RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for C14ORF132 (Homo sapiens)

Ensembl gene IDs: ENSG00000227051

Ensembl transcript IDs: ENST00000553764.1, ENST00000553782.1, ENST00000555004.3, ENST00000556728.1

Found 537 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGGACAATCACTGGGCATCTGCCAGGACGAAGCAAAGCGGGCCGATaGCAGCTGCAGGGAGCACAACCCACCTCGGGGCTGGGGCAGGTA +
Preference number: 1 (lower is better)
Translates to: GTITGHLPGRSKAGR*QLQGAQPTSGLGQV
Trigger: TACCTGCCCCAGCCCCGAGGTGGGTTGTGCTCCCTGCAGCTGCCATCGGCCCGCTTTGCTTCGTCCTGGCAGATGCCCAGTGATTGTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR GCA 90 bp CTCAGCCCAACCCTGGCACTTGCTCGGGGACAATCACTGGGCATCTaGCAGGACGAAGCAAAGCGGGCCGATGGCAGCTGCAGGGAGCAC +
Preference number: 1 (lower is better)
Translates to: LSPTLALARGQSLGI*QDEAKRADGSCREH
Trigger: GTGCTCCCTGCAGCTGCCATCGGCCCGCTTTGCTTCGTCCTGGCAGATGCCCAGTGATTGTCCCCGAGCAAGTGCCAGGGTTGGGCTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR TCA 90 bp GGGCAGAGAGAGAGCAGTGGGCGGGAGGTTGAGCATGTTCCACTCTaGGGACAGTCAGGGACCTGTGGAAGCCAGAGCTGGCCCAGGCCA +
Preference number: 1 (lower is better)
Translates to: GQRESSGREVEHVPL*GQSGTCGSQSWPRP
Trigger: TGGCCTGGGCCAGCTCTGGCTTCCACAGGTCCCTGACTGTCCTCAGAGTGGAACATGCTCAACCTCCCGCCCACTGCTCTCTCTCTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR GCA 90 bp TCCCTGGGCCTCCCTGTCATAGCAGCTCAGCCCAACCCTGGCACTTaGTCGGGGACAATCACTGGGCATCTGCCAGGACGAAGCAAAGCG +
Preference number: 1 (lower is better)
Translates to: SLGLPVIAAQPNPGT*SGTITGHLPGRSKA
Trigger: CGCTTTGCTTCGTCCTGGCAGATGCCCAGTGATTGTCCCCGAGCAAGTGCCAGGGTTGGGCTGAGCTGCTATGACAGGGAGGCCCAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR CCA 90 bp CATAGCAGCTCAGCCCAACCCTGGCACTTGCTCGGGGACAATCACTaGGCATCTGCCAGGACGAAGCAAAGCGGGCCGATGGCAGCTGCA +
Preference number: 1 (lower is better)
Translates to: HSSSAQPWHLLGDNH*ASARTKQSGPMAAA
Trigger: TGCAGCTGCCATCGGCCCGCTTTGCTTCGTCCTGGCAGATGCCCAGTGATTGTCCCCGAGCAAGTGCCAGGGTTGGGCTGAGCTGCTATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR CCA 90 bp GCAGAACTCCCTGGGCCTCCCTGTCATAGCAGCTCAGCCCAACCCTaGCACTTGCTCGGGGACAATCACTGGGCATCTGCCAGGACGAAG +
Preference number: 1 (lower is better)
Translates to: AELPGPPCHSSSAQP*HLLGDNHWASARTK
Trigger: CTTCGTCCTGGCAGATGCCCAGTGATTGTCCCCGAGCAAGTGCCAGGGTTGGGCTGAGCTGCTATGACAGGGAGGCCCAGGGAGTTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR GCA 90 bp GTCTCCCGACTGCCATCTCCATGGGCCATTTGGAGGCCAGGGAGCTaGCTCCTGTATCTTTACAGGGGTCAGGCCCTCCTAGGGATGTGG +
Preference number: 1 (lower is better)
Translates to: VSRLPSPWAIWRPGS*LLYLYRGQALLGMW
Trigger: CCACATCCCTAGGAGGGCCTGACCCCTGTAAAGATACAGGAGGCAGCTCCCTGGCCTCCAAATGGCCCATGGAGATGGCAGTCGGGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR TCA 90 bp TCAGGAGACGCCAGAGTGGTCTGGCCAGCCTCCAAGCCTTCCAGCTaGACCGGGGCTGGAAAAGCATCTGCTGCCTTTCCAGCGAAATGC +
Preference number: 1 (lower is better)
Translates to: SGDARVVWPASKPSS*TGAGKASAAFPAKC
Trigger: GCATTTCGCTGGAAAGGCAGCAGATGCTTTTCCAGCCCCGGTTCAGCTGGAAGGCTTGGAGGCTGGCCAGACCACTCTGGCGTCTCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR GCA 90 bp TTCTCCTCCCTTCACCGCAGCAAACACAGAACCCTGTCTCCCGACTaGCATCTCCATGGGCCATTTGGAGGCCAGGGAGCTGCCTCCTGT +
Preference number: 1 (lower is better)
Translates to: FSSLHRSKHRTLSPD*HLHGPFGGQGAASC
Trigger: ACAGGAGGCAGCTCCCTGGCCTCCAAATGGCCCATGGAGATGGCAGTCGGGAGACAGGGTTCTGTGTTTGCTGCGGTGAAGGGAGGAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR GCA 90 bp GCTGGCCCAGGCCACACCATGACGGGCATCTTGAGAAACAGCCTCTaGAGATTCAGGGCCTTGTGTAAATGTGCCCTGGAGGTGCCACCC +
Preference number: 1 (lower is better)
Translates to: AGPGHTMTGILRNSL*RFRALCKCALEVPP
Trigger: GGGTGGCACCTCCAGGGCACATTTACACAAGGCCCTGAATCTGCAGAGGCTGTTTCTCAAGATGCCCGTCATGGTGTGGCCTGGGCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR TCA 90 bp TCTTGCAGGGATCAGGCAGCAGTGCTGACAACAGACAGACTCCACTaGGCCTCTTCGGTCTCCAGGGACCCACTTCAGGAGACGCCAGAG +
Preference number: 1 (lower is better)
Translates to: SCRDQAAVLTTDRLH*ASSVSRDPLQETPE
Trigger: CTCTGGCGTCTCCTGAAGTGGGTCCCTGGAGACCGAAGAGGCTCAGTGGAGTCTGTCTGTTGTCAGCACTGCTGCCTGATCCCTGCAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR TCA 90 bp CATATCCCGAGATGGTCCATCCCAGGGGGATCACCCTGGTGGGCATaGTGCAGGGTGCCTCTAGAGCTGACAGAACTGGGTCTGAATCAC +
Preference number: 1 (lower is better)
Translates to: HIPRWSIPGGSPWWA*CRVPLELTELGLNH
Trigger: GTGATTCAGACCCAGTTCTGTCAGCTCTAGAGGCACCCTGCATCATGCCCACCAGGGTGATCCCCCTGGGATGGACCATCTCGGGATATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR GCA 90 bp GACGGGTATCTGAGCAGCCTGCCAATCTCGCACCCACCTTCAAGATaGCTGGACATTCTCCTGAGGGCAGCTTCTCAGCAACCTCCTCAG +
Preference number: 1 (lower is better)
Translates to: DGYLSSLPISHPPSR*LDILLRAASQQPPQ
Trigger: CTGAGGAGGTTGCTGAGAAGCTGCCCTCAGGAGAATGTCCAGGCATCTTGAAGGTGGGTGCGAGATTGGCAGGCTGCTCAGATACCCGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR CCA 90 bp TCACCGCAGCAAACACAGAACCCTGTCTCCCGACTGCCATCTCCATaGGCCATTTGGAGGCCAGGGAGCTGCCTCCTGTATCTTTACAGG +
Preference number: 1 (lower is better)
Translates to: SPQQTQNPVSRLPSP*AIWRPGSCLLYLYR
Trigger: CCTGTAAAGATACAGGAGGCAGCTCCCTGGCCTCCAAATGGCCCATGGAGATGGCAGTCGGGAGACAGGGTTCTGTGTTTGCTGCGGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR CCA 90 bp CTTCCAAGGAGACTTGAGTTCAGTCTTAAAGAAGGGGGCAGGCCTTaGGGACCGGCACCCCTGAAATCTGGGCAGAGAGAGAGCAGTGGG +
Preference number: 1 (lower is better)
Translates to: LPRRLEFSLKEGGRP*GPAPLKSGQRESSG
Trigger: CCCACTGCTCTCTCTCTGCCCAGATTTCAGGGGTGCCGGTCCCCAAGGCCTGCCCCCTTCTTTAAGACTGAACTCAAGTCTCCTTGGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR CCA 90 bp ATCCTGCCTGGGTCCCTGGAAGCACAAGTCCTCTTAAGACAGGCCTaGCTACAGCGGCGTCTGGCCTCTTCTCAAAGACCTTCAGTGGTG +
Preference number: 1 (lower is better)
Translates to: ILPGSLEAQVLLRQA*LQRRLASSQRPSVV
Trigger: CACCACTGAAGGTCTTTGAGAAGAGGCCAGACGCCGCTGTAGCCAGGCCTGTCTTAAGAGGACTTGTGCTTCCAGGGACCCAGGCAGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR CCA 90 bp CCTTTGCTTCCCACTGAACGCACAACGTGCTGGACCACGGACCCCTaGGCCAGGAGCCCAGACACTTGTCAGCTCTCCACTAATTTTCCA +
Preference number: 1 (lower is better)
Translates to: PLLPTERTTCWTTDP*ARSPDTCQLSTNFP
Trigger: TGGAAAATTAGTGGAGAGCTGACAAGTGTCTGGGCTCCTGGCCCAGGGGTCCGTGGTCCAGCACGTTGTGCGTTCAGTGGGAAGCAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR TCA 90 bp ATGGCCAAGGGACTGAATGTGAAACCAGAATTGGGTCAGGAACACTaGAGTTCTGAGGGCTGCTCTTGCCCCAGCACCCCACGCCCTAGG +
Preference number: 1 (lower is better)
Translates to: MAKGLNVKPELGQEH*SSEGCSCPSTPRPR
Trigger: CCTAGGGCGTGGGGTGCTGGGGCAAGAGCAGCCCTCAGAACTTCAGTGTTCCTGACCCAATTCTGGTTTCACATTCAGTCCCTTGGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR TCA 90 bp GCCTGCCAATCTCGCACCCACCTTCAAGATGCCTGGACATTCTCCTaGGGGCAGCTTCTCAGCAACCTCCTCAGGGAAGTGCTTAGTTGG +
Preference number: 1 (lower is better)
Translates to: ACQSRTHLQDAWTFS*GQLLSNLLREVLSW
Trigger: CCAACTAAGCACTTCCCTGAGGAGGTTGCTGAGAAGCTGCCCTCAGGAGAATGTCCAGGCATCTTGAAGGTGGGTGCGAGATTGGCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR TCA 90 bp CTTGGGGAGGCAGGAAATCAGCTTGAAAAAGGACCCAAGAGCAGATaGCAGCCTTGCCAAATGTCTGGATGGAGCCATCCGGGCAGGCGC +
Preference number: 1 (lower is better)
Translates to: LGEAGNQLEKGPKSR*QPCQMSGWSHPGRR
Trigger: GCGCCTGCCCGGATGGCTCCATCCAGACATTTGGCAAGGCTGTCATCTGCTCTTGGGTCCTTTTTCAAGCTGATTTCCTGCCTCCCCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR GCA 90 bp GAGACCAAGATGGGGCAACCCCGAGGAAGTCACTGTAATCTGCAATaGAGAGTGGTCGAGGCCTCCAATGCCCTGGACCATCTACTGCTC +
Preference number: 1 (lower is better)
Translates to: ETKMGQPRGSHCNLQ*RVVEASNALDHLLL
Trigger: GAGCAGTAGATGGTCCAGGGCATTGGAGGCCTCGACCACTCTGCATTGCAGATTACAGTGACTTCCTCGGGGTTGCCCCATCTTGGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR GCA 90 bp CACAGGAGACCAAGATGGGGCAACCCCGAGGAAGTCACTGTAATCTaGAATGCAGAGTGGTCGAGGCCTCCAATGCCCTGGACCATCTAC +
Preference number: 1 (lower is better)
Translates to: HRRPRWGNPEEVTVI*NAEWSRPPMPWTIY
Trigger: GTAGATGGTCCAGGGCATTGGAGGCCTCGACCACTCTGCATTGCAGATTACAGTGACTTCCTCGGGGTTGCCCCATCTTGGTCTCCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR TCA 90 bp GGTGAACATAGAACATTCAGGATCTGGCTGTTCCCTTTGGCTCCCTaGGCAGAACTCCCTGGGCCTCCCTGTCATAGCAGCTCAGCCCAA +
Preference number: 1 (lower is better)
Translates to: GEHRTFRIWLFPLAP*AELPGPPCHSSSAQ
Trigger: TTGGGCTGAGCTGCTATGACAGGGAGGCCCAGGGAGTTCTGCTCAGGGAGCCAAAGGGAACAGCCAGATCCTGAATGTTCTATGTTCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR GCA 90 bp TCATGGGAAAGGGGAAGGACAGCATTGGCTTGGAGTAGGAAGAGCTaGGCCATCATCCTGCCTGGGTCCCTGGAAGCACAAGTCCTCTTA +
Preference number: 1 (lower is better)
Translates to: SWERGRTALAWSRKS*AIILPGSLEAQVLL
Trigger: TAAGAGGACTTGTGCTTCCAGGGACCCAGGCAGGATGATGGCGCAGCTCTTCCTACTCCAAGCCAATGCTGTCCTTCCCCTTTCCCATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR CCA 90 bp AGATGGGGCAACCCCGAGGAAGTCACTGTAATCTGCAATGCAGAGTaGTCGAGGCCTCCAATGCCCTGGACCATCTACTGCTCTGACACT +
Preference number: 1 (lower is better)
Translates to: RWGNPEEVTVICNAE*SRPPMPWTIYCSDT
Trigger: AGTGTCAGAGCAGTAGATGGTCCAGGGCATTGGAGGCCTCGACCACTCTGCATTGCAGATTACAGTGACTTCCTCGGGGTTGCCCCATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR TCA 90 bp AAGAAGGAAAGTGCCATTTGTCTTGCAGGGATCAGGCAGCAGTGCTaGCAACAGACAGACTCCACTGAGCCTCTTCGGTCTCCAGGGACC +
Preference number: 1 (lower is better)
Translates to: KKESAICLAGIRQQC*QQTDSTEPLRSPGT
Trigger: GGTCCCTGGAGACCGAAGAGGCTCAGTGGAGTCTGTCTGTTGTCAGCACTGCTGCCTGATCCCTGCAAGACAAATGGCACTTTCCTTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR CCA 90 bp AGCCCAGCCTCCACCCTGCCAGTGATTCCAGGAATTCCAGACAGGTaGTCCATGTCCCTTCTCCCTCATTGTCAAGGGTCAGGTTCTTTT +
Preference number: 1 (lower is better)
Translates to: SPASTLPVIPGIPDR*SMSLLPHCQGSGSF
Trigger: AAAAGAACCTGACCCTTGACAATGAGGGAGAAGGGACATGGACCACCTGTCTGGAATTCCTGGAATCACTGGCAGGGTGGAGGCTGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR TCA 90 bp ATCACTTTCATGCTGTGTGACCTCAGGAAGGCAACTTCACTCCTCTaGGCCTCTGGTTCCTCATCTGTGCACTGGGGCGATGATGCTGTG +
Preference number: 1 (lower is better)
Translates to: ITFMLCDLRKATSLL*ASGSSSVHWGDDAV
Trigger: CACAGCATCATCGCCCCAGTGCACAGATGAGGAACCAGAGGCTCAGAGGAGTGAAGTTGCCTTCCTGAGGTCACACAGCATGAAAGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR TCA 90 bp TGTCCCTTCTCCCTCATTGTCAAGGGTCAGGTTCTTTTGCACTCGTaGCCTCCCCTTAAGCTGATGCACTGGCAGATGATATACGGTGGC +
Preference number: 1 (lower is better)
Translates to: CPFSLIVKGQVLLHS*PPLKLMHWQMIYGG
Trigger: GCCACCGTATATCATCTGCCAGTGCATCAGCTTAAGGGGAGGTCACGAGTGCAAAAGAACCTGACCCTTGACAATGAGGGAGAAGGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR CCA 90 bp GGGTCTCCCAATGCACTTGGGTCTTGGAAGGGACCAGGTGTCTGGTaGCAAAGGTGCCATTTCAAAGTCAAACTAGGAACATCCAATGGC +
Preference number: 1 (lower is better)
Translates to: GSPNALGSWKGPGVW*QRCHFKVKLGTSNG
Trigger: GCCATTGGATGTTCCTAGTTTGACTTTGAAATGGCACCTTTGCCACCAGACACCTGGTCCCTTCCAAGACCCAAGTGCATTGGGAGACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR CCA 90 bp CATGAGCAGGCACTGTCTGGAGCCAGGCTAGTAATCCTATTAACATaGCGGCTTCCAGGGAAGAGTGCCGCTTCTGGACAACTAAGATGT +
Preference number: 1 (lower is better)
Translates to: HEQALSGARLVILLT*RLPGKSAASGQLRC
Trigger: ACATCTTAGTTGTCCAGAAGCGGCACTCTTCCCTGGAAGCCGCCATGTTAATAGGATTACTAGCCTGGCTCCAGACAGTGCCTGCTCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR CCA 90 bp GTCACTGTAATCTGCAATGCAGAGTGGTCGAGGCCTCCAATGCCCTaGACCATCTACTGCTCTGACACTGAAAAGGGAGAGAGGCTTGAA +
Preference number: 1 (lower is better)
Translates to: VTVICNAEWSRPPMP*TIYCSDTEKGERLE
Trigger: TTCAAGCCTCTCTCCCTTTTCAGTGTCAGAGCAGTAGATGGTCCAGGGCATTGGAGGCCTCGACCACTCTGCATTGCAGATTACAGTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR CCA 90 bp CCTCAGATCCTGGGGGATCTGAAAGGAGCGAGAATCATTTCTCTCTaGGGGGTAGAGTGGAGCAGGGAGTCTTATTTGCCTCTTGACCTT +
Preference number: 1 (lower is better)
Translates to: PQILGDLKGARIISL*GVEWSRESYLPLDL
Trigger: AAGGTCAAGAGGCAAATAAGACTCCCTGCTCCACTCTACCCCCCAGAGAGAAATGATTCTCGCTCCTTTCAGATCCCCCAGGATCTGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR CCA 90 bp GCTTTCTCCCTCCAGTCTGGGGGTCCCCACAAATGCCCAAGATGGTaGAAACAGTCACATGGATTTCTAAGAGACCACATGACATGCTGG +
Preference number: 1 (lower is better)
Translates to: AFSLQSGGPHKCPRW*KQSHGFLRDHMTCW
Trigger: CCAGCATGTCATGTGGTCTCTTAGAAATCCATGTGACTGTTTCCACCATCTTGGGCATTTGTGGGGACCCCCAGACTGGAGGGAGAAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR TCA 90 bp TCCACGATTCCTCAGAGAAGAAACAGCATTCTCACGTGGGTGGCCTaGAGAGTCCACTGCCTGGCACATCTAGCTCTTAAAGACATCCTC +
Preference number: 1 (lower is better)
Translates to: STIPQRRNSILTWVA*RVHCLAHLALKDIL
Trigger: GAGGATGTCTTTAAGAGCTAGATGTGCCAGGCAGTGGACTCTTCAGGCCACCCACGTGAGAATGCTGTTTCTTCTCTGAGGAATCGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR TCA 90 bp GAAAACTCGATAGTTAGGTGTCCTGGGCTCAAGACCCCTGTCTCCTaGAAAGCTCCACCTGGCAACACTCTCAAGCCTCTCAGAGATTCA +
Preference number: 1 (lower is better)
Translates to: ENSIVRCPGLKTPVS*KAPPGNTLKPLRDS
Trigger: TGAATCTCTGAGAGGCTTGAGAGTGTTGCCAGGTGGAGCTTTTCAGGAGACAGGGGTCTTGAGCCCAGGACACCTAACTATCGAGTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR TCA 90 bp CCTGTGCATTGTAGGATGTTCGGTGGCATCCCTGGCCTCCACCCATaGGATACCAATAGCAGTCCCCACCAAGCTGTGAGAATCAAAAAT +
Preference number: 1 (lower is better)
Translates to: PVHCRMFGGIPGLHP*DTNSSPHQAVRIKN
Trigger: ATTTTTGATTCTCACAGCTTGGTGGGGACTGCTATTGGTATCTCATGGGTGGAGGCCAGGGATGCCACCGAACATCCTACAATGCACAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR CCA 90 bp CCTGGGTCTCCCAATGCACTTGGGTCTTGGAAGGGACCAGGTGTCTaGTGGCAAAGGTGCCATTTCAAAGTCAAACTAGGAACATCCAAT +
Preference number: 1 (lower is better)
Translates to: PGSPNALGSWKGPGV*WQRCHFKVKLGTSN
Trigger: ATTGGATGTTCCTAGTTTGACTTTGAAATGGCACCTTTGCCACCAGACACCTGGTCCCTTCCAAGACCCAAGTGCATTGGGAGACCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR TCA 90 bp TATACGGTGGCAGTGACAGATGTGATCGGTAAGAACTGGCAGCCATaGGCAGGCACTGTCTGGAGCCAGGCTAGTAATCCTATTAACATG +
Preference number: 1 (lower is better)
Translates to: YTVAVTDVIGKNWQP*AGTVWSQASNPINM
Trigger: CATGTTAATAGGATTACTAGCCTGGCTCCAGACAGTGCCTGCTCATGGCTGCCAGTTCTTACCGATCACATCTGTCACTGCCACCGTATA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR TCA 90 bp CCAACTTCCCAGATTCAAATCCTAGCTCATCACTTTCATGCTGTGTaGCCTCAGGAAGGCAACTTCACTCCTCTGAGCCTCTGGTTCCTC +
Preference number: 1 (lower is better)
Translates to: PTSQIQILAHHFHAV*PQEGNFTPLSLWFL
Trigger: GAGGAACCAGAGGCTCAGAGGAGTGAAGTTGCCTTCCTGAGGTCACACAGCATGAAAGTGATGAGCTAGGATTTGAATCTGGGAAGTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR GCA 90 bp AGCCAGGCTAGTAATCCTATTAACATGGCGGCTTCCAGGGAAGAGTaGCGCTTCTGGACAACTAAGATGTCCCTTTGCCTGTCATCAAGA +
Preference number: 1 (lower is better)
Translates to: SQASNPINMAASREE*RFWTTKMSLCLSSR
Trigger: TCTTGATGACAGGCAAAGGGACATCTTAGTTGTCCAGAAGCGGCACTCTTCCCTGGAAGCCGCCATGTTAATAGGATTACTAGCCTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR GCA 90 bp GGGCTCGGTGTGGAATGGGCTCTGATTCCCCCAATAATCGAGGCCTaGAAATTCCCTGCAAATATGCTGTGCACATCTGTCAGGATTTAT +
Preference number: 1 (lower is better)
Translates to: GLGVEWALIPPIIEA*KFPANMLCTSVRIY
Trigger: ATAAATCCTGACAGATGTGCACAGCATATTTGCAGGGAATTTGCAGGCCTCGATTATTGGGGGAATCAGAGCCCATTCCACACCGAGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR CCA 90 bp CATGGAGACATCCATCTGTTAAAGATCTTGCTTATGGGGCAGACCTaGGGTTTGATGGAGAGAGACTTGCTGGAGACAGAGCCATTCACG +
Preference number: 1 (lower is better)
Translates to: HGDIHLLKILLMGQT*GLMERDLLETEPFT
Trigger: CGTGAATGGCTCTGTCTCCAGCAAGTCTCTCTCCATCAAACCCCAGGTCTGCCCCATAAGCAAGATCTTTAACAGATGGATGTCTCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR GCA 90 bp AATGCACTTGGGTCTTGGAAGGGACCAGGTGTCTGGTGGCAAAGGTaGCATTTCAAAGTCAAACTAGGAACATCCAATGGCCCTACTAGA +
Preference number: 1 (lower is better)
Translates to: NALGSWKGPGVWWQR*HFKVKLGTSNGPTR
Trigger: TCTAGTAGGGCCATTGGATGTTCCTAGTTTGACTTTGAAATGGCACCTTTGCCACCAGACACCTGGTCCCTTCCAAGACCCAAGTGCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR CCA 90 bp TGCTTGCCAGGACCCCAGATGCTGATATTTCAGAATTTAAGGAAGTaGCTTGGGCAGAAGCACTTTCACAGCTTCAGGAGAATGCACGGT +
Preference number: 1 (lower is better)
Translates to: CLPGPQMLIFQNLRK*LGQKHFHSFRRMHG
Trigger: ACCGTGCATTCTCCTGAAGCTGTGAAAGTGCTTCTGCCCAAGCCACTTCCTTAAATTCTGAAATATCAGCATCTGGGGTCCTGGCAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR CCA 90 bp TTATCCAGATTTTTCAGAGAGGTCCCTTTTCCTGCTTGGAAGCTGTaGGCTCTGTCCTCTGGGTTCTCAGTACTCAGTTCAACCACCTTC +
Preference number: 1 (lower is better)
Translates to: LSRFFREVPFPAWKL*ALSSGFSVLSSTTF
Trigger: GAAGGTGGTTGAACTGAGTACTGAGAACCCAGAGGACAGAGCCCACAGCTTCCAAGCAGGAAAAGGGACCTCTCTGAAAAATCTGGATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR GCA 90 bp GTGATAATTCTGGTTATCCAGATTTTTCAGAGAGGTCCCTTTTCCTaGTTGGAAGCTGTGGGCTCTGTCCTCTGGGTTCTCAGTACTCAG +
Preference number: 1 (lower is better)
Translates to: VIILVIQIFQRGPFS*LEAVGSVLWVLSTQ
Trigger: CTGAGTACTGAGAACCCAGAGGACAGAGCCCACAGCTTCCAAGCAGGAAAAGGGACCTCTCTGAAAAATCTGGATAACCAGAATTATCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR GCA 90 bp GGAATGGGCTCTGATTCCCCCAATAATCGAGGCCTGCAAATTCCCTaGAAATATGCTGTGCACATCTGTCAGGATTTATTTCCAAGGCAG +
Preference number: 1 (lower is better)
Translates to: GMGSDSPNNRGLQIP*KYAVHICQDLFPRQ
Trigger: CTGCCTTGGAAATAAATCCTGACAGATGTGCACAGCATATTTGCAGGGAATTTGCAGGCCTCGATTATTGGGGGAATCAGAGCCCATTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR CCA 90 bp CAAATATGCTGTGCACATCTGTCAGGATTTATTTCCAAGGCAGAATaGGGCTCAAACCTCCTCTTGGGGAGGCAGGAAATCAGCTTGAAA +
Preference number: 1 (lower is better)
Translates to: QICCAHLSGFISKAE*GSNLLLGRQEISLK
Trigger: TTTCAAGCTGATTTCCTGCCTCCCCAAGAGGAGGTTTGAGCCCCATTCTGCCTTGGAAATAAATCCTGACAGATGTGCACAGCATATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR CCA 90 bp TGCATTGTTGGGACAACGCTTCGAACGGCAAACGCAGTAATGGTGTaGTTCTTTAAGAAACTGGGAGAAAGACAGCCAGTGAGACAGATA +
Preference number: 1 (lower is better)
Translates to: CIVGTTLRTANAVMV*FFKKLGERQPVRQI
Trigger: TATCTGTCTCACTGGCTGTCTTTCTCCCAGTTTCTTAAAGAACCACACCATTACTGCGTTTGCCGTTCGAAGCGTTGTCCCAACAATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR CCA 90 bp TGGTGGAAACAGTCACATGGATTTCTAAGAGACCACATGACATGCTaGGAGTTGCAGATCACTGTCCTCAGCTCGCATTATTTGAACGCA +
Preference number: 1 (lower is better)
Translates to: WWKQSHGFLRDHMTC*ELQITVLSSHYLNA
Trigger: TGCGTTCAAATAATGCGAGCTGAGGACAGTGATCTGCAACTCCCAGCATGTCATGTGGTCTCTTAGAAATCCATGTGACTGTTTCCACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR GCA 90 bp ATTCCCCCAATAATCGAGGCCTGCAAATTCCCTGCAAATATGCTGTaGACATCTGTCAGGATTTATTTCCAAGGCAGAATGGGGCTCAAA +
Preference number: 1 (lower is better)
Translates to: IPPIIEACKFPANML*TSVRIYFQGRMGLK
Trigger: TTTGAGCCCCATTCTGCCTTGGAAATAAATCCTGACAGATGTGCACAGCATATTTGCAGGGAATTTGCAGGCCTCGATTATTGGGGGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR GCA 90 bp AGATGGTGGAAACAGTCACATGGATTTCTAAGAGACCACATGACATaGTGGGAGTTGCAGATCACTGTCCTCAGCTCGCATTATTTGAAC +
Preference number: 1 (lower is better)
Translates to: RWWKQSHGFLRDHMT*WELQITVLSSHYLN
Trigger: GTTCAAATAATGCGAGCTGAGGACAGTGATCTGCAACTCCCAGCATGTCATGTGGTCTCTTAGAAATCCATGTGACTGTTTCCACCATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR TCA 90 bp CATTCTGCTTCTGGCAGTAACTGTTTTCTCGCTCCAGGGAGTCTTTaGTCGTCTTCAGTCATGAAGATTTGCATTGTTTTGTCCTTTGTC +
Preference number: 1 (lower is better)
Translates to: HSASGSNCFLAPGSL*SSSVMKICIVLSFV
Trigger: GACAAAGGACAAAACAATGCAAATCTTCATGACTGAAGACGATCAAAGACTCCCTGGAGCGAGAAAACAGTTACTGCCAGAAGCAGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR TCA 90 bp CACGCCCTAGGTTCGATAAGTTTGCATAAAAACAAGACACACGAGTaGTTATTTACCACCAGCAAGCGATCATCAAATCATGTCTATGTT +
Preference number: 1 (lower is better)
Translates to: HALGSISLHKNKTHE*LFTTSKRSSNHVYV
Trigger: AACATAGACATGATTTGATGATCGCTTGCTGGTGGTAAATAATCACTCGTGTGTCTTGTTTTTATGCAAACTTATCGAACCTAGGGCGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR TCA 90 bp CTTCCTAACCAGCTTTTTAAGTTTCTCCACTACAGAGGGTGTTATTaGCACAATTCTTCTGTTTTTGCAGTGTATAAAGTGAGGAGAAAG +
Preference number: 1 (lower is better)
Translates to: LPNQLFKFLHYRGCY*HNSSVFAVYKVRRK
Trigger: CTTTCTCCTCACTTTATACACTGCAAAAACAGAAGAATTGTGTCAATAACACCCTCTGTAGTGGAGAAACTTAAAAAGCTGGTTAGGAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR-3UTR TCA 90 bp CCCGAGATGGTCCATCCCAGGGGGATCACCCTGGTGGGCATGATGCAGGGTGCCGGAACACTGAAGTTCTaGGGGCTGCTCTTGCCCCAG +
Preference number: 2 (lower is better)
Translates to: PEMVHPRGITLVGMMQGAGTLKF*GLLLPQ
Trigger: CTGGGGCAAGAGCAGCCCTCAGAACTTCAGTGTTCC...GGCACCCTGCATCATGCCCACCAGGGTGATCCCCCTGGGATGGACCATCTCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR CAA 90 bp CTCCCTGGGCCTCCCTGTCATAGCAGCTCAGCCCAACCCTGGCACTaGCTCGGGGACAATCACTGGGCATCTGCCAGGACGAAGCAAAGC +
Preference number: 2 (lower is better)
Translates to: LPGPPCHSSSAQPWH*LGDNHWASARTKQS
Trigger: GCTTTGCTTCGTCCTGGCAGATGCCCAGTGATTGTCCCCGAGCAAGTGCCAGGGTTGGGCTGAGCTGCTATGACAGGGAGGCCCAGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR-3UTR GCA 90 bp CCCGAGATGGTCCATCCCAGGGGGATCACCCTGGTGGGCATGATGCAGGGTGCCACGGGTGTGAGTCACTaGACCCAGCCTAAGTTGCTC +
Preference number: 2 (lower is better)
Translates to: PEMVHPRGITLVGMMQGATGVSH*TQPKLL
Trigger: GAGCAACTTAGGCTGGGTGCAGTGACTCACACCCGT...GGCACCCTGCATCATGCCCACCAGGGTGATCCCCCTGGGATGGACCATCTCGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR-3UTR CCA 90 bp AGCCCAACCCTGGCACTTGCTCGGGGACAATCACTGGGCATCTGCCAGGACGAACTTCTGCTGGGCTCCTaGGTGTTGGCCAGGGAGGGT +
Preference number: 2 (lower is better)
Translates to: SPTLALARGQSLGICQDELLLGS*VLAREG
Trigger: ACCCTCCCTGGCCAACACCCAGGAGCCCAGCAGAAG...TTCGTCCTGGCAGATGCCCAGTGATTGTCCCCGAGCAAGTGCCAGGGTTGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR-3UTR CCA 90 bp AGCCCAACCCTGGCACTTGCTCGGGGACAATCACTGGGCATCTGCCAGGACGAACGACTGCCATCTCCATaGGCCATTTGGAGGCCAGGG +
Preference number: 2 (lower is better)
Translates to: SPTLALARGQSLGICQDERLPSP*AIWRPG
Trigger: CCCTGGCCTCCAAATGGCCCATGGAGATGGCAGTCG...TTCGTCCTGGCAGATGCCCAGTGATTGTCCCCGAGCAAGTGCCAGGGTTGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR-3UTR TCA 90 bp GAGGTTCTGGAACTGATAAATCCCTGTGCACTGCCGCCTGCCCCTTTCCTGGACCCCCAATCTGCCCTCTaGAGGCCTTGCCCCGTCATG +
Preference number: 2 (lower is better)
Translates to: EVLELINPCALPPAPFLDPQSAL*RPCPVM
Trigger: CATGACGGGGCAAGGCCTTCAGAGGGCAGATTGGGG...GTCCAGGAAAGGGGCAGGCGGCAGTGCACAGGGATTTATCAGTTCCAGAACCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR-3UTR TCA 90 bp CCCGAGATGGTCCATCCCAGGGGGATCACCCTGGTGGGCATGATGCAGGGTGCCGTTCTTTTGCACTCGTaGCCTCCCCTTAAGCTGATG +
Preference number: 2 (lower is better)
Translates to: PEMVHPRGITLVGMMQGAVLLHS*PPLKLM
Trigger: CATCAGCTTAAGGGGAGGTCACGAGTGCAAAAGAAC...GGCACCCTGCATCATGCCCACCAGGGTGATCCCCCTGGGATGGACCATCTCGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR-3UTR CCA 90 bp CCCGAGATGGTCCATCCCAGGGGGATCACCCTGGTGGGCATGATGCAGGGTGCCCTTAAGCTGATGCACTaGCAGATGATATACGGTGGC +
Preference number: 2 (lower is better)
Translates to: PEMVHPRGITLVGMMQGALKLMH*QMIYGG
Trigger: GCCACCGTATATCATCTGCCAGTGCATCAGCTTAAG...GGCACCCTGCATCATGCCCACCAGGGTGATCCCCCTGGGATGGACCATCTCGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR-3UTR CCA 90 bp GAAGGACAGCATTGGCTTGGAGTAGGAAGAGCTGCGCCATCATCCTGCCTGGGTACAGTCAGGGACCTGTaGAAGCCAGAGCTGGCCCAG +
Preference number: 2 (lower is better)
Translates to: EGQHWLGVGRAAPSSCLGTVRDL*KPELAQ
Trigger: CTGGGCCAGCTCTGGCTTCCACAGGTCCCTGACTGT...ACCCAGGCAGGATGATGGCGCAGCTCTTCCTACTCCAAGCCAATGCTGTCCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR-3UTR TCA 90 bp CCCGAGATGGTCCATCCCAGGGGGATCACCCTGGTGGGCATGATGCAGGGTGCCTACTTCCATGTCTTCTaGCTCAGCTTGACCACAACA +
Preference number: 2 (lower is better)
Translates to: PEMVHPRGITLVGMMQGAYFHVF*LSLTTT
