Pregenerated sensors for BTC (Homo sapiens)
Ensembl gene IDs: ENSG00000174808Ensembl transcript IDs: ENST00000395743.8, ENST00000512743.1
Found 87 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGTCTACTAGCTGTTTTCCTGAGACACATTCTGTCCATTTTCAAATaGGCAAGGCACTTTGCAGCTTGCCACCAACCTGGAGGTAACTTC | + |
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Preference number: 1 (lower is better) Translates to: CLLAVFLRHILSIFK*ARHFAACHQPGGNF Trigger: GAAGTTACCTCCAGGTTGGTGGCAAGCTGCAAAGTGCCTTGCTCATTTGAAAATGGACAGAATGTGTCTCAGGAAAACAGCTAGTAGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000395743.8 ENST00000512743.1 |
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| 3UTR TCA 90 bp | ATATGGTCACAACCGGTCCCTACCTGGTCTCTCCAGTGTTGTCACTaGCCATTACTCCCATATAAACAGCCTCTTTCAGTAATATTATTT | + |
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Preference number: 1 (lower is better) Translates to: IWSQPVPTWSLQCCH*PLLPYKQPLSVILF Trigger: AAATAATATTACTGAAAGAGGCTGTTTATATGGGAGTAATGGTCAGTGACAACACTGGAGAGACCAGGTAGGGACCGGTTGTGACCATAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395743.8 |
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| 3UTR CCA 90 bp | TATGTATCATATGTAAGTACAGCCCCAGCTTCACTCAAAACACCATaGATGCTAGAAGGTAATATGCGATTTCAGCATTTGTCTGAATTC | + |
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Preference number: 1 (lower is better) Translates to: YVSYVSTAPASLKTP*MLEGNMRFQHLSEF Trigger: GAATTCAGACAAATGCTGAAATCGCATATTACCTTCTAGCATCCATGGTGTTTTGAGTGAAGCTGGGGCTGTACTTACATATGATACATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000395743.8 |
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| 3UTR-3UTR GCA 90 bp | AAAACACCATGGATGCTAGAAGGTAATATGCGATTTCAGCATTTGTCTGAATTCAGGCACTTTGCAGCTTaGCACCAACCTGGAGGTAAC | + |
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Preference number: 2 (lower is better) Translates to: KTPWMLEGNMRFQHLSEFRHFAA*HQPGGN Trigger: GTTACCTCCAGGTTGGTGGCAAGCTGCAAAGTGCCT...GAATTCAGACAAATGCTGAAATCGCATATTACCTTCTAGCATCCATGGTGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395743.8 |
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| 3UTR CAA 90 bp | TATAGGCCAGGATTTCTCATTCTGTGTGCCTGTGGGAAGACGGTCTaGACATCTCACAATCATACCAAAACACAGTTCAGTATAAAACCT | + |
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Preference number: 2 (lower is better) Translates to: YRPGFLILCACGKTV*TSHNHTKTQFSIKP Trigger: AGGTTTTATACTGAACTGTGTTTTGGTATGATTGTGAGATGTCAAGACCGTCTTCCCACAGGCACACAGAATGAGAAATCCTGGCCTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000395743.8 |
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| 3UTR-3UTR CCA 90 bp | ATATTTATTCCAAGCTCCTTTCGTATCGAAGAAGACTACATAAGAGAAAGGGCACATTCTGTGTGCCTGTaGGAAGACGGTCTTGACATC | + |
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Preference number: 2 (lower is better) Translates to: IFIPSSFRIEEDYIRERAHSVCL*EDGLDI Trigger: GATGTCAAGACCGTCTTCCCACAGGCACACAGAATG...TGCCCTTTCTCTTATGTAGTCTTCTTCGATACGAAAGGAGCTTGGAATAAATAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395743.8 |
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| 3UTR-3UTR GCA 90 bp | GATATTTATTCCAAGCTCCTTTCGTATCGAAGAAGACTACATAAGAGAAAGGGCATTTCTCATTCTGTGTaGCTGTGGGAAGACGGTCTT | + |
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Preference number: 2 (lower is better) Translates to: DIYSKLLSYRRRLHKRKGISHSV*LWEDGL Trigger: AAGACCGTCTTCCCACAGGCACACAGAATGAGAAAT...GCCCTTTCTCTTATGTAGTCTTCTTCGATACGAAAGGAGCTTGGAATAAATATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395743.8 |
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| 3UTR-3UTR TCA 90 bp | TATTCCAAGCTCCTTTCGTATCGAAGAAGACTACATAAGAGAAAGGGCATGAATCATCAAGAACATAAATaGGGATATGGTCACAACCGG | + |
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Preference number: 2 (lower is better) Translates to: YSKLLSYRRRLHKRKGMNHQEHK*GYGHNR Trigger: CCGGTTGTGACCATATCCTCATTTATGTTCTTGATG...ATTCATGCCCTTTCTCTTATGTAGTCTTCTTCGATACGAAAGGAGCTTGGAATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395743.8 |
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| 3UTR-3UTR GCA 90 bp | TATTCCAAGCTCCTTTCGTATCGAAGAAGACTACATAAGAGAAAGGGCATGAATCCAGGGCTTAAGGAATaGCAAGCATTTACTTTTCCA | + |
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Preference number: 2 (lower is better) Translates to: YSKLLSYRRRLHKRKGMNPGLKE*QAFTFP Trigger: TGGAAAAGTAAATGCTTGGCATTCCTTAAGCCCTGG...ATTCATGCCCTTTCTCTTATGTAGTCTTCTTCGATACGAAAGGAGCTTGGAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395743.8 |
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| 3UTR-3UTR TCA 90 bp | ATATTTATTCCAAGCTCCTTTCGTATCGAAGAAGACTACATAAGAGAAAGGGCACTCCAGTGTTGTCACTaGCCATTACTCCCATATAAA | + |
