RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for C1ORF220 (Homo sapiens)

Ensembl gene IDs: ENSG00000213057

Ensembl transcript IDs: ENST00000367638.1, ENST00000521244.1

Found 60 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp GAAGCTGTGATGTGGCGGAAAGAGCTGGAACCGTGCAGCTGGGCTTaGTCCCCCATGTCCCTCGTCCATCCTTCGTGGCCCACTCACTTG +
Preference number: 5 (lower is better)
Translates to: EAVMWRKELEPCSWA*SPMSLVHPSWPTHL
Trigger: CAAGTGAGTGGGCCACGAAGGATGGACGAGGGACATGGGGGAGCAAGCCCAGCTGCACGGTTCCAGCTCTTTCCGCCACATCACAGCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521244.1
CDS CCA 90 bp CCGTGCAGCTGGGCTTGCTCCCCCATGTCCCTCGTCCATCCTTCGTaGCCCACTCACTTGCCAAGAGCTGTTGATGTTGAAGCACCCAGG +
Preference number: 5 (lower is better)
Translates to: PCSWACSPMSLVHPS*PTHLPRAVDVEAPR
Trigger: CCTGGGTGCTTCAACATCAACAGCTCTTGGCAAGTGAGTGGGCCACGAAGGATGGACGAGGGACATGGGGGAGCAAGCCCAGCTGCACGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521244.1
CDS CCA 90 bp ACTGCAGAAGCTGTGATGTGGCGGAAAGAGCTGGAACCGTGCAGCTaGGCTTGCTCCCCCATGTCCCTCGTCCATCCTTCGTGGCCCACT +
Preference number: 5 (lower is better)
Translates to: TAEAVMWRKELEPCS*ACSPMSLVHPSWPT
Trigger: AGTGGGCCACGAAGGATGGACGAGGGACATGGGGGAGCAAGCCCAGCTGCACGGTTCCAGCTCTTTCCGCCACATCACAGCTTCTGCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521244.1
CDS GCA 90 bp TTCCCAACTGCAGAAGCTGTGATGTGGCGGAAAGAGCTGGAACCGTaGAGCTGGGCTTGCTCCCCCATGTCCCTCGTCCATCCTTCGTGG +
Preference number: 5 (lower is better)
Translates to: FPTAEAVMWRKELEP*SWACSPMSLVHPSW
Trigger: CCACGAAGGATGGACGAGGGACATGGGGGAGCAAGCCCAGCTGCACGGTTCCAGCTCTTTCCGCCACATCACAGCTTCTGCAGTTGGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521244.1
CDS CCA 90 bp ACCTTCAAGAGTCCGTGTCCTGGAGCTCAGCAGCTGTCCTGGGCCTaGAAGACGGGGTGTGCTTCTGCTCTGTCTCCTTCTGTGGTTCTG +
Preference number: 5 (lower is better)
Translates to: TFKSPCPGAQQLSWA*KTGCASALSPSVVL
Trigger: CAGAACCACAGAAGGAGACAGAGCAGAAGCACACCCCGTCTTCCAGGCCCAGGACAGCTGCTGAGCTCCAGGACACGGACTCTTGAAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367638.1
ENST00000521244.1
CDS GCA 90 bp CTTGCTCCCCCATGTCCCTCGTCCATCCTTCGTGGCCCACTCACTTaGCAAGAGCTGTTGATGTTGAAGCACCCAGGATATCCAGGAGGC +
Preference number: 5 (lower is better)
Translates to: LAPPCPSSILRGPLT*QELLMLKHPGYPGG
Trigger: GCCTCCTGGATATCCTGGGTGCTTCAACATCAACAGCTCTTGGCAAGTGAGTGGGCCACGAAGGATGGACGAGGGACATGGGGGAGCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521244.1
CDS CCA 90 bp AAATCAACCTTCAAGAGTCCGTGTCCTGGAGCTCAGCAGCTGTCCTaGGCCTGGAAGACGGGGTGTGCTTCTGCTCTGTCTCCTTCTGTG +
Preference number: 5 (lower is better)
