RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BRF1 (Homo sapiens)

Ensembl gene IDs: ENSG00000185024

Ensembl transcript IDs: ENST00000327359.7, ENST00000379932.8, ENST00000379937.6, ENST00000392557.8, ENST00000440513.7, ENST00000446501.6, ENST00000546417.5, ENST00000546997.1, ENST00000547052.1, ENST00000547374.5, ENST00000547530.7, ENST00000547562.5, ENST00000548421.2, ENST00000549044.5, ENST00000549655.5, ENST00000550208.1, ENST00000550375.1, ENST00000550692.1, ENST00000551787.5, ENST00000552127.5, ENST00000619151.4, ENST00000635152.1

Found 1253 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTGCCGGCAGCCGCAGGGCTCCTGGGCCCACAACTCAAGTGGCCCTaGAGCAGGGGTCTGACCCCCATGCTGCTCCAGGCGGTGCAGGCA +
Preference number: 1 (lower is better)
Translates to: LPAAAGLLGPQLKWP*SRGLTPMLLQAVQA
Trigger: TGCCTGCACCGCCTGGAGCAGCATGGGGGTCAGACCCCTGCTCCAGGGCCACTTGAGTTGTGGGCCCAGGAGCCCTGCGGCTGCCGGCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
3UTR GCA 90 bp AGGACGGGTGGGCGCCGGTCTCAGCTGTCGGGCACTCAGTTCACCTaGCGGCAGCCGCAGGGCTCCTGGGCCCACAACTCAAGTGGCCCT +
Preference number: 1 (lower is better)
Translates to: RTGGRRSQLSGTQFT*RQPQGSWAHNSSGP
Trigger: AGGGCCACTTGAGTTGTGGGCCCAGGAGCCCTGCGGCTGCCGGCAGGTGAACTGAGTGCCCGACAGCTGAGACCGGCGCCCACCCGTCCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
3UTR CCA 90 bp GGCTGCTGGCGCCGAGTGCTGCTCAGGAGGGGACGGTGCGGAGGGTaGGCTGGAGACTCCAGAGCTGGTCCTGAGTCACAGGGCCAGCAC +
Preference number: 1 (lower is better)
Translates to: GCWRRVLLRRGRCGG*AGDSRAGPESQGQH
Trigger: GTGCTGGCCCTGTGACTCAGGACCAGCTCTGGAGTCTCCAGCCCACCCTCCGCACCGTCCCCTCCTGAGCAGCACTCGGCGCCAGCAGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
3UTR GCA 90 bp GACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCTGCCTaGTGCGGTCCTGGAAGCCCGTCTGATGCTGAGGAGACCCGCGAG +
Preference number: 1 (lower is better)
Translates to: DRCHLSPGVSALGPA*CGPGSPSDAEETRE
Trigger: CTCGCGGGTCTCCTCAGCATCAGACGGGCTTCCAGGACCGCAGCAGGCAGGCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
3UTR GCA 90 bp AGGGCTCTGGCTTCCACTCTGGCAGAGGCTGCTGGCGCCGAGTGCTaGTCAGGAGGGGACGGTGCGGAGGGTGGGCTGGAGACTCCAGAG +
Preference number: 1 (lower is better)
Translates to: RALASTLAEAAGAEC*SGGDGAEGGLETPE
Trigger: CTCTGGAGTCTCCAGCCCACCCTCCGCACCGTCCCCTCCTGAGCAGCACTCGGCGCCAGCAGCCTCTGCCAGAGTGGAAGCCAGAGCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
3UTR GCA 90 bp TGCAGGGCTCTGGCTTCCACTCTGGCAGAGGCTGCTGGCGCCGAGTaGTGCTCAGGAGGGGACGGTGCGGAGGGTGGGCTGGAGACTCCA +
Preference number: 1 (lower is better)
Translates to: CRALASTLAEAAGAE*CSGGDGAEGGLETP
Trigger: TGGAGTCTCCAGCCCACCCTCCGCACCGTCCCCTCCTGAGCAGCACTCGGCGCCAGCAGCCTCTGCCAGAGTGGAAGCCAGAGCCCTGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
3UTR CCA 90 bp GAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTaGGGCCTGCCTGCTGCGGTCCTGGAAGCCCGTCTGATGCTGAGG +
Preference number: 1 (lower is better)
Translates to: EGCGTGATCHQESRR*GLPAAVLEARLMLR
Trigger: CCTCAGCATCAGACGGGCTTCCAGGACCGCAGCAGGCAGGCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
3UTR CCA 90 bp ATCCGGGGCAGCCATGCCAGAGCTGAGACCTCCTACGAGTGGTACTaGGGCCTTCCCACGAAGAGGCCTGGGGAGGCTCTCGGGCCTCCG +
Preference number: 1 (lower is better)
Translates to: IRGSHARAETSYEWY*GLPTKRPGEALGPP
Trigger: CGGAGGCCCGAGAGCCTCCCCAGGCCTCTTCGTGGGAAGGCCCCAGTACCACTCGTAGGAGGTCTCAGCTCTGGCATGGCTGCCCCGGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
3UTR GCA 90 bp AGGCAGGGGTGGGGGTGTCTGCCTCGGACGAGGCAGGTATCTGGATaGAGGGCCACAGCTGGAGGCAGAGGACCTTCAAGGAGCTGCTGC +
Preference number: 1 (lower is better)
Translates to: RQGWGCLPRTRQVSG*RATAGGRGPSRSCC
Trigger: GCAGCAGCTCCTTGAAGGTCCTCTGCCTCCAGCTGTGGCCCTGCATCCAGATACCTGCCTCGTCCGAGGCAGACACCCCCACCCCTGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
3UTR GCA 90 bp CGGGGAACTCCCAGCGCCAGGACACTATGCAGGCTATGCCCGCACTaGCTACAGAGCTATGCTCAGGACGGGTGGGCGCCGGTCTCAGCT +
Preference number: 1 (lower is better)
Translates to: RGTPSARTLCRLCPH*LQSYAQDGWAPVSA
Trigger: AGCTGAGACCGGCGCCCACCCGTCCTGAGCATAGCTCTGTAGGCAGTGCGGGCATAGCCTGCATAGTGTCCTGGCGCTGGGAGTTCCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
3UTR GCA 90 bp CTCTGTCCACGGGGAACTCCCAGCGCCAGGACACTATGCAGGCTATaGCCGCACTGCCTACAGAGCTATGCTCAGGACGGGTGGGCGCCG +
Preference number: 1 (lower is better)
Translates to: LCPRGTPSARTLCRL*PHCLQSYAQDGWAP
Trigger: CGGCGCCCACCCGTCCTGAGCATAGCTCTGTAGGCAGTGCGGGCATAGCCTGCATAGTGTCCTGGCGCTGGGAGTTCCCCGTGGACAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
3UTR CCA 90 bp TGCAGGCTATGCCCGCACTGCCTACAGAGCTATGCTCAGGACGGGTaGGCGCCGGTCTCAGCTGTCGGGCACTCAGTTCACCTGCCGGCA +
Preference number: 1 (lower is better)
Translates to: CRLCPHCLQSYAQDG*APVSAVGHSVHLPA
Trigger: TGCCGGCAGGTGAACTGAGTGCCCGACAGCTGAGACCGGCGCCCACCCGTCCTGAGCATAGCTCTGTAGGCAGTGCGGGCATAGCCTGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
3UTR GCA 90 bp CGCCAGGACACTATGCAGGCTATGCCCGCACTGCCTACAGAGCTATaGTCAGGACGGGTGGGCGCCGGTCTCAGCTGTCGGGCACTCAGT +
Preference number: 1 (lower is better)
Translates to: RQDTMQAMPALPTEL*SGRVGAGLSCRALS
Trigger: ACTGAGTGCCCGACAGCTGAGACCGGCGCCCACCCGTCCTGAGCATAGCTCTGTAGGCAGTGCGGGCATAGCCTGCATAGTGTCCTGGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
3UTR GCA 90 bp GCCCTCTGGCTCTGTCCACGGGGAACTCCCAGCGCCAGGACACTATaGAGGCTATGCCCGCACTGCCTACAGAGCTATGCTCAGGACGGG +
Preference number: 1 (lower is better)
Translates to: ALWLCPRGTPSARTL*RLCPHCLQSYAQDG
Trigger: CCCGTCCTGAGCATAGCTCTGTAGGCAGTGCGGGCATAGCCTGCATAGTGTCCTGGCGCTGGGAGTTCCCCGTGGACAGAGCCAGAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
3UTR GCA 90 bp AATCCCAATGGTAAGTTCCACATGGGACGAGGGCTGTGGGACAGGTaGCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCTGCCTGCTGC +
Preference number: 1 (lower is better)
Translates to: NPNGKFHMGRGLWDR*HLSPGVSALGPACC
Trigger: GCAGCAGGCAGGCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTCCCATGTGGAACTTACCATTGGGATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
3UTR GCA 90 bp GGCCAGCACACTCAGCCCTCCACACACTTGGACCAGCAGTGGGGCTaGCCCAAGCCTGTTTCCTTAATAGTAGCAACACCACACTGCCAG +
Preference number: 1 (lower is better)
Translates to: GQHTQPSTHLDQQWG*PKPVSLIVATPHCQ
Trigger: CTGGCAGTGTGGTGTTGCTACTATTAAGGAAACAGGCTTGGGGCAGCCCCACTGCTGGTCCAAGTGTGTGGAGGGCTGAGTGTGCTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
3UTR GCA 90 bp GGACAAAAGTTCACTGTTCACCCAGGCCTAGCTAACACCCAACCGTaGCCAGCATTGGCAGGTGCCCTCCTGCCATGGAGACCCACACTC +
Preference number: 1 (lower is better)
Translates to: GQKFTVHPGLANTQP*PALAGALLPWRPTL
Trigger: GAGTGTGGGTCTCCATGGCAGGAGGGCACCTGCCAATGCTGGGCACGGTTGGGTGTTAGCTAGGCCTGGGTGAACAGTGAACTTTTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548421.2
3UTR CCA 90 bp TCACAGGGCCAGCACACTCAGCCCTCCACACACTTGGACCAGCAGTaGGGCTGCCCCAAGCCTGTTTCCTTAATAGTAGCAACACCACAC +
Preference number: 1 (lower is better)
Translates to: SQGQHTQPSTHLDQQ*GCPKPVSLIVATPH
Trigger: GTGTGGTGTTGCTACTATTAAGGAAACAGGCTTGGGGCAGCCCCACTGCTGGTCCAAGTGTGTGGAGGGCTGAGTGTGCTGGCCCTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
3UTR CCA 90 bp TTTCCCTTGCTGAATAGAAACACAATCCCAATGGTAAGTTCCACATaGGACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCT +
Preference number: 1 (lower is better)
Translates to: FPLLNRNTIPMVSST*DEGCGTGATCHQES
Trigger: AGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTCCCATGTGGAACTTACCATTGGGATTGTGTTTCTATTCAGCAAGGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
3UTR-3UTR GCA 90 bp GTGGGCGCCGGTCTCAGCTGTCGGGCACTCAGTTCACCTGCCGGCAGCCGCAGGGCTGGCGCCGAGTGCTaGTCAGGAGGGGACGGTGCG +
Preference number: 2 (lower is better)
Translates to: VGAGLSCRALSSPAGSRRAGAEC*SGGDGA
Trigger: CGCACCGTCCCCTCCTGAGCAGCACTCGGCGCCAGC...CCTGCGGCTGCCGGCAGGTGAACTGAGTGCCCGACAGCTGAGACCGGCGCCCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
3UTR-3UTR GCA 90 bp GTGGGCGCCGGTCTCAGCTGTCGGGCACTCAGTTCACCTGCCGGCAGCCGCAGGACCCGCGAGGCCCCCTaGCAGGACATCACCTGCCTG +
Preference number: 2 (lower is better)
Translates to: VGAGLSCRALSSPAGSRRTREAP*QDITCL
Trigger: CAGGCAGGTGATGTCCTGGCAGGGGGCCTCGCGGGT...CCTGCGGCTGCCGGCAGGTGAACTGAGTGCCCGACAGCTGAGACCGGCGCCCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
3UTR-3UTR GCA 90 bp TCGGGCACTCAGTTCACCTGCCGGCAGCCGCAGGGCTCCTGGGCCCACAACTCAGCGCTGGGGCCTGCCTaGTGCGGTCCTGGAAGCCCG +
Preference number: 2 (lower is better)
Translates to: SGTQFTCRQPQGSWAHNSALGPA*CGPGSP
Trigger: CGGGCTTCCAGGACCGCAGCAGGCAGGCCCCAGCGC...TGAGTTGTGGGCCCAGGAGCCCTGCGGCTGCCGGCAGGTGAACTGAGTGCCCGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
3UTR-3UTR TCA 90 bp GTCGACGGCAGGCAGCGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCGCCCCTGGGGGTCAGTaGGGCACGGCTCTGCCTCAA +
Preference number: 2 (lower is better)
Translates to: VDGRQRDPALHTPGPHLIAPGGQ*GTALPQ
Trigger: TTGAGGCAGAGCCGTGCCTCACTGACCCCCAGGGGC...GATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCGCTGCCTGCCGTCGAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
3UTR-3UTR TCA 90 bp GCCAGCCTTGGAGGGTCCTTGGATGAGTCGACGGCAGGCAGCGGGACCCAGCCCGCCCCTGGGGGTCAGTaGGGCACGGCTCTGCCTCAA +
Preference number: 2 (lower is better)
Translates to: ASLGGSLDESTAGSGTQPAPGGQ*GTALPQ
Trigger: TTGAGGCAGAGCCGTGCCTCACTGACCCCCAGGGGC...GGGCTGGGTCCCGCTGCCTGCCGTCGACTCATCCAAGGACCCTCCAAGGCTGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
3UTR-3UTR TCA 90 bp GACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCGCCCCTGGGGGTCAGTaGGGCACGGCTCTGCCTCAA +
Preference number: 2 (lower is better)
Translates to: DEGCGTGATCHQESRRWGAPGGQ*GTALPQ
Trigger: TTGAGGCAGAGCCGTGCCTCACTGACCCCCAGGGGC...GCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
3UTR-3UTR GCA 90 bp CTCAGGACGGGTGGGCGCCGGTCTCAGCTGTCGGGCACTCAGTTCACCTGCCGGCTGGGGCCTGCCTGCTaGGGTCCTGGAAGCCCGTCT +
Preference number: 2 (lower is better)
Translates to: LRTGGRRSQLSGTQFTCRLGPAC*GPGSPS
Trigger: AGACGGGCTTCCAGGACCGCAGCAGGCAGGCCCCAG...CCGGCAGGTGAACTGAGTGCCCGACAGCTGAGACCGGCGCCCACCCGTCCTGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
3UTR-3UTR GCA 90 bp ACTCTGGCAGAGGCTGCTGGCGCCGAGTGCTGCTCAGGAGGGGACGGTGCGGAGAGCGGGACCCAGCCCTaGACACACCCGGCCCACATC +
Preference number: 2 (lower is better)
Translates to: TLAEAAGAECCSGGDGAESGTQP*THPAHI
Trigger: GATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCGCT...CTCCGCACCGTCCCCTCCTGAGCAGCACTCGGCGCCAGCAGCCTCTGCCAGAGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
3UTR-3UTR TCA 90 bp AGTCGACGGCAGGCAGCGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATGCCCCTGGGGGTCAGTaGGGCACGGCTCTGCCTCAA +
Preference number: 2 (lower is better)
Translates to: SRRQAAGPSPAHTRPTSDAPGGQ*GTALPQ
Trigger: TTGAGGCAGAGCCGTGCCTCACTGACCCCCAGGGGC...ATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCGCTGCCTGCCGTCGACT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
3UTR-3UTR GCA 90 bp TGCTGCTCAGGAGGGGACGGTGCGGAGGGTGGGCTGGAGACTCCAGAGCTGGTCCTGGGGCCTGCCTGCTaGGGTCCTGGAAGCCCGTCT +
Preference number: 2 (lower is better)
Translates to: CCSGGDGAEGGLETPELVLGPAC*GPGSPS
Trigger: AGACGGGCTTCCAGGACCGCAGCAGGCAGGCCCCAG...GACCAGCTCTGGAGTCTCCAGCCCACCCTCCGCACCGTCCCCTCCTGAGCAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
3UTR-3UTR GCA 90 bp TGGCGCCGAGTGCTGCTCAGGAGGGGACGGTGCGGAGGGTGGGCTGGAGACTCCGGGCTGTGGGACAGGTaGCACCTGTCACCAGGAGTC +
Preference number: 2 (lower is better)
Translates to: WRRVLLRRGRCGGWAGDSGLWDR*HLSPGV
Trigger: GACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCC...GGAGTCTCCAGCCCACCCTCCGCACCGTCCCCTCCTGAGCAGCACTCGGCGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
3UTR-3UTR CCA 90 bp GGGTGGGGGTGTCTGCCTCGGACGAGGCAGGTATCTGGATGCAGGGCCACAGCTCAGGAGTCTCGGCGCTaGGGCCTGCCTGCTGCGGTC +
Preference number: 2 (lower is better)
Translates to: GWGCLPRTRQVSGCRATAQESRR*GLPAAV
Trigger: GACCGCAGCAGGCAGGCCCCAGCGCCGAGACTCCTG...AGCTGTGGCCCTGCATCCAGATACCTGCCTCGTCCGAGGCAGACACCCCCACCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
3UTR-3UTR CCA 90 bp GGTGGGGGTGTCTGCCTCGGACGAGGCAGGTATCTGGATGCAGGGCCACAGCTGCAGGAGTCTCGGCGCTaGGGCCTGCCTGCTGCGGTC +
Preference number: 2 (lower is better)
Translates to: GGGVCLGRGRYLDAGPQLQESRR*GLPAAV
Trigger: GACCGCAGCAGGCAGGCCCCAGCGCCGAGACTCCTG...CAGCTGTGGCCCTGCATCCAGATACCTGCCTCGTCCGAGGCAGACACCCCCACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
3UTR-3UTR CCA 90 bp GGGTCAGTGAGGCACGGCTCTGCCTCAAGGCCACCCCCTCCTAAGGACACAGGGCAGGAGTCTCGGCGCTaGGGCCTGCCTGCTGCGGTC +
Preference number: 2 (lower is better)
Translates to: GSVRHGSASRPPPPKDTGQESRR*GLPAAV
Trigger: GACCGCAGCAGGCAGGCCCCAGCGCCGAGACTCCTG...CCCTGTGTCCTTAGGAGGGGGTGGCCTTGAGGCAGAGCCGTGCCTCACTGACCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
3UTR-3UTR CCA 90 bp TGGCGCCGAGTGCTGCTCAGGAGGGGACGGTGCGGAGGGTGGGCTGGAGACTCCAGCCCTCCACACACTTaGACCAGCAGTGGGGCTGCC +
Preference number: 2 (lower is better)
Translates to: WRRVLLRRGRCGGWAGDSSPPHT*TSSGAA
Trigger: GGCAGCCCCACTGCTGGTCCAAGTGTGTGGAGGGCT...GGAGTCTCCAGCCCACCCTCCGCACCGTCCCCTCCTGAGCAGCACTCGGCGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
3UTR-3UTR CCA 90 bp CTGTCGGGCACTCAGTTCACCTGCCGGCAGCCGCAGGGCTCCTGGGCCCACAACGGACGGTGCGGAGGGTaGGCTGGAGACTCCAGAGCT +
Preference number: 2 (lower is better)
Translates to: LSGTQFTCRQPQGSWAHNGRCGG*AGDSRA
Trigger: AGCTCTGGAGTCTCCAGCCCACCCTCCGCACCGTCC...GTTGTGGGCCCAGGAGCCCTGCGGCTGCCGGCAGGTGAACTGAGTGCCCGACAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
3UTR-3UTR TCA 90 bp TCGGGCACTCAGTTCACCTGCCGGCAGCCGCAGGGCTCCTGGGCCCACAACTCATGGAGGGTCCTTGGATaGGTCGACGGCAGGCAGCGG +
Preference number: 2 (lower is better)
Translates to: SGTQFTCRQPQGSWAHNSWRVLG*VDGRQR
Trigger: CCGCTGCCTGCCGTCGACTCATCCAAGGACCCTCCA...TGAGTTGTGGGCCCAGGAGCCCTGCGGCTGCCGGCAGGTGAACTGAGTGCCCGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
3UTR-3UTR GCA 90 bp ACAGGGCCAGCACACTCAGCCCTCCACACACTTGGACCAGCAGTGGGGCTGCCCACCCGCGAGGCCCCCTaGCAGGACATCACCTGCCTG +
Preference number: 2 (lower is better)
Translates to: TGPAHSALHTLGPAVGLPTREAP*QDITCL
Trigger: CAGGCAGGTGATGTCCTGGCAGGGGGCCTCGCGGGT...GGGCAGCCCCACTGCTGGTCCAAGTGTGTGGAGGGCTGAGTGTGCTGGCCCTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
3UTR-3UTR GCA 90 bp ATGGGACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGACCCGCGAGGCCCCCTaGCAGGACATCACCTGCCTG +
Preference number: 2 (lower is better)
Translates to: MGRGLWDRCHLSPGVSALTREAP*QDITCL
Trigger: CAGGCAGGTGATGTCCTGGCAGGGGGCCTCGCGGGT...CAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTCCCAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
3UTR-3UTR GCA 90 bp CTGTCGGGCACTCAGTTCACCTGCCGGCAGCCGCAGGGCTCCTGGGCCCACAACGGGCTGTGGGACAGGTaGCACCTGTCACCAGGAGTC +
Preference number: 2 (lower is better)
Translates to: LSGTQFTCRQPQGSWAHNGLWDR*HLSPGV
Trigger: GACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCC...GTTGTGGGCCCAGGAGCCCTGCGGCTGCCGGCAGGTGAACTGAGTGCCCGACAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
3UTR-3UTR GCA 90 bp ACTGCCTACAGAGCTATGCTCAGGACGGGTGGGCGCCGGTCTCAGCTGTCGGGCAGCGGGACCCAGCCCTaGACACACCCGGCCCACATC +
Preference number: 2 (lower is better)
Translates to: TAYRAMLRTGGRRSQLSGSGTQP*THPAHI
Trigger: GATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCGCT...GCCCGACAGCTGAGACCGGCGCCCACCCGTCCTGAGCATAGCTCTGTAGGCAGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
3UTR-3UTR CCA 90 bp GTGGGCGCCGGTCTCAGCTGTCGGGCACTCAGTTCACCTGCCGGCAGCCGCAGGGCCTTGGAGGGTCCTTaGATGAGTCGACGGCAGGCA +
Preference number: 2 (lower is better)
Translates to: VGAGLSCRALSSPAGSRRALEGP*MSRRQA
Trigger: TGCCTGCCGTCGACTCATCCAAGGACCCTCCAAGGC...CCTGCGGCTGCCGGCAGGTGAACTGAGTGCCCGACAGCTGAGACCGGCGCCCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
3UTR-3UTR GCA 90 bp TGGGGGTCAGTGAGGCACGGCTCTGCCTCAAGGCCACCCCCTCCTAAGGACACAACCCGCGAGGCCCCCTaGCAGGACATCACCTGCCTG +
Preference number: 2 (lower is better)
Translates to: WGSVRHGSASRPPPPKDTTREAP*QDITCL
Trigger: CAGGCAGGTGATGTCCTGGCAGGGGGCCTCGCGGGT...TGTGTCCTTAGGAGGGGGTGGCCTTGAGGCAGAGCCGTGCCTCACTGACCCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
3UTR-3UTR GCA 90 bp GTCTGGCCTGCTGCGGGCCAAGTTGGGGCAGGACATACAGCCCATTCCATGGGGGCTGCTGGCGCCGAGTaGTGCTCAGGAGGGGACGGT +
Preference number: 2 (lower is better)
Translates to: VWPAAGQVGAGHTAHSMGAAGAE*CSGGDG
Trigger: ACCGTCCCCTCCTGAGCAGCACTCGGCGCCAGCAGC...CCCCATGGAATGGGCTGTATGTCCTGCCCCAACTTGGCCCGCAGCAGGCCAGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
3UTR-3UTR GCA 90 bp CTGTCGGGCACTCAGTTCACCTGCCGGCAGCCGCAGGGCTCCTGGGCCCACAACAGGCAGGTATCTGGATaGAGGGCCACAGCTGGAGGC +
Preference number: 2 (lower is better)
Translates to: LSGTQFTCRQPQGSWAHNRQVSG*RATAGG
Trigger: GCCTCCAGCTGTGGCCCTGCATCCAGATACCTGCCT...GTTGTGGGCCCAGGAGCCCTGCGGCTGCCGGCAGGTGAACTGAGTGCCCGACAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
3UTR-3UTR CCA 90 bp ACTGCCTACAGAGCTATGCTCAGGACGGGTGGGCGCCGGTCTCAGCTGTCGGGCGTGCGGAGGGTGGGCTaGAGACTCCAGAGCTGGTCC +
Preference number: 2 (lower is better)
Translates to: TAYRAMLRTGGRRSQLSGVRRVG*RLQSWS
Trigger: GGACCAGCTCTGGAGTCTCCAGCCCACCCTCCGCAC...GCCCGACAGCTGAGACCGGCGCCCACCCGTCCTGAGCATAGCTCTGTAGGCAGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
3UTR-3UTR GCA 90 bp GCTGCGGGCCAAGTTGGGGCAGGACATACAGCCCATTCCATGGGGAGGATGAGGGCTGCTGGCGCCGAGTaGTGCTCAGGAGGGGACGGT +
Preference number: 2 (lower is better)
Translates to: AAGQVGAGHTAHSMGRMRAAGAE*CSGGDG
Trigger: ACCGTCCCCTCCTGAGCAGCACTCGGCGCCAGCAGC...CCTCATCCTCCCCATGGAATGGGCTGTATGTCCTGCCCCAACTTGGCCCGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
3UTR-3UTR GCA 90 bp TGGGGGTGTCTGCCTCGGACGAGGCAGGTATCTGGATGCAGGGCCACAGCTGGACACTCTGGCAGAGGCTaGTGGCGCCGAGTGCTGCTC +
Preference number: 2 (lower is better)
Translates to: WGCLPRTRQVSGCRATAGHSGRG*WRRVLL
Trigger: GAGCAGCACTCGGCGCCAGCAGCCTCTGCCAGAGTG...TCCAGCTGTGGCCCTGCATCCAGATACCTGCCTCGTCCGAGGCAGACACCCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
3UTR-3UTR CCA 90 bp GGGGACGGTGCGGAGGGTGGGCTGGAGACTCCAGAGCTGGTCCTGAGTCACAGGCACTTGGACCAGCAGTaGGGCTGCCCCAAGCCTGTT +
Preference number: 2 (lower is better)
Translates to: GDGAEGGLETPELVLSHRHLDQQ*GCPKPV
Trigger: AACAGGCTTGGGGCAGCCCCACTGCTGGTCCAAGTG...CCTGTGACTCAGGACCAGCTCTGGAGTCTCCAGCCCACCCTCCGCACCGTCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
3UTR-3UTR CCA 90 bp GGGTGGGGGTGTCTGCCTCGGACGAGGCAGGTATCTGGATGCAGGGCCACAGCTAGCCCTCCACACACTTaGACCAGCAGTGGGGCTGCC +
Preference number: 2 (lower is better)
Translates to: GWGCLPRTRQVSGCRATASPPHT*TSSGAA
Trigger: GGCAGCCCCACTGCTGGTCCAAGTGTGTGGAGGGCT...AGCTGTGGCCCTGCATCCAGATACCTGCCTCGTCCGAGGCAGACACCCCCACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
3UTR-3UTR TCA 90 bp TGGGGGTGTCTGCCTCGGACGAGGCAGGTATCTGGATGCAGGGCCACAGCTGGACTCCAGAGCTGGTCCTaGGTCACAGGGCCAGCACAC +
Preference number: 2 (lower is better)
Translates to: WGCLPRTRQVSGCRATAGLQSWS*VTGPAH
Trigger: GTGTGCTGGCCCTGTGACTCAGGACCAGCTCTGGAG...TCCAGCTGTGGCCCTGCATCCAGATACCTGCCTCGTCCGAGGCAGACACCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
3UTR-3UTR GCA 90 bp GGGTCAGTGAGGCACGGCTCTGCCTCAAGGCCACCCCCTCCTAAGGACACAGGGAGCGCCAGGACACTATaGAGGCTATGCCCGCACTGC +
Preference number: 2 (lower is better)
Translates to: GSVRHGSASRPPPPKDTGSARTL*RLCPHC
Trigger: GCAGTGCGGGCATAGCCTGCATAGTGTCCTGGCGCT...CCCTGTGTCCTTAGGAGGGGGTGGCCTTGAGGCAGAGCCGTGCCTCACTGACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
3UTR-3UTR CCA 90 bp CTGCACACACCCGGCCCACATCTGATCACACACATGCAGACGCTTGGTCCGGTTCAGGAGTCTCGGCGCTaGGGCCTGCCTGCTGCGGTC +
Preference number: 2 (lower is better)
Translates to: LHTPGPHLITHMQTLGPVQESRR*GLPAAV
Trigger: GACCGCAGCAGGCAGGCCCCAGCGCCGAGACTCCTG...AACCGGACCAAGCGTCTGCATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
3UTR-3UTR CCA 90 bp TGGCGCCGAGTGCTGCTCAGGAGGGGACGGTGCGGAGGGTGGGCTGGAGACTCCATGGTAAGTTCCACATaGGACGAGGGCTGTGGGACA +
Preference number: 2 (lower is better)
Translates to: WRRVLLRRGRCGGWAGDSMVSST*DEGCGT
Trigger: TGTCCCACAGCCCTCGTCCCATGTGGAACTTACCAT...GGAGTCTCCAGCCCACCCTCCGCACCGTCCCCTCCTGAGCAGCACTCGGCGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
3UTR-3UTR CCA 90 bp GGTGGGGGTGTCTGCCTCGGACGAGGCAGGTATCTGGATGCAGGGCCACAGCTGACACCTGCAGGGCTCTaGCTTCCACTCTGGCAGAGG +
Preference number: 2 (lower is better)
Translates to: GGGVCLGRGRYLDAGPQLTPAGL*LPLWQR
Trigger: CCTCTGCCAGAGTGGAAGCCAGAGCCCTGCAGGTGT...CAGCTGTGGCCCTGCATCCAGATACCTGCCTCGTCCGAGGCAGACACCCCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
3UTR-3UTR GCA 90 bp CTGCACACACCCGGCCCACATCTGATCACACACATGCAGACGCTTGGTCCGGTTCTGGGGCCTGCCTGCTaGGGTCCTGGAAGCCCGTCT +
Preference number: 2 (lower is better)
Translates to: LHTPGPHLITHMQTLGPVLGPAC*GPGSPS
Trigger: AGACGGGCTTCCAGGACCGCAGCAGGCAGGCCCCAG...AACCGGACCAAGCGTCTGCATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
3UTR-3UTR GCA 90 bp GGGTCAGTGAGGCACGGCTCTGCCTCAAGGCCACCCCCTCCTAAGGACACAGGGGACCAGCAGTGGGGCTaGCCCAAGCCTGTTTCCTTA +
Preference number: 2 (lower is better)
Translates to: GSVRHGSASRPPPPKDTGDQQWG*PKPVSL
Trigger: TAAGGAAACAGGCTTGGGGCAGCCCCACTGCTGGTC...CCCTGTGTCCTTAGGAGGGGGTGGCCTTGAGGCAGAGCCGTGCCTCACTGACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
3UTR-3UTR CCA 90 bp CGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCACACACATGCAGACGATGGGACGAGGGCTGTaGGACAGGTGCCACCTGTCA +
Preference number: 2 (lower is better)
Translates to: RDPALHTPGPHLITHMQTMGRGL*DRCHLS
Trigger: TGACAGGTGGCACCTGTCCCACAGCCCTCGTCCCAT...CGTCTGCATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
3UTR-3UTR CCA 90 bp ACGGGGAACTCCCAGCGCCAGGACACTATGCAGGCTATGCCCGCACTGCCTACATATGCTCAGGACGGGTaGGCGCCGGTCTCAGCTGTC +
Preference number: 2 (lower is better)
Translates to: TGNSQRQDTMQAMPALPTYAQDG*APVSAV
Trigger: GACAGCTGAGACCGGCGCCCACCCGTCCTGAGCATA...TGTAGGCAGTGCGGGCATAGCCTGCATAGTGTCCTGGCGCTGGGAGTTCCCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
3UTR-3UTR GCA 90 bp GGGTCAGTGAGGCACGGCTCTGCCTCAAGGCCACCCCCTCCTAAGGACACAGGGCCTTCAAGGAGCTGCTaGCTCTCAAGTGCCAGATCC +
Preference number: 2 (lower is better)
Translates to: GSVRHGSASRPPPPKDTGPSRSC*LSSARS
Trigger: GGATCTGGCACTTGAGAGGCAGCAGCTCCTTGAAGG...CCCTGTGTCCTTAGGAGGGGGTGGCCTTGAGGCAGAGCCGTGCCTCACTGACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
3UTR-3UTR CCA 90 bp ACGGGGAACTCCCAGCGCCAGGACACTATGCAGGCTATGCCCGCACTGCCTACAGACGAGGCAGGTATCTaGATGCAGGGCCACAGCTGG +
Preference number: 2 (lower is better)
Translates to: TGNSQRQDTMQAMPALPTDEAGI*MQGHSW
Trigger: CCAGCTGTGGCCCTGCATCCAGATACCTGCCTCGTC...TGTAGGCAGTGCGGGCATAGCCTGCATAGTGTCCTGGCGCTGGGAGTTCCCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
3UTR-3UTR CCA 90 bp GGTGGGGGTGTCTGCCTCGGACGAGGCAGGTATCTGGATGCAGGGCCACAGCTGATGGTAAGTTCCACATaGGACGAGGGCTGTGGGACA +
Preference number: 2 (lower is better)
Translates to: GGGVCLGRGRYLDAGPQLMVSST*DEGCGT
Trigger: TGTCCCACAGCCCTCGTCCCATGTGGAACTTACCAT...CAGCTGTGGCCCTGCATCCAGATACCTGCCTCGTCCGAGGCAGACACCCCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
3UTR-3UTR CCA 90 bp TCAGGAGGGGACGGTGCGGAGGGTGGGCTGGAGACTCCAGAGCTGGTCCTGAGTATGGTAAGTTCCACATaGGACGAGGGCTGTGGGACA +
Preference number: 2 (lower is better)
Translates to: SGGDGAEGGLETPELVLSMVSST*DEGCGT
Trigger: TGTCCCACAGCCCTCGTCCCATGTGGAACTTACCAT...ACTCAGGACCAGCTCTGGAGTCTCCAGCCCACCCTCCGCACCGTCCCCTCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
3UTR CAA 90 bp CCCCAAGCCTGTTTCCTTAATAGTAGCAACACCACACTGCCAGCCTaGGAGGGTCCTTGGATGAGTCGACGGCAGGCAGCGGGACCCAGC +
Preference number: 2 (lower is better)
Translates to: PQACFLNSSNTTLPA*EGPWMSRRQAAGPS
Trigger: GCTGGGTCCCGCTGCCTGCCGTCGACTCATCCAAGGACCCTCCAAGGCTGGCAGTGTGGTGTTGCTACTATTAAGGAAACAGGCTTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
3UTR-3UTR CCA 90 bp AGGCAGCGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCACACACATGATGGTAAGTTCCACATaGGACGAGGGCTGTGGGACA +
Preference number: 2 (lower is better)
Translates to: RQRDPALHTPGPHLITHMMVSST*DEGCGT
Trigger: TGTCCCACAGCCCTCGTCCCATGTGGAACTTACCAT...CATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCGCTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
3UTR-3UTR GCA 90 bp AGACGCTTGGTCCGGTTTCCCTTGCTGAATAGAAACACAATCCCAATGGTAAGTACCCGCGAGGCCCCCTaGCAGGACATCACCTGCCTG +
Preference number: 2 (lower is better)
Translates to: RRLVRFPLLNRNTIPMVSTREAP*QDITCL
Trigger: CAGGCAGGTGATGTCCTGGCAGGGGGCCTCGCGGGT...ACTTACCATTGGGATTGTGTTTCTATTCAGCAAGGGAAACCGGACCAAGCGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
3UTR-3UTR GCA 90 bp TTGCTGAATAGAAACACAATCCCAATGGTAAGTTCCACATGGGACGAGGGCTGTCTGGGGCCTGCCTGCTaGGGTCCTGGAAGCCCGTCT +
Preference number: 2 (lower is better)
Translates to: LLNRNTIPMVSSTWDEGCLGPAC*GPGSPS
Trigger: AGACGGGCTTCCAGGACCGCAGCAGGCAGGCCCCAG...ACAGCCCTCGTCCCATGTGGAACTTACCATTGGGATTGTGTTTCTATTCAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
3UTR-3UTR TCA 90 bp GTAGGACAAAAGTTCACTGTTCACCCAGGCCTAGCTAACACCCAACCGTGCCCAACAAGTCTCGGACTGTaGCCCCCATGTCATGAAGGC +
Preference number: 2 (lower is better)
Translates to: VGQKFTVHPGLANTQPCPTSLGL*PPCHEG
Trigger: GCCTTCATGACATGGGGGTCACAGTCCGAGACTTGT...TGGGCACGGTTGGGTGTTAGCTAGGCCTGGGTGAACAGTGAACTTTTGTCCTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548421.2
3UTR GCA 72 bp GCTTCCACTCTGGCAGAGGCTGCTGGCGCCGAGTGCTaGTCAGGAGGGGACGGTGCGGAGGGTGGGCTGGAG +
Preference number: 3 (lower is better)
Translates to: ASTLAEAAGAEC*SGGDGAEGGLE
Trigger: CTCCAGCCCACCCTCCGCACCGTCCCCTCCTGAGCAGCACTCGGCGCCAGCAGCCTCTGCCAGAGTGGAAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
3UTR CCA 72 bp GCCGCAGGGCTCCTGGGCCCACAACTCAAGTGGCCCTaGAGCAGGGGTCTGACCCCCATGCTGCTCCAGGCG +
Preference number: 3 (lower is better)
Translates to: AAGLLGPQLKWP*SRGLTPMLLQA
Trigger: CGCCTGGAGCAGCATGGGGGTCAGACCCCTGCTCCAGGGCCACTTGAGTTGTGGGCCCAGGAGCCCTGCGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
3UTR CCA 72 bp GGCACTCAGTTCACCTGCCGGCAGCCGCAGGGCTCCTaGGCCCACAACTCAAGTGGCCCTGGAGCAGGGGTC +
Preference number: 3 (lower is better)
Translates to: GTQFTCRQPQGS*AHNSSGPGAGV
Trigger: GACCCCTGCTCCAGGGCCACTTGAGTTGTGGGCCCAGGAGCCCTGCGGCTGCCGGCAGGTGAACTGAGTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
3UTR CCA 72 bp CTACGAGTGGTACTGGGGCCTTCCCACGAAGAGGCCTaGGGAGGCTCTCGGGCCTCCGTCTGCCCTCCCTCC +
Preference number: 3 (lower is better)
Translates to: LRVVLGPSHEEA*GGSRASVCPPS
Trigger: GGAGGGAGGGCAGACGGAGGCCCGAGAGCCTCCCCAGGCCTCTTCGTGGGAAGGCCCCAGTACCACTCGTAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
3UTR GCA 72 bp CACCTGTCACCAGGAGTCTCGGCGCTGGGGCCTGCCTaGTGCGGTCCTGGAAGCCCGTCTGATGCTGAGGAG +
Preference number: 3 (lower is better)
Translates to: HLSPGVSALGPA*CGPGSPSDAEE
Trigger: CTCCTCAGCATCAGACGGGCTTCCAGGACCGCAGCAGGCAGGCCCCAGCGCCGAGACTCCTGGTGACAGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
3UTR TCA 72 bp GCAACACCACACTGCCAGCCTTGGAGGGTCCTTGGATaGGTCGACGGCAGGCAGCGGGACCCAGCCCTGCAC +
Preference number: 3 (lower is better)
Translates to: ATPHCQPWRVLG*VDGRQRDPALH
Trigger: GTGCAGGGCTGGGTCCCGCTGCCTGCCGTCGACTCATCCAAGGACCCTCCAAGGCTGGCAGTGTGGTGTTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
