RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for C10ORF105 (Homo sapiens)

Ensembl gene IDs: ENSG00000214688

Ensembl transcript IDs: ENST00000398786.2, ENST00000441508.4

Found 647 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGGTGGGCTGGGGGAGGCGGAGCCACACACGGCCCTGAGGGCACATaGTCAGTGGCACCAGAGGCGGAAGCAGGTGGGGGCCCAGGGTGG +
Preference number: 1 (lower is better)
Translates to: WWAGGGGATHGPEGT*SVAPEAEAGGGPGW
Trigger: CCACCCTGGGCCCCCACCTGCTTCCGCCTCTGGTGCCACTGAGCATGTGCCCTCAGGGCCGTGTGTGGCTCCGCCTCCCCCAGCCCACCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR CCA 90 bp CTGGGGCAGGCTCCCGGGCTTGGGAGGGACAGAAGCGTGGGAGGCTaGCAATGCTCCCCTCCCTGCATCGGGACCAGGAGGCGGGCAGGA +
Preference number: 1 (lower is better)
Translates to: LGQAPGLGRDRSVGG*QCSPPCIGTRRRAG
Trigger: TCCTGCCCGCCTCCTGGTCCCGATGCAGGGAGGGGAGCATTGCCAGCCTCCCACGCTTCTGTCCCTCCCAAGCCCGGGAGCCTGCCCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR CCA 90 bp CCTGCCCACTGGGGCAGGCTCCCGGGCTTGGGAGGGACAGAAGCGTaGGAGGCTGGCAATGCTCCCCTCCCTGCATCGGGACCAGGAGGC +
Preference number: 1 (lower is better)
Translates to: PAHWGRLPGLGGTEA*EAGNAPLPASGPGG
Trigger: GCCTCCTGGTCCCGATGCAGGGAGGGGAGCATTGCCAGCCTCCCACGCTTCTGTCCCTCCCAAGCCCGGGAGCCTGCCCCAGTGGGCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR CCA 90 bp AGCAGGTGGGGGCCCAGGGTGGGTCCGCTGCTCTGGAAGGTGCTGTaGGGAAAGGGGGACCCAGGCCCTCTCCCATCCCAGGGAGTGTGG +
Preference number: 1 (lower is better)
Translates to: SRWGPRVGPLLWKVL*GKGDPGPLPSQGVW
Trigger: CCACACTCCCTGGGATGGGAGAGGGCCTGGGTCCCCCTTTCCCCACAGCACCTTCCAGAGCAGCGGACCCACCCTGGGCCCCCACCTGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR CCA 90 bp TCCGACTCGGAGGCTGAGCCAAACAGGGAATCTGGGCCTGCCCACTaGGGCAGGCTCCCGGGCTTGGGAGGGACAGAAGCGTGGGAGGCT +
Preference number: 1 (lower is better)
Translates to: SDSEAEPNRESGPAH*GRLPGLGGTEAWEA
Trigger: AGCCTCCCACGCTTCTGTCCCTCCCAAGCCCGGGAGCCTGCCCCAGTGGGCAGGCCCAGATTCCCTGTTTGGCTCAGCCTCCGAGTCGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR GCA 90 bp ACAGCTGTCCTGGAGAGGTCCAGACCATCCCACCCTCGGGGAGGCTaGCGCTTTCCCTGGGTGAGGTGTGGAGCTGCTGTGAGCTGTCCT +
Preference number: 1 (lower is better)
Translates to: TAVLERSRPSHPRGG*RFPWVRCGAAVSCP
Trigger: AGGACAGCTCACAGCAGCTCCACACCTCACCCAGGGAAAGCGGCAGCCTCCCCGAGGGTGGGATGGTCTGGACCTCTCCAGGACAGCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR CCA 90 bp CCCTTGCAAAGGCTAGGGCAGATGGGGCGGAACAGGGCACCTCTCTaGCCGGTGCCCGGGAGTGTGCAAAGTCACAGGAAGTGTGCCCCT +
Preference number: 1 (lower is better)
Translates to: PLQRLGQMGRNRAPL*PVPGSVQSHRKCAP
Trigger: AGGGGCACACTTCCTGTGACTTTGCACACTCCCGGGCACCGGCCAGAGAGGTGCCCTGTTCCGCCCCATCTGCCCTAGCCTTTGCAAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR GCA 90 bp AGTCCAGGTGGCATCACCTCCAGCTGCTGGAAATGCCCTGCCTCTTaGCACTCTGTCACAGCACCCGCCCTGGCCTCTGAAGGGAGCCTC +
Preference number: 1 (lower is better)
Translates to: SPGGITSSCWKCPAS*HSVTAPALASEGSL
Trigger: GAGGCTCCCTTCAGAGGCCAGGGCGGGTGCTGTGACAGAGTGGCAAGAGGCAGGGCATTTCCAGCAGCTGGAGGTGATGCCACCTGGACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR GCA 90 bp AGATGGGGCGGAACAGGGCACCTCTCTGGCCGGTGCCCGGGAGTGTaGAAAGTCACAGGAAGTGTGCCCCTCTCTCAGGCAGCTGCTAAC +
Preference number: 1 (lower is better)
Translates to: RWGGTGHLSGRCPGV*KVTGSVPLSQAAAN
Trigger: GTTAGCAGCTGCCTGAGAGAGGGGCACACTTCCTGTGACTTTGCACACTCCCGGGCACCGGCCAGAGAGGTGCCCTGTTCCGCCCCATCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR TCA 90 bp GGAGTGGAGGACAGCTGCCCTTCCAGCGGGGCCCATCCAGGTGTTTaGCCCAGGTGCTATACCCGCCAGTCCCTGACAGCAGTTGGCTTT +
Preference number: 1 (lower is better)
Translates to: GVEDSCPSSGAHPGV*PRCYTRQSLTAVGF
Trigger: AAAGCCAACTGCTGTCAGGGACTGGCGGGTATAGCACCTGGGTCAAACACCTGGATGGGCCCCGCTGGAAGGGCAGCTGTCCTCCACTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR GCA 90 bp AGAAGGGAGGACCCTGAAAACAATTTGGGTGTGCACCCACACCTCTaGCCAGAGGCCTCAGTTGCTGGGTGGGGAGGGAGGCCCGGAGTG +
Preference number: 1 (lower is better)
Translates to: RREDPENNLGVHPHL*PEASVAGWGGRPGV
Trigger: CACTCCGGGCCTCCCTCCCCACCCAGCAACTGAGGCCTCTGGGCAGAGGTGTGGGTGCACACCCAAATTGTTTTCAGGGTCCTCCCTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR CCA 90 bp GAGGGCAAGGCTTCTGTGGCGAGCGAGGGTGCTGCTTCTAGGAGGTaGTTACGAGCCCCAGGTTGTACCCTGTGGAGCCTCAGGCCAAAG +
Preference number: 1 (lower is better)
Translates to: EGKASVASEGAASRR*LRAPGCTLWSLRPK
Trigger: CTTTGGCCTGAGGCTCCACAGGGTACAACCTGGGGCTCGTAACCACCTCCTAGAAGCAGCACCCTCGCTCGCCACAGAAGCCTTGCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR CCA 90 bp GGTGAGGTGTGGAGCTGCTGTGAGCTGTCCTCCTCCGAGTCCAGGTaGCATCACCTCCAGCTGCTGGAAATGCCCTGCCTCTTGCCACTC +
Preference number: 1 (lower is better)
Translates to: GEVWSCCELSSSESR*HHLQLLEMPCLLPL
Trigger: GAGTGGCAAGAGGCAGGGCATTTCCAGCAGCTGGAGGTGATGCCACCTGGACTCGGAGGAGGACAGCTCACAGCAGCTCCACACCTCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR CCA 90 bp AACTTCTCCATGCTGGGCTTTGGCACCTGGAGGGCAAGGCTTCTGTaGCGAGCGAGGGTGCTGCTTCTAGGAGGTGGTTACGAGCCCCAG +
Preference number: 1 (lower is better)
Translates to: NFSMLGFGTWRARLL*RARVLLLGGGYEPQ
Trigger: CTGGGGCTCGTAACCACCTCCTAGAAGCAGCACCCTCGCTCGCCACAGAAGCCTTGCCCTCCAGGTGCCAAAGCCCAGCATGGAGAAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR TCA 90 bp TCTGCCCAGAGGCCTCAGTTGCTGGGTGGGGAGGGAGGCCCGGAGTaGATGAGTCTCTTTACCAACTATGGGGTTTCCGACTCGGAGGCT +
Preference number: 1 (lower is better)
Translates to: SAQRPQLLGGEGGPE*MSLFTNYGVSDSEA
Trigger: AGCCTCCGAGTCGGAAACCCCATAGTTGGTAAAGAGACTCATTCACTCCGGGCCTCCCTCCCCACCCAGCAACTGAGGCCTCTGGGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR TCA 90 bp CAGGCGCAACAGCTCCAAGGCTCAGAGGGAGAGAAGGGAGGACCCTaGAAACAATTTGGGTGTGCACCCACACCTCTGCCCAGAGGCCTC +
Preference number: 1 (lower is better)
Translates to: QAQQLQGSEGEKGGP*KQFGCAPTPLPRGL
Trigger: GAGGCCTCTGGGCAGAGGTGTGGGTGCACACCCAAATTGTTTTCAGGGTCCTCCCTTCTCTCCCTCTGAGCCTTGGAGCTGTTGCGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR CCA 90 bp GGTGCTGCTTCTAGGAGGTGGTTACGAGCCCCAGGTTGTACCCTGTaGAGCCTCAGGCCAAAGGCCCAGATGACCACGAGTGCACATCTC +
Preference number: 1 (lower is better)
Translates to: GAASRRWLRAPGCTL*SLRPKAQMTTSAHL
Trigger: GAGATGTGCACTCGTGGTCATCTGGGCCTTTGGCCTGAGGCTCCACAGGGTACAACCTGGGGCTCGTAACCACCTCCTAGAAGCAGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR TCA 90 bp CATCAAGCAGCAGCGAGGGGGTCTGCAGAGAGGAAGGTGCTCTTCTaGGGATCATCTTTGGGAAAGGGCGCTGGCCTGGGCATGCAAGGA +
Preference number: 1 (lower is better)
Translates to: HQAAARGSAERKVLF*GSSLGKGAGLGMQG
Trigger: TCCTTGCATGCCCAGGCCAGCGCCCTTTCCCAAAGATGATCCTCAGAAGAGCACCTTCCTCTCTGCAGACCCCCTCGCTGCTGCTTGATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR TCA 90 bp GCCTCTGAAGGGAGCCTCCTCGATCATCTTCAATCCCTTCCTGATTaGTCCCAACGTGGGTGCCCTGAAGAGGGGCCACCAAGACGGCTG +
Preference number: 1 (lower is better)
Translates to: ASEGSLLDHLQSLPD*SQRGCPEEGPPRRL
Trigger: CAGCCGTCTTGGTGGCCCCTCTTCAGGGCACCCACGTTGGGATCAATCAGGAAGGGATTGAAGATGATCGAGGAGGCTCCCTTCAGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR TCA 90 bp GTGAATGAGTCTCTTTACCAACTATGGGGTTTCCGACTCGGAGGCTaGGCCAAACAGGGAATCTGGGCCTGCCCACTGGGGCAGGCTCCC +
Preference number: 1 (lower is better)
Translates to: VNESLYQLWGFRLGG*AKQGIWACPLGQAP
Trigger: GGGAGCCTGCCCCAGTGGGCAGGCCCAGATTCCCTGTTTGGCTCAGCCTCCGAGTCGGAAACCCCATAGTTGGTAAAGAGACTCATTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR GCA 90 bp ACCTCTCTGGCCGGTGCCCGGGAGTGTGCAAAGTCACAGGAAGTGTaGCCCTCTCTCAGGCAGCTGCTAACACCTGTCTTCCTTCAACTC +
Preference number: 1 (lower is better)
Translates to: TSLAGARECAKSQEV*PSLRQLLTPVFLQL
Trigger: GAGTTGAAGGAAGACAGGTGTTAGCAGCTGCCTGAGAGAGGGGCACACTTCCTGTGACTTTGCACACTCCCGGGCACCGGCCAGAGAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR CCA 90 bp GCACTCACCAAAACCACAGATAGCATCCCTAGTGTGGGCAGGACTTaGGACCCCACAGCTGTCCTGGAGAGGTCCAGACCATCCCACCCT +
Preference number: 1 (lower is better)
Translates to: ALTKTTDSIPSVGRT*DPTAVLERSRPSHP
Trigger: AGGGTGGGATGGTCTGGACCTCTCCAGGACAGCTGTGGGGTCCCAAGTCCTGCCCACACTAGGGATGCTATCTGTGGTTTTGGTGAGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR CCA 90 bp GCTCTGTGTTATGCCAGCTTCCACCAAGACTCCTGCCTCAGAGGGTaGGGACACACCCAGGCTGGGCCACGCTTCACTCTGTACACAGAA +
Preference number: 1 (lower is better)
Translates to: ALCYASFHQDSCLRG*GHTQAGPRFTLYTE
Trigger: TTCTGTGTACAGAGTGAAGCGTGGCCCAGCCTGGGTGTGTCCCCACCCTCTGAGGCAGGAGTCTTGGTGGAAGCTGGCATAACACAGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR CCA 90 bp GAACCTTTGCCATTTGGCAACTTCTCCATGCTGGGCTTTGGCACCTaGAGGGCAAGGCTTCTGTGGCGAGCGAGGGTGCTGCTTCTAGGA +
Preference number: 1 (lower is better)
Translates to: EPLPFGNFSMLGFGT*RARLLWRARVLLLG
Trigger: TCCTAGAAGCAGCACCCTCGCTCGCCACAGAAGCCTTGCCCTCCAGGTGCCAAAGCCCAGCATGGAGAAGTTGCCAAATGGCAAAGGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR GCA 90 bp AAGTCTTTCATCAAGCAGCAGCGAGGGGGTCTGCAGAGAGGAAGGTaGTCTTCTGAGGATCATCTTTGGGAAAGGGCGCTGGCCTGGGCA +
Preference number: 1 (lower is better)
Translates to: KSFIKQQRGGLQRGR*SSEDHLWERALAWA
Trigger: TGCCCAGGCCAGCGCCCTTTCCCAAAGATGATCCTCAGAAGAGCACCTTCCTCTCTGCAGACCCCCTCGCTGCTGCTTGATGAAAGACTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR CCA 90 bp CACTTGACTAAAGGGAACCTTTGCCATTTGGCAACTTCTCCATGCTaGGCTTTGGCACCTGGAGGGCAAGGCTTCTGTGGCGAGCGAGGG +
Preference number: 1 (lower is better)
Translates to: HLTKGNLCHLATSPC*ALAPGGQGFCGERG
Trigger: CCCTCGCTCGCCACAGAAGCCTTGCCCTCCAGGTGCCAAAGCCCAGCATGGAGAAGTTGCCAAATGGCAAAGGTTCCCTTTAGTCAAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR GCA 90 bp TTGTACCCTGTGGAGCCTCAGGCCAAAGGCCCAGATGACCACGAGTaGACATCTCTTGACCAGAAGTCTTTCATCAAGCAGCAGCGAGGG +
Preference number: 1 (lower is better)
Translates to: LYPVEPQAKGPDDHE*TSLDQKSFIKQQRG
Trigger: CCCTCGCTGCTGCTTGATGAAAGACTTCTGGTCAAGAGATGTGCACTCGTGGTCATCTGGGCCTTTGGCCTGAGGCTCCACAGGGTACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR GCA 90 bp GGCTGGGCCACGCTTCACTCTGTACACAGAAGCCTCATACTTCTGTaGACAGAACTGGGGAGTCAAAGTGAGGGGCTGGACAATGTCTGG +
Preference number: 1 (lower is better)
Translates to: GWATLHSVHRSLILL*TELGSQSEGLDNVW
Trigger: CCAGACATTGTCCAGCCCCTCACTTTGACTCCCCAGTTCTGTGCACAGAAGTATGAGGCTTCTGTGTACAGAGTGAAGCGTGGCCCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR TCA 90 bp GGGCCAGCACAGATGCCAGGACAGTGTCTTGGCCCCGGTGTAGGCTaGGCATTTCACTTGACTAAAGGGAACCTTTGCCATTTGGCAACT +
Preference number: 1 (lower is better)
Translates to: GPAQMPGQCLGPGVG*AFHLTKGNLCHLAT
Trigger: AGTTGCCAAATGGCAAAGGTTCCCTTTAGTCAAGTGAAATGCTCAGCCTACACCGGGGCCAAGACACTGTCCTGGCATCTGTGCTGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR CCA 90 bp GAGGAGAGGTCAAGGGTTTGGGATTCTGAGAAGCCCATCCTGGGGTaGGACTGCTTTGACGGGTCATCAGCAAAGCACTCACCAAAACCA +
Preference number: 1 (lower is better)
Translates to: EERSRVWDSEKPILG*DCFDGSSAKHSPKP
Trigger: TGGTTTTGGTGAGTGCTTTGCTGATGACCCGTCAAAGCAGTCCCACCCCAGGATGGGCTTCTCAGAATCCCAAACCCTTGACCTCTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR CCA 90 bp GTTGTGAGGAGAGGTCAAGGGTTTGGGATTCTGAGAAGCCCATCCTaGGGTGGGACTGCTTTGACGGGTCATCAGCAAAGCACTCACCAA +
Preference number: 1 (lower is better)
Translates to: VVRRGQGFGILRSPS*GGTALTGHQQSTHQ
Trigger: TTGGTGAGTGCTTTGCTGATGACCCGTCAAAGCAGTCCCACCCCAGGATGGGCTTCTCAGAATCCCAAACCCTTGACCTCTCCTCACAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR GCA 90 bp TTTCACTTGACTAAAGGGAACCTTTGCCATTTGGCAACTTCTCCATaGTGGGCTTTGGCACCTGGAGGGCAAGGCTTCTGTGGCGAGCGA +
Preference number: 1 (lower is better)
Translates to: FHLTKGNLCHLATSP*WALAPGGQGFCGER
Trigger: TCGCTCGCCACAGAAGCCTTGCCCTCCAGGTGCCAAAGCCCAGCATGGAGAAGTTGCCAAATGGCAAAGGTTCCCTTTAGTCAAGTGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR GCA 90 bp CATCTCTTGACCAGAAGTCTTTCATCAAGCAGCAGCGAGGGGGTCTaGAGAGAGGAAGGTGCTCTTCTGAGGATCATCTTTGGGAAAGGG +
Preference number: 1 (lower is better)
Translates to: HLLTRSLSSSSSEGV*REEGALLRIIFGKG
Trigger: CCCTTTCCCAAAGATGATCCTCAGAAGAGCACCTTCCTCTCTGCAGACCCCCTCGCTGCTGCTTGATGAAAGACTTCTGGTCAAGAGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR GCA 90 bp AGGTCAAGGGTTTGGGATTCTGAGAAGCCCATCCTGGGGTGGGACTaGTTTGACGGGTCATCAGCAAAGCACTCACCAAAACCACAGATA +
Preference number: 1 (lower is better)
Translates to: RSRVWDSEKPILGWD*FDGSSAKHSPKPQI
Trigger: TATCTGTGGTTTTGGTGAGTGCTTTGCTGATGACCCGTCAAAGCAGTCCCACCCCAGGATGGGCTTCTCAGAATCCCAAACCCTTGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR CCA 90 bp CGCTTCACTCTGTACACAGAAGCCTCATACTTCTGTGCACAGAACTaGGGAGTCAAAGTGAGGGGCTGGACAATGTCTGGCTCTCTGCAA +
Preference number: 1 (lower is better)
Translates to: RFTLYTEASYFCAQN*GVKVRGWTMSGSLQ
Trigger: TTGCAGAGAGCCAGACATTGTCCAGCCCCTCACTTTGACTCCCCAGTTCTGTGCACAGAAGTATGAGGCTTCTGTGTACAGAGTGAAGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR CCA 90 bp AGTTTTCCTGGAGTTTTGGATCAAGATGAGGCTAGAAAGATTAATTaGAGCCAGCTCCCAGAGGGCACTGCACACTGCGCTGAGGAGCTT +
Preference number: 1 (lower is better)
Translates to: SFPGVLDQDEARKIN*SQLPEGTAHCAEEL
Trigger: AAGCTCCTCAGCGCAGTGTGCAGTGCCCTCTGGGAGCTGGCTCCAATTAATCTTTCTAGCCTCATCTTGATCCAAAACTCCAGGAAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR CCA 90 bp GTCTCAAATGTCCCTCTGCCTTTCTCTTGTAAGGACACTTGCCATTaGGTTTATGGGCCACCCAGCTCACCCAGGATGATCACTTCTCAA +
Preference number: 1 (lower is better)
Translates to: VSNVPLPFSCKDTCH*VYGPPSSPRMITSQ
Trigger: TTGAGAAGTGATCATCCTGGGTGAGCTGGGTGGCCCATAAACCCAATGGCAAGTGTCCTTACAAGAGAAAGGCAGAGGGACATTTGAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR CCA 90 bp AAGTTTCTTGTGAAGCCGGACTCACTTTTTGAGATCAGATTGACTTaGAAGGAAGGGACAGTGGGCTTCTCCAATAGAGCCTGCTTGGAG +
Preference number: 1 (lower is better)
Translates to: KFLVKPDSLFEIRLT*KEGTVGFSNRACLE
Trigger: CTCCAAGCAGGCTCTATTGGAGAAGCCCACTGTCCCTTCCTTCCAAGTCAATCTGATCTCAAAAAGTGAGTCCGGCTTCACAAGAAACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR TCA 90 bp AAGATCAGGAGATTTTATTTAAAAGCTCAGATGTTCAATTTCTCATaGGAAATCAGAAGATCTGGTGTCTCTGGGCCCACATTCTGCCTG +
Preference number: 1 (lower is better)
Translates to: KIRRFYLKAQMFNFS*EIRRSGVSGPTFCL
Trigger: CAGGCAGAATGTGGGCCCAGAGACACCAGATCTTCTGATTTCTCATGAGAAATTGAACATCTGAGCTTTTAAATAAAATCTCCTGATCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR GCA 90 bp AGGCTAGGGCAGATGGGGCGGAACAGGGCACCTCTCTGGCCGGTGCCCGGGAGTCACCCTCGGGGAGGCTaGCGCTTTCCCTGGGTGAGG +
Preference number: 2 (lower is better)
Translates to: RLGQMGRNRAPLWPVPGSHPRGG*RFPWVR
Trigger: CCTCACCCAGGGAAAGCGGCAGCCTCCCCGAGGGTG...ACTCCCGGGCACCGGCCAGAGAGGTGCCCTGTTCCGCCCCATCTGCCCTAGCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR GCA 90 bp AGGCTAGGGCAGATGGGGCGGAACAGGGCACCTCTCTGGCCGGTGCCCGGGAGTCAATGCTCCCCTCCCTaGATCGGGACCAGGAGGCGG +
Preference number: 2 (lower is better)
Translates to: RLGQMGRNRAPLWPVPGSQCSPP*IGTRRR
Trigger: CCGCCTCCTGGTCCCGATGCAGGGAGGGGAGCATTG...ACTCCCGGGCACCGGCCAGAGAGGTGCCCTGTTCCGCCCCATCTGCCCTAGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR CAA 90 bp CCAAACAGGGAATCTGGGCCTGCCCACTGGGGCAGGCTCCCGGGCTaGGGAGGGACAGAAGCGTGGGAGGCTGGCAATGCTCCCCTCCCT +
Preference number: 2 (lower is better)
Translates to: PNRESGPAHWGRLPG*GGTEAWEAGNAPLP
Trigger: AGGGAGGGGAGCATTGCCAGCCTCCCACGCTTCTGTCCCTCCCAAGCCCGGGAGCCTGCCCCAGTGGGCAGGCCCAGATTCCCTGTTTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR GCA 90 bp AGGCTAGGGCAGATGGGGCGGAACAGGGCACCTCTCTGGCCGGTGCCCGGGAGTAGGGCACCAGGCAGATaGTGGCAGCACCCGGGAAAC +
Preference number: 2 (lower is better)
Translates to: RLGQMGRNRAPLWPVPGSRAPGR*WQHPGN
Trigger: GTTTCCCGGGTGCTGCCAGCATCTGCCTGGTGCCCT...ACTCCCGGGCACCGGCCAGAGAGGTGCCCTGTTCCGCCCCATCTGCCCTAGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR CCA 90 bp AGGCTAGGGCAGATGGGGCGGAACAGGGCACCTCTCTGGCCGGTGCCCGGGAGTCCAGGTTGTACCCTGTaGAGCCTCAGGCCAAAGGCC +
Preference number: 2 (lower is better)
Translates to: RLGQMGRNRAPLWPVPGSPGCTL*SLRPKA
Trigger: GGCCTTTGGCCTGAGGCTCCACAGGGTACAACCTGG...ACTCCCGGGCACCGGCCAGAGAGGTGCCCTGTTCCGCCCCATCTGCCCTAGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR CCA 90 bp AGGCTAGGGCAGATGGGGCGGAACAGGGCACCTCTCTGGCCGGTGCCCGGGAGTACCCCACAGCTGTCCTaGAGAGGTCCAGACCATCCC +
Preference number: 2 (lower is better)
Translates to: RLGQMGRNRAPLWPVPGSTPQLS*RGPDHP
Trigger: GGGATGGTCTGGACCTCTCCAGGACAGCTGTGGGGT...ACTCCCGGGCACCGGCCAGAGAGGTGCCCTGTTCCGCCCCATCTGCCCTAGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR CCA 90 bp GACAGAAGCGTGGGAGGCTGGCAATGCTCCCCTCCCTGCATCGGGACCAGGAGGTGGCTGGCTGCACTGTaGGTCACAGCAGGATGGGGG +
Preference number: 2 (lower is better)
Translates to: DRSVGGWQCSPPCIGTRRWLAAL*VTAGWG
Trigger: CCCCCATCCTGCTGTGACCCACAGTGCAGCCAGCCA...CCTCCTGGTCCCGATGCAGGGAGGGGAGCATTGCCAGCCTCCCACGCTTCTGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR CCA 90 bp GACAGAAGCGTGGGAGGCTGGCAATGCTCCCCTCCCTGCATCGGGACCAGGAGGTTTGGGAAAGGGCGCTaGCCTGGGCATGCAAGGAGC +
Preference number: 2 (lower is better)
Translates to: DRSVGGWQCSPPCIGTRRFGKGR*PGHARS
Trigger: GCTCCTTGCATGCCCAGGCCAGCGCCCTTTCCCAAA...CCTCCTGGTCCCGATGCAGGGAGGGGAGCATTGCCAGCCTCCCACGCTTCTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR GCA 90 bp GACAGAAGCGTGGGAGGCTGGCAATGCTCCCCTCCCTGCATCGGGACCAGGAGGGAGGGCACTGCACACTaGGCTGAGGAGCTTTGGCTA +
Preference number: 2 (lower is better)
Translates to: DRSVGGWQCSPPCIGTRREGTAH*AEELWL
Trigger: TAGCCAAAGCTCCTCAGCGCAGTGTGCAGTGCCCTC...CCTCCTGGTCCCGATGCAGGGAGGGGAGCATTGCCAGCCTCCCACGCTTCTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR GCA 90 bp GACAGAAGCGTGGGAGGCTGGCAATGCTCCCCTCCCTGCATCGGGACCAGGAGGTTCCACCAAGACTCCTaGCTCAGAGGGTGGGGACAC +
Preference number: 2 (lower is better)
Translates to: DRSVGGWQCSPPCIGTRRFHQDS*LRGWGH
Trigger: GTGTCCCCACCCTCTGAGGCAGGAGTCTTGGTGGAA...CCTCCTGGTCCCGATGCAGGGAGGGGAGCATTGCCAGCCTCCCACGCTTCTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR CAA 90 bp TGGAGTGGAGGACAGCTGCCCTTCCAGCGGGGCCCATCCAGGTGTTaGACCCAGGTGCTATACCCGCCAGTCCCTGACAGCAGTTGGCTT +
Preference number: 2 (lower is better)
Translates to: WSGGQLPFQRGPSRC*TQVLYPPVPDSSWL
Trigger: AAGCCAACTGCTGTCAGGGACTGGCGGGTATAGCACCTGGGTCAAACACCTGGATGGGCCCCGCTGGAAGGGCAGCTGTCCTCCACTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR TCA 90 bp GCAGGCGCAACAGCTCCAAGGCTCAGAGGGAGAGAAGGGAGGACCCTGAAAACACCAACGTGGGTGCCCTaGAGAGGGGCCACCAAGACG +
Preference number: 2 (lower is better)
Translates to: AGATAPRLRGREGRTLKTPTWVP*RGATKT
Trigger: CGTCTTGGTGGCCCCTCTTCAGGGCACCCACGTTGG...TGTTTTCAGGGTCCTCCCTTCTCTCCCTCTGAGCCTTGGAGCTGTTGCGCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR TCA 90 bp AATGACAACCGGCCCATCTTTCTGCAGAGCAGCTATGAGGCCAGCGTCCCTGAGGGGATCCTGGCCAGCTaGCTGGGACAGGAGCTGGGC +
Preference number: 2 (lower is better)
Translates to: NDNRPIFLQSSYEASVPEGILAS*LGQELG
Trigger: GCCCAGCTCCTGTCCCAGTCAGCTGGCCAGGATCCC...CTCAGGGACGCTGGCCTCATAGCTGCTCTGCAGAAAGATGGGCCGGTTGTCATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR GCA 90 bp CCACAGATAGCATCCCTAGTGTGGGCAGGACTTGGGACCCCACAGCTGTCCTGGAGAGCCCCGAGGTTTTaGCCCAGCACTGGGCCAGCA +
Preference number: 2 (lower is better)
Translates to: PQIASLVWAGLGTPQLSWRAPRF*PSTGPA
Trigger: TGCTGGCCCAGTGCTGGGGCAAAACCTCGGGGCTCT...CCAGGACAGCTGTGGGGTCCCAAGTCCTGCCCACACTAGGGATGCTATCTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR CCA 90 bp AGGCTAGGGCAGATGGGGCGGAACAGGGCACCTCTCTGGCCGGTGCCCGGGAGTGAGAGGTCAAGGGTTTaGGATTCTGAGAAGCCCATC +
Preference number: 2 (lower is better)
Translates to: RLGQMGRNRAPLWPVPGSERSRV*DSEKPI
Trigger: GATGGGCTTCTCAGAATCCCAAACCCTTGACCTCTC...ACTCCCGGGCACCGGCCAGAGAGGTGCCCTGTTCCGCCCCATCTGCCCTAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR CCA 90 bp GCAGGCGCAACAGCTCCAAGGCTCAGAGGGAGAGAAGGGAGGACCCTGAAAACATCCTGCCTCAGAGGGTaGGGACACACCCAGGCTGGG +
Preference number: 2 (lower is better)
Translates to: AGATAPRLRGREGRTLKTSCLRG*GHTQAG
Trigger: CCCAGCCTGGGTGTGTCCCCACCCTCTGAGGCAGGA...TGTTTTCAGGGTCCTCCCTTCTCTCCCTCTGAGCCTTGGAGCTGTTGCGCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR TCA 90 bp GCAGGCGCAACAGCTCCAAGGCTCAGAGGGAGAGAAGGGAGGACCCTGAAAACAGGTGTGGAGCTGCTGTaGGCTGTCCTCCTCCGAGTC +
Preference number: 2 (lower is better)
Translates to: AGATAPRLRGREGRTLKTGVELL*AVLLRV
Trigger: GACTCGGAGGAGGACAGCTCACAGCAGCTCCACACC...TGTTTTCAGGGTCCTCCCTTCTCTCCCTCTGAGCCTTGGAGCTGTTGCGCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR GCA 90 bp CCTGAAAACAATTTGGGTGTGCACCCACACCTCTGCCCAGAGGCCTCAGTTGCTCACCCTCGGGGAGGCTaGCGCTTTCCCTGGGTGAGG +
Preference number: 2 (lower is better)
Translates to: PENNLGVHPHLCPEASVAHPRGG*RFPWVR
Trigger: CCTCACCCAGGGAAAGCGGCAGCCTCCCCGAGGGTG...AGCAACTGAGGCCTCTGGGCAGAGGTGTGGGTGCACACCCAAATTGTTTTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR CCA 90 bp CCACAGATAGCATCCCTAGTGTGGGCAGGACTTGGGACCCCACAGCTGTCCTGGCTGGGCTTTGGCACCTaGAGGGCAAGGCTTCTGTGG +
Preference number: 2 (lower is better)
Translates to: PQIASLVWAGLGTPQLSWLGFGT*RARLLW
Trigger: CCACAGAAGCCTTGCCCTCCAGGTGCCAAAGCCCAG...CCAGGACAGCTGTGGGGTCCCAAGTCCTGCCCACACTAGGGATGCTATCTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR CCA 90 bp AGCAGGCGCAACAGCTCCAAGGCTCAGAGGGAGAGAAGGGAGGACCCTGAAAACGCCAGGACAGTGTCTTaGCCCCGGTGTAGGCTGAGC +
Preference number: 2 (lower is better)
Translates to: SRRNSSKAQRERREDPENARTVS*PRCRLS
Trigger: GCTCAGCCTACACCGGGGCCAAGACACTGTCCTGGC...GTTTTCAGGGTCCTCCCTTCTCTCCCTCTGAGCCTTGGAGCTGTTGCGCCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR CCA 90 bp GCAGGCGCAACAGCTCCAAGGCTCAGAGGGAGAGAAGGGAGGACCCTGAAAACAGGTGGGGCAGCTTTGTaGTGGGATCCTGGCCAGCTG +
Preference number: 2 (lower is better)
Translates to: AGATAPRLRGREGRTLKTGGAAL*WDPGQL
Trigger: CAGCTGGCCAGGATCCCACCACAAAGCTGCCCCACC...TGTTTTCAGGGTCCTCCCTTCTCTCCCTCTGAGCCTTGGAGCTGTTGCGCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR CCA 90 bp GACAGAAGCGTGGGAGGCTGGCAATGCTCCCCTCCCTGCATCGGGACCAGGAGGGGAAGGAAGGGACAGTaGGCTTCTCCAATAGAGCCT +
Preference number: 2 (lower is better)
Translates to: DRSVGGWQCSPPCIGTRRGRKGQ*ASPIEP
Trigger: AGGCTCTATTGGAGAAGCCCACTGTCCCTTCCTTCC...CCTCCTGGTCCCGATGCAGGGAGGGGAGCATTGCCAGCCTCCCACGCTTCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR CCA 90 bp AATGACAACCGGCCCATCTTTCTGCAGAGCAGCTATGAGGCCAGCGTCCCTGAGCCATCCCAGGGAGTGTaGGCCCCCAGGTTGCAGAGC +
Preference number: 2 (lower is better)
Translates to: NDNRPIFLQSSYEASVPEPSQGV*APRLQS
Trigger: GCTCTGCAACCTGGGGGCCCACACTCCCTGGGATGG...CTCAGGGACGCTGGCCTCATAGCTGCTCTGCAGAAAGATGGGCCGGTTGTCATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR TCA 90 bp CCACAGATAGCATCCCTAGTGTGGGCAGGACTTGGGACCCCACAGCTGTCCTGGGGCCAAAGGCCCAGATaGCCACGAGTGCACATCTCT +
Preference number: 2 (lower is better)
Translates to: PQIASLVWAGLGTPQLSWGQRPR*PRVHIS
Trigger: AGAGATGTGCACTCGTGGTCATCTGGGCCTTTGGCC...CCAGGACAGCTGTGGGGTCCCAAGTCCTGCCCACACTAGGGATGCTATCTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR TCA 90 bp GACAGAAGCGTGGGAGGCTGGCAATGCTCCCCTCCCTGCATCGGGACCAGGAGGTCATCTGAGGGAAGATaGGGCTCTGTGTTATGCCAG +
Preference number: 2 (lower is better)
Translates to: DRSVGGWQCSPPCIGTRRSSEGR*GSVLCQ
Trigger: CTGGCATAACACAGAGCCTCATCTTCCCTCAGATGA...CCTCCTGGTCCCGATGCAGGGAGGGGAGCATTGCCAGCCTCCCACGCTTCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR TCA 90 bp AGCAGGCGCAACAGCTCCAAGGCTCAGAGGGAGAGAAGGGAGGACCCTGAAAACCAGGGCCTCAGCTTGTaGGGACTTGGAGCATACCCC +
Preference number: 2 (lower is better)
Translates to: SRRNSSKAQRERREDPENQGLSL*GLGAYP
Trigger: GGGGTATGCTCCAAGTCCTCACAAGCTGAGGCCCTG...GTTTTCAGGGTCCTCCCTTCTCTCCCTCTGAGCCTTGGAGCTGTTGCGCCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR GCA 90 bp CCACAGATAGCATCCCTAGTGTGGGCAGGACTTGGGACCCCACAGCTGTCCTGGTTGGAGAGCCCTGTTTaGTCCTCCTCCCAGCTGGCA +
Preference number: 2 (lower is better)
Translates to: PQIASLVWAGLGTPQLSWLESPV*SSSQLA
Trigger: TGCCAGCTGGGAGGAGGAGCAAACAGGGCTCTCCAA...CCAGGACAGCTGTGGGGTCCCAAGTCCTGCCCACACTAGGGATGCTATCTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR CCA 90 bp GCAGGCGCAACAGCTCCAAGGCTCAGAGGGAGAGAAGGGAGGACCCTGAAAACATCCTCCGAGTCCAGGTaGCATCACCTCCAGCTGCTG +
Preference number: 2 (lower is better)
Translates to: AGATAPRLRGREGRTLKTSSESR*HHLQLL
Trigger: CAGCAGCTGGAGGTGATGCCACCTGGACTCGGAGGA...TGTTTTCAGGGTCCTCCCTTCTCTCCCTCTGAGCCTTGGAGCTGTTGCGCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR CCA 90 bp GCAGGCGCAACAGCTCCAAGGCTCAGAGGGAGAGAAGGGAGGACCCTGAAAACAAGTGTGGGCAGGACTTaGGACCCCACAGCTGTCCTG +
Preference number: 2 (lower is better)
Translates to: AGATAPRLRGREGRTLKTSVGRT*DPTAVL
Trigger: CAGGACAGCTGTGGGGTCCCAAGTCCTGCCCACACT...TGTTTTCAGGGTCCTCCCTTCTCTCCCTCTGAGCCTTGGAGCTGTTGCGCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR CCA 90 bp AGCAGGCGCAACAGCTCCAAGGCTCAGAGGGAGAGAAGGGAGGACCCTGAAAACGGGGCAGCTTTGTGGTaGGATCCTGGCCAGCTGACT +
Preference number: 2 (lower is better)
Translates to: SRRNSSKAQRERREDPENGAALW*DPGQLT
Trigger: AGTCAGCTGGCCAGGATCCCACCACAAAGCTGCCCC...GTTTTCAGGGTCCTCCCTTCTCTCCCTCTGAGCCTTGGAGCTGTTGCGCCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR CCA 90 bp CTTCATGGGGTTGCTGTGAGGACTGAATGGGTTAGAAGAATGGCTGGCACATGGGGTGGGGGCCCAGGGTaGGTCCGCTGCTCTGGAAGG +
Preference number: 2 (lower is better)
Translates to: LHGVAVRTEWVRRMAGTWGGGPG*VRCSGR
Trigger: CCTTCCAGAGCAGCGGACCCACCCTGGGCCCCCACC...CCATGTGCCAGCCATTCTTCTAACCCATTCAGTCCTCACAGCAACCCCATGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR TCA 90 bp GACAGAAGCGTGGGAGGCTGGCAATGCTCCCCTCCCTGCATCGGGACCAGGAGGAGGAAGGTGCTCTTCTaGGGATCATCTTTGGGAAAG +
Preference number: 2 (lower is better)
Translates to: DRSVGGWQCSPPCIGTRRRKVLF*GSSLGK
Trigger: CTTTCCCAAAGATGATCCTCAGAAGAGCACCTTCCT...CCTCCTGGTCCCGATGCAGGGAGGGGAGCATTGCCAGCCTCCCACGCTTCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR TCA 90 bp GGCCACGCTTCACTCTGTACACAGAAGCCTCATACTTCTGTGCACAGAACTGGGACCCGCCCTGGCCTCTaGAGGGAGCCTCCTCGATCA +
Preference number: 2 (lower is better)
Translates to: GHASLCTQKPHTSVHRTGTRPGL*REPPRS
Trigger: TGATCGAGGAGGCTCCCTTCAGAGGCCAGGGCGGGT...CCCAGTTCTGTGCACAGAAGTATGAGGCTTCTGTGTACAGAGTGAAGCGTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR TCA 90 bp AGCAGGCGCAACAGCTCCAAGGCTCAGAGGGAGAGAAGGGAGGACCCTGAAAACTGGGGAGCAGGGAGCTaGCTCCCAGAAACACAGAGA +
Preference number: 2 (lower is better)
Translates to: SRRNSSKAQRERREDPENWGAGS*LPETQR
Trigger: TCTCTGTGTTTCTGGGAGTCAGCTCCCTGCTCCCCA...GTTTTCAGGGTCCTCCCTTCTCTCCCTCTGAGCCTTGGAGCTGTTGCGCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR TCA 90 bp GCAGGCGCAACAGCTCCAAGGCTCAGAGGGAGAGAAGGGAGGACCCTGAAAACATGGGGAGCAGGGAGCTaGCTCCCAGAAACACAGAGA +
Preference number: 2 (lower is better)
Translates to: AGATAPRLRGREGRTLKTWGAGS*LPETQR
Trigger: TCTCTGTGTTTCTGGGAGTCAGCTCCCTGCTCCCCA...TGTTTTCAGGGTCCTCCCTTCTCTCCCTCTGAGCCTTGGAGCTGTTGCGCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR TCA 90 bp AGCAGGCGCAACAGCTCCAAGGCTCAGAGGGAGAGAAGGGAGGACCCTGAAAACTTCCGACTCGGAGGCTaGGCCAAACAGGGAATCTGG +
Preference number: 2 (lower is better)
Translates to: SRRNSSKAQRERREDPENFRLGG*AKQGIW
Trigger: CCAGATTCCCTGTTTGGCTCAGCCTCCGAGTCGGAA...GTTTTCAGGGTCCTCCCTTCTCTCCCTCTGAGCCTTGGAGCTGTTGCGCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR GCA 90 bp GACAGAAGCGTGGGAGGCTGGCAATGCTCCCCTCCCTGCATCGGGACCAGGAGGCTGCAGAGAGGAAGGTaGTCTTCTGAGGATCATCTT +
Preference number: 2 (lower is better)
Translates to: DRSVGGWQCSPPCIGTRRLQRGR*SSEDHL
Trigger: AAGATGATCCTCAGAAGAGCACCTTCCTCTCTGCAG...CCTCCTGGTCCCGATGCAGGGAGGGGAGCATTGCCAGCCTCCCACGCTTCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR GCA 90 bp AGCAGGCGCAACAGCTCCAAGGCTCAGAGGGAGAGAAGGGAGGACCCTGAAAACAGCAGCGAGGGGGTCTaGAGAGAGGAAGGTGCTCTT +
Preference number: 2 (lower is better)
Translates to: SRRNSSKAQRERREDPENSSEGV*REEGAL
Trigger: AAGAGCACCTTCCTCTCTGCAGACCCCCTCGCTGCT...GTTTTCAGGGTCCTCCCTTCTCTCCCTCTGAGCCTTGGAGCTGTTGCGCCTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR CCA 90 bp AATGACAACCGGCCCATCTTTCTGCAGAGCAGCTATGAGGCCAGCGTCCCTGAGCTGGGCTTTGGCACCTaGAGGGCAAGGCTTCTGTGG +
Preference number: 2 (lower is better)
Translates to: NDNRPIFLQSSYEASVPELGFGT*RARLLW
Trigger: CCACAGAAGCCTTGCCCTCCAGGTGCCAAAGCCCAG...CTCAGGGACGCTGGCCTCATAGCTGCTCTGCAGAAAGATGGGCCGGTTGTCATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR CCA 90 bp CCACAGATAGCATCCCTAGTGTGGGCAGGACTTGGGACCCCACAGCTGTCCTGGATCACCTCCAGCTGCTaGAAATGCCCTGCCTCTTGC +
Preference number: 2 (lower is better)
Translates to: PQIASLVWAGLGTPQLSWITSSC*KCPASC
