RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BUB3 (Homo sapiens)

Ensembl gene IDs: ENSG00000154473

Ensembl transcript IDs: ENST00000368858.9, ENST00000368865.9, ENST00000407911.2, ENST00000481952.1

Found 234 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTGCCCATCCTGAGTGAAGCTGCACACTTGGCTCAAAGGCCCTGCTaGTCCACCGAGAGGGCACAAGGGGGCATGAGGGAAATGGCTGAA +
Preference number: 1 (lower is better)
Translates to: LPILSEAAHLAQRPC*STERAQGGMREMAE
Trigger: TTCAGCCATTTCCCTCATGCCCCCTTGTGCCCTCTCGGTGGATCAGCAGGGCCTTTGAGCCAAGTGTGCAGCTTCACTCAGGATGGGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR TCA 90 bp CCTATAATCCCAGCTCTTAGGGAGGCAAGAGGCGGGAGGATAGCTTaGGCCCAGGAGTTCGAGACCTGCCTGGGCAGTATAGCGAGACCC +
Preference number: 1 (lower is better)
Translates to: PIIPALREARGGRIA*AQEFETCLGSIARP
Trigger: GGGTCTCGCTATACTGCCCAGGCAGGTCTCGAACTCCTGGGCTCAAGCTATCCTCCCGCCTCTTGCCTCCCTAAGAGCTGGGATTATAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR TCA 90 bp CAAAAGGTCCCCAGAGGCTGCCACATAGTCTCTGCCCATCCTGAGTaGAGCTGCACACTTGGCTCAAAGGCCCTGCTGATCCACCGAGAG +
Preference number: 1 (lower is better)
Translates to: QKVPRGCHIVSAHPE*SCTLGSKALLIHRE
Trigger: CTCTCGGTGGATCAGCAGGGCCTTTGAGCCAAGTGTGCAGCTTCACTCAGGATGGGCAGAGACTATGTGGCAGCCTCTGGGGACCTTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR CCA 90 bp AGAGCACCTTACAGTCCGCGGCCCCTTCCTGATGATCTAGAAGCTTaGGAAGCAGCACACCTCCTTATGAAATCACTGAAGGGTGACTAT +
Preference number: 1 (lower is better)
Translates to: RAPYSPRPLPDDLEA*EAAHLLMKSLKGDY
Trigger: ATAGTCACCCTTCAGTGATTTCATAAGGAGGTGTGCTGCTTCCCAAGCTTCTAGATCATCAGGAAGGGGCCGCGGACTGTAAGGTGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR TCA 90 bp ACTACCAGGGCAGTGGCTGTGAAGACCAAAGGTTGGCCAAGGTCTTaGAAACAAAATGTGGCCACGTTGTGGTATCACAGCATCTGTCAC +
Preference number: 1 (lower is better)
Translates to: TTRAVAVKTKGWPRS*KQNVATLWYHSICH
Trigger: GTGACAGATGCTGTGATACCACAACGTGGCCACATTTTGTTTTCAAGACCTTGGCCAACCTTTGGTCTTCACAGCCACTGCCCTGGTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR GCA 90 bp CTATCACCAGCCACATGGAGCACCTGCCCACATGATACCTGGGGGTaGAAATTTGAAGTTGCCATTTTCCCTCCATGTCATGGAATTCCT +
Preference number: 1 (lower is better)
Translates to: LSPATWSTCPHDTWG*KFEVAIFPPCHGIP
Trigger: AGGAATTCCATGACATGGAGGGAAAATGGCAACTTCAAATTTGCACCCCCAGGTATCATGTGGGCAGGTGCTCCATGTGGCTGGTGATAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR CCA 90 bp TCACAACTATCACCAGCCACATGGAGCACCTGCCCACATGATACCTaGGGGTGCAAATTTGAAGTTGCCATTTTCCCTCCATGTCATGGA +
Preference number: 1 (lower is better)
Translates to: SQLSPATWSTCPHDT*GCKFEVAIFPPCHG
Trigger: TCCATGACATGGAGGGAAAATGGCAACTTCAAATTTGCACCCCCAGGTATCATGTGGGCAGGTGCTCCATGTGGCTGGTGATAGTTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR GCA 90 bp CTGTTATTTGGCTCTGTGTGGACTATGACTACATCAACACGGGGATaGACAAGCTACCTAAGCACTACTGCGCTGGCACTAGTAAAGCAC +
Preference number: 1 (lower is better)
Translates to: LLFGSVWTMTTSTRG*TSYLSTTALALVKH
Trigger: GTGCTTTACTAGTGCCAGCGCAGTAGTGCTTAGGTAGCTTGTGCATCCCCGTGTTGATGTAGTCATAGTCCACACAGAGCCAAATAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR GCA 90 bp GTCACTACTCTATTAGATGGAGGACTTAAGGCAGAAATTGGAGGCTaGCACATTCACCCAAAAGGCCCTGGGATGGTAGCAGTAGGAAGA +
Preference number: 1 (lower is better)
Translates to: VTTLLDGGLKAEIGG*HIHPKGPGMVAVGR
Trigger: TCTTCCTACTGCTACCATCCCAGGGCCTTTTGGGTGAATGTGGCAGCCTCCAATTTCTGCCTTAAGTCCTCCATCTAATAGAGTAGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR TCA 90 bp GATAAACAGAAGAGACACTTAAAGAATGTGGGTGAGGGAAACCAATaGGAAGGCCAAGGTAACTACACCTGGGTAACTTGGGGAAAAGGT +
Preference number: 1 (lower is better)
Translates to: DKQKRHLKNVGEGNQ*EGQGNYTWVTWGKG
Trigger: ACCTTTTCCCCAAGTTACCCAGGTGTAGTTACCTTGGCCTTCTCATTGGTTTCCCTCACCCACATTCTTTAAGTGTCTCTTCTGTTTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR TCA 90 bp ACTACTGCTAAAGGTATACAAGCAGGAGGTGTTTCATACGTGTTTTaGGAAAGGGCACACTTATTTGTGAGCTGCAACAAGGAAGAAGGG +
Preference number: 1 (lower is better)
Translates to: TTAKGIQAGGVSYVF*ERAHLFVSCNKEEG
Trigger: CCCTTCTTCCTTGTTGCAGCTCACAAATAAGTGTGCCCTTTCTCAAAACACGTATGAAACACCTCCTGCTTGTATACCTTTAGCAGTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR CCA 90 bp CCAAGAATGTTAAAAGTAGCTGCCTCCTATGAGATGAGTAAGTTCTaGAGCCCTGACATACAGTGTGGTGGCTATCTTAGTAATAATGAA +
Preference number: 1 (lower is better)
Translates to: PRMLKVAASYEMSKF*SPDIQCGGYLSNNE
Trigger: TTCATTATTACTAAGATAGCCACCACACTGTATGTCAGGGCTCCAGAACTTACTCATCTCATAGGAGGCAGCTACTTTTAACATTCTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR-3UTR TCA 90 bp CACAGGTACGTAAGTGGACACCTGCAGCCTCTCGCTCTGGAACAGCCGATAGGGGAGCACCTGCCCACATaGTACCTGGGGGTGCAAATT +
Preference number: 2 (lower is better)
Translates to: HRYVSGHLQPLALEQPIGEHLPT*YLGVQI
Trigger: AATTTGCACCCCCAGGTATCATGTGGGCAGGTGCTC...CCCTATCGGCTGTTCCAGAGCGAGAGGCTGCAGGTGTCCACTTACGTACCTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR-3UTR TCA 90 bp AGGATGACTTCTAAGTATAGCTATGGGCATCCCCCTCAAAGTGGACACCATGCAGGGCACAAGGGGGCATaGGGGAAATGGCTGAACTCC +
Preference number: 2 (lower is better)
Translates to: RMTSKYSYGHPPQSGHHAGHKGA*GKWLNS
Trigger: GGAGTTCAGCCATTTCCCTCATGCCCCCTTGTGCCC...TGCATGGTGTCCACTTTGAGGGGGATGCCCATAGCTATACTTAGAAGTCATCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR-3UTR CCA 90 bp CACAGGTACGTAAGTGGACACCTGCAGCCTCTCGCTCTGGAACAGCCGATAGGGTCAGCAATATCAAAGTaGTCCAACAGTCATGTGCCA +
Preference number: 2 (lower is better)
Translates to: HRYVSGHLQPLALEQPIGSAISK*SNSHVP
Trigger: TGGCACATGACTGTTGGACCACTTTGATATTGCTGA...CCCTATCGGCTGTTCCAGAGCGAGAGGCTGCAGGTGTCCACTTACGTACCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR-3UTR TCA 90 bp CAGATACATCGCATGCAAGAAGGGCAAGTCATATTTCAGGATCCTTCTGTCATGGCTCAAAGGCCCTGCTaGTCCACCGAGAGGGCACAA +
Preference number: 2 (lower is better)
Translates to: QIHRMQEGQVIFQDPSVMAQRPC*STERAQ
Trigger: TTGTGCCCTCTCGGTGGATCAGCAGGGCCTTTGAGC...CATGACAGAAGGATCCTGAAATATGACTTGCCCTTCTTGCATGCGATGTATCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR CAA 90 bp TTGTATCCAGGCGTCAGATGCTCTAGGGCAGGGGTGTCCAATCTTTaGGCTTTCCTGGTCCACACTGGAAGAATTGTCTTGAGCTACACA +
Preference number: 2 (lower is better)
Translates to: LYPGVRCSRAGVSNL*AFLVHTGRIVLSYT
Trigger: TGTGTAGCTCAAGACAATTCTTCCAGTGTGGACCAGGAAAGCCAAAAGATTGGACACCCCTGCCCTAGAGCATCTGACGCCTGGATACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR-3UTR TCA 90 bp AGGATGACTTCTAAGTATAGCTATGGGCATCCCCCTCAAAGTGGACACCATGCAGTTAGTCCCATCTTCTaGGAGCACCTTACAGTCCGC +
Preference number: 2 (lower is better)
Translates to: RMTSKYSYGHPPQSGHHAVSPIF*EHLTVR
Trigger: GCGGACTGTAAGGTGCTCTCAGAAGATGGGACTAAC...TGCATGGTGTCCACTTTGAGGGGGATGCCCATAGCTATACTTAGAAGTCATCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR-3UTR GCA 90 bp CACAGGTACGTAAGTGGACACCTGCAGCCTCTCGCTCTGGAACAGCCGATAGGGCCCTCCAATTTTGTTTaGCCAAATACCTTTAATGCA +
Preference number: 2 (lower is better)
Translates to: HRYVSGHLQPLALEQPIGPSNFV*PNTFNA
Trigger: TGCATTAAAGGTATTTGGGCAAACAAAATTGGAGGG...CCCTATCGGCTGTTCCAGAGCGAGAGGCTGCAGGTGTCCACTTACGTACCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR-3UTR CCA 90 bp TGTGAAGACCAAAGGTTGGCCAAGGTCTTGAAAACAAAATGTGGCCACGTTGTGTCCCAACTACTCGGGTaGCTGAGGCAGGAGAATTGC +
Preference number: 2 (lower is better)
Translates to: CEDQRLAKVLKTKCGHVVSQLLG*LRQENC
Trigger: GCAATTCTCCTGCCTCAGCCACCCGAGTAGTTGGGA...CACAACGTGGCCACATTTTGTTTTCAAGACCTTGGCCAACCTTTGGTCTTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR CAA 90 bp TACTACCAGGGCAGTGGCTGTGAAGACCAAAGGTTGGCCAAGGTCTaGAAAACAAAATGTGGCCACGTTGTGGTATCACAGCATCTGTCA +
Preference number: 2 (lower is better)
Translates to: YYQGSGCEDQRLAKV*KTKCGHVVVSQHLS
Trigger: TGACAGATGCTGTGATACCACAACGTGGCCACATTTTGTTTTCAAGACCTTGGCCAACCTTTGGTCTTCACAGCCACTGCCCTGGTAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR-3UTR GCA 90 bp ACAAAATGTGGCCACGTTGTGGTATCACAGCATCTGTCACAGTGTTTTGAGCCCGCAGAAATTGGAGGCTaGCACATTCACCCAAAAGGC +
Preference number: 2 (lower is better)
Translates to: TKCGHVVVSQHLSQCFEPAEIGG*HIHPKG
Trigger: GCCTTTTGGGTGAATGTGGCAGCCTCCAATTTCTGC...GGGCTCAAAACACTGTGACAGATGCTGTGATACCACAACGTGGCCACATTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR-3UTR GCA 90 bp TGTGAAGACCAAAGGTTGGCCAAGGTCTTGAAAACAAAATGTGGCCACGTTGTGTCAAAGTGGACACCATaGAGGCTGTGTGGCTTGTGC +
Preference number: 2 (lower is better)
Translates to: CEDQRLAKVLKTKCGHVVSKWTP*RLCGLC
Trigger: GCACAAGCCACACAGCCTGCATGGTGTCCACTTTGA...CACAACGTGGCCACATTTTGTTTTCAAGACCTTGGCCAACCTTTGGTCTTCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR-3UTR CCA 90 bp CACAGGTACGTAAGTGGACACCTGCAGCCTCTCGCTCTGGAACAGCCGATAGGGAATGTATTTCTTACTTaGGTCACAACTACAAGGTTC +
Preference number: 2 (lower is better)
Translates to: HRYVSGHLQPLALEQPIGNVFLT*VTTTRF
Trigger: GAACCTTGTAGTTGTGACCCAAGTAAGAAATACATT...CCCTATCGGCTGTTCCAGAGCGAGAGGCTGCAGGTGTCCACTTACGTACCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR-3UTR CCA 90 bp ACAAAATGTGGCCACGTTGTGGTATCACAGCATCTGTCACAGTGTTTTGAGCCCGGGTGTCCAATCTTTTaGCTTTCCTGGTCCACACTG +
Preference number: 2 (lower is better)
Translates to: TKCGHVVVSQHLSQCFEPGCPIF*LSWSTL
Trigger: CAGTGTGGACCAGGAAAGCCAAAAGATTGGACACCC...GGGCTCAAAACACTGTGACAGATGCTGTGATACCACAACGTGGCCACATTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR-3UTR CCA 90 bp ACAAAATGTGGCCACGTTGTGGTATCACAGCATCTGTCACAGTGTTTTGAGCCCGAACCTAGCAGTGGCTaGCACATCACAGGCACTAAA +
Preference number: 2 (lower is better)
Translates to: TKCGHVVVSQHLSQCFEPEPSSG*HITGTK
Trigger: TTTAGTGCCTGTGATGTGCCAGCCACTGCTAGGTTC...GGGCTCAAAACACTGTGACAGATGCTGTGATACCACAACGTGGCCACATTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR CAA 90 bp ACAATGAAGGGTTTGAATGCTAAGGCTAAACTGGGCATTCTGGCCTaGGTCCTTCTAACAAGGCCTGGATCTCCCACAGAACAAAGGCTA +
Preference number: 2 (lower is better)
Translates to: TMKGLNAKAKLGILA*VLLTRPGSPTEQRL
Trigger: TAGCCTTTGTTCTGTGGGAGATCCAGGCCTTGTTAGAAGGACCAAGGCCAGAATGCCCAGTTTAGCCTTAGCATTCAAACCCTTCATTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR-3UTR TCA 90 bp CAGATACATCGCATGCAAGAAGGGCAAGTCATATTTCAGGATCCTTCTGTCATGGCACTAGTAAAGCACTaGGCCAAAAGGTCCCCAGAG +
Preference number: 2 (lower is better)
Translates to: QIHRMQEGQVIFQDPSVMALVKH*AKRSPE
Trigger: CTCTGGGGACCTTTTGGCTCAGTGCTTTACTAGTGC...CATGACAGAAGGATCCTGAAATATGACTTGCCCTTCTTGCATGCGATGTATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR-3UTR TCA 90 bp AGGATGACTTCTAAGTATAGCTATGGGCATCCCCCTCAAAGTGGACACCATGCAGGGCACACTTATTTGTaGGCTGCAACAAGGAAGAAG +
