Pregenerated sensors for C2ORF66 (Homo sapiens)
Ensembl gene IDs: ENSG00000187944Ensembl transcript IDs: ENST00000342506.4
Found 40 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCTCGGGCATTGCTAGAATATTTGATGTGGCACAATGTCCACCTCTaGATACTCTGGCAAAGAGCATCTTTGGAGGCGTTGACAACTTCT | + |
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Preference number: 1 (lower is better) Translates to: ARALLEYLMWHNVHL*ILWQRASLEALTTS Trigger: AGAAGTTGTCAACGCCTCCAAAGATGCTCTTTGCCAGAGTATTCAGAGGTGGACATTGTGCCACATCAAATATTCTAGCAATGCCCGAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000342506.4 |
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| 3UTR TCA 90 bp | AGCAGCTATTCCAAATGTGAGTATGGGAATCAGAATAACTCAGCATaGGCTAGAGTAAGGAGAGCAGGGGCTGGTTGGAAAGAGAGGAAA | + |
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Preference number: 1 (lower is better) Translates to: SSYSKCEYGNQNNSA*ARVRRAGAGWKERK Trigger: TTTCCTCTCTTTCCAACCAGCCCCTGCTCTCCTTACTCTAGCTCATGCTGAGTTATTCTGATTCCCATACTCACATTTGGAATAGCTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342506.4 |
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| 3UTR-3UTR TCA 90 bp | TTTCTACTTTTCCTTCCTGAGGAGGTTGTGTATGAGAGCAAGGGCTCGGGCATTTTTGGTAGTGTATGCTaGACATGGGAATGCATCTTC | + |
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Preference number: 2 (lower is better) Translates to: FLLFLPEEVVYESKGSGIFGSVC*TWECIF Trigger: GAAGATGCATTCCCATGTTCAGCATACACTACCAAA...AATGCCCGAGCCCTTGCTCTCATACACAACCTCCTCAGGAAGGAAAAGTAGAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000342506.4 |
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| 3UTR-3UTR TCA 90 bp | TTTCTACTTTTCCTTCCTGAGGAGGTTGTGTATGAGAGCAAGGGCTCGGGCATTGGGAAAGAAACTCCATaGAAGTTTAGCTATGACAAT | + |
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Preference number: 2 (lower is better) Translates to: FLLFLPEEVVYESKGSGIGKETP*KFSYDN Trigger: ATTGTCATAGCTAAACTTTCATGGAGTTTCTTTCCC...AATGCCCGAGCCCTTGCTCTCATACACAACCTCCTCAGGAAGGAAAAGTAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342506.4 |
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| 3UTR-3UTR CAA 90 bp | ACCTGTTTCTACTTTTCCTTCCTGAGGAGGTTGTGTATGAGAGCAAGGGCTCGGTGGCAAAGAGCATCTTaGGAGGCGTTGACAACTTCT | + |
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Preference number: 3 (lower is better) Translates to: TCFYFSFLRRLCMRARARWQRAS*EALTTS Trigger: AGAAGTTGTCAACGCCTCCAAAGATGCTCTTTGCCA...CCGAGCCCTTGCTCTCATACACAACCTCCTCAGGAAGGAAAAGTAGAAACAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342506.4 |
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| 3UTR TCA 72 bp | TCCAAATGTGAGTATGGGAATCAGAATAACTCAGCATaGGCTAGAGTAAGGAGAGCAGGGGCTGGTTGGAAA | + |
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Preference number: 3 (lower is better) Translates to: SKCEYGNQNNSA*ARVRRAGAGWK Trigger: TTTCCAACCAGCCCCTGCTCTCCTTACTCTAGCTCATGCTGAGTTATTCTGATTCCCATACTCACATTTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342506.4 |
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| 3UTR-3UTR CAA 90 bp | GAGGAGGTTGTGTATGAGAGCAAGGGCTCGGGCATTGCTAGAATATTTGATGTGGTGGCTGTTTATCACTaGCCCTCATTTCTTATGAAA | + |