3UTR GCA 72 bp CCCAGCGCCAGGACACTATGCAGGCTATGCCCGCACTaGCTACAGAGCTATGCTCAGGACGGGTGGGCGCCG +
Preference number: 3 (lower is better)
Translates to: PSARTLCRLCPH*LQSYAQDGWAP
Trigger: CGGCGCCCACCCGTCCTGAGCATAGCTCTGTAGGCAGTGCGGGCATAGCCTGCATAGTGTCCTGGCGCTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
3UTR-3UTR CAA 90 bp GTCTGGCCTGCTGCGGGCCAAGTTGGGGCAGGACATACAGCCCATTCCATGGGGCAGCCCTCCACACACTaGGACCAGCAGTGGGGCTGC +
Preference number: 3 (lower is better)
Translates to: VWPAAGQVGAGHTAHSMGQPSTH*DQQWGC
Trigger: GCAGCCCCACTGCTGGTCCAAGTGTGTGGAGGGCTG...CCCCATGGAATGGGCTGTATGTCCTGCCCCAACTTGGCCCGCAGCAGGCCAGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
3UTR GCA 72 bp GGTAAGTTCCACATGGGACGAGGGCTGTGGGACAGGTaGCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCT +
Preference number: 3 (lower is better)
Translates to: GKFHMGRGLWDR*HLSPGVSALGP
Trigger: AGGCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTCCCATGTGGAACTTACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
3UTR CCA 72 bp TGCCCGCACTGCCTACAGAGCTATGCTCAGGACGGGTaGGCGCCGGTCTCAGCTGTCGGGCACTCAGTTCAC +
Preference number: 3 (lower is better)
Translates to: CPHCLQSYAQDG*APVSAVGHSVH
Trigger: GTGAACTGAGTGCCCGACAGCTGAGACCGGCGCCCACCCGTCCTGAGCATAGCTCTGTAGGCAGTGCGGGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
3UTR GCA 72 bp ACTATGCAGGCTATGCCCGCACTGCCTACAGAGCTATaGTCAGGACGGGTGGGCGCCGGTCTCAGCTGTCGG +
Preference number: 3 (lower is better)
Translates to: TMQAMPALPTEL*SGRVGAGLSCR
Trigger: CCGACAGCTGAGACCGGCGCCCACCCGTCCTGAGCATAGCTCTGTAGGCAGTGCGGGCATAGCCTGCATAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
3UTR CCA 72 bp AGTAGCAACACCACACTGCCAGCCTTGGAGGGTCCTTaGATGAGTCGACGGCAGGCAGCGGGACCCAGCCCT +
Preference number: 3 (lower is better)
Translates to: SSNTTLPALEGP*MSRRQAAGPSP
Trigger: AGGGCTGGGTCCCGCTGCCTGCCGTCGACTCATCCAAGGACCCTCCAAGGCTGGCAGTGTGGTGTTGCTACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
3UTR CCA 72 bp AGCCATGCCAGAGCTGAGACCTCCTACGAGTGGTACTaGGGCCTTCCCACGAAGAGGCCTGGGGAGGCTCTC +
Preference number: 3 (lower is better)
Translates to: SHARAETSYEWY*GLPTKRPGEAL
Trigger: GAGAGCCTCCCCAGGCCTCTTCGTGGGAAGGCCCCAGTACCACTCGTAGGAGGTCTCAGCTCTGGCATGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
3UTR-3UTR CAA 90 bp GTCTGGCCTGCTGCGGGCCAAGTTGGGGCAGGACATACAGCCCATTCCATGGGGCACACATGCAGACGCTaGGTCCGGTTTCCCTTGCTG +
Preference number: 3 (lower is better)
Translates to: VWPAAGQVGAGHTAHSMGHTCRR*VRFPLL
Trigger: CAGCAAGGGAAACCGGACCAAGCGTCTGCATGTGTG...CCCCATGGAATGGGCTGTATGTCCTGCCCCAACTTGGCCCGCAGCAGGCCAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
3UTR GCA 72 bp ACACCCAACCGTGCCCAGCATTGGCAGGTGCCCTCCTaGCATGGAGACCCACACTCCCACAAGTCTCGGACT +
Preference number: 3 (lower is better)
Translates to: TPNRAQHWQVPS*HGDPHSHKSRT
Trigger: AGTCCGAGACTTGTGGGAGTGTGGGTCTCCATGGCAGGAGGGCACCTGCCAATGCTGGGCACGGTTGGGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548421.2
3UTR CCA 72 bp AGTCACAGGGCCAGCACACTCAGCCCTCCACACACTTaGACCAGCAGTGGGGCTGCCCCAAGCCTGTTTCCT +
Preference number: 3 (lower is better)
Translates to: SHRASTLSPPHT*TSSGAAPSLFP
Trigger: AGGAAACAGGCTTGGGGCAGCCCCACTGCTGGTCCAAGTGTGTGGAGGGCTGAGTGTGCTGGCCCTGTGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
3UTR-3UTR CAA 90 bp ACGGGGAACTCCCAGCGCCAGGACACTATGCAGGCTATGCCCGCACTGCCTACAACCACACTGCCAGCCTaGGAGGGTCCTTGGATGAGT +
Preference number: 3 (lower is better)
Translates to: TGNSQRQDTMQAMPALPTTTLPA*EGPWMS
Trigger: ACTCATCCAAGGACCCTCCAAGGCTGGCAGTGTGGT...TGTAGGCAGTGCGGGCATAGCCTGCATAGTGTCCTGGCGCTGGGAGTTCCCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
3UTR GCA 72 bp TTCACTGTTCACCCAGGCCTAGCTAACACCCAACCGTaGCCAGCATTGGCAGGTGCCCTCCTGCCATGGAGA +
Preference number: 3 (lower is better)
Translates to: FTVHPGLANTQP*PALAGALLPWR
Trigger: TCTCCATGGCAGGAGGGCACCTGCCAATGCTGGGCACGGTTGGGTGTTAGCTAGGCCTGGGTGAACAGTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548421.2
3UTR CCA 72 bp AATCCCAATGGTAAGTTCCACATGGGACGAGGGCTGTaGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCG +
Preference number: 3 (lower is better)
Translates to: NPNGKFHMGRGL*DRCHLSPGVSA
Trigger: CGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTCCCATGTGGAACTTACCATTGGGATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
3UTR-3UTR CAA 90 bp GACGGCAGGCAGCGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCACATTGGTCCGGTTTCCCTaGCTGAATAGAAACACAATC +
Preference number: 3 (lower is better)
Translates to: DGRQRDPALHTPGPHLITLVRFP*LNRNTI
Trigger: GATTGTGTTTCTATTCAGCAAGGGAAACCGGACCAA...TGTGATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCGCTGCCTGCCGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
3UTR-3UTR CAA 90 bp ACTGCCTACAGAGCTATGCTCAGGACGGGTGGGCGCCGGTCTCAGCTGTCGGGCTTGGTCCGGTTTCCCTaGCTGAATAGAAACACAATC +
Preference number: 3 (lower is better)
Translates to: TAYRAMLRTGGRRSQLSGLVRFP*LNRNTI
Trigger: GATTGTGTTTCTATTCAGCAAGGGAAACCGGACCAA...GCCCGACAGCTGAGACCGGCGCCCACCCGTCCTGAGCATAGCTCTGTAGGCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
3UTR-3UTR CAA 90 bp TGGGGGTGTCTGCCTCGGACGAGGCAGGTATCTGGATGCAGGGCCACAGCTGGATTGGTCCGGTTTCCCTaGCTGAATAGAAACACAATC +
Preference number: 3 (lower is better)
Translates to: WGCLPRTRQVSGCRATAGLVRFP*LNRNTI
Trigger: GATTGTGTTTCTATTCAGCAAGGGAAACCGGACCAA...TCCAGCTGTGGCCCTGCATCCAGATACCTGCCTCGTCCGAGGCAGACACCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
3UTR CCA 72 bp CAGCACACTCAGCCCTCCACACACTTGGACCAGCAGTaGGGCTGCCCCAAGCCTGTTTCCTTAATAGTAGCA +
Preference number: 3 (lower is better)
Translates to: QHTQPSTHLDQQ*GCPKPVSLIVA
Trigger: TGCTACTATTAAGGAAACAGGCTTGGGGCAGCCCCACTGCTGGTCCAAGTGTGTGGAGGGCTGAGTGTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
3UTR GCA 72 bp ACTCAGCCCTCCACACACTTGGACCAGCAGTGGGGCTaGCCCAAGCCTGTTTCCTTAATAGTAGCAACACCA +
Preference number: 3 (lower is better)
Translates to: TQPSTHLDQQWG*PKPVSLIVATP
Trigger: TGGTGTTGCTACTATTAAGGAAACAGGCTTGGGGCAGCCCCACTGCTGGTCCAAGTGTGTGGAGGGCTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
3UTR CCA 72 bp CTGAATAGAAACACAATCCCAATGGTAAGTTCCACATaGGACGAGGGCTGTGGGACAGGTGCCACCTGTCAC +
Preference number: 3 (lower is better)
Translates to: LNRNTIPMVSST*DEGCGTGATCH
Trigger: GTGACAGGTGGCACCTGTCCCACAGCCCTCGTCCCATGTGGAACTTACCATTGGGATTGTGTTTCTATTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR TCA 90 bp GGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCTGCCCCCCGCCGGCGCTGCTaGGGCCCCGGAGCACGCTAT +
Preference number: 4 (lower is better)
Translates to: GLWDRCHLSPGVSALGPAPRRRC*GPGARY
Trigger: ATAGCGTGCTCCGGGGCCTCAGCAGCGCCGGCGGGG...GGCAGGCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCC
74% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR TCA 90 bp GACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCCCCGCCGGCGCTGCTaGGGCCCCGGAGCACGCTAT +
Preference number: 4 (lower is better)
Translates to: DEGCGTGATCHQESRRWGPRRRC*GPGARY
Trigger: ATAGCGTGCTCCGGGGCCTCAGCAGCGCCGGCGGGG...GCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR TCA 90 bp ACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCCCCCGCCGGCGCTGCTaGGGCCCCGGAGCACGCTAT +
Preference number: 4 (lower is better)
Translates to: TRAVGQVPPVTRSLGAGAPRRRC*GPGARY
Trigger: ATAGCGTGCTCCGGGGCCTCAGCAGCGCCGGCGGGG...GGCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGT
73% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR TCA 90 bp GGACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCCCGCCGGCGCTGCTaGGGCCCCGGAGCACGCTAT +
Preference number: 4 (lower is better)
Translates to: GRGLWDRCHLSPGVSALGPRRRC*GPGARY
Trigger: ATAGCGTGCTCCGGGGCCTCAGCAGCGCCGGCGGGG...CCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp GGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCTGCCGCGCTGGGGCCTGCCTaGTGCGGTCCTGGAAGCCCG +
Preference number: 4 (lower is better)
Translates to: GLWDRCHLSPGVSALGPAALGPA*CGPGSP
Trigger: CGGGCTTCCAGGACCGCAGCAGGCAGGCCCCAGCGC...GGCAGGCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp GGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCTGCCAGCGCGCGGTGGAGATaGCCTGTCCTGCGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: GLWDRCHLSPGVSALGPASARWR*PVLRGG
Trigger: CCCGCCCCGCAGGACAGGGCATCTCCACCGCGCGCT...GGCAGGCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440513.7
CDS-3UTR TCA 90 bp TCGGGCACTCAGTTCACCTGCCGGCAGCCGCAGGGCTCCTGGGCCCACAACTCACCCCGCCGGCGCTGCTaGGGCCCCGGAGCACGCTAT +
Preference number: 4 (lower is better)
Translates to: SGTQFTCRQPQGSWAHNSPRRRC*GPGARY
Trigger: ATAGCGTGCTCCGGGGCCTCAGCAGCGCCGGCGGGG...TGAGTTGTGGGCCCAGGAGCCCTGCGGCTGCCGGCAGGTGAACTGAGTGCCCGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp GTCGACGGCAGGCAGCGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCCCAGGGCCGGAGGTCTaGCGCCCCACTCGGGGCTTC +
Preference number: 4 (lower is better)
Translates to: VDGRQRDPALHTPGPHLIPGPEV*RPTRGF
Trigger: GAAGCCCCGAGTGGGGCGGCAGACCTCCGGCCCTGG...GATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCGCTGCCTGCCGTCGAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp GACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCCAGGGCCGGAGGTCTaGCGCCCCACTCGGGGCTTC +
Preference number: 4 (lower is better)
Translates to: DEGCGTGATCHQESRRWGPGPEV*RPTRGF
Trigger: GAAGCCCCGAGTGGGGCGGCAGACCTCCGGCCCTGG...GCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp GACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCGCGCTGGGGCCTGCCTaGTGCGGTCCTGGAAGCCCG +
Preference number: 4 (lower is better)
Translates to: DEGCGTGATCHQESRRWGALGPA*CGPGSP
Trigger: CGGGCTTCCAGGACCGCAGCAGGCAGGCCCCAGCGC...GCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCTGCCTGTCAGACCTCGGCCTaGGAGCGACCCCCGGCGCAC +
Preference number: 4 (lower is better)
Translates to: GLWDRCHLSPGVSALGPACQTSA*ERPPAH
Trigger: GTGCGCCGGGGGTCGCTCCCAGGCCGAGGTCTGACA...GGCAGGCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327359.7
ENST00000440513.7
CDS-3UTR CCA 90 bp GGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCTGCCCCAGGCTGGCTGCAGTaGGGAGGGGGTCCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: GLWDRCHLSPGVSALGPAPGWLQ*GGGPAG
Trigger: CCCTGCTGGACCCCCTCCCCACTGCAGCCAGCCTGG...GGCAGGCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR TCA 90 bp ACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCCGGTGCCGGCCGGGGTaGCGAGGGTGCTTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: TRAVGQVPPVTRSLGAGARCRPG*RGCFLS
Trigger: AGAGAGGAAGCACCCTCGTCACCCCGGCCGGCACCG...GGCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327359.7
ENST00000440513.7
CDS-3UTR GCA 90 bp GGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCTGCCCGGCCGCGGGTCAGGTaGCTGCTCACGGCCATCTTG +
Preference number: 4 (lower is better)
Translates to: GLWDRCHLSPGVSALGPARPRVR*LLTAIL
Trigger: CAAGATGGCCGTGAGCAGGCACCTGACCCGCGGCCG...GGCAGGCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000440513.7
ENST00000547530.7
CDS-3UTR GCA 90 bp AGGACACAGGGTGAAGCCCCCTCGGCCACATCCGGGGCAGCCATGCCAGAGCTGCCAGGGCCGGAGGTCTaGCGCCCCACTCGGGGCTTC +
Preference number: 4 (lower is better)
Translates to: RTQGEAPSATSGAAMPELPGPEV*RPTRGF
Trigger: GAAGCCCCGAGTGGGGCGGCAGACCTCCGGCCCTGG...CAGCTCTGGCATGGCTGCCCCGGATGTGGCCGAGGGGGCTTCACCCTGTGTCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp GGGAGGATGAGGCCCCTGGGGGTCAGTGAGGCACGGCTCTGCCTCAAGGCCACCGCTGGCGCCGAGTGCTaGTCAGGAGGGGACGGTGCG +
Preference number: 4 (lower is better)
Translates to: GRMRPLGVSEARLCLKATAGAEC*SGGDGA
Trigger: CGCACCGTCCCCTCCTGAGCAGCACTCGGCGCCAGC...GGTGGCCTTGAGGCAGAGCCGTGCCTCACTGACCCCCAGGGGCCTCATCCTCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp AGGATGAGGCCCCTGGGGGTCAGTGAGGCACGGCTCTGCCTCAAGGCCACCCCCTCTCGGGCCTCCGTCTaGCCTCCCTCCTCGGAGGGG +
Preference number: 4 (lower is better)
Translates to: RMRPLGVSEARLCLKATPSRASV*PPSSEG
Trigger: CCCCTCCGAGGAGGGAGGGCAGACGGAGGCCCGAGA...GGGGGTGGCCTTGAGGCAGAGCCGTGCCTCACTGACCCCCAGGGGCCTCATCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000379932.8
CDS-3UTR GCA 90 bp GCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCTGCCTGGGAGATGCCCTGTCCTaGGGGGCGGGGTCGTCCTCG +
Preference number: 4 (lower is better)
Translates to: AVGQVPPVTRSLGAGACLGDALS*GAGSSS
Trigger: CGAGGACGACCCCGCCCCGCAGGACAGGGCATCTCC...CAGGCAGGCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000440513.7
CDS-3UTR CCA 90 bp ACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCCCAGGCTGGCTGCAGTaGGGAGGGGGTCCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: TRAVGQVPPVTRSLGAGAPGWLQ*GGGPAG
Trigger: CCCTGCTGGACCCCCTCCCCACTGCAGCCAGCCTGG...GGCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCTGCCTCCACCAGCACCGCCTaGGGCCTGGCAGGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: GLWDRCHLSPGVSALGPASTSTA*GLAGSA
Trigger: AGCTGAGCCTGCCAGGCCCCAGGCGGTGCTGGTGGA...GGCAGGCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCAGGAGTCTCGGCGCTaGGGCCTGCCTGCTGCGGTC +
Preference number: 4 (lower is better)
Translates to: DEGCGTGATCHQESRRWGQESRR*GLPAAV
Trigger: GACCGCAGCAGGCAGGCCCCAGCGCCGAGACTCCTG...GCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp ACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCCAGGAGTCTCGGCGCTaGGGCCTGCCTGCTGCGGTC +
Preference number: 4 (lower is better)
Translates to: TRAVGQVPPVTRSLGAGAQESRR*GLPAAV
Trigger: GACCGCAGCAGGCAGGCCCCAGCGCCGAGACTCCTG...GGCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GGACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCGTCCAGCGCGCGGTaGAGATGCCCTGTCCTGCGG +
Preference number: 4 (lower is better)
Translates to: GRGLWDRCHLSPGVSALGPSSAR*RCPVLR
Trigger: CCGCAGGACAGGGCATCTCCACCGCGCGCTGGACGG...CCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440513.7
CDS-3UTR CCA 90 bp GCCCGTCTGATGCTGAGGAGACCCGCGAGGCCCCCTGCCAGGACATCACCTGCCTGCCCGCCCACAAGGTaGGTAGCGGCGGCCCCTCTC +
Preference number: 4 (lower is better)
Translates to: ARLMLRRPARPPARTSPACPPTR*VAAAPL
Trigger: GAGAGGGGCCGCCGCTACCCACCTTGTGGGCGGGCA...GGCAGGTGATGTCCTGGCAGGGGGCCTCGCGGGTCTCCTCAGCATCAGACGGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000446501.6
CDS-3UTR TCA 90 bp AGCCCGTCTGATGCTGAGGAGACCCGCGAGGCCCCCTGCCAGGACATCACCTGCCGGTGCCGGCCGGGGTaGCGAGGGTGCTTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: SPSDAEETREAPCQDITCRCRPG*RGCFLS
Trigger: AGAGAGGAAGCACCCTCGTCACCCCGGCCGGCACCG...GCAGGTGATGTCCTGGCAGGGGGCCTCGCGGGTCTCCTCAGCATCAGACGGGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327359.7
ENST00000440513.7
CDS-3UTR TCA 90 bp CAGGCAGCGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCACACACATCCCCGCCGGCGCTGCTaGGGCCCCGGAGCACGCTAT +
Preference number: 4 (lower is better)
Translates to: QAAGPSPAHTRPTSDHTHPRRRC*GPGARY
Trigger: ATAGCGTGCTCCGGGGCCTCAGCAGCGCCGGCGGGG...ATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCGCTGCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR TCA 90 bp GCCCGTCTGATGCTGAGGAGACCCGCGAGGCCCCCTGCCAGGACATCACCTGCCCTCGTCGGCGTGGTATaGCACGGGCCCGCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: ARLMLRRPARPPARTSPALVGVV*HGPALH
Trigger: GTGGAGAGCGGGCCCGTGTCATACCACGCCGACGAG...GGCAGGTGATGTCCTGGCAGGGGGCCTCGCGGGTCTCCTCAGCATCAGACGGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR TCA 90 bp GACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCTCGTCGGCGTGGTATaGCACGGGCCCGCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: DEGCGTGATCHQESRRWGLVGVV*HGPALH
Trigger: GTGGAGAGCGGGCCCGTGTCATACCACGCCGACGAG...GCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR TCA 90 bp GCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCTGCCTGCTCGTCGGCGTGGTATaGCACGGGCCCGCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: AVGQVPPVTRSLGAGACLLVGVV*HGPALH
Trigger: GTGGAGAGCGGGCCCGTGTCATACCACGCCGACGAG...CAGGCAGGCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR TCA 90 bp GGGAGGATGAGGCCCCTGGGGGTCAGTGAGGCACGGCTCTGCCTCAAGGCCACCGCCCCTGGGGGTCAGTaGGGCACGGCTCTGCCTCAA +
Preference number: 4 (lower is better)
Translates to: GRMRPLGVSEARLCLKATAPGGQ*GTALPQ
Trigger: TTGAGGCAGAGCCGTGCCTCACTGACCCCCAGGGGC...GGTGGCCTTGAGGCAGAGCCGTGCCTCACTGACCCCCAGGGGCCTCATCCTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000379932.8
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
ENST00000551787.5
CDS-3UTR TCA 90 bp ACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCGCCCCTGGGGGTCAGTaGGGCACGGCTCTGCCTCAA +
Preference number: 4 (lower is better)
Translates to: TRAVGQVPPVTRSLGAGAAPGGQ*GTALPQ
Trigger: TTGAGGCAGAGCCGTGCCTCACTGACCCCCAGGGGC...GGCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR TCA 90 bp GCCAGCCTTGGAGGGTCCTTGGATGAGTCGACGGCAGGCAGCGGGACCCAGCCCACCCAGGCTGGCTACTaGGCTCTGGGCGGGGGTAGG +
Preference number: 4 (lower is better)
Translates to: ASLGGSLDESTAGSGTQPTQAGY*ALGGGR
Trigger: CCTACCCCCGCCCAGAGCTCAGTAGCCAGCCTGGGT...GGGCTGGGTCCCGCTGCCTGCCGTCGACTCATCCAAGGACCCTCCAAGGCTGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR TCA 90 bp GACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCACCCAGGCTGGCTACTaGGCTCTGGGCGGGGGTAGG +
Preference number: 4 (lower is better)
Translates to: DEGCGTGATCHQESRRWGTQAGY*ALGGGR
Trigger: CCTACCCCCGCCCAGAGCTCAGTAGCCAGCCTGGGT...GCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR TCA 90 bp AGCCCGTCTGATGCTGAGGAGACCCGCGAGGCCCCCTGCCAGGACATCACCTGCCGTCCGCCGTGTGGCTaGCACGCAGCCTGCGGGAGA +
Preference number: 4 (lower is better)
Translates to: SPSDAEETREAPCQDITCRPPCG*HAACGR
Trigger: TCTCCCGCAGGCTGCGTGTCAGCCACACGGCGGACG...GCAGGTGATGTCCTGGCAGGGGGCCTCGCGGGTCTCCTCAGCATCAGACGGGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000446501.6
CDS-3UTR TCA 90 bp CTCCTAAGGACACAGGGTGAAGCCCCCTCGGCCACATCCGGGGCAGCCATGCCAAGCGGGGCCTACCGGTaGGCGCAGCCGAGGACTGGC +
Preference number: 4 (lower is better)
Translates to: LLRTQGEAPSATSGAAMPSGAYR*AQPRTG
Trigger: GCCAGTCCTCGGCTGCGCTCACCGGTAGGCCCCGCT...TGGCATGGCTGCCCCGGATGTGGCCGAGGGGGCTTCACCCTGTGTCCTTAGGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000547530.7
CDS-3UTR GCA 90 bp GGACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCGCACCTGCACACCTaGCTCAATGCGGTGCCGGCC +
Preference number: 4 (lower is better)
Translates to: GRGLWDRCHLSPGVSALGPHLHT*LNAVPA
Trigger: GGCCGGCACCGCATTGAGGCAGGTGTGCAGGTGCGG...CCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327359.7
ENST00000440513.7
CDS-3UTR GCA 90 bp ACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCCGGCCGCGGGTCAGGTaGCTGCTCACGGCCATCTTG +
Preference number: 4 (lower is better)
Translates to: TRAVGQVPPVTRSLGAGARPRVR*LLTAIL
Trigger: CAAGATGGCCGTGAGCAGGCACCTGACCCGCGGCCG...GGCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000440513.7
ENST00000547530.7
CDS-3UTR GCA 90 bp CTCAGGACGGGTGGGCGCCGGTCTCAGCTGTCGGGCACTCAGTTCACCTGCCGGCGGCCGCGGGTCAGGTaGCTGCTCACGGCCATCTTG +
Preference number: 4 (lower is better)
Translates to: LRTGGRRSQLSGTQFTCRRPRVR*LLTAIL
Trigger: CAAGATGGCCGTGAGCAGGCACCTGACCCGCGGCCG...CCGGCAGGTGAACTGAGTGCCCGACAGCTGAGACCGGCGCCCACCCGTCCTGAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379937.6
ENST00000547530.7
CDS-3UTR GCA 90 bp GGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCTGCCGGGCGCCGGCCTGTGTaGATCCAGTCCCGCTTCATC +
Preference number: 4 (lower is better)
Translates to: GLWDRCHLSPGVSALGPAGRRPV*IQSRFI
Trigger: GATGAAGCGGGACTGGATGCACACAGGCCGGCGCCC...GGCAGGCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000547530.7
CDS-3UTR GCA 90 bp AGTCGACGGCAGGCAGCGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCTCGGGGCTTCCTGCTaGTTCCGAGCTGCCGGGGGC +
Preference number: 4 (lower is better)
Translates to: SRRQAAGPSPAHTRPTSDLGASC*FRAAGG
Trigger: GCCCCCGGCAGCTCGGAAGCAGCAGGAAGCCCCGAG...ATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCGCTGCCTGCCGTCGACT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp TGCTGCTCAGGAGGGGACGGTGCGGAGGGTGGGCTGGAGACTCCAGAGCTGGTCCTCGGGGCTTCCTGCTaGTTCCGAGCTGCCGGGGGC +
Preference number: 4 (lower is better)
Translates to: CCSGGDGAEGGLETPELVLGASC*FRAAGG
Trigger: GCCCCCGGCAGCTCGGAAGCAGCAGGAAGCCCCGAG...GACCAGCTCTGGAGTCTCCAGCCCACCCTCCGCACCGTCCCCTCCTGAGCAGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp ACGGCTCTGCCTCAAGGCCACCCCCTCCTAAGGACACAGGGTGAAGCCCCCTCGCCAGGGCCGGAGGTCTaGCGCCCCACTCGGGGCTTC +
Preference number: 4 (lower is better)
Translates to: TALPQGHPLLRTQGEAPSPGPEV*RPTRGF
Trigger: GAAGCCCCGAGTGGGGCGGCAGACCTCCGGCCCTGG...CGAGGGGGCTTCACCCTGTGTCCTTAGGAGGGGGTGGCCTTGAGGCAGAGCCGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp TGGGACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGTGTGCATCCTCCCTGTaGGGACTGCCCCCGCCGGCG +
Preference number: 4 (lower is better)
Translates to: WDEGCGTGATCHQESRRWCASSL*GLPPPA
Trigger: CGCCGGCGGGGGCAGTCCGCACAGGGAGGATGCACA...CCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTCCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp AGCCCGTCTGATGCTGAGGAGACCCGCGAGGCCCCCTGCCAGGACATCACCTGCTGTGCATCCTCCCTGTaGGGACTGCCCCCGCCGGCG +
Preference number: 4 (lower is better)
Translates to: SPSDAEETREAPCQDITCCASSL*GLPPPA
Trigger: CGCCGGCGGGGGCAGTCCGCACAGGGAGGATGCACA...GCAGGTGATGTCCTGGCAGGGGGCCTCGCGGGTCTCCTCAGCATCAGACGGGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp GCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCTGCCTGACCCGCGAGGCCCCCTaGCAGGACATCACCTGCCTG +
Preference number: 4 (lower is better)
Translates to: AVGQVPPVTRSLGAGACLTREAP*QDITCL
Trigger: CAGGCAGGTGATGTCCTGGCAGGGGGCCTCGCGGGT...CAGGCAGGCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp AGGATGAGGCCCCTGGGGGTCAGTGAGGCACGGCTCTGCCTCAAGGCCACCCCCACCCGCGAGGCCCCCTaGCAGGACATCACCTGCCTG +
Preference number: 4 (lower is better)
Translates to: RMRPLGVSEARLCLKATPTREAP*QDITCL
Trigger: CAGGCAGGTGATGTCCTGGCAGGGGGCCTCGCGGGT...GGGGGTGGCCTTGAGGCAGAGCCGTGCCTCACTGACCCCCAGGGGCCTCATCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp GACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCTGGGGCCTGCCTGCTaGGGTCCTGGAAGCCCGTCT +
Preference number: 4 (lower is better)
Translates to: DEGCGTGATCHQESRRWGLGPAC*GPGSPS
Trigger: AGACGGGCTTCCAGGACCGCAGCAGGCAGGCCCCAG...GCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp ACGGCTCTGCCTCAAGGCCACCCCCTCCTAAGGACACAGGGTGAAGCCCCCTCGGCGCTGGGGCCTGCCTaGTGCGGTCCTGGAAGCCCG +
Preference number: 4 (lower is better)
Translates to: TALPQGHPLLRTQGEAPSALGPA*CGPGSP
Trigger: CGGGCTTCCAGGACCGCAGCAGGCAGGCCCCAGCGC...CGAGGGGGCTTCACCCTGTGTCCTTAGGAGGGGGTGGCCTTGAGGCAGAGCCGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp ACATGGGACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCGCGCTGGGGCCTGCCTaGTGCGGTCCTGGAAGCCCG +
Preference number: 4 (lower is better)
Translates to: TWDEGCGTGATCHQESRRALGPA*CGPGSP
Trigger: CGGGCTTCCAGGACCGCAGCAGGCAGGCCCCAGCGC...GCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTCCCATGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp GCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCTGCCTGAGCGGGACCCAGCCCTaGACACACCCGGCCCACATC +
Preference number: 4 (lower is better)
Translates to: AVGQVPPVTRSLGAGACLSGTQP*THPAHI
Trigger: GATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCGCT...CAGGCAGGCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp GACGGCAGGCAGCGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCACAGCTGGCGCCGAGTGCTaGTCAGGAGGGGACGGTGCG +
Preference number: 4 (lower is better)
Translates to: DGRQRDPALHTPGPHLITAGAEC*SGGDGA
Trigger: CGCACCGTCCCCTCCTGAGCAGCACTCGGCGCCAGC...TGTGATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCGCTGCCTGCCGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp ACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCGCTGCTGGCGCCGAGTaGTGCTCAGGAGGGGACGGT +
Preference number: 4 (lower is better)
Translates to: TRAVGQVPPVTRSLGAGAAAGAE*CSGGDG
Trigger: ACCGTCCCCTCCTGAGCAGCACTCGGCGCCAGCAGC...GGCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp GTGGGCGCCGGTCTCAGCTGTCGGGCACTCAGTTCACCTGCCGGCAGCCGCAGGCACTCTGGCAGAGGCTaGTGGCGCCGAGTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: VGAGLSCRALSSPAGSRRHSGRG*WRRVLL
Trigger: GAGCAGCACTCGGCGCCAGCAGCCTCTGCCAGAGTG...CCTGCGGCTGCCGGCAGGTGAACTGAGTGCCCGACAGCTGAGACCGGCGCCCAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp TGGGACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGCTCAGCTCCCACGGCTaGGCCGGACACCTGCAGGGC +
Preference number: 4 (lower is better)
Translates to: WDEGCGTGATCHQESRRWLSSHG*AGHLQG
Trigger: GCCCTGCAGGTGTCCGGCGCAGCCGTGGGAGCTGAG...CCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTCCCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp TGCTGCTCAGGAGGGGACGGTGCGGAGGGTGGGCTGGAGACTCCAGAGCTGGTCCTCAGCTCCCACGGCTaGGCCGGACACCTGCAGGGC +
Preference number: 4 (lower is better)
Translates to: CCSGGDGAEGGLETPELVLSSHG*AGHLQG
Trigger: GCCCTGCAGGTGTCCGGCGCAGCCGTGGGAGCTGAG...GACCAGCTCTGGAGTCTCCAGCCCACCCTCCGCACCGTCCCCTCCTGAGCAGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp CTCAGGACGGGTGGGCGCCGGTCTCAGCTGTCGGGCACTCAGTTCACCTGCCGGGGCACTCAGTTCACCTaGCGGCAGCCGCAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: LRTGGRRSQLSGTQFTCRGTQFT*RQPQGS
Trigger: GGAGCCCTGCGGCTGCCGGCAGGTGAACTGAGTGCC...CCGGCAGGTGAACTGAGTGCCCGACAGCTGAGACCGGCGCCCACCCGTCCTGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp GGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCTGCCGACAGGGAGCGCCACTaGCCTCTGGCTCTGTCCACG +
Preference number: 4 (lower is better)
Translates to: GLWDRCHLSPGVSALGPADRERH*PLALST
Trigger: CGTGGACAGAGCCAGAGGGCAGTGGCGCTCCCTGTC...GGCAGGCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp GCCAGCCTTGGAGGGTCCTTGGATGAGTCGACGGCAGGCAGCGGGACCCAGCCCCCAGCTCGATGTCCGTaGCGCCGCAACCGCGGCACA +
Preference number: 4 (lower is better)
Translates to: ASLGGSLDESTAGSGTQPPARCP*RRNRGT
Trigger: TGTGCCGCGGTTGCGGCGGCACGGACATCGAGCTGG...GGGCTGGGTCCCGCTGCCTGCCGTCGACTCATCCAAGGACCCTCCAAGGCTGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379937.6
ENST00000547530.7
CDS-3UTR GCA 90 bp AGGACACAGGGTGAAGCCCCCTCGGCCACATCCGGGGCAGCCATGCCAGAGCTGCCGCGACCTCCCCACTaGGAGCGAGCTGGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: RTQGEAPSATSGAAMPELPRPPH*ERAGLP
Trigger: AGGGAGGCCAGCTCGCTCGCAGTGGGGAGGTCGCGG...CAGCTCTGGCATGGCTGCCCCGGATGTGGCCGAGGGGGCTTCACCCTGTGTCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000547530.7
CDS-3UTR CCA 90 bp GACGGCAGGCAGCGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCACACCAGGCTGGCTGCAGTaGGGAGGGGGTCCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: DGRQRDPALHTPGPHLITPGWLQ*GGGPAG
Trigger: CCCTGCTGGACCCCCTCCCCACTGCAGCCAGCCTGG...TGTGATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCGCTGCCTGCCGTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp TGGGACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGCCAGGCTGGCTGCAGTaGGGAGGGGGTCCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: WDEGCGTGATCHQESRRWPGWLQ*GGGPAG