Trigger: GCAAGAGGCAGGGCATTTCCAGCAGCTGGAGGTGAT...CCAGGACAGCTGTGGGGTCCCAAGTCCTGCCCACACTAGGGATGCTATCTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR CCA 90 bp AATGACAACCGGCCCATCTTTCTGCAGAGCAGCTATGAGGCCAGCGTCCCTGAGTCCCTGGGTGAGGTGTaGAGCTGCTGTGAGCTGTCC +
Preference number: 2 (lower is better)
Translates to: NDNRPIFLQSSYEASVPESLGEV*SCCELS
Trigger: GGACAGCTCACAGCAGCTCCACACCTCACCCAGGGA...CTCAGGGACGCTGGCCTCATAGCTGCTCTGCAGAAAGATGGGCCGGTTGTCATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR CCA 90 bp GACACACCCAGGCTGGGCCACGCTTCACTCTGTACACAGAAGCCTCATACTTCTGGCTGCCGCTTTCCCTaGGTGAGGTGTGGAGCTGCT +
Preference number: 2 (lower is better)
Translates to: DTPRLGHASLCTQKPHTSGCRFP*VRCGAA
Trigger: AGCAGCTCCACACCTCACCCAGGGAAAGCGGCAGCC...AGAAGTATGAGGCTTCTGTGTACAGAGTGAAGCGTGGCCCAGCCTGGGTGTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR CCA 90 bp AATGACAACCGGCCCATCTTTCTGCAGAGCAGCTATGAGGCCAGCGTCCCTGAGTTGGGGAGACGTGGCTaGCTGCACTGTGGGTCACAG +
Preference number: 2 (lower is better)
Translates to: NDNRPIFLQSSYEASVPELGRRG*LHCGSQ
Trigger: CTGTGACCCACAGTGCAGCCAGCCACGTCTCCCCAA...CTCAGGGACGCTGGCCTCATAGCTGCTCTGCAGAAAGATGGGCCGGTTGTCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR CCA 90 bp CCTGAAAACAATTTGGGTGTGCACCCACACCTCTGCCCAGAGGCCTCAGTTGCTCCAGAGCTCACTCCTTaGGGAGACGTGGCTGGCTGC +
Preference number: 2 (lower is better)
Translates to: PENNLGVHPHLCPEASVAPELTP*GDVAGC
Trigger: GCAGCCAGCCACGTCTCCCCAAGGAGTGAGCTCTGG...AGCAACTGAGGCCTCTGGGCAGAGGTGTGGGTGCACACCCAAATTGTTTTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR CAA 90 bp ACTAAAGGGAACCTTTGCCATTTGGCAACTTCTCCATGCTGGGCTTaGGCACCTGGAGGGCAAGGCTTCTGTGGCGAGCGAGGGTGCTGC +
Preference number: 2 (lower is better)
Translates to: TKGNLCHLATSPCWA*APGGQGFCGERGCC
Trigger: GCAGCACCCTCGCTCGCCACAGAAGCCTTGCCCTCCAGGTGCCAAAGCCCAGCATGGAGAAGTTGCCAAATGGCAAAGGTTCCCTTTAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR TCA 90 bp AGCAGCGAGGGGGTCTGCAGAGAGGAAGGTGCTCTTCTGAGGATCATCTTTGGGTGCAGCACCGGTCTCTaGAGCAGGAGGATCTACAGG +
Preference number: 2 (lower is better)
Translates to: SSEGVCREEGALLRIIFGCSTGL*SRRIYR
Trigger: CCTGTAGATCCTCCTGCTTCAGAGACCGGTGCTGCA...CCCAAAGATGATCCTCAGAAGAGCACCTTCCTCTCTGCAGACCCCCTCGCTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR TCA 90 bp GAAGGGCCTTTCAGAGTAGCGGGGAGAAAGAGACGTCACAATTTCCCGGAAAGGGGTGTGGAGCTGCTGTaGGCTGTCCTCCTCCGAGTC +
Preference number: 2 (lower is better)
Translates to: EGPFRVAGRKRRHNFPERGVELL*AVLLRV
Trigger: GACTCGGAGGAGGACAGCTCACAGCAGCTCCACACC...CCTTTCCGGGAAATTGTGACGTCTCTTTCTCCCCGCTACTCTGAAAGGCCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR TCA 90 bp AATGACAACCGGCCCATCTTTCTGCAGAGCAGCTATGAGGCCAGCGTCCCTGAGGAGCCCAGAAAGCCCTaGGGATTTGCGAGAGTGTGG +
Preference number: 2 (lower is better)
Translates to: NDNRPIFLQSSYEASVPEEPRKP*GFARVW
Trigger: CCACACTCTCGCAAATCCTCAGGGCTTTCTGGGCTC...CTCAGGGACGCTGGCCTCATAGCTGCTCTGCAGAAAGATGGGCCGGTTGTCATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR GCA 90 bp GAAGGGCCTTTCAGAGTAGCGGGGAGAAAGAGACGTCACAATTTCCCGGAAAGGAGAGCCCCGAGGTTTTaGCCCAGCACTGGGCCAGCA +
Preference number: 2 (lower is better)
Translates to: EGPFRVAGRKRRHNFPERRAPRF*PSTGPA
Trigger: TGCTGGCCCAGTGCTGGGGCAAAACCTCGGGGCTCT...CCTTTCCGGGAAATTGTGACGTCTCTTTCTCCCCGCTACTCTGAAAGGCCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR GCA 90 bp AATGACAACCGGCCCATCTTTCTGCAGAGCAGCTATGAGGCCAGCGTCCCTGAGGGCCACCAAGACGGCTaGCAAGACCATGCTTGGAGA +
Preference number: 2 (lower is better)
Translates to: NDNRPIFLQSSYEASVPEGHQDG*QDHAWR
Trigger: TCTCCAAGCATGGTCTTGGCAGCCGTCTTGGTGGCC...CTCAGGGACGCTGGCCTCATAGCTGCTCTGCAGAAAGATGGGCCGGTTGTCATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR GCA 90 bp AGGCTAGGGCAGATGGGGCGGAACAGGGCACCTCTCTGGCCGGTGCCCGGGAGTTTCTCCAATAGAGCCTaGTTGGAGAGAAATCTTTCT +
Preference number: 2 (lower is better)
Translates to: RLGQMGRNRAPLWPVPGSFSNRA*LERNLS
Trigger: AGAAAGATTTCTCTCCAAGCAGGCTCTATTGGAGAA...ACTCCCGGGCACCGGCCAGAGAGGTGCCCTGTTCCGCCCCATCTGCCCTAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR GCA 90 bp CTTCATGGGGTTGCTGTGAGGACTGAATGGGTTAGAAGAATGGCTGGCACATGGCAATGCTCCCCTCCCTaGATCGGGACCAGGAGGCGG +
Preference number: 2 (lower is better)
Translates to: LHGVAVRTEWVRRMAGTWQCSPP*IGTRRR
Trigger: CCGCCTCCTGGTCCCGATGCAGGGAGGGGAGCATTG...CCATGTGCCAGCCATTCTTCTAACCCATTCAGTCCTCACAGCAACCCCATGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR GCA 90 bp TGCTATACCCGCCAGTCCCTGACAGCAGTTGGCTTTTTGCTCTTAGTACCTGTACAGGGAATCTGGGCCTaGCCACTGGGGCAGGCTCCC +
Preference number: 2 (lower is better)
Translates to: CYTRQSLTAVGFLLLVPVQGIWA*PLGQAP
Trigger: GGGAGCCTGCCCCAGTGGGCAGGCCCAGATTCCCTG...TACAGGTACTAAGAGCAAAAAGCCAACTGCTGTCAGGGACTGGCGGGTATAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR CCA 90 bp AATGACAACCGGCCCATCTTTCTGCAGAGCAGCTATGAGGCCAGCGTCCCTGAGGTGTCCCAGACTGCTTaGGCCACTGTCTTCCTGCAG +
Preference number: 2 (lower is better)
Translates to: NDNRPIFLQSSYEASVPEVSQTA*ATVFLQ
Trigger: CTGCAGGAAGACAGTGGCCCAAGCAGTCTGGGACAC...CTCAGGGACGCTGGCCTCATAGCTGCTCTGCAGAAAGATGGGCCGGTTGTCATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR CCA 90 bp ACGAGTGCACATCTCTTGACCAGAAGTCTTTCATCAAGCAGCAGCGAGGGGGTCGAAAGGGCGCTGGCCTaGGCATGCAAGGAGCTTCGG +
Preference number: 2 (lower is better)
Translates to: TSAHLLTRSLSSSSSEGVERALA*ACKELR
Trigger: CCGAAGCTCCTTGCATGCCCAGGCCAGCGCCCTTTC...GACCCCCTCGCTGCTGCTTGATGAAAGACTTCTGGTCAAGAGATGTGCACTCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR CCA 90 bp GACACACCCAGGCTGGGCCACGCTTCACTCTGTACACAGAAGCCTCATACTTCTCTCCATGCTGGGCTTTaGCACCTGGAGGGCAAGGCT +
Preference number: 2 (lower is better)
Translates to: DTPRLGHASLCTQKPHTSLHAGL*HLEGKA
Trigger: AGCCTTGCCCTCCAGGTGCCAAAGCCCAGCATGGAG...AGAAGTATGAGGCTTCTGTGTACAGAGTGAAGCGTGGCCCAGCCTGGGTGTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR CCA 90 bp GACAGAAGCGTGGGAGGCTGGCAATGCTCCCCTCCCTGCATCGGGACCAGGAGGCCCACCCTTCAAATTTaGGACCTGACCAAAGTGTTT +
Preference number: 2 (lower is better)
Translates to: DRSVGGWQCSPPCIGTRRPTLQI*DLTKVF
Trigger: AAACACTTTGGTCAGGTCCCAAATTTGAAGGGTGGG...CCTCCTGGTCCCGATGCAGGGAGGGGAGCATTGCCAGCCTCCCACGCTTCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR CCA 90 bp CTTCATGGGGTTGCTGTGAGGACTGAATGGGTTAGAAGAATGGCTGGCACATGGGACTGGGACAGGAGCTaGGCAGCCCAGGTCCTCCCT +
Preference number: 2 (lower is better)
Translates to: LHGVAVRTEWVRRMAGTWDWDRS*AAQVLP
Trigger: AGGGAGGACCTGGGCTGCCCAGCTCCTGTCCCAGTC...CCATGTGCCAGCCATTCTTCTAACCCATTCAGTCCTCACAGCAACCCCATGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR CAA 90 bp TGGAGCCTCAGGCCAAAGGCCCAGATGACCACGAGTGCACATCTCTaGACCAGAAGTCTTTCATCAAGCAGCAGCGAGGGGGTCTGCAGA +
Preference number: 2 (lower is better)
Translates to: WSLRPKAQMTTSAHL*TRSLSSSSSEGVCR
Trigger: TCTGCAGACCCCCTCGCTGCTGCTTGATGAAAGACTTCTGGTCAAGAGATGTGCACTCGTGGTCATCTGGGCCTTTGGCCTGAGGCTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR TCA 90 bp GACACACCCAGGCTGGGCCACGCTTCACTCTGTACACAGAAGCCTCATACTTCTGGGGTGGGACTGCTTTaGCGGGTCATCAGCAAAGCA +
Preference number: 2 (lower is better)
Translates to: DTPRLGHASLCTQKPHTSGVGLL*RVISKA
Trigger: TGCTTTGCTGATGACCCGTCAAAGCAGTCCCACCCC...AGAAGTATGAGGCTTCTGTGTACAGAGTGAAGCGTGGCCCAGCCTGGGTGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR TCA 90 bp GCAGGCGCAACAGCTCCAAGGCTCAGAGGGAGAGAAGGGAGGACCCTGAAAACATTAACCCTCGCGTTGTaGGGAGAGGTCAAGGGTTTG +
Preference number: 2 (lower is better)
Translates to: AGATAPRLRGREGRTLKTLTLAL*GEVKGL
Trigger: CAAACCCTTGACCTCTCCTCACAACGCGAGGGTTAA...TGTTTTCAGGGTCCTCCCTTCTCTCCCTCTGAGCCTTGGAGCTGTTGCGCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR TCA 90 bp GACAGAAGCGTGGGAGGCTGGCAATGCTCCCCTCCCTGCATCGGGACCAGGAGGTTCAAATTTGGGACCTaGCCAAAGTGTTTAACCCTC +
Preference number: 2 (lower is better)
Translates to: DRSVGGWQCSPPCIGTRRFKFGT*PKCLTL
Trigger: GAGGGTTAAACACTTTGGTCAGGTCCCAAATTTGAA...CCTCCTGGTCCCGATGCAGGGAGGGGAGCATTGCCAGCCTCCCACGCTTCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR TCA 90 bp AATGACAACCGGCCCATCTTTCTGCAGAGCAGCTATGAGGCCAGCGTCCCTGAGACTGGGGAGTCAAAGTaGGGGGCTGGACAATGTCTG +
Preference number: 2 (lower is better)
Translates to: NDNRPIFLQSSYEASVPETGESK*GAGQCL
Trigger: CAGACATTGTCCAGCCCCTCACTTTGACTCCCCAGT...CTCAGGGACGCTGGCCTCATAGCTGCTCTGCAGAAAGATGGGCCGGTTGTCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR TCA 90 bp GCAGGCGCAACAGCTCCAAGGCTCAGAGGGAGAGAAGGGAGGACCCTGAAAACATGCAGCGTCTCAGGATaGCTTCTCCAAGGTCCTCTT +
Preference number: 2 (lower is better)
Translates to: AGATAPRLRGREGRTLKTCSVSG*LLQGPL
Trigger: AAGAGGACCTTGGAGAAGTCATCCTGAGACGCTGCA...TGTTTTCAGGGTCCTCCCTTCTCTCCCTCTGAGCCTTGGAGCTGTTGCGCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR TCA 90 bp CCTGAAAACAATTTGGGTGTGCACCCACACCTCTGCCCAGAGGCCTCAGTTGCTGAGCCCAGAAAGCCCTaGGGATTTGCGAGAGTGTGG +
Preference number: 2 (lower is better)
Translates to: PENNLGVHPHLCPEASVAEPRKP*GFARVW
Trigger: CCACACTCTCGCAAATCCTCAGGGCTTTCTGGGCTC...AGCAACTGAGGCCTCTGGGCAGAGGTGTGGGTGCACACCCAAATTGTTTTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR TCA 90 bp TGCTATACCCGCCAGTCCCTGACAGCAGTTGGCTTTTTGCTCTTAGTACCTGTAAGCCACACACGGCCCTaGGGGCACATGCTCAGTGGC +
Preference number: 2 (lower is better)
Translates to: CYTRQSLTAVGFLLLVPVSHTRP*GHMLSG
Trigger: GCCACTGAGCATGTGCCCTCAGGGCCGTGTGTGGCT...TACAGGTACTAAGAGCAAAAAGCCAACTGCTGTCAGGGACTGGCGGGTATAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR GCA 90 bp CTTCATGGGGTTGCTGTGAGGACTGAATGGGTTAGAAGAATGGCTGGCACATGGAGGGCACCAGGCAGATaGTGGCAGCACCCGGGAAAC +
Preference number: 2 (lower is better)
Translates to: LHGVAVRTEWVRRMAGTWRAPGR*WQHPGN
Trigger: GTTTCCCGGGTGCTGCCAGCATCTGCCTGGTGCCCT...CCATGTGCCAGCCATTCTTCTAACCCATTCAGTCCTCACAGCAACCCCATGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR GCA 90 bp GACACACCCAGGCTGGGCCACGCTTCACTCTGTACACAGAAGCCTCATACTTCTGGCCACCAAGACGGCTaGCAAGACCATGCTTGGAGA +
Preference number: 2 (lower is better)
Translates to: DTPRLGHASLCTQKPHTSGHQDG*QDHAWR
Trigger: TCTCCAAGCATGGTCTTGGCAGCCGTCTTGGTGGCC...AGAAGTATGAGGCTTCTGTGTACAGAGTGAAGCGTGGCCCAGCCTGGGTGTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR GCA 90 bp AATGACAACCGGCCCATCTTTCTGCAGAGCAGCTATGAGGCCAGCGTCCCTGAGCTGCTGGAAATGCCCTaGCTCTTGCCACTCTGTCAC +
Preference number: 2 (lower is better)
Translates to: NDNRPIFLQSSYEASVPELLEMP*LLPLCH
Trigger: GTGACAGAGTGGCAAGAGGCAGGGCATTTCCAGCAG...CTCAGGGACGCTGGCCTCATAGCTGCTCTGCAGAAAGATGGGCCGGTTGTCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR GCA 90 bp AATGACAACCGGCCCATCTTTCTGCAGAGCAGCTATGAGGCCAGCGTCCCTGAGTCCAGCTGCTGGAAATaGCCTGCCTCTTGCCACTCT +
Preference number: 2 (lower is better)
Translates to: NDNRPIFLQSSYEASVPESSCWK*PASCHS
Trigger: AGAGTGGCAAGAGGCAGGGCATTTCCAGCAGCTGGA...CTCAGGGACGCTGGCCTCATAGCTGCTCTGCAGAAAGATGGGCCGGTTGTCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR GCA 90 bp CTTCATGGGGTTGCTGTGAGGACTGAATGGGTTAGAAGAATGGCTGGCACATGGGGAGACGTGGCTGGCTaGACTGTGGGTCACAGCAGG +
Preference number: 2 (lower is better)
Translates to: LHGVAVRTEWVRRMAGTWGDVAG*TVGHSR
Trigger: CCTGCTGTGACCCACAGTGCAGCCAGCCACGTCTCC...CCATGTGCCAGCCATTCTTCTAACCCATTCAGTCCTCACAGCAACCCCATGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR CCA 90 bp AATGACAACCGGCCCATCTTTCTGCAGAGCAGCTATGAGGCCAGCGTCCCTGAGAGACCTAGGGGGATGTaGGGGCATGTTTGTGGACAC +
Preference number: 2 (lower is better)
Translates to: NDNRPIFLQSSYEASVPERPRGM*GHVCGH
Trigger: GTGTCCACAAACATGCCCCCACATCCCCCTAGGTCT...CTCAGGGACGCTGGCCTCATAGCTGCTCTGCAGAAAGATGGGCCGGTTGTCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR CCA 90 bp CTTCATGGGGTTGCTGTGAGGACTGAATGGGTTAGAAGAATGGCTGGCACATGGGCCAGGACAGTGTCTTaGCCCCGGTGTAGGCTGAGC +
Preference number: 2 (lower is better)
Translates to: LHGVAVRTEWVRRMAGTWARTVS*PRCRLS
Trigger: GCTCAGCCTACACCGGGGCCAAGACACTGTCCTGGC...CCATGTGCCAGCCATTCTTCTAACCCATTCAGTCCTCACAGCAACCCCATGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR CCA 90 bp CCTCTGCCCACCCTTCAAATTTGGGACCTGACCAAAGTGTTTAACCCTCGCGTTGGCTGCCGCTTTCCCTaGGTGAGGTGTGGAGCTGCT +
Preference number: 2 (lower is better)
Translates to: PLPTLQIWDLTKVFNPRVGCRFP*VRCGAA
Trigger: AGCAGCTCCACACCTCACCCAGGGAAAGCGGCAGCC...AACGCGAGGGTTAAACACTTTGGTCAGGTCCCAAATTTGAAGGGTGGGCAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR CCA 90 bp AATGACAACCGGCCCATCTTTCTGCAGAGCAGCTATGAGGCCAGCGTCCCTGAGATAGCATCCCTAGTGTaGGCAGGACTTGGGACCCCA +
Preference number: 2 (lower is better)
Translates to: NDNRPIFLQSSYEASVPEIASLV*AGLGTP
Trigger: TGGGGTCCCAAGTCCTGCCCACACTAGGGATGCTAT...CTCAGGGACGCTGGCCTCATAGCTGCTCTGCAGAAAGATGGGCCGGTTGTCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR CCA 90 bp CCTGAAAACAATTTGGGTGTGCACCCACACCTCTGCCCAGAGGCCTCAGTTGCTTTTGTGGTGGGATCCTaGCCAGCTGACTGGGACAGG +
Preference number: 2 (lower is better)
Translates to: PENNLGVHPHLCPEASVAFVVGS*PADWDR
Trigger: CCTGTCCCAGTCAGCTGGCCAGGATCCCACCACAAA...AGCAACTGAGGCCTCTGGGCAGAGGTGTGGGTGCACACCCAAATTGTTTTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR CCA 90 bp AGCAGGCGCAACAGCTCCAAGGCTCAGAGGGAGAGAAGGGAGGACCCTGAAAACTTTGCGAGAGTGTGGTaGCTAGCTCCAGAAGGAGGA +
Preference number: 2 (lower is better)
Translates to: SRRNSSKAQRERREDPENFARVW*LAPEGG
Trigger: TCCTCCTTCTGGAGCTAGCCACCACACTCTCGCAAA...GTTTTCAGGGTCCTCCCTTCTCTCCCTCTGAGCCTTGGAGCTGTTGCGCCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR CCA 90 bp AATGACAACCGGCCCATCTTTCTGCAGAGCAGCTATGAGGCCAGCGTCCCTGAGCCGAGGCTCCCCTCTTaGGAAGTAAACAGGCACAAG +
Preference number: 2 (lower is better)
Translates to: NDNRPIFLQSSYEASVPEPRLPS*EVNRHK
Trigger: CTTGTGCCTGTTTACTTCCCAAGAGGGGAGCCTCGG...CTCAGGGACGCTGGCCTCATAGCTGCTCTGCAGAAAGATGGGCCGGTTGTCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR TCA 90 bp AGCAGGCGCAACAGCTCCAAGGCTCAGAGGGAGAGAAGGGAGGACCCTGAAAACTCATCTGAGGGAAGATaGGGCTCTGTGTTATGCCAG +
Preference number: 2 (lower is better)
Translates to: SRRNSSKAQRERREDPENSSEGR*GSVLCQ
Trigger: CTGGCATAACACAGAGCCTCATCTTCCCTCAGATGA...GTTTTCAGGGTCCTCCCTTCTCTCCCTCTGAGCCTTGGAGCTGTTGCGCCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR TCA 90 bp CTTCATGGGGTTGCTGTGAGGACTGAATGGGTTAGAAGAATGGCTGGCACATGGTGCCTGAAACCCAATTaGGAGCCCTCCCCCTCCTGG +
Preference number: 2 (lower is better)
Translates to: LHGVAVRTEWVRRMAGTWCLKPN*EPSPSW
Trigger: CCAGGAGGGGGAGGGCTCTCAATTGGGTTTCAGGCA...CCATGTGCCAGCCATTCTTCTAACCCATTCAGTCCTCACAGCAACCCCATGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR TCA 90 bp CTTCATGGGGTTGCTGTGAGGACTGAATGGGTTAGAAGAATGGCTGGCACATGGCCCTGGCCTGGTGCCTaGAACCCAATTGAGAGCCCT +
Preference number: 2 (lower is better)
Translates to: LHGVAVRTEWVRRMAGTWPWPGA*NPIESP
Trigger: AGGGCTCTCAATTGGGTTTCAGGCACCAGGCCAGGG...CCATGTGCCAGCCATTCTTCTAACCCATTCAGTCCTCACAGCAACCCCATGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR TCA 90 bp GAAGGGCCTTTCAGAGTAGCGGGGAGAAAGAGACGTCACAATTTCCCGGAAAGGTTCCGACTCGGAGGCTaGGCCAAACAGGGAATCTGG +
Preference number: 2 (lower is better)
Translates to: EGPFRVAGRKRRHNFPERFRLGG*AKQGIW
Trigger: CCAGATTCCCTGTTTGGCTCAGCCTCCGAGTCGGAA...CCTTTCCGGGAAATTGTGACGTCTCTTTCTCCCCGCTACTCTGAAAGGCCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR TCA 90 bp CCTGAAAACAATTTGGGTGTGCACCCACACCTCTGCCCAGAGGCCTCAGTTGCTGAGGGAGGCCCGGAGTaGATGAGTCTCTTTACCAAC +
Preference number: 2 (lower is better)
Translates to: PENNLGVHPHLCPEASVAEGGPE*MSLFTN
Trigger: GTTGGTAAAGAGACTCATTCACTCCGGGCCTCCCTC...AGCAACTGAGGCCTCTGGGCAGAGGTGTGGGTGCACACCCAAATTGTTTTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR GCA 90 bp GGCCACGCTTCACTCTGTACACAGAAGCCTCATACTTCTGTGCACAGAACTGGGCGGCTGCCAAGACCATaGTTGGAGAGCCCTGTTTGC +
Preference number: 2 (lower is better)
Translates to: GHASLCTQKPHTSVHRTGRLPRP*LESPVC
Trigger: GCAAACAGGGCTCTCCAAGCATGGTCTTGGCAGCCG...CCCAGTTCTGTGCACAGAAGTATGAGGCTTCTGTGTACAGAGTGAAGCGTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR GCA 90 bp GAAGGGCCTTTCAGAGTAGCGGGGAGAAAGAGACGTCACAATTTCCCGGAAAGGGGCATCACCTCCAGCTaGTGGAAATGCCCTGCCTCT +
Preference number: 2 (lower is better)
Translates to: EGPFRVAGRKRRHNFPERGITSS*WKCPAS
Trigger: AGAGGCAGGGCATTTCCAGCAGCTGGAGGTGATGCC...CCTTTCCGGGAAATTGTGACGTCTCTTTCTCCCCGCTACTCTGAAAGGCCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR GCA 90 bp CCTCTGCCCACCCTTCAAATTTGGGACCTGACCAAAGTGTTTAACCCTCGCGTTGGTGAGGTGTGGAGCTaGTGTGAGCTGTCCTCCTCC +
Preference number: 2 (lower is better)
Translates to: PLPTLQIWDLTKVFNPRVGEVWS*CELSSS
Trigger: GGAGGAGGACAGCTCACAGCAGCTCCACACCTCACC...AACGCGAGGGTTAAACACTTTGGTCAGGTCCCAAATTTGAAGGGTGGGCAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR GCA 90 bp GAAGGGCCTTTCAGAGTAGCGGGGAGAAAGAGACGTCACAATTTCCCGGAAAGGCCCAGGTCCTCCCTCTaGCCACCCTTCAAATTTGGG +
Preference number: 2 (lower is better)
Translates to: EGPFRVAGRKRRHNFPERPRSSL*PPFKFG
Trigger: CCCAAATTTGAAGGGTGGGCAGAGGGAGGACCTGGG...CCTTTCCGGGAAATTGTGACGTCTCTTTCTCCCCGCTACTCTGAAAGGCCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR GCA 90 bp CTTCATGGGGTTGCTGTGAGGACTGAATGGGTTAGAAGAATGGCTGGCACATGGTGTGGGCCCCCAGGTTaGAGAGCTGAGGATAGGGCT +
Preference number: 2 (lower is better)
Translates to: LHGVAVRTEWVRRMAGTWCGPPG*RAEDRA
Trigger: AGCCCTATCCTCAGCTCTGCAACCTGGGGGCCCACA...CCATGTGCCAGCCATTCTTCTAACCCATTCAGTCCTCACAGCAACCCCATGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR CCA 90 bp CCTGAAAACAATTTGGGTGTGCACCCACACCTCTGCCCAGAGGCCTCAGTTGCTAGACCTAGGGGGATGTaGGGGCATGTTTGTGGACAC +
Preference number: 2 (lower is better)
Translates to: PENNLGVHPHLCPEASVARPRGM*GHVCGH
Trigger: GTGTCCACAAACATGCCCCCACATCCCCCTAGGTCT...AGCAACTGAGGCCTCTGGGCAGAGGTGTGGGTGCACACCCAAATTGTTTTCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR CCA 90 bp CCTGAAAACAATTTGGGTGTGCACCCACACCTCTGCCCAGAGGCCTCAGTTGCTTCTGAGGATCATCTTTaGGAAAGGGCGCTGGCCTGG +
Preference number: 2 (lower is better)
Translates to: PENNLGVHPHLCPEASVASEDHL*ERALAW
Trigger: CCAGGCCAGCGCCCTTTCCCAAAGATGATCCTCAGA...AGCAACTGAGGCCTCTGGGCAGAGGTGTGGGTGCACACCCAAATTGTTTTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR CCA 90 bp GAAGGGCCTTTCAGAGTAGCGGGGAGAAAGAGACGTCACAATTTCCCGGAAAGGGCAACTTCTCCATGCTaGGCTTTGGCACCTGGAGGG +
Preference number: 2 (lower is better)
Translates to: EGPFRVAGRKRRHNFPERATSPC*ALAPGG
Trigger: CCCTCCAGGTGCCAAAGCCCAGCATGGAGAAGTTGC...CCTTTCCGGGAAATTGTGACGTCTCTTTCTCCCCGCTACTCTGAAAGGCCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR CCA 90 bp GGCCACGCTTCACTCTGTACACAGAAGCCTCATACTTCTGTGCACAGAACTGGGGCAACTTCTCCATGCTaGGCTTTGGCACCTGGAGGG +
Preference number: 2 (lower is better)
Translates to: GHASLCTQKPHTSVHRTGATSPC*ALAPGG
Trigger: CCCTCCAGGTGCCAAAGCCCAGCATGGAGAAGTTGC...CCCAGTTCTGTGCACAGAAGTATGAGGCTTCTGTGTACAGAGTGAAGCGTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR CCA 90 bp GAAGGGCCTTTCAGAGTAGCGGGGAGAAAGAGACGTCACAATTTCCCGGAAAGGCTGAGAAGCCCATCCTaGGGTGGGACTGCTTTGACG +
Preference number: 2 (lower is better)
Translates to: EGPFRVAGRKRRHNFPERLRSPS*GGTALT
Trigger: CGTCAAAGCAGTCCCACCCCAGGATGGGCTTCTCAG...CCTTTCCGGGAAATTGTGACGTCTCTTTCTCCCCGCTACTCTGAAAGGCCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR CCA 90 bp GAAGGGCCTTTCAGAGTAGCGGGGAGAAAGAGACGTCACAATTTCCCGGAAAGGTTTGGAGCTGGGGAGTaGCAAGCCAGAGCTCACTCC +
Preference number: 2 (lower is better)
Translates to: EGPFRVAGRKRRHNFPERFGAGE*QARAHS
Trigger: GGAGTGAGCTCTGGCTTGCCACTCCCCAGCTCCAAA...CCTTTCCGGGAAATTGTGACGTCTCTTTCTCCCCGCTACTCTGAAAGGCCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR CCA 90 bp AGCAGGCGCAACAGCTCCAAGGCTCAGAGGGAGAGAAGGGAGGACCCTGAAAACGAGATCAGATTGACTTaGAAGGAAGGGACAGTGGGC +
Preference number: 2 (lower is better)
Translates to: SRRNSSKAQRERREDPENEIRLT*KEGTVG
Trigger: GCCCACTGTCCCTTCCTTCCAAGTCAATCTGATCTC...GTTTTCAGGGTCCTCCCTTCTCTCCCTCTGAGCCTTGGAGCTGTTGCGCCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR CCA 90 bp AATGACAACCGGCCCATCTTTCTGCAGAGCAGCTATGAGGCCAGCGTCCCTGAGTTTGCGAGAGTGTGGTaGCTAGCTCCAGAAGGAGGA +
Preference number: 2 (lower is better)
Translates to: NDNRPIFLQSSYEASVPEFARVW*LAPEGG
Trigger: TCCTCCTTCTGGAGCTAGCCACCACACTCTCGCAAA...CTCAGGGACGCTGGCCTCATAGCTGCTCTGCAGAAAGATGGGCCGGTTGTCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR TCA 90 bp CCACAGATAGCATCCCTAGTGTGGGCAGGACTTGGGACCCCACAGCTGTCCTGGCGAGTGCACATCTCTTaGCCAGAAGTCTTTCATCAA +
Preference number: 2 (lower is better)
Translates to: PQIASLVWAGLGTPQLSWRVHIS*PEVFHQ
Trigger: TTGATGAAAGACTTCTGGTCAAGAGATGTGCACTCG...CCAGGACAGCTGTGGGGTCCCAAGTCCTGCCCACACTAGGGATGCTATCTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR TCA 90 bp AGCAGGCGCAACAGCTCCAAGGCTCAGAGGGAGAGAAGGGAGGACCCTGAAAACGCTGAGCATTTCACTTaGCTAAAGGGAACCTTTGCC +
Preference number: 2 (lower is better)
Translates to: SRRNSSKAQRERREDPENAEHFT*LKGTFA
Trigger: GGCAAAGGTTCCCTTTAGTCAAGTGAAATGCTCAGC...GTTTTCAGGGTCCTCCCTTCTCTCCCTCTGAGCCTTGGAGCTGTTGCGCCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR GCA 90 bp GGCCACGCTTCACTCTGTACACAGAAGCCTCATACTTCTGTGCACAGAACTGGGGTGTGTGTCCCAGACTaGTTGGGCCACTGTCTTCCT +
Preference number: 2 (lower is better)
Translates to: GHASLCTQKPHTSVHRTGVCVPD*LGHCLP
Trigger: AGGAAGACAGTGGCCCAAGCAGTCTGGGACACACAC...CCCAGTTCTGTGCACAGAAGTATGAGGCTTCTGTGTACAGAGTGAAGCGTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR GCA 90 bp GAAGGGCCTTTCAGAGTAGCGGGGAGAAAGAGACGTCACAATTTCCCGGAAAGGAAATGCCCTGCCTCTTaGCACTCTGTCACAGCACCC +
Preference number: 2 (lower is better)
Translates to: EGPFRVAGRKRRHNFPERKCPAS*HSVTAP
Trigger: GGGTGCTGTGACAGAGTGGCAAGAGGCAGGGCATTT...CCTTTCCGGGAAATTGTGACGTCTCTTTCTCCCCGCTACTCTGAAAGGCCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR GCA 90 bp CCTGAAAACAATTTGGGTGTGCACCCACACCTCTGCCCAGAGGCCTCAGTTGCTAAAGCCCTGAGGATTTaGGAGAGTGTGGTGGCTAGC +
Preference number: 2 (lower is better)
Translates to: PENNLGVHPHLCPEASVAKALRI*ESVVAS
Trigger: GCTAGCCACCACACTCTCGCAAATCCTCAGGGCTTT...AGCAACTGAGGCCTCTGGGCAGAGGTGTGGGTGCACACCCAAATTGTTTTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR GCA 90 bp CTTCATGGGGTTGCTGTGAGGACTGAATGGGTTAGAAGAATGGCTGGCACATGGAAGAAAGGGCTCCTTTaGCCAGGGAGCAGGCGCAAC +
Preference number: 2 (lower is better)
Translates to: LHGVAVRTEWVRRMAGTWKKGLL*PGSRRN
Trigger: GTTGCGCCTGCTCCCTGGGCAAAGGAGCCCTTTCTT...CCATGTGCCAGCCATTCTTCTAACCCATTCAGTCCTCACAGCAACCCCATGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR CCA 90 bp CCTCTGCCCACCCTTCAAATTTGGGACCTGACCAAAGTGTTTAACCCTCGCGTTGTGTCCCAGACTGCTTaGGCCACTGTCTTCCTGCAG +
Preference number: 2 (lower is better)
Translates to: PLPTLQIWDLTKVFNPRVVSQTA*ATVFLQ
Trigger: CTGCAGGAAGACAGTGGCCCAAGCAGTCTGGGACAC...AACGCGAGGGTTAAACACTTTGGTCAGGTCCCAAATTTGAAGGGTGGGCAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR CCA 90 bp GGCCACGCTTCACTCTGTACACAGAAGCCTCATACTTCTGTGCACAGAACTGGGTCTGAGGATCATCTTTaGGAAAGGGCGCTGGCCTGG +
Preference number: 2 (lower is better)
Translates to: GHASLCTQKPHTSVHRTGSEDHL*ERALAW
Trigger: CCAGGCCAGCGCCCTTTCCCAAAGATGATCCTCAGA...CCCAGTTCTGTGCACAGAAGTATGAGGCTTCTGTGTACAGAGTGAAGCGTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR CCA 90 bp GGCCACGCTTCACTCTGTACACAGAAGCCTCATACTTCTGTGCACAGAACTGGGGCTGCTTCTAGGAGGTaGTTACGAGCCCCAGGTTGT +
Preference number: 2 (lower is better)
Translates to: GHASLCTQKPHTSVHRTGAASRR*LRAPGC
Trigger: ACAACCTGGGGCTCGTAACCACCTCCTAGAAGCAGC...CCCAGTTCTGTGCACAGAAGTATGAGGCTTCTGTGTACAGAGTGAAGCGTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR TCA 90 bp ATGACCACGAGTGCACATCTCTTGACCAGAAGTCTTTCATCAAGCAGCAGCGAGTGCAGCACCGGTCTCTaGAGCAGGAGGATCTACAGG +
Preference number: 2 (lower is better)
Translates to: MTTSAHLLTRSLSSSSSECSTGL*SRRIYR
Trigger: CCTGTAGATCCTCCTGCTTCAGAGACCGGTGCTGCA...CTCGCTGCTGCTTGATGAAAGACTTCTGGTCAAGAGATGTGCACTCGTGGTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR TCA 90 bp CTTCATGGGGTTGCTGTGAGGACTGAATGGGTTAGAAGAATGGCTGGCACATGGCAATCCCTTCCTGATTaGTCCCAACGTGGGTGCCCT +
Preference number: 2 (lower is better)
Translates to: LHGVAVRTEWVRRMAGTWQSLPD*SQRGCP
Trigger: AGGGCACCCACGTTGGGATCAATCAGGAAGGGATTG...CCATGTGCCAGCCATTCTTCTAACCCATTCAGTCCTCACAGCAACCCCATGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR TCA 90 bp AATGACAACCGGCCCATCTTTCTGCAGAGCAGCTATGAGGCCAGCGTCCCTGAGCTTTCTAGAGTCATCTaGGGGAAGATGAGGCTCTGT +
Preference number: 2 (lower is better)
Translates to: NDNRPIFLQSSYEASVPELSRVI*GKMRLC
Trigger: ACAGAGCCTCATCTTCCCTCAGATGACTCTAGAAAG...CTCAGGGACGCTGGCCTCATAGCTGCTCTGCAGAAAGATGGGCCGGTTGTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR TCA 90 bp TGCTATACCCGCCAGTCCCTGACAGCAGTTGGCTTTTTGCTCTTAGTACCTGTATTCCCGGAAAGGAGTTaGGAAGAGAGCCAGGGCCCA +
Preference number: 2 (lower is better)
Translates to: CYTRQSLTAVGFLLLVPVFPERS*EESQGP
Trigger: TGGGCCCTGGCTCTCTTCTCAACTCCTTTCCGGGAA...TACAGGTACTAAGAGCAAAAAGCCAACTGCTGTCAGGGACTGGCGGGTATAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR GCA 90 bp TGCTATACCCGCCAGTCCCTGACAGCAGTTGGCTTTTTGCTCTTAGTACCTGTACGGCTGCCAAGACCATaGTTGGAGAGCCCTGTTTGC +
Preference number: 2 (lower is better)
Translates to: CYTRQSLTAVGFLLLVPVRLPRP*LESPVC
Trigger: GCAAACAGGGCTCTCCAAGCATGGTCTTGGCAGCCG...TACAGGTACTAAGAGCAAAAAGCCAACTGCTGTCAGGGACTGGCGGGTATAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR GCA 90 bp AATGACAACCGGCCCATCTTTCTGCAGAGCAGCTATGAGGCCAGCGTCCCTGAGAGCCTCATACTTCTGTaGACAGAACTGGGGAGTCAA +
Preference number: 2 (lower is better)
Translates to: NDNRPIFLQSSYEASVPESLILL*TELGSQ
Trigger: TTGACTCCCCAGTTCTGTGCACAGAAGTATGAGGCT...CTCAGGGACGCTGGCCTCATAGCTGCTCTGCAGAAAGATGGGCCGGTTGTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR GCA 90 bp TGCTATACCCGCCAGTCCCTGACAGCAGTTGGCTTTTTGCTCTTAGTACCTGTAATCCAGCCTAGGATTTaGAGGGAGGCCCCAGGGGAA +
Preference number: 2 (lower is better)
Translates to: CYTRQSLTAVGFLLLVPVIQPRI*REAPGE
Trigger: TTCCCCTGGGGCCTCCCTGCAAATCCTAGGCTGGAT...TACAGGTACTAAGAGCAAAAAGCCAACTGCTGTCAGGGACTGGCGGGTATAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR GCA 90 bp GAAGGGCCTTTCAGAGTAGCGGGGAGAAAGAGACGTCACAATTTCCCGGAAAGGAAAGCCCTGAGGATTTaGGAGAGTGTGGTGGCTAGC +
Preference number: 2 (lower is better)
Translates to: EGPFRVAGRKRRHNFPERKALRI*ESVVAS
Trigger: GCTAGCCACCACACTCTCGCAAATCCTCAGGGCTTT...CCTTTCCGGGAAATTGTGACGTCTCTTTCTCCCCGCTACTCTGAAAGGCCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR GCA 90 bp TGCTATACCCGCCAGTCCCTGACAGCAGTTGGCTTTTTGCTCTTAGTACCTGTAAAGAAAGGGCTCCTTTaGCCAGGGAGCAGGCGCAAC +
Preference number: 2 (lower is better)
Translates to: CYTRQSLTAVGFLLLVPVKKGLL*PGSRRN
Trigger: GTTGCGCCTGCTCCCTGGGCAAAGGAGCCCTTTCTT...TACAGGTACTAAGAGCAAAAAGCCAACTGCTGTCAGGGACTGGCGGGTATAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR GCA 90 bp GTTAGTGTTATTCCTAAGCTAAAAAGGAAGTCACCCCTTGCAAAGGCTAGGGCAGACTTGGCCTCCCCCTaGATATCTCCCGCCCCACCC +
Preference number: 2 (lower is better)
Translates to: VSVIPKLKRKSPLAKARADLASP*ISPAPP
Trigger: GGGTGGGGCGGGAGATATGCAGGGGGAGGCCAAGTC...TGCCCTAGCCTTTGCAAGGGGTGACTTCCTTTTTAGCTTAGGAATAACACTAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR CCA 90 bp CCTGAAAACAATTTGGGTGTGCACCCACACCTCTGCCCAGAGGCCTCAGTTGCTGAGAGGTCAAGGGTTTaGGATTCTGAGAAGCCCATC +
Preference number: 2 (lower is better)
Translates to: PENNLGVHPHLCPEASVAERSRV*DSEKPI
Trigger: GATGGGCTTCTCAGAATCCCAAACCCTTGACCTCTC...AGCAACTGAGGCCTCTGGGCAGAGGTGTGGGTGCACACCCAAATTGTTTTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR CCA 90 bp CTTCATGGGGTTGCTGTGAGGACTGAATGGGTTAGAAGAATGGCTGGCACATGGGGGCTGGACAATGTCTaGCTCTCTGCAAGCTCCCAA +
Preference number: 2 (lower is better)
Translates to: LHGVAVRTEWVRRMAGTWGLDNV*LSASSQ
Trigger: TTGGGAGCTTGCAGAGAGCCAGACATTGTCCAGCCC...CCATGTGCCAGCCATTCTTCTAACCCATTCAGTCCTCACAGCAACCCCATGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR TCA 90 bp CCTCTGCCCACCCTTCAAATTTGGGACCTGACCAAAGTGTTTAACCCTCGCGTTGGCCCCGGTGTAGGCTaGGCATTTCACTTGACTAAA +
Preference number: 2 (lower is better)
Translates to: PLPTLQIWDLTKVFNPRVGPGVG*AFHLTK
Trigger: TTTAGTCAAGTGAAATGCTCAGCCTACACCGGGGCC...AACGCGAGGGTTAAACACTTTGGTCAGGTCCCAAATTTGAAGGGTGGGCAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR TCA 90 bp TGCTATACCCGCCAGTCCCTGACAGCAGTTGGCTTTTTGCTCTTAGTACCTGTACAATCCCTTCCTGATTaGTCCCAACGTGGGTGCCCT +
Preference number: 2 (lower is better)
Translates to: CYTRQSLTAVGFLLLVPVQSLPD*SQRGCP
