Pregenerated sensors for C1ORF100 (Homo sapiens)
Ensembl gene IDs: ENSG00000173728Ensembl transcript IDs: ENST00000308105.5, ENST00000366537.5, ENST00000470211.1
Found 45 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | GGCTTTCTTCTTGCCAAGATAGGGGTGCTAACTCCTGGACACAGACTCTCAGTTCCATCCAGAGCCCCTTaGGGGTCTCCAGTGCCAGTT | + |
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Preference number: 2 (lower is better) Translates to: GFLLAKIGVLTPGHRLSVPSRAP*GSPVPV Trigger: AACTGGCACTGGAGACCCTCAAGGGGCTCTGGATGG...AACTGAGAGTCTGTGTCCAGGAGTTAGCACCCCTATCTTGGCAAGAAGAAAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000308105.5 |
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| 3UTR-3UTR TCA 90 bp | GCTACACCTGGGTTTCTCCATCCAGAGCCCCTTGAGGGTCTCCAGTGCCAGTTTAATGATCTTCTTACCTaGTCCTGCGTATACATTGGC | + |
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Preference number: 2 (lower is better) Translates to: ATPGFLHPEPLEGLQCQFNDLLT*SCVYIG Trigger: GCCAATGTATACGCAGGATCAGGTAAGAAGATCATT...AAACTGGCACTGGAGACCCTCAAGGGGCTCTGGATGGAGAAACCCAGGTGTAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308105.5 |
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| 3UTR-3UTR GCA 90 bp | CTTTTTATCAGTCCCACATCTCGCTACAGCCTCAGGCTACACCTGGGTTTCTCCGCGATGCAATTATTGTaGAGACACAATGATCTTCTT | + |
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Preference number: 2 (lower is better) Translates to: LFISPTSRYSLRLHLGFSAMQLL*RHNDLL Trigger: AAGAAGATCATTGTGTCTGCACAATAATTGCATCGC...GGAGAAACCCAGGTGTAGCCTGAGGCTGTAGCGAGATGTGGGACTGATAAAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000308105.5 |
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| 3UTR-3UTR CCA 90 bp | GTTGTCAGGCTTTCTTCTTGCCAAGATAGGGGTGCTAACTCCTGGACACAGACTATCCTGCGTATACATTaGCCTAAATGTAAGATAGCT | + |
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Preference number: 2 (lower is better) Translates to: VVRLSSCQDRGANSWTQTILRIH*PKCKIA Trigger: AGCTATCTTACATTTAGGCCAATGTATACGCAGGAT...AGTCTGTGTCCAGGAGTTAGCACCCCTATCTTGGCAAGAAGAAAGCCTGACAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308105.5 |
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| 3UTR-3UTR GCA 90 bp | TCTCAGTTAATCCTTTTTATCAGTCCCACATCTCGCTACAGCCTCAGGCTACACTTTTCCCAACAGCGATaGAATTATTGTGCAGACACA | + |
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Preference number: 2 (lower is better) Translates to: SQLILFISPTSRYSLRLHFSQQR*NYCADT Trigger: TGTGTCTGCACAATAATTGCATCGCTGTTGGGAAAA...GTGTAGCCTGAGGCTGTAGCGAGATGTGGGACTGATAAAAAGGATTAACTGAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000308105.5 |
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| 3UTR-3UTR CAA 90 bp | GTTGTCAGGCTTTCTTCTTGCCAAGATAGGGGTGCTAACTCCTGGACACAGACTTCCATCCAGAGCCCCTaGAGGGTCTCCAGTGCCAGT | + |
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Preference number: 3 (lower is better) Translates to: VVRLSSCQDRGANSWTQTSIQSP*RVSSAS Trigger: ACTGGCACTGGAGACCCTCAAGGGGCTCTGGATGGA...AGTCTGTGTCCAGGAGTTAGCACCCCTATCTTGGCAAGAAGAAAGCCTGACAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308105.5 |