Preference number: 2 (lower is better)
Translates to: RMTSKYSYGHPPQSGHHAGHTYL*AATRKK
Trigger: CTTCTTCCTTGTTGCAGCTCACAAATAAGTGTGCCC...TGCATGGTGTCCACTTTGAGGGGGATGCCCATAGCTATACTTAGAAGTCATCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR-3UTR GCA 90 bp ACAAAATGTGGCCACGTTGTGGTATCACAGCATCTGTCACAGTGTTTTGAGCCCACATCAACACGGGGATaGACAAGCTACCTAAGCACT +
Preference number: 2 (lower is better)
Translates to: TKCGHVVVSQHLSQCFEPTSTRG*TSYLST
Trigger: AGTGCTTAGGTAGCTTGTGCATCCCCGTGTTGATGT...GGGCTCAAAACACTGTGACAGATGCTGTGATACCACAACGTGGCCACATTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR-3UTR CCA 90 bp TGTGAAGACCAAAGGTTGGCCAAGGTCTTGAAAACAAAATGTGGCCACGTTGTGATGCTAAGGCTAAACTaGGCATTCTGGCCTTGGTCC +
Preference number: 2 (lower is better)
Translates to: CEDQRLAKVLKTKCGHVVMLRLN*AFWPWS
Trigger: GGACCAAGGCCAGAATGCCCAGTTTAGCCTTAGCAT...CACAACGTGGCCACATTTTGTTTTCAAGACCTTGGCCAACCTTTGGTCTTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR-3UTR CCA 90 bp TGTGAAGACCAAAGGTTGGCCAAGGTCTTGAAAACAAAATGTGGCCACGTTGTGATCCTGGGCAGCATGTaGCCCATGGACAACAAATTG +
Preference number: 2 (lower is better)
Translates to: CEDQRLAKVLKTKCGHVVILGSM*PMDNKL
Trigger: CAATTTGTTGTCCATGGGCCACATGCTGCCCAGGAT...CACAACGTGGCCACATTTTGTTTTCAAGACCTTGGCCAACCTTTGGTCTTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR-3UTR TCA 90 bp TTGCTGTCACTTCCCATCCCATCCACTTATTTATATTCCCAACAAAGGTTAGTCAGTCTCTGCCCATCCTaGGTGAAGCTGCACACTTGG +
Preference number: 2 (lower is better)
Translates to: LLSLPIPSTYLYSQQRLVSLCPS*VKLHTW
Trigger: CCAAGTGTGCAGCTTCACTCAGGATGGGCAGAGACT...GACTAACCTTTGTTGGGAATATAAATAAGTGGATGGGATGGGAAGTGACAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR-3UTR GCA 90 bp TTGCTGTCACTTCCCATCCCATCCACTTATTTATATTCCCAACAAAGGTTAGTCAAGGTCCCCAGAGGCTaGCACATAGTCTCTGCCCAT +
Preference number: 2 (lower is better)
Translates to: LLSLPIPSTYLYSQQRLVKVPRG*HIVSAH
Trigger: ATGGGCAGAGACTATGTGGCAGCCTCTGGGGACCTT...GACTAACCTTTGTTGGGAATATAAATAAGTGGATGGGATGGGAAGTGACAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR-3UTR CCA 90 bp AGGATGACTTCTAAGTATAGCTATGGGCATCCCCCTCAAAGTGGACACCATGCACAAGGTAACTACACCTaGGTAACTTGGGGAAAAGGT +
Preference number: 2 (lower is better)
Translates to: RMTSKYSYGHPPQSGHHAQGNYT*VTWGKG
Trigger: ACCTTTTCCCCAAGTTACCCAGGTGTAGTTACCTTG...TGCATGGTGTCCACTTTGAGGGGGATGCCCATAGCTATACTTAGAAGTCATCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR-3UTR CCA 90 bp TGTGAAGACCAAAGGTTGGCCAAGGTCTTGAAAACAAAATGTGGCCACGTTGTGGATGATCTAGAAGCTTaGGAAGCAGCACACCTCCTT +
Preference number: 2 (lower is better)
Translates to: CEDQRLAKVLKTKCGHVVDDLEA*EAAHLL
Trigger: AAGGAGGTGTGCTGCTTCCCAAGCTTCTAGATCATC...CACAACGTGGCCACATTTTGTTTTCAAGACCTTGGCCAACCTTTGGTCTTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR-3UTR CCA 90 bp ACAAAATGTGGCCACGTTGTGGTATCACAGCATCTGTCACAGTGTTTTGAGCCCATTATGTATACTAACTaGCCCTCACTTGCTCAGGCG +
Preference number: 2 (lower is better)
Translates to: TKCGHVVVSQHLSQCFEPIMYTN*PSLAQA
Trigger: CGCCTGAGCAAGTGAGGGCCAGTTAGTATACATAAT...GGGCTCAAAACACTGTGACAGATGCTGTGATACCACAACGTGGCCACATTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR CAA 90 bp GCTTTTCCTAGTGCCCAGATTGTCACAGTGCCTGCATTAGCCACTTaGGTGATCTTAGACTTCAAGCAGTCACCAAACTTAACTAAGTCC +
Preference number: 2 (lower is better)
Translates to: AFPSAQIVTVPALAT*VILDFKQSPNLTKS
Trigger: GGACTTAGTTAAGTTTGGTGACTGCTTGAAGTCTAAGATCACCAAAGTGGCTAATGCAGGCACTGTGACAATCTGGGCACTAGGAAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR-3UTR TCA 90 bp ACAAAATGTGGCCACGTTGTGGTATCACAGCATCTGTCACAGTGTTTTGAGCCCAAATGCCAGGCAATATaGGGAACTACTGCTAAAGGT +
Preference number: 2 (lower is better)
Translates to: TKCGHVVVSQHLSQCFEPKCQAI*GTTAKG
Trigger: ACCTTTAGCAGTAGTTCCTCATATTGCCTGGCATTT...GGGCTCAAAACACTGTGACAGATGCTGTGATACCACAACGTGGCCACATTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR-3UTR GCA 90 bp AGGATGACTTCTAAGTATAGCTATGGGCATCCCCCTCAAAGTGGACACCATGCACACTTATTTGTGAGCTaGAACAAGGAAGAAGGGCTT +
Preference number: 2 (lower is better)
Translates to: RMTSKYSYGHPPQSGHHAHLFVS*NKEEGL
Trigger: AAGCCCTTCTTCCTTGTTGCAGCTCACAAATAAGTG...TGCATGGTGTCCACTTTGAGGGGGATGCCCATAGCTATACTTAGAAGTCATCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR-3UTR GCA 90 bp ACAAAATGTGGCCACGTTGTGGTATCACAGCATCTGTCACAGTGTTTTGAGCCCCATGATACCTGGGGGTaGAAATTTGAAGTTGCCATT +
Preference number: 2 (lower is better)
Translates to: TKCGHVVVSQHLSQCFEPHDTWG*KFEVAI
Trigger: AATGGCAACTTCAAATTTGCACCCCCAGGTATCATG...GGGCTCAAAACACTGTGACAGATGCTGTGATACCACAACGTGGCCACATTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR-3UTR CCA 90 bp TTGCTGTCACTTCCCATCCCATCCACTTATTTATATTCCCAACAAAGGTTAGTCGTGAAGCTGCACACTTaGCTCAAAGGCCCTGCTGAT +
Preference number: 2 (lower is better)
Translates to: LLSLPIPSTYLYSQQRLVVKLHT*LKGPAD
Trigger: ATCAGCAGGGCCTTTGAGCCAAGTGTGCAGCTTCAC...GACTAACCTTTGTTGGGAATATAAATAAGTGGATGGGATGGGAAGTGACAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR-3UTR CCA 90 bp ACTCAGAACCAGATATTGCTGTCACTTCCCATCCCATCCACTTATTTATATTCCTCACCCAAAAGGCCCTaGGATGGTAGCAGTAGGAAG +
Preference number: 2 (lower is better)
Translates to: TQNQILLSLPIPSTYLYSSPKRP*DGSSRK
Trigger: CTTCCTACTGCTACCATCCCAGGGCCTTTTGGGTGA...GGAATATAAATAAGTGGATGGGATGGGAAGTGACAGCAATATCTGGTTCTGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR-3UTR TCA 90 bp TTGCTGTCACTTCCCATCCCATCCACTTATTTATATTCCCAACAAAGGTTAGTCGCTCTGTGTGGACTATaGCTACATCAACACGGGGAT +
Preference number: 2 (lower is better)
Translates to: LLSLPIPSTYLYSQQRLVALCGL*LHQHGD
Trigger: ATCCCCGTGTTGATGTAGTCATAGTCCACACAGAGC...GACTAACCTTTGTTGGGAATATAAATAAGTGGATGGGATGGGAAGTGACAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR-3UTR TCA 90 bp AGGATGACTTCTAAGTATAGCTATGGGCATCCCCCTCAAAGTGGACACCATGCACTGACCTCTGTGTTCTaGACTGTAGTTCAAAATGTA +
Preference number: 2 (lower is better)
Translates to: RMTSKYSYGHPPQSGHHALTSVF*TVVQNV
Trigger: TACATTTTGAACTACAGTTCAGAACACAGAGGTCAG...TGCATGGTGTCCACTTTGAGGGGGATGCCCATAGCTATACTTAGAAGTCATCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR-3UTR GCA 90 bp TGTGAAGACCAAAGGTTGGCCAAGGTCTTGAAAACAAAATGTGGCCACGTTGTGACAGGTCCAAATAGATaGCTGTCTAAATGCACTGCA +
Preference number: 2 (lower is better)
Translates to: CEDQRLAKVLKTKCGHVVTGPNR*LSKCTA
Trigger: TGCAGTGCATTTAGACAGGCATCTATTTGGACCTGT...CACAACGTGGCCACATTTTGTTTTCAAGACCTTGGCCAACCTTTGGTCTTCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR-3UTR CCA 90 bp TTTCCTGGTCCACACTGGAAGAATTGTCTTGAGCTACACATAAAATACACTAATTGTATCCCAGCACTTTaGGAGACCAAGGAGGGCGGA +
Preference number: 2 (lower is better)
Translates to: FPGPHWKNCLELHIKYTNCIPAL*ETKEGG
Trigger: TCCGCCCTCCTTGGTCTCCCAAAGTGCTGGGATACA...ATTAGTGTATTTTATGTGTAGCTCAAGACAATTCTTCCAGTGTGGACCAGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR-3UTR TCA 90 bp TGTGAAGACCAAAGGTTGGCCAAGGTCTTGAAAACAAAATGTGGCCACGTTGTGCATCAAGGTCAAAACTaGTTCTCAAAACTGCAGTCA +
Preference number: 2 (lower is better)
Translates to: CEDQRLAKVLKTKCGHVVHQGQN*FSKLQS
Trigger: TGACTGCAGTTTTGAGAATCAGTTTTGACCTTGATG...CACAACGTGGCCACATTTTGTTTTCAAGACCTTGGCCAACCTTTGGTCTTCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR-3UTR TCA 90 bp GATACATCGCATGCAAGAAGGGCAAGTCATATTTCAGGATCCTTCTGTCATGTACAGCGGCTGGTCAACTaGAATGGACATAAGAACTAT +
Preference number: 2 (lower is better)
Translates to: DTSHARRASHISGSFCHVQRLVN*NGHKNY
Trigger: ATAGTTCTTATGTCCATTTCAGTTGACCAGCCGCTG...TACATGACAGAAGGATCCTGAAATATGACTTGCCCTTCTTGCATGCGATGTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR-3UTR TCA 90 bp ACTCAGAACCAGATATTGCTGTCACTTCCCATCCCATCCACTTATTTATATTCCACCACTTTCACAGGATaGTTAGGTGGACCTGCAATG +
Preference number: 2 (lower is better)
Translates to: TQNQILLSLPIPSTYLYSTTFTG*LGGPAM
Trigger: CATTGCAGGTCCACCTAATCATCCTGTGAAAGTGGT...GGAATATAAATAAGTGGATGGGATGGGAAGTGACAGCAATATCTGGTTCTGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR-3UTR TCA 90 bp ACTCAGAACCAGATATTGCTGTCACTTCCCATCCCATCCACTTATTTATATTCCCACTTTATGCAGGACTaGATCCCCAACACACATCAG +
Preference number: 2 (lower is better)
Translates to: TQNQILLSLPIPSTYLYSHFMQD*IPNTHQ
Trigger: CTGATGTGTGTTGGGGATTCAGTCCTGCATAAAGTG...GGAATATAAATAAGTGGATGGGATGGGAAGTGACAGCAATATCTGGTTCTGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR-3UTR GCA 90 bp TGTGAAGACCAAAGGTTGGCCAAGGTCTTGAAAACAAAATGTGGCCACGTTGTGCTGACTCAAACAATTTaGCCTTCTGGGATCAATTGT +
Preference number: 2 (lower is better)
Translates to: CEDQRLAKVLKTKCGHVVLTQTI*PSGINC
Trigger: ACAATTGATCCCAGAAGGGCAAATTGTTTGAGTCAG...CACAACGTGGCCACATTTTGTTTTCAAGACCTTGGCCAACCTTTGGTCTTCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR-3UTR GCA 90 bp AGGATGACTTCTAAGTATAGCTATGGGCATCCCCCTCAAAGTGGACACCATGCAAGATGCCTGTCTAAATaGACTGCAATTACGTTACAA +
Preference number: 2 (lower is better)
Translates to: RMTSKYSYGHPPQSGHHARCLSK*TAITLQ
Trigger: TTGTAACGTAATTGCAGTGCATTTAGACAGGCATCT...TGCATGGTGTCCACTTTGAGGGGGATGCCCATAGCTATACTTAGAAGTCATCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR-3UTR GCA 90 bp ACAAAATGTGGCCACGTTGTGGTATCACAGCATCTGTCACAGTGTTTTGAGCCCTGTGATGACGAGTTTTaGCTTACACAAGCCTTTTTA +
Preference number: 2 (lower is better)
Translates to: TKCGHVVVSQHLSQCFEPCDDEF*LTQAFL
Trigger: TAAAAAGGCTTGTGTAAGGCAAAACTCGTCATCACA...GGGCTCAAAACACTGTGACAGATGCTGTGATACCACAACGTGGCCACATTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR-3UTR CCA 90 bp GATACATCGCATGCAAGAAGGGCAAGTCATATTTCAGGATCCTTCTGTCATGTACTGTCCTCAACCAAGTaGTTAGGGACTTTTAGAAGC +
Preference number: 2 (lower is better)
Translates to: DTSHARRASHISGSFCHVLSSTK*LGTFRS
Trigger: GCTTCTAAAAGTCCCTAACCACTTGGTTGAGGACAG...TACATGACAGAAGGATCCTGAAATATGACTTGCCCTTCTTGCATGCGATGTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR-3UTR TCA 90 bp ACTCAGAACCAGATATTGCTGTCACTTCCCATCCCATCCACTTATTTATATTCCAGATTAACCTCCTCATaGAGCAGTCTGAAGCAGCTT +
Preference number: 2 (lower is better)
Translates to: TQNQILLSLPIPSTYLYSRLTSS*SSLKQL
Trigger: AAGCTGCTTCAGACTGCTTCATGAGGAGGTTAATCT...GGAATATAAATAAGTGGATGGGATGGGAAGTGACAGCAATATCTGGTTCTGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR-3UTR CCA 90 bp GATACATCGCATGCAAGAAGGGCAAGTCATATTTCAGGATCCTTCTGTCATGTAAGCAAAAGAAACAAATaGCTCACGAGCCTTTTCCTC +
Preference number: 2 (lower is better)
Translates to: DTSHARRASHISGSFCHVSKRNK*LTSLFL