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Preference number: 3 (lower is better) Translates to: EEVVYESKGSGIARIFDVVAVYH*PSFLMK Trigger: TTTCATAAGAAATGAGGGCAAGTGATAAACAGCCAC...CACATCAAATATTCTAGCAATGCCCGAGCCCTTGCTCTCATACACAACCTCCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000342506.4 |
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| 3UTR-3UTR CAA 90 bp | GAGGAGGTTGTGTATGAGAGCAAGGGCTCGGGCATTGCTAGAATATTTGATGTGTCTAGAATCCCATGTTaGTTGTTGTTGTTTGCTTCC | + |
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Preference number: 3 (lower is better) Translates to: EEVVYESKGSGIARIFDVSRIPC*LLLFAS Trigger: GGAAGCAAACAACAACAACAAACATGGGATTCTAGA...CACATCAAATATTCTAGCAATGCCCGAGCCCTTGCTCTCATACACAACCTCCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000342506.4 |
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| 3UTR TCA 72 bp | TCTGAATACTCTGGCAAAGAGCATCTTTGGAGGCGTTaGCAACTTCTAGAATCCCATGTTTGTTGTTGTTGT | + |
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Preference number: 3 (lower is better) Translates to: SEYSGKEHLWRR*QLLESHVCCCC Trigger: ACAACAACAACAAACATGGGATTCTAGAAGTTGTCAACGCCTCCAAAGATGCTCTTTGCCAGAGTATTCAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000342506.4 |
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| CDS-3UTR GCA 90 bp | TTTCTACTTTTCCTTCCTGAGGAGGTTGTGTATGAGAGCAAGGGCTCGGGCATTGTGGCTCCATTCACATaGCCAAGCAGCACCAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: FLLFLPEEVVYESKGSGIVAPFT*PSSTRA Trigger: TGCCCTGGTGCTGCTTGGGCATGTGAATGGAGCCAC...AATGCCCGAGCCCTTGCTCTCATACACAACCTCCTCAGGAAGGAAAAGTAGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342506.4 |
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| 3UTR CAA 72 bp | CTGAGGAGGTTGTGTATGAGAGCAAGGGCTCGGGCATaGCTAGAATATTTGATGTGGCACAATGTCCACCTC | + |
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Preference number: 4 (lower is better) Translates to: LRRLCMRARARA*LEYLMWHNVHL Trigger: GAGGTGGACATTGTGCCACATCAAATATTCTAGCAATGCCCGAGCCCTTGCTCTCATACACAACCTCCTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000342506.4 |
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| CDS-3UTR TCA 90 bp | ACCTGTTTCTACTTTTCCTTCCTGAGGAGGTTGTGTATGAGAGCAAGGGCTCGGCACAATGTCCACCTCTaGATACTCTGGCAAAGAGCA | + |
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Preference number: 4 (lower is better) Translates to: TCFYFSFLRRLCMRARARHNVHL*ILWQRA Trigger: TGCTCTTTGCCAGAGTATTCAGAGGTGGACATTGTG...CCGAGCCCTTGCTCTCATACACAACCTCCTCAGGAAGGAAAAGTAGAAACAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342506.4 |
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| CDS-3UTR TCA 90 bp | ACCTGTTTCTACTTTTCCTTCCTGAGGAGGTTGTGTATGAGAGCAAGGGCTCGGCAGAATAACTCAGCATaGGCTAGAGTAAGGAGAGCA | + |
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Preference number: 4 (lower is better) Translates to: TCFYFSFLRRLCMRARARQNNSA*ARVRRA Trigger: TGCTCTCCTTACTCTAGCTCATGCTGAGTTATTCTG...CCGAGCCCTTGCTCTCATACACAACCTCCTCAGGAAGGAAAAGTAGAAACAGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342506.4 |
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| CDS-3UTR TCA 90 bp | GAGGAGGTTGTGTATGAGAGCAAGGGCTCGGGCATTGCTAGAATATTTGATGTGCATCTTTGGAGGCGTTaGCAACTTCTAGAATCCCAT | + |