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| 3UTR TCA 72 bp | CCTAGAGAAGACCCTTTAGCTTTCTGCCTGAGGAGCTaGTGCCTAGTTGTCAGGCTTTCTTCTTGCCAAGAT | + |
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Preference number: 3 (lower is better) Translates to: PREDPLAFCLRS*CLVVRLSSCQD Trigger: ATCTTGGCAAGAAGAAAGCCTGACAACTAGGCATCAGCTCCTCAGGCAGAAAGCTAAAGGGTCTTCTCTAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308105.5 |
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| 3UTR-3UTR CAA 90 bp | TCTCAGTTAATCCTTTTTATCAGTCCCACATCTCGCTACAGCCTCAGGCTACACACAGCGATGCAATTATaGTGCAGACACAATGATCTT | + |
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Preference number: 3 (lower is better) Translates to: SQLILFISPTSRYSLRLHTAMQL*CRHNDL Trigger: AAGATCATTGTGTCTGCACAATAATTGCATCGCTGT...GTGTAGCCTGAGGCTGTAGCGAGATGTGGGACTGATAAAAAGGATTAACTGAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000308105.5 |
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| CDS-3UTR TCA 90 bp | GCTACACCTGGGTTTCTCCATCCAGAGCCCCTTGAGGGTCTCCAGTGCCAGTTTGAATTGTCAAGTCTATaGGCGGTCTGGGAGCTCTCT | + |
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Preference number: 4 (lower is better) Translates to: ATPGFLHPEPLEGLQCQFELSSL*AVWELS Trigger: AGAGAGCTCCCAGACCGCTCATAGACTTGACAATTC...AAACTGGCACTGGAGACCCTCAAGGGGCTCTGGATGGAGAAACCCAGGTGTAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308105.5 |
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| CDS-3UTR TCA 90 bp | GTTGTCAGGCTTTCTTCTTGCCAAGATAGGGGTGCTAACTCCTGGACACAGACTCCATCCAGAGCCCCTTaGGGGTCTCCAGTGCCAGTT | + |
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Preference number: 4 (lower is better) Translates to: VVRLSSCQDRGANSWTQTPSRAP*GSPVPV Trigger: AACTGGCACTGGAGACCCTCAAGGGGCTCTGGATGG...AGTCTGTGTCCAGGAGTTAGCACCCCTATCTTGGCAAGAAGAAAGCCTGACAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000308105.5 |
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| CDS-3UTR GCA 90 bp | GGCTTTCTTCTTGCCAAGATAGGGGTGCTAACTCCTGGACACAGACTCTCAGTTGGAATCTGCTTGGGCTaGCGTGGGCAGAGACCTCCT | + |
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Preference number: 4 (lower is better) Translates to: GFLLAKIGVLTPGHRLSVGICLG*RGQRPP Trigger: AGGAGGTCTCTGCCCACGGCAGCCCAAGCAGATTCC...AACTGAGAGTCTGTGTCCAGGAGTTAGCACCCCTATCTTGGCAAGAAGAAAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308105.5 |
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| CDS-3UTR CCA 90 bp | GTTGTCAGGCTTTCTTCTTGCCAAGATAGGGGTGCTAACTCCTGGACACAGACTCTGCTTGGGCTGCCGTaGGCAGAGACCTCCTTGTTC | + |
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Preference number: 4 (lower is better) Translates to: VVRLSSCQDRGANSWTQTLLGLP*AETSLF Trigger: GAACAAGGAGGTCTCTGCCCACGGCAGCCCAAGCAG...AGTCTGTGTCCAGGAGTTAGCACCCCTATCTTGGCAAGAAGAAAGCCTGACAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308105.5 |
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| CDS-3UTR CCA 90 bp | GTTGTCAGGCTTTCTTCTTGCCAAGATAGGGGTGCTAACTCCTGGACACAGACTGCCTCAGGCTACACCTaGGTTTCTCCATCCAGAGCC | + |
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Preference number: 4 (lower is better) Translates to: VVRLSSCQDRGANSWTQTASGYT*VSPSRA Trigger: GGCTCTGGATGGAGAAACCCAGGTGTAGCCTGAGGC...AGTCTGTGTCCAGGAGTTAGCACCCCTATCTTGGCAAGAAGAAAGCCTGACAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308105.5 |
