ENST00000406454.7
ENST00000642375.2
ENST00000643038.2
ENST00000643528.1
ENST00000643730.1
ENST00000644235.2
ENST00000644369.2
ENST00000646280.1
ENST00000647229.1
ENST00000647327.2
3UTR-3UTR TCA 90 bp GACCATGTGTGGGCACAGACACCGTGTACCCTAAGGAAGGTGTCAGGGCAACGCGGAGCATCTCTGCCGTaGACAGGGCCAGCAGGGCCT +
Preference number: 2 (lower is better)
Translates to: DHVWAQTPCTLRKVSGQRGASLP*TGPAGP
Trigger: AGGCCCTGCTGGCCCTGTTCACGGCAGAGATGCTCC...GCGTTGCCCTGACACCTTCCTTAGGGTACACGGTGTCTGTGCCCACACATGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR CCA 90 bp GACCATGTGTGGGCACAGACACCGTGTACCCTAAGGAAGGTGTCAGGGCAACGCTCCGGTGGGCCAGCCTaGCCCCGCAGTTTTCTCCCT +
Preference number: 2 (lower is better)
Translates to: DHVWAQTPCTLRKVSGQRSGGPA*PRSFLP
Trigger: AGGGAGAAAACTGCGGGGCCAGGCTGGCCCACCGGA...GCGTTGCCCTGACACCTTCCTTAGGGTACACGGTGTCTGTGCCCACACATGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR CCA 90 bp GTCATCCATGTTGATCTTGGTGGCGGGTGGAGACTCTCCGTCAGCCGTGATGGAGACTTGGAGATCCGGTaGGCCAGCCTGGCCCCGCAG +
Preference number: 2 (lower is better)
Translates to: VIHVDLGGGWRLSVSRDGDLEIR*ASLAPQ
Trigger: CTGCGGGGCCAGGCTGGCCCACCGGATCTCCAAGTC...TCCATCACGGCTGACGGAGAGTCTCCACCCGCCACCAAGATCAACATGGATGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR TCA 90 bp CTCGATGTCACCTCCAGCCACGTTTTCGGTGTTGACGGACTCGGTCTCACTGGTGGAGCATCTCTGCCGTaGACAGGGCCAGCAGGGCCT +
Preference number: 2 (lower is better)
Translates to: LDVTSSHVFGVDGLGLTGGASLP*TGPAGP
Trigger: AGGCCCTGCTGGCCCTGTTCACGGCAGAGATGCTCC...ACCAGTGAGACCGAGTCCGTCAACACCGAAAACGTGGCTGGAGGTGACATCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR TCA 90 bp GAACAGGGCCAGCAGGGCCTTGTTTGCCGTGTCTTGGACTTCTGTGAGCCAGTTGCAGCCGGACGCATCTaGGCACGGAGATGCCCAGTG +
Preference number: 2 (lower is better)
Translates to: EQGQQGLVCRVLDFCEPVAAGRI*ARRCPV
Trigger: CACTGGGCATCTCCGTGCTCAGATGCGTCCGGCTGC...AACTGGCTCACAGAAGTCCAAGACACGGCAAACAAGGCCCTGCTGGCCCTGTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR TCA 90 bp TCACTGGTGGGCATGCTCATGTTTCGGGGCTTCTCCTCATCCATGCCTTCGTCCGCAGCCGGACGCATCTaGGCACGGAGATGCCCAGTG +
Preference number: 2 (lower is better)
Translates to: SLVGMLMFRGFSSSMPSSAAGRI*ARRCPV
Trigger: CACTGGGCATCTCCGTGCTCAGATGCGTCCGGCTGC...GGACGAAGGCATGGATGAGGAGAAGCCCCGAAACATGAGCATGCCCACCAGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR TCA 90 bp GGGGCCCTTGTCTTCCGTGTGGGAGTCGATGGAGCGGTACAGCAGCTCTGGCCACTAGGATATGGTTCCTaGAGGAGGTGTGCTGGACCG +
Preference number: 2 (lower is better)
Translates to: GALVFRVGVDGAVQQLWPLGYGS*RRCAGP
Trigger: CGGTCCAGCACACCTCCTTCAGGAACCATATCCTAG...TGGCCAGAGCTGCTGTACCGCTCCATCGACTCCCACACGGAAGACAAGGGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR TCA 90 bp GTCATCCATGTTGATCTTGGTGGCGGGTGGAGACTCTCCGTCAGCCGTGATGGATGGCCCTCAGGGGCCTaGGTACTCGCAGGACTCGCA +
Preference number: 2 (lower is better)
Translates to: VIHVDLGGGWRLSVSRDGWPSGA*VLAGLA
Trigger: TGCGAGTCCTGCGAGTACTCAGGCCCCTGAGGGCCA...TCCATCACGGCTGACGGAGAGTCTCCACCCGCCACCAAGATCAACATGGATGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR GCA 90 bp CGCACCACTGCCGGCCCGACGCCCATCCCCAGAGCTCCGCGCCCCTGGAGGCCTCTCGTACAGAATATGTaGAAATGGTTTCTACAAGCA +
Preference number: 2 (lower is better)
Translates to: RTTAGPTPIPRAPRPWRPLVQNM*KWFLQA
Trigger: TGCTTGTAGAAACCATTTGCACATATTCTGTACGAG...AGGCCTCCAGGGGCGCGGAGCTCTGGGGATGGGCGTCGGGCCGGCAGTGGTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399617.5
ENST00000399634.5
ENST00000399641.6
ENST00000399655.6
ENST00000406454.7
ENST00000642375.2
ENST00000643038.2
ENST00000643528.1
ENST00000643730.1
ENST00000644235.2
ENST00000644369.2
ENST00000646280.1
ENST00000647327.2
3UTR-3UTR GCA 90 bp GGAGCTCGGCGTGGCCCGTGCCGGTCGGGGGATCCCGTCGCAGGTGGGCAGGGACTCGTACAGAATATGTaGAAATGGTTTCTACAAGCA +
Preference number: 2 (lower is better)
Translates to: GARRGPCRSGDPVAGGQGLVQNM*KWFLQA
Trigger: TGCTTGTAGAAACCATTTGCACATATTCTGTACGAG...TCCCTGCCCACCTGCGACGGGATCCCCCGACCGGCACGGGCCACGCCGAGCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 16 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399617.5
ENST00000399634.5
ENST00000399641.6
ENST00000399655.6
ENST00000406454.7
ENST00000642375.2
ENST00000643038.2
ENST00000643528.1
ENST00000643730.1
ENST00000644235.2
ENST00000644369.2
ENST00000646280.1
ENST00000647327.2
3UTR-3UTR GCA 90 bp GACTGCGGCGCGGCACTTCCTTCTGCAGAACCGATTCCACCGGCGCCAGTAGCGAGGATGCCACCAGGTTaGTCAAGGAGTTCCAGTACC +
Preference number: 2 (lower is better)
Translates to: DCGAALPSAEPIPPAPVARMPPG*SRSSST
Trigger: GGTACTGGAACTCCTTGAGCAACCTGGTGGCATCCT...CGCTACTGGCGCCGGTGGAATCGGTTCTGCAGAAGGAAGTGCCGCGCCGCAGTC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CCA 90 bp GAACAGGGCCAGCAGGGCCTTGTTTGCCGTGTCTTGGACTTCTGTGAGCCAGTTTCCGGTGGGCCAGCCTaGCCCCGCAGTTTTCTCCCT +
Preference number: 2 (lower is better)
Translates to: EQGQQGLVCRVLDFCEPVSGGPA*PRSFLP
Trigger: AGGGAGAAAACTGCGGGGCCAGGCTGGCCCACCGGA...AACTGGCTCACAGAAGTCCAAGACACGGCAAACAAGGCCCTGCTGGCCCTGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CCA 90 bp CCGTTCTGTCCACCCCTGATGCCTGGGAATCAAAGGTCTTTCTCAGAGGCCTACGACTTGGAGATCCGGTaGGCCAGCCTGGCCCCGCAG +
Preference number: 2 (lower is better)
Translates to: PFCPPLMPGNQRSFSEAYDLEIR*ASLAPQ
Trigger: CTGCGGGGCCAGGCTGGCCCACCGGATCTCCAAGTC...GTAGGCCTCTGAGAAAGACCTTTGATTCCCAGGCATCAGGGGTGGACAGAACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR CCA 90 bp GGGGCCCTTGTCTTCCGTGTGGGAGTCGATGGAGCGGTACAGCAGCTCTGGCCACAATCTTCTCCTCCTTaGATTCCCCCACTGCCGGCT +
Preference number: 2 (lower is better)
Translates to: GALVFRVGVDGAVQQLWPQSSPP*IPPLPA
Trigger: AGCCGGCAGTGGGGGAATCCAAGGAGGAGAAGATTG...TGGCCAGAGCTGCTGTACCGCTCCATCGACTCCCACACGGAAGACAAGGGCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CCA 90 bp CTGGAGGTCATCCATGTTGATCTTGGTGGCGGGTGGAGACTCTCCGTCAGCCGTGTGAAGCTCAGAGAGTaGTCGTGGGCGAGGGCCGAC +
Preference number: 2 (lower is better)
Translates to: LEVIHVDLGGGWRLSVSRVKLRE*SWARAD
Trigger: GTCGGCCCTCGCCCACGACCACTCTCTGAGCTTCAC...ACGGCTGACGGAGAGTCTCCACCCGCCACCAAGATCAACATGGATGACCTCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CCA 90 bp GGGGCCCTTGTCTTCCGTGTGGGAGTCGATGGAGCGGTACAGCAGCTCTGGCCAGAATTCAGGACCACCTaGAGACTTGGGACTCCGGAC +
Preference number: 2 (lower is better)
Translates to: GALVFRVGVDGAVQQLWPEFRTT*RLGTPD
Trigger: GTCCGGAGTCCCAAGTCTCCAGGTGGTCCTGAATTC...TGGCCAGAGCTGCTGTACCGCTCCATCGACTCCCACACGGAAGACAAGGGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR TCA 90 bp TCTGCATTGCCTAGGATATGGTTCCTGAAGGAGGTGTGCTGGACCGGGTCCTCAGGAGCATCTCTGCCGTaGACAGGGCCAGCAGGGCCT +
Preference number: 2 (lower is better)
Translates to: SALPRIWFLKEVCWTGSSGASLP*TGPAGP
Trigger: AGGCCCTGCTGGCCCTGTTCACGGCAGAGATGCTCC...TGAGGACCCGGTCCAGCACACCTCCTTCAGGAACCATATCCTAGGCAATGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR TCA 90 bp ATGTTGATCTTGGTGGCGGGTGGAGACTCTCCGTCAGCCGTGATGGATTTCAGCGGAGCATCTCTGCCGTaGACAGGGCCAGCAGGGCCT +
Preference number: 2 (lower is better)
Translates to: MLILVAGGDSPSAVMDFSGASLP*TGPAGP
Trigger: AGGCCCTGCTGGCCCTGTTCACGGCAGAGATGCTCC...GCTGAAATCCATCACGGCTGACGGAGAGTCTCCACCCGCCACCAAGATCAACAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR GCA 90 bp GGGCAGGGACGGAGTGAGCCGCACCACTGCCGGCCCGACGCCCATCCCCAGAGCCTCGTACAGAATATGTaGAAATGGTTTCTACAAGCA +
Preference number: 2 (lower is better)
Translates to: GQGRSEPHHCRPDAHPQSLVQNM*KWFLQA
Trigger: TGCTTGTAGAAACCATTTGCACATATTCTGTACGAG...GCTCTGGGGATGGGCGTCGGGCCGGCAGTGGTGCGGCTCACTCCGTCCCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399617.5
ENST00000399634.5
ENST00000399641.6
ENST00000399655.6
ENST00000406454.7
ENST00000642375.2
ENST00000643038.2
ENST00000643528.1
ENST00000643730.1
ENST00000644235.2
ENST00000644369.2
ENST00000646280.1
ENST00000647327.2
3UTR-3UTR GCA 90 bp GGTTCTGATGGTACTACTTCCATCCAAGGGAGTCACTCTACTGCACCCTCCTTGAGTGAGCCGCACCACTaGCGGCCCGACGCCCATCCC +
Preference number: 2 (lower is better)
Translates to: GSDGTTSIQGSHSTAPSLSEPHH*RPDAHP
Trigger: GGGATGGGCGTCGGGCCGGCAGTGGTGCGGCTCACT...CAAGGAGGGTGCAGTAGAGTGACTCCCTTGGATGGAAGTAGTACCATCAGAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR CCA 90 bp TCTTCAGCTGCATGGGCAGGAGACATGCTGGGTGGAGAAAAGCTGGGAGAAAGTAGAGCTCCGCGCCCCTaGAGGCCTCCTCCTCCCTCT +
Preference number: 2 (lower is better)
Translates to: SSAAWAGDMLGGEKLGESRAPRP*RPPPPS
Trigger: AGAGGGAGGAGGAGGCCTCCAGGGGCGCGGAGCTCT...ACTTTCTCCCAGCTTTTCTCCACCCAGCATGTCTCCTGCCCATGCAGCTGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR CCA 90 bp GGTTCTGATGGTACTACTTCCATCCAAGGGAGTCACTCTACTGCACCCTCCTTGTCAGCACCACCTGGTTaGGCGGAGCCGGCGGCGCAG +
Preference number: 2 (lower is better)
Translates to: GSDGTTSIQGSHSTAPSLSAPPG*AEPAAQ
Trigger: CTGCGCCGCCGGCTCCGCCCAACCAGGTGGTGCTGA...CAAGGAGGGTGCAGTAGAGTGACTCCCTTGGATGGAAGTAGTACCATCAGAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR CCA 90 bp TCTTCAGCTGCATGGGCAGGAGACATGCTGGGTGGAGAAAAGCTGGGAGAAAGTAAGCTCAGCACCACCTaGTTGGGCGGAGCCGGCGGC +
Preference number: 2 (lower is better)
Translates to: SSAAWAGDMLGGEKLGESKLSTT*LGGAGG
Trigger: GCCGCCGGCTCCGCCCAACCAGGTGGTGCTGAGCTT...ACTTTCTCCCAGCTTTTCTCCACCCAGCATGTCTCCTGCCCATGCAGCTGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR CCA 90 bp CCCGTGATTCTGACCCATCTACAGAGGCCCAGGGTGGAAGGTGTGGCTCATACCGATCTTGGTGGCGGGTaGAGACTCTCCGTCAGCCGT +
Preference number: 2 (lower is better)
Translates to: PVILTHLQRPRVEGVAHTDLGGG*RLSVSR
Trigger: ACGGCTGACGGAGAGTCTCCACCCGCCACCAAGATC...GGTATGAGCCACACCTTCCACCCTGGGCCTCTGTAGATGGGTCAGAATCACGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR CCA 90 bp AGCTTCTTTCTCTCCTTCTCCTCTTCCTCCTCCTTTTGGGCAGATGTGAGGCTCCACACCGTGCCGTTCTaGCACTGCCGCCCGTGGCCC +
Preference number: 2 (lower is better)
Translates to: SFFLSFSSSSSFWADVRLHTVPF*HCRPWP
Trigger: GGGCCACGGGCGGCAGTGCCAGAACGGCACGGTGTG...GAGCCTCACATCTGCCCAAAAGGAGGAGGAAGAGGAGAAGGAGAGAAAGAAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR TCA 90 bp CTGGAGGTCATCCATGTTGATCTTGGTGGCGGGTGGAGACTCTCCGTCAGCCGTCCACGTTTTCGGTGTTaGCGGACTCGGTCTCACTGG +
Preference number: 2 (lower is better)
Translates to: LEVIHVDLGGGWRLSVSRPRFRC*RTRSHW
Trigger: CCAGTGAGACCGAGTCCGTCAACACCGAAAACGTGG...ACGGCTGACGGAGAGTCTCCACCCGCCACCAAGATCAACATGGATGACCTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR TCA 90 bp CCCGTGATTCTGACCCATCTACAGAGGCCCAGGGTGGAAGGTGTGGCTCATACCTGCCCAGTGGGGACATaGTCTTGGTCTCCACCAGGA +
Preference number: 2 (lower is better)
Translates to: PVILTHLQRPRVEGVAHTCPVGT*SWSPPG
Trigger: TCCTGGTGGAGACCAAGATCATGTCCCCACTGGGCA...GGTATGAGCCACACCTTCCACCCTGGGCCTCTGTAGATGGGTCAGAATCACGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR TCA 90 bp GGGGCCCTTGTCTTCCGTGTGGGAGTCGATGGAGCGGTACAGCAGCTCTGGCCAGCCTTTTCCTTAAGGTaGAGCTCAGAGAGTGGTCGT +
Preference number: 2 (lower is better)
Translates to: GALVFRVGVDGAVQQLWPAFSLR*SSESGR
Trigger: ACGACCACTCTCTGAGCTTCACCTTAAGGAAAAGGC...TGGCCAGAGCTGCTGTACCGCTCCATCGACTCCCACACGGAAGACAAGGGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR TCA 90 bp GGGGCCCTTGTCTTCCGTGTGGGAGTCGATGGAGCGGTACAGCAGCTCTGGCCACCCCGTCTTTGTACGTaGTGTAGTTGCCCTTGCATT +
Preference number: 2 (lower is better)
Translates to: GALVFRVGVDGAVQQLWPPRLCT*CSCPCI
Trigger: AATGCAAGGGCAACTACATCACGTACAAAGACGGGG...TGGCCAGAGCTGCTGTACCGCTCCATCGACTCCCACACGGAAGACAAGGGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR TCA 90 bp CCGTTCTGTCCACCCCTGATGCCTGGGAATCAAAGGTCTTTCTCAGAGGCCTACAGCTGCGGGGTTGGATaGTGGGGTGGTCAACCTCCC +
Preference number: 2 (lower is better)
Translates to: PFCPPLMPGNQRSFSEAYSCGVG*WGGQPP
Trigger: GGGAGGTTGACCACCCCATCATCCAACCCCGCAGCT...GTAGGCCTCTGAGAAAGACCTTTGATTCCCAGGCATCAGGGGTGGACAGAACGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR TCA 90 bp CCTTGCATTCCGCCTCTGTCTGCTTGGAACTGTCTGAACAGGTGTACAGCTTTCGCAGGGGCCGGGCCTTaGGGGCGTATTCCACGCACT +
Preference number: 2 (lower is better)
Translates to: PCIPPLSAWNCLNRCTAFAGAGP*GRIPRT
Trigger: AGTGCGTGGAATACGCCCTCAAGGCCCGGCCCCTGC...GAAAGCTGTACACCTGTTCAGACAGTTCCAAGCAGACAGAGGCGGAATGCAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR GCA 90 bp CCCGTGATTCTGACCCATCTACAGAGGCCCAGGGTGGAAGGTGTGGCTCATACCCTTCAGGAGCATCTCTaGCGTGAACAGGGCCAGCAG +
Preference number: 2 (lower is better)
Translates to: PVILTHLQRPRVEGVAHTLQEHL*REQGQQ
Trigger: CTGCTGGCCCTGTTCACGGCAGAGATGCTCCTGAAG...GGTATGAGCCACACCTTCCACCCTGGGCCTCTGTAGATGGGTCAGAATCACGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR GCA 90 bp GGGGCCCTTGTCTTCCGTGTGGGAGTCGATGGAGCGGTACAGCAGCTCTGGCCAGGAAGTTATCGAATGTaGTCCTCCGGGTCTGCATCT +
Preference number: 2 (lower is better)
Translates to: GALVFRVGVDGAVQQLWPGSYRM*SSGSAS
Trigger: AGATGCAGACCCGGAGGAGCACATTCGATAACTTCC...TGGCCAGAGCTGCTGTACCGCTCCATCGACTCCCACACGGAAGACAAGGGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR GCA 90 bp CTGGAGGTCATCCATGTTGATCTTGGTGGCGGGTGGAGACTCTCCGTCAGCCGTCTTGGATTCCCCCACTaGCGGCTTCTCCACCAACTC +
Preference number: 2 (lower is better)
Translates to: LEVIHVDLGGGWRLSVSRLGFPH*RLLHQL
Trigger: GAGTTGGTGGAGAAGCCGGCAGTGGGGGAATCCAAG...ACGGCTGACGGAGAGTCTCCACCCGCCACCAAGATCAACATGGATGACCTCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR GCA 90 bp TTGGTGATGCCGTGCTTGGGACCATCCCAGCCGGGCTTGCACACCGTGCCGTTCGGAAGGGTCATCTTCTaGTGGAACATCTGCTATGCC +
Preference number: 2 (lower is better)
Translates to: LVMPCLGPSQPGLHTVPFGRVIF*WNICYA
Trigger: GGCATAGCAGATGTTCCAGCAGAAGATGACCCTTCC...GAACGGCACGGTGTGCAAGCCCGGCTGGGATGGTCCCAAGCACGGCATCACCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CCA 90 bp TCTTCAGCTGCATGGGCAGGAGACATGCTGGGTGGAGAAAAGCTGGGAGAAAGTCTCTCCGGGCCGGGTTaGGGTCCTCCTGGAAGTCCT +
Preference number: 2 (lower is better)
Translates to: SSAAWAGDMLGGEKLGESLSGPG*GPPGSP
Trigger: AGGACTTCCAGGAGGACCCCAACCCGGCCCGGAGAG...ACTTTCTCCCAGCTTTTCTCCACCCAGCATGTCTCCTGCCCATGCAGCTGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR CCA 90 bp GGTTCTGATGGTACTACTTCCATCCAAGGGAGTCACTCTACTGCACCCTCCTTGAGAGCTCCGCGCCCCTaGAGGCCTCCTCCTCCCTCT +
Preference number: 2 (lower is better)
Translates to: GSDGTTSIQGSHSTAPSLRAPRP*RPPPPS
Trigger: AGAGGGAGGAGGAGGCCTCCAGGGGCGCGGAGCTCT...CAAGGAGGGTGCAGTAGAGTGACTCCCTTGGATGGAAGTAGTACCATCAGAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR CCA 90 bp GACTGCGGCGCGGCACTTCCTTCTGCAGAACCGATTCCACCGGCGCCAGTAGCGTTGTTTGCCGTGTCTTaGACTTCTGTGAGCCAGTTG +
Preference number: 2 (lower is better)
Translates to: DCGAALPSAEPIPPAPVALFAVS*TSVSQL
Trigger: CAACTGGCTCACAGAAGTCCAAGACACGGCAAACAA...CGCTACTGGCGCCGGTGGAATCGGTTCTGCAGAAGGAAGTGCCGCGCCGCAGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CCA 90 bp GTGAGGAGGGACTGGGGGAAGTTATCGAATGTGCTCCTCCGGGTCTGCATCTCATGGTCTCCACCAGGATaGTCTCCAGGATGCCGCCAC +
Preference number: 2 (lower is better)
Translates to: VRRDWGKLSNVLLRVCISWSPPG*SPGCRH
Trigger: GTGGCGGCATCCTGGAGACCATCCTGGTGGAGACCA...TGAGATGCAGACCCGGAGGAGCACATTCGATAACTTCCCCCAGTCCCTCCTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CCA 90 bp TCACTGGTGGGCATGCTCATGTTTCGGGGCTTCTCCTCATCCATGCCTTCGTCCTGGTCTCCACCAGGATaGTCTCCAGGATGCCGCCAC +
Preference number: 2 (lower is better)
Translates to: SLVGMLMFRGFSSSMPSSWSPPG*SPGCRH
Trigger: GTGGCGGCATCCTGGAGACCATCCTGGTGGAGACCA...GGACGAAGGCATGGATGAGGAGAAGCCCCGAAACATGAGCATGCCCACCAGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CCA 90 bp TGTCCTGGTGGTGAATCCCGGCCAGTGGATACCCGTGATTCTGACCCATCTACACTCAGAGAGTGGTCGTaGGCGAGGGCCGACAGGCAT +
Preference number: 2 (lower is better)
Translates to: CPGGESRPVDTRDSDPSTLREWS*ARADRH
Trigger: ATGCCTGTCGGCCCTCGCCCACGACCACTCTCTGAG...TGTAGATGGGTCAGAATCACGGGTATCCACTGGCCGGGATTCACCACCAGGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR CCA 90 bp GTCATCCATGTTGATCTTGGTGGCGGGTGGAGACTCTCCGTCAGCCGTGATGGAGCGGTACAGCAGCTCTaGCCACCCTTCGAAGGTGGA +
Preference number: 2 (lower is better)
Translates to: VIHVDLGGGWRLSVSRDGAVQQL*PPFEGG
Trigger: TCCACCTTCGAAGGGTGGCCAGAGCTGCTGTACCGC...TCCATCACGGCTGACGGAGAGTCTCCACCCGCCACCAAGATCAACATGGATGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CCA 90 bp CCTTGGCCTTCTCCCTCTCTTTGGAAAACTCTCCGCTCAACACACCGAGAACCATGGCACTGCCGCCCGTaGCCCGTTTCCAGCGCACAA +
Preference number: 2 (lower is better)
Translates to: PWPSPSLWKTLRSTHREPWHCRP*PVSSAQ
Trigger: TTGTGCGCTGGAAACGGGCCACGGGCGGCAGTGCCA...TGGTTCTCGGTGTGTTGAGCGGAGAGTTTTCCAAAGAGAGGGAGAAGGCCAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR TCA 90 bp CTTTGCCACTTCAGGTGCTGTGGCTCAAACCTCTTAAAGTCATCCCAGGAAAAATGGGCAGGGACGGAGTaGGCCGCACCACTGCCGGCC +
Preference number: 2 (lower is better)
Translates to: LCHFRCCGSNLLKSSQEKWAGTE*AAPLPA
Trigger: GGCCGGCAGTGGTGCGGCTCACTCCGTCCCTGCCCA...TTTTTCCTGGGATGACTTTAAGAGGTTTGAGCCACAGCACCTGAAGTGGCAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR TCA 90 bp CTCGATGTCACCTCCAGCCACGTTTTCGGTGTTGACGGACTCGGTCTCACTGGTGTAGCGGCTGAACTTTaGCTTGGAGATCCGGTGGGC +
Preference number: 2 (lower is better)
Translates to: LDVTSSHVFGVDGLGLTGVAAEL*LGDPVG
Trigger: GCCCACCGGATCTCCAAGTCAAAGTTCAGCCGCTAC...ACCAGTGAGACCGAGTCCGTCAACACCGAAAACGTGGCTGGAGGTGACATCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR TCA 90 bp CTGGAGGTCATCCATGTTGATCTTGGTGGCGGGTGGAGACTCTCCGTCAGCCGTCCTTTTGGGCAGATGTaGGGCTCTCAGCATCAGCCA +
Preference number: 2 (lower is better)
Translates to: LEVIHVDLGGGWRLSVSRPFGQM*GSQHQP
Trigger: TGGCTGATGCTGAGAGCCTCACATCTGCCCAAAAGG...ACGGCTGACGGAGAGTCTCCACCCGCCACCAAGATCAACATGGATGACCTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR GCA 90 bp GTGAGGAGGGACTGGGGGAAGTTATCGAATGTGCTCCTCCGGGTCTGCATCTCACTTCAGGAGCATCTCTaGCGTGAACAGGGCCAGCAG +
Preference number: 2 (lower is better)
Translates to: VRRDWGKLSNVLLRVCISLQEHL*REQGQQ
Trigger: CTGCTGGCCCTGTTCACGGCAGAGATGCTCCTGAAG...TGAGATGCAGACCCGGAGGAGCACATTCGATAACTTCCCCCAGTCCCTCCTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR GCA 90 bp CCCGTGATTCTGACCCATCTACAGAGGCCCAGGGTGGAAGGTGTGGCTCATACCGGAATCTGCAGCTTGTaGATGCCAGCCAGGGTCAAC +
Preference number: 2 (lower is better)
Translates to: PVILTHLQRPRVEGVAHTGICSL*MPARVN
Trigger: GTTGACCCTGGCTGGCATGCACAAGCTGCAGATTCC...GGTATGAGCCACACCTTCCACCCTGGGCCTCTGTAGATGGGTCAGAATCACGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR GCA 90 bp AGCTTCTTTCTCTCCTTCTCCTCTTCCTCCTCCTTTTGGGCAGATGTGAGGCTCCATCCCAGCCGGGCTTaGACACCGTGCCGTTCTGGC +
Preference number: 2 (lower is better)
Translates to: SFFLSFSSSSSFWADVRLHPSRA*TPCRSG
Trigger: GCCAGAACGGCACGGTGTGCAAGCCCGGCTGGGATG...GAGCCTCACATCTGCCCAAAAGGAGGAGGAAGAGGAGAAGGAGAGAAAGAAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CCA 90 bp CTTTGCCACTTCAGGTGCTGTGGCTCAAACCTCTTAAAGTCATCCCAGGAAAAACCGGGGCCTGCGAGCTaGGAGAGGGCAGGCGCCTTC +
Preference number: 2 (lower is better)
Translates to: LCHFRCCGSNLLKSSQEKPGPAS*ERAGAF
Trigger: GAAGGCGCCTGCCCTCTCCCAGCTCGCAGGCCCCGG...TTTTTCCTGGGATGACTTTAAGAGGTTTGAGCCACAGCACCTGAAGTGGCAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR CCA 90 bp ATGTTGATCTTGGTGGCGGGTGGAGACTCTCCGTCAGCCGTGATGGATTTCAGCGGAGCAGGGAGGCGATaGAGCGCACAGAGTTCAGCA +
Preference number: 2 (lower is better)
Translates to: MLILVAGGDSPSAVMDFSGAGRR*SAQSSA
Trigger: TGCTGAACTCTGTGCGCTCCATCGCCTCCCTGCTCC...GCTGAAATCCATCACGGCTGACGGAGAGTCTCCACCCGCCACCAAGATCAACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CCA 90 bp TCACTGGTGGGCATGCTCATGTTTCGGGGCTTCTCCTCATCCATGCCTTCGTCCCTGGGCTGGCAGTCCTaGCCAGCTTCTTTCTCTCCT +
Preference number: 2 (lower is better)
Translates to: SLVGMLMFRGFSSSMPSSLGWQS*PASFSP
Trigger: AGGAGAGAAAGAAGCTGGCCAGGACTGCCAGCCCAG...GGACGAAGGCATGGATGAGGAGAAGCCCCGAAACATGAGCATGCCCACCAGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CCA 90 bp TCTGTGTTGCCTCTGGGAAAACTACCAAAGGAGGGAGGGGAAGGCTCAGTAAGCGTGAAGCTCAGAGAGTaGTCGTGGGCGAGGGCCGAC +
Preference number: 2 (lower is better)
Translates to: SVLPLGKLPKEGGEGSVSVKLRE*SWARAD
Trigger: GTCGGCCCTCGCCCACGACCACTCTCTGAGCTTCAC...GCTTACTGAGCCTTCCCCTCCCTCCTTTGGTAGTTTTCCCAGAGGCAACACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR CCA 90 bp CCTGGTTCAGCTCTGGGCAGGTGTAGGAGTTGGGGCACTGACCATCGGAGCAGGACAATGCGGTGGCACTaGAGGCGAAACCTGTTGTTA +
Preference number: 2 (lower is better)
Translates to: PGSALGRCRSWGTDHRSRTMRWH*RRNLLL
Trigger: TAACAACAGGTTTCGCCTCCAGTGCCACCGCATTGT...CCTGCTCCGATGGTCAGTGCCCCAACTCCTACACCTGCCCAGAGCTGAACCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR CCA 90 bp TGTCCTGGTGGTGAATCCCGGCCAGTGGATACCCGTGATTCTGACCCATCTACACCGTGTGGGAGTCGATaGAGCGGTACAGCAGCTCTG +
Preference number: 2 (lower is better)
Translates to: CPGGESRPVDTRDSDPSTPCGSR*SGTAAL
Trigger: CAGAGCTGCTGTACCGCTCCATCGACTCCCACACGG...TGTAGATGGGTCAGAATCACGGGTATCCACTGGCCGGGATTCACCACCAGGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR CCA 90 bp CCCGTGATTCTGACCCATCTACAGAGGCCCAGGGTGGAAGGTGTGGCTCATACCTCCACGCACTGTCGCTaGTTCTTGTCCAGCTCACAG +
Preference number: 2 (lower is better)
Translates to: PVILTHLQRPRVEGVAHTSTHCR*FLSSSQ
Trigger: CTGTGAGCTGGACAAGAACCAGCGACAGTGCGTGGA...GGTATGAGCCACACCTTCCACCCTGGGCCTCTGTAGATGGGTCAGAATCACGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR CCA 90 bp CTGGAGGTCATCCATGTTGATCTTGGTGGCGGGTGGAGACTCTCCGTCAGCCGTCGGACTCGGTCTCACTaGTGGGCATGCTCATGTTTC +
Preference number: 2 (lower is better)
Translates to: LEVIHVDLGGGWRLSVSRRTRSH*WACSCF
Trigger: GAAACATGAGCATGCCCACCAGTGAGACCGAGTCCG...ACGGCTGACGGAGAGTCTCCACCCGCCACCAAGATCAACATGGATGACCTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672721.1
ENST00000672806.1
3UTR CAA 90 bp CTTCTCCTCCTTGGATTCCCCCACTGCCGGCTTCTCCACCAACTCTaGTTTCTTCTCTGGGCTGGCAGTCCTGGCCAGCTTCTTTCTCTC +
Preference number: 2 (lower is better)
Translates to: LLLLGFPHCRLLHQL*FLLWAGSPGQLLSL
Trigger: GAGAGAAAGAAGCTGGCCAGGACTGCCAGCCCAGAGAAGAAACAAGAGTTGGTGGAGAAGCCGGCAGTGGGGGAATCCAAGGAGGAGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR TCA 90 bp AATAGACCTTTCAGTGCTTCACCAACGGGGAATCTGTCGCCCTATTTCTTAATGTGGGCAGGGACGGAGTaGGCCGCACCACTGCCGGCC +
Preference number: 2 (lower is better)
Translates to: NRPFSASPTGNLSPYFLMWAGTE*AAPLPA
Trigger: GGCCGGCAGTGGTGCGGCTCACTCCGTCCCTGCCCA...CATTAAGAAATAGGGCGACAGATTCCCCGTTGGTGAAGCACTGAAAGGTCTATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR TCA 90 bp GTTTTTGCTTTCAAACGGCCCCAGATTCAGATCTTCCCACAGCTAAACCAGAAATGGGCAGGGACGGAGTaGGCCGCACCACTGCCGGCC +
Preference number: 2 (lower is better)
Translates to: VFAFKRPQIQIFPQLNQKWAGTE*AAPLPA
Trigger: GGCCGGCAGTGGTGCGGCTCACTCCGTCCCTGCCCA...TTTCTGGTTTAGCTGTGGGAAGATCTGAATCTGGGGCCGTTTGAAAGCAAAAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR TCA 90 bp TCTGCATTGCCTAGGATATGGTTCCTGAAGGAGGTGTGCTGGACCGGGTCCTCATGCCCAGTGGGGACATaGTCTTGGTCTCCACCAGGA +
Preference number: 2 (lower is better)
Translates to: SALPRIWFLKEVCWTGSSCPVGT*SWSPPG
Trigger: TCCTGGTGGAGACCAAGATCATGTCCCCACTGGGCA...TGAGGACCCGGTCCAGCACACCTCCTTCAGGAACCATATCCTAGGCAATGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR TCA 90 bp ATGTTGATCTTGGTGGCGGGTGGAGACTCTCCGTCAGCCGTGATGGATTTCAGCTCCCCGGTCAGGATCTaGAACACAGTGAGGAGGGAC +
Preference number: 2 (lower is better)
Translates to: MLILVAGGDSPSAVMDFSSPVRI*NTVRRD
Trigger: GTCCCTCCTCACTGTGTTTCAGATCCTGACCGGGGA...GCTGAAATCCATCACGGCTGACGGAGAGTCTCCACCCGCCACCAAGATCAACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR TCA 90 bp GAACAGGGCCAGCAGGGCCTTGTTTGCCGTGTCTTGGACTTCTGTGAGCCAGTTCCTTTTGGGCAGATGTaGGGCTCTCAGCATCAGCCA +
Preference number: 2 (lower is better)
Translates to: EQGQQGLVCRVLDFCEPVPFGQM*GSQHQP
Trigger: TGGCTGATGCTGAGAGCCTCACATCTGCCCAAAAGG...AACTGGCTCACAGAAGTCCAAGACACGGCAAACAAGGCCCTGCTGGCCCTGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR TCA 90 bp CCCGTGATTCTGACCCATCTACAGAGGCCCAGGGTGGAAGGTGTGGCTCATACCGCAGGTCCAGGATGTTaGAGTAGTTCCGGCAGAAAG +
Preference number: 2 (lower is better)
Translates to: PVILTHLQRPRVEGVAHTAGPGC*SSSGRK
Trigger: CTTTCTGCCGGAACTACTTCAACATCCTGGACCTGC...GGTATGAGCCACACCTTCCACCCTGGGCCTCTGTAGATGGGTCAGAATCACGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR TCA 90 bp CTGGAGGTCATCCATGTTGATCTTGGTGGCGGGTGGAGACTCTCCGTCAGCCGTGCGACAAACACACACTaGACCACATGCTTTAGCCCC +
Preference number: 2 (lower is better)
Translates to: LEVIHVDLGGGWRLSVSRATNTH*TTCFSP
Trigger: GGGGCTAAAGCATGTGGTTCAGTGTGTGTTTGTCGC...ACGGCTGACGGAGAGTCTCCACCCGCCACCAAGATCAACATGGATGACCTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR TCA 90 bp GTCATCCATGTTGATCTTGGTGGCGGGTGGAGACTCTCCGTCAGCCGTGATGGATGTACAGCTTTCCCTTaGAGAGCTGGACCCCGATGC +
Preference number: 2 (lower is better)
Translates to: VIHVDLGGGWRLSVSRDGCTAFP*RAGPRC
Trigger: GCATCGGGGTCCAGCTCTTCAAGGGAAAGCTGTACA...TCCATCACGGCTGACGGAGAGTCTCCACCCGCCACCAAGATCAACATGGATGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR GCA 90 bp CTTTGCCACTTCAGGTGCTGTGGCTCAAACCTCTTAAAGTCATCCCAGGAAAAATCCTCTCCCCGCCTCTaGAGACGCAGCCGGGCGCCT +
Preference number: 2 (lower is better)
Translates to: LCHFRCCGSNLLKSSQEKSSPRL*RRSRAP
Trigger: AGGCGCCCGGCTGCGTCTGCAGAGGCGGGGAGAGGA...TTTTTCCTGGGATGACTTTAAGAGGTTTGAGCCACAGCACCTGAAGTGGCAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR GCA 90 bp TTTGCTTCTCTTGTGACTCTACAGGAGAGACTTCTCTTTTCTCCTGGCCAATGGAGTGAGCCGCACCACTaGCGGCCCGACGCCCATCCC +
Preference number: 2 (lower is better)
Translates to: FASLVTLQERLLFSPGQWSEPHH*RPDAHP
Trigger: GGGATGGGCGTCGGGCCGGCAGTGGTGCGGCTCACT...CCATTGGCCAGGAGAAAAGAGAAGTCTCTCCTGTAGAGTCACAAGAGAAGCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR GCA 90 bp CTGGAGGTCATCCATGTTGATCTTGGTGGCGGGTGGAGACTCTCCGTCAGCCGTCAGCAGGGCCTTGTTTaGCGTGTCTTGGACTTCTGT +
Preference number: 2 (lower is better)
Translates to: LEVIHVDLGGGWRLSVSRQQGLV*RVLDFC