Trigger: GAGGAAAAGGCTCGTGAGCCATTTGTTTCTTTTGCT...TACATGACAGAAGGATCCTGAAATATGACTTGCCCTTCTTGCATGCGATGTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR-3UTR CCA 90 bp ACTCAGAACCAGATATTGCTGTCACTTCCCATCCCATCCACTTATTTATATTCCAGCAACAGGAAGCAGTaGAGGATTCCAAGTATGACA +
Preference number: 2 (lower is better)
Translates to: TQNQILLSLPIPSTYLYSSNRKQ*RIPSMT
Trigger: TGTCATACTTGGAATCCTCCACTGCTTCCTGTTGCT...GGAATATAAATAAGTGGATGGGATGGGAAGTGACAGCAATATCTGGTTCTGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR-3UTR GCA 90 bp CAGATACATCGCATGCAAGAAGGGCAAGTCATATTTCAGGATCCTTCTGTCATGAACATTCAAGGGTTCTaGATCTCGTTTATTAGCACA +
Preference number: 2 (lower is better)
Translates to: QIHRMQEGQVIFQDPSVMNIQGF*ISFIST
Trigger: TGTGCTAATAAACGAGATGCAGAACCCTTGAATGTT...CATGACAGAAGGATCCTGAAATATGACTTGCCCTTCTTGCATGCGATGTATCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR-3UTR CCA 90 bp TGTGAAGACCAAAGGTTGGCCAAGGTCTTGAAAACAAAATGTGGCCACGTTGTGAACAATTTGCCCTTCTaGGATCAATTGTTTGCTAAT +
Preference number: 2 (lower is better)
Translates to: CEDQRLAKVLKTKCGHVVNNLPF*DQLFAN
Trigger: ATTAGCAAACAATTGATCCCAGAAGGGCAAATTGTT...CACAACGTGGCCACATTTTGTTTTCAAGACCTTGGCCAACCTTTGGTCTTCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR-3UTR CCA 90 bp ACTCAGAACCAGATATTGCTGTCACTTCCCATCCCATCCACTTATTTATATTCCTTAATCACCAGCGGCTaGTCAACTGAAATGGACATA +
Preference number: 2 (lower is better)
Translates to: TQNQILLSLPIPSTYLYSLITSG*STEMDI
Trigger: TATGTCCATTTCAGTTGACCAGCCGCTGGTGATTAA...GGAATATAAATAAGTGGATGGGATGGGAAGTGACAGCAATATCTGGTTCTGAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR-3UTR CCA 90 bp TGTGAAGACCAAAGGTTGGCCAAGGTCTTGAAAACAAAATGTGGCCACGTTGTGAATACCATCAGTCCCTaGCTATTACATTATTTACCT +
Preference number: 2 (lower is better)
Translates to: CEDQRLAKVLKTKCGHVVNTISP*LLHYLP
Trigger: AGGTAAATAATGTAATAGCCAGGGACTGATGGTATT...CACAACGTGGCCACATTTTGTTTTCAAGACCTTGGCCAACCTTTGGTCTTCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR-3UTR CCA 90 bp ACTCAGAACCAGATATTGCTGTCACTTCCCATCCCATCCACTTATTTATATTCCAAGAGGACATCCAGATaGAACCACAAAATAAGCCCT +
Preference number: 2 (lower is better)
Translates to: TQNQILLSLPIPSTYLYSKRTSR*NHKISP
Trigger: AGGGCTTATTTTGTGGTTCCATCTGGATGTCCTCTT...GGAATATAAATAAGTGGATGGGATGGGAAGTGACAGCAATATCTGGTTCTGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR CAA 90 bp AGGTCAAAACTGATTCTCAAAACTGCAGTCACTTGCCCTCCAATTTaGTTTGCCCAAATACCTTTAATGCAGCAAACCATCAAACCATCT +
Preference number: 2 (lower is better)
Translates to: RSKLILKTAVTCPPI*FAQIPLMQQTIKPS
Trigger: AGATGGTTTGATGGTTTGCTGCATTAAAGGTATTTGGGCAAACAAAATTGGAGGGCAAGTGACTGCAGTTTTGAGAATCAGTTTTGACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR-3UTR CCA 90 bp TTGCTGTCACTTCCCATCCCATCCACTTATTTATATTCCCAACAAAGGTTAGTCCACAGGATGATTAGGTaGACCTGCAATGAAGAAAAT +
Preference number: 2 (lower is better)
Translates to: LLSLPIPSTYLYSQQRLVHRMIR*TCNEEN
Trigger: ATTTTCTTCATTGCAGGTCCACCTAATCATCCTGTG...GACTAACCTTTGTTGGGAATATAAATAAGTGGATGGGATGGGAAGTGACAGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR-3UTR TCA 90 bp TTTCCTGGTCCACACTGGAAGAATTGTCTTGAGCTACACATAAAATACACTAATCATGAGGGAAATGGCTaGACTCCAACAAATCACTTT +
Preference number: 2 (lower is better)
Translates to: FPGPHWKNCLELHIKYTNHEGNG*TPTNHF
Trigger: AAAGTGATTTGTTGGAGTTCAGCCATTTCCCTCATG...ATTAGTGTATTTTATGTGTAGCTCAAGACAATTCTTCCAGTGTGGACCAGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR-3UTR TCA 90 bp ACTCAGAACCAGATATTGCTGTCACTTCCCATCCCATCCACTTATTTATATTCCTCATGTATAATATACTaGCCTCTGTGTTCTGAACTG +
Preference number: 2 (lower is better)
Translates to: TQNQILLSLPIPSTYLYSSCIIY*PLCSEL
Trigger: CAGTTCAGAACACAGAGGTCAGTATATTATACATGA...GGAATATAAATAAGTGGATGGGATGGGAAGTGACAGCAATATCTGGTTCTGAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR-3UTR GCA 90 bp TTTCCTGGTCCACACTGGAAGAATTGTCTTGAGCTACACATAAAATACACTAATAAAACTGCAGTCACTTaGCCTCCAATTTTGTTTGCC +
Preference number: 2 (lower is better)
Translates to: FPGPHWKNCLELHIKYTNKTAVT*PPILFA
Trigger: GGCAAACAAAATTGGAGGGCAAGTGACTGCAGTTTT...ATTAGTGTATTTTATGTGTAGCTCAAGACAATTCTTCCAGTGTGGACCAGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR-3UTR GCA 90 bp TTTCCTGGTCCACACTGGAAGAATTGTCTTGAGCTACACATAAAATACACTAATCAACAAATCACTTTATaGAGGACTGAATCCCCAACA +
Preference number: 2 (lower is better)
Translates to: FPGPHWKNCLELHIKYTNQQITL*RTESPT
Trigger: TGTTGGGGATTCAGTCCTGCATAAAGTGATTTGTTG...ATTAGTGTATTTTATGTGTAGCTCAAGACAATTCTTCCAGTGTGGACCAGGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR-3UTR CCA 90 bp ACTCAGAACCAGATATTGCTGTCACTTCCCATCCCATCCACTTATTTATATTCCAATGTTTTAAACTTATaGTCTGTCCTCAACCAAGTG +
Preference number: 2 (lower is better)
Translates to: TQNQILLSLPIPSTYLYSNVLNL*SVLNQV
Trigger: CACTTGGTTGAGGACAGACCATAAGTTTAAAACATT...GGAATATAAATAAGTGGATGGGATGGGAAGTGACAGCAATATCTGGTTCTGAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR-3UTR CCA 90 bp TTTCCTGGTCCACACTGGAAGAATTGTCTTGAGCTACACATAAAATACACTAATTTTATGAATTTGTTTTaGGCCACCTTCAAAGCCATC +
Preference number: 2 (lower is better)
Translates to: FPGPHWKNCLELHIKYTNFMNLF*ATFKAI
Trigger: GATGGCTTTGAAGGTGGCCCAAAACAAATTCATAAA...ATTAGTGTATTTTATGTGTAGCTCAAGACAATTCTTCCAGTGTGGACCAGGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR-3UTR CCA 90 bp TTTCCTGGTCCACACTGGAAGAATTGTCTTGAGCTACACATAAAATACACTAATATACATTTCAAAAGATaGGTTCAGACTTACACCAAG +
Preference number: 2 (lower is better)
Translates to: FPGPHWKNCLELHIKYTNIHFKR*VQTYTK
Trigger: CTTGGTGTAAGTCTGAACCCATCTTTTGAAATGTAT...ATTAGTGTATTTTATGTGTAGCTCAAGACAATTCTTCCAGTGTGGACCAGGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR TCA 72 bp CTGAGTGAAGCTGCACACTTGGCTCAAAGGCCCTGCTaGTCCACCGAGAGGGCACAAGGGGGCATGAGGGAA +
Preference number: 3 (lower is better)
Translates to: LSEAAHLAQRPC*STERAQGGMRE
Trigger: TTCCCTCATGCCCCCTTGTGCCCTCTCGGTGGATCAGCAGGGCCTTTGAGCCAAGTGTGCAGCTTCACTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR GCA 72 bp AGGCAGGAGAATTGCTTGAACCCGAGAGGCGGAGCTTaGAATGAGCGGAGATCGCGCCACTTGCACTCCAGC +
Preference number: 3 (lower is better)
Translates to: RQENCLNPRGGA*NERRSRHLHSS
Trigger: GCTGGAGTGCAAGTGGCGCGATCTCCGCTCATTGCAAGCTCCGCCTCTCGGGTTCAAGCAATTCTCCTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR TCA 72 bp GGCCCTGCTGATCCACCGAGAGGGCACAAGGGGGCATaGGGGAAATGGCTGAACTCCAACAAATCACTTTAT +
Preference number: 3 (lower is better)
Translates to: GPADPPRGHKGA*GKWLNSNKSLY
Trigger: ATAAAGTGATTTGTTGGAGTTCAGCCATTTCCCTCATGCCCCCTTGTGCCCTCTCGGTGGATCAGCAGGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR GCA 72 bp GGCTCTGTGTGGACTATGACTACATCAACACGGGGATaGACAAGCTACCTAAGCACTACTGCGCTGGCACTA +
Preference number: 3 (lower is better)
Translates to: GSVWTMTTSTRG*TSYLSTTALAL
Trigger: TAGTGCCAGCGCAGTAGTGCTTAGGTAGCTTGTGCATCCCCGTGTTGATGTAGTCATAGTCCACACAGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR CCA 72 bp TCACCAGCCACATGGAGCACCTGCCCACATGATACCTaGGGGTGCAAATTTGAAGTTGCCATTTTCCCTCCA +
Preference number: 3 (lower is better)
Translates to: SPATWSTCPHDT*GCKFEVAIFPP
Trigger: TGGAGGGAAAATGGCAACTTCAAATTTGCACCCCCAGGTATCATGTGGGCAGGTGCTCCATGTGGCTGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR GCA 72 bp GCCACATGGAGCACCTGCCCACATGATACCTGGGGGTaGAAATTTGAAGTTGCCATTTTCCCTCCATGTCAT +
Preference number: 3 (lower is better)
Translates to: ATWSTCPHDTWG*KFEVAIFPPCH
Trigger: ATGACATGGAGGGAAAATGGCAACTTCAAATTTGCACCCCCAGGTATCATGTGGGCAGGTGCTCCATGTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR CCA 72 bp TTTTGGGCCACCTTCAAAGCCATCCTGGGCAGCATGTaGCCCATGGACAACAAATTGGACAAGCTTGCTCTA +
Preference number: 3 (lower is better)
Translates to: FWATFKAILGSM*PMDNKLDKLAL
Trigger: TAGAGCAAGCTTGTCCAATTTGTTGTCCATGGGCCACATGCTGCCCAGGATGGCTTTGAAGGTGGCCCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR-3UTR CAA 90 bp CACAGGTACGTAAGTGGACACCTGCAGCCTCTCGCTCTGGAACAGCCGATAGGGTGTTTCATACGTGTTTaGAGAAAGGGCACACTTATT +
Preference number: 3 (lower is better)
Translates to: HRYVSGHLQPLALEQPIGCFIRV*RKGTLI
Trigger: AATAAGTGTGCCCTTTCTCAAAACACGTATGAAACA...CCCTATCGGCTGTTCCAGAGCGAGAGGCTGCAGGTGTCCACTTACGTACCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR GCA 72 bp CTATTAGATGGAGGACTTAAGGCAGAAATTGGAGGCTaGCACATTCACCCAAAAGGCCCTGGGATGGTAGCA +
Preference number: 3 (lower is better)
Translates to: LLDGGLKAEIGG*HIHPKGPGMVA
Trigger: TGCTACCATCCCAGGGCCTTTTGGGTGAATGTGGCAGCCTCCAATTTCTGCCTTAAGTCCTCCATCTAATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR CCA 72 bp GCAGTAAAGTCAGGATTCAGCGCCAGGTTCAAAGGCTaGACTCTAAGATTCACGCTGTCAAATCACACTGCC +
Preference number: 3 (lower is better)
Translates to: AVKSGFSARFKG*TLRFTLSNHTA
Trigger: GGCAGTGTGATTTGACAGCGTGAATCTTAGAGTCCAGCCTTTGAACCTGGCGCTGAATCCTGACTTTACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR-3UTR CAA 90 bp ACAAAATGTGGCCACGTTGTGGTATCACAGCATCTGTCACAGTGTTTTGAGCCCCCTGGGGGTGCAAATTaGAAGTTGCCATTTTCCCTC +
Preference number: 3 (lower is better)
Translates to: TKCGHVVVSQHLSQCFEPPGGAN*KLPFSL
Trigger: GAGGGAAAATGGCAACTTCAAATTTGCACCCCCAGG...GGGCTCAAAACACTGTGACAGATGCTGTGATACCACAACGTGGCCACATTTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR-3UTR CAA 90 bp ACAAAATGTGGCCACGTTGTGGTATCACAGCATCTGTCACAGTGTTTTGAGCCCCAAAACTGCAGTCACTaGCCCTCCAATTTTGTTTGC +
Preference number: 3 (lower is better)
Translates to: TKCGHVVVSQHLSQCFEPQNCSH*PSNFVC
Trigger: GCAAACAAAATTGGAGGGCAAGTGACTGCAGTTTTG...GGGCTCAAAACACTGTGACAGATGCTGTGATACCACAACGTGGCCACATTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR-3UTR CAA 90 bp TTGCTGTCACTTCCCATCCCATCCACTTATTTATATTCCCAACAAAGGTTAGTCGGCAGGGAGGCACACTaGATTTCCAGAGACAAGAGG +
Preference number: 3 (lower is better)
Translates to: LLSLPIPSTYLYSQQRLVGREAH*ISRDKR
Trigger: CCTCTTGTCTCTGGAAATCAAGTGTGCCTCCCTGCC...GACTAACCTTTGTTGGGAATATAAATAAGTGGATGGGATGGGAAGTGACAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR-3UTR CAA 90 bp TTTCCTGGTCCACACTGGAAGAATTGTCTTGAGCTACACATAAAATACACTAATCTGTATCCCAGCACTTaGGGAGACCAAGGAGGGCGG +
Preference number: 3 (lower is better)
Translates to: FPGPHWKNCLELHIKYTNLYPST*GDQGGR
Trigger: CCGCCCTCCTTGGTCTCCCAAAGTGCTGGGATACAG...ATTAGTGTATTTTATGTGTAGCTCAAGACAATTCTTCCAGTGTGGACCAGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR TCA 72 bp TTATTTATATTCCCAACAAAGGTTAGTCCCATCTTCTaGGAGCACCTTACAGTCCGCGGCCCCTTCCTGATG +
Preference number: 3 (lower is better)
Translates to: LFIFPTKVSPIF*EHLTVRGPFLM
Trigger: CATCAGGAAGGGGCCGCGGACTGTAAGGTGCTCTCAGAAGATGGGACTAACCTTTGTTGGGAATATAAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR CCA 72 bp AGACCAAAGGTTGGCCAAGGTCTTGAAAACAAAATGTaGCCACGTTGTGGTATCACAGCATCTGTCACAGTG +