Translates to: KSTFKSPCPGAQQLS*AWKTGCASALSPSV
Trigger: CACAGAAGGAGACAGAGCAGAAGCACACCCCGTCTTCCAGGCCCAGGACAGCTGCTGAGCTCCAGGACACGGACTCTTGAAGGTTGATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367638.1
ENST00000521244.1
CDS CCA 90 bp ACTGAAGATCACTGTTCAGTCTTCCCAACTGCAGAAGCTGTGATGTaGCGGAAAGAGCTGGAACCGTGCAGCTGGGCTTGCTCCCCCATG +
Preference number: 5 (lower is better)
Translates to: TEDHCSVFPTAEAVM*RKELEPCSWACSPM
Trigger: CATGGGGGAGCAAGCCCAGCTGCACGGTTCCAGCTCTTTCCGCCACATCACAGCTTCTGCAGTTGGGAAGACTGAACAGTGATCTTCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521244.1
CDS TCA 90 bp CACCCAGGATATCCAGGAGGCAGCACCACATTCAGCAGGGCATTGTaGCTTGGGGCCAAGTCTTTCAGCCTCCCTCAATCTCACTTTCTT +
Preference number: 5 (lower is better)
Translates to: HPGYPGGSTTFSRAL*LGAKSFSLPQSHFL
Trigger: AAGAAAGTGAGATTGAGGGAGGCTGAAAGACTTGGCCCCAAGTCACAATGCCCTGCTGAATGTGGTGCTGCCTCCTGGATATCCTGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521244.1
CDS CCA 90 bp AAGGATGGCCTATGGGCTTGGCCCTTGAAAGTAATGTCCCAAGGCTaGGATTCCTCTTACCTGGGTCTAAAGGCAACGCCCACTAGGTCT +
Preference number: 5 (lower is better)
Translates to: KDGLWAWPLKVMSQG*DSSYLGLKATPTRS
Trigger: AGACCTAGTGGGCGTTGCCTTTAGACCCAGGTAAGAGGAATCCCAGCCTTGGGACATTACTTTCAAGGGCCAAGCCCATAGGCCATCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521244.1
CDS CCA 90 bp CCATTTTGGAAGCAGAGAGCAGCCCTCGCCAGACACCAAACCAGCTaGTGCCTTGATCTTGGATTTCCCAGCCTCCAGAACTGTGAGAAA +
Preference number: 5 (lower is better)
Translates to: PFWKQRAALARHQTS*CLDLGFPSLQNCEK
Trigger: TTTCTCACAGTTCTGGAGGCTGGGAAATCCAAGATCAAGGCACCAGCTGGTTTGGTGTCTGGCGAGGGCTGCTCTCTGCTTCCAAAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521244.1
CDS CCA 90 bp AGGATATCCAGGAGGCAGCACCACATTCAGCAGGGCATTGTGACTTaGGGCCAAGTCTTTCAGCCTCCCTCAATCTCACTTTCTTTACTT +
Preference number: 5 (lower is better)
Translates to: RISRRQHHIQQGIVT*GQVFQPPSISLSLL
Trigger: AAGTAAAGAAAGTGAGATTGAGGGAGGCTGAAAGACTTGGCCCCAAGTCACAATGCCCTGCTGAATGTGGTGCTGCCTCCTGGATATCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521244.1
CDS CCA 90 bp ATGAGGCTGGGGAGTCCAGTTCAAATGAAGAATTTGTGGCCTCTCTaGAACTCTACACTAAATGTGGTGGCACGAGGTGATAGTCCCTGG +
Preference number: 5 (lower is better)
Translates to: MRLGSPVQMKNLWPL*NSTLNVVARGDSPW
Trigger: CCAGGGACTATCACCTCGTGCCACCACATTTAGTGTAGAGTTCCAGAGAGGCCACAAATTCTTCATTTGAACTGGACTCCCCAGCCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521244.1
CDS TCA 90 bp GACAACACAGTCCACTCAAGGAGGACAAACCCAGTAAGTGACTTATaGAGCCCTAGCTACCCAAAGAATGTTCTAGAAGGATGGCCTATG +
Preference number: 5 (lower is better)