Trigger: ACAGAAGTCCAAGACACGGCAAACAAGGCCCTGCTG...ACGGCTGACGGAGAGTCTCCACCCGCCACCAAGATCAACATGGATGACCTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR GCA 90 bp ATGTTGATCTTGGTGGCGGGTGGAGACTCTCCGTCAGCCGTGATGGATTTCAGCCTTGGATTCCCCCACTaGCGGCTTCTCCACCAACTC +
Preference number: 2 (lower is better)
Translates to: MLILVAGGDSPSAVMDFSLGFPH*RLLHQL
Trigger: GAGTTGGTGGAGAAGCCGGCAGTGGGGGAATCCAAG...GCTGAAATCCATCACGGCTGACGGAGAGTCTCCACCCGCCACCAAGATCAACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR GCA 90 bp GGGGCCCTTGTCTTCCGTGTGGGAGTCGATGGAGCGGTACAGCAGCTCTGGCCACTTCACGACATTGATTaGACTGGACTGGATGCCAAA +
Preference number: 2 (lower is better)
Translates to: GALVFRVGVDGAVQQLWPLHDID*TGLDAK
Trigger: TTTGGCATCCAGTCCAGTGCAATCAATGTCGTGAAG...TGGCCAGAGCTGCTGTACCGCTCCATCGACTCCCACACGGAAGACAAGGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR GCA 90 bp CCAGGGAAGGTTGTCTGTATGTCTCCCGTGCTCAGGAGGCATGATTCAGAAAGTCGGCTAGGCAGTGACTaGACTCCTGGCCTCAGCTGG +
Preference number: 2 (lower is better)
Translates to: PGKVVCMSPVLRRHDSESRLGSD*TPGLSW
Trigger: CCAGCTGAGGCCAGGAGTGCAGTCACTGCCTAGCCG...ACTTTCTGAATCATGCCTCCTGAGCACGGGAGACATACAGACAACCTTCCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR CCA 90 bp GAAATGAATGTACAATGTATGTCTGATTCACACCAGGGGAAGTGGCACAGTGCCTCAGCACCACCTGGTTaGGCGGAGCCGGCGGCGCAG +
Preference number: 2 (lower is better)
Translates to: EMNVQCMSDSHQGKWHSASAPPG*AEPAAQ
Trigger: CTGCGCCGCCGGCTCCGCCCAACCAGGTGGTGCTGA...GGCACTGTGCCACTTCCCCTGGTGTGAATCAGACATACATTGTACATTCATTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR CCA 90 bp TCTTCAGCTGCATGGGCAGGAGACATGCTGGGTGGAGAAAAGCTGGGAGAAAGTCAGCTACCTCTTCCATaGGGGATGCGGATGACGGCC +
Preference number: 2 (lower is better)
Translates to: SSAAWAGDMLGGEKLGESQLPLP*GMRMTA
Trigger: GGCCGTCATCCGCATCCCCCATGGAAGAGGTAGCTG...ACTTTCTCCCAGCTTTTCTCCACCCAGCATGTCTCCTGCCCATGCAGCTGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR CCA 90 bp GTTCTGTCCACCCCTGATGCCTGGGAATCAAAGGTCTTTCTCAGAGGCCTACCTTGGTCTCCACCAGGATaGTCTCCAGGATGCCGCCAC +
Preference number: 2 (lower is better)
Translates to: VLSTPDAWESKVFLRGLPWSPPG*SPGCRH
Trigger: GTGGCGGCATCCTGGAGACCATCCTGGTGGAGACCA...AGGTAGGCCTCTGAGAAAGACCTTTGATTCCCAGGCATCAGGGGTGGACAGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR CCA 90 bp CCTTGGCCTTCTCCCTCTCTTTGGAAAACTCTCCGCTCAACACACCGAGAACCATGGTCTCCACCAGGATaGTCTCCAGGATGCCGCCAC +
Preference number: 2 (lower is better)
Translates to: PWPSPSLWKTLRSTHREPWSPPG*SPGCRH
Trigger: GTGGCGGCATCCTGGAGACCATCCTGGTGGAGACCA...TGGTTCTCGGTGTGTTGAGCGGAGAGTTTTCCAAAGAGAGGGAGAAGGCCAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CCA 90 bp CTCGATGTCACCTCCAGCCACGTTTTCGGTGTTGACGGACTCGGTCTCACTGGTCACGGAGATGCCCAGTaGGGACATGATCTTGGTCTC +
Preference number: 2 (lower is better)
Translates to: LDVTSSHVFGVDGLGLTGHGDAQ*GHDLGL
Trigger: GAGACCAAGATCATGTCCCCACTGGGCATCTCCGTG...ACCAGTGAGACCGAGTCCGTCAACACCGAAAACGTGGCTGGAGGTGACATCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CCA 90 bp ATGTTGATCTTGGTGGCGGGTGGAGACTCTCCGTCAGCCGTGATGGATTTCAGCCTGGGCTGGCAGTCCTaGCCAGCTTCTTTCTCTCCT +
Preference number: 2 (lower is better)
Translates to: MLILVAGGDSPSAVMDFSLGWQS*PASFSP
Trigger: AGGAGAGAAAGAAGCTGGCCAGGACTGCCAGCCCAG...GCTGAAATCCATCACGGCTGACGGAGAGTCTCCACCCGCCACCAAGATCAACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CCA 90 bp GAACAGGGCCAGCAGGGCCTTGTTTGCCGTGTCTTGGACTTCTGTGAGCCAGTTCAATCTTCTCCTCCTTaGATTCCCCCACTGCCGGCT +
Preference number: 2 (lower is better)
Translates to: EQGQQGLVCRVLDFCEPVQSSPP*IPPLPA
Trigger: AGCCGGCAGTGGGGGAATCCAAGGAGGAGAAGATTG...AACTGGCTCACAGAAGTCCAAGACACGGCAAACAAGGCCCTGCTGGCCCTGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CCA 90 bp GTTCTGTCCACCCCTGATGCCTGGGAATCAAAGGTCTTTCTCAGAGGCCTACCTGATCTTGGTGGCGGGTaGAGACTCTCCGTCAGCCGT +
Preference number: 2 (lower is better)
Translates to: VLSTPDAWESKVFLRGLPDLGGG*RLSVSR
Trigger: ACGGCTGACGGAGAGTCTCCACCCGCCACCAAGATC...AGGTAGGCCTCTGAGAAAGACCTTTGATTCCCAGGCATCAGGGGTGGACAGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR CCA 90 bp TGGCTGCCAGAACATTGTCAAAGTCAAACTTGCTGTTCTCCCAGCTGCGGGGTTCTCAGAGAGTGGTCGTaGGCGAGGGCCGACAGGCAT +
Preference number: 2 (lower is better)
Translates to: WLPEHCQSQTCCSPSCGVLREWS*ARADRH
Trigger: ATGCCTGTCGGCCCTCGCCCACGACCACTCTCTGAG...AACCCCGCAGCTGGGAGAACAGCAAGTTTGACTTTGACAATGTTCTGGCAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CCA 90 bp CCTTGCATTCCGCCTCTGTCTGCTTGGAACTGTCTGAACAGGTGTACAGCTTTCCTGAAGGAGGTGTGCTaGACCGGGTCCTCAGCAGCC +
Preference number: 2 (lower is better)
Translates to: PCIPPLSAWNCLNRCTAFLKEVC*TGSSAA
Trigger: GGCTGCTGAGGACCCGGTCCAGCACACCTCCTTCAG...GAAAGCTGTACACCTGTTCAGACAGTTCCAAGCAGACAGAGGCGGAATGCAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CCA 90 bp GATGATGGGGTGGTCAACCTCCCCGTCTTTGTACGTGATGTAGTTGCCCTTGCAGGCCTGGTTCAGCTCTaGGCAGGTGTAGGAGTTGGG +
Preference number: 2 (lower is better)
Translates to: DDGVVNLPVFVRDVVALAGLVQL*AGVGVG
Trigger: CCCAACTCCTACACCTGCCCAGAGCTGAACCAGGCC...TGCAAGGGCAACTACATCACGTACAAAGACGGGGAGGTTGACCACCCCATCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR CCA 90 bp CCTTGCATTCCGCCTCTGTCTGCTTGGAACTGTCTGAACAGGTGTACAGCTTTCGACCACCTGGAGACTTaGGACTCCGGACACCAGCCG +
Preference number: 2 (lower is better)
Translates to: PCIPPLSAWNCLNRCTAFDHLET*DSGHQP
Trigger: CGGCTGGTGTCCGGAGTCCCAAGTCTCCAGGTGGTC...GAAAGCTGTACACCTGTTCAGACAGTTCCAAGCAGACAGAGGCGGAATGCAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CCA 90 bp TCACTGGTGGGCATGCTCATGTTTCGGGGCTTCTCCTCATCCATGCCTTCGTCCGAATTCAGGACCACCTaGAGACTTGGGACTCCGGAC +
Preference number: 2 (lower is better)
Translates to: SLVGMLMFRGFSSSMPSSEFRTT*RLGTPD
Trigger: GTCCGGAGTCCCAAGTCTCCAGGTGGTCCTGAATTC...GGACGAAGGCATGGATGAGGAGAAGCCCCGAAACATGAGCATGCCCACCAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CCA 90 bp TTATCGAATGTGCTCCTCCGGGTCTGCATCTCATCAAAGTTGAACTTTCCTCCACACACCGTGCCGTTCTaGCACTGCCGCCCGTGGCCC +
Preference number: 2 (lower is better)
Translates to: LSNVLLRVCISSKLNFPPHTVPF*HCRPWP
Trigger: GGGCCACGGGCGGCAGTGCCAGAACGGCACGGTGTG...TGGAGGAAAGTTCAACTTTGATGAGATGCAGACCCGGAGGAGCACATTCGATAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672721.1
ENST00000672806.1
3UTR CAA 90 bp ATGCATAGGTGGCCTGAGGCAGGAAAAGAGAAGGTGCGCACAGCTTaGGGATGCTGGAGACACCTCCTGAAGGGGATCTTTCTGCACAGG +
Preference number: 2 (lower is better)
Translates to: MHRWPEAGKEKVRTA*GCWRHLLKGIFLHR
Trigger: CCTGTGCAGAAAGATCCCCTTCAGGAGGTGTCTCCAGCATCCCAAAGCTGTGCGCACCTTCTCTTTTCCTGCCTCAGGCCACCTATGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR TCA 90 bp GGTTCTGATGGTACTACTTCCATCCAAGGGAGTCACTCTACTGCACCCTCCTTGCGGATGACGGCCCAGTaGCTGAGGGCTCATCAGAAC +
Preference number: 2 (lower is better)
Translates to: GSDGTTSIQGSHSTAPSLRMTAQ*LRAHQN
Trigger: GTTCTGATGAGCCCTCAGTCACTGGGCCGTCATCCG...CAAGGAGGGTGCAGTAGAGTGACTCCCTTGGATGGAAGTAGTACCATCAGAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR TCA 90 bp GTTCTGTCCACCCCTGATGCCTGGGAATCAAAGGTCTTTCTCAGAGGCCTACCTGTAGCGGCTGAACTTTaGCTTGGAGATCCGGTGGGC +
Preference number: 2 (lower is better)
Translates to: VLSTPDAWESKVFLRGLPVAAEL*LGDPVG
Trigger: GCCCACCGGATCTCCAAGTCAAAGTTCAGCCGCTAC...AGGTAGGCCTCTGAGAAAGACCTTTGATTCCCAGGCATCAGGGGTGGACAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR TCA 90 bp CTCGATGTCACCTCCAGCCACGTTTTCGGTGTTGACGGACTCGGTCTCACTGGTTGTCTTGGACTTCTGTaGGCCAGTTGGGCTGGTTGT +
Preference number: 2 (lower is better)
Translates to: LDVTSSHVFGVDGLGLTGCLGLL*ASWAGC
Trigger: ACAACCAGCCCAACTGGCTCACAGAAGTCCAAGACA...ACCAGTGAGACCGAGTCCGTCAACACCGAAAACGTGGCTGGAGGTGACATCGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR TCA 90 bp CTCGATGTCACCTCCAGCCACGTTTTCGGTGTTGACGGACTCGGTCTCACTGGTAGCAGTCAAAGCGGTTaGAGAGGGACACGAAGTAGG +
Preference number: 2 (lower is better)
Translates to: LDVTSSHVFGVDGLGLTGSSQSG*RGTRSR
Trigger: CCTACTTCGTGTCCCTCTTCAACCGCTTTGACTGCT...ACCAGTGAGACCGAGTCCGTCAACACCGAAAACGTGGCTGGAGGTGACATCGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR TCA 90 bp GTGAGGAGGGACTGGGGGAAGTTATCGAATGTGCTCCTCCGGGTCTGCATCTCAAGCAGTCAAAGCGGTTaGAGAGGGACACGAAGTAGG +
Preference number: 2 (lower is better)
Translates to: VRRDWGKLSNVLLRVCISSSQSG*RGTRSR
Trigger: CCTACTTCGTGTCCCTCTTCAACCGCTTTGACTGCT...TGAGATGCAGACCCGGAGGAGCACATTCGATAACTTCCCCCAGTCCCTCCTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR TCA 90 bp TCTGTGTTGCCTCTGGGAAAACTACCAAAGGAGGGAGGGGAAGGCTCAGTAAGCTCCCCGGTCAGGATCTaGAACACAGTGAGGAGGGAC +
Preference number: 2 (lower is better)
Translates to: SVLPLGKLPKEGGEGSVSSPVRI*NTVRRD
Trigger: GTCCCTCCTCACTGTGTTTCAGATCCTGACCGGGGA...GCTTACTGAGCCTTCCCCTCCCTCCTTTGGTAGTTTTCCCAGAGGCAACACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR TCA 90 bp GGCTTCTGGCATGGGCACTGCCTTTTCCTTAAGGTGAAGCTCAGAGAGTGGTCGCCTTTTGGGCAGATGTaGGGCTCTCAGCATCAGCCA +
Preference number: 2 (lower is better)
Translates to: GFWHGHCLFLKVKLREWSPFGQM*GSQHQP
Trigger: TGGCTGATGCTGAGAGCCTCACATCTGCCCAAAAGG...CGACCACTCTCTGAGCTTCACCTTAAGGAAAAGGCAGTGCCCATGCCAGAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR TCA 90 bp GACCATGTGTGGGCACAGACACCGTGTACCCTAAGGAAGGTGTCAGGGCAACGCACTCTCCGTCAGCCGTaGTGGATTTCAGCTCAATCT +
Preference number: 2 (lower is better)
Translates to: DHVWAQTPCTLRKVSGQRTLRQP*WISAQS
Trigger: AGATTGAGCTGAAATCCATCACGGCTGACGGAGAGT...GCGTTGCCCTGACACCTTCCTTAGGGTACACGGTGTCTGTGCCCACACATGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR TCA 90 bp GACCATGTGTGGGCACAGACACCGTGTACCCTAAGGAAGGTGTCAGGGCAACGCCGAAGTAGGTGGAGTTaGCCACGTACCACACTTTGT +
Preference number: 2 (lower is better)
Translates to: DHVWAQTPCTLRKVSGQRRSRWS*PRTTLC
Trigger: ACAAAGTGTGGTACGTGGTCAACTCCACCTACTTCG...GCGTTGCCCTGACACCTTCCTTAGGGTACACGGTGTCTGTGCCCACACATGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR TCA 90 bp ATGTTGATCTTGGTGGCGGGTGGAGACTCTCCGTCAGCCGTGATGGATTTCAGCTGCACTGGAACACCGTaGGCATGGCGAAGGCAAAGT +
Preference number: 2 (lower is better)
Translates to: MLILVAGGDSPSAVMDFSCTGTP*AWRRQS
Trigger: ACTTTGCCTTCGCCATGCTCACGGTGTTCCAGTGCA...GCTGAAATCCATCACGGCTGACGGAGAGTCTCCACCCGCCACCAAGATCAACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR GCA 90 bp GTTTTTGCTTTCAAACGGCCCCAGATTCAGATCTTCCCACAGCTAAACCAGAAATCCTCTCCCCGCCTCTaGAGACGCAGCCGGGCGCCT +
Preference number: 2 (lower is better)
Translates to: VFAFKRPQIQIFPQLNQKSSPRL*RRSRAP
Trigger: AGGCGCCCGGCTGCGTCTGCAGAGGCGGGGAGAGGA...TTTCTGGTTTAGCTGTGGGAAGATCTGAATCTGGGGCCGTTTGAAAGCAAAAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR GCA 90 bp GTTTTTGCTTTCAAACGGCCCCAGATTCAGATCTTCCCACAGCTAAACCAGAAAAGTGAGCCGCACCACTaGCGGCCCGACGCCCATCCC +
Preference number: 2 (lower is better)
Translates to: VFAFKRPQIQIFPQLNQKSEPHH*RPDAHP
Trigger: GGGATGGGCGTCGGGCCGGCAGTGGTGCGGCTCACT...TTTCTGGTTTAGCTGTGGGAAGATCTGAATCTGGGGCCGTTTGAAAGCAAAAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR GCA 90 bp GAACAGGGCCAGCAGGGCCTTGTTTGCCGTGTCTTGGACTTCTGTGAGCCAGTTCAGCAGGGCCTTGTTTaGCGTGTCTTGGACTTCTGT +
Preference number: 2 (lower is better)
Translates to: EQGQQGLVCRVLDFCEPVQQGLV*RVLDFC
Trigger: ACAGAAGTCCAAGACACGGCAAACAAGGCCCTGCTG...AACTGGCTCACAGAAGTCCAAGACACGGCAAACAAGGCCCTGCTGGCCCTGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR GCA 90 bp CTCGATGTCACCTCCAGCCACGTTTTCGGTGTTGACGGACTCGGTCTCACTGGTAGGATGCCACCAGGTTaGTCAAGGAGTTCCAGTACC +
Preference number: 2 (lower is better)
Translates to: LDVTSSHVFGVDGLGLTGRMPPG*SRSSST
Trigger: GGTACTGGAACTCCTTGAGCAACCTGGTGGCATCCT...ACCAGTGAGACCGAGTCCGTCAACACCGAAAACGTGGCTGGAGGTGACATCGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR GCA 90 bp CTCGATGTCACCTCCAGCCACGTTTTCGGTGTTGACGGACTCGGTCTCACTGGTTTTCCTCCAAAGAGCTaGATCCCCAGGAGGGAGAAG +
Preference number: 2 (lower is better)
Translates to: LDVTSSHVFGVDGLGLTGFPPKS*IPRREK
Trigger: CTTCTCCCTCCTGGGGATGCAGCTCTTTGGAGGAAA...ACCAGTGAGACCGAGTCCGTCAACACCGAAAACGTGGCTGGAGGTGACATCGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR GCA 90 bp TCACTGGTGGGCATGCTCATGTTTCGGGGCTTCTCCTCATCCATGCCTTCGTCCCTGGAACATCTGCTATaGCCTCCTGGTTGTAGCAGG +
Preference number: 2 (lower is better)
Translates to: SLVGMLMFRGFSSSMPSSLEHLL*PPGCSR
Trigger: CCTGCTACAACCAGGAGGGCATAGCAGATGTTCCAG...GGACGAAGGCATGGATGAGGAGAAGCCCCGAAACATGAGCATGCCCACCAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CCA 90 bp CTTTGCCACTTCAGGTGCTGTGGCTCAAACCTCTTAAAGTCATCCCAGGAAAAAAGAGCTCCGCGCCCCTaGAGGCCTCCTCCTCCCTCT +
Preference number: 2 (lower is better)
Translates to: LCHFRCCGSNLLKSSQEKRAPRP*RPPPPS
Trigger: AGAGGGAGGAGGAGGCCTCCAGGGGCGCGGAGCTCT...TTTTTCCTGGGATGACTTTAAGAGGTTTGAGCCACAGCACCTGAAGTGGCAAAG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR CCA 90 bp GAAATGAATGTACAATGTATGTCTGATTCACACCAGGGGAAGTGGCACAGTGCCAAGCTCAGCACCACCTaGTTGGGCGGAGCCGGCGGC +
Preference number: 2 (lower is better)
Translates to: EMNVQCMSDSHQGKWHSAKLSTT*LGGAGG
Trigger: GCCGCCGGCTCCGCCCAACCAGGTGGTGCTGAGCTT...GGCACTGTGCCACTTCCCCTGGTGTGAATCAGACATACATTGTACATTCATTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR CCA 90 bp TTTGCTTCTCTTGTGACTCTACAGGAGAGACTTCTCTTTTCTCCTGGCCAATGGAAGCTCAGCACCACCTaGTTGGGCGGAGCCGGCGGC +
Preference number: 2 (lower is better)
Translates to: FASLVTLQERLLFSPGQWKLSTT*LGGAGG
Trigger: GCCGCCGGCTCCGCCCAACCAGGTGGTGCTGAGCTT...CCATTGGCCAGGAGAAAAGAGAAGTCTCTCCTGTAGAGTCACAAGAGAAGCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR CCA 90 bp TTATCGAATGTGCTCCTCCGGGTCTGCATCTCATCAAAGTTGAACTTTCCTCCAGACTTGGAGATCCGGTaGGCCAGCCTGGCCCCGCAG +
Preference number: 2 (lower is better)
Translates to: LSNVLLRVCISSKLNFPPDLEIR*ASLAPQ
Trigger: CTGCGGGGCCAGGCTGGCCCACCGGATCTCCAAGTC...TGGAGGAAAGTTCAACTTTGATGAGATGCAGACCCGGAGGAGCACATTCGATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CCA 90 bp GATCTTGGTGGCGGGTGGAGACTCTCCGTCAGCCGTGATGGATTTCAGCTCAATCACGGAGATGCCCAGTaGGGACATGATCTTGGTCTC +
Preference number: 2 (lower is better)
Translates to: DLGGGWRLSVSRDGFQLNHGDAQ*GHDLGL
Trigger: GAGACCAAGATCATGTCCCCACTGGGCATCTCCGTG...ATTGAGCTGAAATCCATCACGGCTGACGGAGAGTCTCCACCCGCCACCAAGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CCA 90 bp TCATTTTCATTGGGCTGGAGGTCATCCATGTTGATCTTGGTGGCGGGTGGAGACGGAGCAGGGAGGCGATaGAGCGCACAGAGTTCAGCA +
Preference number: 2 (lower is better)
Translates to: SFSLGWRSSMLILVAGGDGAGRR*SAQSSA
Trigger: TGCTGAACTCTGTGCGCTCCATCGCCTCCCTGCTCC...GTCTCCACCCGCCACCAAGATCAACATGGATGACCTCCAGCCCAATGAAAATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CCA 90 bp CCTTGCATTCCGCCTCTGTCTGCTTGGAACTGTCTGAACAGGTGTACAGCTTTCGGAGCAGGGAGGCGATaGAGCGCACAGAGTTCAGCA +
Preference number: 2 (lower is better)
Translates to: PCIPPLSAWNCLNRCTAFGAGRR*SAQSSA
Trigger: TGCTGAACTCTGTGCGCTCCATCGCCTCCCTGCTCC...GAAAGCTGTACACCTGTTCAGACAGTTCCAAGCAGACAGAGGCGGAATGCAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CCA 90 bp GGCTTCTGGCATGGGCACTGCCTTTTCCTTAAGGTGAAGCTCAGAGAGTGGTCGGTTTCTTCTCTGGGCTaGCAGTCCTGGCCAGCTTCT +
Preference number: 2 (lower is better)
Translates to: GFWHGHCLFLKVKLREWSVSSLG*QSWPAS
Trigger: AGAAGCTGGCCAGGACTGCCAGCCCAGAGAAGAAAC...CGACCACTCTCTGAGCTTCACCTTAAGGAAAAGGCAGTGCCCATGCCAGAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CCA 90 bp CCTTGCATTCCGCCTCTGTCTGCTTGGAACTGTCTGAACAGGTGTACAGCTTTCGATCTTGGTGGCGGGTaGAGACTCTCCGTCAGCCGT +
Preference number: 2 (lower is better)
Translates to: PCIPPLSAWNCLNRCTAFDLGGG*RLSVSR
Trigger: ACGGCTGACGGAGAGTCTCCACCCGCCACCAAGATC...GAAAGCTGTACACCTGTTCAGACAGTTCCAAGCAGACAGAGGCGGAATGCAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CCA 90 bp CTGGAGGTCATCCATGTTGATCTTGGTGGCGGGTGGAGACTCTCCGTCAGCCGTACAATGCGGTGGCACTaGAGGCGAAACCTGTTGTTA +
Preference number: 2 (lower is better)
Translates to: LEVIHVDLGGGWRLSVSRTMRWH*RRNLLL
Trigger: TAACAACAGGTTTCGCCTCCAGTGCCACCGCATTGT...ACGGCTGACGGAGAGTCTCCACCCGCCACCAAGATCAACATGGATGACCTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CCA 90 bp CTGGAGGTCATCCATGTTGATCTTGGTGGCGGGTGGAGACTCTCCGTCAGCCGTGCATTGCCTAGGATATaGTTCCTGAAGGAGGTGTGC +
Preference number: 2 (lower is better)
Translates to: LEVIHVDLGGGWRLSVSRALPRI*FLKEVC
Trigger: GCACACCTCCTTCAGGAACCATATCCTAGGCAATGC...ACGGCTGACGGAGAGTCTCCACCCGCCACCAAGATCAACATGGATGACCTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CCA 90 bp TGTCCTGGTGGTGAATCCCGGCCAGTGGATACCCGTGATTCTGACCCATCTACAGGTTGGATGATGGGGTaGTCAACCTCCCCGTCTTTG +
Preference number: 2 (lower is better)
Translates to: CPGGESRPVDTRDSDPSTGWMMG*STSPSL
Trigger: CAAAGACGGGGAGGTTGACCACCCCATCATCCAACC...TGTAGATGGGTCAGAATCACGGGTATCCACTGGCCGGGATTCACCACCAGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR CCA 90 bp TCATTTTCATTGGGCTGGAGGTCATCCATGTTGATCTTGGTGGCGGGTGGAGACTCCCAGCTGCGGGGTTaGATGATGGGGTGGTCAACC +
Preference number: 2 (lower is better)
Translates to: SFSLGWRSSMLILVAGGDSQLRG*MMGWST
Trigger: GGTTGACCACCCCATCATCCAACCCCGCAGCTGGGA...GTCTCCACCCGCCACCAAGATCAACATGGATGACCTCCAGCCCAATGAAAATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CCA 90 bp GACCATGTGTGGGCACAGACACCGTGTACCCTAAGGAAGGTGTCAGGGCAACGCGTGTACTTGCTTCTCTaGAGAAGGCAGGAAACCACC +
Preference number: 2 (lower is better)
Translates to: DHVWAQTPCTLRKVSGQRVYLLL*RRQETT
Trigger: GGTGGTTTCCTGCCTTCTCCAGAGAAGCAAGTACAC...GCGTTGCCCTGACACCTTCCTTAGGGTACACGGTGTCTGTGCCCACACATGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR CCA 90 bp CTGGAGGTCATCCATGTTGATCTTGGTGGCGGGTGGAGACTCTCCGTCAGCCGTAGGGTCATCTTCTGCTaGAACATCTGCTATGCCCTC +
Preference number: 2 (lower is better)
Translates to: LEVIHVDLGGGWRLSVSRRVIFC*NICYAL
Trigger: GAGGGCATAGCAGATGTTCCAGCAGAAGATGACCCT...ACGGCTGACGGAGAGTCTCCACCCGCCACCAAGATCAACATGGATGACCTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CCA 90 bp GGCTTCTGGCATGGGCACTGCCTTTTCCTTAAGGTGAAGCTCAGAGAGTGGTCGACTCGGTCTCACTGGTaGGCATGCTCATGTTTCGGG +
Preference number: 2 (lower is better)
Translates to: GFWHGHCLFLKVKLREWSTRSHW*ACSCFG
Trigger: CCCGAAACATGAGCATGCCCACCAGTGAGACCGAGT...CGACCACTCTCTGAGCTTCACCTTAAGGAAAAGGCAGTGCCCATGCCAGAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR TCA 90 bp TCTTCAGCTGCATGGGCAGGAGACATGCTGGGTGGAGAAAAGCTGGGAGAAAGTAAGGCTGCTCCAGAGTaGGGAAGGGATGGAGAAAGG +
Preference number: 2 (lower is better)
Translates to: SSAAWAGDMLGGEKLGESKAAPE*GRDGER
Trigger: CCTTTCTCCATCCCTTCCTCACTCTGGAGCAGCCTT...ACTTTCTCCCAGCTTTTCTCCACCCAGCATGTCTCCTGCCCATGCAGCTGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR TCA 90 bp CCTTGCATTCCGCCTCTGTCTGCTTGGAACTGTCTGAACAGGTGTACAGCTTTCCCACGTTTTCGGTGTTaGCGGACTCGGTCTCACTGG +
Preference number: 2 (lower is better)
Translates to: PCIPPLSAWNCLNRCTAFPRFRC*RTRSHW
Trigger: CCAGTGAGACCGAGTCCGTCAACACCGAAAACGTGG...GAAAGCTGTACACCTGTTCAGACAGTTCCAAGCAGACAGAGGCGGAATGCAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR TCA 90 bp AGCTTCTTTCTCTCCTTCTCCTCTTCCTCCTCCTTTTGGGCAGATGTGAGGCTCGTAGCGGCTGAACTTTaGCTTGGAGATCCGGTGGGC +
Preference number: 2 (lower is better)
Translates to: SFFLSFSSSSSFWADVRLVAAEL*LGDPVG
Trigger: GCCCACCGGATCTCCAAGTCAAAGTTCAGCCGCTAC...GAGCCTCACATCTGCCCAAAAGGAGGAGGAAGAGGAGAAGGAGAGAAAGAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR TCA 90 bp AGCTTCTTTCTCTCCTTCTCCTCTTCCTCCTCCTTTTGGGCAGATGTGAGGCTCTGCCCAGTGGGGACATaGTCTTGGTCTCCACCAGGA +
Preference number: 2 (lower is better)
Translates to: SFFLSFSSSSSFWADVRLCPVGT*SWSPPG
Trigger: TCCTGGTGGAGACCAAGATCATGTCCCCACTGGGCA...GAGCCTCACATCTGCCCAAAAGGAGGAGGAAGAGGAGAAGGAGAGAAAGAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR TCA 90 bp TTATCGAATGTGCTCCTCCGGGTCTGCATCTCATCAAAGTTGAACTTTCCTCCAGCAGCCGGACGCATCTaGGCACGGAGATGCCCAGTG +
Preference number: 2 (lower is better)
Translates to: LSNVLLRVCISSKLNFPPAAGRI*ARRCPV
Trigger: CACTGGGCATCTCCGTGCTCAGATGCGTCCGGCTGC...TGGAGGAAAGTTCAACTTTGATGAGATGCAGACCCGGAGGAGCACATTCGATAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR TCA 90 bp CCCGTGATTCTGACCCATCTACAGAGGCCCAGGGTGGAAGGTGTGGCTCATACCAGATCTTCACGACATTaGTTGCACTGGACTGGATGC +
Preference number: 2 (lower is better)
Translates to: PVILTHLQRPRVEGVAHTRSSRH*LHWTGC
Trigger: GCATCCAGTCCAGTGCAATCAATGTCGTGAAGATCT...GGTATGAGCCACACCTTCCACCCTGGGCCTCTGTAGATGGGTCAGAATCACGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR TCA 90 bp CTGGAGGTCATCCATGTTGATCTTGGTGGCGGGTGGAGACTCTCCGTCAGCCGTAGATCTTCACGACATTaGTTGCACTGGACTGGATGC +
Preference number: 2 (lower is better)
Translates to: LEVIHVDLGGGWRLSVSRRSSRH*LHWTGC
Trigger: GCATCCAGTCCAGTGCAATCAATGTCGTGAAGATCT...ACGGCTGACGGAGAGTCTCCACCCGCCACCAAGATCAACATGGATGACCTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR TCA 90 bp TGTCCTGGTGGTGAATCCCGGCCAGTGGATACCCGTGATTCTGACCCATCTACAGCGACAAACACACACTaGACCACATGCTTTAGCCCC +
Preference number: 2 (lower is better)
Translates to: CPGGESRPVDTRDSDPSTATNTH*TTCFSP
Trigger: GGGGCTAAAGCATGTGGTTCAGTGTGTGTTTGTCGC...TGTAGATGGGTCAGAATCACGGGTATCCACTGGCCGGGATTCACCACCAGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR TCA 90 bp GATGATGGGGTGGTCAACCTCCCCGTCTTTGTACGTGATGTAGTTGCCCTTGCAACTGCAGCAGGGTGGTaGCAATCACGATGTTCCCGA +
Preference number: 2 (lower is better)
Translates to: DDGVVNLPVFVRDVVALATAAGW*QSRCSR
Trigger: TCGGGAACATCGTGATTGTCACCACCCTGCTGCAGT...TGCAAGGGCAACTACATCACGTACAAAGACGGGGAGGTTGACCACCCCATCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR TCA 90 bp TCACTGGTGGGCATGCTCATGTTTCGGGGCTTCTCCTCATCCATGCCTTCGTCCAGTTGTCAAAGTTGGTaGTGCCGTGCTTGGGACCAT +
Preference number: 2 (lower is better)
Translates to: SLVGMLMFRGFSSSMPSSSCQSW*CRAWDH
Trigger: ATGGTCCCAAGCACGGCATCACCAACTTTGACAACT...GGACGAAGGCATGGATGAGGAGAAGCCCCGAAACATGAGCATGCCCACCAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR GCA 90 bp TCTTCAGCTGCATGGGCAGGAGACATGCTGGGTGGAGAAAAGCTGGGAGAAAGTCACGGGCAGGACATATaGACACAGACAACCCACCAC +
Preference number: 2 (lower is better)
Translates to: SSAAWAGDMLGGEKLGESHGQDI*TQTTHH
Trigger: GTGGTGGGTTGTCTGTGTGCATATGTCCTGCCCGTG...ACTTTCTCCCAGCTTTTCTCCACCCAGCATGTCTCCTGCCCATGCAGCTGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR GCA 90 bp TCTTCAGCTGCATGGGCAGGAGACATGCTGGGTGGAGAAAAGCTGGGAGAAAGTCCTTTCTCGAGCCCCTaGTGTCCTTGTTGGGTAGAG +
Preference number: 2 (lower is better)
Translates to: SSAAWAGDMLGGEKLGESPFSSP*CPCWVE
Trigger: CTCTACCCAACAAGGACAGCAGGGGCTCGAGAAAGG...ACTTTCTCCCAGCTTTTCTCCACCCAGCATGTCTCCTGCCCATGCAGCTGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR GCA 90 bp ATGTTGATCTTGGTGGCGGGTGGAGACTCTCCGTCAGCCGTGATGGATTTCAGCCAGCAGGGCCTTGTTTaGCGTGTCTTGGACTTCTGT +
Preference number: 2 (lower is better)
Translates to: MLILVAGGDSPSAVMDFSQQGLV*RVLDFC
Trigger: ACAGAAGTCCAAGACACGGCAAACAAGGCCCTGCTG...GCTGAAATCCATCACGGCTGACGGAGAGTCTCCACCCGCCACCAAGATCAACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR GCA 90 bp ATGTTGATCTTGGTGGCGGGTGGAGACTCTCCGTCAGCCGTGATGGATTTCAGCAGGATGCCACCAGGTTaGTCAAGGAGTTCCAGTACC +
Preference number: 2 (lower is better)
Translates to: MLILVAGGDSPSAVMDFSRMPPG*SRSSST
Trigger: GGTACTGGAACTCCTTGAGCAACCTGGTGGCATCCT...GCTGAAATCCATCACGGCTGACGGAGAGTCTCCACCCGCCACCAAGATCAACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR GCA 90 bp TCTGCATTGCCTAGGATATGGTTCCTGAAGGAGGTGTGCTGGACCGGGTCCTCATTTCCTCCAAAGAGCTaGATCCCCAGGAGGGAGAAG +
Preference number: 2 (lower is better)
Translates to: SALPRIWFLKEVCWTGSSFPPKS*IPRREK
Trigger: CTTCTCCCTCCTGGGGATGCAGCTCTTTGGAGGAAA...TGAGGACCCGGTCCAGCACACCTCCTTCAGGAACCATATCCTAGGCAATGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR GCA 90 bp CTCGATGTCACCTCCAGCCACGTTTTCGGTGTTGACGGACTCGGTCTCACTGGTGTGCTCCTCCGGGTCTaGATCTCATCAAAGTTGAAC +
Preference number: 2 (lower is better)
Translates to: LDVTSSHVFGVDGLGLTGVLLRV*ISSKLN
Trigger: GTTCAACTTTGATGAGATGCAGACCCGGAGGAGCAC...ACCAGTGAGACCGAGTCCGTCAACACCGAAAACGTGGCTGGAGGTGACATCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR GCA 90 bp CTCGATGTCACCTCCAGCCACGTTTTCGGTGTTGACGGACTCGGTCTCACTGGTGGAAGTTATCGAATGTaGTCCTCCGGGTCTGCATCT +
Preference number: 2 (lower is better)
Translates to: LDVTSSHVFGVDGLGLTGGSYRM*SSGSAS
Trigger: AGATGCAGACCCGGAGGAGCACATTCGATAACTTCC...ACCAGTGAGACCGAGTCCGTCAACACCGAAAACGTGGCTGGAGGTGACATCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR GCA 90 bp CTGGAGGTCATCCATGTTGATCTTGGTGGCGGGTGGAGACTCTCCGTCAGCCGTTTCTGGCATGGGCACTaGCTTTTCCTTAAGGTGAAG +
Preference number: 2 (lower is better)
Translates to: LEVIHVDLGGGWRLSVSRFWHGH*LFLKVK
Trigger: CTTCACCTTAAGGAAAAGGCAGTGCCCATGCCAGAA...ACGGCTGACGGAGAGTCTCCACCCGCCACCAAGATCAACATGGATGACCTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR GCA 90 bp GTCATCCATGTTGATCTTGGTGGCGGGTGGAGACTCTCCGTCAGCCGTGATGGACATTCCGCCTCTGTCTaGTTGGAACTGTCTGAACAG +
Preference number: 2 (lower is better)
Translates to: VIHVDLGGGWRLSVSRDGHSASV*LELSEQ
Trigger: CTGTTCAGACAGTTCCAAGCAGACAGAGGCGGAATG...TCCATCACGGCTGACGGAGAGTCTCCACCCGCCACCAAGATCAACATGGATGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR GCA 90 bp GATGATGGGGTGGTCAACCTCCCCGTCTTTGTACGTGATGTAGTTGCCCTTGCATCTGCAGCTTGTGCATaGCAGCCAGGGTCAACACTG +
Preference number: 2 (lower is better)
Translates to: DDGVVNLPVFVRDVVALASAACA*QPGSTL
Trigger: CAGTGTTGACCCTGGCTGGCATGCACAAGCTGCAGA...TGCAAGGGCAACTACATCACGTACAAAGACGGGGAGGTTGACCACCCCATCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR GCA 90 bp GATGATGGGGTGGTCAACCTCCCCGTCTTTGTACGTGATGTAGTTGCCCTTGCAGGAATCTGCAGCTTGTaGATGCCAGCCAGGGTCAAC +
Preference number: 2 (lower is better)
Translates to: DDGVVNLPVFVRDVVALAGICSL*MPARVN
Trigger: GTTGACCCTGGCTGGCATGCACAAGCTGCAGATTCC...TGCAAGGGCAACTACATCACGTACAAAGACGGGGAGGTTGACCACCCCATCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR CCA 90 bp GGTTCTGATGGTACTACTTCCATCCAAGGGAGTCACTCTACTGCACCCTCCTTGCACGGGCACATGGTGTaGGTGCATATACACGGGCAG +