Trigger: CCCTGCTGGACCCCCTCCCCACTGCAGCCAGCCTGG...CCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTCCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp AGGATGAGGCCCCTGGGGGTCAGTGAGGCACGGCTCTGCCTCAAGGCCACCCCCGCCTCCTCGTCGGCGTaGTATGACACGGGCCCGCTC +
Preference number: 4 (lower is better)
Translates to: RMRPLGVSEARLCLKATPASSSA*YDTGPL
Trigger: GAGCGGGCCCGTGTCATACCACGCCGACGAGGAGGC...GGGGGTGGCCTTGAGGCAGAGCCGTGCCTCACTGACCCCCAGGGGCCTCATCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GCCAGCCTTGGAGGGTCCTTGGATGAGTCGACGGCAGGCAGCGGGACCCAGCCCGCCTCCTCGTCGGCGTaGTATGACACGGGCCCGCTC +
Preference number: 4 (lower is better)
Translates to: ASLGGSLDESTAGSGTQPASSSA*YDTGPL
Trigger: GAGCGGGCCCGTGTCATACCACGCCGACGAGGAGGC...GGGCTGGGTCCCGCTGCCTGCCGTCGACTCATCCAAGGACCCTCCAAGGCTGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp AGGATGAGGCCCCTGGGGGTCAGTGAGGCACGGCTCTGCCTCAAGGCCACCCCCTCCCACGAAGAGGCCTaGGGAGGCTCTCGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: RMRPLGVSEARLCLKATPSHEEA*GGSRAS
Trigger: GGAGGCCCGAGAGCCTCCCCAGGCCTCTTCGTGGGA...GGGGGTGGCCTTGAGGCAGAGCCGTGCCTCACTGACCCCCAGGGGCCTCATCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000379932.8
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
ENST00000551787.5
CDS-3UTR CCA 90 bp GGGAGGATGAGGCCCCTGGGGGTCAGTGAGGCACGGCTCTGCCTCAAGGCCACCTCCCACGAAGAGGCCTaGGGAGGCTCTCGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: GRMRPLGVSEARLCLKATSHEEA*GGSRAS
Trigger: GGAGGCCCGAGAGCCTCCCCAGGCCTCTTCGTGGGA...GGTGGCCTTGAGGCAGAGCCGTGCCTCACTGACCCCCAGGGGCCTCATCCTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000379932.8
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
ENST00000551787.5
CDS-3UTR CCA 90 bp CTCAGGACGGGTGGGCGCCGGTCTCAGCTGTCGGGCACTCAGTTCACCTGCCGGTCCCACGAAGAGGCCTaGGGAGGCTCTCGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: LRTGGRRSQLSGTQFTCRSHEEA*GGSRAS
Trigger: GGAGGCCCGAGAGCCTCCCCAGGCCTCTTCGTGGGA...CCGGCAGGTGAACTGAGTGCCCGACAGCTGAGACCGGCGCCCACCCGTCCTGAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp ATGGGACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGCCACTGCGAGCGAGCTaGCCTCCCTTGCGGCGCGCC +
Preference number: 4 (lower is better)
Translates to: MGRGLWDRCHLSPGVSALPLRAS*PPLRRA
Trigger: GGCGCGCCGCAAGGGAGGCCAGCTCGCTCGCAGTGG...CAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTCCCAT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547530.7
CDS-3UTR CCA 90 bp GGCACGGCTCTGCCTCAAGGCCACCCCCTCCTAAGGACACAGGGTGAAGCCCCCGCCCTCCCTCCTCGATaGGGGGCCTTTGGCCGGCTG +
Preference number: 4 (lower is better)
Translates to: GTALPQGHPLLRTQGEAPALPPR*GAFGRL
Trigger: CAGCCGGCCAAAGGCCCCCCATCGAGGAGGGAGGGC...GGGGGCTTCACCCTGTGTCCTTAGGAGGGGGTGGCCTTGAGGCAGAGCCGTGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000551787.5
CDS-3UTR TCA 90 bp AGGATGAGGCCCCTGGGGGTCAGTGAGGCACGGCTCTGCCTCAAGGCCACCCCCCCTGGAGCAGGTCGCTaGGGTCCAGGAGCATGTGCG +
Preference number: 4 (lower is better)
Translates to: RMRPLGVSEARLCLKATPPGAGR*GPGACA
Trigger: CGCACATGCTCCTGGACCTCAGCGACCTGCTCCAGG...GGGGGTGGCCTTGAGGCAGAGCCGTGCCTCACTGACCCCCAGGGGCCTCATCCT
69% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000379937.6
ENST00000547530.7
CDS-3UTR TCA 90 bp GTGGGCGCCGGTCTCAGCTGTCGGGCACTCAGTTCACCTGCCGGCAGCCGCAGGCTGGCGGTACTGGCCTaGATTGGCTCCCGTCGCTTG +
Preference number: 4 (lower is better)
Translates to: VGAGLSCRALSSPAGSRRLAVLA*IGSRRL
Trigger: CAAGCGACGGGAGCCAATTCAGGCCAGTACCGCCAG...CCTGCGGCTGCCGGCAGGTGAACTGAGTGCCCGACAGCTGAGACCGGCGCCCAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR TCA 90 bp GGGAGGATGAGGCCCCTGGGGGTCAGTGAGGCACGGCTCTGCCTCAAGGCCACCCGGCGTCCTCCTTCGTaGCAGCTTCCTGGCACTGGC +
Preference number: 4 (lower is better)
Translates to: GRMRPLGVSEARLCLKATRRPPS*QLPGTG
Trigger: GCCAGTGCCAGGAAGCTGTCACGAAGGAGGACGCCG...GGTGGCCTTGAGGCAGAGCCGTGCCTCACTGACCCCCAGGGGCCTCATCCTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR TCA 90 bp TGGGACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGCTCGTCGGCGTGGTATaGCACGGGCCCGCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: WDEGCGTGATCHQESRRWLVGVV*HGPALH
Trigger: GTGGAGAGCGGGCCCGTGTCATACCACGCCGACGAG...CCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTCCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR TCA 90 bp ACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCTCATCTGCAGGGCACTaGCGCAGGGCTCCCCGTCCT +
Preference number: 4 (lower is better)
Translates to: TRAVGQVPPVTRSLGAGASSAGH*RRAPRP
Trigger: AGGACGGGGAGCCCTGCGTCAGTGCCCTGCAGATGA...GGCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR TCA 90 bp CGACGGCAGGCAGCGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCACTCATCTGCAGGGCACTaGCGCAGGGCTCCCCGTCCT +
Preference number: 4 (lower is better)
Translates to: RRQAAGPSPAHTRPTSDHSSAGH*RRAPRP
Trigger: AGGACGGGGAGCCCTGCGTCAGTGCCCTGCAGATGA...GTGATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCGCTGCCTGCCGTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR TCA 90 bp GCCCGTCTGATGCTGAGGAGACCCGCGAGGCCCCCTGCCAGGACATCACCTGCCTGGAGGGTCCTTGGATaGGTCGACGGCAGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: ARLMLRRPARPPARTSPAWRVLG*VDGRQR
Trigger: CCGCTGCCTGCCGTCGACTCATCCAAGGACCCTCCA...GGCAGGTGATGTCCTGGCAGGGGGCCTCGCGGGTCTCCTCAGCATCAGACGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR TCA 90 bp AGGACACAGGGTGAAGCCCCCTCGGCCACATCCGGGGCAGCCATGCCAGAGCTGCCTGGAGCAGGGGTCTaGCCCCCATGCTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: RTQGEAPSATSGAAMPELPGAGV*PPCCSR
Trigger: CCTGGAGCAGCATGGGGGTCAGACCCCTGCTCCAGG...CAGCTCTGGCATGGCTGCCCCGGATGTGGCCGAGGGGGCTTCACCCTGTGTCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR TCA 90 bp TCGGGCACTCAGTTCACCTGCCGGCAGCCGCAGGGCTCCTGGGCCCACAACTCACCTGGAGCAGGGGTCTaGCCCCCATGCTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: SGTQFTCRQPQGSWAHNSPGAGV*PPCCSR
Trigger: CCTGGAGCAGCATGGGGGTCAGACCCCTGCTCCAGG...TGAGTTGTGGGCCCAGGAGCCCTGCGGCTGCCGGCAGGTGAACTGAGTGCCCGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR TCA 90 bp GGCACGGCTCTGCCTCAAGGCCACCCCCTCCTAAGGACACAGGGTGAAGCCCCCGCCCCTGGGGGTCAGTaGGGCACGGCTCTGCCTCAA +
Preference number: 4 (lower is better)
Translates to: GTALPQGHPLLRTQGEAPAPGGQ*GTALPQ
Trigger: TTGAGGCAGAGCCGTGCCTCACTGACCCCCAGGGGC...GGGGGCTTCACCCTGTGTCCTTAGGAGGGGGTGGCCTTGAGGCAGAGCCGTGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
ENST00000551787.5
CDS-3UTR TCA 90 bp GCCCTCCTGCCATGGAGACCCACACTCCCACAAGTCTCGGACTGTGACCCCCATGGTGGGGCCTCGCGGTaGGTGCAGCCGGGGACGGGA +
Preference number: 4 (lower is better)
Translates to: ALLPWRPTLPQVSDCDPHGGASR*VQPGTG
Trigger: TCCCGTCCCCGGCTGCACTCACCGCGAGGCCCCACC...ATGGGGGTCACAGTCCGAGACTTGTGGGAGTGTGGGTCTCCATGGCAGGAGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000548421.2
CDS-3UTR GCA 90 bp AGTCGACGGCAGGCAGCGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATGCACACCTGCCTCAATaGGGTGCCGGCCGGGGTGAC +
Preference number: 4 (lower is better)
Translates to: SRRQAAGPSPAHTRPTSDAHLPQ*GAGRGD
Trigger: GTCACCCCGGCCGGCACCGCATTGAGGCAGGTGTGC...ATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCGCTGCCTGCCGTCGACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327359.7
CDS-3UTR GCA 90 bp GGACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCAGAGTCGGGGTTTTaGCAGCACCTGGCTCGCCGC +
Preference number: 4 (lower is better)
Translates to: GRGLWDRCHLSPGVSALGPESGF*QHLARR
Trigger: GCGGCGAGCCAGGTGCTGGCAAAACCCCGACTCTGG...CCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327359.7
ENST00000440513.7
CDS-3UTR GCA 90 bp GACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCCAGAGTCGGGGTTTTaGCAGCACCTGGCTCGCCGC +
Preference number: 4 (lower is better)
Translates to: DEGCGTGATCHQESRRWGPESGF*QHLARR
Trigger: GCGGCGAGCCAGGTGCTGGCAAAACCCCGACTCTGG...GCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327359.7
ENST00000440513.7
CDS-3UTR GCA 90 bp GACGGCAGGCAGCGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCACACGGCCGCGGGTCAGGTaGCTGCTCACGGCCATCTTG +
Preference number: 4 (lower is better)
Translates to: DGRQRDPALHTPGPHLITRPRVR*LLTAIL
Trigger: CAAGATGGCCGTGAGCAGGCACCTGACCCGCGGCCG...TGTGATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCGCTGCCTGCCGTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000547530.7
CDS-3UTR GCA 90 bp GCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCTGCCTGGGAGCATGTGCGGCGTaGCCTCCGTACGGCAGACCA +
Preference number: 4 (lower is better)
Translates to: AVGQVPPVTRSLGAGACLGACAA*PPYGRP
Trigger: TGGTCTGCCGTACGGAGGGCACGCCGCACATGCTCC...CAGGCAGGCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000440513.7
ENST00000547530.7
CDS-3UTR GCA 90 bp GACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCGGAGCATGTGCGGCGTaGCCTCCGTACGGCAGACCA +
Preference number: 4 (lower is better)
Translates to: DEGCGTGATCHQESRRWGGACAA*PPYGRP
Trigger: TGGTCTGCCGTACGGAGGGCACGCCGCACATGCTCC...GCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000440513.7
ENST00000547530.7
CDS-3UTR GCA 90 bp GTCGACGGCAGGCAGCGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCGGGCGCCGGCCTGTGTaGATCCAGTCCCGCTTCATC +
Preference number: 4 (lower is better)
Translates to: VDGRQRDPALHTPGPHLIGRRPV*IQSRFI
Trigger: GATGAAGCGGGACTGGATGCACACAGGCCGGCGCCC...GATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCGCTGCCTGCCGTCGAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000547530.7
CDS-3UTR GCA 90 bp GGGAGGATGAGGCCCCTGGGGGTCAGTGAGGCACGGCTCTGCCTCAAGGCCACCGGGCGCCGGCCTGTGTaGATCCAGTCCCGCTTCATC +
Preference number: 4 (lower is better)
Translates to: GRMRPLGVSEARLCLKATGRRPV*IQSRFI
Trigger: GATGAAGCGGGACTGGATGCACACAGGCCGGCGCCC...GGTGGCCTTGAGGCAGAGCCGTGCCTCACTGACCCCCAGGGGCCTCATCCTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379932.8
ENST00000379937.6
ENST00000392557.8
ENST00000547530.7
ENST00000551787.5
CDS-3UTR GCA 90 bp GACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCTGCTGCTTCCGAGCTaGCGGGGGCACCACCAAGGA +
Preference number: 4 (lower is better)
Translates to: DEGCGTGATCHQESRRWGLLLPS*RGHHQG
Trigger: TCCTTGGTGGTGCCCCCGGCAGCTCGGAAGCAGCAG...GCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp AGGCAGCGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCACACACATGCCAGGGCCGGAGGTCTaGCGCCCCACTCGGGGCTTC +
Preference number: 4 (lower is better)
Translates to: RQRDPALHTPGPHLITHMPGPEV*RPTRGF
Trigger: GAAGCCCCGAGTGGGGCGGCAGACCTCCGGCCCTGG...CATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCGCTGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp CGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCACACACATGCAGACGCCAGGGCCGGAGGTCTaGCGCCCCACTCGGGGCTTC +
Preference number: 4 (lower is better)
Translates to: RDPALHTPGPHLITHMQTPGPEV*RPTRGF
Trigger: GAAGCCCCGAGTGGGGCGGCAGACCTCCGGCCCTGG...CGTCTGCATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp GGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCTGCCCTGGCACTGGCGCTATaGTCGGGCTGTGCATCCTCC +
Preference number: 4 (lower is better)
Translates to: GLWDRCHLSPGVSALGPALALAL*SGCASS
Trigger: GGAGGATGCACAGCCCGAGCATAGCGCCAGTGCCAG...GGCAGGCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp GCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCTGCCTGGGTCAGCCCCACTTCTaGTGGCCGGCGTCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: AVGQVPPVTRSLGAGACLGQPHF*WPASSF
Trigger: GAAGGAGGACGCCGGCCAGCAGAAGTGGGGCTGACC...CAGGCAGGCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp AGGACACAGGGTGAAGCCCCCTCGGCCACATCCGGGGCAGCCATGCCAGAGCTGACCCGCGAGGCCCCCTaGCAGGACATCACCTGCCTG +
Preference number: 4 (lower is better)
Translates to: RTQGEAPSATSGAAMPELTREAP*QDITCL
Trigger: CAGGCAGGTGATGTCCTGGCAGGGGGCCTCGCGGGT...CAGCTCTGGCATGGCTGCCCCGGATGTGGCCGAGGGGGCTTCACCCTGTGTCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp GTCTGGCCTGCTGCGGGCCAAGTTGGGGCAGGACATACAGCCCATTCCATGGGGGCGCTGGGGCCTGCCTaGTGCGGTCCTGGAAGCCCG +
Preference number: 4 (lower is better)
Translates to: VWPAAGQVGAGHTAHSMGALGPA*CGPGSP
Trigger: CGGGCTTCCAGGACCGCAGCAGGCAGGCCCCAGCGC...CCCCATGGAATGGGCTGTATGTCCTGCCCCAACTTGGCCCGCAGCAGGCCAGAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp GGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCTGCCGGGCTGTGGGACAGGTaGCACCTGTCACCAGGAGTC +
Preference number: 4 (lower is better)
Translates to: GLWDRCHLSPGVSALGPAGLWDR*HLSPGV
Trigger: GACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCC...GGCAGGCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp TGGGACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGAGCGGGACCCAGCCCTaGACACACCCGGCCCACATC +
Preference number: 4 (lower is better)
Translates to: WDEGCGTGATCHQESRRWSGTQP*THPAHI
Trigger: GATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCGCT...CCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTCCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp GCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCTGCCTGGGCATGCACCAGCTGTaGGGCCCAGGCCAGGTGACA +
Preference number: 4 (lower is better)
Translates to: AVGQVPPVTRSLGAGACLGMHQL*GPGQVT
Trigger: TGTCACCTGGCCTGGGCCGCACAGCTGGTGCATGCC...CAGGCAGGCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392557.8
CDS-3UTR GCA 90 bp GGGGACGGTGCGGAGGGTGGGCTGGAGACTCCAGAGCTGGTCCTGAGTCACAGGCTCAGGAGGGGACGGTaGGGAGGGTGGGCTGGAGAC +
Preference number: 4 (lower is better)
Translates to: GDGAEGGLETPELVLSHRLRRGR*GGWAGD
Trigger: GTCTCCAGCCCACCCTCCGCACCGTCCCCTCCTGAG...CCTGTGACTCAGGACCAGCTCTGGAGTCTCCAGCCCACCCTCCGCACCGTCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp TGCTGCTCAGGAGGGGACGGTGCGGAGGGTGGGCTGGAGACTCCAGAGCTGGTCGCTGCTGGCGCCGAGTaGTGCTCAGGAGGGGACGGT +
Preference number: 4 (lower is better)
Translates to: CCSGGDGAEGGLETPELVAAGAE*CSGGDG
Trigger: ACCGTCCCCTCCTGAGCAGCACTCGGCGCCAGCAGC...GACCAGCTCTGGAGTCTCCAGCCCACCCTCCGCACCGTCCCCTCCTGAGCAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp GGGAGGATGAGGCCCCTGGGGGTCAGTGAGGCACGGCTCTGCCTCAAGGCCACCCACTCTGGCAGAGGCTaGTGGCGCCGAGTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: GRMRPLGVSEARLCLKATHSGRG*WRRVLL
Trigger: GAGCAGCACTCGGCGCCAGCAGCCTCTGCCAGAGTG...GGTGGCCTTGAGGCAGAGCCGTGCCTCACTGACCCCCAGGGGCCTCATCCTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp CTCCTAAGGACACAGGGTGAAGCCCCCTCGGCCACATCCGGGGCAGCCATGCCACTCAGCTCCCACGGCTaGGCCGGACACCTGCAGGGC +
Preference number: 4 (lower is better)
Translates to: LLRTQGEAPSATSGAAMPLSSHG*AGHLQG
Trigger: GCCCTGCAGGTGTCCGGCGCAGCCGTGGGAGCTGAG...TGGCATGGCTGCCCCGGATGTGGCCGAGGGGGCTTCACCCTGTGTCCTTAGGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp GCTCTGCCTCAAGGCCACCCCCTCCTAAGGACACAGGGTGAAGCCCCCTCGGCCGGCACTCAGTTCACCTaGCGGCAGCCGCAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: ALPQGHPLLRTQGEAPSAGTQFT*RQPQGS
Trigger: GGAGCCCTGCGGCTGCCGGCAGGTGAACTGAGTGCC...GGCCGAGGGGGCTTCACCCTGTGTCCTTAGGAGGGGGTGGCCTTGAGGCAGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp AGCCCGTCTGATGCTGAGGAGACCCGCGAGGCCCCCTGCCAGGACATCACCTGCGGCACTCAGTTCACCTaGCGGCAGCCGCAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: SPSDAEETREAPCQDITCGTQFT*RQPQGS
Trigger: GGAGCCCTGCGGCTGCCGGCAGGTGAACTGAGTGCC...GCAGGTGATGTCCTGGCAGGGGGCCTCGCGGGTCTCCTCAGCATCAGACGGGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp GGCACGGCTCTGCCTCAAGGCCACCCCCTCCTAAGGACACAGGGTGAAGCCCCCGGCACTCAGTTCACCTaGCGGCAGCCGCAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: GTALPQGHPLLRTQGEAPGTQFT*RQPQGS
Trigger: GGAGCCCTGCGGCTGCCGGCAGGTGAACTGAGTGCC...GGGGGCTTCACCCTGTGTCCTTAGGAGGGGGTGGCCTTGAGGCAGAGCCGTGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp AGGATGAGGCCCCTGGGGGTCAGTGAGGCACGGCTCTGCCTCAAGGCCACCCCCAGTGAGGCACGGCTCTaGCTCAAGGCCACCCCCTCC +
Preference number: 4 (lower is better)
Translates to: RMRPLGVSEARLCLKATPSEARL*LKATPS
Trigger: GGAGGGGGTGGCCTTGAGGCAGAGCCGTGCCTCACT...GGGGGTGGCCTTGAGGCAGAGCCGTGCCTCACTGACCCCCAGGGGCCTCATCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000379932.8
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
ENST00000551787.5
CDS-3UTR GCA 90 bp GCCAGCCTTGGAGGGTCCTTGGATGAGTCGACGGCAGGCAGCGGGACCCAGCCCAGTGAGGCACGGCTCTaGCTCAAGGCCACCCCCTCC +
Preference number: 4 (lower is better)
Translates to: ASLGGSLDESTAGSGTQPSEARL*LKATPS
Trigger: GGAGGGGGTGGCCTTGAGGCAGAGCCGTGCCTCACT...GGGCTGGGTCCCGCTGCCTGCCGTCGACTCATCCAAGGACCCTCCAAGGCTGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp TGGGACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGCCAGCTCGATGTCCGTaGCGCCGCAACCGCGGCACA +
Preference number: 4 (lower is better)
Translates to: WDEGCGTGATCHQESRRWPARCP*RRNRGT
Trigger: TGTGCCGCGGTTGCGGCGGCACGGACATCGAGCTGG...CCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTCCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379937.6
ENST00000547530.7
CDS-3UTR GCA 90 bp GACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCAGGAGCCGCCGCCGCTaGTCTCCACGAACTGCACCT +
Preference number: 4 (lower is better)
Translates to: DEGCGTGATCHQESRRWGRSRRR*SPRTAP
Trigger: AGGTGCAGTTCGTGGAGAGCAGCGGCGGCGGCTCCT...GCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379937.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GTCGACGGCAGGCAGCGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCCCTCGCCACACAAGCTaGACGCGGTGTCCTCGGTGG +
Preference number: 4 (lower is better)
Translates to: VDGRQRDPALHTPGPHLIPRHTS*TRCPRW
Trigger: CCACCGAGGACACCGCGTCCAGCTTGTGTGGCGAGG...GATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCGCTGCCTGCCGTCGAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GCCCGTCTGATGCTGAGGAGACCCGCGAGGCCCCCTGCCAGGACATCACCTGCCCCTCGCCACACAAGCTaGACGCGGTGTCCTCGGTGG +
Preference number: 4 (lower is better)
Translates to: ARLMLRRPARPPARTSPAPRHTS*TRCPRW
Trigger: CCACCGAGGACACCGCGTCCAGCTTGTGTGGCGAGG...GGCAGGTGATGTCCTGGCAGGGGGCCTCGCGGGTCTCCTCAGCATCAGACGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GGGTCAGTGAGGCACGGCTCTGCCTCAAGGCCACCCCCTCCTAAGGACACAGGGCCAGGCTGGCTGCAGTaGGGAGGGGGTCCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: GSVRHGSASRPPPPKDTGPGWLQ*GGGPAG
Trigger: CCCTGCTGGACCCCCTCCCCACTGCAGCCAGCCTGG...CCCTGTGTCCTTAGGAGGGGGTGGCCTTGAGGCAGAGCCGTGCCTCACTGACCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GCCCGTCTGATGCTGAGGAGACCCGCGAGGCCCCCTGCCAGGACATCACCTGCCCTGAGATGCCCAGGCTaGCTGCAGTGGGGAGGGGGT +
Preference number: 4 (lower is better)
Translates to: ARLMLRRPARPPARTSPALRCPG*LQWGGG
Trigger: ACCCCCTCCCCACTGCAGCCAGCCTGGGCATCTCAG...GGCAGGTGATGTCCTGGCAGGGGGCCTCGCGGGTCTCCTCAGCATCAGACGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp ACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCCTGAGATGCCCAGGCTaGCTGCAGTGGGGAGGGGGT +
Preference number: 4 (lower is better)
Translates to: TRAVGQVPPVTRSLGAGALRCPG*LQWGGG
Trigger: ACCCCCTCCCCACTGCAGCCAGCCTGGGCATCTCAG...GGCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp CTCAGGACGGGTGGGCGCCGGTCTCAGCTGTCGGGCACTCAGTTCACCTGCCGGCTGAGATGCCCAGGCTaGCTGCAGTGGGGAGGGGGT +
Preference number: 4 (lower is better)
Translates to: LRTGGRRSQLSGTQFTCRLRCPG*LQWGGG
Trigger: ACCCCCTCCCCACTGCAGCCAGCCTGGGCATCTCAG...CCGGCAGGTGAACTGAGTGCCCGACAGCTGAGACCGGCGCCCACCCGTCCTGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GCCAGCCTTGGAGGGTCCTTGGATGAGTCGACGGCAGGCAGCGGGACCCAGCCCCTGAGATGCCCAGGCTaGCTGCAGTGGGGAGGGGGT +
Preference number: 4 (lower is better)
Translates to: ASLGGSLDESTAGSGTQPLRCPG*LQWGGG
Trigger: ACCCCCTCCCCACTGCAGCCAGCCTGGGCATCTCAG...GGGCTGGGTCCCGCTGCCTGCCGTCGACTCATCCAAGGACCCTCCAAGGCTGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp ACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCCAGCCCCACTTCTGCTaGCCGGCGTCCTCCTTCGTG +
Preference number: 4 (lower is better)
Translates to: TRAVGQVPPVTRSLGAGAQPHFC*PASSFV
Trigger: CACGAAGGAGGACGCCGGCCAGCAGAAGTGGGGCTG...GGCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GGGAGGATGAGGCCCCTGGGGGTCAGTGAGGCACGGCTCTGCCTCAAGGCCACCCAGCCCCACTTCTGCTaGCCGGCGTCCTCCTTCGTG +
Preference number: 4 (lower is better)
Translates to: GRMRPLGVSEARLCLKATQPHFC*PASSFV
Trigger: CACGAAGGAGGACGCCGGCCAGCAGAAGTGGGGCTG...GGTGGCCTTGAGGCAGAGCCGTGCCTCACTGACCCCCAGGGGCCTCATCCTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp TGGGACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGTCCACCAGCACCGCCTaGGGCCTGGCAGGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: WDEGCGTGATCHQESRRWSTSTA*GLAGSA
Trigger: AGCTGAGCCTGCCAGGCCCCAGGCGGTGCTGGTGGA...CCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTCCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp TGCTGCTCAGGAGGGGACGGTGCGGAGGGTGGGCTGGAGACTCCAGAGCTGGTCTCCACCAGCACCGCCTaGGGCCTGGCAGGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: CCSGGDGAEGGLETPELVSTSTA*GLAGSA
Trigger: AGCTGAGCCTGCCAGGCCCCAGGCGGTGCTGGTGGA...GACCAGCTCTGGAGTCTCCAGCCCACCCTCCGCACCGTCCCCTCCTGAGCAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp AGCCCGTCTGATGCTGAGGAGACCCGCGAGGCCCCCTGCCAGGACATCACCTGCGCCTCCTCGTCGGCGTaGTATGACACGGGCCCGCTC +
Preference number: 4 (lower is better)
Translates to: SPSDAEETREAPCQDITCASSSA*YDTGPL
Trigger: GAGCGGGCCCGTGTCATACCACGCCGACGAGGAGGC...GCAGGTGATGTCCTGGCAGGGGGCCTCGCGGGTCTCCTCAGCATCAGACGGGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp TGGGACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGCCTCCTCGTCGGCGTaGTATGACACGGGCCCGCTC +
Preference number: 4 (lower is better)
Translates to: WDEGCGTGATCHQESRRWASSSA*YDTGPL
Trigger: GAGCGGGCCCGTGTCATACCACGCCGACGAGGAGGC...CCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTCCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCGTGCGGAGGGTGGGCTaGAGACTCCAGAGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: DEGCGTGATCHQESRRWGVRRVG*RLQSWS
Trigger: GGACCAGCTCTGGAGTCTCCAGCCCACCCTCCGCAC...GCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp ACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCTCTGGCAGAGGCTGCTaGCGCCGAGTGCTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: TRAVGQVPPVTRSLGAGASGRGC*RRVLLR
Trigger: CCTGAGCAGCACTCGGCGCCAGCAGCCTCTGCCAGA...GGCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GGGAGGATGAGGCCCCTGGGGGTCAGTGAGGCACGGCTCTGCCTCAAGGCCACCTCTGGCAGAGGCTGCTaGCGCCGAGTGCTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: GRMRPLGVSEARLCLKATSGRGC*RRVLLR
Trigger: CCTGAGCAGCACTCGGCGCCAGCAGCCTCTGCCAGA...GGTGGCCTTGAGGCAGAGCCGTGCCTCACTGACCCCCAGGGGCCTCATCCTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GTGGGCGCCGGTCTCAGCTGTCGGGCACTCAGTTCACCTGCCGGCAGCCGCAGGCAACTCAAGTGGCCCTaGAGCAGGGGTCTGACCCCC +
Preference number: 4 (lower is better)
Translates to: VGAGLSCRALSSPAGSRRQLKWP*SRGLTP
Trigger: GGGGGTCAGACCCCTGCTCCAGGGCCACTTGAGTTG...CCTGCGGCTGCCGGCAGGTGAACTGAGTGCCCGACAGCTGAGACCGGCGCCCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCTGGCAGGACCCAGGCTaGCTACTGAGCTCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: DEGCGTGATCHQESRRWGWQDPG*LLSSGR
Trigger: CCGCCCAGAGCTCAGTAGCCAGCCTGGGTCCTGCCA...GCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GCTCTGCCTCAAGGCCACCCCCTCCTAAGGACACAGGGTGAAGCCCCCTCGGCCTCCAGGGACACGAACTaGCCCACGGCCGAGGAGCCG +
Preference number: 4 (lower is better)
Translates to: ALPQGHPLLRTQGEAPSASRDTN*PTAEEP
Trigger: CGGCTCCTCGGCCGTGGGCCAGTTCGTGTCCCTGGA...GGCCGAGGGGGCTTCACCCTGTGTCCTTAGGAGGGGGTGGCCTTGAGGCAGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000379937.6
ENST00000547530.7
CDS-3UTR CCA 90 bp CGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCACACACATGCAGACGGCCCCGTCCGCCGTGTaGCTGACACGCAGCCTGCGG +
Preference number: 4 (lower is better)
Translates to: RDPALHTPGPHLITHMQTAPSAV*LTRSLR
Trigger: CCGCAGGCTGCGTGTCAGCCACACGGCGGACGGGGC...CGTCTGCATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446501.6
CDS-3UTR TCA 90 bp AGTCGACGGCAGGCAGCGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCCTGGAGCAGGTCGCTaGGGTCCAGGAGCATGTGCG +
Preference number: 4 (lower is better)
Translates to: SRRQAAGPSPAHTRPTSDPGAGR*GPGACA
Trigger: CGCACATGCTCCTGGACCTCAGCGACCTGCTCCAGG...ATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCGCTGCCTGCCGTCGACT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000547530.7
CDS-3UTR TCA 90 bp GGACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCTGGCGGTACTGGCCTaGATTGGCTCCCGTCGCTTG +
Preference number: 4 (lower is better)
Translates to: GRGLWDRCHLSPGVSALGLAVLA*IGSRRL
Trigger: CAAGCGACGGGAGCCAATTCAGGCCAGTACCGCCAG...CCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR TCA 90 bp ACTCTGGCAGAGGCTGCTGGCGCCGAGTGCTGCTCAGGAGGGGACGGTGCGGAGCTGGCGGTACTGGCCTaGATTGGCTCCCGTCGCTTG +
Preference number: 4 (lower is better)
Translates to: TLAEAAGAECCSGGDGAELAVLA*IGSRRL
Trigger: CAAGCGACGGGAGCCAATTCAGGCCAGTACCGCCAG...CTCCGCACCGTCCCCTCCTGAGCAGCACTCGGCGCCAGCAGCCTCTGCCAGAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR TCA 90 bp AGTCGACGGCAGGCAGCGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCGGCGTCCTCCTTCGTaGCAGCTTCCTGGCACTGGC +
Preference number: 4 (lower is better)
Translates to: SRRQAAGPSPAHTRPTSDRRPPS*QLPGTG
Trigger: GCCAGTGCCAGGAAGCTGTCACGAAGGAGGACGCCG...ATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCGCTGCCTGCCGTCGACT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR TCA 90 bp GACGGCAGGCAGCGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCACATCATCTGCAGGGCACTaGCGCAGGGCTCCCCGTCCT +
Preference number: 4 (lower is better)
Translates to: DGRQRDPALHTPGPHLITSSAGH*RRAPRP
Trigger: AGGACGGGGAGCCCTGCGTCAGTGCCCTGCAGATGA...TGTGATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCGCTGCCTGCCGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR TCA 90 bp GCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCTGCCTGCTCCAGAGCTGGTCCTaGGTCACAGGGCCAGCACAC +
Preference number: 4 (lower is better)
Translates to: AVGQVPPVTRSLGAGACLLQSWS*VTGPAH
Trigger: GTGTGCTGGCCCTGTGACTCAGGACCAGCTCTGGAG...CAGGCAGGCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR TCA 90 bp GGGTCAGTGAGGCACGGCTCTGCCTCAAGGCCACCCCCTCCTAAGGACACAGGGCCTGGAGCAGGGGTCTaGCCCCCATGCTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: GSVRHGSASRPPPPKDTGPGAGV*PPCCSR
Trigger: CCTGGAGCAGCATGGGGGTCAGACCCCTGCTCCAGG...CCCTGTGTCCTTAGGAGGGGGTGGCCTTGAGGCAGAGCCGTGCCTCACTGACCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR TCA 90 bp GGGTGGGGGTGTCTGCCTCGGACGAGGCAGGTATCTGGATGCAGGGCCACAGCTCCTGGAGCAGGGGTCTaGCCCCCATGCTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: GWGCLPRTRQVSGCRATAPGAGV*PPCCSR
Trigger: CCTGGAGCAGCATGGGGGTCAGACCCCTGCTCCAGG...AGCTGTGGCCCTGCATCCAGATACCTGCCTCGTCCGAGGCAGACACCCCCACCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR TCA 90 bp AGGATGAGGCCCCTGGGGGTCAGTGAGGCACGGCTCTGCCTCAAGGCCACCCCCCCTAAGGACACAGGGTaGAGCCCCCTCGGCCACATC +
Preference number: 4 (lower is better)
Translates to: RMRPLGVSEARLCLKATPPKDTG*SPLGHI
Trigger: GATGTGGCCGAGGGGGCTTCACCCTGTGTCCTTAGG...GGGGGTGGCCTTGAGGCAGAGCCGTGCCTCACTGACCCCCAGGGGCCTCATCCT
68% GC, longest homopolymer 7 nt, total homopolymer stretches 21 nt.
