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Pregenerated sensors for C1ORF53 (Homo sapiens)

Ensembl gene IDs: ENSG00000203724

Ensembl transcript IDs: ENST00000367393.8, ENST00000436652.1, ENST00000542800.1

Found 12 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp CTCTTACCCAGAGAGGTGCTGGCGGCGGGGCGGCGGAAGGTTGCCTaGAGAGCGCGGCACCCGTCCGTGCCCAGATCTGCCTGGCCGCCA +
Preference number: 5 (lower is better)
Translates to: LLPREVLAAGRRKVA*RARHPSVPRSAWPP
Trigger: TGGCGGCCAGGCAGATCTGGGCACGGACGGGTGCCGCGCTCTGCAGGCAACCTTCCGCCGCCCCGCCGCCAGCACCTCTCTGGGTAAGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367393.8
CDS GCA 90 bp CCAGCTCTTACCCAGAGAGGTGCTGGCGGCGGGGCGGCGGAAGGTTaGCTGCAGAGCGCGGCACCCGTCCGTGCCCAGATCTGCCTGGCC +
Preference number: 5 (lower is better)
Translates to: PALTQRGAGGGAAEG*LQSAAPVRAQICLA
Trigger: GGCCAGGCAGATCTGGGCACGGACGGGTGCCGCGCTCTGCAGGCAACCTTCCGCCGCCCCGCCGCCAGCACCTCTCTGGGTAAGAGCTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367393.8
CDS GCA 90 bp CCGCCGCAGTTTCCCTCGTTAGCAGGGCAGAGGGTTAAGCTGAGCTaGTGTCGGAACCCAGCTCTTACCCAGAGAGGTGCTGGCGGCGGG +
Preference number: 5 (lower is better)
Translates to: PPQFPSLAGQRVKLS*CRNPALTQRGAGGG
Trigger: CCCGCCGCCAGCACCTCTCTGGGTAAGAGCTGGGTTCCGACAGCAGCTCAGCTTAACCCTCTGCCCTGCTAACGAGGGAAACTGCGGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367393.8
CDS GCA 72 bp GGCGGAAGGTTGCCTGCAGAGCGCGGCACCCGTCCGTaGCCAGATCTGCCTGGCCGCCATGCCGCCGCCGGC +
Preference number: 6 (lower is better)
Translates to: GGRLPAERGTRP*PDLPGRHAAAG
Trigger: GCCGGCGGCGGCATGGCGGCCAGGCAGATCTGGGCACGGACGGGTGCCGCGCTCTGCAGGCAACCTTCCGCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367393.8
CDS GCA 72 bp AGAGAGGTGCTGGCGGCGGGGCGGCGGAAGGTTGCCTaGAGAGCGCGGCACCCGTCCGTGCCCAGATCTGCC +
Preference number: 6 (lower is better)
Translates to: REVLAAGRRKVA*RARHPSVPRSA
Trigger: GGCAGATCTGGGCACGGACGGGTGCCGCGCTCTGCAGGCAACCTTCCGCCGCCCCGCCGCCAGCACCTCTCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367393.8
CDS CAA 90 bp CCCAGCTCTTACCCAGAGAGGTGCTGGCGGCGGGGCGGCGGAAGGTaGCCTGCAGAGCGCGGCACCCGTCCGTGCCCAGATCTGCCTGGC +
Preference number: 6 (lower is better)
Translates to: PSSYPERCWRRGGGR*PAERGTRPCPDLPG
Trigger: GCCAGGCAGATCTGGGCACGGACGGGTGCCGCGCTCTGCAGGCAACCTTCCGCCGCCCCGCCGCCAGCACCTCTCTGGGTAAGAGCTGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367393.8
CDS CAA 72 bp TACCCAGAGAGGTGCTGGCGGCGGGGCGGCGGAAGGTaGCCTGCAGAGCGCGGCACCCGTCCGTGCCCAGAT +
Preference number: 6 (lower is better)
Translates to: YPERCWRRGGGR*PAERGTRPCPD
Trigger: ATCTGGGCACGGACGGGTGCCGCGCTCTGCAGGCAACCTTCCGCCGCCCCGCCGCCAGCACCTCTCTGGGTA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367393.8
CDS CCA 72 bp CTGCTGTCGGAACCCAGCTCTTACCCAGAGAGGTGCTaGCGGCGGGGCGGCGGAAGGTTGCCTGCAGAGCGC +
Preference number: 6 (lower is better)
Translates to: LLSEPSSYPERC*RRGGGRLPAER
Trigger: GCGCTCTGCAGGCAACCTTCCGCCGCCCCGCCGCCAGCACCTCTCTGGGTAAGAGCTGGGTTCCGACAGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367393.8
CDS GCA 72 bp GAGCTGCTGTCGGAACCCAGCTCTTACCCAGAGAGGTaGTGGCGGCGGGGCGGCGGAAGGTTGCCTGCAGAG +
Preference number: 6 (lower is better)
Translates to: ELLSEPSSYPER*WRRGGGRLPAE
Trigger: CTCTGCAGGCAACCTTCCGCCGCCCCGCCGCCAGCACCTCTCTGGGTAAGAGCTGGGTTCCGACAGCAGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367393.8
CDS GCA 72 bp TTTCCCTCGTTAGCAGGGCAGAGGGTTAAGCTGAGCTaGTGTCGGAACCCAGCTCTTACCCAGAGAGGTGCT +
Preference number: 6 (lower is better)
Translates to: FPSLAGQRVKLS*CRNPALTQRGA
Trigger: AGCACCTCTCTGGGTAAGAGCTGGGTTCCGACAGCAGCTCAGCTTAACCCTCTGCCCTGCTAACGAGGGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367393.8
CDS CAA 90 bp ACCATATGGACAATGTCTGCACGCAGAGCCACAACATTCACCTCTTaGCAAGTGGGCAATCTGTGTGAGCACCACATAGCCAGTAGCTGG +
Preference number: 6 (lower is better)
Translates to: TIWTMSARRATTFTS*QVGNLCEHHIASSW
Trigger: CCAGCTACTGGCTATGTGGTGCTCACACAGATTGCCCACTTGCAAAGAGGTGAATGTTGTGGCTCTGCGTGCAGACATTGTCCATATGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367393.8
ENST00000436652.1
ENST00000542800.1
CDS CAA 72 bp ACAATGTCTGCACGCAGAGCCACAACATTCACCTCTTaGCAAGTGGGCAATCTGTGTGAGCACCACATAGCC +
Preference number: 6 (lower is better)
Translates to: TMSARRATTFTS*QVGNLCEHHIA
Trigger: GGCTATGTGGTGCTCACACAGATTGCCCACTTGCAAAGAGGTGAATGTTGTGGCTCTGCGTGCAGACATTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367393.8
ENST00000436652.1
ENST00000542800.1