Preference number: 2 (lower is better)
Translates to: GSDGTTSIQGSHSTAPSLHGHMV*VHIHGQ
Trigger: CTGCCCGTGTATATGCACCCACACCATGTGCCCGTG...CAAGGAGGGTGCAGTAGAGTGACTCCCTTGGATGGAAGTAGTACCATCAGAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR CCA 90 bp GGTTCTGATGGTACTACTTCCATCCAAGGGAGTCACTCTACTGCACCCTCCTTGGGACTGCGTAGTCACTaGTGTGCACGGGCACATGGT +
Preference number: 2 (lower is better)
Translates to: GSDGTTSIQGSHSTAPSLGLRSH*CARAHG
Trigger: ACCATGTGCCCGTGCACACCAGTGACTACGCAGTCC...CAAGGAGGGTGCAGTAGAGTGACTCCCTTGGATGGAAGTAGTACCATCAGAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR CCA 90 bp TCACTGGTGGGCATGCTCATGTTTCGGGGCTTCTCCTCATCCATGCCTTCGTCCACAGTGAGGAGGGACTaGGGGAAGTTATCGAATGTG +
Preference number: 2 (lower is better)
Translates to: SLVGMLMFRGFSSSMPSSTVRRD*GKLSNV
Trigger: CACATTCGATAACTTCCCCCAGTCCCTCCTCACTGT...GGACGAAGGCATGGATGAGGAGAAGCCCCGAAACATGAGCATGCCCACCAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CCA 90 bp GATGATGGGGTGGTCAACCTCCCCGTCTTTGTACGTGATGTAGTTGCCCTTGCAGTTTCTTCTCTGGGCTaGCAGTCCTGGCCAGCTTCT +
Preference number: 2 (lower is better)
Translates to: DDGVVNLPVFVRDVVALAVSSLG*QSWPAS
Trigger: AGAAGCTGGCCAGGACTGCCAGCCCAGAGAAGAAAC...TGCAAGGGCAACTACATCACGTACAAAGACGGGGAGGTTGACCACCCCATCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CCA 90 bp GTCATCCATGTTGATCTTGGTGGCGGGTGGAGACTCTCCGTCAGCCGTGATGGATTCTCCTGTAGTTTCTaGGTTGGGGTAGGGGCTCTT +
Preference number: 2 (lower is better)
Translates to: VIHVDLGGGWRLSVSRDGFSCSF*VGVGAL
Trigger: AAGAGCCCCTACCCCAACCCAGAAACTACAGGAGAA...TCCATCACGGCTGACGGAGAGTCTCCACCCGCCACCAAGATCAACATGGATGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CCA 90 bp GATGATGGGGTGGTCAACCTCCCCGTCTTTGTACGTGATGTAGTTGCCCTTGCAGGTTGGATGATGGGGTaGTCAACCTCCCCGTCTTTG +
Preference number: 2 (lower is better)
Translates to: DDGVVNLPVFVRDVVALAGWMMG*STSPSL
Trigger: CAAAGACGGGGAGGTTGACCACCCCATCATCCAACC...TGCAAGGGCAACTACATCACGTACAAAGACGGGGAGGTTGACCACCCCATCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CCA 90 bp CCTTGCATTCCGCCTCTGTCTGCTTGGAACTGTCTGAACAGGTGTACAGCTTTCCCCTTGTCTTCCGTGTaGGAGTCGATGGAGCGGTAC +
Preference number: 2 (lower is better)
Translates to: PCIPPLSAWNCLNRCTAFPLSSV*ESMERY
Trigger: GTACCGCTCCATCGACTCCCACACGGAAGACAAGGG...GAAAGCTGTACACCTGTTCAGACAGTTCCAAGCAGACAGAGGCGGAATGCAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CCA 90 bp CCTTGCATTCCGCCTCTGTCTGCTTGGAACTGTCTGAACAGGTGTACAGCTTTCACTGGTGCTGGTTCTTaGGGATGTACCTCCGCAGGG +
Preference number: 2 (lower is better)
Translates to: PCIPPLSAWNCLNRCTAFTGAGS*GCTSAG
Trigger: CCCTGCGGAGGTACATCCCCAAGAACCAGCACCAGT...GAAAGCTGTACACCTGTTCAGACAGTTCCAAGCAGACAGAGGCGGAATGCAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR CCA 90 bp AGGAAGGGCACAGATGATCCAAAGAACAGGAATTCTGACCCTGCCTCATTCAGCGGCAGGTGTAGGAGTTaGGGCACTGACCATCGGAGC +
Preference number: 2 (lower is better)
Translates to: RKGTDDPKNRNSDPASFSGRCRS*GTDHRS
Trigger: GCTCCGATGGTCAGTGCCCCAACTCCTACACCTGCC...GCTGAATGAGGCAGGGTCAGAATTCCTGTTCTTTGGATCATCTGTGCCCTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR CCA 90 bp CCTTGCATTCCGCCTCTGTCTGCTTGGAACTGTCTGAACAGGTGTACAGCTTTCTTCCTGGAGTTGGCCTaGTTCAGCTCTGGGCAGGTG +
Preference number: 2 (lower is better)
Translates to: PCIPPLSAWNCLNRCTAFFLELA*FSSGQV
Trigger: CACCTGCCCAGAGCTGAACCAGGCCAACTCCAGGAA...GAAAGCTGTACACCTGTTCAGACAGTTCCAAGCAGACAGAGGCGGAATGCAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR CCA 90 bp GACCATGTGTGGGCACAGACACCGTGTACCCTAAGGAAGGTGTCAGGGCAACGCGATCTGTGTTGCCTCTaGGAAAACTACCAAAGGAGG +
Preference number: 2 (lower is better)
Translates to: DHVWAQTPCTLRKVSGQRDLCCL*ENYQRR
Trigger: CCTCCTTTGGTAGTTTTCCCAGAGGCAACACAGATC...GCGTTGCCCTGACACCTTCCTTAGGGTACACGGTGTCTGTGCCCACACATGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR CCA 90 bp GTCATCCATGTTGATCTTGGTGGCGGGTGGAGACTCTCCGTCAGCCGTGATGGAAGGGTCATCTTCTGCTaGAACATCTGCTATGCCCTC +
Preference number: 2 (lower is better)
Translates to: VIHVDLGGGWRLSVSRDGRVIFC*NICYAL
Trigger: GAGGGCATAGCAGATGTTCCAGCAGAAGATGACCCT...TCCATCACGGCTGACGGAGAGTCTCCACCCGCCACCAAGATCAACATGGATGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672721.1
ENST00000672806.1
3UTR CAA 90 bp CGGAGGCTCCTGCAGGTGTCAATTTCATGCACTTCCCAGGGAAGGTaGTCTGTATGTCTCCCGTGCTCAGGAGGCATGATTCAGAAAGTC +
Preference number: 2 (lower is better)
Translates to: RRLLQVSISCTSQGR*SVCLPCSGGMIQKV
Trigger: GACTTTCTGAATCATGCCTCCTGAGCACGGGAGACATACAGACAACCTTCCCTGGGAAGTGCATGAAATTGACACCTGCAGGAGCCTCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR TCA 90 bp ACCCAGGCTCCGCGTCTGGTCCCAACAGAAATGAATGAAGACGCTGTTCCGGTTAGGTCACGAGAACAGTaGGGCACTTCTGAAACGAAC +
Preference number: 2 (lower is better)
Translates to: TQAPRLVPTEMNEDAVPVRSREQ*GTSETN
Trigger: GTTCGTTTCAGAAGTGCCTCACTGTTCTCGTGACCT...AACCGGAACAGCGTCTTCATTCATTTCTGTTGGGACCAGACGCGGAGCCTGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000327702.12
ENST00000335762.9
ENST00000347598.9
ENST00000399603.6
ENST00000399617.5
ENST00000399634.5
ENST00000399641.6
ENST00000399655.6
ENST00000406454.7
ENST00000642375.2
ENST00000643038.2
ENST00000643528.1
ENST00000643730.1
ENST00000644235.2
ENST00000644369.2
ENST00000646280.1
ENST00000647229.1
ENST00000647327.2
3UTR-3UTR TCA 90 bp GGCCCTTTTTGTGGCCTCTTTGCTGAATTGTTTCTAATCCTTGACAATGATATTTGGGCAGGGACGGAGTaGGCCGCACCACTGCCGGCC +
Preference number: 2 (lower is better)
Translates to: GPFCGLFAELFLILDNDIWAGTE*AAPLPA
Trigger: GGCCGGCAGTGGTGCGGCTCACTCCGTCCCTGCCCA...AATATCATTGTCAAGGATTAGAAACAATTCAGCAAAGAGGCCACAAAAAGGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR TCA 90 bp TCTTCAGCTGCATGGGCAGGAGACATGCTGGGTGGAGAAAAGCTGGGAGAAAGTAGGAGCACGCAGAGTTaGCTTTCAGATGGATCAGGG +
Preference number: 2 (lower is better)
Translates to: SSAAWAGDMLGGEKLGESRSTQS*LSDGSG
Trigger: CCCTGATCCATCTGAAAGTCAACTCTGCGTGCTCCT...ACTTTCTCCCAGCTTTTCTCCACCCAGCATGTCTCCTGCCCATGCAGCTGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR TCA 90 bp GGTTCTGATGGTACTACTTCCATCCAAGGGAGTCACTCTACTGCACCCTCCTTGAAGGCTGCTCCAGAGTaGGGAAGGGATGGAGAAAGG +
Preference number: 2 (lower is better)
Translates to: GSDGTTSIQGSHSTAPSLKAAPE*GRDGER
Trigger: CCTTTCTCCATCCCTTCCTCACTCTGGAGCAGCCTT...CAAGGAGGGTGCAGTAGAGTGACTCCCTTGGATGGAAGTAGTACCATCAGAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR TCA 90 bp GAAATGAATGTACAATGTATGTCTGATTCACACCAGGGGAAGTGGCACAGTGCCTTCCCACCCCCACTGTaGGCTCCGGATGCCTCTTCC +
Preference number: 2 (lower is better)
Translates to: EMNVQCMSDSHQGKWHSAFPPPL*APDASS
Trigger: GGAAGAGGCATCCGGAGCTCACAGTGGGGGTGGGAA...GGCACTGTGCCACTTCCCCTGGTGTGAATCAGACATACATTGTACATTCATTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR TCA 90 bp GGTTCTGATGGTACTACTTCCATCCAAGGGAGTCACTCTACTGCACCCTCCTTGAAGGTCTGCTTCTCCTaGGGTTGCCCCACTGTCTTC +
Preference number: 2 (lower is better)
Translates to: GSDGTTSIQGSHSTAPSLKVCFS*GCPTVF
Trigger: GAAGACAGTGGGGCAACCTCAGGAGAAGCAGACCTT...CAAGGAGGGTGCAGTAGAGTGACTCCCTTGGATGGAAGTAGTACCATCAGAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR TCA 90 bp CTTATCCTCATTTTCATTGGGCTGGAGGTCATCCATGTTGATCTTGGTGGCGGGCCACGTTTTCGGTGTTaGCGGACTCGGTCTCACTGG +
Preference number: 2 (lower is better)
Translates to: LILIFIGLEVIHVDLGGGPRFRC*RTRSHW
Trigger: CCAGTGAGACCGAGTCCGTCAACACCGAAAACGTGG...CCCGCCACCAAGATCAACATGGATGACCTCCAGCCCAATGAAAATGAGGATAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR TCA 90 bp CTTATCCTCATTTTCATTGGGCTGGAGGTCATCCATGTTGATCTTGGTGGCGGGTCCCCGGTCAGGATCTaGAACACAGTGAGGAGGGAC +
Preference number: 2 (lower is better)
Translates to: LILIFIGLEVIHVDLGGGSPVRI*NTVRRD
Trigger: GTCCCTCCTCACTGTGTTTCAGATCCTGACCGGGGA...CCCGCCACCAAGATCAACATGGATGACCTCCAGCCCAATGAAAATGAGGATAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR TCA 90 bp CCTTGCATTCCGCCTCTGTCTGCTTGGAACTGTCTGAACAGGTGTACAGCTTTCCCTTTTGGGCAGATGTaGGGCTCTCAGCATCAGCCA +
Preference number: 2 (lower is better)
Translates to: PCIPPLSAWNCLNRCTAFPFGQM*GSQHQP
Trigger: TGGCTGATGCTGAGAGCCTCACATCTGCCCAAAAGG...GAAAGCTGTACACCTGTTCAGACAGTTCCAAGCAGACAGAGGCGGAATGCAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR TCA 90 bp TCTGCATTGCCTAGGATATGGTTCCTGAAGGAGGTGTGCTGGACCGGGTCCTCAACTCTCCGTCAGCCGTaGTGGATTTCAGCTCAATCT +
Preference number: 2 (lower is better)
Translates to: SALPRIWFLKEVCWTGSSTLRQP*WISAQS
Trigger: AGATTGAGCTGAAATCCATCACGGCTGACGGAGAGT...TGAGGACCCGGTCCAGCACACCTCCTTCAGGAACCATATCCTAGGCAATGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR TCA 90 bp TCTGCATTGCCTAGGATATGGTTCCTGAAGGAGGTGTGCTGGACCGGGTCCTCAGCCTTTTCCTTAAGGTaGAGCTCAGAGAGTGGTCGT +
Preference number: 2 (lower is better)
Translates to: SALPRIWFLKEVCWTGSSAFSLR*SSESGR
Trigger: ACGACCACTCTCTGAGCTTCACCTTAAGGAAAAGGC...TGAGGACCCGGTCCAGCACACCTCCTTCAGGAACCATATCCTAGGCAATGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR TCA 90 bp CTCATTTTCATTGGGCTGGAGGTCATCCATGTTGATCTTGGTGGCGGGTGGAGATGTACAGCTTTCCCTTaGAGAGCTGGACCCCGATGC +
Preference number: 2 (lower is better)
Translates to: LIFIGLEVIHVDLGGGWRCTAFP*RAGPRC
Trigger: GCATCGGGGTCCAGCTCTTCAAGGGAAAGCTGTACA...TCTCCACCCGCCACCAAGATCAACATGGATGACCTCCAGCCCAATGAAAATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR TCA 90 bp TCATTTTCATTGGGCTGGAGGTCATCCATGTTGATCTTGGTGGCGGGTGGAGACTGTACAGCTTTCCCTTaGAGAGCTGGACCCCGATGC +
Preference number: 2 (lower is better)
Translates to: SFSLGWRSSMLILVAGGDCTAFP*RAGPRC
Trigger: GCATCGGGGTCCAGCTCTTCAAGGGAAAGCTGTACA...GTCTCCACCCGCCACCAAGATCAACATGGATGACCTCCAGCCCAATGAAAATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR TCA 90 bp TGGCTGCCAGAACATTGTCAAAGTCAAACTTGCTGTTCTCCCAGCTGCGGGGTTTGCACTGGAACACCGTaGGCATGGCGAAGGCAAAGT +
Preference number: 2 (lower is better)
Translates to: WLPEHCQSQTCCSPSCGVCTGTP*AWRRQS
Trigger: ACTTTGCCTTCGCCATGCTCACGGTGTTCCAGTGCA...AACCCCGCAGCTGGGAGAACAGCAAGTTTGACTTTGACAATGTTCTGGCAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR GCA 90 bp GGTTCTGATGGTACTACTTCCATCCAAGGGAGTCACTCTACTGCACCCTCCTTGGGCACATGGTGTGGGTaGATATACACGGGCAGGACA +
Preference number: 2 (lower is better)
Translates to: GSDGTTSIQGSHSTAPSLGTWCG*IYTGRT
Trigger: TGTCCTGCCCGTGTATATGCACCCACACCATGTGCC...CAAGGAGGGTGCAGTAGAGTGACTCCCTTGGATGGAAGTAGTACCATCAGAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR GCA 90 bp GATGATGGGGTGGTCAACCTCCCCGTCTTTGTACGTGATGTAGTTGCCCTTGCAGACATTAGACTTGACTaGGGCGCGGCACTTCCTTCT +
Preference number: 2 (lower is better)
Translates to: DDGVVNLPVFVRDVVALADIRLD*GAALPS
Trigger: AGAAGGAAGTGCCGCGCCGCAGTCAAGTCTAATGTC...TGCAAGGGCAACTACATCACGTACAAAGACGGGGAGGTTGACCACCCCATCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR GCA 90 bp GGCTTCTGGCATGGGCACTGCCTTTTCCTTAAGGTGAAGCTCAGAGAGTGGTCGGTGCTCCTCCGGGTCTaGATCTCATCAAAGTTGAAC +
Preference number: 2 (lower is better)
Translates to: GFWHGHCLFLKVKLREWSVLLRV*ISSKLN
Trigger: GTTCAACTTTGATGAGATGCAGACCCGGAGGAGCAC...CGACCACTCTCTGAGCTTCACCTTAAGGAAAAGGCAGTGCCCATGCCAGAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR GCA 90 bp TGGCTGCCAGAACATTGTCAAAGTCAAACTTGCTGTTCTCCCAGCTGCGGGGTTTCTGCCTTCAATACCTaGACCCCACCTCCCCGTTCT +
Preference number: 2 (lower is better)
Translates to: WLPEHCQSQTCCSPSCGVSAFNT*TPPPRS
Trigger: AGAACGGGGAGGTGGGGTGCAGGTATTGAAGGCAGA...AACCCCGCAGCTGGGAGAACAGCAAGTTTGACTTTGACAATGTTCTGGCAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR GCA 90 bp GATGATGGGGTGGTCAACCTCCCCGTCTTTGTACGTGATGTAGTTGCCCTTGCACTGGAACATCTGCTATaGCCTCCTGGTTGTAGCAGG +
Preference number: 2 (lower is better)
Translates to: DDGVVNLPVFVRDVVALALEHLL*PPGCSR
Trigger: CCTGCTACAACCAGGAGGGCATAGCAGATGTTCCAG...TGCAAGGGCAACTACATCACGTACAAAGACGGGGAGGTTGACCACCCCATCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR GCA 90 bp GGCTTCTGGCATGGGCACTGCCTTTTCCTTAAGGTGAAGCTCAGAGAGTGGTCGGGAAGGGTCATCTTCTaGTGGAACATCTGCTATGCC +
Preference number: 2 (lower is better)
Translates to: GFWHGHCLFLKVKLREWSGRVIF*WNICYA
Trigger: GGCATAGCAGATGTTCCAGCAGAAGATGACCCTTCC...CGACCACTCTCTGAGCTTCACCTTAAGGAAAAGGCAGTGCCCATGCCAGAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR GCA 90 bp CCTTGCATTCCGCCTCTGTCTGCTTGGAACTGTCTGAACAGGTGTACAGCTTTCTCCTCTTCTAGCTGCTaGTTCTCCCGCAGCTTCTGG +
Preference number: 2 (lower is better)
Translates to: PCIPPLSAWNCLNRCTAFSSSSC*FSRSFW
Trigger: CCAGAAGCTGCGGGAGAAGCAGCAGCTAGAAGAGGA...GAAAGCTGTACACCTGTTCAGACAGTTCCAAGCAGACAGAGGCGGAATGCAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CCA 90 bp GGCCCTTTTTGTGGCCTCTTTGCTGAATTGTTTCTAATCCTTGACAATGATATTCCGGGGCCTGCGAGCTaGGAGAGGGCAGGCGCCTTC +
Preference number: 2 (lower is better)
Translates to: GPFCGLFAELFLILDNDIPGPAS*ERAGAF
Trigger: GAAGGCGCCTGCCCTCTCCCAGCTCGCAGGCCCCGG...AATATCATTGTCAAGGATTAGAAACAATTCAGCAAAGAGGCCACAAAAAGGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR CCA 90 bp AATAGACCTTTCAGTGCTTCACCAACGGGGAATCTGTCGCCCTATTTCTTAATGCTCTCCGGGCCGGGTTaGGGTCCTCCTGGAAGTCCT +
Preference number: 2 (lower is better)
Translates to: NRPFSASPTGNLSPYFLMLSGPG*GPPGSP
Trigger: AGGACTTCCAGGAGGACCCCAACCCGGCCCGGAGAG...CATTAAGAAATAGGGCGACAGATTCCCCGTTGGTGAAGCACTGAAAGGTCTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR CCA 90 bp AGCTTCTTTCTCTCCTTCTCCTCTTCCTCCTCCTTTTGGGCAGATGTGAGGCTCCACGGAGATGCCCAGTaGGGACATGATCTTGGTCTC +
Preference number: 2 (lower is better)
Translates to: SFFLSFSSSSSFWADVRLHGDAQ*GHDLGL
Trigger: GAGACCAAGATCATGTCCCCACTGGGCATCTCCGTG...GAGCCTCACATCTGCCCAAAAGGAGGAGGAAGAGGAGAAGGAGAGAAAGAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CCA 90 bp TCATTTTCATTGGGCTGGAGGTCATCCATGTTGATCTTGGTGGCGGGTGGAGACCACGGAGATGCCCAGTaGGGACATGATCTTGGTCTC +
Preference number: 2 (lower is better)
Translates to: SFSLGWRSSMLILVAGGDHGDAQ*GHDLGL
Trigger: GAGACCAAGATCATGTCCCCACTGGGCATCTCCGTG...GTCTCCACCCGCCACCAAGATCAACATGGATGACCTCCAGCCCAATGAAAATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CCA 90 bp ATGTTGATCTTGGTGGCGGGTGGAGACTCTCCGTCAGCCGTGATGGATTTCAGCACAGTGAGGAGGGACTaGGGGAAGTTATCGAATGTG +
Preference number: 2 (lower is better)
Translates to: MLILVAGGDSPSAVMDFSTVRRD*GKLSNV
Trigger: CACATTCGATAACTTCCCCCAGTCCCTCCTCACTGT...GCTGAAATCCATCACGGCTGACGGAGAGTCTCCACCCGCCACCAAGATCAACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CCA 90 bp GGCTTCTGGCATGGGCACTGCCTTTTCCTTAAGGTGAAGCTCAGAGAGTGGTCGTCTTCCTCCTCCTTTTaGGCAGATGTGAGGCTCTCA +
Preference number: 2 (lower is better)
Translates to: GFWHGHCLFLKVKLREWSSSSSF*ADVRLS
Trigger: TGAGAGCCTCACATCTGCCCAAAAGGAGGAGGAAGA...CGACCACTCTCTGAGCTTCACCTTAAGGAAAAGGCAGTGCCCATGCCAGAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CCA 90 bp GTACAGGAAGGTGAAAAAGAGTGTACTTGCTTCTCTGGAGAAGGCAGGAAACCAGTGAAGCTCAGAGAGTaGTCGTGGGCGAGGGCCGAC +
Preference number: 2 (lower is better)
Translates to: VQEGEKECTCFSGEGRKPVKLRE*SWARAD
Trigger: GTCGGCCCTCGCCCACGACCACTCTCTGAGCTTCAC...TGGTTTCCTGCCTTCTCCAGAGAAGCAAGTACACTCTTTTTCACCTTCCTGTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR CCA 90 bp CTTATCCTCATTTTCATTGGGCTGGAGGTCATCCATGTTGATCTTGGTGGCGGGCCCTTGTCTTCCGTGTaGGAGTCGATGGAGCGGTAC +
Preference number: 2 (lower is better)
Translates to: LILIFIGLEVIHVDLGGGPLSSV*ESMERY
Trigger: GTACCGCTCCATCGACTCCCACACGGAAGACAAGGG...CCCGCCACCAAGATCAACATGGATGACCTCCAGCCCAATGAAAATGAGGATAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CCA 90 bp TGGCTGCCAGAACATTGTCAAAGTCAAACTTGCTGTTCTCCCAGCTGCGGGGTTAGTGTTTCCTGGAGTTaGCCTGGTTCAGCTCTGGGC +
Preference number: 2 (lower is better)
Translates to: WLPEHCQSQTCCSPSCGVSVSWS*PGSALG
Trigger: GCCCAGAGCTGAACCAGGCCAACTCCAGGAAACACT...AACCCCGCAGCTGGGAGAACAGCAAGTTTGACTTTGACAATGTTCTGGCAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR CCA 90 bp CCAGGGAAGGTTGTCTGTATGTCTCCCGTGCTCAGGAGGCATGATTCAGAAAGTTCATGCTGCTGTGGGTaGCGAACTGTCAGAGCTCCT +
Preference number: 2 (lower is better)
Translates to: PGKVVCMSPVLRRHDSESSCCCG*RTVRAP
Trigger: AGGAGCTCTGACAGTTCGCCACCCACAGCAGCATGA...ACTTTCTGAATCATGCCTCCTGAGCACGGGAGACATACAGACAACCTTCCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR CCA 90 bp TTATCGAATGTGCTCCTCCGGGTCTGCATCTCATCAAAGTTGAACTTTCCTCCAGACCACCTGGAGACTTaGGACTCCGGACACCAGCCG +
Preference number: 2 (lower is better)
Translates to: LSNVLLRVCISSKLNFPPDHLET*DSGHQP
Trigger: CGGCTGGTGTCCGGAGTCCCAAGTCTCCAGGTGGTC...TGGAGGAAAGTTCAACTTTGATGAGATGCAGACCCGGAGGAGCACATTCGATAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR TCA 90 bp TCTTCAGCTGCATGGGCAGGAGACATGCTGGGTGGAGAAAAGCTGGGAGAAAGTTGGTCCCAACAGAAATaGATGAAGACGCTGTTCCGG +
Preference number: 2 (lower is better)
Translates to: SSAAWAGDMLGGEKLGESWSQQK*MKTLFR
Trigger: CCGGAACAGCGTCTTCATTCATTTCTGTTGGGACCA...ACTTTCTCCCAGCTTTTCTCCACCCAGCATGTCTCCTGCCCATGCAGCTGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR TCA 90 bp GAAATGAATGTACAATGTATGTCTGATTCACACCAGGGGAAGTGGCACAGTGCCCGGATGACGGCCCAGTaGCTGAGGGCTCATCAGAAC +
Preference number: 2 (lower is better)
Translates to: EMNVQCMSDSHQGKWHSARMTAQ*LRAHQN
Trigger: GTTCTGATGAGCCCTCAGTCACTGGGCCGTCATCCG...GGCACTGTGCCACTTCCCCTGGTGTGAATCAGACATACATTGTACATTCATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR TCA 90 bp AATAGACCTTTCAGTGCTTCACCAACGGGGAATCTGTCGCCCTATTTCTTAATGTTCCCACCCCCACTGTaGGCTCCGGATGCCTCTTCC +
Preference number: 2 (lower is better)
Translates to: NRPFSASPTGNLSPYFLMFPPPL*APDASS
Trigger: GGAAGAGGCATCCGGAGCTCACAGTGGGGGTGGGAA...CATTAAGAAATAGGGCGACAGATTCCCCGTTGGTGAAGCACTGAAAGGTCTATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR TCA 90 bp GAAATGAATGTACAATGTATGTCTGATTCACACCAGGGGAAGTGGCACAGTGCCGTGCATGGGATGCCCTaGAAAGGTGGGGGTGTCCCT +
Preference number: 2 (lower is better)
Translates to: EMNVQCMSDSHQGKWHSAVHGMP*KGGGVP
Trigger: AGGGACACCCCCACCTTTTCAGGGCATCCCATGCAC...GGCACTGTGCCACTTCCCCTGGTGTGAATCAGACATACATTGTACATTCATTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR TCA 90 bp CTCATTTTCATTGGGCTGGAGGTCATCCATGTTGATCTTGGTGGCGGGTGGAGAAGCAGTCAAAGCGGTTaGAGAGGGACACGAAGTAGG +
Preference number: 2 (lower is better)
Translates to: LIFIGLEVIHVDLGGGWRSSQSG*RGTRSR
Trigger: CCTACTTCGTGTCCCTCTTCAACCGCTTTGACTGCT...TCTCCACCCGCCACCAAGATCAACATGGATGACCTCCAGCCCAATGAAAATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR TCA 90 bp ATGTTGATCTTGGTGGCGGGTGGAGACTCTCCGTCAGCCGTGATGGATTTCAGCAATCCAGGTAGCCTTTaGGATCCTCTTCTAGCTGCT +
Preference number: 2 (lower is better)
Translates to: MLILVAGGDSPSAVMDFSNPGSL*DPLLAA
Trigger: AGCAGCTAGAAGAGGATCTCAAAGGCTACCTGGATT...GCTGAAATCCATCACGGCTGACGGAGAGTCTCCACCCGCCACCAAGATCAACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR GCA 90 bp GGCCCTTTTTGTGGCCTCTTTGCTGAATTGTTTCTAATCCTTGACAATGATATTAGTGAGCCGCACCACTaGCGGCCCGACGCCCATCCC +
Preference number: 2 (lower is better)
Translates to: GPFCGLFAELFLILDNDISEPHH*RPDAHP
Trigger: GGGATGGGCGTCGGGCCGGCAGTGGTGCGGCTCACT...AATATCATTGTCAAGGATTAGAAACAATTCAGCAAAGAGGCCACAAAAAGGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR GCA 90 bp TCATTTTCATTGGGCTGGAGGTCATCCATGTTGATCTTGGTGGCGGGTGGAGACGACATTAGACTTGACTaGGGCGCGGCACTTCCTTCT +
Preference number: 2 (lower is better)
Translates to: SFSLGWRSSMLILVAGGDDIRLD*GAALPS
Trigger: AGAAGGAAGTGCCGCGCCGCAGTCAAGTCTAATGTC...GTCTCCACCCGCCACCAAGATCAACATGGATGACCTCCAGCCCAATGAAAATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR GCA 90 bp AGCTTCTTTCTCTCCTTCTCCTCTTCCTCCTCCTTTTGGGCAGATGTGAGGCTCCAGCAGGGCCTTGTTTaGCGTGTCTTGGACTTCTGT +
Preference number: 2 (lower is better)
Translates to: SFFLSFSSSSSFWADVRLQQGLV*RVLDFC
Trigger: ACAGAAGTCCAAGACACGGCAAACAAGGCCCTGCTG...GAGCCTCACATCTGCCCAAAAGGAGGAGGAAGAGGAGAAGGAGAGAAAGAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR GCA 90 bp TGGCTGCCAGAACATTGTCAAAGTCAAACTTGCTGTTCTCCCAGCTGCGGGGTTAGGATGCCACCAGGTTaGTCAAGGAGTTCCAGTACC +
Preference number: 2 (lower is better)
Translates to: WLPEHCQSQTCCSPSCGVRMPPG*SRSSST
Trigger: GGTACTGGAACTCCTTGAGCAACCTGGTGGCATCCT...AACCCCGCAGCTGGGAGAACAGCAAGTTTGACTTTGACAATGTTCTGGCAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR GCA 90 bp TGGCTGCCAGAACATTGTCAAAGTCAAACTTGCTGTTCTCCCAGCTGCGGGGTTTTTCCTCCAAAGAGCTaGATCCCCAGGAGGGAGAAG +
Preference number: 2 (lower is better)
Translates to: WLPEHCQSQTCCSPSCGVFPPKS*IPRREK
Trigger: CTTCTCCCTCCTGGGGATGCAGCTCTTTGGAGGAAA...AACCCCGCAGCTGGGAGAACAGCAAGTTTGACTTTGACAATGTTCTGGCAGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR GCA 90 bp AGGTTGGTGAAGATCGTGTCATTGACAATGCGGTGGCACTGGAGGCGAAACCTGGTGCTCCTCCGGGTCTaGATCTCATCAAAGTTGAAC +
Preference number: 2 (lower is better)
Translates to: RLVKIVSLTMRWHWRRNLVLLRV*ISSKLN
Trigger: GTTCAACTTTGATGAGATGCAGACCCGGAGGAGCAC...CAGGTTTCGCCTCCAGTGCCACCGCATTGTCAATGACACGATCTTCACCAACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR GCA 90 bp GATGATGGGGTGGTCAACCTCCCCGTCTTTGTACGTGATGTAGTTGCCCTTGCACATTCCGCCTCTGTCTaGTTGGAACTGTCTGAACAG +
Preference number: 2 (lower is better)
Translates to: DDGVVNLPVFVRDVVALAHSASV*LELSEQ
Trigger: CTGTTCAGACAGTTCCAAGCAGACAGAGGCGGAATG...TGCAAGGGCAACTACATCACGTACAAAGACGGGGAGGTTGACCACCCCATCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR GCA 90 bp GACCATGTGTGGGCACAGACACCGTGTACCCTAAGGAAGGTGTCAGGGCAACGCTCTCAAGTCTGTAACTaGATGATGCTCCTAGAACTC +
Preference number: 2 (lower is better)
Translates to: DHVWAQTPCTLRKVSGQRSQVCN*MMLLEL
Trigger: GAGTTCTAGGAGCATCATGCAGTTACAGACTTGAGA...GCGTTGCCCTGACACCTTCCTTAGGGTACACGGTGTCTGTGCCCACACATGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR GCA 90 bp CTTATCCTCATTTTCATTGGGCTGGAGGTCATCCATGTTGATCTTGGTGGCGGGTCCTCTTCTAGCTGCTaGTTCTCCCGCAGCTTCTGG +
Preference number: 2 (lower is better)
Translates to: LILIFIGLEVIHVDLGGGSSSSC*FSRSFW
Trigger: CCAGAAGCTGCGGGAGAAGCAGCAGCTAGAAGAGGA...CCCGCCACCAAGATCAACATGGATGACCTCCAGCCCAATGAAAATGAGGATAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CCA 90 bp CATAAAGAAACTCTGTTTCTAGACTGTGTTAACCGGGGAGTATTGAGTACATTTCCGGGGCCTGCGAGCTaGGAGAGGGCAGGCGCCTTC +
Preference number: 2 (lower is better)
Translates to: HKETLFLDCVNRGVLSTFPGPAS*ERAGAF
Trigger: GAAGGCGCCTGCCCTCTCCCAGCTCGCAGGCCCCGG...AAATGTACTCAATACTCCCCGGTTAACACAGTCTAGAAACAGAGTTTCTTTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR CCA 90 bp ATGTTGATCTTGGTGGCGGGTGGAGACTCTCCGTCAGCCGTGATGGATTTCAGCTTGTTTGCCGTGTCTTaGACTTCTGTGAGCCAGTTG +
Preference number: 2 (lower is better)
Translates to: MLILVAGGDSPSAVMDFSLFAVS*TSVSQL
Trigger: CAACTGGCTCACAGAAGTCCAAGACACGGCAAACAA...GCTGAAATCCATCACGGCTGACGGAGAGTCTCCACCCGCCACCAAGATCAACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CCA 90 bp TTATCGAATGTGCTCCTCCGGGTCTGCATCTCATCAAAGTTGAACTTTCCTCCAGGAGCAGGGAGGCGATaGAGCGCACAGAGTTCAGCA +
Preference number: 2 (lower is better)
Translates to: LSNVLLRVCISSKLNFPPGAGRR*SAQSSA
Trigger: TGCTGAACTCTGTGCGCTCCATCGCCTCCCTGCTCC...TGGAGGAAAGTTCAACTTTGATGAGATGCAGACCCGGAGGAGCACATTCGATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CCA 90 bp CTGGAGGTCATCCATGTTGATCTTGGTGGCGGGTGGAGACTCTCCGTCAGCCGTTATCCTCATTTTCATTaGGCTGGAGGTCATCCATGT +
Preference number: 2 (lower is better)
Translates to: LEVIHVDLGGGWRLSVSRYPHFH*AGGHPC
Trigger: ACATGGATGACCTCCAGCCCAATGAAAATGAGGATA...ACGGCTGACGGAGAGTCTCCACCCGCCACCAAGATCAACATGGATGACCTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CCA 90 bp AGCTTCTTTCTCTCCTTCTCCTCTTCCTCCTCCTTTTGGGCAGATGTGAGGCTCTCATTGACAATGCGGTaGCACTGGAGGCGAAACCTG +
Preference number: 2 (lower is better)
Translates to: SFFLSFSSSSSFWADVRLSLTMR*HWRRNL
Trigger: CAGGTTTCGCCTCCAGTGCCACCGCATTGTCAATGA...GAGCCTCACATCTGCCCAAAAGGAGGAGGAAGAGGAGAAGGAGAGAAAGAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CCA 90 bp TCTGTGTTGCCTCTGGGAAAACTACCAAAGGAGGGAGGGGAAGGCTCAGTAAGCGCATTGCCTAGGATATaGTTCCTGAAGGAGGTGTGC +
Preference number: 2 (lower is better)
Translates to: SVLPLGKLPKEGGEGSVSALPRI*FLKEVC
Trigger: GCACACCTCCTTCAGGAACCATATCCTAGGCAATGC...GCTTACTGAGCCTTCCCCTCCCTCCTTTGGTAGTTTTCCCAGAGGCAACACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR CCA 90 bp GTACAGGAAGGTGAAAAAGAGTGTACTTGCTTCTCTGGAGAAGGCAGGAAACCAGCGGTACAGCAGCTCTaGCCACCCTTCGAAGGTGGA +
Preference number: 2 (lower is better)
Translates to: VQEGEKECTCFSGEGRKPAVQQL*PPFEGG
Trigger: TCCACCTTCGAAGGGTGGCCAGAGCTGCTGTACCGC...TGGTTTCCTGCCTTCTCCAGAGAAGCAAGTACACTCTTTTTCACCTTCCTGTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR CCA 90 bp GAACAGGGCCAGCAGGGCCTTGTTTGCCGTGTCTTGGACTTCTGTGAGCCAGTTTGGAATTGGTGGCGTTaGAATCATCTTCTGGAAAGG +
Preference number: 2 (lower is better)
Translates to: EQGQQGLVCRVLDFCEPVWNWWR*NHLLER
Trigger: CCTTTCCAGAAGATGATTCCAACGCCACCAATTCCA...AACTGGCTCACAGAAGTCCAAGACACGGCAAACAAGGCCCTGCTGGCCCTGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CCA 90 bp GTCATCCATGTTGATCTTGGTGGCGGGTGGAGACTCTCCGTCAGCCGTGATGGATGGAATTGGTGGCGTTaGAATCATCTTCTGGAAAGG +
Preference number: 2 (lower is better)
Translates to: VIHVDLGGGWRLSVSRDGWNWWR*NHLLER
Trigger: CCTTTCCAGAAGATGATTCCAACGCCACCAATTCCA...TCCATCACGGCTGACGGAGAGTCTCCACCCGCCACCAAGATCAACATGGATGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CCA 90 bp TCTGCATTGCCTAGGATATGGTTCCTGAAGGAGGTGTGCTGGACCGGGTCCTCACCAGGTTGGAATTGGTaGCGTTGGAATCATCTTCTG +
Preference number: 2 (lower is better)
Translates to: SALPRIWFLKEVCWTGSSPGWNW*RWNHLL
Trigger: CAGAAGATGATTCCAACGCCACCAATTCCAACCTGG...TGAGGACCCGGTCCAGCACACCTCCTTCAGGAACCATATCCTAGGCAATGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CCA 90 bp CCTTGGCCTTCTCCCTCTCTTTGGAAAACTCTCCGCTCAACACACCGAGAACCACCACTCGTTCCAGGTTaGAATTGGTGGCGTTGGAAT +
Preference number: 2 (lower is better)
Translates to: PWPSPSLWKTLRSTHREPPLVPG*NWWRWN