Matches the following 6 transcripts:
ENST00000379932.8
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
ENST00000551787.5
CDS-3UTR TCA 90 bp GGGAGGATGAGGCCCCTGGGGGTCAGTGAGGCACGGCTCTGCCTCAAGGCCACCCCTAAGGACACAGGGTaGAGCCCCCTCGGCCACATC +
Preference number: 4 (lower is better)
Translates to: GRMRPLGVSEARLCLKATPKDTG*SPLGHI
Trigger: GATGTGGCCGAGGGGGCTTCACCCTGTGTCCTTAGG...GGTGGCCTTGAGGCAGAGCCGTGCCTCACTGACCCCCAGGGGCCTCATCCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000379932.8
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
ENST00000551787.5
CDS-3UTR TCA 90 bp GGTGGGGGTGTCTGCCTCGGACGAGGCAGGTATCTGGATGCAGGGCCACAGCTGGCCCCTGGGGGTCAGTaGGGCACGGCTCTGCCTCAA +
Preference number: 4 (lower is better)
Translates to: GGGVCLGRGRYLDAGPQLAPGGQ*GTALPQ
Trigger: TTGAGGCAGAGCCGTGCCTCACTGACCCCCAGGGGC...CAGCTGTGGCCCTGCATCCAGATACCTGCCTCGTCCGAGGCAGACACCCCCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR TCA 90 bp TGCTGCTCAGGAGGGGACGGTGCGGAGGGTGGGCTGGAGACTCCAGAGCTGGTCGTTGTCCTCCAGCACTaGGCCGCAGGCGGTGCACAC +
Preference number: 4 (lower is better)
Translates to: CCSGGDGAEGGLETPELVVVLQH*AAGGAH
Trigger: GTGTGCACCGCCTGCGGCTCAGTGCTGGAGGACAAC...GACCAGCTCTGGAGTCTCCAGCCCACCCTCCGCACCGTCCCCTCCTGAGCAGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379937.6
ENST00000547530.7
CDS-3UTR GCA 90 bp ACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCTGGCGCCTCCCATTCTaGAGGGTCTGCGCTCTCGAC +
Preference number: 4 (lower is better)
Translates to: TRAVGQVPPVTRSLGAGAWRLPF*RVCALD
Trigger: GTCGAGAGCGCAGACCCTGCAGAATGGGAGGCGCCA...GGCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327359.7
ENST00000440513.7
ENST00000547530.7
CDS-3UTR GCA 90 bp CTCAGGACGGGTGGGCGCCGGTCTCAGCTGTCGGGCACTCAGTTCACCTGCCGGTGGCGCCTCCCATTCTaGAGGGTCTGCGCTCTCGAC +
Preference number: 4 (lower is better)
Translates to: LRTGGRRSQLSGTQFTCRWRLPF*RVCALD
Trigger: GTCGAGAGCGCAGACCCTGCAGAATGGGAGGCGCCA...CCGGCAGGTGAACTGAGTGCCCGACAGCTGAGACCGGCGCCCACCCGTCCTGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547530.7
CDS-3UTR GCA 90 bp GCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCTGCCTGGCGGTGTCCAGGCAGTaGTGGTTCAGCTGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: AVGQVPPVTRSLGAGACLAVSRQ*WFSCSW
Trigger: CCAGCTGCAGCTGAACCAGCACTGCCTGGACACCGC...CAGGCAGGCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000440513.7
ENST00000547530.7
CDS-3UTR GCA 90 bp TGGCGCCGAGTGCTGCTCAGGAGGGGACGGTGCGGAGGGTGGGCTGGAGACTCCATCCGCAGCTTCCTCTaGCCAGCTGTGTACGAGGGG +
Preference number: 4 (lower is better)
Translates to: WRRVLLRRGRCGGWAGDSIRSFL*PAVYEG
Trigger: CCCCTCGTACACAGCTGGGCAGAGGAAGCTGCGGAT...GGAGTCTCCAGCCCACCCTCCGCACCGTCCCCTCCTGAGCAGCACTCGGCGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp TGGGACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGCTGCTGCTTCCGAGCTaGCGGGGGCACCACCAAGGA +
Preference number: 4 (lower is better)
Translates to: WDEGCGTGATCHQESRRWLLLPS*RGHHQG
Trigger: TCCTTGGTGGTGCCCCCGGCAGCTCGGAAGCAGCAG...CCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp TCGGGCACTCAGTTCACCTGCCGGCAGCCGCAGGGCTCCTGGGCCCACAACTCACTGCTGCTTCCGAGCTaGCGGGGGCACCACCAAGGA +
Preference number: 4 (lower is better)
Translates to: SGTQFTCRQPQGSWAHNSLLLPS*RGHHQG
Trigger: TCCTTGGTGGTGCCCCCGGCAGCTCGGAAGCAGCAG...TGAGTTGTGGGCCCAGGAGCCCTGCGGCTGCCGGCAGGTGAACTGAGTGCCCGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp GTCTGGCCTGCTGCGGGCCAAGTTGGGGCAGGACATACAGCCCATTCCATGGGGTGTGCATCCTCCCTGTaGGGACTGCCCCCGCCGGCG +
Preference number: 4 (lower is better)
Translates to: VWPAAGQVGAGHTAHSMGCASSL*GLPPPA
Trigger: CGCCGGCGGGGGCAGTCCGCACAGGGAGGATGCACA...CCCCATGGAATGGGCTGTATGTCCTGCCCCAACTTGGCCCGCAGCAGGCCAGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp TGGCGCCGAGTGCTGCTCAGGAGGGGACGGTGCGGAGGGTGGGCTGGAGACTCCGCTATGCTCGGGCTGTaGATCCTCCCTGTGCGGACT +
Preference number: 4 (lower is better)
Translates to: WRRVLLRRGRCGGWAGDSAMLGL*ILPVRT
Trigger: AGTCCGCACAGGGAGGATGCACAGCCCGAGCATAGC...GGAGTCTCCAGCCCACCCTCCGCACCGTCCCCTCCTGAGCAGCACTCGGCGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp GTCGACGGCAGGCAGCGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCCTGGCACTGGCGCTATaGTCGGGCTGTGCATCCTCC +
Preference number: 4 (lower is better)
Translates to: VDGRQRDPALHTPGPHLILALAL*SGCASS
Trigger: GGAGGATGCACAGCCCGAGCATAGCGCCAGTGCCAG...GATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCGCTGCCTGCCGTCGAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp CTCAGGACGGGTGGGCGCCGGTCTCAGCTGTCGGGCACTCAGTTCACCTGCCGGCTGGCACTGGCGCTATaGTCGGGCTGTGCATCCTCC +
Preference number: 4 (lower is better)
Translates to: LRTGGRRSQLSGTQFTCRLALAL*SGCASS
Trigger: GGAGGATGCACAGCCCGAGCATAGCGCCAGTGCCAG...CCGGCAGGTGAACTGAGTGCCCGACAGCTGAGACCGGCGCCCACCCGTCCTGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp TGCTGCTCAGGAGGGGACGGTGCGGAGGGTGGGCTGGAGACTCCAGAGCTGGTCGGTCAGCCCCACTTCTaGTGGCCGGCGTCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: CCSGGDGAEGGLETPELVGQPHF*WPASSF
Trigger: GAAGGAGGACGCCGGCCAGCAGAAGTGGGGCTGACC...GACCAGCTCTGGAGTCTCCAGCCCACCCTCCGCACCGTCCCCTCCTGAGCAGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp TCGGGCACTCAGTTCACCTGCCGGCAGCCGCAGGGCTCCTGGGCCCACAACTCAGGTCAGCCCCACTTCTaGTGGCCGGCGTCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: SGTQFTCRQPQGSWAHNSGQPHF*WPASSF
Trigger: GAAGGAGGACGCCGGCCAGCAGAAGTGGGGCTGACC...TGAGTTGTGGGCCCAGGAGCCCTGCGGCTGCCGGCAGGTGAACTGAGTGCCCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp ACATGGGACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCCTGGGGCCTGCCTGCTaGGGTCCTGGAAGCCCGTCT +
Preference number: 4 (lower is better)
Translates to: TWDEGCGTGATCHQESRRLGPAC*GPGSPS
Trigger: AGACGGGCTTCCAGGACCGCAGCAGGCAGGCCCCAG...GCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTCCCATGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp ACGGCTCTGCCTCAAGGCCACCCCCTCCTAAGGACACAGGGTGAAGCCCCCTCGCTGGGGCCTGCCTGCTaGGGTCCTGGAAGCCCGTCT +
Preference number: 4 (lower is better)
Translates to: TALPQGHPLLRTQGEAPSLGPAC*GPGSPS
Trigger: AGACGGGCTTCCAGGACCGCAGCAGGCAGGCCCCAG...CGAGGGGGCTTCACCCTGTGTCCTTAGGAGGGGGTGGCCTTGAGGCAGAGCCGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp GTCGACGGCAGGCAGCGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCGGGCTGTGGGACAGGTaGCACCTGTCACCAGGAGTC +
Preference number: 4 (lower is better)
Translates to: VDGRQRDPALHTPGPHLIGLWDR*HLSPGV
Trigger: GACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCC...GATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCGCTGCCTGCCGTCGAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp AGCCCGTCTGATGCTGAGGAGACCCGCGAGGCCCCCTGCCAGGACATCACCTGCGGCGGTCCAGGAGGTTaGGTGTGTGTCCTCGGGGAG +
Preference number: 4 (lower is better)
Translates to: SPSDAEETREAPCQDITCGGPGG*VCVLGE
Trigger: CTCCCCGAGGACACACACGCAACCTCCTGGACCGCC...GCAGGTGATGTCCTGGCAGGGGGCCTCGCGGGTCTCCTCAGCATCAGACGGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392557.8
CDS-3UTR GCA 90 bp GGTGGGGGTGTCTGCCTCGGACGAGGCAGGTATCTGGATGCAGGGCCACAGCTGCTCAGGAGGGGACGGTaGGGAGGGTGGGCTGGAGAC +
Preference number: 4 (lower is better)
Translates to: GGGVCLGRGRYLDAGPQLLRRGR*GGWAGD
Trigger: GTCTCCAGCCCACCCTCCGCACCGTCCCCTCCTGAG...CAGCTGTGGCCCTGCATCCAGATACCTGCCTCGTCCGAGGCAGACACCCCCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp ACAGGGCCAGCACACTCAGCCCTCCACACACTTGGACCAGCAGTGGGGCTGCCCCTCAGGAGGGGACGGTaGGGAGGGTGGGCTGGAGAC +
Preference number: 4 (lower is better)
Translates to: TGPAHSALHTLGPAVGLPLRRGR*GGWAGD
Trigger: GTCTCCAGCCCACCCTCCGCACCGTCCCCTCCTGAG...GGGCAGCCCCACTGCTGGTCCAAGTGTGTGGAGGGCTGAGTGTGCTGGCCCTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp AGGACACAGGGTGAAGCCCCCTCGGCCACATCCGGGGCAGCCATGCCAGAGCTGAGTGAGGCACGGCTCTaGCTCAAGGCCACCCCCTCC +
Preference number: 4 (lower is better)
Translates to: RTQGEAPSATSGAAMPELSEARL*LKATPS
Trigger: GGAGGGGGTGGCCTTGAGGCAGAGCCGTGCCTCACT...CAGCTCTGGCATGGCTGCCCCGGATGTGGCCGAGGGGGCTTCACCCTGTGTCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
ENST00000551787.5
CDS-3UTR CCA 90 bp GCGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCACACACATGCAGACTGTCAGACCTCGGCCTaGGAGCGACCCCCGGCGCAC +
Preference number: 4 (lower is better)
Translates to: AGPSPAHTRPTSDHTHADCQTSA*ERPPAH
Trigger: GTGCGCCGGGGGTCGCTCCCAGGCCGAGGTCTGACA...GTCTGCATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327359.7
CDS-3UTR CCA 90 bp GGACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCCAGGTGGTGGATGTaGCGCCTCCCATTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: GRGLWDRCHLSPGVSALGPRWWM*RLPFCR
Trigger: CCTGCAGAATGGGAGGCGCCACATCCACCACCTGGG...CCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327359.7
ENST00000440513.7
ENST00000547530.7
CDS-3UTR CCA 90 bp GGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCTGCCTGGTTCCCCAGGTGGTaGATGTGGCGCCTCCCATTC +
Preference number: 4 (lower is better)
Translates to: GLWDRCHLSPGVSALGPAWFPRW*MWRLPF
Trigger: GAATGGGAGGCGCCACATCCACCACCTGGGGAACCA...GGCAGGCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327359.7
ENST00000440513.7
ENST00000547530.7
CDS-3UTR CCA 90 bp TGGCGCCGAGTGCTGCTCAGGAGGGGACGGTGCGGAGGGTGGGCTGGAGACTCCTGGTTCCCCAGGTGGTaGATGTGGCGCCTCCCATTC +
Preference number: 4 (lower is better)
Translates to: WRRVLLRRGRCGGWAGDSWFPRW*MWRLPF
Trigger: GAATGGGAGGCGCCACATCCACCACCTGGGGAACCA...GGAGTCTCCAGCCCACCCTCCGCACCGTCCCCTCCTGAGCAGCACTCGGCGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547530.7
CDS-3UTR CCA 90 bp GGACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGAGCTGGTTCCCCAGGTaGTGGATGTGGCGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: GRGLWDRCHLSPGVSALGSWFPR*WMWRLP
Trigger: TGGGAGGCGCCACATCCACCACCTGGGGAACCAGCT...CCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327359.7
ENST00000440513.7
ENST00000547530.7
CDS-3UTR CCA 90 bp GTCTGGCCTGCTGCGGGCCAAGTTGGGGCAGGACATACAGCCCATTCCATGGGGCCAGGCTGGCTGCAGTaGGGAGGGGGTCCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: VWPAAGQVGAGHTAHSMGPGWLQ*GGGPAG
Trigger: CCCTGCTGGACCCCCTCCCCACTGCAGCCAGCCTGG...CCCCATGGAATGGGCTGTATGTCCTGCCCCAACTTGGCCCGCAGCAGGCCAGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GACGGCAGGCAGCGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCACACTGAGATGCCCAGGCTaGCTGCAGTGGGGAGGGGGT +
Preference number: 4 (lower is better)
Translates to: DGRQRDPALHTPGPHLITLRCPG*LQWGGG
Trigger: ACCCCCTCCCCACTGCAGCCAGCCTGGGCATCTCAG...TGTGATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCGCTGCCTGCCGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp TGCTGCTCAGGAGGGGACGGTGCGGAGGGTGGGCTGGAGACTCCAGAGCTGGTCCTGAGATGCCCAGGCTaGCTGCAGTGGGGAGGGGGT +
Preference number: 4 (lower is better)
Translates to: CCSGGDGAEGGLETPELVLRCPG*LQWGGG
Trigger: ACCCCCTCCCCACTGCAGCCAGCCTGGGCATCTCAG...GACCAGCTCTGGAGTCTCCAGCCCACCCTCCGCACCGTCCCCTCCTGAGCAGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCTGCCTGCCTCCCTGGCGGTACTaGCCTGAATTGGCTCCCGTC +
Preference number: 4 (lower is better)
Translates to: AVGQVPPVTRSLGAGACLPPWRY*PELAPV
Trigger: GACGGGAGCCAATTCAGGCCAGTACCGCCAGGGAGG...CAGGCAGGCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp AGGATGAGGCCCCTGGGGGTCAGTGAGGCACGGCTCTGCCTCAAGGCCACCCCCCCTCCCTGGCGGTACTaGCCTGAATTGGCTCCCGTC +
Preference number: 4 (lower is better)
Translates to: RMRPLGVSEARLCLKATPPPWRY*PELAPV
Trigger: GACGGGAGCCAATTCAGGCCAGTACCGCCAGGGAGG...GGGGGTGGCCTTGAGGCAGAGCCGTGCCTCACTGACCCCCAGGGGCCTCATCCT
68% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCCTCCCTGGCGGTACTaGCCTGAATTGGCTCCCGTC +
Preference number: 4 (lower is better)
Translates to: DEGCGTGATCHQESRRWGPPWRY*PELAPV
Trigger: GACGGGAGCCAATTCAGGCCAGTACCGCCAGGGAGG...GCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCTGCCCCAGCATCTTCTCGATaGCCTCCCTGGCGGTACTGG +
Preference number: 4 (lower is better)
Translates to: GLWDRCHLSPGVSALGPAPASSR*PPWRYW
Trigger: CCAGTACCGCCAGGGAGGCCATCGAGAAGATGCTGG...GGCAGGCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GGCACGGCTCTGCCTCAAGGCCACCCCCTCCTAAGGACACAGGGTGAAGCCCCCCAGCCCCACTTCTGCTaGCCGGCGTCCTCCTTCGTG +
Preference number: 4 (lower is better)
Translates to: GTALPQGHPLLRTQGEAPQPHFC*PASSFV
Trigger: CACGAAGGAGGACGCCGGCCAGCAGAAGTGGGGCTG...GGGGGCTTCACCCTGTGTCCTTAGGAGGGGGTGGCCTTGAGGCAGAGCCGTGCC
68% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp TGGGACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGCAGCCCCACTTCTGCTaGCCGGCGTCCTCCTTCGTG +
Preference number: 4 (lower is better)
Translates to: WDEGCGTGATCHQESRRWQPHFC*PASSFV
Trigger: CACGAAGGAGGACGCCGGCCAGCAGAAGTGGGGCTG...CCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp TCGGGCACTCAGTTCACCTGCCGGCAGCCGCAGGGCTCCTGGGCCCACAACTCACAGCCCCACTTCTGCTaGCCGGCGTCCTCCTTCGTG +
Preference number: 4 (lower is better)
Translates to: SGTQFTCRQPQGSWAHNSQPHFC*PASSFV
Trigger: CACGAAGGAGGACGCCGGCCAGCAGAAGTGGGGCTG...TGAGTTGTGGGCCCAGGAGCCCTGCGGCTGCCGGCAGGTGAACTGAGTGCCCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp TGGCGCCGAGTGCTGCTCAGGAGGGGACGGTGCGGAGGGTGGGCTGGAGACTCCGCTCAGCTCCGAGGGTaGGAGAGCTTGGGAGCAAAG +
Preference number: 4 (lower is better)
Translates to: WRRVLLRRGRCGGWAGDSAQLRG*ESLGAK
Trigger: CTTTGCTCCCAAGCTCTCCCACCCTCGGAGCTGAGC...GGAGTCTCCAGCCCACCCTCCGCACCGTCCCCTCCTGAGCAGCACTCGGCGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp ACGGCTCTGCCTCAAGGCCACCCCCTCCTAAGGACACAGGGTGAAGCCCCCTCGTCCACCAGCACCGCCTaGGGCCTGGCAGGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: TALPQGHPLLRTQGEAPSSTSTA*GLAGSA
Trigger: AGCTGAGCCTGCCAGGCCCCAGGCGGTGCTGGTGGA...CGAGGGGGCTTCACCCTGTGTCCTTAGGAGGGGGTGGCCTTGAGGCAGAGCCGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GGTGGGGGTGTCTGCCTCGGACGAGGCAGGTATCTGGATGCAGGGCCACAGCTGGCCTCCTCGTCGGCGTaGTATGACACGGGCCCGCTC +
Preference number: 4 (lower is better)
Translates to: GGGVCLGRGRYLDAGPQLASSSA*YDTGPL
Trigger: GAGCGGGCCCGTGTCATACCACGCCGACGAGGAGGC...CAGCTGTGGCCCTGCATCCAGATACCTGCCTCGTCCGAGGCAGACACCCCCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp TGGGGGTGTCTGCCTCGGACGAGGCAGGTATCTGGATGCAGGGCCACAGCTGGACAGGAGTCTCGGCGCTaGGGCCTGCCTGCTGCGGTC +
Preference number: 4 (lower is better)
Translates to: WGCLPRTRQVSGCRATAGQESRR*GLPAAV
Trigger: GACCGCAGCAGGCAGGCCCCAGCGCCGAGACTCCTG...TCCAGCTGTGGCCCTGCATCCAGATACCTGCCTCGTCCGAGGCAGACACCCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCTGCCCACTTGGACCAGCAGTaGGGCTGCCCCAAGCCTGTT +
Preference number: 4 (lower is better)
Translates to: GLWDRCHLSPGVSALGPAHLDQQ*GCPKPV
Trigger: AACAGGCTTGGGGCAGCCCCACTGCTGGTCCAAGTG...GGCAGGCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCTGCCTGAGCCCTCCACACACTTaGACCAGCAGTGGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: AVGQVPPVTRSLGAGACLSPPHT*TSSGAA
Trigger: GGCAGCCCCACTGCTGGTCCAAGTGTGTGGAGGGCT...CAGGCAGGCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GGACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGAGCCCTCCACACACTTaGACCAGCAGTGGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: GRGLWDRCHLSPGVSALGSPPHT*TSSGAA
Trigger: GGCAGCCCCACTGCTGGTCCAAGTGTGTGGAGGGCT...CCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GGCACGGCTCTGCCTCAAGGCCACCCCCTCCTAAGGACACAGGGTGAAGCCCCCGTGCGGAGGGTGGGCTaGAGACTCCAGAGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: GTALPQGHPLLRTQGEAPVRRVG*RLQSWS
Trigger: GGACCAGCTCTGGAGTCTCCAGCCCACCCTCCGCAC...GGGGGCTTCACCCTGTGTCCTTAGGAGGGGGTGGCCTTGAGGCAGAGCCGTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp AGGACACAGGGTGAAGCCCCCTCGGCCACATCCGGGGCAGCCATGCCAGAGCTGGTGCGGAGGGTGGGCTaGAGACTCCAGAGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: RTQGEAPSATSGAAMPELVRRVG*RLQSWS
Trigger: GGACCAGCTCTGGAGTCTCCAGCCCACCCTCCGCAC...CAGCTCTGGCATGGCTGCCCCGGATGTGGCCGAGGGGGCTTCACCCTGTGTCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp TGCTGCTCAGGAGGGGACGGTGCGGAGGGTGGGCTGGAGACTCCAGAGCTGGTCGGACGGTGCGGAGGGTaGGCTGGAGACTCCAGAGCT +
Preference number: 4 (lower is better)
Translates to: CCSGGDGAEGGLETPELVGRCGG*AGDSRA
Trigger: AGCTCTGGAGTCTCCAGCCCACCCTCCGCACCGTCC...GACCAGCTCTGGAGTCTCCAGCCCACCCTCCGCACCGTCCCCTCCTGAGCAGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp AGTCGACGGCAGGCAGCGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATTCTGGCAGAGGCTGCTaGCGCCGAGTGCTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: SRRQAAGPSPAHTRPTSDSGRGC*RRVLLR
Trigger: CCTGAGCAGCACTCGGCGCCAGCAGCCTCTGCCAGA...ATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCGCTGCCTGCCGTCGACT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCTGCCGACGAGGCAGGTATCTaGATGCAGGGCCACAGCTGG +
Preference number: 4 (lower is better)
Translates to: GLWDRCHLSPGVSALGPADEAGI*MQGHSW
Trigger: CCAGCTGTGGCCCTGCATCCAGATACCTGCCTCGTC...GGCAGGCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp CGACGGCAGGCAGCGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCACGGCCCACAACTCAAGTaGCCCTGGAGCAGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: RRQAAGPSPAHTRPTSDHGPQLK*PWSRGL
Trigger: CAGACCCCTGCTCCAGGGCCACTTGAGTTGTGGGCC...GTGATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCGCTGCCTGCCGTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GCTCTGCCTCAAGGCCACCCCCTCCTAAGGACACAGGGTGAAGCCCCCTCGGCCTGGTTCCCCAGGTGGTaGATGTGGCGCCTCCCGTCC +
Preference number: 4 (lower is better)
Translates to: ALPQGHPLLRTQGEAPSAWFPRW*MWRLPS
Trigger: GGACGGGAGGCGCCACATCCACCACCTGGGGAACCA...GGCCGAGGGGGCTTCACCCTGTGTCCTTAGGAGGGGGTGGCCTTGAGGCAGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000379937.6
CDS-3UTR CCA 90 bp GCTCTGCCTCAAGGCCACCCCCTCCTAAGGACACAGGGTGAAGCCCCCTCGGCCAGCTGGTTCCCCAGGTaGTGGATGTGGCGCCTCCCG +
Preference number: 4 (lower is better)
Translates to: ALPQGHPLLRTQGEAPSASWFPR*WMWRLP
Trigger: CGGGAGGCGCCACATCCACCACCTGGGGAACCAGCT...GGCCGAGGGGGCTTCACCCTGTGTCCTTAGGAGGGGGTGGCCTTGAGGCAGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000379937.6
CDS-3UTR TCA 90 bp AGGATGAGGCCCCTGGGGGTCAGTGAGGCACGGCTCTGCCTCAAGGCCACCCCCTTGGGGTCGCTGCTCTaGGAGGAGATGCATTCGCGG +
Preference number: 4 (lower is better)
Translates to: RMRPLGVSEARLCLKATPLGSLL*EEMHSR
Trigger: CCGCGAATGCATCTCCTCTCAGAGCAGCGACCCCAA...GGGGGTGGCCTTGAGGCAGAGCCGTGCCTCACTGACCCCCAGGGGCCTCATCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR TCA 90 bp GTCGACGGCAGGCAGCGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCTTGGGGTCGCTGCTCTaGGAGGAGATGCATTCGCGG +
Preference number: 4 (lower is better)
Translates to: VDGRQRDPALHTPGPHLILGSLL*EEMHSR
Trigger: CCGCGAATGCATCTCCTCTCAGAGCAGCGACCCCAA...GATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCGCTGCCTGCCGTCGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR TCA 90 bp TGGCGCCGAGTGCTGCTCAGGAGGGGACGGTGCGGAGGGTGGGCTGGAGACTCCGGTCATCAATGCCACTaGGGTCCAGCTCACCGTCTC +
Preference number: 4 (lower is better)
Translates to: WRRVLLRRGRCGGWAGDSGHQCH*GPAHRL
Trigger: GAGACGGTGAGCTGGACCTCAGTGGCATTGATGACC...GGAGTCTCCAGCCCACCCTCCGCACCGTCCCCTCCTGAGCAGCACTCGGCGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR TCA 90 bp TGGGACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGCTGGCGGTACTGGCCTaGATTGGCTCCCGTCGCTTG +
Preference number: 4 (lower is better)
Translates to: WDEGCGTGATCHQESRRWLAVLA*IGSRRL
Trigger: CAAGCGACGGGAGCCAATTCAGGCCAGTACCGCCAG...CCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTCCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR TCA 90 bp ACATGGGACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCCGGCGTCCTCCTTCGTaGCAGCTTCCTGGCACTGGC +
Preference number: 4 (lower is better)
Translates to: TWDEGCGTGATCHQESRRRRPPS*QLPGTG
Trigger: GCCAGTGCCAGGAAGCTGTCACGAAGGAGGACGCCG...GCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTCCCATGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR TCA 90 bp ATGGGACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGTCATCTGCAGGGCACTaGCGCAGGGCTCCCCGTCCT +
Preference number: 4 (lower is better)
Translates to: MGRGLWDRCHLSPGVSALSSAGH*RRAPRP
Trigger: AGGACGGGGAGCCCTGCGTCAGTGCCCTGCAGATGA...CAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTCCCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR TCA 90 bp TCAGGAGGGGACGGTGCGGAGGGTGGGCTGGAGACTCCAGAGCTGGTCCTGAGTTGGAGGGTCCTTGGATaGGTCGACGGCAGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: SGGDGAEGGLETPELVLSWRVLG*VDGRQR
Trigger: CCGCTGCCTGCCGTCGACTCATCCAAGGACCCTCCA...ACTCAGGACCAGCTCTGGAGTCTCCAGCCCACCCTCCGCACCGTCCCCTCCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR TCA 90 bp GGGTCAGTGAGGCACGGCTCTGCCTCAAGGCCACCCCCTCCTAAGGACACAGGGTGGAGGGTCCTTGGATaGGTCGACGGCAGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: GSVRHGSASRPPPPKDTGWRVLG*VDGRQR
Trigger: CCGCTGCCTGCCGTCGACTCATCCAAGGACCCTCCA...CCCTGTGTCCTTAGGAGGGGGTGGCCTTGAGGCAGAGCCGTGCCTCACTGACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR TCA 90 bp AGTCGACGGCAGGCAGCGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCTCCAGAGCTGGTCCTaGGTCACAGGGCCAGCACAC +
Preference number: 4 (lower is better)
Translates to: SRRQAAGPSPAHTRPTSDLQSWS*VTGPAH
Trigger: GTGTGCTGGCCCTGTGACTCAGGACCAGCTCTGGAG...ATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCGCTGCCTGCCGTCGACT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR TCA 90 bp GACGGCAGGCAGCGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCACACCTAAGGACACAGGGTaGAGCCCCCTCGGCCACATC +
Preference number: 4 (lower is better)
Translates to: DGRQRDPALHTPGPHLITPKDTG*SPLGHI
Trigger: GATGTGGCCGAGGGGGCTTCACCCTGTGTCCTTAGG...TGTGATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCGCTGCCTGCCGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR TCA 90 bp TGGGGGTGTCTGCCTCGGACGAGGCAGGTATCTGGATGCAGGGCCACAGCTGGAACCCAGGCTGGCTACTaGGCTCTGGGCGGGGGTAGG +
Preference number: 4 (lower is better)
Translates to: WGCLPRTRQVSGCRATAGTQAGY*ALGGGR
Trigger: CCTACCCCCGCCCAGAGCTCAGTAGCCAGCCTGGGT...TCCAGCTGTGGCCCTGCATCCAGATACCTGCCTCGTCCGAGGCAGACACCCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR TCA 90 bp AGGCAGCGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCACACACATGACCCAGGCTGGCTACTaGGCTCTGGGCGGGGGTAGG +
Preference number: 4 (lower is better)
Translates to: RQRDPALHTPGPHLITHMTQAGY*ALGGGR
Trigger: CCTACCCCCGCCCAGAGCTCAGTAGCCAGCCTGGGT...CATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCGCTGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR TCA 90 bp ACATGGGACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCGTTGTCCTCCAGCACTaGGCCGCAGGCGGTGCACAC +
Preference number: 4 (lower is better)
Translates to: TWDEGCGTGATCHQESRRVVLQH*AAGGAH
Trigger: GTGTGCACCGCCTGCGGCTCAGTGCTGGAGGACAAC...GCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTCCCATGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379937.6
ENST00000547530.7
CDS-3UTR GCA 90 bp GCCCGTCTGATGCTGAGGAGACCCGCGAGGCCCCCTGCCAGGACATCACCTGCCCCATTCTGCAGGGTCTaGGCTCTCGACTCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: ARLMLRRPARPPARTSPAPFCRV*ALDSFP
Trigger: GGGGAAGGAGTCGAGAGCGCAGACCCTGCAGAATGG...GGCAGGTGATGTCCTGGCAGGGGGCCTCGCGGGTCTCCTCAGCATCAGACGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327359.7
ENST00000440513.7
ENST00000547530.7
CDS-3UTR GCA 90 bp AGCCCGTCTGATGCTGAGGAGACCCGCGAGGCCCCCTGCCAGGACATCACCTGCTGGCGCCTCCCATTCTaGAGGGTCTGCGCTCTCGAC +
Preference number: 4 (lower is better)
Translates to: SPSDAEETREAPCQDITCWRLPF*RVCALD
Trigger: GTCGAGAGCGCAGACCCTGCAGAATGGGAGGCGCCA...GCAGGTGATGTCCTGGCAGGGGGCCTCGCGGGTCTCCTCAGCATCAGACGGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327359.7
ENST00000440513.7
ENST00000547530.7
CDS-3UTR GCA 90 bp TGGGACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGCGGTGTCCAGGCAGTaGTGGTTCAGCTGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: WDEGCGTGATCHQESRRWAVSRQ*WFSCSW
Trigger: CCAGCTGCAGCTGAACCAGCACTGCCTGGACACCGC...CCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTCCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000440513.7
ENST00000547530.7
CDS-3UTR GCA 90 bp TGCTGCTCAGGAGGGGACGGTGCGGAGGGTGGGCTGGAGACTCCAGAGCTGGTCGCGGTGTCCAGGCAGTaGTGGTTCAGCTGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: CCSGGDGAEGGLETPELVAVSRQ*WFSCSW
Trigger: CCAGCTGCAGCTGAACCAGCACTGCCTGGACACCGC...GACCAGCTCTGGAGTCTCCAGCCCACCCTCCGCACCGTCCCCTCCTGAGCAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379937.6
ENST00000547530.7
CDS-3UTR GCA 90 bp ACAGGGCCAGCACACTCAGCCCTCCACACACTTGGACCAGCAGTGGGGCTGCCCGGAGCATGTGCGGCGTaGCCTCCGTACGGCAGACCA +
Preference number: 4 (lower is better)
Translates to: TGPAHSALHTLGPAVGLPGACAA*PPYGRP
Trigger: TGGTCTGCCGTACGGAGGGCACGCCGCACATGCTCC...GGGCAGCCCCACTGCTGGTCCAAGTGTGTGGAGGGCTGAGTGTGCTGGCCCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379937.6
ENST00000547530.7
CDS-3UTR GCA 90 bp CTCCTAAGGACACAGGGTGAAGCCCCCTCGGCCACATCCGGGGCAGCCATGCCAGGGCGCCGGCCTGTGTaGATCCAGTCCCGCTTCATC +
Preference number: 4 (lower is better)
Translates to: LLRTQGEAPSATSGAAMPGRRPV*IQSRFI
Trigger: GATGAAGCGGGACTGGATGCACACAGGCCGGCGCCC...TGGCATGGCTGCCCCGGATGTGGCCGAGGGGGCTTCACCCTGTGTCCTTAGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000547530.7
ENST00000551787.5
CDS-3UTR GCA 90 bp GGTGGGGGTGTCTGCCTCGGACGAGGCAGGTATCTGGATGCAGGGCCACAGCTGGGGCGCCGGCCTGTGTaGATCCAGTCCCGCTTCATC +
Preference number: 4 (lower is better)
Translates to: GGGVCLGRGRYLDAGPQLGRRPV*IQSRFI
Trigger: GATGAAGCGGGACTGGATGCACACAGGCCGGCGCCC...CAGCTGTGGCCCTGCATCCAGATACCTGCCTCGTCCGAGGCAGACACCCCCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000547530.7
CDS-3UTR GCA 90 bp GGGTCAGTGAGGCACGGCTCTGCCTCAAGGCCACCCCCTCCTAAGGACACAGGGGGGCGCCGGCCTGTGTaGATCCAGTCCCGCTTCATC +
Preference number: 4 (lower is better)
Translates to: GSVRHGSASRPPPPKDTGGRRPV*IQSRFI
Trigger: GATGAAGCGGGACTGGATGCACACAGGCCGGCGCCC...CCCTGTGTCCTTAGGAGGGGGTGGCCTTGAGGCAGAGCCGTGCCTCACTGACCC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000547530.7
ENST00000551787.5
CDS-3UTR GCA 90 bp ACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCATCCGCAGCTTCCTCTaGCCAGCTGTGTACGAGGGG +
Preference number: 4 (lower is better)
Translates to: TRAVGQVPPVTRSLGAGAIRSFL*PAVYEG
Trigger: CCCCTCGTACACAGCTGGGCAGAGGAAGCTGCGGAT...GGCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp ACATGGGACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCCTGCTGCTTCCGAGCTaGCGGGGGCACCACCAAGGA +
Preference number: 4 (lower is better)
Translates to: TWDEGCGTGATCHQESRRLLLPS*RGHHQG
Trigger: TCCTTGGTGGTGCCCCCGGCAGCTCGGAAGCAGCAG...GCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTCCCATGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp GCCCTGCACACACCCGGCCCACATCTGATCACACACATGCAGACGCTTGGTCCGTGTGCATCCTCCCTGTaGGGACTGCCCCCGCCGGCG +
Preference number: 4 (lower is better)
Translates to: ALHTPGPHLITHMQTLGPCASSL*GLPPPA
Trigger: CGCCGGCGGGGGCAGTCCGCACAGGGAGGATGCACA...CGGACCAAGCGTCTGCATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp AACACCACACTGCCAGCCTTGGAGGGTCCTTGGATGAGTCGACGGCAGGCAGCGTGTGCATCCTCCCTGTaGGGACTGCCCCCGCCGGCG +
Preference number: 4 (lower is better)
Translates to: NTTLPALEGPWMSRRQAACASSL*GLPPPA
Trigger: CGCCGGCGGGGGCAGTCCGCACAGGGAGGATGCACA...CGCTGCCTGCCGTCGACTCATCCAAGGACCCTCCAAGGCTGGCAGTGTGGTGTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp GGCACGGCTCTGCCTCAAGGCCACCCCCTCCTAAGGACACAGGGTGAAGCCCCCCTGGCACTGGCGCTATaGTCGGGCTGTGCATCCTCC +
Preference number: 4 (lower is better)
Translates to: GTALPQGHPLLRTQGEAPLALAL*SGCASS
Trigger: GGAGGATGCACAGCCCGAGCATAGCGCCAGTGCCAG...GGGGGCTTCACCCTGTGTCCTTAGGAGGGGGTGGCCTTGAGGCAGAGCCGTGCC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp CGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCACACACATGCAGACGACCCGCGAGGCCCCCTaGCAGGACATCACCTGCCTG +
