Pregenerated sensors for C7ORF33 (Homo sapiens)
Ensembl gene IDs: ENSG00000170279Ensembl transcript IDs: ENST00000307003.3
Found 84 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATCTCTATCCAGGTCCTCTGGGGATCTTCGTCTCCCTTTAGAACCTaGTGGCTTGTCACTCCGTGGTCCTCTCCTGGGCCCCACACCAGT | + |
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Preference number: 1 (lower is better) Translates to: ISIQVLWGSSSPFRT*WLVTPWSSPGPHTS Trigger: ACTGGTGTGGGGCCCAGGAGAGGACCACGGAGTGACAAGCCACCAGGTTCTAAAGGGAGACGAAGATCCCCAGAGGACCTGGATAGAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000307003.3 |
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| 3UTR CCA 90 bp | CACACAGCAGACAATGGTCAGGGAAACATCTCTATCCAGGTCCTCTaGGGATCTTCGTCTCCCTTTAGAACCTGGTGGCTTGTCACTCCG | + |
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Preference number: 1 (lower is better) Translates to: HTADNGQGNISIQVL*GSSSPFRTWWLVTP Trigger: CGGAGTGACAAGCCACCAGGTTCTAAAGGGAGACGAAGATCCCCAGAGGACCTGGATAGAGATGTTTCCCTGACCATTGTCTGCTGTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307003.3 |
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| 3UTR CCA 90 bp | CAGTGCACAAATGCCACACAGATTCCTGCAGGTACACGTGGAACTTaGGCTCATGATCAAAGAGAATTCTCAGCCTGTCTGCTGGTGTTC | + |
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Preference number: 1 (lower is better) Translates to: QCTNATQIPAGTRGT*AHDQREFSACLLVF Trigger: GAACACCAGCAGACAGGCTGAGAATTCTCTTTGATCATGAGCCCAAGTTCCACGTGTACCTGCAGGAATCTGTGTGGCATTTGTGCACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307003.3 |
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| 3UTR CCA 90 bp | GTTGTAAACTCTAGAGTCTCATCATCGGGAGCACACAGCAGACAATaGTCAGGGAAACATCTCTATCCAGGTCCTCTGGGGATCTTCGTC | + |
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Preference number: 1 (lower is better) Translates to: VVNSRVSSSGAHSRQ*SGKHLYPGPLGIFV Trigger: GACGAAGATCCCCAGAGGACCTGGATAGAGATGTTTCCCTGACCATTGTCTGCTGTGTGCTCCCGATGATGAGACTCTAGAGTTTACAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307003.3 |
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| 3UTR TCA 90 bp | AAATGCCACACAGATTCCTGCAGGTACACGTGGAACTTGGGCTCATaGTCAAAGAGAATTCTCAGCCTGTCTGCTGGTGTTCAAAGTTCA | + |
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Preference number: 1 (lower is better) Translates to: KCHTDSCRYTWNLGS*SKRILSLSAGVQSS Trigger: TGAACTTTGAACACCAGCAGACAGGCTGAGAATTCTCTTTGATCATGAGCCCAAGTTCCACGTGTACCTGCAGGAATCTGTGTGGCATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307003.3 |
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| 3UTR GCA 90 bp | CACGTGGAACTTGGGCTCATGATCAAAGAGAATTCTCAGCCTGTCTaGTGGTGTTCAAAGTTCAGACTTCAGATTACCAAGTTTTCATCA | + |
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Preference number: 1 (lower is better) Translates to: HVELGLMIKENSQPV*WCSKFRLQITKFSS Trigger: TGATGAAAACTTGGTAATCTGAAGTCTGAACTTTGAACACCAGCAGACAGGCTGAGAATTCTCTTTGATCATGAGCCCAAGTTCCACGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307003.3 |
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| 3UTR-3UTR GCA 90 bp | ACAATGGTCAGGGAAACATCTCTATCCAGGTCCTCTGGGGATCTTCGTCTCCCTTGCCACACAGATTCCTaGAGGTACACGTGGAACTTG | + |
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Preference number: 2 (lower is better) Translates to: TMVRETSLSRSSGDLRLPCHTDS*RYTWNL Trigger: CAAGTTCCACGTGTACCTGCAGGAATCTGTGTGGCA...AGGGAGACGAAGATCCCCAGAGGACCTGGATAGAGATGTTTCCCTGACCATTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307003.3 |
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| 3UTR-3UTR TCA 90 bp | ATGGTCAGGGAAACATCTCTATCCAGGTCCTCTGGGGATCTTCGTCTCCCTTTATGGAACTTGGGCTCATaGTCAAAGAGAATTCTCAGC | + |
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Preference number: 2 (lower is better) Translates to: MVRETSLSRSSGDLRLPLWNLGS*SKRILS Trigger: GCTGAGAATTCTCTTTGATCATGAGCCCAAGTTCCA...TAAAGGGAGACGAAGATCCCCAGAGGACCTGGATAGAGATGTTTCCCTGACCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307003.3 |
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| 3UTR CCA 72 bp | TCTAGAGTCTCATCATCGGGAGCACACAGCAGACAATaGTCAGGGAAACATCTCTATCCAGGTCCTCTGGGG | + |
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Preference number: 3 (lower is better) Translates to: SRVSSSGAHSRQ*SGKHLYPGPLG Trigger: CCCCAGAGGACCTGGATAGAGATGTTTCCCTGACCATTGTCTGCTGTGTGCTCCCGATGATGAGACTCTAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307003.3 |
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| 3UTR TCA 72 bp | ACAGATTCCTGCAGGTACACGTGGAACTTGGGCTCATaGTCAAAGAGAATTCTCAGCCTGTCTGCTGGTGTT | + |
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Preference number: 3 (lower is better) Translates to: TDSCRYTWNLGS*SKRILSLSAGV Trigger: AACACCAGCAGACAGGCTGAGAATTCTCTTTGATCATGAGCCCAAGTTCCACGTGTACCTGCAGGAATCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307003.3 |
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| 3UTR CCA 72 bp | AATGCCACACAGATTCCTGCAGGTACACGTGGAACTTaGGCTCATGATCAAAGAGAATTCTCAGCCTGTCTG | + |