Trigger: ATTCCAACGCCACCAATTCCAACCTGGAACGAGTGG...TGGTTCTCGGTGTGTTGAGCGGAGAGTTTTCCAAAGAGAGGGAGAAGGCCAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CCA 90 bp GATGATGGGGTGGTCAACCTCCCCGTCTTTGTACGTGATGTAGTTGCCCTTGCACCACTCGTTCCAGGTTaGAATTGGTGGCGTTGGAAT +
Preference number: 2 (lower is better)
Translates to: DDGVVNLPVFVRDVVALAPLVPG*NWWRWN
Trigger: ATTCCAACGCCACCAATTCCAACCTGGAACGAGTGG...TGCAAGGGCAACTACATCACGTACAAAGACGGGGAGGTTGACCACCCCATCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR TCA 90 bp GGTTCTGATGGTACTACTTCCATCCAAGGGAGTCACTCTACTGCACCCTCCTTGTGGTCCCAACAGAAATaGATGAAGACGCTGTTCCGG +
Preference number: 2 (lower is better)
Translates to: GSDGTTSIQGSHSTAPSLWSQQK*MKTLFR
Trigger: CCGGAACAGCGTCTTCATTCATTTCTGTTGGGACCA...CAAGGAGGGTGCAGTAGAGTGACTCCCTTGGATGGAAGTAGTACCATCAGAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR TCA 90 bp TCTTCAGCTGCATGGGCAGGAGACATGCTGGGTGGAGAAAAGCTGGGAGAAAGTAAGTACCAAATCAGATaGCCAGAGCAGAGTGGACAG +
Preference number: 2 (lower is better)
Translates to: SSAAWAGDMLGGEKLGESKYQIR*PEQSGQ
Trigger: CTGTCCACTCTGCTCTGGTCATCTGATTTGGTACTT...ACTTTCTCCCAGCTTTTCTCCACCCAGCATGTCTCCTGCCCATGCAGCTGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR TCA 90 bp AATAGACCTTTCAGTGCTTCACCAACGGGGAATCTGTCGCCCTATTTCTTAATGCGGATGACGGCCCAGTaGCTGAGGGCTCATCAGAAC +
Preference number: 2 (lower is better)
Translates to: NRPFSASPTGNLSPYFLMRMTAQ*LRAHQN
Trigger: GTTCTGATGAGCCCTCAGTCACTGGGCCGTCATCCG...CATTAAGAAATAGGGCGACAGATTCCCCGTTGGTGAAGCACTGAAAGGTCTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR TCA 90 bp TCTTCAGCTGCATGGGCAGGAGACATGCTGGGTGGAGAAAAGCTGGGAGAAAGTCTAGGGAGATATAAGTaGGCATTAGAGATGCCCCCA +
Preference number: 2 (lower is better)
Translates to: SSAAWAGDMLGGEKLGESLGRYK*ALEMPP
Trigger: TGGGGGCATCTCTAATGCTCACTTATATCTCCCTAG...ACTTTCTCCCAGCTTTTCTCCACCCAGCATGTCTCCTGCCCATGCAGCTGAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR TCA 90 bp GGTTCTGATGGTACTACTTCCATCCAAGGGAGTCACTCTACTGCACCCTCCTTGCTGTTGCTCAGGAGATaGACTTGGGCATGGAAAGGT +
Preference number: 2 (lower is better)
Translates to: GSDGTTSIQGSHSTAPSLLLLRR*TWAWKG
Trigger: ACCTTTCCATGCCCAAGTTCATCTCCTGAGCAACAG...CAAGGAGGGTGCAGTAGAGTGACTCCCTTGGATGGAAGTAGTACCATCAGAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR TCA 90 bp TTTGCTTCTCTTGTGACTCTACAGGAGAGACTTCTCTTTTCTCCTGGCCAATGGCTTCAAGGGGGTCCCTaGAACCTGCAGCCTCAGGTT +
Preference number: 2 (lower is better)
Translates to: FASLVTLQERLLFSPGQWLQGGP*NLQPQV
Trigger: AACCTGAGGCTGCAGGTTTCAGGGACCCCCTTGAAG...CCATTGGCCAGGAGAAAAGAGAAGTCTCTCCTGTAGAGTCACAAGAGAAGCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR TCA 90 bp GTACAGGAAGGTGAAAAAGAGTGTACTTGCTTCTCTGGAGAAGGCAGGAAACCACCACGTTTTCGGTGTTaGCGGACTCGGTCTCACTGG +
Preference number: 2 (lower is better)
Translates to: VQEGEKECTCFSGEGRKPPRFRC*RTRSHW
Trigger: CCAGTGAGACCGAGTCCGTCAACACCGAAAACGTGG...TGGTTTCCTGCCTTCTCCAGAGAAGCAAGTACACTCTTTTTCACCTTCCTGTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR TCA 90 bp AGGAAGGGCACAGATGATCCAAAGAACAGGAATTCTGACCCTGCCTCATTCAGCTGTCTTGGACTTCTGTaGGCCAGTTGGGCTGGTTGT +
Preference number: 2 (lower is better)
Translates to: RKGTDDPKNRNSDPASFSCLGLL*ASWAGC
Trigger: ACAACCAGCCCAACTGGCTCACAGAAGTCCAAGACA...GCTGAATGAGGCAGGGTCAGAATTCCTGTTCTTTGGATCATCTGTGCCCTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR TCA 90 bp TTATCGAATGTGCTCCTCCGGGTCTGCATCTCATCAAAGTTGAACTTTCCTCCATGCCCAGTGGGGACATaGTCTTGGTCTCCACCAGGA +
Preference number: 2 (lower is better)
Translates to: LSNVLLRVCISSKLNFPPCPVGT*SWSPPG
Trigger: TCCTGGTGGAGACCAAGATCATGTCCCCACTGGGCA...TGGAGGAAAGTTCAACTTTGATGAGATGCAGACCCGGAGGAGCACATTCGATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR TCA 90 bp CTCATTTTCATTGGGCTGGAGGTCATCCATGTTGATCTTGGTGGCGGGTGGAGAGCCTTTTCCTTAAGGTaGAGCTCAGAGAGTGGTCGT +
Preference number: 2 (lower is better)
Translates to: LIFIGLEVIHVDLGGGWRAFSLR*SSESGR
Trigger: ACGACCACTCTCTGAGCTTCACCTTAAGGAAAAGGC...TCTCCACCCGCCACCAAGATCAACATGGATGACCTCCAGCCCAATGAAAATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR TCA 90 bp AGGAAGGGCACAGATGATCCAAAGAACAGGAATTCTGACCCTGCCTCATTCAGCGCGACAAACACACACTaGACCACATGCTTTAGCCCC +
Preference number: 2 (lower is better)
Translates to: RKGTDDPKNRNSDPASFSATNTH*TTCFSP
Trigger: GGGGCTAAAGCATGTGGTTCAGTGTGTGTTTGTCGC...GCTGAATGAGGCAGGGTCAGAATTCCTGTTCTTTGGATCATCTGTGCCCTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR TCA 90 bp GTACAGGAAGGTGAAAAAGAGTGTACTTGCTTCTCTGGAGAAGGCAGGAAACCATGCTCCCCCTGCTCCTaGAAGGTGACGATGACGAAG +
Preference number: 2 (lower is better)
Translates to: VQEGEKECTCFSGEGRKPCSPCS*KVTMTK
Trigger: CTTCGTCATCGTCACCTTTCAGGAGCAGGGGGAGCA...TGGTTTCCTGCCTTCTCCAGAGAAGCAAGTACACTCTTTTTCACCTTCCTGTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR TCA 90 bp AGGAAGGGCACAGATGATCCAAAGAACAGGAATTCTGACCCTGCCTCATTCAGCAGCCAGGGTCAACACTaGGAGCTGAGAGTGTTTCCT +
Preference number: 2 (lower is better)
Translates to: RKGTDDPKNRNSDPASFSSQGQH*ELRVFP
Trigger: AGGAAACACTCTCAGCTCTCAGTGTTGACCCTGGCT...GCTGAATGAGGCAGGGTCAGAATTCCTGTTCTTTGGATCATCTGTGCCCTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR TCA 90 bp TGTCCTGGTGGTGAATCCCGGCCAGTGGATACCCGTGATTCTGACCCATCTACAGCTGAATGTTTTATATaGGGTTGGTCTGTGTGGCTG +
Preference number: 2 (lower is better)
Translates to: CPGGESRPVDTRDSDPSTAECFI*GWSVWL
Trigger: CAGCCACACAGACCAACCTCATATAAAACATTCAGC...TGTAGATGGGTCAGAATCACGGGTATCCACTGGCCGGGATTCACCACCAGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR GCA 90 bp GAAATGAATGTACAATGTATGTCTGATTCACACCAGGGGAAGTGGCACAGTGCCGTGGAGTGCATGGGATaGCCTGAAAAGGTGGGGGTG +
Preference number: 2 (lower is better)
Translates to: EMNVQCMSDSHQGKWHSAVECMG*PEKVGV
Trigger: CACCCCCACCTTTTCAGGGCATCCCATGCACTCCAC...GGCACTGTGCCACTTCCCCTGGTGTGAATCAGACATACATTGTACATTCATTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR GCA 90 bp AATAGACCTTTCAGTGCTTCACCAACGGGGAATCTGTCGCCCTATTTCTTAATGTGGGCTGCAGCTGGATaGATAGGTGGCCTGAGGCAG +
Preference number: 2 (lower is better)
Translates to: NRPFSASPTGNLSPYFLMWAAAG*IGGLRQ
Trigger: CTGCCTCAGGCCACCTATGCATCCAGCTGCAGCCCA...CATTAAGAAATAGGGCGACAGATTCCCCGTTGGTGAAGCACTGAAAGGTCTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR GCA 90 bp CTCATTTTCATTGGGCTGGAGGTCATCCATGTTGATCTTGGTGGCGGGTGGAGAGGAAGTTATCGAATGTaGTCCTCCGGGTCTGCATCT +
Preference number: 2 (lower is better)
Translates to: LIFIGLEVIHVDLGGGWRGSYRM*SSGSAS
Trigger: AGATGCAGACCCGGAGGAGCACATTCGATAACTTCC...TCTCCACCCGCCACCAAGATCAACATGGATGACCTCCAGCCCAATGAAAATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR GCA 90 bp GTTCTGTCCACCCCTGATGCCTGGGAATCAAAGGTCTTTCTCAGAGGCCTACCTTTCTGGCATGGGCACTaGCTTTTCCTTAAGGTGAAG +
Preference number: 2 (lower is better)
Translates to: VLSTPDAWESKVFLRGLPFWHGH*LFLKVK
Trigger: CTTCACCTTAAGGAAAAGGCAGTGCCCATGCCAGAA...AGGTAGGCCTCTGAGAAAGACCTTTGATTCCCAGGCATCAGGGGTGGACAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR GCA 90 bp TTATCGAATGTGCTCCTCCGGGTCTGCATCTCATCAAAGTTGAACTTTCCTCCATTCCTGAAGGAGGTGTaGTGGACCGGGTCCTCAGCA +
Preference number: 2 (lower is better)
Translates to: LSNVLLRVCISSKLNFPPFLKEV*WTGSSA
Trigger: TGCTGAGGACCCGGTCCAGCACACCTCCTTCAGGAA...TGGAGGAAAGTTCAACTTTGATGAGATGCAGACCCGGAGGAGCACATTCGATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR GCA 90 bp CCTTGCATTCCGCCTCTGTCTGCTTGGAACTGTCTGAACAGGTGTACAGCTTTCCATTCCGCCTCTGTCTaGTTGGAACTGTCTGAACAG +
Preference number: 2 (lower is better)
Translates to: PCIPPLSAWNCLNRCTAFHSASV*LELSEQ
Trigger: CTGTTCAGACAGTTCCAAGCAGACAGAGGCGGAATG...GAAAGCTGTACACCTGTTCAGACAGTTCCAAGCAGACAGAGGCGGAATGCAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CCA 90 bp GAAATGAATGTACAATGTATGTCTGATTCACACCAGGGGAAGTGGCACAGTGCCCACGGGCACATGGTGTaGGTGCATATACACGGGCAG +
Preference number: 2 (lower is better)
Translates to: EMNVQCMSDSHQGKWHSAHGHMV*VHIHGQ
Trigger: CTGCCCGTGTATATGCACCCACACCATGTGCCCGTG...GGCACTGTGCCACTTCCCCTGGTGTGAATCAGACATACATTGTACATTCATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR CCA 90 bp GAAATGAATGTACAATGTATGTCTGATTCACACCAGGGGAAGTGGCACAGTGCCGGACTGCGTAGTCACTaGTGTGCACGGGCACATGGT +
Preference number: 2 (lower is better)
Translates to: EMNVQCMSDSHQGKWHSAGLRSH*CARAHG
Trigger: ACCATGTGCCCGTGCACACCAGTGACTACGCAGTCC...GGCACTGTGCCACTTCCCCTGGTGTGAATCAGACATACATTGTACATTCATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR CCA 90 bp GGTTCTGATGGTACTACTTCCATCCAAGGGAGTCACTCTACTGCACCCTCCTTGAGGAGACATGCTGGGTaGAGAAAAGCTGGGAGAAAG +
Preference number: 2 (lower is better)
Translates to: GSDGTTSIQGSHSTAPSLRRHAG*RKAGRK
Trigger: CTTTCTCCCAGCTTTTCTCCACCCAGCATGTCTCCT...CAAGGAGGGTGCAGTAGAGTGACTCCCTTGGATGGAAGTAGTACCATCAGAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR CCA 90 bp CTCATTTTCATTGGGCTGGAGGTCATCCATGTTGATCTTGGTGGCGGGTGGAGAACAGTGAGGAGGGACTaGGGGAAGTTATCGAATGTG +
Preference number: 2 (lower is better)
Translates to: LIFIGLEVIHVDLGGGWRTVRRD*GKLSNV
Trigger: CACATTCGATAACTTCCCCCAGTCCCTCCTCACTGT...TCTCCACCCGCCACCAAGATCAACATGGATGACCTCCAGCCCAATGAAAATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CCA 90 bp CCAGGGAAGGTTGTCTGTATGTCTCCCGTGCTCAGGAGGCATGATTCAGAAAGTACAGTGAGGAGGGACTaGGGGAAGTTATCGAATGTG +
Preference number: 2 (lower is better)
Translates to: PGKVVCMSPVLRRHDSESTVRRD*GKLSNV
Trigger: CACATTCGATAACTTCCCCCAGTCCCTCCTCACTGT...ACTTTCTGAATCATGCCTCCTGAGCACGGGAGACATACAGACAACCTTCCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR CCA 90 bp TGGCTGCCAGAACATTGTCAAAGTCAAACTTGCTGTTCTCCCAGCTGCGGGGTTTCTTCCTCCTCCTTTTaGGCAGATGTGAGGCTCTCA +
Preference number: 2 (lower is better)
Translates to: WLPEHCQSQTCCSPSCGVSSSSF*ADVRLS
Trigger: TGAGAGCCTCACATCTGCCCAAAAGGAGGAGGAAGA...AACCCCGCAGCTGGGAGAACAGCAAGTTTGACTTTGACAATGTTCTGGCAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CCA 90 bp TCATTTTCATTGGGCTGGAGGTCATCCATGTTGATCTTGGTGGCGGGTGGAGACTCTTCCTCCTCCTTTTaGGCAGATGTGAGGCTCTCA +
Preference number: 2 (lower is better)
Translates to: SFSLGWRSSMLILVAGGDSSSSF*ADVRLS
Trigger: TGAGAGCCTCACATCTGCCCAAAAGGAGGAGGAAGA...GTCTCCACCCGCCACCAAGATCAACATGGATGACCTCCAGCCCAATGAAAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CCA 90 bp TCATTTTCATTGGGCTGGAGGTCATCCATGTTGATCTTGGTGGCGGGTGGAGACTTCTCCTGTAGTTTCTaGGTTGGGGTAGGGGCTCTT +
Preference number: 2 (lower is better)
Translates to: SFSLGWRSSMLILVAGGDFSCSF*VGVGAL
Trigger: AAGAGCCCCTACCCCAACCCAGAAACTACAGGAGAA...GTCTCCACCCGCCACCAAGATCAACATGGATGACCTCCAGCCCAATGAAAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CCA 90 bp CCTTGCATTCCGCCTCTGTCTGCTTGGAACTGTCTGAACAGGTGTACAGCTTTCACAATGCGGTGGCACTaGAGGCGAAACCTGTTGTTA +
Preference number: 2 (lower is better)
Translates to: PCIPPLSAWNCLNRCTAFTMRWH*RRNLLL
Trigger: TAACAACAGGTTTCGCCTCCAGTGCCACCGCATTGT...GAAAGCTGTACACCTGTTCAGACAGTTCCAAGCAGACAGAGGCGGAATGCAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CCA 90 bp CTTATCCTCATTTTCATTGGGCTGGAGGTCATCCATGTTGATCTTGGTGGCGGGTCATTGACAATGCGGTaGCACTGGAGGCGAAACCTG +
Preference number: 2 (lower is better)
Translates to: LILIFIGLEVIHVDLGGGSLTMR*HWRRNL
Trigger: CAGGTTTCGCCTCCAGTGCCACCGCATTGTCAATGA...CCCGCCACCAAGATCAACATGGATGACCTCCAGCCCAATGAAAATGAGGATAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CCA 90 bp GTTCTGTCCACCCCTGATGCCTGGGAATCAAAGGTCTTTCTCAGAGGCCTACCTTTGATTGCACTGGACTaGATGCCAAAGGAGATGAGG +
Preference number: 2 (lower is better)
Translates to: VLSTPDAWESKVFLRGLPLIALD*MPKEMR
Trigger: CCTCATCTCCTTTGGCATCCAGTCCAGTGCAATCAA...AGGTAGGCCTCTGAGAAAGACCTTTGATTCCCAGGCATCAGGGGTGGACAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR CCA 90 bp CTTATCCTCATTTTCATTGGGCTGGAGGTCATCCATGTTGATCTTGGTGGCGGGCACGGTAGTTGTAGATaGGGCCCTTGTCTTCCGTGT +
Preference number: 2 (lower is better)
Translates to: LILIFIGLEVIHVDLGGGHGSCR*GPCLPC
Trigger: ACACGGAAGACAAGGGCCCCATCTACAACTACCGTG...CCCGCCACCAAGATCAACATGGATGACCTCCAGCCCAATGAAAATGAGGATAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR CCA 90 bp TCTGTGTTGCCTCTGGGAAAACTACCAAAGGAGGGAGGGGAAGGCTCAGTAAGCACTTTGTACTGGTGCTaGTTCTTGGGGATGTACCTC +
Preference number: 2 (lower is better)
Translates to: SVLPLGKLPKEGGEGSVSTLYWC*FLGMYL
Trigger: GAGGTACATCCCCAAGAACCAGCACCAGTACAAAGT...GCTTACTGAGCCTTCCCCTCCCTCCTTTGGTAGTTTTCCCAGAGGCAACACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR CAA 90 bp TGCGTGTTTTGCCATGGGTTATTCTCATCCACTACCATCACAGACTaGTCCAGACATGCTCATCTCTGTTTCCCATGGCCTCACTCCCAC +
Preference number: 2 (lower is better)
Translates to: CVFCHGLFSSTTITD*SRHAHLCFPWPHSH
Trigger: GTGGGAGTGAGGCCATGGGAAACAGAGATGAGCATGTCTGGACAAGTCTGTGATGGTAGTGGATGAGAATAACCCATGGCAAAACACGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR TCA 90 bp CATAAAGAAACTCTGTTTCTAGACTGTGTTAACCGGGGAGTATTGAGTACATTTGTAGGGTCCTTTTGGTaGGGGCGCGCGGGAAGCCGG +
Preference number: 2 (lower is better)
Translates to: HKETLFLDCVNRGVLSTFVGSFW*GRAGSR
Trigger: CCGGCTTCCCGCGCGCCCTCACCAAAAGGACCCTAC...AAATGTACTCAATACTCCCCGGTTAACACAGTCTAGAAACAGAGTTTCTTTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR TCA 90 bp CTTTGCCACTTCAGGTGCTGTGGCTCAAACCTCTTAAAGTCATCCCAGGAAAAAACAAGAATCCGGAAGTaGGGATGCCCCTCCCTCCAA +
Preference number: 2 (lower is better)
Translates to: LCHFRCCGSNLLKSSQEKTRIRK*GCPSLQ
Trigger: TTGGAGGGAGGGGCATCCTCACTTCCGGATTCTTGT...TTTTTCCTGGGATGACTTTAAGAGGTTTGAGCCACAGCACCTGAAGTGGCAAAG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR TCA 90 bp CTTTGCCACTTCAGGTGCTGTGGCTCAAACCTCTTAAAGTCATCCCAGGAAAAAAAGGCTGCTCCAGAGTaGGGAAGGGATGGAGAAAGG +
Preference number: 2 (lower is better)
Translates to: LCHFRCCGSNLLKSSQEKKAAPE*GRDGER
Trigger: CCTTTCTCCATCCCTTCCTCACTCTGGAGCAGCCTT...TTTTTCCTGGGATGACTTTAAGAGGTTTGAGCCACAGCACCTGAAGTGGCAAAG
50% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR TCA 90 bp GGTTCTGATGGTACTACTTCCATCCAAGGGAGTCACTCTACTGCACCCTCCTTGTGGGTCAATTCTGGGTaGATGGTTGGGTCCTGTTTT +
Preference number: 2 (lower is better)
Translates to: GSDGTTSIQGSHSTAPSLWVNSG*MVGSCF
Trigger: AAAACAGGACCCAACCATTCACCCAGAATTGACCCA...CAAGGAGGGTGCAGTAGAGTGACTCCCTTGGATGGAAGTAGTACCATCAGAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR TCA 90 bp GAAATGAATGTACAATGTATGTCTGATTCACACCAGGGGAAGTGGCACAGTGCCCTGACTGTTTTCTCCTaGCACTTGGGGGCTGTCAGG +
Preference number: 2 (lower is better)
Translates to: EMNVQCMSDSHQGKWHSALTVFS*HLGAVR
Trigger: CCTGACAGCCCCCAAGTGTCAGGAGAAAACAGTCAG...GGCACTGTGCCACTTCCCCTGGTGTGAATCAGACATACATTGTACATTCATTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR TCA 90 bp GAAATGAATGTACAATGTATGTCTGATTCACACCAGGGGAAGTGGCACAGTGCCAAGGTCTGCTTCTCCTaGGGTTGCCCCACTGTCTTC +
Preference number: 2 (lower is better)
Translates to: EMNVQCMSDSHQGKWHSAKVCFS*GCPTVF
Trigger: GAAGACAGTGGGGCAACCTCAGGAGAAGCAGACCTT...GGCACTGTGCCACTTCCCCTGGTGTGAATCAGACATACATTGTACATTCATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR TCA 90 bp TCTGCATTGCCTAGGATATGGTTCCTGAAGGAGGTGTGCTGGACCGGGTCCTCAGCATCTCATCAAAGTTaGACTTTCCTCCAAAGAGCT +
Preference number: 2 (lower is better)
Translates to: SALPRIWFLKEVCWTGSSASHQS*TFLQRA
Trigger: AGCTCTTTGGAGGAAAGTTCAACTTTGATGAGATGC...TGAGGACCCGGTCCAGCACACCTCCTTCAGGAACCATATCCTAGGCAATGCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR TCA 90 bp ATGTTGATCTTGGTGGCGGGTGGAGACTCTCCGTCAGCCGTGATGGATTTCAGCGCATCTCATCAAAGTTaGACTTTCCTCCAAAGAGCT +
Preference number: 2 (lower is better)
Translates to: MLILVAGGDSPSAVMDFSASHQS*TFLQRA
Trigger: AGCTCTTTGGAGGAAAGTTCAACTTTGATGAGATGC...GCTGAAATCCATCACGGCTGACGGAGAGTCTCCACCCGCCACCAAGATCAACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR TCA 90 bp AGGAAGGGCACAGATGATCCAAAGAACAGGAATTCTGACCCTGCCTCATTCAGCCCCCGTCTTTGTACGTaGTGTAGTTGCCCTTGCATT +
Preference number: 2 (lower is better)
Translates to: RKGTDDPKNRNSDPASFSPRLCT*CSCPCI
Trigger: AATGCAAGGGCAACTACATCACGTACAAAGACGGGG...GCTGAATGAGGCAGGGTCAGAATTCCTGTTCTTTGGATCATCTGTGCCCTTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR TCA 90 bp CTTATCCTCATTTTCATTGGGCTGGAGGTCATCCATGTTGATCTTGGTGGCGGGCCCCGTCTTTGTACGTaGTGTAGTTGCCCTTGCATT +
Preference number: 2 (lower is better)
Translates to: LILIFIGLEVIHVDLGGGPRLCT*CSCPCI
Trigger: AATGCAAGGGCAACTACATCACGTACAAAGACGGGG...CCCGCCACCAAGATCAACATGGATGACCTCCAGCCCAATGAAAATGAGGATAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR GCA 90 bp GAAATGAATGTACAATGTATGTCTGATTCACACCAGGGGAAGTGGCACAGTGCCCACGGGCAGGACATATaGACACAGACAACCCACCAC +
Preference number: 2 (lower is better)
Translates to: EMNVQCMSDSHQGKWHSAHGQDI*TQTTHH
Trigger: GTGGTGGGTTGTCTGTGTGCATATGTCCTGCCCGTG...GGCACTGTGCCACTTCCCCTGGTGTGAATCAGACATACATTGTACATTCATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR GCA 90 bp CTTTGCCACTTCAGGTGCTGTGGCTCAAACCTCTTAAAGTCATCCCAGGAAAAAGGCACATGGTGTGGGTaGATATACACGGGCAGGACA +
Preference number: 2 (lower is better)
Translates to: LCHFRCCGSNLLKSSQEKGTWCG*IYTGRT
Trigger: TGTCCTGCCCGTGTATATGCACCCACACCATGTGCC...TTTTTCCTGGGATGACTTTAAGAGGTTTGAGCCACAGCACCTGAAGTGGCAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR GCA 90 bp TTTGCTTCTCTTGTGACTCTACAGGAGAGACTTCTCTTTTCTCCTGGCCAATGGGGCACATGGTGTGGGTaGATATACACGGGCAGGACA +
Preference number: 2 (lower is better)
Translates to: FASLVTLQERLLFSPGQWGTWCG*IYTGRT
Trigger: TGTCCTGCCCGTGTATATGCACCCACACCATGTGCC...CCATTGGCCAGGAGAAAAGAGAAGTCTCTCCTGTAGAGTCACAAGAGAAGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR GCA 90 bp AATAGACCTTTCAGTGCTTCACCAACGGGGAATCTGTCGCCCTATTTCTTAATGGGTGTGGGTATGGGCTaGAGCTGGATGCATAGGTGG +
Preference number: 2 (lower is better)
Translates to: NRPFSASPTGNLSPYFLMGVGMG*SWMHRW
Trigger: CCACCTATGCATCCAGCTGCAGCCCATACCCACACC...CATTAAGAAATAGGGCGACAGATTCCCCGTTGGTGAAGCACTGAAAGGTCTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR GCA 90 bp AGTTTAGACCACTCGCAATGGTTACTTCCTAGGAAACTGGCTTGTTCCTTGATTCGCGGCACTTCCTTCTaGAGAACCGATTCCACCGGC +
Preference number: 2 (lower is better)
Translates to: SLDHSQWLLPRKLACSLIRGTSF*RTDSTG
Trigger: GCCGGTGGAATCGGTTCTGCAGAAGGAAGTGCCGCG...AATCAAGGAACAAGCCAGTTTCCTAGGAAGTAACCATTGCGAGTGGTCTAAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR GCA 90 bp CTTATCCTCATTTTCATTGGGCTGGAGGTCATCCATGTTGATCTTGGTGGCGGGGTGCTCCTCCGGGTCTaGATCTCATCAAAGTTGAAC +
Preference number: 2 (lower is better)
Translates to: LILIFIGLEVIHVDLGGGVLLRV*ISSKLN
Trigger: GTTCAACTTTGATGAGATGCAGACCCGGAGGAGCAC...CCCGCCACCAAGATCAACATGGATGACCTCCAGCCCAATGAAAATGAGGATAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR GCA 90 bp TGGCTGCCAGAACATTGTCAAAGTCAAACTTGCTGTTCTCCCAGCTGCGGGGTTTTCTGGCATGGGCACTaGCTTTTCCTTAAGGTGAAG +
Preference number: 2 (lower is better)
Translates to: WLPEHCQSQTCCSPSCGVFWHGH*LFLKVK
Trigger: CTTCACCTTAAGGAAAAGGCAGTGCCCATGCCAGAA...AACCCCGCAGCTGGGAGAACAGCAAGTTTGACTTTGACAATGTTCTGGCAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR GCA 90 bp AGTTTAGACCACTCGCAATGGTTACTTCCTAGGAAACTGGCTTGTTCCTTGATTGGCCTCAGCTGGTCATaGTGCTGTGGGTGGCGAACT +
Preference number: 2 (lower is better)
Translates to: SLDHSQWLLPRKLACSLIGLSWS*CCGWRT
Trigger: AGTTCGCCACCCACAGCAGCATGACCAGCTGAGGCC...AATCAAGGAACAAGCCAGTTTCCTAGGAAGTAACCATTGCGAGTGGTCTAAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR CCA 90 bp TTTGCTTCTCTTGTGACTCTACAGGAGAGACTTCTCTTTTCTCCTGGCCAATGGGTGTGCACGGGCACATaGTGTGGGTGCATATACACG +
Preference number: 2 (lower is better)
Translates to: FASLVTLQERLLFSPGQWVCTGT*CGCIYT
Trigger: CGTGTATATGCACCCACACCATGTGCCCGTGCACAC...CCATTGGCCAGGAGAAAAGAGAAGTCTCTCCTGTAGAGTCACAAGAGAAGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR CCA 90 bp CTTTGCCACTTCAGGTGCTGTGGCTCAAACCTCTTAAAGTCATCCCAGGAAAAAGTGTGCACGGGCACATaGTGTGGGTGCATATACACG +
Preference number: 2 (lower is better)
Translates to: LCHFRCCGSNLLKSSQEKVCTGT*CGCIYT
Trigger: CGTGTATATGCACCCACACCATGTGCCCGTGCACAC...TTTTTCCTGGGATGACTTTAAGAGGTTTGAGCCACAGCACCTGAAGTGGCAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR CCA 90 bp GAAATGAATGTACAATGTATGTCTGATTCACACCAGGGGAAGTGGCACAGTGCCGATGCCCTGAAAAGGTaGGGGTGTCCCTGTGTAGCA +
Preference number: 2 (lower is better)
Translates to: EMNVQCMSDSHQGKWHSADALKR*GCPCVA
Trigger: TGCTACACAGGGACACCCCCACCTTTTCAGGGCATC...GGCACTGTGCCACTTCCCCTGGTGTGAATCAGACATACATTGTACATTCATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR CCA 90 bp AATAGACCTTTCAGTGCTTCACCAACGGGGAATCTGTCGCCCTATTTCTTAATGGGTATGGGCTGCAGCTaGATGCATAGGTGGCCTGAG +
Preference number: 2 (lower is better)
Translates to: NRPFSASPTGNLSPYFLMGMGCS*MHRWPE
Trigger: CTCAGGCCACCTATGCATCCAGCTGCAGCCCATACC...CATTAAGAAATAGGGCGACAGATTCCCCGTTGGTGAAGCACTGAAAGGTCTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR CCA 90 bp GGCTTCTGGCATGGGCACTGCCTTTTCCTTAAGGTGAAGCTCAGAGAGTGGTCGTATCCTCATTTTCATTaGGCTGGAGGTCATCCATGT +
Preference number: 2 (lower is better)
Translates to: GFWHGHCLFLKVKLREWSYPHFH*AGGHPC
Trigger: ACATGGATGACCTCCAGCCCAATGAAAATGAGGATA...CGACCACTCTCTGAGCTTCACCTTAAGGAAAAGGCAGTGCCCATGCCAGAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CCA 90 bp GTCATCCATGTTGATCTTGGTGGCGGGTGGAGACTCTCCGTCAGCCGTGATGGAGTTGGAATCATCTTCTaGAAAGGGAATATAGATCGC +
Preference number: 2 (lower is better)
Translates to: VIHVDLGGGWRLSVSRDGVGIIF*KGNIDR
Trigger: GCGATCTATATTCCCTTTCCAGAAGATGATTCCAAC...TCCATCACGGCTGACGGAGAGTCTCCACCCGCCACCAAGATCAACATGGATGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CCA 90 bp TGGCTGCCAGAACATTGTCAAAGTCAAACTTGCTGTTCTCCCAGCTGCGGGGTTCCAGGTTGGAATTGGTaGCGTTGGAATCATCTTCTG +
Preference number: 2 (lower is better)
Translates to: WLPEHCQSQTCCSPSCGVPGWNW*RWNHLL
Trigger: CAGAAGATGATTCCAACGCCACCAATTCCAACCTGG...AACCCCGCAGCTGGGAGAACAGCAAGTTTGACTTTGACAATGTTCTGGCAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CCA 90 bp AGGTTGGTGAAGATCGTGTCATTGACAATGCGGTGGCACTGGAGGCGAAACCTGGTTCCAGGTTGGAATTaGTGGCGTTGGAATCATCTT +
Preference number: 2 (lower is better)
Translates to: RLVKIVSLTMRWHWRRNLVPGWN*WRWNHL
Trigger: AAGATGATTCCAACGCCACCAATTCCAACCTGGAAC...CAGGTTTCGCCTCCAGTGCCACCGCATTGTCAATGACACGATCTTCACCAACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CCA 90 bp CTCGATGTCACCTCCAGCCACGTTTTCGGTGTTGACGGACTCGGTCTCACTGGTTTGCCCCATCTGCTTTaGTTGCTTGTTCTAAAATTG +
Preference number: 2 (lower is better)
Translates to: LDVTSSHVFGVDGLGLTGLPHLL*LLVLKL
Trigger: CAATTTTAGAACAAGCAACCAAAGCAGATGGGGCAA...ACCAGTGAGACCGAGTCCGTCAACACCGAAAACGTGGCTGGAGGTGACATCGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR TCA 90 bp AATAGACCTTTCAGTGCTTCACCAACGGGGAATCTGTCGCCCTATTTCTTAATGACAAGAATCCGGAAGTaGGGATGCCCCTCCCTCCAA +
Preference number: 2 (lower is better)
Translates to: NRPFSASPTGNLSPYFLMTRIRK*GCPSLQ
Trigger: TTGGAGGGAGGGGCATCCTCACTTCCGGATTCTTGT...CATTAAGAAATAGGGCGACAGATTCCCCGTTGGTGAAGCACTGAAAGGTCTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR TCA 90 bp TTTGCTTCTCTTGTGACTCTACAGGAGAGACTTCTCTTTTCTCCTGGCCAATGGAGGAGCACGCAGAGTTaGCTTTCAGATGGATCAGGG +
Preference number: 2 (lower is better)
Translates to: FASLVTLQERLLFSPGQWRSTQS*LSDGSG
Trigger: CCCTGATCCATCTGAAAGTCAACTCTGCGTGCTCCT...CCATTGGCCAGGAGAAAAGAGAAGTCTCTCCTGTAGAGTCACAAGAGAAGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR TCA 90 bp GAAATGAATGTACAATGTATGTCTGATTCACACCAGGGGAAGTGGCACAGTGCCAGGAGCACGCAGAGTTaGCTTTCAGATGGATCAGGG +
Preference number: 2 (lower is better)
Translates to: EMNVQCMSDSHQGKWHSARSTQS*LSDGSG
Trigger: CCCTGATCCATCTGAAAGTCAACTCTGCGTGCTCCT...GGCACTGTGCCACTTCCCCTGGTGTGAATCAGACATACATTGTACATTCATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR TCA 90 bp AATAGACCTTTCAGTGCTTCACCAACGGGGAATCTGTCGCCCTATTTCTTAATGAAGGCTGCTCCAGAGTaGGGAAGGGATGGAGAAAGG +
Preference number: 2 (lower is better)
Translates to: NRPFSASPTGNLSPYFLMKAAPE*GRDGER
Trigger: CCTTTCTCCATCCCTTCCTCACTCTGGAGCAGCCTT...CATTAAGAAATAGGGCGACAGATTCCCCGTTGGTGAAGCACTGAAAGGTCTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR TCA 90 bp CTTTGCCACTTCAGGTGCTGTGGCTCAAACCTCTTAAAGTCATCCCAGGAAAAAACATTAGGGCAAGCCTaGAGGAAAGGCTGCTCCAGA +
Preference number: 2 (lower is better)
Translates to: LCHFRCCGSNLLKSSQEKTLGQA*RKGCSR
Trigger: TCTGGAGCAGCCTTTCCTTCAGGCTTGCCCTAATGT...TTTTTCCTGGGATGACTTTAAGAGGTTTGAGCCACAGCACCTGAAGTGGCAAAG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR TCA 90 bp AATAGACCTTTCAGTGCTTCACCAACGGGGAATCTGTCGCCCTATTTCTTAATGCTGACTGTTTTCTCCTaGCACTTGGGGGCTGTCAGG +
Preference number: 2 (lower is better)
Translates to: NRPFSASPTGNLSPYFLMLTVFS*HLGAVR
Trigger: CCTGACAGCCCCCAAGTGTCAGGAGAAAACAGTCAG...CATTAAGAAATAGGGCGACAGATTCCCCGTTGGTGAAGCACTGAAAGGTCTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR TCA 90 bp AGTTTAGACCACTCGCAATGGTTACTTCCTAGGAAACTGGCTTGTTCCTTGATTGTAGCGGCTGAACTTTaGCTTGGAGATCCGGTGGGC +
Preference number: 2 (lower is better)
Translates to: SLDHSQWLLPRKLACSLIVAAEL*LGDPVG
Trigger: GCCCACCGGATCTCCAAGTCAAAGTTCAGCCGCTAC...AATCAAGGAACAAGCCAGTTTCCTAGGAAGTAACCATTGCGAGTGGTCTAAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR TCA 90 bp GTACAGGAAGGTGAAAAAGAGTGTACTTGCTTCTCTGGAGAAGGCAGGAAACCATGTCTTGGACTTCTGTaGGCCAGTTGGGCTGGTTGT +
Preference number: 2 (lower is better)
Translates to: VQEGEKECTCFSGEGRKPCLGLL*ASWAGC
Trigger: ACAACCAGCCCAACTGGCTCACAGAAGTCCAAGACA...TGGTTTCCTGCCTTCTCCAGAGAAGCAAGTACACTCTTTTTCACCTTCCTGTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR TCA 90 bp TTATCGAATGTGCTCCTCCGGGTCTGCATCTCATCAAAGTTGAACTTTCCTCCATGTCTTGGACTTCTGTaGGCCAGTTGGGCTGGTTGT +
Preference number: 2 (lower is better)
Translates to: LSNVLLRVCISSKLNFPPCLGLL*ASWAGC
Trigger: ACAACCAGCCCAACTGGCTCACAGAAGTCCAAGACA...TGGAGGAAAGTTCAACTTTGATGAGATGCAGACCCGGAGGAGCACATTCGATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR TCA 90 bp CCTTGGCCTTCTCCCTCTCTTTGGAAAACTCTCCGCTCAACACACCGAGAACCAGCATCTCATCAAAGTTaGACTTTCCTCCAAAGAGCT +