Preference number: 4 (lower is better)
Translates to: RDPALHTPGPHLITHMQTTREAP*QDITCL
Trigger: CAGGCAGGTGATGTCCTGGCAGGGGGCCTCGCGGGT...CGTCTGCATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp TGGGGGTGTCTGCCTCGGACGAGGCAGGTATCTGGATGCAGGGCCACAGCTGGAACCCGCGAGGCCCCCTaGCAGGACATCACCTGCCTG +
Preference number: 4 (lower is better)
Translates to: WGCLPRTRQVSGCRATAGTREAP*QDITCL
Trigger: CAGGCAGGTGATGTCCTGGCAGGGGGCCTCGCGGGT...TCCAGCTGTGGCCCTGCATCCAGATACCTGCCTCGTCCGAGGCAGACACCCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp GTCTGGCCTGCTGCGGGCCAAGTTGGGGCAGGACATACAGCCCATTCCATGGGGCTGGGGCCTGCCTGCTaGGGTCCTGGAAGCCCGTCT +
Preference number: 4 (lower is better)
Translates to: VWPAAGQVGAGHTAHSMGLGPAC*GPGSPS
Trigger: AGACGGGCTTCCAGGACCGCAGCAGGCAGGCCCCAG...CCCCATGGAATGGGCTGTATGTCCTGCCCCAACTTGGCCCGCAGCAGGCCAGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp CCTGCACACACCCGGCCCACATCTGATCACACACATGCAGACGCTTGGTCCGGTGCGCTGGGGCCTGCCTaGTGCGGTCCTGGAAGCCCG +
Preference number: 4 (lower is better)
Translates to: PAHTRPTSDHTHADAWSGALGPA*CGPGSP
Trigger: CGGGCTTCCAGGACCGCAGCAGGCAGGCCCCAGCGC...ACCGGACCAAGCGTCTGCATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp GACGGCAGGCAGCGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCACAGGGCTGTGGGACAGGTaGCACCTGTCACCAGGAGTC +
Preference number: 4 (lower is better)
Translates to: DGRQRDPALHTPGPHLITGLWDR*HLSPGV
Trigger: GACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCC...TGTGATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCGCTGCCTGCCGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp TGCTGCTCAGGAGGGGACGGTGCGGAGGGTGGGCTGGAGACTCCAGAGCTGGTCACCCATGACCCGAGATaGTGGCTGCGTCCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: CCSGGDGAEGGLETPELVTHDPR*WLRPVG
Trigger: CCCCACAGGACGCAGCCAGCATCTCGGGTCATGGGT...GACCAGCTCTGGAGTCTCCAGCCCACCCTCCGCACCGTCCCCTCCTGAGCAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392557.8
CDS-3UTR GCA 90 bp GCCCTGCACACACCCGGCCCACATCTGATCACACACATGCAGACGCTTGGTCCGGCTGGCGCCGAGTGCTaGTCAGGAGGGGACGGTGCG +
Preference number: 4 (lower is better)
Translates to: ALHTPGPHLITHMQTLGPAGAEC*SGGDGA
Trigger: CGCACCGTCCCCTCCTGAGCAGCACTCGGCGCCAGC...CGGACCAAGCGTCTGCATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp CGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCACACACATGCAGACGGCTGCTGGCGCCGAGTaGTGCTCAGGAGGGGACGGT +
Preference number: 4 (lower is better)
Translates to: RDPALHTPGPHLITHMQTAAGAE*CSGGDG
Trigger: ACCGTCCCCTCCTGAGCAGCACTCGGCGCCAGCAGC...CGTCTGCATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp GCTGCGGGCCAAGTTGGGGCAGGACATACAGCCCATTCCATGGGGAGGATGAGGCTCAGCTCCCACGGCTaGGCCGGACACCTGCAGGGC +
Preference number: 4 (lower is better)
Translates to: AAGQVGAGHTAHSMGRMRLSSHG*AGHLQG
Trigger: GCCCTGCAGGTGTCCGGCGCAGCCGTGGGAGCTGAG...CCTCATCCTCCCCATGGAATGGGCTGTATGTCCTGCCCCAACTTGGCCCGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp GCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCTGCCTGAGGCAGGTATCTGGATaGAGGGCCACAGCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: AVGQVPPVTRSLGAGACLRQVSG*RATAGG
Trigger: GCCTCCAGCTGTGGCCCTGCATCCAGATACCTGCCT...CAGGCAGGCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp AGGATGAGGCCCCTGGGGGTCAGTGAGGCACGGCTCTGCCTCAAGGCCACCCCCAGCGCCAGGACACTATaGAGGCTATGCCCGCACTGC +
Preference number: 4 (lower is better)
Translates to: RMRPLGVSEARLCLKATPSARTL*RLCPHC
Trigger: GCAGTGCGGGCATAGCCTGCATAGTGTCCTGGCGCT...GGGGGTGGCCTTGAGGCAGAGCCGTGCCTCACTGACCCCCAGGGGCCTCATCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp GGGAGGATGAGGCCCCTGGGGGTCAGTGAGGCACGGCTCTGCCTCAAGGCCACCAGCGCCAGGACACTATaGAGGCTATGCCCGCACTGC +
Preference number: 4 (lower is better)
Translates to: GRMRPLGVSEARLCLKATSARTL*RLCPHC
Trigger: GCAGTGCGGGCATAGCCTGCATAGTGTCCTGGCGCT...GGTGGCCTTGAGGCAGAGCCGTGCCTCACTGACCCCCAGGGGCCTCATCCTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp GGTGGGGGTGTCTGCCTCGGACGAGGCAGGTATCTGGATGCAGGGCCACAGCTGGACAGGGAGCGCCACTaGCCTCTGGCTCTGTCCACG +
Preference number: 4 (lower is better)
Translates to: GGGVCLGRGRYLDAGPQLDRERH*PLALST
Trigger: CGTGGACAGAGCCAGAGGGCAGTGGCGCTCCCTGTC...CAGCTGTGGCCCTGCATCCAGATACCTGCCTCGTCCGAGGCAGACACCCCCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp ACATGGGACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCAGTGAGGCACGGCTCTaGCTCAAGGCCACCCCCTCC +
Preference number: 4 (lower is better)
Translates to: TWDEGCGTGATCHQESRRSEARL*LKATPS
Trigger: GGAGGGGGTGGCCTTGAGGCAGAGCCGTGCCTCACT...GCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTCCCATGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp GCCCTCCTGCCATGGAGACCCACACTCCCACAAGTCTCGGACTGTGACCCCCATCCGCGACCTCCCCACTaGGAGCGAGCTGGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: ALLPWRPTLPQVSDCDPHPRPPH*ERAGLP
Trigger: AGGGAGGCCAGCTCGCTCGCAGTGGGGAGGTCGCGG...ATGGGGGTCACAGTCCGAGACTTGTGGGAGTGTGGGTCTCCATGGCAGGAGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548421.2
CDS-3UTR GCA 90 bp ACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCCCAGAGTCGGGGTTTTaGCAGCACCGTCCAGGGACA +
Preference number: 4 (lower is better)
Translates to: TRAVGQVPPVTRSLGAGAPESGF*QHRPGT
Trigger: TGTCCCTGGACGGTGCTGGCAAAACCCCGACTCTGG...GGCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000547530.7
CDS-3UTR CCA 90 bp TGGGACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGTTTTGCCAGCACCTaGCTCGCCGCAACCGCACCT +
Preference number: 4 (lower is better)
Translates to: WDEGCGTGATCHQESRRWGFAST*LAATAP
Trigger: AGGTGCGGTTGCGGCGAGCCAGGTGCTGGCAAAACC...CCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327359.7
ENST00000440513.7
CDS-3UTR CCA 90 bp TGGGACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGAGCTGGTTCCCCAGGTaGTGGATGTGGCGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: WDEGCGTGATCHQESRRWSWFPR*WMWRLP
Trigger: TGGGAGGCGCCACATCCACCACCTGGGGAACCAGCT...CCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327359.7
ENST00000440513.7
ENST00000547530.7
CDS-3UTR CCA 90 bp AGGACACAGGGTGAAGCCCCCTCGGCCACATCCGGGGCAGCCATGCCAGAGCTGAGCTGGTTCCCCAGGTaGTGGATGTGGCGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: RTQGEAPSATSGAAMPELSWFPR*WMWRLP
Trigger: TGGGAGGCGCCACATCCACCACCTGGGGAACCAGCT...CAGCTCTGGCATGGCTGCCCCGGATGTGGCCGAGGGGGCTTCACCCTGTGTCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000547530.7
CDS-3UTR CCA 90 bp GACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCACGCGGTGTCCTCGGTaGAGCCATCTTTTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: DEGCGTGATCHQESRRWGTRCPR*SHLLPG
Trigger: GCCTGGCAAAAGATGGCTCCACCGAGGACACCGCGT...GCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCTGCCAAGTCTTTGTTCAGGTaGCTGGCCGCGGCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: GLWDRCHLSPGVSALGPAKSLFR*LAAASS
Trigger: GCTGGAAGCCGCGGCCAGCCACCTGAACAAAGACTT...GGCAGGCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GGCACGGCTCTGCCTCAAGGCCACCCCCTCCTAAGGACACAGGGTGAAGCCCCCCCTCCCTGGCGGTACTaGCCTGAATTGGCTCCCGTC +
Preference number: 4 (lower is better)
Translates to: GTALPQGHPLLRTQGEAPPPWRY*PELAPV
Trigger: GACGGGAGCCAATTCAGGCCAGTACCGCCAGGGAGG...GGGGGCTTCACCCTGTGTCCTTAGGAGGGGGTGGCCTTGAGGCAGAGCCGTGCC
67% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp TGGCGCCGAGTGCTGCTCAGGAGGGGACGGTGCGGAGGGTGGGCTGGAGACTCCTCTCGATGGCCTCCCTaGCGGTACTGGCCTGAATTG +
Preference number: 4 (lower is better)
Translates to: WRRVLLRRGRCGGWAGDSSRWPP*RYWPEL
Trigger: CAATTCAGGCCAGTACCGCCAGGGAGGCCATCGAGA...GGAGTCTCCAGCCCACCCTCCGCACCGTCCCCTCCTGAGCAGCACTCGGCGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCTGCCTGCCAGCATCTTCTCGATaGCCTCCCTGGCGGTACTGG +
Preference number: 4 (lower is better)
Translates to: AVGQVPPVTRSLGAGACLPASSR*PPWRYW
Trigger: CCAGTACCGCCAGGGAGGCCATCGAGAAGATGCTGG...CAGGCAGGCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GCCAGCCTTGGAGGGTCCTTGGATGAGTCGACGGCAGGCAGCGGGACCCAGCCCCCAGCATCTTCTCGATaGCCTCCCTGGCGGTACTGG +
Preference number: 4 (lower is better)
Translates to: ASLGGSLDESTAGSGTQPPASSR*PPWRYW
Trigger: CCAGTACCGCCAGGGAGGCCATCGAGAAGATGCTGG...GGGCTGGGTCCCGCTGCCTGCCGTCGACTCATCCAAGGACCCTCCAAGGCTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GGACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCAGCATCTTCTCGATaGCCTCCCTGGCGGTACTGG +
Preference number: 4 (lower is better)
Translates to: GRGLWDRCHLSPGVSALGPASSR*PPWRYW
Trigger: CCAGTACCGCCAGGGAGGCCATCGAGAAGATGCTGG...CCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCACAGCTTCCTGGCACTaGCGCTATGCTCGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: DEGCGTGATCHQESRRWGTASWH*RYARAV
Trigger: CACAGCCCGAGCATAGCGCCAGTGCCAGGAAGCTGT...GCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCTGCCTTCGTGACAGCTTCCTaGCACTGGCGCTATGCTCGG +
Preference number: 4 (lower is better)
Translates to: GLWDRCHLSPGVSALGPAFVTAS*HWRYAR
Trigger: CCGAGCATAGCGCCAGTGCCAGGAAGCTGTCACGAA...GGCAGGCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCTGCCTGGCTCAGCTCCGAGGGTaGGAGAGCTTGGGAGCAAAG +
Preference number: 4 (lower is better)
Translates to: AVGQVPPVTRSLGAGACLAQLRG*ESLGAK
Trigger: CTTTGCTCCCAAGCTCTCCCACCCTCGGAGCTGAGC...CAGGCAGGCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp CTGTCGGGCACTCAGTTCACCTGCCGGCAGCCGCAGGGCTCCTGGGCCCACAACGCTCAGCTCCGAGGGTaGGAGAGCTTGGGAGCAAAG +
Preference number: 4 (lower is better)
Translates to: LSGTQFTCRQPQGSWAHNAQLRG*ESLGAK
Trigger: CTTTGCTCCCAAGCTCTCCCACCCTCGGAGCTGAGC...GTTGTGGGCCCAGGAGCCCTGCGGCTGCCGGCAGGTGAACTGAGTGCCCGACAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCGCTCAGCTCCGAGGGTaGGAGAGCTTGGGAGCAAAG +
Preference number: 4 (lower is better)
Translates to: DEGCGTGATCHQESRRWGAQLRG*ESLGAK
Trigger: CTTTGCTCCCAAGCTCTCCCACCCTCGGAGCTGAGC...GCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GCGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCACACACATGCAGACTCCACCAGCACCGCCTaGGGCCTGGCAGGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: AGPSPAHTRPTSDHTHADSTSTA*GLAGSA
Trigger: AGCTGAGCCTGCCAGGCCCCAGGCGGTGCTGGTGGA...GTCTGCATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp CGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCACACACATGCAGACGTCCACCAGCACCGCCTaGGGCCTGGCAGGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: RDPALHTPGPHLITHMQTSTSTA*GLAGSA
Trigger: AGCTGAGCCTGCCAGGCCCCAGGCGGTGCTGGTGGA...CGTCTGCATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GCCAGCCTTGGAGGGTCCTTGGATGAGTCGACGGCAGGCAGCGGGACCCAGCCCATGGGACGAGGGCTGTaGGACAGGTGCCACCTGTCA +
Preference number: 4 (lower is better)
Translates to: ASLGGSLDESTAGSGTQPMGRGL*DRCHLS
Trigger: TGACAGGTGGCACCTGTCCCACAGCCCTCGTCCCAT...GGGCTGGGTCCCGCTGCCTGCCGTCGACTCATCCAAGGACCCTCCAAGGCTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GGTGGGGGTGTCTGCCTCGGACGAGGCAGGTATCTGGATGCAGGGCCACAGCTGGTGCGGAGGGTGGGCTaGAGACTCCAGAGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: GGGVCLGRGRYLDAGPQLVRRVG*RLQSWS
Trigger: GGACCAGCTCTGGAGTCTCCAGCCCACCCTCCGCAC...CAGCTGTGGCCCTGCATCCAGATACCTGCCTCGTCCGAGGCAGACACCCCCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp ACGGCTCTGCCTCAAGGCCACCCCCTCCTAAGGACACAGGGTGAAGCCCCCTCGGGACGGTGCGGAGGGTaGGCTGGAGACTCCAGAGCT +
Preference number: 4 (lower is better)
Translates to: TALPQGHPLLRTQGEAPSGRCGG*AGDSRA
Trigger: AGCTCTGGAGTCTCCAGCCCACCCTCCGCACCGTCC...CGAGGGGGCTTCACCCTGTGTCCTTAGGAGGGGGTGGCCTTGAGGCAGAGCCGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCTGCCATGCAGGGCCACAGCTaGAGGCAGAGGACCTTCAAG +
Preference number: 4 (lower is better)
Translates to: GLWDRCHLSPGVSALGPAMQGHS*RQRTFK
Trigger: CTTGAAGGTCCTCTGCCTCCAGCTGTGGCCCTGCAT...GGCAGGCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GACGGCAGGCAGCGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCACAGGCCCACAACTCAAGTaGCCCTGGAGCAGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: DGRQRDPALHTPGPHLITGPQLK*PWSRGL
Trigger: CAGACCCCTGCTCCAGGGCCACTTGAGTTGTGGGCC...TGTGATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCGCTGCCTGCCGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GCTCTGCCTCAAGGCCACCCCCTCCTAAGGACACAGGGTGAAGCCCCCTCGGCCGGCCCACAACTCAAGTaGCCCTGGAGCAGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: ALPQGHPLLRTQGEAPSAGPQLK*PWSRGL
Trigger: CAGACCCCTGCTCCAGGGCCACTTGAGTTGTGGGCC...GGCCGAGGGGGCTTCACCCTGTGTCCTTAGGAGGGGGTGGCCTTGAGGCAGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GCTCTGCCTCAAGGCCACCCCCTCCTAAGGACACAGGGTGAAGCCCCCTCGGCCTATGCTCAGGACGGGTaGGCGCCGGTCTCAGCTGTC +
Preference number: 4 (lower is better)
Translates to: ALPQGHPLLRTQGEAPSAYAQDG*APVSAV
Trigger: GACAGCTGAGACCGGCGCCCACCCGTCCTGAGCATA...GGCCGAGGGGGCTTCACCCTGTGTCCTTAGGAGGGGGTGGCCTTGAGGCAGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp AGCCCGTCTGATGCTGAGGAGACCCGCGAGGCCCCCTGCCAGGACATCACCTGCTATGCTCAGGACGGGTaGGCGCCGGTCTCAGCTGTC +
Preference number: 4 (lower is better)
Translates to: SPSDAEETREAPCQDITCYAQDG*APVSAV
Trigger: GACAGCTGAGACCGGCGCCCACCCGTCCTGAGCATA...GCAGGTGATGTCCTGGCAGGGGGCCTCGCGGGTCTCCTCAGCATCAGACGGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp TGGGGGTGTCTGCCTCGGACGAGGCAGGTATCTGGATGCAGGGCCACAGCTGGATCCCACGAAGAGGCCTaGGGAGGCTCTCGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: WGCLPRTRQVSGCRATAGSHEEA*GGSRAS
Trigger: GGAGGCCCGAGAGCCTCCCCAGGCCTCTTCGTGGGA...TCCAGCTGTGGCCCTGCATCCAGATACCTGCCTCGTCCGAGGCAGACACCCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp TGGGGGTCAGTGAGGCACGGCTCTGCCTCAAGGCCACCCCCTCCTAAGGACACATCCCACGAAGAGGCCTaGGGAGGCTCTCGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: WGSVRHGSASRPPPPKDTSHEEA*GGSRAS
Trigger: GGAGGCCCGAGAGCCTCCCCAGGCCTCTTCGTGGGA...TGTGTCCTTAGGAGGGGGTGGCCTTGAGGCAGAGCCGTGCCTCACTGACCCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
ENST00000551787.5
CDS-3UTR CCA 90 bp TGGCGCCGAGTGCTGCTCAGGAGGGGACGGTGCGGAGGGTGGGCTGGAGACTCCTCCTACGAGTGGTACTaGGGCCTTCCCACGAAGAGG +
Preference number: 4 (lower is better)
Translates to: WRRVLLRRGRCGGWAGDSSYEWY*GLPTKR
Trigger: CCTCTTCGTGGGAAGGCCCCAGTACCACTCGTAGGA...GGAGTCTCCAGCCCACCCTCCGCACCGTCCCCTCCTGAGCAGCACTCGGCGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GGGAGGATGAGGCCCCTGGGGGTCAGTGAGGCACGGCTCTGCCTCAAGGCCACCGAGACCTCCTACGAGTaGTACTGGGGCCTTCCCACG +
Preference number: 4 (lower is better)
Translates to: GRMRPLGVSEARLCLKATETSYE*YWGLPT
Trigger: CGTGGGAAGGCCCCAGTACCACTCGTAGGAGGTCTC...GGTGGCCTTGAGGCAGAGCCGTGCCTCACTGACCCCCAGGGGCCTCATCCTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000379932.8
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
ENST00000551787.5
CDS-3UTR CCA 90 bp ACTCTGGCAGAGGCTGCTGGCGCCGAGTGCTGCTCAGGAGGGGACGGTGCGGAGTGCTGCGGGCCAAGTTaGGGCAGGACATACAGCCCA +
Preference number: 4 (lower is better)
Translates to: TLAEAAGAECCSGGDGAECCGPS*GRTYSP
Trigger: TGGGCTGTATGTCCTGCCCCAACTTGGCCCGCAGCA...CTCCGCACCGTCCCCTCCTGAGCAGCACTCGGCGCCAGCAGCCTCTGCCAGAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp ACATGGGACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGCAGGACCCAGGCTaGCTACTGAGCTCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: TWDEGCGTGATCHQESRRWQDPG*LLSSGR
Trigger: CCGCCCAGAGCTCAGTAGCCAGCCTGGGTCCTGCCA...GCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTCCCATGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GGTGCCCTCCTGCCATGGAGACCCACACTCCCACAAGTCTCGGACTGTGACCCCTCCAGGGACACGAACTaGCCCACGGCCGAGGAGCCG +
Preference number: 4 (lower is better)
Translates to: GALLPWRPTLPQVSDCDPSRDTN*PTAEEP
Trigger: CGGCTCCTCGGCCGTGGGCCAGTTCGTGTCCCTGGA...GGGGTCACAGTCCGAGACTTGTGGGAGTGTGGGTCTCCATGGCAGGAGGGCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548421.2
CDS-3UTR CCA 90 bp ACGGGGAACTCCCAGCGCCAGGACACTATGCAGGCTATGCCCGCACTGCCTACACGGGGACGCGAGGACTaGAGCCGCGACCTCCCCACT +
Preference number: 4 (lower is better)
Translates to: TGNSQRQDTMQAMPALPTRGRED*SRDLPT
Trigger: AGTGGGGAGGTCGCGGCTCCAGTCCTCGCGTCCCCG...TGTAGGCAGTGCGGGCATAGCCTGCATAGTGTCCTGGCGCTGGGAGTTCCCCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000547530.7
CDS-3UTR TCA 90 bp GCCCGTCTGATGCTGAGGAGACCCGCGAGGCCCCCTGCCAGGACATCACCTGCCCTATGGCCGGCGCATTaGTGCAGAGCTCTCTTGCCA +
Preference number: 4 (lower is better)
Translates to: ARLMLRRPARPPARTSPALWPAH*CRALLP
Trigger: TGGCAAGAGAGCTCTGCATCAATGCGCCGGCCATAG...GGCAGGTGATGTCCTGGCAGGGGGCCTCGCGGGTCTCCTCAGCATCAGACGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000440513.7
ENST00000547530.7
CDS-3UTR TCA 90 bp AGCCCGTCTGATGCTGAGGAGACCCGCGAGGCCCCCTGCCAGGACATCACCTGCTTGGGGTCGCTGCTCTaGGAGGAGATGCATTCGCGG +
Preference number: 4 (lower is better)
Translates to: SPSDAEETREAPCQDITCLGSLL*EEMHSR
Trigger: CCGCGAATGCATCTCCTCTCAGAGCAGCGACCCCAA...GCAGGTGATGTCCTGGCAGGGGGCCTCGCGGGTCTCCTCAGCATCAGACGGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR TCA 90 bp CTGTCGGGCACTCAGTTCACCTGCCGGCAGCCGCAGGGCTCCTGGGCCCACAACCAGCTCACCGTCTCCTaGAGCATCTTTGGGGTCGCT +
Preference number: 4 (lower is better)
Translates to: LSGTQFTCRQPQGSWAHNQLTVS*SIFGVA
Trigger: AGCGACCCCAAAGATGCTTCAGGAGACGGTGAGCTG...GTTGTGGGCCCAGGAGCCCTGCGGCTGCCGGCAGGTGAACTGAGTGCCCGACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR TCA 90 bp GTCTGGCCTGCTGCGGGCCAAGTTGGGGCAGGACATACAGCCCATTCCATGGGGCGGCGTCCTCCTTCGTaGCAGCTTCCTGGCACTGGC +
Preference number: 4 (lower is better)
Translates to: VWPAAGQVGAGHTAHSMGRRPPS*QLPGTG
Trigger: GCCAGTGCCAGGAAGCTGTCACGAAGGAGGACGCCG...CCCCATGGAATGGGCTGTATGTCCTGCCCCAACTTGGCCCGCAGCAGGCCAGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR TCA 90 bp GCCCTGCACACACCCGGCCCACATCTGATCACACACATGCAGACGCTTGGTCCGCTCGTCGGCGTGGTATaGCACGGGCCCGCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: ALHTPGPHLITHMQTLGPLVGVV*HGPALH
Trigger: GTGGAGAGCGGGCCCGTGTCATACCACGCCGACGAG...CGGACCAAGCGTCTGCATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR TCA 90 bp CAGGCAGCGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCACACACATTCATCTGCAGGGCACTaGCGCAGGGCTCCCCGTCCT +
Preference number: 4 (lower is better)
Translates to: QAAGPSPAHTRPTSDHTHSSAGH*RRAPRP
Trigger: AGGACGGGGAGCCCTGCGTCAGTGCCCTGCAGATGA...ATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCGCTGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR TCA 90 bp GGGAGGATGAGGCCCCTGGGGGTCAGTGAGGCACGGCTCTGCCTCAAGGCCACCTGGGGTCCCACACTATaGAATCGCAGCTGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: GRMRPLGVSEARLCLKATWGPTL*NRSCGL
Trigger: GAGGCCACAGCTGCGATTTCATAGTGTGGGACCCCA...GGTGGCCTTGAGGCAGAGCCGTGCCTCACTGACCCCCAGGGGCCTCATCCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379932.8
ENST00000392557.8
ENST00000551787.5
CDS-3UTR TCA 90 bp TGGGGGTGTCTGCCTCGGACGAGGCAGGTATCTGGATGCAGGGCCACAGCTGGATGGAGGGTCCTTGGATaGGTCGACGGCAGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: WGCLPRTRQVSGCRATAGWRVLG*VDGRQR
Trigger: CCGCTGCCTGCCGTCGACTCATCCAAGGACCCTCCA...TCCAGCTGTGGCCCTGCATCCAGATACCTGCCTCGTCCGAGGCAGACACCCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR TCA 90 bp ACTGCCTACAGAGCTATGCTCAGGACGGGTGGGCGCCGGTCTCAGCTGTCGGGCCTCCAGAGCTGGTCCTaGGTCACAGGGCCAGCACAC +
Preference number: 4 (lower is better)
Translates to: TAYRAMLRTGGRRSQLSGLQSWS*VTGPAH
Trigger: GTGTGCTGGCCCTGTGACTCAGGACCAGCTCTGGAG...GCCCGACAGCTGAGACCGGCGCCCACCCGTCCTGAGCATAGCTCTGTAGGCAGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR TCA 90 bp GGGAGGATGAGGCCCCTGGGGGTCAGTGAGGCACGGCTCTGCCTCAAGGCCACCCAGCCATGCCAGAGCTaGGACCTCCTACGAGTGGTA +
Preference number: 4 (lower is better)
Translates to: GRMRPLGVSEARLCLKATQPCQS*DLLRVV
Trigger: TACCACTCGTAGGAGGTCTCAGCTCTGGCATGGCTG...GGTGGCCTTGAGGCAGAGCCGTGCCTCACTGACCCCCAGGGGCCTCATCCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000379932.8
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
ENST00000551787.5
CDS-3UTR GCA 90 bp GGGTCAGTGAGGCACGGCTCTGCCTCAAGGCCACCCCCTCCTAAGGACACAGGGGCGGTGTCCAGGCAGTaGTGGTTCAGCTGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: GSVRHGSASRPPPPKDTGAVSRQ*WFSCSW
Trigger: CCAGCTGCAGCTGAACCAGCACTGCCTGGACACCGC...CCCTGTGTCCTTAGGAGGGGGTGGCCTTGAGGCAGAGCCGTGCCTCACTGACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379937.6
ENST00000547530.7
CDS-3UTR GCA 90 bp GCAGGTGCCCTCCTGCCATGGAGACCCACACTCCCACAAGTCTCGGACTGTGACCGGCCGCGGGTCAGGTaGCTGCTCACGGCCATCTTG +
Preference number: 4 (lower is better)
Translates to: AGALLPWRPTLPQVSDCDRPRVR*LLTAIL
Trigger: CAAGATGGCCGTGAGCAGGCACCTGACCCGCGGCCG...GTCACAGTCCGAGACTTGTGGGAGTGTGGGTCTCCATGGCAGGAGGGCACCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548421.2
CDS-3UTR GCA 90 bp TGGGGGTGTCTGCCTCGGACGAGGCAGGTATCTGGATGCAGGGCCACAGCTGGAGGGCGCCGGCCTGTGTaGATCCAGTCCCGCTTCATC +
Preference number: 4 (lower is better)
Translates to: WGCLPRTRQVSGCRATAGGRRPV*IQSRFI
Trigger: GATGAAGCGGGACTGGATGCACACAGGCCGGCGCCC...TCCAGCTGTGGCCCTGCATCCAGATACCTGCCTCGTCCGAGGCAGACACCCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000547530.7
CDS-3UTR GCA 90 bp AGGATGAGGCCCCTGGGGGTCAGTGAGGCACGGCTCTGCCTCAAGGCCACCCCCGTCATGCATTCTGGCTaGAACCAGGAGCGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: RMRPLGVSEARLCLKATPVMHSG*NQERCS
Trigger: GGAGCAGCGCTCCTGGTTGCAGCCAGAATGCATGAC...GGGGGTGGCCTTGAGGCAGAGCCGTGCCTCACTGACCCCCAGGGGCCTCATCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000379932.8
ENST00000379937.6
ENST00000392557.8
ENST00000547530.7
ENST00000551787.5
CDS-3UTR GCA 90 bp CTGTCGGGCACTCAGTTCACCTGCCGGCAGCCGCAGGGCTCCTGGGCCCACAACGTCATGCATTCTGGCTaGAACCAGGAGCGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: LSGTQFTCRQPQGSWAHNVMHSG*NQERCS
Trigger: GGAGCAGCGCTCCTGGTTGCAGCCAGAATGCATGAC...GTTGTGGGCCCAGGAGCCCTGCGGCTGCCGGCAGGTGAACTGAGTGCCCGACAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000547530.7
CDS-3UTR GCA 90 bp GGACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGGTCATGCATTCTGGCTaGAACCAGGAGCGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: GRGLWDRCHLSPGVSALGVMHSG*NQERCS
Trigger: GGAGCAGCGCTCCTGGTTGCAGCCAGAATGCATGAC...CCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000547530.7
CDS-3UTR GCA 90 bp AGCCCGTCTGATGCTGAGGAGACCCGCGAGGCCCCCTGCCAGGACATCACCTGCATCCGCAGCTTCCTCTaGCCAGCTGTGTACGAGGGG +
Preference number: 4 (lower is better)
Translates to: SPSDAEETREAPCQDITCIRSFL*PAVYEG
Trigger: CCCCTCGTACACAGCTGGGCAGAGGAAGCTGCGGAT...GCAGGTGATGTCCTGGCAGGGGGCCTCGCGGGTCTCCTCAGCATCAGACGGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp CAGGCAGCGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCACACACATCTGCTGCTTCCGAGCTaGCGGGGGCACCACCAAGGA +
Preference number: 4 (lower is better)
Translates to: QAAGPSPAHTRPTSDHTHLLLPS*RGHHQG
Trigger: TCCTTGGTGGTGCCCCCGGCAGCTCGGAAGCAGCAG...ATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCGCTGCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp GCTCTGCCTCAAGGCCACCCCCTCCTAAGGACACAGGGTGAAGCCCCCTCGGCCGCTATGCTCGGGCTGTaGATCCTCCCTGTGCGGACT +
Preference number: 4 (lower is better)
Translates to: ALPQGHPLLRTQGEAPSAAMLGL*ILPVRT
Trigger: AGTCCGCACAGGGAGGATGCACAGCCCGAGCATAGC...GGCCGAGGGGGCTTCACCCTGTGTCCTTAGGAGGGGGTGGCCTTGAGGCAGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp GCGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCACACACATGCAGACGGTCAGCCCCACTTCTaGTGGCCGGCGTCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: AGPSPAHTRPTSDHTHADGQPHF*WPASSF
Trigger: GAAGGAGGACGCCGGCCAGCAGAAGTGGGGCTGACC...GTCTGCATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp GTGGGCGCCGGTCTCAGCTGTCGGGCACTCAGTTCACCTGCCGGCAGCCGCAGGACCTTCTTTGCTGGCTaGGTAGACACCAGAGGCCTC +
Preference number: 4 (lower is better)
Translates to: VGAGLSCRALSSPAGSRRTFFAG*VDTRGL
Trigger: GAGGCCTCTGGTGTCTACGCAGCCAGCAAAGAAGGT...CCTGCGGCTGCCGGCAGGTGAACTGAGTGCCCGACAGCTGAGACCGGCGCCCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp GTCGACGGCAGGCAGCGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCCGTGGCCACCTTCTTTaGTGGCTGCGTAGACACCAG +
Preference number: 4 (lower is better)
Translates to: VDGRQRDPALHTPGPHLIRGHLL*WLRRHQ
Trigger: CTGGTGTCTACGCAGCCAGCAAAGAAGGTGGCCACG...GATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCGCTGCCTGCCGTCGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp GCTCTGCCTCAAGGCCACCCCCTCCTAAGGACACAGGGTGAAGCCCCCTCGGCCACCCGAGATGCTGGCTaGGTCCTGTGGGGTTTCCTG +
Preference number: 4 (lower is better)
Translates to: ALPQGHPLLRTQGEAPSATRDAG*VLWGFL
Trigger: CAGGAAACCCCACAGGACGCAGCCAGCATCTCGGGT...GGCCGAGGGGGCTTCACCCTGTGTCCTTAGGAGGGGGTGGCCTTGAGGCAGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000392557.8
CDS-3UTR GCA 90 bp GTCGACGGCAGGCAGCGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCGACCAGCAGTGGGGCTaGCCCAAGCCTGTTTCCTTA +
Preference number: 4 (lower is better)
Translates to: VDGRQRDPALHTPGPHLIDQQWG*PKPVSL
Trigger: TAAGGAAACAGGCTTGGGGCAGCCCCACTGCTGGTC...GATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCGCTGCCTGCCGTCGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp GGACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGGACCAGCAGTGGGGCTaGCCCAAGCCTGTTTCCTTA +
Preference number: 4 (lower is better)
Translates to: GRGLWDRCHLSPGVSALGDQQWG*PKPVSL
Trigger: TAAGGAAACAGGCTTGGGGCAGCCCCACTGCTGGTC...CCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp CGACGGCAGGCAGCGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCACGACCAGCAGTGGGGCTaGCCCAAGCCTGTTTCCTTA +
Preference number: 4 (lower is better)
Translates to: RRQAAGPSPAHTRPTSDHDQQWG*PKPVSL
Trigger: TAAGGAAACAGGCTTGGGGCAGCCCCACTGCTGGTC...GTGATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCGCTGCCTGCCGTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp AGCCCGTCTGATGCTGAGGAGACCCGCGAGGCCCCCTGCCAGGACATCACCTGCAGGCAGGTATCTGGATaGAGGGCCACAGCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: SPSDAEETREAPCQDITCRQVSG*RATAGG
Trigger: GCCTCCAGCTGTGGCCCTGCATCCAGATACCTGCCT...GCAGGTGATGTCCTGGCAGGGGGCCTCGCGGGTCTCCTCAGCATCAGACGGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp GGGGACGGTGCGGAGGGTGGGCTGGAGACTCCAGAGCTGGTCCTGAGTCACAGGAGGCAGGTATCTGGATaGAGGGCCACAGCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: GDGAEGGLETPELVLSHRRQVSG*RATAGG
Trigger: GCCTCCAGCTGTGGCCCTGCATCCAGATACCTGCCT...CCTGTGACTCAGGACCAGCTCTGGAGTCTCCAGCCCACCCTCCGCACCGTCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp TCAGGAGGGGACGGTGCGGAGGGTGGGCTGGAGACTCCAGAGCTGGTCCTGAGTCTGCCTACAGAGCTATaGTCAGGACGGGTGGGCGCC +
Preference number: 4 (lower is better)
Translates to: SGGDGAEGGLETPELVLSLPTEL*SGRVGA
Trigger: GGCGCCCACCCGTCCTGAGCATAGCTCTGTAGGCAG...ACTCAGGACCAGCTCTGGAGTCTCCAGCCCACCCTCCGCACCGTCCCCTCCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp ACTGCCTACAGAGCTATGCTCAGGACGGGTGGGCGCCGGTCTCAGCTGTCGGGCCTGCCTACAGAGCTATaGTCAGGACGGGTGGGCGCC +
Preference number: 4 (lower is better)
Translates to: TAYRAMLRTGGRRSQLSGLPTEL*SGRVGA
Trigger: GGCGCCCACCCGTCCTGAGCATAGCTCTGTAGGCAG...GCCCGACAGCTGAGACCGGCGCCCACCCGTCCTGAGCATAGCTCTGTAGGCAGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp GTGGGCGCCGGTCTCAGCTGTCGGGCACTCAGTTCACCTGCCGGCAGCCGCAGGAGGCTATGCCCGCACTaGCTACAGAGCTATGCTCAG +
Preference number: 4 (lower is better)
Translates to: VGAGLSCRALSSPAGSRRRLCPH*LQSYAQ
Trigger: CTGAGCATAGCTCTGTAGGCAGTGCGGGCATAGCCT...CCTGCGGCTGCCGGCAGGTGAACTGAGTGCCCGACAGCTGAGACCGGCGCCCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp TGGCGCCGAGTGCTGCTCAGGAGGGGACGGTGCGGAGGGTGGGCTGGAGACTCCACACTATGCAGGCTATaGCCGCACTGCCTACAGAGC +
Preference number: 4 (lower is better)
Translates to: WRRVLLRRGRCGGWAGDSTLCRL*PHCLQS
Trigger: GCTCTGTAGGCAGTGCGGGCATAGCCTGCATAGTGT...GGAGTCTCCAGCCCACCCTCCGCACCGTCCCCTCCTGAGCAGCACTCGGCGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp GGCACGGCTCTGCCTCAAGGCCACCCCCTCCTAAGGACACAGGGTGAAGCCCCCAGCGCCAGGACACTATaGAGGCTATGCCCGCACTGC +