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Preference number: 4 (lower is better) Translates to: EEVVYESKGSGIARIFDVHLWRR*QLLESH Trigger: ATGGGATTCTAGAAGTTGTCAACGCCTCCAAAGATG...CACATCAAATATTCTAGCAATGCCCGAGCCCTTGCTCTCATACACAACCTCCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000342506.4 |
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| CDS-3UTR GCA 90 bp | ACCTGTTTCTACTTTTCCTTCCTGAGGAGGTTGTGTATGAGAGCAAGGGCTCGGCTGCTCTTCATAATCTaGAGATGCAGAAGCAGTAAG | + |
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Preference number: 4 (lower is better) Translates to: TCFYFSFLRRLCMRARARLLFII*RCRSSK Trigger: CTTACTGCTTCTGCATCTGCAGATTATGAAGAGCAG...CCGAGCCCTTGCTCTCATACACAACCTCCTCAGGAAGGAAAAGTAGAAACAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342506.4 |
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| CDS-3UTR CCA 90 bp | TTTCTACTTTTCCTTCCTGAGGAGGTTGTGTATGAGAGCAAGGGCTCGGGCATTTCTGGGGTTGTTGAGTaGCTTCCATTTGTCCTCATT | + |
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Preference number: 4 (lower is better) Translates to: FLLFLPEEVVYESKGSGISGVVE*LPFVLI Trigger: AATGAGGACAAATGGAAGCCACTCAACAACCCCAGA...AATGCCCGAGCCCTTGCTCTCATACACAACCTCCTCAGGAAGGAAAAGTAGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000342506.4 |
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| CDS-3UTR TCA 90 bp | GAGGAGGTTGTGTATGAGAGCAAGGGCTCGGGCATTGCTAGAATATTTGATGTGGAAACTTTCAGCCTTTaGGATAATTGTGAAAGGAGT | + |
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Preference number: 4 (lower is better) Translates to: EEVVYESKGSGIARIFDVETFSL*DNCERS Trigger: ACTCCTTTCACAATTATCTCAAAGGCTGAAAGTTTC...CACATCAAATATTCTAGCAATGCCCGAGCCCTTGCTCTCATACACAACCTCCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000342506.4 |
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| CDS-3UTR GCA 90 bp | GAGGAGGTTGTGTATGAGAGCAAGGGCTCGGGCATTGCTAGAATATTTGATGTGTCTGCCCTTAAAATATaGCTGAAGCCTTCTGAAAAA | + |
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Preference number: 4 (lower is better) Translates to: EEVVYESKGSGIARIFDVSALKI*LKPSEK Trigger: TTTTTCAGAAGGCTTCAGGCATATTTTAAGGGCAGA...CACATCAAATATTCTAGCAATGCCCGAGCCCTTGCTCTCATACACAACCTCCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342506.4 |
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| CDS-3UTR GCA 90 bp | ACCTGTTTCTACTTTTCCTTCCTGAGGAGGTTGTGTATGAGAGCAAGGGCTCGGATGTTAGGACAATGTTaGATTTTAGTGCAACATTCC | + |
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Preference number: 4 (lower is better) Translates to: TCFYFSFLRRLCMRARARMLGQC*ILVQHS Trigger: GGAATGTTGCACTAAAATGCAACATTGTCCTAACAT...CCGAGCCCTTGCTCTCATACACAACCTCCTCAGGAAGGAAAAGTAGAAACAGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000342506.4 |
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| CDS-3UTR CCA 90 bp | CTTAATTGTGGCTGTTTATCACTTGCCCTCATTTCTTATGAAACTAAAACTGTGGCAGGAGAGGTGCTCTaGTCATGGTGGAGTGAAGCT | + |
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Preference number: 4 (lower is better) Translates to: LNCGCLSLALISYETKTVAGEVL*SWWSEA Trigger: AGCTTCACTCCACCATGACCAGAGCACCTCTCCTGC...CACAGTTTTAGTTTCATAAGAAATGAGGGCAAGTGATAAACAGCCACAATTAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342506.4 |
