Pregenerated sensors for C1QL3 (Homo sapiens)
Ensembl gene IDs: ENSG00000165985Ensembl transcript IDs: ENST00000298943.4, ENST00000619991.1
Found 78 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TATACACAACTGAGGTGCCCTGCCATTGGCATCCCCTGGGATCCTTaGTTCACTGACGTTAGCCATACGAATCCAGTGTTCAAACTCAGA | + |
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Preference number: 1 (lower is better) Translates to: YTQLRCPAIGIPWDP*FTDVSHTNPVFKLR Trigger: TCTGAGTTTGAACACTGGATTCGTATGGCTAACGTCAGTGAATCAAGGATCCCAGGGGATGCCAATGGCAGGGCACCTCAGTTGTGTATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298943.4 |
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| 3UTR GCA 90 bp | CTATATAGGACTTCATTCACATGGACACTAACGATAAGGAGTATTTaGTTTGGCGGTAGTGGATCACACATCTGCTTATCTTGCTTTGAT | + |
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Preference number: 1 (lower is better) Translates to: LYRTSFTWTLTIRSI*FGGSGSHICLSCFD Trigger: ATCAAAGCAAGATAAGCAGATGTGTGATCCACTACCGCCAAAGCAAATACTCCTTATCGTTAGTGTCCATGTGAATGAAGTCCTATATAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298943.4 |
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| 3UTR-3UTR GCA 90 bp | ACACTAACGATAAGGAGTATTTGCTTTGGCGGTAGTGGATCACACATCTGCTTAACAACTGAGGTGCCCTaGCATTGGCATCCCCTGGGA | + |
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Preference number: 2 (lower is better) Translates to: TLTIRSICFGGSGSHICLTTEVP*HWHPLG Trigger: TCCCAGGGGATGCCAATGGCAGGGCACCTCAGTTGT...TAAGCAGATGTGTGATCCACTACCGCCAAAGCAAATACTCCTTATCGTTAGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298943.4 |
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| 3UTR-3UTR GCA 90 bp | CTCACAAGAACCAAAGCTGACATATGGATAAAAGCAGCAAGATCACAGTACACCTATACACAACTGAGGTaGCCTGCCATTGGCATCCCC | + |
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Preference number: 2 (lower is better) Translates to: LTRTKADIWIKAARSQYTYTQLR*PAIGIP Trigger: GGGGATGCCAATGGCAGGGCACCTCAGTTGTGTATA...GGTGTACTGTGATCTTGCTGCTTTTATCCATATGTCAGCTTTGGTTCTTGTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298943.4 |
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| 3UTR-3UTR TCA 90 bp | CTCACAAGAACCAAAGCTGACATATGGATAAAAGCAGCAAGATCACAGTACACCATCCCCTGGGATCCTTaGTTCACTGACGTTAGCCAT | + |
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Preference number: 2 (lower is better) Translates to: LTRTKADIWIKAARSQYTIPWDP*FTDVSH Trigger: ATGGCTAACGTCAGTGAATCAAGGATCCCAGGGGAT...GGTGTACTGTGATCTTGCTGCTTTTATCCATATGTCAGCTTTGGTTCTTGTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000298943.4 |
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| 3UTR CAA 90 bp | AGGTCTAGCTCTAAGGTTAACAAGAGTACAAGGCAAACAATTTCTTaGGGGACAAGCAGCATTATTTCAATTAGACCTTCTCCTGCAGGG | + |
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Preference number: 2 (lower is better) Translates to: RSSSKVNKSTRQTIS*GTSSIISIRPSPAG Trigger: CCCTGCAGGAGAAGGTCTAATTGAAATAATGCTGCTTGTCCCCAAAGAAATTGTTTGCCTTGTACTCTTGTTAACCTTAGAGCTAGACCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298943.4 |
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| 3UTR-3UTR GCA 90 bp | AGGTTAAGGCTTGAAGTTGAATCATTCCCAGGTCTAGCTCTAAGGTTAACAAGAACGATAAGGAGTATTTaGTTTGGCGGTAGTGGATCA | + |
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Preference number: 2 (lower is better) Translates to: RLRLEVESFPGLALRLTRTIRSI*FGGSGS Trigger: TGATCCACTACCGCCAAAGCAAATACTCCTTATCGT...TCTTGTTAACCTTAGAGCTAGACCTGGGAATGATTCAACTTCAAGCCTTAACCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298943.4 |
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| 3UTR-3UTR TCA 90 bp | AGGTTAAGGCTTGAAGTTGAATCATTCCCAGGTCTAGCTCTAAGGTTAACAAGACATAATGTTTCTGAGTaGTACAGATGTGAGTCAGGT | + |
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Preference number: 2 (lower is better) Translates to: RLRLEVESFPGLALRLTRHNVSE*YRCESG Trigger: ACCTGACTCACATCTGTATCACTCAGAAACATTATG...TCTTGTTAACCTTAGAGCTAGACCTGGGAATGATTCAACTTCAAGCCTTAACCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298943.4 |
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| 3UTR-3UTR CCA 90 bp | GCAGGTAAACTCACAAGAACCAAAGCTGACATATGGATAAAAGCAGCAAGATCAAGGACTTCATTCACATaGACACTAACGATAAGGAGT | + |
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Preference number: 2 (lower is better) Translates to: AGKLTRTKADIWIKAARSRTSFT*TLTIRS Trigger: ACTCCTTATCGTTAGTGTCCATGTGAATGAAGTCCT...TGATCTTGCTGCTTTTATCCATATGTCAGCTTTGGTTCTTGTGAGTTTACCTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298943.4 |
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| 3UTR-3UTR TCA 90 bp | AAATGTGAAAAAGATCATAGGCTTGGGAATTCCCTCAAATCCAGAAAATTCCAGGAGTCAGGTAGCATTTaGTTTCCCCACATATACACA | + |