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Preference number: 2 (lower is better) Translates to: IFIPSSFRIEEDYIRERALQCCH*PLLPYK Trigger: TTTATATGGGAGTAATGGTCAGTGACAACACTGGAG...TGCCCTTTCTCTTATGTAGTCTTCTTCGATACGAAAGGAGCTTGGAATAAATAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395743.8 |
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| 3UTR-3UTR CCA 90 bp | ATATTTATTCCAAGCTCCTTTCGTATCGAAGAAGACTACATAAGAGAAAGGGCAGAGCACTTGGCAAGATaGTCCCAAGTAATAGATGTT | + |
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Preference number: 2 (lower is better) Translates to: IFIPSSFRIEEDYIRERAEHLAR*SQVIDV Trigger: AACATCTATTACTTGGGACCATCTTGCCAAGTGCTC...TGCCCTTTCTCTTATGTAGTCTTCTTCGATACGAAAGGAGCTTGGAATAAATAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395743.8 |
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| 3UTR CAA 90 bp | CTCAAAACACCATGGATGCTAGAAGGTAATATGCGATTTCAGCATTaGTCTGAATTCTCCACTTCACTATGGAATCTACATTGCAAAGTA | + |
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Preference number: 2 (lower is better) Translates to: LKTPWMLEGNMRFQH*SEFSTSLWNLHCKV Trigger: TACTTTGCAATGTAGATTCCATAGTGAAGTGGAGAATTCAGACAAATGCTGAAATCGCATATTACCTTCTAGCATCCATGGTGTTTTGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395743.8 |
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| 3UTR-3UTR TCA 90 bp | AAAACACCATGGATGCTAGAAGGTAATATGCGATTTCAGCATTTGTCTGAATTCTTAGATTATTTGACTTaGCTTCTTTGGCCCTGTTTC | + |
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Preference number: 2 (lower is better) Translates to: KTPWMLEGNMRFQHLSEFLDYLT*LLWPCF Trigger: GAAACAGGGCCAAAGAAGTCAAGTCAAATAATCTAA...GAATTCAGACAAATGCTGAAATCGCATATTACCTTCTAGCATCCATGGTGTTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395743.8 |
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| 3UTR-3UTR TCA 90 bp | ATATTTATTCCAAGCTCCTTTCGTATCGAAGAAGACTACATAAGAGAAAGGGCAATTTCAGCATTTGTCTaGATTCTCCACTTCACTATG | + |
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Preference number: 2 (lower is better) Translates to: IFIPSSFRIEEDYIRERAISAFV*ILHFTM Trigger: CATAGTGAAGTGGAGAATTCAGACAAATGCTGAAAT...TGCCCTTTCTCTTATGTAGTCTTCTTCGATACGAAAGGAGCTTGGAATAAATAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395743.8 |
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| 3UTR TCA 72 bp | GCTGTTTTCCTGAGACACATTCTGTCCATTTTCAAATaGGCAAGGCACTTTGCAGCTTGCCACCAACCTGGA | + |
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Preference number: 3 (lower is better) Translates to: AVFLRHILSIFK*ARHFAACHQPG Trigger: TCCAGGTTGGTGGCAAGCTGCAAAGTGCCTTGCTCATTTGAAAATGGACAGAATGTGTCTCAGGAAAACAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000395743.8 ENST00000512743.1 |
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| 3UTR-3UTR CAA 90 bp | TATTCCAAGCTCCTTTCGTATCGAAGAAGACTACATAAGAGAAAGGGCATGAATCTGGTCTCTCCAGTGTaGTCACTGACCATTACTCCC | + |
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Preference number: 3 (lower is better) Translates to: YSKLLSYRRRLHKRKGMNLVSPV*SLTITP Trigger: GGGAGTAATGGTCAGTGACAACACTGGAGAGACCAG...ATTCATGCCCTTTCTCTTATGTAGTCTTCTTCGATACGAAAGGAGCTTGGAATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395743.8 |
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| 3UTR TCA 72 bp | GATTTCTCATTCTGTGTGCCTGTGGGAAGACGGTCTTaGCATCTCACAATCATACCAAAACACAGTTCAGTA | + |
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Preference number: 3 (lower is better) Translates to: DFSFCVPVGRRS*HLTIIPKHSSV Trigger: TACTGAACTGTGTTTTGGTATGATTGTGAGATGTCAAGACCGTCTTCCCACAGGCACACAGAATGAGAAATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395743.8 |
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| 3UTR-3UTR CAA 90 bp | ATATTTATTCCAAGCTCCTTTCGTATCGAAGAAGACTACATAAGAGAAAGGGCAGGAGTAAAGGAGCACTaGGCAAGATGGTCCCAAGTA | + |
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Preference number: 3 (lower is better) Translates to: IFIPSSFRIEEDYIRERAGVKEH*ARWSQV Trigger: TACTTGGGACCATCTTGCCAAGTGCTCCTTTACTCC...TGCCCTTTCTCTTATGTAGTCTTCTTCGATACGAAAGGAGCTTGGAATAAATAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395743.8 |
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| 3UTR-3UTR CAA 90 bp | ATATTTATTCCAAGCTCCTTTCGTATCGAAGAAGACTACATAAGAGAAAGGGCAGAAATTTCCCTTCTGTaGTTGCTACCTAACCAGTTG | + |
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Preference number: 3 (lower is better) Translates to: IFIPSSFRIEEDYIRERAEISLL*LLPNQL Trigger: CAACTGGTTAGGTAGCAACAACAGAAGGGAAATTTC...TGCCCTTTCTCTTATGTAGTCTTCTTCGATACGAAAGGAGCTTGGAATAAATAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395743.8 |
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| 3UTR-3UTR CAA 90 bp | GATATTTATTCCAAGCTCCTTTCGTATCGAAGAAGACTACATAAGAGAAAGGGCTTTGACTTGACTTCTTaGGCCCTGTTTCCATATGTA | + |
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Preference number: 3 (lower is better) Translates to: DIYSKLLSYRRRLHKRKGFDLTS*ALFPYV Trigger: TACATATGGAAACAGGGCCAAAGAAGTCAAGTCAAA...GCCCTTTCTCTTATGTAGTCTTCTTCGATACGAAAGGAGCTTGGAATAAATATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395743.8 |