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Preference number: 3 (lower is better) Translates to: NATQIPAGTRGT*AHDQREFSACL Trigger: CAGACAGGCTGAGAATTCTCTTTGATCATGAGCCCAAGTTCCACGTGTACCTGCAGGAATCTGTGTGGCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307003.3 |
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| 3UTR GCA 72 bp | CTTGGGCTCATGATCAAAGAGAATTCTCAGCCTGTCTaGTGGTGTTCAAAGTTCAGACTTCAGATTACCAAG | + |
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Preference number: 3 (lower is better) Translates to: LGLMIKENSQPV*WCSKFRLQITK Trigger: CTTGGTAATCTGAAGTCTGAACTTTGAACACCAGCAGACAGGCTGAGAATTCTCTTTGATCATGAGCCCAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307003.3 |
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| CDS-3UTR CCA 90 bp | TCCTGGGCCCCACACCAGTGCACAAATGCCACACAGATTCCTGCAGGTACACGTTGGCTTGTCACTCCGTaGTCCTCTCCTGGGCCCCAC | + |
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Preference number: 4 (lower is better) Translates to: SWAPHQCTNATQIPAGTRWLVTP*SSPGPH Trigger: GTGGGGCCCAGGAGAGGACCACGGAGTGACAAGCCA...ACGTGTACCTGCAGGAATCTGTGTGGCATTTGTGCACTGGTGTGGGGCCCAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000307003.3 |
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| CDS-3UTR TCA 90 bp | CCAGTGCACAAATGCCACACAGATTCCTGCAGGTACACGTGGAACTTGGGCTCATGGGCGCCTCGCTCCTaGCCACTGGATTGGCATCAC | + |
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Preference number: 4 (lower is better) Translates to: PVHKCHTDSCRYTWNLGSWAPRS*PLDWHH Trigger: GTGATGCCAATCCAGTGGTCAGGAGCGAGGCGCCCA...TGAGCCCAAGTTCCACGTGTACCTGCAGGAATCTGTGTGGCATTTGTGCACTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307003.3 |
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| CDS-3UTR CCA 90 bp | CTCCTGGGCCCCACACCAGTGCACAAATGCCACACAGATTCCTGCAGGTACACGACGGGGCACCAGATTTaGTGGGAGCTGATACAGGAG | + |
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Preference number: 4 (lower is better) Translates to: LLGPTPVHKCHTDSCRYTTGHQI*WELIQE Trigger: CTCCTGTATCAGCTCCCACCAAATCTGGTGCCCCGT...CGTGTACCTGCAGGAATCTGTGTGGCATTTGTGCACTGGTGTGGGGCCCAGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000307003.3 |
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| CDS-3UTR GCA 90 bp | CAAATGCCACACAGATTCCTGCAGGTACACGTGGAACTTGGGCTCATGATCAAAGTCAATCCGGCGCCTTaGCCCACTGGGCAGGAGGGC | + |
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Preference number: 4 (lower is better) Translates to: QMPHRFLQVHVELGLMIKVNPAP*PTGQEG Trigger: GCCCTCCTGCCCAGTGGGGCAAGGCGCCGGATTGAC...TTTGATCATGAGCCCAAGTTCCACGTGTACCTGCAGGAATCTGTGTGGCATTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307003.3 |
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| CDS-3UTR CCA 90 bp | CCTGGGCCCCACACCAGTGCACAAATGCCACACAGATTCCTGCAGGTACACGTGGCTTCACATTCACATTaGGGGCCTGGAAGTCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: PGPHTSAQMPHRFLQVHVASHSH*GPGSLQ Trigger: CTGGAGACTTCCAGGCCCCCAATGTGAATGTGAAGC...CACGTGTACCTGCAGGAATCTGTGTGGCATTTGTGCACTGGTGTGGGGCCCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000307003.3 |
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| CDS-3UTR CCA 90 bp | TCCTGGGCCCCACACCAGTGCACAAATGCCACACAGATTCCTGCAGGTACACGTCCCTTTAGAACCTGGTaGCTTGTCACTCCGTGGTCC | + |
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Preference number: 4 (lower is better) Translates to: SWAPHQCTNATQIPAGTRPFRTW*LVTPWS Trigger: GGACCACGGAGTGACAAGCCACCAGGTTCTAAAGGG...ACGTGTACCTGCAGGAATCTGTGTGGCATTTGTGCACTGGTGTGGGGCCCAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307003.3 |
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| CDS-3UTR CCA 90 bp | CAAATGCCACACAGATTCCTGCAGGTACACGTGGAACTTGGGCTCATGATCAAAGGCGCCTTGCCCCACTaGGCAGGAGGGCTTCACATT | + |
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Preference number: 4 (lower is better) Translates to: QMPHRFLQVHVELGLMIKGALPH*AGGLHI Trigger: AATGTGAAGCCCTCCTGCCCAGTGGGGCAAGGCGCC...TTTGATCATGAGCCCAAGTTCCACGTGTACCTGCAGGAATCTGTGTGGCATTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307003.3 |
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| CDS-3UTR GCA 90 bp | ATGGTCAGGGAAACATCTCTATCCAGGTCCTCTGGGGATCTTCGTCTCCCTTTATGGCCTGATTCTGACTaGTCTCTGGGCATCCGTGGG | + |
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Preference number: 4 (lower is better) Translates to: MVRETSLSRSSGDLRLPLWPDSD*SLGIRG Trigger: CCCACGGATGCCCAGAGAGCAGTCAGAATCAGGCCA...TAAAGGGAGACGAAGATCCCCAGAGGACCTGGATAGAGATGTTTCCCTGACCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307003.3 |
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| CDS-3UTR CCA 90 bp | GGAACTTGGGCTCATGATCAAAGAGAATTCTCAGCCTGTCTGCTGGTGTTCAAAGGACCGCCCCTAACGTaGACCCAAACAGCGACTGCC | + |
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Preference number: 4 (lower is better) Translates to: GTWAHDQREFSACLLVFKGPPLT*TQTATA Trigger: GGCAGTCGCTGTTTGGGTCCACGTTAGGGGCGGTCC...TTTGAACACCAGCAGACAGGCTGAGAATTCTCTTTGATCATGAGCCCAAGTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307003.3 |