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| CDS-3UTR TCA 90 bp | CTTTTTATCAGTCCCACATCTCGCTACAGCCTCAGGCTACACCTGGGTTTCTCCGTCGGATGGCAGTCATaGTGGATGGGAATCTGCTTG | + |
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Preference number: 4 (lower is better) Translates to: LFISPTSRYSLRLHLGFSVGWQS*WMGICL Trigger: CAAGCAGATTCCCATCCATCATGACTGCCATCCGAC...GGAGAAACCCAGGTGTAGCCTGAGGCTGTAGCGAGATGTGGGACTGATAAAAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000308105.5 |
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| CDS-3UTR GCA 90 bp | GTTGTCAGGCTTTCTTCTTGCCAAGATAGGGGTGCTAACTCCTGGACACAGACTAGTGATGGGTACAGCTaGCTCCTGCTGCTGGATCAA | + |
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Preference number: 4 (lower is better) Translates to: VVRLSSCQDRGANSWTQTSDGYS*LLLLDQ Trigger: TTGATCCAGCAGCAGGAGGCAGCTGTACCCATCACT...AGTCTGTGTCCAGGAGTTAGCACCCCTATCTTGGCAAGAAGAAAGCCTGACAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308105.5 |
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| CDS-3UTR CCA 90 bp | GTGCTAACTCCTGGACACAGACTCTCAGTTAATCCTTTTTATCAGTCCCACATCGGATGGGAATCTGCTTaGGCTGCCGTGGGCAGAGAC | + |
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Preference number: 4 (lower is better) Translates to: VLTPGHRLSVNPFYQSHIGWESA*AAVGRD Trigger: GTCTCTGCCCACGGCAGCCCAAGCAGATTCCCATCC...GATGTGGGACTGATAAAAAGGATTAACTGAGAGTCTGTGTCCAGGAGTTAGCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000308105.5 |
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| CDS-3UTR GCA 90 bp | TCTCAGTTAATCCTTTTTATCAGTCCCACATCTCGCTACAGCCTCAGGCTACACGGTACAGCTGCCTCCTaGTGCTGGATCAACTGCAGA | + |
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Preference number: 4 (lower is better) Translates to: SQLILFISPTSRYSLRLHGTAAS*CWINCR Trigger: TCTGCAGTTGATCCAGCAGCAGGAGGCAGCTGTACC...GTGTAGCCTGAGGCTGTAGCGAGATGTGGGACTGATAAAAAGGATTAACTGAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000308105.5 |
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| CDS-3UTR GCA 90 bp | GCTACACCTGGGTTTCTCCATCCAGAGCCCCTTGAGGGTCTCCAGTGCCAGTTTTTTTCCCAACAGCGATaGAATTATTGTGCAGACACA | + |
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Preference number: 4 (lower is better) Translates to: ATPGFLHPEPLEGLQCQFFSQQR*NYCADT Trigger: TGTGTCTGCACAATAATTGCATCGCTGTTGGGAAAA...AAACTGGCACTGGAGACCCTCAAGGGGCTCTGGATGGAGAAACCCAGGTGTAGC 50% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENST00000308105.5 |
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| CDS-3UTR CCA 90 bp | GGCTTTCTTCTTGCCAAGATAGGGGTGCTAACTCCTGGACACAGACTCTCAGTTACTTGGCGGGATCACTaGGCGACGCTCAATAAATTC | + |
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Preference number: 4 (lower is better) Translates to: GFLLAKIGVLTPGHRLSVTWRDH*ATLNKF Trigger: GAATTTATTGAGCGTCGCCCAGTGATCCCGCCAAGT...AACTGAGAGTCTGTGTCCAGGAGTTAGCACCCCTATCTTGGCAAGAAGAAAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308105.5 |