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| 3UTR-3UTR CAA 90 bp | TATTCCAAGCTCCTTTCGTATCGAAGAAGACTACATAAGAGAAAGGGCATGAATATGCGATTTCAGCATTaGTCTGAATTCTCCACTTCA | + |
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Preference number: 3 (lower is better) Translates to: YSKLLSYRRRLHKRKGMNMRFQH*SEFSTS Trigger: TGAAGTGGAGAATTCAGACAAATGCTGAAATCGCAT...ATTCATGCCCTTTCTCTTATGTAGTCTTCTTCGATACGAAAGGAGCTTGGAATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395743.8 |
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| CDS-3UTR GCA 90 bp | ACACATTCTGTCCATTTTCAAATGAGCAAGGCACTTTGCAGCTTGCCACCAACCCCATCAACCCCGCTCTaGCGGGCCGGGCAGCCCCTA | + |
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Preference number: 4 (lower is better) Translates to: THSVHFQMSKALCSLPPTPSTPL*RAGQPL Trigger: TAGGGGCTGCCCGGCCCGGCAGAGCGGGGTTGATGG...GGTTGGTGGCAAGCTGCAAAGTGCCTTGCTCATTTGAAAATGGACAGAATGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000395743.8 |
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| CDS-3UTR TCA 90 bp | TATTCCAAGCTCCTTTCGTATCGAAGAAGACTACATAAGAGAAAGGGCATGAATCGGGCCTCGGGCGCCTaGGAGGGTGCCTGGAAACTA | + |
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Preference number: 4 (lower is better) Translates to: YSKLLSYRRRLHKRKGMNRASGA*EGAWKL Trigger: TAGTTTCCAGGCACCCTCTCAGGCGCCCGAGGCCCG...ATTCATGCCCTTTCTCTTATGTAGTCTTCTTCGATACGAAAGGAGCTTGGAATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395743.8 |
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| CDS-3UTR TCA 90 bp | TGTCCATTTTCAAATGAGCAAGGCACTTTGCAGCTTGCCACCAACCTGGAGGTAGTGGCCTTTCCGCTTTaGTTGTGTGGTGGTAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: CPFSNEQGTLQLATNLEVVAFPL*LCGGSC Trigger: GCAGCTACCACCACACAATCAAAGCGGAAAGGCCAC...TACCTCCAGGTTGGTGGCAAGCTGCAAAGTGCCTTGCTCATTTGAAAATGGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000395743.8 ENST00000512743.1 |
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| CDS-3UTR CCA 90 bp | TGTCCATTTTCAAATGAGCAAGGCACTTTGCAGCTTGCCACCAACCTGGAGGTAAACTACTTCCCAGGCTaGCACCCTGGCTACAAGGCA | + |
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Preference number: 4 (lower is better) Translates to: CPFSNEQGTLQLATNLEVNYFPG*HPGYKA Trigger: TGCCTTGTAGCCAGGGTGCCAGCCTGGGAAGTAGTT...TACCTCCAGGTTGGTGGCAAGCTGCAAAGTGCCTTGCTCATTTGAAAATGGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395743.8 |
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| CDS-3UTR CCA 90 bp | TGTCCATTTTCAAATGAGCAAGGCACTTTGCAGCTTGCCACCAACCTGGAGGTACAACCGGTCCCTACCTaGTCTCTCCAGTGTTGTCAC | + |
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Preference number: 4 (lower is better) Translates to: CPFSNEQGTLQLATNLEVQPVPT*SLQCCH Trigger: GTGACAACACTGGAGAGACCAGGTAGGGACCGGTTG...TACCTCCAGGTTGGTGGCAAGCTGCAAAGTGCCTTGCTCATTTGAAAATGGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395743.8 |
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| CDS-3UTR GCA 90 bp | TATTCCAAGCTCCTTTCGTATCGAAGAAGACTACATAAGAGAAAGGGCATGAATACACAGGAGGGCGTCTaGTCGGCCACCACGAAGCGG | + |
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Preference number: 4 (lower is better) Translates to: YSKLLSYRRRLHKRKGMNTQEGV*SATTKR Trigger: CCGCTTCGTGGTGGCCGAGCAGACGCCCTCCTGTGT...ATTCATGCCCTTTCTCTTATGTAGTCTTCTTCGATACGAAAGGAGCTTGGAATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395743.8 |
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| CDS-3UTR GCA 90 bp | TGTCCATTTTCAAATGAGCAAGGCACTTTGCAGCTTGCCACCAACCTGGAGGTAATGAGCAAGGCACTTTaGAGCTTGCCACCAACCTGG | + |
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Preference number: 4 (lower is better) Translates to: CPFSNEQGTLQLATNLEVMSKAL*SLPPTW Trigger: CCAGGTTGGTGGCAAGCTGCAAAGTGCCTTGCTCAT...TACCTCCAGGTTGGTGGCAAGCTGCAAAGTGCCTTGCTCATTTGAAAATGGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000395743.8 ENST00000512743.1 |
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| CDS-3UTR CCA 90 bp | CCTGAGACACATTCTGTCCATTTTCAAATGAGCAAGGCACTTTGCAGCTTGCCACCGACAGGCACAAGTTaGGGGGCATCTTCCATCGAT | + |
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Preference number: 4 (lower is better) Translates to: PETHSVHFQMSKALCSLPPTGTS*GASSID Trigger: ATCGATGGAAGATGCCCCCCAACTTGTGCCTGTCGG...TGGCAAGCTGCAAAGTGCCTTGCTCATTTGAAAATGGACAGAATGTGTCTCAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000395743.8 |
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| CDS-3UTR GCA 90 bp | TGTCCATTTTCAAATGAGCAAGGCACTTTGCAGCTTGCCACCAACCTGGAGGTAGGTGGAATTCCCATCTaGCACCACACAGTGAAGGAT | + |
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Preference number: 4 (lower is better) Translates to: CPFSNEQGTLQLATNLEVGGIPI*HHTVKD Trigger: ATCCTTCACTGTGTGGTGGCAGATGGGAATTCCACC...TACCTCCAGGTTGGTGGCAAGCTGCAAAGTGCCTTGCTCATTTGAAAATGGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000395743.8 ENST00000512743.1 |