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| CDS-3UTR GCA 90 bp | ACAATGGTCAGGGAAACATCTCTATCCAGGTCCTCTGGGGATCTTCGTCTCCCTATTACCTTTCCTGGATaGTGTCAAGGAGAGCGGCGC | + |
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Preference number: 4 (lower is better) Translates to: TMVRETSLSRSSGDLRLPITFPG*CQGERR Trigger: GCGCCGCTCTCCTTGACAGCATCCAGGAAAGGTAAT...AGGGAGACGAAGATCCCCAGAGGACCTGGATAGAGATGTTTCCCTGACCATTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307003.3 |
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| CDS-3UTR GCA 90 bp | CTTGGGCTCATGATCAAAGAGAATTCTCAGCCTGTCTGCTGGTGTTCAAAGTTCGACCCAAACAGCGACTaGCCTCCCACTCAGGCGAAG | + |
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Preference number: 4 (lower is better) Translates to: LGLMIKENSQPVCWCSKFDPNSD*PPTQAK Trigger: CTTCGCCTGAGTGGGAGGGCAGTCGCTGTTTGGGTC...GAACTTTGAACACCAGCAGACAGGCTGAGAATTCTCTTTGATCATGAGCCCAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307003.3 |
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| CDS-3UTR GCA 90 bp | CCAGTGCACAAATGCCACACAGATTCCTGCAGGTACACGTGGAACTTGGGCTCATGCCACACAGATTCCTaGAGGTACACGTGGAACTTG | + |
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Preference number: 4 (lower is better) Translates to: PVHKCHTDSCRYTWNLGSCHTDS*RYTWNL Trigger: CAAGTTCCACGTGTACCTGCAGGAATCTGTGTGGCA...TGAGCCCAAGTTCCACGTGTACCTGCAGGAATCTGTGTGGCATTTGTGCACTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307003.3 |
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| CDS-3UTR CCA 90 bp | GCACAAATGCCACACAGATTCCTGCAGGTACACGTGGAACTTGGGCTCATGATCCTCGCTCCTGACCACTaGATTGGCATCACCATAAGT | + |
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Preference number: 4 (lower is better) Translates to: AQMPHRFLQVHVELGLMILAPDH*IGITIS Trigger: ACTTATGGTGATGCCAATCCAGTGGTCAGGAGCGAG...GATCATGAGCCCAAGTTCCACGTGTACCTGCAGGAATCTGTGTGGCATTTGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307003.3 |
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| CDS-3UTR CCA 90 bp | CCTGCAGGTACACGTGGAACTTGGGCTCATGATCAAAGAGAATTCTCAGCCTGTGGGCACCAGATTTGGTaGGAGCTGATACAGGAGCAA | + |
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Preference number: 4 (lower is better) Translates to: PAGTRGTWAHDQREFSACGHQIW*ELIQEQ Trigger: TTGCTCCTGTATCAGCTCCCACCAAATCTGGTGCCC...ACAGGCTGAGAATTCTCTTTGATCATGAGCCCAAGTTCCACGTGTACCTGCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307003.3 |
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| CDS-3UTR GCA 90 bp | CCTGCAGGTACACGTGGAACTTGGGCTCATGATCAAAGAGAATTCTCAGCCTGTAACTGGAAGACAAGGTaGCGACAACTGGATCTGAGG | + |
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Preference number: 4 (lower is better) Translates to: PAGTRGTWAHDQREFSACNWKTR*RQLDLR Trigger: CCTCAGATCCAGTTGTCGGCACCTTGTCTTCCAGTT...ACAGGCTGAGAATTCTCTTTGATCATGAGCCCAAGTTCCACGTGTACCTGCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307003.3 |
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| CDS-3UTR GCA 90 bp | ATGGTCAGGGAAACATCTCTATCCAGGTCCTCTGGGGATCTTCGTCTCCCTTTAACACCAGTGCACAAATaGCACACAGATTCCTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: MVRETSLSRSSGDLRLPLTPVHK*HTDSCR Trigger: CCTGCAGGAATCTGTGTGGCATTTGTGCACTGGTGT...TAAAGGGAGACGAAGATCCCCAGAGGACCTGGATAGAGATGTTTCCCTGACCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307003.3 |
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| CDS-3UTR CCA 90 bp | CCAGTGCACAAATGCCACACAGATTCCTGCAGGTACACGTGGAACTTGGGCTCAGGTACACGTGGAACTTaGGCTCATGATCAAAGAGAA | + |
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Preference number: 4 (lower is better) Translates to: PVHKCHTDSCRYTWNLGSGTRGT*AHDQRE Trigger: TTCTCTTTGATCATGAGCCCAAGTTCCACGTGTACC...TGAGCCCAAGTTCCACGTGTACCTGCAGGAATCTGTGTGGCATTTGTGCACTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307003.3 |
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| CDS-3UTR CCA 90 bp | TCTCAGCCTGTCTGCTGGTGTTCAAAGTTCAGACTTCAGATTACCAAGTTTTCAGCCCATCCTGGTGCCTaGCCTGATTCTGACTGCTCT | + |
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Preference number: 4 (lower is better) Translates to: SQPVCWCSKFRLQITKFSAHPGA*PDSDCS Trigger: AGAGCAGTCAGAATCAGGCCAGGCACCAGGATGGGC...TGAAAACTTGGTAATCTGAAGTCTGAACTTTGAACACCAGCAGACAGGCTGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307003.3 |
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| CDS-3UTR CCA 90 bp | CAAATGCCACACAGATTCCTGCAGGTACACGTGGAACTTGGGCTCATGATCAAATCTATCCAGGTCCTCTaGGGATCTTCGTCTCCCTTT | + |
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Preference number: 4 (lower is better) Translates to: QMPHRFLQVHVELGLMIKSIQVL*GSSSPF Trigger: AAAGGGAGACGAAGATCCCCAGAGGACCTGGATAGA...TTTGATCATGAGCCCAAGTTCCACGTGTACCTGCAGGAATCTGTGTGGCATTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307003.3 |
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| CDS-3UTR TCA 90 bp | GCCACACAGATTCCTGCAGGTACACGTGGAACTTGGGCTCATGATCAAAGAGAATCTTCCCGTGGCATATaGCAAGTTAAATTGACCTGG | + |