Preference number: 4 (lower is better)
Translates to: GTALPQGHPLLRTQGEAPSARTL*RLCPHC
Trigger: GCAGTGCGGGCATAGCCTGCATAGTGTCCTGGCGCT...GGGGGCTTCACCCTGTGTCCTTAGGAGGGGGTGGCCTTGAGGCAGAGCCGTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp CCCTCCTGCCATGGAGACCCACACTCCCACAAGTCTCGGACTGTGACCCCCATGCCAGCTCGATGTCCGTaGCGCCGCAACCGCGGCACA +
Preference number: 4 (lower is better)
Translates to: PSCHGDPHSHKSRTVTPMPARCP*RRNRGT
Trigger: TGTGCCGCGGTTGCGGCGGCACGGACATCGAGCTGG...CATGGGGGTCACAGTCCGAGACTTGTGGGAGTGTGGGTCTCCATGGCAGGAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548421.2
CDS-3UTR CCA 90 bp ATGGGACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGTTTTGCCAGCACCTaGCTCGCCGCAACCGCACCT +
Preference number: 4 (lower is better)
Translates to: MGRGLWDRCHLSPGVSALGFAST*LAATAP
Trigger: AGGTGCGGTTGCGGCGAGCCAGGTGCTGGCAAAACC...CAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTCCCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327359.7
ENST00000440513.7
CDS-3UTR CCA 90 bp GCCCGTCTGATGCTGAGGAGACCCGCGAGGCCCCCTGCCAGGACATCACCTGCCTTCCCCAGATTCACGTaGAAGCCGCCACCCAGAGTC +
Preference number: 4 (lower is better)
Translates to: ARLMLRRPARPPARTSPAFPRFT*KPPPRV
Trigger: GACTCTGGGTGGCGGCTTCCACGTGAATCTGGGGAA...GGCAGGTGATGTCCTGGCAGGGGGCCTCGCGGGTCTCCTCAGCATCAGACGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327359.7
ENST00000440513.7
ENST00000547530.7
CDS-3UTR CCA 90 bp ACATGGGACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCCCCAGGTGGTGGATGTaGCGCCTCCCATTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: TWDEGCGTGATCHQESRRPRWWM*RLPFCR
Trigger: CCTGCAGAATGGGAGGCGCCACATCCACCACCTGGG...GCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTCCCATGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327359.7
ENST00000440513.7
ENST00000547530.7
CDS-3UTR CCA 90 bp GACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCTGGTTCAGCTGCAGCTaGTTCCCCAGGTGGTGGATG +
Preference number: 4 (lower is better)
Translates to: DEGCGTGATCHQESRRWGWFSCS*FPRWWM
Trigger: CATCCACCACCTGGGGAACCAGCTGCAGCTGAACCA...GCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000440513.7
ENST00000547530.7
CDS-3UTR CCA 90 bp GCCCGTCTGATGCTGAGGAGACCCGCGAGGCCCCCTGCCAGGACATCACCTGCCGTGTCCAGGCAGTGCTaGTTCAGCTGCAGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: ARLMLRRPARPPARTSPAVSRQC*FSCSWF
Trigger: GAACCAGCTGCAGCTGAACCAGCACTGCCTGGACAC...GGCAGGTGATGTCCTGGCAGGGGGCCTCGCGGGTCTCCTCAGCATCAGACGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000440513.7
ENST00000547530.7
CDS-3UTR CCA 90 bp GGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCTGCCCAGGTGCGCAAAGCGTaGAATATACAGGCACGGGTC +
Preference number: 4 (lower is better)
Translates to: GLWDRCHLSPGVSALGPAQVRKA*NIQARV
Trigger: GACCCGTGCCTGTATATTCCACGCTTTGCGCACCTG...GGCAGGCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000547530.7
CDS-3UTR CCA 90 bp GTGGGCGCCGGTCTCAGCTGTCGGGCACTCAGTTCACCTGCCGGCAGCCGCAGGGCCTCAGGGCAGTCATaGACACCTCGTGGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: VGAGLSCRALSSPAGSRRASGQS*TPRGSS
Trigger: AGAAGAACCACGAGGTGTCCATGACTGCCCTGAGGC...CCTGCGGCTGCCGGCAGGTGAACTGAGTGCCCGACAGCTGAGACCGGCGCCCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000547530.7
CDS-3UTR CCA 90 bp CGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCACACACATGCAGACGCCTCGCCACACAAGCTaGACGCGGTGTCCTCGGTGG +
Preference number: 4 (lower is better)
Translates to: RDPALHTPGPHLITHMQTPRHTS*TRCPRW
Trigger: CCACCGAGGACACCGCGTCCAGCTTGTGTGGCGAGG...CGTCTGCATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp CAGGCAGCGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCACACACATCCTCGCCACACAAGCTaGACGCGGTGTCCTCGGTGG +
Preference number: 4 (lower is better)
Translates to: QAAGPSPAHTRPTSDHTHPRHTS*TRCPRW
Trigger: CCACCGAGGACACCGCGTCCAGCTTGTGTGGCGAGG...ATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCGCTGCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GTCTGGCCTGCTGCGGGCCAAGTTGGGGCAGGACATACAGCCCATTCCATGGGGCCTCGCCACACAAGCTaGACGCGGTGTCCTCGGTGG +
Preference number: 4 (lower is better)
Translates to: VWPAAGQVGAGHTAHSMGPRHTS*TRCPRW
Trigger: CCACCGAGGACACCGCGTCCAGCTTGTGTGGCGAGG...CCCCATGGAATGGGCTGTATGTCCTGCCCCAACTTGGCCCGCAGCAGGCCAGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp ACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCAAGTCTTTGTTCAGGTaGCTGGCCGCGGCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: TRAVGQVPPVTRSLGAGAKSLFR*LAAASS
Trigger: GCTGGAAGCCGCGGCCAGCCACCTGAACAAAGACTT...GGCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp ACTCTGGCAGAGGCTGCTGGCGCCGAGTGCTGCTCAGGAGGGGACGGTGCGGAGAAGTCTTTGTTCAGGTaGCTGGCCGCGGCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: TLAEAAGAECCSGGDGAEKSLFR*LAAASS
Trigger: GCTGGAAGCCGCGGCCAGCCACCTGAACAAAGACTT...CTCCGCACCGTCCCCTCCTGAGCAGCACTCGGCGCCAGCAGCCTCTGCCAGAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GCCCGTCTGATGCTGAGGAGACCCGCGAGGCCCCCTGCCAGGACATCACCTGCCAAGTCTTTGTTCAGGTaGCTGGCCGCGGCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: ARLMLRRPARPPARTSPAKSLFR*LAAASS
Trigger: GCTGGAAGCCGCGGCCAGCCACCTGAACAAAGACTT...GGCAGGTGATGTCCTGGCAGGGGGCCTCGCGGGTCTCCTCAGCATCAGACGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCTGCCCTCCTGAAGCATCTTTaGGGTCGCTGCTCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: GLWDRCHLSPGVSALGPALLKHL*GRCSER
Trigger: CCTCTCAGAGCAGCGACCCCAAAGATGCTTCAGGAG...GGCAGGCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCTGCCGGTACTGGCCTGAATTaGCTCCCGTCGCTTGCAAGA +
Preference number: 4 (lower is better)
Translates to: GLWDRCHLSPGVSALGPAGTGLN*LPSLAR
Trigger: TCTTGCAAGCGACGGGAGCCAATTCAGGCCAGTACC...GGCAGGCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp ACATGGGACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCCCTCCCTGGCGGTACTaGCCTGAATTGGCTCCCGTC +
Preference number: 4 (lower is better)
Translates to: TWDEGCGTGATCHQESRRPPWRY*PELAPV
Trigger: GACGGGAGCCAATTCAGGCCAGTACCGCCAGGGAGG...GCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTCCCATGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GGGTCAGTGAGGCACGGCTCTGCCTCAAGGCCACCCCCTCCTAAGGACACAGGGCCTCCCTGGCGGTACTaGCCTGAATTGGCTCCCGTC +
Preference number: 4 (lower is better)
Translates to: GSVRHGSASRPPPPKDTGPPWRY*PELAPV
Trigger: GACGGGAGCCAATTCAGGCCAGTACCGCCAGGGAGG...CCCTGTGTCCTTAGGAGGGGGTGGCCTTGAGGCAGAGCCGTGCCTCACTGACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCTGCCTGTCTCGATGGCCTCCCTaGCGGTACTGGCCTGAATTG +
Preference number: 4 (lower is better)
Translates to: AVGQVPPVTRSLGAGACLSRWPP*RYWPEL
Trigger: CAATTCAGGCCAGTACCGCCAGGGAGGCCATCGAGA...CAGGCAGGCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GCCCGTCTGATGCTGAGGAGACCCGCGAGGCCCCCTGCCAGGACATCACCTGCCTCTCGATGGCCTCCCTaGCGGTACTGGCCTGAATTG +
Preference number: 4 (lower is better)
Translates to: ARLMLRRPARPPARTSPASRWPP*RYWPEL
Trigger: CAATTCAGGCCAGTACCGCCAGGGAGGCCATCGAGA...GGCAGGTGATGTCCTGGCAGGGGGCCTCGCGGGTCTCCTCAGCATCAGACGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp TGGGACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGCCAGCATCTTCTCGATaGCCTCCCTGGCGGTACTGG +
Preference number: 4 (lower is better)
Translates to: WDEGCGTGATCHQESRRWPASSR*PPWRYW
Trigger: CCAGTACCGCCAGGGAGGCCATCGAGAAGATGCTGG...CCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTCCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp TCGGGCACTCAGTTCACCTGCCGGCAGCCGCAGGGCTCCTGGGCCCACAACTCAACAGCTTCCTGGCACTaGCGCTATGCTCGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: SGTQFTCRQPQGSWAHNSTASWH*RYARAV
Trigger: CACAGCCCGAGCATAGCGCCAGTGCCAGGAAGCTGT...TGAGTTGTGGGCCCAGGAGCCCTGCGGCTGCCGGCAGGTGAACTGAGTGCCCGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GACGGCAGGCAGCGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCACAACAGCTTCCTGGCACTaGCGCTATGCTCGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: DGRQRDPALHTPGPHLITTASWH*RYARAV
Trigger: CACAGCCCGAGCATAGCGCCAGTGCCAGGAAGCTGT...TGTGATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCGCTGCCTGCCGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp ACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCTTCGTGACAGCTTCCTaGCACTGGCGCTATGCTCGG +
Preference number: 4 (lower is better)
Translates to: TRAVGQVPPVTRSLGAGAFVTAS*HWRYAR
Trigger: CCGAGCATAGCGCCAGTGCCAGGAAGCTGTCACGAA...GGCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GGGAGGATGAGGCCCCTGGGGGTCAGTGAGGCACGGCTCTGCCTCAAGGCCACCGCAAAGCCTCTCCCGTaGCCACCTTCTTTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: GRMRPLGVSEARLCLKATAKPLP*PPSLLA
Trigger: AGCCAGCAAAGAAGGTGGCCACGGGAGAGGCTTTGC...GGTGGCCTTGAGGCAGAGCCGTGCCTCACTGACCCCCAGGGGCCTCATCCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GCCCTGCACACACCCGGCCCACATCTGATCACACACATGCAGACGCTTGGTCCGGCCTCCTCGTCGGCGTaGTATGACACGGGCCCGCTC +
Preference number: 4 (lower is better)
Translates to: ALHTPGPHLITHMQTLGPASSSA*YDTGPL
Trigger: GAGCGGGCCCGTGTCATACCACGCCGACGAGGAGGC...CGGACCAAGCGTCTGCATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCTGCCAGGACATCACCTGCCTaGAGGCCACACTTCAGTAGC +
Preference number: 4 (lower is better)
Translates to: GLWDRCHLSPGVSALGPARTSPA*RPHFSS
Trigger: GCTACTGAAGTGTGGCCTCCAGGCAGGTGATGTCCT...GGCAGGCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp CCTGCACACACCCGGCCCACATCTGATCACACACATGCAGACGCTTGGTCCGGTCAGGAGTCTCGGCGCTaGGGCCTGCCTGCTGCGGTC +
Preference number: 4 (lower is better)
Translates to: PAHTRPTSDHTHADAWSGQESRR*GLPAAV
Trigger: GACCGCAGCAGGCAGGCCCCAGCGCCGAGACTCCTG...ACCGGACCAAGCGTCTGCATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp TGCTGCTCAGGAGGGGACGGTGCGGAGGGTGGGCTGGAGACTCCAGAGCTGGTCATGGGACGAGGGCTGTaGGACAGGTGCCACCTGTCA +
Preference number: 4 (lower is better)
Translates to: CCSGGDGAEGGLETPELVMGRGL*DRCHLS
Trigger: TGACAGGTGGCACCTGTCCCACAGCCCTCGTCCCAT...GACCAGCTCTGGAGTCTCCAGCCCACCCTCCGCACCGTCCCCTCCTGAGCAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp AGCCCGTCTGATGCTGAGGAGACCCGCGAGGCCCCCTGCCAGGACATCACCTGCATGGGACGAGGGCTGTaGGACAGGTGCCACCTGTCA +
Preference number: 4 (lower is better)
Translates to: SPSDAEETREAPCQDITCMGRGL*DRCHLS
Trigger: TGACAGGTGGCACCTGTCCCACAGCCCTCGTCCCAT...GCAGGTGATGTCCTGGCAGGGGGCCTCGCGGGTCTCCTCAGCATCAGACGGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GGCACGGCTCTGCCTCAAGGCCACCCCCTCCTAAGGACACAGGGTGAAGCCCCCATGGGACGAGGGCTGTaGGACAGGTGCCACCTGTCA +
Preference number: 4 (lower is better)
Translates to: GTALPQGHPLLRTQGEAPMGRGL*DRCHLS
Trigger: TGACAGGTGGCACCTGTCCCACAGCCCTCGTCCCAT...GGGGGCTTCACCCTGTGTCCTTAGGAGGGGGTGGCCTTGAGGCAGAGCCGTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp ACTCTGGCAGAGGCTGCTGGCGCCGAGTGCTGCTCAGGAGGGGACGGTGCGGAGCATGACCCGAGATGCTaGCTGCGTCCTGTGGGGTTT +
Preference number: 4 (lower is better)
Translates to: TLAEAAGAECCSGGDGAEHDPRC*LRPVGF
Trigger: AAACCCCACAGGACGCAGCCAGCATCTCGGGTCATG...CTCCGCACCGTCCCCTCCTGAGCAGCACTCGGCGCCAGCAGCCTCTGCCAGAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392557.8
CDS-3UTR CCA 90 bp GCTCTGCCTCAAGGCCACCCCCTCCTAAGGACACAGGGTGAAGCCCCCTCGGCCCGGTGGGTGTGTCCTTaGCGGGTGCATCCACACACT +
Preference number: 4 (lower is better)
Translates to: ALPQGHPLLRTQGEAPSARWVCP*RVHPHT
Trigger: AGTGTGTGGATGCACCCGCCAAGGACACACCCACCG...GGCCGAGGGGGCTTCACCCTGTGTCCTTAGGAGGGGGTGGCCTTGAGGCAGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000392557.8
CDS-3UTR CCA 90 bp GGGGACGGTGCGGAGGGTGGGCTGGAGACTCCAGAGCTGGTCCTGAGTCACAGGGCCTTGGAGGGTCCTTaGATGAGTCGACGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: GDGAEGGLETPELVLSHRALEGP*MSRRQA
Trigger: TGCCTGCCGTCGACTCATCCAAGGACCCTCCAAGGC...CCTGTGACTCAGGACCAGCTCTGGAGTCTCCAGCCCACCCTCCGCACCGTCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp CTCCTAAGGACACAGGGTGAAGCCCCCTCGGCCACATCCGGGGCAGCCATGCCAAGCCCTCCACACACTTaGACCAGCAGTGGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: LLRTQGEAPSATSGAAMPSPPHT*TSSGAA
Trigger: GGCAGCCCCACTGCTGGTCCAAGTGTGTGGAGGGCT...TGGCATGGCTGCCCCGGATGTGGCCGAGGGGGCTTCACCCTGTGTCCTTAGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp TGGGGGTCAGTGAGGCACGGCTCTGCCTCAAGGCCACCCCCTCCTAAGGACACAGGACGGTGCGGAGGGTaGGCTGGAGACTCCAGAGCT +
Preference number: 4 (lower is better)
Translates to: WGSVRHGSASRPPPPKDTGRCGG*AGDSRA
Trigger: AGCTCTGGAGTCTCCAGCCCACCCTCCGCACCGTCC...TGTGTCCTTAGGAGGGGGTGGCCTTGAGGCAGAGCCGTGCCTCACTGACCCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp CAGGCAGCGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCACACACATTCTGGCAGAGGCTGCTaGCGCCGAGTGCTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: QAAGPSPAHTRPTSDHTHSGRGC*RRVLLR
Trigger: CCTGAGCAGCACTCGGCGCCAGCAGCCTCTGCCAGA...ATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCGCTGCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GTCGACGGCAGGCAGCGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCATGCAGGGCCACAGCTaGAGGCAGAGGACCTTCAAG +
Preference number: 4 (lower is better)
Translates to: VDGRQRDPALHTPGPHLIMQGHS*RQRTFK
Trigger: CTTGAAGGTCCTCTGCCTCCAGCTGTGGCCCTGCAT...GATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCGCTGCCTGCCGTCGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp AGGACACAGGGTGAAGCCCCCTCGGCCACATCCGGGGCAGCCATGCCAGAGCTGGACGAGGCAGGTATCTaGATGCAGGGCCACAGCTGG +
Preference number: 4 (lower is better)
Translates to: RTQGEAPSATSGAAMPELDEAGI*MQGHSW
Trigger: CCAGCTGTGGCCCTGCATCCAGATACCTGCCTCGTC...CAGCTCTGGCATGGCTGCCCCGGATGTGGCCGAGGGGGCTTCACCCTGTGTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GGGAGGATGAGGCCCCTGGGGGTCAGTGAGGCACGGCTCTGCCTCAAGGCCACCTCCTACGAGTGGTACTaGGGCCTTCCCACGAAGAGG +
Preference number: 4 (lower is better)
Translates to: GRMRPLGVSEARLCLKATSYEWY*GLPTKR
Trigger: CCTCTTCGTGGGAAGGCCCCAGTACCACTCGTAGGA...GGTGGCCTTGAGGCAGAGCCGTGCCTCACTGACCCCCAGGGGCCTCATCCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000379932.8
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
ENST00000551787.5
CDS-3UTR CCA 90 bp CTGTCGGGCACTCAGTTCACCTGCCGGCAGCCGCAGGGCTCCTGGGCCCACAACTCCTACGAGTGGTACTaGGGCCTTCCCACGAAGAGG +
Preference number: 4 (lower is better)
Translates to: LSGTQFTCRQPQGSWAHNSYEWY*GLPTKR
Trigger: CCTCTTCGTGGGAAGGCCCCAGTACCACTCGTAGGA...GTTGTGGGCCCAGGAGCCCTGCGGCTGCCGGCAGGTGAACTGAGTGCCCGACAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp TCGGGCACTCAGTTCACCTGCCGGCAGCCGCAGGGCTCCTGGGCCCACAACTCATGCTGCGGGCCAAGTTaGGGCAGGACATACAGCCCA +
Preference number: 4 (lower is better)
Translates to: SGTQFTCRQPQGSWAHNSCCGPS*GRTYSP
Trigger: TGGGCTGTATGTCCTGCCCCAACTTGGCCCGCAGCA...TGAGTTGTGGGCCCAGGAGCCCTGCGGCTGCCGGCAGGTGAACTGAGTGCCCGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GCCCTGCACACACCCGGCCCACATCTGATCACACACATGCAGACGCTTGGTCCGTCCAGGGACACGAACTaGCCCACGGCCGAGGAGCCG +
Preference number: 4 (lower is better)
Translates to: ALHTPGPHLITHMQTLGPSRDTN*PTAEEP
Trigger: CGGCTCCTCGGCCGTGGGCCAGTTCGTGTCCCTGGA...CGGACCAAGCGTCTGCATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379937.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCTGCCTGGTCCTCGCGGGTACCTaGTTGGCGCTGTCTCTCATT +
Preference number: 4 (lower is better)
Translates to: AVGQVPPVTRSLGAGACLVLAGT*LALSLI
Trigger: AATGAGAGACAGCGCCAACCAGGTACCCGCGAGGAC...CAGGCAGGCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440513.7
CDS-3UTR CCA 90 bp GCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCTGCCTGGCGAGCACAGGGAAGTaGGGCTGGCTTTTAGCCTTC +
Preference number: 4 (lower is better)
Translates to: AVGQVPPVTRSLGAGACLASTGK*GWLLAF
Trigger: GAAGGCTAAAAGCCAGCCCCACTTCCCTGTGCTCGC...CAGGCAGGCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440513.7
CDS-3UTR TCA 90 bp TGGGACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGCTATGGCCGGCGCATTaGTGCAGAGCTCTCTTGCCA +
Preference number: 4 (lower is better)
Translates to: WDEGCGTGATCHQESRRWLWPAH*CRALLP
Trigger: TGGCAAGAGAGCTCTGCATCAATGCGCCGGCCATAG...CCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000440513.7
ENST00000547530.7
CDS-3UTR TCA 90 bp AGCCCGTCTGATGCTGAGGAGACCCGCGAGGCCCCCTGCCAGGACATCACCTGCCTATGGCCGGCGCATTaGTGCAGAGCTCTCTTGCCA +
Preference number: 4 (lower is better)
Translates to: SPSDAEETREAPCQDITCLWPAH*CRALLP
Trigger: TGGCAAGAGAGCTCTGCATCAATGCGCCGGCCATAG...GCAGGTGATGTCCTGGCAGGGGGCCTCGCGGGTCTCCTCAGCATCAGACGGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000440513.7
ENST00000547530.7
CDS-3UTR TCA 90 bp ACATGGGACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTTGGGGTCGCTGCTCTaGGAGGAGATGCATTCGCGG +
Preference number: 4 (lower is better)
Translates to: TWDEGCGTGATCHQESRRLGSLL*EEMHSR
Trigger: CCGCGAATGCATCTCCTCTCAGAGCAGCGACCCCAA...GCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTCCCATGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR TCA 90 bp GGTGGGGGTGTCTGCCTCGGACGAGGCAGGTATCTGGATGCAGGGCCACAGCTGTTGGGGTCGCTGCTCTaGGAGGAGATGCATTCGCGG +
Preference number: 4 (lower is better)
Translates to: GGGVCLGRGRYLDAGPQLLGSLL*EEMHSR
Trigger: CCGCGAATGCATCTCCTCTCAGAGCAGCGACCCCAA...CAGCTGTGGCCCTGCATCCAGATACCTGCCTCGTCCGAGGCAGACACCCCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR TCA 90 bp GACGGCAGGCAGCGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCACACAGCTCACCGTCTCCTaGAGCATCTTTGGGGTCGCT +
Preference number: 4 (lower is better)
Translates to: DGRQRDPALHTPGPHLITQLTVS*SIFGVA
Trigger: AGCGACCCCAAAGATGCTTCAGGAGACGGTGAGCTG...TGTGATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCGCTGCCTGCCGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR TCA 90 bp CCTGCACACACCCGGCCCACATCTGATCACACACATGCAGACGCTTGGTCCGGTCTCGTCGGCGTGGTATaGCACGGGCCCGCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: PAHTRPTSDHTHADAWSGLVGVV*HGPALH
Trigger: GTGGAGAGCGGGCCCGTGTCATACCACGCCGACGAG...ACCGGACCAAGCGTCTGCATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR TCA 90 bp AACACCACACTGCCAGCCTTGGAGGGTCCTTGGATGAGTCGACGGCAGGCAGCGTCATCTGCAGGGCACTaGCGCAGGGCTCCCCGTCCT +
Preference number: 4 (lower is better)
Translates to: NTTLPALEGPWMSRRQAASSAGH*RRAPRP
Trigger: AGGACGGGGAGCCCTGCGTCAGTGCCCTGCAGATGA...CGCTGCCTGCCGTCGACTCATCCAAGGACCCTCCAAGGCTGGCAGTGTGGTGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR TCA 90 bp GCGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCACACACATGCAGACCCTAAGGACACAGGGTaGAGCCCCCTCGGCCACATC +
Preference number: 4 (lower is better)
Translates to: AGPSPAHTRPTSDHTHADPKDTG*SPLGHI
Trigger: GATGTGGCCGAGGGGGCTTCACCCTGTGTCCTTAGG...GTCTGCATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR TCA 90 bp AGGCAGCGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCACACACATGCCTAAGGACACAGGGTaGAGCCCCCTCGGCCACATC +
Preference number: 4 (lower is better)
Translates to: RQRDPALHTPGPHLITHMPKDTG*SPLGHI
Trigger: GATGTGGCCGAGGGGGCTTCACCCTGTGTCCTTAGG...CATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCGCTGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR TCA 90 bp GTTCACCCAGGCCTAGCTAACACCCAACCGTGCCCAGCATTGGCAGGTGCCCTCGCACAGACCGGCCACTaGGATGCGTGGAGGCACCTG +
Preference number: 4 (lower is better)
Translates to: VHPGLANTQPCPALAGALAQTGH*DAWRHL
Trigger: CAGGTGCCTCCACGCATCTCAGTGGCCGGTCTGTGC...GAGGGCACCTGCCAATGCTGGGCACGGTTGGGTGTTAGCTAGGCCTGGGTGAAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548421.2
CDS-3UTR GCA 90 bp ACATGGGACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCCCATTCTGCAGGGTCTaGGCTCTCGACTCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: TWDEGCGTGATCHQESRRPFCRV*ALDSFP
Trigger: GGGGAAGGAGTCGAGAGCGCAGACCCTGCAGAATGG...GCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTCCCATGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327359.7
ENST00000440513.7
ENST00000547530.7
CDS-3UTR GCA 90 bp GCAGGTGCCCTCCTGCCATGGAGACCCACACTCCCACAAGTCTCGGACTGTGACGGAGCATGTGCGGCGTaGCCTCCGTACGGCAGACCA +
Preference number: 4 (lower is better)
Translates to: AGALLPWRPTLPQVSDCDGACAA*PPYGRP
Trigger: TGGTCTGCCGTACGGAGGGCACGCCGCACATGCTCC...GTCACAGTCCGAGACTTGTGGGAGTGTGGGTCTCCATGGCAGGAGGGCACCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548421.2
CDS-3UTR GCA 90 bp AGCCCGTCTGATGCTGAGGAGACCCGCGAGGCCCCCTGCCAGGACATCACCTGCGTCATGCATTCTGGCTaGAACCAGGAGCGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: SPSDAEETREAPCQDITCVMHSG*NQERCS
Trigger: GGAGCAGCGCTCCTGGTTGCAGCCAGAATGCATGAC...GCAGGTGATGTCCTGGCAGGGGGCCTCGCGGGTCTCCTCAGCATCAGACGGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000547530.7
CDS-3UTR GCA 90 bp GTGGGCGCCGGTCTCAGCTGTCGGGCACTCAGTTCACCTGCCGGCAGCCGCAGGGTCCTCCTGAAGTCATaGATTCTGGCTGCAACCAGG +
Preference number: 4 (lower is better)
Translates to: VGAGLSCRALSSPAGSRRVLLKS*ILAATR
Trigger: CCTGGTTGCAGCCAGAATGCATGACTTCAGGAGGAC...CCTGCGGCTGCCGGCAGGTGAACTGAGTGCCCGACAGCTGAGACCGGCGCCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp ACATGGGACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCATCCGCAGCTTCCTCTaGCCAGCTGTGTACGAGGGG +
Preference number: 4 (lower is better)
Translates to: TWDEGCGTGATCHQESRRIRSFL*PAVYEG
Trigger: CCCCTCGTACACAGCTGGGCAGAGGAAGCTGCGGAT...GCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTCCCATGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp ATGGGACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGCTATGCTCGGGCTGTaGATCCTCCCTGTGCGGACT +
Preference number: 4 (lower is better)
Translates to: MGRGLWDRCHLSPGVSALAMLGL*ILPVRT
Trigger: AGTCCGCACAGGGAGGATGCACAGCCCGAGCATAGC...CAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTCCCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp CGACGGCAGGCAGCGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCACACCTTCTTTGCTGGCTaGGTAGACACCAGAGGCCTC +
Preference number: 4 (lower is better)
Translates to: RRQAAGPSPAHTRPTSDHTFFAG*VDTRGL
Trigger: GAGGCCTCTGGTGTCTACGCAGCCAGCAAAGAAGGT...GTGATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCGCTGCCTGCCGTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp GCCAGCCTTGGAGGGTCCTTGGATGAGTCGACGGCAGGCAGCGGGACCCAGCCCACCTTCTTTGCTGGCTaGGTAGACACCAGAGGCCTC +
Preference number: 4 (lower is better)
Translates to: ASLGGSLDESTAGSGTQPTFFAG*VDTRGL
Trigger: GAGGCCTCTGGTGTCTACGCAGCCAGCAAAGAAGGT...GGGCTGGGTCCCGCTGCCTGCCGTCGACTCATCCAAGGACCCTCCAAGGCTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp TGGGACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGCGTGGCCACCTTCTTTaGTGGCTGCGTAGACACCAG +
Preference number: 4 (lower is better)
Translates to: WDEGCGTGATCHQESRRWRGHLL*WLRRHQ
Trigger: CTGGTGTCTACGCAGCCAGCAAAGAAGGTGGCCACG...CCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp ACAGGGCCAGCACACTCAGCCCTCCACACACTTGGACCAGCAGTGGGGCTGCCCTTGCTGCCCATCATCTaGAGGGCACTGACGCAGGGC +
Preference number: 4 (lower is better)
Translates to: TGPAHSALHTLGPAVGLPLLPII*RALTQG
Trigger: GCCCTGCGTCAGTGCCCTGCAGATGATGGGCAGCAA...GGGCAGCCCCACTGCTGGTCCAAGTGTGTGGAGGGCTGAGTGTGCTGGCCCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp ATGGGACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGTTGCTGCCCATCATCTaGAGGGCACTGACGCAGGGC +
Preference number: 4 (lower is better)
Translates to: MGRGLWDRCHLSPGVSALLLPII*RALTQG
Trigger: GCCCTGCGTCAGTGCCCTGCAGATGATGGGCAGCAA...CAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTCCCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp CGACGGCAGGCAGCGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCACAGCCATAGTCGTTGCTaGCCATCATCTGCAGGGCAC +
Preference number: 4 (lower is better)
Translates to: RRQAAGPSPAHTRPTSDHSHSRC*PSSAGH
Trigger: GTGCCCTGCAGATGATGGGCAGCAACGACTATGGCT...GTGATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCGCTGCCTGCCGTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp GCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCTGCCTGAGCCATAGTCGTTGCTaGCCATCATCTGCAGGGCAC +
Preference number: 4 (lower is better)
Translates to: AVGQVPPVTRSLGAGACLSHSRC*PSSAGH
Trigger: GTGCCCTGCAGATGATGGGCAGCAACGACTATGGCT...CAGGCAGGCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp ACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCCACAGCCATAGTCGTTaGTGCCCATCATCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: TRAVGQVPPVTRSLGAGAHSHSR*CPSSAG
Trigger: CCCTGCAGATGATGGGCAGCAACGACTATGGCTGTG...GGCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp CAGGCAGCGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCACACACATGGGCTGTGGGACAGGTaGCACCTGTCACCAGGAGTC +
Preference number: 4 (lower is better)
Translates to: QAAGPSPAHTRPTSDHTHGLWDR*HLSPGV
Trigger: GACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCC...ATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCGCTGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp ATGGGACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGACTGCGGTGACAGGTaGACCCATGACCCGAGATGC +
Preference number: 4 (lower is better)
Translates to: MGRGLWDRCHLSPGVSALDCGDR*THDPRC
Trigger: GCATCTCGGGTCATGGGTGCACCTGTCACCGCAGTC...CAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTCCCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392557.8
CDS-3UTR GCA 90 bp AGGATGAGGCCCCTGGGGGTCAGTGAGGCACGGCTCTGCCTCAAGGCCACCCCCTGTTTAGCCCAGGACTaGGGTGACAGGTGCACCCAT +
Preference number: 4 (lower is better)
Translates to: RMRPLGVSEARLCLKATPCLAQD*GDRCTH
Trigger: ATGGGTGCACCTGTCACCGCAGTCCTGGGCTAAACA...GGGGGTGGCCTTGAGGCAGAGCCGTGCCTCACTGACCCCCAGGGGCCTCATCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000392557.8
CDS-3UTR GCA 90 bp TGGCGCCGAGTGCTGCTCAGGAGGGGACGGTGCGGAGGGTGGGCTGGAGACTCCCAGGTGATCTCCAGCTaGTCTGCATTCCACCAACAC +
Preference number: 4 (lower is better)
Translates to: WRRVLLRRGRCGGWAGDSQVISS*SAFHQH
Trigger: GTGTTGGTGGAATGCAGAGCAGCTGGAGATCACCTG...GGAGTCTCCAGCCCACCCTCCGCACCGTCCCCTCCTGAGCAGCACTCGGCGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392557.8
CDS-3UTR GCA 90 bp ACTCTGGCAGAGGCTGCTGGCGCCGAGTGCTGCTCAGGAGGGGACGGTGCGGAGCCTTCAAGGAGCTGCTaGCTCTCAAGTGCCAGATCC +
Preference number: 4 (lower is better)
Translates to: TLAEAAGAECCSGGDGAEPSRSC*LSSARS
Trigger: GGATCTGGCACTTGAGAGGCAGCAGCTCCTTGAAGG...CTCCGCACCGTCCCCTCCTGAGCAGCACTCGGCGCCAGCAGCCTCTGCCAGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp GTCGACGGCAGGCAGCGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCGGACCTTCAAGGAGCTaGTGCCTCTCAAGTGCCAGA +
Preference number: 4 (lower is better)
Translates to: VDGRQRDPALHTPGPHLIGPSRS*CLSSAR
Trigger: TCTGGCACTTGAGAGGCAGCAGCTCCTTGAAGGTCC...GATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCGCTGCCTGCCGTCGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp TGGGGGTGTCTGCCTCGGACGAGGCAGGTATCTGGATGCAGGGCCACAGCTGGACTGCCTACAGAGCTATaGTCAGGACGGGTGGGCGCC +
Preference number: 4 (lower is better)
Translates to: WGCLPRTRQVSGCRATAGLPTEL*SGRVGA
Trigger: GGCGCCCACCCGTCCTGAGCATAGCTCTGTAGGCAG...TCCAGCTGTGGCCCTGCATCCAGATACCTGCCTCGTCCGAGGCAGACACCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp CTGTCGGGCACTCAGTTCACCTGCCGGCAGCCGCAGGGCTCCTGGGCCCACAACAGGCTATGCCCGCACTaGCTACAGAGCTATGCTCAG +
Preference number: 4 (lower is better)
Translates to: LSGTQFTCRQPQGSWAHNRLCPH*LQSYAQ
Trigger: CTGAGCATAGCTCTGTAGGCAGTGCGGGCATAGCCT...GTTGTGGGCCCAGGAGCCCTGCGGCTGCCGGCAGGTGAACTGAGTGCCCGACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp GCCCGTCTGATGCTGAGGAGACCCGCGAGGCCCCCTGCCAGGACATCACCTGCCACACTATGCAGGCTATaGCCGCACTGCCTACAGAGC +
Preference number: 4 (lower is better)
Translates to: ARLMLRRPARPPARTSPATLCRL*PHCLQS
Trigger: GCTCTGTAGGCAGTGCGGGCATAGCCTGCATAGTGT...GGCAGGTGATGTCCTGGCAGGGGGCCTCGCGGGTCTCCTCAGCATCAGACGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp ACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCACACTATGCAGGCTATaGCCGCACTGCCTACAGAGC +
Preference number: 4 (lower is better)
Translates to: TRAVGQVPPVTRSLGAGATLCRL*PHCLQS
