Pregenerated sensors for C10ORF55 (Homo sapiens)
Ensembl gene IDs: ENSG00000222047Ensembl transcript IDs: ENST00000409178.5
Found 44 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GGCTGCACGGAGTCAAGGCGCCCCGTCCCGGGCGTCCCCCGCGGGTaGCGATCCAGGCTGCCCGGAGTCCGGAGCCCAGAGAGGAGAGAG | + |
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Preference number: 5 (lower is better) Translates to: GCTESRRPVPGVPRG*RSRLPGVRSPERRE Trigger: CTCTCTCCTCTCTGGGCTCCGGACTCCGGGCAGCCTGGATCGGCACCCGCGGGGGACGCCCGGGACGGGGCGCCTTGACTCCGTGCAGCC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000409178.5 |
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| CDS GCA 90 bp | GGGGCGGGCCCTGATATAGAGCAGGCGCCGCGGGTCGCAGCACAGTaGGGAGACCGCAGCCCCGGAGCCCGGGCCAGGGTCCACCTGTCC | + |
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Preference number: 5 (lower is better) Translates to: GAGPDIEQAPRVAAQ*GDRSPGARARVHLS Trigger: GGACAGGTGGACCCTGGCCCGGGCTCCGGGGCTGCGGTCTCCGCACTGTGCTGCGACCCGCGGCGCCTGCTCTATATCAGGGCCCGCCCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000409178.5 |
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| CDS GCA 90 bp | AGAGACAGCTGGGGAGCCTGGTCACCGCGGGCATCTCCCCTGCGCTaGAGTCGCCCGCCTGGCCTGCCTTCCCGTTCCTCCGCCTCTTGC | + |
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Preference number: 5 (lower is better) Translates to: RDSWGAWSPRASPLR*SRPPGLPSRSSASC Trigger: GCAAGAGGCGGAGGAACGGGAAGGCAGGCCAGGCGGGCGACTGCAGCGCAGGGGAGATGCCCGCGGTGACCAGGCTCCCCAGCTGTCTCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000409178.5 |
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| CDS GCA 90 bp | AGGAGAGAGACAGCTGGGGAGCCTGGTCACCGCGGGCATCTCCCCTaGGCTGCAGTCGCCCGCCTGGCCTGCCTTCCCGTTCCTCCGCCT | + |
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Preference number: 5 (lower is better) Translates to: RRETAGEPGHRGHLP*AAVARLACLPVPPP Trigger: AGGCGGAGGAACGGGAAGGCAGGCCAGGCGGGCGACTGCAGCGCAGGGGAGATGCCCGCGGTGACCAGGCTCCCCAGCTGTCTCTCTCCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000409178.5 |
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| CDS CCA 90 bp | ATCCAGGCTGCCCGGAGTCCGGAGCCCAGAGAGGAGAGAGACAGCTaGGGAGCCTGGTCACCGCGGGCATCTCCCCTGCGCTGCAGTCGC | + |
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Preference number: 5 (lower is better) Translates to: IQAARSPEPREERDS*GAWSPRASPLRCSR Trigger: GCGACTGCAGCGCAGGGGAGATGCCCGCGGTGACCAGGCTCCCCAGCTGTCTCTCTCCTCTCTGGGCTCCGGACTCCGGGCAGCCTGGAT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409178.5 |
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| CDS CCA 90 bp | CAGCTGGGCCCTGGATCCGCAGTCACACCAAGGAAGAGAATGGCCTaGCCCTCTGAGGGTCCCCAGGGAGGAAACGGGCACCACCCGCTT | + |
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Preference number: 5 (lower is better) Translates to: QLGPGSAVTPRKRMA*PSEGPQGGNGHHPL Trigger: AAGCGGGTGGTGCCCGTTTCCTCCCTGGGGACCCTCAGAGGGCCAGGCCATTCTCTTCCTTGGTGTGACTGCGGATCCAGGGCCCAGCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409178.5 |
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| CDS CCA 90 bp | CCTGTGCGCCTTCTCTCCTCTCTGCAATTCGGGGACTCCTTGCACTaGGGCAGGCCCCCGGCCAGGTGCATGGGAGGAAGCACGGAGAAT | + |
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Preference number: 5 (lower is better) Translates to: PVRLLSSLQFGDSLH*GRPPARCMGGSTEN Trigger: ATTCTCCGTGCTTCCTCCCATGCACCTGGCCGGGGGCCTGCCCCAGTGCAAGGAGTCCCCGAATTGCAGAGAGGAGAGAAGGCGCACAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000409178.5 |