Trigger: TGTTGTGGTCAAGCTGAGTCAGAAGACATGGAAGTA...GGCACCCTGCATCATGCCCACCAGGGTGATCCCCCTGGGATGGACCATCTCGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR-3UTR TCA 90 bp GAGGTTCTGGAACTGATAAATCCCTGTGCACTGCCGCCTGCCCCTTTCCTGGACCCTGTGTCAGCCTCCTaGGTAGCTGGGATTACAGGC +
Preference number: 2 (lower is better)
Translates to: EVLELINPCALPPAPFLDPVSAS*VAGITG
Trigger: GCCTGTAATCCCAGCTACTCAGGAGGCTGACACAGG...GTCCAGGAAAGGGGCAGGCGGCAGTGCACAGGGATTTATCAGTTCCAGAACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR-3UTR GCA 90 bp ACTTCTGGCTGTAGTGAGCCTCTTTCTACGTGTGGGTGCTTCTGCTGGGCTCCTAGGCAGGAGGGAGAGTaGAGCTCGCTGTGGCCAGAA +
Preference number: 2 (lower is better)
Translates to: TSGCSEPLSTCGCFCWAPRQEGE*SSLWPE
Trigger: TTCTGGCCACAGCGAGCTGCACTCTCCCTCCTGCCT...AGGAGCCCAGCAGAAGCACCCACACGTAGAAAGAGGCTCACTACAGCCAGAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR-3UTR TCA 90 bp CTCGCATTATTTGAACGCAGGGCAGTGACCATGATCACTGCTGCTGCTCAGAAGCTCCATCCCTCTCCGTaGGTGACCATGGTCAGGGGC +
Preference number: 2 (lower is better)
Translates to: LALFERRAVTMITAAAQKLHPSP*VTMVRG
Trigger: GCCCCTGACCATGGTCACTCACGGAGAGGGATGGAG...CTTCTGAGCAGCAGCAGTGATCATGGTCACTGCCCTGCGTTCAAATAATGCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR-3UTR GCA 90 bp GAGGTTCTGGAACTGATAAATCCCTGTGCACTGCCGCCTGCCCCTTTCCTGGACCTCCATAGGGAAAACTaGAGCCAGAAGCACCCGGTG +
Preference number: 2 (lower is better)
Translates to: EVLELINPCALPPAPFLDLHREN*SQKHPV
Trigger: CACCGGGTGCTTCTGGCTGCAGTTTTCCCTATGGAG...GTCCAGGAAAGGGGCAGGCGGCAGTGCACAGGGATTTATCAGTTCCAGAACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR-3UTR GCA 90 bp ACTTCTGGCTGTAGTGAGCCTCTTTCTACGTGTGGGTGCTTCTGCTGGGCTCCTGGTCGAGGCCTCCAATaGCCTGGACCATCTACTGCT +
Preference number: 2 (lower is better)
Translates to: TSGCSEPLSTCGCFCWAPGRGLQ*PGPSTA
Trigger: AGCAGTAGATGGTCCAGGGCATTGGAGGCCTCGACC...AGGAGCCCAGCAGAAGCACCCACACGTAGAAAGAGGCTCACTACAGCCAGAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR-3UTR CCA 90 bp GAAGGACAGCATTGGCTTGGAGTAGGAAGAGCTGCGCCATCATCCTGCCTGGGTCCACTCTATCTGCACTaGGATGCTGCCTTGGGAAGG +
Preference number: 2 (lower is better)
Translates to: EGQHWLGVGRAAPSSCLGPLYLH*DAALGR
Trigger: CCTTCCCAAGGCAGCATCCCAGTGCAGATAGAGTGG...ACCCAGGCAGGATGATGGCGCAGCTCTTCCTACTCCAAGCCAATGCTGTCCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR-3UTR TCA 90 bp AGCCCAACCCTGGCACTTGCTCGGGGACAATCACTGGGCATCTGCCAGGACGAAACAACATGGGATATTTaGAATCAGGGCTGCTGGGGA +
Preference number: 2 (lower is better)
Translates to: SPTLALARGQSLGICQDETTWDI*NQGCWG
Trigger: TCCCCAGCAGCCCTGATTTCAAATATCCCATGTTGT...TTCGTCCTGGCAGATGCCCAGTGATTGTCCCCGAGCAAGTGCCAGGGTTGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR-3UTR TCA 90 bp GGATTTATTTCCAAGGCAGAATGGGGCTCAAACCTCCTCTTGGGGAGGCAGGAAATCCCTCTCCGTGAGTaGCCATGGTCAGGGGCCTGT +
Preference number: 2 (lower is better)
Translates to: GFISKAEWGSNLLLGRQEIPLRE*PWSGAC
Trigger: ACAGGCCCCTGACCATGGTCACTCACGGAGAGGGAT...TTCCTGCCTCCCCAAGAGGAGGTTTGAGCCCCATTCTGCCTTGGAAATAAATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR-3UTR GCA 90 bp ACTTCTGGCTGTAGTGAGCCTCTTTCTACGTGTGGGTGCTTCTGCTGGGCTCCTACCCTGTCTCCCGACTaGCATCTCCATGGGCCATTT +
Preference number: 2 (lower is better)
Translates to: TSGCSEPLSTCGCFCWAPTLSPD*HLHGPF
Trigger: AAATGGCCCATGGAGATGGCAGTCGGGAGACAGGGT...AGGAGCCCAGCAGAAGCACCCACACGTAGAAAGAGGCTCACTACAGCCAGAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR-3UTR CCA 90 bp CTCGCATTATTTGAACGCAGGGCAGTGACCATGATCACTGCTGCTGCTCAGAAGGAAGCACCCGGTGCCTaGGATGCTGGAGTCCTCTTC +
Preference number: 2 (lower is better)
Translates to: LALFERRAVTMITAAAQKEAPGA*DAGVLF
Trigger: GAAGAGGACTCCAGCATCCCAGGCACCGGGTGCTTC...CTTCTGAGCAGCAGCAGTGATCATGGTCACTGCCCTGCGTTCAAATAATGCGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR-3UTR GCA 90 bp CTCGCATTATTTGAACGCAGGGCAGTGACCATGATCACTGCTGCTGCTCAGAAGCAAGGATCCCCAATCTaGCCTCTGAAGGCCTTGCCC +
Preference number: 2 (lower is better)
Translates to: LALFERRAVTMITAAAQKQGSPI*PLKALP
Trigger: GGGCAAGGCCTTCAGAGGGCAGATTGGGGATCCTTG...CTTCTGAGCAGCAGCAGTGATCATGGTCACTGCCCTGCGTTCAAATAATGCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR-3UTR GCA 90 bp AGCCCAACCCTGGCACTTGCTCGGGGACAATCACTGGGCATCTGCCAGGACGAAACAGCTTCAGGAGAATaGACGGTATCCACACTGAAT +
Preference number: 2 (lower is better)
Translates to: SPTLALARGQSLGICQDETASGE*TVSTLN
Trigger: ATTCAGTGTGGATACCGTGCATTCTCCTGAAGCTGT...TTCGTCCTGGCAGATGCCCAGTGATTGTCCCCGAGCAAGTGCCAGGGTTGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR-3UTR GCA 90 bp CTCGCATTATTTGAACGCAGGGCAGTGACCATGATCACTGCTGCTGCTCAGAAGGGGAGGGTCCCCTTCTaGCTGCATCCCAAGAAAACC +
Preference number: 2 (lower is better)
Translates to: LALFERRAVTMITAAAQKGRVPF*LHPKKT
Trigger: GGTTTTCTTGGGATGCAGGCAGAAGGGGACCCTCCC...CTTCTGAGCAGCAGCAGTGATCATGGTCACTGCCCTGCGTTCAAATAATGCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR-3UTR CCA 90 bp CTCGCATTATTTGAACGCAGGGCAGTGACCATGATCACTGCTGCTGCTCAGAAGGCCTCTTTCTACGTGTaGGTGCTTCTGCTGGGCTCC +
Preference number: 2 (lower is better)
Translates to: LALFERRAVTMITAAAQKASFYV*VLLLGS
Trigger: GGAGCCCAGCAGAAGCACCCACACGTAGAAAGAGGC...CTTCTGAGCAGCAGCAGTGATCATGGTCACTGCCCTGCGTTCAAATAATGCGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR-3UTR CCA 90 bp GAAGGACAGCATTGGCTTGGAGTAGGAAGAGCTGCGCCATCATCCTGCCTGGGTCCTTGCAGAACAAGATaGTCCCAGGACTCTGACTCT +
Preference number: 2 (lower is better)
Translates to: EGQHWLGVGRAAPSSCLGPCRTR*SQDSDS
Trigger: AGAGTCAGAGTCCTGGGACCATCTTGTTCTGCAAGG...ACCCAGGCAGGATGATGGCGCAGCTCTTCCTACTCCAAGCCAATGCTGTCCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR-3UTR CCA 90 bp GGATTTATTTCCAAGGCAGAATGGGGCTCAAACCTCCTCTTGGGGAGGCAGGAACTCGGGGACAATCACTaGGCATCTGCCAGGACGAAG +
Preference number: 2 (lower is better)
Translates to: GFISKAEWGSNLLLGRQELGDNH*ASARTK
Trigger: CTTCGTCCTGGCAGATGCCCAGTGATTGTCCCCGAG...TTCCTGCCTCCCCAAGAGGAGGTTTGAGCCCCATTCTGCCTTGGAAATAAATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR-3UTR CCA 90 bp CTCGCATTATTTGAACGCAGGGCAGTGACCATGATCACTGCTGCTGCTCAGAAGGTTCGGTGGCATCCCTaGCCTCCACCCATGAGATAC +
Preference number: 2 (lower is better)
Translates to: LALFERRAVTMITAAAQKVRWHP*PPPMRY
Trigger: GTATCTCATGGGTGGAGGCCAGGGATGCCACCGAAC...CTTCTGAGCAGCAGCAGTGATCATGGTCACTGCCCTGCGTTCAAATAATGCGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR CAA 90 bp ATTTGCCTCTTGACCTTGATTTCATGGGAAAGGGGAAGGACAGCATaGGCTTGGAGTAGGAAGAGCTGCGCCATCATCCTGCCTGGGTCC +
Preference number: 2 (lower is better)
Translates to: ICLLTLISWERGRTA*AWSRKSCAIILPGS
Trigger: GGACCCAGGCAGGATGATGGCGCAGCTCTTCCTACTCCAAGCCAATGCTGTCCTTCCCCTTTCCCATGAAATCAAGGTCAAGAGGCAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR-3UTR TCA 90 bp CTCGCATTATTTGAACGCAGGGCAGTGACCATGATCACTGCTGCTGCTCAGAAGGAGCATGTTCCACTCTaGGGACAGTCAGGGACCTGT +
Preference number: 2 (lower is better)
Translates to: LALFERRAVTMITAAAQKEHVPL*GQSGTC
Trigger: ACAGGTCCCTGACTGTCCTCAGAGTGGAACATGCTC...CTTCTGAGCAGCAGCAGTGATCATGGTCACTGCCCTGCGTTCAAATAATGCGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR-3UTR GCA 90 bp AGAGAAGTCAGTGATCGCATGGTGAAACCAGGTGCTTGGGTAGCAAAGGACTCCCAAGTCAGAGCTACGTaGCAAGCCTCACCCCATGGT +
Preference number: 2 (lower is better)
Translates to: REVSDRMVKPGAWVAKDSQVRAT*QASPHG
Trigger: ACCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTG...GGAGTCCTTTGCTACCCAAGCACCTGGTTTCACCATGCGATCACTGACTTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR-3UTR GCA 90 bp CCAGTGATTCCAGGAATTCCAGACAGGTGGTCCATGTCCCTTCTCCCTCATTGTACCTCCTCAGGGAAGTaGTTAGTTGGGGCAGAGAGC +
Preference number: 2 (lower is better)
Translates to: PVIPGIPDRWSMSLLPHCTSSGK*LVGAES
Trigger: GCTCTCTGCCCCAACTAAGCACTTCCCTGAGGAGGT...ACAATGAGGGAGAAGGGACATGGACCACCTGTCTGGAATTCCTGGAATCACTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR-3UTR GCA 90 bp CCAGTGATTCCAGGAATTCCAGACAGGTGGTCCATGTCCCTTCTCCCTCATTGTCTATCTGCACTGGGATaGTGCCTTGGGAAGGTGTGG +
Preference number: 2 (lower is better)
Translates to: PVIPGIPDRWSMSLLPHCLSALG*CLGKVW
Trigger: CCACACCTTCCCAAGGCAGCATCCCAGTGCAGATAG...ACAATGAGGGAGAAGGGACATGGACCACCTGTCTGGAATTCCTGGAATCACTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR-3UTR GCA 90 bp GGATTTATTTCCAAGGCAGAATGGGGCTCAAACCTCCTCTTGGGGAGGCAGGAAAGCCTGGGGTCACCTTaGAGAACAAGATGGTCCCAG +
Preference number: 2 (lower is better)
Translates to: GFISKAEWGSNLLLGRQESLGSP*RTRWSQ
Trigger: CTGGGACCATCTTGTTCTGCAAGGTGACCCCAGGCT...TTCCTGCCTCCCCAAGAGGAGGTTTGAGCCCCATTCTGCCTTGGAAATAAATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR CAA 90 bp GATTCCAGGAATTCCAGACAGGTGGTCCATGTCCCTTCTCCCTCATaGTCAAGGGTCAGGTTCTTTTGCACTCGTGACCTCCCCTTAAGC +
Preference number: 2 (lower is better)
Translates to: DSRNSRQVVHVPSPS*SRVRFFCTRDLPLS
Trigger: GCTTAAGGGGAGGTCACGAGTGCAAAAGAACCTGACCCTTGACAATGAGGGAGAAGGGACATGGACCACCTGTCTGGAATTCCTGGAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR-3UTR TCA 90 bp CCAGTGATTCCAGGAATTCCAGACAGGTGGTCCATGTCCCTTCTCCCTCATTGTTTGGGTCAGGAACACTaGAGTTCTGAGGGCTGCTCT +
Preference number: 2 (lower is better)
Translates to: PVIPGIPDRWSMSLLPHCLGQEH*SSEGCS
Trigger: AGAGCAGCCCTCAGAACTTCAGTGTTCCTGACCCAA...ACAATGAGGGAGAAGGGACATGGACCACCTGTCTGGAATTCCTGGAATCACTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR-3UTR TCA 90 bp GAGGTTCTGGAACTGATAAATCCCTGTGCACTGCCGCCTGCCCCTTTCCTGGACACAAAACTTAAGCAGTaGGGACCGGCATCTTTTTCC +
Preference number: 2 (lower is better)
Translates to: EVLELINPCALPPAPFLDTKLKQ*GPASFS
Trigger: GGAAAAAGATGCCGGTCCTCACTGCTTAAGTTTTGT...GTCCAGGAAAGGGGCAGGCGGCAGTGCACAGGGATTTATCAGTTCCAGAACCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR-3UTR GCA 90 bp CCAGTGATTCCAGGAATTCCAGACAGGTGGTCCATGTCCCTTCTCCCTCATTGTACTTGGAAGCTTCCTTaGTTGCCAGGACCCCAGATG +
Preference number: 2 (lower is better)
Translates to: PVIPGIPDRWSMSLLPHCTWKLP*LPGPQM
Trigger: CATCTGGGGTCCTGGCAAGCAAGGAAGCTTCCAAGT...ACAATGAGGGAGAAGGGACATGGACCACCTGTCTGGAATTCCTGGAATCACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR-3UTR GCA 90 bp CTCGCATTATTTGAACGCAGGGCAGTGACCATGATCACTGCTGCTGCTCAGAAGCTTTCCCACTCTATCTaGACTGGGATGCTGCCTTGG +
Preference number: 2 (lower is better)
Translates to: LALFERRAVTMITAAAQKLSHSI*TGMLPW
Trigger: CCAAGGCAGCATCCCAGTGCAGATAGAGTGGGAAAG...CTTCTGAGCAGCAGCAGTGATCATGGTCACTGCCCTGCGTTCAAATAATGCGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR-3UTR GCA 90 bp GGATTTATTTCCAAGGCAGAATGGGGCTCAAACCTCCTCTTGGGGAGGCAGGAACACTGTAATCTGCAATaGAGAGTGGTCGAGGCCTCC +
Preference number: 2 (lower is better)
Translates to: GFISKAEWGSNLLLGRQEHCNLQ*RVVEAS
Trigger: GGAGGCCTCGACCACTCTGCATTGCAGATTACAGTG...TTCCTGCCTCCCCAAGAGGAGGTTTGAGCCCCATTCTGCCTTGGAAATAAATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR-3UTR CCA 90 bp CCAGTGATTCCAGGAATTCCAGACAGGTGGTCCATGTCCCTTCTCCCTCATTGTAAGGGACCAGGTGTCTaGTGGCAAAGGTGCCATTTC +
Preference number: 2 (lower is better)
Translates to: PVIPGIPDRWSMSLLPHCKGPGV*WQRCHF
Trigger: GAAATGGCACCTTTGCCACCAGACACCTGGTCCCTT...ACAATGAGGGAGAAGGGACATGGACCACCTGTCTGGAATTCCTGGAATCACTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR-3UTR CCA 90 bp GGATTTATTTCCAAGGCAGAATGGGGCTCAAACCTCCTCTTGGGGAGGCAGGAAAATGCACTTGGGTCTTaGAAGGGACCAGGTGTCTGG +
Preference number: 2 (lower is better)
Translates to: GFISKAEWGSNLLLGRQENALGS*KGPGVW
Trigger: CCAGACACCTGGTCCCTTCCAAGACCCAAGTGCATT...TTCCTGCCTCCCCAAGAGGAGGTTTGAGCCCCATTCTGCCTTGGAAATAAATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR CAA 90 bp GACATCCATCTGTTAAAGATCTTGCTTATGGGGCAGACCTGGGGTTaGATGGAGAGAGACTTGCTGGAGACAGAGCCATTCACGCACACC +
Preference number: 2 (lower is better)
Translates to: DIHLLKILLMGQTWG*MERDLLETEPFTHT
Trigger: GGTGTGCGTGAATGGCTCTGTCTCCAGCAAGTCTCTCTCCATCAAACCCCAGGTCTGCCCCATAAGCAAGATCTTTAACAGATGGATGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR-3UTR GCA 90 bp GGATTTATTTCCAAGGCAGAATGGGGCTCAAACCTCCTCTTGGGGAGGCAGGAAAGGGTCAGGTTCTTTTaGACTCGTGACCTCCCCTTA +
Preference number: 2 (lower is better)
Translates to: GFISKAEWGSNLLLGRQERVRFF*TRDLPL
Trigger: TAAGGGGAGGTCACGAGTGCAAAAGAACCTGACCCT...TTCCTGCCTCCCCAAGAGGAGGTTTGAGCCCCATTCTGCCTTGGAAATAAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR-3UTR GCA 90 bp GAGGTTCTGGAACTGATAAATCCCTGTGCACTGCCGCCTGCCCCTTTCCTGGACGGGATTACAGGCACATaGCACAATGTCTGGTTAATT +
Preference number: 2 (lower is better)
Translates to: EVLELINPCALPPAPFLDGITGT*HNVWLI
Trigger: AATTAACCAGACATTGTGGCATGTGCCTGTAATCCC...GTCCAGGAAAGGGGCAGGCGGCAGTGCACAGGGATTTATCAGTTCCAGAACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR-3UTR CCA 90 bp AAGCACTTTCACAGCTTCAGGAGAATGCACGGTATCCACACTGAATGTAAAGGAGACGGCCGCCGCCCCTaGTCAAAACTCCTGGTTCTA +
Preference number: 2 (lower is better)
Translates to: KHFHSFRRMHGIHTECKGDGRRP*SKLLVL
Trigger: TAGAACCAGGAGTTTTGACCAGGGGCGGCGGCCGTC...TCCTTTACATTCAGTGTGGATACCGTGCATTCTCCTGAAGCTGTGAAAGTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR-3UTR CCA 90 bp ACTTCTGGCTGTAGTGAGCCTCTTTCTACGTGTGGGTGCTTCTGCTGGGCTCCTCTGGTCCCATGTTCCTaGAATGTAGTTTCAAGGATC +
Preference number: 2 (lower is better)
Translates to: TSGCSEPLSTCGCFCWAPLVPCS*NVVSRI
Trigger: GATCCTTGAAACTACATTCCAGGAACATGGGACCAG...AGGAGCCCAGCAGAAGCACCCACACGTAGAAAGAGGCTCACTACAGCCAGAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR-3UTR GCA 90 bp AAGCACTTTCACAGCTTCAGGAGAATGCACGGTATCCACACTGAATGTAAAGGACCCTGGGTCTCCCAATaGACTTGGGTCTTGGAAGGG +
Preference number: 2 (lower is better)
Translates to: KHFHSFRRMHGIHTECKGPWVSQ*TWVLEG
Trigger: CCCTTCCAAGACCCAAGTGCATTGGGAGACCCAGGG...TCCTTTACATTCAGTGTGGATACCGTGCATTCTCCTGAAGCTGTGAAAGTGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR-3UTR GCA 90 bp TGGTGGAAACAGTCACATGGATTTCTAAGAGACCACATGACATGCTGGGAGTTGTGGAGGCCAGGGAGCTaGCTCCTGTATCTTTACAGG +
Preference number: 2 (lower is better)
Translates to: WWKQSHGFLRDHMTCWELWRPGS*LLYLYR
Trigger: CCTGTAAAGATACAGGAGGCAGCTCCCTGGCCTCCA...CAACTCCCAGCATGTCATGTGGTCTCTTAGAAATCCATGTGACTGTTTCCACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR-3UTR CCA 90 bp CTTCCAGGGAAGAGTGCCGCTTCTGGACAACTAAGATGTCCCTTTGCCTGTCATACTAGCTGTCTCATCTaGTCCCATGTTCCTGGAATG +
Preference number: 2 (lower is better)
Translates to: LPGKSAASGQLRCPFACHTSCLI*SHVPGM
Trigger: CATTCCAGGAACATGGGACCAGATGAGACAGCTAGT...ATGACAGGCAAAGGGACATCTTAGTTGTCCAGAAGCGGCACTCTTCCCTGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR-3UTR CCA 90 bp ACTTCTGGCTGTAGTGAGCCTCTTTCTACGTGTGGGTGCTTCTGCTGGGCTCCTCAGAATTTAAGGAAGTaGCTTGGGCAGAAGCACTTT +
Preference number: 2 (lower is better)
Translates to: TSGCSEPLSTCGCFCWAPQNLRK*LGQKHF
Trigger: AAAGTGCTTCTGCCCAAGCCACTTCCTTAAATTCTG...AGGAGCCCAGCAGAAGCACCCACACGTAGAAAGAGGCTCACTACAGCCAGAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR-3UTR CCA 90 bp ACTTCTGGCTGTAGTGAGCCTCTTTCTACGTGTGGGTGCTTCTGCTGGGCTCCTAAGTCTAGTGGCACCTaGACACAAAACTTAAGCAGT +
Preference number: 2 (lower is better)
Translates to: TSGCSEPLSTCGCFCWAPKSSGT*TQNLSS
Trigger: ACTGCTTAAGTTTTGTGTCCAGGTGCCACTAGACTT...AGGAGCCCAGCAGAAGCACCCACACGTAGAAAGAGGCTCACTACAGCCAGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR-3UTR CCA 90 bp TGGTGGAAACAGTCACATGGATTTCTAAGAGACCACATGACATGCTGGGAGTTGCTTGTAGAGGAGCAATaGAGGGGCACACAGAGGGGT +
Preference number: 2 (lower is better)
Translates to: WWKQSHGFLRDHMTCWELLVEEQ*RGTQRG
Trigger: ACCCCTCTGTGTGCCCCTCCATTGCTCCTCTACAAG...CAACTCCCAGCATGTCATGTGGTCTCTTAGAAATCCATGTGACTGTTTCCACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR CAA 90 bp AGGCAGGAGGGAGAGTGCAGCTCGCTGTGGCCAGAAATCCAGCCTTaGCTCCTTAATCAGACACTAATGGGCATATCTATCTTCATTGTT +
Preference number: 2 (lower is better)
Translates to: RQEGECSSLWPEIQP*LLNQTLMGISIFIV
Trigger: AACAATGAAGATAGATATGCCCATTAGTGTCTGATTAAGGAGCAAAGGCTGGATTTCTGGCCACAGCGAGCTGCACTCTCCCTCCTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR CAA 90 bp CAAGTTAAAAGGTTGGAAGCTCCCTTCTGCCAGCATATAGAGCCCTaGTCAGAACCATCTGCATTGTTGGGACAACGCTTCGAACGGCAA +
Preference number: 2 (lower is better)
Translates to: QVKRLEAPFCQHIEP*SEPSALLGQRFERQ
Trigger: TTGCCGTTCGAAGCGTTGTCCCAACAATGCAGATGGTTCTGACAAGGGCTCTATATGCTGGCAGAAGGGAGCTTCCAACCTTTTAACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR-3UTR CCA 90 bp CCAGTGATTCCAGGAATTCCAGACAGGTGGTCCATGTCCCTTCTCCCTCATTGTGTAATCCTATTAACATaGCGGCTTCCAGGGAAGAGT +
Preference number: 2 (lower is better)
Translates to: PVIPGIPDRWSMSLLPHCVILLT*RLPGKS
Trigger: ACTCTTCCCTGGAAGCCGCCATGTTAATAGGATTAC...ACAATGAGGGAGAAGGGACATGGACCACCTGTCTGGAATTCCTGGAATCACTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR CAA 90 bp AAACAGTCACATGGATTTCTAAGAGACCACATGACATGCTGGGAGTaGCAGATCACTGTCCTCAGCTCGCATTATTTGAACGCAGGGCAG +
Preference number: 2 (lower is better)
Translates to: KQSHGFLRDHMTCWE*QITVLSSHYLNAGQ
Trigger: CTGCCCTGCGTTCAAATAATGCGAGCTGAGGACAGTGATCTGCAACTCCCAGCATGTCATGTGGTCTCTTAGAAATCCATGTGACTGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR-3UTR GCA 90 bp CCAGTGATTCCAGGAATTCCAGACAGGTGGTCCATGTCCCTTCTCCCTCATTGTACTAAGATGTCCCTTTaGCTGTCATCAAGAACACTC +
Preference number: 2 (lower is better)
Translates to: PVIPGIPDRWSMSLLPHCTKMSL*LSSRTL
Trigger: GAGTGTTCTTGATGACAGGCAAAGGGACATCTTAGT...ACAATGAGGGAGAAGGGACATGGACCACCTGTCTGGAATTCCTGGAATCACTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR-3UTR GCA 90 bp CTAAGAGACCACATGACATGCTGGGAGTTGCAGATCACTGTCCTCAGCTCGCATGCACCCAGCCTAAGTTaGTCTTTTGAATCACCTAAT +
Preference number: 2 (lower is better)
Translates to: LRDHMTCWELQITVLSSHAPSLS*SFESPN
Trigger: ATTAGGTGATTCAAAAGAGCAACTTAGGCTGGGTGC...ATGCGAGCTGAGGACAGTGATCTGCAACTCCCAGCATGTCATGTGGTCTCTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR-3UTR GCA 90 bp CTAAGAGACCACATGACATGCTGGGAGTTGCAGATCACTGTCCTCAGCTCGCATAAGAAACCCAGTAAATaGTCAAGGTCTGAGCTCAGA +
Preference number: 2 (lower is better)
Translates to: LRDHMTCWELQITVLSSHKKPSK*SRSELR
Trigger: TCTGAGCTCAGACCTTGAGCATTTACTGGGTTTCTT...ATGCGAGCTGAGGACAGTGATCTGCAACTCCCAGCATGTCATGTGGTCTCTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR-3UTR CCA 90 bp AAGCACTTTCACAGCTTCAGGAGAATGCACGGTATCCACACTGAATGTAAAGGAAGGGAAGTGCTTAGTTaGGGCAGAGAGCTCAGTGAG +
Preference number: 2 (lower is better)
Translates to: KHFHSFRRMHGIHTECKGREVLS*GRELSE
Trigger: CTCACTGAGCTCTCTGCCCCAACTAAGCACTTCCCT...TCCTTTACATTCAGTGTGGATACCGTGCATTCTCCTGAAGCTGTGAAAGTGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR CAA 90 bp CTAATAATGAAGGCAGATGATGCTTCTGAAGAAGGAAAGTGCCATTaGTCTTGCAGGGATCAGGCAGCAGTGCTGACAACAGACAGACTC +
Preference number: 2 (lower is better)
Translates to: LIMKADDASEEGKCH*SCRDQAAVLTTDRL
Trigger: GAGTCTGTCTGTTGTCAGCACTGCTGCCTGATCCCTGCAAGACAAATGGCACTTTCCTTCTTCAGAAGCATCATCTGCCTTCATTATTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR CAA 90 bp ATAATTCTGGTTATCCAGATTTTTCAGAGAGGTCCCTTTTCCTGCTaGGAAGCTGTGGGCTCTGTCCTCTGGGTTCTCAGTACTCAGTTC +
Preference number: 2 (lower is better)
Translates to: IILVIQIFQRGPFSC*EAVGSVLWVLSTQF
Trigger: GAACTGAGTACTGAGAACCCAGAGGACAGAGCCCACAGCTTCCAAGCAGGAAAAGGGACCTCTCTGAAAAATCTGGATAACCAGAATTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR-3UTR CCA 90 bp CTCGCATTATTTGAACGCAGGGCAGTGACCATGATCACTGCTGCTGCTCAGAAGAACGCAGTAATGGTGTaGTTCTTTAAGAAACTGGGA +
Preference number: 2 (lower is better)
Translates to: LALFERRAVTMITAAAQKNAVMV*FFKKLG
Trigger: TCCCAGTTTCTTAAAGAACCACACCATTACTGCGTT...CTTCTGAGCAGCAGCAGTGATCATGGTCACTGCCCTGCGTTCAAATAATGCGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR-3UTR GCA 90 bp CTAAGAGACCACATGACATGCTGGGAGTTGCAGATCACTGTCCTCAGCTCGCATGAAGAAAGAAAAGTGTaGCCTTCTCTCTGGTTTTTA +
Preference number: 2 (lower is better)
Translates to: LRDHMTCWELQITVLSSHEERKV*PSLWFL
Trigger: TAAAAACCAGAGAGAAGGGCACACTTTTCTTTCTTC...ATGCGAGCTGAGGACAGTGATCTGCAACTCCCAGCATGTCATGTGGTCTCTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR-3UTR TCA 90 bp TCCTTGCTTGCCAGGACCCCAGATGCTGATATTTCAGAATTTAAGGAAGTGGCTTCTTCTGACTCAGCTTaGCCACAACATGGGATATTT +
Preference number: 2 (lower is better)
Translates to: SLLARTPDADISEFKEVASSDSA*PQHGIF
Trigger: AAATATCCCATGTTGTGGTCAAGCTGAGTCAGAAGA...AGCCACTTCCTTAAATTCTGAAATATCAGCATCTGGGGTCCTGGCAAGCAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR-3UTR TCA 90 bp AAGCACTTTCACAGCTTCAGGAGAATGCACGGTATCCACACTGAATGTAAAGGAAACAAGACACACGAGTaGTTATTTACCACCAGCAAG +
Preference number: 2 (lower is better)
Translates to: KHFHSFRRMHGIHTECKGNKTHE*LFTTSK
Trigger: CTTGCTGGTGGTAAATAATCACTCGTGTGTCTTGTT...TCCTTTACATTCAGTGTGGATACCGTGCATTCTCCTGAAGCTGTGAAAGTGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR-3UTR TCA 90 bp AAATATACACGAGAGCTTCCTAACCAGCTTTTTAAGTTTCTCCACTACAGAGGGTTGCAGTGTATAAAGTaGGGAGAAAGCCTCTCTGGG +
Preference number: 2 (lower is better)
Translates to: KYTRELPNQLFKFLHYRGLQCIK*GESLSG
Trigger: CCCAGAGAGGCTTTCTCCTCACTTTATACACTGCAA...CCCTCTGTAGTGGAGAAACTTAAAAAGCTGGTTAGGAAGCTCTCGTGTATATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR-3UTR GCA 90 bp TGGTGGAAACAGTCACATGGATTTCTAAGAGACCACATGACATGCTGGGAGTTGCTGGGAATGAGAAGGTaGTGTGATAATTCTGGTTAT +
Preference number: 2 (lower is better)
Translates to: WWKQSHGFLRDHMTCWELLGMRR*CDNSGY
Trigger: ATAACCAGAATTATCACAGCACCTTCTCATTCCCAG...CAACTCCCAGCATGTCATGTGGTCTCTTAGAAATCCATGTGACTGTTTCCACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR-3UTR CCA 90 bp TGGTGGAAACAGTCACATGGATTTCTAAGAGACCACATGACATGCTGGGAGTTGTCAATGACTCACAAATaGGGAAAAGTGGAAAGCATG +
Preference number: 2 (lower is better)
Translates to: WWKQSHGFLRDHMTCWELSMTHK*GKVESM
Trigger: CATGCTTTCCACTTTTCCCCATTTGTGAGTCATTGA...CAACTCCCAGCATGTCATGTGGTCTCTTAGAAATCCATGTGACTGTTTCCACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR GCA 72 bp ATCTGCCAGGACGAAGCAAAGCGGGCCGATGGCAGCTaGAGGGAGCACAACCCACCTCGGGGCTGGGGCAGG +
Preference number: 3 (lower is better)
Translates to: ICQDEAKRADGS*REHNPPRGWGR
Trigger: CCTGCCCCAGCCCCGAGGTGGGTTGTGCTCCCTGCAGCTGCCATCGGCCCGCTTTGCTTCGTCCTGGCAGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR GCA 72 bp CGGGCAAGCCCTTTGCTTCCCACTGAACGCACAACGTaGTGGACCACGGACCCCTGGGCCAGGAGCCCAGAC +
Preference number: 3 (lower is better)
Translates to: RASPLLPTERTT*WTTDPWARSPD
Trigger: GTCTGGGCTCCTGGCCCAGGGGTCCGTGGTCCAGCACGTTGTGCGTTCAGTGGGAAGCAAAGGGCTTGCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR GCA 72 bp ACCCTGGCACTTGCTCGGGGACAATCACTGGGCATCTaGCAGGACGAAGCAAAGCGGGCCGATGGCAGCTGC +
Preference number: 3 (lower is better)
Translates to: TLALARGQSLGI*QDEAKRADGSC
Trigger: GCAGCTGCCATCGGCCCGCTTTGCTTCGTCCTGGCAGATGCCCAGTGATTGTCCCCGAGCAAGTGCCAGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR CCA 72 bp GCCTCTTTCTACGTGTGGGTGCTTCTGCTGGGCTCCTaGGTGTTGGCCAGGGAGGGTCCCCTTCTGCCTGCA +
Preference number: 3 (lower is better)
Translates to: ASFYVWVLLLGS*VLAREGPLLPA
Trigger: TGCAGGCAGAAGGGGACCCTCCCTGGCCAACACCCAGGAGCCCAGCAGAAGCACCCACACGTAGAAAGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR CCA 72 bp GCAAGCCCTTTGCTTCCCACTGAACGCACAACGTGCTaGACCACGGACCCCTGGGCCAGGAGCCCAGACACT +
Preference number: 3 (lower is better)
Translates to: ASPLLPTERTTC*TTDPWARSPDT
Trigger: AGTGTCTGGGCTCCTGGCCCAGGGGTCCGTGGTCCAGCACGTTGTGCGTTCAGTGGGAAGCAAAGGGCTTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR CCA 72 bp CCTGGGCCTCCCTGTCATAGCAGCTCAGCCCAACCCTaGCACTTGCTCGGGGACAATCACTGGGCATCTGCC +
Preference number: 3 (lower is better)
Translates to: PGPPCHSSSAQP*HLLGDNHWASA
Trigger: GGCAGATGCCCAGTGATTGTCCCCGAGCAAGTGCCAGGGTTGGGCTGAGCTGCTATGACAGGGAGGCCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR CCA 72 bp AGGACCCAAGAGCAGATGACAGCCTTGCCAAATGTCTaGATGGAGCCATCCGGGCAGGCGCGAGGCTGCCGC +
Preference number: 3 (lower is better)
Translates to: RTQEQMTALPNV*MEPSGQARGCR
Trigger: GCGGCAGCCTCGCGCCTGCCCGGATGGCTCCATCCAGACATTTGGCAAGGCTGTCATCTGCTCTTGGGTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR GCA 72 bp AATGTCTGGATGGAGCCATCCGGGCAGGCGCGAGGCTaGCGCCACGGTCAAAAGACCAGCATCCAGAATCCC +