Trigger: AGGGCACCCACGTTGGGATCAATCAGGAAGGGATTG...TACAGGTACTAAGAGCAAAAAGCCAACTGCTGTCAGGGACTGGCGGGTATAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR TCA 90 bp GAAGGGCCTTTCAGAGTAGCGGGGAGAAAGAGACGTCACAATTTCCCGGAAAGGTCTTCAATCCCTTCCTaGTTGATCCCAACGTGGGTG +
Preference number: 2 (lower is better)
Translates to: EGPFRVAGRKRRHNFPERSSIPS*LIPTWV
Trigger: CACCCACGTTGGGATCAATCAGGAAGGGATTGAAGA...CCTTTCCGGGAAATTGTGACGTCTCTTTCTCCCCGCTACTCTGAAAGGCCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR TCA 90 bp GAAGGGCCTTTCAGAGTAGCGGGGAGAAAGAGACGTCACAATTTCCCGGAAAGGGAGGCCCGGAGTGAATaGGTCTCTTTACCAACTATG +
Preference number: 2 (lower is better)
Translates to: EGPFRVAGRKRRHNFPEREARSE*VSLPTM
Trigger: CATAGTTGGTAAAGAGACTCATTCACTCCGGGCCTC...CCTTTCCGGGAAATTGTGACGTCTCTTTCTCCCCGCTACTCTGAAAGGCCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR GCA 90 bp ATGACCACGAGTGCACATCTCTTGACCAGAAGTCTTTCATCAAGCAGCAGCGAGGTGTGTGTCCCAGACTaGTTGGGCCACTGTCTTCCT +
Preference number: 2 (lower is better)
Translates to: MTTSAHLLTRSLSSSSSEVCVPD*LGHCLP
Trigger: AGGAAGACAGTGGCCCAAGCAGTCTGGGACACACAC...CTCGCTGCTGCTTGATGAAAGACTTCTGGTCAAGAGATGTGCACTCGTGGTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR GCA 90 bp TGCTATACCCGCCAGTCCCTGACAGCAGTTGGCTTTTTGCTCTTAGTACCTGTACTGCTGGAAATGCCCTaGCTCTTGCCACTCTGTCAC +
Preference number: 2 (lower is better)
Translates to: CYTRQSLTAVGFLLLVPVLLEMP*LLPLCH
Trigger: GTGACAGAGTGGCAAGAGGCAGGGCATTTCCAGCAG...TACAGGTACTAAGAGCAAAAAGCCAACTGCTGTCAGGGACTGGCGGGTATAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR GCA 90 bp GTTAGTGTTATTCCTAAGCTAAAAAGGAAGTCACCCCTTGCAAAGGCTAGGGCAAAGGCCACAGCATCTTaGAGGCAGGTGGCCCGTGGC +
Preference number: 2 (lower is better)
Translates to: VSVIPKLKRKSPLAKARAKATAS*RQVARG
Trigger: GCCACGGGCCACCTGCCTGCAAGATGCTGTGGCCTT...TGCCCTAGCCTTTGCAAGGGGTGACTTCCTTTTTAGCTTAGGAATAACACTAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR GCA 90 bp TGCTATACCCGCCAGTCCCTGACAGCAGTTGGCTTTTTGCTCTTAGTACCTGTAACCGGCCCATCTTTCTaGAGAGCAGCTATGAGGCCA +
Preference number: 2 (lower is better)
Translates to: CYTRQSLTAVGFLLLVPVTGPSF*RAAMRP
Trigger: TGGCCTCATAGCTGCTCTGCAGAAAGATGGGCCGGT...TACAGGTACTAAGAGCAAAAAGCCAACTGCTGTCAGGGACTGGCGGGTATAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR TCA 90 bp GAAGGGCCTTTCAGAGTAGCGGGGAGAAAGAGACGTCACAATTTCCCGGAAAGGCTTTCTAGAGTCATCTaGGGGAAGATGAGGCTCTGT +
Preference number: 2 (lower is better)
Translates to: EGPFRVAGRKRRHNFPERLSRVI*GKMRLC
Trigger: ACAGAGCCTCATCTTCCCTCAGATGACTCTAGAAAG...CCTTTCCGGGAAATTGTGACGTCTCTTTCTCCCCGCTACTCTGAAAGGCCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR GCA 90 bp GTTAGTGTTATTCCTAAGCTAAAAAGGAAGTCACCCCTTGCAAAGGCTAGGGCAGGTGAGGTGTGGAGCTaGTGTGAGCTGTCCTCCTCC +
Preference number: 2 (lower is better)
Translates to: VSVIPKLKRKSPLAKARAGEVWS*CELSSS
Trigger: GGAGGAGGACAGCTCACAGCAGCTCCACACCTCACC...TGCCCTAGCCTTTGCAAGGGGTGACTTCCTTTTTAGCTTAGGAATAACACTAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR GCA 90 bp CCTGAAAACAATTTGGGTGTGCACCCACACCTCTGCCCAGAGGCCTCAGTTGCTGACAAAAAGGACCCATaGTGCCAAGAGAATGTTCCT +
Preference number: 2 (lower is better)
Translates to: PENNLGVHPHLCPEASVADKKDP*CQENVP
Trigger: AGGAACATTCTCTTGGCAGCATGGGTCCTTTTTGTC...AGCAACTGAGGCCTCTGGGCAGAGGTGTGGGTGCACACCCAAATTGTTTTCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR CCA 90 bp GTTAGTGTTATTCCTAAGCTAAAAAGGAAGTCACCCCTTGCAAAGGCTAGGGCATTTGGGAAAGGGCGCTaGCCTGGGCATGCAAGGAGC +
Preference number: 2 (lower is better)
Translates to: VSVIPKLKRKSPLAKARAFGKGR*PGHARS
Trigger: GCTCCTTGCATGCCCAGGCCAGCGCCCTTTCCCAAA...TGCCCTAGCCTTTGCAAGGGGTGACTTCCTTTTTAGCTTAGGAATAACACTAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR CCA 90 bp TGCTATACCCGCCAGTCCCTGACAGCAGTTGGCTTTTTGCTCTTAGTACCTGTATTCTGTGCACAGAACTaGGGAGTCAAAGTGAGGGGC +
Preference number: 2 (lower is better)
Translates to: CYTRQSLTAVGFLLLVPVFCAQN*GVKVRG
Trigger: GCCCCTCACTTTGACTCCCCAGTTCTGTGCACAGAA...TACAGGTACTAAGAGCAAAAAGCCAACTGCTGTCAGGGACTGGCGGGTATAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR CCA 90 bp CTTCATGGGGTTGCTGTGAGGACTGAATGGGTTAGAAGAATGGCTGGCACATGGTCTCTTTACCAACTATaGGGTTTCCGACTCGGAGGC +
Preference number: 2 (lower is better)
Translates to: LHGVAVRTEWVRRMAGTWSLYQL*GFRLGG
Trigger: GCCTCCGAGTCGGAAACCCCATAGTTGGTAAAGAGA...CCATGTGCCAGCCATTCTTCTAACCCATTCAGTCCTCACAGCAACCCCATGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR TCA 90 bp CTTCATGGGGTTGCTGTGAGGACTGAATGGGTTAGAAGAATGGCTGGCACATGGGCTGAGCATTTCACTTaGCTAAAGGGAACCTTTGCC +
Preference number: 2 (lower is better)
Translates to: LHGVAVRTEWVRRMAGTWAEHFT*LKGTFA
Trigger: GGCAAAGGTTCCCTTTAGTCAAGTGAAATGCTCAGC...CCATGTGCCAGCCATTCTTCTAACCCATTCAGTCCTCACAGCAACCCCATGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR TCA 90 bp GTTAGTGTTATTCCTAAGCTAAAAAGGAAGTCACCCCTTGCAAAGGCTAGGGCAGGGGTGGGACTGCTTTaGCGGGTCATCAGCAAAGCA +
Preference number: 2 (lower is better)
Translates to: VSVIPKLKRKSPLAKARAGVGLL*RVISKA
Trigger: TGCTTTGCTGATGACCCGTCAAAGCAGTCCCACCCC...TGCCCTAGCCTTTGCAAGGGGTGACTTCCTTTTTAGCTTAGGAATAACACTAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR GCA 90 bp GTTAGTGTTATTCCTAAGCTAAAAAGGAAGTCACCCCTTGCAAAGGCTAGGGCATTGGAGAGCCCTGTTTaGTCCTCCTCCCAGCTGGCA +
Preference number: 2 (lower is better)
Translates to: VSVIPKLKRKSPLAKARALESPV*SSSQLA
Trigger: TGCCAGCTGGGAGGAGGAGCAAACAGGGCTCTCCAA...TGCCCTAGCCTTTGCAAGGGGTGACTTCCTTTTTAGCTTAGGAATAACACTAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR GCA 90 bp GAAGGGCCTTTCAGAGTAGCGGGGAGAAAGAGACGTCACAATTTCCCGGAAAGGGACAAAAAGGACCCATaGTGCCAAGAGAATGTTCCT +
Preference number: 2 (lower is better)
Translates to: EGPFRVAGRKRRHNFPERDKKDP*CQENVP
Trigger: AGGAACATTCTCTTGGCAGCATGGGTCCTTTTTGTC...CCTTTCCGGGAAATTGTGACGTCTCTTTCTCCCCGCTACTCTGAAAGGCCCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR GCA 90 bp GTTAGTGTTATTCCTAAGCTAAAAAGGAAGTCACCCCTTGCAAAGGCTAGGGCAGGCCCAGAACAGAGCTaGTTTCACAGAGCCCTTGGC +
Preference number: 2 (lower is better)
Translates to: VSVIPKLKRKSPLAKARAGPEQS*FHRALG
Trigger: GCCAAGGGCTCTGTGAAAGCAGCTCTGTTCTGGGCC...TGCCCTAGCCTTTGCAAGGGGTGACTTCCTTTTTAGCTTAGGAATAACACTAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR CCA 90 bp GTTAGTGTTATTCCTAAGCTAAAAAGGAAGTCACCCCTTGCAAAGGCTAGGGCAAAGCCCATCCTGGGGTaGGACTGCTTTGACGGGTCA +
Preference number: 2 (lower is better)
Translates to: VSVIPKLKRKSPLAKARAKPILG*DCFDGS
Trigger: TGACCCGTCAAAGCAGTCCCACCCCAGGATGGGCTT...TGCCCTAGCCTTTGCAAGGGGTGACTTCCTTTTTAGCTTAGGAATAACACTAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR CCA 90 bp GTTAGTGTTATTCCTAAGCTAAAAAGGAAGTCACCCCTTGCAAAGGCTAGGGCACTGAGAAGCCCATCCTaGGGTGGGACTGCTTTGACG +
Preference number: 2 (lower is better)
Translates to: VSVIPKLKRKSPLAKARALRSPS*GGTALT
Trigger: CGTCAAAGCAGTCCCACCCCAGGATGGGCTTCTCAG...TGCCCTAGCCTTTGCAAGGGGTGACTTCCTTTTTAGCTTAGGAATAACACTAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR CCA 90 bp CCTGAAAACAATTTGGGTGTGCACCCACACCTCTGCCCAGAGGCCTCAGTTGCTCCAATAGAGCCTGCTTaGAGAGAAATCTTTCTAGAG +
Preference number: 2 (lower is better)
Translates to: PENNLGVHPHLCPEASVAPIEPA*REIFLE
Trigger: CTCTAGAAAGATTTCTCTCCAAGCAGGCTCTATTGG...AGCAACTGAGGCCTCTGGGCAGAGGTGTGGGTGCACACCCAAATTGTTTTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR GCA 90 bp GTTAGTGTTATTCCTAAGCTAAAAAGGAAGTCACCCCTTGCAAAGGCTAGGGCAAAGTCACAGGAAGTGTaGCCCTCTCTCAGGCAGCTG +
Preference number: 2 (lower is better)
Translates to: VSVIPKLKRKSPLAKARAKSQEV*PSLRQL
Trigger: CAGCTGCCTGAGAGAGGGGCACACTTCCTGTGACTT...TGCCCTAGCCTTTGCAAGGGGTGACTTCCTTTTTAGCTTAGGAATAACACTAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR CCA 90 bp GACACACCCAGGCTGGGCCACGCTTCACTCTGTACACAGAAGCCTCATACTTCTGTTTTCCTGGAGTTTTaGATCAAGATGAGGCTAGAA +
Preference number: 2 (lower is better)
Translates to: DTPRLGHASLCTQKPHTSVFLEF*IKMRLE
Trigger: TTCTAGCCTCATCTTGATCCAAAACTCCAGGAAAAC...AGAAGTATGAGGCTTCTGTGTACAGAGTGAAGCGTGGCCCAGCCTGGGTGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR CCA 90 bp GTTAGTGTTATTCCTAAGCTAAAAAGGAAGTCACCCCTTGCAAAGGCTAGGGCAGGGCTGGACAATGTCTaGCTCTCTGCAAGCTCCCAA +
Preference number: 2 (lower is better)
Translates to: VSVIPKLKRKSPLAKARAGLDNV*LSASSQ
Trigger: TTGGGAGCTTGCAGAGAGCCAGACATTGTCCAGCCC...TGCCCTAGCCTTTGCAAGGGGTGACTTCCTTTTTAGCTTAGGAATAACACTAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR CAA 90 bp CTTGGTAAGTTTCTTGTGAAGCCGGACTCACTTTTTGAGATCAGATaGACTTGGAAGGAAGGGACAGTGGGCTTCTCCAATAGAGCCTGC +
Preference number: 2 (lower is better)
Translates to: LGKFLVKPDSLFEIR*TWKEGTVGFSNRAC
Trigger: GCAGGCTCTATTGGAGAAGCCCACTGTCCCTTCCTTCCAAGTCAATCTGATCTCAAAAAGTGAGTCCGGCTTCACAAGAAACTTACCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR TCA 90 bp GTTAGTGTTATTCCTAAGCTAAAAAGGAAGTCACCCCTTGCAAAGGCTAGGGCAGGCCCCGGTGTAGGCTaGGCATTTCACTTGACTAAA +
Preference number: 2 (lower is better)
Translates to: VSVIPKLKRKSPLAKARAGPGVG*AFHLTK
Trigger: TTTAGTCAAGTGAAATGCTCAGCCTACACCGGGGCC...TGCCCTAGCCTTTGCAAGGGGTGACTTCCTTTTTAGCTTAGGAATAACACTAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR GCA 90 bp GTTAGTGTTATTCCTAAGCTAAAAAGGAAGTCACCCCTTGCAAAGGCTAGGGCATTGGCAACTTCTCCATaGTGGGCTTTGGCACCTGGA +
Preference number: 2 (lower is better)
Translates to: VSVIPKLKRKSPLAKARALATSP*WALAPG
Trigger: TCCAGGTGCCAAAGCCCAGCATGGAGAAGTTGCCAA...TGCCCTAGCCTTTGCAAGGGGTGACTTCCTTTTTAGCTTAGGAATAACACTAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR CCA 90 bp TGCTATACCCGCCAGTCCCTGACAGCAGTTGGCTTTTTGCTCTTAGTACCTGTACCCACCCTTCAAATTTaGGACCTGACCAAAGTGTTT +
Preference number: 2 (lower is better)
Translates to: CYTRQSLTAVGFLLLVPVPTLQI*DLTKVF
Trigger: AAACACTTTGGTCAGGTCCCAAATTTGAAGGGTGGG...TACAGGTACTAAGAGCAAAAAGCCAACTGCTGTCAGGGACTGGCGGGTATAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR CCA 90 bp GAAGGGCCTTTCAGAGTAGCGGGGAGAAAGAGACGTCACAATTTCCCGGAAAGGGTTTTCCTGGAGTTTTaGATCAAGATGAGGCTAGAA +
Preference number: 2 (lower is better)
Translates to: EGPFRVAGRKRRHNFPERVFLEF*IKMRLE
Trigger: TTCTAGCCTCATCTTGATCCAAAACTCCAGGAAAAC...CCTTTCCGGGAAATTGTGACGTCTCTTTCTCCCCGCTACTCTGAAAGGCCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR CCA 90 bp GTTAGTGTTATTCCTAAGCTAAAAAGGAAGTCACCCCTTGCAAAGGCTAGGGCAGGATTTGCGAGAGTGTaGTGGCTAGCTCCAGAAGGA +
Preference number: 2 (lower is better)
Translates to: VSVIPKLKRKSPLAKARAGFARV*WLAPEG
Trigger: TCCTTCTGGAGCTAGCCACCACACTCTCGCAAATCC...TGCCCTAGCCTTTGCAAGGGGTGACTTCCTTTTTAGCTTAGGAATAACACTAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR TCA 90 bp TGCTATACCCGCCAGTCCCTGACAGCAGTTGGCTTTTTGCTCTTAGTACCTGTATTGGTAAGTTTCTTGTaGAGCCGGACTCACTTTTTG +
Preference number: 2 (lower is better)
Translates to: CYTRQSLTAVGFLLLVPVLVSFL*SRTHFL
Trigger: CAAAAAGTGAGTCCGGCTTCACAAGAAACTTACCAA...TACAGGTACTAAGAGCAAAAAGCCAACTGCTGTCAGGGACTGGCGGGTATAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR GCA 90 bp TGCTATACCCGCCAGTCCCTGACAGCAGTTGGCTTTTTGCTCTTAGTACCTGTATCTCAAATGTCCCTCTaGCTTTCTCTTGTAAGGACA +
Preference number: 2 (lower is better)
Translates to: CYTRQSLTAVGFLLLVPVSQMSL*LSLVRT
Trigger: TGTCCTTACAAGAGAAAGGCAGAGGGACATTTGAGA...TACAGGTACTAAGAGCAAAAAGCCAACTGCTGTCAGGGACTGGCGGGTATAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR CAA 90 bp AAGCCACAGTTAGTGGGTGACAGGTCTTTCAGTTTTCCTGGAGTTTaGGATCAAGATGAGGCTAGAAAGATTAATTGGAGCCAGCTCCCA +
Preference number: 2 (lower is better)
Translates to: KPQLVGDRSFSFPGV*DQDEARKINWSQLP
Trigger: TGGGAGCTGGCTCCAATTAATCTTTCTAGCCTCATCTTGATCCAAAACTCCAGGAAAACTGAAAGACCTGTCACCCACTAACTGTGGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR GCA 90 bp TGCTATACCCGCCAGTCCCTGACAGCAGTTGGCTTTTTGCTCTTAGTACCTGTATTCTCCAATAGAGCCTaGTTGGAGAGAAATCTTTCT +
Preference number: 2 (lower is better)
Translates to: CYTRQSLTAVGFLLLVPVFSNRA*LERNLS
Trigger: AGAAAGATTTCTCTCCAAGCAGGCTCTATTGGAGAA...TACAGGTACTAAGAGCAAAAAGCCAACTGCTGTCAGGGACTGGCGGGTATAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR CCA 72 bp GGGCCCAGGGTGGGTCCGCTGCTCTGGAAGGTGCTGTaGGGAAAGGGGGACCCAGGCCCTCTCCCATCCCAG +
Preference number: 3 (lower is better)
Translates to: GPRVGPLLWKVL*GKGDPGPLPSQ
Trigger: CTGGGATGGGAGAGGGCCTGGGTCCCCCTTTCCCCACAGCACCTTCCAGAGCAGCGGACCCACCCTGGGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR CCA 72 bp GGGCACATGCTCAGTGGCACCAGAGGCGGAAGCAGGTaGGGGCCCAGGGTGGGTCCGCTGCTCTGGAAGGTG +
Preference number: 3 (lower is better)
Translates to: GHMLSGTRGGSR*GPRVGPLLWKV
Trigger: CACCTTCCAGAGCAGCGGACCCACCCTGGGCCCCCACCTGCTTCCGCCTCTGGTGCCACTGAGCATGTGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR CAA 90 bp AGGCTAGGGCAGATGGGGCGGAACAGGGCACCTCTCTGGCCGGTGCCCGGGAGTCTTGGAGAGCCCTGTTaGCTCCTCCTCCCAGCTGGC +
Preference number: 3 (lower is better)
Translates to: RLGQMGRNRAPLWPVPGSLGEPC*LLLPAG
Trigger: GCCAGCTGGGAGGAGGAGCAAACAGGGCTCTCCAAG...ACTCCCGGGCACCGGCCAGAGAGGTGCCCTGTTCCGCCCCATCTGCCCTAGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR GCA 72 bp GACAGAAGCGTGGGAGGCTGGCAATGCTCCCCTCCCTaGATCGGGACCAGGAGGCGGGCAGGAAAGGGCTGG +
Preference number: 3 (lower is better)
Translates to: DRSVGGWQCSPP*IGTRRRAGKGW
Trigger: CCAGCCCTTTCCTGCCCGCCTCCTGGTCCCGATGCAGGGAGGGGAGCATTGCCAGCCTCCCACGCTTCTGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR CCA 72 bp GCAGGATGGGGGTGGGGCAGCTTTGTGGTGGGATCCTaGCCAGCTGACTGGGACAGGAGCTGGGCAGCCCAG +
Preference number: 3 (lower is better)
Translates to: AGWGWGSFVVGS*PADWDRSWAAQ
Trigger: CTGGGCTGCCCAGCTCCTGTCCCAGTCAGCTGGCCAGGATCCCACCACAAAGCTGCCCCACCCCCATCCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR CCA 72 bp GAGGCTGAGCCAAACAGGGAATCTGGGCCTGCCCACTaGGGCAGGCTCCCGGGCTTGGGAGGGACAGAAGCG +
Preference number: 3 (lower is better)
Translates to: EAEPNRESGPAH*GRLPGLGGTEA
Trigger: CGCTTCTGTCCCTCCCAAGCCCGGGAGCCTGCCCCAGTGGGCAGGCCCAGATTCCCTGTTTGGCTCAGCCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR GCA 72 bp GAGGGAGGCAGCTGCTCCCACAGGGCACCAGGCAGATaGTGGCAGCACCCGGGAAACCCAAGGAAGAGAGCC +
Preference number: 3 (lower is better)
Translates to: EGGSCSHRAPGR*WQHPGNPRKRA
Trigger: GGCTCTCTTCCTTGGGTTTCCCGGGTGCTGCCAGCATCTGCCTGGTGCCCTGTGGGAGCAGCTGCCTCCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR GCA 72 bp CTGGAGAGGTCCAGACCATCCCACCCTCGGGGAGGCTaGCGCTTTCCCTGGGTGAGGTGTGGAGCTGCTGTG +
Preference number: 3 (lower is better)
Translates to: LERSRPSHPRGG*RFPWVRCGAAV
Trigger: CACAGCAGCTCCACACCTCACCCAGGGAAAGCGGCAGCCTCCCCGAGGGTGGGATGGTCTGGACCTCTCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR GCA 72 bp GGCAGATGGGGCGGAACAGGGCACCTCTCTGGCCGGTaGCCGGGAGTGTGCAAAGTCACAGGAAGTGTGCCC +
Preference number: 3 (lower is better)
Translates to: GRWGGTGHLSGR*PGVCKVTGSVP
Trigger: GGGCACACTTCCTGTGACTTTGCACACTCCCGGGCACCGGCCAGAGAGGTGCCCTGTTCCGCCCCATCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR CCA 72 bp TGGGCCCACATTCTGCCTGTCCGCTGTGGACTGGAGTaGAGGACAGCTGCCCTTCCAGCGGGGCCCATCCAG +
Preference number: 3 (lower is better)
Translates to: WAHILPVRCGLE*RTAALPAGPIQ
Trigger: CTGGATGGGCCCCGCTGGAAGGGCAGCTGTCCTCCACTCCAGTCCACAGCGGACAGGCAGAATGTGGGCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR CAA 90 bp GACAGAAGCGTGGGAGGCTGGCAATGCTCCCCTCCCTGCATCGGGACCAGGAGGTCTCCATGCTGGGCTTaGGCACCTGGAGGGCAAGGC +
Preference number: 3 (lower is better)
Translates to: DRSVGGWQCSPPCIGTRRSPCWA*APGGQG
Trigger: GCCTTGCCCTCCAGGTGCCAAAGCCCAGCATGGAGA...CCTCCTGGTCCCGATGCAGGGAGGGGAGCATTGCCAGCCTCCCACGCTTCTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR CCA 72 bp AGGCTAGGGCAGATGGGGCGGAACAGGGCACCTCTCTaGCCGGTGCCCGGGAGTGTGCAAAGTCACAGGAAG +
Preference number: 3 (lower is better)
Translates to: RLGQMGRNRAPL*PVPGSVQSHRK
Trigger: CTTCCTGTGACTTTGCACACTCCCGGGCACCGGCCAGAGAGGTGCCCTGTTCCGCCCCATCTGCCCTAGCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR CCA 72 bp CTGGTGTCTCTGGGCCCACATTCTGCCTGTCCGCTGTaGACTGGAGTGGAGGACAGCTGCCCTTCCAGCGGG +
Preference number: 3 (lower is better)
Translates to: LVSLGPHSACPL*TGVEDSCPSSG
Trigger: CCCGCTGGAAGGGCAGCTGTCCTCCACTCCAGTCCACAGCGGACAGGCAGAATGTGGGCCCAGAGACACCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR TCA 72 bp GACAGCTGCCCTTCCAGCGGGGCCCATCCAGGTGTTTaGCCCAGGTGCTATACCCGCCAGTCCCTGACAGCA +
Preference number: 3 (lower is better)
Translates to: DSCPSSGAHPGV*PRCYTRQSLTA
Trigger: TGCTGTCAGGGACTGGCGGGTATAGCACCTGGGTCAAACACCTGGATGGGCCCCGCTGGAAGGGCAGCTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR GCA 72 bp CACCCGGGAAACCCAAGGAAGAGAGCCCCGAGGTTTTaGCCCAGCACTGGGCCAGCACAGATGCCAGGACAG +
Preference number: 3 (lower is better)
Translates to: HPGNPRKRAPRF*PSTGPAQMPGQ
Trigger: CTGTCCTGGCATCTGTGCTGGCCCAGTGCTGGGGCAAAACCTCGGGGCTCTCTTCCTTGGGTTTCCCGGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR GCA 72 bp TCCAGGTGGCATCACCTCCAGCTGCTGGAAATGCCCTaGCTCTTGCCACTCTGTCACAGCACCCGCCCTGGC +
Preference number: 3 (lower is better)
Translates to: SRWHHLQLLEMP*LLPLCHSTRPG
Trigger: GCCAGGGCGGGTGCTGTGACAGAGTGGCAAGAGGCAGGGCATTTCCAGCAGCTGGAGGTGATGCCACCTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR GCA 72 bp GGAACAGGGCACCTCTCTGGCCGGTGCCCGGGAGTGTaGAAAGTCACAGGAAGTGTGCCCCTCTCTCAGGCA +
Preference number: 3 (lower is better)
Translates to: GTGHLSGRCPGV*KVTGSVPLSQA
Trigger: TGCCTGAGAGAGGGGCACACTTCCTGTGACTTTGCACACTCCCGGGCACCGGCCAGAGAGGTGCCCTGTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR CAA 90 bp GACAGAAGCGTGGGAGGCTGGCAATGCTCCCCTCCCTGCATCGGGACCAGGAGGTGTGTCCCAGACTGCTaGGGCCACTGTCTTCCTGCA +
Preference number: 3 (lower is better)
Translates to: DRSVGGWQCSPPCIGTRRCVPDC*GHCLPA
Trigger: TGCAGGAAGACAGTGGCCCAAGCAGTCTGGGACACA...CCTCCTGGTCCCGATGCAGGGAGGGGAGCATTGCCAGCCTCCCACGCTTCTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR CAA 90 bp GCAGGCGCAACAGCTCCAAGGCTCAGAGGGAGAGAAGGGAGGACCCTGAAAACAGAGAGCCCCGAGGTTTaGCCCCAGCACTGGGCCAGC +
Preference number: 3 (lower is better)
Translates to: AGATAPRLRGREGRTLKTESPEV*PQHWAS
Trigger: GCTGGCCCAGTGCTGGGGCAAAACCTCGGGGCTCTC...TGTTTTCAGGGTCCTCCCTTCTCTCCCTCTGAGCCTTGGAGCTGTTGCGCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR TCA 72 bp GCAGCGAGGGGGTCTGCAGAGAGGAAGGTGCTCTTCTaGGGATCATCTTTGGGAAAGGGCGCTGGCCTGGGC +
Preference number: 3 (lower is better)
Translates to: AARGSAERKVLF*GSSLGKGAGLG
Trigger: GCCCAGGCCAGCGCCCTTTCCCAAAGATGATCCTCAGAAGAGCACCTTCCTCTCTGCAGACCCCCTCGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR CCA 72 bp GCTTCTGTGGCGAGCGAGGGTGCTGCTTCTAGGAGGTaGTTACGAGCCCCAGGTTGTACCCTGTGGAGCCTC +
Preference number: 3 (lower is better)
Translates to: ASVASEGAASRR*LRAPGCTLWSL
Trigger: GAGGCTCCACAGGGTACAACCTGGGGCTCGTAACCACCTCCTAGAAGCAGCACCCTCGCTCGCCACAGAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR CCA 72 bp TATGCCAGCTTCCACCAAGACTCCTGCCTCAGAGGGTaGGGACACACCCAGGCTGGGCCACGCTTCACTCTG +
Preference number: 3 (lower is better)
Translates to: YASFHQDSCLRG*GHTQAGPRFTL
Trigger: CAGAGTGAAGCGTGGCCCAGCCTGGGTGTGTCCCCACCCTCTGAGGCAGGAGTCTTGGTGGAAGCTGGCATA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR CAA 90 bp AGCAGGCGCAACAGCTCCAAGGCTCAGAGGGAGAGAAGGGAGGACCCTGAAAACTCTCCATGCTGGGCTTaGGCACCTGGAGGGCAAGGC +
Preference number: 3 (lower is better)
Translates to: SRRNSSKAQRERREDPENSPCWA*APGGQG
Trigger: GCCTTGCCCTCCAGGTGCCAAAGCCCAGCATGGAGA...GTTTTCAGGGTCCTCCCTTCTCTCCCTCTGAGCCTTGGAGCTGTTGCGCCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR CAA 90 bp CCTGAAAACAATTTGGGTGTGCACCCACACCTCTGCCCAGAGGCCTCAGTTGCTGAGAGCCCCGAGGTTTaGCCCCAGCACTGGGCCAGC +
Preference number: 3 (lower is better)
Translates to: PENNLGVHPHLCPEASVAESPEV*PQHWAS
Trigger: GCTGGCCCAGTGCTGGGGCAAAACCTCGGGGCTCTC...AGCAACTGAGGCCTCTGGGCAGAGGTGTGGGTGCACACCCAAATTGTTTTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR GCA 72 bp GACCCTGAAAACAATTTGGGTGTGCACCCACACCTCTaGCCAGAGGCCTCAGTTGCTGGGTGGGGAGGGAGG +
Preference number: 3 (lower is better)
Translates to: DPENNLGVHPHL*PEASVAGWGGR
Trigger: CCTCCCTCCCCACCCAGCAACTGAGGCCTCTGGGCAGAGGTGTGGGTGCACACCCAAATTGTTTTCAGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR GCA 72 bp GCCGGTGCCCGGGAGTGTGCAAAGTCACAGGAAGTGTaGCCCTCTCTCAGGCAGCTGCTAACACCTGTCTTC +
Preference number: 3 (lower is better)
Translates to: AGARECAKSQEV*PSLRQLLTPVF
Trigger: GAAGACAGGTGTTAGCAGCTGCCTGAGAGAGGGGCACACTTCCTGTGACTTTGCACACTCCCGGGCACCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR CAA 90 bp GAAGGGCCTTTCAGAGTAGCGGGGAGAAAGAGACGTCACAATTTCCCGGAAAGGGGGGGTGGGGCAGCTTaGTGGTGGGATCCTGGCCAG +
Preference number: 3 (lower is better)
Translates to: EGPFRVAGRKRRHNFPERGGGAA*WWDPGQ
Trigger: CTGGCCAGGATCCCACCACAAAGCTGCCCCACCCCC...CCTTTCCGGGAAATTGTGACGTCTCTTTCTCCCCGCTACTCTGAAAGGCCCTTC
60% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR CAA 90 bp GACACACCCAGGCTGGGCCACGCTTCACTCTGTACACAGAAGCCTCATACTTCTGCCAGAGCTCACTCCTaGGGGAGACGTGGCTGGCTG +
Preference number: 3 (lower is better)
Translates to: DTPRLGHASLCTQKPHTSARAHS*GRRGWL
Trigger: CAGCCAGCCACGTCTCCCCAAGGAGTGAGCTCTGGC...AGAAGTATGAGGCTTCTGTGTACAGAGTGAAGCGTGGCCCAGCCTGGGTGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR CCA 72 bp TCTAGGAGGTGGTTACGAGCCCCAGGTTGTACCCTGTaGAGCCTCAGGCCAAAGGCCCAGATGACCACGAGT +
Preference number: 3 (lower is better)
Translates to: SRRWLRAPGCTL*SLRPKAQMTTS
Trigger: ACTCGTGGTCATCTGGGCCTTTGGCCTGAGGCTCCACAGGGTACAACCTGGGGCTCGTAACCACCTCCTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR CAA 90 bp GACACACCCAGGCTGGGCCACGCTTCACTCTGTACACAGAAGCCTCATACTTCTCTTGGAGAGCCCTGTTaGCTCCTCCTCCCAGCTGGC +
Preference number: 3 (lower is better)
Translates to: DTPRLGHASLCTQKPHTSLGEPC*LLLPAG
Trigger: GCCAGCTGGGAGGAGGAGCAAACAGGGCTCTCCAAG...AGAAGTATGAGGCTTCTGTGTACAGAGTGAAGCGTGGCCCAGCCTGGGTGTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR CAA 90 bp AGCAGGCGCAACAGCTCCAAGGCTCAGAGGGAGAGAAGGGAGGACCCTGAAAACGAAATGCCCTGCCTCTaGCCACTCTGTCACAGCACC +
Preference number: 3 (lower is better)
Translates to: SRRNSSKAQRERREDPENEMPCL*PLCHST
Trigger: GGTGCTGTGACAGAGTGGCAAGAGGCAGGGCATTTC...GTTTTCAGGGTCCTCCCTTCTCTCCCTCTGAGCCTTGGAGCTGTTGCGCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR CAA 90 bp GAAGGGCCTTTCAGAGTAGCGGGGAGAAAGAGACGTCACAATTTCCCGGAAAGGGCCAGAGCTCACTCCTaGGGGAGACGTGGCTGGCTG +
Preference number: 3 (lower is better)
Translates to: EGPFRVAGRKRRHNFPERARAHS*GRRGWL
Trigger: CAGCCAGCCACGTCTCCCCAAGGAGTGAGCTCTGGC...CCTTTCCGGGAAATTGTGACGTCTCTTTCTCCCCGCTACTCTGAAAGGCCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR CAA 90 bp AATGACAACCGGCCCATCTTTCTGCAGAGCAGCTATGAGGCCAGCGTCCCTGAGGCCGAGGCTCCCCTCTaGGGAAGTAAACAGGCACAA +
Preference number: 3 (lower is better)
Translates to: NDNRPIFLQSSYEASVPEAEAPL*GSKQAQ
Trigger: TTGTGCCTGTTTACTTCCCAAGAGGGGAGCCTCGGC...CTCAGGGACGCTGGCCTCATAGCTGCTCTGCAGAAAGATGGGCCGGTTGTCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR TCA 72 bp GGGAGCCTCCTCGATCATCTTCAATCCCTTCCTGATTaGTCCCAACGTGGGTGCCCTGAAGAGGGGCCACCA +
Preference number: 3 (lower is better)
Translates to: GSLLDHLQSLPD*SQRGCPEEGPP
Trigger: TGGTGGCCCCTCTTCAGGGCACCCACGTTGGGATCAATCAGGAAGGGATTGAAGATGATCGAGGAGGCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR TCA 72 bp TCTCTTTACCAACTATGGGGTTTCCGACTCGGAGGCTaGGCCAAACAGGGAATCTGGGCCTGCCCACTGGGG +
Preference number: 3 (lower is better)
Translates to: SLYQLWGFRLGG*AKQGIWACPLG
Trigger: CCCCAGTGGGCAGGCCCAGATTCCCTGTTTGGCTCAGCCTCCGAGTCGGAAACCCCATAGTTGGTAAAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR TCA 72 bp AGGCCTCAGTTGCTGGGTGGGGAGGGAGGCCCGGAGTaGATGAGTCTCTTTACCAACTATGGGGTTTCCGAC +
Preference number: 3 (lower is better)
Translates to: RPQLLGGEGGPE*MSLFTNYGVSD
Trigger: GTCGGAAACCCCATAGTTGGTAAAGAGACTCATTCACTCCGGGCCTCCCTCCCCACCCAGCAACTGAGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR CAA 90 bp GAAGGGCCTTTCAGAGTAGCGGGGAGAAAGAGACGTCACAATTTCCCGGAAAGGGTTACGAGCCCCAGGTaGTACCCTGTGGAGCCTCAG +
Preference number: 3 (lower is better)
Translates to: EGPFRVAGRKRRHNFPERVTSPR*YPVEPQ
Trigger: CTGAGGCTCCACAGGGTACAACCTGGGGCTCGTAAC...CCTTTCCGGGAAATTGTGACGTCTCTTTCTCCCCGCTACTCTGAAAGGCCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR GCA 72 bp ATCAAGCAGCAGCGAGGGGGTCTGCAGAGAGGAAGGTaGTCTTCTGAGGATCATCTTTGGGAAAGGGCGCTG +
Preference number: 3 (lower is better)
Translates to: IKQQRGGLQRGR*SSEDHLWERAL
Trigger: CAGCGCCCTTTCCCAAAGATGATCCTCAGAAGAGCACCTTCCTCTCTGCAGACCCCCTCGCTGCTGCTTGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR CCA 72 bp CTGCAGAGAGGAAGGTGCTCTTCTGAGGATCATCTTTaGGAAAGGGCGCTGGCCTGGGCATGCAAGGAGCTT +
Preference number: 3 (lower is better)
Translates to: LQRGRCSSEDHL*ERALAWACKEL
Trigger: AAGCTCCTTGCATGCCCAGGCCAGCGCCCTTTCCCAAAGATGATCCTCAGAAGAGCACCTTCCTCTCTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR CAA 90 bp AGCAGGCGCAACAGCTCCAAGGCTCAGAGGGAGAGAAGGGAGGACCCTGAAAACGCCCACCCTTCAAATTaGGGACCTGACCAAAGTGTT +
Preference number: 3 (lower is better)
Translates to: SRRNSSKAQRERREDPENAHPSN*GPDQSV
Trigger: AACACTTTGGTCAGGTCCCAAATTTGAAGGGTGGGC...GTTTTCAGGGTCCTCCCTTCTCTCCCTCTGAGCCTTGGAGCTGTTGCGCCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR CCA 72 bp AAAGGGAACCTTTGCCATTTGGCAACTTCTCCATGCTaGGCTTTGGCACCTGGAGGGCAAGGCTTCTGTGGC +
Preference number: 3 (lower is better)
Translates to: KGNLCHLATSPC*ALAPGGQGFCG
Trigger: GCCACAGAAGCCTTGCCCTCCAGGTGCCAAAGCCCAGCATGGAGAAGTTGCCAAATGGCAAAGGTTCCCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR CCA 72 bp AGAGGTCAAGGGTTTGGGATTCTGAGAAGCCCATCCTaGGGTGGGACTGCTTTGACGGGTCATCAGCAAAGC +
Preference number: 3 (lower is better)
Translates to: RGQGFGILRSPS*GGTALTGHQQS
Trigger: GCTTTGCTGATGACCCGTCAAAGCAGTCCCACCCCAGGATGGGCTTCTCAGAATCCCAAACCCTTGACCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR CCA 72 bp CTCCCAGAGGGCACTGCACACTGCGCTGAGGAGCTTTaGCTATATCCATTTGGCATTAGGGAGCCAGTGAAG +
Preference number: 3 (lower is better)
Translates to: LPEGTAHCAEEL*LYPFGIREPVK
Trigger: CTTCACTGGCTCCCTAATGCCAAATGGATATAGCCAAAGCTCCTCAGCGCAGTGTGCAGTGCCCTCTGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR CAA 90 bp CTTCATGGGGTTGCTGTGAGGACTGAATGGGTTAGAAGAATGGCTGGCACATGGTGGGGTGGGACTGCTTaGACGGGTCATCAGCAAAGC +
Preference number: 3 (lower is better)
Translates to: LHGVAVRTEWVRRMAGTWWGGTA*TGHQQS
Trigger: GCTTTGCTGATGACCCGTCAAAGCAGTCCCACCCCA...CCATGTGCCAGCCATTCTTCTAACCCATTCAGTCCTCACAGCAACCCCATGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR CAA 90 bp TGCTATACCCGCCAGTCCCTGACAGCAGTTGGCTTTTTGCTCTTAGTACCTGTAGTGCCTGAAACCCAATaGAGAGCCCTCCCCCTCCTG +
Preference number: 3 (lower is better)
Translates to: CYTRQSLTAVGFLLLVPVVPETQ*RALPLL
Trigger: CAGGAGGGGGAGGGCTCTCAATTGGGTTTCAGGCAC...TACAGGTACTAAGAGCAAAAAGCCAACTGCTGTCAGGGACTGGCGGGTATAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR CCA 72 bp TCAAGGGTTTGGGATTCTGAGAAGCCCATCCTGGGGTaGGACTGCTTTGACGGGTCATCAGCAAAGCACTCA +
Preference number: 3 (lower is better)
Translates to: SRVWDSEKPILG*DCFDGSSAKHS
Trigger: TGAGTGCTTTGCTGATGACCCGTCAAAGCAGTCCCACCCCAGGATGGGCTTCTCAGAATCCCAAACCCTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR CAA 90 bp AGCAGGCGCAACAGCTCCAAGGCTCAGAGGGAGAGAAGGGAGGACCCTGAAAACACGAGTGCACATCTCTaGACCAGAAGTCTTTCATCA +
Preference number: 3 (lower is better)
Translates to: SRRNSSKAQRERREDPENTSAHL*TRSLSS
Trigger: TGATGAAAGACTTCTGGTCAAGAGATGTGCACTCGT...GTTTTCAGGGTCCTCCCTTCTCTCCCTCTGAGCCTTGGAGCTGTTGCGCCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR CAA 90 bp TGCTATACCCGCCAGTCCCTGACAGCAGTTGGCTTTTTGCTCTTAGTACCTGTAGCCGAGGCTCCCCTCTaGGGAAGTAAACAGGCACAA +
Preference number: 3 (lower is better)
Translates to: CYTRQSLTAVGFLLLVPVAEAPL*GSKQAQ
Trigger: TTGTGCCTGTTTACTTCCCAAGAGGGGAGCCTCGGC...TACAGGTACTAAGAGCAAAAAGCCAACTGCTGTCAGGGACTGGCGGGTATAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR TCA 72 bp CAGATGCCAGGACAGTGTCTTGGCCCCGGTGTAGGCTaGGCATTTCACTTGACTAAAGGGAACCTTTGCCAT +
Preference number: 3 (lower is better)
Translates to: QMPGQCLGPGVG*AFHLTKGNLCH
Trigger: ATGGCAAAGGTTCCCTTTAGTCAAGTGAAATGCTCAGCCTACACCGGGGCCAAGACACTGTCCTGGCATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR GCA 72 bp ACTAAAGGGAACCTTTGCCATTTGGCAACTTCTCCATaGTGGGCTTTGGCACCTGGAGGGCAAGGCTTCTGT +
Preference number: 3 (lower is better)
Translates to: TKGNLCHLATSP*WALAPGGQGFC
Trigger: ACAGAAGCCTTGCCCTCCAGGTGCCAAAGCCCAGCATGGAGAAGTTGCCAAATGGCAAAGGTTCCCTTTAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR CCA 72 bp CTGTACACAGAAGCCTCATACTTCTGTGCACAGAACTaGGGAGTCAAAGTGAGGGGCTGGACAATGTCTGGC +