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| CDS-3UTR TCA 90 bp | GTTGTCAGGCTTTCTTCTTGCCAAGATAGGGGTGCTAACTCCTGGACACAGACTTTCCTTGGTGAGCGATaGATATACTTGGCGGGATCA | + |
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Preference number: 4 (lower is better) Translates to: VVRLSSCQDRGANSWTQTFLGER*IYLAGS Trigger: TGATCCCGCCAAGTATATTCATCGCTCACCAAGGAA...AGTCTGTGTCCAGGAGTTAGCACCCCTATCTTGGCAAGAAGAAAGCCTGACAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308105.5 |
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| CDS-3UTR TCA 90 bp | GGCTTTCTTCTTGCCAAGATAGGGGTGCTAACTCCTGGACACAGACTCTCAGTTACGTCTCTTCCTTGGTaGGCGATGAATATACTTGGC | + |
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Preference number: 4 (lower is better) Translates to: GFLLAKIGVLTPGHRLSVTSLPW*AMNILG Trigger: GCCAAGTATATTCATCGCTCACCAAGGAAGAGACGT...AACTGAGAGTCTGTGTCCAGGAGTTAGCACCCCTATCTTGGCAAGAAGAAAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308105.5 |
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| CDS-3UTR CCA 90 bp | GTGCTAACTCCTGGACACAGACTCTCAGTTAATCCTTTTTATCAGTCCCACATCGGCAGTCATGATGGATaGGAATCTGCTTGGGCTGCC | + |
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Preference number: 4 (lower is better) Translates to: VLTPGHRLSVNPFYQSHIGSHDG*ESAWAA Trigger: GGCAGCCCAAGCAGATTCCCATCCATCATGACTGCC...GATGTGGGACTGATAAAAAGGATTAACTGAGAGTCTGTGTCCAGGAGTTAGCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000308105.5 |
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| CDS-3UTR CCA 90 bp | TCTCAGTTAATCCTTTTTATCAGTCCCACATCTCGCTACAGCCTCAGGCTACACAGCGATGAATATACTTaGCGGGATCACTGGGCGACG | + |
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Preference number: 4 (lower is better) Translates to: SQLILFISPTSRYSLRLHSDEYT*RDHWAT Trigger: CGTCGCCCAGTGATCCCGCCAAGTATATTCATCGCT...GTGTAGCCTGAGGCTGTAGCGAGATGTGGGACTGATAAAAAGGATTAACTGAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000308105.5 |
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| CDS-3UTR CCA 90 bp | GCTACACCTGGGTTTCTCCATCCAGAGCCCCTTGAGGGTCTCCAGTGCCAGTTTATCAATCTCATAAAATaGCAGAGAATAGTCTCGTCG | + |
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Preference number: 4 (lower is better) Translates to: ATPGFLHPEPLEGLQCQFINLIK*QRIVSS Trigger: CGACGAGACTATTCTCTGCCATTTTATGAGATTGAT...AAACTGGCACTGGAGACCCTCAAGGGGCTCTGGATGGAGAAACCCAGGTGTAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308105.5 |
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| CDS-3UTR TCA 90 bp | TCTCAGTTAATCCTTTTTATCAGTCCCACATCTCGCTACAGCCTCAGGCTACACGTAGAGCTCTGGCAGTaGATTAAGCGGTCGAGGATT | + |
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Preference number: 4 (lower is better) Translates to: SQLILFISPTSRYSLRLHVELWQ*IKRSRI Trigger: AATCCTCGACCGCTTAATTCACTGCCAGAGCTCTAC...GTGTAGCCTGAGGCTGTAGCGAGATGTGGGACTGATAAAAAGGATTAACTGAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000308105.5 |
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| CDS-3UTR TCA 90 bp | TCTCAGTTAATCCTTTTTATCAGTCCCACATCTCGCTACAGCCTCAGGCTACACTGGCTCGGCAGGCTTTaGATGTCTTCGAAGACAAAT | + |