Translates to: DNTVHSRRTNPVSDL*SPSYPKNVLEGWPM
Trigger: CATAGGCCATCCTTCTAGAACATTCTTTGGGTAGCTAGGGCTTCATAAGTCACTTACTGGGTTTGTCCTCCTTGAGTGGACTGTGTTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521244.1
CDS CCA 90 bp CTCACAGGGATCATGGGAAGGTTAAAGAAGTGGAACTGGTTCAGCTaGAGCTTAGTAAGTAGTCAAAATCAACCTTCAAGAGTCCGTGTC +
Preference number: 5 (lower is better)
Translates to: LTGIMGRLKKWNWFS*SLVSSQNQPSRVRV
Trigger: GACACGGACTCTTGAAGGTTGATTTTGACTACTTACTAAGCTCCAGCTGAACCAGTTCCACTTCTTTAACCTTCCCATGATCCCTGTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367638.1
ENST00000521244.1
CDS CCA 90 bp CACAGACCCCTCACAGGGATCATGGGAAGGTTAAAGAAGTGGAACTaGTTCAGCTGGAGCTTAGTAAGTAGTCAAAATCAACCTTCAAGA +
Preference number: 5 (lower is better)
Translates to: HRPLTGIMGRLKKWN*FSWSLVSSQNQPSR
Trigger: TCTTGAAGGTTGATTTTGACTACTTACTAAGCTCCAGCTGAACCAGTTCCACTTCTTTAACCTTCCCATGATCCCTGTGAGGGGTCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521244.1
CDS CCA 90 bp CAATACCACAGACCCCTCACAGGGATCATGGGAAGGTTAAAGAAGTaGAACTGGTTCAGCTGGAGCTTAGTAAGTAGTCAAAATCAACCT +
Preference number: 5 (lower is better)
Translates to: QYHRPLTGIMGRLKK*NWFSWSLVSSQNQP
Trigger: AGGTTGATTTTGACTACTTACTAAGCTCCAGCTGAACCAGTTCCACTTCTTTAACCTTCCCATGATCCCTGTGAGGGGTCTGTGGTATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521244.1
CDS GCA 72 bp ATGTGGCGGAAAGAGCTGGAACCGTGCAGCTGGGCTTaGTCCCCCATGTCCCTCGTCCATCCTTCGTGGCCC +
Preference number: 6 (lower is better)
Translates to: MWRKELEPCSWA*SPMSLVHPSWP
Trigger: GGGCCACGAAGGATGGACGAGGGACATGGGGGAGCAAGCCCAGCTGCACGGTTCCAGCTCTTTCCGCCACAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521244.1
CDS CAA 72 bp GATGTGGCGGAAAGAGCTGGAACCGTGCAGCTGGGCTaGCTCCCCCATGTCCCTCGTCCATCCTTCGTGGCC +
Preference number: 6 (lower is better)
Translates to: DVAERAGTVQLG*LPHVPRPSFVA
Trigger: GGCCACGAAGGATGGACGAGGGACATGGGGGAGCAAGCCCAGCTGCACGGTTCCAGCTCTTTCCGCCACATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521244.1
CDS CCA 72 bp GCTGTGATGTGGCGGAAAGAGCTGGAACCGTGCAGCTaGGCTTGCTCCCCCATGTCCCTCGTCCATCCTTCG +
Preference number: 6 (lower is better)
Translates to: AVMWRKELEPCS*ACSPMSLVHPS
Trigger: CGAAGGATGGACGAGGGACATGGGGGAGCAAGCCCAGCTGCACGGTTCCAGCTCTTTCCGCCACATCACAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521244.1
CDS GCA 72 bp GCAGAAGCTGTGATGTGGCGGAAAGAGCTGGAACCGTaGAGCTGGGCTTGCTCCCCCATGTCCCTCGTCCAT +
Preference number: 6 (lower is better)
Translates to: AEAVMWRKELEP*SWACSPMSLVH
Trigger: ATGGACGAGGGACATGGGGGAGCAAGCCCAGCTGCACGGTTCCAGCTCTTTCCGCCACATCACAGCTTCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521244.1