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| CDS-3UTR CCA 90 bp | AGAAGCTTCATCTGTAGTTTTAAAATAGCCAGACACCTGAGCTCAGAAGAAACTAGAGCAGGGGCTGGTTaGAAAGAGAGGAAATCACCT | + |
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Preference number: 4 (lower is better) Translates to: RSFICSFKIARHLSSEETRAGAG*KERKSP Trigger: AGGTGATTTCCTCTCTTTCCAACCAGCCCCTGCTCT...AGTTTCTTCTGAGCTCAGGTGTCTGGCTATTTTAAAACTACAGATGAAGCTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000342506.4 |
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| CDS-3UTR CCA 90 bp | CTTAATTGTGGCTGTTTATCACTTGCCCTCATTTCTTATGAAACTAAAACTGTGAAGGAGAGCAGGGGCTaGTTGGAAAGAGAGGAAATC | + |
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Preference number: 4 (lower is better) Translates to: LNCGCLSLALISYETKTVKESRG*LEREEI Trigger: GATTTCCTCTCTTTCCAACCAGCCCCTGCTCTCCTT...CACAGTTTTAGTTTCATAAGAAATGAGGGCAAGTGATAAACAGCCACAATTAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000342506.4 |
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| CDS-3UTR TCA 90 bp | AGAAGCTTCATCTGTAGTTTTAAAATAGCCAGACACCTGAGCTCAGAAGAAACTATGCCTGAAGCCTTCTaGAAAACAGATCTCTGTTTC | + |
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Preference number: 4 (lower is better) Translates to: RSFICSFKIARHLSSEETMPEAF*KTDLCF Trigger: GAAACAGAGATCTGTTTTTCAGAAGGCTTCAGGCAT...AGTTTCTTCTGAGCTCAGGTGTCTGGCTATTTTAAAACTACAGATGAAGCTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000342506.4 |
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| CDS-3UTR GCA 90 bp | AGAAGCTTCATCTGTAGTTTTAAAATAGCCAGACACCTGAGCTCAGAAGAAACTGTGCAACATTCCTTTTaGAGGAATCACAGAGAAGAT | + |
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Preference number: 4 (lower is better) Translates to: RSFICSFKIARHLSSEETVQHSF*RNHRED Trigger: ATCTTCTCTGTGATTCCTGCAAAAGGAATGTTGCAC...AGTTTCTTCTGAGCTCAGGTGTCTGGCTATTTTAAAACTACAGATGAAGCTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000342506.4 |
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| CDS-3UTR CCA 90 bp | CTTAATTGTGGCTGTTTATCACTTGCCCTCATTTCTTATGAAACTAAAACTGTGGCAGTAAGTTCTGACTaGAAAGAGAGAGGTCTAGGA | + |
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Preference number: 4 (lower is better) Translates to: LNCGCLSLALISYETKTVAVSSD*KERGLG Trigger: TCCTAGACCTCTCTCTTTCCAGTCAGAACTTACTGC...CACAGTTTTAGTTTCATAAGAAATGAGGGCAAGTGATAAACAGCCACAATTAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342506.4 |
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| CDS-3UTR TCA 90 bp | CTTAATTGTGGCTGTTTATCACTTGCCCTCATTTCTTATGAAACTAAAACTGTGTTTGGTAGTGTATGCTaGACATGGGAATGCATCTTC | + |
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Preference number: 4 (lower is better) Translates to: LNCGCLSLALISYETKTVFGSVC*TWECIF Trigger: GAAGATGCATTCCCATGTTCAGCATACACTACCAAA...CACAGTTTTAGTTTCATAAGAAATGAGGGCAAGTGATAAACAGCCACAATTAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342506.4 |
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| CDS-3UTR TCA 90 bp | CTTAATTGTGGCTGTTTATCACTTGCCCTCATTTCTTATGAAACTAAAACTGTGGGGAAAGAAACTCCATaGAAGTTTAGCTATGACAAT | + |
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Preference number: 4 (lower is better) Translates to: LNCGCLSLALISYETKTVGKETP*KFSYDN Trigger: ATTGTCATAGCTAAACTTTCATGGAGTTTCTTTCCC...CACAGTTTTAGTTTCATAAGAAATGAGGGCAAGTGATAAACAGCCACAATTAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000342506.4 |