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Preference number: 4 (lower is better) Translates to: SQLILFISPTSRYSLRLHWLGRL*MSSKTN Trigger: ATTTGTCTTCGAAGACATTCAAAGCCTGCCGAGCCA...GTGTAGCCTGAGGCTGTAGCGAGATGTGGGACTGATAAAAAGGATTAACTGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000308105.5 |
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| CDS-3UTR TCA 90 bp | GTTGTCAGGCTTTCTTCTTGCCAAGATAGGGGTGCTAACTCCTGGACACAGACTAATGATCTTCTTACCTaGTCCTGCGTATACATTGGC | + |
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Preference number: 4 (lower is better) Translates to: VVRLSSCQDRGANSWTQTNDLLT*SCVYIG Trigger: GCCAATGTATACGCAGGATCAGGTAAGAAGATCATT...AGTCTGTGTCCAGGAGTTAGCACCCCTATCTTGGCAAGAAGAAAGCCTGACAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308105.5 |
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| CDS-3UTR CCA 90 bp | CTTTTTATCAGTCCCACATCTCGCTACAGCCTCAGGCTACACCTGGGTTTCTCCGATTCAGCGAAACTGTaGCTAATTTCTGGTTCCAAT | + |
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Preference number: 4 (lower is better) Translates to: LFISPTSRYSLRLHLGFSDSAKL*LISGSN Trigger: ATTGGAACCAGAAATTAGCCACAGTTTCGCTGAATC...GGAGAAACCCAGGTGTAGCCTGAGGCTGTAGCGAGATGTGGGACTGATAAAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000308105.5 |
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| CDS-3UTR GCA 90 bp | GTGCTAACTCCTGGACACAGACTCTCAGTTAATCCTTTTTATCAGTCCCACATCGTCAGGCTTTCTTCTTaGCAAGATAGGGGTGCTAAC | + |
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Preference number: 4 (lower is better) Translates to: VLTPGHRLSVNPFYQSHIVRLSS*QDRGAN Trigger: GTTAGCACCCCTATCTTGGCAAGAAGAAAGCCTGAC...GATGTGGGACTGATAAAAAGGATTAACTGAGAGTCTGTGTCCAGGAGTTAGCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000308105.5 |
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| CDS-3UTR CCA 90 bp | CTTTTTATCAGTCCCACATCTCGCTACAGCCTCAGGCTACACCTGGGTTTCTCCATATTTTGTCTTGGGTaGAATTGTCAAGTCTATGAG | + |
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Preference number: 4 (lower is better) Translates to: LFISPTSRYSLRLHLGFSIFCLG*NCQVYE Trigger: CTCATAGACTTGACAATTCCACCCAAGACAAAATAT...GGAGAAACCCAGGTGTAGCCTGAGGCTGTAGCGAGATGTGGGACTGATAAAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000308105.5 |
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| CDS-3UTR CCA 90 bp | GTGCTAACTCCTGGACACAGACTCTCAGTTAATCCTTTTTATCAGTCCCACATCAGTCTCGTCGGTAAGTaGTTTCTTTATACCATGGCT | + |
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Preference number: 4 (lower is better) Translates to: VLTPGHRLSVNPFYQSHISLVGK*FLYTMA Trigger: AGCCATGGTATAAAGAAACCACTTACCGACGAGACT...GATGTGGGACTGATAAAAAGGATTAACTGAGAGTCTGTGTCCAGGAGTTAGCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000308105.5 |
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| CDS-3UTR GCA 90 bp | TCTCAGTTAATCCTTTTTATCAGTCCCACATCTCGCTACAGCCTCAGGCTACACGCGATGCAATTATTGTaGAGACACAATGATCTTCTT | + |
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Preference number: 4 (lower is better) Translates to: SQLILFISPTSRYSLRLHAMQLL*RHNDLL Trigger: AAGAAGATCATTGTGTCTGCACAATAATTGCATCGC...GTGTAGCCTGAGGCTGTAGCGAGATGTGGGACTGATAAAAAGGATTAACTGAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000308105.5 |