Preference number: 2 (lower is better)
Translates to: PWPSPSLWKTLRSTHREPASHQS*TFLQRA
Trigger: AGCTCTTTGGAGGAAAGTTCAACTTTGATGAGATGC...TGGTTCTCGGTGTGTTGAGCGGAGAGTTTTCCAAAGAGAGGGAGAAGGCCAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR TCA 90 bp AGTTTAGACCACTCGCAATGGTTACTTCCTAGGAAACTGGCTTGTTCCTTGATTTCCCCGGTCAGGATCTaGAACACAGTGAGGAGGGAC +
Preference number: 2 (lower is better)
Translates to: SLDHSQWLLPRKLACSLISPVRI*NTVRRD
Trigger: GTCCCTCCTCACTGTGTTTCAGATCCTGACCGGGGA...AATCAAGGAACAAGCCAGTTTCCTAGGAAGTAACCATTGCGAGTGGTCTAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR TCA 90 bp CTTATCCTCATTTTCATTGGGCTGGAGGTCATCCATGTTGATCTTGGTGGCGGGAGATCTTCACGACATTaGTTGCACTGGACTGGATGC +
Preference number: 2 (lower is better)
Translates to: LILIFIGLEVIHVDLGGGRSSRH*LHWTGC
Trigger: GCATCCAGTCCAGTGCAATCAATGTCGTGAAGATCT...CCCGCCACCAAGATCAACATGGATGACCTCCAGCCCAATGAAAATGAGGATAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR TCA 90 bp TTGGTCTGCCAGTCTATGAGCATAGTTTCTTCTATTAACAGGTTATGTACTAGATGGCCCTCAGGGGCCTaGGTACTCGCAGGACTCGCA +
Preference number: 2 (lower is better)
Translates to: LVCQSMSIVSSINRLCTRWPSGA*VLAGLA
Trigger: TGCGAGTCCTGCGAGTACTCAGGCCCCTGAGGGCCA...TCTAGTACATAACCTGTTAATAGAAGAAACTATGCTCATAGACTGGCAGACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR TCA 90 bp CCAGGGAAGGTTGTCTGTATGTCTCCCGTGCTCAGGAGGCATGATTCAGAAAGTTGGATATCTCCTCAATaGACATGGATTCAAAGGCCG +
Preference number: 2 (lower is better)
Translates to: PGKVVCMSPVLRRHDSESWISPQ*TWIQRP
Trigger: CGGCCTTTGAATCCATGTTCATTGAGGAGATATCCA...ACTTTCTGAATCATGCCTCCTGAGCACGGGAGACATACAGACAACCTTCCCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR GCA 90 bp AATAGACCTTTCAGTGCTTCACCAACGGGGAATCTGTCGCCCTATTTCTTAATGCACGGGCAGGACATATaGACACAGACAACCCACCAC +
Preference number: 2 (lower is better)
Translates to: NRPFSASPTGNLSPYFLMHGQDI*TQTTHH
Trigger: GTGGTGGGTTGTCTGTGTGCATATGTCCTGCCCGTG...CATTAAGAAATAGGGCGACAGATTCCCCGTTGGTGAAGCACTGAAAGGTCTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR GCA 90 bp AATAGACCTTTCAGTGCTTCACCAACGGGGAATCTGTCGCCCTATTTCTTAATGCGCACAGCTTTGGGATaGTGGAGACACCTCCTGAAG +
Preference number: 2 (lower is better)
Translates to: NRPFSASPTGNLSPYFLMRTALG*WRHLLK
Trigger: CTTCAGGAGGTGTCTCCAGCATCCCAAAGCTGTGCG...CATTAAGAAATAGGGCGACAGATTCCCCGTTGGTGAAGCACTGAAAGGTCTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR GCA 90 bp AATAGACCTTTCAGTGCTTCACCAACGGGGAATCTGTCGCCCTATTTCTTAATGCTTGGGGGAACAGCATaGATTCTGGCCAGGACAGGA +
Preference number: 2 (lower is better)
Translates to: NRPFSASPTGNLSPYFLMLGGTA*ILARTG
Trigger: TCCTGTCCTGGCCAGAATGCATGCTGTTCCCCCAAG...CATTAAGAAATAGGGCGACAGATTCCCCGTTGGTGAAGCACTGAAAGGTCTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR GCA 90 bp GTACAGGAAGGTGAAAAAGAGTGTACTTGCTTCTCTGGAGAAGGCAGGAAACCACTCTTCCCCTCATTCTaGCTTCAATACCTGCACCCC +
Preference number: 2 (lower is better)
Translates to: VQEGEKECTCFSGEGRKPLFPSF*LQYLHP
Trigger: GGGGTGCAGGTATTGAAGGCAGAATGAGGGGAAGAG...TGGTTTCCTGCCTTCTCCAGAGAAGCAAGTACACTCTTTTTCACCTTCCTGTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR CCA 90 bp GTTTTTGCTTTCAAACGGCCCCAGATTCAGATCTTCCCACAGCTAAACCAGAAAGTGTGCACGGGCACATaGTGTGGGTGCATATACACG +
Preference number: 2 (lower is better)
Translates to: VFAFKRPQIQIFPQLNQKVCTGT*CGCIYT
Trigger: CGTGTATATGCACCCACACCATGTGCCCGTGCACAC...TTTCTGGTTTAGCTGTGGGAAGATCTGAATCTGGGGCCGTTTGAAAGCAAAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR CCA 90 bp TCTTCAGCTGCATGGGCAGGAGACATGCTGGGTGGAGAAAAGCTGGGAGAAAGTAGAGTAGACATCACTTaGAAGATTGTGCTGTGGTTC +
Preference number: 2 (lower is better)
Translates to: SSAAWAGDMLGGEKLGESRVDIT*KIVLWF
Trigger: GAACCACAGCACAATCTTCCAAGTGATGTCTACTCT...ACTTTCTCCCAGCTTTTCTCCACCCAGCATGTCTCCTGCCCATGCAGCTGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR CCA 90 bp AGTTTAGACCACTCGCAATGGTTACTTCCTAGGAAACTGGCTTGTTCCTTGATTTTCCTGGAGTTGGCCTaGTTCAGCTCTGGGCAGGTG +
Preference number: 2 (lower is better)
Translates to: SLDHSQWLLPRKLACSLIFLELA*FSSGQV
Trigger: CACCTGCCCAGAGCTGAACCAGGCCAACTCCAGGAA...AATCAAGGAACAAGCCAGTTTCCTAGGAAGTAACCATTGCGAGTGGTCTAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR CCA 90 bp TGGCTGCCAGAACATTGTCAAAGTCAAACTTGCTGTTCTCCCAGCTGCGGGGTTGTTCCAGGTTGGAATTaGTGGCGTTGGAATCATCTT +
Preference number: 2 (lower is better)
Translates to: WLPEHCQSQTCCSPSCGVVPGWN*WRWNHL
Trigger: AAGATGATTCCAACGCCACCAATTCCAACCTGGAAC...AACCCCGCAGCTGGGAGAACAGCAAGTTTGACTTTGACAATGTTCTGGCAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR TCA 90 bp GAAATGAATGTACAATGTATGTCTGATTCACACCAGGGGAAGTGGCACAGTGCCTGGTCCCAACAGAAATaGATGAAGACGCTGTTCCGG +
Preference number: 2 (lower is better)
Translates to: EMNVQCMSDSHQGKWHSAWSQQK*MKTLFR
Trigger: CCGGAACAGCGTCTTCATTCATTTCTGTTGGGACCA...GGCACTGTGCCACTTCCCCTGGTGTGAATCAGACATACATTGTACATTCATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR TCA 90 bp GGTTCTGATGGTACTACTTCCATCCAAGGGAGTCACTCTACTGCACCCTCCTTGAATGCAAAGAGTTACTaGTTCCCGTTTCAGAAGCAG +
Preference number: 2 (lower is better)
Translates to: GSDGTTSIQGSHSTAPSLNAKSY*FPFQKQ
Trigger: CTGCTTCTGAAACGGGAATCAGTAACTCTTTGCATT...CAAGGAGGGTGCAGTAGAGTGACTCCCTTGGATGGAAGTAGTACCATCAGAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR TCA 90 bp CATAAAGAAACTCTGTTTCTAGACTGTGTTAACCGGGGAGTATTGAGTACATTTTTCCCACCCCCACTGTaGGCTCCGGATGCCTCTTCC +
Preference number: 2 (lower is better)
Translates to: HKETLFLDCVNRGVLSTFFPPPL*APDASS
Trigger: GGAAGAGGCATCCGGAGCTCACAGTGGGGGTGGGAA...AAATGTACTCAATACTCCCCGGTTAACACAGTCTAGAAACAGAGTTTCTTTATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR TCA 90 bp GGTTCTGATGGTACTACTTCCATCCAAGGGAGTCACTCTACTGCACCCTCCTTGCTGTTGACATACATTTaGAGGACACAGCACCAAAAG +
Preference number: 2 (lower is better)
Translates to: GSDGTTSIQGSHSTAPSLLLTYI*RTQHQK
Trigger: CTTTTGGTGCTGTGTCCTTCAAATGTATGTCAACAG...CAAGGAGGGTGCAGTAGAGTGACTCCCTTGGATGGAAGTAGTACCATCAGAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR TCA 90 bp GGTTCTGATGGTACTACTTCCATCCAAGGGAGTCACTCTACTGCACCCTCCTTGTCAAGAAAGTTTGGATaGCTTGGGTGTGGATATCCA +
Preference number: 2 (lower is better)
Translates to: GSDGTTSIQGSHSTAPSLSRKFG*LGCGYP
Trigger: TGGATATCCACACCCAAGTCATCCAAACTTTCTTGA...CAAGGAGGGTGCAGTAGAGTGACTCCCTTGGATGGAAGTAGTACCATCAGAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR TCA 90 bp TTTGCTTCTCTTGTGACTCTACAGGAGAGACTTCTCTTTTCTCCTGGCCAATGGGTAGCAGCCAGTAACTaGTCTGAAGGGAGAGGACTT +
Preference number: 2 (lower is better)
Translates to: FASLVTLQERLLFSPGQWVAASN*SEGRGL
Trigger: AAGTCCTCTCCCTTCAGATCAGTTACTGGCTGCTAC...CCATTGGCCAGGAGAAAAGAGAAGTCTCTCCTGTAGAGTCACAAGAGAAGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR TCA 90 bp GAAATGAATGTACAATGTATGTCTGATTCACACCAGGGGAAGTGGCACAGTGCCGTAGCAGCCAGTAACTaGTCTGAAGGGAGAGGACTT +
Preference number: 2 (lower is better)
Translates to: EMNVQCMSDSHQGKWHSAVAASN*SEGRGL
Trigger: AAGTCCTCTCCCTTCAGATCAGTTACTGGCTGCTAC...GGCACTGTGCCACTTCCCCTGGTGTGAATCAGACATACATTGTACATTCATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR TCA 90 bp CACACAGAAATGAAGAAATTGGGAACATCCATGACCATGAAAACAATGAAAGAAGCAGCCGGACGCATCTaGGCACGGAGATGCCCAGTG +
Preference number: 2 (lower is better)
Translates to: HTEMKKLGTSMTMKTMKEAAGRI*ARRCPV
Trigger: CACTGGGCATCTCCGTGCTCAGATGCGTCCGGCTGC...TTCTTTCATTGTTTTCATGGTCATGGATGTTCCCAATTTCTTCATTTCTGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR TCA 90 bp CTCATTTTCATTGGGCTGGAGGTCATCCATGTTGATCTTGGTGGCGGGTGGAGAGCATCTCATCAAAGTTaGACTTTCCTCCAAAGAGCT +
Preference number: 2 (lower is better)
Translates to: LIFIGLEVIHVDLGGGWRASHQS*TFLQRA
Trigger: AGCTCTTTGGAGGAAAGTTCAACTTTGATGAGATGC...TCTCCACCCGCCACCAAGATCAACATGGATGACCTCCAGCCCAATGAAAATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR TCA 90 bp TTATCGAATGTGCTCCTCCGGGTCTGCATCTCATCAAAGTTGAACTTTCCTCCAGCCTTTTCCTTAAGGTaGAGCTCAGAGAGTGGTCGT +
Preference number: 2 (lower is better)
Translates to: LSNVLLRVCISSKLNFPPAFSLR*SSESGR
Trigger: ACGACCACTCTCTGAGCTTCACCTTAAGGAAAAGGC...TGGAGGAAAGTTCAACTTTGATGAGATGCAGACCCGGAGGAGCACATTCGATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR TCA 90 bp AGTTTAGACCACTCGCAATGGTTACTTCCTAGGAAACTGGCTTGTTCCTTGATTTGTACAGCTTTCCCTTaGAGAGCTGGACCCCGATGC +
Preference number: 2 (lower is better)
Translates to: SLDHSQWLLPRKLACSLICTAFP*RAGPRC
Trigger: GCATCGGGGTCCAGCTCTTCAAGGGAAAGCTGTACA...AATCAAGGAACAAGCCAGTTTCCTAGGAAGTAACCATTGCGAGTGGTCTAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR GCA 90 bp TCTTCAGCTGCATGGGCAGGAGACATGCTGGGTGGAGAAAAGCTGGGAGAAAGTTCACTTGGAAGATTGTaGTGTGGTTCATTGATGTCA +
Preference number: 2 (lower is better)
Translates to: SSAAWAGDMLGGEKLGESSLGRL*CGSLMS
Trigger: TGACATCAATGAACCACAGCACAATCTTCCAAGTGA...ACTTTCTCCCAGCTTTTCTCCACCCAGCATGTCTCCTGCCCATGCAGCTGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR CCA 90 bp GGCCCTTTTTGTGGCCTCTTTGCTGAATTGTTTCTAATCCTTGACAATGATATTCAGCTACCTCTTCCATaGGGGATGCGGATGACGGCC +
Preference number: 2 (lower is better)
Translates to: GPFCGLFAELFLILDNDIQLPLP*GMRMTA
Trigger: GGCCGTCATCCGCATCCCCCATGGAAGAGGTAGCTG...AATATCATTGTCAAGGATTAGAAACAATTCAGCAAAGAGGCCACAAAAAGGGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR CCA 90 bp TTTGCTTCTCTTGTGACTCTACAGGAGAGACTTCTCTTTTCTCCTGGCCAATGGGAAAATTCCGTGTGGTaGAAGGGAAGGGAAAGCCAG +
Preference number: 2 (lower is better)
Translates to: FASLVTLQERLLFSPGQWENSVW*KGRESQ
Trigger: CTGGCTTTCCCTTCCCTTCCACCACACGGAATTTTC...CCATTGGCCAGGAGAAAAGAGAAGTCTCTCCTGTAGAGTCACAAGAGAAGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR CCA 90 bp TTTGCTTCTCTTGTGACTCTACAGGAGAGACTTCTCTTTTCTCCTGGCCAATGGCCCTGCTGTCCTTGTTaGGTAGAGCAACAAGAATCC +
Preference number: 2 (lower is better)
Translates to: FASLVTLQERLLFSPGQWPCCPC*VEQQES
Trigger: GGATTCTTGTTGCTCTACCCAACAAGGACAGCAGGG...CCATTGGCCAGGAGAAAAGAGAAGTCTCTCCTGTAGAGTCACAAGAGAAGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR CCA 90 bp GGTTCTGATGGTACTACTTCCATCCAAGGGAGTCACTCTACTGCACCCTCCTTGGAGTTGACTTTCAGATaGATCAGGGTTTCACCAGTT +
Preference number: 2 (lower is better)
Translates to: GSDGTTSIQGSHSTAPSLELTFR*IRVSPV
Trigger: AACTGGTGAAACCCTGATCCATCTGAAAGTCAACTC...CAAGGAGGGTGCAGTAGAGTGACTCCCTTGGATGGAAGTAGTACCATCAGAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR CCA 90 bp TCTTCAGCTGCATGGGCAGGAGACATGCTGGGTGGAGAAAAGCTGGGAGAAAGTGGAATCAAGAAAGTTTaGATGACTTGGGTGTGGATA +
Preference number: 2 (lower is better)
Translates to: SSAAWAGDMLGGEKLGESGIKKV*MTWVWI
Trigger: TATCCACACCCAAGTCATCCAAACTTTCTTGATTCC...ACTTTCTCCCAGCTTTTCTCCACCCAGCATGTCTCCTGCCCATGCAGCTGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR CCA 90 bp TTTGCTTCTCTTGTGACTCTACAGGAGAGACTTCTCTTTTCTCCTGGCCAATGGAGGAGACATGCTGGGTaGAGAAAAGCTGGGAGAAAG +
Preference number: 2 (lower is better)
Translates to: FASLVTLQERLLFSPGQWRRHAG*RKAGRK
Trigger: CTTTCTCCCAGCTTTTCTCCACCCAGCATGTCTCCT...CCATTGGCCAGGAGAAAAGAGAAGTCTCTCCTGTAGAGTCACAAGAGAAGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR CCA 90 bp TTATCGAATGTGCTCCTCCGGGTCTGCATCTCATCAAAGTTGAACTTTCCTCCATCTTCCTCCTCCTTTTaGGCAGATGTGAGGCTCTCA +
Preference number: 2 (lower is better)
Translates to: LSNVLLRVCISSKLNFPPSSSSF*ADVRLS
Trigger: TGAGAGCCTCACATCTGCCCAAAAGGAGGAGGAAGA...TGGAGGAAAGTTCAACTTTGATGAGATGCAGACCCGGAGGAGCACATTCGATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CCA 90 bp AGTTTAGACCACTCGCAATGGTTACTTCCTAGGAAACTGGCTTGTTCCTTGATTGTTTCTTCTCTGGGCTaGCAGTCCTGGCCAGCTTCT +
Preference number: 2 (lower is better)
Translates to: SLDHSQWLLPRKLACSLIVSSLG*QSWPAS
Trigger: AGAAGCTGGCCAGGACTGCCAGCCCAGAGAAGAAAC...AATCAAGGAACAAGCCAGTTTCCTAGGAAGTAACCATTGCGAGTGGTCTAAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR CCA 90 bp AGCTTCTTTCTCTCCTTCTCCTCTTCCTCCTCCTTTTGGGCAGATGTGAGGCTCTCATTTTCATTGGGCTaGAGGTCATCCATGTTGATC +
Preference number: 2 (lower is better)
Translates to: SFFLSFSSSSSFWADVRLSFSLG*RSSMLI
Trigger: GATCAACATGGATGACCTCCAGCCCAATGAAAATGA...GAGCCTCACATCTGCCCAAAAGGAGGAGGAAGAGGAGAAGGAGAGAAAGAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CCA 90 bp CTCATTTTCATTGGGCTGGAGGTCATCCATGTTGATCTTGGTGGCGGGTGGAGATATCCTCATTTTCATTaGGCTGGAGGTCATCCATGT +
Preference number: 2 (lower is better)
Translates to: LIFIGLEVIHVDLGGGWRYPHFH*AGGHPC
Trigger: ACATGGATGACCTCCAGCCCAATGAAAATGAGGATA...TCTCCACCCGCCACCAAGATCAACATGGATGACCTCCAGCCCAATGAAAATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CCA 90 bp AGTTTAGACCACTCGCAATGGTTACTTCCTAGGAAACTGGCTTGTTCCTTGATTAAACGCGCTGGCTTCTaGCATGGGCACTGCCTTTTC +
Preference number: 2 (lower is better)
Translates to: SLDHSQWLLPRKLACSLIKRAGF*HGHCLF
Trigger: GAAAAGGCAGTGCCCATGCCAGAAGCCAGCGCGTTT...AATCAAGGAACAAGCCAGTTTCCTAGGAAGTAACCATTGCGAGTGGTCTAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR CCA 90 bp TTATCGAATGTGCTCCTCCGGGTCTGCATCTCATCAAAGTTGAACTTTCCTCCAACAATGCGGTGGCACTaGAGGCGAAACCTGTTGTTA +
Preference number: 2 (lower is better)
Translates to: LSNVLLRVCISSKLNFPPTMRWH*RRNLLL
Trigger: TAACAACAGGTTTCGCCTCCAGTGCCACCGCATTGT...TGGAGGAAAGTTCAACTTTGATGAGATGCAGACCCGGAGGAGCACATTCGATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR CAA 90 bp GGTGACTGGAAGAGTTCTCTAATACCCTACAAAGACCATGGATCTTaGCCACTTCAGGTGCTGTGGCTCAAACCTCTTAAAGTCATCCCA +
Preference number: 2 (lower is better)
Translates to: GDWKSSLIPYKDHGS*PLQVLWLKPLKVIP
Trigger: TGGGATGACTTTAAGAGGTTTGAGCCACAGCACCTGAAGTGGCAAAGATCCATGGTCTTTGTAGGGTATTAGAGAACTCTTCCAGTCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR CAA 90 bp CCAACGGGGAATCTGTCGCCCTATTTCTTAATGAATGTGCGTGTTTaGCCATGGGTTATTCTCATCCACTACCATCACAGACTTGTCCAG +
Preference number: 2 (lower is better)
Translates to: PTGNLSPYFLMNVRV*PWVILIHYHHRLVQ
Trigger: CTGGACAAGTCTGTGATGGTAGTGGATGAGAATAACCCATGGCAAAACACGCACATTCATTAAGAAATAGGGCGACAGATTCCCCGTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR TCA 90 bp CTTTGCCACTTCAGGTGCTGTGGCTCAAACCTCTTAAAGTCATCCCAGGAAAAAAAGTACCAAATCAGATaGCCAGAGCAGAGTGGACAG +
Preference number: 2 (lower is better)
Translates to: LCHFRCCGSNLLKSSQEKKYQIR*PEQSGQ
Trigger: CTGTCCACTCTGCTCTGGTCATCTGATTTGGTACTT...TTTTTCCTGGGATGACTTTAAGAGGTTTGAGCCACAGCACCTGAAGTGGCAAAG
47% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR TCA 90 bp TTTGCTTCTCTTGTGACTCTACAGGAGAGACTTCTCTTTTCTCCTGGCCAATGGAAGTACCAAATCAGATaGCCAGAGCAGAGTGGACAG +
Preference number: 2 (lower is better)
Translates to: FASLVTLQERLLFSPGQWKYQIR*PEQSGQ
Trigger: CTGTCCACTCTGCTCTGGTCATCTGATTTGGTACTT...CCATTGGCCAGGAGAAAAGAGAAGTCTCTCCTGTAGAGTCACAAGAGAAGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR TCA 90 bp GAAATGAATGTACAATGTATGTCTGATTCACACCAGGGGAAGTGGCACAGTGCCAGGACTTGGCTCTGGTaGTGTAACATTTCAAGCCTC +
Preference number: 2 (lower is better)
Translates to: EMNVQCMSDSHQGKWHSARTWLW*CNISSL
Trigger: GAGGCTTGAAATGTTACATCACCAGAGCCAAGTCCT...GGCACTGTGCCACTTCCCCTGGTGTGAATCAGACATACATTGTACATTCATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR TCA 90 bp AGTTTAGACCACTCGCAATGGTTACTTCCTAGGAAACTGGCTTGTTCCTTGATTAGCAGTCAAAGCGGTTaGAGAGGGACACGAAGTAGG +
Preference number: 2 (lower is better)
Translates to: SLDHSQWLLPRKLACSLISSQSG*RGTRSR
Trigger: CCTACTTCGTGTCCCTCTTCAACCGCTTTGACTGCT...AATCAAGGAACAAGCCAGTTTCCTAGGAAGTAACCATTGCGAGTGGTCTAAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR TCA 90 bp AGTTTAGACCACTCGCAATGGTTACTTCCTAGGAAACTGGCTTGTTCCTTGATTGCAGGTCCAGGATGTTaGAGTAGTTCCGGCAGAAAG +
Preference number: 2 (lower is better)
Translates to: SLDHSQWLLPRKLACSLIAGPGC*SSSGRK
Trigger: CTTTCTGCCGGAACTACTTCAACATCCTGGACCTGC...AATCAAGGAACAAGCCAGTTTCCTAGGAAGTAACCATTGCGAGTGGTCTAAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR TCA 90 bp AGTTTAGACCACTCGCAATGGTTACTTCCTAGGAAACTGGCTTGTTCCTTGATTTGTTCATGGCGATTTTaGACAGGCAGCTCTGGCCGT +
Preference number: 2 (lower is better)
Translates to: SLDHSQWLLPRKLACSLICSWRF*TGSSGR
Trigger: ACGGCCAGAGCTGCCTGTTCAAAATCGCCATGAACA...AATCAAGGAACAAGCCAGTTTCCTAGGAAGTAACCATTGCGAGTGGTCTAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR GCA 90 bp TCTTCAGCTGCATGGGCAGGAGACATGCTGGGTGGAGAAAAGCTGGGAGAAAGTCTCGTACAGAATATGTaGAAATGGTTTCTACAAGCA +
Preference number: 2 (lower is better)
Translates to: SSAAWAGDMLGGEKLGESLVQNM*KWFLQA
Trigger: TGCTTGTAGAAACCATTTGCACATATTCTGTACGAG...ACTTTCTCCCAGCTTTTCTCCACCCAGCATGTCTCCTGCCCATGCAGCTGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR GCA 90 bp GAAATGAATGTACAATGTATGTCTGATTCACACCAGGGGAAGTGGCACAGTGCCTCTAGGTGTCACTGTTaGTCAGGAGATGAACTTGGG +
Preference number: 2 (lower is better)
Translates to: EMNVQCMSDSHQGKWHSASRCHC*SGDELG
Trigger: CCCAAGTTCATCTCCTGAGCAACAGTGACACCTAGA...GGCACTGTGCCACTTCCCCTGGTGTGAATCAGACATACATTGTACATTCATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR GCA 90 bp AATAGACCTTTCAGTGCTTCACCAACGGGGAATCTGTCGCCCTATTTCTTAATGTGTCTGTGTATACAGTaGTCACCCTTGCAGGAGCAG +
Preference number: 2 (lower is better)
Translates to: NRPFSASPTGNLSPYFLMCLCIQ*SPLQEQ
Trigger: CTGCTCCTGCAAGGGTGAGCACTGTATACACAGACA...CATTAAGAAATAGGGCGACAGATTCCCCGTTGGTGAAGCACTGAAAGGTCTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR GCA 90 bp TTTGCTTCTCTTGTGACTCTACAGGAGAGACTTCTCTTTTCTCCTGGCCAATGGCTTTGCCACTTCAGGTaGTGTGGCTCAAACCTCTTA +
Preference number: 2 (lower is better)
Translates to: FASLVTLQERLLFSPGQWLCHFR*CGSNLL
Trigger: TAAGAGGTTTGAGCCACAGCACCTGAAGTGGCAAAG...CCATTGGCCAGGAGAAAAGAGAAGTCTCTCCTGTAGAGTCACAAGAGAAGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR GCA 90 bp AGTTTAGACCACTCGCAATGGTTACTTCCTAGGAAACTGGCTTGTTCCTTGATTGCAGGCTCTCCAGACTaGCTCAGACATCGTCAGAAA +
Preference number: 2 (lower is better)
Translates to: SLDHSQWLLPRKLACSLIAGSPD*LRHRQK
Trigger: TTTCTGACGATGTCTGAGGCAGTCTGGAGAGCCTGC...AATCAAGGAACAAGCCAGTTTCCTAGGAAGTAACCATTGCGAGTGGTCTAAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR CCA 90 bp GGCCCTTTTTGTGGCCTCTTTGCTGAATTGTTTCTAATCCTTGACAATGATATTGGACTGCGTAGTCACTaGTGTGCACGGGCACATGGT +
Preference number: 2 (lower is better)
Translates to: GPFCGLFAELFLILDNDIGLRSH*CARAHG
Trigger: ACCATGTGCCCGTGCACACCAGTGACTACGCAGTCC...AATATCATTGTCAAGGATTAGAAACAATTCAGCAAAGAGGCCACAAAAAGGGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR CCA 90 bp AATAGACCTTTCAGTGCTTCACCAACGGGGAATCTGTCGCCCTATTTCTTAATGCCCTGCTGTCCTTGTTaGGTAGAGCAACAAGAATCC +
Preference number: 2 (lower is better)
Translates to: NRPFSASPTGNLSPYFLMPCCPC*VEQQES
Trigger: GGATTCTTGTTGCTCTACCCAACAAGGACAGCAGGG...CATTAAGAAATAGGGCGACAGATTCCCCGTTGGTGAAGCACTGAAAGGTCTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR CCA 90 bp AATAGACCTTTCAGTGCTTCACCAACGGGGAATCTGTCGCCCTATTTCTTAATGTTAGATCCTGAGAAGTaGAGTGCATGGGATGCCCTG +
Preference number: 2 (lower is better)
Translates to: NRPFSASPTGNLSPYFLMLDPEK*SAWDAL
Trigger: CAGGGCATCCCATGCACTCCACTTCTCAGGATCTAA...CATTAAGAAATAGGGCGACAGATTCCCCGTTGGTGAAGCACTGAAAGGTCTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR CCA 90 bp TTATCGAATGTGCTCCTCCGGGTCTGCATCTCATCAAAGTTGAACTTTCCTCCATTGTTTGCCGTGTCTTaGACTTCTGTGAGCCAGTTG +
Preference number: 2 (lower is better)
Translates to: LSNVLLRVCISSKLNFPPLFAVS*TSVSQL
Trigger: CAACTGGCTCACAGAAGTCCAAGACACGGCAAACAA...TGGAGGAAAGTTCAACTTTGATGAGATGCAGACCCGGAGGAGCACATTCGATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CCA 90 bp AGTTTAGACCACTCGCAATGGTTACTTCCTAGGAAACTGGCTTGTTCCTTGATTAACTGTCAGAGCTCCTaGGCTGCAGGGCTTGGAATA +
Preference number: 2 (lower is better)
Translates to: SLDHSQWLLPRKLACSLINCQSS*AAGLGI
Trigger: TATTCCAAGCCCTGCAGCCCAGGAGCTCTGACAGTT...AATCAAGGAACAAGCCAGTTTCCTAGGAAGTAACCATTGCGAGTGGTCTAAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR CCA 90 bp TGGCTGCCAGAACATTGTCAAAGTCAAACTTGCTGTTCTCCCAGCTGCGGGGTTTTGCCCCATCTGCTTTaGTTGCTTGTTCTAAAATTG +
Preference number: 2 (lower is better)
Translates to: WLPEHCQSQTCCSPSCGVLPHLL*LLVLKL
Trigger: CAATTTTAGAACAAGCAACCAAAGCAGATGGGGCAA...AACCCCGCAGCTGGGAGAACAGCAAGTTTGACTTTGACAATGTTCTGGCAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR TCA 90 bp AATAGACCTTTCAGTGCTTCACCAACGGGGAATCTGTCGCCCTATTTCTTAATGCTAGGGAGATATAAGTaGGCATTAGAGATGCCCCCA +
Preference number: 2 (lower is better)
Translates to: NRPFSASPTGNLSPYFLMLGRYK*ALEMPP
Trigger: TGGGGGCATCTCTAATGCTCACTTATATCTCCCTAG...CATTAAGAAATAGGGCGACAGATTCCCCGTTGGTGAAGCACTGAAAGGTCTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR TCA 90 bp CTTTGCCACTTCAGGTGCTGTGGCTCAAACCTCTTAAAGTCATCCCAGGAAAAATTCTCCACTTTGTCATaGATCAGTCCAGCAAGCTGT +
Preference number: 2 (lower is better)
Translates to: LCHFRCCGSNLLKSSQEKFSTLS*ISPASC
Trigger: ACAGCTTGCTGGACTGATTCATGACAAAGTGGAGAA...TTTTTCCTGGGATGACTTTAAGAGGTTTGAGCCACAGCACCTGAAGTGGCAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR TCA 90 bp TTTGCTTCTCTTGTGACTCTACAGGAGAGACTTCTCTTTTCTCCTGGCCAATGGGAGTGCTTTCAGAGGTaGCTGGAAGAGTTCTCTAAT +
Preference number: 2 (lower is better)
Translates to: FASLVTLQERLLFSPGQWECFQR*LEEFSN
Trigger: ATTAGAGAACTCTTCCAGTCACCTCTGAAAGCACTC...CCATTGGCCAGGAGAAAAGAGAAGTCTCTCCTGTAGAGTCACAAGAGAAGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR TCA 90 bp GAAATGAATGTACAATGTATGTCTGATTCACACCAGGGGAAGTGGCACAGTGCCGAGTGCTTTCAGAGGTaGCTGGAAGAGTTCTCTAAT +
Preference number: 2 (lower is better)
Translates to: EMNVQCMSDSHQGKWHSAECFQR*LEEFSN
Trigger: ATTAGAGAACTCTTCCAGTCACCTCTGAAAGCACTC...GGCACTGTGCCACTTCCCCTGGTGTGAATCAGACATACATTGTACATTCATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR TCA 90 bp TTTGCTTCTCTTGTGACTCTACAGGAGAGACTTCTCTTTTCTCCTGGCCAATGGAAATTCCTTAGATCCTaGGAAGTGGAGTGCATGGGA +
Preference number: 2 (lower is better)
Translates to: FASLVTLQERLLFSPGQWKFLRS*EVECMG
Trigger: TCCCATGCACTCCACTTCTCAGGATCTAAGGAATTT...CCATTGGCCAGGAGAAAAGAGAAGTCTCTCCTGTAGAGTCACAAGAGAAGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR TCA 90 bp TTTGCTTCTCTTGTGACTCTACAGGAGAGACTTCTCTTTTCTCCTGGCCAATGGTGTACAATGTATGTCTaGTTCACACCAGGGGAAGTG +
Preference number: 2 (lower is better)
Translates to: FASLVTLQERLLFSPGQWCTMYV*FTPGEV
Trigger: CACTTCCCCTGGTGTGAATCAGACATACATTGTACA...CCATTGGCCAGGAGAAAAGAGAAGTCTCTCCTGTAGAGTCACAAGAGAAGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR GCA 90 bp CTTTGCCACTTCAGGTGCTGTGGCTCAAACCTCTTAAAGTCATCCCAGGAAAAATCTATCACCCACATGTaGAAGACCACATCAAGTGCA +
Preference number: 2 (lower is better)
Translates to: LCHFRCCGSNLLKSSQEKSITHM*KTTSSA
Trigger: TGCACTTGATGTGGTCTTGCACATGTGGGTGATAGA...TTTTTCCTGGGATGACTTTAAGAGGTTTGAGCCACAGCACCTGAAGTGGCAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR GCA 90 bp GGCCCTTTTTGTGGCCTCTTTGCTGAATTGTTTCTAATCCTTGACAATGATATTCACGGGCAGGACATATaGACACAGACAACCCACCAC +
Preference number: 2 (lower is better)
Translates to: GPFCGLFAELFLILDNDIHGQDI*TQTTHH
Trigger: GTGGTGGGTTGTCTGTGTGCATATGTCCTGCCCGTG...AATATCATTGTCAAGGATTAGAAACAATTCAGCAAAGAGGCCACAAAAAGGGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR GCA 90 bp CTTTGCCACTTCAGGTGCTGTGGCTCAAACCTCTTAAAGTCATCCCAGGAAAAAGCTTACTTATATATGTaGCAAGAGGGGCTCAGGGAA +
Preference number: 2 (lower is better)
Translates to: LCHFRCCGSNLLKSSQEKAYLYM*QEGLRE
Trigger: TTCCCTGAGCCCCTCTTGGCACATATATAAGTAAGC...TTTTTCCTGGGATGACTTTAAGAGGTTTGAGCCACAGCACCTGAAGTGGCAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR GCA 90 bp AGTTTAGACCACTCGCAATGGTTACTTCCTAGGAAACTGGCTTGTTCCTTGATTTCTGTATGTCTCCCGTaGTCAGGAGGCATGATTCAG +
Preference number: 2 (lower is better)
Translates to: SLDHSQWLLPRKLACSLISVCLP*SGGMIQ
Trigger: CTGAATCATGCCTCCTGAGCACGGGAGACATACAGA...AATCAAGGAACAAGCCAGTTTCCTAGGAAGTAACCATTGCGAGTGGTCTAAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR CCA 90 bp CTTTGCCACTTCAGGTGCTGTGGCTCAAACCTCTTAAAGTCATCCCAGGAAAAATTAATGGGTCAATTCTaGGTGAATGGTTGGGTCCTG +
Preference number: 2 (lower is better)
Translates to: LCHFRCCGSNLLKSSQEKLMGQF*VNGWVL
Trigger: CAGGACCCAACCATTCACCCAGAATTGACCCATTAA...TTTTTCCTGGGATGACTTTAAGAGGTTTGAGCCACAGCACCTGAAGTGGCAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR CCA 90 bp GAAATGAATGTACAATGTATGTCTGATTCACACCAGGGGAAGTGGCACAGTGCCTTAATGGGTCAATTCTaGGTGAATGGTTGGGTCCTG +
Preference number: 2 (lower is better)
Translates to: EMNVQCMSDSHQGKWHSALMGQF*VNGWVL
Trigger: CAGGACCCAACCATTCACCCAGAATTGACCCATTAA...GGCACTGTGCCACTTCCCCTGGTGTGAATCAGACATACATTGTACATTCATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR CCA 90 bp GAAATGAATGTACAATGTATGTCTGATTCACACCAGGGGAAGTGGCACAGTGCCTTTAAAGAGGTCTTCTaGGAGTCAGCAGGCCCTTTT +
Preference number: 2 (lower is better)
Translates to: EMNVQCMSDSHQGKWHSAFKEVF*ESAGPF
Trigger: AAAAGGGCCTGCTGACTCCCAGAAGACCTCTTTAAA...GGCACTGTGCCACTTCCCCTGGTGTGAATCAGACATACATTGTACATTCATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR CCA 90 bp GAAATGAATGTACAATGTATGTCTGATTCACACCAGGGGAAGTGGCACAGTGCCGCTTTCAGAGGTGACTaGAAGAGTTCTCTAATACCC +
Preference number: 2 (lower is better)
Translates to: EMNVQCMSDSHQGKWHSAAFRGD*KSSLIP
Trigger: GGGTATTAGAGAACTCTTCCAGTCACCTCTGAAAGC...GGCACTGTGCCACTTCCCCTGGTGTGAATCAGACATACATTGTACATTCATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR CCA 90 bp AATAGACCTTTCAGTGCTTCACCAACGGGGAATCTGTCGCCCTATTTCTTAATGTTTTCTCCTGGCCAATaGCCAGGAGAGGTTTCTTCA +
Preference number: 2 (lower is better)
Translates to: NRPFSASPTGNLSPYFLMFSPGQ*PGEVSS
Trigger: TGAAGAAACCTCTCCTGGCCATTGGCCAGGAGAAAA...CATTAAGAAATAGGGCGACAGATTCCCCGTTGGTGAAGCACTGAAAGGTCTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR CCA 90 bp AGTTTAGACCACTCGCAATGGTTACTTCCTAGGAAACTGGCTTGTTCCTTGATTTTCTCCTGTAGTTTCTaGGTTGGGGTAGGGGCTCTT +
Preference number: 2 (lower is better)
Translates to: SLDHSQWLLPRKLACSLIFSCSF*VGVGAL