Preference number: 3 (lower is better)
Translates to: LYTEASYFCAQN*GVKVRGWTMSG
Trigger: GCCAGACATTGTCCAGCCCCTCACTTTGACTCCCCAGTTCTGTGCACAGAAGTATGAGGCTTCTGTGTACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR CAA 90 bp CTTCATGGGGTTGCTGTGAGGACTGAATGGGTTAGAAGAATGGCTGGCACATGGGGGAACCTTTGCCATTaGGCAACTTCTCCATGCTGG +
Preference number: 3 (lower is better)
Translates to: LHGVAVRTEWVRRMAGTWGNLCH*ATSPCW
Trigger: CCAGCATGGAGAAGTTGCCAAATGGCAAAGGTTCCC...CCATGTGCCAGCCATTCTTCTAACCCATTCAGTCCTCACAGCAACCCCATGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR GCA 72 bp ACCAGAAGTCTTTCATCAAGCAGCAGCGAGGGGGTCTaGAGAGAGGAAGGTGCTCTTCTGAGGATCATCTTT +
Preference number: 3 (lower is better)
Translates to: TRSLSSSSSEGV*REEGALLRIIF
Trigger: AAAGATGATCCTCAGAAGAGCACCTTCCTCTCTGCAGACCCCCTCGCTGCTGCTTGATGAAAGACTTCTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR CCA 72 bp GGAGTTTTGGATCAAGATGAGGCTAGAAAGATTAATTaGAGCCAGCTCCCAGAGGGCACTGCACACTGCGCT +
Preference number: 3 (lower is better)
Translates to: GVLDQDEARKIN*SQLPEGTAHCA
Trigger: AGCGCAGTGTGCAGTGCCCTCTGGGAGCTGGCTCCAATTAATCTTTCTAGCCTCATCTTGATCCAAAACTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR CAA 90 bp GTTAGTGTTATTCCTAAGCTAAAAAGGAAGTCACCCCTTGCAAAGGCTAGGGCATGTGTCCCAGACTGCTaGGGCCACTGTCTTCCTGCA +
Preference number: 3 (lower is better)
Translates to: VSVIPKLKRKSPLAKARACVPDC*GHCLPA
Trigger: TGCAGGAAGACAGTGGCCCAAGCAGTCTGGGACACA...TGCCCTAGCCTTTGCAAGGGGTGACTTCCTTTTTAGCTTAGGAATAACACTAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR CCA 72 bp GTGAAGCCGGACTCACTTTTTGAGATCAGATTGACTTaGAAGGAAGGGACAGTGGGCTTCTCCAATAGAGCC +
Preference number: 3 (lower is better)
Translates to: VKPDSLFEIRLT*KEGTVGFSNRA
Trigger: GGCTCTATTGGAGAAGCCCACTGTCCCTTCCTTCCAAGTCAATCTGATCTCAAAAAGTGAGTCCGGCTTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR TCA 72 bp CTCCCATTTCTCAGGGAGAAATGCAGCGTCTCAGGATaGCTTCTCCAAGGTCCTCTTGGTAAGTTTCTTGTG +
Preference number: 3 (lower is better)
Translates to: LPFLREKCSVSG*LLQGPLGKFLV
Trigger: CACAAGAAACTTACCAAGAGGACCTTGGAGAAGTCATCCTGAGACGCTGCATTTCTCCCTGAGAAATGGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR CAA 90 bp CTTCATGGGGTTGCTGTGAGGACTGAATGGGTTAGAAGAATGGCTGGCACATGGAGTTTTCCTGGAGTTTaGGATCAAGATGAGGCTAGA +
Preference number: 3 (lower is better)
Translates to: LHGVAVRTEWVRRMAGTWSFPGV*DQDEAR
Trigger: TCTAGCCTCATCTTGATCCAAAACTCCAGGAAAACT...CCATGTGCCAGCCATTCTTCTAACCCATTCAGTCCTCACAGCAACCCCATGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR CAA 90 bp CTTCATGGGGTTGCTGTGAGGACTGAATGGGTTAGAAGAATGGCTGGCACATGGTCCAATAGAGCCTGCTaGGAGAGAAATCTTTCTAGA +
Preference number: 3 (lower is better)
Translates to: LHGVAVRTEWVRRMAGTWSNRAC*ERNLSR
Trigger: TCTAGAAAGATTTCTCTCCAAGCAGGCTCTATTGGA...CCATGTGCCAGCCATTCTTCTAACCCATTCAGTCCTCACAGCAACCCCATGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR CAA 90 bp GTTAGTGTTATTCCTAAGCTAAAAAGGAAGTCACCCCTTGCAAAGGCTAGGGCAAAACAGGAGGAAGACTaGGCCTCCCCCTGCATATCT +
Preference number: 3 (lower is better)
Translates to: VSVIPKLKRKSPLAKARAKQEED*ASPCIS
Trigger: AGATATGCAGGGGGAGGCCAAGTCTTCCTCCTGTTT...TGCCCTAGCCTTTGCAAGGGGTGACTTCCTTTTTAGCTTAGGAATAACACTAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR CAA 90 bp GTTAGTGTTATTCCTAAGCTAAAAAGGAAGTCACCCCTTGCAAAGGCTAGGGCAGCCCACCCTTCAAATTaGGGACCTGACCAAAGTGTT +
Preference number: 3 (lower is better)
Translates to: VSVIPKLKRKSPLAKARAAHPSN*GPDQSV
Trigger: AACACTTTGGTCAGGTCCCAAATTTGAAGGGTGGGC...TGCCCTAGCCTTTGCAAGGGGTGACTTCCTTTTTAGCTTAGGAATAACACTAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR TCA 72 bp TGGAGAGAAATCTTTCTAGAGTCATCTGAGGGAAGATaGGGCTCTGTGTTATGCCAGCTTCCACCAAGACTC +
Preference number: 3 (lower is better)
Translates to: WREIFLESSEGR*GSVLCQLPPRL
Trigger: GAGTCTTGGTGGAAGCTGGCATAACACAGAGCCTCATCTTCCCTCAGATGACTCTAGAAAGATTTCTCTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR-3UTR CAA 90 bp GTTAGTGTTATTCCTAAGCTAAAAAGGAAGTCACCCCTTGCAAAGGCTAGGGCAACGAGTGCACATCTCTaGACCAGAAGTCTTTCATCA +
Preference number: 3 (lower is better)
Translates to: VSVIPKLKRKSPLAKARATSAHL*TRSLSS
Trigger: TGATGAAAGACTTCTGGTCAAGAGATGTGCACTCGT...TGCCCTAGCCTTTGCAAGGGGTGACTTCCTTTTTAGCTTAGGAATAACACTAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR TCA 72 bp AGATTTTATTTAAAAGCTCAGATGTTCAATTTCTCATaGGAAATCAGAAGATCTGGTGTCTCTGGGCCCACA +
Preference number: 3 (lower is better)
Translates to: RFYLKAQMFNFS*EIRRSGVSGPT
Trigger: TGTGGGCCCAGAGACACCAGATCTTCTGATTTCTCATGAGAAATTGAACATCTGAGCTTTTAAATAAAATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp AGGCTAGGGCAGATGGGGCGGAACAGGGCACCTCTCTGGCCGGTGCCCGGGAGTGGAGCTGGGGCTCACTaGGGCTCCCAGGGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: RLGQMGRNRAPLWPVPGSGAGAH*GSQGGG
Trigger: CCCACCACCCTGGGAGCCCCAGTGAGCCCCAGCTCC...ACTCCCGGGCACCGGCCAGAGAGGTGCCCTGTTCCGCCCCATCTGCCCTAGCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp AGGCTAGGGCAGATGGGGCGGAACAGGGCACCTCTCTGGCCGGTGCCCGGGAGTCAGGCAGGTGGCCCGTaGCCTCTGGGGCAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: RLGQMGRNRAPLWPVPGSQAGGP*PLGQVV
Trigger: CACCACCTGCCCCAGAGGCCACGGGCCACCTGCCTG...ACTCCCGGGCACCGGCCAGAGAGGTGCCCTGTTCCGCCCCATCTGCCCTAGCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR TCA 90 bp GACAGAAGCGTGGGAGGCTGGCAATGCTCCCCTCCCTGCATCGGGACCAGGAGGTGGGGCATGCACTCGTaGGCCCTGCGGCGGCTCGGG +
Preference number: 4 (lower is better)
Translates to: DRSVGGWQCSPPCIGTRRWGMHS*ALRRLG
Trigger: CCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCA...CCTCCTGGTCCCGATGCAGGGAGGGGAGCATTGCCAGCCTCCCACGCTTCTGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp AGGCTAGGGCAGATGGGGCGGAACAGGGCACCTCTCTGGCCGGTGCCCGGGAGTGACTTGGCCTCCCCCTaGATATCTCCCGCCCCACCC +
Preference number: 4 (lower is better)
Translates to: RLGQMGRNRAPLWPVPGSDLASP*ISPAPP
Trigger: GGGTGGGGCGGGAGATATGCAGGGGGAGGCCAAGTC...ACTCCCGGGCACCGGCCAGAGAGGTGCCCTGTTCCGCCCCATCTGCCCTAGCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp GACAGAAGCGTGGGAGGCTGGCAATGCTCCCCTCCCTGCATCGGGACCAGGAGGGAGGGGGCTGATGGCTaGGGAGCTGGCGAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: DRSVGGWQCSPPCIGTRREGADG*GAGEAG
Trigger: CCCAGCCTCGCCAGCTCCCCAGCCATCAGCCCCCTC...CCTCCTGGTCCCGATGCAGGGAGGGGAGCATTGCCAGCCTCCCACGCTTCTGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp AGGCTAGGGCAGATGGGGCGGAACAGGGCACCTCTCTGGCCGGTGCCCGGGAGTGACTGGGACAGGAGCTaGGCAGCCCAGGTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: RLGQMGRNRAPLWPVPGSDWDRS*AAQVLP
Trigger: AGGGAGGACCTGGGCTGCCCAGCTCCTGTCCCAGTC...ACTCCCGGGCACCGGCCAGAGAGGTGCCCTGTTCCGCCCCATCTGCCCTAGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR TCA 90 bp AGGCTAGGGCAGATGGGGCGGAACAGGGCACCTCTCTGGCCGGTGCCCGGGAGTGGTGTGGAGCTGCTGTaGGCTGTCCTCCTCCGAGTC +
Preference number: 4 (lower is better)
Translates to: RLGQMGRNRAPLWPVPGSGVELL*AVLLRV
Trigger: GACTCGGAGGAGGACAGCTCACAGCAGCTCCACACC...ACTCCCGGGCACCGGCCAGAGAGGTGCCCTGTTCCGCCCCATCTGCCCTAGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp GACAGAAGCGTGGGAGGCTGGCAATGCTCCCCTCCCTGCATCGGGACCAGGAGGAGCCGCAGTGGCCTGTaGCCGTCCGTGGACTGGAGG +
Preference number: 4 (lower is better)
Translates to: DRSVGGWQCSPPCIGTRRSRSGL*PSVDWR
Trigger: CCTCCAGTCCACGGACGGCCACAGGCCACTGCGGCT...CCTCCTGGTCCCGATGCAGGGAGGGGAGCATTGCCAGCCTCCCACGCTTCTGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398786.2
CDS-3UTR CCA 90 bp GACAGAAGCGTGGGAGGCTGGCAATGCTCCCCTCCCTGCATCGGGACCAGGAGGAGAGGCCTCAGTTGCTaGGTGGGGAGGGAGGCCCGG +
Preference number: 4 (lower is better)
Translates to: DRSVGGWQCSPPCIGTRRRGLSC*VGREAR
Trigger: CCGGGCCTCCCTCCCCACCCAGCAACTGAGGCCTCT...CCTCCTGGTCCCGATGCAGGGAGGGGAGCATTGCCAGCCTCCCACGCTTCTGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR TCA 90 bp AGGCTAGGGCAGATGGGGCGGAACAGGGCACCTCTCTGGCCGGTGCCCGGGAGTTGCTCATGGCTCCTGTaGTTCCAGCCGCAGTGGCCT +
Preference number: 4 (lower is better)
Translates to: RLGQMGRNRAPLWPVPGSCSWLL*FQPQWP
Trigger: AGGCCACTGCGGCTGGAATCACAGGAGCCATGAGCA...ACTCCCGGGCACCGGCCAGAGAGGTGCCCTGTTCCGCCCCATCTGCCCTAGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398786.2
CDS-3UTR GCA 90 bp AGGCTAGGGCAGATGGGGCGGAACAGGGCACCTCTCTGGCCGGTGCCCGGGAGTGGTGAGGTGTGGAGCTaGTGTGAGCTGTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: RLGQMGRNRAPLWPVPGSGEVWS*CELSSS
Trigger: GGAGGAGGACAGCTCACAGCAGCTCCACACCTCACC...ACTCCCGGGCACCGGCCAGAGAGGTGCCCTGTTCCGCCCCATCTGCCCTAGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp AGGCTAGGGCAGATGGGGCGGAACAGGGCACCTCTCTGGCCGGTGCCCGGGAGTTTTGGGAAAGGGCGCTaGCCTGGGCATGCAAGGAGC +
Preference number: 4 (lower is better)
Translates to: RLGQMGRNRAPLWPVPGSFGKGR*PGHARS
Trigger: GCTCCTTGCATGCCCAGGCCAGCGCCCTTTCCCAAA...ACTCCCGGGCACCGGCCAGAGAGGTGCCCTGTTCCGCCCCATCTGCCCTAGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp AGGCTAGGGCAGATGGGGCGGAACAGGGCACCTCTCTGGCCGGTGCCCGGGAGTTCCCTGGGTGAGGTGTaGAGCTGCTGTGAGCTGTCC +
Preference number: 4 (lower is better)
Translates to: RLGQMGRNRAPLWPVPGSSLGEV*SCCELS
Trigger: GGACAGCTCACAGCAGCTCCACACCTCACCCAGGGA...ACTCCCGGGCACCGGCCAGAGAGGTGCCCTGTTCCGCCCCATCTGCCCTAGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp AGGCTAGGGCAGATGGGGCGGAACAGGGCACCTCTCTGGCCGGTGCCCGGGAGTTTGGGGAGACGTGGCTaGCTGCACTGTGGGTCACAG +
Preference number: 4 (lower is better)
Translates to: RLGQMGRNRAPLWPVPGSLGRRG*LHCGSQ
Trigger: CTGTGACCCACAGTGCAGCCAGCCACGTCTCCCCAA...ACTCCCGGGCACCGGCCAGAGAGGTGCCCTGTTCCGCCCCATCTGCCCTAGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp GACAGAAGCGTGGGAGGCTGGCAATGCTCCCCTCCCTGCATCGGGACCAGGAGGCCATCCCAGGGAGTGTaGGCCCCCAGGTTGCAGAGC +
Preference number: 4 (lower is better)
Translates to: DRSVGGWQCSPPCIGTRRPSQGV*APRLQS
Trigger: GCTCTGCAACCTGGGGGCCCACACTCCCTGGGATGG...CCTCCTGGTCCCGATGCAGGGAGGGGAGCATTGCCAGCCTCCCACGCTTCTGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp AGGCTAGGGCAGATGGGGCGGAACAGGGCACCTCTCTGGCCGGTGCCCGGGAGTCGCTGTGGACTGGAGTaGAGGACAGCTGCCCTTCCA +
Preference number: 4 (lower is better)
Translates to: RLGQMGRNRAPLWPVPGSRCGLE*RTAALP
Trigger: TGGAAGGGCAGCTGTCCTCCACTCCAGTCCACAGCG...ACTCCCGGGCACCGGCCAGAGAGGTGCCCTGTTCCGCCCCATCTGCCCTAGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR TCA 90 bp AGGCTAGGGCAGATGGGGCGGAACAGGGCACCTCTCTGGCCGGTGCCCGGGAGTGGCCAAAGGCCCAGATaGCCACGAGTGCACATCTCT +
Preference number: 4 (lower is better)
Translates to: RLGQMGRNRAPLWPVPGSGQRPR*PRVHIS
Trigger: AGAGATGTGCACTCGTGGTCATCTGGGCCTTTGGCC...ACTCCCGGGCACCGGCCAGAGAGGTGCCCTGTTCCGCCCCATCTGCCCTAGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR TCA 90 bp AGGCTAGGGCAGATGGGGCGGAACAGGGCACCTCTCTGGCCGGTGCCCGGGAGTGGGGTGGGACTGCTTTaGCGGGTCATCAGCAAAGCA +
Preference number: 4 (lower is better)
Translates to: RLGQMGRNRAPLWPVPGSGVGLL*RVISKA
Trigger: TGCTTTGCTGATGACCCGTCAAAGCAGTCCCACCCC...ACTCCCGGGCACCGGCCAGAGAGGTGCCCTGTTCCGCCCCATCTGCCCTAGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp AGGCTAGGGCAGATGGGGCGGAACAGGGCACCTCTCTGGCCGGTGCCCGGGAGTTTGGAGAGCCCTGTTTaGTCCTCCTCCCAGCTGGCA +
Preference number: 4 (lower is better)
Translates to: RLGQMGRNRAPLWPVPGSLESPV*SSSQLA
Trigger: TGCCAGCTGGGAGGAGGAGCAAACAGGGCTCTCCAA...ACTCCCGGGCACCGGCCAGAGAGGTGCCCTGTTCCGCCCCATCTGCCCTAGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp GACAGAAGCGTGGGAGGCTGGCAATGCTCCCCTCCCTGCATCGGGACCAGGAGGCGCTGCTCTGGAAGGTaGTGTGGGGAAAGGGGGACC +
Preference number: 4 (lower is better)
Translates to: DRSVGGWQCSPPCIGTRRRCSGR*CGERGT
Trigger: GGTCCCCCTTTCCCCACAGCACCTTCCAGAGCAGCG...CCTCCTGGTCCCGATGCAGGGAGGGGAGCATTGCCAGCCTCCCACGCTTCTGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp GACAGAAGCGTGGGAGGCTGGCAATGCTCCCCTCCCTGCATCGGGACCAGGAGGGGTGGGGCAGCTTTGTaGTGGGATCCTGGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: DRSVGGWQCSPPCIGTRRGGAAL*WDPGQL
Trigger: CAGCTGGCCAGGATCCCACCACAAAGCTGCCCCACC...CCTCCTGGTCCCGATGCAGGGAGGGGAGCATTGCCAGCCTCCCACGCTTCTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp AGGCTAGGGCAGATGGGGCGGAACAGGGCACCTCTCTGGCCGGTGCCCGGGAGTAGGTCTTCTCAGCTGTaGAAGGGAGGCCCAAGGAGC +
Preference number: 4 (lower is better)
Translates to: RLGQMGRNRAPLWPVPGSRSSQL*KGGPRS
Trigger: GCTCCTTGGGCCTCCCTTCCACAGCTGAGAAGACCT...ACTCCCGGGCACCGGCCAGAGAGGTGCCCTGTTCCGCCCCATCTGCCCTAGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441508.4
3UTR CAA 72 bp GGACAGCTGCCCTTCCAGCGGGGCCCATCCAGGTGTTaGACCCAGGTGCTATACCCGCCAGTCCCTGACAGC +
Preference number: 4 (lower is better)
Translates to: GQLPFQRGPSRC*TQVLYPPVPDS
Trigger: GCTGTCAGGGACTGGCGGGTATAGCACCTGGGTCAAACACCTGGATGGGCCCCGCTGGAAGGGCAGCTGTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR TCA 90 bp AGGCTAGGGCAGATGGGGCGGAACAGGGCACCTCTCTGGCCGGTGCCCGGGAGTCAATCCCTTCCTGATTaGTCCCAACGTGGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: RLGQMGRNRAPLWPVPGSQSLPD*SQRGCP
Trigger: AGGGCACCCACGTTGGGATCAATCAGGAAGGGATTG...ACTCCCGGGCACCGGCCAGAGAGGTGCCCTGTTCCGCCCCATCTGCCCTAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR TCA 90 bp GACAGAAGCGTGGGAGGCTGGCAATGCTCCCCTCCCTGCATCGGGACCAGGAGGCAGGGCCTCAGCTTGTaGGGACTTGGAGCATACCCC +
Preference number: 4 (lower is better)
Translates to: DRSVGGWQCSPPCIGTRRQGLSL*GLGAYP
Trigger: GGGGTATGCTCCAAGTCCTCACAAGCTGAGGCCCTG...CCTCCTGGTCCCGATGCAGGGAGGGGAGCATTGCCAGCCTCCCACGCTTCTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR TCA 90 bp AGGCTAGGGCAGATGGGGCGGAACAGGGCACCTCTCTGGCCGGTGCCCGGGAGTGAGGGAGGCCCGGAGTaGATGAGTCTCTTTACCAAC +
Preference number: 4 (lower is better)
Translates to: RLGQMGRNRAPLWPVPGSEGGPE*MSLFTN
Trigger: GTTGGTAAAGAGACTCATTCACTCCGGGCCTCCCTC...ACTCCCGGGCACCGGCCAGAGAGGTGCCCTGTTCCGCCCCATCTGCCCTAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp CCACAGATAGCATCCCTAGTGTGGGCAGGACTTGGGACCCCACAGCTGTCCTGGCAGGGTGGTGGGGCATaGACTCGTGAGCCCTGCGGC +
Preference number: 4 (lower is better)
Translates to: PQIASLVWAGLGTPQLSWQGGGA*TREPCG
Trigger: GCCGCAGGGCTCACGAGTGCATGCCCCACCACCCTG...CCAGGACAGCTGTGGGGTCCCAAGTCCTGCCCACACTAGGGATGCTATCTGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp AGGCTAGGGCAGATGGGGCGGAACAGGGCACCTCTCTGGCCGGTGCCCGGGAGTGCTGCTTCTAGGAGGTaGTTACGAGCCCCAGGTTGT +
Preference number: 4 (lower is better)
Translates to: RLGQMGRNRAPLWPVPGSAASRR*LRAPGC
Trigger: ACAACCTGGGGCTCGTAACCACCTCCTAGAAGCAGC...ACTCCCGGGCACCGGCCAGAGAGGTGCCCTGTTCCGCCCCATCTGCCCTAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp GACAGAAGCGTGGGAGGCTGGCAATGCTCCCCTCCCTGCATCGGGACCAGGAGGTCCTCCGAGTCCAGGTaGCATCACCTCCAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: DRSVGGWQCSPPCIGTRRSSESR*HHLQLL
Trigger: CAGCAGCTGGAGGTGATGCCACCTGGACTCGGAGGA...CCTCCTGGTCCCGATGCAGGGAGGGGAGCATTGCCAGCCTCCCACGCTTCTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp CCACAGATAGCATCCCTAGTGTGGGCAGGACTTGGGACCCCACAGCTGTCCTGGGCAGGCTCCCGGGCTTaGGAGGGACAGAAGCGTGGG +
Preference number: 4 (lower is better)
Translates to: PQIASLVWAGLGTPQLSWAGSRA*EGQKRG
Trigger: CCCACGCTTCTGTCCCTCCCAAGCCCGGGAGCCTGC...CCAGGACAGCTGTGGGGTCCCAAGTCCTGCCCACACTAGGGATGCTATCTGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp AGGCTAGGGCAGATGGGGCGGAACAGGGCACCTCTCTGGCCGGTGCCCGGGAGTCCGAGGCTCCCCTCTTaGGAAGTAAACAGGCACAAG +
Preference number: 4 (lower is better)
Translates to: RLGQMGRNRAPLWPVPGSPRLPS*EVNRHK
Trigger: CTTGTGCCTGTTTACTTCCCAAGAGGGGAGCCTCGG...ACTCCCGGGCACCGGCCAGAGAGGTGCCCTGTTCCGCCCCATCTGCCCTAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp AGCAGGCGCAACAGCTCCAAGGCTCAGAGGGAGAGAAGGGAGGACCCTGAAAACCAGGCAGGTGGCCCGTaGCCTCTGGGGCAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: SRRNSSKAQRERREDPENQAGGP*PLGQVV
Trigger: CACCACCTGCCCCAGAGGCCACGGGCCACCTGCCTG...GTTTTCAGGGTCCTCCCTTCTCTCCCTCTGAGCCTTGGAGCTGTTGCGCCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR CAA 72 bp GCACCCGGGAAACCCAAGGAAGAGAGCCCCGAGGTTTaGCCCCAGCACTGGGCCAGCACAGATGCCAGGACA +
Preference number: 4 (lower is better)
Translates to: APGKPKEESPEV*PQHWASTDART
Trigger: TGTCCTGGCATCTGTGCTGGCCCAGTGCTGGGGCAAAACCTCGGGGCTCTCTTCCTTGGGTTTCCCGGGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR TCA 90 bp CCACAGATAGCATCCCTAGTGTGGGCAGGACTTGGGACCCCACAGCTGTCCTGGGGGAGTGACGGGAGCTaGGAGAAAGGCGAGGGGGCT +
Preference number: 4 (lower is better)
Translates to: PQIASLVWAGLGTPQLSWGSDGS*EKGEGA
Trigger: AGCCCCCTCGCCTTTCTCTCAGCTCCCGTCACTCCC...CCAGGACAGCTGTGGGGTCCCAAGTCCTGCCCACACTAGGGATGCTATCTGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR TCA 90 bp GCAGGCGCAACAGCTCCAAGGCTCAGAGGGAGAGAAGGGAGGACCCTGAAAACAGGGATCCTGGCCAGCTaGCTGGGACAGGAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: AGATAPRLRGREGRTLKTGILAS*LGQELG
Trigger: GCCCAGCTCCTGTCCCAGTCAGCTGGCCAGGATCCC...TGTTTTCAGGGTCCTCCCTTCTCTCCCTCTGAGCCTTGGAGCTGTTGCGCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp GACAGAAGCGTGGGAGGCTGGCAATGCTCCCCTCCCTGCATCGGGACCAGGAGGAGCAGCGAGGGGGTCTaGAGAGAGGAAGGTGCTCTT +
Preference number: 4 (lower is better)
Translates to: DRSVGGWQCSPPCIGTRRSSEGV*REEGAL
Trigger: AAGAGCACCTTCCTCTCTGCAGACCCCCTCGCTGCT...CCTCCTGGTCCCGATGCAGGGAGGGGAGCATTGCCAGCCTCCCACGCTTCTGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp AGCAGCGAGGGGGTCTGCAGAGAGGAAGGTGCTCTTCTGAGGATCATCTTTGGGGCCTGTGGCCGTCCGTaGACTGGAGGCCTCACCCGC +
Preference number: 4 (lower is better)
Translates to: SSEGVCREEGALLRIIFGACGRP*TGGLTR
Trigger: GCGGGTGAGGCCTCCAGTCCACGGACGGCCACAGGC...CCCAAAGATGATCCTCAGAAGAGCACCTTCCTCTCTGCAGACCCCCTCGCTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398786.2
CDS-3UTR CCA 90 bp AGGCTAGGGCAGATGGGGCGGAACAGGGCACCTCTCTGGCCGGTGCCCGGGAGTTTTGCGAGAGTGTGGTaGCTAGCTCCAGAAGGAGGA +
Preference number: 4 (lower is better)
Translates to: RLGQMGRNRAPLWPVPGSFARVW*LAPEGG
Trigger: TCCTCCTTCTGGAGCTAGCCACCACACTCTCGCAAA...ACTCCCGGGCACCGGCCAGAGAGGTGCCCTGTTCCGCCCCATCTGCCCTAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp GACAGAAGCGTGGGAGGCTGGCAATGCTCCCCTCCCTGCATCGGGACCAGGAGGCTGAGGATAGGGCTCTaGCTCCCCACAAACAGGAGG +
Preference number: 4 (lower is better)
Translates to: DRSVGGWQCSPPCIGTRRLRIGL*LPTNRR
Trigger: CCTCCTGTTTGTGGGGAGCCAGAGCCCTATCCTCAG...CCTCCTGGTCCCGATGCAGGGAGGGGAGCATTGCCAGCCTCCCACGCTTCTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp TTCCTGCAGCCTGCAGCACCGGTCTCTGAAGCAGGAGGATCTACAGGTAGACCTGGTGGGGGCCCAGGGTaGGTCCGCTGCTCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: FLQPAAPVSEAGGSTGRPGGGPG*VRCSGR
Trigger: CCTTCCAGAGCAGCGGACCCACCCTGGGCCCCCACC...AGGTCTACCTGTAGATCCTCCTGCTTCAGAGACCGGTGCTGCAGGCTGCAGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp CCACAGATAGCATCCCTAGTGTGGGCAGGACTTGGGACCCCACAGCTGTCCTGGAGGCCCAAGGAGCCCTaGGCAGTGCCTGTGACCCCA +
Preference number: 4 (lower is better)
Translates to: PQIASLVWAGLGTPQLSWRPKEP*AVPVTP
Trigger: TGGGGTCACAGGCACTGCCCAGGGCTCCTTGGGCCT...CCAGGACAGCTGTGGGGTCCCAAGTCCTGCCCACACTAGGGATGCTATCTGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441508.4
CDS-3UTR TCA 90 bp GAAGGGCCTTTCAGAGTAGCGGGGAGAAAGAGACGTCACAATTTCCCGGAAAGGTGGGGCATGCACTCGTaGGCCCTGCGGCGGCTCGGG +
Preference number: 4 (lower is better)
Translates to: EGPFRVAGRKRRHNFPERWGMHS*ALRRLG
Trigger: CCCGAGCCGCCGCAGGGCTCACGAGTGCATGCCCCA...CCTTTCCGGGAAATTGTGACGTCTCTTTCTCCCCGCTACTCTGAAAGGCCCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR TCA 90 bp AGGCTAGGGCAGATGGGGCGGAACAGGGCACCTCTCTGGCCGGTGCCCGGGAGTGCCACAGTTAGTGGGTaGCAGGTCTTTCAGTTTTCC +
Preference number: 4 (lower is better)
Translates to: RLGQMGRNRAPLWPVPGSATVSG*QVFQFS
Trigger: GGAAAACTGAAAGACCTGTCACCCACTAACTGTGGC...ACTCCCGGGCACCGGCCAGAGAGGTGCCCTGTTCCGCCCCATCTGCCCTAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR TCA 90 bp AGGCTAGGGCAGATGGGGCGGAACAGGGCACCTCTCTGGCCGGTGCCCGGGAGTGAGGCCCGGAGTGAATaGGTCTCTTTACCAACTATG +
Preference number: 4 (lower is better)
Translates to: RLGQMGRNRAPLWPVPGSEARSE*VSLPTM
Trigger: CATAGTTGGTAAAGAGACTCATTCACTCCGGGCCTC...ACTCCCGGGCACCGGCCAGAGAGGTGCCCTGTTCCGCCCCATCTGCCCTAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp AATGACAACCGGCCCATCTTTCTGCAGAGCAGCTATGAGGCCAGCGTCCCTGAGCAGGGTGGTGGGGCATaGACTCGTGAGCCCTGCGGC +
Preference number: 4 (lower is better)
Translates to: NDNRPIFLQSSYEASVPEQGGGA*TREPCG
Trigger: GCCGCAGGGCTCACGAGTGCATGCCCCACCACCCTG...CTCAGGGACGCTGGCCTCATAGCTGCTCTGCAGAAAGATGGGCCGGTTGTCATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp TTCCTGCAGCCTGCAGCACCGGTCTCTGAAGCAGGAGGATCTACAGGTAGACCTCACCCTCGGGGAGGCTaGCGCTTTCCCTGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: FLQPAAPVSEAGGSTGRPHPRGG*RFPWVR
Trigger: CCTCACCCAGGGAAAGCGGCAGCCTCCCCGAGGGTG...AGGTCTACCTGTAGATCCTCCTGCTTCAGAGACCGGTGCTGCAGGCTGCAGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp GACAGAAGCGTGGGAGGCTGGCAATGCTCCCCTCCCTGCATCGGGACCAGGAGGAAGTCACAGGAAGTGTaGCCCTCTCTCAGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: DRSVGGWQCSPPCIGTRRKSQEV*PSLRQL
Trigger: CAGCTGCCTGAGAGAGGGGCACACTTCCTGTGACTT...CCTCCTGGTCCCGATGCAGGGAGGGGAGCATTGCCAGCCTCCCACGCTTCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp GACAGAAGCGTGGGAGGCTGGCAATGCTCCCCTCCCTGCATCGGGACCAGGAGGCATAACTCCAGCCTCTaGCTCCATCTGCATGTGGCC +
Preference number: 4 (lower is better)
Translates to: DRSVGGWQCSPPCIGTRRHNSSL*LHLHVA
Trigger: GGCCACATGCAGATGGAGGCAGAGGCTGGAGTTATG...CCTCCTGGTCCCGATGCAGGGAGGGGAGCATTGCCAGCCTCCCACGCTTCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp GACAGAAGCGTGGGAGGCTGGCAATGCTCCCCTCCCTGCATCGGGACCAGGAGGATCACCTCCAGCTGCTaGAAATGCCCTGCCTCTTGC +
Preference number: 4 (lower is better)
Translates to: DRSVGGWQCSPPCIGTRRITSSC*KCPASC
Trigger: GCAAGAGGCAGGGCATTTCCAGCAGCTGGAGGTGAT...CCTCCTGGTCCCGATGCAGGGAGGGGAGCATTGCCAGCCTCCCACGCTTCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp GCAGGCGCAACAGCTCCAAGGCTCAGAGGGAGAGAAGGGAGGACCCTGAAAACAGACTGGGACAGGAGCTaGGCAGCCCAGGTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: AGATAPRLRGREGRTLKTDWDRS*AAQVLP
Trigger: AGGGAGGACCTGGGCTGCCCAGCTCCTGTCCCAGTC...TGTTTTCAGGGTCCTCCCTTCTCTCCCTCTGAGCCTTGGAGCTGTTGCGCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR TCA 90 bp GCAGGCGCAACAGCTCCAAGGCTCAGAGGGAGAGAAGGGAGGACCCTGAAAACACAAGGGTCCCGGGAGTaGCGGGAGCTGAGAGAAAGG +
Preference number: 4 (lower is better)
Translates to: AGATAPRLRGREGRTLKTQGSRE*RELRER
Trigger: CCTTTCTCTCAGCTCCCGTCACTCCCGGGACCCTTG...TGTTTTCAGGGTCCTCCCTTCTCTCCCTCTGAGCCTTGGAGCTGTTGCGCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp GGCCACGCTTCACTCTGTACACAGAAGCCTCATACTTCTGTGCACAGAACTGGGTGCACTCGTGAGCCCTaGGGCGGCTCGGGTCCAGCG +
Preference number: 4 (lower is better)
Translates to: GHASLCTQKPHTSVHRTGCTREP*GGSGPA
Trigger: CGCTGGACCCGAGCCGCCGCAGGGCTCACGAGTGCA...CCCAGTTCTGTGCACAGAAGTATGAGGCTTCTGTGTACAGAGTGAAGCGTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp TTCCTGCAGCCTGCAGCACCGGTCTCTGAAGCAGGAGGATCTACAGGTAGACCTCAATGCTCCCCTCCCTaGATCGGGACCAGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: FLQPAAPVSEAGGSTGRPQCSPP*IGTRRR
Trigger: CCGCCTCCTGGTCCCGATGCAGGGAGGGGAGCATTG...AGGTCTACCTGTAGATCCTCCTGCTTCAGAGACCGGTGCTGCAGGCTGCAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp AATGACAACCGGCCCATCTTTCTGCAGAGCAGCTATGAGGCCAGCGTCCCTGAGCCAGGGTGGGTCCGCTaGTCTGGAAGGTGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: NDNRPIFLQSSYEASVPEPGWVR*SGRCCG
Trigger: CCCACAGCACCTTCCAGAGCAGCGGACCCACCCTGG...CTCAGGGACGCTGGCCTCATAGCTGCTCTGCAGAAAGATGGGCCGGTTGTCATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp ACGAGTGCACATCTCTTGACCAGAAGTCTTTCATCAAGCAGCAGCGAGGGGGTCGGAGCTGGGGCTCACTaGGGCTCCCAGGGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: TSAHLLTRSLSSSSSEGVGAGAH*GSQGGG
Trigger: CCCACCACCCTGGGAGCCCCAGTGAGCCCCAGCTCC...GACCCCCTCGCTGCTGCTTGATGAAAGACTTCTGGTCAAGAGATGTGCACTCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp TTCCTGCAGCCTGCAGCACCGGTCTCTGAAGCAGGAGGATCTACAGGTAGACCTTTCCAGAGCCGGAGCTaGGGCTCACTGGGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: FLQPAAPVSEAGGSTGRPFQSRS*GSLGLP
Trigger: TGGGAGCCCCAGTGAGCCCCAGCTCCGGCTCTGGAA...AGGTCTACCTGTAGATCCTCCTGCTTCAGAGACCGGTGCTGCAGGCTGCAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp AGCAGCGAGGGGGTCTGCAGAGAGGAAGGTGCTCTTCTGAGGATCATCTTTGGGTTCCAGAGCCGGAGCTaGGGCTCACTGGGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: SSEGVCREEGALLRIIFGFQSRS*GSLGLP
Trigger: TGGGAGCCCCAGTGAGCCCCAGCTCCGGCTCTGGAA...CCCAAAGATGATCCTCAGAAGAGCACCTTCCTCTCTGCAGACCCCCTCGCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp ACGAGTGCACATCTCTTGACCAGAAGTCTTTCATCAAGCAGCAGCGAGGGGGTCGCTGTCGAGGGACGGTaGGCCGGCCATGGCGGAAGC +
Preference number: 4 (lower is better)
Translates to: TSAHLLTRSLSSSSSEGVAVEGR*AGHGGS
Trigger: GCTTCCGCCATGGCCGGCCCACCGTCCCTCGACAGC...GACCCCCTCGCTGCTGCTTGATGAAAGACTTCTGGTCAAGAGATGTGCACTCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp GCAGGCGCAACAGCTCCAAGGCTCAGAGGGAGAGAAGGGAGGACCCTGAAAACAGGCTGCCGCTTTCCCTaGGTGAGGTGTGGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: AGATAPRLRGREGRTLKTGCRFP*VRCGAA
Trigger: AGCAGCTCCACACCTCACCCAGGGAAAGCGGCAGCC...TGTTTTCAGGGTCCTCCCTTCTCTCCCTCTGAGCCTTGGAGCTGTTGCGCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp GACACACCCAGGCTGGGCCACGCTTCACTCTGTACACAGAAGCCTCATACTTCTGCAGGCTCCCGGGCTTaGGAGGGACAGAAGCGTGGG +
Preference number: 4 (lower is better)
Translates to: DTPRLGHASLCTQKPHTSAGSRA*EGQKRG
Trigger: CCCACGCTTCTGTCCCTCCCAAGCCCGGGAGCCTGC...AGAAGTATGAGGCTTCTGTGTACAGAGTGAAGCGTGGCCCAGCCTGGGTGTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp ACGAGTGCACATCTCTTGACCAGAAGTCTTTCATCAAGCAGCAGCGAGGGGGTCGGTGGGGGCCCAGGGTaGGTCCGCTGCTCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: TSAHLLTRSLSSSSSEGVGGGPG*VRCSGR
Trigger: CCTTCCAGAGCAGCGGACCCACCCTGGGCCCCCACC...GACCCCCTCGCTGCTGCTTGATGAAAGACTTCTGGTCAAGAGATGTGCACTCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp GGCCACGCTTCACTCTGTACACAGAAGCCTCATACTTCTGTGCACAGAACTGGGAGAGGCGGAAGCAGGTaGGGGCCCAGGGTGGGTCCG +
Preference number: 4 (lower is better)
Translates to: GHASLCTQKPHTSVHRTGRGGSR*GPRVGP
Trigger: CGGACCCACCCTGGGCCCCCACCTGCTTCCGCCTCT...CCCAGTTCTGTGCACAGAAGTATGAGGCTTCTGTGTACAGAGTGAAGCGTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp CCACAGATAGCATCCCTAGTGTGGGCAGGACTTGGGACCCCACAGCTGTCCTGGTCTGCCTGTCCGCTGTaGACTGGAGTGGAGGACAGC +
Preference number: 4 (lower is better)
Translates to: PQIASLVWAGLGTPQLSWSACPL*TGVEDS
Trigger: GCTGTCCTCCACTCCAGTCCACAGCGGACAGGCAGA...CCAGGACAGCTGTGGGGTCCCAAGTCCTGCCCACACTAGGGATGCTATCTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp GCAGGCGCAACAGCTCCAAGGCTCAGAGGGAGAGAAGGGAGGACCCTGAAAACAGGCCCTCTGTGCTCATaGCTCCTCAGAGCCAGACCC +
Preference number: 4 (lower is better)
Translates to: AGATAPRLRGREGRTLKTGPLCS*LLRARP
Trigger: GGGTCTGGCTCTGAGGAGCCATGAGCACAGAGGGCC...TGTTTTCAGGGTCCTCCCTTCTCTCCCTCTGAGCCTTGGAGCTGTTGCGCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441508.4
CDS-3UTR TCA 90 bp TCTCTTGACCAGAAGTCTTTCATCAAGCAGCAGCGAGGGGGTCTGCAGAGAGGATGCAGGCCAGGGCGATaGGCATGGGGAGGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: SLDQKSFIKQQRGGLQRGCRPGR*AWGGGQ
Trigger: CTGACCCCCTCCCCATGCTCATCGCCCTGGCCTGCA...TCCTCTCTGCAGACCCCCTCGCTGCTGCTTGATGAAAGACTTCTGGTCAAGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR TCA 90 bp GACACACCCAGGCTGGGCCACGCTTCACTCTGTACACAGAAGCCTCATACTTCTCCAACGTGGGTGCCCTaGAGAGGGGCCACCAAGACG +
Preference number: 4 (lower is better)
Translates to: DTPRLGHASLCTQKPHTSPTWVP*RGATKT
Trigger: CGTCTTGGTGGCCCCTCTTCAGGGCACCCACGTTGG...AGAAGTATGAGGCTTCTGTGTACAGAGTGAAGCGTGGCCCAGCCTGGGTGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR TCA 90 bp CCTGAAAACAATTTGGGTGTGCACCCACACCTCTGCCCAGAGGCCTCAGTTGCTACCCGCCCTGGCCTCTaGAGGGAGCCTCCTCGATCA +
Preference number: 4 (lower is better)
Translates to: PENNLGVHPHLCPEASVATRPGL*REPPRS
Trigger: TGATCGAGGAGGCTCCCTTCAGAGGCCAGGGCGGGT...AGCAACTGAGGCCTCTGGGCAGAGGTGTGGGTGCACACCCAAATTGTTTTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR TCA 90 bp CCACAGATAGCATCCCTAGTGTGGGCAGGACTTGGGACCCCACAGCTGTCCTGGTGGGGAGCAGGGAGCTaGCTCCCAGAAACACAGAGA +
Preference number: 4 (lower is better)
Translates to: PQIASLVWAGLGTPQLSWWGAGS*LPETQR