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Preference number: 4 (lower is better) Translates to: ATQIPAGTRGTWAHDQRESSRGI*QVKLTW Trigger: CCAGGTCAATTTAACTTGTCATATGCCACGGGAAGA...TTCTCTTTGATCATGAGCCCAAGTTCCACGTGTACCTGCAGGAATCTGTGTGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307003.3 |
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| CDS-3UTR TCA 90 bp | GCACAAATGCCACACAGATTCCTGCAGGTACACGTGGAACTTGGGCTCATGATCAGATTTGGTGGGAGCTaGTACAGGAGCAATAAATTC | + |
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Preference number: 4 (lower is better) Translates to: AQMPHRFLQVHVELGLMIRFGGS*YRSNKF Trigger: GAATTTATTGCTCCTGTATCAGCTCCCACCAAATCT...GATCATGAGCCCAAGTTCCACGTGTACCTGCAGGAATCTGTGTGGCATTTGTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307003.3 |
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| CDS-3UTR TCA 90 bp | CTCAGCCTGTCTGCTGGTGTTCAAAGTTCAGACTTCAGATTACCAAGTTTTCATGCATCCGTGGGACCTTaGGAAAGAAAATGCCACGGG | + |
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Preference number: 4 (lower is better) Translates to: LSLSAGVQSSDFRLPSFHASVGP*ERKCHG Trigger: CCCGTGGCATTTTCTTTCTCAAGGTCCCACGGATGC...ATGAAAACTTGGTAATCTGAAGTCTGAACTTTGAACACCAGCAGACAGGCTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000307003.3 |
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| CDS-3UTR TCA 90 bp | AGCCTGTCTGCTGGTGTTCAAAGTTCAGACTTCAGATTACCAAGTTTTCATCAAGCCGACAACTGGATCTaGGGACAAGCCCATCCTGGT | + |
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Preference number: 4 (lower is better) Translates to: SLSAGVQSSDFRLPSFHQADNWI*GQAHPG Trigger: ACCAGGATGGGCTTGTCCTCAGATCCAGTTGTCGGC...TTGATGAAAACTTGGTAATCTGAAGTCTGAACTTTGAACACCAGCAGACAGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307003.3 |
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| CDS-3UTR TCA 90 bp | TTCCTGCAGGTACACGTGGAACTTGGGCTCATGATCAAAGAGAATTCTCAGCCTTGGAACTTGGGCTCATaGTCAAAGAGAATTCTCAGC | + |
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Preference number: 4 (lower is better) Translates to: FLQVHVELGLMIKENSQPWNLGS*SKRILS Trigger: GCTGAGAATTCTCTTTGATCATGAGCCCAAGTTCCA...AGGCTGAGAATTCTCTTTGATCATGAGCCCAAGTTCCACGTGTACCTGCAGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307003.3 |
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| CDS-3UTR CCA 90 bp | AGCCTGTCTGCTGGTGTTCAAAGTTCAGACTTCAGATTACCAAGTTTTCATCAATTCACATTGGGGGCCTaGAAGTCTCCAGGGACACTC | + |
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Preference number: 4 (lower is better) Translates to: SLSAGVQSSDFRLPSFHQFTLGA*KSPGTL Trigger: GAGTGTCCCTGGAGACTTCCAGGCCCCCAATGTGAA...TTGATGAAAACTTGGTAATCTGAAGTCTGAACTTTGAACACCAGCAGACAGGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000307003.3 |
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| CDS-3UTR CCA 90 bp | CAAATGCCACACAGATTCCTGCAGGTACACGTGGAACTTGGGCTCATGATCAAAGTTTTGGTGTGGGTTTaGCTTCTTATGTCTTCCCGT | + |
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Preference number: 4 (lower is better) Translates to: QMPHRFLQVHVELGLMIKVLVWV*LLMSSR Trigger: ACGGGAAGACATAAGAAGCCAAACCCACACCAAAAC...TTTGATCATGAGCCCAAGTTCCACGTGTACCTGCAGGAATCTGTGTGGCATTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307003.3 |
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| CDS-3UTR CCA 90 bp | CTTGGGCTCATGATCAAAGAGAATTCTCAGCCTGTCTGCTGGTGTTCAAAGTTCCTCTCTGGGCATCCGTaGGACCTTGAGAAAGAAAAT | + |
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Preference number: 4 (lower is better) Translates to: LGLMIKENSQPVCWCSKFLSGHP*DLEKEN Trigger: ATTTTCTTTCTCAAGGTCCCACGGATGCCCAGAGAG...GAACTTTGAACACCAGCAGACAGGCTGAGAATTCTCTTTGATCATGAGCCCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307003.3 |
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| CDS-3UTR CCA 90 bp | CAAATGCCACACAGATTCCTGCAGGTACACGTGGAACTTGGGCTCATGATCAAAAACTGCTGTCAGTTCTaGAAATCCTTGTGGCCTCAA | + |
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Preference number: 4 (lower is better) Translates to: QMPHRFLQVHVELGLMIKNCCQF*KSLWPQ Trigger: TTGAGGCCACAAGGATTTCCAGAACTGACAGCAGTT...TTTGATCATGAGCCCAAGTTCCACGTGTACCTGCAGGAATCTGTGTGGCATTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000307003.3 |
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| CDS-3UTR CCA 90 bp | TCTCAGCCTGTCTGCTGGTGTTCAAAGTTCAGACTTCAGATTACCAAGTTTTCATCTCCCTTTAGAACCTaGTGGCTTGTCACTCCGTGG | + |
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Preference number: 4 (lower is better) Translates to: SQPVCWCSKFRLQITKFSSPFRT*WLVTPW Trigger: CCACGGAGTGACAAGCCACCAGGTTCTAAAGGGAGA...TGAAAACTTGGTAATCTGAAGTCTGAACTTTGAACACCAGCAGACAGGCTGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307003.3 |
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| CDS-3UTR GCA 90 bp | ATGGTCAGGGAAACATCTCTATCCAGGTCCTCTGGGGATCTTCGTCTCCCTTTAAGCTTTCTTACTTCATaGCCACGTACGTTTAGGTAT | + |