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| CDS-3UTR GCA 90 bp | ACACATTCTGTCCATTTTCAAATGAGCAAGGCACTTTGCAGCTTGCCACCAACCAGGCACTTTGCAGCTTaGCACCAACCTGGAGGTAAC | + |
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Preference number: 4 (lower is better) Translates to: THSVHFQMSKALCSLPPTRHFAA*HQPGGN Trigger: GTTACCTCCAGGTTGGTGGCAAGCTGCAAAGTGCCT...GGTTGGTGGCAAGCTGCAAAGTGCCTTGCTCATTTGAAAATGGACAGAATGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000395743.8 ENST00000512743.1 |
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| CDS-3UTR GCA 90 bp | ACACATTCTGTCCATTTTCAAATGAGCAAGGCACTTTGCAGCTTGCCACCAACCATGAGCAAGGCACTTTaGAGCTTGCCACCAACCTGG | + |
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Preference number: 4 (lower is better) Translates to: THSVHFQMSKALCSLPPTMSKAL*SLPPTW Trigger: CCAGGTTGGTGGCAAGCTGCAAAGTGCCTTGCTCAT...GGTTGGTGGCAAGCTGCAAAGTGCCTTGCTCATTTGAAAATGGACAGAATGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000395743.8 ENST00000512743.1 |
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| CDS-3UTR GCA 90 bp | TATTCCAAGCTCCTTTCGTATCGAAGAAGACTACATAAGAGAAAGGGCATGAATGGGCGCCTGAGAGGGTaGCTGGAAACTAATCCCGGA | + |
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Preference number: 4 (lower is better) Translates to: YSKLLSYRRRLHKRKGMNGRLRG*LETNPG Trigger: TCCGGGATTAGTTTCCAGGCACCCTCTCAGGCGCCC...ATTCATGCCCTTTCTCTTATGTAGTCTTCTTCGATACGAAAGGAGCTTGGAATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395743.8 |
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| CDS-3UTR CCA 90 bp | TGTCCATTTTCAAATGAGCAAGGCACTTTGCAGCTTGCCACCAACCTGGAGGTATTTCAGGACTTCTGGTaGAATTCCCATCTGCCACCA | + |
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Preference number: 4 (lower is better) Translates to: CPFSNEQGTLQLATNLEVFQDFW*NSHLPP Trigger: TGGTGGCAGATGGGAATTCCACCAGAAGTCCTGAAA...TACCTCCAGGTTGGTGGCAAGCTGCAAAGTGCCTTGCTCATTTGAAAATGGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000395743.8 ENST00000512743.1 |
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| CDS-3UTR CCA 90 bp | CCTGAGACACATTCTGTCCATTTTCAAATGAGCAAGGCACTTTGCAGCTTGCCAGGGCACCTAGAGAAGTaGCCTTTCCGCTTTGATTGT | + |
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Preference number: 4 (lower is better) Translates to: PETHSVHFQMSKALCSLPGHLEK*PFRFDC Trigger: ACAATCAAAGCGGAAAGGCCACTTCTCTAGGTGCCC...TGGCAAGCTGCAAAGTGCCTTGCTCATTTGAAAATGGACAGAATGTGTCTCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000395743.8 ENST00000512743.1 |
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| CDS-3UTR CCA 90 bp | CCTGAGACACATTCTGTCCATTTTCAAATGAGCAAGGCACTTTGCAGCTTGCCACATTCTGTGTGCCTGTaGGAAGACGGTCTTGACATC | + |
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Preference number: 4 (lower is better) Translates to: PETHSVHFQMSKALCSLPHSVCL*EDGLDI Trigger: GATGTCAAGACCGTCTTCCCACAGGCACACAGAATG...TGGCAAGCTGCAAAGTGCCTTGCTCATTTGAAAATGGACAGAATGTGTCTCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395743.8 |
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| CDS-3UTR CCA 90 bp | AATGAGGATATGGTCACAACCGGTCCCTACCTGGTCTCTCCAGTGTTGTCACTGCTTGAGAGATTTTGTTaGTCAGCCAAACTCAGTCCA | + |
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Preference number: 4 (lower is better) Translates to: NEDMVTTGPYLVSPVLSLLERFC*SAKLSP Trigger: TGGACTGAGTTTGGCTGACCAACAAAATCTCTCAAG...CAGTGACAACACTGGAGAGACCAGGTAGGGACCGGTTGTGACCATATCCTCATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395743.8 |
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| CDS-3UTR TCA 90 bp | TGTCCATTTTCAAATGAGCAAGGCACTTTGCAGCTTGCCACCAACCTGGAGGTAAGCGGCATCTCCCTTTaGTGCAGTAATGCTTGTATT | + |
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Preference number: 4 (lower is better) Translates to: CPFSNEQGTLQLATNLEVSGISL*CSNACI Trigger: AATACAAGCATTACTGCATCAAAGGGAGATGCCGCT...TACCTCCAGGTTGGTGGCAAGCTGCAAAGTGCCTTGCTCATTTGAAAATGGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000395743.8 ENST00000512743.1 |
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| CDS-3UTR GCA 90 bp | TGTCCATTTTCAAATGAGCAAGGCACTTTGCAGCTTGCCACCAACCTGGAGGTAATTTCTCATTCTGTGTaGCTGTGGGAAGACGGTCTT | + |
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Preference number: 4 (lower is better) Translates to: CPFSNEQGTLQLATNLEVISHSV*LWEDGL Trigger: AAGACCGTCTTCCCACAGGCACACAGAATGAGAAAT...TACCTCCAGGTTGGTGGCAAGCTGCAAAGTGCCTTGCTCATTTGAAAATGGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395743.8 |
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| CDS-3UTR CCA 90 bp | ACACATTCTGTCCATTTTCAAATGAGCAAGGCACTTTGCAGCTTGCCACCAACCTTTCAGGACTTCTGGTaGAATTCCCATCTGCCACCA | + |