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| CDS TCA 90 bp | GGAAGAGGCCGCCGGGACTGCCCCAGCCTGCGGGCATCTGGTAGATaGAGCTTGCTTGGGTCAATCCATTTCTCCTGGCTGGAAACCCAT | + |
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Preference number: 5 (lower is better) Translates to: GRGRRDCPSLRASGR*SLLGSIHFSWLETH Trigger: ATGGGTTTCCAGCCAGGAGAAATGGATTGACCCAAGCAAGCTTCATCTACCAGATGCCCGCAGGCTGGGGCAGTCCCGGCGGCCTCTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409178.5 |
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| CDS GCA 90 bp | GCCGCCGGGACTGCCCCAGCCTGCGGGCATCTGGTAGATGAAGCTTaGTTGGGTCAATCCATTTCTCCTGGCTGGAAACCCATGGTCTTC | + |
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Preference number: 5 (lower is better) Translates to: AAGTAPACGHLVDEA*LGQSISPGWKPMVF Trigger: GAAGACCATGGGTTTCCAGCCAGGAGAAATGGATTGACCCAAGCAAGCTTCATCTACCAGATGCCCGCAGGCTGGGGCAGTCCCGGCGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409178.5 |
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| CDS GCA 90 bp | GCGCCTGCTTCTCTGCGTCCTGGTCGTGAGCGACTCCAAAGTGAGTaGGCTCTTGCTTTGACTGATGCTGCCCAAGGACCTCTGATCAGC | + |
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Preference number: 5 (lower is better) Translates to: APASLRPGRERLQSE*ALALTDAAQGPLIS Trigger: GCTGATCAGAGGTCCTTGGGCAGCATCAGTCAAAGCAAGAGCGCACTCACTTTGGAGTCGCTCACGACCAGGACGCAGAGAAGCAGGCGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000409178.5 |
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| CDS CCA 90 bp | GTGGGTTTTGGGATTGGGGCCAGTTTACCCTCACCCTGGAGTCCCTaGAGCATGGGACCTTTGATGAAGCCTCCTCCCGAATCTCTTCCA | + |
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Preference number: 5 (lower is better) Translates to: VGFGIGASLPSPWSP*SMGPLMKPPPESLP Trigger: TGGAAGAGATTCGGGAGGAGGCTTCATCAAAGGTCCCATGCTCCAGGGACTCCAGGGTGAGGGTAAACTGGCCCCAATCCCAAAACCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000409178.5 |
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| CDS CCA 90 bp | AATAAGCCCGGCTTTGTTCCATCCACTGGTTGTGTTGGTGATATCTaGGGACTGCCACTGAACAGACGCACAGAGGGAGCCCCTACAGGC | + |
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Preference number: 5 (lower is better) Translates to: NKPGFVPSTGCVGDI*GLPLNRRTEGAPTG Trigger: GCCTGTAGGGGCTCCCTCTGTGCGTCTGTTCAGTGGCAGTCCCCAGATATCACCAACACAACCAGTGGATGGAACAAAGCCGGGCTTATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409178.5 |
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| CDS GCA 90 bp | CCCAAAAGACCCGTTAACACTTCAATAGGAAGCACCAACAGTTTATaGCCTAGGACTTTGTTCCCACAATCCTGTAACATCATATCACGA | + |
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Preference number: 5 (lower is better) Translates to: PKRPVNTSIGSTNSL*PRTLFPQSCNIISR Trigger: TCGTGATATGATGTTACAGGATTGTGGGAACAAAGTCCTAGGGCATAAACTGTTGGTGCTTCCTATTGAAGTGTTAACGGGTCTTTTGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409178.5 |
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| CDS GCA 72 bp | GAGTCAAGGCGCCCCGTCCCGGGCGTCCCCCGCGGGTaGCGATCCAGGCTGCCCGGAGTCCGGAGCCCAGAG | + |
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Preference number: 6 (lower is better) Translates to: ESRRPVPGVPRG*RSRLPGVRSPE Trigger: CTCTGGGCTCCGGACTCCGGGCAGCCTGGATCGGCACCCGCGGGGGACGCCCGGGACGGGGCGCCTTGACTC 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000409178.5 |