CDS CCA 72 bp AGTCCGTGTCCTGGAGCTCAGCAGCTGTCCTGGGCCTaGAAGACGGGGTGTGCTTCTGCTCTGTCTCCTTCT +
Preference number: 6 (lower is better)
Translates to: SPCPGAQQLSWA*KTGCASALSPS
Trigger: AGAAGGAGACAGAGCAGAAGCACACCCCGTCTTCCAGGCCCAGGACAGCTGCTGAGCTCCAGGACACGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367638.1
ENST00000521244.1
CDS CAA 90 bp AGAAGCTGTGATGTGGCGGAAAGAGCTGGAACCGTGCAGCTGGGCTaGCTCCCCCATGTCCCTCGTCCATCCTTCGTGGCCCACTCACTT +
Preference number: 6 (lower is better)
Translates to: RSCDVAERAGTVQLG*LPHVPRPSFVAHSL
Trigger: AAGTGAGTGGGCCACGAAGGATGGACGAGGGACATGGGGGAGCAAGCCCAGCTGCACGGTTCCAGCTCTTTCCGCCACATCACAGCTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521244.1
CDS CAA 90 bp GCTTGCTCCCCCATGTCCCTCGTCCATCCTTCGTGGCCCACTCACTaGCCAAGAGCTGTTGATGTTGAAGCACCCAGGATATCCAGGAGG +
Preference number: 6 (lower is better)
Translates to: ACSPMSLVHPSWPTH*PRAVDVEAPRISRR
Trigger: CCTCCTGGATATCCTGGGTGCTTCAACATCAACAGCTCTTGGCAAGTGAGTGGGCCACGAAGGATGGACGAGGGACATGGGGGAGCAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521244.1
CDS TCA 72 bp CCAGCCCACTTCTCTTCCCACCAGGCTCCGGTGCCATaGAAGTTCTTCCATACAGGCATGTGGACACCCCAG +
Preference number: 6 (lower is better)
Translates to: PAHFSSHQAPVP*KFFHTGMWTPQ
Trigger: CTGGGGTGTCCACATGCCTGTATGGAAGAACTTTCATGGCACCGGAGCCTGGTGGGAAGAGAAGTGGGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521244.1
CDS GCA 72 bp CAGAGAGCAGCCCTCGCCAGACACCAAACCAGCTGGTaGCTTGATCTTGGATTTCCCAGCCTCCAGAACTGT +
Preference number: 6 (lower is better)
Translates to: QRAALARHQTSW*LDLGFPSLQNC
Trigger: ACAGTTCTGGAGGCTGGGAAATCCAAGATCAAGGCACCAGCTGGTTTGGTGTCTGGCGAGGGCTGCTCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521244.1
CDS CCA 72 bp TGGGCTTGCTCCCCCATGTCCCTCGTCCATCCTTCGTaGCCCACTCACTTGCCAAGAGCTGTTGATGTTGAA +
Preference number: 6 (lower is better)
Translates to: WACSPMSLVHPS*PTHLPRAVDVE
Trigger: TTCAACATCAACAGCTCTTGGCAAGTGAGTGGGCCACGAAGGATGGACGAGGGACATGGGGGAGCAAGCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521244.1
CDS CCA 72 bp CACTGTTCAGTCTTCCCAACTGCAGAAGCTGTGATGTaGCGGAAAGAGCTGGAACCGTGCAGCTGGGCTTGC +
Preference number: 6 (lower is better)
Translates to: HCSVFPTAEAVM*RKELEPCSWAC
Trigger: GCAAGCCCAGCTGCACGGTTCCAGCTCTTTCCGCCACATCACAGCTTCTGCAGTTGGGAAGACTGAACAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521244.1
CDS CCA 72 bp AAGCAGAGAGCAGCCCTCGCCAGACACCAAACCAGCTaGTGCCTTGATCTTGGATTTCCCAGCCTCCAGAAC +
Preference number: 6 (lower is better)
Translates to: KQRAALARHQTS*CLDLGFPSLQN