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Preference number: 4 (lower is better) Translates to: THSVHFQMSKALCSLPPTFQDFW*NSHLPP Trigger: TGGTGGCAGATGGGAATTCCACCAGAAGTCCTGAAA...GGTTGGTGGCAAGCTGCAAAGTGCCTTGCTCATTTGAAAATGGACAGAATGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000395743.8 ENST00000512743.1 |
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| CDS-3UTR TCA 90 bp | ACACATTCTGTCCATTTTCAAATGAGCAAGGCACTTTGCAGCTTGCCACCAACCCTGTCCATTTTCAAATaGGCAAGGCACTTTGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: THSVHFQMSKALCSLPPTLSIFK*ARHFAA Trigger: AGCTGCAAAGTGCCTTGCTCATTTGAAAATGGACAG...GGTTGGTGGCAAGCTGCAAAGTGCCTTGCTCATTTGAAAATGGACAGAATGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000395743.8 ENST00000512743.1 |
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| CDS-3UTR TCA 90 bp | CCTGAGACACATTCTGTCCATTTTCAAATGAGCAAGGCACTTTGCAGCTTGCCACTGTCCATTTTCAAATaGGCAAGGCACTTTGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: PETHSVHFQMSKALCSLPLSIFK*ARHFAA Trigger: AGCTGCAAAGTGCCTTGCTCATTTGAAAATGGACAG...TGGCAAGCTGCAAAGTGCCTTGCTCATTTGAAAATGGACAGAATGTGTCTCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000395743.8 ENST00000512743.1 |
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| CDS-3UTR TCA 90 bp | TGTCCATTTTCAAATGAGCAAGGCACTTTGCAGCTTGCCACCAACCTGGAGGTACTCCAGTGTTGTCACTaGCCATTACTCCCATATAAA | + |
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Preference number: 4 (lower is better) Translates to: CPFSNEQGTLQLATNLEVLQCCH*PLLPYK Trigger: TTTATATGGGAGTAATGGTCAGTGACAACACTGGAG...TACCTCCAGGTTGGTGGCAAGCTGCAAAGTGCCTTGCTCATTTGAAAATGGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395743.8 |
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| CDS-3UTR TCA 90 bp | AATGAGGATATGGTCACAACCGGTCCCTACCTGGTCTCTCCAGTGTTGTCACTGATTTCAGCATTTGTCTaGATTCTCCACTTCACTATG | + |
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Preference number: 4 (lower is better) Translates to: NEDMVTTGPYLVSPVLSLISAFV*ILHFTM Trigger: CATAGTGAAGTGGAGAATTCAGACAAATGCTGAAAT...CAGTGACAACACTGGAGAGACCAGGTAGGGACCGGTTGTGACCATATCCTCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395743.8 |
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| CDS-3UTR TCA 90 bp | AAAACACCATGGATGCTAGAAGGTAATATGCGATTTCAGCATTTGTCTGAATTCTCTGCCACCACACAGTaGAGGATCACTAGACCCAGG | + |
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Preference number: 4 (lower is better) Translates to: KTPWMLEGNMRFQHLSEFSATTQ*RITRPR Trigger: CCTGGGTCTAGTGATCCTTCACTGTGTGGTGGCAGA...GAATTCAGACAAATGCTGAAATCGCATATTACCTTCTAGCATCCATGGTGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395743.8 |
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| CDS-3UTR TCA 90 bp | ATATTTATTCCAAGCTCCTTTCGTATCGAAGAAGACTACATAAGAGAAAGGGCAGTGGCCTTTCCGCTTTaGTTGTGTGGTGGTAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: IFIPSSFRIEEDYIRERAVAFPL*LCGGSC Trigger: GCAGCTACCACCACACAATCAAAGCGGAAAGGCCAC...TGCCCTTTCTCTTATGTAGTCTTCTTCGATACGAAAGGAGCTTGGAATAAATAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395743.8 |
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| CDS-3UTR TCA 90 bp | CCTGAGACACATTCTGTCCATTTTCAAATGAGCAAGGCACTTTGCAGCTTGCCACATCAAGAACATAAATaGGGATATGGTCACAACCGG | + |
|
Preference number: 4 (lower is better) Translates to: PETHSVHFQMSKALCSLPHQEHK*GYGHNR Trigger: CCGGTTGTGACCATATCCTCATTTATGTTCTTGATG...TGGCAAGCTGCAAAGTGCCTTGCTCATTTGAAAATGGACAGAATGTGTCTCAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395743.8 |
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| CDS-3UTR GCA 90 bp | TGTCCATTTTCAAATGAGCAAGGCACTTTGCAGCTTGCCACCAACCTGGAGGTATTTCCCTTCTGTTGTTaGTACCTAACCAGTTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: CPFSNEQGTLQLATNLEVFPFCC*YLTSCF Trigger: AAAGCAACTGGTTAGGTAGCAACAACAGAAGGGAAA...TACCTCCAGGTTGGTGGCAAGCTGCAAAGTGCCTTGCTCATTTGAAAATGGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000395743.8 ENST00000512743.1 |
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| CDS-3UTR GCA 90 bp | CCTGAGACACATTCTGTCCATTTTCAAATGAGCAAGGCACTTTGCAGCTTGCCACCAGGGCTTAAGGAATaGCAAGCATTTACTTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PETHSVHFQMSKALCSLPPGLKE*QAFTFP Trigger: TGGAAAAGTAAATGCTTGGCATTCCTTAAGCCCTGG...TGGCAAGCTGCAAAGTGCCTTGCTCATTTGAAAATGGACAGAATGTGTCTCAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000395743.8 |
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| CDS-3UTR TCA 90 bp | CCTGAGACACATTCTGTCCATTTTCAAATGAGCAAGGCACTTTGCAGCTTGCCACTTGGGTTATATTATTaGGTTAGGTTGCACCGATTC | + |
|
Preference number: 4 (lower is better) Translates to: PETHSVHFQMSKALCSLPLGLYY*VRLHRF Trigger: GAATCGGTGCAACCTAACTCAATAATATAACCCAAG...TGGCAAGCTGCAAAGTGCCTTGCTCATTTGAAAATGGACAGAATGTGTCTCAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395743.8 |
||