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Preference number: 2 (lower is better) Translates to: KCEKDHRLGNSLKSRKFQESGSI*FPHIYT Trigger: TGTGTATATGTGGGGAAATCAAATGCTACCTGACTC...CTGGAATTTTCTGGATTTGAGGGAATTCCCAAGCCTATGATCTTTTTCACATTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000298943.4 |
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| 3UTR-3UTR GCA 90 bp | CTCACAAGAACCAAAGCTGACATATGGATAAAAGCAGCAAGATCACAGTACACCAGTGGATCACACATCTaGTTATCTTGCTTTGATATT | + |
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Preference number: 2 (lower is better) Translates to: LTRTKADIWIKAARSQYTSGSHI*LSCFDI Trigger: AATATCAAAGCAAGATAAGCAGATGTGTGATCCACT...GGTGTACTGTGATCTTGCTGCTTTTATCCATATGTCAGCTTTGGTTCTTGTGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298943.4 |
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| 3UTR-3UTR CCA 90 bp | AGGTTAAGGCTTGAAGTTGAATCATTCCCAGGTCTAGCTCTAAGGTTAACAAGATCCCCACACTATGAATaGACTCCAAGTATCATAATA | + |
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Preference number: 2 (lower is better) Translates to: RLRLEVESFPGLALRLTRSPHYE*TPSIII Trigger: TATTATGATACTTGGAGTCCATTCATAGTGTGGGGA...TCTTGTTAACCTTAGAGCTAGACCTGGGAATGATTCAACTTCAAGCCTTAACCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298943.4 |
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| 3UTR-3UTR CCA 90 bp | AGGTTAAGGCTTGAAGTTGAATCATTCCCAGGTCTAGCTCTAAGGTTAACAAGAGGCAAACAATTTCTTTaGGGACAAGCAGCATTATTT | + |
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Preference number: 2 (lower is better) Translates to: RLRLEVESFPGLALRLTRGKQFL*GQAALF Trigger: AAATAATGCTGCTTGTCCCCAAAGAAATTGTTTGCC...TCTTGTTAACCTTAGAGCTAGACCTGGGAATGATTCAACTTCAAGCCTTAACCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298943.4 |
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| 3UTR TCA 72 bp | CTGAGGTGCCCTGCCATTGGCATCCCCTGGGATCCTTaGTTCACTGACGTTAGCCATACGAATCCAGTGTTC | + |
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Preference number: 3 (lower is better) Translates to: LRCPAIGIPWDP*FTDVSHTNPVF Trigger: GAACACTGGATTCGTATGGCTAACGTCAGTGAATCAAGGATCCCAGGGGATGCCAATGGCAGGGCACCTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298943.4 |
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| CDS-3UTR TCA 90 bp | AGGTTAAGGCTTGAAGTTGAATCATTCCCAGGTCTAGCTCTAAGGTTAACAAGACCAGCCGCCGCCTCCTaGGCTCGCCCGGGCAGCTCA | + |
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Preference number: 4 (lower is better) Translates to: RLRLEVESFPGLALRLTRPAAAS*ARPGSS Trigger: TGAGCTGCCCGGGCGAGCTCAGGAGGCGGCGGCTGG...TCTTGTTAACCTTAGAGCTAGACCTGGGAATGATTCAACTTCAAGCCTTAACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298943.4 |
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| CDS-3UTR TCA 90 bp | CTCACAAGAACCAAAGCTGACATATGGATAAAAGCAGCAAGATCACAGTACACCTGGGCAGGGACTGCATaGGGCCGCGGTCGGGCGTGG | + |
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Preference number: 4 (lower is better) Translates to: LTRTKADIWIKAARSQYTWAGTA*GRGRAW Trigger: CCACGCCCGACCGCGGCCTCATGCAGTCCCTGCCCA...GGTGTACTGTGATCTTGCTGCTTTTATCCATATGTCAGCTTTGGTTCTTGTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298943.4 |
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| CDS-3UTR CCA 90 bp | CTCACAAGAACCAAAGCTGACATATGGATAAAAGCAGCAAGATCACAGTACACCCGGTGCTGGGCGCCTTaGTGCCCCCGTAGGGGTCGC | + |
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Preference number: 4 (lower is better) Translates to: LTRTKADIWIKAARSQYTRCWAP*CPRRGR Trigger: GCGACCCCTACGGGGGCACCAAGGCGCCCAGCACCG...GGTGTACTGTGATCTTGCTGCTTTTATCCATATGTCAGCTTTGGTTCTTGTGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000298943.4 |
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| CDS-3UTR CCA 90 bp | CTCACAAGAACCAAAGCTGACATATGGATAAAAGCAGCAAGATCACAGTACACCGCGTGGCAGCGGTGCTaGGCGCCTTGGTGCCCCCGT | + |
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Preference number: 4 (lower is better) Translates to: LTRTKADIWIKAARSQYTAWQRC*APWCPR Trigger: ACGGGGGCACCAAGGCGCCCAGCACCGCTGCCACGC...GGTGTACTGTGATCTTGCTGCTTTTATCCATATGTCAGCTTTGGTTCTTGTGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000298943.4 |
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| CDS-3UTR TCA 90 bp | CTCACAAGAACCAAAGCTGACATATGGATAAAAGCAGCAAGATCACAGTACACCTGTAGGTGGCGGCGCTaGTGGCCCCGGCCGCGTTCA | + |
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Preference number: 4 (lower is better) Translates to: LTRTKADIWIKAARSQYTCRWRR*WPRPRS Trigger: TGAACGCGGCCGGGGCCATCAGCGCCGCCACCTACA...GGTGTACTGTGATCTTGCTGCTTTTATCCATATGTCAGCTTTGGTTCTTGTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000298943.4 |