Trigger: GTTCTGGAGGCTGGGAAATCCAAGATCAAGGCACCAGCTGGTTTGGTGTCTGGCGAGGGCTGCTCTCTGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521244.1
CDS CAA 72 bp GAGCAGCCCTCGCCAGACACCAAACCAGCTGGTGCCTaGATCTTGGATTTCCCAGCCTCCAGAACTGTGAGA +
Preference number: 6 (lower is better)
Translates to: EQPSPDTKPAGA*ILDFPASRTVR
Trigger: TCTCACAGTTCTGGAGGCTGGGAAATCCAAGATCAAGGCACCAGCTGGTTTGGTGTCTGGCGAGGGCTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521244.1
CDS CAA 90 bp TCGTCCATCCTTCGTGGCCCACTCACTTGCCAAGAGCTGTTGATGTaGAAGCACCCAGGATATCCAGGAGGCAGCACCACATTCAGCAGG +
Preference number: 6 (lower is better)
Translates to: SSILRGPLTCQELLM*KHPGYPGGSTTFSR
Trigger: CCTGCTGAATGTGGTGCTGCCTCCTGGATATCCTGGGTGCTTCAACATCAACAGCTCTTGGCAAGTGAGTGGGCCACGAAGGATGGACGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521244.1
CDS CAA 90 bp TGTCCCTCGTCCATCCTTCGTGGCCCACTCACTTGCCAAGAGCTGTaGATGTTGAAGCACCCAGGATATCCAGGAGGCAGCACCACATTC +
Preference number: 6 (lower is better)
Translates to: CPSSILRGPLTCQEL*MLKHPGYPGGSTTF
Trigger: GAATGTGGTGCTGCCTCCTGGATATCCTGGGTGCTTCAACATCAACAGCTCTTGGCAAGTGAGTGGGCCACGAAGGATGGACGAGGGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521244.1
CDS CAA 72 bp CTTCGTGGCCCACTCACTTGCCAAGAGCTGTTGATGTaGAAGCACCCAGGATATCCAGGAGGCAGCACCACA +
Preference number: 6 (lower is better)
Translates to: LRGPLTCQELLM*KHPGYPGGSTT
Trigger: TGTGGTGCTGCCTCCTGGATATCCTGGGTGCTTCAACATCAACAGCTCTTGGCAAGTGAGTGGGCCACGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521244.1
CDS CAA 72 bp TCCATCCTTCGTGGCCCACTCACTTGCCAAGAGCTGTaGATGTTGAAGCACCCAGGATATCCAGGAGGCAGC +
Preference number: 6 (lower is better)
Translates to: SILRGPLTCQEL*MLKHPGYPGGS
Trigger: GCTGCCTCCTGGATATCCTGGGTGCTTCAACATCAACAGCTCTTGGCAAGTGAGTGGGCCACGAAGGATGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521244.1
CDS CAA 72 bp CCCATGTCCCTCGTCCATCCTTCGTGGCCCACTCACTaGCCAAGAGCTGTTGATGTTGAAGCACCCAGGATA +
Preference number: 6 (lower is better)
Translates to: PMSLVHPSWPTH*PRAVDVEAPRI
Trigger: TATCCTGGGTGCTTCAACATCAACAGCTCTTGGCAAGTGAGTGGGCCACGAAGGATGGACGAGGGACATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521244.1
CDS TCA 72 bp TATCCAGGAGGCAGCACCACATTCAGCAGGGCATTGTaGCTTGGGGCCAAGTCTTTCAGCCTCCCTCAATCT +
Preference number: 6 (lower is better)
Translates to: YPGGSTTFSRAL*LGAKSFSLPQS
Trigger: AGATTGAGGGAGGCTGAAAGACTTGGCCCCAAGTCACAATGCCCTGCTGAATGTGGTGCTGCCTCCTGGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521244.1
CDS GCA 72 bp CCATGTCCCTCGTCCATCCTTCGTGGCCCACTCACTTaGCAAGAGCTGTTGATGTTGAAGCACCCAGGATAT +
Preference number: 6 (lower is better)
Translates to: PCPSSILRGPLT*QELLMLKHPGY