| CDS-3UTR GCA 90 bp | TATTCCAAGCTCCTTTCGTATCGAAGAAGACTACATAAGAGAAAGGGCATGAATGGTGGAATTCCCATCTaGCACCACACAGTGAAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: YSKLLSYRRRLHKRKGMNGGIPI*HHTVKD Trigger: ATCCTTCACTGTGTGGTGGCAGATGGGAATTCCACC...ATTCATGCCCTTTCTCTTATGTAGTCTTCTTCGATACGAAAGGAGCTTGGAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395743.8 |
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| CDS-3UTR GCA 90 bp | ATATTTATTCCAAGCTCCTTTCGTATCGAAGAAGACTACATAAGAGAAAGGGCAAGGCACTTTGCAGCTTaGCACCAACCTGGAGGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: IFIPSSFRIEEDYIRERARHFAA*HQPGGN Trigger: GTTACCTCCAGGTTGGTGGCAAGCTGCAAAGTGCCT...TGCCCTTTCTCTTATGTAGTCTTCTTCGATACGAAAGGAGCTTGGAATAAATAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395743.8 |
||
| CDS-3UTR GCA 90 bp | CCTGAGACACATTCTGTCCATTTTCAAATGAGCAAGGCACTTTGCAGCTTGCCATTTCCCTTCTGTTGTTaGTACCTAACCAGTTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: PETHSVHFQMSKALCSLPFPFCC*YLTSCF Trigger: AAAGCAACTGGTTAGGTAGCAACAACAGAAGGGAAA...TGGCAAGCTGCAAAGTGCCTTGCTCATTTGAAAATGGACAGAATGTGTCTCAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000395743.8 ENST00000512743.1 |
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| CDS-3UTR CCA 90 bp | TATTCCAAGCTCCTTTCGTATCGAAGAAGACTACATAAGAGAAAGGGCATGAATGGGCACCTAGAGAAGTaGCCTTTCCGCTTTGATTGT | + |
|
Preference number: 4 (lower is better) Translates to: YSKLLSYRRRLHKRKGMNGHLEK*PFRFDC Trigger: ACAATCAAAGCGGAAAGGCCACTTCTCTAGGTGCCC...ATTCATGCCCTTTCTCTTATGTAGTCTTCTTCGATACGAAAGGAGCTTGGAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395743.8 |
||
| CDS-3UTR TCA 90 bp | TATTCCAAGCTCCTTTCGTATCGAAGAAGACTACATAAGAGAAAGGGCATGAATGTGGGAAGACGGTCTTaGCATCTCACAATCATACCA | + |
|
Preference number: 4 (lower is better) Translates to: YSKLLSYRRRLHKRKGMNVGRRS*HLTIIP Trigger: TGGTATGATTGTGAGATGTCAAGACCGTCTTCCCAC...ATTCATGCCCTTTCTCTTATGTAGTCTTCTTCGATACGAAAGGAGCTTGGAATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395743.8 |
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| CDS-3UTR TCA 90 bp | ACACATTCTGTCCATTTTCAAATGAGCAAGGCACTTTGCAGCTTGCCACCAACCATAAGAGAAAGGGCATaGATGAGCTTAAATGAGACT | + |
|
Preference number: 4 (lower is better) Translates to: THSVHFQMSKALCSLPPTIRERA*MSLNET Trigger: AGTCTCATTTAAGCTCATTCATGCCCTTTCTCTTAT...GGTTGGTGGCAAGCTGCAAAGTGCCTTGCTCATTTGAAAATGGACAGAATGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395743.8 |
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| CDS-3UTR CCA 90 bp | GATATTTATTCCAAGCTCCTTTCGTATCGAAGAAGACTACATAAGAGAAAGGGCGAGCACTTGGCAAGATaGTCCCAAGTAATAGATGTT | + |
|
Preference number: 4 (lower is better) Translates to: DIYSKLLSYRRRLHKRKGEHLAR*SQVIDV Trigger: AACATCTATTACTTGGGACCATCTTGCCAAGTGCTC...GCCCTTTCTCTTATGTAGTCTTCTTCGATACGAAAGGAGCTTGGAATAAATATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395743.8 |
||
| 3UTR CAA 72 bp | CCATGGATGCTAGAAGGTAATATGCGATTTCAGCATTaGTCTGAATTCTCCACTTCACTATGGAATCTACAT | + |
|
Preference number: 4 (lower is better) Translates to: PWMLEGNMRFQH*SEFSTSLWNLH Trigger: ATGTAGATTCCATAGTGAAGTGGAGAATTCAGACAAATGCTGAAATCGCATATTACCTTCTAGCATCCATGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395743.8 |
||
| CDS-3UTR TCA 90 bp | GATATTTATTCCAAGCTCCTTTCGTATCGAAGAAGACTACATAAGAGAAAGGGCTTAGATTATTTGACTTaGCTTCTTTGGCCCTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: DIYSKLLSYRRRLHKRKGLDYLT*LLWPCF Trigger: GAAACAGGGCCAAAGAAGTCAAGTCAAATAATCTAA...GCCCTTTCTCTTATGTAGTCTTCTTCGATACGAAAGGAGCTTGGAATAAATATC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395743.8 |
||
| CDS-3UTR CCA 90 bp | GATATTTATTCCAAGCTCCTTTCGTATCGAAGAAGACTACATAAGAGAAAGGGCTCACTCAAAACACCATaGATGCTAGAAGGTAATATG | + |
|
Preference number: 4 (lower is better) Translates to: DIYSKLLSYRRRLHKRKGSLKTP*MLEGNM Trigger: CATATTACCTTCTAGCATCCATGGTGTTTTGAGTGA...GCCCTTTCTCTTATGTAGTCTTCTTCGATACGAAAGGAGCTTGGAATAAATATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395743.8 |
||
| CDS-3UTR TCA 90 bp | ATATTTATTCCAAGCTCCTTTCGTATCGAAGAAGACTACATAAGAGAAAGGGCAGCATCAAAATTTACCTaGGAGCAATCATATATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: IFIPSSFRIEEDYIRERAASKFT*EQSYML Trigger: CAGCATATATGATTGCTCTCAGGTAAATTTTGATGC...TGCCCTTTCTCTTATGTAGTCTTCTTCGATACGAAAGGAGCTTGGAATAAATAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395743.8 |
||
| CDS-3UTR CCA 90 bp | ATATTTATTCCAAGCTCCTTTCGTATCGAAGAAGACTACATAAGAGAAAGGGCATTCTCCACTTCACTATaGAATCTACATTGCAAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: IFIPSSFRIEEDYIRERAFSTSL*NLHCKV Trigger: TACTTTGCAATGTAGATTCCATAGTGAAGTGGAGAA...TGCCCTTTCTCTTATGTAGTCTTCTTCGATACGAAAGGAGCTTGGAATAAATAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395743.8 |
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| 3UTR CAA 72 bp | TCACAATCATACCAAAACACAGTTCAGTATAAAACCTaGGGTTATATTATTGAGTTAGGTTGCACCGATTCA | + |