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Preference number: 4 (lower is better) Translates to: MVRETSLSRSSGDLRLPLSFLTS*PRTFRY Trigger: ATACCTAAACGTACGTGGGCATGAAGTAAGAAAGCT...TAAAGGGAGACGAAGATCCCCAGAGGACCTGGATAGAGATGTTTCCCTGACCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307003.3 |
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| CDS-3UTR CCA 90 bp | CTCAGCCTGTCTGCTGGTGTTCAAAGTTCAGACTTCAGATTACCAAGTTTTCATCAAGTTAAATTGACCTaGACCGCCCCTAACGTGGAC | + |
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Preference number: 4 (lower is better) Translates to: LSLSAGVQSSDFRLPSFHQVKLT*TAPNVD Trigger: GTCCACGTTAGGGGCGGTCCAGGTCAATTTAACTTG...ATGAAAACTTGGTAATCTGAAGTCTGAACTTTGAACACCAGCAGACAGGCTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000307003.3 |
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| CDS-3UTR CCA 90 bp | CCTGCAGGTACACGTGGAACTTGGGCTCATGATCAAAGAGAATTCTCAGCCTGTGTTCATGTTTTGGTGTaGGTTTGGCTTCTTATGTCT | + |
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Preference number: 4 (lower is better) Translates to: PAGTRGTWAHDQREFSACVHVLV*VWLLMS Trigger: AGACATAAGAAGCCAAACCCACACCAAAACATGAAC...ACAGGCTGAGAATTCTCTTTGATCATGAGCCCAAGTTCCACGTGTACCTGCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307003.3 |
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| CDS-3UTR CCA 90 bp | GGAACTTGGGCTCATGATCAAAGAGAATTCTCAGCCTGTCTGCTGGTGTTCAAAGCACACAGCAGACAATaGTCAGGGAAACATCTCTAT | + |
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Preference number: 4 (lower is better) Translates to: GTWAHDQREFSACLLVFKAHSRQ*SGKHLY Trigger: ATAGAGATGTTTCCCTGACCATTGTCTGCTGTGTGC...TTTGAACACCAGCAGACAGGCTGAGAATTCTCTTTGATCATGAGCCCAAGTTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307003.3 |
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| CDS-3UTR CCA 90 bp | CTCAGCCTGTCTGCTGGTGTTCAAAGTTCAGACTTCAGATTACCAAGTTTTCATGGTAATTACCTTTCCTaGATGCTGTCAAGGAGAGCG | + |
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Preference number: 4 (lower is better) Translates to: LSLSAGVQSSDFRLPSFHGNYLS*MLSRRA Trigger: CGCTCTCCTTGACAGCATCCAGGAAAGGTAATTACC...ATGAAAACTTGGTAATCTGAAGTCTGAACTTTGAACACCAGCAGACAGGCTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307003.3 |
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| CDS-3UTR CCA 90 bp | CTGTCTGCTGGTGTTCAAAGTTCAGACTTCAGATTACCAAGTTTTCATCAACTGGCAGATCTAGGTAACTaGAAGACAAGGTGCCGACAA | + |
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Preference number: 4 (lower is better) Translates to: LSAGVQSSDFRLPSFHQLADLGN*KTRCRQ Trigger: TTGTCGGCACCTTGTCTTCCAGTTACCTAGATCTGC...CAGTTGATGAAAACTTGGTAATCTGAAGTCTGAACTTTGAACACCAGCAGACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307003.3 |
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| CDS-3UTR CCA 90 bp | CTCAGCCTGTCTGCTGGTGTTCAAAGTTCAGACTTCAGATTACCAAGTTTTCATTTCTGGAAATCCTTGTaGCCTCAACAGAATTCTGGA | + |
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Preference number: 4 (lower is better) Translates to: LSLSAGVQSSDFRLPSFHFWKSL*PQQNSG Trigger: TCCAGAATTCTGTTGAGGCCACAAGGATTTCCAGAA...ATGAAAACTTGGTAATCTGAAGTCTGAACTTTGAACACCAGCAGACAGGCTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307003.3 |
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| CDS-3UTR TCA 90 bp | TGGTGTTCAAAGTTCAGACTTCAGATTACCAAGTTTTCATCAACTGTTATTTCCTATGACAAGTTAAATTaGCCTGGACCGCCCCTAACG | + |
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Preference number: 4 (lower is better) Translates to: WCSKFRLQITKFSSTVISYDKLN*PGPPLT Trigger: CGTTAGGGGCGGTCCAGGTCAATTTAACTTGTCATA...GGAAATAACAGTTGATGAAAACTTGGTAATCTGAAGTCTGAACTTTGAACACCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000307003.3 |
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| CDS-3UTR GCA 90 bp | CTCAGCCTGTCTGCTGGTGTTCAAAGTTCAGACTTCAGATTACCAAGTTTTCATTGCAAAATTCTTAACTaGTGTCAGTTCTGGAAATCC | + |
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Preference number: 4 (lower is better) Translates to: LSLSAGVQSSDFRLPSFHCKILN*CQFWKS Trigger: GGATTTCCAGAACTGACAGCAGTTAAGAATTTTGCA...ATGAAAACTTGGTAATCTGAAGTCTGAACTTTGAACACCAGCAGACAGGCTGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000307003.3 |
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| CDS-3UTR TCA 90 bp | AGCCTGTCTGCTGGTGTTCAAAGTTCAGACTTCAGATTACCAAGTTTTCATCAACATCGCGAGTTTTACTaGATGCATGTTTTACTTAGA | + |
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Preference number: 4 (lower is better) Translates to: SLSAGVQSSDFRLPSFHQHREFY*MHVLLR Trigger: TCTAAGTAAAACATGCATTCAGTAAAACTCGCGATG...TTGATGAAAACTTGGTAATCTGAAGTCTGAACTTTGAACACCAGCAGACAGGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000307003.3 |
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| CDS-3UTR CCA 90 bp | TGGTGTTCAAAGTTCAGACTTCAGATTACCAAGTTTTCATCAACTGTTATTTCCGCCTCAACAGAATTCTaGAGCTTTCTTACTTCATGC | + |
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Preference number: 4 (lower is better) Translates to: WCSKFRLQITKFSSTVISASTEF*SFLTSC Trigger: GCATGAAGTAAGAAAGCTCCAGAATTCTGTTGAGGC...GGAAATAACAGTTGATGAAAACTTGGTAATCTGAAGTCTGAACTTTGAACACCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307003.3 |