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| CDS GCA 72 bp | TGGGGAGCCTGGTCACCGCGGGCATCTCCCCTGCGCTaGAGTCGCCCGCCTGGCCTGCCTTCCCGTTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: WGAWSPRASPLR*SRPPGLPSRSS Trigger: GGAGGAACGGGAAGGCAGGCCAGGCGGGCGACTGCAGCGCAGGGGAGATGCCCGCGGTGACCAGGCTCCCCA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000409178.5 |
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| CDS GCA 72 bp | CCTGATATAGAGCAGGCGCCGCGGGTCGCAGCACAGTaGGGAGACCGCAGCCCCGGAGCCCGGGCCAGGGTC | + |
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Preference number: 6 (lower is better) Translates to: PDIEQAPRVAAQ*GDRSPGARARV Trigger: GACCCTGGCCCGGGCTCCGGGGCTGCGGTCTCCGCACTGTGCTGCGACCCGCGGCGCCTGCTCTATATCAGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409178.5 |
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| CDS TCA 72 bp | TGTGAGCGTTGCGGAAGCACGCGGGGTCCGGGTCGCTaGGCGCTGCAAGACAGGGGAGGGAGCCGGGCGGGA | + |
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Preference number: 6 (lower is better) Translates to: CERCGSTRGPGR*ALQDRGGSRAG Trigger: TCCCGCCCGGCTCCCTCCCCTGTCTTGCAGCGCTCAGCGACCCGGACCCCGCGTGCTTCCGCAACGCTCACA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000409178.5 |
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| CDS CCA 72 bp | GCCCGGAGTCCGGAGCCCAGAGAGGAGAGAGACAGCTaGGGAGCCTGGTCACCGCGGGCATCTCCCCTGCGC | + |
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Preference number: 6 (lower is better) Translates to: ARSPEPREERDS*GAWSPRASPLR Trigger: GCGCAGGGGAGATGCCCGCGGTGACCAGGCTCCCCAGCTGTCTCTCTCCTCTCTGGGCTCCGGACTCCGGGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409178.5 |
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| CDS CCA 72 bp | ACAGGGTGGCAGCGGAGGCTTGAGAACCACGGGGGTTaGCACTGGCTGGCAAGGGAGGAAGAGGCCGCCGGG | + |
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Preference number: 6 (lower is better) Translates to: TGWQRRLENHGG*HWLAREEEAAG Trigger: CCCGGCGGCCTCTTCCTCCCTTGCCAGCCAGTGCCAACCCCCGTGGTTCTCAAGCCTCCGCTGCCACCCTGT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000409178.5 |
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| CDS GCA 72 bp | GAGGTAGAGAGTCTCCTGTGCGCCTTCTCTCCTCTCTaGAATTCGGGGACTCCTTGCACTGGGGCAGGCCCC | + |
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Preference number: 6 (lower is better) Translates to: EVESLLCAFSPL*NSGTPCTGAGP Trigger: GGGGCCTGCCCCAGTGCAAGGAGTCCCCGAATTGCAGAGAGGAGAGAAGGCGCACAGGAGACTCTCTACCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000409178.5 |
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| CDS TCA 72 bp | CGCCGGGACTGCCCCAGCCTGCGGGCATCTGGTAGATaGAGCTTGCTTGGGTCAATCCATTTCTCCTGGCTG | + |
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Preference number: 6 (lower is better) Translates to: RRDCPSLRASGR*SLLGSIHFSWL Trigger: CAGCCAGGAGAAATGGATTGACCCAAGCAAGCTTCATCTACCAGATGCCCGCAGGCTGGGGCAGTCCCGGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409178.5 |
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| CDS CCA 72 bp | ACTCCTTGCACTGGGGCAGGCCCCCGGCCAGGTGCATaGGAGGAAGCACGGAGAATTTACAAGCCTCTCGAT | + |