Trigger: ATATCCTGGGTGCTTCAACATCAACAGCTCTTGGCAAGTGAGTGGGCCACGAAGGATGGACGAGGGACATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521244.1
CDS CCA 72 bp CTATGGGCTTGGCCCTTGAAAGTAATGTCCCAAGGCTaGGATTCCTCTTACCTGGGTCTAAAGGCAACGCCC +
Preference number: 6 (lower is better)
Translates to: LWAWPLKVMSQG*DSSYLGLKATP
Trigger: GGGCGTTGCCTTTAGACCCAGGTAAGAGGAATCCCAGCCTTGGGACATTACTTTCAAGGGCCAAGCCCATAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521244.1
CDS CCA 72 bp TCTACACTAAATGTGGTGGCACGAGGTGATAGTCCCTaGTGCCCAGTCTATAGCCCAGCCCACTTCTCTTCC +
Preference number: 6 (lower is better)
Translates to: STLNVVARGDSP*CPVYSPAHFSS
Trigger: GGAAGAGAAGTGGGCTGGGCTATAGACTGGGCACCAGGGACTATCACCTCGTGCCACCACATTTAGTGTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521244.1
CDS CAA 90 bp GGAAGCAGAGAGCAGCCCTCGCCAGACACCAAACCAGCTGGTGCCTaGATCTTGGATTTCCCAGCCTCCAGAACTGTGAGAAATAAATGT +
Preference number: 6 (lower is better)
Translates to: GSREQPSPDTKPAGA*ILDFPASRTVRNKC
Trigger: ACATTTATTTCTCACAGTTCTGGAGGCTGGGAAATCCAAGATCAAGGCACCAGCTGGTTTGGTGTCTGGCGAGGGCTGCTCTCTGCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521244.1
CDS CAA 72 bp CAGAGAGCCTGGGGCTGCTGCAGAGCAAGTTCTCTGTaGTTGGCAAATAAAGCCATAGCAGAGATGACTCCA +
Preference number: 6 (lower is better)
Translates to: QRAWGCCRASSL*LANKAIAEMTP
Trigger: TGGAGTCATCTCTGCTATGGCTTTATTTGCCAACAACAGAGAACTTGCTCTGCAGCAGCCCCAGGCTCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367638.1
ENST00000521244.1
CDS CAA 72 bp CCCTCGCCAGACACCAAACCAGCTGGTGCCTTGATCTaGGATTTCCCAGCCTCCAGAACTGTGAGAAATAAA +
Preference number: 6 (lower is better)
Translates to: PSPDTKPAGALI*DFPASRTVRNK
Trigger: TTTATTTCTCACAGTTCTGGAGGCTGGGAAATCCAAGATCAAGGCACCAGCTGGTTTGGTGTCTGGCGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521244.1
CDS CAA 90 bp AGCCCTAGCTACCCAAAGAATGTTCTAGAAGGATGGCCTATGGGCTaGGCCCTTGAAAGTAATGTCCCAAGGCTGGGATTCCTCTTACCT +
Preference number: 6 (lower is better)
Translates to: SPSYPKNVLEGWPMG*ALESNVPRLGFLLP
Trigger: AGGTAAGAGGAATCCCAGCCTTGGGACATTACTTTCAAGGGCCAAGCCCATAGGCCATCCTTCTAGAACATTCTTTGGGTAGCTAGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521244.1
CDS CAA 90 bp AGAGAGCAGCCCTCGCCAGACACCAAACCAGCTGGTGCCTTGATCTaGGATTTCCCAGCCTCCAGAACTGTGAGAAATAAATGTCTATTG +
Preference number: 6 (lower is better)
Translates to: REQPSPDTKPAGALI*DFPASRTVRNKCLL
Trigger: CAATAGACATTTATTTCTCACAGTTCTGGAGGCTGGGAAATCCAAGATCAAGGCACCAGCTGGTTTGGTGTCTGGCGAGGGCTGCTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521244.1
CDS CAA 90 bp CTGCAGAGGAACATGAGGCTGGGGAGTCCAGTTCAAATGAAGAATTaGTGGCCTCTCTGGAACTCTACACTAAATGTGGTGGCACGAGGT +