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| CDS GCA 90 bp | AACAGCGACTGCCCTCCCACTCAGGCGAAGGTCAATCCGGCGCCTTaGCCCACTGGGCAGGAGGGCTTCACATTCACATTGGGGGCCTGG | + |
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Preference number: 5 (lower is better) Translates to: NSDCPPTQAKVNPAP*PTGQEGFTFTLGAW Trigger: CCAGGCCCCCAATGTGAATGTGAAGCCCTCCTGCCCAGTGGGGCAAGGCGCCGGATTGACCTTCGCCTGAGTGGGAGGGCAGTCGCTGTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000307003.3 |
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| CDS CCA 90 bp | CTGCCCTCCCACTCAGGCGAAGGTCAATCCGGCGCCTTGCCCCACTaGGCAGGAGGGCTTCACATTCACATTGGGGGCCTGGAAGTCTCC | + |
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Preference number: 5 (lower is better) Translates to: LPSHSGEGQSGALPH*AGGLHIHIGGLEVS Trigger: GGAGACTTCCAGGCCCCCAATGTGAATGTGAAGCCCTCCTGCCCAGTGGGGCAAGGCGCCGGATTGACCTTCGCCTGAGTGGGAGGGCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000307003.3 |
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| CDS GCA 90 bp | GTTAAATTGACCTGGACCGCCCCTAACGTGGACCCAAACAGCGACTaGCCTCCCACTCAGGCGAAGGTCAATCCGGCGCCTTGCCCCACT | + |
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Preference number: 5 (lower is better) Translates to: VKLTWTAPNVDPNSD*PPTQAKVNPAPCPT Trigger: AGTGGGGCAAGGCGCCGGATTGACCTTCGCCTGAGTGGGAGGGCAGTCGCTGTTTGGGTCCACGTTAGGGGCGGTCCAGGTCAATTTAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000307003.3 |
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| CDS CCA 90 bp | CCTTGCCCCACTGGGCAGGAGGGCTTCACATTCACATTGGGGGCCTaGAAGTCTCCAGGGACACTCTTCAAGGCTGAGGCTTTGAACTTC | + |
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Preference number: 5 (lower is better) Translates to: PCPTGQEGFTFTLGA*KSPGTLFKAEALNF Trigger: GAAGTTCAAAGCCTCAGCCTTGAAGAGTGTCCCTGGAGACTTCCAGGCCCCCAATGTGAATGTGAAGCCCTCCTGCCCAGTGGGGCAAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000307003.3 |
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| CDS TCA 90 bp | GTGCCTGGCCTGATTCTGACTGCTCTCTGGGCATCCGTGGGACCTTaGGAAAGAAAATGCCACGGGGCACCAGATTTGGTGGGAGCTGAT | + |
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Preference number: 5 (lower is better) Translates to: VPGLILTALWASVGP*ERKCHGAPDLVGAD Trigger: ATCAGCTCCCACCAAATCTGGTGCCCCGTGGCATTTTCTTTCTCAAGGTCCCACGGATGCCCAGAGAGCAGTCAGAATCAGGCCAGGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000307003.3 |
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| CDS TCA 90 bp | GGGTTTGGCTTCTTATGTCTTCCCGTGGCATATGACAAGTTAAATTaGCCTGGACCGCCCCTAACGTGGACCCAAACAGCGACTGCCCTC | + |
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Preference number: 5 (lower is better) Translates to: GFGFLCLPVAYDKLN*PGPPLTWTQTATAL Trigger: GAGGGCAGTCGCTGTTTGGGTCCACGTTAGGGGCGGTCCAGGTCAATTTAACTTGTCATATGCCACGGGAAGACATAAGAAGCCAAACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307003.3 |
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| CDS GCA 90 bp | GCTTGTAAGAGAGAGTTAGCAGATCTAGGTAACTGGAAGACAAGGTaGCGACAACTGGATCTGAGGACAAGCCCATCCTGGTGCCTGGCC | + |
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Preference number: 5 (lower is better) Translates to: ACKRELADLGNWKTR*RQLDLRTSPSWCLA Trigger: GGCCAGGCACCAGGATGGGCTTGTCCTCAGATCCAGTTGTCGGCACCTTGTCTTCCAGTTACCTAGATCTGCTAACTCTCTCTTACAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307003.3 |
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| CDS-3UTR CAA 90 bp | CCTGCAGGTACACGTGGAACTTGGGCTCATGATCAAAGAGAATTCTCAGCCTGTCACGGGGCACCAGATTaGGTGGGAGCTGATACAGGA | + |
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Preference number: 5 (lower is better) Translates to: PAGTRGTWAHDQREFSACHGAPD*VGADTG Trigger: TCCTGTATCAGCTCCCACCAAATCTGGTGCCCCGTG...ACAGGCTGAGAATTCTCTTTGATCATGAGCCCAAGTTCCACGTGTACCTGCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307003.3 |
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| CDS-3UTR CAA 90 bp | ACAATGGTCAGGGAAACATCTCTATCCAGGTCCTCTGGGGATCTTCGTCTCCCTTTAGAACCTGGTGGCTaGTCACTCCGTGGTCCTCTC | + |
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Preference number: 5 (lower is better) Translates to: TMVRETSLSRSSGDLRLPLEPGG*SLRGPL Trigger: GAGAGGACCACGGAGTGACAAGCCACCAGGTTCTAA...AGGGAGACGAAGATCCCCAGAGGACCTGGATAGAGATGTTTCCCTGACCATTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307003.3 |
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| CDS CCA 90 bp | CTGTCCTCCCAGGCTTGTAAGAGAGAGTTAGCAGATCTAGGTAACTaGAAGACAAGGTGCCGACAACTGGATCTGAGGACAAGCCCATCC | + |
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Preference number: 5 (lower is better) Translates to: LSSQACKRELADLGN*KTRCRQLDLRTSPS Trigger: GGATGGGCTTGTCCTCAGATCCAGTTGTCGGCACCTTGTCTTCCAGTTACCTAGATCTGCTAACTCTCTCTTACAAGCCTGGGAGGACAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307003.3 |
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| CDS-3UTR CAA 90 bp | CTTGGGCTCATGATCAAAGAGAATTCTCAGCCTGTCTGCTGGTGTTCAAAGTTCGGCTTCACATTCACATaGGGGGCCTGGAAGTCTCCA | + |