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| CDS-3UTR GCA 90 bp | AGGTTAAGGCTTGAAGTTGAATCATTCCCAGGTCTAGCTCTAAGGTTAACAAGACAACTCCCCTGGGCGTaGGTGCGCCGGCCGCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: RLRLEVESFPGLALRLTRQLPWA*VRRPLL Trigger: CAGCAGCGGCCGGCGCACGCACGCCCAGGGGAGTTG...TCTTGTTAACCTTAGAGCTAGACCTGGGAATGATTCAACTTCAAGCCTTAACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298943.4 |
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| CDS-3UTR GCA 90 bp | CTCACAAGAACCAAAGCTGACATATGGATAAAAGCAGCAAGATCACAGTACACCTCAGGCGCCTCCTGCTaGCCACCAGCCGGCTCAGCG | + |
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Preference number: 4 (lower is better) Translates to: LTRTKADIWIKAARSQYTSGASC*PPAGSA Trigger: CGCTGAGCCGGCTGGTGGGCAGCAGGAGGCGCCTGA...GGTGTACTGTGATCTTGCTGCTTTTATCCATATGTCAGCTTTGGTTCTTGTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298943.4 |
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| CDS-3UTR CCA 90 bp | AGGTTAAGGCTTGAAGTTGAATCATTCCCAGGTCTAGCTCTAAGGTTAACAAGAGCTCCTTCGCACCTGTaGCTGCAGCCGGCGCCGGCG | + |
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Preference number: 4 (lower is better) Translates to: RLRLEVESFPGLALRLTRAPSHL*LQPAPA Trigger: CGCCGGCGCCGGCTGCAGCCACAGGTGCGAAGGAGC...TCTTGTTAACCTTAGAGCTAGACCTGGGAATGATTCAACTTCAAGCCTTAACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298943.4 |
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| CDS-3UTR CCA 90 bp | GCAGGTAAACTCACAAGAACCAAAGCTGACATATGGATAAAAGCAGCAAGATCAGAACCCCAACTCCCCTaGGCGTGCGTGCGCCGGCCG | + |
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Preference number: 4 (lower is better) Translates to: AGKLTRTKADIWIKAARSEPQLP*ACVRRP Trigger: CGGCCGGCGCACGCACGCCCAGGGGAGTTGGGGTTC...TGATCTTGCTGCTTTTATCCATATGTCAGCTTTGGTTCTTGTGAGTTTACCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000298943.4 |
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| CDS-3UTR TCA 90 bp | ACACTAACGATAAGGAGTATTTGCTTTGGCGGTAGTGGATCACACATCTGCTTAAGCGCGGGCGCCCAGTaGCTTGAGCCGAAGTCCCGA | + |
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Preference number: 4 (lower is better) Translates to: TLTIRSICFGGSGSHICLSAGAQ*LEPKSR Trigger: TCGGGACTTCGGCTCAAGTCACTGGGCGCCCGCGCT...TAAGCAGATGTGTGATCCACTACCGCCAAAGCAAATACTCCTTATCGTTAGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298943.4 |
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| CDS-3UTR GCA 90 bp | ACACTAACGATAAGGAGTATTTGCTTTGGCGGTAGTGGATCACACATCTGCTTACGTAGTGCGCCGACGTaGCGGCCGAGCTCACCAGCA | + |
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Preference number: 4 (lower is better) Translates to: TLTIRSICFGGSGSHICLRSAPT*RPSSPA Trigger: TGCTGGTGAGCTCGGCCGGCACGTCGGCGCACTACG...TAAGCAGATGTGTGATCCACTACCGCCAAAGCAAATACTCCTTATCGTTAGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298943.4 |
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| CDS-3UTR GCA 90 bp | AGGTTAAGGCTTGAAGTTGAATCATTCCCAGGTCTAGCTCTAAGGTTAACAAGACGATCAGGCGCCTCCTaGTGCCCACCAGCCGGCTCA | + |
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Preference number: 4 (lower is better) Translates to: RLRLEVESFPGLALRLTRRSGAS*CPPAGS Trigger: TGAGCCGGCTGGTGGGCAGCAGGAGGCGCCTGATCG...TCTTGTTAACCTTAGAGCTAGACCTGGGAATGATTCAACTTCAAGCCTTAACCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298943.4 |
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| CDS-3UTR GCA 90 bp | GCAGGTAAACTCACAAGAACCAAAGCTGACATATGGATAAAAGCAGCAAGATCATGCTGGGCGCCTTGGTaGCCCCGTAGGGGTCGCAGA | + |
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Preference number: 4 (lower is better) Translates to: AGKLTRTKADIWIKAARSCWAPW*PRRGRR Trigger: TCTGCGACCCCTACGGGGGCACCAAGGCGCCCAGCA...TGATCTTGCTGCTTTTATCCATATGTCAGCTTTGGTTCTTGTGAGTTTACCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000298943.4 |
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| CDS-3UTR GCA 90 bp | AGGTTAAGGCTTGAAGTTGAATCATTCCCAGGTCTAGCTCTAAGGTTAACAAGAAAGGTGGGCAGGGACTaGATGAGGCCGCGGTCGGGC | + |
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Preference number: 4 (lower is better) Translates to: RLRLEVESFPGLALRLTRKVGRD*MRPRSG Trigger: GCCCGACCGCGGCCTCATGCAGTCCCTGCCCACCTT...TCTTGTTAACCTTAGAGCTAGACCTGGGAATGATTCAACTTCAAGCCTTAACCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298943.4 |
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| CDS-3UTR TCA 90 bp | AAATGTGAAAAAGATCATAGGCTTGGGAATTCCCTCAAATCCAGAAAATTCCAGGGGCGCCCAGTGACTTaGGCCGAAGTCCCGAGCCCG | + |
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Preference number: 4 (lower is better) Translates to: KCEKDHRLGNSLKSRKFQGRPVT*AEVPSP Trigger: CGGGCTCGGGACTTCGGCTCAAGTCACTGGGCGCCC...CTGGAATTTTCTGGATTTGAGGGAATTCCCAAGCCTATGATCTTTTTCACATTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000298943.4 |