Preference number: 6 (lower is better)
Translates to: LQRNMRLGSPVQMKN*WPLWNSTLNVVARG
Trigger: ACCTCGTGCCACCACATTTAGTGTAGAGTTCCAGAGAGGCCACAAATTCTTCATTTGAACTGGACTCCCCAGCCTCATGTTCCTCTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521244.1
CDS CCA 72 bp CTTATGAACGACAGTTTCTCGCTTGCCATGATTCTGTaGAACTGGGCATCCGGCATCTCAGAGATGGGAAGT +
Preference number: 6 (lower is better)
Translates to: LMNDSFSLAMIL*NWASGISEMGS
Trigger: ACTTCCCATCTCTGAGATGCCGGATGCCCAGTTCCACAGAATCATGGCAAGCGAGAAACTGTCGTTCATAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367638.1
CDS GCA 72 bp GCAGGACTAAGATACCATTCCATGGAAATACAGGTGTaGACACCGACAACACAGTCCACTCAAGGAGGACAA +
Preference number: 6 (lower is better)
Translates to: AGLRYHSMEIQV*TPTTQSTQGGQ
Trigger: TTGTCCTCCTTGAGTGGACTGTGTTGTCGGTGTGCACACCTGTATTTCCATGGAATGGTATCTTAGTCCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521244.1
CDS CAA 72 bp TACCCAAAGAATGTTCTAGAAGGATGGCCTATGGGCTaGGCCCTTGAAAGTAATGTCCCAAGGCTGGGATTC +
Preference number: 6 (lower is better)
Translates to: YPKNVLEGWPMG*ALESNVPRLGF
Trigger: GAATCCCAGCCTTGGGACATTACTTTCAAGGGCCAAGCCCATAGGCCATCCTTCTAGAACATTCTTTGGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521244.1
CDS CCA 72 bp AGACCCCTCACAGGGATCATGGGAAGGTTAAAGAAGTaGAACTGGTTCAGCTGGAGCTTAGTAAGTAGTCAA +
Preference number: 6 (lower is better)
Translates to: RPLTGIMGRLKK*NWFSWSLVSSQ
Trigger: TTGACTACTTACTAAGCTCCAGCTGAACCAGTTCCACTTCTTTAACCTTCCCATGATCCCTGTGAGGGGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367638.1
ENST00000521244.1
CDS CCA 72 bp GGGAGTCCAGTTCAAATGAAGAATTTGTGGCCTCTCTaGAACTCTACACTAAATGTGGTGGCACGAGGTGAT +
Preference number: 6 (lower is better)
Translates to: GSPVQMKNLWPL*NSTLNVVARGD
Trigger: ATCACCTCGTGCCACCACATTTAGTGTAGAGTTCCAGAGAGGCCACAAATTCTTCATTTGAACTGGACTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521244.1
CDS TCA 72 bp GTCCACTCAAGGAGGACAAACCCAGTAAGTGACTTATaGAGCCCTAGCTACCCAAAGAATGTTCTAGAAGGA +
Preference number: 6 (lower is better)
Translates to: VHSRRTNPVSDL*SPSYPKNVLEG
Trigger: TCCTTCTAGAACATTCTTTGGGTAGCTAGGGCTTCATAAGTCACTTACTGGGTTTGTCCTCCTTGAGTGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521244.1
CDS GCA 72 bp ATTTTCTTGAACTCTTATGAACGACAGTTTCTCGCTTaGCATGATTCTGTGGAACTGGGCATCCGGCATCTC +
Preference number: 6 (lower is better)
Translates to: IFLNSYERQFLA*HDSVELGIRHL
Trigger: GAGATGCCGGATGCCCAGTTCCACAGAATCATGGCAAGCGAGAAACTGTCGTTCATAAGAGTTCAAGAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367638.1