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| CDS GCA 90 bp | AGTGGCTTCCATTTGTCCTCATTTCTTACTGTGGCTCCATTCACATaGCCAAGCAGCACCAGGGCAACACATAGTAGCAGGAGAGGTGCT | + |
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Preference number: 5 (lower is better) Translates to: SGFHLSSFLTVAPFT*PSSTRATHSSRRGA Trigger: AGCACCTCTCCTGCTACTATGTGTTGCCCTGGTGCTGCTTGGGCATGTGAATGGAGCCACAGTAAGAAATGAGGACAAATGGAAGCCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000342506.4 |
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| CDS-3UTR CAA 90 bp | GAGGAGGTTGTGTATGAGAGCAAGGGCTCGGGCATTGCTAGAATATTTGATGTGTCCTTCCTGAGGAGGTaGTGTATGAGAGCAAGGGCT | + |
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Preference number: 5 (lower is better) Translates to: EEVVYESKGSGIARIFDVSFLRR*CMRARA Trigger: AGCCCTTGCTCTCATACACAACCTCCTCAGGAAGGA...CACATCAAATATTCTAGCAATGCCCGAGCCCTTGCTCTCATACACAACCTCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000342506.4 |
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| CDS-3UTR CAA 90 bp | TTTCTACTTTTCCTTCCTGAGGAGGTTGTGTATGAGAGCAAGGGCTCGGGCATTGCAAGGGCTCGGGCATaGCTAGAATATTTGATGTGG | + |
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Preference number: 5 (lower is better) Translates to: FLLFLPEEVVYESKGSGIARARA*LEYLMW Trigger: CCACATCAAATATTCTAGCAATGCCCGAGCCCTTGC...AATGCCCGAGCCCTTGCTCTCATACACAACCTCCTCAGGAAGGAAAAGTAGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342506.4 |
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| CDS-3UTR CAA 90 bp | TTTCTACTTTTCCTTCCTGAGGAGGTTGTGTATGAGAGCAAGGGCTCGGGCATTTGGCAAAGAGCATCTTaGGAGGCGTTGACAACTTCT | + |
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Preference number: 5 (lower is better) Translates to: FLLFLPEEVVYESKGSGIWQRAS*EALTTS Trigger: AGAAGTTGTCAACGCCTCCAAAGATGCTCTTTGCCA...AATGCCCGAGCCCTTGCTCTCATACACAACCTCCTCAGGAAGGAAAAGTAGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342506.4 |
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| CDS-3UTR CAA 90 bp | ACCTGTTTCTACTTTTCCTTCCTGAGGAGGTTGTGTATGAGAGCAAGGGCTCGGTCTAGAATCCCATGTTaGTTGTTGTTGTTTGCTTCC | + |
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Preference number: 5 (lower is better) Translates to: TCFYFSFLRRLCMRARARSRIPC*LLLFAS Trigger: GGAAGCAAACAACAACAACAAACATGGGATTCTAGA...CCGAGCCCTTGCTCTCATACACAACCTCCTCAGGAAGGAAAAGTAGAAACAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342506.4 |
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| CDS CCA 90 bp | CTGAAGCCTTCTGAAAAACAGATCTCTGTTTCTGGGGTTGTTGAGTaGCTTCCATTTGTCCTCATTTCTTACTGTGGCTCCATTCACATG | + |
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Preference number: 5 (lower is better) Translates to: LKPSEKQISVSGVVE*LPFVLISYCGSIHM Trigger: CATGTGAATGGAGCCACAGTAAGAAATGAGGACAAATGGAAGCCACTCAACAACCCCAGAAACAGAGATCTGTTTTTCAGAAGGCTTCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000342506.4 |
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| CDS-3UTR CAA 90 bp | AGAAGCTTCATCTGTAGTTTTAAAATAGCCAGACACCTGAGCTCAGAAGAAACTGCATCTTTGGAGGCGTaGACAACTTCTAGAATCCCA | + |