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Preference number: 5 (lower is better) Translates to: LGLMIKENSQPVCWCSKFGFTFT*GAWKSP Trigger: TGGAGACTTCCAGGCCCCCAATGTGAATGTGAAGCC...GAACTTTGAACACCAGCAGACAGGCTGAGAATTCTCTTTGATCATGAGCCCAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000307003.3 |
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| CDS-3UTR CAA 90 bp | GCACAAATGCCACACAGATTCCTGCAGGTACACGTGGAACTTGGGCTCATGATCTGTTTTGGTGTGGGTTaGGCTTCTTATGTCTTCCCG | + |
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Preference number: 5 (lower is better) Translates to: AQMPHRFLQVHVELGLMICFGVG*ASYVFP Trigger: CGGGAAGACATAAGAAGCCAAACCCACACCAAAACA...GATCATGAGCCCAAGTTCCACGTGTACCTGCAGGAATCTGTGTGGCATTTGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307003.3 |
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| CDS-3UTR CAA 90 bp | GGAACTTGGGCTCATGATCAAAGAGAATTCTCAGCCTGTCTGCTGGTGTTCAAACGTTTAGGTATGAACTaGTCACTGTCCTCCCAGGCT | + |
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Preference number: 5 (lower is better) Translates to: GTWAHDQREFSACLLVFKRLGMN*SLSSQA Trigger: AGCCTGGGAGGACAGTGACAAGTTCATACCTAAACG...TTTGAACACCAGCAGACAGGCTGAGAATTCTCTTTGATCATGAGCCCAAGTTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307003.3 |
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| CDS-3UTR CAA 90 bp | ACAATGGTCAGGGAAACATCTCTATCCAGGTCCTCTGGGGATCTTCGTCTCCCTGCTTTGAACTTCCACTaGCATTTTGGCAAAGGTAAT | + |
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Preference number: 5 (lower is better) Translates to: TMVRETSLSRSSGDLRLPALNFH*HFGKGN Trigger: ATTACCTTTGCCAAAATGCAAGTGGAAGTTCAAAGC...AGGGAGACGAAGATCCCCAGAGGACCTGGATAGAGATGTTTCCCTGACCATTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000307003.3 |
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| CDS-3UTR CAA 90 bp | CCTGCAGGTACACGTGGAACTTGGGCTCATGATCAAAGAGAATTCTCAGCCTGTTTCAAGGCTGAGGCTTaGAACTTCCACTTGCATTTT | + |
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Preference number: 5 (lower is better) Translates to: PAGTRGTWAHDQREFSACFKAEA*NFHLHF Trigger: AAAATGCAAGTGGAAGTTCAAAGCCTCAGCCTTGAA...ACAGGCTGAGAATTCTCTTTGATCATGAGCCCAAGTTCCACGTGTACCTGCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307003.3 |
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| CDS-3UTR CAA 90 bp | AGCCTGTCTGCTGGTGTTCAAAGTTCAGACTTCAGATTACCAAGTTTTCATCAACCCCCGGTTCATGTTTaGGTGTGGGTTTGGCTTCTT | + |
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Preference number: 5 (lower is better) Translates to: SLSAGVQSSDFRLPSFHQPPVHV*VWVWLL Trigger: AAGAAGCCAAACCCACACCAAAACATGAACCGGGGG...TTGATGAAAACTTGGTAATCTGAAGTCTGAACTTTGAACACCAGCAGACAGGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000307003.3 |
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| CDS-3UTR CAA 90 bp | CTCAGCCTGTCTGCTGGTGTTCAAAGTTCAGACTTCAGATTACCAAGTTTTCATCAGTTCTGGAAATCCTaGTGGCCTCAACAGAATTCT | + |
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Preference number: 5 (lower is better) Translates to: LSLSAGVQSSDFRLPSFHQFWKS*WPQQNS Trigger: AGAATTCTGTTGAGGCCACAAGGATTTCCAGAACTG...ATGAAAACTTGGTAATCTGAAGTCTGAACTTTGAACACCAGCAGACAGGCTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307003.3 |
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| CDS CCA 90 bp | AGATTCTGCAAAATTCTTAACTGCTGTCAGTTCTGGAAATCCTTGTaGCCTCAACAGAATTCTGGAGCTTTCTTACTTCATGCCCACGTA | + |
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Preference number: 5 (lower is better) Translates to: RFCKILNCCQFWKSL*PQQNSGAFLLHAHV Trigger: TACGTGGGCATGAAGTAAGAAAGCTCCAGAATTCTGTTGAGGCCACAAGGATTTCCAGAACTGACAGCAGTTAAGAATTTTGCAGAATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307003.3 |
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| CDS GCA 72 bp | ACCTGGACCGCCCCTAACGTGGACCCAAACAGCGACTaGCCTCCCACTCAGGCGAAGGTCAATCCGGCGCCT | + |
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Preference number: 6 (lower is better) Translates to: TWTAPNVDPNSD*PPTQAKVNPAP Trigger: AGGCGCCGGATTGACCTTCGCCTGAGTGGGAGGGCAGTCGCTGTTTGGGTCCACGTTAGGGGCGGTCCAGGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307003.3 |
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| CDS CCA 72 bp | CACTCAGGCGAAGGTCAATCCGGCGCCTTGCCCCACTaGGCAGGAGGGCTTCACATTCACATTGGGGGCCTG | + |
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Preference number: 6 (lower is better) Translates to: HSGEGQSGALPH*AGGLHIHIGGL Trigger: CAGGCCCCCAATGTGAATGTGAAGCCCTCCTGCCCAGTGGGGCAAGGCGCCGGATTGACCTTCGCCTGAGTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000307003.3 |
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| CDS CAA 90 bp | AAACAGCGACTGCCCTCCCACTCAGGCGAAGGTCAATCCGGCGCCTaGCCCCACTGGGCAGGAGGGCTTCACATTCACATTGGGGGCCTG | + |
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Preference number: 6 (lower is better) Translates to: KQRLPSHSGEGQSGA*PHWAGGLHIHIGGL Trigger: CAGGCCCCCAATGTGAATGTGAAGCCCTCCTGCCCAGTGGGGCAAGGCGCCGGATTGACCTTCGCCTGAGTGGGAGGGCAGTCGCTGTTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000307003.3 |