Preference number: 3 (lower is better)
Translates to: NVWMEPSGQARG*RHGQKTSIQNP
Trigger: GGGATTCTGGATGCTGGTCTTTTGACCGTGGCGGCAGCCTCGCGCCTGCCCGGATGGCTCCATCCAGACATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR CCA 72 bp TCAGCCCAACCCTGGCACTTGCTCGGGGACAATCACTaGGCATCTGCCAGGACGAAGCAAAGCGGGCCGATG +
Preference number: 3 (lower is better)
Translates to: SAQPWHLLGDNH*ASARTKQSGPM
Trigger: CATCGGCCCGCTTTGCTTCGTCCTGGCAGATGCCCAGTGATTGTCCCCGAGCAAGTGCCAGGGTTGGGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR TCA 72 bp GAGAGCAGTGGGCGGGAGGTTGAGCATGTTCCACTCTaGGGACAGTCAGGGACCTGTGGAAGCCAGAGCTGG +
Preference number: 3 (lower is better)
Translates to: ESSGREVEHVPL*GQSGTCGSQSW
Trigger: CCAGCTCTGGCTTCCACAGGTCCCTGACTGTCCTCAGAGTGGAACATGCTCAACCTCCCGCCCACTGCTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR TCA 72 bp GCCAGAGTGGTCTGGCCAGCCTCCAAGCCTTCCAGCTaGACCGGGGCTGGAAAAGCATCTGCTGCCTTTCCA +
Preference number: 3 (lower is better)
Translates to: ARVVWPASKPSS*TGAGKASAAFP
Trigger: TGGAAAGGCAGCAGATGCTTTTCCAGCCCCGGTTCAGCTGGAAGGCTTGGAGGCTGGCCAGACCACTCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR GCA 72 bp CTCCCTGTCATAGCAGCTCAGCCCAACCCTGGCACTTaGTCGGGGACAATCACTGGGCATCTGCCAGGACGA +
Preference number: 3 (lower is better)
Translates to: LPVIAAQPNPGT*SGTITGHLPGR
Trigger: TCGTCCTGGCAGATGCCCAGTGATTGTCCCCGAGCAAGTGCCAGGGTTGGGCTGAGCTGCTATGACAGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR-3UTR CAA 90 bp AGCCCAACCCTGGCACTTGCTCGGGGACAATCACTGGGCATCTGCCAGGACGAAGGGCAGACCTGGGGTTaGATGGAGAGAGACTTGCTG +
Preference number: 3 (lower is better)
Translates to: SPTLALARGQSLGICQDEGQTWG*MERDLL
Trigger: CAGCAAGTCTCTCTCCATCAAACCCCAGGTCTGCCC...TTCGTCCTGGCAGATGCCCAGTGATTGTCCCCGAGCAAGTGCCAGGGTTGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR-3UTR CAA 90 bp GAGGTTCTGGAACTGATAAATCCCTGTGCACTGCCGCCTGCCCCTTTCCTGGACTTGGCCAGGCTGGTCTaGAACTCCTGTCCCTGCCCG +
Preference number: 3 (lower is better)
Translates to: EVLELINPCALPPAPFLDLARLV*NSCPCP
Trigger: CGGGCAGGGACAGGAGTTCAAGACCAGCCTGGCCAA...GTCCAGGAAAGGGGCAGGCGGCAGTGCACAGGGATTTATCAGTTCCAGAACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR TCA 72 bp AGATGGTCCATCCCAGGGGGATCACCCTGGTGGGCATaGTGCAGGGTGCCTCTAGAGCTGACAGAACTGGGT +
Preference number: 3 (lower is better)
Translates to: RWSIPGGSPWWA*CRVPLELTELG
Trigger: ACCCAGTTCTGTCAGCTCTAGAGGCACCCTGCATCATGCCCACCAGGGTGATCCCCCTGGGATGGACCATCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR GCA 72 bp CTGCCATCTCCATGGGCCATTTGGAGGCCAGGGAGCTaGCTCCTGTATCTTTACAGGGGTCAGGCCCTCCTA +
Preference number: 3 (lower is better)
Translates to: LPSPWAIWRPGS*LLYLYRGQALL
Trigger: TAGGAGGGCCTGACCCCTGTAAAGATACAGGAGGCAGCTCCCTGGCCTCCAAATGGCCCATGGAGATGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR GCA 72 bp CTTCACCGCAGCAAACACAGAACCCTGTCTCCCGACTaGCATCTCCATGGGCCATTTGGAGGCCAGGGAGCT +
Preference number: 3 (lower is better)
Translates to: LHRSKHRTLSPD*HLHGPFGGQGA
Trigger: AGCTCCCTGGCCTCCAAATGGCCCATGGAGATGGCAGTCGGGAGACAGGGTTCTGTGTTTGCTGCGGTGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR GCA 72 bp ACTTCTGGCTGTAGTGAGCCTCTTTCTACGTGTGGGTaGTTCTGCTGGGCTCCTGGGTGTTGGCCAGGGAGG +
Preference number: 3 (lower is better)
Translates to: TSGCSEPLSTCG*FCWAPGCWPGR
Trigger: CCTCCCTGGCCAACACCCAGGAGCCCAGCAGAAGCACCCACACGTAGAAAGAGGCTCACTACAGCCAGAAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR-3UTR CAA 90 bp GAGGTTCTGGAACTGATAAATCCCTGTGCACTGCCGCCTGCCCCTTTCCTGGACATCTCCATGGGCCATTaGGAGGCCAGGGAGCTGCCT +
Preference number: 3 (lower is better)
Translates to: EVLELINPCALPPAPFLDISMGH*EARELP
Trigger: AGGCAGCTCCCTGGCCTCCAAATGGCCCATGGAGAT...GTCCAGGAAAGGGGCAGGCGGCAGTGCACAGGGATTTATCAGTTCCAGAACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR TCA 72 bp AGGGAAGATTTGAGCATGTGGGGCAGAGTGACTCCATaGGGACGTCAAGCAACCCCGCCATGGCTCTGGGCT +
Preference number: 3 (lower is better)
Translates to: REDLSMWGRVTP*GRQATPPWLWA
Trigger: AGCCCAGAGCCATGGCGGGGTTGCTTGACGTCCTCATGGAGTCACTCTGCCCCACATGCTCAAATCTTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR GCA 72 bp CCAAGATGGGGCAACCCCGAGGAAGTCACTGTAATCTaGAATGCAGAGTGGTCGAGGCCTCCAATGCCCTGG +
Preference number: 3 (lower is better)
Translates to: PRWGNPEEVTVI*NAEWSRPPMPW
Trigger: CCAGGGCATTGGAGGCCTCGACCACTCTGCATTGCAGATTACAGTGACTTCCTCGGGGTTGCCCCATCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR GCA 72 bp AGGGGAAGGACAGCATTGGCTTGGAGTAGGAAGAGCTaGGCCATCATCCTGCCTGGGTCCCTGGAAGCACAA +
Preference number: 3 (lower is better)
Translates to: RGRTALAWSRKS*AIILPGSLEAQ
Trigger: TTGTGCTTCCAGGGACCCAGGCAGGATGATGGCGCAGCTCTTCCTACTCCAAGCCAATGCTGTCCTTCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR CCA 72 bp CAAACACAGAACCCTGTCTCCCGACTGCCATCTCCATaGGCCATTTGGAGGCCAGGGAGCTGCCTCCTGTAT +
Preference number: 3 (lower is better)
Translates to: QTQNPVSRLPSP*AIWRPGSCLLY
Trigger: ATACAGGAGGCAGCTCCCTGGCCTCCAAATGGCCCATGGAGATGGCAGTCGGGAGACAGGGTTCTGTGTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR TCA 72 bp TCTCGCACCCACCTTCAAGATGCCTGGACATTCTCCTaGGGGCAGCTTCTCAGCAACCTCCTCAGGGAAGTG +
Preference number: 3 (lower is better)
Translates to: SRTHLQDAWTFS*GQLLSNLLREV
Trigger: CACTTCCCTGAGGAGGTTGCTGAGAAGCTGCCCTCAGGAGAATGTCCAGGCATCTTGAAGGTGGGTGCGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR GCA 72 bp CTGAGCAGCCTGCCAATCTCGCACCCACCTTCAAGATaGCTGGACATTCTCCTGAGGGCAGCTTCTCAGCAA +
Preference number: 3 (lower is better)
Translates to: LSSLPISHPPSR*LDILLRAASQQ
Trigger: TTGCTGAGAAGCTGCCCTCAGGAGAATGTCCAGGCATCTTGAAGGTGGGTGCGAGATTGGCAGGCTGCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR GCA 72 bp ATGGGGCAACCCCGAGGAAGTCACTGTAATCTGCAATaGAGAGTGGTCGAGGCCTCCAATGCCCTGGACCAT +
Preference number: 3 (lower is better)
Translates to: MGQPRGSHCNLQ*RVVEASNALDH
Trigger: ATGGTCCAGGGCATTGGAGGCCTCGACCACTCTGCATTGCAGATTACAGTGACTTCCTCGGGGTTGCCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR CCA 72 bp TGTTGCTCAGCCACGTGGATGGGGCTCGGTGTGGAATaGGCTCTGATTCCCCCAATAATCGAGGCCTGCAAA +
Preference number: 3 (lower is better)
Translates to: CCSATWMGLGVE*ALIPPIIEACK
Trigger: TTTGCAGGCCTCGATTATTGGGGGAATCAGAGCCCATTCCACACCGAGCCCCATCCACGTGGCTGAGCAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR TCA 72 bp TGTAGGATGTTCGGTGGCATCCCTGGCCTCCACCCATaGGATACCAATAGCAGTCCCCACCAAGCTGTGAGA +
Preference number: 3 (lower is better)
Translates to: CRMFGGIPGLHP*DTNSSPHQAVR
Trigger: TCTCACAGCTTGGTGGGGACTGCTATTGGTATCTCATGGGTGGAGGCCAGGGATGCCACCGAACATCCTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR GCA 72 bp CCATTCCTAAGCTCTTCCCCAAGCATACTCTTCATATaGATTGGTGAGGGGCCAGGTCCCTGGAGGTCCCAG +
Preference number: 3 (lower is better)
Translates to: PFLSSSPSILFI*IGEGPGPWRSQ
Trigger: CTGGGACCTCCAGGGACCTGGCCCCTCACCAATGCATATGAAGAGTATGCTTGGGGAAGAGCTTAGGAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR CCA 72 bp AACCCCGAGGAAGTCACTGTAATCTGCAATGCAGAGTaGTCGAGGCCTCCAATGCCCTGGACCATCTACTGC +
Preference number: 3 (lower is better)
Translates to: NPEEVTVICNAE*SRPPMPWTIYC
Trigger: GCAGTAGATGGTCCAGGGCATTGGAGGCCTCGACCACTCTGCATTGCAGATTACAGTGACTTCCTCGGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR-3UTR CAA 90 bp CTAAGAGACCACATGACATGCTGGGAGTTGCAGATCACTGTCCTCAGCTCGCATGGTCTCCCAATGCACTaGGGTCTTGGAAGGGACCAG +
Preference number: 3 (lower is better)
Translates to: LRDHMTCWELQITVLSSHGLPMH*GLGRDQ
Trigger: CTGGTCCCTTCCAAGACCCAAGTGCATTGGGAGACC...ATGCGAGCTGAGGACAGTGATCTGCAACTCCCAGCATGTCATGTGGTCTCTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR-3UTR CAA 90 bp CCCGAGATGGTCCATCCCAGGGGGATCACCCTGGTGGGCATGATGCAGGGTGCCCTACAGAGGGTGTTATaGACACAATTCTTCTGTTTT +
Preference number: 3 (lower is better)
Translates to: PEMVHPRGITLVGMMQGALQRVL*TQFFCF
Trigger: AAAACAGAAGAATTGTGTCAATAACACCCTCTGTAG...GGCACCCTGCATCATGCCCACCAGGGTGATCCCCCTGGGATGGACCATCTCGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR TCA 72 bp GGACTGAATGTGAAACCAGAATTGGGTCAGGAACACTaGAGTTCTGAGGGCTGCTCTTGCCCCAGCACCCCA +
Preference number: 3 (lower is better)
Translates to: GLNVKPELGQEH*SSEGCSCPSTP
Trigger: TGGGGTGCTGGGGCAAGAGCAGCCCTCAGAACTTCAGTGTTCCTGACCCAATTCTGGTTTCACATTCAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR TCA 72 bp GCAGTGACAGATGTGATCGGTAAGAACTGGCAGCCATaGGCAGGCACTGTCTGGAGCCAGGCTAGTAATCCT +
Preference number: 3 (lower is better)
Translates to: AVTDVIGKNWQP*AGTVWSQASNP
Trigger: AGGATTACTAGCCTGGCTCCAGACAGTGCCTGCTCATGGCTGCCAGTTCTTACCGATCACATCTGTCACTGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR TCA 72 bp AGTGCCATTTGTCTTGCAGGGATCAGGCAGCAGTGCTaGCAACAGACAGACTCCACTGAGCCTCTTCGGTCT +
Preference number: 3 (lower is better)
Translates to: SAICLAGIRQQC*QQTDSTEPLRS
Trigger: AGACCGAAGAGGCTCAGTGGAGTCTGTCTGTTGTCAGCACTGCTGCCTGATCCCTGCAAGACAAATGGCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR TCA 72 bp GTGCACTGCCGCCTGCCCCTTTCCTGGACTTACACTTaGATGTGGCAATCTGGCTATAAGCTCTTCAGGACC +
Preference number: 3 (lower is better)
Translates to: VHCRLPLSWTYT*MWQSGYKLFRT
Trigger: GGTCCTGAAGAGCTTATAGCCAGATTGCCACATTCAAGTGTAAGTCCAGGAAAGGGGCAGGCGGCAGTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR TCA 72 bp ATAGTTAGGTGTCCTGGGCTCAAGACCCCTGTCTCCTaGAAAGCTCCACCTGGCAACACTCTCAAGCCTCTC +
Preference number: 3 (lower is better)
Translates to: IVRCPGLKTPVS*KAPPGNTLKPL
Trigger: GAGAGGCTTGAGAGTGTTGCCAGGTGGAGCTTTTCAGGAGACAGGGGTCTTGAGCCCAGGACACCTAACTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR CCA 72 bp AGCGGCGTCTGGCCTCTTCTCAAAGACCTTCAGTGGTaGCCACTCACAACCTCACAAAGCAGTAAGTTGCTC +
Preference number: 3 (lower is better)
Translates to: SGVWPLLKDLQW*PLTTSQSSKLL
Trigger: GAGCAACTTACTGCTTTGTGAGGTTGTGAGTGGCCACCACTGAAGGTCTTTGAGAAGAGGCCAGACGCCGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR-3UTR CAA 90 bp GAGGTTCTGGAACTGATAAATCCCTGTGCACTGCCGCCTGCCCCTTTCCTGGACCTCTCTGGTTTTTACTaGGAAGCTTCCTTGCTTGCC +
Preference number: 3 (lower is better)
Translates to: EVLELINPCALPPAPFLDLSGFY*EASLLA
Trigger: GGCAAGCAAGGAAGCTTCCAAGTAAAAACCAGAGAG...GTCCAGGAAAGGGGCAGGCGGCAGTGCACAGGGATTTATCAGTTCCAGAACCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR-3UTR CAA 90 bp GGATTTATTTCCAAGGCAGAATGGGGCTCAAACCTCCTCTTGGGGAGGCAGGAAAGGGGAAGGACAGCATaGGCTTGGAGTAGGAAGAGC +
Preference number: 3 (lower is better)
Translates to: GFISKAEWGSNLLLGRQERGRTA*AWSRKS
Trigger: GCTCTTCCTACTCCAAGCCAATGCTGTCCTTCCCCT...TTCCTGCCTCCCCAAGAGGAGGTTTGAGCCCCATTCTGCCTTGGAAATAAATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR CCA 72 bp TACAGCGGCGTCTGGCCTCTTCTCAAAGACCTTCAGTaGTGGCCACTCACAACCTCACAAAGCAGTAAGTTG +
Preference number: 3 (lower is better)
Translates to: YSGVWPLLKDLQ*WPLTTSQSSKL
Trigger: CAACTTACTGCTTTGTGAGGTTGTGAGTGGCCACCACTGAAGGTCTTTGAGAAGAGGCCAGACGCCGCTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR-3UTR CAA 90 bp GAGGTTCTGGAACTGATAAATCCCTGTGCACTGCCGCCTGCCCCTTTCCTGGACATTTGCCTCTTGACCTaGATTTCATGGGAAAGGGGA +
Preference number: 3 (lower is better)
Translates to: EVLELINPCALPPAPFLDICLLT*ISWERG
Trigger: TCCCCTTTCCCATGAAATCAAGGTCAAGAGGCAAAT...GTCCAGGAAAGGGGCAGGCGGCAGTGCACAGGGATTTATCAGTTCCAGAACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR-3UTR CAA 90 bp CTCGCATTATTTGAACGCAGGGCAGTGACCATGATCACTGCTGCTGCTCAGAAGGTCCCTTCTCCCTCATaGTCAAGGGTCAGGTTCTTT +
Preference number: 3 (lower is better)
Translates to: LALFERRAVTMITAAAQKVPSPS*SRVRFF
Trigger: AAAGAACCTGACCCTTGACAATGAGGGAGAAGGGAC...CTTCTGAGCAGCAGCAGTGATCATGGTCACTGCCCTGCGTTCAAATAATGCGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR TCA 72 bp CTGAATTTAACCGACATTTATGTTAGGGCTGGAGGCTaGGGGGCCTCCATAGGGAAAACTGCAGCCAGAAGC +
Preference number: 3 (lower is better)
Translates to: LNLTDIYVRAGG*GASIGKTAARS
Trigger: GCTTCTGGCTGCAGTTTTCCCTATGGAGGCCCCTCAGCCTCCAGCCCTAACATAAATGTCGGTTAAATTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR TCA 72 bp GCAGGAAATCAGCTTGAAAAAGGACCCAAGAGCAGATaGCAGCCTTGCCAAATGTCTGGATGGAGCCATCCG +
Preference number: 3 (lower is better)
Translates to: AGNQLEKGPKSR*QPCQMSGWSHP
Trigger: CGGATGGCTCCATCCAGACATTTGGCAAGGCTGTCATCTGCTCTTGGGTCCTTTTTCAAGCTGATTTCCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR GCA 72 bp GGTTCTGGAACTGATAAATCCCTGTGCACTGCCGCCTaGCCCTTTCCTGGACTTACACTTGAATGTGGCAAT +
Preference number: 3 (lower is better)
Translates to: GSGTDKSLCTAA*PFPGLTLECGN
Trigger: ATTGCCACATTCAAGTGTAAGTCCAGGAAAGGGGCAGGCGGCAGTGCACAGGGATTTATCAGTTCCAGAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR CCA 72 bp CCCAATGCACTTGGGTCTTGGAAGGGACCAGGTGTCTaGTGGCAAAGGTGCCATTTCAAAGTCAAACTAGGA +
Preference number: 3 (lower is better)
Translates to: PNALGSWKGPGV*WQRCHFKVKLG
Trigger: TCCTAGTTTGACTTTGAAATGGCACCTTTGCCACCAGACACCTGGTCCCTTCCAAGACCCAAGTGCATTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR CCA 72 bp TGGAAAGCATGCATAGTTTCAGAATCAGAGATAGGATaGCCAGCACAGGGTCCCCTGACCTCGGCACTATTG +
Preference number: 3 (lower is better)
Translates to: WKACIVSESEIG*PAQGPLTSALL
Trigger: CAATAGTGCCGAGGTCAGGGGACCCTGTGCTGGCCATCCTATCTCTGATTCTGAAACTATGCATGCTTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR TCA 72 bp TCCCTCATTGTCAAGGGTCAGGTTCTTTTGCACTCGTaGCCTCCCCTTAAGCTGATGCACTGGCAGATGATA +
Preference number: 3 (lower is better)
Translates to: SLIVKGQVLLHS*PPLKLMHWQMI
Trigger: TATCATCTGCCAGTGCATCAGCTTAAGGGGAGGTCACGAGTGCAAAAGAACCTGACCCTTGACAATGAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR GCA 72 bp GGCTTGGGCAGAAGCACTTTCACAGCTTCAGGAGAATaGACGGTATCCACACTGAATGTAAAGGACGGGTAT +
Preference number: 3 (lower is better)
Translates to: GLGRSTFTASGE*TVSTLNVKDGY
Trigger: ATACCCGTCCTTTACATTCAGTGTGGATACCGTGCATTCTCCTGAAGCTGTGAAAGTGCTTCTGCCCAAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR GCA 72 bp AGTAATCCTATTAACATGGCGGCTTCCAGGGAAGAGTaGCGCTTCTGGACAACTAAGATGTCCCTTTGCCTG +
Preference number: 3 (lower is better)
Translates to: SNPINMAASREE*RFWTTKMSLCL
Trigger: CAGGCAAAGGGACATCTTAGTTGTCCAGAAGCGGCACTCTTCCCTGGAAGCCGCCATGTTAATAGGATTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR GCA 72 bp GTGGAATGGGCTCTGATTCCCCCAATAATCGAGGCCTaGAAATTCCCTGCAAATATGCTGTGCACATCTGTC +
Preference number: 3 (lower is better)
Translates to: VEWALIPPIIEA*KFPANMLCTSV
Trigger: GACAGATGTGCACAGCATATTTGCAGGGAATTTGCAGGCCTCGATTATTGGGGGAATCAGAGCCCATTCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR CCA 72 bp GCCATGGCTCTGGGCTTCTCGCCTTGGGTTTTCTCATaGAGACATCCATCTGTTAAAGATCTTGCTTATGGG +
Preference number: 3 (lower is better)
Translates to: AMALGFSPWVFS*RHPSVKDLAYG
Trigger: CCCATAAGCAAGATCTTTAACAGATGGATGTCTCCATGAGAAAACCCAAGGCGAGAAGCCCAGAGCCATGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR-3UTR CAA 90 bp CTAAGAGACCACATGACATGCTGGGAGTTGCAGATCACTGTCCTCAGCTCGCATCCAGAAATCCAGCCTTaGCTCCTTAATCAGACACTA +
Preference number: 3 (lower is better)
Translates to: LRDHMTCWELQITVLSSHPEIQP*LLNQTL
Trigger: TAGTGTCTGATTAAGGAGCAAAGGCTGGATTTCTGG...ATGCGAGCTGAGGACAGTGATCTGCAACTCCCAGCATGTCATGTGGTCTCTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR-3UTR CAA 90 bp TGGTGGAAACAGTCACATGGATTTCTAAGAGACCACATGACATGCTGGGAGTTGTGCAGATTCAGGGCCTaGTGTAAATGTGCCCTGGAG +
Preference number: 3 (lower is better)
Translates to: WWKQSHGFLRDHMTCWELCRFRA*CKCALE
Trigger: CTCCAGGGCACATTTACACAAGGCCCTGAATCTGCA...CAACTCCCAGCATGTCATGTGGTCTCTTAGAAATCCATGTGACTGTTTCCACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR TCA 72 bp CAGGAGGCCCATACTTCCATGTCTTCTGACTCAGCTTaGCCACAACATGGGATATTTGAAATCAGGGCTGCT +
Preference number: 3 (lower is better)
Translates to: QEAHTSMSSDSA*PQHGIFEIRAA
Trigger: AGCAGCCCTGATTTCAAATATCCCATGTTGTGGTCAAGCTGAGTCAGAAGACATGGAAGTATGGGCCTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR CCA 72 bp AATGCACTTGGGTCTTGGAAGGGACCAGGTGTCTGGTaGCAAAGGTGCCATTTCAAAGTCAAACTAGGAACA +
Preference number: 3 (lower is better)
Translates to: NALGSWKGPGVW*QRCHFKVKLGT
Trigger: TGTTCCTAGTTTGACTTTGAAATGGCACCTTTGCCACCAGACACCTGGTCCCTTCCAAGACCCAAGTGCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR CCA 72 bp ATCCATCTGTTAAAGATCTTGCTTATGGGGCAGACCTaGGGTTTGATGGAGAGAGACTTGCTGGAGACAGAG +
Preference number: 3 (lower is better)
Translates to: IHLLKILLMGQT*GLMERDLLETE
Trigger: CTCTGTCTCCAGCAAGTCTCTCTCCATCAAACCCCAGGTCTGCCCCATAAGCAAGATCTTTAACAGATGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR-3UTR CAA 90 bp TGGTGGAAACAGTCACATGGATTTCTAAGAGACCACATGACATGCTGGGAGTTGCAGCATATAGAGCCCTaGTCAGAACCATCTGCATTG +
Preference number: 3 (lower is better)
Translates to: WWKQSHGFLRDHMTCWELQHIEP*SEPSAL
Trigger: CAATGCAGATGGTTCTGACAAGGGCTCTATATGCTG...CAACTCCCAGCATGTCATGTGGTCTCTTAGAAATCCATGTGACTGTTTCCACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR TCA 72 bp GTCCCTTTGCCTGTCATCAAGAACACTCATTTCTCCTaGGACCACAGCGGCAAGTCCAGCTTTCTTGTAATT +
Preference number: 3 (lower is better)
Translates to: VPLPVIKNTHFS*DHSGKSSFLVI
Trigger: AATTACAAGAAAGCTGGACTTGCCGCTGTGGTCTCAGGAGAAATGAGTGTTCTTGATGACAGGCAAAGGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR GCA 72 bp ACACAGAGGGGTAAGCACAGAGAACATTCCAGAAAATaGAGGACCCTTTCTCTGAGGCACAGCTATGTAACA +
Preference number: 3 (lower is better)
Translates to: TQRGKHREHSRK*RTLSLRHSYVT
Trigger: TGTTACATAGCTGTGCCTCAGAGAAAGGGTCCTGCATTTTCTGGAATGTTCTCTGTGCTTACCCCTCTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR GCA 72 bp AAACAGTCACATGGATTTCTAAGAGACCACATGACATaGTGGGAGTTGCAGATCACTGTCCTCAGCTCGCAT +
Preference number: 3 (lower is better)
Translates to: KQSHGFLRDHMT*WELQITVLSSH
Trigger: ATGCGAGCTGAGGACAGTGATCTGCAACTCCCAGCATGTCATGTGGTCTCTTAGAAATCCATGTGACTGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR-3UTR CAA 90 bp CTCGCATTATTTGAACGCAGGGCAGTGACCATGATCACTGCTGCTGCTCAGAAGCTAGGTTCGATAAGTTaGCATAAAAACAAGACACAC +
Preference number: 3 (lower is better)
Translates to: LALFERRAVTMITAAAQKLGSIS*HKNKTH
Trigger: GTGTGTCTTGTTTTTATGCAAACTTATCGAACCTAG...CTTCTGAGCAGCAGCAGTGATCATGGTCACTGCCCTGCGTTCAAATAATGCGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR GCA 72 bp AACTTCCCAGATTCAAATCCTAGCTCATCACTTTCATaGTGTGTGACCTCAGGAAGGCAACTTCACTCCTCT +
Preference number: 3 (lower is better)
Translates to: NFPDSNPSSSLS*CVTSGRQLHSS
Trigger: AGAGGAGTGAAGTTGCCTTCCTGAGGTCACACAGCATGAAAGTGATGAGCTAGGATTTGAATCTGGGAAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR GCA 72 bp GCTGCTCTCCCCGAAAAATTAAAGGTCTCGATTAGATaGTCTCTAAAGCCTCTTATCACTGTGAGGTTCTGG +
Preference number: 3 (lower is better)
Translates to: AALPEKLKVSIR*SLKPLITVRFW
Trigger: CCAGAACCTCACAGTGATAAGAGGCTTTAGAGAGCATCTAATCGAGACCTTTAATTTTTCGGGGAGAGCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR GCA 72 bp CATTTTCCTCAAGTTAAAAGGTTGGAAGCTCCCTTCTaGCAGCATATAGAGCCCTTGTCAGAACCATCTGCA +
Preference number: 3 (lower is better)
Translates to: HFPQVKRLEAPF*QHIEPLSEPSA
Trigger: TGCAGATGGTTCTGACAAGGGCTCTATATGCTGGCAGAAGGGAGCTTCCAACCTTTTAACTTGAGGAAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR GCA 72 bp ATAATCGAGGCCTGCAAATTCCCTGCAAATATGCTGTaGACATCTGTCAGGATTTATTTCCAAGGCAGAATG +
Preference number: 3 (lower is better)
Translates to: IIEACKFPANML*TSVRIYFQGRM
Trigger: CATTCTGCCTTGGAAATAAATCCTGACAGATGTGCACAGCATATTTGCAGGGAATTTGCAGGCCTCGATTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR GCA 72 bp TCTGATTCCCCCAATAATCGAGGCCTGCAAATTCCCTaGAAATATGCTGTGCACATCTGTCAGGATTTATTT +
Preference number: 3 (lower is better)
Translates to: SDSPNNRGLQIP*KYAVHICQDLF
Trigger: AAATAAATCCTGACAGATGTGCACAGCATATTTGCAGGGAATTTGCAGGCCTCGATTATTGGGGGAATCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR GCA 90 bp GCCAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGTGGTCGCTCGAGTCCTCGCTaGTGCCGCTGCCGCTGCGGG +
Preference number: 4 (lower is better)
Translates to: AKGRQQVRATCQASPHGGRSSPR*CRCRCG
Trigger: CCCGCAGCGGCAGCGGCAGCAGCGAGGACTCGAGCG...ACCACCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553764.1
ENST00000553782.1
ENST00000555004.3
CDS-3UTR CCA 90 bp CCCGAGATGGTCCATCCCAGGGGGATCACCCTGGTGGGCATGATGCAGGGTGCCCCCTCTCCCCTGTCCTaGGGAGCCTGGGGTCACCTT +
Preference number: 4 (lower is better)
Translates to: PEMVHPRGITLVGMMQGAPSPLS*GAWGHL
Trigger: AAGGTGACCCCAGGCTCCCCAGGACAGGGGAGAGGG...GGCACCCTGCATCATGCCCACCAGGGTGATCCCCCTGGGATGGACCATCTCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR TCA 90 bp GCCAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGTGGTTGGCGGGGATCGGGCTaGGCAGCGAGCGTCCGGAGA +
Preference number: 4 (lower is better)
Translates to: AKGRQQVRATCQASPHGGWRGSG*AASVRR
Trigger: TCTCCGGACGCTCGCTGCTCAGCCCGATCCCCGCCA...ACCACCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000553764.1
ENST00000553782.1
ENST00000555004.3
CDS-3UTR TCA 90 bp CCAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGTGGTGTGGCGGGGATCGGGCTaGGCAGCGAGCGTCCGGAGA +
Preference number: 4 (lower is better)
Translates to: PKADSKSELRAKPHPMVVWRGSG*AASVRR
Trigger: TCTCCGGACGCTCGCTGCTCAGCCCGATCCCCGCCA...CACCACCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000553764.1
ENST00000553782.1
ENST00000555004.3
CDS-3UTR GCA 90 bp CCCGAGATGGTCCATCCCAGGGGGATCACCCTGGTGGGCATGATGCAGGGTGCCGCTGCGCCATCATCCTaGCTGGGTCCCTGGAAGCAC +
Preference number: 4 (lower is better)
Translates to: PEMVHPRGITLVGMMQGAAAPSS*LGPWKH
Trigger: GTGCTTCCAGGGACCCAGGCAGGATGATGGCGCAGC...GGCACCCTGCATCATGCCCACCAGGGTGATCCCCCTGGGATGGACCATCTCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR GCA 90 bp GCCAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGTGGTTGCGGGTCAGCCGCCTaGACAGTTGGCGGGGATCGG +
Preference number: 4 (lower is better)
Translates to: AKGRQQVRATCQASPHGGCGSAA*TVGGDR
Trigger: CCGATCCCCGCCAACTGTGCAGGCGGCTGACCCGCA...ACCACCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000553764.1
ENST00000553782.1
ENST00000555004.3
CDS-3UTR GCA 90 bp AGCCAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGTGGTGCGGGTCAGCCGCCTaGACAGTTGGCGGGGATCGG +
Preference number: 4 (lower is better)
Translates to: SQRPTASQSYVPSLTPWWCGSAA*TVGGDR
Trigger: CCGATCCCCGCCAACTGTGCAGGCGGCTGACCCGCA...CCACCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000553764.1
ENST00000553782.1
ENST00000555004.3
CDS-3UTR GCA 90 bp CAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGTGGTGCTGCGGGTCAGCCGCCTaGACAGTTGGCGGGGATCGG +
Preference number: 4 (lower is better)
Translates to: QRPTASQSYVPSLTPWWCCGSAA*TVGGDR
Trigger: CCGATCCCCGCCAACTGTGCAGGCGGCTGACCCGCA...GCACCACCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000553764.1
ENST00000553782.1
ENST00000555004.3
CDS-3UTR CCA 90 bp CAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGTGGTGCTCTTCCGGCTGGCCCTaGCCATTGGCAGCCGCGTGG +
Preference number: 4 (lower is better)
Translates to: QRPTASQSYVPSLTPWWCSSGWP*PLAAAW
Trigger: CCACGCGGCTGCCAATGGCCAGGGCCAGCCGGAAGA...GCACCACCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553764.1
ENST00000553782.1
ENST00000555004.3
CDS-3UTR CCA 90 bp CCCGAGATGGTCCATCCCAGGGGGATCACCCTGGTGGGCATGATGCAGGGTGCCGAGGGGCCAGGTCCCTaGAGGTCCCAGAGACACAAA +
Preference number: 4 (lower is better)
Translates to: PEMVHPRGITLVGMMQGAEGPGP*RSQRHK
Trigger: TTTGTGTCTCTGGGACCTCCAGGGACCTGGCCCCTC...GGCACCCTGCATCATGCCCACCAGGGTGATCCCCCTGGGATGGACCATCTCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CCA 90 bp CCAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGTGGTGGCTGGCCCTGGCCATTaGCAGCCGCGTGGACATTGG +
Preference number: 4 (lower is better)
Translates to: PKADSKSELRAKPHPMVVAGPGH*QPRGHW
Trigger: CCAATGTCCACGCGGCTGCCAATGGCCAGGGCCAGC...CACCACCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553764.1
ENST00000553782.1
ENST00000555004.3