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| CDS-3UTR TCA 90 bp | CTCACAAGAACCAAAGCTGACATATGGATAAAAGCAGCAAGATCACAGTACACCCTTCATGCTGCCGCTTaGGGCCGGCGTAGAAGGCGA | + |
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Preference number: 4 (lower is better) Translates to: LTRTKADIWIKAARSQYTLHAAA*GRRRRR Trigger: TCGCCTTCTACGCCGGCCTCAAGCGGCAGCATGAAG...GGTGTACTGTGATCTTGCTGCTTTTATCCATATGTCAGCTTTGGTTCTTGTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298943.4 |
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| CDS-3UTR TCA 90 bp | GCAGGTAAACTCACAAGAACCAAAGCTGACATATGGATAAAAGCAGCAAGATCACCGGGATGGAGCAGGTaGACTTGCCGGTGGTGGGGT | + |
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Preference number: 4 (lower is better) Translates to: AGKLTRTKADIWIKAARSPGWSR*TCRWWG Trigger: ACCCCACCACCGGCAAGTTCACCTGCTCCATCCCGG...TGATCTTGCTGCTTTTATCCATATGTCAGCTTTGGTTCTTGTGAGTTTACCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000298943.4 |
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| CDS-3UTR GCA 90 bp | AGGTTAAGGCTTGAAGTTGAATCATTCCCAGGTCTAGCTCTAAGGTTAACAAGAAGAGATCAGCCCACATaGTGGTGCCGTCCCCTCCGC | + |
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Preference number: 4 (lower is better) Translates to: RLRLEVESFPGLALRLTRRDQPT*WCRPLR Trigger: GCGGAGGGGACGGCACCAGCATGTGGGCTGATCTCT...TCTTGTTAACCTTAGAGCTAGACCTGGGAATGATTCAACTTCAAGCCTTAACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298943.4 |
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| CDS-3UTR TCA 90 bp | ACACTAACGATAAGGAGTATTTGCTTTGGCGGTAGTGGATCACACATCTGCTTACCACGTCGTCGAACTTaGGCACCTCGTAGCCTTCAT | + |
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Preference number: 4 (lower is better) Translates to: TLTIRSICFGGSGSHICLPRRRT*APRSLH Trigger: ATGAAGGCTACGAGGTGCTCAAGTTCGACGACGTGG...TAAGCAGATGTGTGATCCACTACCGCCAAAGCAAATACTCCTTATCGTTAGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298943.4 |
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| CDS-3UTR GCA 90 bp | ACACTAACGATAAGGAGTATTTGCTTTGGCGGTAGTGGATCACACATCTGCTTACTGAAGGCAGAATTCTaGCTGGGTACCACCTGCCAG | + |
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Preference number: 4 (lower is better) Translates to: TLTIRSICFGGSGSHICLLKAEF*LGTTCQ Trigger: CTGGCAGGTGGTACCCAGGCAGAATTCTGCCTTCAG...TAAGCAGATGTGTGATCCACTACCGCCAAAGCAAATACTCCTTATCGTTAGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298943.4 |
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| CDS-3UTR CCA 90 bp | GCAGGTAAACTCACAAGAACCAAAGCTGACATATGGATAAAAGCAGCAAGATCACGTAGAAGGCGATCTTaGGCACCGTGCTGTAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: AGKLTRTKADIWIKAARSRRRRS*APCCRW Trigger: CCACCTACAGCACGGTGCCCAAGATCGCCTTCTACG...TGATCTTGCTGCTTTTATCCATATGTCAGCTTTGGTTCTTGTGAGTTTACCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298943.4 |
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| CDS-3UTR GCA 90 bp | GCAGGTAAACTCACAAGAACCAAAGCTGACATATGGATAAAAGCAGCAAGATCATATGCCGCCGCCGCCTaGGATCGACTTTTCCGTTTT | + |
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Preference number: 4 (lower is better) Translates to: AGKLTRTKADIWIKAARSYAAAA*DRLFRF Trigger: AAAACGGAAAAGTCGATCGCAGGCGGCGGCGGCATA...TGATCTTGCTGCTTTTATCCATATGTCAGCTTTGGTTCTTGTGAGTTTACCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000298943.4 |
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| CDS-3UTR GCA 90 bp | AAATGTGAAAAAGATCATAGGCTTGGGAATTCCCTCAAATCCAGAAAATTCCAGCAGCTCACACTTTTATaGCGCCGCCGCCTGCGATCG | + |
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Preference number: 4 (lower is better) Translates to: KCEKDHRLGNSLKSRKFQQLTLL*RRRLRS Trigger: CGATCGCAGGCGGCGGCGGCATAAAAGTGTGAGCTG...CTGGAATTTTCTGGATTTGAGGGAATTCCCAAGCCTATGATCTTTTTCACATTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000298943.4 |
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| CDS-3UTR CCA 90 bp | AGGTTAAGGCTTGAAGTTGAATCATTCCCAGGTCTAGCTCTAAGGTTAACAAGAAGGCAGAATTCTGCCTaGGTACCACCTGCCAGGAGA | + |
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Preference number: 4 (lower is better) Translates to: RLRLEVESFPGLALRLTRRQNSA*VPPARR Trigger: TCTCCTGGCAGGTGGTACCCAGGCAGAATTCTGCCT...TCTTGTTAACCTTAGAGCTAGACCTGGGAATGATTCAACTTCAAGCCTTAACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298943.4 |
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| CDS-3UTR GCA 90 bp | CTCACAAGAACCAAAGCTGACATATGGATAAAAGCAGCAAGATCACAGTACACCAGCATCTTGGGCAATTaGACTAGCACGCACCTGGTT | + |
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Preference number: 4 (lower is better) Translates to: LTRTKADIWIKAARSQYTSILGN*TSTHLV Trigger: AACCAGGTGCGTGCTAGTGCAATTGCCCAAGATGCT...GGTGTACTGTGATCTTGCTGCTTTTATCCATATGTCAGCTTTGGTTCTTGTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298943.4 |