Trigger: GCTCTGTAGGCAGTGCGGGCATAGCCTGCATAGTGT...GGCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp CTCAGGACGGGTGGGCGCCGGTCTCAGCTGTCGGGCACTCAGTTCACCTGCCGGCTGCTCTCCACGAACTaGACCTCGGACACGATGATG +
Preference number: 4 (lower is better)
Translates to: LRTGGRRSQLSGTQFTCRLLSTN*TSDTMM
Trigger: CATCATCGTGTCCGAGGTGCAGTTCGTGGAGAGCAG...CCGGCAGGTGAACTGAGTGCCCGACAGCTGAGACCGGCGCCCACCCGTCCTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379937.6
ENST00000547530.7
CDS-3UTR GCA 90 bp AACACCACACTGCCAGCCTTGGAGGGTCCTTGGATGAGTCGACGGCAGGCAGCGAGGAGCCGCCGCCGCTaGTCTCCACGAACTGCACCT +
Preference number: 4 (lower is better)
Translates to: NTTLPALEGPWMSRRQAARSRRR*SPRTAP
Trigger: AGGTGCAGTTCGTGGAGAGCAGCGGCGGCGGCTCCT...CGCTGCCTGCCGTCGACTCATCCAAGGACCCTCCAAGGCTGGCAGTGTGGTGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379937.6
ENST00000547530.7
CDS-3UTR GCA 90 bp GGTGCCCTCCTGCCATGGAGACCCACACTCCCACAAGTCTCGGACTGTGACCCCTGGCAGGTGCCCTCCTaGCATGGAGACCCACACTCC +
Preference number: 4 (lower is better)
Translates to: GALLPWRPTLPQVSDCDPWQVPS*HGDPHS
Trigger: GGAGTGTGGGTCTCCATGGCAGGAGGGCACCTGCCA...GGGGTCACAGTCCGAGACTTGTGGGAGTGTGGGTCTCCATGGCAGGAGGGCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548421.2
CDS-3UTR CCA 90 bp AGCCCGTCTGATGCTGAGGAGACCCGCGAGGCCCCCTGCCAGGACATCACCTGCTGGTTCAGCTGCAGCTaGTTCCCCAGGTGGTGGATG +
Preference number: 4 (lower is better)
Translates to: SPSDAEETREAPCQDITCWFSCS*FPRWWM
Trigger: CATCCACCACCTGGGGAACCAGCTGCAGCTGAACCA...GCAGGTGATGTCCTGGCAGGGGGCCTCGCGGGTCTCCTCAGCATCAGACGGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000440513.7
ENST00000547530.7
CDS-3UTR CCA 90 bp TCGGGCACTCAGTTCACCTGCCGGCAGCCGCAGGGCTCCTGGGCCCACAACTCATGGTTCAGCTGCAGCTaGTTCCCCAGGTGGTGGATG +
Preference number: 4 (lower is better)
Translates to: SGTQFTCRQPQGSWAHNSWFSCS*FPRWWM
Trigger: CATCCACCACCTGGGGAACCAGCTGCAGCTGAACCA...TGAGTTGTGGGCCCAGGAGCCCTGCGGCTGCCGGCAGGTGAACTGAGTGCCCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379937.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GTCGACGGCAGGCAGCGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCACGTACACATTCACCTaGAGCAGGTCGCTGAGGTCC +
Preference number: 4 (lower is better)
Translates to: VDGRQRDPALHTPGPHLITYTFT*SRSLRS
Trigger: GGACCTCAGCGACCTGCTCCAGGTGAATGTGTACGT...GATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCGCTGCCTGCCGTCGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GGACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGACGTACACATTCACCTaGAGCAGGTCGCTGAGGTCC +
Preference number: 4 (lower is better)
Translates to: GRGLWDRCHLSPGVSALGTYTFT*SRSLRS
Trigger: GGACCTCAGCGACCTGCTCCAGGTGAATGTGTACGT...CCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000440513.7
ENST00000547530.7
CDS-3UTR CCA 90 bp AGGATGAGGCCCCTGGGGGTCAGTGAGGCACGGCTCTGCCTCAAGGCCACCCCCCAGGTGCGCAAAGCGTaGAATATACAGGCACGGGTC +
Preference number: 4 (lower is better)
Translates to: RMRPLGVSEARLCLKATPQVRKA*NIQARV
Trigger: GACCCGTGCCTGTATATTCCACGCTTTGCGCACCTG...GGGGGTGGCCTTGAGGCAGAGCCGTGCCTCACTGACCCCCAGGGGCCTCATCCT
64% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000379932.8
ENST00000379937.6
ENST00000392557.8
ENST00000547530.7
ENST00000551787.5
CDS-3UTR CCA 90 bp GGACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCAGGTGCGCAAAGCGTaGAATATACAGGCACGGGTC +
Preference number: 4 (lower is better)
Translates to: GRGLWDRCHLSPGVSALGQVRKA*NIQARV
Trigger: GACCCGTGCCTGTATATTCCACGCTTTGCGCACCTG...CCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000547530.7
CDS-3UTR CCA 90 bp ACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCCAGGTGCGCAAAGCGTaGAATATACAGGCACGGGTC +
Preference number: 4 (lower is better)
Translates to: TRAVGQVPPVTRSLGAGAQVRKA*NIQARV
Trigger: GACCCGTGCCTGTATATTCCACGCTTTGCGCACCTG...GGCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000547530.7
CDS-3UTR CCA 90 bp GCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCTGCCTGGCCTCAGGGCAGTCATaGACACCTCGTGGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: AVGQVPPVTRSLGAGACLASGQS*TPRGSS
Trigger: AGAAGAACCACGAGGTGTCCATGACTGCCCTGAGGC...CAGGCAGGCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000547530.7
CDS-3UTR CCA 90 bp GGGAGGATGAGGCCCCTGGGGGTCAGTGAGGCACGGCTCTGCCTCAAGGCCACCGCCTCAGGGCAGTCATaGACACCTCGTGGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: GRMRPLGVSEARLCLKATASGQS*TPRGSS
Trigger: AGAAGAACCACGAGGTGTCCATGACTGCCCTGAGGC...GGTGGCCTTGAGGCAGAGCCGTGCCTCACTGACCCCCAGGGGCCTCATCCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379932.8
ENST00000379937.6
ENST00000392557.8
ENST00000547530.7
ENST00000551787.5
CDS-3UTR CCA 90 bp ACAGGGCCAGCACACTCAGCCCTCCACACACTTGGACCAGCAGTGGGGCTGCCCACGCGGTGTCCTCGGTaGAGCCATCTTTTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: TGPAHSALHTLGPAVGLPTRCPR*SHLLPG
Trigger: GCCTGGCAAAAGATGGCTCCACCGAGGACACCGCGT...GGGCAGCCCCACTGCTGGTCCAAGTGTGTGGAGGGCTGAGTGTGCTGGCCCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp AGGACACAGGGTGAAGCCCCCTCGGCCACATCCGGGGCAGCCATGCCAGAGCTGAAGTCTTTGTTCAGGTaGCTGGCCGCGGCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: RTQGEAPSATSGAAMPELKSLFR*LAAASS
Trigger: GCTGGAAGCCGCGGCCAGCCACCTGAACAAAGACTT...CAGCTCTGGCATGGCTGCCCCGGATGTGGCCGAGGGGGCTTCACCCTGTGTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp CTGTCGGGCACTCAGTTCACCTGCCGGCAGCCGCAGGGCTCCTGGGCCCACAACAGATGCATTCGCGGATaGAGTCTGAGATGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: LSGTQFTCRQPQGSWAHNRCIRG*SLRCPG
Trigger: GCCTGGGCATCTCAGACTCCATCCGCGAATGCATCT...GTTGTGGGCCCAGGAGCCCTGCGGCTGCCGGCAGGTGAACTGAGTGCCCGACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp ACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCAGATGCATTCGCGGATaGAGTCTGAGATGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: TRAVGQVPPVTRSLGAGARCIRG*SLRCPG
Trigger: GCCTGGGCATCTCAGACTCCATCCGCGAATGCATCT...GGCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GTCGACGGCAGGCAGCGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCAGATGCATTCGCGGATaGAGTCTGAGATGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: VDGRQRDPALHTPGPHLIRCIRG*SLRCPG
Trigger: GCCTGGGCATCTCAGACTCCATCCGCGAATGCATCT...GATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCGCTGCCTGCCGTCGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp ACTCTGGCAGAGGCTGCTGGCGCCGAGTGCTGCTCAGGAGGGGACGGTGCGGAGAGATGCATTCGCGGATaGAGTCTGAGATGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: TLAEAAGAECCSGGDGAERCIRG*SLRCPG
Trigger: GCCTGGGCATCTCAGACTCCATCCGCGAATGCATCT...CTCCGCACCGTCCCCTCCTGAGCAGCACTCGGCGCCAGCAGCCTCTGCCAGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCTGCCTGCTCCTGAAGCATCTTTaGGGTCGCTGCTCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: AVGQVPPVTRSLGAGACLLLKHL*GRCSER
Trigger: CCTCTCAGAGCAGCGACCCCAAAGATGCTTCAGGAG...CAGGCAGGCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GTCGACGGCAGGCAGCGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCGGTACTGGCCTGAATTaGCTCCCGTCGCTTGCAAGA +
Preference number: 4 (lower is better)
Translates to: VDGRQRDPALHTPGPHLIGTGLN*LPSLAR
Trigger: TCTTGCAAGCGACGGGAGCCAATTCAGGCCAGTACC...GATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCGCTGCCTGCCGTCGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp ACTCTGGCAGAGGCTGCTGGCGCCGAGTGCTGCTCAGGAGGGGACGGTGCGGAGGGTACTGGCCTGAATTaGCTCCCGTCGCTTGCAAGA +
Preference number: 4 (lower is better)
Translates to: TLAEAAGAECCSGGDGAEGTGLN*LPSLAR
Trigger: TCTTGCAAGCGACGGGAGCCAATTCAGGCCAGTACC...CTCCGCACCGTCCCCTCCTGAGCAGCACTCGGCGCCAGCAGCCTCTGCCAGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp ACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCGGTACTGGCCTGAATTaGCTCCCGTCGCTTGCAAGA +
Preference number: 4 (lower is better)
Translates to: TRAVGQVPPVTRSLGAGAGTGLN*LPSLAR
Trigger: TCTTGCAAGCGACGGGAGCCAATTCAGGCCAGTACC...GGCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GCTCTGCCTCAAGGCCACCCCCTCCTAAGGACACAGGGTGAAGCCCCCTCGGCCTCTCGATGGCCTCCCTaGCGGTACTGGCCTGAATTG +
Preference number: 4 (lower is better)
Translates to: ALPQGHPLLRTQGEAPSASRWPP*RYWPEL
Trigger: CAATTCAGGCCAGTACCGCCAGGGAGGCCATCGAGA...GGCCGAGGGGGCTTCACCCTGTGTCCTTAGGAGGGGGTGGCCTTGAGGCAGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GGGTGGGGGTGTCTGCCTCGGACGAGGCAGGTATCTGGATGCAGGGCCACAGCTACAGCTTCCTGGCACTaGCGCTATGCTCGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: GWGCLPRTRQVSGCRATATASWH*RYARAV
Trigger: CACAGCCCGAGCATAGCGCCAGTGCCAGGAAGCTGT...AGCTGTGGCCCTGCATCCAGATACCTGCCTCGTCCGAGGCAGACACCCCCACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp TGGGACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGTTCGTGACAGCTTCCTaGCACTGGCGCTATGCTCGG +
Preference number: 4 (lower is better)
Translates to: WDEGCGTGATCHQESRRWFVTAS*HWRYAR
Trigger: CCGAGCATAGCGCCAGTGCCAGGAAGCTGTCACGAA...CCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp ACGGGGAACTCCCAGCGCCAGGACACTATGCAGGCTATGCCCGCACTGCCTACACAGCCCCACTTCTGCTaGCCGGCGTCCTCCTTCGTG +
Preference number: 4 (lower is better)
Translates to: TGNSQRQDTMQAMPALPTQPHFC*PASSFV
Trigger: CACGAAGGAGGACGCCGGCCAGCAGAAGTGGGGCTG...TGTAGGCAGTGCGGGCATAGCCTGCATAGTGTCCTGGCGCTGGGAGTTCCCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GGGTGGGGGTGTCTGCCTCGGACGAGGCAGGTATCTGGATGCAGGGCCACAGCTGCTCAGCTCCGAGGGTaGGAGAGCTTGGGAGCAAAG +
Preference number: 4 (lower is better)
Translates to: GWGCLPRTRQVSGCRATAAQLRG*ESLGAK
Trigger: CTTTGCTCCCAAGCTCTCCCACCCTCGGAGCTGAGC...AGCTGTGGCCCTGCATCCAGATACCTGCCTCGTCCGAGGCAGACACCCCCACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GGACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGAGGACATCACCTGCCTaGAGGCCACACTTCAGTAGC +
Preference number: 4 (lower is better)
Translates to: GRGLWDRCHLSPGVSALGRTSPA*RPHFSS
Trigger: GCTACTGAAGTGTGGCCTCCAGGCAGGTGATGTCCT...CCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GGGTCAGTGAGGCACGGCTCTGCCTCAAGGCCACCCCCTCCTAAGGACACAGGGATGGGACGAGGGCTGTaGGACAGGTGCCACCTGTCA +
Preference number: 4 (lower is better)
Translates to: GSVRHGSASRPPPPKDTGMGRGL*DRCHLS
Trigger: TGACAGGTGGCACCTGTCCCACAGCCCTCGTCCCAT...CCCTGTGTCCTTAGGAGGGGGTGGCCTTGAGGCAGAGCCGTGCCTCACTGACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp AACACCACACTGCCAGCCTTGGAGGGTCCTTGGATGAGTCGACGGCAGGCAGCGCAGCTGTGGCCTCGGTaGGTGTGTCCTTGGCGGGTG +
Preference number: 4 (lower is better)
Translates to: NTTLPALEGPWMSRRQAAQLWPR*VCPWRV
Trigger: CACCCGCCAAGGACACACCCACCGAGGCCACAGCTG...CGCTGCCTGCCGTCGACTCATCCAAGGACCCTCCAAGGCTGGCAGTGTGGTGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392557.8
CDS-3UTR CCA 90 bp AGGATGAGGCCCCTGGGGGTCAGTGAGGCACGGCTCTGCCTCAAGGCCACCCCCATGAAATCGCAGCTGTaGCCTCGGTGGGTGTGTCCT +
Preference number: 4 (lower is better)
Translates to: RMRPLGVSEARLCLKATPMKSQL*PRWVCP
Trigger: AGGACACACCCACCGAGGCCACAGCTGCGATTTCAT...GGGGGTGGCCTTGAGGCAGAGCCGTGCCTCACTGACCCCCAGGGGCCTCATCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000379932.8
ENST00000392557.8
ENST00000551787.5
CDS-3UTR CCA 90 bp AGGATGAGGCCCCTGGGGGTCAGTGAGGCACGGCTCTGCCTCAAGGCCACCCCCATGGAAACAGACGGCTaGGACAGAAACCACGGCCAC +
Preference number: 4 (lower is better)
Translates to: RMRPLGVSEARLCLKATPMETDG*DRNHGH
Trigger: GTGGCCGTGGTTTCTGTCCCAGCCGTCTGTTTCCAT...GGGGGTGGCCTTGAGGCAGAGCCGTGCCTCACTGACCCCCAGGGGCCTCATCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000379932.8
ENST00000392557.8
ENST00000551787.5
CDS-3UTR CCA 90 bp ACTGCCTACAGAGCTATGCTCAGGACGGGTGGGCGCCGGTCTCAGCTGTCGGGCGCCTTGGAGGGTCCTTaGATGAGTCGACGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: TAYRAMLRTGGRRSQLSGALEGP*MSRRQA
Trigger: TGCCTGCCGTCGACTCATCCAAGGACCCTCCAAGGC...GCCCGACAGCTGAGACCGGCGCCCACCCGTCCTGAGCATAGCTCTGTAGGCAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp CTCCTAAGGACACAGGGTGAAGCCCCCTCGGCCACATCCGGGGCAGCCATGCCAACACCTGCAGGGCTCTaGCTTCCACTCTGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: LLRTQGEAPSATSGAAMPTPAGL*LPLWQR
Trigger: CCTCTGCCAGAGTGGAAGCCAGAGCCCTGCAGGTGT...TGGCATGGCTGCCCCGGATGTGGCCGAGGGGGCTTCACCCTGTGTCCTTAGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GGTGGGGGTGTCTGCCTCGGACGAGGCAGGTATCTGGATGCAGGGCCACAGCTGGACGAGGCAGGTATCTaGATGCAGGGCCACAGCTGG +
Preference number: 4 (lower is better)
Translates to: GGGVCLGRGRYLDAGPQLDEAGI*MQGHSW
Trigger: CCAGCTGTGGCCCTGCATCCAGATACCTGCCTCGTC...CAGCTGTGGCCCTGCATCCAGATACCTGCCTCGTCCGAGGCAGACACCCCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GCGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCACACACATGCAGACTATGCTCAGGACGGGTaGGCGCCGGTCTCAGCTGTC +
Preference number: 4 (lower is better)
Translates to: AGPSPAHTRPTSDHTHADYAQDG*APVSAV
Trigger: GACAGCTGAGACCGGCGCCCACCCGTCCTGAGCATA...GTCTGCATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GGGGACGGTGCGGAGGGTGGGCTGGAGACTCCAGAGCTGGTCCTGAGTCACAGGTCCTACGAGTGGTACTaGGGCCTTCCCACGAAGAGG +
Preference number: 4 (lower is better)
Translates to: GDGAEGGLETPELVLSHRSYEWY*GLPTKR
Trigger: CCTCTTCGTGGGAAGGCCCCAGTACCACTCGTAGGA...CCTGTGACTCAGGACCAGCTCTGGAGTCTCCAGCCCACCCTCCGCACCGTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GGCACGGCTCTGCCTCAAGGCCACCCCCTCCTAAGGACACAGGGTGAAGCCCCCTCCTACGAGTGGTACTaGGGCCTTCCCACGAAGAGG +
Preference number: 4 (lower is better)
Translates to: GTALPQGHPLLRTQGEAPSYEWY*GLPTKR
Trigger: CCTCTTCGTGGGAAGGCCCCAGTACCACTCGTAGGA...GGGGGCTTCACCCTGTGTCCTTAGGAGGGGGTGGCCTTGAGGCAGAGCCGTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
ENST00000551787.5
CDS-3UTR CCA 90 bp ACGGCTCTGCCTCAAGGCCACCCCCTCCTAAGGACACAGGGTGAAGCCCCCTCGGAGACCTCCTACGAGTaGTACTGGGGCCTTCCCACG +
Preference number: 4 (lower is better)
Translates to: TALPQGHPLLRTQGEAPSETSYE*YWGLPT
Trigger: CGTGGGAAGGCCCCAGTACCACTCGTAGGAGGTCTC...CGAGGGGGCTTCACCCTGTGTCCTTAGGAGGGGGTGGCCTTGAGGCAGAGCCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
ENST00000551787.5
CDS-3UTR CCA 90 bp GCTGCGGGCCAAGTTGGGGCAGGACATACAGCCCATTCCATGGGGAGGATGAGGTGGCAGGACCCAGGCTaGCTACTGAGCTCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: AAGQVGAGHTAHSMGRMRWQDPG*LLSSGR
Trigger: CCGCCCAGAGCTCAGTAGCCAGCCTGGGTCCTGCCA...CCTCATCCTCCCCATGGAATGGGCTGTATGTCCTGCCCCAACTTGGCCCGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp AGGATGAGGCCCCTGGGGGTCAGTGAGGCACGGCTCTGCCTCAAGGCCACCCCCTCAGCAATTCTATCCTaGCACCCCCGGAGACAGCTG +
Preference number: 4 (lower is better)
Translates to: RMRPLGVSEARLCLKATPSAILS*HPRRQL
Trigger: CAGCTGTCTCCGGGGGTGCCAGGATAGAATTGCTGA...GGGGGTGGCCTTGAGGCAGAGCCGTGCCTCACTGACCCCCAGGGGCCTCATCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000379932.8
CDS-3UTR CCA 90 bp GGGAGGATGAGGCCCCTGGGGGTCAGTGAGGCACGGCTCTGCCTCAAGGCCACCACAGGCACGGGTCTCTaGCGGCTCAGCAATTCTATC +
Preference number: 4 (lower is better)
Translates to: GRMRPLGVSEARLCLKATTGTGL*RLSNSI
Trigger: GATAGAATTGCTGAGCCGCCAGAGACCCGTGCCTGT...GGTGGCCTTGAGGCAGAGCCGTGCCTCACTGACCCCCAGGGGCCTCATCCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379932.8
CDS-3UTR TCA 90 bp ACAGGGCCAGCACACTCAGCCCTCCACACACTTGGACCAGCAGTGGGGCTGCCCCTATGGCCGGCGCATTaGTGCAGAGCTCTCTTGCCA +
Preference number: 4 (lower is better)
Translates to: TGPAHSALHTLGPAVGLPLWPAH*CRALLP
Trigger: TGGCAAGAGAGCTCTGCATCAATGCGCCGGCCATAG...GGGCAGCCCCACTGCTGGTCCAAGTGTGTGGAGGGCTGAGTGTGCTGGCCCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379937.6
ENST00000547530.7
CDS-3UTR TCA 90 bp AGGATGAGGCCCCTGGGGGTCAGTGAGGCACGGCTCTGCCTCAAGGCCACCCCCCCTTCACAGTCCTCCTaGAGTCATGCATTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: RMRPLGVSEARLCLKATPPSQSS*SHAFWL
Trigger: CAGCCAGAATGCATGACTTCAGGAGGACTGTGAAGG...GGGGGTGGCCTTGAGGCAGAGCCGTGCCTCACTGACCCCCAGGGGCCTCATCCT
63% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000379932.8
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
ENST00000551787.5
CDS-3UTR TCA 90 bp CGACGGCAGGCAGCGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCACCCTTCACAGTCCTCCTaGAGTCATGCATTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: RRQAAGPSPAHTRPTSDHPSQSS*SHAFWL
Trigger: CAGCCAGAATGCATGACTTCAGGAGGACTGTGAAGG...GTGATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCGCTGCCTGCCGTCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR TCA 90 bp AGGCAGCGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCACACACATGTTGGGGTCGCTGCTCTaGGAGGAGATGCATTCGCGG +
Preference number: 4 (lower is better)
Translates to: RQRDPALHTPGPHLITHMLGSLL*EEMHSR
Trigger: CCGCGAATGCATCTCCTCTCAGAGCAGCGACCCCAA...CATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCGCTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR TCA 90 bp GGGTGGGGGTGTCTGCCTCGGACGAGGCAGGTATCTGGATGCAGGGCCACAGCTCAGCTCACCGTCTCCTaGAGCATCTTTGGGGTCGCT +
Preference number: 4 (lower is better)
Translates to: GWGCLPRTRQVSGCRATAQLTVS*SIFGVA
Trigger: AGCGACCCCAAAGATGCTTCAGGAGACGGTGAGCTG...AGCTGTGGCCCTGCATCCAGATACCTGCCTCGTCCGAGGCAGACACCCCCACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR TCA 90 bp ATGGGACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGCAGCTCACCGTCTCCTaGAGCATCTTTGGGGTCGCT +
Preference number: 4 (lower is better)
Translates to: MGRGLWDRCHLSPGVSALQLTVS*SIFGVA
Trigger: AGCGACCCCAAAGATGCTTCAGGAGACGGTGAGCTG...CAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTCCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR TCA 90 bp ACAGGGCCAGCACACTCAGCCCTCCACACACTTGGACCAGCAGTGGGGCTGCCCCAGCTCACCGTCTCCTaGAGCATCTTTGGGGTCGCT +
Preference number: 4 (lower is better)
Translates to: TGPAHSALHTLGPAVGLPQLTVS*SIFGVA
Trigger: AGCGACCCCAAAGATGCTTCAGGAGACGGTGAGCTG...GGGCAGCCCCACTGCTGGTCCAAGTGTGTGGAGGGCTGAGTGTGCTGGCCCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR TCA 90 bp ACGGCTCTGCCTCAAGGCCACCCCCTCCTAAGGACACAGGGTGAAGCCCCCTCGGGTCATCAATGCCACTaGGGTCCAGCTCACCGTCTC +
Preference number: 4 (lower is better)
Translates to: TALPQGHPLLRTQGEAPSGHQCH*GPAHRL
Trigger: GAGACGGTGAGCTGGACCTCAGTGGCATTGATGACC...CGAGGGGGCTTCACCCTGTGTCCTTAGGAGGGGGTGGCCTTGAGGCAGAGCCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR TCA 90 bp ACAGGGCCAGCACACTCAGCCCTCCACACACTTGGACCAGCAGTGGGGCTGCCCGGTCATCAATGCCACTaGGGTCCAGCTCACCGTCTC +
Preference number: 4 (lower is better)
Translates to: TGPAHSALHTLGPAVGLPGHQCH*GPAHRL
Trigger: GAGACGGTGAGCTGGACCTCAGTGGCATTGATGACC...GGGCAGCCCCACTGCTGGTCCAAGTGTGTGGAGGGCTGAGTGTGCTGGCCCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR TCA 90 bp CTGCACACACCCGGCCCACATCTGATCACACACATGCAGACGCTTGGTCCGGTTGGGGAGGAACCCTCCTaGCAGCCAGGCCTCTGGAGC +
Preference number: 4 (lower is better)
Translates to: LHTPGPHLITHMQTLGPVGEEPS*QPGLWS
Trigger: GCTCCAGAGGCCTGGCTGTCAGGAGGGTTCCTCCCC...AACCGGACCAAGCGTCTGCATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392557.8
CDS-3UTR TCA 90 bp ACGGCTCTGCCTCAAGGCCACCCCCTCCTAAGGACACAGGGTGAAGCCCCCTCGTGGGGTCCCACACTATaGAATCGCAGCTGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: TALPQGHPLLRTQGEAPSWGPTL*NRSCGL
Trigger: GAGGCCACAGCTGCGATTTCATAGTGTGGGACCCCA...CGAGGGGGCTTCACCCTGTGTCCTTAGGAGGGGGTGGCCTTGAGGCAGAGCCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000392557.8
ENST00000551787.5
CDS-3UTR TCA 90 bp ACGGCTCTGCCTCAAGGCCACCCCCTCCTAAGGACACAGGGTGAAGCCCCCTCGCAGCCATGCCAGAGCTaGGACCTCCTACGAGTGGTA +
Preference number: 4 (lower is better)
Translates to: TALPQGHPLLRTQGEAPSQPCQS*DLLRVV
Trigger: TACCACTCGTAGGAGGTCTCAGCTCTGGCATGGCTG...CGAGGGGGCTTCACCCTGTGTCCTTAGGAGGGGGTGGCCTTGAGGCAGAGCCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
ENST00000551787.5
CDS-3UTR TCA 90 bp ACTGCCTACAGAGCTATGCTCAGGACGGGTGGGCGCCGGTCTCAGCTGTCGGGCCAGCCATGCCAGAGCTaGGACCTCCTACGAGTGGTA +
Preference number: 4 (lower is better)
Translates to: TAYRAMLRTGGRRSQLSGQPCQS*DLLRVV
Trigger: TACCACTCGTAGGAGGTCTCAGCTCTGGCATGGCTG...GCCCGACAGCTGAGACCGGCGCCCACCCGTCCTGAGCATAGCTCTGTAGGCAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR TCA 90 bp TCAGGAGGGGACGGTGCGGAGGGTGGGCTGGAGACTCCAGAGCTGGTCCTGAGTGCACCTCGGACACGATaGTGTTGTCCTCCAGCACTG +
Preference number: 4 (lower is better)
Translates to: SGGDGAEGGLETPELVLSAPRTR*CCPPAL
Trigger: CAGTGCTGGAGGACAACATCATCGTGTCCGAGGTGC...ACTCAGGACCAGCTCTGGAGTCTCCAGCCCACCCTCCGCACCGTCCCCTCCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379937.6
ENST00000547530.7
CDS-3UTR TCA 90 bp GGGTGGGGGTGTCTGCCTCGGACGAGGCAGGTATCTGGATGCAGGGCCACAGCTGCACCTCGGACACGATaGTGTTGTCCTCCAGCACTG +
Preference number: 4 (lower is better)
Translates to: GWGCLPRTRQVSGCRATAAPRTR*CCPPAL
Trigger: CAGTGCTGGAGGACAACATCATCGTGTCCGAGGTGC...AGCTGTGGCCCTGCATCCAGATACCTGCCTCGTCCGAGGCAGACACCCCCACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379937.6
ENST00000547530.7
CDS-3UTR TCA 90 bp AGGATGAGGCCCCTGGGGGTCAGTGAGGCACGGCTCTGCCTCAAGGCCACCCCCCCCACCACAACCTGCTaGTCCTTTCTGTTGCTGATG +
Preference number: 4 (lower is better)
Translates to: RMRPLGVSEARLCLKATPPTTTC*SFLLLM
Trigger: CATCAGCAACAGAAAGGATCAGCAGGTTGTGGTGGG...GGGGGTGGCCTTGAGGCAGAGCCGTGCCTCACTGACCCCCAGGGGCCTCATCCT
63% GC, longest homopolymer 8 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000379932.8
CDS-3UTR TCA 90 bp AAGTTCACTGTTCACCCAGGCCTAGCTAACACCCAACCGTGCCCAGCATTGGCAAGCGGGGCCTACCGGTaGGCGCAGCCGAGGACTGGC +
Preference number: 4 (lower is better)
Translates to: KFTVHPGLANTQPCPALASGAYR*AQPRTG
Trigger: GCCAGTCCTCGGCTGCGCTCACCGGTAGGCCCCGCT...TGCCAATGCTGGGCACGGTTGGGTGTTAGCTAGGCCTGGGTGAACAGTGAACTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548421.2
CDS-3UTR GCA 90 bp CGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCACACACATGCAGACGCCATTCTGCAGGGTCTaGGCTCTCGACTCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: RDPALHTPGPHLITHMQTPFCRV*ALDSFP
Trigger: GGGGAAGGAGTCGAGAGCGCAGACCCTGCAGAATGG...CGTCTGCATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327359.7
ENST00000547530.7
CDS-3UTR GCA 90 bp GCAGGTGCCCTCCTGCCATGGAGACCCACACTCCCACAAGTCTCGGACTGTGACTGGCGCCTCCCATTCTaGAGGGTCTGCGCTCTCGAC +
Preference number: 4 (lower is better)
Translates to: AGALLPWRPTLPQVSDCDWRLPF*RVCALD
Trigger: GTCGAGAGCGCAGACCCTGCAGAATGGGAGGCGCCA...GTCACAGTCCGAGACTTGTGGGAGTGTGGGTCTCCATGGCAGGAGGGCACCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548421.2
CDS-3UTR GCA 90 bp CAGGCAGCGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCACACACATCAGTGCTGGTTCAGCTaGAGCTGGTTCCCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: QAAGPSPAHTRPTSDHTHQCWFS*SWFPRW
Trigger: CCACCTGGGGAACCAGCTGCAGCTGAACCAGCACTG...ATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCGCTGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000547530.7
CDS-3UTR GCA 90 bp GCGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCACACACATGCAGACCAGTGCTGGTTCAGCTaGAGCTGGTTCCCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: AGPSPAHTRPTSDHTHADQCWFS*SWFPRW
Trigger: CCACCTGGGGAACCAGCTGCAGCTGAACCAGCACTG...GTCTGCATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000547530.7
CDS-3UTR GCA 90 bp GCAGGTGCCCTCCTGCCATGGAGACCCACACTCCCACAAGTCTCGGACTGTGACGCGGTGTCCAGGCAGTaGTGGTTCAGCTGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: AGALLPWRPTLPQVSDCDAVSRQ*WFSCSW
Trigger: CCAGCTGCAGCTGAACCAGCACTGCCTGGACACCGC...GTCACAGTCCGAGACTTGTGGGAGTGTGGGTCTCCATGGCAGGAGGGCACCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548421.2
CDS-3UTR GCA 90 bp GGGTCAGTGAGGCACGGCTCTGCCTCAAGGCCACCCCCTCCTAAGGACACAGGGGTCATGCATTCTGGCTaGAACCAGGAGCGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: GSVRHGSASRPPPPKDTGVMHSG*NQERCS
Trigger: GGAGCAGCGCTCCTGGTTGCAGCCAGAATGCATGAC...CCCTGTGTCCTTAGGAGGGGGTGGCCTTGAGGCAGAGCCGTGCCTCACTGACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000547530.7
ENST00000551787.5
CDS-3UTR GCA 90 bp GACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCGTCCTCCTGAAGTCATaGATTCTGGCTGCAACCAGG +
Preference number: 4 (lower is better)
Translates to: DEGCGTGATCHQESRRWGVLLKS*ILAATR
Trigger: CCTGGTTGCAGCCAGAATGCATGACTTCAGGAGGAC...GCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp AGGATGAGGCCCCTGGGGGTCAGTGAGGCACGGCTCTGCCTCAAGGCCACCCCCGTCCTCCTGAAGTCATaGATTCTGGCTGCAACCAGG +
Preference number: 4 (lower is better)
Translates to: RMRPLGVSEARLCLKATPVLLKS*ILAATR
Trigger: CCTGGTTGCAGCCAGAATGCATGACTTCAGGAGGAC...GGGGGTGGCCTTGAGGCAGAGCCGTGCCTCACTGACCCCCAGGGGCCTCATCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000379932.8
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
ENST00000551787.5
CDS-3UTR GCA 90 bp GCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCTGCCTGGTCCTCCTGAAGTCATaGATTCTGGCTGCAACCAGG +
Preference number: 4 (lower is better)
Translates to: AVGQVPPVTRSLGAGACLVLLKS*ILAATR
Trigger: CCTGGTTGCAGCCAGAATGCATGACTTCAGGAGGAC...CAGGCAGGCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp CGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCACACACATGCAGACGATCCGCAGCTTCCTCTaGCCAGCTGTGTACGAGGGG +
Preference number: 4 (lower is better)
Translates to: RDPALHTPGPHLITHMQTIRSFL*PAVYEG
Trigger: CCCCTCGTACACAGCTGGGCAGAGGAAGCTGCGGAT...CGTCTGCATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp TGGGGGTCAGTGAGGCACGGCTCTGCCTCAAGGCCACCCCCTCCTAAGGACACAATCCGCAGCTTCCTCTaGCCAGCTGTGTACGAGGGG +
Preference number: 4 (lower is better)
Translates to: WGSVRHGSASRPPPPKDTIRSFL*PAVYEG
Trigger: CCCCTCGTACACAGCTGGGCAGAGGAAGCTGCGGAT...TGTGTCCTTAGGAGGGGGTGGCCTTGAGGCAGAGCCGTGCCTCACTGACCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
ENST00000551787.5
CDS-3UTR GCA 90 bp GTCGACGGCAGGCAGCGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCTGCTCTGAGAGGAGATaGATTCGCGGATGGAGTCTG +
Preference number: 4 (lower is better)
Translates to: VDGRQRDPALHTPGPHLICSERR*IRGWSL
Trigger: CAGACTCCATCCGCGAATGCATCTCCTCTCAGAGCA...GATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCGCTGCCTGCCGTCGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp TGGCGCCGAGTGCTGCTCAGGAGGGGACGGTGCGGAGGGTGGGCTGGAGACTCCCATCTTTGGGGTCGCTaGTCTGAGAGGAGATGCATT +
Preference number: 4 (lower is better)
Translates to: WRRVLLRRGRCGGWAGDSHLWGR*SERRCI
Trigger: AATGCATCTCCTCTCAGAGCAGCGACCCCAAAGATG...GGAGTCTCCAGCCCACCCTCCGCACCGTCCCCTCCTGAGCAGCACTCGGCGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp GCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCTGCCTGTTGGCTCCCGTCGCTTaGAAGACTTCTTGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: AVGQVPPVTRSLGAGACLLAPVA*KTSWAC
Trigger: ACAAGCCCAAGAAGTCTTGCAAGCGACGGGAGCCAA...CAGGCAGGCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp CAGGCAGCGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCACACACATGCTATGCTCGGGCTGTaGATCCTCCCTGTGCGGACT +
Preference number: 4 (lower is better)
Translates to: QAAGPSPAHTRPTSDHTHAMLGL*ILPVRT
Trigger: AGTCCGCACAGGGAGGATGCACAGCCCGAGCATAGC...ATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCGCTGCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp GCGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCACACACATGCAGACGCTATGCTCGGGCTGTaGATCCTCCCTGTGCGGACT +
Preference number: 4 (lower is better)
Translates to: AGPSPAHTRPTSDHTHADAMLGL*ILPVRT
Trigger: AGTCCGCACAGGGAGGATGCACAGCCCGAGCATAGC...GTCTGCATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp GCCCTGCACACACCCGGCCCACATCTGATCACACACATGCAGACGCTTGGTCCGCTGGCACTGGCGCTATaGTCGGGCTGTGCATCCTCC +
Preference number: 4 (lower is better)
Translates to: ALHTPGPHLITHMQTLGPLALAL*SGCASS
Trigger: GGAGGATGCACAGCCCGAGCATAGCGCCAGTGCCAG...CGGACCAAGCGTCTGCATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp GCTGCGGGCCAAGTTGGGGCAGGACATACAGCCCATTCCATGGGGAGGATGAGGCTGGCACTGGCGCTATaGTCGGGCTGTGCATCCTCC +
Preference number: 4 (lower is better)
Translates to: AAGQVGAGHTAHSMGRMRLALAL*SGCASS
Trigger: GGAGGATGCACAGCCCGAGCATAGCGCCAGTGCCAG...CCTCATCCTCCCCATGGAATGGGCTGTATGTCCTGCCCCAACTTGGCCCGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp GGTGGGGGTGTCTGCCTCGGACGAGGCAGGTATCTGGATGCAGGGCCACAGCTGCGTGGCCACCTTCTTTaGTGGCTGCGTAGACACCAG +