Trigger: TCTCTGTGTTTCTGGGAGTCAGCTCCCTGCTCCCCA...CCAGGACAGCTGTGGGGTCCCAAGTCCTGCCCACACTAGGGATGCTATCTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR TCA 90 bp AGGCTAGGGCAGATGGGGCGGAACAGGGCACCTCTCTGGCCGGTGCCCGGGAGTATCATTCAATCCACTTaGGTGCCTCAGTTACCTCCT +
Preference number: 4 (lower is better)
Translates to: RLGQMGRNRAPLWPVPGSIIQST*VPQLPP
Trigger: AGGAGGTAACTGAGGCACTCAAGTGGATTGAATGAT...ACTCCCGGGCACCGGCCAGAGAGGTGCCCTGTTCCGCCCCATCTGCCCTAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR TCA 90 bp GCAGGCGCAACAGCTCCAAGGCTCAGAGGGAGAGAAGGGAGGACCCTGAAAACAGCCCATCCAGGTGTTTaGCCCAGGTGCTATACCCGC +
Preference number: 4 (lower is better)
Translates to: AGATAPRLRGREGRTLKTAHPGV*PRCYTR
Trigger: GCGGGTATAGCACCTGGGTCAAACACCTGGATGGGC...TGTTTTCAGGGTCCTCCCTTCTCTCCCTCTGAGCCTTGGAGCTGTTGCGCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp AGCAGCGAGGGGGTCTGCAGAGAGGAAGGTGCTCTTCTGAGGATCATCTTTGGGCCATGGCGGAAGCTGTaGAGGGAGAGGCGCAAGGAG +
Preference number: 4 (lower is better)
Translates to: SSEGVCREEGALLRIIFGPWRKL*RERRKE
Trigger: CTCCTTGCGCCTCTCCCTGCACAGCTTCCGCCATGG...CCCAAAGATGATCCTCAGAAGAGCACCTTCCTCTCTGCAGACCCCCTCGCTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp TTCCTGCAGCCTGCAGCACCGGTCTCTGAAGCAGGAGGATCTACAGGTAGACCTAGAGCCCCGAGGTTTTaGCCCAGCACTGGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: FLQPAAPVSEAGGSTGRPRAPRF*PSTGPA
Trigger: TGCTGGCCCAGTGCTGGGGCAAAACCTCGGGGCTCT...AGGTCTACCTGTAGATCCTCCTGCTTCAGAGACCGGTGCTGCAGGCTGCAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp GGCCACGCTTCACTCTGTACACAGAAGCCTCATACTTCTGTGCACAGAACTGGGCAGGGAATCTGGGCCTaGCCACTGGGGCAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: GHASLCTQKPHTSVHRTGQGIWA*PLGQAP
Trigger: GGGAGCCTGCCCCAGTGGGCAGGCCCAGATTCCCTG...CCCAGTTCTGTGCACAGAAGTATGAGGCTTCTGTGTACAGAGTGAAGCGTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp CCACAGATAGCATCCCTAGTGTGGGCAGGACTTGGGACCCCACAGCTGTCCTGGGGCCCAGAACAGAGCTaGTTTCACAGAGCCCTTGGC +
Preference number: 4 (lower is better)
Translates to: PQIASLVWAGLGTPQLSWGPEQS*FHRALG
Trigger: GCCAAGGGCTCTGTGAAAGCAGCTCTGTTCTGGGCC...CCAGGACAGCTGTGGGGTCCCAAGTCCTGCCCACACTAGGGATGCTATCTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp AATGACAACCGGCCCATCTTTCTGCAGAGCAGCTATGAGGCCAGCGTCCCTGAGAAGGCCACAGCATCTTaGAGGCAGGTGGCCCGTGGC +
Preference number: 4 (lower is better)
Translates to: NDNRPIFLQSSYEASVPEKATAS*RQVARG
Trigger: GCCACGGGCCACCTGCCTGCAAGATGCTGTGGCCTT...CTCAGGGACGCTGGCCTCATAGCTGCTCTGCAGAAAGATGGGCCGGTTGTCATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp CCTGAAAACAATTTGGGTGTGCACCCACACCTCTGCCCAGAGGCCTCAGTTGCTGGAGTGGAGGACAGCTaGCCTTCCAGCGGGGCCCAT +
Preference number: 4 (lower is better)
Translates to: PENNLGVHPHLCPEASVAGVEDS*PSSGAH
Trigger: ATGGGCCCCGCTGGAAGGGCAGCTGTCCTCCACTCC...AGCAACTGAGGCCTCTGGGCAGAGGTGTGGGTGCACACCCAAATTGTTTTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp CCTCTGCCCACCCTTCAAATTTGGGACCTGACCAAAGTGTTTAACCCTCGCGTTTGGCCGTCCGTGGACTaGAGGCCTCACCCGCGGCAG +
Preference number: 4 (lower is better)
Translates to: PLPTLQIWDLTKVFNPRVWPSVD*RPHPRQ
Trigger: CTGCCGCGGGTGAGGCCTCCAGTCCACGGACGGCCA...AACGCGAGGGTTAAACACTTTGGTCAGGTCCCAAATTTGAAGGGTGGGCAGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398786.2
CDS-3UTR CCA 90 bp GAAGGGCCTTTCAGAGTAGCGGGGAGAAAGAGACGTCACAATTTCCCGGAAAGGGGGAGCTGGCGAGGCTaGGGCCCTCTGTGCTCATGG +
Preference number: 4 (lower is better)
Translates to: EGPFRVAGRKRRHNFPERGSWRG*GPLCSW
Trigger: CCATGAGCACAGAGGGCCCCAGCCTCGCCAGCTCCC...CCTTTCCGGGAAATTGTGACGTCTCTTTCTCCCCGCTACTCTGAAAGGCCCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp CTTCATGGGGTTGCTGTGAGGACTGAATGGGTTAGAAGAATGGCTGGCACATGGGAGGGGGCTGATGGCTaGGGAGCTGGCGAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: LHGVAVRTEWVRRMAGTWEGADG*GAGEAG
Trigger: CCCAGCCTCGCCAGCTCCCCAGCCATCAGCCCCCTC...CCATGTGCCAGCCATTCTTCTAACCCATTCAGTCCTCACAGCAACCCCATGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp ACGAGTGCACATCTCTTGACCAGAAGTCTTTCATCAAGCAGCAGCGAGGGGGTCACGGTGGGCCGGCCATaGCGGAAGCTGTGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: TSAHLLTRSLSSSSSEGVTVGRP*RKLCRE
Trigger: CTCCCTGCACAGCTTCCGCCATGGCCGGCCCACCGT...GACCCCCTCGCTGCTGCTTGATGAAAGACTTCTGGTCAAGAGATGTGCACTCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp GCAGGCGCAACAGCTCCAAGGCTCAGAGGGAGAGAAGGGAGGACCCTGAAAACACCAGGTTGTACCCTGTaGAGCCTCAGGCCAAAGGCC +
Preference number: 4 (lower is better)
Translates to: AGATAPRLRGREGRTLKTPGCTL*SLRPKA
Trigger: GGCCTTTGGCCTGAGGCTCCACAGGGTACAACCTGG...TGTTTTCAGGGTCCTCCCTTCTCTCCCTCTGAGCCTTGGAGCTGTTGCGCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp GCAGGCGCAACAGCTCCAAGGCTCAGAGGGAGAGAAGGGAGGACCCTGAAAACAACCCCACAGCTGTCCTaGAGAGGTCCAGACCATCCC +
Preference number: 4 (lower is better)
Translates to: AGATAPRLRGREGRTLKTTPQLS*RGPDHP
Trigger: GGGATGGTCTGGACCTCTCCAGGACAGCTGTGGGGT...TGTTTTCAGGGTCCTCCCTTCTCTCCCTCTGAGCCTTGGAGCTGTTGCGCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp AGCAGGCGCAACAGCTCCAAGGCTCAGAGGGAGAGAAGGGAGGACCCTGAAAACACAGCAGGATGGGGGTaGGGCAGCTTTGTGGTGGGA +
Preference number: 4 (lower is better)
Translates to: SRRNSSKAQRERREDPENTAGWG*GSFVVG
Trigger: TCCCACCACAAAGCTGCCCCACCCCCATCCTGCTGT...GTTTTCAGGGTCCTCCCTTCTCTCCCTCTGAGCCTTGGAGCTGTTGCGCCTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp AGCAGCGAGGGGGTCTGCAGAGAGGAAGGTGCTCTTCTGAGGATCATCTTTGGGCCAGAGCTCACTCCTTaGGGAGACGTGGCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: SSEGVCREEGALLRIIFGPELTP*GDVAGC
Trigger: GCAGCCAGCCACGTCTCCCCAAGGAGTGAGCTCTGG...CCCAAAGATGATCCTCAGAAGAGCACCTTCCTCTCTGCAGACCCCCTCGCTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp GACAGAAGCGTGGGAGGCTGGCAATGCTCCCCTCCCTGCATCGGGACCAGGAGGTCTCTTTACCAACTATaGGGTTTCCGACTCGGAGGC +
Preference number: 4 (lower is better)
Translates to: DRSVGGWQCSPPCIGTRRSLYQL*GFRLGG
Trigger: GCCTCCGAGTCGGAAACCCCATAGTTGGTAAAGAGA...CCTCCTGGTCCCGATGCAGGGAGGGGAGCATTGCCAGCCTCCCACGCTTCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp TCTCTTGACCAGAAGTCTTTCATCAAGCAGCAGCGAGGGGGTCTGCAGAGAGGAGCCTCAGTTGCTGGGTaGGGAGGGAGGCCCGGAGTG +
Preference number: 4 (lower is better)
Translates to: SLDQKSFIKQQRGGLQRGASVAG*GGRPGV
Trigger: CACTCCGGGCCTCCCTCCCCACCCAGCAACTGAGGC...TCCTCTCTGCAGACCCCCTCGCTGCTGCTTGATGAAAGACTTCTGGTCAAGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp GAAGGGCCTTTCAGAGTAGCGGGGAGAAAGAGACGTCACAATTTCCCGGAAAGGAGAGGCCTCAGTTGCTaGGTGGGGAGGGAGGCCCGG +
Preference number: 4 (lower is better)
Translates to: EGPFRVAGRKRRHNFPERRGLSC*VGREAR
Trigger: CCGGGCCTCCCTCCCCACCCAGCAACTGAGGCCTCT...CCTTTCCGGGAAATTGTGACGTCTCTTTCTCCCCGCTACTCTGAAAGGCCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp TTCCTGCAGCCTGCAGCACCGGTCTCTGAAGCAGGAGGATCTACAGGTAGACCTCTCTGGAAGGTGCTGTaGGGAAAGGGGGACCCAGGC +
Preference number: 4 (lower is better)
Translates to: FLQPAAPVSEAGGSTGRPLWKVL*GKGDPG
Trigger: GCCTGGGTCCCCCTTTCCCCACAGCACCTTCCAGAG...AGGTCTACCTGTAGATCCTCCTGCTTCAGAGACCGGTGCTGCAGGCTGCAGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp CTTCATGGGGTTGCTGTGAGGACTGAATGGGTTAGAAGAATGGCTGGCACATGGAGAGGCGGAAGCAGGTaGGGGCCCAGGGTGGGTCCG +
Preference number: 4 (lower is better)
Translates to: LHGVAVRTEWVRRMAGTWRGGSR*GPRVGP
Trigger: CGGACCCACCCTGGGCCCCCACCTGCTTCCGCCTCT...CCATGTGCCAGCCATTCTTCTAACCCATTCAGTCCTCACAGCAACCCCATGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR TCA 90 bp ACGAGTGCACATCTCTTGACCAGAAGTCTTTCATCAAGCAGCAGCGAGGGGGTCGGGAGTGACGGGAGCTaGGAGAAAGGCGAGGGGGCT +
Preference number: 4 (lower is better)
Translates to: TSAHLLTRSLSSSSSEGVGSDGS*EKGEGA
Trigger: AGCCCCCTCGCCTTTCTCTCAGCTCCCGTCACTCCC...GACCCCCTCGCTGCTGCTTGATGAAAGACTTCTGGTCAAGAGATGTGCACTCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR TCA 90 bp GACACACCCAGGCTGGGCCACGCTTCACTCTGTACACAGAAGCCTCATACTTCTCAAGGGTCCCGGGAGTaGCGGGAGCTGAGAGAAAGG +
Preference number: 4 (lower is better)
Translates to: DTPRLGHASLCTQKPHTSQGSRE*RELRER
Trigger: CCTTTCTCTCAGCTCCCGTCACTCCCGGGACCCTTG...AGAAGTATGAGGCTTCTGTGTACAGAGTGAAGCGTGGCCCAGCCTGGGTGTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR TCA 90 bp AGCAGGCGCAACAGCTCCAAGGCTCAGAGGGAGAGAAGGGAGGACCCTGAAAACTGCAGCACCGGTCTCTaGAGCAGGAGGATCTACAGG +
Preference number: 4 (lower is better)
Translates to: SRRNSSKAQRERREDPENCSTGL*SRRIYR
Trigger: CCTGTAGATCCTCCTGCTTCAGAGACCGGTGCTGCA...GTTTTCAGGGTCCTCCCTTCTCTCCCTCTGAGCCTTGGAGCTGTTGCGCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR TCA 90 bp GCAGGCGCAACAGCTCCAAGGCTCAGAGGGAGAGAAGGGAGGACCCTGAAAACATGCAGCACCGGTCTCTaGAGCAGGAGGATCTACAGG +
Preference number: 4 (lower is better)
Translates to: AGATAPRLRGREGRTLKTCSTGL*SRRIYR
Trigger: CCTGTAGATCCTCCTGCTTCAGAGACCGGTGCTGCA...TGTTTTCAGGGTCCTCCCTTCTCTCCCTCTGAGCCTTGGAGCTGTTGCGCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR TCA 90 bp ACGAGTGCACATCTCTTGACCAGAAGTCTTTCATCAAGCAGCAGCGAGGGGGTCCCAACGTGGGTGCCCTaGAGAGGGGCCACCAAGACG +
Preference number: 4 (lower is better)
Translates to: TSAHLLTRSLSSSSSEGVPTWVP*RGATKT
Trigger: CGTCTTGGTGGCCCCTCTTCAGGGCACCCACGTTGG...GACCCCCTCGCTGCTGCTTGATGAAAGACTTCTGGTCAAGAGATGTGCACTCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR TCA 90 bp TCTCTTGACCAGAAGTCTTTCATCAAGCAGCAGCGAGGGGGTCTGCAGAGAGGAACCCGCCCTGGCCTCTaGAGGGAGCCTCCTCGATCA +
Preference number: 4 (lower is better)
Translates to: SLDQKSFIKQQRGGLQRGTRPGL*REPPRS
Trigger: TGATCGAGGAGGCTCCCTTCAGAGGCCAGGGCGGGT...TCCTCTCTGCAGACCCCCTCGCTGCTGCTTGATGAAAGACTTCTGGTCAAGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR TCA 90 bp CCTGAAAACAATTTGGGTGTGCACCCACACCTCTGCCCAGAGGCCTCAGTTGCTGGTGTGGAGCTGCTGTaGGCTGTCCTCCTCCGAGTC +
Preference number: 4 (lower is better)
Translates to: PENNLGVHPHLCPEASVAGVELL*AVLLRV
Trigger: GACTCGGAGGAGGACAGCTCACAGCAGCTCCACACC...AGCAACTGAGGCCTCTGGGCAGAGGTGTGGGTGCACACCCAAATTGTTTTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR TCA 90 bp AATGACAACCGGCCCATCTTTCTGCAGAGCAGCTATGAGGCCAGCGTCCCTGAGTGCCTGAAACCCAATTaGGAGCCCTCCCCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: NDNRPIFLQSSYEASVPECLKPN*EPSPSW
Trigger: CCAGGAGGGGGAGGGCTCTCAATTGGGTTTCAGGCA...CTCAGGGACGCTGGCCTCATAGCTGCTCTGCAGAAAGATGGGCCGGTTGTCATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR TCA 90 bp AGCAGCGAGGGGGTCTGCAGAGAGGAAGGTGCTCTTCTGAGGATCATCTTTGGGCCCTGGCCTGGTGCCTaGAACCCAATTGAGAGCCCT +
Preference number: 4 (lower is better)
Translates to: SSEGVCREEGALLRIIFGPWPGA*NPIESP
Trigger: AGGGCTCTCAATTGGGTTTCAGGCACCAGGCCAGGG...CCCAAAGATGATCCTCAGAAGAGCACCTTCCTCTCTGCAGACCCCCTCGCTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR TCA 90 bp TCTCTTGACCAGAAGTCTTTCATCAAGCAGCAGCGAGGGGGTCTGCAGAGAGGAAGCCACACACGGCCCTaGGGGCACATGCTCAGTGGC +
Preference number: 4 (lower is better)
Translates to: SLDQKSFIKQQRGGLQRGSHTRP*GHMLSG
Trigger: GCCACTGAGCATGTGCCCTCAGGGCCGTGTGTGGCT...TCCTCTCTGCAGACCCCCTCGCTGCTGCTTGATGAAAGACTTCTGGTCAAGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR TCA 90 bp ACGAGTGCACATCTCTTGACCAGAAGTCTTTCATCAAGCAGCAGCGAGGGGGTCAGCCACACACGGCCCTaGGGGCACATGCTCAGTGGC +
Preference number: 4 (lower is better)
Translates to: TSAHLLTRSLSSSSSEGVSHTRP*GHMLSG
Trigger: GCCACTGAGCATGTGCCCTCAGGGCCGTGTGTGGCT...GACCCCCTCGCTGCTGCTTGATGAAAGACTTCTGGTCAAGAGATGTGCACTCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR TCA 90 bp AATGACAACCGGCCCATCTTTCTGCAGAGCAGCTATGAGGCCAGCGTCCCTGAGGCCCATCCAGGTGTTTaGCCCAGGTGCTATACCCGC +
Preference number: 4 (lower is better)
Translates to: NDNRPIFLQSSYEASVPEAHPGV*PRCYTR
Trigger: GCGGGTATAGCACCTGGGTCAAACACCTGGATGGGC...CTCAGGGACGCTGGCCTCATAGCTGCTCTGCAGAAAGATGGGCCGGTTGTCATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp GACACACCCAGGCTGGGCCACGCTTCACTCTGTACACAGAAGCCTCATACTTCTGGGGTCAGTTGCCTCTaGAAGGGTCCCGGGAGTGAC +
Preference number: 4 (lower is better)
Translates to: DTPRLGHASLCTQKPHTSGVSCL*KGPGSD
Trigger: GTCACTCCCGGGACCCTTGCAGAGGCAACTGACCCC...AGAAGTATGAGGCTTCTGTGTACAGAGTGAAGCGTGGCCCAGCCTGGGTGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp CTTCATGGGGTTGCTGTGAGGACTGAATGGGTTAGAAGAATGGCTGGCACATGGGGGGAGGGGGTCAGTTaGCTCTGCAAGGGTCCCGGG +
Preference number: 4 (lower is better)
Translates to: LHGVAVRTEWVRRMAGTWGEGVS*LCKGPG
Trigger: CCCGGGACCCTTGCAGAGGCAACTGACCCCCTCCCC...CCATGTGCCAGCCATTCTTCTAACCCATTCAGTCCTCACAGCAACCCCATGAAG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp AGCAGGCGCAACAGCTCCAAGGCTCAGAGGGAGAGAAGGGAGGACCCTGAAAACCGGCTGCCAAGACCATaGTTGGAGAGCCCTGTTTGC +
Preference number: 4 (lower is better)
Translates to: SRRNSSKAQRERREDPENRLPRP*LESPVC
Trigger: GCAAACAGGGCTCTCCAAGCATGGTCTTGGCAGCCG...GTTTTCAGGGTCCTCCCTTCTCTCCCTCTGAGCCTTGGAGCTGTTGCGCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp AGCAGGCGCAACAGCTCCAAGGCTCAGAGGGAGAGAAGGGAGGACCCTGAAAACGGCCACCAAGACGGCTaGCAAGACCATGCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: SRRNSSKAQRERREDPENGHQDG*QDHAWR
Trigger: TCTCCAAGCATGGTCTTGGCAGCCGTCTTGGTGGCC...GTTTTCAGGGTCCTCCCTTCTCTCCCTCTGAGCCTTGGAGCTGTTGCGCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp GCAGGCGCAACAGCTCCAAGGCTCAGAGGGAGAGAAGGGAGGACCCTGAAAACAGGCATCACCTCCAGCTaGTGGAAATGCCCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: AGATAPRLRGREGRTLKTGITSS*WKCPAS
Trigger: AGAGGCAGGGCATTTCCAGCAGCTGGAGGTGATGCC...TGTTTTCAGGGTCCTCCCTTCTCTCCCTCTGAGCCTTGGAGCTGTTGCGCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp GCAGGCGCAACAGCTCCAAGGCTCAGAGGGAGAGAAGGGAGGACCCTGAAAACAATCCAGCCTAGGATTTaGAGGGAGGCCCCAGGGGAA +
Preference number: 4 (lower is better)
Translates to: AGATAPRLRGREGRTLKTIQPRI*REAPGE
Trigger: TTCCCCTGGGGCCTCCCTGCAAATCCTAGGCTGGAT...TGTTTTCAGGGTCCTCCCTTCTCTCCCTCTGAGCCTTGGAGCTGTTGCGCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp AATGACAACCGGCCCATCTTTCTGCAGAGCAGCTATGAGGCCAGCGTCCCTGAGTGTGGGCCCCCAGGTTaGAGAGCTGAGGATAGGGCT +
Preference number: 4 (lower is better)
Translates to: NDNRPIFLQSSYEASVPECGPPG*RAEDRA
Trigger: AGCCCTATCCTCAGCTCTGCAACCTGGGGGCCCACA...CTCAGGGACGCTGGCCTCATAGCTGCTCTGCAGAAAGATGGGCCGGTTGTCATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp CCTGAAAACAATTTGGGTGTGCACCCACACCTCTGCCCAGAGGCCTCAGTTGCTCGCTGCTCTGGAAGGTaGTGTGGGGAAAGGGGGACC +
Preference number: 4 (lower is better)
Translates to: PENNLGVHPHLCPEASVARCSGR*CGERGT
Trigger: GGTCCCCCTTTCCCCACAGCACCTTCCAGAGCAGCG...AGCAACTGAGGCCTCTGGGCAGAGGTGTGGGTGCACACCCAAATTGTTTTCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp GACACACCCAGGCTGGGCCACGCTTCACTCTGTACACAGAAGCCTCATACTTCTAAGGCCACAGCATCTTaGAGGCAGGTGGCCCGTGGC +
Preference number: 4 (lower is better)
Translates to: DTPRLGHASLCTQKPHTSKATAS*RQVARG
Trigger: GCCACGGGCCACCTGCCTGCAAGATGCTGTGGCCTT...AGAAGTATGAGGCTTCTGTGTACAGAGTGAAGCGTGGCCCAGCCTGGGTGTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp CCACAGATAGCATCCCTAGTGTGGGCAGGACTTGGGACCCCACAGCTGTCCTGGAAGTCACAGGAAGTGTaGCCCTCTCTCAGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: PQIASLVWAGLGTPQLSWKSQEV*PSLRQL
Trigger: CAGCTGCCTGAGAGAGGGGCACACTTCCTGTGACTT...CCAGGACAGCTGTGGGGTCCCAAGTCCTGCCCACACTAGGGATGCTATCTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp AGCAGGCGCAACAGCTCCAAGGCTCAGAGGGAGAGAAGGGAGGACCCTGAAAACCGGTGCCCGGGAGTGTaGAAAGTCACAGGAAGTGTG +
Preference number: 4 (lower is better)
Translates to: SRRNSSKAQRERREDPENRCPGV*KVTGSV
Trigger: CACACTTCCTGTGACTTTGCACACTCCCGGGCACCG...GTTTTCAGGGTCCTCCCTTCTCTCCCTCTGAGCCTTGGAGCTGTTGCGCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp ACGAGTGCACATCTCTTGACCAGAAGTCTTTCATCAAGCAGCAGCGAGGGGGTCGGAGTGGAGGACAGCTaGCCTTCCAGCGGGGCCCAT +
Preference number: 4 (lower is better)
Translates to: TSAHLLTRSLSSSSSEGVGVEDS*PSSGAH
Trigger: ATGGGCCCCGCTGGAAGGGCAGCTGTCCTCCACTCC...GACCCCCTCGCTGCTGCTTGATGAAAGACTTCTGGTCAAGAGATGTGCACTCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp CCTCTGCCCACCCTTCAAATTTGGGACCTGACCAAAGTGTTTAACCCTCGCGTTGGCTCTGCTGTGCCCTaGAGCCCTCGGTCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: PLPTLQIWDLTKVFNPRVGSAVP*SPRSAW
Trigger: CCAGGCTGACCGAGGGCTGCAGGGCACAGCAGAGCC...AACGCGAGGGTTAAACACTTTGGTCAGGTCCCAAATTTGAAGGGTGGGCAGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441508.4
CDS-3UTR CCA 90 bp CTTCATGGGGTTGCTGTGAGGACTGAATGGGTTAGAAGAATGGCTGGCACATGGACGGTGGGCCGGCCATaGCGGAAGCTGTGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: LHGVAVRTEWVRRMAGTWTVGRP*RKLCRE
Trigger: CTCCCTGCACAGCTTCCGCCATGGCCGGCCCACCGT...CCATGTGCCAGCCATTCTTCTAACCCATTCAGTCCTCACAGCAACCCCATGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp TGCTATACCCGCCAGTCCCTGACAGCAGTTGGCTTTTTGCTCTTAGTACCTGTAGCTGTCGAGGGACGGTaGGCCGGCCATGGCGGAAGC +
Preference number: 4 (lower is better)
Translates to: CYTRQSLTAVGFLLLVPVAVEGR*AGHGGS
Trigger: GCTTCCGCCATGGCCGGCCCACCGTCCCTCGACAGC...TACAGGTACTAAGAGCAAAAAGCCAACTGCTGTCAGGGACTGGCGGGTATAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp CCACAGATAGCATCCCTAGTGTGGGCAGGACTTGGGACCCCACAGCTGTCCTGGAGACCTAGGGGGATGTaGGGGCATGTTTGTGGACAC +
Preference number: 4 (lower is better)
Translates to: PQIASLVWAGLGTPQLSWRPRGM*GHVCGH
Trigger: GTGTCCACAAACATGCCCCCACATCCCCCTAGGTCT...CCAGGACAGCTGTGGGGTCCCAAGTCCTGCCCACACTAGGGATGCTATCTGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp AGCAGGCGCAACAGCTCCAAGGCTCAGAGGGAGAGAAGGGAGGACCCTGAAAACGTGTCCCAGACTGCTTaGGCCACTGTCTTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: SRRNSSKAQRERREDPENVSQTA*ATVFLQ
Trigger: CTGCAGGAAGACAGTGGCCCAAGCAGTCTGGGACAC...GTTTTCAGGGTCCTCCCTTCTCTCCCTCTGAGCCTTGGAGCTGTTGCGCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp AATGACAACCGGCCCATCTTTCTGCAGAGCAGCTATGAGGCCAGCGTCCCTGAGCCAGGTTGTACCCTGTaGAGCCTCAGGCCAAAGGCC +
Preference number: 4 (lower is better)
Translates to: NDNRPIFLQSSYEASVPEPGCTL*SLRPKA
Trigger: GGCCTTTGGCCTGAGGCTCCACAGGGTACAACCTGG...CTCAGGGACGCTGGCCTCATAGCTGCTCTGCAGAAAGATGGGCCGGTTGTCATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp AGCAGCGAGGGGGTCTGCAGAGAGGAAGGTGCTCTTCTGAGGATCATCTTTGGGCTGGGCTTTGGCACCTaGAGGGCAAGGCTTCTGTGG +
Preference number: 4 (lower is better)
Translates to: SSEGVCREEGALLRIIFGLGFGT*RARLLW
Trigger: CCACAGAAGCCTTGCCCTCCAGGTGCCAAAGCCCAG...CCCAAAGATGATCCTCAGAAGAGCACCTTCCTCTCTGCAGACCCCCTCGCTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp AATGACAACCGGCCCATCTTTCTGCAGAGCAGCTATGAGGCCAGCGTCCCTGAGTCCTCCGAGTCCAGGTaGCATCACCTCCAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: NDNRPIFLQSSYEASVPESSESR*HHLQLL
Trigger: CAGCAGCTGGAGGTGATGCCACCTGGACTCGGAGGA...CTCAGGGACGCTGGCCTCATAGCTGCTCTGCAGAAAGATGGGCCGGTTGTCATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp TTCCTGCAGCCTGCAGCACCGGTCTCTGAAGCAGGAGGATCTACAGGTAGACCTTCCCTGGGTGAGGTGTaGAGCTGCTGTGAGCTGTCC +
Preference number: 4 (lower is better)
Translates to: FLQPAAPVSEAGGSTGRPSLGEV*SCCELS
Trigger: GGACAGCTCACAGCAGCTCCACACCTCACCCAGGGA...AGGTCTACCTGTAGATCCTCCTGCTTCAGAGACCGGTGCTGCAGGCTGCAGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp CCACAGATAGCATCCCTAGTGTGGGCAGGACTTGGGACCCCACAGCTGTCCTGGATAGCATCCCTAGTGTaGGCAGGACTTGGGACCCCA +
Preference number: 4 (lower is better)
Translates to: PQIASLVWAGLGTPQLSWIASLV*AGLGTP
Trigger: TGGGGTCCCAAGTCCTGCCCACACTAGGGATGCTAT...CCAGGACAGCTGTGGGGTCCCAAGTCCTGCCCACACTAGGGATGCTATCTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp AGCAGGCGCAACAGCTCCAAGGCTCAGAGGGAGAGAAGGGAGGACCCTGAAAACTTTGTGGTGGGATCCTaGCCAGCTGACTGGGACAGG +
Preference number: 4 (lower is better)
Translates to: SRRNSSKAQRERREDPENFVVGS*PADWDR
Trigger: CCTGTCCCAGTCAGCTGGCCAGGATCCCACCACAAA...GTTTTCAGGGTCCTCCCTTCTCTCCCTCTGAGCCTTGGAGCTGTTGCGCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp GGCCACGCTTCACTCTGTACACAGAAGCCTCATACTTCTGTGCACAGAACTGGGTCCTGCCTCAGAGGGTaGGGACACACCCAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: GHASLCTQKPHTSVHRTGSCLRG*GHTQAG
Trigger: CCCAGCCTGGGTGTGTCCCCACCCTCTGAGGCAGGA...CCCAGTTCTGTGCACAGAAGTATGAGGCTTCTGTGTACAGAGTGAAGCGTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp ACGAGTGCACATCTCTTGACCAGAAGTCTTTCATCAAGCAGCAGCGAGGGGGTCTCCTGCCTCAGAGGGTaGGGACACACCCAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: TSAHLLTRSLSSSSSEGVSCLRG*GHTQAG
Trigger: CCCAGCCTGGGTGTGTCCCCACCCTCTGAGGCAGGA...GACCCCCTCGCTGCTGCTTGATGAAAGACTTCTGGTCAAGAGATGTGCACTCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp AGCAGCGAGGGGGTCTGCAGAGAGGAAGGTGCTCTTCTGAGGATCATCTTTGGGCTTTCACAGAGCCCTTaGCCGAGGCTCCCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: SSEGVCREEGALLRIIFGLSQSP*PRLPSW
Trigger: CCAAGAGGGGAGCCTCGGCCAAGGGCTCTGTGAAAG...CCCAAAGATGATCCTCAGAAGAGCACCTTCCTCTCTGCAGACCCCCTCGCTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp ACGAGTGCACATCTCTTGACCAGAAGTCTTTCATCAAGCAGCAGCGAGGGGGTCCCATCCCAGGGAGTGTaGGCCCCCAGGTTGCAGAGC +
Preference number: 4 (lower is better)
Translates to: TSAHLLTRSLSSSSSEGVPSQGV*APRLQS
Trigger: GCTCTGCAACCTGGGGGCCCACACTCCCTGGGATGG...GACCCCCTCGCTGCTGCTTGATGAAAGACTTCTGGTCAAGAGATGTGCACTCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp AGCAGCGAGGGGGTCTGCAGAGAGGAAGGTGCTCTTCTGAGGATCATCTTTGGGAGGGCACATGCTCAGTaGCACCAGAGGCGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: SSEGVCREEGALLRIIFGRAHAQ*HQRRKQ
Trigger: CTGCTTCCGCCTCTGGTGCCACTGAGCATGTGCCCT...CCCAAAGATGATCCTCAGAAGAGCACCTTCCTCTCTGCAGACCCCCTCGCTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp ACGAGTGCACATCTCTTGACCAGAAGTCTTTCATCAAGCAGCAGCGAGGGGGTCAACAGGGCACCTCTCTaGCCGGTGCCCGGGAGTGTG +
Preference number: 4 (lower is better)
Translates to: TSAHLLTRSLSSSSSEGVNRAPL*PVPGSV
Trigger: CACACTCCCGGGCACCGGCCAGAGAGGTGCCCTGTT...GACCCCCTCGCTGCTGCTTGATGAAAGACTTCTGGTCAAGAGATGTGCACTCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp AATGACAACCGGCCCATCTTTCTGCAGAGCAGCTATGAGGCCAGCGTCCCTGAGCCGTCCGGAGCTCCGTaGAGAGGTCTTCTCAGCTGT +
Preference number: 4 (lower is better)
Translates to: NDNRPIFLQSSYEASVPEPSGAP*RGLLSC
Trigger: ACAGCTGAGAAGACCTCTCCACGGAGCTCCGGACGG...CTCAGGGACGCTGGCCTCATAGCTGCTCTGCAGAAAGATGGGCCGGTTGTCATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441508.4
CDS-3UTR TCA 90 bp TGCTATACCCGCCAGTCCCTGACAGCAGTTGGCTTTTTGCTCTTAGTACCTGTATGCAGGCCAGGGCGATaGGCATGGGGAGGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: CYTRQSLTAVGFLLLVPVCRPGR*AWGGGQ
Trigger: CTGACCCCCTCCCCATGCTCATCGCCCTGGCCTGCA...TACAGGTACTAAGAGCAAAAAGCCAACTGCTGTCAGGGACTGGCGGGTATAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR TCA 90 bp AATGACAACCGGCCCATCTTTCTGCAGAGCAGCTATGAGGCCAGCGTCCCTGAGGCTTGCAGAGCGTCATaGACAGCAGACAGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: NDNRPIFLQSSYEASVPEACRAS*TADRWP
Trigger: TGGCCACCTGTCTGCTGTTCATGACGCTCTGCAAGC...CTCAGGGACGCTGGCCTCATAGCTGCTCTGCAGAAAGATGGGCCGGTTGTCATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR TCA 90 bp TTCCTGCAGCCTGCAGCACCGGTCTCTGAAGCAGGAGGATCTACAGGTAGACCTGCTTGCAGAGCGTCATaGACAGCAGACAGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: FLQPAAPVSEAGGSTGRPACRAS*TADRWP
Trigger: TGGCCACCTGTCTGCTGTTCATGACGCTCTGCAAGC...AGGTCTACCTGTAGATCCTCCTGCTTCAGAGACCGGTGCTGCAGGCTGCAGGAA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR TCA 90 bp TTCCTGCAGCCTGCAGCACCGGTCTCTGAAGCAGGAGGATCTACAGGTAGACCTGAGCCCAGAAAGCCCTaGGGATTTGCGAGAGTGTGG +
Preference number: 4 (lower is better)
Translates to: FLQPAAPVSEAGGSTGRPEPRKP*GFARVW
Trigger: CCACACTCTCGCAAATCCTCAGGGCTTTCTGGGCTC...AGGTCTACCTGTAGATCCTCCTGCTTCAGAGACCGGTGCTGCAGGCTGCAGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR TCA 90 bp AGCAGCGAGGGGGTCTGCAGAGAGGAAGGTGCTCTTCTGAGGATCATCTTTGGGTTCCCGGAAAGGAGTTaGGAAGAGAGCCAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: SSEGVCREEGALLRIIFGFPERS*EESQGP
Trigger: TGGGCCCTGGCTCTCTTCTCAACTCCTTTCCGGGAA...CCCAAAGATGATCCTCAGAAGAGCACCTTCCTCTCTGCAGACCCCCTCGCTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp ACGAGTGCACATCTCTTGACCAGAAGTCTTTCATCAAGCAGCAGCGAGGGGGTCGGGGTCAGTTGCCTCTaGAAGGGTCCCGGGAGTGAC +
Preference number: 4 (lower is better)
Translates to: TSAHLLTRSLSSSSSEGVGVSCL*KGPGSD
Trigger: GTCACTCCCGGGACCCTTGCAGAGGCAACTGACCCC...GACCCCCTCGCTGCTGCTTGATGAAAGACTTCTGGTCAAGAGATGTGCACTCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp TGCTATACCCGCCAGTCCCTGACAGCAGTTGGCTTTTTGCTCTTAGTACCTGTAGGGGAGGGGGTCAGTTaGCTCTGCAAGGGTCCCGGG +
Preference number: 4 (lower is better)
Translates to: CYTRQSLTAVGFLLLVPVGEGVS*LCKGPG
Trigger: CCCGGGACCCTTGCAGAGGCAACTGACCCCCTCCCC...TACAGGTACTAAGAGCAAAAAGCCAACTGCTGTCAGGGACTGGCGGGTATAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp TCTCTTGACCAGAAGTCTTTCATCAAGCAGCAGCGAGGGGGTCTGCAGAGAGGACCATGGCGGAAGCTGTaGAGGGAGAGGCGCAAGGAG +
Preference number: 4 (lower is better)
Translates to: SLDQKSFIKQQRGGLQRGPWRKL*RERRKE
Trigger: CTCCTTGCGCCTCTCCCTGCACAGCTTCCGCCATGG...TCCTCTCTGCAGACCCCCTCGCTGCTGCTTGATGAAAGACTTCTGGTCAAGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp GGCCACGCTTCACTCTGTACACAGAAGCCTCATACTTCTGTGCACAGAACTGGGTGTAGTCACAGTGGCTaGGGTTGTCCTCGGGGCCCG +
Preference number: 4 (lower is better)
Translates to: GHASLCTQKPHTSVHRTGCSHSG*GCPRGP
Trigger: CGGGCCCCGAGGACAACCGCAGCCACTGTGACTACA...CCCAGTTCTGTGCACAGAAGTATGAGGCTTCTGTGTACAGAGTGAAGCGTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp TTCCTGCAGCCTGCAGCACCGGTCTCTGAAGCAGGAGGATCTACAGGTAGACCTAGCAGCGAGGGGGTCTaGAGAGAGGAAGGTGCTCTT +
Preference number: 4 (lower is better)
Translates to: FLQPAAPVSEAGGSTGRPSSEGV*REEGAL
Trigger: AAGAGCACCTTCCTCTCTGCAGACCCCCTCGCTGCT...AGGTCTACCTGTAGATCCTCCTGCTTCAGAGACCGGTGCTGCAGGCTGCAGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp TCTCTTGACCAGAAGTCTTTCATCAAGCAGCAGCGAGGGGGTCTGCAGAGAGGAAGGGCACCAGGCAGATaGTGGCAGCACCCGGGAAAC +
Preference number: 4 (lower is better)
Translates to: SLDQKSFIKQQRGGLQRGRAPGR*WQHPGN
Trigger: GTTTCCCGGGTGCTGCCAGCATCTGCCTGGTGCCCT...TCCTCTCTGCAGACCCCCTCGCTGCTGCTTGATGAAAGACTTCTGGTCAAGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp GCAGGCGCAACAGCTCCAAGGCTCAGAGGGAGAGAAGGGAGGACCCTGAAAACAAAATGCCCTGCCTCTTaGCACTCTGTCACAGCACCC +
Preference number: 4 (lower is better)
Translates to: AGATAPRLRGREGRTLKTKCPAS*HSVTAP
Trigger: GGGTGCTGTGACAGAGTGGCAAGAGGCAGGGCATTT...TGTTTTCAGGGTCCTCCCTTCTCTCCCTCTGAGCCTTGGAGCTGTTGCGCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp AATGACAACCGGCCCATCTTTCTGCAGAGCAGCTATGAGGCCAGCGTCCCTGAGGGCATCACCTCCAGCTaGTGGAAATGCCCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: NDNRPIFLQSSYEASVPEGITSS*WKCPAS
Trigger: AGAGGCAGGGCATTTCCAGCAGCTGGAGGTGATGCC...CTCAGGGACGCTGGCCTCATAGCTGCTCTGCAGAAAGATGGGCCGGTTGTCATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp ATGACCACGAGTGCACATCTCTTGACCAGAAGTCTTTCATCAAGCAGCAGCGAGCACCCTCGGGGAGGCTaGCGCTTTCCCTGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: MTTSAHLLTRSLSSSSSEHPRGG*RFPWVR
Trigger: CCTCACCCAGGGAAAGCGGCAGCCTCCCCGAGGGTG...CTCGCTGCTGCTTGATGAAAGACTTCTGGTCAAGAGATGTGCACTCGTGGTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp AATGACAACCGGCCCATCTTTCTGCAGAGCAGCTATGAGGCCAGCGTCCCTGAGGAGGGCACTGCACACTaGGCTGAGGAGCTTTGGCTA +
Preference number: 4 (lower is better)
Translates to: NDNRPIFLQSSYEASVPEEGTAH*AEELWL
Trigger: TAGCCAAAGCTCCTCAGCGCAGTGTGCAGTGCCCTC...CTCAGGGACGCTGGCCTCATAGCTGCTCTGCAGAAAGATGGGCCGGTTGTCATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp GACAGAAGCGTGGGAGGCTGGCAATGCTCCCCTCCCTGCATCGGGACCAGGAGGGACAAAAAGGACCCATaGTGCCAAGAGAATGTTCCT +
Preference number: 4 (lower is better)
Translates to: DRSVGGWQCSPPCIGTRRDKKDP*CQENVP
Trigger: AGGAACATTCTCTTGGCAGCATGGGTCCTTTTTGTC...CCTCCTGGTCCCGATGCAGGGAGGGGAGCATTGCCAGCCTCCCACGCTTCTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp CCACAGATAGCATCCCTAGTGTGGGCAGGACTTGGGACCCCACAGCTGTCCTGGAAAGCCCTGAGGATTTaGGAGAGTGTGGTGGCTAGC +
Preference number: 4 (lower is better)
Translates to: PQIASLVWAGLGTPQLSWKALRI*ESVVAS
Trigger: GCTAGCCACCACACTCTCGCAAATCCTCAGGGCTTT...CCAGGACAGCTGTGGGGTCCCAAGTCCTGCCCACACTAGGGATGCTATCTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp ATGACCACGAGTGCACATCTCTTGACCAGAAGTCTTTCATCAAGCAGCAGCGAGCAGGGAATCTGGGCCTaGCCACTGGGGCAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: MTTSAHLLTRSLSSSSSEQGIWA*PLGQAP
Trigger: GGGAGCCTGCCCCAGTGGGCAGGCCCAGATTCCCTG...CTCGCTGCTGCTTGATGAAAGACTTCTGGTCAAGAGATGTGCACTCGTGGTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp CCTGAAAACAATTTGGGTGTGCACCCACACCTCTGCCCAGAGGCCTCAGTTGCTTGTGGGCCCCCAGGTTaGAGAGCTGAGGATAGGGCT +