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| CDS-3UTR GCA 90 bp | AGGTTAAGGCTTGAAGTTGAATCATTCCCAGGTCTAGCTCTAAGGTTAACAAGATATACACAACTGAGGTaGCCTGCCATTGGCATCCCC | + |
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Preference number: 4 (lower is better) Translates to: RLRLEVESFPGLALRLTRYTQLR*PAIGIP Trigger: GGGGATGCCAATGGCAGGGCACCTCAGTTGTGTATA...TCTTGTTAACCTTAGAGCTAGACCTGGGAATGATTCAACTTCAAGCCTTAACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298943.4 |
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| CDS-3UTR TCA 90 bp | GCAGGTAAACTCACAAGAACCAAAGCTGACATATGGATAAAAGCAGCAAGATCATCTCCCGGCTCCAAATaGAGAACCACACTGTTACTG | + |
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Preference number: 4 (lower is better) Translates to: AGKLTRTKADIWIKAARSSPGSK*RTTLLL Trigger: CAGTAACAGTGTGGTTCTTCATTTGGAGCCGGGAGA...TGATCTTGCTGCTTTTATCCATATGTCAGCTTTGGTTCTTGTGAGTTTACCTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298943.4 |
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| CDS-3UTR GCA 90 bp | GCAGGTAAACTCACAAGAACCAAAGCTGACATATGGATAAAAGCAGCAAGATCATCCGTTTTTGCAGACTaGGCCTGTTCGCACCAACTT | + |
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Preference number: 4 (lower is better) Translates to: AGKLTRTKADIWIKAARSSVFAD*ACSHQL Trigger: AAGTTGGTGCGAACAGGCGCAGTCTGCAAAAACGGA...TGATCTTGCTGCTTTTATCCATATGTCAGCTTTGGTTCTTGTGAGTTTACCTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000298943.4 |
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| CDS-3UTR GCA 90 bp | GCAGGTAAACTCACAAGAACCAAAGCTGACATATGGATAAAAGCAGCAAGATCAGCACCTGGTTGTTTTTaGAGAGATCAGCCCACATGC | + |
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Preference number: 4 (lower is better) Translates to: AGKLTRTKADIWIKAARSAPGCF*RDQPTC Trigger: GCATGTGGGCTGATCTCTGCAAAAACAACCAGGTGC...TGATCTTGCTGCTTTTATCCATATGTCAGCTTTGGTTCTTGTGAGTTTACCTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000298943.4 |
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| CDS-3UTR TCA 90 bp | GCAGGTAAACTCACAAGAACCAAAGCTGACATATGGATAAAAGCAGCAAGATCACACCAACTTTCCGTCTaGAGTTGCCTTTTTCTGCCT | + |
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Preference number: 4 (lower is better) Translates to: AGKLTRTKADIWIKAARSHQLSV*SCLFLP Trigger: AGGCAGAAAAAGGCAACTTCAGACGGAAAGTTGGTG...TGATCTTGCTGCTTTTATCCATATGTCAGCTTTGGTTCTTGTGAGTTTACCTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000298943.4 |
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| CDS-3UTR GCA 90 bp | GCAGGTAAACTCACAAGAACCAAAGCTGACATATGGATAAAAGCAGCAAGATCATCTCTCTTCCTCCTTTaGCACCACCACAACTCGAAT | + |
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Preference number: 4 (lower is better) Translates to: AGKLTRTKADIWIKAARSSLFLL*HHHNSN Trigger: ATTCGAGTTGTGGTGGTGGCAAAGGAGGAAGAGAGA...TGATCTTGCTGCTTTTATCCATATGTCAGCTTTGGTTCTTGTGAGTTTACCTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298943.4 |
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| CDS-3UTR TCA 90 bp | GCAGGTAAACTCACAAGAACCAAAGCTGACATATGGATAAAAGCAGCAAGATCATCCCGCCATCTAATTTaGTATAGACTTCATCTCCCG | + |
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Preference number: 4 (lower is better) Translates to: AGKLTRTKADIWIKAARSSRHLI*YRLHLP Trigger: CGGGAGATGAAGTCTATATCAAATTAGATGGCGGGA...TGATCTTGCTGCTTTTATCCATATGTCAGCTTTGGTTCTTGTGAGTTTACCTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298943.4 |
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| CDS-3UTR TCA 90 bp | ACACTAACGATAAGGAGTATTTGCTTTGGCGGTAGTGGATCACACATCTGCTTATTCTTCCCCACACTATaGATGGACTCCAAGTATCAT | + |
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Preference number: 4 (lower is better) Translates to: TLTIRSICFGGSGSHICLFFPTL*MDSKYH Trigger: ATGATACTTGGAGTCCATTCATAGTGTGGGGAAGAA...TAAGCAGATGTGTGATCCACTACCGCCAAAGCAAATACTCCTTATCGTTAGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298943.4 |
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| CDS-3UTR GCA 90 bp | AAATGTGAAAAAGATCATAGGCTTGGGAATTCCCTCAAATCCAGAAAATTCCAGCGACTTTTCCGTTTTTaGAGACTGCGCCTGTTCGCA | + |
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Preference number: 4 (lower is better) Translates to: KCEKDHRLGNSLKSRKFQRLFRF*RLRLFA Trigger: TGCGAACAGGCGCAGTCTGCAAAAACGGAAAAGTCG...CTGGAATTTTCTGGATTTGAGGGAATTCCCAAGCCTATGATCTTTTTCACATTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000298943.4 |
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| CDS-3UTR CCA 90 bp | AAATGTGAAAAAGATCATAGGCTTGGGAATTCCCTCAAATCCAGAAAATTCCAGCAGAATTTTGAAGGTTaGGCGGGGACCTCTTCAGAG | + |