Preference number: 3 (lower is better)
Translates to: RPKVGQGLENKM*PRCGITASVTV
Trigger: CACTGTGACAGATGCTGTGATACCACAACGTGGCCACATTTTGTTTTCAAGACCTTGGCCAACCTTTGGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR-3UTR CAA 90 bp ACAAAATGTGGCCACGTTGTGGTATCACAGCATCTGTCACAGTGTTTTGAGCCCAACCTTAACCTCGCTTaGTTTAACAGCCCAGGAAAT +
Preference number: 3 (lower is better)
Translates to: TKCGHVVVSQHLSQCFEPNLNLA*FNSPGN
Trigger: ATTTCCTGGGCTGTTAAACAAAGCGAGGTTAAGGTT...GGGCTCAAAACACTGTGACAGATGCTGTGATACCACAACGTGGCCACATTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR TCA 72 bp CATGGACAACAAATTGGACAAGCTTGCTCTAGAGGATaGCTTCTAAGTATAGCTATGGGCATCCCCCTCAAA +
Preference number: 3 (lower is better)
Translates to: HGQQIGQACSRG*LLSIAMGIPLK
Trigger: TTTGAGGGGGATGCCCATAGCTATACTTAGAAGTCATCCTCTAGAGCAAGCTTGTCCAATTTGTTGTCCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR TCA 72 bp TGGACTCTAAGATTCACGCTGTCAAATCACACTGCCTaGCCTGTTAAACCAGCAGATTCAATTCTGGATGAG +
Preference number: 3 (lower is better)
Translates to: WTLRFTLSNHTA*PVKPADSILDE
Trigger: CTCATCCAGAATTGAATCTGCTGGTTTAACAGGTCAGGCAGTGTGATTTGACAGCGTGAATCTTAGAGTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR CCA 72 bp TTAAAAGTAGCTGCCTCCTATGAGATGAGTAAGTTCTaGAGCCCTGACATACAGTGTGGTGGCTATCTTAGT +
Preference number: 3 (lower is better)
Translates to: LKVAASYEMSKF*SPDIQCGGYLS
Trigger: ACTAAGATAGCCACCACACTGTATGTCAGGGCTCCAGAACTTACTCATCTCATAGGAGGCAGCTACTTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR-3UTR CAA 90 bp ACAAAATGTGGCCACGTTGTGGTATCACAGCATCTGTCACAGTGTTTTGAGCCCGTAATAAATCCACCATaGGGGAGTACGAATTGTTTT +
Preference number: 3 (lower is better)
Translates to: TKCGHVVVSQHLSQCFEPVINPP*GSTNCF
Trigger: AAAACAATTCGTACTCCCCAATGGTGGATTTATTAC...GGGCTCAAAACACTGTGACAGATGCTGTGATACCACAACGTGGCCACATTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR-3UTR CAA 90 bp GATACATCGCATGCAAGAAGGGCAAGTCATATTTCAGGATCCTTCTGTCATGTAACTGACTCAAACAATTaGCCCTTCTGGGATCAATTG +
Preference number: 3 (lower is better)
Translates to: DTSHARRASHISGSFCHVTDSNN*PFWDQL
Trigger: CAATTGATCCCAGAAGGGCAAATTGTTTGAGTCAGT...TACATGACAGAAGGATCCTGAAATATGACTTGCCCTTCTTGCATGCGATGTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR-3UTR CAA 90 bp TTTCCTGGTCCACACTGGAAGAATTGTCTTGAGCTACACATAAAATACACTAATGACTTAAGGCAGAAATaGGAGGCTGCCACATTCACC +
Preference number: 3 (lower is better)
Translates to: FPGPHWKNCLELHIKYTNDLRQK*EAATFT
Trigger: GGTGAATGTGGCAGCCTCCAATTTCTGCCTTAAGTC...ATTAGTGTATTTTATGTGTAGCTCAAGACAATTCTTCCAGTGTGGACCAGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR TCA 72 bp TTTCATACGTGTTTTGAGAAAGGGCACACTTATTTGTaGGCTGCAACAAGGAAGAAGGGCTTCATGGAAAAG +
Preference number: 3 (lower is better)
Translates to: FHTCFEKGHTYL*AATRKKGFMEK
Trigger: CTTTTCCATGAAGCCCTTCTTCCTTGTTGCAGCTCACAAATAAGTGTGCCCTTTCTCAAAACACGTATGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR TCA 72 bp AAAGGTATACAAGCAGGAGGTGTTTCATACGTGTTTTaGGAAAGGGCACACTTATTTGTGAGCTGCAACAAG +
Preference number: 3 (lower is better)
Translates to: KGIQAGGVSYVF*ERAHLFVSCNK
Trigger: CTTGTTGCAGCTCACAAATAAGTGTGCCCTTTCTCAAAACACGTATGAAACACCTCCTGCTTGTATACCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR CCA 72 bp TATGATCCAAATTTTGTAAAAATTATGTATACTAACTaGCCCTCACTTGCTCAGGCGCATCTTAGCCACAGG +
Preference number: 3 (lower is better)
Translates to: YDPNFVKIMYTN*PSLAQAHLSHR
Trigger: CCTGTGGCTAAGATGCGCCTGAGCAAGTGAGGGCCAGTTAGTATACATAATTTTTACAAAATTTGGATCATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR CCA 72 bp AGGAAGCTAGTGTTATTAGGGTATAGAAGATACCTTTaGCAAAGCAGGAGTTTAACAGATAATGGAGGAAAA +
Preference number: 3 (lower is better)
Translates to: RKLVLLGYRRYL*QSRSLTDNGGK
Trigger: TTTTCCTCCATTATCTGTTAAACTCCTGCTTTGCCAAAGGTATCTTCTATACCCTAATAACACTAGCTTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR CCA 72 bp TTGCTGTTAGAGAAATATACAGAAAATCCTGAAGGATaGATATACACCAAGAATGTTAAAAGTAGCTGCCTC +
Preference number: 3 (lower is better)
Translates to: LLLEKYTENPEG*IYTKNVKSSCL
Trigger: GAGGCAGCTACTTTTAACATTCTTGGTGTATATCCATCCTTCAGGATTTTCTGTATATTTCTCTAACAGCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR GCA 72 bp TTAAGTTTTTACACAACAGAACTCAGAACCAGATATTaGTGTCACTTCCCATCCCATCCACTTATTTATATT +
Preference number: 3 (lower is better)
Translates to: LSFYTTELRTRY*CHFPSHPLIYI
Trigger: AATATAAATAAGTGGATGGGATGGGAAGTGACAGCAATATCTGGTTCTGAGTTCTGTTGTGTAAAAACTTAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR TCA 90 bp CACAGGTACGTAAGTGGACACCTGCAGCCTCTCGCTCTGGAACAGCCGATAGGGCGGTGTGCTGGTACTTaGGCCGCATGGAGTTGGCCG +
Preference number: 4 (lower is better)
Translates to: HRYVSGHLQPLALEQPIGRCAGT*AAWSWP
Trigger: CGGCCAACTCCATGCGGCTCAAGTACCAGCACACCG...CCCTATCGGCTGTTCCAGAGCGAGAGGCTGCAGGTGTCCACTTACGTACCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR GCA 90 bp CACAGGTACGTAAGTGGACACCTGCAGCCTCTCGCTCTGGAACAGCCGATAGGGGGAGATCGCGCCACTTaGACTCCAGCCTGGGCGACA +
Preference number: 4 (lower is better)
Translates to: HRYVSGHLQPLALEQPIGGDRAT*TPAWAT
Trigger: TGTCGCCCAGGCTGGAGTGCAAGTGGCGCGATCTCC...CCCTATCGGCTGTTCCAGAGCGAGAGGCTGCAGGTGTCCACTTACGTACCTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR GCA 90 bp AGGATGACTTCTAAGTATAGCTATGGGCATCCCCCTCAAAGTGGACACCATGCACTACTCGCCACTCGCTaGGGCCGCCGCCGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: RMTSKYSYGHPPQSGHHALLATR*GRRRLL
Trigger: AAGGAGGCGGCGGCGGCCGCAGCGAGTGGCGAGTAG...TGCATGGTGTCCACTTTGAGGGGGATGCCCATAGCTATACTTAGAAGTCATCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR GCA 90 bp CACAGGTACGTAAGTGGACACCTGCAGCCTCTCGCTCTGGAACAGCCGATAGGGTCACCTAGGCTGGAGTaGAGTGGTGCAACTTCAGCT +
Preference number: 4 (lower is better)
Translates to: HRYVSGHLQPLALEQPIGSPRLE*SGATSA
Trigger: AGCTGAAGTTGCACCACTGCACTCCAGCCTAGGTGA...CCCTATCGGCTGTTCCAGAGCGAGAGGCTGCAGGTGTCCACTTACGTACCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR GCA 90 bp AGGATGACTTCTAAGTATAGCTATGGGCATCCCCCTCAAAGTGGACACCATGCAAGGACGGCGCCGGTGTaGTGGTACTTGAGCCGCATG +
Preference number: 4 (lower is better)
Translates to: RMTSKYSYGHPPQSGHHARTAPV*WYLSRM
Trigger: CATGCGGCTCAAGTACCAGCACACCGGCGCCGTCCT...TGCATGGTGTCCACTTTGAGGGGGATGCCCATAGCTATACTTAGAAGTCATCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR CCA 90 bp CACAGGTACGTAAGTGGACACCTGCAGCCTCTCGCTCTGGAACAGCCGATAGGGGATGATCTAGAAGCTTaGGAAGCAGCACACCTCCTT +
Preference number: 4 (lower is better)
Translates to: HRYVSGHLQPLALEQPIGDDLEA*EAAHLL
Trigger: AAGGAGGTGTGCTGCTTCCCAAGCTTCTAGATCATC...CCCTATCGGCTGTTCCAGAGCGAGAGGCTGCAGGTGTCCACTTACGTACCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR GCA 90 bp CACAGGTACGTAAGTGGACACCTGCAGCCTCTCGCTCTGGAACAGCCGATAGGGGTCCAAATACTCAACTaGCACTCGGCCTTCAATAGA +
Preference number: 4 (lower is better)
Translates to: HRYVSGHLQPLALEQPIGVQILN*HSAFNR
Trigger: TCTATTGAAGGCCGAGTGGCAGTTGAGTATTTGGAC...CCCTATCGGCTGTTCCAGAGCGAGAGGCTGCAGGTGTCCACTTACGTACCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR CAA 72 bp GGCGTCAGATGCTCTAGGGCAGGGGTGTCCAATCTTTaGGCTTTCCTGGTCCACACTGGAAGAATTGTCTTG +
Preference number: 4 (lower is better)
Translates to: GVRCSRAGVSNL*AFLVHTGRIVL
Trigger: CAAGACAATTCTTCCAGTGTGGACCAGGAAAGCCAAAAGATTGGACACCCCTGCCCTAGAGCATCTGACGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR TCA 90 bp AGGATGACTTCTAAGTATAGCTATGGGCATCCCCCTCAAAGTGGACACCATGCACCAGGGCAGTGGCTGTaGAGACCAAAGGTTGGCCAA +
Preference number: 4 (lower is better)
Translates to: RMTSKYSYGHPPQSGHHAPGQWL*RPKVGQ
Trigger: TTGGCCAACCTTTGGTCTTCACAGCCACTGCCCTGG...TGCATGGTGTCCACTTTGAGGGGGATGCCCATAGCTATACTTAGAAGTCATCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR GCA 90 bp CACAGGTACGTAAGTGGACACCTGCAGCCTCTCGCTCTGGAACAGCCGATAGGGGGTCCAACAGTCATGTaGCAGAGCATACAAAAAGAT +
Preference number: 4 (lower is better)
Translates to: HRYVSGHLQPLALEQPIGGPTVM*QSIQKD
Trigger: ATCTTTTTGTATGCTCTGGCACATGACTGTTGGACC...CCCTATCGGCTGTTCCAGAGCGAGAGGCTGCAGGTGTCCACTTACGTACCTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR CCA 90 bp CACAGGTACGTAAGTGGACACCTGCAGCCTCTCGCTCTGGAACAGCCGATAGGGAGCAAAAGAAACAAATaGCTCACGAGCCTTTTCCTC +
Preference number: 4 (lower is better)
Translates to: HRYVSGHLQPLALEQPIGSKRNK*LTSLFL
Trigger: GAGGAAAAGGCTCGTGAGCCATTTGTTTCTTTTGCT...CCCTATCGGCTGTTCCAGAGCGAGAGGCTGCAGGTGTCCACTTACGTACCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR TCA 90 bp CAGATACATCGCATGCAAGAAGGGCAAGTCATATTTCAGGATCCTTCTGTCATGGGGCACAAGGGGGCATaGGGGAAATGGCTGAACTCC +
Preference number: 4 (lower is better)
Translates to: QIHRMQEGQVIFQDPSVMGHKGA*GKWLNS
Trigger: GGAGTTCAGCCATTTCCCTCATGCCCCCTTGTGCCC...CATGACAGAAGGATCCTGAAATATGACTTGCCCTTCTTGCATGCGATGTATCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR TCA 90 bp AGGATGACTTCTAAGTATAGCTATGGGCATCCCCCTCAAAGTGGACACCATGCAGGAGGGCGGATTACCTaGAGTCAGGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: RMTSKYSYGHPPQSGHHAGGRIT*SQEFKT
Trigger: GGTCTTGAACTCCTGACTTCAGGTAATCCGCCCTCC...TGCATGGTGTCCACTTTGAGGGGGATGCCCATAGCTATACTTAGAAGTCATCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR TCA 90 bp ACAAAATGTGGCCACGTTGTGGTATCACAGCATCTGTCACAGTGTTTTGAGCCCGAGCACCTGCCCACATaGTACCTGGGGGTGCAAATT +
Preference number: 4 (lower is better)
Translates to: TKCGHVVVSQHLSQCFEPEHLPT*YLGVQI
Trigger: AATTTGCACCCCCAGGTATCATGTGGGCAGGTGCTC...GGGCTCAAAACACTGTGACAGATGCTGTGATACCACAACGTGGCCACATTTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR CCA 90 bp AACAAATGGCTCACGAGCCTTTTCCTCTACCATTTAAGGTCCAGAAAGAATGCAACGGCGCCGGTGTGCTaGTACTTGAGCCGCATGGAG +
Preference number: 4 (lower is better)
Translates to: NKWLTSLFLYHLRSRKNATAPVC*YLSRME
Trigger: CTCCATGCGGCTCAAGTACCAGCACACCGGCGCCGT...TGCATTCTTTCTGGACCTTAAATGGTAGAGGAAAAGGCTCGTGAGCCATTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR CCA 90 bp CACAGGTACGTAAGTGGACACCTGCAGCCTCTCGCTCTGGAACAGCCGATAGGGCATCAGAACCACCTGTaGCAAATGTATTGTGGATAT +
Preference number: 4 (lower is better)
Translates to: HRYVSGHLQPLALEQPIGHQNHL*QMYCGY
Trigger: ATATCCACAATACATTTGCCACAGGTGGTTCTGATG...CCCTATCGGCTGTTCCAGAGCGAGAGGCTGCAGGTGTCCACTTACGTACCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR CCA 90 bp TGTGAAGACCAAAGGTTGGCCAAGGTCTTGAAAACAAAATGTGGCCACGTTGTGACTCCAGGCATGCGTTaGATCGTAGAAGGCGCAGTC +
Preference number: 4 (lower is better)