Preference number: 4 (lower is better)
Translates to: PENNLGVHPHLCPEASVACGPPG*RAEDRA
Trigger: AGCCCTATCCTCAGCTCTGCAACCTGGGGGCCCACA...AGCAACTGAGGCCTCTGGGCAGAGGTGTGGGTGCACACCCAAATTGTTTTCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp CCTCTGCCCACCCTTCAAATTTGGGACCTGACCAAAGTGTTTAACCCTCGCGTTCCAGGGTGGGTCCGCTaGTCTGGAAGGTGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: PLPTLQIWDLTKVFNPRVPGWVR*SGRCCG
Trigger: CCCACAGCACCTTCCAGAGCAGCGGACCCACCCTGG...AACGCGAGGGTTAAACACTTTGGTCAGGTCCCAAATTTGAAGGGTGGGCAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp GCAGGCGCAACAGCTCCAAGGCTCAGAGGGAGAGAAGGGAGGACCCTGAAAACAACCGGCCCATCTTTCTaGAGAGCAGCTATGAGGCCA +
Preference number: 4 (lower is better)
Translates to: AGATAPRLRGREGRTLKTTGPSF*RAAMRP
Trigger: TGGCCTCATAGCTGCTCTGCAGAAAGATGGGCCGGT...TGTTTTCAGGGTCCTCCCTTCTCTCCCTCTGAGCCTTGGAGCTGTTGCGCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp AATGACAACCGGCCCATCTTTCTGCAGAGCAGCTATGAGGCCAGCGTCCCTGAGCGGTGCCCGGGAGTGTaGAAAGTCACAGGAAGTGTG +
Preference number: 4 (lower is better)
Translates to: NDNRPIFLQSSYEASVPERCPGV*KVTGSV
Trigger: CACACTTCCTGTGACTTTGCACACTCCCGGGCACCG...CTCAGGGACGCTGGCCTCATAGCTGCTCTGCAGAAAGATGGGCCGGTTGTCATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp TCTCTTGACCAGAAGTCTTTCATCAAGCAGCAGCGAGGGGGTCTGCAGAGAGGACACCTCTCTGGCCGGTaGCCGGGAGTGTGCAAAGTC +
Preference number: 4 (lower is better)
Translates to: SLDQKSFIKQQRGGLQRGHLSGR*PGVCKV
Trigger: GACTTTGCACACTCCCGGGCACCGGCCAGAGAGGTG...TCCTCTCTGCAGACCCCCTCGCTGCTGCTTGATGAAAGACTTCTGGTCAAGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp AGGCTAGGGCAGATGGGGCGGAACAGGGCACCTCTCTGGCCGGTGCCCGGGAGTCTTAGTACCTGTATCTaGATCCTAAATTTGCCACGA +
Preference number: 4 (lower is better)
Translates to: RLGQMGRNRAPLWPVPGSLSTCI*ILNLPR
Trigger: TCGTGGCAAATTTAGGATGCAGATACAGGTACTAAG...ACTCCCGGGCACCGGCCAGAGAGGTGCCCTGTTCCGCCCCATCTGCCCTAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp TCTCTTGACCAGAAGTCTTTCATCAAGCAGCAGCGAGGGGGTCTGCAGAGAGGAGAAAGGGCGCTGGCCTaGGCATGCAAGGAGCTTCGG +
Preference number: 4 (lower is better)
Translates to: SLDQKSFIKQQRGGLQRGERALA*ACKELR
Trigger: CCGAAGCTCCTTGCATGCCCAGGCCAGCGCCCTTTC...TCCTCTCTGCAGACCCCCTCGCTGCTGCTTGATGAAAGACTTCTGGTCAAGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp GACACACCCAGGCTGGGCCACGCTTCACTCTGTACACAGAAGCCTCATACTTCTTTTGGGAAAGGGCGCTaGCCTGGGCATGCAAGGAGC +
Preference number: 4 (lower is better)
Translates to: DTPRLGHASLCTQKPHTSFGKGR*PGHARS
Trigger: GCTCCTTGCATGCCCAGGCCAGCGCCCTTTCCCAAA...AGAAGTATGAGGCTTCTGTGTACAGAGTGAAGCGTGGCCCAGCCTGGGTGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp AGCAGGCGCAACAGCTCCAAGGCTCAGAGGGAGAGAAGGGAGGACCCTGAAAACTCTGAGGATCATCTTTaGGAAAGGGCGCTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: SRRNSSKAQRERREDPENSEDHL*ERALAW
Trigger: CCAGGCCAGCGCCCTTTCCCAAAGATGATCCTCAGA...GTTTTCAGGGTCCTCCCTTCTCTCCCTCTGAGCCTTGGAGCTGTTGCGCCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp CCTGAAAACAATTTGGGTGTGCACCCACACCTCTGCCCAGAGGCCTCAGTTGCTCTCCATGCTGGGCTTTaGCACCTGGAGGGCAAGGCT +
Preference number: 4 (lower is better)
Translates to: PENNLGVHPHLCPEASVALHAGL*HLEGKA
Trigger: AGCCTTGCCCTCCAGGTGCCAAAGCCCAGCATGGAG...AGCAACTGAGGCCTCTGGGCAGAGGTGTGGGTGCACACCCAAATTGTTTTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp GGCCACGCTTCACTCTGTACACAGAAGCCTCATACTTCTGTGCACAGAACTGGGGCCAGGACAGTGTCTTaGCCCCGGTGTAGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: GHASLCTQKPHTSVHRTGARTVS*PRCRLS
Trigger: GCTCAGCCTACACCGGGGCCAAGACACTGTCCTGGC...CCCAGTTCTGTGCACAGAAGTATGAGGCTTCTGTGTACAGAGTGAAGCGTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp AGCAGGCGCAACAGCTCCAAGGCTCAGAGGGAGAGAAGGGAGGACCCTGAAAACATCACCTCCAGCTGCTaGAAATGCCCTGCCTCTTGC +
Preference number: 4 (lower is better)
Translates to: SRRNSSKAQRERREDPENITSSC*KCPASC
Trigger: GCAAGAGGCAGGGCATTTCCAGCAGCTGGAGGTGAT...GTTTTCAGGGTCCTCCCTTCTCTCCCTCTGAGCCTTGGAGCTGTTGCGCCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp TTCCTGCAGCCTGCAGCACCGGTCTCTGAAGCAGGAGGATCTACAGGTAGACCTAAGCCCATCCTGGGGTaGGACTGCTTTGACGGGTCA +
Preference number: 4 (lower is better)
Translates to: FLQPAAPVSEAGGSTGRPKPILG*DCFDGS
Trigger: TGACCCGTCAAAGCAGTCCCACCCCAGGATGGGCTT...AGGTCTACCTGTAGATCCTCCTGCTTCAGAGACCGGTGCTGCAGGCTGCAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp TTCCTGCAGCCTGCAGCACCGGTCTCTGAAGCAGGAGGATCTACAGGTAGACCTCTGAGAAGCCCATCCTaGGGTGGGACTGCTTTGACG +
Preference number: 4 (lower is better)
Translates to: FLQPAAPVSEAGGSTGRPLRSPS*GGTALT
Trigger: CGTCAAAGCAGTCCCACCCCAGGATGGGCTTCTCAG...AGGTCTACCTGTAGATCCTCCTGCTTCAGAGACCGGTGCTGCAGGCTGCAGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp GACACACCCAGGCTGGGCCACGCTTCACTCTGTACACAGAAGCCTCATACTTCTGGGGCAGCTTTGTGGTaGGATCCTGGCCAGCTGACT +
Preference number: 4 (lower is better)
Translates to: DTPRLGHASLCTQKPHTSGAALW*DPGQLT
Trigger: AGTCAGCTGGCCAGGATCCCACCACAAAGCTGCCCC...AGAAGTATGAGGCTTCTGTGTACAGAGTGAAGCGTGGCCCAGCCTGGGTGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp ACGAGTGCACATCTCTTGACCAGAAGTCTTTCATCAAGCAGCAGCGAGGGGGTCTGGCTGGCTGCACTGTaGGTCACAGCAGGATGGGGG +
Preference number: 4 (lower is better)
Translates to: TSAHLLTRSLSSSSSEGVWLAAL*VTAGWG
Trigger: CCCCCATCCTGCTGTGACCCACAGTGCAGCCAGCCA...GACCCCCTCGCTGCTGCTTGATGAAAGACTTCTGGTCAAGAGATGTGCACTCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp CCTGAAAACAATTTGGGTGTGCACCCACACCTCTGCCCAGAGGCCTCAGTTGCTTTGGGGAGACGTGGCTaGCTGCACTGTGGGTCACAG +
Preference number: 4 (lower is better)
Translates to: PENNLGVHPHLCPEASVALGRRG*LHCGSQ
Trigger: CTGTGACCCACAGTGCAGCCAGCCACGTCTCCCCAA...AGCAACTGAGGCCTCTGGGCAGAGGTGTGGGTGCACACCCAAATTGTTTTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp ACGAGTGCACATCTCTTGACCAGAAGTCTTTCATCAAGCAGCAGCGAGGGGGTCCCAGAGCTCACTCCTTaGGGAGACGTGGCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: TSAHLLTRSLSSSSSEGVPELTP*GDVAGC
Trigger: GCAGCCAGCCACGTCTCCCCAAGGAGTGAGCTCTGG...GACCCCCTCGCTGCTGCTTGATGAAAGACTTCTGGTCAAGAGATGTGCACTCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp CCTGAAAACAATTTGGGTGTGCACCCACACCTCTGCCCAGAGGCCTCAGTTGCTGGGACACACCCAGGCTaGGCCACGCTTCACTCTGTA +
Preference number: 4 (lower is better)
Translates to: PENNLGVHPHLCPEASVAGTHPG*ATLHSV
Trigger: TACAGAGTGAAGCGTGGCCCAGCCTGGGTGTGTCCC...AGCAACTGAGGCCTCTGGGCAGAGGTGTGGGTGCACACCCAAATTGTTTTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp TCTCTTGACCAGAAGTCTTTCATCAAGCAGCAGCGAGGGGGTCTGCAGAGAGGAGCCAAACAGGGAATCTaGGCCTGCCCACTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: SLDQKSFIKQQRGGLQRGAKQGI*ACPLGQ
Trigger: CTGCCCCAGTGGGCAGGCCCAGATTCCCTGTTTGGC...TCCTCTCTGCAGACCCCCTCGCTGCTGCTTGATGAAAGACTTCTGGTCAAGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp ATGACCACGAGTGCACATCTCTTGACCAGAAGTCTTTCATCAAGCAGCAGCGAGGCCTCAGTTGCTGGGTaGGGAGGGAGGCCCGGAGTG +
Preference number: 4 (lower is better)
Translates to: MTTSAHLLTRSLSSSSSEASVAG*GGRPGV
Trigger: CACTCCGGGCCTCCCTCCCCACCCAGCAACTGAGGC...CTCGCTGCTGCTTGATGAAAGACTTCTGGTCAAGAGATGTGCACTCGTGGTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR CAA 72 bp GCTCAGAGGGAGAGAAGGGAGGACCCTGAAAACAATTaGGGTGTGCACCCACACCTCTGCCCAGAGGCCTCA +
Preference number: 4 (lower is better)
Translates to: AQRERREDPENN*GVHPHLCPEAS
Trigger: TGAGGCCTCTGGGCAGAGGTGTGGGTGCACACCCAAATTGTTTTCAGGGTCCTCCCTTCTCTCCCTCTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR TCA 90 bp AGCAGCGAGGGGGTCTGCAGAGAGGAAGGTGCTCTTCTGAGGATCATCTTTGGGCAATCCCTTCCTGATTaGTCCCAACGTGGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: SSEGVCREEGALLRIIFGQSLPD*SQRGCP
Trigger: AGGGCACCCACGTTGGGATCAATCAGGAAGGGATTG...CCCAAAGATGATCCTCAGAAGAGCACCTTCCTCTCTGCAGACCCCCTCGCTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR TCA 90 bp CCACAGATAGCATCCCTAGTGTGGGCAGGACTTGGGACCCCACAGCTGTCCTGGTCTTCAATCCCTTCCTaGTTGATCCCAACGTGGGTG +
Preference number: 4 (lower is better)
Translates to: PQIASLVWAGLGTPQLSWSSIPS*LIPTWV
Trigger: CACCCACGTTGGGATCAATCAGGAAGGGATTGAAGA...CCAGGACAGCTGTGGGGTCCCAAGTCCTGCCCACACTAGGGATGCTATCTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR TCA 90 bp TTCCTGCAGCCTGCAGCACCGGTCTCTGAAGCAGGAGGATCTACAGGTAGACCTACTGGGGAGTCAAAGTaGGGGGCTGGACAATGTCTG +
Preference number: 4 (lower is better)
Translates to: FLQPAAPVSEAGGSTGRPTGESK*GAGQCL
Trigger: CAGACATTGTCCAGCCCCTCACTTTGACTCCCCAGT...AGGTCTACCTGTAGATCCTCCTGCTTCAGAGACCGGTGCTGCAGGCTGCAGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR TCA 90 bp TTCCTGCAGCCTGCAGCACCGGTCTCTGAAGCAGGAGGATCTACAGGTAGACCTATACCCGCCAGTCCCTaGCAGCAGTTGGCTTTTTGC +
Preference number: 4 (lower is better)
Translates to: FLQPAAPVSEAGGSTGRPIPASP*QQLAFC
Trigger: GCAAAAAGCCAACTGCTGTCAGGGACTGGCGGGTAT...AGGTCTACCTGTAGATCCTCCTGCTTCAGAGACCGGTGCTGCAGGCTGCAGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR TCA 90 bp AATGACAACCGGCCCATCTTTCTGCAGAGCAGCTATGAGGCCAGCGTCCCTGAGATACCCGCCAGTCCCTaGCAGCAGTTGGCTTTTTGC +
Preference number: 4 (lower is better)
Translates to: NDNRPIFLQSSYEASVPEIPASP*QQLAFC
Trigger: GCAAAAAGCCAACTGCTGTCAGGGACTGGCGGGTAT...CTCAGGGACGCTGGCCTCATAGCTGCTCTGCAGAAAGATGGGCCGGTTGTCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp AGCAGCGAGGGGGTCTGCAGAGAGGAAGGTGCTCTTCTGAGGATCATCTTTGGGGTGTGTGTCCCAGACTaGTTGGGCCACTGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: SSEGVCREEGALLRIIFGVCVPD*LGHCLP
Trigger: AGGAAGACAGTGGCCCAAGCAGTCTGGGACACACAC...CCCAAAGATGATCCTCAGAAGAGCACCTTCCTCTCTGCAGACCCCCTCGCTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp AGCAGCGAGGGGGTCTGCAGAGAGGAAGGTGCTCTTCTGAGGATCATCTTTGGGAAATGCCCTGCCTCTTaGCACTCTGTCACAGCACCC +
Preference number: 4 (lower is better)
Translates to: SSEGVCREEGALLRIIFGKCPAS*HSVTAP
Trigger: GGGTGCTGTGACAGAGTGGCAAGAGGCAGGGCATTT...CCCAAAGATGATCCTCAGAAGAGCACCTTCCTCTCTGCAGACCCCCTCGCTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp TCTCTTGACCAGAAGTCTTTCATCAAGCAGCAGCGAGGGGGTCTGCAGAGAGGAGGTGAGGTGTGGAGCTaGTGTGAGCTGTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: SLDQKSFIKQQRGGLQRGGEVWS*CELSSS
Trigger: GGAGGAGGACAGCTCACAGCAGCTCCACACCTCACC...TCCTCTCTGCAGACCCCCTCGCTGCTGCTTGATGAAAGACTTCTGGTCAAGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp CTTCATGGGGTTGCTGTGAGGACTGAATGGGTTAGAAGAATGGCTGGCACATGGGAAAGGGCGCTGGCCTaGGCATGCAAGGAGCTTCGG +
Preference number: 4 (lower is better)
Translates to: LHGVAVRTEWVRRMAGTWERALA*ACKELR
Trigger: CCGAAGCTCCTTGCATGCCCAGGCCAGCGCCCTTTC...CCATGTGCCAGCCATTCTTCTAACCCATTCAGTCCTCACAGCAACCCCATGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp TTCCTGCAGCCTGCAGCACCGGTCTCTGAAGCAGGAGGATCTACAGGTAGACCTTCTGAGGATCATCTTTaGGAAAGGGCGCTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: FLQPAAPVSEAGGSTGRPSEDHL*ERALAW
Trigger: CCAGGCCAGCGCCCTTTCCCAAAGATGATCCTCAGA...AGGTCTACCTGTAGATCCTCCTGCTTCAGAGACCGGTGCTGCAGGCTGCAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp TTCCTGCAGCCTGCAGCACCGGTCTCTGAAGCAGGAGGATCTACAGGTAGACCTGCTGCTTCTAGGAGGTaGTTACGAGCCCCAGGTTGT +
Preference number: 4 (lower is better)
Translates to: FLQPAAPVSEAGGSTGRPAASRR*LRAPGC
Trigger: ACAACCTGGGGCTCGTAACCACCTCCTAGAAGCAGC...AGGTCTACCTGTAGATCCTCCTGCTTCAGAGACCGGTGCTGCAGGCTGCAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp ACGAGTGCACATCTCTTGACCAGAAGTCTTTCATCAAGCAGCAGCGAGGGGGTCCTGGGCTTTGGCACCTaGAGGGCAAGGCTTCTGTGG +
Preference number: 4 (lower is better)
Translates to: TSAHLLTRSLSSSSSEGVLGFGT*RARLLW
Trigger: CCACAGAAGCCTTGCCCTCCAGGTGCCAAAGCCCAG...GACCCCCTCGCTGCTGCTTGATGAAAGACTTCTGGTCAAGAGATGTGCACTCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp GGCCACGCTTCACTCTGTACACAGAAGCCTCATACTTCTGTGCACAGAACTGGGAGTGTGGGCAGGACTTaGGACCCCACAGCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: GHASLCTQKPHTSVHRTGSVGRT*DPTAVL
Trigger: CAGGACAGCTGTGGGGTCCCAAGTCCTGCCCACACT...CCCAGTTCTGTGCACAGAAGTATGAGGCTTCTGTGTACAGAGTGAAGCGTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp CCTGAAAACAATTTGGGTGTGCACCCACACCTCTGCCCAGAGGCCTCAGTTGCTAAGCCCATCCTGGGGTaGGACTGCTTTGACGGGTCA +
Preference number: 4 (lower is better)
Translates to: PENNLGVHPHLCPEASVAKPILG*DCFDGS
Trigger: TGACCCGTCAAAGCAGTCCCACCCCAGGATGGGCTT...AGCAACTGAGGCCTCTGGGCAGAGGTGTGGGTGCACACCCAAATTGTTTTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp GAAGGGCCTTTCAGAGTAGCGGGGAGAAAGAGACGTCACAATTTCCCGGAAAGGGGGGCAGCTTTGTGGTaGGATCCTGGCCAGCTGACT +
Preference number: 4 (lower is better)
Translates to: EGPFRVAGRKRRHNFPERGAALW*DPGQLT
Trigger: AGTCAGCTGGCCAGGATCCCACCACAAAGCTGCCCC...CCTTTCCGGGAAATTGTGACGTCTCTTTCTCCCCGCTACTCTGAAAGGCCCTTC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp CCTCTGCCCACCCTTCAAATTTGGGACCTGACCAAAGTGTTTAACCCTCGCGTTGGTGGGGCAGCTTTGTaGTGGGATCCTGGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: PLPTLQIWDLTKVFNPRVGGAAL*WDPGQL
Trigger: CAGCTGGCCAGGATCCCACCACAAAGCTGCCCCACC...AACGCGAGGGTTAAACACTTTGGTCAGGTCCCAAATTTGAAGGGTGGGCAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp CTTCATGGGGTTGCTGTGAGGACTGAATGGGTTAGAAGAATGGCTGGCACATGGTGGCTGGCTGCACTGTaGGTCACAGCAGGATGGGGG +
Preference number: 4 (lower is better)
Translates to: LHGVAVRTEWVRRMAGTWWLAAL*VTAGWG
Trigger: CCCCCATCCTGCTGTGACCCACAGTGCAGCCAGCCA...CCATGTGCCAGCCATTCTTCTAACCCATTCAGTCCTCACAGCAACCCCATGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp CCTGAAAACAATTTGGGTGTGCACCCACACCTCTGCCCAGAGGCCTCAGTTGCTTTTGGAGCTGGGGAGTaGCAAGCCAGAGCTCACTCC +
Preference number: 4 (lower is better)
Translates to: PENNLGVHPHLCPEASVAFGAGE*QARAHS
Trigger: GGAGTGAGCTCTGGCTTGCCACTCCCCAGCTCCAAA...AGCAACTGAGGCCTCTGGGCAGAGGTGTGGGTGCACACCCAAATTGTTTTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp AATGACAACCGGCCCATCTTTCTGCAGAGCAGCTATGAGGCCAGCGTCCCTGAGGGGCTGGACAATGTCTaGCTCTCTGCAAGCTCCCAA +
Preference number: 4 (lower is better)
Translates to: NDNRPIFLQSSYEASVPEGLDNV*LSASSQ
Trigger: TTGGGAGCTTGCAGAGAGCCAGACATTGTCCAGCCC...CTCAGGGACGCTGGCCTCATAGCTGCTCTGCAGAAAGATGGGCCGGTTGTCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp AGCAGGCGCAACAGCTCCAAGGCTCAGAGGGAGAGAAGGGAGGACCCTGAAAACGGATTTGCGAGAGTGTaGTGGCTAGCTCCAGAAGGA +
Preference number: 4 (lower is better)
Translates to: SRRNSSKAQRERREDPENGFARV*WLAPEG
Trigger: TCCTTCTGGAGCTAGCCACCACACTCTCGCAAATCC...GTTTTCAGGGTCCTCCCTTCTCTCCCTCTGAGCCTTGGAGCTGTTGCGCCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp CCACAGATAGCATCCCTAGTGTGGGCAGGACTTGGGACCCCACAGCTGTCCTGGTCTCTTTACCAACTATaGGGTTTCCGACTCGGAGGC +
Preference number: 4 (lower is better)
Translates to: PQIASLVWAGLGTPQLSWSLYQL*GFRLGG
Trigger: GCCTCCGAGTCGGAAACCCCATAGTTGGTAAAGAGA...CCAGGACAGCTGTGGGGTCCCAAGTCCTGCCCACACTAGGGATGCTATCTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp TTCCTGCAGCCTGCAGCACCGGTCTCTGAAGCAGGAGGATCTACAGGTAGACCTCCGAGGCTCCCCTCTTaGGAAGTAAACAGGCACAAG +
Preference number: 4 (lower is better)
Translates to: FLQPAAPVSEAGGSTGRPPRLPS*EVNRHK
Trigger: CTTGTGCCTGTTTACTTCCCAAGAGGGGAGCCTCGG...AGGTCTACCTGTAGATCCTCCTGCTTCAGAGACCGGTGCTGCAGGCTGCAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp ATGACCACGAGTGCACATCTCTTGACCAGAAGTCTTTCATCAAGCAGCAGCGAGAACAGGGCACCTCTCTaGCCGGTGCCCGGGAGTGTG +
Preference number: 4 (lower is better)
Translates to: MTTSAHLLTRSLSSSSSENRAPL*PVPGSV
Trigger: CACACTCCCGGGCACCGGCCAGAGAGGTGCCCTGTT...CTCGCTGCTGCTTGATGAAAGACTTCTGGTCAAGAGATGTGCACTCGTGGTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp AATGACAACCGGCCCATCTTTCTGCAGAGCAGCTATGAGGCCAGCGTCCCTGAGGCATTCGGTGGCTTGTaGCAGCATAACTCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: NDNRPIFLQSSYEASVPEAFGGL*QHNSSL
Trigger: GAGGCTGGAGTTATGCTGCCACAAGCCACCGAATGC...CTCAGGGACGCTGGCCTCATAGCTGCTCTGCAGAAAGATGGGCCGGTTGTCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp ACGAGTGCACATCTCTTGACCAGAAGTCTTTCATCAAGCAGCAGCGAGGGGGTCCGCTGTGGACTGGAGTaGAGGACAGCTGCCCTTCCA +
Preference number: 4 (lower is better)
Translates to: TSAHLLTRSLSSSSSEGVRCGLE*RTAALP
Trigger: TGGAAGGGCAGCTGTCCTCCACTCCAGTCCACAGCG...GACCCCCTCGCTGCTGCTTGATGAAAGACTTCTGGTCAAGAGATGTGCACTCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp GGCCACGCTTCACTCTGTACACAGAAGCCTCATACTTCTGTGCACAGAACTGGGTCTGCCTGTCCGCTGTaGACTGGAGTGGAGGACAGC +
Preference number: 4 (lower is better)
Translates to: GHASLCTQKPHTSVHRTGSACPL*TGVEDS
Trigger: GCTGTCCTCCACTCCAGTCCACAGCGGACAGGCAGA...CCCAGTTCTGTGCACAGAAGTATGAGGCTTCTGTGTACAGAGTGAAGCGTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR CAA 72 bp AACCTTTGCCATTTGGCAACTTCTCCATGCTGGGCTTaGGCACCTGGAGGGCAAGGCTTCTGTGGCGAGCGA +
Preference number: 4 (lower is better)
Translates to: NLCHLATSPCWA*APGGQGFCGER
Trigger: TCGCTCGCCACAGAAGCCTTGCCCTCCAGGTGCCAAAGCCCAGCATGGAGAAGTTGCCAAATGGCAAAGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR TCA 90 bp GGCCACGCTTCACTCTGTACACAGAAGCCTCATACTTCTGTGCACAGAACTGGGGGCCAAAGGCCCAGATaGCCACGAGTGCACATCTCT +
Preference number: 4 (lower is better)
Translates to: GHASLCTQKPHTSVHRTGGQRPR*PRVHIS
Trigger: AGAGATGTGCACTCGTGGTCATCTGGGCCTTTGGCC...CCCAGTTCTGTGCACAGAAGTATGAGGCTTCTGTGTACAGAGTGAAGCGTGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR TCA 90 bp GCAGGCGCAACAGCTCCAAGGCTCAGAGGGAGAGAAGGGAGGACCCTGAAAACATCTTCAATCCCTTCCTaGTTGATCCCAACGTGGGTG +
Preference number: 4 (lower is better)
Translates to: AGATAPRLRGREGRTLKTSSIPS*LIPTWV
Trigger: CACCCACGTTGGGATCAATCAGGAAGGGATTGAAGA...TGTTTTCAGGGTCCTCCCTTCTCTCCCTCTGAGCCTTGGAGCTGTTGCGCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR TCA 90 bp GAAGGGCCTTTCAGAGTAGCGGGGAGAAAGAGACGTCACAATTTCCCGGAAAGGGGGGTGGGACTGCTTTaGCGGGTCATCAGCAAAGCA +
Preference number: 4 (lower is better)
Translates to: EGPFRVAGRKRRHNFPERGVGLL*RVISKA
Trigger: TGCTTTGCTGATGACCCGTCAAAGCAGTCCCACCCC...CCTTTCCGGGAAATTGTGACGTCTCTTTCTCCCCGCTACTCTGAAAGGCCCTTC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR TCA 90 bp AATGACAACCGGCCCATCTTTCTGCAGAGCAGCTATGAGGCCAGCGTCCCTGAGTGCAGCGTCTCAGGATaGCTTCTCCAAGGTCCTCTT +
Preference number: 4 (lower is better)
Translates to: NDNRPIFLQSSYEASVPECSVSG*LLQGPL
Trigger: AAGAGGACCTTGGAGAAGTCATCCTGAGACGCTGCA...CTCAGGGACGCTGGCCTCATAGCTGCTCTGCAGAAAGATGGGCCGGTTGTCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR TCA 90 bp GACACACCCAGGCTGGGCCACGCTTCACTCTGTACACAGAAGCCTCATACTTCTGAGGGAGGCCCGGAGTaGATGAGTCTCTTTACCAAC +
Preference number: 4 (lower is better)
Translates to: DTPRLGHASLCTQKPHTSEGGPE*MSLFTN
Trigger: GTTGGTAAAGAGACTCATTCACTCCGGGCCTCCCTC...AGAAGTATGAGGCTTCTGTGTACAGAGTGAAGCGTGGCCCAGCCTGGGTGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR TCA 90 bp ACGAGTGCACATCTCTTGACCAGAAGTCTTTCATCAAGCAGCAGCGAGGGGGTCTTCCCGGAAAGGAGTTaGGAAGAGAGCCAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: TSAHLLTRSLSSSSSEGVFPERS*EESQGP
Trigger: TGGGCCCTGGCTCTCTTCTCAACTCCTTTCCGGGAA...GACCCCCTCGCTGCTGCTTGATGAAAGACTTCTGGTCAAGAGATGTGCACTCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp ATGACCACGAGTGCACATCTCTTGACCAGAAGTCTTTCATCAAGCAGCAGCGAGTGTAGTCACAGTGGCTaGGGTTGTCCTCGGGGCCCG +
Preference number: 4 (lower is better)
Translates to: MTTSAHLLTRSLSSSSSECSHSG*GCPRGP
Trigger: CGGGCCCCGAGGACAACCGCAGCCACTGTGACTACA...CTCGCTGCTGCTTGATGAAAGACTTCTGGTCAAGAGATGTGCACTCGTGGTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp AGCAGGCGCAACAGCTCCAAGGCTCAGAGGGAGAGAAGGGAGGACCCTGAAAACCCAGATGACCACGAGTaGACATCTCTTGACCAGAAG +
Preference number: 4 (lower is better)
Translates to: SRRNSSKAQRERREDPENPDDHE*TSLDQK
Trigger: CTTCTGGTCAAGAGATGTGCACTCGTGGTCATCTGG...GTTTTCAGGGTCCTCCCTTCTCTCCCTCTGAGCCTTGGAGCTGTTGCGCCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp TCTCTTGACCAGAAGTCTTTCATCAAGCAGCAGCGAGGGGGTCTGCAGAGAGGATTGGAGAGCCCTGTTTaGTCCTCCTCCCAGCTGGCA +
Preference number: 4 (lower is better)
Translates to: SLDQKSFIKQQRGGLQRGLESPV*SSSQLA
Trigger: TGCCAGCTGGGAGGAGGAGCAAACAGGGCTCTCCAA...TCCTCTCTGCAGACCCCCTCGCTGCTGCTTGATGAAAGACTTCTGGTCAAGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp GGCCACGCTTCACTCTGTACACAGAAGCCTCATACTTCTGTGCACAGAACTGGGGGCCACCAAGACGGCTaGCAAGACCATGCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: GHASLCTQKPHTSVHRTGGHQDG*QDHAWR
Trigger: TCTCCAAGCATGGTCTTGGCAGCCGTCTTGGTGGCC...CCCAGTTCTGTGCACAGAAGTATGAGGCTTCTGTGTACAGAGTGAAGCGTGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp TGCTATACCCGCCAGTCCCTGACAGCAGTTGGCTTTTTGCTCTTAGTACCTGTAGGAGACGTGGCTGGCTaGACTGTGGGTCACAGCAGG +
Preference number: 4 (lower is better)
Translates to: CYTRQSLTAVGFLLLVPVGDVAG*TVGHSR
Trigger: CCTGCTGTGACCCACAGTGCAGCCAGCCACGTCTCC...TACAGGTACTAAGAGCAAAAAGCCAACTGCTGTCAGGGACTGGCGGGTATAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp GAAGGGCCTTTCAGAGTAGCGGGGAGAAAGAGACGTCACAATTTCCCGGAAAGGGAGGGCACTGCACACTaGGCTGAGGAGCTTTGGCTA +
Preference number: 4 (lower is better)
Translates to: EGPFRVAGRKRRHNFPEREGTAH*AEELWL
Trigger: TAGCCAAAGCTCCTCAGCGCAGTGTGCAGTGCCCTC...CCTTTCCGGGAAATTGTGACGTCTCTTTCTCCCCGCTACTCTGAAAGGCCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp GGCCACGCTTCACTCTGTACACAGAAGCCTCATACTTCTGTGCACAGAACTGGGTTCCACCAAGACTCCTaGCTCAGAGGGTGGGGACAC +
Preference number: 4 (lower is better)
Translates to: GHASLCTQKPHTSVHRTGFHQDS*LRGWGH
Trigger: GTGTCCCCACCCTCTGAGGCAGGAGTCTTGGTGGAA...CCCAGTTCTGTGCACAGAAGTATGAGGCTTCTGTGTACAGAGTGAAGCGTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp TCTCTTGACCAGAAGTCTTTCATCAAGCAGCAGCGAGGGGGTCTGCAGAGAGGATTCCACCAAGACTCCTaGCTCAGAGGGTGGGGACAC +
Preference number: 4 (lower is better)
Translates to: SLDQKSFIKQQRGGLQRGFHQDS*LRGWGH
Trigger: GTGTCCCCACCCTCTGAGGCAGGAGTCTTGGTGGAA...TCCTCTCTGCAGACCCCCTCGCTGCTGCTTGATGAAAGACTTCTGGTCAAGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp GACAGAAGCGTGGGAGGCTGGCAATGCTCCCCTCCCTGCATCGGGACCAGGAGGTTCTCCAATAGAGCCTaGTTGGAGAGAAATCTTTCT +
Preference number: 4 (lower is better)
Translates to: DRSVGGWQCSPPCIGTRRFSNRA*LERNLS
Trigger: AGAAAGATTTCTCTCCAAGCAGGCTCTATTGGAGAA...CCTCCTGGTCCCGATGCAGGGAGGGGAGCATTGCCAGCCTCCCACGCTTCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp TCTCTTGACCAGAAGTCTTTCATCAAGCAGCAGCGAGGGGGTCTGCAGAGAGGAATCCAGCCTAGGATTTaGAGGGAGGCCCCAGGGGAA +
Preference number: 4 (lower is better)
Translates to: SLDQKSFIKQQRGGLQRGIQPRI*REAPGE
Trigger: TTCCCCTGGGGCCTCCCTGCAAATCCTAGGCTGGAT...TCCTCTCTGCAGACCCCCTCGCTGCTGCTTGATGAAAGACTTCTGGTCAAGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp AGCAGCGAGGGGGTCTGCAGAGAGGAAGGTGCTCTTCTGAGGATCATCTTTGGGAAAGCCCTGAGGATTTaGGAGAGTGTGGTGGCTAGC +
Preference number: 4 (lower is better)
Translates to: SSEGVCREEGALLRIIFGKALRI*ESVVAS
Trigger: GCTAGCCACCACACTCTCGCAAATCCTCAGGGCTTT...CCCAAAGATGATCCTCAGAAGAGCACCTTCCTCTCTGCAGACCCCCTCGCTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp CTTCATGGGGTTGCTGTGAGGACTGAATGGGTTAGAAGAATGGCTGGCACATGGGTGCACCCACACCTCTaGCCAGAGGCCTCAGTTGCT +
Preference number: 4 (lower is better)
Translates to: LHGVAVRTEWVRRMAGTWVHPHL*PEASVA
Trigger: AGCAACTGAGGCCTCTGGGCAGAGGTGTGGGTGCAC...CCATGTGCCAGCCATTCTTCTAACCCATTCAGTCCTCACAGCAACCCCATGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp GAAGGGCCTTTCAGAGTAGCGGGGAGAAAGAGACGTCACAATTTCCCGGAAAGGAAGAAAGGGCTCCTTTaGCCAGGGAGCAGGCGCAAC +
Preference number: 4 (lower is better)
Translates to: EGPFRVAGRKRRHNFPERKKGLL*PGSRRN
Trigger: GTTGCGCCTGCTCCCTGGGCAAAGGAGCCCTTTCTT...CCTTTCCGGGAAATTGTGACGTCTCTTTCTCCCCGCTACTCTGAAAGGCCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp CCTGAAAACAATTTGGGTGTGCACCCACACCTCTGCCCAGAGGCCTCAGTTGCTACCGGCCCATCTTTCTaGAGAGCAGCTATGAGGCCA +
Preference number: 4 (lower is better)
Translates to: PENNLGVHPHLCPEASVATGPSF*RAAMRP
Trigger: TGGCCTCATAGCTGCTCTGCAGAAAGATGGGCCGGT...AGCAACTGAGGCCTCTGGGCAGAGGTGTGGGTGCACACCCAAATTGTTTTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp TGCTATACCCGCCAGTCCCTGACAGCAGTTGGCTTTTTGCTCTTAGTACCTGTACACCTCTCTGGCCGGTaGCCGGGAGTGTGCAAAGTC +
Preference number: 4 (lower is better)
Translates to: CYTRQSLTAVGFLLLVPVHLSGR*PGVCKV
Trigger: GACTTTGCACACTCCCGGGCACCGGCCAGAGAGGTG...TACAGGTACTAAGAGCAAAAAGCCAACTGCTGTCAGGGACTGGCGGGTATAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp GCAGGCGCAACAGCTCCAAGGCTCAGAGGGAGAGAAGGGAGGACCCTGAAAACAGTGGGGGCATGTTTGTaGACACCCCATTACATCTTG +
Preference number: 4 (lower is better)
Translates to: AGATAPRLRGREGRTLKTVGACL*TPHYIL
Trigger: CAAGATGTAATGGGGTGTCCACAAACATGCCCCCAC...TGTTTTCAGGGTCCTCCCTTCTCTCCCTCTGAGCCTTGGAGCTGTTGCGCCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp CCTCTGCCCACCCTTCAAATTTGGGACCTGACCAAAGTGTTTAACCCTCGCGTTAGGGCAAGGCTTCTGTaGCGAGCGAGGGTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: PLPTLQIWDLTKVFNPRVRARLL*RARVLL
Trigger: AAGCAGCACCCTCGCTCGCCACAGAAGCCTTGCCCT...AACGCGAGGGTTAAACACTTTGGTCAGGTCCCAAATTTGAAGGGTGGGCAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp ATGACCACGAGTGCACATCTCTTGACCAGAAGTCTTTCATCAAGCAGCAGCGAGGCCAGGACAGTGTCTTaGCCCCGGTGTAGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: MTTSAHLLTRSLSSSSSEARTVS*PRCRLS
Trigger: GCTCAGCCTACACCGGGGCCAAGACACTGTCCTGGC...CTCGCTGCTGCTTGATGAAAGACTTCTGGTCAAGAGATGTGCACTCGTGGTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp TGCTATACCCGCCAGTCCCTGACAGCAGTTGGCTTTTTGCTCTTAGTACCTGTAGGCTGCCGCTTTCCCTaGGTGAGGTGTGGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: CYTRQSLTAVGFLLLVPVGCRFP*VRCGAA
Trigger: AGCAGCTCCACACCTCACCCAGGGAAAGCGGCAGCC...TACAGGTACTAAGAGCAAAAAGCCAACTGCTGTCAGGGACTGGCGGGTATAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp CTTCATGGGGTTGCTGTGAGGACTGAATGGGTTAGAAGAATGGCTGGCACATGGACCCCACAGCTGTCCTaGAGAGGTCCAGACCATCCC +
Preference number: 4 (lower is better)
Translates to: LHGVAVRTEWVRRMAGTWTPQLS*RGPDHP
Trigger: GGGATGGTCTGGACCTCTCCAGGACAGCTGTGGGGT...CCATGTGCCAGCCATTCTTCTAACCCATTCAGTCCTCACAGCAACCCCATGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp ACGAGTGCACATCTCTTGACCAGAAGTCTTTCATCAAGCAGCAGCGAGGGGGTCCTGAGAAGCCCATCCTaGGGTGGGACTGCTTTGACG +
Preference number: 4 (lower is better)
Translates to: TSAHLLTRSLSSSSSEGVLRSPS*GGTALT
Trigger: CGTCAAAGCAGTCCCACCCCAGGATGGGCTTCTCAG...GACCCCCTCGCTGCTGCTTGATGAAAGACTTCTGGTCAAGAGATGTGCACTCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp TCTCTTGACCAGAAGTCTTTCATCAAGCAGCAGCGAGGGGGTCTGCAGAGAGGATTTGTGGTGGGATCCTaGCCAGCTGACTGGGACAGG +
Preference number: 4 (lower is better)
Translates to: SLDQKSFIKQQRGGLQRGFVVGS*PADWDR
Trigger: CCTGTCCCAGTCAGCTGGCCAGGATCCCACCACAAA...TCCTCTCTGCAGACCCCCTCGCTGCTGCTTGATGAAAGACTTCTGGTCAAGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp CCTCTGCCCACCCTTCAAATTTGGGACCTGACCAAAGTGTTTAACCCTCGCGTTGGGACACACCCAGGCTaGGCCACGCTTCACTCTGTA +
Preference number: 4 (lower is better)
Translates to: PLPTLQIWDLTKVFNPRVGTHPG*ATLHSV
Trigger: TACAGAGTGAAGCGTGGCCCAGCCTGGGTGTGTCCC...AACGCGAGGGTTAAACACTTTGGTCAGGTCCCAAATTTGAAGGGTGGGCAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp TTCCTGCAGCCTGCAGCACCGGTCTCTGAAGCAGGAGGATCTACAGGTAGACCTGGAAGGAAGGGACAGTaGGCTTCTCCAATAGAGCCT +
Preference number: 4 (lower is better)
Translates to: FLQPAAPVSEAGGSTGRPGRKGQ*ASPIEP
Trigger: AGGCTCTATTGGAGAAGCCCACTGTCCCTTCCTTCC...AGGTCTACCTGTAGATCCTCCTGCTTCAGAGACCGGTGCTGCAGGCTGCAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp AGCAGCGAGGGGGTCTGCAGAGAGGAAGGTGCTCTTCTGAGGATCATCTTTGGGGGATTTGCGAGAGTGTaGTGGCTAGCTCCAGAAGGA +
Preference number: 4 (lower is better)
Translates to: SSEGVCREEGALLRIIFGGFARV*WLAPEG
Trigger: TCCTTCTGGAGCTAGCCACCACACTCTCGCAAATCC...CCCAAAGATGATCCTCAGAAGAGCACCTTCCTCTCTGCAGACCCCCTCGCTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp CCTCTGCCCACCCTTCAAATTTGGGACCTGACCAAAGTGTTTAACCCTCGCGTTCTTTCACAGAGCCCTTaGCCGAGGCTCCCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: PLPTLQIWDLTKVFNPRVLSQSP*PRLPSW
Trigger: CCAAGAGGGGAGCCTCGGCCAAGGGCTCTGTGAAAG...AACGCGAGGGTTAAACACTTTGGTCAGGTCCCAAATTTGAAGGGTGGGCAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp TGCTATACCCGCCAGTCCCTGACAGCAGTTGGCTTTTTGCTCTTAGTACCTGTACTCTGGAAGGTGCTGTaGGGAAAGGGGGACCCAGGC +
Preference number: 4 (lower is better)
Translates to: CYTRQSLTAVGFLLLVPVLWKVL*GKGDPG