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| CDS GCA 72 bp | TGCCCTCCCACTCAGGCGAAGGTCAATCCGGCGCCTTaGCCCACTGGGCAGGAGGGCTTCACATTCACATTG | + |
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Preference number: 6 (lower is better) Translates to: CPPTQAKVNPAP*PTGQEGFTFTL Trigger: CAATGTGAATGTGAAGCCCTCCTGCCCAGTGGGGCAAGGCGCCGGATTGACCTTCGCCTGAGTGGGAGGGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307003.3 |
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| CDS CAA 90 bp | AATCCGGCGCCTTGCCCCACTGGGCAGGAGGGCTTCACATTCACATaGGGGGCCTGGAAGTCTCCAGGGACACTCTTCAAGGCTGAGGCT | + |
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Preference number: 6 (lower is better) Translates to: NPAPCPTGQEGFTFT*GAWKSPGTLFKAEA Trigger: AGCCTCAGCCTTGAAGAGTGTCCCTGGAGACTTCCAGGCCCCCAATGTGAATGTGAAGCCCTCCTGCCCAGTGGGGCAAGGCGCCGGATT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000307003.3 |
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| CDS CCA 72 bp | ACTGGGCAGGAGGGCTTCACATTCACATTGGGGGCCTaGAAGTCTCCAGGGACACTCTTCAAGGCTGAGGCT | + |
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Preference number: 6 (lower is better) Translates to: TGQEGFTFTLGA*KSPGTLFKAEA Trigger: AGCCTCAGCCTTGAAGAGTGTCCCTGGAGACTTCCAGGCCCCCAATGTGAATGTGAAGCCCTCCTGCCCAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000307003.3 |
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| CDS GCA 72 bp | GGACAAGCCCATCCTGGTGCCTGGCCTGATTCTGACTaGTCTCTGGGCATCCGTGGGACCTTGAGAAAGAAA | + |
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Preference number: 6 (lower is better) Translates to: GQAHPGAWPDSD*SLGIRGTLRKK Trigger: TTTCTTTCTCAAGGTCCCACGGATGCCCAGAGAGCAGTCAGAATCAGGCCAGGCACCAGGATGGGCTTGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307003.3 |
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| CDS TCA 72 bp | CTGATTCTGACTGCTCTCTGGGCATCCGTGGGACCTTaGGAAAGAAAATGCCACGGGGCACCAGATTTGGTG | + |
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Preference number: 6 (lower is better) Translates to: LILTALWASVGP*ERKCHGAPDLV Trigger: CACCAAATCTGGTGCCCCGTGGCATTTTCTTTCTCAAGGTCCCACGGATGCCCAGAGAGCAGTCAGAATCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000307003.3 |
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| CDS GCA 72 bp | AGAGAGTTAGCAGATCTAGGTAACTGGAAGACAAGGTaGCGACAACTGGATCTGAGGACAAGCCCATCCTGG | + |
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Preference number: 6 (lower is better) Translates to: RELADLGNWKTR*RQLDLRTSPSW Trigger: CCAGGATGGGCTTGTCCTCAGATCCAGTTGTCGGCACCTTGTCTTCCAGTTACCTAGATCTGCTAACTCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307003.3 |
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| CDS TCA 72 bp | TTCTTATGTCTTCCCGTGGCATATGACAAGTTAAATTaGCCTGGACCGCCCCTAACGTGGACCCAAACAGCG | + |
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Preference number: 6 (lower is better) Translates to: FLCLPVAYDKLN*PGPPLTWTQTA Trigger: CGCTGTTTGGGTCCACGTTAGGGGCGGTCCAGGTCAATTTAACTTGTCATATGCCACGGGAAGACATAAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307003.3 |
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| CDS TCA 72 bp | GTGTGGGTTTGGCTTCTTATGTCTTCCCGTGGCATATaGCAAGTTAAATTGACCTGGACCGCCCCTAACGTG | + |
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Preference number: 6 (lower is better) Translates to: VWVWLLMSSRGI*QVKLTWTAPNV Trigger: CACGTTAGGGGCGGTCCAGGTCAATTTAACTTGTCATATGCCACGGGAAGACATAAGAAGCCAAACCCACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307003.3 |
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| CDS CCA 72 bp | CAGGCTTGTAAGAGAGAGTTAGCAGATCTAGGTAACTaGAAGACAAGGTGCCGACAACTGGATCTGAGGACA | + |
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Preference number: 6 (lower is better) Translates to: QACKRELADLGN*KTRCRQLDLRT Trigger: TGTCCTCAGATCCAGTTGTCGGCACCTTGTCTTCCAGTTACCTAGATCTGCTAACTCTCTCTTACAAGCCTG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307003.3 |
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| CDS CAA 72 bp | TGGAAGTCTCCAGGGACACTCTTCAAGGCTGAGGCTTaGAACTTCCACTTGCATTTTGGCAAAGGTAATTAC | + |
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Preference number: 6 (lower is better) Translates to: WKSPGTLFKAEA*NFHLHFGKGNY Trigger: GTAATTACCTTTGCCAAAATGCAAGTGGAAGTTCAAAGCCTCAGCCTTGAAGAGTGTCCCTGGAGACTTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307003.3 |
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| CDS CCA 72 bp | AAAATTCTTAACTGCTGTCAGTTCTGGAAATCCTTGTaGCCTCAACAGAATTCTGGAGCTTTCTTACTTCAT | + |
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Preference number: 6 (lower is better) Translates to: KILNCCQFWKSL*PQQNSGAFLLH Trigger: ATGAAGTAAGAAAGCTCCAGAATTCTGTTGAGGCCACAAGGATTTCCAGAACTGACAGCAGTTAAGAATTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307003.3 |
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