Translates to: CEDQRLAKVLKTKCGHVVTPGMR*IVEGAV
Trigger: GACTGCGCCTTCTACGATCCAACGCATGCCTGGAGT...CACAACGTGGCCACATTTTGTTTTCAAGACCTTGGCCAACCTTTGGTCTTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR CCA 90 bp AGGATGACTTCTAAGTATAGCTATGGGCATCCCCCTCAAAGTGGACACCATGCACTCGTGGGGTACCGATaGAATTGGCACAGTCGCTTT +
Preference number: 4 (lower is better)
Translates to: RMTSKYSYGHPPQSGHHALVGYR*NWHSRF
Trigger: AAAGCGACTGTGCCAATTCCATCGGTACCCCACGAG...TGCATGGTGTCCACTTTGAGGGGGATGCCCATAGCTATACTTAGAAGTCATCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR CCA 90 bp CAGATACATCGCATGCAAGAAGGGCAAGTCATATTTCAGGATCCTTCTGTCATGCCTTCAAAGCCATCCTaGGCAGCATGTGGCCCATGG +
Preference number: 4 (lower is better)
Translates to: QIHRMQEGQVIFQDPSVMPSKPS*AACGPW
Trigger: CCATGGGCCACATGCTGCCCAGGATGGCTTTGAAGG...CATGACAGAAGGATCCTGAAATATGACTTGCCCTTCTTGCATGCGATGTATCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR CAA 72 bp GGAGCACCTGCCCACATGATACCTGGGGGTGCAAATTaGAAGTTGCCATTTTCCCTCCATGTCATGGAATTC +
Preference number: 4 (lower is better)
Translates to: GAPAHMIPGGAN*KLPFSLHVMEF
Trigger: GAATTCCATGACATGGAGGGAAAATGGCAACTTCAAATTTGCACCCCCAGGTATCATGTGGGCAGGTGCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR CAA 72 bp GGCAGTGGCTGTGAAGACCAAAGGTTGGCCAAGGTCTaGAAAACAAAATGTGGCCACGTTGTGGTATCACAG +
Preference number: 4 (lower is better)
Translates to: GSGCEDQRLAKV*KTKCGHVVVSQ
Trigger: CTGTGATACCACAACGTGGCCACATTTTGTTTTCAAGACCTTGGCCAACCTTTGGTCTTCACAGCCACTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR CAA 72 bp ACCAGAAGGCTCTCGAACAAGGAATTTCTGCCCACATaGCTTTTCCTAGTGCCCAGATTGTCACAGTGCCTG +
Preference number: 4 (lower is better)
Translates to: TRRLSNKEFLPT*LFLVPRLSQCL
Trigger: CAGGCACTGTGACAATCTGGGCACTAGGAAAAGCAATGTGGGCAGAAATTCCTTGTTCGAGAGCCTTCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR TCA 90 bp CAGATACATCGCATGCAAGAAGGGCAAGTCATATTTCAGGATCCTTCTGTCATGAGTCTCTGCCCATCCTaGGTGAAGCTGCACACTTGG +
Preference number: 4 (lower is better)
Translates to: QIHRMQEGQVIFQDPSVMSLCPS*VKLHTW
Trigger: CCAAGTGTGCAGCTTCACTCAGGATGGGCAGAGACT...CATGACAGAAGGATCCTGAAATATGACTTGCCCTTCTTGCATGCGATGTATCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR GCA 90 bp CAGATACATCGCATGCAAGAAGGGCAAGTCATATTTCAGGATCCTTCTGTCATGGCAACTTCAGCTCACTaGAACCTCAACCTCCCGCAC +
Preference number: 4 (lower is better)
Translates to: QIHRMQEGQVIFQDPSVMATSAH*NLNLPH
Trigger: GTGCGGGAGGTTGAGGTTGCAGTGAGCTGAAGTTGC...CATGACAGAAGGATCCTGAAATATGACTTGCCCTTCTTGCATGCGATGTATCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR TCA 90 bp TGTGAAGACCAAAGGTTGGCCAAGGTCTTGAAAACAAAATGTGGCCACGTTGTGCCGGTCTCCAGACACTaGGAGGGTATATACCTTTTC +
Preference number: 4 (lower is better)
Translates to: CEDQRLAKVLKTKCGHVVPVSRH*EGIYLF
Trigger: GAAAAGGTATATACCCTCTCAGTGTCTGGAGACCGG...CACAACGTGGCCACATTTTGTTTTCAAGACCTTGGCCAACCTTTGGTCTTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR GCA 90 bp AGGATGACTTCTAAGTATAGCTATGGGCATCCCCCTCAAAGTGGACACCATGCAACATCAACACGGGGATaGACAAGCTACCTAAGCACT +
Preference number: 4 (lower is better)
Translates to: RMTSKYSYGHPPQSGHHATSTRG*TSYLST
Trigger: AGTGCTTAGGTAGCTTGTGCATCCCCGTGTTGATGT...TGCATGGTGTCCACTTTGAGGGGGATGCCCATAGCTATACTTAGAAGTCATCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR GCA 90 bp TGTGAAGACCAAAGGTTGGCCAAGGTCTTGAAAACAAAATGTGGCCACGTTGTGAGGCTGTGTGGCTTGTaGAAGTCACACCATCCCAAA +
Preference number: 4 (lower is better)
Translates to: CEDQRLAKVLKTKCGHVVRLCGL*KSHHPK
Trigger: TTTGGGATGGTGTGACTTGCACAAGCCACACAGCCT...CACAACGTGGCCACATTTTGTTTTCAAGACCTTGGCCAACCTTTGGTCTTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR GCA 90 bp GATACATCGCATGCAAGAAGGGCAAGTCATATTTCAGGATCCTTCTGTCATGTACTGAGGCAGGAGAATTaGTTGAACCCGAGAGGCGGA +
Preference number: 4 (lower is better)
Translates to: DTSHARRASHISGSFCHVLRQEN*LNPRGG
Trigger: TCCGCCTCTCGGGTTCAAGCAATTCTCCTGCCTCAG...TACATGACAGAAGGATCCTGAAATATGACTTGCCCTTCTTGCATGCGATGTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR CCA 90 bp CAGATACATCGCATGCAAGAAGGGCAAGTCATATTTCAGGATCCTTCTGTCATGGTGAAGCTGCACACTTaGCTCAAAGGCCCTGCTGAT +
Preference number: 4 (lower is better)
Translates to: QIHRMQEGQVIFQDPSVMVKLHT*LKGPAD
Trigger: ATCAGCAGGGCCTTTGAGCCAAGTGTGCAGCTTCAC...CATGACAGAAGGATCCTGAAATATGACTTGCCCTTCTTGCATGCGATGTATCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR CCA 90 bp AGGATGACTTCTAAGTATAGCTATGGGCATCCCCCTCAAAGTGGACACCATGCAAATGTGGCCACGTTGTaGTATCACAGCATCTGTCAC +
Preference number: 4 (lower is better)
Translates to: RMTSKYSYGHPPQSGHHANVATL*YHSICH
Trigger: GTGACAGATGCTGTGATACCACAACGTGGCCACATT...TGCATGGTGTCCACTTTGAGGGGGATGCCCATAGCTATACTTAGAAGTCATCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR TCA 90 bp AGGATGACTTCTAAGTATAGCTATGGGCATCCCCCTCAAAGTGGACACCATGCATCAAATCACACTGCCTaGCCTGTTAAACCAGCAGAT +
Preference number: 4 (lower is better)
Translates to: RMTSKYSYGHPPQSGHHASNHTA*PVKPAD
Trigger: ATCTGCTGGTTTAACAGGTCAGGCAGTGTGATTTGA...TGCATGGTGTCCACTTTGAGGGGGATGCCCATAGCTATACTTAGAAGTCATCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR GCA 90 bp ACTCAGAACCAGATATTGCTGTCACTTCCCATCCCATCCACTTATTTATATTCCAAGGTCCCCAGAGGCTaGCACATAGTCTCTGCCCAT +
Preference number: 4 (lower is better)
Translates to: TQNQILLSLPIPSTYLYSKVPRG*HIVSAH
Trigger: ATGGGCAGAGACTATGTGGCAGCCTCTGGGGACCTT...GGAATATAAATAAGTGGATGGGATGGGAAGTGACAGCAATATCTGGTTCTGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR GCA 90 bp AACAAATGGCTCACGAGCCTTTTCCTCTACCATTTAAGGTCCAGAAAGAATGCATCAAAGTGGACACCATaGAGGCTGTGTGGCTTGTGC +
Preference number: 4 (lower is better)
Translates to: NKWLTSLFLYHLRSRKNASKWTP*RLCGLC
Trigger: GCACAAGCCACACAGCCTGCATGGTGTCCACTTTGA...TGCATTCTTTCTGGACCTTAAATGGTAGAGGAAAAGGCTCGTGAGCCATTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR CCA 90 bp ACAAAATGTGGCCACGTTGTGGTATCACAGCATCTGTCACAGTGTTTTGAGCCCCTGTCCTCAACCAAGTaGTTAGGGACTTTTAGAAGC +
Preference number: 4 (lower is better)
Translates to: TKCGHVVVSQHLSQCFEPLSSTK*LGTFRS
Trigger: GCTTCTAAAAGTCCCTAACCACTTGGTTGAGGACAG...GGGCTCAAAACACTGTGACAGATGCTGTGATACCACAACGTGGCCACATTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR CCA 90 bp ACAAAATGTGGCCACGTTGTGGTATCACAGCATCTGTCACAGTGTTTTGAGCCCCAAGGTAACTACACCTaGGTAACTTGGGGAAAAGGT +
Preference number: 4 (lower is better)
Translates to: TKCGHVVVSQHLSQCFEPQGNYT*VTWGKG
Trigger: ACCTTTTCCCCAAGTTACCCAGGTGTAGTTACCTTG...GGGCTCAAAACACTGTGACAGATGCTGTGATACCACAACGTGGCCACATTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR CCA 90 bp ACAAAATGTGGCCACGTTGTGGTATCACAGCATCTGTCACAGTGTTTTGAGCCCACCTGTCTAGTGCACTaGACAAGATGTCTATACTCC +
Preference number: 4 (lower is better)
Translates to: TKCGHVVVSQHLSQCFEPTCLVH*TRCLYS
Trigger: GGAGTATAGACATCTTGTCCAGTGCACTAGACAGGT...GGGCTCAAAACACTGTGACAGATGCTGTGATACCACAACGTGGCCACATTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR CCA 90 bp GATACATCGCATGCAAGAAGGGCAAGTCATATTTCAGGATCCTTCTGTCATGTAACCATGCAGGCTGTGTaGCTTGTGCAAGTCACACCA +
Preference number: 4 (lower is better)
Translates to: DTSHARRASHISGSFCHVTMQAV*LVQVTP
Trigger: TGGTGTGACTTGCACAAGCCACACAGCCTGCATGGT...TACATGACAGAAGGATCCTGAAATATGACTTGCCCTTCTTGCATGCGATGTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR CCA 90 bp ACTCAGAACCAGATATTGCTGTCACTTCCCATCCCATCCACTTATTTATATTCCTCCCAACTACTCGGGTaGCTGAGGCAGGAGAATTGC +
Preference number: 4 (lower is better)
Translates to: TQNQILLSLPIPSTYLYSSQLLG*LRQENC
Trigger: GCAATTCTCCTGCCTCAGCCACCCGAGTAGTTGGGA...GGAATATAAATAAGTGGATGGGATGGGAAGTGACAGCAATATCTGGTTCTGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR TCA 90 bp TTGCTGTCACTTCCCATCCCATCCACTTATTTATATTCCCAACAAAGGTTAGTCGCACTAGTAAAGCACTaGGCCAAAAGGTCCCCAGAG +
Preference number: 4 (lower is better)
Translates to: LLSLPIPSTYLYSQQRLVALVKH*AKRSPE
Trigger: CTCTGGGGACCTTTTGGCTCAGTGCTTTACTAGTGC...GACTAACCTTTGTTGGGAATATAAATAAGTGGATGGGATGGGAAGTGACAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR TCA 90 bp GATACATCGCATGCAAGAAGGGCAAGTCATATTTCAGGATCCTTCTGTCATGTAGCTCTGTGTGGACTATaGCTACATCAACACGGGGAT +
Preference number: 4 (lower is better)
Translates to: DTSHARRASHISGSFCHVALCGL*LHQHGD
Trigger: ATCCCCGTGTTGATGTAGTCATAGTCCACACAGAGC...TACATGACAGAAGGATCCTGAAATATGACTTGCCCTTCTTGCATGCGATGTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR TCA 90 bp TTGCTGTCACTTCCCATCCCATCCACTTATTTATATTCCCAACAAAGGTTAGTCGTTAGTCCCATCTTCTaGGAGCACCTTACAGTCCGC +
Preference number: 4 (lower is better)
Translates to: LLSLPIPSTYLYSQQRLVVSPIF*EHLTVR
Trigger: GCGGACTGTAAGGTGCTCTCAGAAGATGGGACTAAC...GACTAACCTTTGTTGGGAATATAAATAAGTGGATGGGATGGGAAGTGACAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR TCA 90 bp GATACATCGCATGCAAGAAGGGCAAGTCATATTTCAGGATCCTTCTGTCATGTATGGAAAAGGGGGCCTTaGACAGGACTTTGCAGGATT +
Preference number: 4 (lower is better)
Translates to: DTSHARRASHISGSFCHVWKRGP*TGLCRI
Trigger: AATCCTGCAAAGTCCTGTTCAAGGCCCCCTTTTCCA...TACATGACAGAAGGATCCTGAAATATGACTTGCCCTTCTTGCATGCGATGTATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR TCA 90 bp AACAAATGGCTCACGAGCCTTTTCCTCTACCATTTAAGGTCCAGAAAGAATGCACTGGGGGTGCAAATTTaGAGTTGCCATTTTCCCTCC +
Preference number: 4 (lower is better)
Translates to: NKWLTSLFLYHLRSRKNALGVQI*SCHFPS
Trigger: GGAGGGAAAATGGCAACTTCAAATTTGCACCCCCAG...TGCATTCTTTCTGGACCTTAAATGGTAGAGGAAAAGGCTCGTGAGCCATTTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR TCA 90 bp AACAAATGGCTCACGAGCCTTTTCCTCTACCATTTAAGGTCCAGAAAGAATGCAGTGGGCTCAAAGATTTaGCAAGATGCTAGGCTCCCT +
Preference number: 4 (lower is better)
Translates to: NKWLTSLFLYHLRSRKNAVGSKI*QDARLP
Trigger: AGGGAGCCTAGCATCTTGTCAAATCTTTGAGCCCAC...TGCATTCTTTCTGGACCTTAAATGGTAGAGGAAAAGGCTCGTGAGCCATTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR GCA 90 bp TTGCTGTCACTTCCCATCCCATCCACTTATTTATATTCCCAACAAAGGTTAGTCCTCAGTAGGCTAATGTaGGTTGAGTCCCCACTGAGG +
Preference number: 4 (lower is better)
Translates to: LLSLPIPSTYLYSQQRLVLSRLM*VESPLR
Trigger: CCTCAGTGGGGACTCAACGCACATTAGCCTACTGAG...GACTAACCTTTGTTGGGAATATAAATAAGTGGATGGGATGGGAAGTGACAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR GCA 90 bp AGGATGACTTCTAAGTATAGCTATGGGCATCCCCCTCAAAGTGGACACCATGCACATGATACCTGGGGGTaGAAATTTGAAGTTGCCATT +
Preference number: 4 (lower is better)
Translates to: RMTSKYSYGHPPQSGHHAHDTWG*KFEVAI