Trigger: GCCTGGGTCCCCCTTTCCCCACAGCACCTTCCAGAG...TACAGGTACTAAGAGCAAAAAGCCAACTGCTGTCAGGGACTGGCGGGTATAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp CTTCATGGGGTTGCTGTGAGGACTGAATGGGTTAGAAGAATGGCTGGCACATGGAGGGCACATGCTCAGTaGCACCAGAGGCGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: LHGVAVRTEWVRRMAGTWRAHAQ*HQRRKQ
Trigger: CTGCTTCCGCCTCTGGTGCCACTGAGCATGTGCCCT...CCATGTGCCAGCCATTCTTCTAACCCATTCAGTCCTCACAGCAACCCCATGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp TTCCTGCAGCCTGCAGCACCGGTCTCTGAAGCAGGAGGATCTACAGGTAGACCTAAGATCTGGTGTCTCTaGGCCCACATTCTGCCTGTC +
Preference number: 4 (lower is better)
Translates to: FLQPAAPVSEAGGSTGRPKIWCL*AHILPV
Trigger: GACAGGCAGAATGTGGGCCCAGAGACACCAGATCTT...AGGTCTACCTGTAGATCCTCCTGCTTCAGAGACCGGTGCTGCAGGCTGCAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR CAA 72 bp GGGATTCTGAGAAGCCCATCCTGGGGTGGGACTGCTTaGACGGGTCATCAGCAAAGCACTCACCAAAACCAC +
Preference number: 4 (lower is better)
Translates to: GILRSPSWGGTA*TGHQQSTHQNH
Trigger: GTGGTTTTGGTGAGTGCTTTGCTGATGACCCGTCAAAGCAGTCCCACCCCAGGATGGGCTTCTCAGAATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR TCA 90 bp GTTAGTGTTATTCCTAAGCTAAAAAGGAAGTCACCCCTTGCAAAGGCTAGGGCAGGGATCCTGGCCAGCTaGCTGGGACAGGAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: VSVIPKLKRKSPLAKARAGILAS*LGQELG
Trigger: GCCCAGCTCCTGTCCCAGTCAGCTGGCCAGGATCCC...TGCCCTAGCCTTTGCAAGGGGTGACTTCCTTTTTAGCTTAGGAATAACACTAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR TCA 90 bp GAAGGGCCTTTCAGAGTAGCGGGGAGAAAGAGACGTCACAATTTCCCGGAAAGGACTGGGGAGTCAAAGTaGGGGGCTGGACAATGTCTG +
Preference number: 4 (lower is better)
Translates to: EGPFRVAGRKRRHNFPERTGESK*GAGQCL
Trigger: CAGACATTGTCCAGCCCCTCACTTTGACTCCCCAGT...CCTTTCCGGGAAATTGTGACGTCTCTTTCTCCCCGCTACTCTGAAAGGCCCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR TCA 90 bp TTCCTGCAGCCTGCAGCACCGGTCTCTGAAGCAGGAGGATCTACAGGTAGACCTTCATCTGAGGGAAGATaGGGCTCTGTGTTATGCCAG +
Preference number: 4 (lower is better)
Translates to: FLQPAAPVSEAGGSTGRPSSEGR*GSVLCQ
Trigger: CTGGCATAACACAGAGCCTCATCTTCCCTCAGATGA...AGGTCTACCTGTAGATCCTCCTGCTTCAGAGACCGGTGCTGCAGGCTGCAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR TCA 90 bp CCACAGATAGCATCCCTAGTGTGGGCAGGACTTGGGACCCCACAGCTGTCCTGGCAATACTACTCTTACTaGAATCCTAGAGCCAGCGAG +
Preference number: 4 (lower is better)
Translates to: PQIASLVWAGLGTPQLSWQYYSY*NPRASE
Trigger: CTCGCTGGCTCTAGGATTTCAGTAAGAGTAGTATTG...CCAGGACAGCTGTGGGGTCCCAAGTCCTGCCCACACTAGGGATGCTATCTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR TCA 90 bp TGCTATACCCGCCAGTCCCTGACAGCAGTTGGCTTTTTGCTCTTAGTACCTGTACCCTGGCCTGGTGCCTaGAACCCAATTGAGAGCCCT +
Preference number: 4 (lower is better)
Translates to: CYTRQSLTAVGFLLLVPVPWPGA*NPIESP
Trigger: AGGGCTCTCAATTGGGTTTCAGGCACCAGGCCAGGG...TACAGGTACTAAGAGCAAAAAGCCAACTGCTGTCAGGGACTGGCGGGTATAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR TCA 90 bp TGCTATACCCGCCAGTCCCTGACAGCAGTTGGCTTTTTGCTCTTAGTACCTGTACAGGGCCTCAGCTTGTaGGGACTTGGAGCATACCCC +
Preference number: 4 (lower is better)
Translates to: CYTRQSLTAVGFLLLVPVQGLSL*GLGAYP
Trigger: GGGGTATGCTCCAAGTCCTCACAAGCTGAGGCCCTG...TACAGGTACTAAGAGCAAAAAGCCAACTGCTGTCAGGGACTGGCGGGTATAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR TCA 90 bp CCTCTGCCCACCCTTCAAATTTGGGACCTGACCAAAGTGTTTAACCCTCGCGTTGAGCCCAGAAAGCCCTaGGGATTTGCGAGAGTGTGG +
Preference number: 4 (lower is better)
Translates to: PLPTLQIWDLTKVFNPRVEPRKP*GFARVW
Trigger: CCACACTCTCGCAAATCCTCAGGGCTTTCTGGGCTC...AACGCGAGGGTTAAACACTTTGGTCAGGTCCCAAATTTGAAGGGTGGGCAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR TCA 90 bp CTTCATGGGGTTGCTGTGAGGACTGAATGGGTTAGAAGAATGGCTGGCACATGGTGGGGAGCAGGGAGCTaGCTCCCAGAAACACAGAGA +
Preference number: 4 (lower is better)
Translates to: LHGVAVRTEWVRRMAGTWWGAGS*LPETQR
Trigger: TCTCTGTGTTTCTGGGAGTCAGCTCCCTGCTCCCCA...CCATGTGCCAGCCATTCTTCTAACCCATTCAGTCCTCACAGCAACCCCATGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR TCA 90 bp AGCAGCGAGGGGGTCTGCAGAGAGGAAGGTGCTCTTCTGAGGATCATCTTTGGGGAGAAGGGAGGACCCTaGAAACAATTTGGGTGTGCA +
Preference number: 4 (lower is better)
Translates to: SSEGVCREEGALLRIIFGEKGGP*KQFGCA
Trigger: TGCACACCCAAATTGTTTTCAGGGTCCTCCCTTCTC...CCCAAAGATGATCCTCAGAAGAGCACCTTCCTCTCTGCAGACCCCCTCGCTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR TCA 90 bp CCACAGATAGCATCCCTAGTGTGGGCAGGACTTGGGACCCCACAGCTGTCCTGGATCATTCAATCCACTTaGGTGCCTCAGTTACCTCCT +
Preference number: 4 (lower is better)
Translates to: PQIASLVWAGLGTPQLSWIIQST*VPQLPP
Trigger: AGGAGGTAACTGAGGCACTCAAGTGGATTGAATGAT...CCAGGACAGCTGTGGGGTCCCAAGTCCTGCCCACACTAGGGATGCTATCTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp AGCAGCGAGGGGGTCTGCAGAGAGGAAGGTGCTCTTCTGAGGATCATCTTTGGGCCAGATGACCACGAGTaGACATCTCTTGACCAGAAG +
Preference number: 4 (lower is better)
Translates to: SSEGVCREEGALLRIIFGPDDHE*TSLDQK
Trigger: CTTCTGGTCAAGAGATGTGCACTCGTGGTCATCTGG...CCCAAAGATGATCCTCAGAAGAGCACCTTCCTCTCTGCAGACCCCCTCGCTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp GAAGGGCCTTTCAGAGTAGCGGGGAGAAAGAGACGTCACAATTTCCCGGAAAGGTCCAGCTGCTGGAAATaGCCTGCCTCTTGCCACTCT +
Preference number: 4 (lower is better)
Translates to: EGPFRVAGRKRRHNFPERSSCWK*PASCHS
Trigger: AGAGTGGCAAGAGGCAGGGCATTTCCAGCAGCTGGA...CCTTTCCGGGAAATTGTGACGTCTCTTTCTCCCCGCTACTCTGAAAGGCCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp CCTCTGCCCACCCTTCAAATTTGGGACCTGACCAAAGTGTTTAACCCTCGCGTTCCCAGGTCCTCCCTCTaGCCACCCTTCAAATTTGGG +
Preference number: 4 (lower is better)
Translates to: PLPTLQIWDLTKVFNPRVPRSSL*PPFKFG
Trigger: CCCAAATTTGAAGGGTGGGCAGAGGGAGGACCTGGG...AACGCGAGGGTTAAACACTTTGGTCAGGTCCCAAATTTGAAGGGTGGGCAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp TGCTATACCCGCCAGTCCCTGACAGCAGTTGGCTTTTTGCTCTTAGTACCTGTAGTGCACCCACACCTCTaGCCAGAGGCCTCAGTTGCT +
Preference number: 4 (lower is better)
Translates to: CYTRQSLTAVGFLLLVPVVHPHL*PEASVA
Trigger: AGCAACTGAGGCCTCTGGGCAGAGGTGTGGGTGCAC...TACAGGTACTAAGAGCAAAAAGCCAACTGCTGTCAGGGACTGGCGGGTATAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp ACGAGTGCACATCTCTTGACCAGAAGTCTTTCATCAAGCAGCAGCGAGGGGGTCCATAACTCCAGCCTCTaGCTCCATCTGCATGTGGCC +
Preference number: 4 (lower is better)
Translates to: TSAHLLTRSLSSSSSEGVHNSSL*LHLHVA
Trigger: GGCCACATGCAGATGGAGGCAGAGGCTGGAGTTATG...GACCCCCTCGCTGCTGCTTGATGAAAGACTTCTGGTCAAGAGATGTGCACTCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp GTTAGTGTTATTCCTAAGCTAAAAAGGAAGTCACCCCTTGCAAAGGCTAGGGCAGGGAGCTGGCGAGGCTaGGGCCCTCTGTGCTCATGG +
Preference number: 4 (lower is better)
Translates to: VSVIPKLKRKSPLAKARAGSWRG*GPLCSW
Trigger: CCATGAGCACAGAGGGCCCCAGCCTCGCCAGCTCCC...TGCCCTAGCCTTTGCAAGGGGTGACTTCCTTTTTAGCTTAGGAATAACACTAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp AATGACAACCGGCCCATCTTTCTGCAGAGCAGCTATGAGGCCAGCGTCCCTGAGGTGGGGGCATGTTTGTaGACACCCCATTACATCTTG +
Preference number: 4 (lower is better)
Translates to: NDNRPIFLQSSYEASVPEVGACL*TPHYIL
Trigger: CAAGATGTAATGGGGTGTCCACAAACATGCCCCCAC...CTCAGGGACGCTGGCCTCATAGCTGCTCTGCAGAAAGATGGGCCGGTTGTCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp GGCCACGCTTCACTCTGTACACAGAAGCCTCATACTTCTGTGCACAGAACTGGGAGACCTAGGGGGATGTaGGGGCATGTTTGTGGACAC +
Preference number: 4 (lower is better)
Translates to: GHASLCTQKPHTSVHRTGRPRGM*GHVCGH
Trigger: GTGTCCACAAACATGCCCCCACATCCCCCTAGGTCT...CCCAGTTCTGTGCACAGAAGTATGAGGCTTCTGTGTACAGAGTGAAGCGTGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp GGCCACGCTTCACTCTGTACACAGAAGCCTCATACTTCTGTGCACAGAACTGGGATAGCATCCCTAGTGTaGGCAGGACTTGGGACCCCA +
Preference number: 4 (lower is better)
Translates to: GHASLCTQKPHTSVHRTGIASLV*AGLGTP
Trigger: TGGGGTCCCAAGTCCTGCCCACACTAGGGATGCTAT...CCCAGTTCTGTGCACAGAAGTATGAGGCTTCTGTGTACAGAGTGAAGCGTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp GAAGGGCCTTTCAGAGTAGCGGGGAGAAAGAGACGTCACAATTTCCCGGAAAGGGGGCTGGACAATGTCTaGCTCTCTGCAAGCTCCCAA +
Preference number: 4 (lower is better)
Translates to: EGPFRVAGRKRRHNFPERGLDNV*LSASSQ
Trigger: TTGGGAGCTTGCAGAGAGCCAGACATTGTCCAGCCC...CCTTTCCGGGAAATTGTGACGTCTCTTTCTCCCCGCTACTCTGAAAGGCCCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp CCTGAAAACAATTTGGGTGTGCACCCACACCTCTGCCCAGAGGCCTCAGTTGCTTTCTGTGCACAGAACTaGGGAGTCAAAGTGAGGGGC +
Preference number: 4 (lower is better)
Translates to: PENNLGVHPHLCPEASVAFCAQN*GVKVRG
Trigger: GCCCCTCACTTTGACTCCCCAGTTCTGTGCACAGAA...AGCAACTGAGGCCTCTGGGCAGAGGTGTGGGTGCACACCCAAATTGTTTTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp TTCCTGCAGCCTGCAGCACCGGTCTCTGAAGCAGGAGGATCTACAGGTAGACCTGAGATCAGATTGACTTaGAAGGAAGGGACAGTGGGC +
Preference number: 4 (lower is better)
Translates to: FLQPAAPVSEAGGSTGRPEIRLT*KEGTVG
Trigger: GCCCACTGTCCCTTCCTTCCAAGTCAATCTGATCTC...AGGTCTACCTGTAGATCCTCCTGCTTCAGAGACCGGTGCTGCAGGCTGCAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp ATGACCACGAGTGCACATCTCTTGACCAGAAGTCTTTCATCAAGCAGCAGCGAGGTGGGTCCGCTGCTCTaGAAGGTGCTGTGGGGAAAG +
Preference number: 4 (lower is better)
Translates to: MTTSAHLLTRSLSSSSSEVGPLL*KVLWGK
Trigger: CTTTCCCCACAGCACCTTCCAGAGCAGCGGACCCAC...CTCGCTGCTGCTTGATGAAAGACTTCTGGTCAAGAGATGTGCACTCGTGGTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp TGCTATACCCGCCAGTCCCTGACAGCAGTTGGCTTTTTGCTCTTAGTACCTGTAGTGGGTCCGCTGCTCTaGAAGGTGCTGTGGGGAAAG +
Preference number: 4 (lower is better)
Translates to: CYTRQSLTAVGFLLLVPVVGPLL*KVLWGK
Trigger: CTTTCCCCACAGCACCTTCCAGAGCAGCGGACCCAC...TACAGGTACTAAGAGCAAAAAGCCAACTGCTGTCAGGGACTGGCGGGTATAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp CCTGAAAACAATTTGGGTGTGCACCCACACCTCTGCCCAGAGGCCTCAGTTGCTAAGATCTGGTGTCTCTaGGCCCACATTCTGCCTGTC +
Preference number: 4 (lower is better)
Translates to: PENNLGVHPHLCPEASVAKIWCL*AHILPV
Trigger: GACAGGCAGAATGTGGGCCCAGAGACACCAGATCTT...AGCAACTGAGGCCTCTGGGCAGAGGTGTGGGTGCACACCCAAATTGTTTTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR TCA 90 bp TTCCTGCAGCCTGCAGCACCGGTCTCTGAAGCAGGAGGATCTACAGGTAGACCTAGGAAGGTGCTCTTCTaGGGATCATCTTTGGGAAAG +
Preference number: 4 (lower is better)
Translates to: FLQPAAPVSEAGGSTGRPRKVLF*GSSLGK
Trigger: CTTTCCCAAAGATGATCCTCAGAAGAGCACCTTCCT...AGGTCTACCTGTAGATCCTCCTGCTTCAGAGACCGGTGCTGCAGGCTGCAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR TCA 90 bp TTCCTGCAGCCTGCAGCACCGGTCTCTGAAGCAGGAGGATCTACAGGTAGACCTCTTTCTAGAGTCATCTaGGGGAAGATGAGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: FLQPAAPVSEAGGSTGRPLSRVI*GKMRLC
Trigger: ACAGAGCCTCATCTTCCCTCAGATGACTCTAGAAAG...AGGTCTACCTGTAGATCCTCCTGCTTCAGAGACCGGTGCTGCAGGCTGCAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR TCA 90 bp CCACAGATAGCATCCCTAGTGTGGGCAGGACTTGGGACCCCACAGCTGTCCTGGTTGGTAAGTTTCTTGTaGAGCCGGACTCACTTTTTG +
Preference number: 4 (lower is better)
Translates to: PQIASLVWAGLGTPQLSWLVSFL*SRTHFL
Trigger: CAAAAAGTGAGTCCGGCTTCACAAGAAACTTACCAA...CCAGGACAGCTGTGGGGTCCCAAGTCCTGCCCACACTAGGGATGCTATCTGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp CCTCTGCCCACCCTTCAAATTTGGGACCTGACCAAAGTGTTTAACCCTCGCGTTGTGTGTGTCCCAGACTaGTTGGGCCACTGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: PLPTLQIWDLTKVFNPRVVCVPD*LGHCLP
Trigger: AGGAAGACAGTGGCCCAAGCAGTCTGGGACACACAC...AACGCGAGGGTTAAACACTTTGGTCAGGTCCCAAATTTGAAGGGTGGGCAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp TCTCTTGACCAGAAGTCTTTCATCAAGCAGCAGCGAGGGGGTCTGCAGAGAGGATTGGCAACTTCTCCATaGTGGGCTTTGGCACCTGGA +
Preference number: 4 (lower is better)
Translates to: SLDQKSFIKQQRGGLQRGLATSP*WALAPG
Trigger: TCCAGGTGCCAAAGCCCAGCATGGAGAAGTTGCCAA...TCCTCTCTGCAGACCCCCTCGCTGCTGCTTGATGAAAGACTTCTGGTCAAGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp ATGACCACGAGTGCACATCTCTTGACCAGAAGTCTTTCATCAAGCAGCAGCGAGCGGCTGCCAAGACCATaGTTGGAGAGCCCTGTTTGC +
Preference number: 4 (lower is better)
Translates to: MTTSAHLLTRSLSSSSSERLPRP*LESPVC
Trigger: GCAAACAGGGCTCTCCAAGCATGGTCTTGGCAGCCG...CTCGCTGCTGCTTGATGAAAGACTTCTGGTCAAGAGATGTGCACTCGTGGTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp CCTCTGCCCACCCTTCAAATTTGGGACCTGACCAAAGTGTTTAACCCTCGCGTTCTGCTGGAAATGCCCTaGCTCTTGCCACTCTGTCAC +
Preference number: 4 (lower is better)
Translates to: PLPTLQIWDLTKVFNPRVLLEMP*LLPLCH
Trigger: GTGACAGAGTGGCAAGAGGCAGGGCATTTCCAGCAG...AACGCGAGGGTTAAACACTTTGGTCAGGTCCCAAATTTGAAGGGTGGGCAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp CTTCATGGGGTTGCTGTGAGGACTGAATGGGTTAGAAGAATGGCTGGCACATGGCTGCTGGAAATGCCCTaGCTCTTGCCACTCTGTCAC +
Preference number: 4 (lower is better)
Translates to: LHGVAVRTEWVRRMAGTWLLEMP*LLPLCH
Trigger: GTGACAGAGTGGCAAGAGGCAGGGCATTTCCAGCAG...CCATGTGCCAGCCATTCTTCTAACCCATTCAGTCCTCACAGCAACCCCATGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp ATGACCACGAGTGCACATCTCTTGACCAGAAGTCTTTCATCAAGCAGCAGCGAGGGCCCAGAACAGAGCTaGTTTCACAGAGCCCTTGGC +
Preference number: 4 (lower is better)
Translates to: MTTSAHLLTRSLSSSSSEGPEQS*FHRALG
Trigger: GCCAAGGGCTCTGTGAAAGCAGCTCTGTTCTGGGCC...CTCGCTGCTGCTTGATGAAAGACTTCTGGTCAAGAGATGTGCACTCGTGGTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp TGCTATACCCGCCAGTCCCTGACAGCAGTTGGCTTTTTGCTCTTAGTACCTGTAGCAACTTCTCCATGCTaGGCTTTGGCACCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: CYTRQSLTAVGFLLLVPVATSPC*ALAPGG
Trigger: CCCTCCAGGTGCCAAAGCCCAGCATGGAGAAGTTGC...TACAGGTACTAAGAGCAAAAAGCCAACTGCTGTCAGGGACTGGCGGGTATAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp GCAGGCGCAACAGCTCCAAGGCTCAGAGGGAGAGAAGGGAGGACCCTGAAAACACCCACCCTTCAAATTTaGGACCTGACCAAAGTGTTT +
Preference number: 4 (lower is better)
Translates to: AGATAPRLRGREGRTLKTPTLQI*DLTKVF
Trigger: AAACACTTTGGTCAGGTCCCAAATTTGAAGGGTGGG...TGTTTTCAGGGTCCTCCCTTCTCTCCCTCTGAGCCTTGGAGCTGTTGCGCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp AGCAGGCGCAACAGCTCCAAGGCTCAGAGGGAGAGAAGGGAGGACCCTGAAAACTGCGCTGAGGAGCTTTaGCTATATCCATTTGGCATT +
Preference number: 4 (lower is better)
Translates to: SRRNSSKAQRERREDPENCAEEL*LYPFGI
Trigger: AATGCCAAATGGATATAGCCAAAGCTCCTCAGCGCA...GTTTTCAGGGTCCTCCCTTCTCTCCCTCTGAGCCTTGGAGCTGTTGCGCCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp TCTCTTGACCAGAAGTCTTTCATCAAGCAGCAGCGAGGGGGTCTGCAGAGAGGATTCTGTGCACAGAACTaGGGAGTCAAAGTGAGGGGC +
Preference number: 4 (lower is better)
Translates to: SLDQKSFIKQQRGGLQRGFCAQN*GVKVRG
Trigger: GCCCCTCACTTTGACTCCCCAGTTCTGTGCACAGAA...TCCTCTCTGCAGACCCCCTCGCTGCTGCTTGATGAAAGACTTCTGGTCAAGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp AGCAGCGAGGGGGTCTGCAGAGAGGAAGGTGCTCTTCTGAGGATCATCTTTGGGACCCTGAAAACAATTTaGGTGTGCACCCACACCTCT +
Preference number: 4 (lower is better)
Translates to: SSEGVCREEGALLRIIFGTLKTI*VCTHTS
Trigger: AGAGGTGTGGGTGCACACCCAAATTGTTTTCAGGGT...CCCAAAGATGATCCTCAGAAGAGCACCTTCCTCTCTGCAGACCCCCTCGCTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp TGCTATACCCGCCAGTCCCTGACAGCAGTTGGCTTTTTGCTCTTAGTACCTGTACTGAGGATAGGGCTCTaGCTCCCCACAAACAGGAGG +
Preference number: 4 (lower is better)
Translates to: CYTRQSLTAVGFLLLVPVLRIGL*LPTNRR
Trigger: CCTCCTGTTTGTGGGGAGCCAGAGCCCTATCCTCAG...TACAGGTACTAAGAGCAAAAAGCCAACTGCTGTCAGGGACTGGCGGGTATAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp GAAGGGCCTTTCAGAGTAGCGGGGAGAAAGAGACGTCACAATTTCCCGGAAAGGAAGGACACTTGCCATTaGGTTTATGGGCCACCCAGC +
Preference number: 4 (lower is better)
Translates to: EGPFRVAGRKRRHNFPERKDTCH*VYGPPS
Trigger: GCTGGGTGGCCCATAAACCCAATGGCAAGTGTCCTT...CCTTTCCGGGAAATTGTGACGTCTCTTTCTCCCCGCTACTCTGAAAGGCCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp AGCAGCGAGGGGGTCTGCAGAGAGGAAGGTGCTCTTCTGAGGATCATCTTTGGGGTCCCTGACAGCAGTTaGCTTTTTGCTCTTAGTACC +
Preference number: 4 (lower is better)
Translates to: SSEGVCREEGALLRIIFGVPDSS*LFALST
Trigger: GGTACTAAGAGCAAAAAGCCAACTGCTGTCAGGGAC...CCCAAAGATGATCCTCAGAAGAGCACCTTCCTCTCTGCAGACCCCCTCGCTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR TCA 90 bp GACACACCCAGGCTGGGCCACGCTTCACTCTGTACACAGAAGCCTCATACTTCTAGGAAGGTGCTCTTCTaGGGATCATCTTTGGGAAAG +
Preference number: 4 (lower is better)
Translates to: DTPRLGHASLCTQKPHTSRKVLF*GSSLGK
Trigger: CTTTCCCAAAGATGATCCTCAGAAGAGCACCTTCCT...AGAAGTATGAGGCTTCTGTGTACAGAGTGAAGCGTGGCCCAGCCTGGGTGTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR TCA 90 bp CCTGAAAACAATTTGGGTGTGCACCCACACCTCTGCCCAGAGGCCTCAGTTGCTGCTGAGCATTTCACTTaGCTAAAGGGAACCTTTGCC +
Preference number: 4 (lower is better)
Translates to: PENNLGVHPHLCPEASVAAEHFT*LKGTFA
Trigger: GGCAAAGGTTCCCTTTAGTCAAGTGAAATGCTCAGC...AGCAACTGAGGCCTCTGGGCAGAGGTGTGGGTGCACACCCAAATTGTTTTCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR TCA 90 bp CTTCATGGGGTTGCTGTGAGGACTGAATGGGTTAGAAGAATGGCTGGCACATGGGGCCCCGGTGTAGGCTaGGCATTTCACTTGACTAAA +
Preference number: 4 (lower is better)
Translates to: LHGVAVRTEWVRRMAGTWGPGVG*AFHLTK
Trigger: TTTAGTCAAGTGAAATGCTCAGCCTACACCGGGGCC...CCATGTGCCAGCCATTCTTCTAACCCATTCAGTCCTCACAGCAACCCCATGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR TCA 90 bp TGCTATACCCGCCAGTCCCTGACAGCAGTTGGCTTTTTGCTCTTAGTACCTGTAAAGGGTTTGGGATTCTaGGAAGCCCATCCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: CYTRQSLTAVGFLLLVPVKGLGF*EAHPGV
Trigger: CACCCCAGGATGGGCTTCTCAGAATCCCAAACCCTT...TACAGGTACTAAGAGCAAAAAGCCAACTGCTGTCAGGGACTGGCGGGTATAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR TCA 90 bp ATGACCACGAGTGCACATCTCTTGACCAGAAGTCTTTCATCAAGCAGCAGCGAGAAGGGTTTGGGATTCTaGGAAGCCCATCCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: MTTSAHLLTRSLSSSSSEKGLGF*EAHPGV
Trigger: CACCCCAGGATGGGCTTCTCAGAATCCCAAACCCTT...CTCGCTGCTGCTTGATGAAAGACTTCTGGTCAAGAGATGTGCACTCGTGGTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR TCA 90 bp ACGAGTGCACATCTCTTGACCAGAAGTCTTTCATCAAGCAGCAGCGAGGGGGTCGCCACAGTTAGTGGGTaGCAGGTCTTTCAGTTTTCC +
Preference number: 4 (lower is better)
Translates to: TSAHLLTRSLSSSSSEGVATVSG*QVFQFS
Trigger: GGAAAACTGAAAGACCTGTCACCCACTAACTGTGGC...GACCCCCTCGCTGCTGCTTGATGAAAGACTTCTGGTCAAGAGATGTGCACTCGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR TCA 90 bp GCAGGCGCAACAGCTCCAAGGCTCAGAGGGAGAGAAGGGAGGACCCTGAAAACATTTTTGAGATCAGATTaGCTTGGAAGGAAGGGACAG +
Preference number: 4 (lower is better)
Translates to: AGATAPRLRGREGRTLKTFLRSD*LGRKGQ
Trigger: CTGTCCCTTCCTTCCAAGTCAATCTGATCTCAAAAA...TGTTTTCAGGGTCCTCCCTTCTCTCCCTCTGAGCCTTGGAGCTGTTGCGCCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR TCA 90 bp AGCAGGCGCAACAGCTCCAAGGCTCAGAGGGAGAGAAGGGAGGACCCTGAAAACTTGGTAAGTTTCTTGTaGAGCCGGACTCACTTTTTG +
Preference number: 4 (lower is better)
Translates to: SRRNSSKAQRERREDPENLVSFL*SRTHFL
Trigger: CAAAAAGTGAGTCCGGCTTCACAAGAAACTTACCAA...GTTTTCAGGGTCCTCCCTTCTCTCCCTCTGAGCCTTGGAGCTGTTGCGCCTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR TCA 90 bp CCTCTGCCCACCCTTCAAATTTGGGACCTGACCAAAGTGTTTAACCCTCGCGTTTGCAGCGTCTCAGGATaGCTTCTCCAAGGTCCTCTT +
Preference number: 4 (lower is better)
Translates to: PLPTLQIWDLTKVFNPRVCSVSG*LLQGPL
Trigger: AAGAGGACCTTGGAGAAGTCATCCTGAGACGCTGCA...AACGCGAGGGTTAAACACTTTGGTCAGGTCCCAAATTTGAAGGGTGGGCAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp CCTGAAAACAATTTGGGTGTGCACCCACACCTCTGCCCAGAGGCCTCAGTTGCTCTGCAGAGAGGAAGGTaGTCTTCTGAGGATCATCTT +
Preference number: 4 (lower is better)
Translates to: PENNLGVHPHLCPEASVALQRGR*SSEDHL
Trigger: AAGATGATCCTCAGAAGAGCACCTTCCTCTCTGCAG...AGCAACTGAGGCCTCTGGGCAGAGGTGTGGGTGCACACCCAAATTGTTTTCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp TGCTATACCCGCCAGTCCCTGACAGCAGTTGGCTTTTTGCTCTTAGTACCTGTATCCAGCTGCTGGAAATaGCCTGCCTCTTGCCACTCT +
Preference number: 4 (lower is better)
Translates to: CYTRQSLTAVGFLLLVPVSSCWK*PASCHS
Trigger: AGAGTGGCAAGAGGCAGGGCATTTCCAGCAGCTGGA...TACAGGTACTAAGAGCAAAAAGCCAACTGCTGTCAGGGACTGGCGGGTATAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp GTTAGTGTTATTCCTAAGCTAAAAAGGAAGTCACCCCTTGCAAAGGCTAGGGCAGGAGACGTGGCTGGCTaGACTGTGGGTCACAGCAGG +
Preference number: 4 (lower is better)
Translates to: VSVIPKLKRKSPLAKARAGDVAG*TVGHSR
Trigger: CCTGCTGTGACCCACAGTGCAGCCAGCCACGTCTCC...TGCCCTAGCCTTTGCAAGGGGTGACTTCCTTTTTAGCTTAGGAATAACACTAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp GAAGGGCCTTTCAGAGTAGCGGGGAGAAAGAGACGTCACAATTTCCCGGAAAGGGAGAGGTCAAGGGTTTaGGATTCTGAGAAGCCCATC +
Preference number: 4 (lower is better)
Translates to: EGPFRVAGRKRRHNFPERERSRV*DSEKPI
Trigger: GATGGGCTTCTCAGAATCCCAAACCCTTGACCTCTC...CCTTTCCGGGAAATTGTGACGTCTCTTTCTCCCCGCTACTCTGAAAGGCCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp CCTCTGCCCACCCTTCAAATTTGGGACCTGACCAAAGTGTTTAACCCTCGCGTTTTTGCGAGAGTGTGGTaGCTAGCTCCAGAAGGAGGA +
Preference number: 4 (lower is better)
Translates to: PLPTLQIWDLTKVFNPRVFARVW*LAPEGG
Trigger: TCCTCCTTCTGGAGCTAGCCACCACACTCTCGCAAA...AACGCGAGGGTTAAACACTTTGGTCAGGTCCCAAATTTGAAGGGTGGGCAGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp ATGACCACGAGTGCACATCTCTTGACCAGAAGTCTTTCATCAAGCAGCAGCGAGGCATTCGGTGGCTTGTaGCAGCATAACTCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: MTTSAHLLTRSLSSSSSEAFGGL*QHNSSL
Trigger: GAGGCTGGAGTTATGCTGCCACAAGCCACCGAATGC...CTCGCTGCTGCTTGATGAAAGACTTCTGGTCAAGAGATGTGCACTCGTGGTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR TCA 90 bp ACGAGTGCACATCTCTTGACCAGAAGTCTTTCATCAAGCAGCAGCGAGGGGGTCGCTGAGCATTTCACTTaGCTAAAGGGAACCTTTGCC +
Preference number: 4 (lower is better)
Translates to: TSAHLLTRSLSSSSSEGVAEHFT*LKGTFA
Trigger: GGCAAAGGTTCCCTTTAGTCAAGTGAAATGCTCAGC...GACCCCCTCGCTGCTGCTTGATGAAAGACTTCTGGTCAAGAGATGTGCACTCGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR TCA 90 bp ATGACCACGAGTGCACATCTCTTGACCAGAAGTCTTTCATCAAGCAGCAGCGAGGGCCCCGGTGTAGGCTaGGCATTTCACTTGACTAAA +
Preference number: 4 (lower is better)
Translates to: MTTSAHLLTRSLSSSSSEGPGVG*AFHLTK
Trigger: TTTAGTCAAGTGAAATGCTCAGCCTACACCGGGGCC...CTCGCTGCTGCTTGATGAAAGACTTCTGGTCAAGAGATGTGCACTCGTGGTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR TCA 90 bp TGCTATACCCGCCAGTCCCTGACAGCAGTTGGCTTTTTGCTCTTAGTACCTGTATTAACCCTCGCGTTGTaGGGAGAGGTCAAGGGTTTG +
Preference number: 4 (lower is better)
Translates to: CYTRQSLTAVGFLLLVPVLTLAL*GEVKGL
Trigger: CAAACCCTTGACCTCTCCTCACAACGCGAGGGTTAA...TACAGGTACTAAGAGCAAAAAGCCAACTGCTGTCAGGGACTGGCGGGTATAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR TCA 90 bp TCTCTTGACCAGAAGTCTTTCATCAAGCAGCAGCGAGGGGGTCTGCAGAGAGGACTTTCTAGAGTCATCTaGGGGAAGATGAGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: SLDQKSFIKQQRGGLQRGLSRVI*GKMRLC
Trigger: ACAGAGCCTCATCTTCCCTCAGATGACTCTAGAAAG...TCCTCTCTGCAGACCCCCTCGCTGCTGCTTGATGAAAGACTTCTGGTCAAGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR TCA 90 bp AGCAGCGAGGGGGTCTGCAGAGAGGAAGGTGCTCTTCTGAGGATCATCTTTGGGTTTTTGAGATCAGATTaGCTTGGAAGGAAGGGACAG +
Preference number: 4 (lower is better)
Translates to: SSEGVCREEGALLRIIFGFLRSD*LGRKGQ
Trigger: CTGTCCCTTCCTTCCAAGTCAATCTGATCTCAAAAA...CCCAAAGATGATCCTCAGAAGAGCACCTTCCTCTCTGCAGACCCCCTCGCTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR TCA 90 bp GTTAGTGTTATTCCTAAGCTAAAAAGGAAGTCACCCCTTGCAAAGGCTAGGGCATGCCTGAAACCCAATTaGGAGCCCTCCCCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: VSVIPKLKRKSPLAKARACLKPN*EPSPSW
Trigger: CCAGGAGGGGGAGGGCTCTCAATTGGGTTTCAGGCA...TGCCCTAGCCTTTGCAAGGGGTGACTTCCTTTTTAGCTTAGGAATAACACTAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp CCTCTGCCCACCCTTCAAATTTGGGACCTGACCAAAGTGTTTAACCCTCGCGTTAAAACAATTTGGGTGTaGACCCACACCTCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: PLPTLQIWDLTKVFNPRVKTIWV*THTSAQ
Trigger: CTGGGCAGAGGTGTGGGTGCACACCCAAATTGTTTT...AACGCGAGGGTTAAACACTTTGGTCAGGTCCCAAATTTGAAGGGTGGGCAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp GTTAGTGTTATTCCTAAGCTAAAAAGGAAGTCACCCCTTGCAAAGGCTAGGGCAAGGGCAAGGCTTCTGTaGCGAGCGAGGGTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: VSVIPKLKRKSPLAKARARARLL*RARVLL
Trigger: AAGCAGCACCCTCGCTCGCCACAGAAGCCTTGCCCT...TGCCCTAGCCTTTGCAAGGGGTGACTTCCTTTTTAGCTTAGGAATAACACTAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp GTTAGTGTTATTCCTAAGCTAAAAAGGAAGTCACCCCTTGCAAAGGCTAGGGCACTCCATGCTGGGCTTTaGCACCTGGAGGGCAAGGCT +
Preference number: 4 (lower is better)
Translates to: VSVIPKLKRKSPLAKARALHAGL*HLEGKA
Trigger: AGCCTTGCCCTCCAGGTGCCAAAGCCCAGCATGGAG...TGCCCTAGCCTTTGCAAGGGGTGACTTCCTTTTTAGCTTAGGAATAACACTAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp GTTAGTGTTATTCCTAAGCTAAAAAGGAAGTCACCCCTTGCAAAGGCTAGGGCAACAGCAGGATGGGGGTaGGGCAGCTTTGTGGTGGGA +
Preference number: 4 (lower is better)
Translates to: VSVIPKLKRKSPLAKARATAGWG*GSFVVG
Trigger: TCCCACCACAAAGCTGCCCCACCCCCATCCTGCTGT...TGCCCTAGCCTTTGCAAGGGGTGACTTCCTTTTTAGCTTAGGAATAACACTAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp ATGACCACGAGTGCACATCTCTTGACCAGAAGTCTTTCATCAAGCAGCAGCGAGGGAAGGAAGGGACAGTaGGCTTCTCCAATAGAGCCT +
Preference number: 4 (lower is better)
Translates to: MTTSAHLLTRSLSSSSSEGRKGQ*ASPIEP
Trigger: AGGCTCTATTGGAGAAGCCCACTGTCCCTTCCTTCC...CTCGCTGCTGCTTGATGAAAGACTTCTGGTCAAGAGATGTGCACTCGTGGTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp ATGACCACGAGTGCACATCTCTTGACCAGAAGTCTTTCATCAAGCAGCAGCGAGAAGGACACTTGCCATTaGGTTTATGGGCCACCCAGC +
Preference number: 4 (lower is better)
Translates to: MTTSAHLLTRSLSSSSSEKDTCH*VYGPPS
Trigger: GCTGGGTGGCCCATAAACCCAATGGCAAGTGTCCTT...CTCGCTGCTGCTTGATGAAAGACTTCTGGTCAAGAGATGTGCACTCGTGGTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR TCA 90 bp GAAGGGCCTTTCAGAGTAGCGGGGAGAAAGAGACGTCACAATTTCCCGGAAAGGGCCGGACTCACTTTTTaGGATCAGATTGACTTGGAA +
Preference number: 4 (lower is better)
Translates to: EGPFRVAGRKRRHNFPERAGLTF*DQIDLE
Trigger: TTCCAAGTCAATCTGATCTCAAAAAGTGAGTCCGGC...CCTTTCCGGGAAATTGTGACGTCTCTTTCTCCCCGCTACTCTGAAAGGCCCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR TCA 90 bp ATGACCACGAGTGCACATCTCTTGACCAGAAGTCTTTCATCAAGCAGCAGCGAGAATATAGGGCAGCCCTaGGTTCTCCCATTTCTCAGG +
Preference number: 4 (lower is better)
Translates to: MTTSAHLLTRSLSSSSSENIGQP*VLPFLR
Trigger: CCTGAGAAATGGGAGAACTCAGGGCTGCCCTATATT...CTCGCTGCTGCTTGATGAAAGACTTCTGGTCAAGAGATGTGCACTCGTGGTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR TCA 90 bp TGCTATACCCGCCAGTCCCTGACAGCAGTTGGCTTTTTGCTCTTAGTACCTGTAGAGAAGGGAGGACCCTaGAAACAATTTGGGTGTGCA +
Preference number: 4 (lower is better)
Translates to: CYTRQSLTAVGFLLLVPVEKGGP*KQFGCA
Trigger: TGCACACCCAAATTGTTTTCAGGGTCCTCCCTTCTC...TACAGGTACTAAGAGCAAAAAGCCAACTGCTGTCAGGGACTGGCGGGTATAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp CTTCATGGGGTTGCTGTGAGGACTGAATGGGTTAGAAGAATGGCTGGCACATGGCTGCAGAGAGGAAGGTaGTCTTCTGAGGATCATCTT +
Preference number: 4 (lower is better)
Translates to: LHGVAVRTEWVRRMAGTWLQRGR*SSEDHL
Trigger: AAGATGATCCTCAGAAGAGCACCTTCCTCTCTGCAG...CCATGTGCCAGCCATTCTTCTAACCCATTCAGTCCTCACAGCAACCCCATGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp GTTAGTGTTATTCCTAAGCTAAAAAGGAAGTCACCCCTTGCAAAGGCTAGGGCACCCAGGTCCTCCCTCTaGCCACCCTTCAAATTTGGG +
Preference number: 4 (lower is better)
Translates to: VSVIPKLKRKSPLAKARAPRSSL*PPFKFG
Trigger: CCCAAATTTGAAGGGTGGGCAGAGGGAGGACCTGGG...TGCCCTAGCCTTTGCAAGGGGTGACTTCCTTTTTAGCTTAGGAATAACACTAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp CCTCTGCCCACCCTTCAAATTTGGGACCTGACCAAAGTGTTTAACCCTCGCGTTAGCCTCATACTTCTGTaGACAGAACTGGGGAGTCAA +
Preference number: 4 (lower is better)
Translates to: PLPTLQIWDLTKVFNPRVSLILL*TELGSQ
Trigger: TTGACTCCCCAGTTCTGTGCACAGAAGTATGAGGCT...AACGCGAGGGTTAAACACTTTGGTCAGGTCCCAAATTTGAAGGGTGGGCAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp AGCAGCGAGGGGGTCTGCAGAGAGGAAGGTGCTCTTCTGAGGATCATCTTTGGGTTCTCCAATAGAGCCTaGTTGGAGAGAAATCTTTCT +
Preference number: 4 (lower is better)
Translates to: SSEGVCREEGALLRIIFGFSNRA*LERNLS
Trigger: AGAAAGATTTCTCTCCAAGCAGGCTCTATTGGAGAA...CCCAAAGATGATCCTCAGAAGAGCACCTTCCTCTCTGCAGACCCCCTCGCTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp TGCTATACCCGCCAGTCCCTGACAGCAGTTGGCTTTTTGCTCTTAGTACCTGTAGAGAGGTCAAGGGTTTaGGATTCTGAGAAGCCCATC +
Preference number: 4 (lower is better)
Translates to: CYTRQSLTAVGFLLLVPVERSRV*DSEKPI
Trigger: GATGGGCTTCTCAGAATCCCAAACCCTTGACCTCTC...TACAGGTACTAAGAGCAAAAAGCCAACTGCTGTCAGGGACTGGCGGGTATAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp GTTAGTGTTATTCCTAAGCTAAAAAGGAAGTCACCCCTTGCAAAGGCTAGGGCATTTGGAGCTGGGGAGTaGCAAGCCAGAGCTCACTCC +
Preference number: 4 (lower is better)
Translates to: VSVIPKLKRKSPLAKARAFGAGE*QARAHS