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| CDS-3UTR CCA 90 bp | TCTCAGTTAATCCTTTTTATCAGTCCCACATCTCGCTACAGCCTCAGGCTACACATCCTGCGTATACATTaGCCTAAATGTAAGATAGCT | + |
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Preference number: 4 (lower is better) Translates to: SQLILFISPTSRYSLRLHILRIH*PKCKIA Trigger: AGCTATCTTACATTTAGGCCAATGTATACGCAGGAT...GTGTAGCCTGAGGCTGTAGCGAGATGTGGGACTGATAAAAAGGATTAACTGAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000308105.5 |
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| CDS-3UTR CCA 90 bp | GTGCTAACTCCTGGACACAGACTCTCAGTTAATCCTTTTTATCAGTCCCACATCAGTGATATTTTGTCTTaGGTGGAATTGTCAAGTCTA | + |
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Preference number: 4 (lower is better) Translates to: VLTPGHRLSVNPFYQSHISDILS*VELSSL Trigger: TAGACTTGACAATTCCACCCAAGACAAAATATCACT...GATGTGGGACTGATAAAAAGGATTAACTGAGAGTCTGTGTCCAGGAGTTAGCAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000308105.5 |
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| CDS-3UTR CAA 90 bp | GTTGTCAGGCTTTCTTCTTGCCAAGATAGGGGTGCTAACTCCTGGACACAGACTTGGATGGGAATCTGCTaGGGCTGCCGTGGGCAGAGA | + |
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Preference number: 5 (lower is better) Translates to: VVRLSSCQDRGANSWTQTWMGIC*GCRGQR Trigger: TCTCTGCCCACGGCAGCCCAAGCAGATTCCCATCCA...AGTCTGTGTCCAGGAGTTAGCACCCCTATCTTGGCAAGAAGAAAGCCTGACAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308105.5 |
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| CDS-3UTR CAA 90 bp | GTGCTAACTCCTGGACACAGACTCTCAGTTAATCCTTTTTATCAGTCCCACATCTCCATCCAGAGCCCCTaGAGGGTCTCCAGTGCCAGT | + |
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Preference number: 5 (lower is better) Translates to: VLTPGHRLSVNPFYQSHISIQSP*RVSSAS Trigger: ACTGGCACTGGAGACCCTCAAGGGGCTCTGGATGGA...GATGTGGGACTGATAAAAAGGATTAACTGAGAGTCTGTGTCCAGGAGTTAGCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000308105.5 |
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| CDS-3UTR CAA 90 bp | GTTGTCAGGCTTTCTTCTTGCCAAGATAGGGGTGCTAACTCCTGGACACAGACTATGGCTCGGCAGGCTTaGAATGTCTTCGAAGACAAA | + |
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Preference number: 5 (lower is better) Translates to: VVRLSSCQDRGANSWTQTMARQA*NVFEDK Trigger: TTTGTCTTCGAAGACATTCAAAGCCTGCCGAGCCAT...AGTCTGTGTCCAGGAGTTAGCACCCCTATCTTGGCAAGAAGAAAGCCTGACAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308105.5 |
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| CDS-3UTR CAA 90 bp | GTTGTCAGGCTTTCTTCTTGCCAAGATAGGGGTGCTAACTCCTGGACACAGACTTTGAACGTCTCTTCCTaGGTGAGCGATGAATATACT | + |
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Preference number: 5 (lower is better) Translates to: VVRLSSCQDRGANSWTQTLNVSS*VSDEYT Trigger: AGTATATTCATCGCTCACCAAGGAAGAGACGTTCAA...AGTCTGTGTCCAGGAGTTAGCACCCCTATCTTGGCAAGAAGAAAGCCTGACAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308105.5 |
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| CDS CCA 90 bp | TCCAATCAATCTCATAAAATGGCAGAGAATAGTCTCGTCGGTAAGTaGTTTCTTTATACCATGGCTCGGCAGGCTTTGAATGTCTGGGAG | + |