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Preference number: 6 (lower is better) Translates to: TPCTGAGPRPGA*EEARRIYKPLD Trigger: ATCGAGAGGCTTGTAAATTCTCCGTGCTTCCTCCCATGCACCTGGCCGGGGGCCTGCCCCAGTGCAAGGAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000409178.5 |
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| CDS TCA 72 bp | CCACTGGTTGTGTTGGTGATATCTGGGGACTGCCACTaGACAGACGCACAGAGGGAGCCCCTACAGGCAGGG | + |
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Preference number: 6 (lower is better) Translates to: PLVVLVISGDCH*TDAQREPLQAG Trigger: CCCTGCCTGTAGGGGCTCCCTCTGTGCGTCTGTTCAGTGGCAGTCCCCAGATATCACCAACACAACCAGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000409178.5 |
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| CDS CCA 72 bp | GGGATTGGGGCCAGTTTACCCTCACCCTGGAGTCCCTaGAGCATGGGACCTTTGATGAAGCCTCCTCCCGAA | + |
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Preference number: 6 (lower is better) Translates to: GIGASLPSPWSP*SMGPLMKPPPE Trigger: TTCGGGAGGAGGCTTCATCAAAGGTCCCATGCTCCAGGGACTCCAGGGTGAGGGTAAACTGGCCCCAATCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409178.5 |
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| CDS CAA 90 bp | CTGCGTCCTGGTCGTGAGCGACTCCAAAGTGAGTGCGCTCTTGCTTaGACTGATGCTGCCCAAGGACCTCTGATCAGCACCAGGGGAGAG | + |
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Preference number: 6 (lower is better) Translates to: LRPGRERLQSECALA*TDAAQGPLISTRGE Trigger: CTCTCCCCTGGTGCTGATCAGAGGTCCTTGGGCAGCATCAGTCAAAGCAAGAGCGCACTCACTTTGGAGTCGCTCACGACCAGGACGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409178.5 |
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| CDS CAA 90 bp | GCCGGGACTGCCCCAGCCTGCGGGCATCTGGTAGATGAAGCTTGCTaGGGTCAATCCATTTCTCCTGGCTGGAAACCCATGGTCTTCCAT | + |
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Preference number: 6 (lower is better) Translates to: AGTAPACGHLVDEAC*GQSISPGWKPMVFH Trigger: ATGGAAGACCATGGGTTTCCAGCCAGGAGAAATGGATTGACCCAAGCAAGCTTCATCTACCAGATGCCCGCAGGCTGGGGCAGTCCCGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409178.5 |
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| CDS GCA 72 bp | ACTGCCCCAGCCTGCGGGCATCTGGTAGATGAAGCTTaGTTGGGTCAATCCATTTCTCCTGGCTGGAAACCC | + |
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Preference number: 6 (lower is better) Translates to: TAPACGHLVDEA*LGQSISPGWKP Trigger: GGGTTTCCAGCCAGGAGAAATGGATTGACCCAAGCAAGCTTCATCTACCAGATGCCCGCAGGCTGGGGCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409178.5 |
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| CDS CAA 72 bp | GCCCCAGCCTGCGGGCATCTGGTAGATGAAGCTTGCTaGGGTCAATCCATTTCTCCTGGCTGGAAACCCATG | + |
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Preference number: 6 (lower is better) Translates to: APACGHLVDEAC*GQSISPGWKPM Trigger: CATGGGTTTCCAGCCAGGAGAAATGGATTGACCCAAGCAAGCTTCATCTACCAGATGCCCGCAGGCTGGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409178.5 |
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| CDS CAA 72 bp | GGTCGTGAGCGACTCCAAAGTGAGTGCGCTCTTGCTTaGACTGATGCTGCCCAAGGACCTCTGATCAGCACC | + |
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Preference number: 6 (lower is better) Translates to: GRERLQSECALA*TDAAQGPLIST Trigger: GGTGCTGATCAGAGGTCCTTGGGCAGCATCAGTCAAAGCAAGAGCGCACTCACTTTGGAGTCGCTCACGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000409178.5 |