CDS CAA 72 bp AACATGAGGCTGGGGAGTCCAGTTCAAATGAAGAATTaGTGGCCTCTCTGGAACTCTACACTAAATGTGGTG +
Preference number: 6 (lower is better)
Translates to: NMRLGSPVQMKN*WPLWNSTLNVV
Trigger: CACCACATTTAGTGTAGAGTTCCAGAGAGGCCACAAATTCTTCATTTGAACTGGACTCCCCAGCCTCATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521244.1
CDS CAA 90 bp CTGGAACCCACTGGCCCTCACAGAGTTGAGAGAATATTCATTTTCTaGAACTCTTATGAACGACAGTTTCTCGCTTGCCATGATTCTGTG +
Preference number: 6 (lower is better)
Translates to: LEPTGPHRVERIFIF*NSYERQFLACHDSV
Trigger: CACAGAATCATGGCAAGCGAGAAACTGTCGTTCATAAGAGTTCAAGAAAATGAATATTCTCTCAACTCTGTGAGGGCCAGTGGGTTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367638.1
CDS CCA 72 bp GGCCATTCCATAGAAAAAGGAGTGTGCACAATGCTGTaGTTTGAATGTCTGTATCCCTCCAAAACTCATGCT +
Preference number: 6 (lower is better)
Translates to: GHSIEKGVCTML*FECLYPSKTHA
Trigger: AGCATGAGTTTTGGAGGGATACAGACATTCAAACCACAGCATTGTGCACACTCCTTTTTCTATGGAATGGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521244.1
CDS CAA 72 bp AAGTCTTTCAGCCTCCCTCAATCTCACTTTCTTTACTaGCAAATAGCAATACCACAGACCCCTCACAGGGAT +
Preference number: 6 (lower is better)
Translates to: KSFSLPQSHFLY*QIAIPQTPHRD
Trigger: ATCCCTGTGAGGGGTCTGTGGTATTGCTATTTGCAAGTAAAGAAAGTGAGATTGAGGGAGGCTGAAAGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521244.1
CDS CCA 72 bp CTCACAGGGATCATGGGAAGGTTAAAGAAGTGGAACTaGTTCAGCTGGAGCTTAGTAAGTAGTCAAAATCAA +
Preference number: 6 (lower is better)
Translates to: LTGIMGRLKKWN*FSWSLVSSQNQ
Trigger: TTGATTTTGACTACTTACTAAGCTCCAGCTGAACCAGTTCCACTTCTTTAACCTTCCCATGATCCCTGTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367638.1
ENST00000521244.1
CDS CCA 72 bp AGAATTGAAGCAGAGAAGGTGAGGACACAGATTTCTTaGCCCTTTGACGAACAAACTGAAGATCACTGTTCA +
Preference number: 6 (lower is better)
Translates to: RIEAEKVRTQIS*PFDEQTEDHCS
Trigger: TGAACAGTGATCTTCAGTTTGTTCGTCAAAGGGCCAAGAAATCTGTGTCCTCACCTTCTCTGCTTCAATTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521244.1
CDS GCA 72 bp ATAAAAGGGATTGATGGAGTGAGTTTGGACACTTTCTaGCCTTCTGTCTTTTCTGTCATTCGAGAACATACG +
Preference number: 6 (lower is better)
Translates to: IKGIDGVSLDTF*PSVFSVIREHT
Trigger: CGTATGTTCTCGAATGACAGAAAAGACAGAAGGGCAGAAAGTGTCCAAACTCACTCCATCAATCCCTTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521244.1
CDS CAA 72 bp ACTGGCCCTCACAGAGTTGAGAGAATATTCATTTTCTaGAACTCTTATGAACGACAGTTTCTCGCTTGCCAT +
Preference number: 6 (lower is better)
Translates to: TGPHRVERIFIF*NSYERQFLACH
Trigger: ATGGCAAGCGAGAAACTGTCGTTCATAAGAGTTCAAGAAAATGAATATTCTCTCAACTCTGTGAGGGCCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367638.1