CDS-3UTR CCA 90 bp CAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGTGGTGCGCTGGCCCTGGCCATTaGCAGCCGCGTGGACATTGG +
Preference number: 4 (lower is better)
Translates to: QRPTASQSYVPSLTPWWCAGPGH*QPRGHW
Trigger: CCAATGTCCACGCGGCTGCCAATGGCCAGGGCCAGC...GCACCACCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553764.1
ENST00000553782.1
ENST00000555004.3
CDS-3UTR CCA 90 bp AGAAGCCAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGTCTTCCGGCTGGCCCTaGCCATTGGCAGCCGCGTGG +
Preference number: 4 (lower is better)
Translates to: RSQRPTASQSYVPSLTPWSSGWP*PLAAAW
Trigger: CCACGCGGCTGCCAATGGCCAGGGCCAGCCGGAAGA...CCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTGGCTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553782.1
ENST00000555004.3
CDS-3UTR CCA 90 bp GCCAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGTGGTGGAGGATCTTCCGGCTaGCCCTGGCCATTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: AKGRQQVRATCQASPHGGGGSSG*PWPLAA
Trigger: GGCTGCCAATGGCCAGGGCCAGCCGGAAGATCCTCC...ACCACCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553764.1
ENST00000553782.1
ENST00000555004.3
CDS-3UTR CCA 90 bp CCCGAGATGGTCCATCCCAGGGGGATCACCCTGGTGGGCATGATGCAGGGTGCCTTTCTCCCTCCAGTCTaGGGGTCCCCACAAATGCCC +
Preference number: 4 (lower is better)
Translates to: PEMVHPRGITLVGMMQGAFLPPV*GSPQMP
Trigger: GGGCATTTGTGGGGACCCCCAGACTGGAGGGAGAAA...GGCACCCTGCATCATGCCCACCAGGGTGATCCCCCTGGGATGGACCATCTCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR TCA 90 bp AGCCCAACCCTGGCACTTGCTCGGGGACAATCACTGGGCATCTGCCAGGACGAACTCACGTGGGTGGCCTaGAGAGTCCACTGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: SPTLALARGQSLGICQDELTWVA*RVHCLA
Trigger: TGCCAGGCAGTGGACTCTTCAGGCCACCCACGTGAG...TTCGTCCTGGCAGATGCCCAGTGATTGTCCCCGAGCAAGTGCCAGGGTTGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CCA 90 bp GAAGCCAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGTGGAGGATCTTCCGGCTaGCCCTGGCCATTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: EAKGRQQVRATCQASPHGGGSSG*PWPLAA
Trigger: GGCTGCCAATGGCCAGGGCCAGCCGGAAGATCCTCC...ACCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTGGCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553782.1
ENST00000555004.3
CDS-3UTR CCA 90 bp CCAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGTGGTGCTTCTGCTGGGCTCCTaGGTGTTGGCCAGGGAGGGT +
Preference number: 4 (lower is better)
Translates to: PKADSKSELRAKPHPMVVLLLGS*VLAREG
Trigger: ACCCTCCCTGGCCAACACCCAGGAGCCCAGCAGAAG...CACCACCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CCA 90 bp CCCGAGATGGTCCATCCCAGGGGGATCACCCTGGTGGGCATGATGCAGGGTGCCGTCCCTTTTCCTGCTTaGAAGCTGTGGGCTCTGTCC +
Preference number: 4 (lower is better)
Translates to: PEMVHPRGITLVGMMQGAVPFPA*KLWALS
Trigger: GGACAGAGCCCACAGCTTCCAAGCAGGAAAAGGGAC...GGCACCCTGCATCATGCCCACCAGGGTGATCCCCCTGGGATGGACCATCTCGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CCA 90 bp AGCCCAACCCTGGCACTTGCTCGGGGACAATCACTGGGCATCTGCCAGGACGAAGCTCAGCCACGTGGATaGGGCTCGGTGTGGAATGGG +
Preference number: 4 (lower is better)
Translates to: SPTLALARGQSLGICQDEAQPRG*GSVWNG
Trigger: CCCATTCCACACCGAGCCCCATCCACGTGGCTGAGC...TTCGTCCTGGCAGATGCCCAGTGATTGTCCCCGAGCAAGTGCCAGGGTTGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR CAA 72 bp CCTCCCTGTCATAGCAGCTCAGCCCAACCCTGGCACTaGCTCGGGGACAATCACTGGGCATCTGCCAGGACG +
Preference number: 4 (lower is better)
Translates to: PPCHSSSAQPWH*LGDNHWASART
Trigger: CGTCCTGGCAGATGCCCAGTGATTGTCCCCGAGCAAGTGCCAGGGTTGGGCTGAGCTGCTATGACAGGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR TCA 90 bp GCCAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGTGGTGGGAGTACTCGGTGCTaGAGTCCTCGTTGGGCGAGT +
Preference number: 4 (lower is better)
Translates to: AKGRQQVRATCQASPHGGGSTRC*SPRWAS
Trigger: ACTCGCCCAACGAGGACTTCAGCACCGAGTACTCCC...ACCACCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553764.1
ENST00000553782.1
ENST00000555004.3
CDS-3UTR TCA 90 bp CCAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGTGGTGGCCGTCCTCAGAAGGTaGAGGCATACACCACGCCCA +
Preference number: 4 (lower is better)
Translates to: PKADSKSELRAKPHPMVVAVLRR*RHTPRP
Trigger: TGGGCGTGGTGTATGCCTTCACCTTCTGAGGACGGC...CACCACCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553764.1
ENST00000553782.1
ENST00000555004.3
CDS-3UTR TCA 90 bp CAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGTGGTGCGCCGTCCTCAGAAGGTaGAGGCATACACCACGCCCA +
Preference number: 4 (lower is better)
Translates to: QRPTASQSYVPSLTPWWCAVLRR*RHTPRP
Trigger: TGGGCGTGGTGTATGCCTTCACCTTCTGAGGACGGC...GCACCACCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553764.1
ENST00000553782.1
ENST00000555004.3
CDS-3UTR TCA 90 bp AGCCCAACCCTGGCACTTGCTCGGGGACAATCACTGGGCATCTGCCAGGACGAATCACCCTGGTGGGCATaGTGCAGGGTGCCTCTAGAG +
Preference number: 4 (lower is better)
Translates to: SPTLALARGQSLGICQDESPWWA*CRVPLE
Trigger: CTCTAGAGGCACCCTGCATCATGCCCACCAGGGTGA...TTCGTCCTGGCAGATGCCCAGTGATTGTCCCCGAGCAAGTGCCAGGGTTGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR TCA 90 bp CCAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGTGGTGTTCCCTTTGGCTCCCTaGGCAGAACTCCCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: PKADSKSELRAKPHPMVVFPLAP*AELPGP
Trigger: AGGCCCAGGGAGTTCTGCTCAGGGAGCCAAAGGGAA...CACCACCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR GCA 90 bp CAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGTGGTGCGATCCATGGTGTCGCTaGAGCCAGCGCTCGAGTCCT +
Preference number: 4 (lower is better)
Translates to: QRPTASQSYVPSLTPWWCDPWCR*SQRSSP
Trigger: AGGACTCGAGCGCTGGCTGCAGCGACACCATGGATC...GCACCACCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553764.1
ENST00000553782.1
ENST00000555004.3
CDS-3UTR GCA 90 bp CCAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGTGGTGGATCCATGGTGTCGCTaGAGCCAGCGCTCGAGTCCT +
Preference number: 4 (lower is better)
Translates to: PKADSKSELRAKPHPMVVDPWCR*SQRSSP
Trigger: AGGACTCGAGCGCTGGCTGCAGCGACACCATGGATC...CACCACCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553764.1
ENST00000553782.1
ENST00000555004.3
CDS-3UTR GCA 90 bp CAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGTGGTGCTTGAACTCCTGTCCCTaGCCGCCTCGGCCTCCCAAA +
Preference number: 4 (lower is better)
Translates to: QRPTASQSYVPSLTPWWCLNSCP*PPRPPK
Trigger: TTTGGGAGGCCGAGGCGGGCAGGGACAGGAGTTCAA...GCACCACCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR GCA 90 bp AGCCAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGTGGACTGAACGCACAACGTaGTGGACCACGGACCCCTGG +
Preference number: 4 (lower is better)
Translates to: SQRPTASQSYVPSLTPWWTERTT*WTTDPW
Trigger: CCAGGGGTCCGTGGTCCAGCACGTTGTGCGTTCAGT...CCACCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR GCA 90 bp AGAAGCCAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGGGGACACAGGGGTGTTaGTCAGCCACGTGGATGGGG +
Preference number: 4 (lower is better)
Translates to: RSQRPTASQSYVPSLTPWGTQGC*SATWMG
Trigger: CCCCATCCACGTGGCTGAGCAACACCCCTGTGTCCC...CCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTGGCTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CCA 90 bp CCAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGTGGTGCAAGCAACCCCGCCATaGCTCTGGGCTTCTCGCCTT +
Preference number: 4 (lower is better)
Translates to: PKADSKSELRAKPHPMVVQATPP*LWASRL
Trigger: AAGGCGAGAAGCCCAGAGCCATGGCGGGGTTGCTTG...CACCACCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CCA 90 bp AGCCCAACCCTGGCACTTGCTCGGGGACAATCACTGGGCATCTGCCAGGACGAAACAGTCAGGGACCTGTaGAAGCCAGAGCTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: SPTLALARGQSLGICQDETVRDL*KPELAQ
Trigger: CTGGGCCAGCTCTGGCTTCCACAGGTCCCTGACTGT...TTCGTCCTGGCAGATGCCCAGTGATTGTCCCCGAGCAAGTGCCAGGGTTGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CCA 90 bp CAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGTGGTGCAGCAAAGCGGGCCGATaGCAGCTGCAGGGAGCACAA +
Preference number: 4 (lower is better)
Translates to: QRPTASQSYVPSLTPWWCSKAGR*QLQGAQ
Trigger: TTGTGCTCCCTGCAGCTGCCATCGGCCCGCTTTGCT...GCACCACCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR TCA 90 bp GGATTTATTTCCAAGGCAGAATGGGGCTCAAACCTCCTCTTGGGGAGGCAGGAATGGCGGGGATCGGGCTaGGCAGCGAGCGTCCGGAGA +
Preference number: 4 (lower is better)
Translates to: GFISKAEWGSNLLLGRQEWRGSG*AASVRR
Trigger: TCTCCGGACGCTCGCTGCTCAGCCCGATCCCCGCCA...TTCCTGCCTCCCCAAGAGGAGGTTTGAGCCCCATTCTGCCTTGGAAATAAATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR TCA 90 bp CAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGTGGTGCGGAACACTGAAGTTCTaGGGGCTGCTCTTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: QRPTASQSYVPSLTPWWCGTLKF*GLLLPQ
Trigger: CTGGGGCAAGAGCAGCCCTCAGAACTTCAGTGTTCC...GCACCACCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR TCA 90 bp CCAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGTGGTGGCATGTGGGGCAGAGTaGCTCCATGAGGACGTCAAG +
Preference number: 4 (lower is better)
Translates to: PKADSKSELRAKPHPMVVACGAE*LHEDVK
Trigger: CTTGACGTCCTCATGGAGTCACTCTGCCCCACATGC...CACCACCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR TCA 90 bp AGCCAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGTGGTCCAAGCCTTCCAGCTaGACCGGGGCTGGAAAAGCA +
Preference number: 4 (lower is better)
Translates to: SQRPTASQSYVPSLTPWWSKPSS*TGAGKA
Trigger: TGCTTTTCCAGCCCCGGTTCAGCTGGAAGGCTTGGA...CCACCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR GCA 90 bp CCAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGTGGTGTGGTGGTGCAGGGTGTaGCGTCCTCAGAAGGTGAAG +
Preference number: 4 (lower is better)
Translates to: PKADSKSELRAKPHPMVVWWCRV*RPQKVK
Trigger: CTTCACCTTCTGAGGACGGCACACCCTGCACCACCA...CACCACCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553764.1
ENST00000553782.1
ENST00000555004.3
CDS-3UTR GCA 90 bp GCCAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGTGGTTGGTGGTGCAGGGTGTaGCGTCCTCAGAAGGTGAAG +
Preference number: 4 (lower is better)
Translates to: AKGRQQVRATCQASPHGGWWCRV*RPQKVK
Trigger: CTTCACCTTCTGAGGACGGCACACCCTGCACCACCA...ACCACCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553764.1
ENST00000553782.1
ENST00000555004.3
CDS-3UTR GCA 90 bp AGCCCAACCCTGGCACTTGCTCGGGGACAATCACTGGGCATCTGCCAGGACGAACAAGGATCCCCAATCTaGCCTCTGAAGGCCTTGCCC +
Preference number: 4 (lower is better)
Translates to: SPTLALARGQSLGICQDEQGSPI*PLKALP
Trigger: GGGCAAGGCCTTCAGAGGGCAGATTGGGGATCCTTG...TTCGTCCTGGCAGATGCCCAGTGATTGTCCCCGAGCAAGTGCCAGGGTTGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR GCA 90 bp GGGCCTTGTGTAAATGTGCCCTGGAGGTGCCACCCAGTCACAGAAGGCAGTACAGCCAGAAGCACCCGGTaGCTGGGATGCTGGAGTCCT +
Preference number: 4 (lower is better)
Translates to: GPCVNVPWRCHPVTEGSTARSTR*LGCWSP
Trigger: AGGACTCCAGCATCCCAGGCACCGGGTGCTTCTGGC...TGTACTGCCTTCTGTGACTGGGTGGCACCTCCAGGGCACATTTACACAAGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR GCA 90 bp CAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGTGGTGCGGTCGAGGCCTCCAATaGCCTGGACCATCTACTGCT +
Preference number: 4 (lower is better)
Translates to: QRPTASQSYVPSLTPWWCGRGLQ*PGPSTA
Trigger: AGCAGTAGATGGTCCAGGGCATTGGAGGCCTCGACC...GCACCACCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CCA 90 bp CCAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGTGGTGGCAAGACGGCGTCGTTaGAGGACCGAGGAGGATCTT +
Preference number: 4 (lower is better)
Translates to: PKADSKSELRAKPHPMVVARRRR*RTEEDL
Trigger: AAGATCCTCCTCGGTCCTCCAACGACGCCGTCTTGC...CACCACCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553764.1
ENST00000553782.1
ENST00000555004.3
CDS-3UTR CCA 90 bp GCCAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGTGGTGCAAGACGGCGTCGTTaGAGGACCGAGGAGGATCTT +
Preference number: 4 (lower is better)
Translates to: AKGRQQVRATCQASPHGGARRRR*RTEEDL
Trigger: AAGATCCTCCTCGGTCCTCCAACGACGCCGTCTTGC...ACCACCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553764.1
ENST00000553782.1
ENST00000555004.3
CDS-3UTR CCA 90 bp CCCGAGATGGTCCATCCCAGGGGGATCACCCTGGTGGGCATGATGCAGGGTGCCGGACCAGGTGTCTGGTaGCAAAGGTGCCATTTCAAA +
Preference number: 4 (lower is better)
Translates to: PEMVHPRGITLVGMMQGAGPGVW*QRCHFK
Trigger: TTTGAAATGGCACCTTTGCCACCAGACACCTGGTCC...GGCACCCTGCATCATGCCCACCAGGGTGATCCCCCTGGGATGGACCATCTCGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CCA 90 bp AGCCAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGTGGCACAGGAGACCAAGATaGGGCAACCCCGAGGAAGTC +
Preference number: 4 (lower is better)
Translates to: SQRPTASQSYVPSLTPWWHRRPR*GNPEEV
Trigger: GACTTCCTCGGGGTTGCCCCATCTTGGTCTCCTGTG...CCACCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CCA 90 bp GTAAAGGACGGGTATCTGAGCAGCCTGCCAATCTCGCACCCACCTTCAAGATGCGAAGGGGGCAGGCCTTaGGGACCGGCACCCCTGAAA +
Preference number: 4 (lower is better)
Translates to: VKDGYLSSLPISHPPSRCEGGRP*GPAPLK
Trigger: TTTCAGGGGTGCCGGTCCCCAAGGCCTGCCCCCTTC...GCATCTTGAAGGTGGGTGCGAGATTGGCAGGCTGCTCAGATACCCGTCCTTTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CCA 90 bp AAGCCAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGTGTGTGGGTGCTTCTGCTaGGCTCCTGGGTGTTGGCCA +
Preference number: 4 (lower is better)
Translates to: KPKADSKSELRAKPHPMVCGCFC*APGCWP
Trigger: TGGCCAACACCCAGGAGCCCAGCAGAAGCACCCACA...CACCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTGGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CCA 90 bp CAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGTGGTGCGTTCGGTGGCATCCCTaGCCTCCACCCATGAGATAC +
Preference number: 4 (lower is better)
Translates to: QRPTASQSYVPSLTPWWCVRWHP*PPPMRY
Trigger: GTATCTCATGGGTGGAGGCCAGGGATGCCACCGAAC...GCACCACCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR CAA 72 bp GCCAGAGCTGGCCCAGGCCACACCATGACGGGCATCTaGAGAAACAGCCTCTGCAGATTCAGGGCCTTGTGT +
Preference number: 4 (lower is better)
Translates to: ARAGPGHTMTGI*RNSLCRFRALC
Trigger: ACACAAGGCCCTGAATCTGCAGAGGCTGTTTCTCAAGATGCCCGTCATGGTGTGGCCTGGGCCAGCTCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR TCA 90 bp GAAGGACAGCATTGGCTTGGAGTAGGAAGAGCTGCGCCATCATCCTGCCTGGGTGCCGTCCTCAGAAGGTaGAGGCATACACCACGCCCA +
Preference number: 4 (lower is better)
Translates to: EGQHWLGVGRAAPSSCLGAVLRR*RHTPRP
Trigger: TGGGCGTGGTGTATGCCTTCACCTTCTGAGGACGGC...ACCCAGGCAGGATGATGGCGCAGCTCTTCCTACTCCAAGCCAATGCTGTCCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR TCA 90 bp GAAGGACAGCATTGGCTTGGAGTAGGAAGAGCTGCGCCATCATCCTGCCTGGGTCAGTGGGCGGGAGGTTaGGCATGTTCCACTCTGAGG +
Preference number: 4 (lower is better)
Translates to: EGQHWLGVGRAAPSSCLGQWAGG*ACSTLR
Trigger: CCTCAGAGTGGAACATGCTCAACCTCCCGCCCACTG...ACCCAGGCAGGATGATGGCGCAGCTCTTCCTACTCCAAGCCAATGCTGTCCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR TCA 90 bp GTAAAGGACGGGTATCTGAGCAGCCTGCCAATCTCGCACCCACCTTCAAGATGCCTCCATCCCTCTCCGTaGGTGACCATGGTCAGGGGC +
Preference number: 4 (lower is better)
Translates to: VKDGYLSSLPISHPPSRCLHPSP*VTMVRG
Trigger: GCCCCTGACCATGGTCACTCACGGAGAGGGATGGAG...GCATCTTGAAGGTGGGTGCGAGATTGGCAGGCTGCTCAGATACCCGTCCTTTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR GCA 90 bp AGCCAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGTGGCAAGTCAGAGCTACGTaGCAAGCCTCACCCCATGGT +
Preference number: 4 (lower is better)
Translates to: SQRPTASQSYVPSLTPWWQVRAT*QASPHG
Trigger: ACCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTG...CCACCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000553764.1
ENST00000553782.1
ENST00000555004.3
CDS-3UTR GCA 90 bp AGCCAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGTGGACCTCCTCAGGGAAGTaGTTAGTTGGGGCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: SQRPTASQSYVPSLTPWWTSSGK*LVGAES
Trigger: GCTCTCTGCCCCAACTAAGCACTTCCCTGAGGAGGT...CCACCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR GCA 90 bp GCCAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGTGGTCAGGCTCACTTGACCTaGGCGGCCATAAAGGAGAGA +
Preference number: 4 (lower is better)
Translates to: AKGRQQVRATCQASPHGGQAHLT*AAIKER
Trigger: TCTCTCCTTTATGGCCGCGCAGGTCAAGTGAGCCTG...ACCACCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553764.1
CDS-3UTR CCA 90 bp CCAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGTGGTGCCATTGGCAGCCGCGTaGACATTGGCAGAGGAGTTA +
Preference number: 4 (lower is better)
Translates to: PKADSKSELRAKPHPMVVPLAAA*TLAEEL
Trigger: TAACTCCTCTGCCAATGTCCACGCGGCTGCCAATGG...CACCACCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553764.1
ENST00000553782.1
ENST00000555004.3
CDS-3UTR CCA 90 bp CAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGTGGTGCAGGCCTCCAATGCCCTaGACCATCTACTGCTCTGAC +
Preference number: 4 (lower is better)
Translates to: QRPTASQSYVPSLTPWWCRPPMP*TIYCSD
Trigger: GTCAGAGCAGTAGATGGTCCAGGGCATTGGAGGCCT...GCACCACCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CCA 90 bp GAAGGACAGCATTGGCTTGGAGTAGGAAGAGCTGCGCCATCATCCTGCCTGGGTTGTGGAAGCCAGAGCTaGCCCAGGCCACACCATGAC +
Preference number: 4 (lower is better)
Translates to: EGQHWLGVGRAAPSSCLGCGSQS*PRPHHD
Trigger: GTCATGGTGTGGCCTGGGCCAGCTCTGGCTTCCACA...ACCCAGGCAGGATGATGGCGCAGCTCTTCCTACTCCAAGCCAATGCTGTCCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CCA 90 bp AGCCAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGTGGCTTGTAGAGGAGCAATaGAGGGGCACACAGAGGGGT +
Preference number: 4 (lower is better)
Translates to: SQRPTASQSYVPSLTPWWLVEEQ*RGTQRG
Trigger: ACCCCTCTGTGTGCCCCTCCATTGCTCCTCTACAAG...CCACCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CCA 90 bp AGAAGCCAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGCGCCATCATCCTGCCTaGGTCCCTGGAAGCACAAGT +
Preference number: 4 (lower is better)
Translates to: RSQRPTASQSYVPSLTPWRHHPA*VPGSTS
Trigger: ACTTGTGCTTCCAGGGACCCAGGCAGGATGATGGCG...CCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTGGCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CCA 90 bp CCAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGTGGTGCCTCATATCCCGAGATaGTCCATCCCAGGGGGATCA +
Preference number: 4 (lower is better)
Translates to: PKADSKSELRAKPHPMVVPHIPR*SIPGGS
Trigger: TGATCCCCCTGGGATGGACCATCTCGGGATATGAGG...CACCACCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CCA 90 bp GAAGCCAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGTAGCTCAGCCCAACCCTaGCACTTGCTCGGGGACAAT +
Preference number: 4 (lower is better)
Translates to: EAKGRQQVRATCQASPHGSSAQP*HLLGDN
Trigger: ATTGTCCCCGAGCAAGTGCCAGGGTTGGGCTGAGCT...ACCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTGGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CCA 90 bp AGCCAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGTGGGTGGCAACGGCAGACTaGAAAGGAGTTAGGCTGGTC +
Preference number: 4 (lower is better)
Translates to: SQRPTASQSYVPSLTPWWVATAD*KGVRLV
Trigger: GACCAGCCTAACTCCTTTCCAGTCTGCCGTTGCCAC...CCACCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553764.1
CDS-3UTR CCA 90 bp AGAAGCCAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGCCCTGGAGCCAGCTCTaGGTCTTCTCTAGGGTCACA +
Preference number: 4 (lower is better)
Translates to: RSQRPTASQSYVPSLTPWPWSQL*VFSRVT
Trigger: TGTGACCCTAGAGAAGACCCAGAGCTGGCTCCAGGG...CCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTGGCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553782.1
CDS-3UTR TCA 90 bp GTAAAGGACGGGTATCTGAGCAGCCTGCCAATCTCGCACCCACCTTCAAGATGCGTTAGGGCTGGAGGCTaGGGGGCCTCCATAGGGAAA +
Preference number: 4 (lower is better)
Translates to: VKDGYLSSLPISHPPSRCVRAGG*GASIGK
Trigger: TTTCCCTATGGAGGCCCCTCAGCCTCCAGCCCTAAC...GCATCTTGAAGGTGGGTGCGAGATTGGCAGGCTGCTCAGATACCCGTCCTTTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR TCA 90 bp AGAAGCCAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGAAGACCCCTGTCTCCTaGAAAGCTCCACCTGGCAAC +
Preference number: 4 (lower is better)
Translates to: RSQRPTASQSYVPSLTPWKTPVS*KAPPGN
Trigger: GTTGCCAGGTGGAGCTTTTCAGGAGACAGGGGTCTT...CCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTGGCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR GCA 90 bp ACTTCTGGCTGTAGTGAGCCTCTTTCTACGTGTGGGTGCTTCTGCTGGGCTCCTGATCCATGGTGTCGCTaGAGCCAGCGCTCGAGTCCT +
Preference number: 4 (lower is better)
Translates to: TSGCSEPLSTCGCFCWAPDPWCR*SQRSSP
Trigger: AGGACTCGAGCGCTGGCTGCAGCGACACCATGGATC...AGGAGCCCAGCAGAAGCACCCACACGTAGAAAGAGGCTCACTACAGCCAGAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR GCA 90 bp GAAGCCAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGTCAAGTCAGAGCTACGTaGCAAGCCTCACCCCATGGT +
Preference number: 4 (lower is better)
Translates to: EAKGRQQVRATCQASPHGQVRAT*QASPHG
Trigger: ACCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTG...ACCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTGGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553782.1
ENST00000555004.3
CDS-3UTR GCA 90 bp AGCCCAACCCTGGCACTTGCTCGGGGACAATCACTGGGCATCTGCCAGGACGAAGCTTCCAGGGAAGAGTaGCGCTTCTGGACAACTAAG +
Preference number: 4 (lower is better)
Translates to: SPTLALARGQSLGICQDEASREE*RFWTTK
Trigger: CTTAGTTGTCCAGAAGCGGCACTCTTCCCTGGAAGC...TTCGTCCTGGCAGATGCCCAGTGATTGTCCCCGAGCAAGTGCCAGGGTTGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR GCA 90 bp GAAGCCAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGTCTGCATCCTCATTCCTaGCCCCAGGGGCAATTTGAG +
Preference number: 4 (lower is better)
Translates to: EAKGRQQVRATCQASPHGLHPHS*PQGQFE
Trigger: CTCAAATTGCCCCTGGGGGCAGGAATGAGGATGCAG...ACCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTGGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR GCA 90 bp GAAGGACAGCATTGGCTTGGAGTAGGAAGAGCTGCGCCATCATCCTGCCTGGGTCCCGGGCAAGCCCTTTaGTTCCCACTGAACGCACAA +
Preference number: 4 (lower is better)
Translates to: EGQHWLGVGRAAPSSCLGPGQAL*FPLNAQ
Trigger: TTGTGCGTTCAGTGGGAAGCAAAGGGCTTGCCCGGG...ACCCAGGCAGGATGATGGCGCAGCTCTTCCTACTCCAAGCCAATGCTGTCCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CCA 90 bp AAGCCAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGTGCCATTGGCAGCCGCGTaGACATTGGCAGAGGAGTTA +
Preference number: 4 (lower is better)
Translates to: KPKADSKSELRAKPHPMVPLAAA*TLAEEL
Trigger: TAACTCCTCTGCCAATGTCCACGCGGCTGCCAATGG...CACCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553764.1
ENST00000553782.1
ENST00000555004.3
CDS-3UTR CCA 90 bp CCAGTGATTCCAGGAATTCCAGACAGGTGGTCCATGTCCCTTCTCCCTCATTGTGGAGGATCTTCCGGCTaGCCCTGGCCATTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: PVIPGIPDRWSMSLLPHCGGSSG*PWPLAA
Trigger: GGCTGCCAATGGCCAGGGCCAGCCGGAAGATCCTCC...ACAATGAGGGAGAAGGGACATGGACCACCTGTCTGGAATTCCTGGAATCACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CCA 90 bp AAGCCAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGTGGTCTCCCAATGCACTTaGGTCTTGGAAGGGACCAGG +
Preference number: 4 (lower is better)
Translates to: KPKADSKSELRAKPHPMVVSQCT*VLEGTR
Trigger: CCTGGTCCCTTCCAAGACCCAAGTGCATTGGGAGAC...CACCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CCA 90 bp GTAAAGGACGGGTATCTGAGCAGCCTGCCAATCTCGCACCCACCTTCAAGATGCCGACTGCCATCTCCATaGGCCATTTGGAGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: VKDGYLSSLPISHPPSRCRLPSP*AIWRPG
Trigger: CCCTGGCCTCCAAATGGCCCATGGAGATGGCAGTCG...GCATCTTGAAGGTGGGTGCGAGATTGGCAGGCTGCTCAGATACCCGTCCTTTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CCA 90 bp CAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGTGGTGCTGTGTAAATGTGCCCTaGAGGTGCCACCCAGTCACA +
Preference number: 4 (lower is better)
Translates to: QRPTASQSYVPSLTPWWCCVNVP*RCHPVT
Trigger: TGTGACTGGGTGGCACCTCCAGGGCACATTTACACA...GCACCACCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CCA 90 bp CTCGCATTATTTGAACGCAGGGCAGTGACCATGATCACTGCTGCTGCTCAGAAGTGGGCTCCTGGGTGTTaGCCAGGGAGGGTCCCCTTC +
Preference number: 4 (lower is better)