|
Preference number: 4 (lower is better) Translates to: SQSYQNTVQYKT*GYIIELGCTDS Trigger: TGAATCGGTGCAACCTAACTCAATAATATAACCCAAGGTTTTATACTGAACTGTGTTTTGGTATGATTGTGA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000395743.8 |
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| CDS GCA 90 bp | GACCCAGGGCAAGGGCCAGGAGCAGTGGCAGGGAGCTGGCGCCGCTaGACCGGGCGGCCCGGTCCATCAACCCCGCTCTGCCGGGCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: DPGQGPGAVAGSWRR*TGRPGPSTPLCRAG Trigger: CCCGGCCCGGCAGAGCGGGGTTGATGGACCGGGCCGCCCGGTGCAGCGGCGCCAGCTCCCTGCCACTGCTCCTGGCCCTTGCCCTGGGTC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395743.8 |
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| CDS GCA 90 bp | AGCTGGCGCCGCTGCACCGGGCGGCCCGGTCCATCAACCCCGCTCTaGCGGGCCGGGCAGCCCCTAGACAAGTCTCCCTCCTTCTTCGCC | + |
|
Preference number: 5 (lower is better) Translates to: SWRRCTGRPGPSTPL*RAGQPLDKSPSFFA Trigger: GGCGAAGAAGGAGGGAGACTTGTCTAGGGGCTGCCCGGCCCGGCAGAGCGGGGTTGATGGACCGGGCCGCCCGGTGCAGCGGCGCCAGCT 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000395743.8 |
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| CDS CCA 90 bp | GGATCACTAGACCCAGGGCAAGGGCCAGGAGCAGTGGCAGGGAGCTaGCGCCGCTGCACCGGGCGGCCCGGTCCATCAACCCCGCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: GSLDPGQGPGAVAGS*RRCTGRPGPSTPLC Trigger: GCAGAGCGGGGTTGATGGACCGGGCCGCCCGGTGCAGCGGCGCCAGCTCCCTGCCACTGCTCCTGGCCCTTGCCCTGGGTCTAGTGATCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395743.8 |
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| CDS GCA 90 bp | CCCTCCTTCTTCGCCCCCTTCCCGGGCCTCGGGCGCCTGAGAGGGTaGCTGGAAACTAATCCCGGAGGCAGAAGGAAACGAAACTACTTC | + |
|
Preference number: 5 (lower is better) Translates to: PSFFAPFPGLGRLRG*LETNPGGRRKRNYF Trigger: GAAGTAGTTTCGTTTCCTTCTGCCTCCGGGATTAGTTTCCAGGCACCCTCTCAGGCGCCCGAGGCCCGGGAAGGGGGCGAAGAAGGAGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000395743.8 |
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| CDS CCA 90 bp | GAAACTAATCCCGGAGGCAGAAGGAAACGAAACTACTTCCCAGGCTaGCACCCTGGCTACAAGGCAGGGAAACACCCAGGGCGGGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: ETNPGGRRKRNYFPG*HPGYKAGKHPGREA Trigger: GGCCTCCCGCCCTGGGTGTTTCCCTGCCTTGTAGCCAGGGTGCCAGCCTGGGAAGTAGTTTCGTTTCCTTCTGCCTCCGGGATTAGTTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395743.8 |
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| CDS-3UTR CAA 90 bp | AATGAGGATATGGTCACAACCGGTCCCTACCTGGTCTCTCCAGTGTTGTCACTGGGAGTAAAGGAGCACTaGGCAAGATGGTCCCAAGTA | + |
|
Preference number: 5 (lower is better) Translates to: NEDMVTTGPYLVSPVLSLGVKEH*ARWSQV Trigger: TACTTGGGACCATCTTGCCAAGTGCTCCTTTACTCC...CAGTGACAACACTGGAGAGACCAGGTAGGGACCGGTTGTGACCATATCCTCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395743.8 |
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| CDS-3UTR CAA 90 bp | CCTGAGACACATTCTGTCCATTTTCAAATGAGCAAGGCACTTTGCAGCTTGCCACTGGTCTCTCCAGTGTaGTCACTGACCATTACTCCC | + |
|
Preference number: 5 (lower is better) Translates to: PETHSVHFQMSKALCSLPLVSPV*SLTITP Trigger: GGGAGTAATGGTCAGTGACAACACTGGAGAGACCAG...TGGCAAGCTGCAAAGTGCCTTGCTCATTTGAAAATGGACAGAATGTGTCTCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395743.8 |
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| CDS-3UTR CAA 90 bp | TGTCCATTTTCAAATGAGCAAGGCACTTTGCAGCTTGCCACCAACCTGGAGGTAGCAGTAATGCTTGTATaGCTTGGGGCACCTAGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: CPFSNEQGTLQLATNLEVAVMLV*LGAPRE Trigger: TTCTCTAGGTGCCCCAAGCAATACAAGCATTACTGC...TACCTCCAGGTTGGTGGCAAGCTGCAAAGTGCCTTGCTCATTTGAAAATGGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000395743.8 ENST00000512743.1 |
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| CDS-3UTR CAA 90 bp | TGTCCATTTTCAAATGAGCAAGGCACTTTGCAGCTTGCCACCAACCTGGAGGTACAACTCTCTCACACCTaGCTCCAATGTAGCCTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: CPFSNEQGTLQLATNLEVQLSHT*LQCSLH Trigger: ATGAAGGCTACATTGGAGCAAGGTGTGAGAGAGTTG...TACCTCCAGGTTGGTGGCAAGCTGCAAAGTGCCTTGCTCATTTGAAAATGGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395743.8 |
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| CDS-3UTR CAA 90 bp | AATGAGGATATGGTCACAACCGGTCCCTACCTGGTCTCTCCAGTGTTGTCACTGATTTCCCTTCTGTTGTaGCTACCTAACCAGTTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: NEDMVTTGPYLVSPVLSLISLLL*LPNQLL Trigger: AAGCAACTGGTTAGGTAGCAACAACAGAAGGGAAAT...CAGTGACAACACTGGAGAGACCAGGTAGGGACCGGTTGTGACCATATCCTCATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395743.8 |
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| CDS-3UTR CAA 90 bp | ACACATTCTGTCCATTTTCAAATGAGCAAGGCACTTTGCAGCTTGCCACCAACCGCAGTAATGCTTGTATaGCTTGGGGCACCTAGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: THSVHFQMSKALCSLPPTAVMLV*LGAPRE Trigger: TTCTCTAGGTGCCCCAAGCAATACAAGCATTACTGC...GGTTGGTGGCAAGCTGCAAAGTGCCTTGCTCATTTGAAAATGGACAGAATGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000395743.8 ENST00000512743.1 |