Trigger: GGAGTGAGCTCTGGCTTGCCACTCCCCAGCTCCAAA...TGCCCTAGCCTTTGCAAGGGGTGACTTCCTTTTTAGCTTAGGAATAACACTAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp AATGACAACCGGCCCATCTTTCTGCAGAGCAGCTATGAGGCCAGCGTCCCTGAGGTTTTCCTGGAGTTTTaGATCAAGATGAGGCTAGAA +
Preference number: 4 (lower is better)
Translates to: NDNRPIFLQSSYEASVPEVFLEF*IKMRLE
Trigger: TTCTAGCCTCATCTTGATCCAAAACTCCAGGAAAAC...CTCAGGGACGCTGGCCTCATAGCTGCTCTGCAGAAAGATGGGCCGGTTGTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp ATGACCACGAGTGCACATCTCTTGACCAGAAGTCTTTCATCAAGCAGCAGCGAGGAGATCAGATTGACTTaGAAGGAAGGGACAGTGGGC +
Preference number: 4 (lower is better)
Translates to: MTTSAHLLTRSLSSSSSEEIRLT*KEGTVG
Trigger: GCCCACTGTCCCTTCCTTCCAAGTCAATCTGATCTC...CTCGCTGCTGCTTGATGAAAGACTTCTGGTCAAGAGATGTGCACTCGTGGTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR TCA 90 bp CCTCTGCCCACCCTTCAAATTTGGGACCTGACCAAAGTGTTTAACCCTCGCGTTCGAGTGCACATCTCTTaGCCAGAAGTCTTTCATCAA +
Preference number: 4 (lower is better)
Translates to: PLPTLQIWDLTKVFNPRVRVHIS*PEVFHQ
Trigger: TTGATGAAAGACTTCTGGTCAAGAGATGTGCACTCG...AACGCGAGGGTTAAACACTTTGGTCAGGTCCCAAATTTGAAGGGTGGGCAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR TCA 90 bp GAAGGGCCTTTCAGAGTAGCGGGGAGAAAGAGACGTCACAATTTCCCGGAAAGGTTCAAATTTGGGACCTaGCCAAAGTGTTTAACCCTC +
Preference number: 4 (lower is better)
Translates to: EGPFRVAGRKRRHNFPERFKFGT*PKCLTL
Trigger: GAGGGTTAAACACTTTGGTCAGGTCCCAAATTTGAA...CCTTTCCGGGAAATTGTGACGTCTCTTTCTCCCCGCTACTCTGAAAGGCCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp TCTCTTGACCAGAAGTCTTTCATCAAGCAGCAGCGAGGGGGTCTGCAGAGAGGATCTCAAATGTCCCTCTaGCTTTCTCTTGTAAGGACA +
Preference number: 4 (lower is better)
Translates to: SLDQKSFIKQQRGGLQRGSQMSL*LSLVRT
Trigger: TGTCCTTACAAGAGAAAGGCAGAGGGACATTTGAGA...TCCTCTCTGCAGACCCCCTCGCTGCTGCTTGATGAAAGACTTCTGGTCAAGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp GAAGGGCCTTTCAGAGTAGCGGGGAGAAAGAGACGTCACAATTTCCCGGAAAGGTCTCAAATGTCCCTCTaGCTTTCTCTTGTAAGGACA +
Preference number: 4 (lower is better)
Translates to: EGPFRVAGRKRRHNFPERSQMSL*LSLVRT
Trigger: TGTCCTTACAAGAGAAAGGCAGAGGGACATTTGAGA...CCTTTCCGGGAAATTGTGACGTCTCTTTCTCCCCGCTACTCTGAAAGGCCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp GAAGGGCCTTTCAGAGTAGCGGGGAGAAAGAGACGTCACAATTTCCCGGAAAGGCCAATAGAGCCTGCTTaGAGAGAAATCTTTCTAGAG +
Preference number: 4 (lower is better)
Translates to: EGPFRVAGRKRRHNFPERPIEPA*REIFLE
Trigger: CTCTAGAAAGATTTCTCTCCAAGCAGGCTCTATTGG...CCTTTCCGGGAAATTGTGACGTCTCTTTCTCCCCGCTACTCTGAAAGGCCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp TGCTATACCCGCCAGTCCCTGACAGCAGTTGGCTTTTTGCTCTTAGTACCTGTAACCCTGAAAACAATTTaGGTGTGCACCCACACCTCT +
Preference number: 4 (lower is better)
Translates to: CYTRQSLTAVGFLLLVPVTLKTI*VCTHTS
Trigger: AGAGGTGTGGGTGCACACCCAAATTGTTTTCAGGGT...TACAGGTACTAAGAGCAAAAAGCCAACTGCTGTCAGGGACTGGCGGGTATAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp TGCTATACCCGCCAGTCCCTGACAGCAGTTGGCTTTTTGCTCTTAGTACCTGTAGTCCCTGACAGCAGTTaGCTTTTTGCTCTTAGTACC +
Preference number: 4 (lower is better)
Translates to: CYTRQSLTAVGFLLLVPVVPDSS*LFALST
Trigger: GGTACTAAGAGCAAAAAGCCAACTGCTGTCAGGGAC...TACAGGTACTAAGAGCAAAAAGCCAACTGCTGTCAGGGACTGGCGGGTATAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR TCA 90 bp TGCTATACCCGCCAGTCCCTGACAGCAGTTGGCTTTTTGCTCTTAGTACCTGTACAATACTACTCTTACTaGAATCCTAGAGCCAGCGAG +
Preference number: 4 (lower is better)
Translates to: CYTRQSLTAVGFLLLVPVQYYSY*NPRASE
Trigger: CTCGCTGGCTCTAGGATTTCAGTAAGAGTAGTATTG...TACAGGTACTAAGAGCAAAAAGCCAACTGCTGTCAGGGACTGGCGGGTATAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp ATGACCACGAGTGCACATCTCTTGACCAGAAGTCTTTCATCAAGCAGCAGCGAGGACAAAAAGGACCCATaGTGCCAAGAGAATGTTCCT +
Preference number: 4 (lower is better)
Translates to: MTTSAHLLTRSLSSSSSEDKKDP*CQENVP
Trigger: AGGAACATTCTCTTGGCAGCATGGGTCCTTTTTGTC...CTCGCTGCTGCTTGATGAAAGACTTCTGGTCAAGAGATGTGCACTCGTGGTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp ACGAGTGCACATCTCTTGACCAGAAGTCTTTCATCAAGCAGCAGCGAGGGGGTCCTTAGTACCTGTATCTaGATCCTAAATTTGCCACGA +
Preference number: 4 (lower is better)
Translates to: TSAHLLTRSLSSSSSEGVLSTCI*ILNLPR
Trigger: TCGTGGCAAATTTAGGATGCAGATACAGGTACTAAG...GACCCCCTCGCTGCTGCTTGATGAAAGACTTCTGGTCAAGAGATGTGCACTCGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CCA 90 bp CCTCTGCCCACCCTTCAAATTTGGGACCTGACCAAAGTGTTTAACCCTCGCGTTCCAATAGAGCCTGCTTaGAGAGAAATCTTTCTAGAG +
Preference number: 4 (lower is better)
Translates to: PLPTLQIWDLTKVFNPRVPIEPA*REIFLE
Trigger: CTCTAGAAAGATTTCTCTCCAAGCAGGCTCTATTGG...AACGCGAGGGTTAAACACTTTGGTCAGGTCCCAAATTTGAAGGGTGGGCAGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR TCA 90 bp ATGACCACGAGTGCACATCTCTTGACCAGAAGTCTTTCATCAAGCAGCAGCGAGTTCAAATTTGGGACCTaGCCAAAGTGTTTAACCCTC +
Preference number: 4 (lower is better)
Translates to: MTTSAHLLTRSLSSSSSEFKFGT*PKCLTL
Trigger: GAGGGTTAAACACTTTGGTCAGGTCCCAAATTTGAA...CTCGCTGCTGCTTGATGAAAGACTTCTGGTCAAGAGATGTGCACTCGTGGTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR TCA 90 bp GTTAGTGTTATTCCTAAGCTAAAAAGGAAGTCACCCCTTGCAAAGGCTAGGGCAAATATAGGGCAGCCCTaGGTTCTCCCATTTCTCAGG +
Preference number: 4 (lower is better)
Translates to: VSVIPKLKRKSPLAKARANIGQP*VLPFLR
Trigger: CCTGAGAAATGGGAGAACTCAGGGCTGCCCTATATT...TGCCCTAGCCTTTGCAAGGGGTGACTTCCTTTTTAGCTTAGGAATAACACTAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp GTTAGTGTTATTCCTAAGCTAAAAAGGAAGTCACCCCTTGCAAAGGCTAGGGCAAAAACAATTTGGGTGTaGACCCACACCTCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: VSVIPKLKRKSPLAKARAKTIWV*THTSAQ
Trigger: CTGGGCAGAGGTGTGGGTGCACACCCAAATTGTTTT...TGCCCTAGCCTTTGCAAGGGGTGACTTCCTTTTTAGCTTAGGAATAACACTAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR GCA 90 bp GTTAGTGTTATTCCTAAGCTAAAAAGGAAGTCACCCCTTGCAAAGGCTAGGGCAAGCCTCATACTTCTGTaGACAGAACTGGGGAGTCAA +
Preference number: 4 (lower is better)
Translates to: VSVIPKLKRKSPLAKARASLILL*TELGSQ
Trigger: TTGACTCCCCAGTTCTGTGCACAGAAGTATGAGGCT...TGCCCTAGCCTTTGCAAGGGGTGACTTCCTTTTTAGCTTAGGAATAACACTAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR TCA 90 bp GTTAGTGTTATTCCTAAGCTAAAAAGGAAGTCACCCCTTGCAAAGGCTAGGGCAGCCGGACTCACTTTTTaGGATCAGATTGACTTGGAA +
Preference number: 4 (lower is better)
Translates to: VSVIPKLKRKSPLAKARAAGLTF*DQIDLE
Trigger: TTCCAAGTCAATCTGATCTCAAAAAGTGAGTCCGGC...TGCCCTAGCCTTTGCAAGGGGTGACTTCCTTTTTAGCTTAGGAATAACACTAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR CAA 72 bp TTAGTGGGTGACAGGTCTTTCAGTTTTCCTGGAGTTTaGGATCAAGATGAGGCTAGAAAGATTAATTGGAGC +
Preference number: 4 (lower is better)
Translates to: LVGDRSFSFPGV*DQDEARKINWS
Trigger: GCTCCAATTAATCTTTCTAGCCTCATCTTGATCCAAAACTCCAGGAAAACTGAAAGACCTGTCACCCACTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
3UTR CAA 72 bp CTTTTTGCTCTTAGTACCTGTATCTGCATCCTAAATTaGCCACGACAAACTACCACAAACTTAAAACAGCAG +
Preference number: 4 (lower is better)
Translates to: LFALSTCICILN*PRQTTTNLKQQ
Trigger: CTGCTGTTTTAAGTTTGTGGTAGTTTGTCGTGGCAAATTTAGGATGCAGATACAGGTACTAAGAGCAAAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS CCA 90 bp CTCATGGCTCCTGTGATTCCAGCCGCAGTGGCCTGTGGCCGTCCGTaGACTGGAGGCCTCACCCGCGGCAGGCCTTCACTCTCCTGCCTC +
Preference number: 5 (lower is better)
Translates to: LMAPVIPAAVACGRP*TGGLTRGRPSLSCL
Trigger: GAGGCAGGAGAGTGAAGGCCTGCCGCGGGTGAGGCCTCCAGTCCACGGACGGCCACAGGCCACTGCGGCTGGAATCACAGGAGCCATGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398786.2
CDS CCA 90 bp GCCCTCTGTGCTCATGGCTCCTGTGATTCCAGCCGCAGTGGCCTGTaGCCGTCCGTGGACTGGAGGCCTCACCCGCGGCAGGCCTTCACT +
Preference number: 5 (lower is better)
Translates to: ALCAHGSCDSSRSGL*PSVDWRPHPRQAFT
Trigger: AGTGAAGGCCTGCCGCGGGTGAGGCCTCCAGTCCACGGACGGCCACAGGCCACTGCGGCTGGAATCACAGGAGCCATGAGCACAGAGGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398786.2
CDS CCA 90 bp TGCTCATGGCTCCTCAGAGCCAGACCCCAGCCGTCCGGAGCTCCGTaGAGAGGTCTTCTCAGCTGTGGAAGGGAGGCCCAAGGAGCCCTG +
Preference number: 5 (lower is better)
Translates to: CSWLLRARPQPSGAP*RGLLSCGREAQGAL
Trigger: CAGGGCTCCTTGGGCCTCCCTTCCACAGCTGAGAAGACCTCTCCACGGAGCTCCGGACGGCTGGGGTCTGGCTCTGAGGAGCCATGAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441508.4
CDS-3UTR CAA 90 bp GCAGGCGCAACAGCTCCAAGGCTCAGAGGGAGAGAAGGGAGGACCCTGAAAACATCACAGTGGCTGCGGTaGTCCTCGGGGCCCGGCAGG +
Preference number: 5 (lower is better)
Translates to: AGATAPRLRGREGRTLKTSQWLR*SSGPGR
Trigger: CCTGCCGGGCCCCGAGGACAACCGCAGCCACTGTGA...TGTTTTCAGGGTCCTCCCTTCTCTCCCTCTGAGCCTTGGAGCTGTTGCGCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CAA 90 bp CCACAGATAGCATCCCTAGTGTGGGCAGGACTTGGGACCCCACAGCTGTCCTGGGAGAGCCCCGAGGTTTaGCCCCAGCACTGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: PQIASLVWAGLGTPQLSWESPEV*PQHWAS
Trigger: GCTGGCCCAGTGCTGGGGCAAAACCTCGGGGCTCTC...CCAGGACAGCTGTGGGGTCCCAAGTCCTGCCCACACTAGGGATGCTATCTGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CAA 90 bp CCACAGATAGCATCCCTAGTGTGGGCAGGACTTGGGACCCCACAGCTGTCCTGGTCCAGCGCGGCCGGCTaGCAGAGCGTCATGAACAGC +
Preference number: 5 (lower is better)
Translates to: PQIASLVWAGLGTPQLSWSSAAG*QSVMNS
Trigger: GCTGTTCATGACGCTCTGCAAGCCGGCCGCGCTGGA...CCAGGACAGCTGTGGGGTCCCAAGTCCTGCCCACACTAGGGATGCTATCTGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CAA 90 bp AGGCTAGGGCAGATGGGGCGGAACAGGGCACCTCTCTGGCCGGTGCCCGGGAGTGATGTGGGGGCATGTTaGTGGACACCCCATTACATC +
Preference number: 5 (lower is better)
Translates to: RLGQMGRNRAPLWPVPGSDVGAC*WTPHYI
Trigger: GATGTAATGGGGTGTCCACAAACATGCCCCCACATC...ACTCCCGGGCACCGGCCAGAGAGGTGCCCTGTTCCGCCCCATCTGCCCTAGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CAA 90 bp AGCAGCGAGGGGGTCTGCAGAGAGGAAGGTGCTCTTCTGAGGATCATCTTTGGGTGGGGAGGGGGTCAGTaGCCTCTGCAAGGGTCCCGG +
Preference number: 5 (lower is better)
Translates to: SSEGVCREEGALLRIIFGWGGGQ*PLQGSR
Trigger: CCGGGACCCTTGCAGAGGCAACTGACCCCCTCCCCA...CCCAAAGATGATCCTCAGAAGAGCACCTTCCTCTCTGCAGACCCCCTCGCTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CAA 90 bp GACACACCCAGGCTGGGCCACGCTTCACTCTGTACACAGAAGCCTCATACTTCTTGGGGAGGGGGTCAGTaGCCTCTGCAAGGGTCCCGG +
Preference number: 5 (lower is better)
Translates to: DTPRLGHASLCTQKPHTSWGGGQ*PLQGSR
Trigger: CCGGGACCCTTGCAGAGGCAACTGACCCCCTCCCCA...AGAAGTATGAGGCTTCTGTGTACAGAGTGAAGCGTGGCCCAGCCTGGGTGTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CAA 90 bp AGCAGGCGCAACAGCTCCAAGGCTCAGAGGGAGAGAAGGGAGGACCCTGAAAACCTTGGAGAGCCCTGTTaGCTCCTCCTCCCAGCTGGC +
Preference number: 5 (lower is better)
Translates to: SRRNSSKAQRERREDPENLGEPC*LLLPAG
Trigger: GCCAGCTGGGAGGAGGAGCAAACAGGGCTCTCCAAG...GTTTTCAGGGTCCTCCCTTCTCTCCCTCTGAGCCTTGGAGCTGTTGCGCCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CAA 90 bp AATGACAACCGGCCCATCTTTCTGCAGAGCAGCTATGAGGCCAGCGTCCCTGAGGCCAGAGCTCACTCCTaGGGGAGACGTGGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: NDNRPIFLQSSYEASVPEARAHS*GRRGWL
Trigger: CAGCCAGCCACGTCTCCCCAAGGAGTGAGCTCTGGC...CTCAGGGACGCTGGCCTCATAGCTGCTCTGCAGAAAGATGGGCCGGTTGTCATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CAA 90 bp GACAGAAGCGTGGGAGGCTGGCAATGCTCCCCTCCCTGCATCGGGACCAGGAGGAAAGGAAGTCACCCCTaGCAAAGGCTAGGGCAGATG +
Preference number: 5 (lower is better)
Translates to: DRSVGGWQCSPPCIGTRRKGSHP*QRLGQM
Trigger: CATCTGCCCTAGCCTTTGCAAGGGGTGACTTCCTTT...CCTCCTGGTCCCGATGCAGGGAGGGGAGCATTGCCAGCCTCCCACGCTTCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CAA 90 bp GCAGGCGCAACAGCTCCAAGGCTCAGAGGGAGAGAAGGGAGGACCCTGAAAACAGTTACGAGCCCCAGGTaGTACCCTGTGGAGCCTCAG +
Preference number: 5 (lower is better)
Translates to: AGATAPRLRGREGRTLKTVTSPR*YPVEPQ
Trigger: CTGAGGCTCCACAGGGTACAACCTGGGGCTCGTAAC...TGTTTTCAGGGTCCTCCCTTCTCTCCCTCTGAGCCTTGGAGCTGTTGCGCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CAA 90 bp GAAGGGCCTTTCAGAGTAGCGGGGAGAAAGAGACGTCACAATTTCCCGGAAAGGGAGAGCCCCGAGGTTTaGCCCCAGCACTGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: EGPFRVAGRKRRHNFPERESPEV*PQHWAS
Trigger: GCTGGCCCAGTGCTGGGGCAAAACCTCGGGGCTCTC...CCTTTCCGGGAAATTGTGACGTCTCTTTCTCCCCGCTACTCTGAAAGGCCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CAA 90 bp CCACAGATAGCATCCCTAGTGTGGGCAGGACTTGGGACCCCACAGCTGTCCTGGTGGGGTGGGACTGCTTaGACGGGTCATCAGCAAAGC +
Preference number: 5 (lower is better)
Translates to: PQIASLVWAGLGTPQLSWWGGTA*TGHQQS
Trigger: GCTTTGCTGATGACCCGTCAAAGCAGTCCCACCCCA...CCAGGACAGCTGTGGGGTCCCAAGTCCTGCCCACACTAGGGATGCTATCTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CAA 90 bp ACGAGTGCACATCTCTTGACCAGAAGTCTTTCATCAAGCAGCAGCGAGGGGGTCGGGGGTGGGGCAGCTTaGTGGTGGGATCCTGGCCAG +
Preference number: 5 (lower is better)
Translates to: TSAHLLTRSLSSSSSEGVGGGAA*WWDPGQ
Trigger: CTGGCCAGGATCCCACCACAAAGCTGCCCCACCCCC...GACCCCCTCGCTGCTGCTTGATGAAAGACTTCTGGTCAAGAGATGTGCACTCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CAA 90 bp GGCCACGCTTCACTCTGTACACAGAAGCCTCATACTTCTGTGCACAGAACTGGGGGGGGTGGGGCAGCTTaGTGGTGGGATCCTGGCCAG +
Preference number: 5 (lower is better)
Translates to: GHASLCTQKPHTSVHRTGGGGAA*WWDPGQ
Trigger: CTGGCCAGGATCCCACCACAAAGCTGCCCCACCCCC...CCCAGTTCTGTGCACAGAAGTATGAGGCTTCTGTGTACAGAGTGAAGCGTGGCC
60% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CAA 90 bp GCAGGCGCAACAGCTCCAAGGCTCAGAGGGAGAGAAGGGAGGACCCTGAAAACATGTGTCCCAGACTGCTaGGGCCACTGTCTTCCTGCA +
Preference number: 5 (lower is better)
Translates to: AGATAPRLRGREGRTLKTCVPDC*GHCLPA
Trigger: TGCAGGAAGACAGTGGCCCAAGCAGTCTGGGACACA...TGTTTTCAGGGTCCTCCCTTCTCTCCCTCTGAGCCTTGGAGCTGTTGCGCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CAA 90 bp AATGACAACCGGCCCATCTTTCTGCAGAGCAGCTATGAGGCCAGCGTCCCTGAGGTTACGAGCCCCAGGTaGTACCCTGTGGAGCCTCAG +
Preference number: 5 (lower is better)
Translates to: NDNRPIFLQSSYEASVPEVTSPR*YPVEPQ
Trigger: CTGAGGCTCCACAGGGTACAACCTGGGGCTCGTAAC...CTCAGGGACGCTGGCCTCATAGCTGCTCTGCAGAAAGATGGGCCGGTTGTCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CAA 90 bp GACACACCCAGGCTGGGCCACGCTTCACTCTGTACACAGAAGCCTCATACTTCTTCTCCATGCTGGGCTTaGGCACCTGGAGGGCAAGGC +
Preference number: 5 (lower is better)
Translates to: DTPRLGHASLCTQKPHTSSPCWA*APGGQG
Trigger: GCCTTGCCCTCCAGGTGCCAAAGCCCAGCATGGAGA...AGAAGTATGAGGCTTCTGTGTACAGAGTGAAGCGTGGCCCAGCCTGGGTGTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CAA 90 bp GGCCACGCTTCACTCTGTACACAGAAGCCTCATACTTCTGTGCACAGAACTGGGGCCAGAGCTCACTCCTaGGGGAGACGTGGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: GHASLCTQKPHTSVHRTGARAHS*GRRGWL
Trigger: CAGCCAGCCACGTCTCCCCAAGGAGTGAGCTCTGGC...CCCAGTTCTGTGCACAGAAGTATGAGGCTTCTGTGTACAGAGTGAAGCGTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CAA 90 bp AATGACAACCGGCCCATCTTTCTGCAGAGCAGCTATGAGGCCAGCGTCCCTGAGGTGCCTGAAACCCAATaGAGAGCCCTCCCCCTCCTG +
Preference number: 5 (lower is better)
Translates to: NDNRPIFLQSSYEASVPEVPETQ*RALPLL
Trigger: CAGGAGGGGGAGGGCTCTCAATTGGGTTTCAGGCAC...CTCAGGGACGCTGGCCTCATAGCTGCTCTGCAGAAAGATGGGCCGGTTGTCATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CAA 90 bp AGCAGCGAGGGGGTCTGCAGAGAGGAAGGTGCTCTTCTGAGGATCATCTTTGGGGTGCCTGAAACCCAATaGAGAGCCCTCCCCCTCCTG +
Preference number: 5 (lower is better)
Translates to: SSEGVCREEGALLRIIFGVPETQ*RALPLL
Trigger: CAGGAGGGGGAGGGCTCTCAATTGGGTTTCAGGCAC...CCCAAAGATGATCCTCAGAAGAGCACCTTCCTCTCTGCAGACCCCCTCGCTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CAA 90 bp CCTGAAAACAATTTGGGTGTGCACCCACACCTCTGCCCAGAGGCCTCAGTTGCTGCTTTCACAGAGCCCTaGGCCGAGGCTCCCCTCTTG +
Preference number: 5 (lower is better)
Translates to: PENNLGVHPHLCPEASVAAFTEP*AEAPLL
Trigger: CAAGAGGGGAGCCTCGGCCAAGGGCTCTGTGAAAGC...AGCAACTGAGGCCTCTGGGCAGAGGTGTGGGTGCACACCCAAATTGTTTTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CAA 90 bp CTTCATGGGGTTGCTGTGAGGACTGAATGGGTTAGAAGAATGGCTGGCACATGGTCCAGCGCGGCCGGCTaGCAGAGCGTCATGAACAGC +
Preference number: 5 (lower is better)
Translates to: LHGVAVRTEWVRRMAGTWSSAAG*QSVMNS
Trigger: GCTGTTCATGACGCTCTGCAAGCCGGCCGCGCTGGA...CCATGTGCCAGCCATTCTTCTAACCCATTCAGTCCTCACAGCAACCCCATGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CAA 90 bp AATGACAACCGGCCCATCTTTCTGCAGAGCAGCTATGAGGCCAGCGTCCCTGAGTGTGTCCCAGACTGCTaGGGCCACTGTCTTCCTGCA +
Preference number: 5 (lower is better)
Translates to: NDNRPIFLQSSYEASVPECVPDC*GHCLPA
Trigger: TGCAGGAAGACAGTGGCCCAAGCAGTCTGGGACACA...CTCAGGGACGCTGGCCTCATAGCTGCTCTGCAGAAAGATGGGCCGGTTGTCATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CAA 90 bp GACAGAAGCGTGGGAGGCTGGCAATGCTCCCCTCCCTGCATCGGGACCAGGAGGACGAGTGCACATCTCTaGACCAGAAGTCTTTCATCA +
Preference number: 5 (lower is better)
Translates to: DRSVGGWQCSPPCIGTRRTSAHL*TRSLSS
Trigger: TGATGAAAGACTTCTGGTCAAGAGATGTGCACTCGT...CCTCCTGGTCCCGATGCAGGGAGGGGAGCATTGCCAGCCTCCCACGCTTCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CAA 90 bp AATGACAACCGGCCCATCTTTCTGCAGAGCAGCTATGAGGCCAGCGTCCCTGAGGAAATGCCCTGCCTCTaGCCACTCTGTCACAGCACC +
Preference number: 5 (lower is better)
Translates to: NDNRPIFLQSSYEASVPEEMPCL*PLCHST
Trigger: GGTGCTGTGACAGAGTGGCAAGAGGCAGGGCATTTC...CTCAGGGACGCTGGCCTCATAGCTGCTCTGCAGAAAGATGGGCCGGTTGTCATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CAA 90 bp CCACAGATAGCATCCCTAGTGTGGGCAGGACTTGGGACCCCACAGCTGTCCTGGGACCCTGAAAACAATTaGGGTGTGCACCCACACCTC +
Preference number: 5 (lower is better)
Translates to: PQIASLVWAGLGTPQLSWDPENN*GVHPHL
Trigger: GAGGTGTGGGTGCACACCCAAATTGTTTTCAGGGTC...CCAGGACAGCTGTGGGGTCCCAAGTCCTGCCCACACTAGGGATGCTATCTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CAA 90 bp CCACAGATAGCATCCCTAGTGTGGGCAGGACTTGGGACCCCACAGCTGTCCTGGAAACAGGAGGAAGACTaGGCCTCCCCCTGCATATCT +
Preference number: 5 (lower is better)
Translates to: PQIASLVWAGLGTPQLSWKQEED*ASPCIS
Trigger: AGATATGCAGGGGGAGGCCAAGTCTTCCTCCTGTTT...CCAGGACAGCTGTGGGGTCCCAAGTCCTGCCCACACTAGGGATGCTATCTGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CAA 90 bp GCAGGCGCAACAGCTCCAAGGCTCAGAGGGAGAGAAGGGAGGACCCTGAAAACAGATGTGGGGGCATGTTaGTGGACACCCCATTACATC +
Preference number: 5 (lower is better)
Translates to: AGATAPRLRGREGRTLKTDVGAC*WTPHYI
Trigger: GATGTAATGGGGTGTCCACAAACATGCCCCCACATC...TGTTTTCAGGGTCCTCCCTTCTCTCCCTCTGAGCCTTGGAGCTGTTGCGCCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CAA 90 bp GACACACCCAGGCTGGGCCACGCTTCACTCTGTACACAGAAGCCTCATACTTCTTGGGGTGGGACTGCTTaGACGGGTCATCAGCAAAGC +
Preference number: 5 (lower is better)
Translates to: DTPRLGHASLCTQKPHTSWGGTA*TGHQQS
Trigger: GCTTTGCTGATGACCCGTCAAAGCAGTCCCACCCCA...AGAAGTATGAGGCTTCTGTGTACAGAGTGAAGCGTGGCCCAGCCTGGGTGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CAA 90 bp GACAGAAGCGTGGGAGGCTGGCAATGCTCCCCTCCCTGCATCGGGACCAGGAGGTCCAATAGAGCCTGCTaGGAGAGAAATCTTTCTAGA +
Preference number: 5 (lower is better)
Translates to: DRSVGGWQCSPPCIGTRRSNRAC*ERNLSR
Trigger: TCTAGAAAGATTTCTCTCCAAGCAGGCTCTATTGGA...CCTCCTGGTCCCGATGCAGGGAGGGGAGCATTGCCAGCCTCCCACGCTTCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CAA 90 bp CCTGAAAACAATTTGGGTGTGCACCCACACCTCTGCCCAGAGGCCTCAGTTGCTGCCGAGGCTCCCCTCTaGGGAAGTAAACAGGCACAA +
Preference number: 5 (lower is better)
Translates to: PENNLGVHPHLCPEASVAAEAPL*GSKQAQ
Trigger: TTGTGCCTGTTTACTTCCCAAGAGGGGAGCCTCGGC...AGCAACTGAGGCCTCTGGGCAGAGGTGTGGGTGCACACCCAAATTGTTTTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CAA 90 bp GAAGGGCCTTTCAGAGTAGCGGGGAGAAAGAGACGTCACAATTTCCCGGAAAGGGGCCCATCCAGGTGTTaGACCCAGGTGCTATACCCG +
Preference number: 5 (lower is better)
Translates to: EGPFRVAGRKRRHNFPERGPSRC*TQVLYP
Trigger: CGGGTATAGCACCTGGGTCAAACACCTGGATGGGCC...CCTTTCCGGGAAATTGTGACGTCTCTTTCTCCCCGCTACTCTGAAAGGCCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CAA 90 bp TGCTATACCCGCCAGTCCCTGACAGCAGTTGGCTTTTTGCTCTTAGTACCTGTATCTCCATGCTGGGCTTaGGCACCTGGAGGGCAAGGC +
Preference number: 5 (lower is better)
Translates to: CYTRQSLTAVGFLLLVPVSPCWA*APGGQG
Trigger: GCCTTGCCCTCCAGGTGCCAAAGCCCAGCATGGAGA...TACAGGTACTAAGAGCAAAAAGCCAACTGCTGTCAGGGACTGGCGGGTATAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CAA 90 bp TCTCTTGACCAGAAGTCTTTCATCAAGCAGCAGCGAGGGGGTCTGCAGAGAGGAGCCGAGGCTCCCCTCTaGGGAAGTAAACAGGCACAA +
Preference number: 5 (lower is better)
Translates to: SLDQKSFIKQQRGGLQRGAEAPL*GSKQAQ
Trigger: TTGTGCCTGTTTACTTCCCAAGAGGGGAGCCTCGGC...TCCTCTCTGCAGACCCCCTCGCTGCTGCTTGATGAAAGACTTCTGGTCAAGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CAA 90 bp ATGACCACGAGTGCACATCTCTTGACCAGAAGTCTTTCATCAAGCAGCAGCGAGGCTTTCACAGAGCCCTaGGCCGAGGCTCCCCTCTTG +
Preference number: 5 (lower is better)
Translates to: MTTSAHLLTRSLSSSSSEAFTEP*AEAPLL
Trigger: CAAGAGGGGAGCCTCGGCCAAGGGCTCTGTGAAAGC...CTCGCTGCTGCTTGATGAAAGACTTCTGGTCAAGAGATGTGCACTCGTGGTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CAA 90 bp AGCAGCGAGGGGGTCTGCAGAGAGGAAGGTGCTCTTCTGAGGATCATCTTTGGGAAACAGGAGGAAGACTaGGCCTCCCCCTGCATATCT +
Preference number: 5 (lower is better)
Translates to: SSEGVCREEGALLRIIFGKQEED*ASPCIS
Trigger: AGATATGCAGGGGGAGGCCAAGTCTTCCTCCTGTTT...CCCAAAGATGATCCTCAGAAGAGCACCTTCCTCTCTGCAGACCCCCTCGCTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CAA 90 bp AGCAGCGAGGGGGTCTGCAGAGAGGAAGGTGCTCTTCTGAGGATCATCTTTGGGAAAGGAAGTCACCCCTaGCAAAGGCTAGGGCAGATG +
Preference number: 5 (lower is better)
Translates to: SSEGVCREEGALLRIIFGKGSHP*QRLGQM
Trigger: CATCTGCCCTAGCCTTTGCAAGGGGTGACTTCCTTT...CCCAAAGATGATCCTCAGAAGAGCACCTTCCTCTCTGCAGACCCCCTCGCTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CAA 90 bp GACACACCCAGGCTGGGCCACGCTTCACTCTGTACACAGAAGCCTCATACTTCTGGGAACCTTTGCCATTaGGCAACTTCTCCATGCTGG +
Preference number: 5 (lower is better)
Translates to: DTPRLGHASLCTQKPHTSGNLCH*ATSPCW
Trigger: CCAGCATGGAGAAGTTGCCAAATGGCAAAGGTTCCC...AGAAGTATGAGGCTTCTGTGTACAGAGTGAAGCGTGGCCCAGCCTGGGTGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CAA 90 bp CTTCATGGGGTTGCTGTGAGGACTGAATGGGTTAGAAGAATGGCTGGCACATGGGAAATGCCCTGCCTCTaGCCACTCTGTCACAGCACC +
Preference number: 5 (lower is better)
Translates to: LHGVAVRTEWVRRMAGTWEMPCL*PLCHST
Trigger: GGTGCTGTGACAGAGTGGCAAGAGGCAGGGCATTTC...CCATGTGCCAGCCATTCTTCTAACCCATTCAGTCCTCACAGCAACCCCATGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CAA 90 bp AATGACAACCGGCCCATCTTTCTGCAGAGCAGCTATGAGGCCAGCGTCCCTGAGGCCCACCCTTCAAATTaGGGACCTGACCAAAGTGTT +
Preference number: 5 (lower is better)
Translates to: NDNRPIFLQSSYEASVPEAHPSN*GPDQSV
Trigger: AACACTTTGGTCAGGTCCCAAATTTGAAGGGTGGGC...CTCAGGGACGCTGGCCTCATAGCTGCTCTGCAGAAAGATGGGCCGGTTGTCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CAA 90 bp CCTGAAAACAATTTGGGTGTGCACCCACACCTCTGCCCAGAGGCCTCAGTTGCTGACCCTGAAAACAATTaGGGTGTGCACCCACACCTC +
Preference number: 5 (lower is better)
Translates to: PENNLGVHPHLCPEASVADPENN*GVHPHL
Trigger: GAGGTGTGGGTGCACACCCAAATTGTTTTCAGGGTC...AGCAACTGAGGCCTCTGGGCAGAGGTGTGGGTGCACACCCAAATTGTTTTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CAA 90 bp TGCTATACCCGCCAGTCCCTGACAGCAGTTGGCTTTTTGCTCTTAGTACCTGTAGGCCCATCCAGGTGTTaGACCCAGGTGCTATACCCG +
Preference number: 5 (lower is better)
Translates to: CYTRQSLTAVGFLLLVPVGPSRC*TQVLYP
Trigger: CGGGTATAGCACCTGGGTCAAACACCTGGATGGGCC...TACAGGTACTAAGAGCAAAAAGCCAACTGCTGTCAGGGACTGGCGGGTATAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CAA 90 bp GCAGGCGCAACAGCTCCAAGGCTCAGAGGGAGAGAAGGGAGGACCCTGAAAACAACGAGTGCACATCTCTaGACCAGAAGTCTTTCATCA +
Preference number: 5 (lower is better)
Translates to: AGATAPRLRGREGRTLKTTSAHL*TRSLSS
Trigger: TGATGAAAGACTTCTGGTCAAGAGATGTGCACTCGT...TGTTTTCAGGGTCCTCCCTTCTCTCCCTCTGAGCCTTGGAGCTGTTGCGCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CAA 90 bp TCTCTTGACCAGAAGTCTTTCATCAAGCAGCAGCGAGGGGGTCTGCAGAGAGGAGCCCACCCTTCAAATTaGGGACCTGACCAAAGTGTT +
Preference number: 5 (lower is better)
Translates to: SLDQKSFIKQQRGGLQRGAHPSN*GPDQSV
Trigger: AACACTTTGGTCAGGTCCCAAATTTGAAGGGTGGGC...TCCTCTCTGCAGACCCCCTCGCTGCTGCTTGATGAAAGACTTCTGGTCAAGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CAA 90 bp AGCAGGCGCAACAGCTCCAAGGCTCAGAGGGAGAGAAGGGAGGACCCTGAAAACACAGCAGTTGGCTTTTaGCTCTTAGTACCTGTATCT +
Preference number: 5 (lower is better)
Translates to: SRRNSSKAQRERREDPENTAVGF*LLVPVS
Trigger: AGATACAGGTACTAAGAGCAAAAAGCCAACTGCTGT...GTTTTCAGGGTCCTCCCTTCTCTCCCTCTGAGCCTTGGAGCTGTTGCGCCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CAA 90 bp GAAGGGCCTTTCAGAGTAGCGGGGAGAAAGAGACGTCACAATTTCCCGGAAAGGCATCATTCAATCCACTaGAGTGCCTCAGTTACCTCC +
Preference number: 5 (lower is better)
Translates to: EGPFRVAGRKRRHNFPERHHSIH*SASVTS
Trigger: GGAGGTAACTGAGGCACTCAAGTGGATTGAATGATG...CCTTTCCGGGAAATTGTGACGTCTCTTTCTCCCCGCTACTCTGAAAGGCCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CAA 90 bp CCTGAAAACAATTTGGGTGTGCACCCACACCTCTGCCCAGAGGCCTCAGTTGCTAGTTTTCCTGGAGTTTaGGATCAAGATGAGGCTAGA +
Preference number: 5 (lower is better)
Translates to: PENNLGVHPHLCPEASVASFPGV*DQDEAR
Trigger: TCTAGCCTCATCTTGATCCAAAACTCCAGGAAAACT...AGCAACTGAGGCCTCTGGGCAGAGGTGTGGGTGCACACCCAAATTGTTTTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CAA 90 bp TGCTATACCCGCCAGTCCCTGACAGCAGTTGGCTTTTTGCTCTTAGTACCTGTACATCATTCAATCCACTaGAGTGCCTCAGTTACCTCC +
Preference number: 5 (lower is better)
Translates to: CYTRQSLTAVGFLLLVPVHHSIH*SASVTS
Trigger: GGAGGTAACTGAGGCACTCAAGTGGATTGAATGATG...TACAGGTACTAAGAGCAAAAAGCCAACTGCTGTCAGGGACTGGCGGGTATAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CAA 90 bp TCTCTTGACCAGAAGTCTTTCATCAAGCAGCAGCGAGGGGGTCTGCAGAGAGGAACAGCAGTTGGCTTTTaGCTCTTAGTACCTGTATCT +
Preference number: 5 (lower is better)
Translates to: SLDQKSFIKQQRGGLQRGTAVGF*LLVPVS
Trigger: AGATACAGGTACTAAGAGCAAAAAGCCAACTGCTGT...TCCTCTCTGCAGACCCCCTCGCTGCTGCTTGATGAAAGACTTCTGGTCAAGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CAA 90 bp GTTAGTGTTATTCCTAAGCTAAAAAGGAAGTCACCCCTTGCAAAGGCTAGGGCAGGGAACCTTTGCCATTaGGCAACTTCTCCATGCTGG +
Preference number: 5 (lower is better)
Translates to: VSVIPKLKRKSPLAKARAGNLCH*ATSPCW
Trigger: CCAGCATGGAGAAGTTGCCAAATGGCAAAGGTTCCC...TGCCCTAGCCTTTGCAAGGGGTGACTTCCTTTTTAGCTTAGGAATAACACTAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CAA 90 bp CCTCTGCCCACCCTTCAAATTTGGGACCTGACCAAAGTGTTTAACCCTCGCGTTAGTTTTCCTGGAGTTTaGGATCAAGATGAGGCTAGA +
Preference number: 5 (lower is better)
Translates to: PLPTLQIWDLTKVFNPRVSFPGV*DQDEAR
Trigger: TCTAGCCTCATCTTGATCCAAAACTCCAGGAAAACT...AACGCGAGGGTTAAACACTTTGGTCAGGTCCCAAATTTGAAGGGTGGGCAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS-3UTR CAA 90 bp CCTCTGCCCACCCTTCAAATTTGGGACCTGACCAAAGTGTTTAACCCTCGCGTTTCCAATAGAGCCTGCTaGGAGAGAAATCTTTCTAGA +
Preference number: 5 (lower is better)
Translates to: PLPTLQIWDLTKVFNPRVSNRAC*ERNLSR
Trigger: TCTAGAAAGATTTCTCTCCAAGCAGGCTCTATTGGA...AACGCGAGGGTTAAACACTTTGGTCAGGTCCCAAATTTGAAGGGTGGGCAGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS CCA 72 bp AGCCCAGGCGCTTCCAGAGCCGGAGCTGGGGCTCACTaGGGCTCCCAGGGTGGTGGGGCATGCACTCGTGAG +
Preference number: 6 (lower is better)
Translates to: SPGASRAGAGAH*GSQGGGACTRE
Trigger: CTCACGAGTGCATGCCCCACCACCCTGGGAGCCCCAGTGAGCCCCAGCTCCGGCTCTGGAAGCGCCTGGGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS CCA 72 bp CCTGTGATTCCAGCCGCAGTGGCCTGTGGCCGTCCGTaGACTGGAGGCCTCACCCGCGGCAGGCCTTCACTC +
Preference number: 6 (lower is better)
Translates to: PVIPAAVACGRP*TGGLTRGRPSL
Trigger: GAGTGAAGGCCTGCCGCGGGTGAGGCCTCCAGTCCACGGACGGCCACAGGCCACTGCGGCTGGAATCACAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398786.2
CDS CCA 72 bp GCTCATGGCTCCTGTGATTCCAGCCGCAGTGGCCTGTaGCCGTCCGTGGACTGGAGGCCTCACCCGCGGCAG +
Preference number: 6 (lower is better)
Translates to: AHGSCDSSRSGL*PSVDWRPHPRQ
Trigger: CTGCCGCGGGTGAGGCCTCCAGTCCACGGACGGCCACAGGCCACTGCGGCTGGAATCACAGGAGCCATGAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398786.2
CDS TCA 72 bp GGCTCGGGTCCAGCGCGGCCGGCTTGCAGAGCGTCATaGACAGCAGACAGGTGGCCAGCAGGAGGAAGATGC +
Preference number: 6 (lower is better)
Translates to: GSGPARPACRAS*TADRWPAGGRC
Trigger: GCATCTTCCTCCTGCTGGCCACCTGTCTGCTGTTCATGACGCTCTGCAAGCCGGCCGCGCTGGACCCGAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398786.2
ENST00000441508.4
CDS CCA 72 bp CTCCTCAGAGCCAGACCCCAGCCGTCCGGAGCTCCGTaGAGAGGTCTTCTCAGCTGTGGAAGGGAGGCCCAA +
Preference number: 6 (lower is better)
Translates to: LLRARPQPSGAP*RGLLSCGREAQ
Trigger: TTGGGCCTCCCTTCCACAGCTGAGAAGACCTCTCCACGGAGCTCCGGACGGCTGGGGTCTGGCTCTGAGGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441508.4