Translates to: LALFERRAVTMITAAAQKWAPGC*PGRVPF
Trigger: GAAGGGGACCCTCCCTGGCCAACACCCAGGAGCCCA...CTTCTGAGCAGCAGCAGTGATCATGGTCACTGCCCTGCGTTCAAATAATGCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CCA 90 bp CCAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGTGGTGGGGGAAGGACAGCATTaGCTTGGAGTAGGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: PKADSKSELRAKPHPMVVGEGQH*LGVGRA
Trigger: AGCTCTTCCTACTCCAAGCCAATGCTGTCCTTCCCC...CACCACCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CCA 90 bp CCAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGTGGTGGTGGGCTCTGTCCTCTaGGTTCTCAGTACTCAGTTC +
Preference number: 4 (lower is better)
Translates to: PKADSKSELRAKPHPMVVVGSVL*VLSTQF
Trigger: GAACTGAGTACTGAGAACCCAGAGGACAGAGCCCAC...CACCACCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CCA 90 bp AGCCAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGTGGCCCATCATGGGCAGCTaGAAGAACTCCAAGTGGCAA +
Preference number: 4 (lower is better)
Translates to: SQRPTASQSYVPSLTPWWPIMGS*KNSKWQ
Trigger: TTGCCACTTGGAGTTCTTCCAGCTGCCCATGATGGG...CCACCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553764.1
3UTR CAA 72 bp GTCTCTGGGAGCTTCACCGGGGCCTTCCAAGGAGACTaGAGTTCAGTCTTAAAGAAGGGGGCAGGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: VSGSFTGAFQGD*SSVLKKGAGLG
Trigger: CCCAAGGCCTGCCCCCTTCTTTAAGACTGAACTCAAGTCTCCTTGGAAGGCCCCGGTGAAGCTCCCAGAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR TCA 90 bp GGATTTATTTCCAAGGCAGAATGGGGCTCAAACCTCCTCTTGGGGAGGCAGGAACCCCAATCTGCCCTCTaGAGGCCTTGCCCCGTCATG +
Preference number: 4 (lower is better)
Translates to: GFISKAEWGSNLLLGRQEPQSAL*RPCPVM
Trigger: CATGACGGGGCAAGGCCTTCAGAGGGCAGATTGGGG...TTCCTGCCTCCCCAAGAGGAGGTTTGAGCCCCATTCTGCCTTGGAAATAAATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR TCA 90 bp CTAAGAGACCACATGACATGCTGGGAGTTGCAGATCACTGTCCTCAGCTCGCATGGGCCTAGAGGTGAGTaGGCCCCCTTCTGGGACCTT +
Preference number: 4 (lower is better)
Translates to: LRDHMTCWELQITVLSSHGPRGE*APFWDL
Trigger: AAGGTCCCAGAAGGGGGCTCACTCACCTCTAGGCCC...ATGCGAGCTGAGGACAGTGATCTGCAACTCCCAGCATGTCATGTGGTCTCTTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR TCA 90 bp GAGGTTCTGGAACTGATAAATCCCTGTGCACTGCCGCCTGCCCCTTTCCTGGACGAGCATGTTCCACTCTaGGGACAGTCAGGGACCTGT +
Preference number: 4 (lower is better)
Translates to: EVLELINPCALPPAPFLDEHVPL*GQSGTC
Trigger: ACAGGTCCCTGACTGTCCTCAGAGTGGAACATGCTC...GTCCAGGAAAGGGGCAGGCGGCAGTGCACAGGGATTTATCAGTTCCAGAACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR TCA 90 bp CTGACTCAGCTTGACCACAACATGGGATATTTGAAATCAGGGCTGCTGGGGAGATGGCCAGGCTGGTCTTaGACTCCTGTCCCTGCCCGC +
Preference number: 4 (lower is better)
Translates to: LTQLDHNMGYLKSGLLGRWPGWS*TPVPAR
Trigger: GCGGGCAGGGACAGGAGTTCAAGACCAGCCTGGCCA...TCTCCCCAGCAGCCCTGATTTCAAATATCCCATGTTGTGGTCAAGCTGAGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR TCA 90 bp AGAAGCCAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGGGACCCAAGAGCAGATaGCAGCCTTGCCAAATGTCT +
Preference number: 4 (lower is better)
Translates to: RSQRPTASQSYVPSLTPWGPKSR*QPCQMS
Trigger: AGACATTTGGCAAGGCTGTCATCTGCTCTTGGGTCC...CCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTGGCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR TCA 90 bp ACTTCTGGCTGTAGTGAGCCTCTTTCTACGTGTGGGTGCTTCTGCTGGGCTCCTCTTCATATGCATTGGTaGGGGGCCAGGTCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: TSGCSEPLSTCGCFCWAPLHMHW*GARSLE
Trigger: CTCCAGGGACCTGGCCCCTCACCAATGCATATGAAG...AGGAGCCCAGCAGAAGCACCCACACGTAGAAAGAGGCTCACTACAGCCAGAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR TCA 90 bp AGCCAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGTGGAGGCTGGTCCATGCATaGTTTGGCATCCTCACTTGT +
Preference number: 4 (lower is better)
Translates to: SQRPTASQSYVPSLTPWWRLVHA*FGILTC
Trigger: ACAAGTGAGGATGCCAAATCATGCATGGACCAGCCT...CCACCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553764.1
CDS-3UTR GCA 90 bp GGGCCTTGTGTAAATGTGCCCTGGAGGTGCCACCCAGTCACAGAAGGCAGTACATGGAGGCCAGGGAGCTaGCTCCTGTATCTTTACAGG +
Preference number: 4 (lower is better)
Translates to: GPCVNVPWRCHPVTEGSTWRPGS*LLYLYR
Trigger: CCTGTAAAGATACAGGAGGCAGCTCCCTGGCCTCCA...TGTACTGCCTTCTGTGACTGGGTGGCACCTCCAGGGCACATTTACACAAGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR GCA 90 bp GAAGGACAGCATTGGCTTGGAGTAGGAAGAGCTGCGCCATCATCCTGCCTGGGTACGGGTGTGAGTCACTaGACCCAGCCTAAGTTGCTC +
Preference number: 4 (lower is better)
Translates to: EGQHWLGVGRAAPSSCLGTGVSH*TQPKLL
Trigger: GAGCAACTTAGGCTGGGTGCAGTGACTCACACCCGT...ACCCAGGCAGGATGATGGCGCAGCTCTTCCTACTCCAAGCCAATGCTGTCCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CCA 90 bp GTAAAGGACGGGTATCTGAGCAGCCTGCCAATCTCGCACCCACCTTCAAGATGCTGTTGCTCAGCCACGTaGATGGGGCTCGGTGTGGAA +
Preference number: 4 (lower is better)
Translates to: VKDGYLSSLPISHPPSRCCCSAT*MGLGVE
Trigger: TTCCACACCGAGCCCCATCCACGTGGCTGAGCAACA...GCATCTTGAAGGTGGGTGCGAGATTGGCAGGCTGCTCAGATACCCGTCCTTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CCA 90 bp CAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGTGGTGCGTGAAACCAGGTGCTTaGGTAGCAAAGGACTCCAAG +
Preference number: 4 (lower is better)
Translates to: QRPTASQSYVPSLTPWWCVKPGA*VAKDSK
Trigger: CTTGGAGTCCTTTGCTACCCAAGCACCTGGTTTCAC...GCACCACCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR TCA 90 bp GGGCCTTGTGTAAATGTGCCCTGGAGGTGCCACCCAGTCACAGAAGGCAGTACAAACACTCATTTCTCCTaGGACCACAGCGGCAAGTCC +
Preference number: 4 (lower is better)
Translates to: GPCVNVPWRCHPVTEGSTNTHFS*DHSGKS
Trigger: GGACTTGCCGCTGTGGTCTCAGGAGAAATGAGTGTT...TGTACTGCCTTCTGTGACTGGGTGGCACCTCCAGGGCACATTTACACAAGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR TCA 90 bp AGAAGCCAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGGGCAGGAAATCAGCTTaGAAAAGGACCCAAGAGCAG +
Preference number: 4 (lower is better)
Translates to: RSQRPTASQSYVPSLTPWGRKSA*KRTQEQ
Trigger: CTGCTCTTGGGTCCTTTTTCAAGCTGATTTCCTGCC...CCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTGGCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR GCA 90 bp GAGGTTCTGGAACTGATAAATCCCTGTGCACTGCCGCCTGCCCCTTTCCTGGACACTCCTCCACAAACCTaGCTGGTGACCACAGGCAAA +
Preference number: 4 (lower is better)
Translates to: EVLELINPCALPPAPFLDTPPQT*LVTTGK
Trigger: TTTGCCTGTGGTCACCAGGCAGGTTTGTGGAGGAGT...GTCCAGGAAAGGGGCAGGCGGCAGTGCACAGGGATTTATCAGTTCCAGAACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR GCA 90 bp CTGACTCAGCTTGACCACAACATGGGATATTTGAAATCAGGGCTGCTGGGGAGAACCCGGTGCCTGGGATaGTGGAGTCCTCTTCAGGGC +
Preference number: 4 (lower is better)
Translates to: LTQLDHNMGYLKSGLLGRTRCLG*WSPLQG
Trigger: GCCCTGAAGAGGACTCCAGCATCCCAGGCACCGGGT...TCTCCCCAGCAGCCCTGATTTCAAATATCCCATGTTGTGGTCAAGCTGAGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR GCA 90 bp AGCCAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGTGGGAAGTCACTGTAATCTaGAATGCAGAGTGGTCGAGG +
Preference number: 4 (lower is better)
Translates to: SQRPTASQSYVPSLTPWWEVTVI*NAEWSR
Trigger: CCTCGACCACTCTGCATTGCAGATTACAGTGACTTC...CCACCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR GCA 90 bp CTCGCATTATTTGAACGCAGGGCAGTGACCATGATCACTGCTGCTGCTCAGAAGAGGCAGGAGGGAGAGTaGAGCTCGCTGTGGCCAGAA +
Preference number: 4 (lower is better)
Translates to: LALFERRAVTMITAAAQKRQEGE*SSLWPE
Trigger: TTCTGGCCACAGCGAGCTGCACTCTCCCTCCTGCCT...CTTCTGAGCAGCAGCAGTGATCATGGTCACTGCCCTGCGTTCAAATAATGCGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR GCA 90 bp CTAAGAGACCACATGACATGCTGGGAGTTGCAGATCACTGTCCTCAGCTCGCATACGTGTGGGTGCTTCTaGTGGGCTCCTGGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: LRDHMTCWELQITVLSSHTCGCF*WAPGCW
Trigger: CCAACACCCAGGAGCCCAGCAGAAGCACCCACACGT...ATGCGAGCTGAGGACAGTGATCTGCAACTCCCAGCATGTCATGTGGTCTCTTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR GCA 90 bp CCAGTGATTCCAGGAATTCCAGACAGGTGGTCCATGTCCCTTCTCCCTCATTGTCCCAACCCTGGCACTTaGTCGGGGACAATCACTGGG +
Preference number: 4 (lower is better)
Translates to: PVIPGIPDRWSMSLLPHCPNPGT*SGTITG
Trigger: CCCAGTGATTGTCCCCGAGCAAGTGCCAGGGTTGGG...ACAATGAGGGAGAAGGGACATGGACCACCTGTCTGGAATTCCTGGAATCACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CCA 90 bp TCCTTGCTTGCCAGGACCCCAGATGCTGATATTTCAGAATTTAAGGAAGTGGCTTCTTCCGGCTGGCCCTaGCCATTGGCAGCCGCGTGG +
Preference number: 4 (lower is better)
Translates to: SLLARTPDADISEFKEVASSGWP*PLAAAW
Trigger: CCACGCGGCTGCCAATGGCCAGGGCCAGCCGGAAGA...AGCCACTTCCTTAAATTCTGAAATATCAGCATCTGGGGTCCTGGCAAGCAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CCA 90 bp CTCGCATTATTTGAACGCAGGGCAGTGACCATGATCACTGCTGCTGCTCAGAAGGACGGCCGCCGCCCCTaGTCAAAACTCCTGGTTCTA +
Preference number: 4 (lower is better)
Translates to: LALFERRAVTMITAAAQKDGRRP*SKLLVL
Trigger: TAGAACCAGGAGTTTTGACCAGGGGCGGCGGCCGTC...CTTCTGAGCAGCAGCAGTGATCATGGTCACTGCCCTGCGTTCAAATAATGCGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CCA 90 bp GAAGGACAGCATTGGCTTGGAGTAGGAAGAGCTGCGCCATCATCCTGCCTGGGTGGAATTCCAGACAGGTaGTCCATGTCCCTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: EGQHWLGVGRAAPSSCLGGIPDR*SMSLLP
Trigger: AGGGAGAAGGGACATGGACCACCTGTCTGGAATTCC...ACCCAGGCAGGATGATGGCGCAGCTCTTCCTACTCCAAGCCAATGCTGTCCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CCA 90 bp CTCGCATTATTTGAACGCAGGGCAGTGACCATGATCACTGCTGCTGCTCAGAAGTCTCCATGGGCCATTTaGAGGCCAGGGAGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: LALFERRAVTMITAAAQKSPWAI*RPGSCL
Trigger: GAGGCAGCTCCCTGGCCTCCAAATGGCCCATGGAGA...CTTCTGAGCAGCAGCAGTGATCATGGTCACTGCCCTGCGTTCAAATAATGCGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR CAA 72 bp TGTCTCCAGACATTGCTGATGGCCCCCAGCCCTTCCTaGAGAACGACTGGCCTCATGAAAGCCACCACTAAG +
Preference number: 4 (lower is better)
Translates to: CLQTLLMAPSPS*RTTGLMKATTK
Trigger: CTTAGTGGTGGCTTTCATGAGGCCAGTCGTTCTCAAGGAAGGGCTGGGGGCCATCAGCAATGTCTGGAGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR TCA 90 bp GTAAGACACAAAAACATTTCCGATGCTCTCGGCATGAAGAATTGGTATCTGGAGTGGCGGGGATCGGGCTaGGCAGCGAGCGTCCGGAGA +
Preference number: 4 (lower is better)
Translates to: VRHKNISDALGMKNWYLEWRGSG*AASVRR
Trigger: TCTCCGGACGCTCGCTGCTCAGCCCGATCCCCGCCA...CTCCAGATACCAATTCTTCATGCCGAGAGCATCGGAAATGTTTTTGTGTCTTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000555004.3
ENST00000556728.1
CDS-3UTR TCA 90 bp CTAAGAGACCACATGACATGCTGGGAGTTGCAGATCACTGTCCTCAGCTCGCATAAGAACTGGCAGCCATaGGCAGGCACTGTCTGGAGC +
Preference number: 4 (lower is better)
Translates to: LRDHMTCWELQITVLSSHKNWQP*AGTVWS
Trigger: GCTCCAGACAGTGCCTGCTCATGGCTGCCAGTTCTT...ATGCGAGCTGAGGACAGTGATCTGCAACTCCCAGCATGTCATGTGGTCTCTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR TCA 90 bp GAAGGACAGCATTGGCTTGGAGTAGGAAGAGCTGCGCCATCATCCTGCCTGGGTCACTTTCATGCTGTGTaGCCTCAGGAAGGCAACTTC +
Preference number: 4 (lower is better)
Translates to: EGQHWLGVGRAAPSSCLGHFHAV*PQEGNF
Trigger: GAAGTTGCCTTCCTGAGGTCACACAGCATGAAAGTG...ACCCAGGCAGGATGATGGCGCAGCTCTTCCTACTCCAAGCCAATGCTGTCCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR TCA 90 bp GGGCCTTGTGTAAATGTGCCCTGGAGGTGCCACCCAGTCACAGAAGGCAGTACATCAGCTCGCATTATTTaGACGCAGGGCAGTGACCAT +
Preference number: 4 (lower is better)
Translates to: GPCVNVPWRCHPVTEGSTSARII*TQGSDH
Trigger: ATGGTCACTGCCCTGCGTTCAAATAATGCGAGCTGA...TGTACTGCCTTCTGTGACTGGGTGGCACCTCCAGGGCACATTTACACAAGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR TCA 90 bp AGAAGCCAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGTCTAGGGTCACAGACTaGTGGAGAAATCCGGGATTT +
Preference number: 4 (lower is better)
Translates to: RSQRPTASQSYVPSLTPWSRVTD*WRNPGF
Trigger: AAATCCCGGATTTCTCCATCAGTCTGTGACCCTAGA...CCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTGGCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553782.1
CDS-3UTR GCA 90 bp AGAGAAGTCAGTGATCGCATGGTGAAACCAGGTGCTTGGGTAGCAAAGGACTCCCCCATCATGGGCAGCTaGGCGGCCATAAAGGAGAGA +
Preference number: 4 (lower is better)
Translates to: REVSDRMVKPGAWVAKDSPIMGS*AAIKER
Trigger: TCTCTCCTTTATGGCCGCGCAGCTGCCCATGATGGG...GGAGTCCTTTGCTACCCAAGCACCTGGTTTCACCATGCGATCACTGACTTCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555004.3
ENST00000556728.1
CDS-3UTR GCA 90 bp CTAAGAGACCACATGACATGCTGGGAGTTGCAGATCACTGTCCTCAGCTCGCATCCCTGGGTCTCCCAATaGACTTGGGTCTTGGAAGGG +
Preference number: 4 (lower is better)
Translates to: LRDHMTCWELQITVLSSHPWVSQ*TWVLEG
Trigger: CCCTTCCAAGACCCAAGTGCATTGGGAGACCCAGGG...ATGCGAGCTGAGGACAGTGATCTGCAACTCCCAGCATGTCATGTGGTCTCTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR GCA 90 bp AGAGAGCTCAGTGAGCTGAGAGTGAGGACACATCTTTCTGTTCCGACTCCTCCACTTTCTACGTGTGGGTaGTTCTGCTGGGCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: RELSELRVRTHLSVPTPPLSTCG*FCWAPG
Trigger: CCCAGGAGCCCAGCAGAAGCACCCACACGTAGAAAG...TGGAGGAGTCGGAACAGAAAGATGTGTCCTCACTCTCAGCTCACTGAGCTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR GCA 90 bp TGGTGGAAACAGTCACATGGATTTCTAAGAGACCACATGACATGCTGGGAGTTGCGGGCCGATGGCAGCTaGAGGGAGCACAACCCACCT +
Preference number: 4 (lower is better)
Translates to: WWKQSHGFLRDHMTCWELRADGS*REHNPP
Trigger: AGGTGGGTTGTGCTCCCTGCAGCTGCCATCGGCCCG...CAACTCCCAGCATGTCATGTGGTCTCTTAGAAATCCATGTGACTGTTTCCACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR GCA 90 bp CCAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGTGGTGGATTTGTCTTTGTTCTaGGCGGCCATAAAGGAGAGA +
Preference number: 4 (lower is better)
Translates to: PKADSKSELRAKPHPMVVDLSLF*AAIKER
Trigger: TCTCTCCTTTATGGCCGCGCAGAACAAAGACAAATC...CACCACCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553782.1
CDS-3UTR CCA 90 bp GGGCCTTGTGTAAATGTGCCCTGGAGGTGCCACCCAGTCACAGAAGGCAGTACACTGGGCTTCTCGCCTTaGGTTTTCTCATGGAGACAT +
Preference number: 4 (lower is better)
Translates to: GPCVNVPWRCHPVTEGSTLGFSP*VFSWRH
Trigger: ATGTCTCCATGAGAAAACCCAAGGCGAGAAGCCCAG...TGTACTGCCTTCTGTGACTGGGTGGCACCTCCAGGGCACATTTACACAAGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CCA 90 bp GAGGTTCTGGAACTGATAAATCCCTGTGCACTGCCGCCTGCCCCTTTCCTGGACAGAATCATTTCTCTCTaGGGGGTAGAGTGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: EVLELINPCALPPAPFLDRIISL*GVEWSR
Trigger: CCTGCTCCACTCTACCCCCCAGAGAGAAATGATTCT...GTCCAGGAAAGGGGCAGGCGGCAGTGCACAGGGATTTATCAGTTCCAGAACCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CCA 90 bp GGATTTATTTCCAAGGCAGAATGGGGCTCAAACCTCCTCTTGGGGAGGCAGGAAGCCTTGCCAAATGTCTaGATGGAGCCATCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: GFISKAEWGSNLLLGRQEALPNV*MEPSGQ
Trigger: CTGCCCGGATGGCTCCATCCAGACATTTGGCAAGGC...TTCCTGCCTCCCCAAGAGGAGGTTTGAGCCCCATTCTGCCTTGGAAATAAATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CCA 90 bp GAGGTTCTGGAACTGATAAATCCCTGTGCACTGCCGCCTGCCCCTTTCCTGGACTTCCTTGAGAACGACTaGCCTCATGAAAGCCACCAC +
Preference number: 4 (lower is better)
Translates to: EVLELINPCALPPAPFLDFLEND*PHESHH
Trigger: GTGGTGGCTTTCATGAGGCCAGTCGTTCTCAAGGAA...GTCCAGGAAAGGGGCAGGCGGCAGTGCACAGGGATTTATCAGTTCCAGAACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR TCA 90 bp AGCCCAACCCTGGCACTTGCTCGGGGACAATCACTGGGCATCTGCCAGGACGAAAACAAGACACACGAGTaGTTATTTACCACCAGCAAG +
Preference number: 4 (lower is better)
Translates to: SPTLALARGQSLGICQDENKTHE*LFTTSK
Trigger: CTTGCTGGTGGTAAATAATCACTCGTGTGTCTTGTT...TTCGTCCTGGCAGATGCCCAGTGATTGTCCCCGAGCAAGTGCCAGGGTTGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR TCA 90 bp CTGACTCAGCTTGACCACAACATGGGATATTTGAAATCAGGGCTGCTGGGGAGACACAAACCTGCCTGGTaGCCACAGGCAAATCACCCC +
Preference number: 4 (lower is better)
Translates to: LTQLDHNMGYLKSGLLGRHKPAW*PQANHP
Trigger: GGGGTGATTTGCCTGTGGTCACCAGGCAGGTTTGTG...TCTCCCCAGCAGCCCTGATTTCAAATATCCCATGTTGTGGTCAAGCTGAGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR TCA 90 bp GGATTTATTTCCAAGGCAGAATGGGGCTCAAACCTCCTCTTGGGGAGGCAGGAACCTCCACCCTGCCAGTaGTTCCAGGAATTCCAGACA +
Preference number: 4 (lower is better)
Translates to: GFISKAEWGSNLLLGRQEPPPCQ*FQEFQT
Trigger: TGTCTGGAATTCCTGGAATCACTGGCAGGGTGGAGG...TTCCTGCCTCCCCAAGAGGAGGTTTGAGCCCCATTCTGCCTTGGAAATAAATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR TCA 90 bp AAGCACTTTCACAGCTTCAGGAGAATGCACGGTATCCACACTGAATGTAAAGGAAAGACGGACCCCGGCTaGGGCAGGAGGGAGAGTGCA +
Preference number: 4 (lower is better)
Translates to: KHFHSFRRMHGIHTECKGKTDPG*GRRESA
Trigger: TGCACTCTCCCTCCTGCCTCAGCCGGGGTCCGTCTT...TCCTTTACATTCAGTGTGGATACCGTGCATTCTCCTGAAGCTGTGAAAGTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR GCA 90 bp GTAAGACACAAAAACATTTCCGATGCTCTCGGCATGAAGAATTGGTATCTGGAGTGCGGGTCAGCCGCCTaGACAGTTGGCGGGGATCGG +
Preference number: 4 (lower is better)
Translates to: VRHKNISDALGMKNWYLECGSAA*TVGGDR
Trigger: CCGATCCCCGCCAACTGTGCAGGCGGCTGACCCGCA...CTCCAGATACCAATTCTTCATGCCGAGAGCATCGGAAATGTTTTTGTGTCTTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000555004.3
ENST00000556728.1
CDS-3UTR GCA 90 bp CTAAGAGACCACATGACATGCTGGGAGTTGCAGATCACTGTCCTCAGCTCGCATCTATCTGCACTGGGATaGTGCCTTGGGAAGGTGTGG +
Preference number: 4 (lower is better)
Translates to: LRDHMTCWELQITVLSSHLSALG*CLGKVW
Trigger: CCACACCTTCCCAAGGCAGCATCCCAGTGCAGATAG...ATGCGAGCTGAGGACAGTGATCTGCAACTCCCAGCATGTCATGTGGTCTCTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR GCA 90 bp GCCAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGTGGTACTAAGATGTCCCTTTaGCTGTCATCAAGAACACTC +
Preference number: 4 (lower is better)
Translates to: AKGRQQVRATCQASPHGGTKMSL*LSSRTL
Trigger: GAGTGTTCTTGATGACAGGCAAAGGGACATCTTAGT...ACCACCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR GCA 90 bp GTAAAGGACGGGTATCTGAGCAGCCTGCCAATCTCGCACCCACCTTCAAGATGCAGGGTCAGGTTCTTTTaGACTCGTGACCTCCCCTTA +
Preference number: 4 (lower is better)
Translates to: VKDGYLSSLPISHPPSRCRVRFF*TRDLPL
Trigger: TAAGGGGAGGTCACGAGTGCAAAAGAACCTGACCCT...GCATCTTGAAGGTGGGTGCGAGATTGGCAGGCTGCTCAGATACCCGTCCTTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR GCA 90 bp GGATTTATTTCCAAGGCAGAATGGGGCTCAAACCTCCTCTTGGGGAGGCAGGAAACCCTGTCTCCCGACTaGCATCTCCATGGGCCATTT +
Preference number: 4 (lower is better)
Translates to: GFISKAEWGSNLLLGRQETLSPD*HLHGPF
Trigger: AAATGGCCCATGGAGATGGCAGTCGGGAGACAGGGT...TTCCTGCCTCCCCAAGAGGAGGTTTGAGCCCCATTCTGCCTTGGAAATAAATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR GCA 90 bp CTCGCATTATTTGAACGCAGGGCAGTGACCATGATCACTGCTGCTGCTCAGAAGCTCCATAGGGAAAACTaGAGCCAGAAGCACCCGGTG +
Preference number: 4 (lower is better)
Translates to: LALFERRAVTMITAAAQKLHREN*SQKHPV
Trigger: CACCGGGTGCTTCTGGCTGCAGTTTTCCCTATGGAG...CTTCTGAGCAGCAGCAGTGATCATGGTCACTGCCCTGCGTTCAAATAATGCGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR GCA 90 bp AGTAATCCTATTAACATGGCGGCTTCCAGGGAAGAGTGCCGCTTCTGGACAACTAATGTGCCCTGGAGGTaGCACCCAGTCACAGAAGGC +
Preference number: 4 (lower is better)
Translates to: SNPINMAASREECRFWTTNVPWR*HPVTEG
Trigger: GCCTTCTGTGACTGGGTGGCACCTCCAGGGCACATT...AGTTGTCCAGAAGCGGCACTCTTCCCTGGAAGCCGCCATGTTAATAGGATTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR GCA 90 bp CAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGTGGTGCAAGAAACCCAGTAAATaGTCAAGGTCTGAGCTCAGA +
Preference number: 4 (lower is better)
Translates to: QRPTASQSYVPSLTPWWCKKPSK*SRSELR
Trigger: TCTGAGCTCAGACCTTGAGCATTTACTGGGTTTCTT...GCACCACCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CCA 90 bp AGAGAAGTCAGTGATCGCATGGTGAAACCAGGTGCTTGGGTAGCAAAGGACTCCCCATTGGCAGCCGCGTaGACATTGGCAGAGGAGTTA +
Preference number: 4 (lower is better)
Translates to: REVSDRMVKPGAWVAKDSPLAAA*TLAEEL
Trigger: TAACTCCTCTGCCAATGTCCACGCGGCTGCCAATGG...GGAGTCCTTTGCTACCCAAGCACCTGGTTTCACCATGCGATCACTGACTTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555004.3
ENST00000556728.1
CDS-3UTR CCA 90 bp GTAAGACACAAAAACATTTCCGATGCTCTCGGCATGAAGAATTGGTATCTGGAGTCTTCCGGCTGGCCCTaGCCATTGGCAGCCGCGTGG +
Preference number: 4 (lower is better)
Translates to: VRHKNISDALGMKNWYLESSGWP*PLAAAW
Trigger: CCACGCGGCTGCCAATGGCCAGGGCCAGCCGGAAGA...CTCCAGATACCAATTCTTCATGCCGAGAGCATCGGAAATGTTTTTGTGTCTTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555004.3
ENST00000556728.1
CDS-3UTR CCA 90 bp CCAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGTGGTGCAGAATTTAAGGAAGTaGCTTGGGCAGAAGCACTTT +
Preference number: 4 (lower is better)
Translates to: PKADSKSELRAKPHPMVVQNLRK*LGQKHF
Trigger: AAAGTGCTTCTGCCCAAGCCACTTCCTTAAATTCTG...CACCACCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CCA 90 bp CAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGTGGTGCTCTCTGGTTTTTACTTaGAAGCTTCCTTGCTTGCCA +
Preference number: 4 (lower is better)
Translates to: QRPTASQSYVPSLTPWWCSLVFT*KLPCLP
Trigger: TGGCAAGCAAGGAAGCTTCCAAGTAAAAACCAGAGA...GCACCACCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CCA 90 bp AGAGAAGTCAGTGATCGCATGGTGAAACCAGGTGCTTGGGTAGCAAAGGACTCCCCACTCTATCTGCACTaGGATGCTGCCTTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: REVSDRMVKPGAWVAKDSPLYLH*DAALGR
Trigger: CCTTCCCAAGGCAGCATCCCAGTGCAGATAGAGTGG...GGAGTCCTTTGCTACCCAAGCACCTGGTTTCACCATGCGATCACTGACTTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CCA 90 bp GGATTTATTTCCAAGGCAGAATGGGGCTCAAACCTCCTCTTGGGGAGGCAGGAAGAGTGCAGCTCGCTGTaGCCAGAAATCCAGCCTTTG +
Preference number: 4 (lower is better)
Translates to: GFISKAEWGSNLLLGRQEECSSL*PEIQPL
Trigger: CAAAGGCTGGATTTCTGGCCACAGCGAGCTGCACTC...TTCCTGCCTCCCCAAGAGGAGGTTTGAGCCCCATTCTGCCTTGGAAATAAATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CCA 90 bp AGAGAGCTCAGTGAGCTGAGAGTGAGGACACATCTTTCTGTTCCGACTCCTCCAGGCTACAGCGGCGTCTaGCCTCTTCTCAAAGACCTT +
Preference number: 4 (lower is better)
Translates to: RELSELRVRTHLSVPTPPGYSGV*PLLKDL
Trigger: AAGGTCTTTGAGAAGAGGCCAGACGCCGCTGTAGCC...TGGAGGAGTCGGAACAGAAAGATGTGTCCTCACTCTCAGCTCACTGAGCTCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CCA 90 bp GGATTTATTTCCAAGGCAGAATGGGGCTCAAACCTCCTCTTGGGGAGGCAGGAAGTGAGCGTTCAGCCCTaGCCTCAGTTTTCTCCACAG +
Preference number: 4 (lower is better)
Translates to: GFISKAEWGSNLLLGRQEVSVQP*PQFSPQ
Trigger: CTGTGGAGAAAACTGAGGCCAGGGCTGAACGCTCAC...TTCCTGCCTCCCCAAGAGGAGGTTTGAGCCCCATTCTGCCTTGGAAATAAATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CCA 90 bp AAGCACTTTCACAGCTTCAGGAGAATGCACGGTATCCACACTGAATGTAAAGGAGAACGCACAACGTGCTaGACCACGGACCCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: KHFHSFRRMHGIHTECKGERTTC*TTDPWA
Trigger: GGCCCAGGGGTCCGTGGTCCAGCACGTTGTGCGTTC...TCCTTTACATTCAGTGTGGATACCGTGCATTCTCCTGAAGCTGTGAAAGTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CCA 90 bp CCAGTGATTCCAGGAATTCCAGACAGGTGGTCCATGTCCCTTCTCCCTCATTGTGGGCTCGGTGTGGAATaGGCTCTGATTCCCCCAATA +
Preference number: 4 (lower is better)
Translates to: PVIPGIPDRWSMSLLPHCGLGVE*ALIPPI
Trigger: TATTGGGGGAATCAGAGCCCATTCCACACCGAGCCC...ACAATGAGGGAGAAGGGACATGGACCACCTGTCTGGAATTCCTGGAATCACTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CCA 90 bp CTCGCATTATTTGAACGCAGGGCAGTGACCATGATCACTGCTGCTGCTCAGAAGGAATCAGAGATAGGATaGCCAGCACAGGGTCCCCTG +
Preference number: 4 (lower is better)
Translates to: LALFERRAVTMITAAAQKESEIG*PAQGPL
Trigger: CAGGGGACCCTGTGCTGGCCATCCTATCTCTGATTC...CTTCTGAGCAGCAGCAGTGATCATGGTCACTGCCCTGCGTTCAAATAATGCGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CCA 90 bp AAGCCAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGTGCTCGGCATGAAGAATTaGTATCTGGAGAGTAGCAAG +
Preference number: 4 (lower is better)
Translates to: KPKADSKSELRAKPHPMVLGMKN*YLESSK
Trigger: CTTGCTACTCTCCAGATACCAATTCTTCATGCCGAG...CACCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CCA 90 bp CCAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGTGGTGGGTCCATGCATGATTTaGCATCCTCACTTGTTATTC +
Preference number: 4 (lower is better)
Translates to: PKADSKSELRAKPHPMVVGPCMI*HPHLLF
Trigger: GAATAACAAGTGAGGATGCCAAATCATGCATGGACC...CACCACCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553764.1