Trigger: AAGAGCCCCTACCCCAACCCAGAAACTACAGGAGAA...AATCAAGGAACAAGCCAGTTTCCTAGGAAGTAACCATTGCGAGTGGTCTAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR TCA 90 bp AATAGACCTTTCAGTGCTTCACCAACGGGGAATCTGTCGCCCTATTTCTTAATGGTACATTGGCAAAAGTaGAAACAGAAAGGTGAGGGG +
Preference number: 2 (lower is better)
Translates to: NRPFSASPTGNLSPYFLMVHWQK*KQKGEG
Trigger: CCCCTCACCTTTCTGTTTTCACTTTTGCCAATGTAC...CATTAAGAAATAGGGCGACAGATTCCCCGTTGGTGAAGCACTGAAAGGTCTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR TCA 90 bp GTTTTTGCTTTCAAACGGCCCCAGATTCAGATCTTCCCACAGCTAAACCAGAAAGTACATTGGCAAAAGTaGAAACAGAAAGGTGAGGGG +
Preference number: 2 (lower is better)
Translates to: VFAFKRPQIQIFPQLNQKVHWQK*KQKGEG
Trigger: CCCCTCACCTTTCTGTTTTCACTTTTGCCAATGTAC...TTTCTGGTTTAGCTGTGGGAAGATCTGAATCTGGGGCCGTTTGAAAGCAAAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR TCA 90 bp TTTGCTTCTCTTGTGACTCTACAGGAGAGACTTCTCTTTTCTCCTGGCCAATGGAATGCAAAGAGTTACTaGTTCCCGTTTCAGAAGCAG +
Preference number: 2 (lower is better)
Translates to: FASLVTLQERLLFSPGQWNAKSY*FPFQKQ
Trigger: CTGCTTCTGAAACGGGAATCAGTAACTCTTTGCATT...CCATTGGCCAGGAGAAAAGAGAAGTCTCTCCTGTAGAGTCACAAGAGAAGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR TCA 90 bp CATAAAGAAACTCTGTTTCTAGACTGTGTTAACCGGGGAGTATTGAGTACATTTACAAGAATCCGGAAGTaGGGATGCCCCTCCCTCCAA +
Preference number: 2 (lower is better)
Translates to: HKETLFLDCVNRGVLSTFTRIRK*GCPSLQ
Trigger: TTGGAGGGAGGGGCATCCTCACTTCCGGATTCTTGT...AAATGTACTCAATACTCCCCGGTTAACACAGTCTAGAAACAGAGTTTCTTTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR TCA 90 bp TTTGCTTCTCTTGTGACTCTACAGGAGAGACTTCTCTTTTCTCCTGGCCAATGGAACTGGGAAATAGAATaGGAGACATTGCCTTGTTCC +
Preference number: 2 (lower is better)
Translates to: FASLVTLQERLLFSPGQWNWEIE*ETLPCS
Trigger: GGAACAAGGCAATGTCTCTCATTCTATTTCCCAGTT...CCATTGGCCAGGAGAAAAGAGAAGTCTCTCCTGTAGAGTCACAAGAGAAGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR TCA 90 bp AATAGACCTTTCAGTGCTTCACCAACGGGGAATCTGTCGCCCTATTTCTTAATGCCACCATCTTTTGGGTaGCTTCCAAAGTCCTCATTT +
Preference number: 2 (lower is better)
Translates to: NRPFSASPTGNLSPYFLMPPSFG*LPKSSF
Trigger: AAATGAGGACTTTGGAAGTCACCCAAAAGATGGTGG...CATTAAGAAATAGGGCGACAGATTCCCCGTTGGTGAAGCACTGAAAGGTCTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR TCA 90 bp TTGGTCTGCCAGTCTATGAGCATAGTTTCTTCTATTAACAGGTTATGTACTAGACTAGGATATGGTTCCTaGAGGAGGTGTGCTGGACCG +
Preference number: 2 (lower is better)
Translates to: LVCQSMSIVSSINRLCTRLGYGS*RRCAGP
Trigger: CGGTCCAGCACACCTCCTTCAGGAACCATATCCTAG...TCTAGTACATAACCTGTTAATAGAAGAAACTATGCTCATAGACTGGCAGACCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR TCA 90 bp TTGGTCTGCCAGTCTATGAGCATAGTTTCTTCTATTAACAGGTTATGTACTAGACGTTCTGTCCACCCCTaGTGCCTGGGAATCAAAGGT +
Preference number: 2 (lower is better)
Translates to: LVCQSMSIVSSINRLCTRRSVHP*CLGIKG
Trigger: ACCTTTGATTCCCAGGCATCAGGGGTGGACAGAACG...TCTAGTACATAACCTGTTAATAGAAGAAACTATGCTCATAGACTGGCAGACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR GCA 90 bp GTTTTTGCTTTCAAACGGCCCCAGATTCAGATCTTCCCACAGCTAAACCAGAAACAAGACCACATCAAGTaGATTGCCAGTTACCTTTCC +
Preference number: 2 (lower is better)
Translates to: VFAFKRPQIQIFPQLNQKQDHIK*IASYLS
Trigger: GGAAAGGTAACTGGCAATGCACTTGATGTGGTCTTG...TTTCTGGTTTAGCTGTGGGAAGATCTGAATCTGGGGCCGTTTGAAAGCAAAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR GCA 90 bp GTTTTTGCTTTCAAACGGCCCCAGATTCAGATCTTCCCACAGCTAAACCAGAAATCTATCACCCACATGTaGAAGACCACATCAAGTGCA +
Preference number: 2 (lower is better)
Translates to: VFAFKRPQIQIFPQLNQKSITHM*KTTSSA
Trigger: TGCACTTGATGTGGTCTTGCACATGTGGGTGATAGA...TTTCTGGTTTAGCTGTGGGAAGATCTGAATCTGGGGCCGTTTGAAAGCAAAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR GCA 90 bp AATAGACCTTTCAGTGCTTCACCAACGGGGAATCTGTCGCCCTATTTCTTAATGGCTTACTTATATATGTaGCAAGAGGGGCTCAGGGAA +
Preference number: 2 (lower is better)
Translates to: NRPFSASPTGNLSPYFLMAYLYM*QEGLRE
Trigger: TTCCCTGAGCCCCTCTTGGCACATATATAAGTAAGC...CATTAAGAAATAGGGCGACAGATTCCCCGTTGGTGAAGCACTGAAAGGTCTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR GCA 90 bp CACACAGAAATGAAGAAATTGGGAACATCCATGACCATGAAAACAATGAAAGAATTCCTGAAGGAGGTGTaGTGGACCGGGTCCTCAGCA +
Preference number: 2 (lower is better)
Translates to: HTEMKKLGTSMTMKTMKEFLKEV*WTGSSA
Trigger: TGCTGAGGACCCGGTCCAGCACACCTCCTTCAGGAA...TTCTTTCATTGTTTTCATGGTCATGGATGTTCCCAATTTCTTCATTTCTGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR GCA 90 bp AGTTTAGACCACTCGCAATGGTTACTTCCTAGGAAACTGGCTTGTTCCTTGATTTTCCAGTCTCCGTTCTaGCAGTTCTTAGCAGTGGAT +
Preference number: 2 (lower is better)
Translates to: SLDHSQWLLPRKLACSLIFQSPF*QFLAVD
Trigger: ATCCACTGCTAAGAACTGGCAGAACGGAGACTGGAA...AATCAAGGAACAAGCCAGTTTCCTAGGAAGTAACCATTGCGAGTGGTCTAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR CCA 90 bp CATAAAGAAACTCTGTTTCTAGACTGTGTTAACCGGGGAGTATTGAGTACATTTGTGTGCACGGGCACATaGTGTGGGTGCATATACACG +
Preference number: 2 (lower is better)
Translates to: HKETLFLDCVNRGVLSTFVCTGT*CGCIYT
Trigger: CGTGTATATGCACCCACACCATGTGCCCGTGCACAC...AAATGTACTCAATACTCCCCGGTTAACACAGTCTAGAAACAGAGTTTCTTTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR CCA 90 bp CTTTGCCACTTCAGGTGCTGTGGCTCAAACCTCTTAAAGTCATCCCAGGAAAAAGAGTTGACTTTCAGATaGATCAGGGTTTCACCAGTT +
Preference number: 2 (lower is better)
Translates to: LCHFRCCGSNLLKSSQEKELTFR*IRVSPV
Trigger: AACTGGTGAAACCCTGATCCATCTGAAAGTCAACTC...TTTTTCCTGGGATGACTTTAAGAGGTTTGAGCCACAGCACCTGAAGTGGCAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR CCA 90 bp TTTGCTTCTCTTGTGACTCTACAGGAGAGACTTCTCTTTTCTCCTGGCCAATGGGAGAGTGAGGCCTATTaGATTAAGAAGAAGGAAAGG +
Preference number: 2 (lower is better)
Translates to: FASLVTLQERLLFSPGQWESEAY*IKKKER
Trigger: CCTTTCCTTCTTCTTAATCCAATAGGCCTCACTCTC...CCATTGGCCAGGAGAAAAGAGAAGTCTCTCCTGTAGAGTCACAAGAGAAGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR CCA 90 bp CTTTGCCACTTCAGGTGCTGTGGCTCAAACCTCTTAAAGTCATCCCAGGAAAAAGAGAGTGAGGCCTATTaGATTAAGAAGAAGGAAAGG +
Preference number: 2 (lower is better)
Translates to: LCHFRCCGSNLLKSSQEKESEAY*IKKKER
Trigger: CCTTTCCTTCTTCTTAATCCAATAGGCCTCACTCTC...TTTTTCCTGGGATGACTTTAAGAGGTTTGAGCCACAGCACCTGAAGTGGCAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR CCA 90 bp AATAGACCTTTCAGTGCTTCACCAACGGGGAATCTGTCGCCCTATTTCTTAATGTTTAAAGAGGTCTTCTaGGAGTCAGCAGGCCCTTTT +
Preference number: 2 (lower is better)
Translates to: NRPFSASPTGNLSPYFLMFKEVF*ESAGPF
Trigger: AAAAGGGCCTGCTGACTCCCAGAAGACCTCTTTAAA...CATTAAGAAATAGGGCGACAGATTCCCCGTTGGTGAAGCACTGAAAGGTCTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR CCA 90 bp CACACAGAAATGAAGAAATTGGGAACATCCATGACCATGAAAACAATGAAAGAACTGGGCTGGCAGTCCTaGCCAGCTTCTTTCTCTCCT +
Preference number: 2 (lower is better)
Translates to: HTEMKKLGTSMTMKTMKELGWQS*PASFSP
Trigger: AGGAGAGAAAGAAGCTGGCCAGGACTGCCAGCCCAG...TTCTTTCATTGTTTTCATGGTCATGGATGTTCCCAATTTCTTCATTTCTGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR CCA 90 bp TTATCGAATGTGCTCCTCCGGGTCTGCATCTCATCAAAGTTGAACTTTCCTCCATCATTTTCATTGGGCTaGAGGTCATCCATGTTGATC +
Preference number: 2 (lower is better)
Translates to: LSNVLLRVCISSKLNFPPSFSLG*RSSMLI
Trigger: GATCAACATGGATGACCTCCAGCCCAATGAAAATGA...TGGAGGAAAGTTCAACTTTGATGAGATGCAGACCCGGAGGAGCACATTCGATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CCA 90 bp TTGGTCTGCCAGTCTATGAGCATAGTTTCTTCTATTAACAGGTTATGTACTAGAAGTGTTTCCTGGAGTTaGCCTGGTTCAGCTCTGGGC +
Preference number: 2 (lower is better)
Translates to: LVCQSMSIVSSINRLCTRSVSWS*PGSALG
Trigger: GCCCAGAGCTGAACCAGGCCAACTCCAGGAAACACT...TCTAGTACATAACCTGTTAATAGAAGAAACTATGCTCATAGACTGGCAGACCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR TCA 90 bp AATAGACCTTTCAGTGCTTCACCAACGGGGAATCTGTCGCCCTATTTCTTAATGCTGTTGACATACATTTaGAGGACACAGCACCAAAAG +
Preference number: 2 (lower is better)
Translates to: NRPFSASPTGNLSPYFLMLLTYI*RTQHQK
Trigger: CTTTTGGTGCTGTGTCCTTCAAATGTATGTCAACAG...CATTAAGAAATAGGGCGACAGATTCCCCGTTGGTGAAGCACTGAAAGGTCTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR TCA 90 bp AATAGACCTTTCAGTGCTTCACCAACGGGGAATCTGTCGCCCTATTTCTTAATGTCAAGAAAGTTTGGATaGCTTGGGTGTGGATATCCA +
Preference number: 2 (lower is better)
Translates to: NRPFSASPTGNLSPYFLMSRKFG*LGCGYP
Trigger: TGGATATCCACACCCAAGTCATCCAAACTTTCTTGA...CATTAAGAAATAGGGCGACAGATTCCCCGTTGGTGAAGCACTGAAAGGTCTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR GCA 90 bp AATAGACCTTTCAGTGCTTCACCAACGGGGAATCTGTCGCCCTATTTCTTAATGACAGTGGTTTGTTTTTaGTTTCAAACGGCCCCAGAT +
Preference number: 2 (lower is better)
Translates to: NRPFSASPTGNLSPYFLMTVVCF*FQTAPD
Trigger: ATCTGGGGCCGTTTGAAAGCAAAAACAAACCACTGT...CATTAAGAAATAGGGCGACAGATTCCCCGTTGGTGAAGCACTGAAAGGTCTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR GCA 90 bp GAAATGAATGTACAATGTATGTCTGATTCACACCAGGGGAAGTGGCACAGTGCCTCACTTGGAAGATTGTaGTGTGGTTCATTGATGTCA +
Preference number: 2 (lower is better)
Translates to: EMNVQCMSDSHQGKWHSASLGRL*CGSLMS
Trigger: TGACATCAATGAACCACAGCACAATCTTCCAAGTGA...GGCACTGTGCCACTTCCCCTGGTGTGAATCAGACATACATTGTACATTCATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR GCA 90 bp TTGGTCTGCCAGTCTATGAGCATAGTTTCTTCTATTAACAGGTTATGTACTAGAGACATTAGACTTGACTaGGGCGCGGCACTTCCTTCT +
Preference number: 2 (lower is better)
Translates to: LVCQSMSIVSSINRLCTRDIRLD*GAALPS
Trigger: AGAAGGAAGTGCCGCGCCGCAGTCAAGTCTAATGTC...TCTAGTACATAACCTGTTAATAGAAGAAACTATGCTCATAGACTGGCAGACCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR GCA 90 bp AGTTTAGACCACTCGCAATGGTTACTTCCTAGGAAACTGGCTTGTTCCTTGATTTGGAGAGGTTTGGTCTaGCAGTCTATGAGCATAGTT +
Preference number: 2 (lower is better)
Translates to: SLDHSQWLLPRKLACSLIWRGLV*QSMSIV
Trigger: AACTATGCTCATAGACTGGCAGACCAAACCTCTCCA...AATCAAGGAACAAGCCAGTTTCCTAGGAAGTAACCATTGCGAGTGGTCTAAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR CCA 90 bp TTTGCTTCTCTTGTGACTCTACAGGAGAGACTTCTCTTTTCTCCTGGCCAATGGGCTGTCATAGAGGAATaGACTGTCCCTTATTGTAAT +
Preference number: 2 (lower is better)
Translates to: FASLVTLQERLLFSPGQWAVIEE*TVPYCN
Trigger: ATTACAATAAGGGACAGTCCATTCCTCTATGACAGC...CCATTGGCCAGGAGAAAAGAGAAGTCTCTCCTGTAGAGTCACAAGAGAAGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR CCA 90 bp TTTGCTTCTCTTGTGACTCTACAGGAGAGACTTCTCTTTTCTCCTGGCCAATGGTGGATGACTTGGGTGTaGATATCCATAAAGAAACTC +
Preference number: 2 (lower is better)
Translates to: FASLVTLQERLLFSPGQWWMTWV*ISIKKL
Trigger: GAGTTTCTTTATGGATATCCACACCCAAGTCATCCA...CCATTGGCCAGGAGAAAAGAGAAGTCTCTCCTGTAGAGTCACAAGAGAAGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR CCA 90 bp GAAATGAATGTACAATGTATGTCTGATTCACACCAGGGGAAGTGGCACAGTGCCTGGATGACTTGGGTGTaGATATCCATAAAGAAACTC +
Preference number: 2 (lower is better)
Translates to: EMNVQCMSDSHQGKWHSAWMTWV*ISIKKL
Trigger: GAGTTTCTTTATGGATATCCACACCCAAGTCATCCA...GGCACTGTGCCACTTCCCCTGGTGTGAATCAGACATACATTGTACATTCATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR CCA 90 bp CTTTGCCACTTCAGGTGCTGTGGCTCAAACCTCTTAAAGTCATCCCAGGAAAAACTTCTGAATCAAAGCTaGGAAAAATTCTCCAAGGTC +
Preference number: 2 (lower is better)
Translates to: LCHFRCCGSNLLKSSQEKLLNQS*EKFSKV
Trigger: GACCTTGGAGAATTTTTCCCAGCTTTGATTCAGAAG...TTTTTCCTGGGATGACTTTAAGAGGTTTGAGCCACAGCACCTGAAGTGGCAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR CCA 90 bp TTATCGAATGTGCTCCTCCGGGTCTGCATCTCATCAAAGTTGAACTTTCCTCCAGTTGGAATCATCTTCTaGAAAGGGAATATAGATCGC +
Preference number: 2 (lower is better)
Translates to: LSNVLLRVCISSKLNFPPVGIIF*KGNIDR
Trigger: GCGATCTATATTCCCTTTCCAGAAGATGATTCCAAC...TGGAGGAAAGTTCAACTTTGATGAGATGCAGACCCGGAGGAGCACATTCGATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR TCA 90 bp AATAGACCTTTCAGTGCTTCACCAACGGGGAATCTGTCGCCCTATTTCTTAATGCGTGGGGAACTTTCATaGAAAATGCTAATTCTGACT +
Preference number: 2 (lower is better)
Translates to: NRPFSASPTGNLSPYFLMRGELS*KMLILT
Trigger: AGTCAGAATTAGCATTTTTCATGAAAGTTCCCCACG...CATTAAGAAATAGGGCGACAGATTCCCCGTTGGTGAAGCACTGAAAGGTCTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR GCA 90 bp AATAGACCTTTCAGTGCTTCACCAACGGGGAATCTGTCGCCCTATTTCTTAATGTCACTTGGAAGATTGTaGTGTGGTTCATTGATGTCA +
Preference number: 2 (lower is better)
Translates to: NRPFSASPTGNLSPYFLMSLGRL*CGSLMS
Trigger: TGACATCAATGAACCACAGCACAATCTTCCAAGTGA...CATTAAGAAATAGGGCGACAGATTCCCCGTTGGTGAAGCACTGAAAGGTCTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR CCA 90 bp GGCCCTTTTTGTGGCCTCTTTGCTGAATTGTTTCTAATCCTTGACAATGATATTAGAGAAAATTCCGTGTaGTGGAAGGGAAGGGAAAGC +
Preference number: 2 (lower is better)
Translates to: GPFCGLFAELFLILDNDIRENSV*WKGRES
Trigger: GCTTTCCCTTCCCTTCCACCACACGGAATTTTCTCT...AATATCATTGTCAAGGATTAGAAACAATTCAGCAAAGAGGCCACAAAAAGGGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR CCA 90 bp TTTGCTTCTCTTGTGACTCTACAGGAGAGACTTCTCTTTTCTCCTGGCCAATGGAAAGTTTGGATGACTTaGGTGTGGATATCCATAAAG +
Preference number: 2 (lower is better)
Translates to: FASLVTLQERLLFSPGQWKVWMT*VWISIK
Trigger: CTTTATGGATATCCACACCCAAGTCATCCAAACTTT...CCATTGGCCAGGAGAAAAGAGAAGTCTCTCCTGTAGAGTCACAAGAGAAGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR CCA 90 bp AATAGACCTTTCAGTGCTTCACCAACGGGGAATCTGTCGCCCTATTTCTTAATGTGGAAGATTGTGCTGTaGTTCATTGATGTCACTACT +
Preference number: 2 (lower is better)
Translates to: NRPFSASPTGNLSPYFLMWKIVL*FIDVTT
Trigger: AGTAGTGACATCAATGAACCACAGCACAATCTTCCA...CATTAAGAAATAGGGCGACAGATTCCCCGTTGGTGAAGCACTGAAAGGTCTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR CAA 90 bp CCCAGGCATTCTTTGAGTGACAGAAGAATCTGCATTGTAGGAATATaGTCTTATCTTTTAAGTCCCTCCAAGGTTGTTTCCCTCTTGCTA +
Preference number: 2 (lower is better)
Translates to: PRHSLSDRRICIVGI*SYLLSPSKVVSLLL
Trigger: TAGCAAGAGGGAAACAACCTTGGAGGGACTTAAAAGATAAGACAATATTCCTACAATGCAGATTCTTCTGTCACTCAAAGAATGCCTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR TCA 90 bp GGCCCTTTTTGTGGCCTCTTTGCTGAATTGTTTCTAATCCTTGACAATGATATTGTACATTGGCAAAAGTaGAAACAGAAAGGTGAGGGG +
Preference number: 2 (lower is better)
Translates to: GPFCGLFAELFLILDNDIVHWQK*KQKGEG
Trigger: CCCCTCACCTTTCTGTTTTCACTTTTGCCAATGTAC...AATATCATTGTCAAGGATTAGAAACAATTCAGCAAAGAGGCCACAAAAAGGGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR TCA 90 bp CATAAAGAAACTCTGTTTCTAGACTGTGTTAACCGGGGAGTATTGAGTACATTTCTAGGGAGATATAAGTaGGCATTAGAGATGCCCCCA +
Preference number: 2 (lower is better)
Translates to: HKETLFLDCVNRGVLSTFLGRYK*ALEMPP
Trigger: TGGGGGCATCTCTAATGCTCACTTATATCTCCCTAG...AAATGTACTCAATACTCCCCGGTTAACACAGTCTAGAAACAGAGTTTCTTTATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR TCA 90 bp CATAAAGAAACTCTGTTTCTAGACTGTGTTAACCGGGGAGTATTGAGTACATTTTGGGTCAATTCTGGGTaGATGGTTGGGTCCTGTTTT +
Preference number: 2 (lower is better)
Translates to: HKETLFLDCVNRGVLSTFWVNSG*MVGSCF
Trigger: AAAACAGGACCCAACCATTCACCCAGAATTGACCCA...AAATGTACTCAATACTCCCCGGTTAACACAGTCTAGAAACAGAGTTTCTTTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR TCA 90 bp CACACAGAAATGAAGAAATTGGGAACATCCATGACCATGAAAACAATGAAAGAAAGCAAGAATACAAGTTaGCCGGCTGATGGACCAACC +
Preference number: 2 (lower is better)
Translates to: HTEMKKLGTSMTMKTMKESKNTS*PADGPT
Trigger: GGTTGGTCCATCAGCCGGTCAACTTGTATTCTTGCT...TTCTTTCATTGTTTTCATGGTCATGGATGTTCCCAATTTCTTCATTTCTGTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR GCA 90 bp AATAGACCTTTCAGTGCTTCACCAACGGGGAATCTGTCGCCCTATTTCTTAATGCTCGTACAGAATATGTaGAAATGGTTTCTACAAGCA +
Preference number: 2 (lower is better)
Translates to: NRPFSASPTGNLSPYFLMLVQNM*KWFLQA
Trigger: TGCTTGTAGAAACCATTTGCACATATTCTGTACGAG...CATTAAGAAATAGGGCGACAGATTCCCCGTTGGTGAAGCACTGAAAGGTCTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR GCA 90 bp GGCCCTTTTTGTGGCCTCTTTGCTGAATTGTTTCTAATCCTTGACAATGATATTCAAGACCACATCAAGTaGATTGCCAGTTACCTTTCC +
Preference number: 2 (lower is better)
Translates to: GPFCGLFAELFLILDNDIQDHIK*IASYLS
Trigger: GGAAAGGTAACTGGCAATGCACTTGATGTGGTCTTG...AATATCATTGTCAAGGATTAGAAACAATTCAGCAAAGAGGCCACAAAAAGGGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR CCA 90 bp GAAATGAATGTACAATGTATGTCTGATTCACACCAGGGGAAGTGGCACAGTGCCTTCTTAGTAGAGACGTaGGGAACTTTCATGAAAAAT +
Preference number: 2 (lower is better)
Translates to: EMNVQCMSDSHQGKWHSAFLVET*GTFMKN
Trigger: ATTTTTCATGAAAGTTCCCCACGTCTCTACTAAGAA...GGCACTGTGCCACTTCCCCTGGTGTGAATCAGACATACATTGTACATTCATTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR CCA 90 bp CACACAGAAATGAAGAAATTGGGAACATCCATGACCATGAAAACAATGAAAGAATCCACCCCTGATGCCTaGGAATCAAAGGTCTTTCTC +
Preference number: 2 (lower is better)
Translates to: HTEMKKLGTSMTMKTMKESTPDA*ESKVFL
Trigger: GAGAAAGACCTTTGATTCCCAGGCATCAGGGGTGGA...TTCTTTCATTGTTTTCATGGTCATGGATGTTCCCAATTTCTTCATTTCTGTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR CAA 90 bp AGGACCTTGATGGCAGTGAAAAGGAATCAAGAAAGTTTGGATGACTaGGGTGTGGATATCCATAAAGAAACTCTGTTTCTAGACTGTGTT +
Preference number: 2 (lower is better)
Translates to: RTLMAVKRNQESLDD*GVDIHKETLFLDCV
Trigger: AACACAGTCTAGAAACAGAGTTTCTTTATGGATATCCACACCCAAGTCATCCAAACTTTCTTGATTCCTTTTCACTGCCATCAAGGTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR TCA 90 bp GGCCCTTTTTGTGGCCTCTTTGCTGAATTGTTTCTAATCCTTGACAATGATATTCTGTTGACATACATTTaGAGGACACAGCACCAAAAG +
Preference number: 2 (lower is better)
Translates to: GPFCGLFAELFLILDNDILLTYI*RTQHQK
Trigger: CTTTTGGTGCTGTGTCCTTCAAATGTATGTCAACAG...AATATCATTGTCAAGGATTAGAAACAATTCAGCAAAGAGGCCACAAAAAGGGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR GCA 90 bp GGCCCTTTTTGTGGCCTCTTTGCTGAATTGTTTCTAATCCTTGACAATGATATTACAGTGGTTTGTTTTTaGTTTCAAACGGCCCCAGAT +
Preference number: 2 (lower is better)
Translates to: GPFCGLFAELFLILDNDITVVCF*FQTAPD
Trigger: ATCTGGGGCCGTTTGAAAGCAAAAACAAACCACTGT...AATATCATTGTCAAGGATTAGAAACAATTCAGCAAAGAGGCCACAAAAAGGGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR GCA 90 bp TTGGTCTGCCAGTCTATGAGCATAGTTTCTTCTATTAACAGGTTATGTACTAGACTTCACGACATTGATTaGACTGGACTGGATGCCAAA +
Preference number: 2 (lower is better)
Translates to: LVCQSMSIVSSINRLCTRLHDID*TGLDAK
Trigger: TTTGGCATCCAGTCCAGTGCAATCAATGTCGTGAAG...TCTAGTACATAACCTGTTAATAGAAGAAACTATGCTCATAGACTGGCAGACCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR GCA 90 bp CACACAGAAATGAAGAAATTGGGAACATCCATGACCATGAAAACAATGAAAGAACAGGTGTCAATTTCATaGACTTCCCAGGGAAGGTTG +
Preference number: 2 (lower is better)
Translates to: HTEMKKLGTSMTMKTMKEQVSIS*TSQGRL
Trigger: CAACCTTCCCTGGGAAGTGCATGAAATTGACACCTG...TTCTTTCATTGTTTTCATGGTCATGGATGTTCCCAATTTCTTCATTTCTGTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR CCA 90 bp GGCCCTTTTTGTGGCCTCTTTGCTGAATTGTTTCTAATCCTTGACAATGATATTGAGTTGACTTTCAGATaGATCAGGGTTTCACCAGTT +
Preference number: 2 (lower is better)
Translates to: GPFCGLFAELFLILDNDIELTFR*IRVSPV
Trigger: AACTGGTGAAACCCTGATCCATCTGAAAGTCAACTC...AATATCATTGTCAAGGATTAGAAACAATTCAGCAAAGAGGCCACAAAAAGGGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR CCA 90 bp GGCCCTTTTTGTGGCCTCTTTGCTGAATTGTTTCTAATCCTTGACAATGATATTGAGAGTGAGGCCTATTaGATTAAGAAGAAGGAAAGG +
Preference number: 2 (lower is better)
Translates to: GPFCGLFAELFLILDNDIESEAY*IKKKER
Trigger: CCTTTCCTTCTTCTTAATCCAATAGGCCTCACTCTC...AATATCATTGTCAAGGATTAGAAACAATTCAGCAAAGAGGCCACAAAAAGGGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR CCA 90 bp CACACAGAAATGAAGAAATTGGGAACATCCATGACCATGAAAACAATGAAAGAATACCACACTTTGTACTaGTGCTGGTTCTTGGGGATG +
Preference number: 2 (lower is better)
Translates to: HTEMKKLGTSMTMKTMKEYHTLY*CWFLGM
Trigger: CATCCCCAAGAACCAGCACCAGTACAAAGTGTGGTA...TTCTTTCATTGTTTTCATGGTCATGGATGTTCCCAATTTCTTCATTTCTGTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR CAA 90 bp ATGAATTTAAGGAGTGGGATGGTTAGATTTAAGGCAGGGACTTACTaGAGTAAATTTATTTTCCATGGAGTGGTGAGGAGAACACACAGA +
Preference number: 2 (lower is better)
Translates to: MNLRSGMVRFKAGTY*SKFIFHGVVRRTHR
Trigger: TCTGTGTGTTCTCCTCACCACTCCATGGAAAATAAATTTACTCAAGTAAGTCCCTGCCTTAAATCTAACCATCCCACTCCTTAAATTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR GCA 90 bp GGCCCTTTTTGTGGCCTCTTTGCTGAATTGTTTCTAATCCTTGACAATGATATTTCACTTGGAAGATTGTaGTGTGGTTCATTGATGTCA +
Preference number: 2 (lower is better)
Translates to: GPFCGLFAELFLILDNDISLGRL*CGSLMS
Trigger: TGACATCAATGAACCACAGCACAATCTTCCAAGTGA...AATATCATTGTCAAGGATTAGAAACAATTCAGCAAAGAGGCCACAAAAAGGGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR GCA 90 bp CACACAGAAATGAAGAAATTGGGAACATCCATGACCATGAAAACAATGAAAGAAGAAAAAGAGTGTACTTaGTTCTCTGGAGAAGGCAGG +
Preference number: 2 (lower is better)
Translates to: HTEMKKLGTSMTMKTMKEEKECT*FSGEGR
Trigger: CCTGCCTTCTCCAGAGAAGCAAGTACACTCTTTTTC...TTCTTTCATTGTTTTCATGGTCATGGATGTTCCCAATTTCTTCATTTCTGTGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR CCA 90 bp GGCCCTTTTTGTGGCCTCTTTGCTGAATTGTTTCTAATCCTTGACAATGATATTGGAATCAAGAAAGTTTaGATGACTTGGGTGTGGATA +
Preference number: 2 (lower is better)
Translates to: GPFCGLFAELFLILDNDIGIKKV*MTWVWI
Trigger: TATCCACACCCAAGTCATCCAAACTTTCTTGATTCC...AATATCATTGTCAAGGATTAGAAACAATTCAGCAAAGAGGCCACAAAAAGGGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR CCA 90 bp TTGGTCTGCCAGTCTATGAGCATAGTTTCTTCTATTAACAGGTTATGTACTAGATCATTTTCATTGGGCTaGAGGTCATCCATGTTGATC +
Preference number: 2 (lower is better)
Translates to: LVCQSMSIVSSINRLCTRSFSLG*RSSMLI
Trigger: GATCAACATGGATGACCTCCAGCCCAATGAAAATGA...TCTAGTACATAACCTGTTAATAGAAGAAACTATGCTCATAGACTGGCAGACCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR CCA 90 bp CATAAAGAAACTCTGTTTCTAGACTGTGTTAACCGGGGAGTATTGAGTACATTTGCTGTCATAGAGGAATaGACTGTCCCTTATTGTAAT +
Preference number: 2 (lower is better)
Translates to: HKETLFLDCVNRGVLSTFAVIEE*TVPYCN
Trigger: ATTACAATAAGGGACAGTCCATTCCTCTATGACAGC...AAATGTACTCAATACTCCCCGGTTAACACAGTCTAGAAACAGAGTTTCTTTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR CCA 90 bp CACACAGAAATGAAGAAATTGGGAACATCCATGACCATGAAAACAATGAAAGAAGAGCAAATCCAGCCCTaGCTGAATGTTTTATATGAG +
Preference number: 2 (lower is better)
Translates to: HTEMKKLGTSMTMKTMKEEQIQP*LNVLYE
Trigger: CTCATATAAAACATTCAGCCAGGGCTGGATTTGCTC...TTCTTTCATTGTTTTCATGGTCATGGATGTTCCCAATTTCTTCATTTCTGTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR GCA 90 bp CATAAAGAAACTCTGTTTCTAGACTGTGTTAACCGGGGAGTATTGAGTACATTTAAACCGAAAAGAAACTaGAACATGCTGTCAAGAAAA +
Preference number: 2 (lower is better)
Translates to: HKETLFLDCVNRGVLSTFKPKRN*NMLSRK
Trigger: TTTTCTTGACAGCATGTTGCAGTTTCTTTTCGGTTT...AAATGTACTCAATACTCCCCGGTTAACACAGTCTAGAAACAGAGTTTCTTTATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR CAA 90 bp TGGCCGGGAGCTCGGCGTGGCCCGTGCCGGTCGGGGGATCCCGTCGCAGGTGGGCCTCTCCGGGCCGGGTaGGGGTCCTCCTGGAAGTCC +
Preference number: 3 (lower is better)
Translates to: WPGARRGPCRSGDPVAGGPLRAG*GSSWKS
Trigger: GGACTTCCAGGAGGACCCCAACCCGGCCCGGAGAGG...CCCACCTGCGACGGGATCCCCCGACCGGCACGGGCCACGCCGAGCTCCCGGCCA
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399617.5
ENST00000399634.5
ENST00000399641.6
ENST00000399655.6
ENST00000406454.7
ENST00000642375.2
ENST00000643038.2
ENST00000643528.1
ENST00000643730.1
ENST00000644235.2
ENST00000644369.2
ENST00000646280.1
ENST00000647327.2
3UTR-3UTR CAA 90 bp GGCTGGCCGGGAGCTCGGCGTGGCCCGTGCCGGTCGGGGGATCCCGTCGCAGGTCCTCTCCGGGCCGGGTaGGGGTCCTCCTGGAAGTCC +
Preference number: 3 (lower is better)
Translates to: GWPGARRGPCRSGDPVAGPLRAG*GSSWKS
Trigger: GGACTTCCAGGAGGACCCCAACCCGGCCCGGAGAGG...ACCTGCGACGGGATCCCCCGACCGGCACGGGCCACGCCGAGCTCCCGGCCAGCC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399617.5
ENST00000399634.5
ENST00000399641.6
ENST00000399655.6
ENST00000406454.7
ENST00000642375.2
ENST00000643038.2
ENST00000643528.1
ENST00000643730.1
ENST00000644235.2
ENST00000644369.2
ENST00000646280.1
ENST00000647327.2
3UTR-3UTR CAA 90 bp CGCACCACTGCCGGCCCGACGCCCATCCCCAGAGCTCCGCGCCCCTGGAGGCCTCCTCTCCGGGCCGGGTaGGGGTCCTCCTGGAAGTCC +
Preference number: 3 (lower is better)
Translates to: RTTAGPTPIPRAPRPWRPPLRAG*GSSWKS
Trigger: GGACTTCCAGGAGGACCCCAACCCGGCCCGGAGAGG...AGGCCTCCAGGGGCGCGGAGCTCTGGGGATGGGCGTCGGGCCGGCAGTGGTGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 16 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399617.5
ENST00000399634.5
ENST00000399641.6
ENST00000399655.6
ENST00000406454.7
ENST00000642375.2
ENST00000643038.2
ENST00000643528.1
ENST00000643730.1
ENST00000644235.2
ENST00000644369.2
ENST00000646280.1
ENST00000647327.2
3UTR GCA 72 bp GTCGCAGGTGGGCAGGGACGGAGTGAGCCGCACCACTaGCGGCCCGACGCCCATCCCCAGAGCTCCGCGCCC +
Preference number: 3 (lower is better)
Translates to: VAGGQGRSEPHH*RPDAHPQSSAP
Trigger: GGGCGCGGAGCTCTGGGGATGGGCGTCGGGCCGGCAGTGGTGCGGCTCACTCCGTCCCTGCCCACCTGCGAC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399617.5
ENST00000399634.5
ENST00000399641.6
ENST00000399655.6
ENST00000406454.7
ENST00000642375.2
ENST00000643038.2
ENST00000643528.1
ENST00000643730.1
ENST00000644235.2
ENST00000644369.2
ENST00000646280.1
ENST00000647327.2
3UTR-3UTR CAA 90 bp TGGCCGGGAGCTCGGCGTGGCCCGTGCCGGTCGGGGGATCCCGTCGCAGGTGGGTGCTGTAGGGTCCTTTaGGTGAGGGCGCGCGGGAAG +
Preference number: 3 (lower is better)
Translates to: WPGARRGPCRSGDPVAGGCCRVL*VRARGK
Trigger: CTTCCCGCGCGCCCTCACCAAAAGGACCCTACAGCA...CCCACCTGCGACGGGATCCCCCGACCGGCACGGGCCACGCCGAGCTCCCGGCCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 16 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399617.5
ENST00000399634.5
ENST00000399641.6
ENST00000399655.6
ENST00000406454.7
ENST00000642375.2
ENST00000643038.2
ENST00000643528.1
ENST00000643730.1
ENST00000644235.2
ENST00000644369.2
ENST00000646280.1
ENST00000647327.2
3UTR-3UTR CAA 90 bp CTGGCCGGGAGCTCGGCGTGGCCCGTGCCGGTCGGGGGATCCCGTCGCAGGTGGTGCTGTAGGGTCCTTTaGGTGAGGGCGCGCGGGAAG +
Preference number: 3 (lower is better)
Translates to: LAGSSAWPVPVGGSRRRWCCRVL*VRARGK