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Preference number: 5 (lower is better) Translates to: RSFICSFKIARHLSSEETASLEA*TTSRIP Trigger: TGGGATTCTAGAAGTTGTCAACGCCTCCAAAGATGC...AGTTTCTTCTGAGCTCAGGTGTCTGGCTATTTTAAAACTACAGATGAAGCTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000342506.4 |
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| CDS-3UTR CAA 90 bp | CTTAATTGTGGCTGTTTATCACTTGCCCTCATTTCTTATGAAACTAAAACTGTGTCTCTGTTTCTGGGGTaGTTGAGTGGCTTCCATTTG | + |
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Preference number: 5 (lower is better) Translates to: LNCGCLSLALISYETKTVSLFLG*LSGFHL Trigger: CAAATGGAAGCCACTCAACAACCCCAGAAACAGAGA...CACAGTTTTAGTTTCATAAGAAATGAGGGCAAGTGATAAACAGCCACAATTAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000342506.4 |
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| CDS-3UTR CAA 90 bp | AGAAGCTTCATCTGTAGTTTTAAAATAGCCAGACACCTGAGCTCAGAAGAAACTGTGGCTGTTTATCACTaGCCCTCATTTCTTATGAAA | + |
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Preference number: 5 (lower is better) Translates to: RSFICSFKIARHLSSEETVAVYH*PSFLMK Trigger: TTTCATAAGAAATGAGGGCAAGTGATAAACAGCCAC...AGTTTCTTCTGAGCTCAGGTGTCTGGCTATTTTAAAACTACAGATGAAGCTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000342506.4 |
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| CDS-3UTR CAA 90 bp | CTTAATTGTGGCTGTTTATCACTTGCCCTCATTTCTTATGAAACTAAAACTGTGTTGAGTGGCTTCCATTaGTCCTCATTTCTTACTGTG | + |
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Preference number: 5 (lower is better) Translates to: LNCGCLSLALISYETKTVLSGFH*SSFLTV Trigger: CACAGTAAGAAATGAGGACAAATGGAAGCCACTCAA...CACAGTTTTAGTTTCATAAGAAATGAGGGCAAGTGATAAACAGCCACAATTAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342506.4 |
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| CDS-3UTR CAA 90 bp | CTTAATTGTGGCTGTTTATCACTTGCCCTCATTTCTTATGAAACTAAAACTGTGGCATTGCTAGAATATTaGATGTGGCACAATGTCCAC | + |
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Preference number: 5 (lower is better) Translates to: LNCGCLSLALISYETKTVALLEY*MWHNVH Trigger: GTGGACATTGTGCCACATCAAATATTCTAGCAATGC...CACAGTTTTAGTTTCATAAGAAATGAGGGCAAGTGATAAACAGCCACAATTAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342506.4 |
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| CDS-3UTR CAA 90 bp | CTTAATTGTGGCTGTTTATCACTTGCCCTCATTTCTTATGAAACTAAAACTGTGAGAATCCCATGTTTGTaGTTGTTGTTTGCTTCCATT | + |
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Preference number: 5 (lower is better) Translates to: LNCGCLSLALISYETKTVRIPCL*LLFASI Trigger: AATGGAAGCAAACAACAACAACAAACATGGGATTCT...CACAGTTTTAGTTTCATAAGAAATGAGGGCAAGTGATAAACAGCCACAATTAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342506.4 |
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| CDS GCA 72 bp | AAATGTTCCAAGATCAAGACCTCTGCCCTTAAAATATaGCTGAAGCCTTCTGAAAAACAGATCTCTGTTTCT | + |
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Preference number: 6 (lower is better) Translates to: KCSKIKTSALKI*LKPSEKQISVS Trigger: AGAAACAGAGATCTGTTTTTCAGAAGGCTTCAGGCATATTTTAAGGGCAGAGGTCTTGATCTTGGAACATTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000342506.4 |
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