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| CDS CCA 72 bp | GGCTTTGTTCCATCCACTGGTTGTGTTGGTGATATCTaGGGACTGCCACTGAACAGACGCACAGAGGGAGCC | + |
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Preference number: 6 (lower is better) Translates to: GFVPSTGCVGDI*GLPLNRRTEGA Trigger: GGCTCCCTCTGTGCGTCTGTTCAGTGGCAGTCCCCAGATATCACCAACACAACCAGTGGATGGAACAAAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000409178.5 |
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| CDS CAA 72 bp | GGGTCCCCAGGGAGGAAACGGGCACCACCCGCTTTCTaGCTGGTTGTCATTTTTGCAGTAGAGTCATCTCCA | + |
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Preference number: 6 (lower is better) Translates to: GSPGRKRAPPAF*LVVIFAVESSP Trigger: TGGAGATGACTCTACTGCAAAAATGACAACCAGCAAGAAAGCGGGTGGTGCCCGTTTCCTCCCTGGGGACCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000409178.5 |
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| CDS CAA 90 bp | TTCTGTCTGTGCTTCTGGGAGAGTATGTCTCGTACATTTGTCGCGTaGATGAAGACTTCACAGCTCCATCAGCTGCGGGCAAGGGGGTCT | + |
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Preference number: 6 (lower is better) Translates to: FCLCFWESMSRTFVA*MKTSQLHQLRARGS Trigger: AGACCCCCTTGCCCGCAGCTGATGGAGCTGTGAAGTCTTCATCAACGCGACAAATGTACGAGACATACTCTCCCAGAAGCACAGACAGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000409178.5 |
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| CDS CAA 90 bp | TTGGGTCAATCCATTTCTCCTGGCTGGAAACCCATGGTCTTCCATTaGAGAACTAGATACGAACAGGGTGAGGCGAGAGGGAGAGGGAAG | + |
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Preference number: 6 (lower is better) Translates to: LGQSISPGWKPMVFH*RTRYEQGEARGRGK Trigger: CTTCCCTCTCCCTCTCGCCTCACCCTGTTCGTATCTAGTTCTCAAATGGAAGACCATGGGTTTCCAGCCAGGAGAAATGGATTGACCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000409178.5 |
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| CDS CAA 90 bp | ACCATCAAACAAACCCCCTTACTGCCGAAAGCAATAAGCCCGGCTTaGTTCCATCCACTGGTTGTGTTGGTGATATCTGGGGACTGCCAC | + |
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Preference number: 6 (lower is better) Translates to: TIKQTPLLPKAISPA*FHPLVVLVISGDCH Trigger: GTGGCAGTCCCCAGATATCACCAACACAACCAGTGGATGGAACAAAGCCGGGCTTATTGCTTTCGGCAGTAAGGGGGTTTGTTTGATGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000409178.5 |
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| CDS TCA 72 bp | TTTGTCCTCCAGTCTCCCAATTCCTCTACTCAGAGGTaGGAACAGAACTTCCACACCCTCCAGAACCTCCAC | + |
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Preference number: 6 (lower is better) Translates to: FVLQSPNSSTQR*EQNFHTLQNLH Trigger: GTGGAGGTTCTGGAGGGTGTGGAAGTTCTGTTCTCACCTCTGAGTAGAGGAATTGGGAGACTGGAGGACAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000409178.5 |
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| CDS CAA 72 bp | TGCTTCTGGGAGAGTATGTCTCGTACATTTGTCGCGTaGATGAAGACTTCACAGCTCCATCAGCTGCGGGCA | + |
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Preference number: 6 (lower is better) Translates to: CFWESMSRTFVA*MKTSQLHQLRA Trigger: TGCCCGCAGCTGATGGAGCTGTGAAGTCTTCATCAACGCGACAAATGTACGAGACATACTCTCCCAGAAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000409178.5 |
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| CDS CAA 72 bp | CAAACCCCCTTACTGCCGAAAGCAATAAGCCCGGCTTaGTTCCATCCACTGGTTGTGTTGGTGATATCTGGG | + |