CDS-3UTR TCA 90 bp GTAAAGGACGGGTATCTGAGCAGCCTGCCAATCTCGCACCCACCTTCAAGATGCACAACATGGGATATTTaGAATCAGGGCTGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: VKDGYLSSLPISHPPSRCTTWDI*NQGCWG
Trigger: TCCCCAGCAGCCCTGATTTCAAATATCCCATGTTGT...GCATCTTGAAGGTGGGTGCGAGATTGGCAGGCTGCTCAGATACCCGTCCTTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR TCA 90 bp TCCTTGCTTGCCAGGACCCCAGATGCTGATATTTCAGAATTTAAGGAAGTGGCTATCCCTCTCCGTGAGTaGCCATGGTCAGGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: SLLARTPDADISEFKEVAIPLRE*PWSGAC
Trigger: ACAGGCCCCTGACCATGGTCACTCACGGAGAGGGAT...AGCCACTTCCTTAAATTCTGAAATATCAGCATCTGGGGTCCTGGCAAGCAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR TCA 90 bp CTTCCAGGGAAGAGTGCCGCTTCTGGACAACTAAGATGTCCCTTTGCCTGTCATGAGAAAGACAGCCAGTaGGACAGATACAGGGGACAC +
Preference number: 4 (lower is better)
Translates to: LPGKSAASGQLRCPFACHEKDSQ*DRYRGH
Trigger: GTGTCCCCTGTATCTGTCTCACTGGCTGTCTTTCTC...ATGACAGGCAAAGGGACATCTTAGTTGTCCAGAAGCGGCACTCTTCCCTGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR GCA 90 bp GAGGTTCTGGAACTGATAAATCCCTGTGCACTGCCGCCTGCCCCTTTCCTGGACACAGCTTCAGGAGAATaGACGGTATCCACACTGAAT +
Preference number: 4 (lower is better)
Translates to: EVLELINPCALPPAPFLDTASGE*TVSTLN
Trigger: ATTCAGTGTGGATACCGTGCATTCTCCTGAAGCTGT...GTCCAGGAAAGGGGCAGGCGGCAGTGCACAGGGATTTATCAGTTCCAGAACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR GCA 90 bp CCAGTGATTCCAGGAATTCCAGACAGGTGGTCCATGTCCCTTCTCCCTCATTGTCTTTCCCACTCTATCTaGACTGGGATGCTGCCTTGG +
Preference number: 4 (lower is better)
Translates to: PVIPGIPDRWSMSLLPHCLSHSI*TGMLPW
Trigger: CCAAGGCAGCATCCCAGTGCAGATAGAGTGGGAAAG...ACAATGAGGGAGAAGGGACATGGACCACCTGTCTGGAATTCCTGGAATCACTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR GCA 90 bp AGAAGCCAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGAGCAACAAAAAGATGTaGAAAACTGGCACCGGTAAG +
Preference number: 4 (lower is better)
Translates to: RSQRPTASQSYVPSLTPWSNKKM*KTGTGK
Trigger: CTTACCGGTGCCAGTTTTGCACATCTTTTTGTTGCT...CCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTGGCTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR GCA 90 bp CCAGTGATTCCAGGAATTCCAGACAGGTGGTCCATGTCCCTTCTCCCTCATTGTAGAGGTCCCTTTTCCTaGTTGGAAGCTGTGGGCTCT +
Preference number: 4 (lower is better)
Translates to: PVIPGIPDRWSMSLLPHCRGPFS*LEAVGS
Trigger: AGAGCCCACAGCTTCCAAGCAGGAAAAGGGACCTCT...ACAATGAGGGAGAAGGGACATGGACCACCTGTCTGGAATTCCTGGAATCACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR GCA 90 bp AAATATACACGAGAGCTTCCTAACCAGCTTTTTAAGTTTCTCCACTACAGAGGGGGGCAGGCGCGAGGCTaGCGCCACGGTCAAAAGACC +
Preference number: 4 (lower is better)
Translates to: KYTRELPNQLFKFLHYRGGQARG*RHGQKT
Trigger: GGTCTTTTGACCGTGGCGGCAGCCTCGCGCCTGCCC...CCCTCTGTAGTGGAGAAACTTAAAAAGCTGGTTAGGAAGCTCTCGTGTATATTT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR GCA 90 bp AGAAGCCAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGCCAATAATCGAGGCCTaGAAATTCCCTGCAAATATG +
Preference number: 4 (lower is better)
Translates to: RSQRPTASQSYVPSLTPWPIIEA*KFPANM
Trigger: CATATTTGCAGGGAATTTGCAGGCCTCGATTATTGG...CCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTGGCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR GCA 90 bp CTCGCATTATTTGAACGCAGGGCAGTGACCATGATCACTGCTGCTGCTCAGAAGGATTTGCTCAAAGGCTaGTACCCAGCACTCCCATGC +
Preference number: 4 (lower is better)
Translates to: LALFERRAVTMITAAAQKDLLKG*YPALPC
Trigger: GCATGGGAGTGCTGGGTAGCAGCCTTTGAGCAAATC...CTTCTGAGCAGCAGCAGTGATCATGGTCACTGCCCTGCGTTCAAATAATGCGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR GCA 90 bp AGCCAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGTGGCAAAAACATTTCCGATaGTCTCGGCATGAAGAATTG +
Preference number: 4 (lower is better)
Translates to: SQRPTASQSYVPSLTPWWQKHFR*SRHEEL
Trigger: CAATTCTTCATGCCGAGAGCATCGGAAATGTTTTTG...CCACCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CCA 90 bp CTCGCATTATTTGAACGCAGGGCAGTGACCATGATCACTGCTGCTGCTCAGAAGAAGGGACCAGGTGTCTaGTGGCAAAGGTGCCATTTC +
Preference number: 4 (lower is better)
Translates to: LALFERRAVTMITAAAQKKGPGV*WQRCHF
Trigger: GAAATGGCACCTTTGCCACCAGACACCTGGTCCCTT...CTTCTGAGCAGCAGCAGTGATCATGGTCACTGCCCTGCGTTCAAATAATGCGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CCA 90 bp CTCGCATTATTTGAACGCAGGGCAGTGACCATGATCACTGCTGCTGCTCAGAAGAATGCACTTGGGTCTTaGAAGGGACCAGGTGTCTGG +
Preference number: 4 (lower is better)
Translates to: LALFERRAVTMITAAAQKNALGS*KGPGVW
Trigger: CCAGACACCTGGTCCCTTCCAAGACCCAAGTGCATT...CTTCTGAGCAGCAGCAGTGATCATGGTCACTGCCCTGCGTTCAAATAATGCGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CCA 90 bp CTGACTCAGCTTGACCACAACATGGGATATTTGAAATCAGGGCTGCTGGGGAGAAGGACAGCATTGGCTTaGAGTAGGAAGAGCTGCGCC +
Preference number: 4 (lower is better)
Translates to: LTQLDHNMGYLKSGLLGRRTALA*SRKSCA
Trigger: GGCGCAGCTCTTCCTACTCCAAGCCAATGCTGTCCT...TCTCCCCAGCAGCCCTGATTTCAAATATCCCATGTTGTGGTCAAGCTGAGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CCA 90 bp CCAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGTGGTGAACGCAGTAATGGTGTaGTTCTTTAAGAAACTGGGA +
Preference number: 4 (lower is better)
Translates to: PKADSKSELRAKPHPMVVNAVMV*FFKKLG
Trigger: TCCCAGTTTCTTAAAGAACCACACCATTACTGCGTT...CACCACCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR TCA 90 bp AGTAATCCTATTAACATGGCGGCTTCCAGGGAAGAGTGCCGCTTCTGGACAACTTTGGGTCAGGAACACTaGAGTTCTGAGGGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: SNPINMAASREECRFWTTLGQEH*SSEGCS
Trigger: AGAGCAGCCCTCAGAACTTCAGTGTTCCTGACCCAA...AGTTGTCCAGAAGCGGCACTCTTCCCTGGAAGCCGCCATGTTAATAGGATTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR TCA 90 bp TCCTTGCTTGCCAGGACCCCAGATGCTGATATTTCAGAATTTAAGGAAGTGGCTGCCTGGACATTCTCCTaGGGGCAGCTTCTCAGCAAC +
Preference number: 4 (lower is better)
Translates to: SLLARTPDADISEFKEVAAWTFS*GQLLSN
Trigger: GTTGCTGAGAAGCTGCCCTCAGGAGAATGTCCAGGC...AGCCACTTCCTTAAATTCTGAAATATCAGCATCTGGGGTCCTGGCAAGCAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR TCA 90 bp AAGCACTTTCACAGCTTCAGGAGAATGCACGGTATCCACACTGAATGTAAAGGAGGCAGAGTGACTCCATaGGGACGTCAAGCAACCCCG +
Preference number: 4 (lower is better)
Translates to: KHFHSFRRMHGIHTECKGGRVTP*GRQATP
Trigger: CGGGGTTGCTTGACGTCCTCATGGAGTCACTCTGCC...TCCTTTACATTCAGTGTGGATACCGTGCATTCTCCTGAAGCTGTGAAAGTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR TCA 90 bp CTTCCAGGGAAGAGTGCCGCTTCTGGACAACTAAGATGTCCCTTTGCCTGTCATGCTCCAGGGAGTCTTTaGTCGTCTTCAGTCATGAAG +
Preference number: 4 (lower is better)
Translates to: LPGKSAASGQLRCPFACHAPGSL*SSSVMK
Trigger: CTTCATGACTGAAGACGATCAAAGACTCCCTGGAGC...ATGACAGGCAAAGGGACATCTTAGTTGTCCAGAAGCGGCACTCTTCCCTGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR TCA 90 bp AAGCACTTTCACAGCTTCAGGAGAATGCACGGTATCCACACTGAATGTAAAGGAGTCTCCAGACATTGCTaGTGGCCCCCAGCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: KHFHSFRRMHGIHTECKGVSRHC*WPPALP
Trigger: AGGAAGGGCTGGGGGCCATCAGCAATGTCTGGAGAC...TCCTTTACATTCAGTGTGGATACCGTGCATTCTCCTGAAGCTGTGAAAGTGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR TCA 90 bp CCAGTGATTCCAGGAATTCCAGACAGGTGGTCCATGTCCCTTCTCCCTCATTGTCCGATGCTCTCGGCATaGAGAATTGGTATCTGGAGA +
Preference number: 4 (lower is better)
Translates to: PVIPGIPDRWSMSLLPHCPMLSA*RIGIWR
Trigger: TCTCCAGATACCAATTCTTCATGCCGAGAGCATCGG...ACAATGAGGGAGAAGGGACATGGACCACCTGTCTGGAATTCCTGGAATCACTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR TCA 90 bp CCAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGTGGTGGCAACGCTAACAAAGTaGGATTTCACAGATACATTT +
Preference number: 4 (lower is better)
Translates to: PKADSKSELRAKPHPMVVATLTK*DFTDTF
Trigger: AAATGTATCTGTGAAATCTCACTTTGTTAGCGTTGC...CACCACCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR GCA 90 bp TGGTGGAAACAGTCACATGGATTTCTAAGAGACCACATGACATGCTGGGAGTTGTGGTGGTGCAGGGTGTaGCGTCCTCAGAAGGTGAAG +
Preference number: 4 (lower is better)
Translates to: WWKQSHGFLRDHMTCWELWWCRV*RPQKVK
Trigger: CTTCACCTTCTGAGGACGGCACACCCTGCACCACCA...CAACTCCCAGCATGTCATGTGGTCTCTTAGAAATCCATGTGACTGTTTCCACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR GCA 90 bp AGTAATCCTATTAACATGGCGGCTTCCAGGGAAGAGTGCCGCTTCTGGACAACTACTTGGAAGCTTCCTTaGTTGCCAGGACCCCAGATG +
Preference number: 4 (lower is better)
Translates to: SNPINMAASREECRFWTTTWKLP*LPGPQM
Trigger: CATCTGGGGTCCTGGCAAGCAAGGAAGCTTCCAAGT...AGTTGTCCAGAAGCGGCACTCTTCCCTGGAAGCCGCCATGTTAATAGGATTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR GCA 90 bp TGGTGGAAACAGTCACATGGATTTCTAAGAGACCACATGACATGCTGGGAGTTGTGGAGTAGGAAGAGCTaGGCCATCATCCTGCCTGGG +
Preference number: 4 (lower is better)
Translates to: WWKQSHGFLRDHMTCWELWSRKS*AIILPG
Trigger: CCCAGGCAGGATGATGGCGCAGCTCTTCCTACTCCA...CAACTCCCAGCATGTCATGTGGTCTCTTAGAAATCCATGTGACTGTTTCCACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CCA 90 bp ATTGGTATCTGGAGAGTAGCAAGTTATAATAGTAAGGTTTCCCATGGTGGTGCAGGAGGATCTTCCGGCTaGCCCTGGCCATTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: IGIWRVASYNSKVSHGGAGGSSG*PWPLAA
Trigger: GGCTGCCAATGGCCAGGGCCAGCCGGAAGATCCTCC...TGCACCACCATGGGAAACCTTACTATTATAACTTGCTACTCTCCAGATACCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556728.1
CDS-3UTR CCA 90 bp GTAAAGGACGGGTATCTGAGCAGCCTGCCAATCTCGCACCCACCTTCAAGATGCGTGTGCCCTTCTCTCTaGTTTTTACTTGGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: VKDGYLSSLPISHPPSRCVCPSL*FLLGSF
Trigger: GAAGCTTCCAAGTAAAAACCAGAGAGAAGGGCACAC...GCATCTTGAAGGTGGGTGCGAGATTGGCAGGCTGCTCAGATACCCGTCCTTTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CCA 90 bp CCAGTGATTCCAGGAATTCCAGACAGGTGGTCCATGTCCCTTCTCCCTCATTGTCCTTGCAGAACAAGATaGTCCCAGGACTCTGACTCT +
Preference number: 4 (lower is better)
Translates to: PVIPGIPDRWSMSLLPHCPCRTR*SQDSDS
Trigger: AGAGTCAGAGTCCTGGGACCATCTTGTTCTGCAAGG...ACAATGAGGGAGAAGGGACATGGACCACCTGTCTGGAATTCCTGGAATCACTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CCA 90 bp GTAAAGGACGGGTATCTGAGCAGCCTGCCAATCTCGCACCCACCTTCAAGATGCCACAAATGCCCAAGATaGTGGAAACAGTCACATGGA +
Preference number: 4 (lower is better)
Translates to: VKDGYLSSLPISHPPSRCHKCPR*WKQSHG
Trigger: TCCATGTGACTGTTTCCACCATCTTGGGCATTTGTG...GCATCTTGAAGGTGGGTGCGAGATTGGCAGGCTGCTCAGATACCCGTCCTTTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR CAA 72 bp AATTCCAGACAGGTGGTCCATGTCCCTTCTCCCTCATaGTCAAGGGTCAGGTTCTTTTGCACTCGTGACCTC +
Preference number: 4 (lower is better)
Translates to: NSRQVVHVPSPS*SRVRFFCTRDL
Trigger: GAGGTCACGAGTGCAAAAGAACCTGACCCTTGACAATGAGGGAGAAGGGACATGGACCACCTGTCTGGAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR CAA 72 bp TTGACCTTGATTTCATGGGAAAGGGGAAGGACAGCATaGGCTTGGAGTAGGAAGAGCTGCGCCATCATCCTG +
Preference number: 4 (lower is better)
Translates to: LTLISWERGRTA*AWSRKSCAIIL
Trigger: CAGGATGATGGCGCAGCTCTTCCTACTCCAAGCCAATGCTGTCCTTCCCCTTTCCCATGAAATCAAGGTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR CAA 72 bp AGGTTGGAAGCTCCCTTCTGCCAGCATATAGAGCCCTaGTCAGAACCATCTGCATTGTTGGGACAACGCTTC +
Preference number: 4 (lower is better)
Translates to: RLEAPFCQHIEP*SEPSALLGQRF
Trigger: GAAGCGTTGTCCCAACAATGCAGATGGTTCTGACAAGGGCTCTATATGCTGGCAGAAGGGAGCTTCCAACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR CAA 72 bp CCACCAAGCTGTGAGAATCAAAAATGTCTCCAGACATaGCTGATGGCCCCCAGCCCTTCCTTGAGAACGACT +
Preference number: 4 (lower is better)
Translates to: PPSCENQKCLQT*LMAPSPSLRTT
Trigger: AGTCGTTCTCAAGGAAGGGCTGGGGGCCATCAGCAATGTCTGGAGACATTTTTGATTCTCACAGCTTGGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR TCA 90 bp AGAGAGCTCAGTGAGCTGAGAGTGAGGACACATCTTTCTGTTCCGACTCCTCCATTGCAGTGTATAAAGTaGGGAGAAAGCCTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: RELSELRVRTHLSVPTPPLQCIK*GESLSG
Trigger: CCCAGAGAGGCTTTCTCCTCACTTTATACACTGCAA...TGGAGGAGTCGGAACAGAAAGATGTGTCCTCACTCTCAGCTCACTGAGCTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR TCA 90 bp TGGTGGAAACAGTCACATGGATTTCTAAGAGACCACATGACATGCTGGGAGTTGCAGCTAGAGTCTGAATaGGGACGATCCCTCTCCCCT +
Preference number: 4 (lower is better)
Translates to: WWKQSHGFLRDHMTCWELQLESE*GRSLSP
Trigger: AGGGGAGAGGGATCGTCCTCATTCAGACTCTAGCTG...CAACTCCCAGCATGTCATGTGGTCTCTTAGAAATCCATGTGACTGTTTCCACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR GCA 90 bp AGAGAGCTCAGTGAGCTGAGAGTGAGGACACATCTTTCTGTTCCGACTCCTCCATTGAGAAACAGCCTCTaGAGATTCAGGGCCTTGTGT +
Preference number: 4 (lower is better)
Translates to: RELSELRVRTHLSVPTPPLRNSL*RFRALC
Trigger: ACACAAGGCCCTGAATCTGCAGAGGCTGTTTCTCAA...TGGAGGAGTCGGAACAGAAAGATGTGTCCTCACTCTCAGCTCACTGAGCTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR GCA 90 bp GAGGTTCTGGAACTGATAAATCCCTGTGCACTGCCGCCTGCCCCTTTCCTGGACCTGGGAATGAGAAGGTaGTGTGATAATTCTGGTTAT +
Preference number: 4 (lower is better)
Translates to: EVLELINPCALPPAPFLDLGMRR*CDNSGY
Trigger: ATAACCAGAATTATCACAGCACCTTCTCATTCCCAG...GTCCAGGAAAGGGGCAGGCGGCAGTGCACAGGGATTTATCAGTTCCAGAACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR GCA 90 bp CCAGTGATTCCAGGAATTCCAGACAGGTGGTCCATGTCCCTTCTCCCTCATTGTAGTGACCATGATCACTaGTGCTGCTCAGAAGAGCTT +
Preference number: 4 (lower is better)
Translates to: PVIPGIPDRWSMSLLPHCSDHDH*CCSEEL
Trigger: AAGCTCTTCTGAGCAGCAGCAGTGATCATGGTCACT...ACAATGAGGGAGAAGGGACATGGACCACCTGTCTGGAATTCCTGGAATCACTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CCA 90 bp GTAAGACACAAAAACATTTCCGATGCTCTCGGCATGAAGAATTGGTATCTGGAGACCCCGCCATGGCTCTaGGCTTCTCGCCTTGGGTTT +
Preference number: 4 (lower is better)
Translates to: VRHKNISDALGMKNWYLETPPWL*ASRLGF
Trigger: AAACCCAAGGCGAGAAGCCCAGAGCCATGGCGGGGT...CTCCAGATACCAATTCTTCATGCCGAGAGCATCGGAAATGTTTTTGTGTCTTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CCA 90 bp AAGCACTTTCACAGCTTCAGGAGAATGCACGGTATCCACACTGAATGTAAAGGAGGCACCCCTGAAATCTaGGCAGAGAGAGAGCAGTGG +
Preference number: 4 (lower is better)
Translates to: KHFHSFRRMHGIHTECKGGTPEI*AEREQW
Trigger: CCACTGCTCTCTCTCTGCCCAGATTTCAGGGGTGCC...TCCTTTACATTCAGTGTGGATACCGTGCATTCTCCTGAAGCTGTGAAAGTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CCA 90 bp GGGCCTTGTGTAAATGTGCCCTGGAGGTGCCACCCAGTCACAGAAGGCAGTACATTGGCATTTTGGGGCTaGATAATTCTTATTTGTGGG +
Preference number: 4 (lower is better)
Translates to: GPCVNVPWRCHPVTEGSTLAFWG*IILICG
Trigger: CCCACAAATAAGAATTATCCAGCCCCAAAATGCCAA...TGTACTGCCTTCTGTGACTGGGTGGCACCTCCAGGGCACATTTACACAAGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR CAA 72 bp CTGTTAAAGATCTTGCTTATGGGGCAGACCTGGGGTTaGATGGAGAGAGACTTGCTGGAGACAGAGCCATTC +
Preference number: 4 (lower is better)
Translates to: LLKILLMGQTWG*MERDLLETEPF
Trigger: GAATGGCTCTGTCTCCAGCAAGTCTCTCTCCATCAAACCCCAGGTCTGCCCCATAAGCAAGATCTTTAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR CAA 72 bp GGAGAGTGCAGCTCGCTGTGGCCAGAAATCCAGCCTTaGCTCCTTAATCAGACACTAATGGGCATATCTATC +
Preference number: 4 (lower is better)
Translates to: GECSSLWPEIQP*LLNQTLMGISI
Trigger: GATAGATATGCCCATTAGTGTCTGATTAAGGAGCAAAGGCTGGATTTCTGGCCACAGCGAGCTGCACTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR TCA 90 bp CTGACTCAGCTTGACCACAACATGGGATATTTGAAATCAGGGCTGCTGGGGAGAAGATCCTGGGGGATCTaGAAGGAGCGAGAATCATTT +
Preference number: 4 (lower is better)
Translates to: LTQLDHNMGYLKSGLLGRRSWGI*KERESF
Trigger: AAATGATTCTCGCTCCTTTCAGATCCCCCAGGATCT...TCTCCCCAGCAGCCCTGATTTCAAATATCCCATGTTGTGGTCAAGCTGAGTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR TCA 90 bp AGACACAAAAACATTTCCGATGCTCTCGGCATGAAGAATTGGTATCTGGAGAGTCCCTTTGCTTCCCACTaGACGCACAACGTGCTGGAC +
Preference number: 4 (lower is better)
Translates to: RHKNISDALGMKNWYLESPFASH*THNVLD
Trigger: GTCCAGCACGTTGTGCGTTCAGTGGGAAGCAAAGGG...ACTCTCCAGATACCAATTCTTCATGCCGAGAGCATCGGAAATGTTTTTGTGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR GCA 90 bp AGTAAGACACAAAAACATTTCCGATGCTCTCGGCATGAAGAATTGGTATCTGGAGATCCATGGTGTCGCTaGAGCCAGCGCTCGAGTCCT +
Preference number: 4 (lower is better)
Translates to: SKTQKHFRCSRHEELVSGDPWCR*SQRSSP
Trigger: AGGACTCGAGCGCTGGCTGCAGCGACACCATGGATC...TCCAGATACCAATTCTTCATGCCGAGAGCATCGGAAATGTTTTTGTGTCTTACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555004.3
ENST00000556728.1
CDS-3UTR GCA 90 bp AGACACAAAAACATTTCCGATGCTCTCGGCATGAAGAATTGGTATCTGGAGAGTTGGTGGTGCAGGGTGTaGCGTCCTCAGAAGGTGAAG +
Preference number: 4 (lower is better)
Translates to: RHKNISDALGMKNWYLESWWCRV*RPQKVK
Trigger: CTTCACCTTCTGAGGACGGCACACCCTGCACCACCA...ACTCTCCAGATACCAATTCTTCATGCCGAGAGCATCGGAAATGTTTTTGTGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555004.3
ENST00000556728.1
CDS-3UTR GCA 90 bp AGACACAAAAACATTTCCGATGCTCTCGGCATGAAGAATTGGTATCTGGAGAGTCTGTGCACTGCCGCCTaGCCCTTTCCTGGACTTACA +
Preference number: 4 (lower is better)
Translates to: RHKNISDALGMKNWYLESLCTAA*PFPGLT
Trigger: TGTAAGTCCAGGAAAGGGGCAGGCGGCAGTGCACAG...ACTCTCCAGATACCAATTCTTCATGCCGAGAGCATCGGAAATGTTTTTGTGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CCA 90 bp TCCTTGCTTGCCAGGACCCCAGATGCTGATATTTCAGAATTTAAGGAAGTGGCTCTTATGGGGCAGACCTaGGGTTTGATGGAGAGAGAC +
Preference number: 4 (lower is better)
Translates to: SLLARTPDADISEFKEVALMGQT*GLMERD
Trigger: GTCTCTCTCCATCAAACCCCAGGTCTGCCCCATAAG...AGCCACTTCCTTAAATTCTGAAATATCAGCATCTGGGGTCCTGGCAAGCAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CCA 90 bp AGTAAGACACAAAAACATTTCCGATGCTCTCGGCATGAAGAATTGGTATCTGGAGAAGCACCCGGTGCCTaGGATGCTGGAGTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: SKTQKHFRCSRHEELVSGEAPGA*DAGVLF
Trigger: GAAGAGGACTCCAGCATCCCAGGCACCGGGTGCTTC...TCCAGATACCAATTCTTCATGCCGAGAGCATCGGAAATGTTTTTGTGTCTTACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CCA 90 bp TCCTTGCTTGCCAGGACCCCAGATGCTGATATTTCAGAATTTAAGGAAGTGGCTAAGAAAACCAGTCTCTaGGAGCTTCACCGGGGCCTT +
Preference number: 4 (lower is better)
Translates to: SLLARTPDADISEFKEVAKKTSL*ELHRGL
Trigger: AAGGCCCCGGTGAAGCTCCCAGAGACTGGTTTTCTT...AGCCACTTCCTTAAATTCTGAAATATCAGCATCTGGGGTCCTGGCAAGCAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CCA 90 bp TGGTGGAAACAGTCACATGGATTTCTAAGAGACCACATGACATGCTGGGAGTTGGCTCAAACCTCCTCTTaGGGAGGCAGGAAATCAGCT +
Preference number: 4 (lower is better)
Translates to: WWKQSHGFLRDHMTCWELAQTSS*GGRKSA
Trigger: AGCTGATTTCCTGCCTCCCCAAGAGGAGGTTTGAGC...CAACTCCCAGCATGTCATGTGGTCTCTTAGAAATCCATGTGACTGTTTCCACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CCA 90 bp GTAAAGGACGGGTATCTGAGCAGCCTGCCAATCTCGCACCCACCTTCAAGATGCTCAATGACTCACAAATaGGGAAAAGTGGAAAGCATG +
Preference number: 4 (lower is better)
Translates to: VKDGYLSSLPISHPPSRCSMTHK*GKVESM
Trigger: CATGCTTTCCACTTTTCCCCATTTGTGAGTCATTGA...GCATCTTGAAGGTGGGTGCGAGATTGGCAGGCTGCTCAGATACCCGTCCTTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CCA 90 bp AGAGAAGTCAGTGATCGCATGGTGAAACCAGGTGCTTGGGTAGCAAAGGACTCCCTCGGCATGAAGAATTaGTATCTGGAGAGTAGCAAG +
Preference number: 4 (lower is better)
Translates to: REVSDRMVKPGAWVAKDSLGMKN*YLESSK
Trigger: CTTGCTACTCTCCAGATACCAATTCTTCATGCCGAG...GGAGTCCTTTGCTACCCAAGCACCTGGTTTCACCATGCGATCACTGACTTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555004.3
ENST00000556728.1
3UTR CAA 72 bp AAGGCAGATGATGCTTCTGAAGAAGGAAAGTGCCATTaGTCTTGCAGGGATCAGGCAGCAGTGCTGACAACA +
Preference number: 4 (lower is better)
Translates to: KADDASEEGKCH*SCRDQAAVLTT
Trigger: TGTTGTCAGCACTGCTGCCTGATCCCTGCAAGACAAATGGCACTTTCCTTCTTCAGAAGCATCATCTGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR TCA 90 bp CGAAATCCTTTATTAAGAAAGAGTCTTCACTGTAGAGAAGTCAGTGATCGCATGGCCGTCCTCAGAAGGTaGAGGCATACACCACGCCCA +
Preference number: 4 (lower is better)
Translates to: RNPLLRKSLHCREVSDRMAVLRR*RHTPRP
Trigger: TGGGCGTGGTGTATGCCTTCACCTTCTGAGGACGGC...CATGCGATCACTGACTTCTCTACAGTGAAGACTCTTTCTTAATAAAGGATTTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555004.3
ENST00000556728.1
CDS-3UTR TCA 90 bp GGATTTATTTCCAAGGCAGAATGGGGCTCAAACCTCCTCTTGGGGAGGCAGGAATCTTCTGACTCAGCTTaGCCACAACATGGGATATTT +
Preference number: 4 (lower is better)
Translates to: GFISKAEWGSNLLLGRQESSDSA*PQHGIF
Trigger: AAATATCCCATGTTGTGGTCAAGCTGAGTCAGAAGA...TTCCTGCCTCCCCAAGAGGAGGTTTGAGCCCCATTCTGCCTTGGAAATAAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR TCA 90 bp CTGACTCAGCTTGACCACAACATGGGATATTTGAAATCAGGGCTGCTGGGGAGATACTTCCATGTCTTCTaGCTCAGCTTGACCACAACA +
Preference number: 4 (lower is better)
Translates to: LTQLDHNMGYLKSGLLGRYFHVF*LSLTTT
Trigger: TGTTGTGGTCAAGCTGAGTCAGAAGACATGGAAGTA...TCTCCCCAGCAGCCCTGATTTCAAATATCCCATGTTGTGGTCAAGCTGAGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR TCA 90 bp AGACACAAAAACATTTCCGATGCTCTCGGCATGAAGAATTGGTATCTGGAGAGTATGGTCCCAGGACTCTaGCTCTGCACTTCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: RHKNISDALGMKNWYLESMVPGL*LCTSGC
Trigger: ACAGCCAGAAGTGCAGAGTCAGAGTCCTGGGACCAT...ACTCTCCAGATACCAATTCTTCATGCCGAGAGCATCGGAAATGTTTTTGTGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR TCA 90 bp AGTAAGACACAAAAACATTTCCGATGCTCTCGGCATGAAGAATTGGTATCTGGAACAGACAGACTCCACTaGGCCTCTTCGGTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: SKTQKHFRCSRHEELVSGTDRLH*ASSVSR
Trigger: CCTGGAGACCGAAGAGGCTCAGTGGAGTCTGTCTGT...TCCAGATACCAATTCTTCATGCCGAGAGCATCGGAAATGTTTTTGTGTCTTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR TCA 90 bp GTAAAGGACGGGTATCTGAGCAGCCTGCCAATCTCGCACCCACCTTCAAGATGCGATCGTCTTCAGTCATaGAGATTTGCATTGTTTTGT +
Preference number: 4 (lower is better)
Translates to: VKDGYLSSLPISHPPSRCDRLQS*RFALFC
Trigger: ACAAAACAATGCAAATCTTCATGACTGAAGACGATC...GCATCTTGAAGGTGGGTGCGAGATTGGCAGGCTGCTCAGATACCCGTCCTTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR GCA 90 bp AGTAAGACACAAAAACATTTCCGATGCTCTCGGCATGAAGAATTGGTATCTGGACCCATCATGGGCAGCTaGGCGGCCATAAAGGAGAGA +
Preference number: 4 (lower is better)
Translates to: SKTQKHFRCSRHEELVSGPIMGS*AAIKER
Trigger: TCTCTCCTTTATGGCCGCGCAGCTGCCCATGATGGG...TCCAGATACCAATTCTTCATGCCGAGAGCATCGGAAATGTTTTTGTGTCTTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555004.3
ENST00000556728.1
CDS-3UTR GCA 90 bp AAATATACACGAGAGCTTCCTAACCAGCTTTTTAAGTTTCTCCACTACAGAGGGGGGAGGGTCCCCTTCTaGCTGCATCCCAAGAAAACC +
Preference number: 4 (lower is better)
Translates to: KYTRELPNQLFKFLHYRGGRVPF*LHPKKT
Trigger: GGTTTTCTTGGGATGCAGGCAGAAGGGGACCCTCCC...CCCTCTGTAGTGGAGAAACTTAAAAAGCTGGTTAGGAAGCTCTCGTGTATATTT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR GCA 90 bp AGAGAAGTCAGTGATCGCATGGTGAAACCAGGTGCTTGGGTAGCAAAGGACTCCGCAGGGAGTCTTATTTaGCTCTTGACCTTGATTTCA +
Preference number: 4 (lower is better)
Translates to: REVSDRMVKPGAWVAKDSAGSLI*LLTLIS
Trigger: TGAAATCAAGGTCAAGAGGCAAATAAGACTCCCTGC...GGAGTCCTTTGCTACCCAAGCACCTGGTTTCACCATGCGATCACTGACTTCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR GCA 90 bp TGGTGGAAACAGTCACATGGATTTCTAAGAGACCACATGACATGCTGGGAGTTGTTGGAAGCTCCCTTCTaGCAGCATATAGAGCCCTTG +
Preference number: 4 (lower is better)
Translates to: WWKQSHGFLRDHMTCWELLEAPF*QHIEPL
Trigger: CAAGGGCTCTATATGCTGGCAGAAGGGAGCTTCCAA...CAACTCCCAGCATGTCATGTGGTCTCTTAGAAATCCATGTGACTGTTTCCACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CCA 90 bp AGTAATCCTATTAACATGGCGGCTTCCAGGGAAGAGTGCCGCTTCTGGACAACTCTGGTCCCATGTTCCTaGAATGTAGTTTCAAGGATC +
Preference number: 4 (lower is better)
Translates to: SNPINMAASREECRFWTTLVPCS*NVVSRI
Trigger: GATCCTTGAAACTACATTCCAGGAACATGGGACCAG...AGTTGTCCAGAAGCGGCACTCTTCCCTGGAAGCCGCCATGTTAATAGGATTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CCA 90 bp AGTAAGACACAAAAACATTTCCGATGCTCTCGGCATGAAGAATTGGTATCTGGAGCCTCTTTCTACGTGTaGGTGCTTCTGCTGGGCTCC +
Preference number: 4 (lower is better)
Translates to: SKTQKHFRCSRHEELVSGASFYV*VLLLGS
Trigger: GGAGCCCAGCAGAAGCACCCACACGTAGAAAGAGGC...TCCAGATACCAATTCTTCATGCCGAGAGCATCGGAAATGTTTTTGTGTCTTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CCA 90 bp CGAAATCCTTTATTAAGAAAGAGTCTTCACTGTAGAGAAGTCAGTGATCGCATGTGCCAAATGTCTGGATaGAGCCATCCGGGCAGGCGC +