Trigger: CTTCCCGCGCGCCCTCACCAAAAGGACCCTACAGCA...CCACCTGCGACGGGATCCCCCGACCGGCACGGGCCACGCCGAGCTCCCGGCCAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 16 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399617.5
ENST00000399634.5
ENST00000399641.6
ENST00000399655.6
ENST00000406454.7
ENST00000642375.2
ENST00000643038.2
ENST00000643528.1
ENST00000643730.1
ENST00000644235.2
ENST00000644369.2
ENST00000646280.1
ENST00000647327.2
3UTR GCA 72 bp CGTGCTTGGGACCATCCCAGCCGGGCTTGCACACCGTaGCGTTCTGGCACTGCCGCCCGTGGCCCGTTTCCA +
Preference number: 3 (lower is better)
Translates to: RAWDHPSRACTP*RSGTAARGPFP
Trigger: TGGAAACGGGCCACGGGCGGCAGTGCCAGAACGGCACGGTGTGCAAGCCCGGCTGGGATGGTCCCAAGCACG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672721.1
ENST00000672806.1
3UTR CCA 72 bp GGACCATCCCAGCCGGGCTTGCACACCGTGCCGTTCTaGCACTGCCGCCCGTGGCCCGTTTCCAGCGCACAA +
Preference number: 3 (lower is better)
Translates to: GPSQPGLHTVPF*HCRPWPVSSAQ
Trigger: TTGTGCGCTGGAAACGGGCCACGGGCGGCAGTGCCAGAACGGCACGGTGTGCAAGCCCGGCTGGGATGGTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CAA 90 bp GACCACCTGGAGACTTGGGACTCCGGACACCAGCCGCAGGGGGCGCAGCACGCGGCCACGTTTTCGGTGTaGACGGACTCGGTCTCACTG +
Preference number: 3 (lower is better)
Translates to: DHLETWDSGHQPQGAQHAATFSV*TDSVSL
Trigger: CAGTGAGACCGAGTCCGTCAACACCGAAAACGTGGC...CGCGTGCTGCGCCCCCTGCGGCTGGTGTCCGGAGTCCCAAGTCTCCAGGTGGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CAA 90 bp GCACACCGTGCCGTTCTGGCACTGCCGCCCGTGGCCCGTTTCCAGCGCACAAGGAGGGCCAGCAGGGCCTaGTTTGCCGTGTCTTGGACT +
Preference number: 3 (lower is better)
Translates to: AHRAVLALPPVARFQRTRRASRA*FAVSWT
Trigger: AGTCCAAGACACGGCAAACAAGGCCCTGCTGGCCCT...CCTTGTGCGCTGGAAACGGGCCACGGGCGGCAGTGCCAGAACGGCACGGTGTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672721.1
ENST00000672806.1
3UTR CCA 72 bp GGCTTGCACACCGTGCCGTTCTGGCACTGCCGCCCGTaGCCCGTTTCCAGCGCACAAGGGGAAGGGTCATCT +
Preference number: 3 (lower is better)
Translates to: GLHTVPFWHCRP*PVSSAQGEGSS
Trigger: AGATGACCCTTCCCCTTGTGCGCTGGAAACGGGCCACGGGCGGCAGTGCCAGAACGGCACGGTGTGCAAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CAA 90 bp GACTGCGGCGCGGCACTTCCTTCTGCAGAACCGATTCCACCGGCGCCAGTAGCGAGGGCCAGCAGGGCCTaGTTTGCCGTGTCTTGGACT +
Preference number: 3 (lower is better)
Translates to: DCGAALPSAEPIPPAPVARASRA*FAVSWT
Trigger: AGTCCAAGACACGGCAAACAAGGCCCTGCTGGCCCT...CGCTACTGGCGCCGGTGGAATCGGTTCTGCAGAAGGAAGTGCCGCGCCGCAGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CAA 90 bp GACCACCTGGAGACTTGGGACTCCGGACACCAGCCGCAGGGGGCGCAGCACGCGTCCACTCGTTCCAGGTaGGAATTGGTGGCGTTGGAA +
Preference number: 3 (lower is better)
Translates to: DHLETWDSGHQPQGAQHASTRSR*ELVALE
Trigger: TTCCAACGCCACCAATTCCAACCTGGAACGAGTGGA...CGCGTGCTGCGCCCCCTGCGGCTGGTGTCCGGAGTCCCAAGTCTCCAGGTGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CAA 90 bp GACTGCGGCGCGGCACTTCCTTCTGCAGAACCGATTCCACCGGCGCCAGTAGCGTCCCTCCGAGAGCGTTaGCCCCATCTGCTTTGGTTG +
Preference number: 3 (lower is better)
Translates to: DCGAALPSAEPIPPAPVASLRER*PHLLWL
Trigger: CAACCAAAGCAGATGGGGCAAACGCTCTCGGAGGGA...CGCTACTGGCGCCGGTGGAATCGGTTCTGCAGAAGGAAGTGCCGCGCCGCAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CAA 90 bp GACTGCGGCGCGGCACTTCCTTCTGCAGAACCGATTCCACCGGCGCCAGTAGCGCTCTTCCTCCTCCTTTaGGGCAGATGTGAGGCTCTC +
Preference number: 3 (lower is better)
Translates to: DCGAALPSAEPIPPAPVALFLLL*GRCEAL
Trigger: GAGAGCCTCACATCTGCCCAAAAGGAGGAGGAAGAG...CGCTACTGGCGCCGGTGGAATCGGTTCTGCAGAAGGAAGTGCCGCGCCGCAGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CAA 90 bp CCGTTCTGTCCACCCCTGATGCCTGGGAATCAAAGGTCTTTCTCAGAGGCCTACCGCAGGGGCCGGGCCTaGAGGGCGTATTCCACGCAC +
Preference number: 3 (lower is better)
Translates to: PFCPPLMPGNQRSFSEAYRRGRA*RAYSTH
Trigger: GTGCGTGGAATACGCCCTCAAGGCCCGGCCCCTGCG...GTAGGCCTCTGAGAAAGACCTTTGATTCCCAGGCATCAGGGGTGGACAGAACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR CAA 90 bp GCACACCGTGCCGTTCTGGCACTGCCGCCCGTGGCCCGTTTCCAGCGCACAAGGCGTTCCAGGTTGGAATaGGTGGCGTTGGAATCATCT +
Preference number: 3 (lower is better)
Translates to: AHRAVLALPPVARFQRTRRSRLE*VALESS
Trigger: AGATGATTCCAACGCCACCAATTCCAACCTGGAACG...CCTTGTGCGCTGGAAACGGGCCACGGGCGGCAGTGCCAGAACGGCACGGTGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CAA 90 bp GGGGCCCTTGTCTTCCGTGTGGGAGTCGATGGAGCGGTACAGCAGCTCTGGCCATCCCTCCGAGAGCGTTaGCCCCATCTGCTTTGGTTG +
Preference number: 3 (lower is better)
Translates to: GALVFRVGVDGAVQQLWPSLRER*PHLLWL
Trigger: CAACCAAAGCAGATGGGGCAAACGCTCTCGGAGGGA...TGGCCAGAGCTGCTGTACCGCTCCATCGACTCCCACACGGAAGACAAGGGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CAA 90 bp TCACTGGTGGGCATGCTCATGTTTCGGGGCTTCTCCTCATCCATGCCTTCGTCCCCATCCCAGCCGGGCTaGCACACCGTGCCGTTCTGG +
Preference number: 3 (lower is better)
Translates to: SLVGMLMFRGFSSSMPSSPSQPG*HTVPFW
Trigger: CCAGAACGGCACGGTGTGCAAGCCCGGCTGGGATGG...GGACGAAGGCATGGATGAGGAGAAGCCCCGAAACATGAGCATGCCCACCAGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672721.1
ENST00000672806.1
3UTR TCA 72 bp CTACCTCTTCCATGGGGGATGCGGATGACGGCCCAGTaGCTGAGGGCTCATCAGAACGCCTCCCTGCACCTC +
Preference number: 3 (lower is better)
Translates to: LPLPWGMRMTAQ*LRAHQNASLHL
Trigger: GAGGTGCAGGGAGGCGTTCTGATGAGCCCTCAGTCACTGGGCCGTCATCCGCATCCCCCATGGAAGAGGTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR GCA 72 bp GAGTCATCCGAGACTGAGGCTCGGCTAGGCAGTGACTaGACTCCTGGCCTCAGCTGGTCATGCTGCTGTGGG +
Preference number: 3 (lower is better)
Translates to: ESSETEARLGSD*TPGLSWSCCCG
Trigger: CCCACAGCAGCATGACCAGCTGAGGCCAGGAGTGCAGTCACTGCCTAGCCGAGCCTCAGTCTCGGATGACTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR CAA 90 bp GACTGCGGCGCGGCACTTCCTTCTGCAGAACCGATTCCACCGGCGCCAGTAGCGTCATCCATGTTGATCTaGGTGGCGGGTGGAGACTCT +
Preference number: 3 (lower is better)
Translates to: DCGAALPSAEPIPPAPVASSMLI*VAGGDS
Trigger: AGAGTCTCCACCCGCCACCAAGATCAACATGGATGA...CGCTACTGGCGCCGGTGGAATCGGTTCTGCAGAAGGAAGTGCCGCGCCGCAGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CAA 90 bp TCACTGGTGGGCATGCTCATGTTTCGGGGCTTCTCCTCATCCATGCCTTCGTCCTTGGTGATGCCGTGCTaGGGACCATCCCAGCCGGGC +
Preference number: 3 (lower is better)
Translates to: SLVGMLMFRGFSSSMPSSLVMPC*GPSQPG
Trigger: GCCCGGCTGGGATGGTCCCAAGCACGGCATCACCAA...GGACGAAGGCATGGATGAGGAGAAGCCCCGAAACATGAGCATGCCCACCAGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CAA 90 bp GAACAGGGCCAGCAGGGCCTTGTTTGCCGTGTCTTGGACTTCTGTGAGCCAGTTTTGGTGATGCCGTGCTaGGGACCATCCCAGCCGGGC +
Preference number: 3 (lower is better)
Translates to: EQGQQGLVCRVLDFCEPVLVMPC*GPSQPG
Trigger: GCCCGGCTGGGATGGTCCCAAGCACGGCATCACCAA...AACTGGCTCACAGAAGTCCAAGACACGGCAAACAAGGCCCTGCTGGCCCTGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672721.1
ENST00000672806.1
3UTR TCA 72 bp TTCTGCAGAACCGATTCCACCGGCGCCAGTAGCGGCTaGACTTTGACTTGGAGATCCGGTGGGCCAGCCTGG +
Preference number: 3 (lower is better)
Translates to: FCRTDSTGASSG*TLTWRSGGPAW
Trigger: CCAGGCTGGCCCACCGGATCTCCAAGTCAAAGTTCAGCCGCTACTGGCGCCGGTGGAATCGGTTCTGCAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR GCA 72 bp AGGCCCAGGGTGGAAGGTGTGGCTCATACCAGTGTCTaGTCCTCCACCACTGAGGACAATGGGGGTGACTGG +
Preference number: 3 (lower is better)
Translates to: RPRVEGVAHTSV*SSTTEDNGGDW
Trigger: CCAGTCACCCCCATTGTCCTCAGTGGTGGAGGAGCAGACACTGGTATGAGCCACACCTTCCACCCTGGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR CCA 72 bp GGGCACTGCCTTTTCCTTAAGGTGAAGCTCAGAGAGTaGTCGTGGGCGAGGGCCGACAGGCATCTCTGGCTC +
Preference number: 3 (lower is better)
Translates to: GHCLFLKVKLRE*SWARADRHLWL
Trigger: GAGCCAGAGATGCCTGTCGGCCCTCGCCCACGACCACTCTCTGAGCTTCACCTTAAGGAAAAGGCAGTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR CCA 72 bp TGTAGATGGGGCCCTTGTCTTCCGTGTGGGAGTCGATaGAGCGGTACAGCAGCTCTGGCCACCCTTCGAAGG +
Preference number: 3 (lower is better)
Translates to: CRWGPCLPCGSR*SGTAALATLRR
Trigger: CCTTCGAAGGGTGGCCAGAGCTGCTGTACCGCTCCATCGACTCCCACACGGAAGACAAGGGCCCCATCTACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR CCA 72 bp GTCATGCTGCTGTGGGTGGCGAACTGTCAGAGCTCCTaGGCTGCAGGGCTTGGAATAGGACCATGTGTGGGC +
Preference number: 3 (lower is better)
Translates to: VMLLWVANCQSS*AAGLGIGPCVG
Trigger: GCCCACACATGGTCCTATTCCAAGCCCTGCAGCCCAGGAGCTCTGACAGTTCGCCACCCACAGCAGCATGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR CAA 90 bp GGGGCCCTTGTCTTCCGTGTGGGAGTCGATGGAGCGGTACAGCAGCTCTGGCCATCATCCATGTTGATCTaGGTGGCGGGTGGAGACTCT +
Preference number: 3 (lower is better)
Translates to: GALVFRVGVDGAVQQLWPSSMLI*VAGGDS
Trigger: AGAGTCTCCACCCGCCACCAAGATCAACATGGATGA...TGGCCAGAGCTGCTGTACCGCTCCATCGACTCCCACACGGAAGACAAGGGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CAA 90 bp GGGGCCCTTGTCTTCCGTGTGGGAGTCGATGGAGCGGTACAGCAGCTCTGGCCAGTGAAGATCGTGTCATaGACAATGCGGTGGCACTGG +
Preference number: 3 (lower is better)
Translates to: GALVFRVGVDGAVQQLWPVKIVS*TMRWHW
Trigger: CCAGTGCCACCGCATTGTCAATGACACGATCTTCAC...TGGCCAGAGCTGCTGTACCGCTCCATCGACTCCCACACGGAAGACAAGGGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CAA 90 bp GACTGCGGCGCGGCACTTCCTTCTGCAGAACCGATTCCACCGGCGCCAGTAGCGGCAAAGTTGTCAAAGTaGGTGATGCCGTGCTTGGGA +
Preference number: 3 (lower is better)
Translates to: DCGAALPSAEPIPPAPVAAKLSK*VMPCLG
Trigger: TCCCAAGCACGGCATCACCAACTTTGACAACTTTGC...CGCTACTGGCGCCGGTGGAATCGGTTCTGCAGAAGGAAGTGCCGCGCCGCAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CAA 90 bp GGGGCCCTTGTCTTCCGTGTGGGAGTCGATGGAGCGGTACAGCAGCTCTGGCCAGCCTTCTCCCTCTCTTaGGAAAACTCTCCGCTCAAC +
Preference number: 3 (lower is better)
Translates to: GALVFRVGVDGAVQQLWPAFSLS*ENSPLN
Trigger: GTTGAGCGGAGAGTTTTCCAAAGAGAGGGAGAAGGC...TGGCCAGAGCTGCTGTACCGCTCCATCGACTCCCACACGGAAGACAAGGGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672721.1
ENST00000672806.1
3UTR GCA 72 bp GCCAGGAGAGGTTTCTTCAAGGGGGTCCCTGAAACCTaGAGCCTCAGGTTCCTTGGCAAGGGAGCCACTGCT +
Preference number: 3 (lower is better)
Translates to: ARRGFFKGVPET*SLRFLGKGATA
Trigger: AGCAGTGGCTCCCTTGCCAAGGAACCTGAGGCTGCAGGTTTCAGGGACCCCCTTGAAGAAACCTCTCCTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR CCA 72 bp TGCCTTTTCCTTAAGGTGAAGCTCAGAGAGTGGTCGTaGGCGAGGGCCGACAGGCATCTCTGGCTCCTCCTC +
Preference number: 3 (lower is better)
Translates to: CLFLKVKLREWS*ARADRHLWLLL
Trigger: GAGGAGGAGCCAGAGATGCCTGTCGGCCCTCGCCCACGACCACTCTCTGAGCTTCACCTTAAGGAAAAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR CCA 72 bp AGTTGGCCTGGTTCAGCTCTGGGCAGGTGTAGGAGTTaGGGCACTGACCATCGGAGCAGGGATGGTCCTTCA +
Preference number: 3 (lower is better)
Translates to: SWPGSALGRCRS*GTDHRSRDGPS
Trigger: TGAAGGACCATCCCTGCTCCGATGGTCAGTGCCCCAACTCCTACACCTGCCCAGAGCTGAACCAGGCCAACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR CAA 90 bp GTGAGGAGGGACTGGGGGAAGTTATCGAATGTGCTCCTCCGGGTCTGCATCTCACGGCTGAACTTTGACTaGGAGATCCGGTGGGCCAGC +
Preference number: 3 (lower is better)
Translates to: VRRDWGKLSNVLLRVCISRLNFD*EIRWAS
Trigger: GCTGGCCCACCGGATCTCCAAGTCAAAGTTCAGCCG...TGAGATGCAGACCCGGAGGAGCACATTCGATAACTTCCCCCAGTCCCTCCTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CAA 90 bp TTGGTGATGCCGTGCTTGGGACCATCCCAGCCGGGCTTGCACACCGTGCCGTTCCTTGTTTGCCGTGTCTaGGACTTCTGTGAGCCAGTT +
Preference number: 3 (lower is better)
Translates to: LVMPCLGPSQPGLHTVPFLVCRV*DFCEPV
Trigger: AACTGGCTCACAGAAGTCCAAGACACGGCAAACAAG...GAACGGCACGGTGTGCAAGCCCGGCTGGGATGGTCCCAAGCACGGCATCACCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CAA 90 bp GAACAGGGCCAGCAGGGCCTTGTTTGCCGTGTCTTGGACTTCTGTGAGCCAGTTGCCACGTTTTCGGTGTaGACGGACTCGGTCTCACTG +
Preference number: 3 (lower is better)
Translates to: EQGQQGLVCRVLDFCEPVATFSV*TDSVSL
Trigger: CAGTGAGACCGAGTCCGTCAACACCGAAAACGTGGC...AACTGGCTCACAGAAGTCCAAGACACGGCAAACAAGGCCCTGCTGGCCCTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CAA 90 bp CCTGGTTCAGCTCTGGGCAGGTGTAGGAGTTGGGGCACTGACCATCGGAGCAGGCTTGTTTGCCGTGTCTaGGACTTCTGTGAGCCAGTT +
Preference number: 3 (lower is better)
Translates to: PGSALGRCRSWGTDHRSRLVCRV*DFCEPV
Trigger: AACTGGCTCACAGAAGTCCAAGACACGGCAAACAAG...CCTGCTCCGATGGTCAGTGCCCCAACTCCTACACCTGCCCAGAGCTGAACCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR CAA 90 bp CTCGATGTCACCTCCAGCCACGTTTTCGGTGTTGACGGACTCGGTCTCACTGGTCCAGCAGGGCCTTGTTaGCCGTGTCTTGGACTTCTG +
Preference number: 3 (lower is better)
Translates to: LDVTSSHVFGVDGLGLTGPAGPC*PCLGLL
Trigger: CAGAAGTCCAAGACACGGCAAACAAGGCCCTGCTGG...ACCAGTGAGACCGAGTCCGTCAACACCGAAAACGTGGCTGGAGGTGACATCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CAA 90 bp GAACAGGGCCAGCAGGGCCTTGTTTGCCGTGTCTTGGACTTCTGTGAGCCAGTTTCAATCTTCTCCTCCTaGGATTCCCCCACTGCCGGC +
Preference number: 3 (lower is better)
Translates to: EQGQQGLVCRVLDFCEPVSIFSS*DSPTAG
Trigger: GCCGGCAGTGGGGGAATCCAAGGAGGAGAAGATTGA...AACTGGCTCACAGAAGTCCAAGACACGGCAAACAAGGCCCTGCTGGCCCTGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CAA 90 bp GTCATCCATGTTGATCTTGGTGGCGGGTGGAGACTCTCCGTCAGCCGTGATGGATCAATCTTCTCCTCCTaGGATTCCCCCACTGCCGGC +
Preference number: 3 (lower is better)
Translates to: VIHVDLGGGWRLSVSRDGSIFSS*DSPTAG
Trigger: GCCGGCAGTGGGGGAATCCAAGGAGGAGAAGATTGA...TCCATCACGGCTGACGGAGAGTCTCCACCCGCCACCAAGATCAACATGGATGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CAA 90 bp CTGGAGGTCATCCATGTTGATCTTGGTGGCGGGTGGAGACTCTCCGTCAGCCGTGTGTACAGCTTTCCCTaGAAGAGCTGGACCCCGATG +
Preference number: 3 (lower is better)
Translates to: LEVIHVDLGGGWRLSVSRVYSFP*KSWTPM
Trigger: CATCGGGGTCCAGCTCTTCAAGGGAAAGCTGTACAC...ACGGCTGACGGAGAGTCTCCACCCGCCACCAAGATCAACATGGATGACCTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CAA 90 bp CTCATTTTCATTGGGCTGGAGGTCATCCATGTTGATCTTGGTGGCGGGTGGAGAGGACCACCTGGAGACTaGGGACTCCGGACACCAGCC +
Preference number: 3 (lower is better)
Translates to: LIFIGLEVIHVDLGGGWRGPPGD*GLRTPA
Trigger: GGCTGGTGTCCGGAGTCCCAAGTCTCCAGGTGGTCC...TCTCCACCCGCCACCAAGATCAACATGGATGACCTCCAGCCCAATGAAAATGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CAA 90 bp GTCATCCATGTTGATCTTGGTGGCGGGTGGAGACTCTCCGTCAGCCGTGATGGAAAATCTCCCCGGGCCTaGGCCTTCTCCCTCTCTTTG +
Preference number: 3 (lower is better)
Translates to: VIHVDLGGGWRLSVSRDGKSPRA*AFSLSL
Trigger: CAAAGAGAGGGAGAAGGCCAAGGCCCGGGGAGATTT...TCCATCACGGCTGACGGAGAGTCTCCACCCGCCACCAAGATCAACATGGATGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672721.1
ENST00000672806.1
3UTR TCA 72 bp CGCGCACCCAGGCTCCGCGTCTGGTCCCAACAGAAATaGATGAAGACGCTGTTCCGGTTAACTCCAGGTCAC +
Preference number: 3 (lower is better)
Translates to: RAPRLRVWSQQK*MKTLFRLTPGH
Trigger: GTGACCTGGAGTTAACCGGAACAGCGTCTTCATTCATTTCTGTTGGGACCAGACGCGGAGCCTGGGTGCGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000327702.12
ENST00000335762.9
ENST00000347598.9
ENST00000399603.6
ENST00000399617.5
ENST00000399634.5
ENST00000399641.6
ENST00000399655.6
ENST00000406454.7
ENST00000642375.2
ENST00000643038.2
ENST00000643528.1
ENST00000643730.1
ENST00000644235.2
ENST00000644369.2
ENST00000646280.1
ENST00000647229.1
ENST00000647327.2
3UTR CCA 72 bp CTGAGAGTGTTTCCTGGAGTTGGCCTGGTTCAGCTCTaGGCAGGTGTAGGAGTTGGGGCACTGACCATCGGA +
Preference number: 3 (lower is better)
Translates to: LRVFPGVGLVQL*AGVGVGALTIG
Trigger: TCCGATGGTCAGTGCCCCAACTCCTACACCTGCCCAGAGCTGAACCAGGCCAACTCCAGGAAACACTCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR CCA 72 bp TCAGAAGCAGCTGTCCTGGTGGTGAATCCCGGCCAGTaGATACCCGTGATTCTGACCCATCTACAGAGGCCC +
Preference number: 3 (lower is better)
Translates to: SEAAVLVVNPGQ*IPVILTHLQRP
Trigger: GGGCCTCTGTAGATGGGTCAGAATCACGGGTATCCACTGGCCGGGATTCACCACCAGGACAGCTGCTTCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR CCA 72 bp TCCAGGGACTCAGCTGTGCTCCATGATGCTCCTAACTaGGTGGTGACCTTTATCCCCCTCTTGCCAGAGCCC +
Preference number: 3 (lower is better)
Translates to: SRDSAVLHDAPN*VVTFIPLLPEP
Trigger: GGGCTCTGGCAAGAGGGGGATAAAGGTCACCACCCAGTTAGGAGCATCATGGAGCACAGCTGAGTCCCTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR CAA 90 bp TTTGCTTCTCTTGTGACTCTACAGGAGAGACTTCTCTTTTCTCCTGGCCAATGGCCTCTCCGGGCCGGGTaGGGGTCCTCCTGGAAGTCC +
Preference number: 3 (lower is better)
Translates to: FASLVTLQERLLFSPGQWPLRAG*GSSWKS
Trigger: GGACTTCCAGGAGGACCCCAACCCGGCCCGGAGAGG...CCATTGGCCAGGAGAAAAGAGAAGTCTCTCCTGTAGAGTCACAAGAGAAGCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR CAA 90 bp GTTTTTGCTTTCAAACGGCCCCAGATTCAGATCTTCCCACAGCTAAACCAGAAACTCAGCACCACCTGGTaGGGCGGAGCCGGCGGCGCA +
Preference number: 3 (lower is better)
Translates to: VFAFKRPQIQIFPQLNQKLSTTW*GGAGGA
Trigger: TGCGCCGCCGGCTCCGCCCAACCAGGTGGTGCTGAG...TTTCTGGTTTAGCTGTGGGAAGATCTGAATCTGGGGCCGTTTGAAAGCAAAAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR CAA 90 bp GATGATGGGGTGGTCAACCTCCCCGTCTTTGTACGTGATGTAGTTGCCCTTGCAAGGGCCAGCAGGGCCTaGTTTGCCGTGTCTTGGACT +
Preference number: 3 (lower is better)
Translates to: DDGVVNLPVFVRDVVALARASRA*FAVSWT
Trigger: AGTCCAAGACACGGCAAACAAGGCCCTGCTGGCCCT...TGCAAGGGCAACTACATCACGTACAAAGACGGGGAGGTTGACCACCCCATCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CAA 90 bp GTCATCCATGTTGATCTTGGTGGCGGGTGGAGACTCTCCGTCAGCCGTGATGGATCCGCCTCTGTCTGCTaGGAACTGTCTGAACAGGTG +
Preference number: 3 (lower is better)
Translates to: VIHVDLGGGWRLSVSRDGSASVC*ELSEQV
Trigger: CACCTGTTCAGACAGTTCCAAGCAGACAGAGGCGGA...TCCATCACGGCTGACGGAGAGTCTCCACCCGCCACCAAGATCAACATGGATGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CAA 90 bp CCGTTCTGTCCACCCCTGATGCCTGGGAATCAAAGGTCTTTCTCAGAGGCCTACTACTGGTGCTGGTTCTaGGGGATGTACCTCCGCAGG +
Preference number: 3 (lower is better)
Translates to: PFCPPLMPGNQRSFSEAYYWCWF*GMYLRR
Trigger: CCTGCGGAGGTACATCCCCAAGAACCAGCACCAGTA...GTAGGCCTCTGAGAAAGACCTTTGATTCCCAGGCATCAGGGGTGGACAGAACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR CAA 90 bp GGGGCCCTTGTCTTCCGTGTGGGAGTCGATGGAGCGGTACAGCAGCTCTGGCCATTGGAATTGGTGGCGTaGGAATCATCTTCTGGAAAG +
Preference number: 3 (lower is better)
Translates to: GALVFRVGVDGAVQQLWPLELVA*ESSSGK
Trigger: CTTTCCAGAAGATGATTCCAACGCCACCAATTCCAA...TGGCCAGAGCTGCTGTACCGCTCCATCGACTCCCACACGGAAGACAAGGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CAA 90 bp CTTATCCTCATTTTCATTGGGCTGGAGGTCATCCATGTTGATCTTGGTGGCGGGGGACCACCTGGAGACTaGGGACTCCGGACACCAGCC +
Preference number: 3 (lower is better)
Translates to: LILIFIGLEVIHVDLGGGGPPGD*GLRTPA
Trigger: GGCTGGTGTCCGGAGTCCCAAGTCTCCAGGTGGTCC...CCCGCCACCAAGATCAACATGGATGACCTCCAGCCCAATGAAAATGAGGATAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CAA 90 bp GAACAGGGCCAGCAGGGCCTTGTTTGCCGTGTCTTGGACTTCTGTGAGCCAGTTAGGGGGACCATGGCCTaGATGATGGAATTCAGGACC +
Preference number: 3 (lower is better)
Translates to: EQGQQGLVCRVLDFCEPVRGTMA*MMEFRT
Trigger: GGTCCTGAATTCCATCATCAAGGCCATGGTCCCCCT...AACTGGCTCACAGAAGTCCAAGACACGGCAAACAAGGCCCTGCTGGCCCTGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000672721.1
ENST00000672806.1
3UTR GCA 72 bp GACGGAGGACGGAGGCTCCTGCAGGTGTCAATTTCATaGACTTCCCAGGGAAGGTTGTCTGTATGTCTCCCG +
Preference number: 3 (lower is better)
Translates to: DGGRRLLQVSIS*TSQGRLSVCLP
Trigger: CGGGAGACATACAGACAACCTTCCCTGGGAAGTGCATGAAATTGACACCTGCAGGAGCCTCCGTCCTCCGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR CCA 72 bp GACTGCGTAGTCACTGGTGTGCACGGGCACATGGTGTaGGTGCATATACACGGGCAGGACATATGCACACAG +
Preference number: 3 (lower is better)
Translates to: DCVVTGVHGHMV*VHIHGQDICTQ
Trigger: CTGTGTGCATATGTCCTGCCCGTGTATATGCACCCACACCATGTGCCCGTGCACACCAGTGACTACGCAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR CAA 90 bp GTTTTTGCTTTCAAACGGCCCCAGATTCAGATCTTCCCACAGCTAAACCAGAAACCTCTCCGGGCCGGGTaGGGGTCCTCCTGGAAGTCC +
Preference number: 3 (lower is better)
Translates to: VFAFKRPQIQIFPQLNQKPLRAG*GSSWKS
Trigger: GGACTTCCAGGAGGACCCCAACCCGGCCCGGAGAGG...TTTCTGGTTTAGCTGTGGGAAGATCTGAATCTGGGGCCGTTTGAAAGCAAAAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR CAA 90 bp TGGCTGCCAGAACATTGTCAAAGTCAAACTTGCTGTTCTCCCAGCTGCGGGGTTCGGCTGAACTTTGACTaGGAGATCCGGTGGGCCAGC +
Preference number: 3 (lower is better)
Translates to: WLPEHCQSQTCCSPSCGVRLNFD*EIRWAS
Trigger: GCTGGCCCACCGGATCTCCAAGTCAAAGTTCAGCCG...AACCCCGCAGCTGGGAGAACAGCAAGTTTGACTTTGACAATGTTCTGGCAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CAA 90 bp CCAGGGAAGGTTGTCTGTATGTCTCCCGTGCTCAGGAGGCATGATTCAGAAAGTCGGCTGAACTTTGACTaGGAGATCCGGTGGGCCAGC +
Preference number: 3 (lower is better)
Translates to: PGKVVCMSPVLRRHDSESRLNFD*EIRWAS
Trigger: GCTGGCCCACCGGATCTCCAAGTCAAAGTTCAGCCG...ACTTTCTGAATCATGCCTCCTGAGCACGGGAGACATACAGACAACCTTCCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR CAA 90 bp CCTTGCATTCCGCCTCTGTCTGCTTGGAACTGTCTGAACAGGTGTACAGCTTTCCGGCTGAACTTTGACTaGGAGATCCGGTGGGCCAGC +
Preference number: 3 (lower is better)
Translates to: PCIPPLSAWNCLNRCTAFRLNFD*EIRWAS
Trigger: GCTGGCCCACCGGATCTCCAAGTCAAAGTTCAGCCG...GAAAGCTGTACACCTGTTCAGACAGTTCCAAGCAGACAGAGGCGGAATGCAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CAA 90 bp GACCATGTGTGGGCACAGACACCGTGTACCCTAAGGAAGGTGTCAGGGCAACGCGCAATGGTGAGCGTGTaGAGGAACACCAGGAAAATC +
Preference number: 3 (lower is better)
Translates to: DHVWAQTPCTLRKVSGQRAMVSV*RNTRKI
Trigger: GATTTTCCTGGTGTTCCTCAACACGCTCACCATTGC...GCGTTGCCCTGACACCTTCCTTAGGGTACACGGTGTCTGTGCCCACACATGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR CAA 90 bp GATGATGGGGTGGTCAACCTCCCCGTCTTTGTACGTGATGTAGTTGCCCTTGCACCAGCAGGGCCTTGTTaGCCGTGTCTTGGACTTCTG +
Preference number: 3 (lower is better)
Translates to: DDGVVNLPVFVRDVVALAPAGPC*PCLGLL
Trigger: CAGAAGTCCAAGACACGGCAAACAAGGCCCTGCTGG...TGCAAGGGCAACTACATCACGTACAAAGACGGGGAGGTTGACCACCCCATCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CAA 90 bp TCATTTTCATTGGGCTGGAGGTCATCCATGTTGATCTTGGTGGCGGGTGGAGACAGGGCCAGCAGGGCCTaGTTTGCCGTGTCTTGGACT +
Preference number: 3 (lower is better)
Translates to: SFSLGWRSSMLILVAGGDRASRA*FAVSWT
Trigger: AGTCCAAGACACGGCAAACAAGGCCCTGCTGGCCCT...GTCTCCACCCGCCACCAAGATCAACATGGATGACCTCCAGCCCAATGAAAATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CAA 90 bp GGCTTCTGGCATGGGCACTGCCTTTTCCTTAAGGTGAAGCTCAGAGAGTGGTCGAGTGGGGACATGATCTaGGTCTCCACCAGGATGGTC +
Preference number: 3 (lower is better)
Translates to: GFWHGHCLFLKVKLREWSSGDMI*VSTRMV
Trigger: GACCATCCTGGTGGAGACCAAGATCATGTCCCCACT...CGACCACTCTCTGAGCTTCACCTTAAGGAAAAGGCAGTGCCCATGCCAGAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CAA 90 bp ATGTTGATCTTGGTGGCGGGTGGAGACTCTCCGTCAGCCGTGATGGATTTCAGCAGTGGGGACATGATCTaGGTCTCCACCAGGATGGTC +
Preference number: 3 (lower is better)
Translates to: MLILVAGGDSPSAVMDFSSGDMI*VSTRMV
Trigger: GACCATCCTGGTGGAGACCAAGATCATGTCCCCACT...GCTGAAATCCATCACGGCTGACGGAGAGTCTCCACCCGCCACCAAGATCAACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CAA 90 bp CCGTTCTGTCCACCCCTGATGCCTGGGAATCAAAGGTCTTTCTCAGAGGCCTACCTCTTCCTCCTCCTTTaGGGCAGATGTGAGGCTCTC +
Preference number: 3 (lower is better)
Translates to: PFCPPLMPGNQRSFSEAYLFLLL*GRCEAL
Trigger: GAGAGCCTCACATCTGCCCAAAAGGAGGAGGAAGAG...GTAGGCCTCTGAGAAAGACCTTTGATTCCCAGGCATCAGGGGTGGACAGAACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR CAA 90 bp GACTGCGGCGCGGCACTTCCTTCTGCAGAACCGATTCCACCGGCGCCAGTAGCGTTTGCCCCATCTGCTTaGGTTGCTTGTTCTAAAATT +
Preference number: 3 (lower is better)
Translates to: DCGAALPSAEPIPPAPVAFAPSA*VACSKI
Trigger: AATTTTAGAACAAGCAACCAAAGCAGATGGGGCAAA...CGCTACTGGCGCCGGTGGAATCGGTTCTGCAGAAGGAAGTGCCGCGCCGCAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672721.1
ENST00000672806.1
3UTR GCA 72 bp GAGGCAGGAAAAGAGAAGGTGCGCACAGCTTTGGGATaGTGGAGACACCTCCTGAAGGGGATCTTTCTGCAC +
Preference number: 3 (lower is better)
Translates to: EAGKEKVRTALG*WRHLLKGIFLH
Trigger: GTGCAGAAAGATCCCCTTCAGGAGGTGTCTCCAGCATCCCAAAGCTGTGCGCACCTTCTCTTTTCCTGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR GCA 72 bp CCAAAAGGTGTTATGGTAGCCTGGGGGCTGCTCAGTTaGTCTTATAGCCTCCCTCAGAAGCAGCTGTCCTGG +
Preference number: 3 (lower is better)
Translates to: PKGVMVAWGLLS*SYSLPQKQLSW
Trigger: CCAGGACAGCTGCTTCTGAGGGAGGCTATAAGAGCAACTGAGCAGCCCCCAGGCTACCATAACACCTTTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR GCA 72 bp CTCCCGTGCTCAGGAGGCATGATTCAGAAAGTCCACTaGAGGCTCTCCAGACTGCCTCAGACATCGTCAGAA +
Preference number: 3 (lower is better)
Translates to: LPCSGGMIQKVH*RLSRLPQTSSE
Trigger: TTCTGACGATGTCTGAGGCAGTCTGGAGAGCCTGCAGTGGACTTTCTGAATCATGCCTCCTGAGCACGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR CCA 72 bp GCAGGAAAAGAGAAGGTGCGCACAGCTTTGGGATGCTaGAGACACCTCCTGAAGGGGATCTTTCTGCACAGG +
Preference number: 3 (lower is better)
Translates to: AGKEKVRTALGC*RHLLKGIFLHR
Trigger: CCTGTGCAGAAAGATCCCCTTCAGGAGGTGTCTCCAGCATCCCAAAGCTGTGCGCACCTTCTCTTTTCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR CAA 90 bp TCTTCAGCTGCATGGGCAGGAGACATGCTGGGTGGAGAAAAGCTGGGAGAAAGTGAGCCCCTGCTGTCCTaGTTGGGTAGAGCAACAAGA +
Preference number: 3 (lower is better)
Translates to: SSAAWAGDMLGGEKLGESEPLLS*LGRATR
Trigger: TCTTGTTGCTCTACCCAACAAGGACAGCAGGGGCTC...ACTTTCTCCCAGCTTTTCTCCACCCAGCATGTCTCCTGCCCATGCAGCTGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR CAA 90 bp CCAGGGAAGGTTGTCTGTATGTCTCCCGTGCTCAGGAGGCATGATTCAGAAAGTCCAGCAGGGCCTTGTTaGCCGTGTCTTGGACTTCTG +
Preference number: 3 (lower is better)
Translates to: PGKVVCMSPVLRRHDSESPAGPC*PCLGLL
Trigger: CAGAAGTCCAAGACACGGCAAACAAGGCCCTGCTGG...ACTTTCTGAATCATGCCTCCTGAGCACGGGAGACATACAGACAACCTTCCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR CAA 90 bp TCATTTTCATTGGGCTGGAGGTCATCCATGTTGATCTTGGTGGCGGGTGGAGACCCAGCAGGGCCTTGTTaGCCGTGTCTTGGACTTCTG +
Preference number: 3 (lower is better)
Translates to: SFSLGWRSSMLILVAGGDPAGPC*PCLGLL