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Preference number: 6 (lower is better) Translates to: QTPLLPKAISPA*FHPLVVLVISG Trigger: CCCAGATATCACCAACACAACCAGTGGATGGAACAAAGCCGGGCTTATTGCTTTCGGCAGTAAGGGGGTTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000409178.5 |
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| CDS TCA 72 bp | CCTACAACAGTTGGCTTTGTTCTCTCCAGCGAACTGTaGCTGTCTAAATGGAGGAACATGTGTGTCCAACAA | + |
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Preference number: 6 (lower is better) Translates to: PTTVGFVLSSEL*LSKWRNMCVQQ Trigger: TTGTTGGACACACATGTTCCTCCATTTAGACAGTCACAGTTCGCTGGAGAGAACAAAGCCAACTGTTGTAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000409178.5 |
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| CDS GCA 72 bp | CCCGTTAACACTTCAATAGGAAGCACCAACAGTTTATaGCCTAGGACTTTGTTCCCACAATCCTGTAACATC | + |
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Preference number: 6 (lower is better) Translates to: PVNTSIGSTNSL*PRTLFPQSCNI Trigger: GATGTTACAGGATTGTGGGAACAAAGTCCTAGGGCATAAACTGTTGGTGCTTCCTATTGAAGTGTTAACGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000409178.5 |
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| CDS CCA 72 bp | ACGGACTTTAAACCAAGCTGCAAATTTTCAGTAATCTaGCCTTGCCTTTCCCCCTCTGATAGCACCATCAAA | + |
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Preference number: 6 (lower is better) Translates to: TDFKPSCKFSVI*PCLSPSDSTIK Trigger: TTTGATGGTGCTATCAGAGGGGGAAAGGCAAGGCCAGATTACTGAAAATTTGCAGCTTGGTTTAAAGTCCGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000409178.5 |
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| CDS GCA 72 bp | TTTAAACCAAGCTGCAAATTTTCAGTAATCTGGCCTTaGCTTTCCCCCTCTGATAGCACCATCAAACAAACC | + |
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Preference number: 6 (lower is better) Translates to: FKPSCKFSVIWP*LSPSDSTIKQT Trigger: GGTTTGTTTGATGGTGCTATCAGAGGGGGAAAGGCAAGGCCAGATTACTGAAAATTTGCAGCTTGGTTTAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000409178.5 |
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| CDS CAA 90 bp | ACACCCTCCAGAACCTCCACAGTTAGAACTGTCTACATGTTTCCATaGTCTTTACTTTTATTCTTGCCTGCACAAATAAATGAATTGCTC | + |
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Preference number: 6 (lower is better) Translates to: TPSRTSTVRTVYMFP*SLLLFLPAQINELL Trigger: GAGCAATTCATTTATTTGTGCAGGCAAGAATAAAAGTAAAGACAATGGAAACATGTAGACAGTTCTAACTGTGGAGGTTCTGGAGGGTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409178.5 |
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| CDS TCA 72 bp | ATTGTCTTTACTTTTATTCTTGCCTGCACAAATAAATaGATTGCTCATTATGGAAACTTCCCAAAAGACCCG | + |
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Preference number: 6 (lower is better) Translates to: IVFTFILACTNK*IAHYGNFPKDP Trigger: CGGGTCTTTTGGGAAGTTTCCATAATGAGCAATTCATTTATTTGTGCAGGCAAGAATAAAAGTAAAGACAAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000409178.5 |
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| CDS CAA 72 bp | AGAACCTCCACAGTTAGAACTGTCTACATGTTTCCATaGTCTTTACTTTTATTCTTGCCTGCACAAATAAAT | + |
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Preference number: 6 (lower is better) Translates to: RTSTVRTVYMFP*SLLLFLPAQIN Trigger: ATTTATTTGTGCAGGCAAGAATAAAAGTAAAGACAATGGAAACATGTAGACAGTTCTAACTGTGGAGGTTCT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409178.5 |
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