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Preference number: 4 (lower is better) Translates to: KCEKDHRLGNSLKSRKFQQNFEG*AGTSSE Trigger: CTCTGAAGAGGTCCCCGCCCAACCTTCAAAATTCTG...CTGGAATTTTCTGGATTTGAGGGAATTCCCAAGCCTATGATCTTTTTCACATTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000298943.4 |
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| CDS-3UTR TCA 90 bp | GCAGGTAAACTCACAAGAACCAAAGCTGACATATGGATAAAAGCAGCAAGATCAGAGTCAGGTAGCATTTaGTTTCCCCACATATACACA | + |
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Preference number: 4 (lower is better) Translates to: AGKLTRTKADIWIKAARSESGSI*FPHIYT Trigger: TGTGTATATGTGGGGAAATCAAATGCTACCTGACTC...TGATCTTGCTGCTTTTATCCATATGTCAGCTTTGGTTCTTGTGAGTTTACCTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000298943.4 |
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| CDS-3UTR TCA 90 bp | AGGTTAAGGCTTGAAGTTGAATCATTCCCAGGTCTAGCTCTAAGGTTAACAAGACACAAGAACCAAAGCTaGCATATGGATAAAAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: RLRLEVESFPGLALRLTRHKNQS*HMDKSS Trigger: GCTGCTTTTATCCATATGTCAGCTTTGGTTCTTGTG...TCTTGTTAACCTTAGAGCTAGACCTGGGAATGATTCAACTTCAAGCCTTAACCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298943.4 |
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| CDS-3UTR GCA 90 bp | GCAGGTAAACTCACAAGAACCAAAGCTGACATATGGATAAAAGCAGCAAGATCAACGATAAGGAGTATTTaGTTTGGCGGTAGTGGATCA | + |
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Preference number: 4 (lower is better) Translates to: AGKLTRTKADIWIKAARSTIRSI*FGGSGS Trigger: TGATCCACTACCGCCAAAGCAAATACTCCTTATCGT...TGATCTTGCTGCTTTTATCCATATGTCAGCTTTGGTTCTTGTGAGTTTACCTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298943.4 |
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| CDS-3UTR CCA 90 bp | AAATGTGAAAAAGATCATAGGCTTGGGAATTCCCTCAAATCCAGAAAATTCCAGGCACTAGCACGCACCTaGTTGTTTTTGCAGAGATCA | + |
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Preference number: 4 (lower is better) Translates to: KCEKDHRLGNSLKSRKFQALART*LFLQRS Trigger: TGATCTCTGCAAAAACAACCAGGTGCGTGCTAGTGC...CTGGAATTTTCTGGATTTGAGGGAATTCCCAAGCCTATGATCTTTTTCACATTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000298943.4 |
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| CDS-3UTR CCA 90 bp | CTCACAAGAACCAAAGCTGACATATGGATAAAAGCAGCAAGATCACAGTACACCGAACCACACTGTTACTaGCATAGTCGTAATTCTGAT | + |
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Preference number: 4 (lower is better) Translates to: LTRTKADIWIKAARSQYTEPHCY*HSRNSD Trigger: ATCAGAATTACGACTATGCCAGTAACAGTGTGGTTC...GGTGTACTGTGATCTTGCTGCTTTTATCCATATGTCAGCTTTGGTTCTTGTGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298943.4 |
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| CDS-3UTR CCA 90 bp | CTCACAAGAACCAAAGCTGACATATGGATAAAAGCAGCAAGATCACAGTACACCAGGACTTCATTCACATaGACACTAACGATAAGGAGT | + |
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Preference number: 4 (lower is better) Translates to: LTRTKADIWIKAARSQYTRTSFT*TLTIRS Trigger: ACTCCTTATCGTTAGTGTCCATGTGAATGAAGTCCT...GGTGTACTGTGATCTTGCTGCTTTTATCCATATGTCAGCTTTGGTTCTTGTGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298943.4 |
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| CDS-3UTR CCA 90 bp | AAATGTGAAAAAGATCATAGGCTTGGGAATTCCCTCAAATCCAGAAAATTCCAGTTGTTGTTTCCTCCATaGGCTTTCCCGCCATCTAAT | + |
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Preference number: 4 (lower is better) Translates to: KCEKDHRLGNSLKSRKFQLLFPP*AFPPSN Trigger: ATTAGATGGCGGGAAAGCCCATGGAGGAAACAACAA...CTGGAATTTTCTGGATTTGAGGGAATTCCCAAGCCTATGATCTTTTTCACATTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000298943.4 |
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| CDS-3UTR CCA 90 bp | ACACTAACGATAAGGAGTATTTGCTTTGGCGGTAGTGGATCACACATCTGCTTATCCCCACACTATGAATaGACTCCAAGTATCATAATA | + |
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Preference number: 4 (lower is better) Translates to: TLTIRSICFGGSGSHICLSPHYE*TPSIII Trigger: TATTATGATACTTGGAGTCCATTCATAGTGTGGGGA...TAAGCAGATGTGTGATCCACTACCGCCAAAGCAAATACTCCTTATCGTTAGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298943.4 |
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| CDS-3UTR CCA 90 bp | CTCACAAGAACCAAAGCTGACATATGGATAAAAGCAGCAAGATCACAGTACACCGGCAAACAATTTCTTTaGGGACAAGCAGCATTATTT | + |
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Preference number: 4 (lower is better) Translates to: LTRTKADIWIKAARSQYTGKQFL*GQAALF Trigger: AAATAATGCTGCTTGTCCCCAAAGAAATTGTTTGCC...GGTGTACTGTGATCTTGCTGCTTTTATCCATATGTCAGCTTTGGTTCTTGTGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298943.4 |
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| CDS-3UTR CCA 90 bp | ACACTAACGATAAGGAGTATTTGCTTTGGCGGTAGTGGATCACACATCTGCTTAATTCAGTTGACAAAATaGACACATAAGGGCTTTTTC | + |