||
| CDS-3UTR CAA 90 bp | AATGAGGATATGGTCACAACCGGTCCCTACCTGGTCTCTCCAGTGTTGTCACTGTTTGACTTGACTTCTTaGGCCCTGTTTCCATATGTA | + |
|
Preference number: 5 (lower is better) Translates to: NEDMVTTGPYLVSPVLSLFDLTS*ALFPYV Trigger: TACATATGGAAACAGGGCCAAAGAAGTCAAGTCAAA...CAGTGACAACACTGGAGAGACCAGGTAGGGACCGGTTGTGACCATATCCTCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395743.8 |
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| CDS-3UTR CAA 90 bp | TGTCCATTTTCAAATGAGCAAGGCACTTTGCAGCTTGCCACCAACCTGGAGGTAGAAATTTCCCTTCTGTaGTTGCTACCTAACCAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: CPFSNEQGTLQLATNLEVEISLL*LLPNQL Trigger: CAACTGGTTAGGTAGCAACAACAGAAGGGAAATTTC...TACCTCCAGGTTGGTGGCAAGCTGCAAAGTGCCTTGCTCATTTGAAAATGGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000395743.8 ENST00000512743.1 |
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| CDS-3UTR CAA 90 bp | ACACATTCTGTCCATTTTCAAATGAGCAAGGCACTTTGCAGCTTGCCACCAACCATTTCCCTTCTGTTGTaGCTACCTAACCAGTTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: THSVHFQMSKALCSLPPTISLLL*LPNQLL Trigger: AAGCAACTGGTTAGGTAGCAACAACAGAAGGGAAAT...GGTTGGTGGCAAGCTGCAAAGTGCCTTGCTCATTTGAAAATGGACAGAATGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000395743.8 ENST00000512743.1 |
||
| CDS-3UTR CAA 90 bp | ACACATTCTGTCCATTTTCAAATGAGCAAGGCACTTTGCAGCTTGCCACCAACCGAAATTTCCCTTCTGTaGTTGCTACCTAACCAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: THSVHFQMSKALCSLPPTEISLL*LLPNQL Trigger: CAACTGGTTAGGTAGCAACAACAGAAGGGAAATTTC...GGTTGGTGGCAAGCTGCAAAGTGCCTTGCTCATTTGAAAATGGACAGAATGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000395743.8 ENST00000512743.1 |
||
| CDS GCA 72 bp | CGCTGCACCGGGCGGCCCGGTCCATCAACCCCGCTCTaGCGGGCCGGGCAGCCCCTAGACAAGTCTCCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: RCTGRPGPSTPL*RAGQPLDKSPS Trigger: GGAGGGAGACTTGTCTAGGGGCTGCCCGGCCCGGCAGAGCGGGGTTGATGGACCGGGCCGCCCGGTGCAGCG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000395743.8 |
||
| CDS GCA 72 bp | CAAGGGCCAGGAGCAGTGGCAGGGAGCTGGCGCCGCTaGACCGGGCGGCCCGGTCCATCAACCCCGCTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: QGPGAVAGSWRR*TGRPGPSTPLC Trigger: GCAGAGCGGGGTTGATGGACCGGGCCGCCCGGTGCAGCGGCGCCAGCTCCCTGCCACTGCTCCTGGCCCTTG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395743.8 |
||
| CDS TCA 72 bp | CCTCCTTCTTCGCCCCCTTCCCGGGCCTCGGGCGCCTaGGAGGGTGCCTGGAAACTAATCCCGGAGGCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: PPSSPPSRASGA*EGAWKLIPEAE Trigger: TTCTGCCTCCGGGATTAGTTTCCAGGCACCCTCTCAGGCGCCCGAGGCCCGGGAAGGGGGCGAAGAAGGAGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000395743.8 |
||
| CDS GCA 72 bp | TTCGCCCCCTTCCCGGGCCTCGGGCGCCTGAGAGGGTaGCTGGAAACTAATCCCGGAGGCAGAAGGAAACGA | + |
|
Preference number: 6 (lower is better) Translates to: FAPFPGLGRLRG*LETNPGGRRKR Trigger: TCGTTTCCTTCTGCCTCCGGGATTAGTTTCCAGGCACCCTCTCAGGCGCCCGAGGCCCGGGAAGGGGGCGAA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000395743.8 |
||
| CDS CCA 72 bp | CCCGGAGGCAGAAGGAAACGAAACTACTTCCCAGGCTaGCACCCTGGCTACAAGGCAGGGAAACACCCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: PGGRRKRNYFPG*HPGYKAGKHPG Trigger: CCCTGGGTGTTTCCCTGCCTTGTAGCCAGGGTGCCAGCCTGGGAAGTAGTTTCGTTTCCTTCTGCCTCCGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395743.8 |
||
| CDS GCA 72 bp | TTACGACGTTTCCGAAGAGGGACACAGGAGGGCGTCTaGTCGGCCACCACGAAGCGGCATCTCCCTTTGATG | + |
|
Preference number: 6 (lower is better) Translates to: LRRFRRGTQEGV*SATTKRHLPLM Trigger: CATCAAAGGGAGATGCCGCTTCGTGGTGGCCGAGCAGACGCCCTCCTGTGTCCCTCTTCGGAAACGTCGTAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000512743.1 |
||
| CDS TCA 72 bp | TTGCTTGGGGCACCTAGAGAAGTGGCCTTTCCGCTTTaGTTGTGTGGTGGTAGCTGCACAGTTTTCCTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: LLGAPREVAFPL*LCGGSCTVFLR Trigger: CCTGAGGAAAACTGTGCAGCTACCACCACACAATCAAAGCGGAAAGGCCACTTCTCTAGGTGCCCCAAGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000395743.8 ENST00000512743.1 |
||
| CDS CAA 72 bp | GAAGCGGCATCTCCCTTTGATGCAGTAATGCTTGTATaGCTTGGGGCACCTAGAGAAGTGGCCTTTCCGCTT | + |
|
Preference number: 6 (lower is better) Translates to: EAASPFDAVMLV*LGAPREVAFPL Trigger: AAGCGGAAAGGCCACTTCTCTAGGTGCCCCAAGCAATACAAGCATTACTGCATCAAAGGGAGATGCCGCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000395743.8 ENST00000512743.1 |
||
| CDS CAA 90 bp | GTCCTCTGTCTCCTCTTAGGTAAAACAAGTCAACTCTCTCACACCTaGCTCCAATGTAGCCTTCATCACAGACACAGGAGGGCGTCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: VLCLLLGKTSQLSHT*LQCSLHHRHRRASA Trigger: AGCAGACGCCCTCCTGTGTCTGTGATGAAGGCTACATTGGAGCAAGGTGTGAGAGAGTTGACTTGTTTTACCTAAGAGGAGACAGAGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395743.8 |
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