Preference number: 4 (lower is better)
Translates to: RNPLLRKSLHCREVSDRMCQMSG*SHPGRR
Trigger: GCGCCTGCCCGGATGGCTCCATCCAGACATTTGGCA...CATGCGATCACTGACTTCTCTACAGTGAAGACTCTTTCTTAATAAAGGATTTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CCA 90 bp TCCTTGCTTGCCAGGACCCCAGATGCTGATATTTCAGAATTTAAGGAAGTGGCTCTGAAAAGCTCCACCTaGCAACACTCTCAAGCCTCT +
Preference number: 4 (lower is better)
Translates to: SLLARTPDADISEFKEVALKSST*QHSQAS
Trigger: AGAGGCTTGAGAGTGTTGCCAGGTGGAGCTTTTCAG...AGCCACTTCCTTAAATTCTGAAATATCAGCATCTGGGGTCCTGGCAAGCAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR TCA 90 bp AAGCACTTTCACAGCTTCAGGAGAATGCACGGTATCCACACTGAATGTAAAGGAGTTCTTTTGCACTCGTaGCCTCCCCTTAAGCTGATG +
Preference number: 4 (lower is better)
Translates to: KHFHSFRRMHGIHTECKGVLLHS*PPLKLM
Trigger: CATCAGCTTAAGGGGAGGTCACGAGTGCAAAAGAAC...TCCTTTACATTCAGTGTGGATACCGTGCATTCTCCTGAAGCTGTGAAAGTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR TCA 90 bp CGAAATCCTTTATTAAGAAAGAGTCTTCACTGTAGAGAAGTCAGTGATCGCATGGCCCCAGCTAGAGTCTaGATGAGGACGATCCCTCTC +
Preference number: 4 (lower is better)
Translates to: RNPLLRKSLHCREVSDRMAPARV*MRTIPL
Trigger: GAGAGGGATCGTCCTCATTCAGACTCTAGCTGGGGC...CATGCGATCACTGACTTCTCTACAGTGAAGACTCTTTCTTAATAAAGGATTTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR TCA 90 bp TGGTGGAAACAGTCACATGGATTTCTAAGAGACCACATGACATGCTGGGAGTTGGTCCCCACCAAGCTGTaGGAATCAAAAATGTCTCCA +
Preference number: 4 (lower is better)
Translates to: WWKQSHGFLRDHMTCWELVPTKL*ESKMSP
Trigger: TGGAGACATTTTTGATTCTCACAGCTTGGTGGGGAC...CAACTCCCAGCATGTCATGTGGTCTCTTAGAAATCCATGTGACTGTTTCCACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR GCA 90 bp CTGACTCAGCTTGACCACAACATGGGATATTTGAAATCAGGGCTGCTGGGGAGAGCACCCAGCCTAAGTTaGTCTTTTGAATCACCTAAT +
Preference number: 4 (lower is better)
Translates to: LTQLDHNMGYLKSGLLGRAPSLS*SFESPN
Trigger: ATTAGGTGATTCAAAAGAGCAACTTAGGCTGGGTGC...TCTCCCCAGCAGCCCTGATTTCAAATATCCCATGTTGTGGTCAAGCTGAGTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR GCA 90 bp AGTAATCCTATTAACATGGCGGCTTCCAGGGAAGAGTGCCGCTTCTGGACAACTGGGATTACAGGCACATaGCACAATGTCTGGTTAATT +
Preference number: 4 (lower is better)
Translates to: SNPINMAASREECRFWTTGITGT*HNVWLI
Trigger: AATTAACCAGACATTGTGGCATGTGCCTGTAATCCC...AGTTGTCCAGAAGCGGCACTCTTCCCTGGAAGCCGCCATGTTAATAGGATTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR GCA 90 bp AAATATACACGAGAGCTTCCTAACCAGCTTTTTAAGTTTCTCCACTACAGAGGGCAATCACTGGGCATCTaGCAGGACGAAGCAAAGCGG +
Preference number: 4 (lower is better)
Translates to: KYTRELPNQLFKFLHYRGQSLGI*QDEAKR
Trigger: CCGCTTTGCTTCGTCCTGGCAGATGCCCAGTGATTG...CCCTCTGTAGTGGAGAAACTTAAAAAGCTGGTTAGGAAGCTCTCGTGTATATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR GCA 90 bp CTTCCAGGGAAGAGTGCCGCTTCTGGACAACTAAGATGTCCCTTTGCCTGTCATCCTGCAAATATGCTGTaGACATCTGTCAGGATTTAT +
Preference number: 4 (lower is better)
Translates to: LPGKSAASGQLRCPFACHPANML*TSVRIY
Trigger: ATAAATCCTGACAGATGTGCACAGCATATTTGCAGG...ATGACAGGCAAAGGGACATCTTAGTTGTCCAGAAGCGGCACTCTTCCCTGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR GCA 90 bp TGGTGGAAACAGTCACATGGATTTCTAAGAGACCACATGACATGCTGGGAGTTGGGCCTGCAAATTCCCTaGAAATATGCTGTGCACATC +
Preference number: 4 (lower is better)
Translates to: WWKQSHGFLRDHMTCWELGLQIP*KYAVHI
Trigger: GATGTGCACAGCATATTTGCAGGGAATTTGCAGGCC...CAACTCCCAGCATGTCATGTGGTCTCTTAGAAATCCATGTGACTGTTTCCACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CCA 90 bp CGAAATCCTTTATTAAGAAAGAGTCTTCACTGTAGAGAAGTCAGTGATCGCATGGCAAGACGGCGTCGTTaGAGGACCGAGGAGGATCTT +
Preference number: 4 (lower is better)
Translates to: RNPLLRKSLHCREVSDRMARRRR*RTEEDL
Trigger: AAGATCCTCCTCGGTCCTCCAACGACGCCGTCTTGC...CATGCGATCACTGACTTCTCTACAGTGAAGACTCTTTCTTAATAAAGGATTTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555004.3
ENST00000556728.1
CDS-3UTR CCA 90 bp AGACACAAAAACATTTCCGATGCTCTCGGCATGAAGAATTGGTATCTGGAGAGTAGGGAAGTGCTTAGTTaGGGCAGAGAGCTCAGTGAG +
Preference number: 4 (lower is better)
Translates to: RHKNISDALGMKNWYLESREVLS*GRELSE
Trigger: CTCACTGAGCTCTCTGCCCCAACTAAGCACTTCCCT...ACTCTCCAGATACCAATTCTTCATGCCGAGAGCATCGGAAATGTTTTTGTGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CCA 90 bp CGAAATCCTTTATTAAGAAAGAGTCTTCACTGTAGAGAAGTCAGTGATCGCATGCTCGGGGACAATCACTaGGCATCTGCCAGGACGAAG +
Preference number: 4 (lower is better)
Translates to: RNPLLRKSLHCREVSDRMLGDNH*ASARTK
Trigger: CTTCGTCCTGGCAGATGCCCAGTGATTGTCCCCGAG...CATGCGATCACTGACTTCTCTACAGTGAAGACTCTTTCTTAATAAAGGATTTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR TCA 90 bp TCCTTGCTTGCCAGGACCCCAGATGCTGATATTTCAGAATTTAAGGAAGTGGCTTCCTGGACTTACACTTaGATGTGGCAATCTGGCTAT +
Preference number: 4 (lower is better)
Translates to: SLLARTPDADISEFKEVASWTYT*MWQSGY
Trigger: ATAGCCAGATTGCCACATTCAAGTGTAAGTCCAGGA...AGCCACTTCCTTAAATTCTGAAATATCAGCATCTGGGGTCCTGGCAAGCAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR GCA 90 bp AAATATACACGAGAGCTTCCTAACCAGCTTTTTAAGTTTCTCCACTACAGAGGGCACTGTAATCTGCAATaGAGAGTGGTCGAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: KYTRELPNQLFKFLHYRGHCNLQ*RVVEAS
Trigger: GGAGGCCTCGACCACTCTGCATTGCAGATTACAGTG...CCCTCTGTAGTGGAGAAACTTAAAAAGCTGGTTAGGAAGCTCTCGTGTATATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR GCA 90 bp AAGCACTTTCACAGCTTCAGGAGAATGCACGGTATCCACACTGAATGTAAAGGATGGAAAAGCATCTGCTaGCTTTCCAGCGAAATGCTG +
Preference number: 4 (lower is better)
Translates to: KHFHSFRRMHGIHTECKGWKSIC*LSSEML
Trigger: CAGCATTTCGCTGGAAAGGCAGCAGATGCTTTTCCA...TCCTTTACATTCAGTGTGGATACCGTGCATTCTCCTGAAGCTGTGAAAGTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR GCA 90 bp GTAAGACACAAAAACATTTCCGATGCTCTCGGCATGAAGAATTGGTATCTGGAGGGCTGGAAAAGCATCTaGTGCCTTTCCAGCGAAATG +
Preference number: 4 (lower is better)
Translates to: VRHKNISDALGMKNWYLEGWKSI*CLSSEM
Trigger: CATTTCGCTGGAAAGGCAGCAGATGCTTTTCCAGCC...CTCCAGATACCAATTCTTCATGCCGAGAGCATCGGAAATGTTTTTGTGTCTTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR GCA 90 bp AAGCACTTTCACAGCTTCAGGAGAATGCACGGTATCCACACTGAATGTAAAGGAAGCATACTCTTCATATaGATTGGTGAGGGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: KHFHSFRRMHGIHTECKGSILFI*IGEGPG
Trigger: ACCTGGCCCCTCACCAATGCATATGAAGAGTATGCT...TCCTTTACATTCAGTGTGGATACCGTGCATTCTCCTGAAGCTGTGAAAGTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CCA 90 bp AAGCACTTTCACAGCTTCAGGAGAATGCACGGTATCCACACTGAATGTAAAGGAGAAGAGTGCCGCTTCTaGACAACTAAGATGTCCCTT +
Preference number: 4 (lower is better)
Translates to: KHFHSFRRMHGIHTECKGEECRF*TTKMSL
Trigger: AAGGGACATCTTAGTTGTCCAGAAGCGGCACTCTTC...TCCTTTACATTCAGTGTGGATACCGTGCATTCTCCTGAAGCTGTGAAAGTGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CCA 90 bp CGAAATCCTTTATTAAGAAAGAGTCTTCACTGTAGAGAAGTCAGTGATCGCATGATCTGCAATGCAGAGTaGTCGAGGCCTCCAATGCCC +
Preference number: 4 (lower is better)
Translates to: RNPLLRKSLHCREVSDRMICNAE*SRPPMP
Trigger: GGGCATTGGAGGCCTCGACCACTCTGCATTGCAGAT...CATGCGATCACTGACTTCTCTACAGTGAAGACTCTTTCTTAATAAAGGATTTCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CCA 90 bp CTCGCATTATTTGAACGCAGGGCAGTGACCATGATCACTGCTGCTGCTCAGAAGACAAATGGGGAAAAGTaGAAAGCATGCATAGTTTCA +
Preference number: 4 (lower is better)
Translates to: LALFERRAVTMITAAAQKTNGEK*KACIVS
Trigger: TGAAACTATGCATGCTTTCCACTTTTCCCCATTTGT...CTTCTGAGCAGCAGCAGTGATCATGGTCACTGCCCTGCGTTCAAATAATGCGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR CAA 72 bp CATGGATTTCTAAGAGACCACATGACATGCTGGGAGTaGCAGATCACTGTCCTCAGCTCGCATTATTTGAAC +
Preference number: 4 (lower is better)
Translates to: HGFLRDHMTCWE*QITVLSSHYLN
Trigger: GTTCAAATAATGCGAGCTGAGGACAGTGATCTGCAACTCCCAGCATGTCATGTGGTCTCTTAGAAATCCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR TCA 90 bp TCCTTGCTTGCCAGGACCCCAGATGCTGATATTTCAGAATTTAAGGAAGTGGCTAAAGGGAGAGAGGCTTaGAAACTGAATTTAACCGAC +
Preference number: 4 (lower is better)
Translates to: SLLARTPDADISEFKEVAKGREA*KLNLTD
Trigger: GTCGGTTAAATTCAGTTTTCAAGCCTCTCTCCCTTT...AGCCACTTCCTTAAATTCTGAAATATCAGCATCTGGGGTCCTGGCAAGCAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR GCA 90 bp TGGTGGAAACAGTCACATGGATTTCTAAGAGACCACATGACATGCTGGGAGTTGTCTGAAGAAGGAAAGTaGCATTTGTCTTGCAGGGAT +
Preference number: 4 (lower is better)
Translates to: WWKQSHGFLRDHMTCWELSEEGK*HLSCRD
Trigger: ATCCCTGCAAGACAAATGGCACTTTCCTTCTTCAGA...CAACTCCCAGCATGTCATGTGGTCTCTTAGAAATCCATGTGACTGTTTCCACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR GCA 90 bp CGAAATCCTTTATTAAGAAAGAGTCTTCACTGTAGAGAAGTCAGTGATCGCATGACTGATAAATCCCTGTaGACTGCCGCCTGCCCCTTT +
Preference number: 4 (lower is better)
Translates to: RNPLLRKSLHCREVSDRMTDKSL*TAACPF
Trigger: AAAGGGGCAGGCGGCAGTGCACAGGGATTTATCAGT...CATGCGATCACTGACTTCTCTACAGTGAAGACTCTTTCTTAATAAAGGATTTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR GCA 90 bp GTAAGACACAAAAACATTTCCGATGCTCTCGGCATGAAGAATTGGTATCTGGAGAGAGACCACATGACATaGTGGGAGTTGCAGATCACT +
Preference number: 4 (lower is better)
Translates to: VRHKNISDALGMKNWYLERDHMT*WELQIT
Trigger: AGTGATCTGCAACTCCCAGCATGTCATGTGGTCTCT...CTCCAGATACCAATTCTTCATGCCGAGAGCATCGGAAATGTTTTTGTGTCTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR GCA 90 bp AGTAAGACACAAAAACATTTCCGATGCTCTCGGCATGAAGAATTGGTATCTGGACATGGTGAAACCAGGTaGTTGGGTAGCAAAGGACTC +
Preference number: 4 (lower is better)
Translates to: SKTQKHFRCSRHEELVSGHGETR*LGSKGL
Trigger: GAGTCCTTTGCTACCCAAGCACCTGGTTTCACCATG...TCCAGATACCAATTCTTCATGCCGAGAGCATCGGAAATGTTTTTGTGTCTTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555004.3
ENST00000556728.1
CDS-3UTR CCA 90 bp AGACACAAAAACATTTCCGATGCTCTCGGCATGAAGAATTGGTATCTGGAGAGTACTAGCTGTCTCATCTaGTCCCATGTTCCTGGAATG +
Preference number: 4 (lower is better)
Translates to: RHKNISDALGMKNWYLESTSCLI*SHVPGM
Trigger: CATTCCAGGAACATGGGACCAGATGAGACAGCTAGT...ACTCTCCAGATACCAATTCTTCATGCCGAGAGCATCGGAAATGTTTTTGTGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CCA 90 bp GTAAGACACAAAAACATTTCCGATGCTCTCGGCATGAAGAATTGGTATCTGGAGCTTAAGCTGATGCACTaGCAGATGATATACGGTGGC +
Preference number: 4 (lower is better)
Translates to: VRHKNISDALGMKNWYLELKLMH*QMIYGG
Trigger: GCCACCGTATATCATCTGCCAGTGCATCAGCTTAAG...CTCCAGATACCAATTCTTCATGCCGAGAGCATCGGAAATGTTTTTGTGTCTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CCA 90 bp AGTAAGACACAAAAACATTTCCGATGCTCTCGGCATGAAGAATTGGTATCTGGAAGAACATTCAGGATCTaGCTGTTCCCTTTGGCTCCC +
Preference number: 4 (lower is better)
Translates to: SKTQKHFRCSRHEELVSGRTFRI*LFPLAP
Trigger: GGGAGCCAAAGGGAACAGCCAGATCCTGAATGTTCT...TCCAGATACCAATTCTTCATGCCGAGAGCATCGGAAATGTTTTTGTGTCTTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555004.3
3UTR CAA 72 bp CCCTTCTCTCTGGTTTTTACTTGGAAGCTTCCTTGCTaGCCAGGACCCCAGATGCTGATATTTCAGAATTTA +
Preference number: 4 (lower is better)
Translates to: PFSLVFTWKLPC*PGPQMLIFQNL
Trigger: TAAATTCTGAAATATCAGCATCTGGGGTCCTGGCAAGCAAGGAAGCTTCCAAGTAAAAACCAGAGAGAAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR GCA 90 bp ATAATAGAAAATGACAACAGCAGCAACGCTAACAAAGTGAGATTTCACAGATACAGCCTGGGGTCACCTTaGAGAACAAGATGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: IIENDNSSNANKVRFHRYSLGSP*RTRWSQ
Trigger: CTGGGACCATCTTGTTCTGCAAGGTGACCCCAGGCT...GTATCTGTGAAATCTCACTTTGTTAGCGTTGCTGCTGTTGTCATTTTCTATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR GCA 90 bp CGAAATCCTTTATTAAGAAAGAGTCTTCACTGTAGAGAAGTCAGTGATCGCATGAAGTGCCATTTGTCTTaGAGGGATCAGGCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: RNPLLRKSLHCREVSDRMKCHLS*RDQAAV
Trigger: CACTGCTGCCTGATCCCTGCAAGACAAATGGCACTT...CATGCGATCACTGACTTCTCTACAGTGAAGACTCTTTCTTAATAAAGGATTTCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CCA 90 bp CGAAATCCTTTATTAAGAAAGAGTCTTCACTGTAGAGAAGTCAGTGATCGCATGGTGAAACCAGGTGCTTaGGTAGCAAAGGACTCCAAG +
Preference number: 4 (lower is better)
Translates to: RNPLLRKSLHCREVSDRMVKPGA*VAKDSK
Trigger: CTTGGAGTCCTTTGCTACCCAAGCACCTGGTTTCAC...CATGCGATCACTGACTTCTCTACAGTGAAGACTCTTTCTTAATAAAGGATTTCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555004.3
ENST00000556728.1
CDS-3UTR TCA 90 bp AAATATACACGAGAGCTTCCTAACCAGCTTTTTAAGTTTCTCCACTACAGAGGGACAAAACTTAAGCAGTaGGGACCGGCATCTTTTTCC +
Preference number: 4 (lower is better)
Translates to: KYTRELPNQLFKFLHYRGTKLKQ*GPASFS
Trigger: GGAAAAAGATGCCGGTCCTCACTGCTTAAGTTTTGT...CCCTCTGTAGTGGAGAAACTTAAAAAGCTGGTTAGGAAGCTCTCGTGTATATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR TCA 90 bp CGAAATCCTTTATTAAGAAAGAGTCTTCACTGTAGAGAAGTCAGTGATCGCATGCCCCCAGGGGCAATTTaGGAAGTAAATGAGACACAA +
Preference number: 4 (lower is better)
Translates to: RNPLLRKSLHCREVSDRMPPGAI*EVNETQ
Trigger: TTGTGTCTCATTTACTTCTCAAATTGCCCCTGGGGG...CATGCGATCACTGACTTCTCTACAGTGAAGACTCTTTCTTAATAAAGGATTTCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR GCA 90 bp CGAAATCCTTTATTAAGAAAGAGTCTTCACTGTAGAGAAGTCAGTGATCGCATGGAGAAGATGCAGATTTaGTCAAAGGCTGCTACCCAG +
Preference number: 4 (lower is better)
Translates to: RNPLLRKSLHCREVSDRMEKMQI*SKAATQ
Trigger: CTGGGTAGCAGCCTTTGAGCAAATCTGCATCTTCTC...CATGCGATCACTGACTTCTCTACAGTGAAGACTCTTTCTTAATAAAGGATTTCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CCA 90 bp AAATATACACGAGAGCTTCCTAACCAGCTTTTTAAGTTTCTCCACTACAGAGGGGTAATCCTATTAACATaGCGGCTTCCAGGGAAGAGT +
Preference number: 4 (lower is better)
Translates to: KYTRELPNQLFKFLHYRGVILLT*RLPGKS
Trigger: ACTCTTCCCTGGAAGCCGCCATGTTAATAGGATTAC...CCCTCTGTAGTGGAGAAACTTAAAAAGCTGGTTAGGAAGCTCTCGTGTATATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR TCA 90 bp ATAATAGAAAATGACAACAGCAGCAACGCTAACAAAGTGAGATTTCACAGATACCCGATGCTCTCGGCATaGAGAATTGGTATCTGGAGA +
Preference number: 4 (lower is better)
Translates to: IIENDNSSNANKVRFHRYPMLSA*RIGIWR
Trigger: TCTCCAGATACCAATTCTTCATGCCGAGAGCATCGG...GTATCTGTGAAATCTCACTTTGTTAGCGTTGCTGCTGTTGTCATTTTCTATTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555004.3
ENST00000556728.1
CDS-3UTR GCA 90 bp GTAAGACACAAAAACATTTCCGATGCTCTCGGCATGAAGAATTGGTATCTGGAGCAAAAACATTTCCGATaGTCTCGGCATGAAGAATTG +
Preference number: 4 (lower is better)
Translates to: VRHKNISDALGMKNWYLEQKHFR*SRHEEL
Trigger: CAATTCTTCATGCCGAGAGCATCGGAAATGTTTTTG...CTCCAGATACCAATTCTTCATGCCGAGAGCATCGGAAATGTTTTTGTGTCTTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000555004.3
ENST00000556728.1
CDS-3UTR GCA 90 bp ATAATAGAAAATGACAACAGCAGCAACGCTAACAAAGTGAGATTTCACAGATACCATGGTGAAACCAGGTaGTTGGGTAGCAAAGGACTC +
Preference number: 4 (lower is better)
Translates to: IIENDNSSNANKVRFHRYHGETR*LGSKGL
Trigger: GAGTCCTTTGCTACCCAAGCACCTGGTTTCACCATG...GTATCTGTGAAATCTCACTTTGTTAGCGTTGCTGCTGTTGTCATTTTCTATTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555004.3
ENST00000556728.1
CDS-3UTR CCA 90 bp AAATATACACGAGAGCTTCCTAACCAGCTTTTTAAGTTTCTCCACTACAGAGGGAAGTCTAGTGGCACCTaGACACAAAACTTAAGCAGT +
Preference number: 4 (lower is better)
Translates to: KYTRELPNQLFKFLHYRGKSSGT*TQNLSS
Trigger: ACTGCTTAAGTTTTGTGTCCAGGTGCCACTAGACTT...CCCTCTGTAGTGGAGAAACTTAAAAAGCTGGTTAGGAAGCTCTCGTGTATATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR GCA 90 bp AGACACAAAAACATTTCCGATGCTCTCGGCATGAAGAATTGGTATCTGGAGAGTGAAGAAAGAAAAGTGTaGCCTTCTCTCTGGTTTTTA +
Preference number: 4 (lower is better)
Translates to: RHKNISDALGMKNWYLESEERKV*PSLWFL
Trigger: TAAAAACCAGAGAGAAGGGCACACTTTTCTTTCTTC...ACTCTCCAGATACCAATTCTTCATGCCGAGAGCATCGGAAATGTTTTTGTGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR TCA 90 bp AGTAAGACACAAAAACATTTCCGATGCTCTCGGCATGAAGAATTGGTATCTGGAGCAACGCTAACAAAGTaGGATTTCACAGATACATTT +
Preference number: 4 (lower is better)
Translates to: SKTQKHFRCSRHEELVSGATLTK*DFTDTF
Trigger: AAATGTATCTGTGAAATCTCACTTTGTTAGCGTTGC...TCCAGATACCAATTCTTCATGCCGAGAGCATCGGAAATGTTTTTGTGTCTTACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555004.3
ENST00000556728.1
3UTR CAA 72 bp TCATACACTTTTATTTCAGAATTTATGGCGTCCATTTaGTGTACTTTTTGGCTCTTCCATTCTGCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: SYTFISEFMASI*CTFWLFHSASG
Trigger: GCCAGAAGCAGAATGGAAGAGCCAAAAAGTACACAAAATGGACGCCATAAATTCTGAAATAAAAGTGTATGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS TCA 90 bp CTGCCGCTGCGGGTCAGCCGCCTGCACAGTTGGCGGGGATCGGGCTaGGCAGCGAGCGTCCGGAGACCGCACGGCGCACTCGGCTGTCTC +
Preference number: 5 (lower is better)
Translates to: LPLRVSRLHSWRGSG*AASVRRPHGALGCL
Trigger: GAGACAGCCGAGTGCGCCGTGCGGTCTCCGGACGCTCGCTGCTCAGCCCGATCCCCGCCAACTGTGCAGGCGGCTGACCCGCAGCGGCAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553764.1
ENST00000555004.3
CDS GCA 90 bp AGGAGAGATCCATGGTGTCGCTGCAGCCAGCGCTCGAGTCCTCGCTaGTGCCGCTGCCGCTGCGGGTCAGCCGCCTGCACAGTTGGCGGG +
Preference number: 5 (lower is better)
Translates to: RRDPWCRCSQRSSPR*CRCRCGSAACTVGG
Trigger: CCCGCCAACTGTGCAGGCGGCTGACCCGCAGCGGCAGCGGCAGCAGCGAGGACTCGAGCGCTGGCTGCAGCGACACCATGGATCTCTCCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000553764.1
ENST00000553782.1
ENST00000555004.3
ENST00000556728.1
CDS GCA 90 bp AGAGATCCATGGTGTCGCTGCAGCCAGCGCTCGAGTCCTCGCTGCTaGCGCTGCCGCTGCGGGTCAGCCGCCTGCACAGTTGGCGGGGAT +
Preference number: 5 (lower is better)
Translates to: RDPWCRCSQRSSPRC*RCRCGSAACTVGGD
Trigger: ATCCCCGCCAACTGTGCAGGCGGCTGACCCGCAGCGGCAGCGGCAGCAGCGAGGACTCGAGCGCTGGCTGCAGCGACACCATGGATCTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000553764.1
ENST00000553782.1
ENST00000555004.3
ENST00000556728.1
CDS-3UTR CAA 90 bp AGCCAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGTGGCAGCCGCCTGCACAGTaGGCGGGGATCGGGCTGAGC +
Preference number: 5 (lower is better)
Translates to: SQRPTASQSYVPSLTPWWQPPAQ*AGIGLS
Trigger: GCTCAGCCCGATCCCCGCCAACTGTGCAGGCGGCTG...CCACCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000553764.1
ENST00000553782.1
ENST00000555004.3
CDS-3UTR CAA 90 bp GCCAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGTGGTCAGCCGCCTGCACAGTaGGCGGGGATCGGGCTGAGC +
Preference number: 5 (lower is better)
Translates to: AKGRQQVRATCQASPHGGQPPAQ*AGIGLS
Trigger: GCTCAGCCCGATCCCCGCCAACTGTGCAGGCGGCTG...ACCACCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000553764.1
ENST00000553782.1
ENST00000555004.3
CDS-3UTR CAA 90 bp CCAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGTGGTGGGCTGGCCCTGGCCATaGGCAGCCGCGTGGACATTG +
Preference number: 5 (lower is better)
Translates to: PKADSKSELRAKPHPMVVGWPWP*AAAWTL
Trigger: CAATGTCCACGCGGCTGCCAATGGCCAGGGCCAGCC...CACCACCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553764.1
ENST00000553782.1
ENST00000555004.3
CDS-3UTR CAA 90 bp AGAAGCCAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGGGCTGGCCCTGGCCATaGGCAGCCGCGTGGACATTG +
Preference number: 5 (lower is better)
Translates to: RSQRPTASQSYVPSLTPWGWPWP*AAAWTL
Trigger: CAATGTCCACGCGGCTGCCAATGGCCAGGGCCAGCC...CCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTGGCTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553782.1
ENST00000555004.3
CDS-3UTR CAA 90 bp CAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGTGGTGCGGGGACACAGGGGTGTaGCTCAGCCACGTGGATGGG +
Preference number: 5 (lower is better)
Translates to: QRPTASQSYVPSLTPWWCGDTGV*LSHVDG
Trigger: CCCATCCACGTGGCTGAGCAACACCCCTGTGTCCCC...GCACCACCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS CCA 90 bp AAGACGGCGTCGTTGGAGGACCGAGGAGGATCTTCCGGCTGGCCCTaGCCATTGGCAGCCGCGTGGACATTGGCAGAGGAGTTAAACAGG +
Preference number: 5 (lower is better)
Translates to: KTASLEDRGGSSGWP*PLAAAWTLAEELNR
Trigger: CCTGTTTAACTCCTCTGCCAATGTCCACGCGGCTGCCAATGGCCAGGGCCAGCCGGAAGATCCTCCTCGGTCCTCCAACGACGCCGTCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000553764.1
ENST00000553782.1
ENST00000555004.3
ENST00000556728.1
CDS CCA 90 bp CATAGCAAGACGGCGTCGTTGGAGGACCGAGGAGGATCTTCCGGCTaGCCCTGGCCATTGGCAGCCGCGTGGACATTGGCAGAGGAGTTA +
Preference number: 5 (lower is better)
Translates to: HSKTASLEDRGGSSG*PWPLAAAWTLAEEL
Trigger: TAACTCCTCTGCCAATGTCCACGCGGCTGCCAATGGCCAGGGCCAGCCGGAAGATCCTCCTCGGTCCTCCAACGACGCCGTCTTGCTATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000553764.1
ENST00000553782.1
ENST00000555004.3
ENST00000556728.1
CDS-3UTR CAA 90 bp ACTTCTGGCTGTAGTGAGCCTCTTTCTACGTGTGGGTGCTTCTGCTGGGCTCCTCAGCCGCCTGCACAGTaGGCGGGGATCGGGCTGAGC +
Preference number: 5 (lower is better)
Translates to: TSGCSEPLSTCGCFCWAPQPPAQ*AGIGLS
Trigger: GCTCAGCCCGATCCCCGCCAACTGTGCAGGCGGCTG...AGGAGCCCAGCAGAAGCACCCACACGTAGAAAGAGGCTCACTACAGCCAGAAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CAA 90 bp GCCAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGTGGTTGCCCTCTGAAGGCCTaGCCCCGTCATGCCTCTAGG +
Preference number: 5 (lower is better)
Translates to: AKGRQQVRATCQASPHGGCPLKA*PRHASR
Trigger: CCTAGAGGCATGACGGGGCAAGGCCTTCAGAGGGCA...ACCACCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CAA 90 bp AGCCAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGTGGAGCAAGACGGCGTCGTaGGAGGACCGAGGAGGATCT +
Preference number: 5 (lower is better)
Translates to: SQRPTASQSYVPSLTPWWSKTAS*EDRGGS
Trigger: AGATCCTCCTCGGTCCTCCAACGACGCCGTCTTGCT...CCACCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553764.1
ENST00000553782.1
ENST00000555004.3
CDS-3UTR CAA 90 bp AGCCCAACCCTGGCACTTGCTCGGGGACAATCACTGGGCATCTGCCAGGACGAAAGCAAGACGGCGTCGTaGGAGGACCGAGGAGGATCT +
Preference number: 5 (lower is better)
Translates to: SPTLALARGQSLGICQDESKTAS*EDRGGS
Trigger: AGATCCTCCTCGGTCCTCCAACGACGCCGTCTTGCT...TTCGTCCTGGCAGATGCCCAGTGATTGTCCCCGAGCAAGTGCCAGGGTTGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CAA 90 bp GCCAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGTGGTTCCCGGGCAAGCCCTTaGCTTCCCACTGAACGCACA +
Preference number: 5 (lower is better)
Translates to: AKGRQQVRATCQASPHGGSRASP*LPTERT
Trigger: TGTGCGTTCAGTGGGAAGCAAAGGGCTTGCCCGGGA...ACCACCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CAA 90 bp CAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGTGGTGCGCAGCCGCGTGGACATaGGCAGAGGAGTTAAACAGG +
Preference number: 5 (lower is better)
Translates to: QRPTASQSYVPSLTPWWCAAAWT*AEELNR
Trigger: CCTGTTTAACTCCTCTGCCAATGTCCACGCGGCTGC...GCACCACCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553764.1
ENST00000553782.1
ENST00000555004.3
CDS-3UTR CAA 90 bp CCAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGTGGTGGCAGCCGCGTGGACATaGGCAGAGGAGTTAAACAGG +
Preference number: 5 (lower is better)
Translates to: PKADSKSELRAKPHPMVVAAAWT*AEELNR
Trigger: CCTGTTTAACTCCTCTGCCAATGTCCACGCGGCTGC...CACCACCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553764.1
ENST00000553782.1
ENST00000555004.3
CDS-3UTR CAA 90 bp AGAAGCCAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGAGCAAGACGGCGTCGTaGGAGGACCGAGGAGGATCT +
Preference number: 5 (lower is better)
Translates to: RSQRPTASQSYVPSLTPWSKTAS*EDRGGS
Trigger: AGATCCTCCTCGGTCCTCCAACGACGCCGTCTTGCT...CCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTGGCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553782.1
ENST00000555004.3
CDS-3UTR CAA 90 bp GAGGTTCTGGAACTGATAAATCCCTGTGCACTGCCGCCTGCCCCTTTCCTGGACGCCCAACCCTGGCACTaGCTCGGGGACAATCACTGG +
Preference number: 5 (lower is better)
Translates to: EVLELINPCALPPAPFLDAQPWH*LGDNHW
Trigger: CCAGTGATTGTCCCCGAGCAAGTGCCAGGGTTGGGC...GTCCAGGAAAGGGGCAGGCGGCAGTGCACAGGGATTTATCAGTTCCAGAACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CAA 90 bp AGCCAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGTGGATTCCCCAGGCTCACTaGACCTGCGCGGCCATAAAG +
Preference number: 5 (lower is better)
Translates to: SQRPTASQSYVPSLTPWWIPQAH*TCAAIK
Trigger: CTTTATGGCCGCGCAGGTCAAGTGAGCCTGGGGAAT...CCACCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553764.1