Trigger: AATGGCAACTTCAAATTTGCACCCCCAGGTATCATG...TGCATGGTGTCCACTTTGAGGGGGATGCCCATAGCTATACTTAGAAGTCATCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR GCA 90 bp ACTCAGAACCAGATATTGCTGTCACTTCCCATCCCATCCACTTATTTATATTCCGCTGGAGTGCAGTGGTaGAACTTCAGCTCACTGCAA +
Preference number: 4 (lower is better)
Translates to: TQNQILLSLPIPSTYLYSAGVQW*NFSSLQ
Trigger: TTGCAGTGAGCTGAAGTTGCACCACTGCACTCCAGC...GGAATATAAATAAGTGGATGGGATGGGAAGTGACAGCAATATCTGGTTCTGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR CCA 90 bp AGGATGACTTCTAAGTATAGCTATGGGCATCCCCCTCAAAGTGGACACCATGCATCAGCAATATCAAAGTaGTCCAACAGTCATGTGCCA +
Preference number: 4 (lower is better)
Translates to: RMTSKYSYGHPPQSGHHASAISK*SNSHVP
Trigger: TGGCACATGACTGTTGGACCACTTTGATATTGCTGA...TGCATGGTGTCCACTTTGAGGGGGATGCCCATAGCTATACTTAGAAGTCATCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR CCA 90 bp GATACATCGCATGCAAGAAGGGCAAGTCATATTTCAGGATCCTTCTGTCATGTAATCCTGGGCAGCATGTaGCCCATGGACAACAAATTG +
Preference number: 4 (lower is better)
Translates to: DTSHARRASHISGSFCHVILGSM*PMDNKL
Trigger: CAATTTGTTGTCCATGGGCCACATGCTGCCCAGGAT...TACATGACAGAAGGATCCTGAAATATGACTTGCCCTTCTTGCATGCGATGTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR CCA 90 bp AACAAATGGCTCACGAGCCTTTTCCTCTACCATTTAAGGTCCAGAAAGAATGCAGGGTGTCCAATCTTTTaGCTTTCCTGGTCCACACTG +
Preference number: 4 (lower is better)
Translates to: NKWLTSLFLYHLRSRKNAGCPIF*LSWSTL
Trigger: CAGTGTGGACCAGGAAAGCCAAAAGATTGGACACCC...TGCATTCTTTCTGGACCTTAAATGGTAGAGGAAAAGGCTCGTGAGCCATTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR CCA 90 bp AACAAATGGCTCACGAGCCTTTTCCTCTACCATTTAAGGTCCAGAAAGAATGCAGGCCCTCTGAGTGAGTaGGCTCAAAGATTTGACAAG +
Preference number: 4 (lower is better)
Translates to: NKWLTSLFLYHLRSRKNAGPLSE*AQRFDK
Trigger: CTTGTCAAATCTTTGAGCCCACTCACTCAGAGGGCC...TGCATTCTTTCTGGACCTTAAATGGTAGAGGAAAAGGCTCGTGAGCCATTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368865.9
3UTR CAA 72 bp AGTGCCCAGATTGTCACAGTGCCTGCATTAGCCACTTaGGTGATCTTAGACTTCAAGCAGTCACCAAACTTA +
Preference number: 4 (lower is better)
Translates to: SAQIVTVPALAT*VILDFKQSPNL
Trigger: TAAGTTTGGTGACTGCTTGAAGTCTAAGATCACCAAAGTGGCTAATGCAGGCACTGTGACAATCTGGGCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR TCA 90 bp GATACATCGCATGCAAGAAGGGCAAGTCATATTTCAGGATCCTTCTGTCATGTACACTTTATGCAGGACTaGATCCCCAACACACATCAG +
Preference number: 4 (lower is better)
Translates to: DTSHARRASHISGSFCHVHFMQD*IPNTHQ
Trigger: CTGATGTGTGTTGGGGATTCAGTCCTGCATAAAGTG...TACATGACAGAAGGATCCTGAAATATGACTTGCCCTTCTTGCATGCGATGTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR TCA 90 bp TGTGAAGACCAAAGGTTGGCCAAGGTCTTGAAAACAAAATGTGGCCACGTTGTGCATGAGGGAAATGGCTaGACTCCAACAAATCACTTT +
Preference number: 4 (lower is better)
Translates to: CEDQRLAKVLKTKCGHVVHEGNG*TPTNHF
Trigger: AAAGTGATTTGTTGGAGTTCAGCCATTTCCCTCATG...CACAACGTGGCCACATTTTGTTTTCAAGACCTTGGCCAACCTTTGGTCTTCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR TCA 90 bp TGTGAAGACCAAAGGTTGGCCAAGGTCTTGAAAACAAAATGTGGCCACGTTGTGAAATGCCAGGCAATATaGGGAACTACTGCTAAAGGT +
Preference number: 4 (lower is better)
Translates to: CEDQRLAKVLKTKCGHVVKCQAI*GTTAKG
Trigger: ACCTTTAGCAGTAGTTCCTCATATTGCCTGGCATTT...CACAACGTGGCCACATTTTGTTTTCAAGACCTTGGCCAACCTTTGGTCTTCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR TCA 90 bp GATACATCGCATGCAAGAAGGGCAAGTCATATTTCAGGATCCTTCTGTCATGTAAGATTCAATTCTGGATaGGTGACAGGCCCTCTGAGT +
Preference number: 4 (lower is better)
Translates to: DTSHARRASHISGSFCHVRFNSG*VTGPLS
Trigger: ACTCAGAGGGCCTGTCACTCATCCAGAATTGAATCT...TACATGACAGAAGGATCCTGAAATATGACTTGCCCTTCTTGCATGCGATGTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR GCA 90 bp ACTCAGAACCAGATATTGCTGTCACTTCCCATCCCATCCACTTATTTATATTCCGCAGAAATTGGAGGCTaGCACATTCACCCAAAAGGC +
Preference number: 4 (lower is better)
Translates to: TQNQILLSLPIPSTYLYSAEIGG*HIHPKG
Trigger: GCCTTTTGGGTGAATGTGGCAGCCTCCAATTTCTGC...GGAATATAAATAAGTGGATGGGATGGGAAGTGACAGCAATATCTGGTTCTGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR CCA 90 bp TTTCCTGGTCCACACTGGAAGAATTGTCTTGAGCTACACATAAAATACACTAATGATGCCATCCTCGGGTaGCTGGTTCAGCTTGAACTC +
Preference number: 4 (lower is better)
Translates to: FPGPHWKNCLELHIKYTNDAILG*LVQLEL
Trigger: GAGTTCAAGCTGAACCAGCCACCCGAGGATGGCATC...ATTAGTGTATTTTATGTGTAGCTCAAGACAATTCTTCCAGTGTGGACCAGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR CCA 90 bp AACAAATGGCTCACGAGCCTTTTCCTCTACCATTTAAGGTCCAGAAAGAATGCAATAACCCTGCTTGTTTaGAAACGCTCGTATGCAGCG +
Preference number: 4 (lower is better)
Translates to: NKWLTSLFLYHLRSRKNAITLLV*KRSYAA
Trigger: CGCTGCATACGAGCGTTTCCAAACAAGCAGGGTTAT...TGCATTCTTTCTGGACCTTAAATGGTAGAGGAAAAGGCTCGTGAGCCATTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR CCA 90 bp TTTCCTGGTCCACACTGGAAGAATTGTCTTGAGCTACACATAAAATACACTAATGTGATGCGATGCTCGTaGGGTACCGATGGAATTGGC +
Preference number: 4 (lower is better)
Translates to: FPGPHWKNCLELHIKYTNVMRCS*GTDGIG
Trigger: GCCAATTCCATCGGTACCCCACGAGCATCGCATCAC...ATTAGTGTATTTTATGTGTAGCTCAAGACAATTCTTCCAGTGTGGACCAGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR CCA 90 bp TGTGAAGACCAAAGGTTGGCCAAGGTCTTGAAAACAAAATGTGGCCACGTTGTGAAGAGGACATCCAGATaGAACCACAAAATAAGCCCT +
Preference number: 4 (lower is better)
Translates to: CEDQRLAKVLKTKCGHVVKRTSR*NHKISP
Trigger: AGGGCTTATTTTGTGGTTCCATCTGGATGTCCTCTT...CACAACGTGGCCACATTTTGTTTTCAAGACCTTGGCCAACCTTTGGTCTTCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR CCA 90 bp ACTCAGAACCAGATATTGCTGTCACTTCCCATCCCATCCACTTATTTATATTCCGAACCTAGCAGTGGCTaGCACATCACAGGCACTAAA +
Preference number: 4 (lower is better)
Translates to: TQNQILLSLPIPSTYLYSEPSSG*HITGTK
Trigger: TTTAGTGCCTGTGATGTGCCAGCCACTGCTAGGTTC...GGAATATAAATAAGTGGATGGGATGGGAAGTGACAGCAATATCTGGTTCTGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR CCA 90 bp GATACATCGCATGCAAGAAGGGCAAGTCATATTTCAGGATCCTTCTGTCATGTACAGCAGATTCAATTCTaGATGAGTGACAGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: DTSHARRASHISGSFCHVQQIQF*MSDRPS
Trigger: AGAGGGCCTGTCACTCATCCAGAATTGAATCTGCTG...TACATGACAGAAGGATCCTGAAATATGACTTGCCCTTCTTGCATGCGATGTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR CCA 90 bp TTGCTGTCACTTCCCATCCCATCCACTTATTTATATTCCCAACAAAGGTTAGTCGCCAGGTTCAAAGGCTaGACTCTAAGATTCACGCTG +
Preference number: 4 (lower is better)
Translates to: LLSLPIPSTYLYSQQRLVARFKG*TLRFTL
Trigger: CAGCGTGAATCTTAGAGTCCAGCCTTTGAACCTGGC...GACTAACCTTTGTTGGGAATATAAATAAGTGGATGGGATGGGAAGTGACAGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR TCA 90 bp GATACATCGCATGCAAGAAGGGCAAGTCATATTTCAGGATCCTTCTGTCATGTAAGATTAACCTCCTCATaGAGCAGTCTGAAGCAGCTT +
Preference number: 4 (lower is better)
Translates to: DTSHARRASHISGSFCHVRLTSS*SSLKQL
Trigger: AAGCTGCTTCAGACTGCTTCATGAGGAGGTTAATCT...TACATGACAGAAGGATCCTGAAATATGACTTGCCCTTCTTGCATGCGATGTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR TCA 90 bp TTGCTGTCACTTCCCATCCCATCCACTTATTTATATTCCCAACAAAGGTTAGTCGGGCACACTTATTTGTaGGCTGCAACAAGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: LLSLPIPSTYLYSQQRLVGHTYL*AATRKK
Trigger: CTTCTTCCTTGTTGCAGCTCACAAATAAGTGTGCCC...GACTAACCTTTGTTGGGAATATAAATAAGTGGATGGGATGGGAAGTGACAGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR GCA 90 bp AGGATGACTTCTAAGTATAGCTATGGGCATCCCCCTCAAAGTGGACACCATGCACCCTCCAATTTTGTTTaGCCAAATACCTTTAATGCA +
Preference number: 4 (lower is better)
Translates to: RMTSKYSYGHPPQSGHHAPSNFV*PNTFNA
Trigger: TGCATTAAAGGTATTTGGGCAAACAAAATTGGAGGG...TGCATGGTGTCCACTTTGAGGGGGATGCCCATAGCTATACTTAGAAGTCATCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR GCA 90 bp AACAAATGGCTCACGAGCCTTTTCCTCTACCATTTAAGGTCCAGAAAGAATGCACTCAGAACCAGATATTaGTGTCACTTCCCATCCCAT +
Preference number: 4 (lower is better)
Translates to: NKWLTSLFLYHLRSRKNALRTRY*CHFPSH
Trigger: ATGGGATGGGAAGTGACAGCAATATCTGGTTCTGAG...TGCATTCTTTCTGGACCTTAAATGGTAGAGGAAAAGGCTCGTGAGCCATTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR GCA 90 bp CAGATACATCGCATGCAAGAAGGGCAAGTCATATTTCAGGATCCTTCTGTCATGCACTTATTTGTGAGCTaGAACAAGGAAGAAGGGCTT +
Preference number: 4 (lower is better)
Translates to: QIHRMQEGQVIFQDPSVMHLFVS*NKEEGL
Trigger: AAGCCCTTCTTCCTTGTTGCAGCTCACAAATAAGTG...CATGACAGAAGGATCCTGAAATATGACTTGCCCTTCTTGCATGCGATGTATCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR GCA 90 bp GATACATCGCATGCAAGAAGGGCAAGTCATATTTCAGGATCCTTCTGTCATGTAGATTGTCACAGTGCCTaGATTAGCCACTTTGGTGAT +
Preference number: 4 (lower is better)
Translates to: DTSHARRASHISGSFCHVDCHSA*ISHFGD
Trigger: ATCACCAAAGTGGCTAATGCAGGCACTGTGACAATC...TACATGACAGAAGGATCCTGAAATATGACTTGCCCTTCTTGCATGCGATGTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR CCA 90 bp GATACATCGCATGCAAGAAGGGCAAGTCATATTTCAGGATCCTTCTGTCATGTAGGGTACCGATGGAATTaGCACAGTCGCTTTTTGTTA +
Preference number: 4 (lower is better)
Translates to: DTSHARRASHISGSFCHVGYRWN*HSRFLL
Trigger: TAACAAAAAGCGACTGTGCCAATTCCATCGGTACCC...TACATGACAGAAGGATCCTGAAATATGACTTGCCCTTCTTGCATGCGATGTATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR CCA 90 bp GATACATCGCATGCAAGAAGGGCAAGTCATATTTCAGGATCCTTCTGTCATGTAAGCAACAGGAAGCAGTaGAGGATTCCAAGTATGACA +
Preference number: 4 (lower is better)
Translates to: DTSHARRASHISGSFCHVSNRKQ*RIPSMT
Trigger: TGTCATACTTGGAATCCTCCACTGCTTCCTGTTGCT...TACATGACAGAAGGATCCTGAAATATGACTTGCCCTTCTTGCATGCGATGTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR CCA 90 bp ACTCAGAACCAGATATTGCTGTCACTTCCCATCCCATCCACTTATTTATATTCCCCTTCTAACAAGGCCTaGATCTCCCACAGAACAAAG +
Preference number: 4 (lower is better)
Translates to: TQNQILLSLPIPSTYLYSPSNKA*ISHRTK
Trigger: CTTTGTTCTGTGGGAGATCCAGGCCTTGTTAGAAGG...GGAATATAAATAAGTGGATGGGATGGGAAGTGACAGCAATATCTGGTTCTGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR GCA 90 bp AACAAATGGCTCACGAGCCTTTTCCTCTACCATTTAAGGTCCAGAAAGAATGCAACAGGTCCAAATAGATaGCTGTCTAAATGCACTGCA +
Preference number: 4 (lower is better)
Translates to: NKWLTSLFLYHLRSRKNATGPNR*LSKCTA
Trigger: TGCAGTGCATTTAGACAGGCATCTATTTGGACCTGT...TGCATTCTTTCTGGACCTTAAATGGTAGAGGAAAAGGCTCGTGAGCCATTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR GCA 90 bp TGTGAAGACCAAAGGTTGGCCAAGGTCTTGAAAACAAAATGTGGCCACGTTGTGTGTGATGACGAGTTTTaGCTTACACAAGCCTTTTTA +
Preference number: 4 (lower is better)
Translates to: CEDQRLAKVLKTKCGHVVCDDEF*LTQAFL
Trigger: TAAAAAGGCTTGTGTAAGGCAAAACTCGTCATCACA...CACAACGTGGCCACATTTTGTTTTCAAGACCTTGGCCAACCTTTGGTCTTCACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR CCA 90 bp ACAAAATGTGGCCACGTTGTGGTATCACAGCATCTGTCACAGTGTTTTGAGCCCAACAATTTGCCCTTCTaGGATCAATTGTTTGCTAAT +