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Preference number: 4 (lower is better) Translates to: TLTIRSICFGGSGSHICLIQLTK*THKGFF Trigger: GAAAAAGCCCTTATGTGTCCATTTTGTCAACTGAAT...TAAGCAGATGTGTGATCCACTACCGCCAAAGCAAATACTCCTTATCGTTAGTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000298943.4 |
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| CDS GCA 90 bp | AGGCCGGGCGCCCCGGGCGGGCCCTGGATGAAGGTGGGCAGGGACTaGATGAGGCCGCGGTCGGGCGTGGCAGCGGTGCTGGGCGCCTTG | + |
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Preference number: 5 (lower is better) Translates to: RPGAPGGPWMKVGRD*MRPRSGVAAVLGAL Trigger: CAAGGCGCCCAGCACCGCTGCCACGCCCGACCGCGGCCTCATGCAGTCCCTGCCCACCTTCATCCAGGGCCCGCCCGGGGCGCCCGGCCT 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619991.1 |
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| CDS GCA 90 bp | CTGCCGGCCTCGCCTTTGGGGCCCTGGATGAAGGTGGGCAGGGACTaGATGAGGCCGCGGTCGGGCGTGGCAGCGGTGCTGGGCGCCTTG | + |
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Preference number: 5 (lower is better) Translates to: LPASPLGPWMKVGRD*MRPRSGVAAVLGAL Trigger: CAAGGCGCCCAGCACCGCTGCCACGCCCGACCGCGGCCTCATGCAGTCCCTGCCCACCTTCATCCAGGGCCCCAAAGGCGAGGCCGGCAG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298943.4 |
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| CDS-3UTR CAA 90 bp | GCAGGTAAACTCACAAGAACCAAAGCTGACATATGGATAAAAGCAGCAAGATCACTGCCGGCCTCGCCTTaGGGGCCCTGGATGAAGGTG | + |
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Preference number: 5 (lower is better) Translates to: AGKLTRTKADIWIKAARSLPASP*GPWMKV Trigger: CACCTTCATCCAGGGCCCCAAAGGCGAGGCCGGCAG...TGATCTTGCTGCTTTTATCCATATGTCAGCTTTGGTTCTTGTGAGTTTACCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000298943.4 |
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| CDS-3UTR CAA 90 bp | AAATGTGAAAAAGATCATAGGCTTGGGAATTCCCTCAAATCCAGAAAATTCCAGCGGGCGCCCAGTGACTaGAGCCGAAGTCCCGAGCCC | + |
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Preference number: 5 (lower is better) Translates to: KCEKDHRLGNSLKSRKFQRAPSD*SRSPEP Trigger: GGGCTCGGGACTTCGGCTCAAGTCACTGGGCGCCCG...CTGGAATTTTCTGGATTTGAGGGAATTCCCAAGCCTATGATCTTTTTCACATTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000298943.4 |
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| CDS-3UTR CAA 90 bp | CTCACAAGAACCAAAGCTGACATATGGATAAAAGCAGCAAGATCACAGTACACCTCGACTTTTCCGTTTTaGCAGACTGCGCCTGTTCGC | + |
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Preference number: 5 (lower is better) Translates to: LTRTKADIWIKAARSQYTSTFPF*QTAPVR Trigger: GCGAACAGGCGCAGTCTGCAAAAACGGAAAAGTCGA...GGTGTACTGTGATCTTGCTGCTTTTATCCATATGTCAGCTTTGGTTCTTGTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000298943.4 |
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| CDS-3UTR CAA 90 bp | AGGTTAAGGCTTGAAGTTGAATCATTCCCAGGTCTAGCTCTAAGGTTAACAAGACGCGGGGCGATCCTCTaGTCTGCTTTTGGACAGAAT | + |
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Preference number: 5 (lower is better) Translates to: RLRLEVESFPGLALRLTRRGAIL*SAFGQN Trigger: ATTCTGTCCAAAAGCAGACAAGAGGATCGCCCCGCG...TCTTGTTAACCTTAGAGCTAGACCTGGGAATGATTCAACTTCAAGCCTTAACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000298943.4 |
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| CDS-3UTR CAA 90 bp | CTCACAAGAACCAAAGCTGACATATGGATAAAAGCAGCAAGATCACAGTACACCCTAGCACGCACCTGGTaGTTTTTGCAGAGATCAGCC | + |
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Preference number: 5 (lower is better) Translates to: LTRTKADIWIKAARSQYTLARTW*FLQRSA Trigger: GGCTGATCTCTGCAAAAACAACCAGGTGCGTGCTAG...GGTGTACTGTGATCTTGCTGCTTTTATCCATATGTCAGCTTTGGTTCTTGTGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000298943.4 |
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| CDS-3UTR CAA 90 bp | CTCACAAGAACCAAAGCTGACATATGGATAAAAGCAGCAAGATCACAGTACACCACTTTCCGTCTGAAGTaGCCTTTTTCTGCCTCCTCC | + |
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Preference number: 5 (lower is better) Translates to: LTRTKADIWIKAARSQYTTFRLK*PFSASS Trigger: GGAGGAGGCAGAAAAAGGCAACTTCAGACGGAAAGT...GGTGTACTGTGATCTTGCTGCTTTTATCCATATGTCAGCTTTGGTTCTTGTGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000298943.4 |
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| CDS-3UTR CAA 90 bp | ACACTAACGATAAGGAGTATTTGCTTTGGCGGTAGTGGATCACACATCTGCTTACTTTTGGACAGAATTTaGAAGGTTGGGCGGGGACCT | + |
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Preference number: 5 (lower is better) Translates to: TLTIRSICFGGSGSHICLLLDRI*KVGRGP Trigger: AGGTCCCCGCCCAACCTTCAAAATTCTGTCCAAAAG...TAAGCAGATGTGTGATCCACTACCGCCAAAGCAAATACTCCTTATCGTTAGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000298943.4 |