CDS-3UTR CAA 90 bp CAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGTGGTGCGTGCTGAAGTCCTCGTaGGGCGAGTCCATGAAAGCT +
Preference number: 5 (lower is better)
Translates to: QRPTASQSYVPSLTPWWCVLKSS*GESMKA
Trigger: AGCTTTCATGGACTCGCCCAACGAGGACTTCAGCAC...GCACCACCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553764.1
ENST00000553782.1
ENST00000555004.3
CDS-3UTR CAA 90 bp AAGCCAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGTGGGTCTCCCAATGCACTaGGGTCTTGGAAGGGACCAG +
Preference number: 5 (lower is better)
Translates to: KPKADSKSELRAKPHPMVGLPMH*GLGRDQ
Trigger: CTGGTCCCTTCCAAGACCCAAGTGCATTGGGAGACC...CACCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CAA 90 bp GGGCCTTGTGTAAATGTGCCCTGGAGGTGCCACCCAGTCACAGAAGGCAGTACAGCAGTGGGCGGGAGGTaGAGCATGTTCCACTCTGAG +
Preference number: 5 (lower is better)
Translates to: GPCVNVPWRCHPVTEGSTAVGGR*SMFHSE
Trigger: CTCAGAGTGGAACATGCTCAACCTCCCGCCCACTGC...TGTACTGCCTTCTGTGACTGGGTGGCACCTCCAGGGCACATTTACACAAGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CAA 90 bp AGTAATCCTATTAACATGGCGGCTTCCAGGGAAGAGTGCCGCTTCTGGACAACTGGCTGGCCCTGGCCATaGGCAGCCGCGTGGACATTG +
Preference number: 5 (lower is better)
Translates to: SNPINMAASREECRFWTTGWPWP*AAAWTL
Trigger: CAATGTCCACGCGGCTGCCAATGGCCAGGGCCAGCC...AGTTGTCCAGAAGCGGCACTCTTCCCTGGAAGCCGCCATGTTAATAGGATTACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CAA 90 bp AGCCAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGTGGTACTTGGAAGCTTCCTaGCTTGCCAGGACCCCAGAT +
Preference number: 5 (lower is better)
Translates to: SQRPTASQSYVPSLTPWWYLEAS*LARTPD
Trigger: ATCTGGGGTCCTGGCAAGCAAGGAAGCTTCCAAGTA...CCACCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CAA 90 bp ACTTCTGGCTGTAGTGAGCCTCTTTCTACGTGTGGGTGCTTCTGCTGGGCTCCTATCTCCATGGGCCATTaGGAGGCCAGGGAGCTGCCT +
Preference number: 5 (lower is better)
Translates to: TSGCSEPLSTCGCFCWAPISMGH*EARELP
Trigger: AGGCAGCTCCCTGGCCTCCAAATGGCCCATGGAGAT...AGGAGCCCAGCAGAAGCACCCACACGTAGAAAGAGGCTCACTACAGCCAGAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CAA 90 bp GAAGGACAGCATTGGCTTGGAGTAGGAAGAGCTGCGCCATCATCCTGCCTGGGTGGTCCCTTTTCCTGCTaGGAAGCTGTGGGCTCTGTC +
Preference number: 5 (lower is better)
Translates to: EGQHWLGVGRAAPSSCLGGPFSC*EAVGSV
Trigger: GACAGAGCCCACAGCTTCCAAGCAGGAAAAGGGACC...ACCCAGGCAGGATGATGGCGCAGCTCTTCCTACTCCAAGCCAATGCTGTCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CAA 90 bp GAAGCCAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGTAAATGTCTCCAGACATaGCTGATGGCCCCCAGCCCT +
Preference number: 5 (lower is better)
Translates to: EAKGRQQVRATCQASPHGKCLQT*LMAPSP
Trigger: AGGGCTGGGGGCCATCAGCAATGTCTGGAGACATTT...ACCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTGGCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CAA 90 bp AGCCAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGTGGTACTCTTCATATGCATaGGTGAGGGGCCAGGTCCCT +
Preference number: 5 (lower is better)
Translates to: SQRPTASQSYVPSLTPWWYSSYA*VRGQVP
Trigger: AGGGACCTGGCCCCTCACCAATGCATATGAAGAGTA...CCACCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CAA 90 bp AAGCCAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGTGGGAGAAATCCGGGATTaGTCTTTGTTCTGCGCGGCC +
Preference number: 5 (lower is better)
Translates to: KPKADSKSELRAKPHPMVGEIRD*SLFCAA
Trigger: GGCCGCGCAGAACAAAGACAAATCCCGGATTTCTCC...CACCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553782.1
CDS-3UTR CAA 90 bp GAGGTTCTGGAACTGATAAATCCCTGTGCACTGCCGCCTGCCCCTTTCCTGGACCAATGCACTTGGGTCTaGGAAGGGACCAGGTGTCTG +
Preference number: 5 (lower is better)
Translates to: EVLELINPCALPPAPFLDQCTWV*EGTRCL
Trigger: CAGACACCTGGTCCCTTCCAAGACCCAAGTGCATTG...GTCCAGGAAAGGGGCAGGCGGCAGTGCACAGGGATTTATCAGTTCCAGAACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CAA 90 bp CTAAGAGACCACATGACATGCTGGGAGTTGCAGATCACTGTCCTCAGCTCGCATTTGGCCAGGCTGGTCTaGAACTCCTGTCCCTGCCCG +
Preference number: 5 (lower is better)
Translates to: LRDHMTCWELQITVLSSHLARLV*NSCPCP
Trigger: CGGGCAGGGACAGGAGTTCAAGACCAGCCTGGCCAA...ATGCGAGCTGAGGACAGTGATCTGCAACTCCCAGCATGTCATGTGGTCTCTTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CAA 90 bp GCCAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGTGGTATCCGGGATTTGTCTTaGTTCTGCGCGGCCATAAAG +
Preference number: 5 (lower is better)
Translates to: AKGRQQVRATCQASPHGGIRDLS*FCAAIK
Trigger: CTTTATGGCCGCGCAGAACAAAGACAAATCCCGGAT...ACCACCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553782.1
CDS-3UTR CAA 90 bp GCCAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGTGGTCTCTCTGGTTTTTACTaGGAAGCTTCCTTGCTTGCC +
Preference number: 5 (lower is better)
Translates to: AKGRQQVRATCQASPHGGLSGFY*EASLLA
Trigger: GGCAAGCAAGGAAGCTTCCAAGTAAAAACCAGAGAG...ACCACCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CAA 90 bp GAAGCCAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGTGTCCCTTCTCCCTCATaGTCAAGGGTCAGGTTCTTT +
Preference number: 5 (lower is better)
Translates to: EAKGRQQVRATCQASPHGVPSPS*SRVRFF
Trigger: AAAGAACCTGACCCTTGACAATGAGGGAGAAGGGAC...ACCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTGGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CAA 90 bp GGGCCTTGTGTAAATGTGCCCTGGAGGTGCCACCCAGTCACAGAAGGCAGTACAACCATGACGGGCATCTaGAGAAACAGCCTCTGCAGA +
Preference number: 5 (lower is better)
Translates to: GPCVNVPWRCHPVTEGSTTMTGI*RNSLCR
Trigger: TCTGCAGAGGCTGTTTCTCAAGATGCCCGTCATGGT...TGTACTGCCTTCTGTGACTGGGTGGCACCTCCAGGGCACATTTACACAAGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CAA 90 bp CAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGTGGTGCATTTGGCATCCTCACTaGTTATTCCCCAGGCTCACT +
Preference number: 5 (lower is better)
Translates to: QRPTASQSYVPSLTPWWCIWHPH*LFPRLT
Trigger: AGTGAGCCTGGGGAATAACAAGTGAGGATGCCAAAT...GCACCACCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553764.1
CDS-3UTR CAA 90 bp AGCCAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGTGGGCCTTCCAAGGAGACTaGAGTTCAGTCTTAAAGAAG +
Preference number: 5 (lower is better)
Translates to: SQRPTASQSYVPSLTPWWAFQGD*SSVLKK
Trigger: CTTCTTTAAGACTGAACTCAAGTCTCCTTGGAAGGC...CCACCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CAA 90 bp CCAGTGATTCCAGGAATTCCAGACAGGTGGTCCATGTCCCTTCTCCCTCATTGTGAGCCTGGGGTCACCTaGCAGAACAAGATGGTCCCA +
Preference number: 5 (lower is better)
Translates to: PVIPGIPDRWSMSLLPHCEPGVT*QNKMVP
Trigger: TGGGACCATCTTGTTCTGCAAGGTGACCCCAGGCTC...ACAATGAGGGAGAAGGGACATGGACCACCTGTCTGGAATTCCTGGAATCACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CAA 90 bp GCCAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGTGGTTTCCTGGACTTACACTaGAATGTGGCAATCTGGCTA +
Preference number: 5 (lower is better)
Translates to: AKGRQQVRATCQASPHGGFLDLH*NVAIWL
Trigger: TAGCCAGATTGCCACATTCAAGTGTAAGTCCAGGAA...ACCACCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CAA 90 bp AGACACAAAAACATTTCCGATGCTCTCGGCATGAAGAATTGGTATCTGGAGAGTGGCTGGCCCTGGCCATaGGCAGCCGCGTGGACATTG +
Preference number: 5 (lower is better)
Translates to: RHKNISDALGMKNWYLESGWPWP*AAAWTL
Trigger: CAATGTCCACGCGGCTGCCAATGGCCAGGGCCAGCC...ACTCTCCAGATACCAATTCTTCATGCCGAGAGCATCGGAAATGTTTTTGTGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555004.3
ENST00000556728.1
CDS-3UTR CAA 90 bp AAGCCAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGTGCCAGAAATCCAGCCTTaGCTCCTTAATCAGACACTA +
Preference number: 5 (lower is better)
Translates to: KPKADSKSELRAKPHPMVPEIQP*LLNQTL
Trigger: TAGTGTCTGATTAAGGAGCAAAGGCTGGATTTCTGG...CACCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CAA 90 bp CTCGCATTATTTGAACGCAGGGCAGTGACCATGATCACTGCTGCTGCTCAGAAGAGGGGAAGGACAGCATaGGCTTGGAGTAGGAAGAGC +
Preference number: 5 (lower is better)
Translates to: LALFERRAVTMITAAAQKRGRTA*AWSRKS
Trigger: GCTCTTCCTACTCCAAGCCAATGCTGTCCTTCCCCT...CTTCTGAGCAGCAGCAGTGATCATGGTCACTGCCCTGCGTTCAAATAATGCGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CAA 90 bp CAAAGGCCGACAGCAAGTCAGAGCTACGTGCCAAGCCTCACCCCATGGTGGTGCTGGTCCATGCATGATTaGGCATCCTCACTTGTTATT +
Preference number: 5 (lower is better)
Translates to: QRPTASQSYVPSLTPWWCWSMHD*ASSLVI
Trigger: AATAACAAGTGAGGATGCCAAATCATGCATGGACCA...GCACCACCATGGGGTGAGGCTTGGCACGTAGCTCTGACTTGCTGTCGGCCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553764.1
CDS TCA 90 bp CAAGTGGCAACGGCAGACTGGAAAGGAGTTAGGCTGGTCCATGCATaGTTTGGCATCCTCACTTGTTATTCCCCAGGCTCACTTGACCTG +
Preference number: 5 (lower is better)
Translates to: QVATADWKGVRLVHA*FGILTCYSPGSLDL
Trigger: CAGGTCAAGTGAGCCTGGGGAATAACAAGTGAGGATGCCAAATCATGCATGGACCAGCCTAACTCCTTTCCAGTCTGCCGTTGCCACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553764.1
CDS-3UTR CAA 90 bp AGAGAAGTCAGTGATCGCATGGTGAAACCAGGTGCTTGGGTAGCAAAGGACTCCTCTGGGCTTCTCGCCTaGGGTTTTCTCATGGAGACA +
Preference number: 5 (lower is better)
Translates to: REVSDRMVKPGAWVAKDSSGLLA*GFLMET
Trigger: TGTCTCCATGAGAAAACCCAAGGCGAGAAGCCCAGA...GGAGTCCTTTGCTACCCAAGCACCTGGTTTCACCATGCGATCACTGACTTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CAA 90 bp GGATTTATTTCCAAGGCAGAATGGGGCTCAAACCTCCTCTTGGGGAGGCAGGAAGAAGGAAAGTGCCATTaGTCTTGCAGGGATCAGGCA +
Preference number: 5 (lower is better)
Translates to: GFISKAEWGSNLLLGRQEEGKCH*SCRDQA
Trigger: TGCCTGATCCCTGCAAGACAAATGGCACTTTCCTTC...TTCCTGCCTCCCCAAGAGGAGGTTTGAGCCCCATTCTGCCTTGGAAATAAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CAA 90 bp TGGTGGAAACAGTCACATGGATTTCTAAGAGACCACATGACATGCTGGGAGTTGGGCTCAAACCTCCTCTaGGGGAGGCAGGAAATCAGC +
Preference number: 5 (lower is better)
Translates to: WWKQSHGFLRDHMTCWELGSNLL*GRQEIS
Trigger: GCTGATTTCCTGCCTCCCCAAGAGGAGGTTTGAGCC...CAACTCCCAGCATGTCATGTGGTCTCTTAGAAATCCATGTGACTGTTTCCACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CAA 90 bp ATAATAGAAAATGACAACAGCAGCAACGCTAACAAAGTGAGATTTCACAGATACCAGCCGCCTGCACAGTaGGCGGGGATCGGGCTGAGC +
Preference number: 5 (lower is better)
Translates to: IIENDNSSNANKVRFHRYQPPAQ*AGIGLS
Trigger: GCTCAGCCCGATCCCCGCCAACTGTGCAGGCGGCTG...GTATCTGTGAAATCTCACTTTGTTAGCGTTGCTGCTGTTGTCATTTTCTATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555004.3
ENST00000556728.1
CDS-3UTR CAA 90 bp GTAAAGGACGGGTATCTGAGCAGCCTGCCAATCTCGCACCCACCTTCAAGATGCGGCACTATTGGCATTTaGGGGCTGGATAATTCTTAT +
Preference number: 5 (lower is better)
Translates to: VKDGYLSSLPISHPPSRCGTIGI*GLDNSY
Trigger: ATAAGAATTATCCAGCCCCAAAATGCCAATAGTGCC...GCATCTTGAAGGTGGGTGCGAGATTGGCAGGCTGCTCAGATACCCGTCCTTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CAA 90 bp GTAAGACACAAAAACATTTCCGATGCTCTCGGCATGAAGAATTGGTATCTGGAGGCAGCCGCGTGGACATaGGCAGAGGAGTTAAACAGG +
Preference number: 5 (lower is better)
Translates to: VRHKNISDALGMKNWYLEAAAWT*AEELNR
Trigger: CCTGTTTAACTCCTCTGCCAATGTCCACGCGGCTGC...CTCCAGATACCAATTCTTCATGCCGAGAGCATCGGAAATGTTTTTGTGTCTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555004.3
ENST00000556728.1
CDS-3UTR CAA 90 bp ATTGGTATCTGGAGAGTAGCAAGTTATAATAGTAAGGTTTCCCATGGTGGTGCAAGCAAGACGGCGTCGTaGGAGGACCGAGGAGGATCT +
Preference number: 5 (lower is better)
Translates to: IGIWRVASYNSKVSHGGASKTAS*EDRGGS
Trigger: AGATCCTCCTCGGTCCTCCAACGACGCCGTCTTGCT...TGCACCACCATGGGAAACCTTACTATTATAACTTGCTACTCTCCAGATACCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556728.1
CDS-3UTR CAA 90 bp AGACACAAAAACATTTCCGATGCTCTCGGCATGAAGAATTGGTATCTGGAGAGTGGGCAGACCTGGGGTTaGATGGAGAGAGACTTGCTG +
Preference number: 5 (lower is better)
Translates to: RHKNISDALGMKNWYLESGQTWG*MERDLL
Trigger: CAGCAAGTCTCTCTCCATCAAACCCCAGGTCTGCCC...ACTCTCCAGATACCAATTCTTCATGCCGAGAGCATCGGAAATGTTTTTGTGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CAA 90 bp AAGCACTTTCACAGCTTCAGGAGAATGCACGGTATCCACACTGAATGTAAAGGATGCAGATTCAGGGCCTaGTGTAAATGTGCCCTGGAG +
Preference number: 5 (lower is better)
Translates to: KHFHSFRRMHGIHTECKGCRFRA*CKCALE
Trigger: CTCCAGGGCACATTTACACAAGGCCCTGAATCTGCA...TCCTTTACATTCAGTGTGGATACCGTGCATTCTCCTGAAGCTGTGAAAGTGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CAA 90 bp AAGCACTTTCACAGCTTCAGGAGAATGCACGGTATCCACACTGAATGTAAAGGAGAGCAGATGACAGCCTaGCCAAATGTCTGGATGGAG +
Preference number: 5 (lower is better)
Translates to: KHFHSFRRMHGIHTECKGEQMTA*PNVWME
Trigger: CTCCATCCAGACATTTGGCAAGGCTGTCATCTGCTC...TCCTTTACATTCAGTGTGGATACCGTGCATTCTCCTGAAGCTGTGAAAGTGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CAA 90 bp ATAATAGAAAATGACAACAGCAGCAACGCTAACAAAGTGAGATTTCACAGATACGCCCCCAGCCCTTCCTaGAGAACGACTGGCCTCATG +
Preference number: 5 (lower is better)
Translates to: IIENDNSSNANKVRFHRYAPSPS*RTTGLM
Trigger: CATGAGGCCAGTCGTTCTCAAGGAAGGGCTGGGGGC...GTATCTGTGAAATCTCACTTTGTTAGCGTTGCTGCTGTTGTCATTTTCTATTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CAA 90 bp TCCTTGCTTGCCAGGACCCCAGATGCTGATATTTCAGAATTTAAGGAAGTGGCTAGAGAAGATGCAGATTaGCTCAAAGGCTGCTACCCA +
Preference number: 5 (lower is better)
Translates to: SLLARTPDADISEFKEVAREDAD*LKGCYP
Trigger: TGGGTAGCAGCCTTTGAGCAAATCTGCATCTTCTCT...AGCCACTTCCTTAAATTCTGAAATATCAGCATCTGGGGTCCTGGCAAGCAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CAA 90 bp GTAAGACACAAAAACATTTCCGATGCTCTCGGCATGAAGAATTGGTATCTGGAGGGTGAAACCAGGTGCTaGGGTAGCAAAGGACTCCAA +
Preference number: 5 (lower is better)
Translates to: VRHKNISDALGMKNWYLEGETRC*GSKGLQ
Trigger: TTGGAGTCCTTTGCTACCCAAGCACCTGGTTTCACC...CTCCAGATACCAATTCTTCATGCCGAGAGCATCGGAAATGTTTTTGTGTCTTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555004.3
ENST00000556728.1
CDS-3UTR CAA 90 bp GTAAGACACAAAAACATTTCCGATGCTCTCGGCATGAAGAATTGGTATCTGGAGCGCTCCAGGGAGTCTTaGATCGTCTTCAGTCATGAA +
Preference number: 5 (lower is better)
Translates to: VRHKNISDALGMKNWYLERSRES*IVFSHE
Trigger: TTCATGACTGAAGACGATCAAAGACTCCCTGGAGCG...CTCCAGATACCAATTCTTCATGCCGAGAGCATCGGAAATGTTTTTGTGTCTTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CAA 90 bp CTGACTCAGCTTGACCACAACATGGGATATTTGAAATCAGGGCTGCTGGGGAGACATTTTGTGTACTTTTaGGCTCTTCCATTCTGCTTC +
Preference number: 5 (lower is better)
Translates to: LTQLDHNMGYLKSGLLGRHFVYF*ALPFCF
Trigger: GAAGCAGAATGGAAGAGCCAAAAAGTACACAAAATG...TCTCCCCAGCAGCCCTGATTTCAAATATCCCATGTTGTGGTCAAGCTGAGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CAA 90 bp AAGCACTTTCACAGCTTCAGGAGAATGCACGGTATCCACACTGAATGTAAAGGACAGCATATAGAGCCCTaGTCAGAACCATCTGCATTG +
Preference number: 5 (lower is better)
Translates to: KHFHSFRRMHGIHTECKGQHIEP*SEPSAL
Trigger: CAATGCAGATGGTTCTGACAAGGGCTCTATATGCTG...TCCTTTACATTCAGTGTGGATACCGTGCATTCTCCTGAAGCTGTGAAAGTGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CAA 90 bp ATTGGTATCTGGAGAGTAGCAAGTTATAATAGTAAGGTTTCCCATGGTGGTGCAGGTGAAACCAGGTGCTaGGGTAGCAAAGGACTCCAA +
Preference number: 5 (lower is better)
Translates to: IGIWRVASYNSKVSHGGAGETRC*GSKGLQ
Trigger: TTGGAGTCCTTTGCTACCCAAGCACCTGGTTTCACC...TGCACCACCATGGGAAACCTTACTATTATAACTTGCTACTCTCCAGATACCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556728.1
CDS-3UTR CAA 90 bp ATAATAGAAAATGACAACAGCAGCAACGCTAACAAAGTGAGATTTCACAGATACGCAGCCGCGTGGACATaGGCAGAGGAGTTAAACAGG +
Preference number: 5 (lower is better)
Translates to: IIENDNSSNANKVRFHRYAAAWT*AEELNR
Trigger: CCTGTTTAACTCCTCTGCCAATGTCCACGCGGCTGC...GTATCTGTGAAATCTCACTTTGTTAGCGTTGCTGCTGTTGTCATTTTCTATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555004.3
ENST00000556728.1
CDS-3UTR CAA 90 bp AGTAATCCTATTAACATGGCGGCTTCCAGGGAAGAGTGCCGCTTCTGGACAACTAAGATTTGCATTGTTTaGTCCTTTGTCACTTTCCCT +
Preference number: 5 (lower is better)
Translates to: SNPINMAASREECRFWTTKICIV*SFVTFP
Trigger: AGGGAAAGTGACAAAGGACAAAACAATGCAAATCTT...AGTTGTCCAGAAGCGGCACTCTTCCCTGGAAGCCGCCATGTTAATAGGATTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CAA 90 bp AAATATACACGAGAGCTTCCTAACCAGCTTTTTAAGTTTCTCCACTACAGAGGGCCTCAAGTTAAAAGGTaGGAAGCTCCCTTCTGCCAG +
Preference number: 5 (lower is better)
Translates to: KYTRELPNQLFKFLHYRGPQVKR*EAPFCQ
Trigger: CTGGCAGAAGGGAGCTTCCAACCTTTTAACTTGAGG...CCCTCTGTAGTGGAGAAACTTAAAAAGCTGGTTAGGAAGCTCTCGTGTATATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CAA 90 bp ATAATAGAAAATGACAACAGCAGCAACGCTAACAAAGTGAGATTTCACAGATACATGACATGCTGGGAGTaGCAGATCACTGTCCTCAGC +
Preference number: 5 (lower is better)
Translates to: IIENDNSSNANKVRFHRYMTCWE*QITVLS
Trigger: GCTGAGGACAGTGATCTGCAACTCCCAGCATGTCAT...GTATCTGTGAAATCTCACTTTGTTAGCGTTGCTGCTGTTGTCATTTTCTATTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CAA 90 bp CGAAATCCTTTATTAAGAAAGAGTCTTCACTGTAGAGAAGTCAGTGATCGCATGATTTGCCTCTTGACCTaGATTTCATGGGAAAGGGGA +
Preference number: 5 (lower is better)
Translates to: RNPLLRKSLHCREVSDRMICLLT*ISWERG
Trigger: TCCCCTTTCCCATGAAATCAAGGTCAAGAGGCAAAT...CATGCGATCACTGACTTCTCTACAGTGAAGACTCTTTCTTAATAAAGGATTTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CAA 90 bp GTAAGACACAAAAACATTTCCGATGCTCTCGGCATGAAGAATTGGTATCTGGAGAGTCTTATTTGCCTCTaGACCTTGATTTCATGGGAA +
Preference number: 5 (lower is better)
Translates to: VRHKNISDALGMKNWYLESLICL*TLISWE
Trigger: TTCCCATGAAATCAAGGTCAAGAGGCAAATAAGACT...CTCCAGATACCAATTCTTCATGCCGAGAGCATCGGAAATGTTTTTGTGTCTTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CAA 90 bp ATAATAGAAAATGACAACAGCAGCAACGCTAACAAAGTGAGATTTCACAGATACAAAGTGCCATTTGTCTaGCAGGGATCAGGCAGCAGT +
Preference number: 5 (lower is better)
Translates to: IIENDNSSNANKVRFHRYKVPFV*QGSGSS
Trigger: ACTGCTGCCTGATCCCTGCAAGACAAATGGCACTTT...GTATCTGTGAAATCTCACTTTGTTAGCGTTGCTGCTGTTGTCATTTTCTATTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CAA 90 bp AGACACAAAAACATTTCCGATGCTCTCGGCATGAAGAATTGGTATCTGGAGAGTTTTATGGCGTCCATTTaGTGTACTTTTTGGCTCTTC +
Preference number: 5 (lower is better)
Translates to: RHKNISDALGMKNWYLESFMASI*CTFWLF
Trigger: GAAGAGCCAAAAAGTACACAAAATGGACGCCATAAA...ACTCTCCAGATACCAATTCTTCATGCCGAGAGCATCGGAAATGTTTTTGTGTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CAA 90 bp GTAAGACACAAAAACATTTCCGATGCTCTCGGCATGAAGAATTGGTATCTGGAGCTAGGTTCGATAAGTTaGCATAAAAACAAGACACAC +
Preference number: 5 (lower is better)
Translates to: VRHKNISDALGMKNWYLELGSIS*HKNKTH
Trigger: GTGTGTCTTGTTTTTATGCAAACTTATCGAACCTAG...CTCCAGATACCAATTCTTCATGCCGAGAGCATCGGAAATGTTTTTGTGTCTTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS-3UTR CAA 90 bp AGACACAAAAACATTTCCGATGCTCTCGGCATGAAGAATTGGTATCTGGAGAGTCTACAGAGGGTGTTATaGACACAATTCTTCTGTTTT +
Preference number: 5 (lower is better)
Translates to: RHKNISDALGMKNWYLESLQRVL*TQFFCF
Trigger: AAAACAGAAGAATTGTGTCAATAACACCCTCTGTAG...ACTCTCCAGATACCAATTCTTCATGCCGAGAGCATCGGAAATGTTTTTGTGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555004.3
CDS TCA 72 bp CGGGTCAGCCGCCTGCACAGTTGGCGGGGATCGGGCTaGGCAGCGAGCGTCCGGAGACCGCACGGCGCACTC +
Preference number: 6 (lower is better)
Translates to: RVSRLHSWRGSG*AASVRRPHGAL
Trigger: GAGTGCGCCGTGCGGTCTCCGGACGCTCGCTGCTCAGCCCGATCCCCGCCAACTGTGCAGGCGGCTGACCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553764.1
ENST00000555004.3
ENST00000556728.1
CDS GCA 72 bp CCATGGTGTCGCTGCAGCCAGCGCTCGAGTCCTCGCTaGTGCCGCTGCCGCTGCGGGTCAGCCGCCTGCACA +
Preference number: 6 (lower is better)
Translates to: PWCRCSQRSSPR*CRCRCGSAACT
Trigger: TGTGCAGGCGGCTGACCCGCAGCGGCAGCGGCAGCAGCGAGGACTCGAGCGCTGGCTGCAGCGACACCATGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000553764.1
ENST00000553782.1
ENST00000555004.3
ENST00000556728.1
CDS CCA 72 bp ACGGCGTCGTTGGAGGACCGAGGAGGATCTTCCGGCTaGCCCTGGCCATTGGCAGCCGCGTGGACATTGGCA +
Preference number: 6 (lower is better)
Translates to: TASLEDRGGSSG*PWPLAAAWTLA
Trigger: TGCCAATGTCCACGCGGCTGCCAATGGCCAGGGCCAGCCGGAAGATCCTCCTCGGTCCTCCAACGACGCCGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000553764.1
ENST00000553782.1
ENST00000555004.3
ENST00000556728.1
CDS CCA 72 bp TCGTTGGAGGACCGAGGAGGATCTTCCGGCTGGCCCTaGCCATTGGCAGCCGCGTGGACATTGGCAGAGGAG +
Preference number: 6 (lower is better)
Translates to: SLEDRGGSSGWP*PLAAAWTLAEE
Trigger: CTCCTCTGCCAATGTCCACGCGGCTGCCAATGGCCAGGGCCAGCCGGAAGATCCTCCTCGGTCCTCCAACGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000553764.1
ENST00000553782.1
ENST00000555004.3
ENST00000556728.1
CDS CAA 90 bp GCGTCGTTGGAGGACCGAGGAGGATCTTCCGGCTGGCCCTGGCCATaGGCAGCCGCGTGGACATTGGCAGAGGAGTTAAACAGGGAGTAC +
Preference number: 6 (lower is better)
Translates to: ASLEDRGGSSGWPWP*AAAWTLAEELNREY
Trigger: GTACTCCCTGTTTAACTCCTCTGCCAATGTCCACGCGGCTGCCAATGGCCAGGGCCAGCCGGAAGATCCTCCTCGGTCCTCCAACGACGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000553764.1
ENST00000553782.1
ENST00000555004.3
ENST00000556728.1
CDS TCA 72 bp CCCCATGGTGGTGCAGGGTGTGCCGTCCTCAGAAGGTaGAGGCATACACCACGCCCACCACCACGATGTTCC +
Preference number: 6 (lower is better)
Translates to: PHGGAGCAVLRR*RHTPRPPPRCS
Trigger: GGAACATCGTGGTGGTGGGCGTGGTGTATGCCTTCACCTTCTGAGGACGGCACACCCTGCACCACCATGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553764.1
ENST00000553782.1
ENST00000555004.3
CDS CAA 72 bp GAGGACCGAGGAGGATCTTCCGGCTGGCCCTGGCCATaGGCAGCCGCGTGGACATTGGCAGAGGAGTTAAAC +
Preference number: 6 (lower is better)
Translates to: EDRGGSSGWPWP*AAAWTLAEELN
Trigger: GTTTAACTCCTCTGCCAATGTCCACGCGGCTGCCAATGGCCAGGGCCAGCCGGAAGATCCTCCTCGGTCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000553764.1
ENST00000553782.1
ENST00000555004.3
ENST00000556728.1
CDS TCA 72 bp TCCCATGGTGGTGCAGGGTGTGCCGTCCTCAGAAGGTaGAGGCATACACCACGCCCACCACCACGATGTTCC +
Preference number: 6 (lower is better)
Translates to: SHGGAGCAVLRR*RHTPRPPPRCS
Trigger: GGAACATCGTGGTGGTGGGCGTGGTGTATGCCTTCACCTTCTGAGGACGGCACACCCTGCACCACCATGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556728.1
CDS CCA 72 bp GGATCTTCCGGCTGGCCCTGGCCATTGGCAGCCGCGTaGACATTGGCAGAGGAGTTAAACAGGGAGTACTCG +
Preference number: 6 (lower is better)
Translates to: GSSGWPWPLAAA*TLAEELNREYS
Trigger: CGAGTACTCCCTGTTTAACTCCTCTGCCAATGTCCACGCGGCTGCCAATGGCCAGGGCCAGCCGGAAGATCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000553764.1
ENST00000553782.1
ENST00000555004.3
ENST00000556728.1
CDS CAA 90 bp TTCCCCAGCGTAGCTATGATGGCAATCCATAGCAAGACGGCGTCGTaGGAGGACCGAGGAGGATCTTCCGGCTGGCCCTGGCCATTGGCA +
Preference number: 6 (lower is better)
Translates to: FPSVAMMAIHSKTAS*EDRGGSSGWPWPLA
Trigger: TGCCAATGGCCAGGGCCAGCCGGAAGATCCTCCTCGGTCCTCCAACGACGCCGTCTTGCTATGGATTGCCATCATAGCTACGCTGGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000553764.1
ENST00000553782.1
ENST00000555004.3
ENST00000556728.1
CDS CAA 72 bp GTAGCTATGATGGCAATCCATAGCAAGACGGCGTCGTaGGAGGACCGAGGAGGATCTTCCGGCTGGCCCTGG +
Preference number: 6 (lower is better)
Translates to: VAMMAIHSKTAS*EDRGGSSGWPW
Trigger: CCAGGGCCAGCCGGAAGATCCTCCTCGGTCCTCCAACGACGCCGTCTTGCTATGGATTGCCATCATAGCTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000553764.1
ENST00000553782.1
ENST00000555004.3
ENST00000556728.1
CDS CAA 90 bp TGGCAACGGCAGACTGGAAAGGAGTTAGGCTGGTCCATGCATGATTaGGCATCCTCACTTGTTATTCCCCAGGCTCACTTGACCTGCGCG +
Preference number: 6 (lower is better)
Translates to: WQRQTGKELGWSMHD*ASSLVIPQAHLTCA
Trigger: CGCGCAGGTCAAGTGAGCCTGGGGAATAACAAGTGAGGATGCCAAATCATGCATGGACCAGCCTAACTCCTTTCCAGTCTGCCGTTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553764.1
CDS TCA 72 bp TGGAGCCAGCTCTGGGTCTTCTCTAGGGTCACAGACTaGTGGAGAAATCCGGGATTTGTCTTTGTTCTGCGC +
Preference number: 6 (lower is better)
Translates to: WSQLWVFSRVTD*WRNPGFVFVLR
Trigger: GCGCAGAACAAAGACAAATCCCGGATTTCTCCATCAGTCTGTGACCCTAGAGAAGACCCAGAGCTGGCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553782.1
CDS TCA 72 bp ACGGCAGACTGGAAAGGAGTTAGGCTGGTCCATGCATaGTTTGGCATCCTCACTTGTTATTCCCCAGGCTCA +
Preference number: 6 (lower is better)
Translates to: TADWKGVRLVHA*FGILTCYSPGS
Trigger: TGAGCCTGGGGAATAACAAGTGAGGATGCCAAATCATGCATGGACCAGCCTAACTCCTTTCCAGTCTGCCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553764.1