Preference number: 4 (lower is better)
Translates to: TKCGHVVVSQHLSQCFEPNNLPF*DQLFAN
Trigger: ATTAGCAAACAATTGATCCCAGAAGGGCAAATTGTT...GGGCTCAAAACACTGTGACAGATGCTGTGATACCACAACGTGGCCACATTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR CCA 90 bp TTTCCTGGTCCACACTGGAAGAATTGTCTTGAGCTACACATAAAATACACTAATATGCTAAGGCTAAACTaGGCATTCTGGCCTTGGTCC +
Preference number: 4 (lower is better)
Translates to: FPGPHWKNCLELHIKYTNMLRLN*AFWPWS
Trigger: GGACCAAGGCCAGAATGCCCAGTTTAGCCTTAGCAT...ATTAGTGTATTTTATGTGTAGCTCAAGACAATTCTTCCAGTGTGGACCAGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR CCA 90 bp ACTCAGAACCAGATATTGCTGTCACTTCCCATCCCATCCACTTATTTATATTCCATTATGTATACTAACTaGCCCTCACTTGCTCAGGCG +
Preference number: 4 (lower is better)
Translates to: TQNQILLSLPIPSTYLYSIMYTN*PSLAQA
Trigger: CGCCTGAGCAAGTGAGGGCCAGTTAGTATACATAAT...GGAATATAAATAAGTGGATGGGATGGGAAGTGACAGCAATATCTGGTTCTGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR TCA 90 bp TTTCCTGGTCCACACTGGAAGAATTGTCTTGAGCTACACATAAAATACACTAATACCACTTTCACAGGATaGTTAGGTGGACCTGCAATG +
Preference number: 4 (lower is better)
Translates to: FPGPHWKNCLELHIKYTNTTFTG*LGGPAM
Trigger: CATTGCAGGTCCACCTAATCATCCTGTGAAAGTGGT...ATTAGTGTATTTTATGTGTAGCTCAAGACAATTCTTCCAGTGTGGACCAGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR TCA 90 bp GATACATCGCATGCAAGAAGGGCAAGTCATATTTCAGGATCCTTCTGTCATGTACTGACCTCTGTGTTCTaGACTGTAGTTCAAAATGTA +
Preference number: 4 (lower is better)
Translates to: DTSHARRASHISGSFCHVLTSVF*TVVQNV
Trigger: TACATTTTGAACTACAGTTCAGAACACAGAGGTCAG...TACATGACAGAAGGATCCTGAAATATGACTTGCCCTTCTTGCATGCGATGTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR TCA 90 bp CAGATACATCGCATGCAAGAAGGGCAAGTCATATTTCAGGATCCTTCTGTCATGCTCAATTTAACAAGGTaGTGGAGATGTTTAGTAACC +
Preference number: 4 (lower is better)
Translates to: QIHRMQEGQVIFQDPSVMLNLTR*WRCLVT
Trigger: GGTTACTAAACATCTCCATCACCTTGTTAAATTGAG...CATGACAGAAGGATCCTGAAATATGACTTGCCCTTCTTGCATGCGATGTATCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR GCA 90 bp TTGCTGTCACTTCCCATCCCATCCACTTATTTATATTCCCAACAAAGGTTAGTCAAAACTGCAGTCACTTaGCCTCCAATTTTGTTTGCC +
Preference number: 4 (lower is better)
Translates to: LLSLPIPSTYLYSQQRLVKTAVT*PPILFA
Trigger: GGCAAACAAAATTGGAGGGCAAGTGACTGCAGTTTT...GACTAACCTTTGTTGGGAATATAAATAAGTGGATGGGATGGGAAGTGACAGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR CCA 90 bp TGTGAAGACCAAAGGTTGGCCAAGGTCTTGAAAACAAAATGTGGCCACGTTGTGATACATTTCAAAAGATaGGTTCAGACTTACACCAAG +
Preference number: 4 (lower is better)
Translates to: CEDQRLAKVLKTKCGHVVIHFKR*VQTYTK
Trigger: CTTGGTGTAAGTCTGAACCCATCTTTTGAAATGTAT...CACAACGTGGCCACATTTTGTTTTCAAGACCTTGGCCAACCTTTGGTCTTCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR CCA 90 bp TGTGAAGACCAAAGGTTGGCCAAGGTCTTGAAAACAAAATGTGGCCACGTTGTGAATGTATTTCTTACTTaGGTCACAACTACAAGGTTC +
Preference number: 4 (lower is better)
Translates to: CEDQRLAKVLKTKCGHVVNVFLT*VTTTRF
Trigger: GAACCTTGTAGTTGTGACCCAAGTAAGAAATACATT...CACAACGTGGCCACATTTTGTTTTCAAGACCTTGGCCAACCTTTGGTCTTCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR CCA 90 bp GATACATCGCATGCAAGAAGGGCAAGTCATATTTCAGGATCCTTCTGTCATGTACTTGAAAACAAAATGTaGCCACGTTGTGGTATCACA +
Preference number: 4 (lower is better)
Translates to: DTSHARRASHISGSFCHVLENKM*PRCGIT
Trigger: TGTGATACCACAACGTGGCCACATTTTGTTTTCAAG...TACATGACAGAAGGATCCTGAAATATGACTTGCCCTTCTTGCATGCGATGTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR TCA 90 bp AACAAATGGCTCACGAGCCTTTTCCTCTACCATTTAAGGTCCAGAAAGAATGCACCAACAAGATTTTCTTaGTCAGTGTTCAAATCATGC +
Preference number: 4 (lower is better)
Translates to: NKWLTSLFLYHLRSRKNAPTRFS*SVFKSC
Trigger: GCATGATTTGAACACTGATCAAGAAAATCTTGTTGG...TGCATTCTTTCTGGACCTTAAATGGTAGAGGAAAAGGCTCGTGAGCCATTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR TCA 90 bp TTGCTGTCACTTCCCATCCCATCCACTTATTTATATTCCCAACAAAGGTTAGTCCATCAAGGTCAAAACTaGTTCTCAAAACTGCAGTCA +
Preference number: 4 (lower is better)
Translates to: LLSLPIPSTYLYSQQRLVHQGQN*FSKLQS
Trigger: TGACTGCAGTTTTGAGAATCAGTTTTGACCTTGATG...GACTAACCTTTGTTGGGAATATAAATAAGTGGATGGGATGGGAAGTGACAGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR TCA 90 bp TTTCCTGGTCCACACTGGAAGAATTGTCTTGAGCTACACATAAAATACACTAATCAGCGGCTGGTCAACTaGAATGGACATAAGAACTAT +
Preference number: 4 (lower is better)
Translates to: FPGPHWKNCLELHIKYTNQRLVN*NGHKNY
Trigger: ATAGTTCTTATGTCCATTTCAGTTGACCAGCCGCTG...ATTAGTGTATTTTATGTGTAGCTCAAGACAATTCTTCCAGTGTGGACCAGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR GCA 90 bp ACTCAGAACCAGATATTGCTGTCACTTCCCATCCCATCCACTTATTTATATTCCCTGACTCAAACAATTTaGCCTTCTGGGATCAATTGT +
Preference number: 4 (lower is better)
Translates to: TQNQILLSLPIPSTYLYSLTQTI*PSGINC
Trigger: ACAATTGATCCCAGAAGGGCAAATTGTTTGAGTCAG...GGAATATAAATAAGTGGATGGGATGGGAAGTGACAGCAATATCTGGTTCTGAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR GCA 90 bp GATACATCGCATGCAAGAAGGGCAAGTCATATTTCAGGATCCTTCTGTCATGTAAGATGCCTGTCTAAATaGACTGCAATTACGTTACAA +
Preference number: 4 (lower is better)
Translates to: DTSHARRASHISGSFCHVRCLSK*TAITLQ
Trigger: TTGTAACGTAATTGCAGTGCATTTAGACAGGCATCT...TACATGACAGAAGGATCCTGAAATATGACTTGCCCTTCTTGCATGCGATGTATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR GCA 90 bp AACAAATGGCTCACGAGCCTTTTCCTCTACCATTTAAGGTCCAGAAAGAATGCAAACATTCAAGGGTTCTaGATCTCGTTTATTAGCACA +
Preference number: 4 (lower is better)
Translates to: NKWLTSLFLYHLRSRKNANIQGF*ISFIST
Trigger: TGTGCTAATAAACGAGATGCAGAACCCTTGAATGTT...TGCATTCTTTCTGGACCTTAAATGGTAGAGGAAAAGGCTCGTGAGCCATTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR GCA 90 bp TTGCTGTCACTTCCCATCCCATCCACTTATTTATATTCCCAACAAAGGTTAGTCCAACAAATCACTTTATaGAGGACTGAATCCCCAACA +
Preference number: 4 (lower is better)
Translates to: LLSLPIPSTYLYSQQRLVQQITL*RTESPT
Trigger: TGTTGGGGATTCAGTCCTGCATAAAGTGATTTGTTG...GACTAACCTTTGTTGGGAATATAAATAAGTGGATGGGATGGGAAGTGACAGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR TCA 90 bp ACTCAGAACCAGATATTGCTGTCACTTCCCATCCCATCCACTTATTTATATTCCGTTTCATACGTGTTTTaGGAAAGGGCACACTTATTT +
Preference number: 4 (lower is better)
Translates to: TQNQILLSLPIPSTYLYSVSYVF*ERAHLF
Trigger: AAATAAGTGTGCCCTTTCTCAAAACACGTATGAAAC...GGAATATAAATAAGTGGATGGGATGGGAAGTGACAGCAATATCTGGTTCTGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR CCA 90 bp TTGCTGTCACTTCCCATCCCATCCACTTATTTATATTCCCAACAAAGGTTAGTCTTTATGAATTTGTTTTaGGCCACCTTCAAAGCCATC +
Preference number: 4 (lower is better)
Translates to: LLSLPIPSTYLYSQQRLVFMNLF*ATFKAI
Trigger: GATGGCTTTGAAGGTGGCCCAAAACAAATTCATAAA...GACTAACCTTTGTTGGGAATATAAATAAGTGGATGGGATGGGAAGTGACAGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR CCA 90 bp TTTCCTGGTCCACACTGGAAGAATTGTCTTGAGCTACACATAAAATACACTAATCACAGGATGATTAGGTaGACCTGCAATGAAGAAAAT +
Preference number: 4 (lower is better)
Translates to: FPGPHWKNCLELHIKYTNHRMIR*TCNEEN
Trigger: ATTTTCTTCATTGCAGGTCCACCTAATCATCCTGTG...ATTAGTGTATTTTATGTGTAGCTCAAGACAATTCTTCCAGTGTGGACCAGGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR CCA 90 bp ACTCAGAACCAGATATTGCTGTCACTTCCCATCCCATCCACTTATTTATATTCCAATACCATCAGTCCCTaGCTATTACATTATTTACCT +
Preference number: 4 (lower is better)
Translates to: TQNQILLSLPIPSTYLYSNTISP*LLHYLP
Trigger: AGGTAAATAATGTAATAGCCAGGGACTGATGGTATT...GGAATATAAATAAGTGGATGGGATGGGAAGTGACAGCAATATCTGGTTCTGAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR CCA 90 bp ACTCAGAACCAGATATTGCTGTCACTTCCCATCCCATCCACTTATTTATATTCCTATAGAAGATACCTTTaGCAAAGCAGGAGTTTAACA +
Preference number: 4 (lower is better)
Translates to: TQNQILLSLPIPSTYLYSYRRYL*QSRSLT
Trigger: TGTTAAACTCCTGCTTTGCCAAAGGTATCTTCTATA...GGAATATAAATAAGTGGATGGGATGGGAAGTGACAGCAATATCTGGTTCTGAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR TCA 90 bp TTTCCTGGTCCACACTGGAAGAATTGTCTTGAGCTACACATAAAATACACTAATTCATGTATAATATACTaGCCTCTGTGTTCTGAACTG +
Preference number: 4 (lower is better)
Translates to: FPGPHWKNCLELHIKYTNSCIIY*PLCSEL
Trigger: CAGTTCAGAACACAGAGGTCAGTATATTATACATGA...ATTAGTGTATTTTATGTGTAGCTCAAGACAATTCTTCCAGTGTGGACCAGGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR CAA 90 bp CACAGGTACGTAAGTGGACACCTGCAGCCTCTCGCTCTGGAACAGCCGATAGGGGGGGTACCGATGGAATaGGCACAGTCGCTTTTTGTT +
Preference number: 5 (lower is better)
Translates to: HRYVSGHLQPLALEQPIGGVPME*AQSLFV
Trigger: AACAAAAAGCGACTGTGCCAATTCCATCGGTACCCC...CCCTATCGGCTGTTCCAGAGCGAGAGGCTGCAGGTGTCCACTTACGTACCTGTG
56% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR CAA 90 bp CACAGGTACGTAAGTGGACACCTGCAGCCTCTCGCTCTGGAACAGCCGATAGGGCCTGGGGGTGCAAATTaGAAGTTGCCATTTTCCCTC +
Preference number: 5 (lower is better)
Translates to: HRYVSGHLQPLALEQPIGPGGAN*KLPFSL
Trigger: GAGGGAAAATGGCAACTTCAAATTTGCACCCCCAGG...CCCTATCGGCTGTTCCAGAGCGAGAGGCTGCAGGTGTCCACTTACGTACCTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR CAA 90 bp CAGATACATCGCATGCAAGAAGGGCAAGTCATATTTCAGGATCCTTCTGTCATGCCGGTGTGCTGGTACTaGAGCCGCATGGAGTTGGCC +
Preference number: 5 (lower is better)
Translates to: QIHRMQEGQVIFQDPSVMPVCWY*SRMELA
Trigger: GGCCAACTCCATGCGGCTCAAGTACCAGCACACCGG...CATGACAGAAGGATCCTGAAATATGACTTGCCCTTCTTGCATGCGATGTATCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR CAA 90 bp TGTGAAGACCAAAGGTTGGCCAAGGTCTTGAAAACAAAATGTGGCCACGTTGTGCTGTATCCCAGCACTTaGGGAGACCAAGGAGGGCGG +
Preference number: 5 (lower is better)
Translates to: CEDQRLAKVLKTKCGHVVLYPST*GDQGGR
Trigger: CCGCCCTCCTTGGTCTCCCAAAGTGCTGGGATACAG...CACAACGTGGCCACATTTTGTTTTCAAGACCTTGGCCAACCTTTGGTCTTCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR CAA 90 bp CACAGGTACGTAAGTGGACACCTGCAGCCTCTCGCTCTGGAACAGCCGATAGGGTGGCACAGTCGCTTTTaGTTAAATGGATCCCAAATA +
Preference number: 5 (lower is better)
Translates to: HRYVSGHLQPLALEQPIGWHSRF*LNGSQI
Trigger: TATTTGGGATCCATTTAACAAAAAGCGACTGTGCCA...CCCTATCGGCTGTTCCAGAGCGAGAGGCTGCAGGTGTCCACTTACGTACCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR CAA 90 bp TGTGAAGACCAAAGGTTGGCCAAGGTCTTGAAAACAAAATGTGGCCACGTTGTGAGGCAGGAGAATTGCTaGAACCCGAGAGGCGGAGCT +
Preference number: 5 (lower is better)
Translates to: CEDQRLAKVLKTKCGHVVRQENC*NPRGGA
Trigger: AGCTCCGCCTCTCGGGTTCAAGCAATTCTCCTGCCT...CACAACGTGGCCACATTTTGTTTTCAAGACCTTGGCCAACCTTTGGTCTTCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR CAA 90 bp AGGATGACTTCTAAGTATAGCTATGGGCATCCCCCTCAAAGTGGACACCATGCACATAACCCTGCTTGTTaGGAAACGCTCGTATGCAGC +