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Preference number: 5 (lower is better) Translates to: SNQSHKMAENSLVGK*FLYTMARQALNVWE Trigger: CTCCCAGACATTCAAAGCCTGCCGAGCCATGGTATAAAGAAACCACTTACCGACGAGACTATTCTCTGCCATTTTATGAGATTGATTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000366537.5 |
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| CDS TCA 90 bp | GTCTCGTCGGTAAGTGGTTTCTTTATACCATGGCTCGGCAGGCTTTaGATGTCTTCGAAGACAAATATATCGAATGAGTGTTTGTTGGTC | + |
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Preference number: 5 (lower is better) Translates to: VSSVSGFFIPWLGRL*MSSKTNISNECLLV Trigger: GACCAACAAACACTCATTCGATATATTTGTCTTCGAAGACATTCAAAGCCTGCCGAGCCATGGTATAAAGAAACCACTTACCGACGAGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000308105.5 ENST00000470211.1 |
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| CDS CCA 90 bp | TCCAATCAATCTCATAAAATGGCAGAGAATAGTCTCGTCGGTAAGTaGTTTCTTTATACCATGGCTCGGCAGGCTTTGAATGTCTTCGAA | + |
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Preference number: 5 (lower is better) Translates to: SNQSHKMAENSLVGK*FLYTMARQALNVFE Trigger: TTCGAAGACATTCAAAGCCTGCCGAGCCATGGTATAAAGAAACCACTTACCGACGAGACTATTCTCTGCCATTTTATGAGATTGATTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000308105.5 ENST00000470211.1 |
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| CDS TCA 90 bp | ATGGCTCGGCAGGCTTTGAATGTCTTCGAAGACAAATATATCGAATaGGTGTTTGTTGGTCTAATTGAGGCTGATAGTGATATTTTGTCT | + |
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Preference number: 5 (lower is better) Translates to: MARQALNVFEDKYIE*VFVGLIEADSDILS Trigger: AGACAAAATATCACTATCAGCCTCAATTAGACCAACAAACACTCATTCGATATATTTGTCTTCGAAGACATTCAAAGCCTGCCGAGCCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308105.5 |
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| CDS CCA 72 bp | TCTCATAAAATGGCAGAGAATAGTCTCGTCGGTAAGTaGTTTCTTTATACCATGGCTCGGCAGGCTTTGAAT | + |
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Preference number: 6 (lower is better) Translates to: SHKMAENSLVGK*FLYTMARQALN Trigger: ATTCAAAGCCTGCCGAGCCATGGTATAAAGAAACCACTTACCGACGAGACTATTCTCTGCCATTTTATGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000308105.5 ENST00000366537.5 ENST00000470211.1 |
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| CDS TCA 72 bp | GTAAGTGGTTTCTTTATACCATGGCTCGGCAGGCTTTaGATGTCTTCGAAGACAAATATATCGAATGAGTGT | + |
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Preference number: 6 (lower is better) Translates to: VSGFFIPWLGRL*MSSKTNISNEC Trigger: ACACTCATTCGATATATTTGTCTTCGAAGACATTCAAAGCCTGCCGAGCCATGGTATAAAGAAACCACTTAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000308105.5 ENST00000470211.1 |
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| CDS TCA 72 bp | CAGGCTTTGAATGTCTTCGAAGACAAATATATCGAATaGGTGTTTGTTGGTCTAATTGAGGCTGATAGTGAT | + |
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Preference number: 6 (lower is better) Translates to: QALNVFEDKYIE*VFVGLIEADSD Trigger: ATCACTATCAGCCTCAATTAGACCAACAAACACTCATTCGATATATTTGTCTTCGAAGACATTCAAAGCCTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308105.5 |
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