Trigger: CAGAAGTCCAAGACACGGCAAACAAGGCCCTGCTGG...GTCTCCACCCGCCACCAAGATCAACATGGATGACCTCCAGCCCAATGAAAATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CAA 90 bp GATGATGGGGTGGTCAACCTCCCCGTCTTTGTACGTGATGTAGTTGCCCTTGCAAGTGGGGACATGATCTaGGTCTCCACCAGGATGGTC +
Preference number: 3 (lower is better)
Translates to: DDGVVNLPVFVRDVVALASGDMI*VSTRMV
Trigger: GACCATCCTGGTGGAGACCAAGATCATGTCCCCACT...TGCAAGGGCAACTACATCACGTACAAAGACGGGGAGGTTGACCACCCCATCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CAA 90 bp CCTTGCATTCCGCCTCTGTCTGCTTGGAACTGTCTGAACAGGTGTACAGCTTTCTCAATCTTCTCCTCCTaGGATTCCCCCACTGCCGGC +
Preference number: 3 (lower is better)
Translates to: PCIPPLSAWNCLNRCTAFSIFSS*DSPTAG
Trigger: GCCGGCAGTGGGGGAATCCAAGGAGGAGAAGATTGA...GAAAGCTGTACACCTGTTCAGACAGTTCCAAGCAGACAGAGGCGGAATGCAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CAA 90 bp AGGTTGGTGAAGATCGTGTCATTGACAATGCGGTGGCACTGGAGGCGAAACCTGTGGAGGTCATCCATGTaGATCTTGGTGGCGGGTGGA +
Preference number: 3 (lower is better)
Translates to: RLVKIVSLTMRWHWRRNLWRSSM*ILVAGG
Trigger: TCCACCCGCCACCAAGATCAACATGGATGACCTCCA...CAGGTTTCGCCTCCAGTGCCACCGCATTGTCAATGACACGATCTTCACCAACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CAA 90 bp CCAGGGAAGGTTGTCTGTATGTCTCCCGTGCTCAGGAGGCATGATTCAGAAAGTACATGCTTTAGCCCCTaGGCCCTGTTGATGGCCCTC +
Preference number: 3 (lower is better)
Translates to: PGKVVCMSPVLRRHDSESTCFSP*ALLMAL
Trigger: GAGGGCCATCAACAGGGCCAAGGGGCTAAAGCATGT...ACTTTCTGAATCATGCCTCCTGAGCACGGGAGACATACAGACAACCTTCCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR CAA 90 bp GTTCTGTCCACCCCTGATGCCTGGGAATCAAAGGTCTTTCTCAGAGGCCTACCTTCCGCCTCTGTCTGCTaGGAACTGTCTGAACAGGTG +
Preference number: 3 (lower is better)
Translates to: VLSTPDAWESKVFLRGLPSASVC*ELSEQV
Trigger: CACCTGTTCAGACAGTTCCAAGCAGACAGAGGCGGA...AGGTAGGCCTCTGAGAAAGACCTTTGATTCCCAGGCATCAGGGGTGGACAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR CAA 90 bp CCCGTGATTCTGACCCATCTACAGAGGCCCAGGGTGGAAGGTGTGGCTCATACCGCAGGCCTAATCTTCTaGCCCTTACACAAGGAACAA +
Preference number: 3 (lower is better)
Translates to: PVILTHLQRPRVEGVAHTAGLIF*PLHKEQ
Trigger: TTGTTCCTTGTGTAAGGGCAAGAAGATTAGGCCTGC...GGTATGAGCCACACCTTCCACCCTGGGCCTCTGTAGATGGGTCAGAATCACGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR CAA 90 bp CCTTGCATTCCGCCTCTGTCTGCTTGGAACTGTCTGAACAGGTGTACAGCTTTCAAATCTCCCCGGGCCTaGGCCTTCTCCCTCTCTTTG +
Preference number: 3 (lower is better)
Translates to: PCIPPLSAWNCLNRCTAFKSPRA*AFSLSL
Trigger: CAAAGAGAGGGAGAAGGCCAAGGCCCGGGGAGATTT...GAAAGCTGTACACCTGTTCAGACAGTTCCAAGCAGACAGAGGCGGAATGCAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672721.1
ENST00000672806.1
3UTR CCA 72 bp TCACCAGTTCCTTTCTCGAGCCCCTGCTGTCCTTGTTaGGTAGAGCAACAAGAATCCGGAAGTGAGGATGCC +
Preference number: 3 (lower is better)
Translates to: SPVPFSSPCCPC*VEQQESGSEDA
Trigger: GGCATCCTCACTTCCGGATTCTTGTTGCTCTACCCAACAAGGACAGCAGGGGCTCGAGAAAGGAACTGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR CAA 90 bp GAAATGAATGTACAATGTATGTCTGATTCACACCAGGGGAAGTGGCACAGTGCCTGCTGTAGGGTCCTTTaGGTGAGGGCGCGCGGGAAG +
Preference number: 3 (lower is better)
Translates to: EMNVQCMSDSHQGKWHSACCRVL*VRARGK
Trigger: CTTCCCGCGCGCCCTCACCAAAAGGACCCTACAGCA...GGCACTGTGCCACTTCCCCTGGTGTGAATCAGACATACATTGTACATTCATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR CAA 90 bp CTTTGCCACTTCAGGTGCTGTGGCTCAAACCTCTTAAAGTCATCCCAGGAAAAATGCTGTAGGGTCCTTTaGGTGAGGGCGCGCGGGAAG +
Preference number: 3 (lower is better)
Translates to: LCHFRCCGSNLLKSSQEKCCRVL*VRARGK
Trigger: CTTCCCGCGCGCCCTCACCAAAAGGACCCTACAGCA...TTTTTCCTGGGATGACTTTAAGAGGTTTGAGCCACAGCACCTGAAGTGGCAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR CAA 90 bp TCTTCAGCTGCATGGGCAGGAGACATGCTGGGTGGAGAAAAGCTGGGAGAAAGTCCCCTGCTGTCCTTGTaGGGTAGAGCAACAAGAATC +
Preference number: 3 (lower is better)
Translates to: SSAAWAGDMLGGEKLGESPLLSL*GRATRI
Trigger: GATTCTTGTTGCTCTACCCAACAAGGACAGCAGGGG...ACTTTCTCCCAGCTTTTCTCCACCCAGCATGTCTCCTGCCCATGCAGCTGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR CAA 90 bp GGCTTCTGGCATGGGCACTGCCTTTTCCTTAAGGTGAAGCTCAGAGAGTGGTCGCTTGTTTGCCGTGTCTaGGACTTCTGTGAGCCAGTT +
Preference number: 3 (lower is better)
Translates to: GFWHGHCLFLKVKLREWSLVCRV*DFCEPV
Trigger: AACTGGCTCACAGAAGTCCAAGACACGGCAAACAAG...CGACCACTCTCTGAGCTTCACCTTAAGGAAAAGGCAGTGCCCATGCCAGAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CAA 90 bp AGCTTCTTTCTCTCCTTCTCCTCTTCCTCCTCCTTTTGGGCAGATGTGAGGCTCCTCTTCCTCCTCCTTTaGGGCAGATGTGAGGCTCTC +
Preference number: 3 (lower is better)
Translates to: SFFLSFSSSSSFWADVRLLFLLL*GRCEAL
Trigger: GAGAGCCTCACATCTGCCCAAAAGGAGGAGGAAGAG...GAGCCTCACATCTGCCCAAAAGGAGGAGGAAGAGGAGAAGGAGAGAAAGAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CAA 90 bp AGGAAGGGCACAGATGATCCAAAGAACAGGAATTCTGACCCTGCCTCATTCAGCTCAATCTTCTCCTCCTaGGATTCCCCCACTGCCGGC +
Preference number: 3 (lower is better)
Translates to: RKGTDDPKNRNSDPASFSSIFSS*DSPTAG
Trigger: GCCGGCAGTGGGGGAATCCAAGGAGGAGAAGATTGA...GCTGAATGAGGCAGGGTCAGAATTCCTGTTCTTTGGATCATCTGTGCCCTTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR CAA 90 bp TCTGTGTTGCCTCTGGGAAAACTACCAAAGGAGGGAGGGGAAGGCTCAGTAAGCTCATCCATGTTGATCTaGGTGGCGGGTGGAGACTCT +
Preference number: 3 (lower is better)
Translates to: SVLPLGKLPKEGGEGSVSSSMLI*VAGGDS
Trigger: AGAGTCTCCACCCGCCACCAAGATCAACATGGATGA...GCTTACTGAGCCTTCCCCTCCCTCCTTTGGTAGTTTTCCCAGAGGCAACACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR CAA 90 bp TCATTTTCATTGGGCTGGAGGTCATCCATGTTGATCTTGGTGGCGGGTGGAGACTGGAGGTCATCCATGTaGATCTTGGTGGCGGGTGGA +
Preference number: 3 (lower is better)
Translates to: SFSLGWRSSMLILVAGGDWRSSM*ILVAGG
Trigger: TCCACCCGCCACCAAGATCAACATGGATGACCTCCA...GTCTCCACCCGCCACCAAGATCAACATGGATGACCTCCAGCCCAATGAAAATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CAA 90 bp GTTCTGTCCACCCCTGATGCCTGGGAATCAAAGGTCTTTCTCAGAGGCCTACCTGTGAAGATCGTGTCATaGACAATGCGGTGGCACTGG +
Preference number: 3 (lower is better)
Translates to: VLSTPDAWESKVFLRGLPVKIVS*TMRWHW
Trigger: CCAGTGCCACCGCATTGTCAATGACACGATCTTCAC...AGGTAGGCCTCTGAGAAAGACCTTTGATTCCCAGGCATCAGGGGTGGACAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR CAA 90 bp CTCATTTTCATTGGGCTGGAGGTCATCCATGTTGATCTTGGTGGCGGGTGGAGAGTGTACAGCTTTCCCTaGAAGAGCTGGACCCCGATG +
Preference number: 3 (lower is better)
Translates to: LIFIGLEVIHVDLGGGWRVYSFP*KSWTPM
Trigger: CATCGGGGTCCAGCTCTTCAAGGGAAAGCTGTACAC...TCTCCACCCGCCACCAAGATCAACATGGATGACCTCCAGCCCAATGAAAATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CAA 90 bp AGGAAGGGCACAGATGATCCAAAGAACAGGAATTCTGACCCTGCCTCATTCAGCTGGGCCTGGAGAGGTTaGGTCTGCCAGTCTATGAGC +
Preference number: 3 (lower is better)
Translates to: RKGTDDPKNRNSDPASFSWAWRG*VCQSMS
Trigger: GCTCATAGACTGGCAGACCAAACCTCTCCAGGCCCA...GCTGAATGAGGCAGGGTCAGAATTCCTGTTCTTTGGATCATCTGTGCCCTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR CAA 90 bp TCTGCATTGCCTAGGATATGGTTCCTGAAGGAGGTGTGCTGGACCGGGTCCTCACGTTCCAGGTTGGAATaGGTGGCGTTGGAATCATCT +
Preference number: 3 (lower is better)
Translates to: SALPRIWFLKEVCWTGSSRSRLE*VALESS
Trigger: AGATGATTCCAACGCCACCAATTCCAACCTGGAACG...TGAGGACCCGGTCCAGCACACCTCCTTCAGGAACCATATCCTAGGCAATGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CAA 90 bp ATGTTGATCTTGGTGGCGGGTGGAGACTCTCCGTCAGCCGTGATGGATTTCAGCGCAAAGTTGTCAAAGTaGGTGATGCCGTGCTTGGGA +
Preference number: 3 (lower is better)
Translates to: MLILVAGGDSPSAVMDFSAKLSK*VMPCLG
Trigger: TCCCAAGCACGGCATCACCAACTTTGACAACTTTGC...GCTGAAATCCATCACGGCTGACGGAGAGTCTCCACCCGCCACCAAGATCAACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672721.1
ENST00000672806.1
3UTR TCA 72 bp AAAAGGTGGGGGTGTCCCTGTGTAGCAGCCAGTAACTaGTCTGAAGGGAGAGGACTTGGCTCTGGTGATGTA +
Preference number: 3 (lower is better)
Translates to: KRWGCPCVAASN*SEGRGLGSGDV
Trigger: TACATCACCAGAGCCAAGTCCTCTCCCTTCAGATCAGTTACTGGCTGCTACACAGGGACACCCCCACCTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR GCA 72 bp AGGGATTCTTGCTCTTGGCCTCCTGTTGATCTGTGTTaGCTCTGGGAAAACTACCAAAGGAGGGAGGGGAAG +
Preference number: 3 (lower is better)
Translates to: RDSCSWPPVDLC*LWENYQRREGK
Trigger: CTTCCCCTCCCTCCTTTGGTAGTTTTCCCAGAGGCAACACAGATCAACAGGAGGCCAAGAGCAAGAATCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR CCA 72 bp GGATGGAGAAAGGAGCACGCAGAGTTGACTTTCAGATaGATCAGGGTTTCACCAGTTCCTTTCTCGAGCCCC +
Preference number: 3 (lower is better)
Translates to: GWRKEHAELTFR*IRVSPVPFSSP
Trigger: GGGGCTCGAGAAAGGAACTGGTGAAACCCTGATCCATCTGAAAGTCAACTCTGCGTGCTCCTTTCTCCATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR CCA 72 bp AGCTTCTTTCTCTCCTTCTCCTCTTCCTCCTCCTTTTaGGCAGATGTGAGGCTCTCAGCATCAGCCAGGTTG +
Preference number: 3 (lower is better)
Translates to: SFFLSFSSSSSF*ADVRLSASARL
Trigger: CAACCTGGCTGATGCTGAGAGCCTCACATCTGCCCAAAAGGAGGAGGAAGAGGAGAAGGAGAGAAAGAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR CCA 72 bp CCTTCTCATCCTTCTCCAAAAGGTGTTATGGTAGCCTaGGGGCTGCTCAGTTGCTCTTATAGCCTCCCTCAG +
Preference number: 3 (lower is better)
Translates to: PSHPSPKGVMVA*GLLSCSYSLPQ
Trigger: CTGAGGGAGGCTATAAGAGCAACTGAGCAGCCCCCAGGCTACCATAACACCTTTTGGAGAAGGATGAGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR CAA 90 bp GTTTTTGCTTTCAAACGGCCCCAGATTCAGATCTTCCCACAGCTAAACCAGAAATGCTGTAGGGTCCTTTaGGTGAGGGCGCGCGGGAAG +
Preference number: 3 (lower is better)
Translates to: VFAFKRPQIQIFPQLNQKCCRVL*VRARGK
Trigger: CTTCCCGCGCGCCCTCACCAAAAGGACCCTACAGCA...TTTCTGGTTTAGCTGTGGGAAGATCTGAATCTGGGGCCGTTTGAAAGCAAAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR CAA 90 bp TCTTCAGCTGCATGGGCAGGAGACATGCTGGGTGGAGAAAAGCTGGGAGAAAGTAAGGAGCACGCAGAGTaGACTTTCAGATGGATCAGG +
Preference number: 3 (lower is better)
Translates to: SSAAWAGDMLGGEKLGESKEHAE*TFRWIR
Trigger: CCTGATCCATCTGAAAGTCAACTCTGCGTGCTCCTT...ACTTTCTCCCAGCTTTTCTCCACCCAGCATGTCTCCTGCCCATGCAGCTGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR CAA 90 bp CCCGTGATTCTGACCCATCTACAGAGGCCCAGGGTGGAAGGTGTGGCTCATACCTGCATCTCATCAAAGTaGAACTTTCCTCCAAAGAGC +
Preference number: 3 (lower is better)
Translates to: PVILTHLQRPRVEGVAHTCISSK*NFPPKS
Trigger: GCTCTTTGGAGGAAAGTTCAACTTTGATGAGATGCA...GGTATGAGCCACACCTTCCACCCTGGGCCTCTGTAGATGGGTCAGAATCACGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR CAA 90 bp GATGATGGGGTGGTCAACCTCCCCGTCTTTGTACGTGATGTAGTTGCCCTTGCATTGTCAAAGTCAAACTaGCTGTTCTCCCAGCTGCGG +
Preference number: 3 (lower is better)
Translates to: DDGVVNLPVFVRDVVALALSKSN*LFSQLR
Trigger: CCGCAGCTGGGAGAACAGCAAGTTTGACTTTGACAA...TGCAAGGGCAACTACATCACGTACAAAGACGGGGAGGTTGACCACCCCATCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CAA 90 bp CCGTTCTGTCCACCCCTGATGCCTGGGAATCAAAGGTCTTTCTCAGAGGCCTACCCAGTGAAGAGCATGTaGAGGATGTTCATGGCGATT +
Preference number: 3 (lower is better)
Translates to: PFCPPLMPGNQRSFSEAYPVKSM*RMFMAI
Trigger: AATCGCCATGAACATCCTCAACATGCTCTTCACTGG...GTAGGCCTCTGAGAAAGACCTTTGATTCCCAGGCATCAGGGGTGGACAGAACGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR CAA 90 bp TCATTTTCATTGGGCTGGAGGTCATCCATGTTGATCTTGGTGGCGGGTGGAGACTCCACTCGTTCCAGGTaGGAATTGGTGGCGTTGGAA +
Preference number: 3 (lower is better)
Translates to: SFSLGWRSSMLILVAGGDSTRSR*ELVALE
Trigger: TTCCAACGCCACCAATTCCAACCTGGAACGAGTGGA...GTCTCCACCCGCCACCAAGATCAACATGGATGACCTCCAGCCCAATGAAAATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CAA 90 bp AGCTTCTTTCTCTCCTTCTCCTCTTCCTCCTCCTTTTGGGCAGATGTGAGGCTCGCCTTCTCCCTCTCTTaGGAAAACTCTCCGCTCAAC +
Preference number: 3 (lower is better)
Translates to: SFFLSFSSSSSFWADVRLAFSLS*ENSPLN
Trigger: GTTGAGCGGAGAGTTTTCCAAAGAGAGGGAGAAGGC...GAGCCTCACATCTGCCCAAAAGGAGGAGGAAGAGGAGAAGGAGAGAAAGAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CAA 90 bp GGTTCTGATGGTACTACTTCCATCCAAGGGAGTCACTCTACTGCACCCTCCTTGAAGGAGCACGCAGAGTaGACTTTCAGATGGATCAGG +
Preference number: 3 (lower is better)
Translates to: GSDGTTSIQGSHSTAPSLKEHAE*TFRWIR
Trigger: CCTGATCCATCTGAAAGTCAACTCTGCGTGCTCCTT...CAAGGAGGGTGCAGTAGAGTGACTCCCTTGGATGGAAGTAGTACCATCAGAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR CAA 90 bp CCAGGGAAGGTTGTCTGTATGTCTCCCGTGCTCAGGAGGCATGATTCAGAAAGTGCAATGGTGAGCGTGTaGAGGAACACCAGGAAAATC +
Preference number: 3 (lower is better)
Translates to: PGKVVCMSPVLRRHDSESAMVSV*RNTRKI
Trigger: GATTTTCCTGGTGTTCCTCAACACGCTCACCATTGC...ACTTTCTGAATCATGCCTCCTGAGCACGGGAGACATACAGACAACCTTCCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR CAA 90 bp CCTTGCATTCCGCCTCTGTCTGCTTGGAACTGTCTGAACAGGTGTACAGCTTTCGCAATGGTGAGCGTGTaGAGGAACACCAGGAAAATC +
Preference number: 3 (lower is better)
Translates to: PCIPPLSAWNCLNRCTAFAMVSV*RNTRKI
Trigger: GATTTTCCTGGTGTTCCTCAACACGCTCACCATTGC...GAAAGCTGTACACCTGTTCAGACAGTTCCAAGCAGACAGAGGCGGAATGCAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CAA 90 bp TGGCTGCCAGAACATTGTCAAAGTCAAACTTGCTGTTCTCCCAGCTGCGGGGTTCTTGTTTGCCGTGTCTaGGACTTCTGTGAGCCAGTT +
Preference number: 3 (lower is better)
Translates to: WLPEHCQSQTCCSPSCGVLVCRV*DFCEPV
Trigger: AACTGGCTCACAGAAGTCCAAGACACGGCAAACAAG...AACCCCGCAGCTGGGAGAACAGCAAGTTTGACTTTGACAATGTTCTGGCAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CAA 90 bp CCGTTCTGTCCACCCCTGATGCCTGGGAATCAAAGGTCTTTCTCAGAGGCCTACAAGATCTTCACGACATaGATTGCACTGGACTGGATG +
Preference number: 3 (lower is better)
Translates to: PFCPPLMPGNQRSFSEAYKIFTT*IALDWM
Trigger: CATCCAGTCCAGTGCAATCAATGTCGTGAAGATCTT...GTAGGCCTCTGAGAAAGACCTTTGATTCCCAGGCATCAGGGGTGGACAGAACGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR CAA 90 bp CCTTGCATTCCGCCTCTGTCTGCTTGGAACTGTCTGAACAGGTGTACAGCTTTCTTGTCAAAGTCAAACTaGCTGTTCTCCCAGCTGCGG +
Preference number: 3 (lower is better)
Translates to: PCIPPLSAWNCLNRCTAFLSKSN*LFSQLR
Trigger: CCGCAGCTGGGAGAACAGCAAGTTTGACTTTGACAA...GAAAGCTGTACACCTGTTCAGACAGTTCCAAGCAGACAGAGGCGGAATGCAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CAA 90 bp CCTTGCATTCCGCCTCTGTCTGCTTGGAACTGTCTGAACAGGTGTACAGCTTTCACCACGTACCACACTTaGTACTGGTGCTGGTTCTTG +
Preference number: 3 (lower is better)
Translates to: PCIPPLSAWNCLNRCTAFTTYHT*YWCWFL
Trigger: CAAGAACCAGCACCAGTACAAAGTGTGGTACGTGGT...GAAAGCTGTACACCTGTTCAGACAGTTCCAAGCAGACAGAGGCGGAATGCAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR CAA 90 bp GATCTTGGTGGCGGGTGGAGACTCTCCGTCAGCCGTGATGGATTTCAGCTCAATTTGGAATTGGTGGCGTaGGAATCATCTTCTGGAAAG +
Preference number: 3 (lower is better)
Translates to: DLGGGWRLSVSRDGFQLNLELVA*ESSSGK
Trigger: CTTTCCAGAAGATGATTCCAACGCCACCAATTCCAA...ATTGAGCTGAAATCCATCACGGCTGACGGAGAGTCTCCACCCGCCACCAAGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672721.1
ENST00000672806.1
3UTR GCA 72 bp AGTGAAGTCAGAGGTGCCGGATTCCAGTCTCCGTTCTaGCAGTTCTTAGCAGTGGATCAATTAATCCTGGGC +
Preference number: 3 (lower is better)
Translates to: SEVRGAGFQSPF*QFLAVDQLILG
Trigger: GCCCAGGATTAATTGATCCACTGCTAAGAACTGGCAGAACGGAGACTGGAATCCGGCACCTCTGACTTCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR-3UTR CAA 90 bp GGTTCTGATGGTACTACTTCCATCCAAGGGAGTCACTCTACTGCACCCTCCTTGCATTGCCTTGTTCCTTaGAGTGGATTTCCCAGTGAG +
Preference number: 3 (lower is better)
Translates to: GSDGTTSIQGSHSTAPSLHCLVP*SGFPSE
Trigger: CTCACTGGGAAATCCACTCAAAGGAACAAGGCAATG...CAAGGAGGGTGCAGTAGAGTGACTCCCTTGGATGGAAGTAGTACCATCAGAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR CAA 90 bp AAAGAGATATTCCACTCGTTCCAGGTTGGAATTGGTGGCGTTGGAATCATCTTCGCCACGTTTTCGGTGTaGACGGACTCGGTCTCACTG +
Preference number: 3 (lower is better)
Translates to: KEIFHSFQVGIGGVGIIFATFSV*TDSVSL
Trigger: CAGTGAGACCGAGTCCGTCAACACCGAAAACGTGGC...GAAGATGATTCCAACGCCACCAATTCCAACCTGGAACGAGTGGAATATCTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CAA 90 bp TTATCGAATGTGCTCCTCCGGGTCTGCATCTCATCAAAGTTGAACTTTCCTCCATGGAGGTCATCCATGTaGATCTTGGTGGCGGGTGGA +
Preference number: 3 (lower is better)
Translates to: LSNVLLRVCISSKLNFPPWRSSM*ILVAGG
Trigger: TCCACCCGCCACCAAGATCAACATGGATGACCTCCA...TGGAGGAAAGTTCAACTTTGATGAGATGCAGACCCGGAGGAGCACATTCGATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR TCA 72 bp AGCAGTGGATCAATTAATCCTGGGCACTTAATTGTTTaGGCCTCCCTTCCCCCTTCTCCACAGAGGGATGCT +
Preference number: 3 (lower is better)
Translates to: SSGSINPGHLIV*ASLPPSPQRDA
Trigger: AGCATCCCTCTGTGGAGAAGGGGGAAGGGAGGCTCAAACAATTAAGTGCCCAGGATTAATTGATCCACTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR CCA 72 bp ATCAGGTTGGTGAAGATCGTGTCATTGACAATGCGGTaGCACTGGAGGCGAAACCTGTTGTTAGAGCTGAAG +
Preference number: 3 (lower is better)
Translates to: IRLVKIVSLTMR*HWRRNLLLELK
Trigger: CTTCAGCTCTAACAACAGGTTTCGCCTCCAGTGCCACCGCATTGTCAATGACACGATCTTCACCAACCTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CAA 90 bp GGTTCTGATGGTACTACTTCCATCCAAGGGAGTCACTCTACTGCACCCTCCTTGTTGTGCTGTGGTTCATaGATGTCACTACTTGTGCCA +
Preference number: 3 (lower is better)
Translates to: GSDGTTSIQGSHSTAPSLLCCGS*MSLLVP
Trigger: TGGCACAAGTAGTGACATCAATGAACCACAGCACAA...CAAGGAGGGTGCAGTAGAGTGACTCCCTTGGATGGAAGTAGTACCATCAGAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR CAA 90 bp TCTTCAGCTGCATGGGCAGGAGACATGCTGGGTGGAGAAAAGCTGGGAGAAAGTACATCACTTGGAAGATaGTGCTGTGGTTCATTGATG +
Preference number: 3 (lower is better)
Translates to: SSAAWAGDMLGGEKLGESTSLGR*CCGSLM
Trigger: CATCAATGAACCACAGCACAATCTTCCAAGTGATGT...ACTTTCTCCCAGCTTTTCTCCACCCAGCATGTCTCCTGCCCATGCAGCTGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR CAA 90 bp TCTTCAGCTGCATGGGCAGGAGACATGCTGGGTGGAGAAAAGCTGGGAGAAAGTACAAGCACCTGGAATTaGGAACTGGGAAATAGAATG +
Preference number: 3 (lower is better)
Translates to: SSAAWAGDMLGGEKLGESTSTWN*ELGNRM
Trigger: CATTCTATTTCCCAGTTCCAAATTCCAGGTGCTTGT...ACTTTCTCCCAGCTTTTCTCCACCCAGCATGTCTCCTGCCCATGCAGCTGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR CAA 90 bp AGGTTGGTGAAGATCGTGTCATTGACAATGCGGTGGCACTGGAGGCGAAACCTGTGCATCTCATCAAAGTaGAACTTTCCTCCAAAGAGC +
Preference number: 3 (lower is better)
Translates to: RLVKIVSLTMRWHWRRNLCISSK*NFPPKS
Trigger: GCTCTTTGGAGGAAAGTTCAACTTTGATGAGATGCA...CAGGTTTCGCCTCCAGTGCCACCGCATTGTCAATGACACGATCTTCACCAACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CAA 90 bp TGGCTGCCAGAACATTGTCAAAGTCAAACTTGCTGTTCTCCCAGCTGCGGGGTTTTATCCTCATTTTCATaGGGCTGGAGGTCATCCATG +
Preference number: 3 (lower is better)
Translates to: WLPEHCQSQTCCSPSCGVLSSFS*GWRSSM
Trigger: CATGGATGACCTCCAGCCCAATGAAAATGAGGATAA...AACCCCGCAGCTGGGAGAACAGCAAGTTTGACTTTGACAATGTTCTGGCAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CAA 90 bp CCTTGCATTCCGCCTCTGTCTGCTTGGAACTGTCTGAACAGGTGTACAGCTTTCAAGATCTTCACGACATaGATTGCACTGGACTGGATG +
Preference number: 3 (lower is better)
Translates to: PCIPPLSAWNCLNRCTAFKIFTT*IALDWM
Trigger: CATCCAGTCCAGTGCAATCAATGTCGTGAAGATCTT...GAAAGCTGTACACCTGTTCAGACAGTTCCAAGCAGACAGAGGCGGAATGCAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CAA 90 bp CTCATTTTCATTGGGCTGGAGGTCATCCATGTTGATCTTGGTGGCGGGTGGAGAATGGCTGCCAGAACATaGTCAAAGTCAAACTTGCTG +
Preference number: 3 (lower is better)
Translates to: LIFIGLEVIHVDLGGGWRMAART*SKSNLL
Trigger: CAGCAAGTTTGACTTTGACAATGTTCTGGCAGCCAT...TCTCCACCCGCCACCAAGATCAACATGGATGACCTCCAGCCCAATGAAAATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CAA 90 bp TCTGCATTGCCTAGGATATGGTTCCTGAAGGAGGTGTGCTGGACCGGGTCCTCATTTGCCCCATCTGCTTaGGTTGCTTGTTCTAAAATT +
Preference number: 3 (lower is better)
Translates to: SALPRIWFLKEVCWTGSSFAPSA*VACSKI
Trigger: AATTTTAGAACAAGCAACCAAAGCAGATGGGGCAAA...TGAGGACCCGGTCCAGCACACCTCCTTCAGGAACCATATCCTAGGCAATGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672721.1
ENST00000672806.1
3UTR CCA 72 bp ATCCCTACAAAGTCAAATTCCTTAGATCCTGAGAAGTaGAGTGCATGGGATGCCCTGAAAAGGTGGGGGTGT +
Preference number: 3 (lower is better)
Translates to: IPTKSNSLDPEK*SAWDALKRWGC
Trigger: ACACCCCCACCTTTTCAGGGCATCCCATGCACTCCACTTCTCAGGATCTAAGGAATTTGACTTTGTAGGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR CAA 90 bp GTTTTTGCTTTCAAACGGCCCCAGATTCAGATCTTCCCACAGCTAAACCAGAAACTGCAGCGGCTTCTATaGAACCTCCGTGGAAAAAGG +
Preference number: 3 (lower is better)
Translates to: VFAFKRPQIQIFPQLNQKLQRLL*NLRGKR
Trigger: CCTTTTTCCACGGAGGTTCAATAGAAGCCGCTGCAG...TTTCTGGTTTAGCTGTGGGAAGATCTGAATCTGGGGCCGTTTGAAAGCAAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR CAA 90 bp GAAATGAATGTACAATGTATGTCTGATTCACACCAGGGGAAGTGGCACAGTGCCGGGCATACACAATGGTaGGTAAAACTCTCCTGCAGC +
Preference number: 3 (lower is better)
Translates to: EMNVQCMSDSHQGKWHSAGHTQW*VKLSCS
Trigger: GCTGCAGGAGAGTTTTACCAACCATTGTGTATGCCC...GGCACTGTGCCACTTCCCCTGGTGTGAATCAGACATACATTGTACATTCATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR CAA 90 bp AATAGACCTTTCAGTGCTTCACCAACGGGGAATCTGTCGCCCTATTTCTTAATGCCCCTGCTGTCCTTGTaGGGTAGAGCAACAAGAATC +
Preference number: 3 (lower is better)
Translates to: NRPFSASPTGNLSPYFLMPLLSL*GRATRI
Trigger: GATTCTTGTTGCTCTACCCAACAAGGACAGCAGGGG...CATTAAGAAATAGGGCGACAGATTCCCCGTTGGTGAAGCACTGAAAGGTCTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR CAA 90 bp GGTTCTGATGGTACTACTTCCATCCAAGGGAGTCACTCTACTGCACCCTCCTTGAGGAATCAAGAAAGTTaGGATGACTTGGGTGTGGAT +
Preference number: 3 (lower is better)
Translates to: GSDGTTSIQGSHSTAPSLRNQES*DDLGVD
Trigger: ATCCACACCCAAGTCATCCAAACTTTCTTGATTCCT...CAAGGAGGGTGCAGTAGAGTGACTCCCTTGGATGGAAGTAGTACCATCAGAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR CAA 90 bp TTTGCTTCTCTTGTGACTCTACAGGAGAGACTTCTCTTTTCTCCTGGCCAATGGTCTACTGCACCCTCCTaGTCTGTGTATACAGTGCTC +
Preference number: 3 (lower is better)
Translates to: FASLVTLQERLLFSPGQWSTAPS*SVYTVL
Trigger: GAGCACTGTATACACAGACAAGGAGGGTGCAGTAGA...CCATTGGCCAGGAGAAAAGAGAAGTCTCTCCTGTAGAGTCACAAGAGAAGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR CAA 90 bp TTTGCTTCTCTTGTGACTCTACAGGAGAGACTTCTCTTTTCTCCTGGCCAATGGAAAGACCATGGATCTTaGCCACTTCAGGTGCTGTGG +
Preference number: 3 (lower is better)
Translates to: FASLVTLQERLLFSPGQWKDHGS*PLQVLW
Trigger: CCACAGCACCTGAAGTGGCAAAGATCCATGGTCTTT...CCATTGGCCAGGAGAAAAGAGAAGTCTCTCCTGTAGAGTCACAAGAGAAGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR CAA 90 bp GTTTTTGCTTTCAAACGGCCCCAGATTCAGATCTTCCCACAGCTAAACCAGAAAGGGCATACACAATGGTaGGTAAAACTCTCCTGCAGC +
Preference number: 3 (lower is better)
Translates to: VFAFKRPQIQIFPQLNQKGHTQW*VKLSCS
Trigger: GCTGCAGGAGAGTTTTACCAACCATTGTGTATGCCC...TTTCTGGTTTAGCTGTGGGAAGATCTGAATCTGGGGCCGTTTGAAAGCAAAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR CAA 90 bp CTTTGCCACTTCAGGTGCTGTGGCTCAAACCTCTTAAAGTCATCCCAGGAAAAAGACAGTGGTTTGTTTTaGCTTTCAAACGGCCCCAGA +
Preference number: 3 (lower is better)
Translates to: LCHFRCCGSNLLKSSQEKDSGLF*LSNGPR
Trigger: TCTGGGGCCGTTTGAAAGCAAAAACAAACCACTGTC...TTTTTCCTGGGATGACTTTAAGAGGTTTGAGCCACAGCACCTGAAGTGGCAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR CAA 90 bp CTTTGCCACTTCAGGTGCTGTGGCTCAAACCTCTTAAAGTCATCCCAGGAAAAAAGTAGCCACCATCTTTaGGGTGACTTCCAAAGTCCT +
Preference number: 3 (lower is better)
Translates to: LCHFRCCGSNLLKSSQEKSSHHL*GDFQSP
Trigger: AGGACTTTGGAAGTCACCCAAAAGATGGTGGCTACT...TTTTTCCTGGGATGACTTTAAGAGGTTTGAGCCACAGCACCTGAAGTGGCAAAG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR CAA 90 bp GGTTCTGATGGTACTACTTCCATCCAAGGGAGTCACTCTACTGCACCCTCCTTGATGATATTTCAATTCTaGGCCTCTAGGGATGGAGAT +
Preference number: 3 (lower is better)
Translates to: GSDGTTSIQGSHSTAPSLMIFQF*ASRDGD
Trigger: ATCTCCATCCCTAGAGGCCAAGAATTGAAATATCAT...CAAGGAGGGTGCAGTAGAGTGACTCCCTTGGATGGAAGTAGTACCATCAGAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR-3UTR CAA 90 bp CTTATCCTCATTTTCATTGGGCTGGAGGTCATCCATGTTGATCTTGGTGGCGGGTGCATCTCATCAAAGTaGAACTTTCCTCCAAAGAGC +
Preference number: 3 (lower is better)
Translates to: LILIFIGLEVIHVDLGGGCISSK*NFPPKS
Trigger: GCTCTTTGGAGGAAAGTTCAACTTTGATGAGATGCA...CCCGCCACCAAGATCAACATGGATGACCTCCAGCCCAATGAAAATGAGGATAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000480911.6
ENST00000646676.2
ENST00000672721.1
ENST00000672806.1
3UTR-3UTR CAA 90 bp AGTTTAGACCACTCGCAATGGTTACTTCCTAGGAAACTGGCTTGTTCCTTGATTATGTTCATGGCGATTTaGAACAGGCAGCTCTGGCCG +
Preference number: 3 (lower is better)
Translates to: SLDHSQWLLPRKLACSLIMFMAI*NRQLWP
Trigger: CGGCCAGAGCTGCCTGTTCAAAATCGCCATGAACAT...AATCAAGGAACAAGCCAGTTTCCTAGGAAGTAACCATTGCGAGTGGTCTAAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR TCA 72 bp GCAGTCCCTTTTCAGCCACCACTGTTGACATACATTTaGAGGACACAGCACCAAAAGAGTGATGTTCTAGGG +
Preference number: 3 (lower is better)
Translates to: AVPFQPPLLTYI*RTQHQKSDVLG
Trigger: CCCTAGAACATCACTCTTTTGGTGCTGTGTCCTTCAAATGTATGTCAACAGTGGTGGCTGAAAAGGGACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR TCA 72 bp ATATTCATTCAAAGAAGGCTGTGGATATCTCCTCAATaGACATGGATTCAAAGGCCGAGCTGGACCCTCCCC +
Preference number: 3 (lower is better)
Translates to: IFIQRRLWISPQ*TWIQRPSWTLP
Trigger: GGGGAGGGTCCAGCTCGGCCTTTGAATCCATGTTCATTGAGGAGATATCCACAGCCTTCTTTGAATGAATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480911.6
ENST00000646676.2
3UTR GCA 72 bp TACCCTACAAAGACCATGGATCTTTGCCACTTCAGGTaGTGTGGCTCAAACCTCTTAAAGTCATCCCAGGAA +
Preference number: 3 (lower is better)
Translates to: YPTKTMDLCHFR*CGSNLLKSSQE
Trigger: TTCCTGGGATGACTTTAAGAGGTTTGAGCCACAGCACCTGAAGTGGCAAAGATCCATGGTCTTTGTAGGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2
ENST00000644369.2
ENST00000647327.2
3UTR CCA 72 bp AATGTACAATGTATGTCTGATTCACACCAGGGGAAGTaGCACAGTGCCCTTTCTGGGATCCCTACAAAGTCA +
Preference number: 3 (lower is better)
Translates to: NVQCMSDSHQGK*HSALSGIPTKS
Trigger: TGACTTTGTAGGGATCCCAGAAAGGGCACTGTGCCACTTCCCCTGGTGTGAATCAGACATACATTGTACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327702.12
ENST00000347598.9
ENST00000399603.6
ENST00000399641.6
ENST00000399655.6
ENST00000642375.2
ENST00000643038.2
ENST00000644235.2