Preference number: 5 (lower is better)
Translates to: RMTSKYSYGHPPQSGHHAHNPAC*ETLVCS
Trigger: GCTGCATACGAGCGTTTCCAAACAAGCAGGGTTATG...TGCATGGTGTCCACTTTGAGGGGGATGCCCATAGCTATACTTAGAAGTCATCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR CAA 90 bp ACAAAATGTGGCCACGTTGTGGTATCACAGCATCTGTCACAGTGTTTTGAGCCCATGGAAAAGGGGGCCTaGAACAGGACTTTGCAGGAT +
Preference number: 5 (lower is better)
Translates to: TKCGHVVVSQHLSQCFEPMEKGA*NRTLQD
Trigger: ATCCTGCAAAGTCCTGTTCAAGGCCCCCTTTTCCAT...GGGCTCAAAACACTGTGACAGATGCTGTGATACCACAACGTGGCCACATTTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR CAA 90 bp AACAAATGGCTCACGAGCCTTTTCCTCTACCATTTAAGGTCCAGAAAGAATGCATGCAGGCTGTGTGGCTaGTGCAAGTCACACCATCCC +
Preference number: 5 (lower is better)
Translates to: NKWLTSLFLYHLRSRKNACRLCG*CKSHHP
Trigger: GGGATGGTGTGACTTGCACAAGCCACACAGCCTGCA...TGCATTCTTTCTGGACCTTAAATGGTAGAGGAAAAGGCTCGTGAGCCATTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR CAA 90 bp AACAAATGGCTCACGAGCCTTTTCCTCTACCATTTAAGGTCCAGAAAGAATGCAGGCAGGGAGGCACACTaGATTTCCAGAGACAAGAGG +
Preference number: 5 (lower is better)
Translates to: NKWLTSLFLYHLRSRKNAGREAH*ISRDKR
Trigger: CCTCTTGTCTCTGGAAATCAAGTGTGCCTCCCTGCC...TGCATTCTTTCTGGACCTTAAATGGTAGAGGAAAAGGCTCGTGAGCCATTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR CAA 90 bp ACAAAATGTGGCCACGTTGTGGTATCACAGCATCTGTCACAGTGTTTTGAGCCCAGGTTGGCCAAGGTCTaGAAAACAAAATGTGGCCAC +
Preference number: 5 (lower is better)
Translates to: TKCGHVVVSQHLSQCFEPRLAKV*KTKCGH
Trigger: GTGGCCACATTTTGTTTTCAAGACCTTGGCCAACCT...GGGCTCAAAACACTGTGACAGATGCTGTGATACCACAACGTGGCCACATTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR CAA 90 bp ACAAAATGTGGCCACGTTGTGGTATCACAGCATCTGTCACAGTGTTTTGAGCCCGAATTTCTGCCCACATaGCTTTTCCTAGTGCCCAGA +
Preference number: 5 (lower is better)
Translates to: TKCGHVVVSQHLSQCFEPEFLPT*LFLVPR
Trigger: TCTGGGCACTAGGAAAAGCAATGTGGGCAGAAATTC...GGGCTCAAAACACTGTGACAGATGCTGTGATACCACAACGTGGCCACATTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR CAA 90 bp AACAAATGGCTCACGAGCCTTTTCCTCTACCATTTAAGGTCCAGAAAGAATGCATTAGAACCGGTCATCTaGGGCTCCCCTCAGAAGCAA +
Preference number: 5 (lower is better)
Translates to: NKWLTSLFLYHLRSRKNALEPVI*GSPQKQ
Trigger: TTGCTTCTGAGGGGAGCCCAAGATGACCGGTTCTAA...TGCATTCTTTCTGGACCTTAAATGGTAGAGGAAAAGGCTCGTGAGCCATTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR CAA 90 bp TTGCTGTCACTTCCCATCCCATCCACTTATTTATATTCCCAACAAAGGTTAGTCGGTGGCTGGTTCAGCTaGAACTCGTTAGAACCGGTC +
Preference number: 5 (lower is better)
Translates to: LLSLPIPSTYLYSQQRLVGGWFS*NSLEPV
Trigger: GACCGGTTCTAACGAGTTCAAGCTGAACCAGCCACC...GACTAACCTTTGTTGGGAATATAAATAAGTGGATGGGATGGGAAGTGACAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS CCA 90 bp GCTCGTGGGGTACCGATGGAATTGGCACAGTCGCTTTTTGTTAAATaGATCCCAAATATTTACAAAGCCATCAGAACCACCTGTGGCAAA +
Preference number: 5 (lower is better)
Translates to: ARGVPMELAQSLFVK*IPNIYKAIRTTCGK
Trigger: TTTGCCACAGGTGGTTCTGATGGCTTTGTAAATATTTGGGATCCATTTAACAAAAAGCGACTGTGCCAATTCCATCGGTACCCCACGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000368858.9
ENST00000368865.9
ENST00000407911.2
ENST00000481952.1
CDS-3UTR CAA 90 bp ACAAAATGTGGCCACGTTGTGGTATCACAGCATCTGTCACAGTGTTTTGAGCCCCAAGTACATGGTGACTaGGGTTTTGTTTCTGCATCT +
Preference number: 5 (lower is better)
Translates to: TKCGHVVVSQHLSQCFEPQVHGD*GFVSAS
Trigger: AGATGCAGAAACAAAACCCAAGTCACCATGTACTTG...GGGCTCAAAACACTGTGACAGATGCTGTGATACCACAACGTGGCCACATTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR CAA 90 bp GATACATCGCATGCAAGAAGGGCAAGTCATATTTCAGGATCCTTCTGTCATGTAGACTTAAGGCAGAAATaGGAGGCTGCCACATTCACC +
Preference number: 5 (lower is better)
Translates to: DTSHARRASHISGSFCHVDLRQK*EAATFT
Trigger: GGTGAATGTGGCAGCCTCCAATTTCTGCCTTAAGTC...TACATGACAGAAGGATCCTGAAATATGACTTGCCCTTCTTGCATGCGATGTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR CAA 90 bp AGGATGACTTCTAAGTATAGCTATGGGCATCCCCCTCAAAGTGGACACCATGCACTGATCAAGCAGTTTTaGCAAATTACAGGTGACAGG +
Preference number: 5 (lower is better)
Translates to: RMTSKYSYGHPPQSGHHALIKQF*QITGDR
Trigger: CCTGTCACCTGTAATTTGCAAAAACTGCTTGATCAG...TGCATGGTGTCCACTTTGAGGGGGATGCCCATAGCTATACTTAGAAGTCATCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR CAA 90 bp CAGATACATCGCATGCAAGAAGGGCAAGTCATATTTCAGGATCCTTCTGTCATGACTCAGAACCAGATATaGCTGTCACTTCCCATCCCA +
Preference number: 5 (lower is better)
Translates to: QIHRMQEGQVIFQDPSVMTQNQI*LSLPIP
Trigger: TGGGATGGGAAGTGACAGCAATATCTGGTTCTGAGT...CATGACAGAAGGATCCTGAAATATGACTTGCCCTTCTTGCATGCGATGTATCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR CAA 90 bp TGTGAAGACCAAAGGTTGGCCAAGGTCTTGAAAACAAAATGTGGCCACGTTGTGGGTGCAAATTTGAAGTaGCCATTTTCCCTCCATGTC +
Preference number: 5 (lower is better)
Translates to: CEDQRLAKVLKTKCGHVVGANLK*PFSLHV
Trigger: GACATGGAGGGAAAATGGCAACTTCAAATTTGCACC...CACAACGTGGCCACATTTTGTTTTCAAGACCTTGGCCAACCTTTGGTCTTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR CAA 90 bp CAGATACATCGCATGCAAGAAGGGCAAGTCATATTTCAGGATCCTTCTGTCATGCCTGCATTAGCCACTTaGGTGATCTTAGACTTCAAG +
Preference number: 5 (lower is better)
Translates to: QIHRMQEGQVIFQDPSVMPALAT*VILDFK
Trigger: CTTGAAGTCTAAGATCACCAAAGTGGCTAATGCAGG...CATGACAGAAGGATCCTGAAATATGACTTGCCCTTCTTGCATGCGATGTATCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR CAA 90 bp GATACATCGCATGCAAGAAGGGCAAGTCATATTTCAGGATCCTTCTGTCATGTACAAAACTGCAGTCACTaGCCCTCCAATTTTGTTTGC +
Preference number: 5 (lower is better)
Translates to: DTSHARRASHISGSFCHVQNCSH*PSNFVC
Trigger: GCAAACAAAATTGGAGGGCAAGTGACTGCAGTTTTG...TACATGACAGAAGGATCCTGAAATATGACTTGCCCTTCTTGCATGCGATGTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR CAA 90 bp TTGCTGTCACTTCCCATCCCATCCACTTATTTATATTCCCAACAAAGGTTAGTCCAAAATGTGGCCACGTaGTGGTATCACAGCATCTGT +
Preference number: 5 (lower is better)
Translates to: LLSLPIPSTYLYSQQRLVQNVAT*WYHSIC
Trigger: ACAGATGCTGTGATACCACAACGTGGCCACATTTTG...GACTAACCTTTGTTGGGAATATAAATAAGTGGATGGGATGGGAAGTGACAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR CAA 90 bp AACAAATGGCTCACGAGCCTTTTCCTCTACCATTTAAGGTCCAGAAAGAATGCAACTGACTCAAACAATTaGCCCTTCTGGGATCAATTG +
Preference number: 5 (lower is better)
Translates to: NKWLTSLFLYHLRSRKNATDSNN*PFWDQL
Trigger: CAATTGATCCCAGAAGGGCAAATTGTTTGAGTCAGT...TGCATTCTTTCTGGACCTTAAATGGTAGAGGAAAAGGCTCGTGAGCCATTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR CAA 90 bp TTGCTGTCACTTCCCATCCCATCCACTTATTTATATTCCCAACAAAGGTTAGTCAACCTTAACCTCGCTTaGTTTAACAGCCCAGGAAAT +
Preference number: 5 (lower is better)
Translates to: LLSLPIPSTYLYSQQRLVNLNLA*FNSPGN
Trigger: ATTTCCTGGGCTGTTAAACAAAGCGAGGTTAAGGTT...GACTAACCTTTGTTGGGAATATAAATAAGTGGATGGGATGGGAAGTGACAGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS CCA 90 bp AATTTTATCCATCAGACGTCTATCAACCTACGGATATTGAAAGCTTaGGAGAACATGATAACATCAACTCCAACCCTACAGTCAGCTGTA +
Preference number: 5 (lower is better)
Translates to: NFIHQTSINLRILKA*ENMITSTPTLQSAV
Trigger: TACAGCTGACTGTAGGGTTGGAGTTGATGTTATCATGTTCTCCCAAGCTTTCAATATCCGTAGGTTGATAGACGTCTGATGGATAAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481952.1
CDS-3UTR CAA 90 bp GATACATCGCATGCAAGAAGGGCAAGTCATATTTCAGGATCCTTCTGTCATGTAAAAACAATGAAGGGTTaGAATGCTAAGGCTAAACTG +
Preference number: 5 (lower is better)
Translates to: DTSHARRASHISGSFCHVKTMKG*NAKAKL
Trigger: CAGTTTAGCCTTAGCATTCAAACCCTTCATTGTTTT...TACATGACAGAAGGATCCTGAAATATGACTTGCCCTTCTTGCATGCGATGTATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR CAA 90 bp GATACATCGCATGCAAGAAGGGCAAGTCATATTTCAGGATCCTTCTGTCATGTATGTTTCATACGTGTTTaGAGAAAGGGCACACTTATT +
Preference number: 5 (lower is better)
Translates to: DTSHARRASHISGSFCHVCFIRV*RKGTLI
Trigger: AATAAGTGTGCCCTTTCTCAAAACACGTATGAAACA...TACATGACAGAAGGATCCTGAAATATGACTTGCCCTTCTTGCATGCGATGTATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR CAA 90 bp ACTCAGAACCAGATATTGCTGTCACTTCCCATCCCATCCACTTATTTATATTCCCCCAACAAGATTTTCTaGATCAGTGTTCAAATCATG +
Preference number: 5 (lower is better)
Translates to: TQNQILLSLPIPSTYLYSPNKIF*ISVQIM
Trigger: CATGATTTGAACACTGATCAAGAAAATCTTGTTGGG...GGAATATAAATAAGTGGATGGGATGGGAAGTGACAGCAATATCTGGTTCTGAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS-3UTR CAA 90 bp TTTCCTGGTCCACACTGGAAGAATTGTCTTGAGCTACACATAAAATACACTAATGTTTATGAATTTGTTTaGGGCCACCTTCAAAGCCAT +
Preference number: 5 (lower is better)
Translates to: FPGPHWKNCLELHIKYTNVYEFV*GHLQSH
Trigger: ATGGCTTTGAAGGTGGCCCAAAACAAATTCATAAAC...ATTAGTGTATTTTATGTGTAGCTCAAGACAATTCTTCCAGTGTGGACCAGGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368865.9
CDS GCA 72 bp GGCTGGTTCAGCTTGAACTCGTTAGAACCGGTCATCTaGAGAACAGGCGCCCAGAGTCCCCAGGGGTCCCGC +
Preference number: 6 (lower is better)
Translates to: GWFSLNSLEPVI*RTGAQSPQGSR
Trigger: GCGGGACCCCTGGGGACTCTGGGCGCCTGTTCTGCAGATGACCGGTTCTAACGAGTTCAAGCTGAACCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407911.2
CDS TCA 72 bp TCCTGGGTTGAATGCAAGAAAAGGCTCAAATACAGGTaGAGCATACTCACTTGGGTTTTGTTTCTGCATCTG +
Preference number: 6 (lower is better)
Translates to: SWVECKKRLKYR*SILTWVLFLHL
Trigger: CAGATGCAGAAACAAAACCCAAGTGAGTATGCTTCACCTGTATTTGAGCCTTTTCTTGCATTCAACCCAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481952.1
CDS CCA 72 bp CATCAGACGTCTATCAACCTACGGATATTGAAAGCTTaGGAGAACATGATAACATCAACTCCAACCCTACAG +
Preference number: 6 (lower is better)
Translates to: HQTSINLRILKA*ENMITSTPTLQ
Trigger: CTGTAGGGTTGGAGTTGATGTTATCATGTTCTCCCAAGCTTTCAATATCCGTAGGTTGATAGACGTCTGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481952.1
CDS CCA 72 bp GTACCGATGGAATTGGCACAGTCGCTTTTTGTTAAATaGATCCCAAATATTTACAAAGCCATCAGAACCACC +
Preference number: 6 (lower is better)
Translates to: VPMELAQSLFVK*IPNIYKAIRTT
Trigger: GGTGGTTCTGATGGCTTTGTAAATATTTGGGATCCATTTAACAAAAAGCGACTGTGCCAATTCCATCGGTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000368858.9
ENST00000368865.9
ENST00000407911.2
ENST00000481952.1
CDS CAA 90 bp CAATTTTATCCATCAGACGTCTATCAACCTACGGATATTGAAAGCTaGGGAGAACATGATAACATCAACTCCAACCCTACAGTCAGCTGT +
Preference number: 6 (lower is better)
Translates to: QFYPSDVYQPTDIES*GEHDNINSNPTVSC
Trigger: ACAGCTGACTGTAGGGTTGGAGTTGATGTTATCATGTTCTCCCAAGCTTTCAATATCCGTAGGTTGATAGACGTCTGATGGATAAAATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481952.1