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| CDS-3UTR CAA 90 bp | AGGTTAAGGCTTGAAGTTGAATCATTCCCAGGTCTAGCTCTAAGGTTAACAAGATTCTCTCTTCCTCCTTaGCCACCACCACAACTCGAA | + |
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Preference number: 5 (lower is better) Translates to: RLRLEVESFPGLALRLTRFSLPP*PPPQLE Trigger: TTCGAGTTGTGGTGGTGGCAAAGGAGGAAGAGAGAA...TCTTGTTAACCTTAGAGCTAGACCTGGGAATGATTCAACTTCAAGCCTTAACCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298943.4 |
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| CDS-3UTR CAA 90 bp | ACACTAACGATAAGGAGTATTTGCTTTGGCGGTAGTGGATCACACATCTGCTTAATTCTGATCAGCATCTaGGGCAATTGCACTAGCACG | + |
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Preference number: 5 (lower is better) Translates to: TLTIRSICFGGSGSHICLILISI*GNCTST Trigger: CGTGCTAGTGCAATTGCCCAAGATGCTGATCAGAAT...TAAGCAGATGTGTGATCCACTACCGCCAAAGCAAATACTCCTTATCGTTAGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298943.4 |
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| CDS-3UTR CAA 90 bp | AAATGTGAAAAAGATCATAGGCTTGGGAATTCCCTCAAATCCAGAAAATTCCAGCGCACCTGGTTGTTTTaGCAGAGATCAGCCCACATG | + |
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Preference number: 5 (lower is better) Translates to: KCEKDHRLGNSLKSRKFQRTWLF*QRSAHM Trigger: CATGTGGGCTGATCTCTGCAAAAACAACCAGGTGCG...CTGGAATTTTCTGGATTTGAGGGAATTCCCAAGCCTATGATCTTTTTCACATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000298943.4 |
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| CDS-3UTR CAA 90 bp | CTCACAAGAACCAAAGCTGACATATGGATAAAAGCAGCAAGATCACAGTACACCAGGCAAACAATTTCTTaGGGGACAAGCAGCATTATT | + |
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Preference number: 5 (lower is better) Translates to: LTRTKADIWIKAARSQYTRQTIS*GTSSII Trigger: AATAATGCTGCTTGTCCCCAAAGAAATTGTTTGCCT...GGTGTACTGTGATCTTGCTGCTTTTATCCATATGTCAGCTTTGGTTCTTGTGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000298943.4 |
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| CDS-3UTR CAA 90 bp | AGGTTAAGGCTTGAAGTTGAATCATTCCCAGGTCTAGCTCTAAGGTTAACAAGATCCTCTTGTCTGCTTTaGGACAGAATTTTGAAGGTT | + |
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Preference number: 5 (lower is better) Translates to: RLRLEVESFPGLALRLTRSSCLL*DRILKV Trigger: AACCTTCAAAATTCTGTCCAAAAGCAGACAAGAGGA...TCTTGTTAACCTTAGAGCTAGACCTGGGAATGATTCAACTTCAAGCCTTAACCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298943.4 |
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| CDS-3UTR CAA 90 bp | GCAGGTAAACTCACAAGAACCAAAGCTGACATATGGATAAAAGCAGCAAGATCAAAAAAGATCATAGGCTaGGGAATTCCCTCAAATCCA | + |
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Preference number: 5 (lower is better) Translates to: AGKLTRTKADIWIKAARSKKIIG*GIPSNP Trigger: TGGATTTGAGGGAATTCCCAAGCCTATGATCTTTTT...TGATCTTGCTGCTTTTATCCATATGTCAGCTTTGGTTCTTGTGAGTTTACCTGC 40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000298943.4 |
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| CDS GCA 72 bp | GCCCCGGGCGGGCCCTGGATGAAGGTGGGCAGGGACTaGATGAGGCCGCGGTCGGGCGTGGCAGCGGTGCTG | + |
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Preference number: 6 (lower is better) Translates to: APGGPWMKVGRD*MRPRSGVAAVL Trigger: CAGCACCGCTGCCACGCCCGACCGCGGCCTCATGCAGTCCCTGCCCACCTTCATCCAGGGCCCGCCCGGGGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619991.1 |
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| CDS GCA 72 bp | CACGCACCTGGTTGTTTTTGCAGAGATCAGCCCACATaGTGGTGCCGTCCCCTCCGCGCATCAGGACGTGGT | + |
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Preference number: 6 (lower is better) Translates to: HAPGCFCRDQPT*WCRPLRASGRG Trigger: ACCACGTCCTGATGCGCGGAGGGGACGGCACCAGCATGTGGGCTGATCTCTGCAAAAACAACCAGGTGCGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000298943.4 ENST00000619991.1 |
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| CDS GCA 72 bp | TATGCCGCCGCCGCCTGCGATCGACTTTTCCGTTTTTaGAGACTGCGCCTGTTCGCACCAACTTTCCGTCTG | + |
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Preference number: 6 (lower is better) Translates to: YAAAACDRLFRF*RLRLFAPTFRL Trigger: CAGACGGAAAGTTGGTGCGAACAGGCGCAGTCTGCAAAAACGGAAAAGTCGATCGCAGGCGGCGGCGGCATA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000298943.4 |
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| CDS CAA 72 bp | TTATGCCGCCGCCGCCTGCGATCGACTTTTCCGTTTTaGCAGACTGCGCCTGTTCGCACCAACTTTCCGTCT | + |
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Preference number: 6 (lower is better) Translates to: LCRRRLRSTFPF*QTAPVRTNFPS Trigger: AGACGGAAAGTTGGTGCGAACAGGCGCAGTCTGCAAAAACGGAAAAGTCGATCGCAGGCGGCGGCGGCATAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000298943.4 |
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