Preference number: 4 (lower is better)
Translates to: GGGVCLGRGRYLDAGPQLRGHLL*WLRRHQ
Trigger: CTGGTGTCTACGCAGCCAGCAAAGAAGGTGGCCACG...CAGCTGTGGCCCTGCATCCAGATACCTGCCTCGTCCGAGGCAGACACCCCCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp GCGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCACACACATGCAGACTTGCTGCCCATCATCTaGAGGGCACTGACGCAGGGC +
Preference number: 4 (lower is better)
Translates to: AGPSPAHTRPTSDHTHADLLPII*RALTQG
Trigger: GCCCTGCGTCAGTGCCCTGCAGATGATGGGCAGCAA...GTCTGCATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp CAGGCAGCGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCACACACATTTGCTGCCCATCATCTaGAGGGCACTGACGCAGGGC +
Preference number: 4 (lower is better)
Translates to: QAAGPSPAHTRPTSDHTHLLPII*RALTQG
Trigger: GCCCTGCGTCAGTGCCCTGCAGATGATGGGCAGCAA...ATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCGCTGCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp AGCCCGTCTGATGCTGAGGAGACCCGCGAGGCCCCCTGCCAGGACATCACCTGCAGCCATAGTCGTTGCTaGCCATCATCTGCAGGGCAC +
Preference number: 4 (lower is better)
Translates to: SPSDAEETREAPCQDITCSHSRC*PSSAGH
Trigger: GTGCCCTGCAGATGATGGGCAGCAACGACTATGGCT...GCAGGTGATGTCCTGGCAGGGGGCCTCGCGGGTCTCCTCAGCATCAGACGGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp GGGGACGGTGCGGAGGGTGGGCTGGAGACTCCAGAGCTGGTCCTGAGTCACAGGCACAGCCATAGTCGTTaGTGCCCATCATCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: GDGAEGGLETPELVLSHRHSHSR*CPSSAG
Trigger: CCCTGCAGATGATGGGCAGCAACGACTATGGCTGTG...CCTGTGACTCAGGACCAGCTCTGGAGTCTCCAGCCCACCCTCCGCACCGTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp GCTGCGGGCCAAGTTGGGGCAGGACATACAGCCCATTCCATGGGGAGGATGAGGGGGCTGTGGGACAGGTaGCACCTGTCACCAGGAGTC +
Preference number: 4 (lower is better)
Translates to: AAGQVGAGHTAHSMGRMRGLWDR*HLSPGV
Trigger: GACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCC...CCTCATCCTCCCCATGGAATGGGCTGTATGTCCTGCCCCAACTTGGCCCGCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp TGGGGGTCAGTGAGGCACGGCTCTGCCTCAAGGCCACCCCCTCCTAAGGACACACAAACGGCTTGGCCGTaGGGAGTTACGCACCCACCT +
Preference number: 4 (lower is better)
Translates to: WGSVRHGSASRPPPPKDTQTAWP*GVTHPP
Trigger: AGGTGGGTGCGTAACTCCGCACGGCCAAGCCGTTTG...TGTGTCCTTAGGAGGGGGTGGCCTTGAGGCAGAGCCGTGCCTCACTGACCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000392557.8
CDS-3UTR GCA 90 bp GGACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGTGTGTCCTTGGCGGGTaGATCCACACACTTTCTCTC +
Preference number: 4 (lower is better)
Translates to: GRGLWDRCHLSPGVSALGCVLGG*IHTLSL
Trigger: GAGAGAAAGTGTGTGGATGCACCCGCCAAGGACACA...CCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392557.8
CDS-3UTR GCA 90 bp GCCCTGCACACACCCGGCCCACATCTGATCACACACATGCAGACGCTTGGTCCGCTGCCTACAGAGCTATaGTCAGGACGGGTGGGCGCC +
Preference number: 4 (lower is better)
Translates to: ALHTPGPHLITHMQTLGPLPTEL*SGRVGA
Trigger: GGCGCCCACCCGTCCTGAGCATAGCTCTGTAGGCAG...CGGACCAAGCGTCTGCATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp TCGGGCACTCAGTTCACCTGCCGGCAGCCGCAGGGCTCCTGGGCCCACAACTCAAGGCTATGCCCGCACTaGCTACAGAGCTATGCTCAG +
Preference number: 4 (lower is better)
Translates to: SGTQFTCRQPQGSWAHNSRLCPH*LQSYAQ
Trigger: CTGAGCATAGCTCTGTAGGCAGTGCGGGCATAGCCT...TGAGTTGTGGGCCCAGGAGCCCTGCGGCTGCCGGCAGGTGAACTGAGTGCCCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp CCTGCACACACCCGGCCCACATCTGATCACACACATGCAGACGCTTGGTCCGGTAGTGAGGCACGGCTCTaGCTCAAGGCCACCCCCTCC +
Preference number: 4 (lower is better)
Translates to: PAHTRPTSDHTHADAWSGSEARL*LKATPS
Trigger: GGAGGGGGTGGCCTTGAGGCAGAGCCGTGCCTCACT...ACCGGACCAAGCGTCTGCATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp ACGGGGAACTCCCAGCGCCAGGACACTATGCAGGCTATGCCCGCACTGCCTACACCCAGGTGGTGGATGTaGCGCCTCCCATTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: TGNSQRQDTMQAMPALPTPRWWM*RLPFCR
Trigger: CCTGCAGAATGGGAGGCGCCACATCCACCACCTGGG...TGTAGGCAGTGCGGGCATAGCCTGCATAGTGTCCTGGCGCTGGGAGTTCCCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547530.7
CDS-3UTR CCA 90 bp AGGCAGCGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCACACACATGTGGTTCCCCAGGTGGTaGATGTGGCGCCTCCCATTC +
Preference number: 4 (lower is better)
Translates to: RQRDPALHTPGPHLITHMWFPRW*MWRLPF
Trigger: GAATGGGAGGCGCCACATCCACCACCTGGGGAACCA...CATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCGCTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327359.7
ENST00000547530.7
CDS-3UTR CCA 90 bp GTTCACCCAGGCCTAGCTAACACCCAACCGTGCCCAGCATTGGCAGGTGCCCTCAGCTGGTTCCCCAGGTaGTGGATGTGGCGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: VHPGLANTQPCPALAGALSWFPR*WMWRLP
Trigger: TGGGAGGCGCCACATCCACCACCTGGGGAACCAGCT...GAGGGCACCTGCCAATGCTGGGCACGGTTGGGTGTTAGCTAGGCCTGGGTGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548421.2
CDS-3UTR CCA 90 bp ACGGCTCTGCCTCAAGGCCACCCCCTCCTAAGGACACAGGGTGAAGCCCCCTCGTGGTTCAGCTGCAGCTaGTTCCCCAGGTGGTGGATG +
Preference number: 4 (lower is better)
Translates to: TALPQGHPLLRTQGEAPSWFSCS*FPRWWM
Trigger: CATCCACCACCTGGGGAACCAGCTGCAGCTGAACCA...CGAGGGGGCTTCACCCTGTGTCCTTAGGAGGGGGTGGCCTTGAGGCAGAGCCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000379937.6
ENST00000547530.7
CDS-3UTR CCA 90 bp TGGGACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGACGTACACATTCACCTaGAGCAGGTCGCTGAGGTCC +
Preference number: 4 (lower is better)
Translates to: WDEGCGTGATCHQESRRWTYTFT*SRSLRS
Trigger: GGACCTCAGCGACCTGCTCCAGGTGAATGTGTACGT...CCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000440513.7
ENST00000547530.7
CDS-3UTR CCA 90 bp GACGGCAGGCAGCGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCACACAGGTGCGCAAAGCGTaGAATATACAGGCACGGGTC +
Preference number: 4 (lower is better)
Translates to: DGRQRDPALHTPGPHLITQVRKA*NIQARV
Trigger: GACCCGTGCCTGTATATTCCACGCTTTGCGCACCTG...TGTGATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCGCTGCCTGCCGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000547530.7
CDS-3UTR CCA 90 bp TGGGGGTGTCTGCCTCGGACGAGGCAGGTATCTGGATGCAGGGCCACAGCTGGAACGCGGTGTCCTCGGTaGAGCCATCTTTTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: WGCLPRTRQVSGCRATAGTRCPR*SHLLPG
Trigger: GCCTGGCAAAAGATGGCTCCACCGAGGACACCGCGT...TCCAGCTGTGGCCCTGCATCCAGATACCTGCCTCGTCCGAGGCAGACACCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GGGGACGGTGCGGAGGGTGGGCTGGAGACTCCAGAGCTGGTCCTGAGTCACAGGCTCCTGAAGCATCTTTaGGGTCGCTGCTCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: GDGAEGGLETPELVLSHRLLKHL*GRCSER
Trigger: CCTCTCAGAGCAGCGACCCCAAAGATGCTTCAGGAG...CCTGTGACTCAGGACCAGCTCTGGAGTCTCCAGCCCACCCTCCGCACCGTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp TGGGACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGCTCCTGAAGCATCTTTaGGGTCGCTGCTCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: WDEGCGTGATCHQESRRWLLKHL*GRCSER
Trigger: CCTCTCAGAGCAGCGACCCCAAAGATGCTTCAGGAG...CCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GGGGACGGTGCGGAGGGTGGGCTGGAGACTCCAGAGCTGGTCCTGAGTCACAGGGGTACTGGCCTGAATTaGCTCCCGTCGCTTGCAAGA +
Preference number: 4 (lower is better)
Translates to: GDGAEGGLETPELVLSHRGTGLN*LPSLAR
Trigger: TCTTGCAAGCGACGGGAGCCAATTCAGGCCAGTACC...CCTGTGACTCAGGACCAGCTCTGGAGTCTCCAGCCCACCCTCCGCACCGTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp ACATGGGACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTCTCGATGGCCTCCCTaGCGGTACTGGCCTGAATTG +
Preference number: 4 (lower is better)
Translates to: TWDEGCGTGATCHQESRRSRWPP*RYWPEL
Trigger: CAATTCAGGCCAGTACCGCCAGGGAGGCCATCGAGA...GCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTCCCATGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp CGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCACACACATGCAGACGACAGCTTCCTGGCACTaGCGCTATGCTCGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: RDPALHTPGPHLITHMQTTASWH*RYARAV
Trigger: CACAGCCCGAGCATAGCGCCAGTGCCAGGAAGCTGT...CGTCTGCATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp ATGGGACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGCAAAGCCTCTCCCGTaGCCACCTTCTTTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: MGRGLWDRCHLSPGVSALAKPLP*PPSLLA
Trigger: AGCCAGCAAAGAAGGTGGCCACGGGAGAGGCTTTGC...CAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTCCCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GGGGACGGTGCGGAGGGTGGGCTGGAGACTCCAGAGCTGGTCCTGAGTCACAGGAGGACATCACCTGCCTaGAGGCCACACTTCAGTAGC +
Preference number: 4 (lower is better)
Translates to: GDGAEGGLETPELVLSHRRTSPA*RPHFSS
Trigger: GCTACTGAAGTGTGGCCTCCAGGCAGGTGATGTCCT...CCTGTGACTCAGGACCAGCTCTGGAGTCTCCAGCCCACCCTCCGCACCGTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp AGGCAGCGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCACACACATGATGGGACGAGGGCTGTaGGACAGGTGCCACCTGTCA +
Preference number: 4 (lower is better)
Translates to: RQRDPALHTPGPHLITHMMGRGL*DRCHLS
Trigger: TGACAGGTGGCACCTGTCCCACAGCCCTCGTCCCAT...CATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCGCTGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCTGCCTGATGGTAAGTTCCACATaGGACGAGGGCTGTGGGACA +
Preference number: 4 (lower is better)
Translates to: AVGQVPPVTRSLGAGACLMVSST*DEGCGT
Trigger: TGTCCCACAGCCCTCGTCCCATGTGGAACTTACCAT...CAGGCAGGCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCATGGTAAGTTCCACATaGGACGAGGGCTGTGGGACA +
Preference number: 4 (lower is better)
Translates to: DEGCGTGATCHQESRRWGMVSST*DEGCGT
Trigger: TGTCCCACAGCCCTCGTCCCATGTGGAACTTACCAT...GCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp ACATGGGACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCGCTTTCCAAACGGCTTaGCCGTGCGGAGTTACGCAC +
Preference number: 4 (lower is better)
Translates to: TWDEGCGTGATCHQESRRAFQTA*PCGVTH
Trigger: GTGCGTAACTCCGCACGGCCAAGCCGTTTGGAAAGC...GCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTCCCATGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392557.8
CDS-3UTR CCA 90 bp TGGGGGTGTCTGCCTCGGACGAGGCAGGTATCTGGATGCAGGGCCACAGCTGGACACTTGGACCAGCAGTaGGGCTGCCCCAAGCCTGTT +
Preference number: 4 (lower is better)
Translates to: WGCLPRTRQVSGCRATAGHLDQQ*GCPKPV
Trigger: AACAGGCTTGGGGCAGCCCCACTGCTGGTCCAAGTG...TCCAGCTGTGGCCCTGCATCCAGATACCTGCCTCGTCCGAGGCAGACACCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GTCTGGCCTGCTGCGGGCCAAGTTGGGGCAGGACATACAGCCCATTCCATGGGGACACCTGCAGGGCTCTaGCTTCCACTCTGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: VWPAAGQVGAGHTAHSMGTPAGL*LPLWQR
Trigger: CCTCTGCCAGAGTGGAAGCCAGAGCCCTGCAGGTGT...CCCCATGGAATGGGCTGTATGTCCTGCCCCAACTTGGCCCGCAGCAGGCCAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp CGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCACACACATGCAGACGGACGAGGCAGGTATCTaGATGCAGGGCCACAGCTGG +
Preference number: 4 (lower is better)
Translates to: RDPALHTPGPHLITHMQTDEAGI*MQGHSW
Trigger: CCAGCTGTGGCCCTGCATCCAGATACCTGCCTCGTC...CGTCTGCATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GCTGCGGGCCAAGTTGGGGCAGGACATACAGCCCATTCCATGGGGAGGATGAGGGGCCCACAACTCAAGTaGCCCTGGAGCAGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: AAGQVGAGHTAHSMGRMRGPQLK*PWSRGL
Trigger: CAGACCCCTGCTCCAGGGCCACTTGAGTTGTGGGCC...CCTCATCCTCCCCATGGAATGGGCTGTATGTCCTGCCCCAACTTGGCCCGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp CAGGCAGCGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCACACACATGAGACCTCCTACGAGTaGTACTGGGGCCTTCCCACG +
Preference number: 4 (lower is better)
Translates to: QAAGPSPAHTRPTSDHTHETSYE*YWGLPT
Trigger: CGTGGGAAGGCCCCAGTACCACTCGTAGGAGGTCTC...ATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCGCTGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GTCTGGCCTGCTGCGGGCCAAGTTGGGGCAGGACATACAGCCCATTCCATGGGGGAGACCTCCTACGAGTaGTACTGGGGCCTTCCCACG +
Preference number: 4 (lower is better)
Translates to: VWPAAGQVGAGHTAHSMGETSYE*YWGLPT
Trigger: CGTGGGAAGGCCCCAGTACCACTCGTAGGAGGTCTC...CCCCATGGAATGGGCTGTATGTCCTGCCCCAACTTGGCCCGCAGCAGGCCAGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp TGGGGGTCAGTGAGGCACGGCTCTGCCTCAAGGCCACCCCCTCCTAAGGACACAGAGACCTCCTACGAGTaGTACTGGGGCCTTCCCACG +
Preference number: 4 (lower is better)
Translates to: WGSVRHGSASRPPPPKDTETSYE*YWGLPT
Trigger: CGTGGGAAGGCCCCAGTACCACTCGTAGGAGGTCTC...TGTGTCCTTAGGAGGGGGTGGCCTTGAGGCAGAGCCGTGCCTCACTGACCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
ENST00000551787.5
CDS-3UTR CCA 90 bp GCGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCACACACATGCAGACTGCTGCGGGCCAAGTTaGGGCAGGACATACAGCCCA +
Preference number: 4 (lower is better)
Translates to: AGPSPAHTRPTSDHTHADCCGPS*GRTYSP
Trigger: TGGGCTGTATGTCCTGCCCCAACTTGGCCCGCAGCA...GTCTGCATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp AGGATGAGGCCCCTGGGGGTCAGTGAGGCACGGCTCTGCCTCAAGGCCACCCCCACTGCATTCCCCAAATaGACCCACCACAACCTGCTG +
Preference number: 4 (lower is better)
Translates to: RMRPLGVSEARLCLKATPTAFPK*THHNLL
Trigger: CAGCAGGTTGTGGTGGGTCCATTTGGGGAATGCAGT...GGGGGTGGCCTTGAGGCAGAGCCGTGCCTCACTGACCCCCAGGGGCCTCATCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000379932.8
CDS-3UTR CCA 90 bp GGACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGTCGCGGGTACCTGGTTaGCGCTGTCTCTCATTTAGA +
Preference number: 4 (lower is better)
Translates to: GRGLWDRCHLSPGVSALGSRVPG*RCLSFR
Trigger: TCTAAATGAGAGACAGCGCCAACCAGGTACCCGCGA...CCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440513.7
CDS-3UTR CCA 90 bp AGCCCGTCTGATGCTGAGGAGACCCGCGAGGCCCCCTGCCAGGACATCACCTGCACAGGGAAGTGGGGCTaGCTTTTAGCCTTCGCACAC +
Preference number: 4 (lower is better)
Translates to: SPSDAEETREAPCQDITCTGKWG*LLAFAH
Trigger: GTGTGCGAAGGCTAAAAGCCAGCCCCACTTCCCTGT...GCAGGTGATGTCCTGGCAGGGGGCCTCGCGGGTCTCCTCAGCATCAGACGGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000440513.7
CDS-3UTR CCA 90 bp GGACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGTCATTCAGGATGTACTaGGCGAGCACAGGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: GRGLWDRCHLSPGVSALGSFRMY*ASTGKW
Trigger: CCACTTCCCTGTGCTCGCCCAGTACATCCTGAATGA...CCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440513.7
CDS-3UTR CCA 90 bp GGTGCCCTCCTGCCATGGAGACCCACACTCCCACAAGTCTCGGACTGTGACCCCGGTGCCCTCCTGCCATaGAGACCCACACTCCCACAA +
Preference number: 4 (lower is better)
Translates to: GALLPWRPTLPQVSDCDPGALLP*RPTLPQ
Trigger: TTGTGGGAGTGTGGGTCTCCATGGCAGGAGGGCACC...GGGGTCACAGTCCGAGACTTGTGGGAGTGTGGGTCTCCATGGCAGGAGGGCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548421.2
CDS-3UTR TCA 90 bp AGGACACAGGGTGAAGCCCCCTCGGCCACATCCGGGGCAGCCATGCCAGAGCTGCCTTCACAGTCCTCCTaGAGTCATGCATTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: RTQGEAPSATSGAAMPELPSQSS*SHAFWL
Trigger: CAGCCAGAATGCATGACTTCAGGAGGACTGTGAAGG...CAGCTCTGGCATGGCTGCCCCGGATGTGGCCGAGGGGGCTTCACCCTGTGTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
ENST00000551787.5
CDS-3UTR TCA 90 bp GACGGCAGGCAGCGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCACACCTTCACAGTCCTCCTaGAGTCATGCATTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: DGRQRDPALHTPGPHLITPSQSS*SHAFWL
Trigger: CAGCCAGAATGCATGACTTCAGGAGGACTGTGAAGG...TGTGATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCGCTGCCTGCCGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR TCA 90 bp TGCTGCTCAGGAGGGGACGGTGCGGAGGGTGGGCTGGAGACTCCAGAGCTGGTCCCTTCACAGTCCTCCTaGAGTCATGCATTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: CCSGGDGAEGGLETPELVPSQSS*SHAFWL
Trigger: CAGCCAGAATGCATGACTTCAGGAGGACTGTGAAGG...GACCAGCTCTGGAGTCTCCAGCCCACCCTCCGCACCGTCCCCTCCTGAGCAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR TCA 90 bp GTCGACGGCAGGCAGCGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCTCATCAATGGTCAACTaGCTGGTGGGGGTGTCTTCA +
Preference number: 4 (lower is better)
Translates to: VDGRQRDPALHTPGPHLISSMVN*LVGVSS
Trigger: TGAAGACACCCCCACCAGTCAGTTGACCATTGATGA...GATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCGCTGCCTGCCGTCGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR TCA 90 bp GGGAGGATGAGGCCCCTGGGGGTCAGTGAGGCACGGCTCTGCCTCAAGGCCACCTCATCAATGGTCAACTaGCTGGTGGGGGTGTCTTCA +
Preference number: 4 (lower is better)
Translates to: GRMRPLGVSEARLCLKATSSMVN*LVGVSS
Trigger: TGAAGACACCCCCACCAGTCAGTTGACCATTGATGA...GGTGGCCTTGAGGCAGAGCCGTGCCTCACTGACCCCCAGGGGCCTCATCCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000379932.8
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
ENST00000551787.5
CDS-3UTR TCA 90 bp GCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCTGCCTGTCATCAATGGTCAACTaGCTGGTGGGGGTGTCTTCA +
Preference number: 4 (lower is better)
Translates to: AVGQVPPVTRSLGAGACLSSMVN*LVGVSS
Trigger: TGAAGACACCCCCACCAGTCAGTTGACCATTGATGA...CAGGCAGGCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR TCA 90 bp AGGCAGCGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCACACACATGGGTCATCAATGCCACTaGGGTCCAGCTCACCGTCTC +
Preference number: 4 (lower is better)
Translates to: RQRDPALHTPGPHLITHMGHQCH*GPAHRL
Trigger: GAGACGGTGAGCTGGACCTCAGTGGCATTGATGACC...CATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCGCTGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR TCA 90 bp CTGCACACACCCGGCCCACATCTGATCACACACATGCAGACGCTTGGTCCGGTTCGGCGTCCTCCTTCGTaGCAGCTTCCTGGCACTGGC +
Preference number: 4 (lower is better)
Translates to: LHTPGPHLITHMQTLGPVRRPPS*QLPGTG
Trigger: GCCAGTGCCAGGAAGCTGTCACGAAGGAGGACGCCG...AACCGGACCAAGCGTCTGCATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR TCA 90 bp TGGGGGTGTCTGCCTCGGACGAGGCAGGTATCTGGATGCAGGGCCACAGCTGGATGGGGTCCCACACTATaGAATCGCAGCTGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: WGCLPRTRQVSGCRATAGWGPTL*NRSCGL
Trigger: GAGGCCACAGCTGCGATTTCATAGTGTGGGACCCCA...TCCAGCTGTGGCCCTGCATCCAGATACCTGCCTCGTCCGAGGCAGACACCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392557.8
CDS-3UTR TCA 90 bp TGGGGGTCAGTGAGGCACGGCTCTGCCTCAAGGCCACCCCCTCCTAAGGACACACAGCCATGCCAGAGCTaGGACCTCCTACGAGTGGTA +
Preference number: 4 (lower is better)
Translates to: WGSVRHGSASRPPPPKDTQPCQS*DLLRVV
Trigger: TACCACTCGTAGGAGGTCTCAGCTCTGGCATGGCTG...TGTGTCCTTAGGAGGGGGTGGCCTTGAGGCAGAGCCGTGCCTCACTGACCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
ENST00000551787.5
CDS-3UTR TCA 90 bp CTGCCATGGAGACCCACACTCCCACAAGTCTCGGACTGTGACCCCCATGTCATGGTTGTCCTCCAGCACTaGGCCGCAGGCGGTGCACAC +
Preference number: 4 (lower is better)
Translates to: LPWRPTLPQVSDCDPHVMVVLQH*AAGGAH
Trigger: GTGTGCACCGCCTGCGGCTCAGTGCTGGAGGACAAC...CATGACATGGGGGTCACAGTCCGAGACTTGTGGGAGTGTGGGTCTCCATGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548421.2
CDS-3UTR GCA 90 bp CTGCACACACCCGGCCCACATCTGATCACACACATGCAGACGCTTGGTCCGGTTCGCCGCAACCGCACCTaGACACCTGCCTCAATGCGG +
Preference number: 4 (lower is better)
Translates to: LHTPGPHLITHMQTLGPVRRNRT*TPASMR
Trigger: CCGCATTGAGGCAGGTGTGCAGGTGCGGTTGCGGCG...AACCGGACCAAGCGTCTGCATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327359.7
CDS-3UTR GCA 90 bp GCCCTCCTGCCATGGAGACCCACACTCCCACAAGTCTCGGACTGTGACCCCCATCAGTGCTGGTTCAGCTaGAGCTGGTTCCCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: ALLPWRPTLPQVSDCDPHQCWFS*SWFPRW
Trigger: CCACCTGGGGAACCAGCTGCAGCTGAACCAGCACTG...ATGGGGGTCACAGTCCGAGACTTGTGGGAGTGTGGGTCTCCATGGCAGGAGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548421.2
CDS-3UTR GCA 90 bp CGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCACACACATGCAGACGGTCATGCATTCTGGCTaGAACCAGGAGCGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: RDPALHTPGPHLITHMQTVMHSG*NQERCS
Trigger: GGAGCAGCGCTCCTGGTTGCAGCCAGAATGCATGAC...CGTCTGCATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000547530.7
CDS-3UTR GCA 90 bp AGGACACAGGGTGAAGCCCCCTCGGCCACATCCGGGGCAGCCATGCCAGAGCTGGTCCTCCTGAAGTCATaGATTCTGGCTGCAACCAGG +
Preference number: 4 (lower is better)
Translates to: RTQGEAPSATSGAAMPELVLLKS*ILAATR
Trigger: CCTGGTTGCAGCCAGAATGCATGACTTCAGGAGGAC...CAGCTCTGGCATGGCTGCCCCGGATGTGGCCGAGGGGGCTTCACCCTGTGTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
ENST00000551787.5
CDS-3UTR GCA 90 bp TGGGACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGTGCTCTGAGAGGAGATaGATTCGCGGATGGAGTCTG +
Preference number: 4 (lower is better)
Translates to: WDEGCGTGATCHQESRRWCSERR*IRGWSL
Trigger: CAGACTCCATCCGCGAATGCATCTCCTCTCAGAGCA...CCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp CTGTCGGGCACTCAGTTCACCTGCCGGCAGCCGCAGGGCTCCTGGGCCCACAACCATCTTTGGGGTCGCTaGTCTGAGAGGAGATGCATT +
Preference number: 4 (lower is better)
Translates to: LSGTQFTCRQPQGSWAHNHLWGR*SERRCI
Trigger: AATGCATCTCCTCTCAGAGCAGCGACCCCAAAGATG...GTTGTGGGCCCAGGAGCCCTGCGGCTGCCGGCAGGTGAACTGAGTGCCCGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp GGACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCATCTTTGGGGTCGCTaGTCTGAGAGGAGATGCATT +
Preference number: 4 (lower is better)
Translates to: GRGLWDRCHLSPGVSALGHLWGR*SERRCI
Trigger: AATGCATCTCCTCTCAGAGCAGCGACCCCAAAGATG...CCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp CTCAGGACGGGTGGGCGCCGGTCTCAGCTGTCGGGCACTCAGTTCACCTGCCGGCATCTTTGGGGTCGCTaGTCTGAGAGGAGATGCATT +
Preference number: 4 (lower is better)
Translates to: LRTGGRRSQLSGTQFTCRHLWGR*SERRCI
Trigger: AATGCATCTCCTCTCAGAGCAGCGACCCCAAAGATG...CCGGCAGGTGAACTGAGTGCCCGACAGCTGAGACCGGCGCCCACCCGTCCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp TCGGGCACTCAGTTCACCTGCCGGCAGCCGCAGGGCTCCTGGGCCCACAACTCATTGGCTCCCGTCGCTTaGAAGACTTCTTGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: SGTQFTCRQPQGSWAHNSLAPVA*KTSWAC
Trigger: ACAAGCCCAAGAAGTCTTGCAAGCGACGGGAGCCAA...TGAGTTGTGGGCCCAGGAGCCCTGCGGCTGCCGGCAGGTGAACTGAGTGCCCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp GACGGCAGGCAGCGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCACATTGGCTCCCGTCGCTTaGAAGACTTCTTGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: DGRQRDPALHTPGPHLITLAPVA*KTSWAC
Trigger: ACAAGCCCAAGAAGTCTTGCAAGCGACGGGAGCCAA...TGTGATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCGCTGCCTGCCGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp CTGCACACACCCGGCCCACATCTGATCACACACATGCAGACGCTTGGTCCGGTTGGTCAGCCCCACTTCTaGTGGCCGGCGTCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: LHTPGPHLITHMQTLGPVGQPHF*WPASSF
Trigger: GAAGGAGGACGCCGGCCAGCAGAAGTGGGGCTGACC...AACCGGACCAAGCGTCTGCATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp ATGGGACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGACCTTCTTTGCTGGCTaGGTAGACACCAGAGGCCTC +
Preference number: 4 (lower is better)
Translates to: MGRGLWDRCHLSPGVSALTFFAG*VDTRGL
Trigger: GAGGCCTCTGGTGTCTACGCAGCCAGCAAAGAAGGT...CAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTCCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp CGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCACACACATGCAGACGCGTGGCCACCTTCTTTaGTGGCTGCGTAGACACCAG +
Preference number: 4 (lower is better)
Translates to: RDPALHTPGPHLITHMQTRGHLL*WLRRHQ
Trigger: CTGGTGTCTACGCAGCCAGCAAAGAAGGTGGCCACG...CGTCTGCATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp ACGGCTCTGCCTCAAGGCCACCCCCTCCTAAGGACACAGGGTGAAGCCCCCTCGCACAGCCATAGTCGTTaGTGCCCATCATCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: TALPQGHPLLRTQGEAPSHSHSR*CPSSAG
Trigger: CCCTGCAGATGATGGGCAGCAACGACTATGGCTGTG...CGAGGGGGCTTCACCCTGTGTCCTTAGGAGGGGGTGGCCTTGAGGCAGAGCCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp CTCCTAAGGACACAGGGTGAAGCCCCCTCGGCCACATCCGGGGCAGCCATGCCACACAGCCATAGTCGTTaGTGCCCATCATCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: LLRTQGEAPSATSGAAMPHSHSR*CPSSAG
Trigger: CCCTGCAGATGATGGGCAGCAACGACTATGGCTGTG...TGGCATGGCTGCCCCGGATGTGGCCGAGGGGGCTTCACCCTGTGTCCTTAGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp GGTGGGGGTGTCTGCCTCGGACGAGGCAGGTATCTGGATGCAGGGCCACAGCTGCCTTCAAGGAGCTGCTaGCTCTCAAGTGCCAGATCC +
Preference number: 4 (lower is better)
Translates to: GGGVCLGRGRYLDAGPQLPSRSC*LSSARS
Trigger: GGATCTGGCACTTGAGAGGCAGCAGCTCCTTGAAGG...CAGCTGTGGCCCTGCATCCAGATACCTGCCTCGTCCGAGGCAGACACCCCCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp GCTGCGGGCCAAGTTGGGGCAGGACATACAGCCCATTCCATGGGGAGGATGAGGAGGCAGGTATCTGGATaGAGGGCCACAGCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: AAGQVGAGHTAHSMGRMRRQVSG*RATAGG
Trigger: GCCTCCAGCTGTGGCCCTGCATCCAGATACCTGCCT...CCTCATCCTCCCCATGGAATGGGCTGTATGTCCTGCCCCAACTTGGCCCGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp ACGGCTCTGCCTCAAGGCCACCCCCTCCTAAGGACACAGGGTGAAGCCCCCTCGAGGCTATGCCCGCACTaGCTACAGAGCTATGCTCAG +
Preference number: 4 (lower is better)
Translates to: TALPQGHPLLRTQGEAPSRLCPH*LQSYAQ
Trigger: CTGAGCATAGCTCTGTAGGCAGTGCGGGCATAGCCT...CGAGGGGGCTTCACCCTGTGTCCTTAGGAGGGGGTGGCCTTGAGGCAGAGCCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp ACTGCCTACAGAGCTATGCTCAGGACGGGTGGGCGCCGGTCTCAGCTGTCGGGCACACTATGCAGGCTATaGCCGCACTGCCTACAGAGC +
Preference number: 4 (lower is better)
Translates to: TAYRAMLRTGGRRSQLSGTLCRL*PHCLQS
Trigger: GCTCTGTAGGCAGTGCGGGCATAGCCTGCATAGTGT...GCCCGACAGCTGAGACCGGCGCCCACCCGTCCTGAGCATAGCTCTGTAGGCAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp CTGCACACACCCGGCCCACATCTGATCACACACATGCAGACGCTTGGTCCGGTTGACAGGGAGCGCCACTaGCCTCTGGCTCTGTCCACG +
Preference number: 4 (lower is better)
Translates to: LHTPGPHLITHMQTLGPVDRERH*PLALST
Trigger: CGTGGACAGAGCCAGAGGGCAGTGGCGCTCCCTGTC...AACCGGACCAAGCGTCTGCATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp GGGTGGGGGTGTCTGCCTCGGACGAGGCAGGTATCTGGATGCAGGGCCACAGCTCTGCTCTCCACGAACTaGACCTCGGACACGATGATG +
Preference number: 4 (lower is better)
Translates to: GWGCLPRTRQVSGCRATALLSTN*TSDTMM
Trigger: CATCATCGTGTCCGAGGTGCAGTTCGTGGAGAGCAG...AGCTGTGGCCCTGCATCCAGATACCTGCCTCGTCCGAGGCAGACACCCCCACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379937.6
ENST00000547530.7
CDS-3UTR GCA 90 bp CTGCCATGGAGACCCACACTCCCACAAGTCTCGGACTGTGACCCCCATGTCATGAGGAGCCGCCGCCGCTaGTCTCCACGAACTGCACCT +
Preference number: 4 (lower is better)
Translates to: LPWRPTLPQVSDCDPHVMRSRRR*SPRTAP
Trigger: AGGTGCAGTTCGTGGAGAGCAGCGGCGGCGGCTCCT...CATGACATGGGGGTCACAGTCCGAGACTTGTGGGAGTGTGGGTCTCCATGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548421.2
CDS-3UTR GCA 90 bp GGTGGGGGTGTCTGCCTCGGACGAGGCAGGTATCTGGATGCAGGGCCACAGCTGCAACCAGGAGCGCTTTaGAGGAACGCGCTCATGTTC +
Preference number: 4 (lower is better)
Translates to: GGGVCLGRGRYLDAGPQLQPGAL*RNALMF
Trigger: GAACATGAGCGCGTTCCTGCAAAGCGCTCCTGGTTG...CAGCTGTGGCCCTGCATCCAGATACCTGCCTCGTCCGAGGCAGACACCCCCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000446501.6
CDS-3UTR GCA 90 bp TGCTGCTCAGGAGGGGACGGTGCGGAGGGTGGGCTGGAGACTCCAGAGCTGGTCGTCATGCATTCTGGCTaGAACCAGGAGCGCTTTGCA +
Preference number: 4 (lower is better)
Translates to: CCSGGDGAEGGLETPELVVMHSG*NQERFA
Trigger: TGCAAAGCGCTCCTGGTTGCAGCCAGAATGCATGAC...GACCAGCTCTGGAGTCTCCAGCCCACCCTCCGCACCGTCCCCTCCTGAGCAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446501.6
CDS-3UTR GCA 90 bp TTGGCAGGTGCCCTCCTGCCATGGAGACCCACACTCCCACAAGTCTCGGACTGTGACCGGCCACTGAGATaGGTGGAGGCACCTGGGGTA +
Preference number: 4 (lower is better)
Translates to: LAGALLPWRPTLPQVSDCDRPLR*VEAPGV
Trigger: TACCCCAGGTGCCTCCACGCATCTCAGTGGCCGGTC...ACAGTCCGAGACTTGTGGGAGTGTGGGTCTCCATGGCAGGAGGGCACCTGCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548421.2
CDS-3UTR CCA 90 bp GTTCACCCAGGCCTAGCTAACACCCAACCGTGCCCAGCATTGGCAGGTGCCCTCTGGTTCCCCAGGTGGTaGATGTGGCGCCTCCCATTC +
Preference number: 4 (lower is better)
Translates to: VHPGLANTQPCPALAGALWFPRW*MWRLPF
Trigger: GAATGGGAGGCGCCACATCCACCACCTGGGGAACCA...GAGGGCACCTGCCAATGCTGGGCACGGTTGGGTGTTAGCTAGGCCTGGGTGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548421.2
CDS-3UTR CCA 90 bp GCGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCACACACATGCAGACGTGTCCAGGCAGTGCTaGTTCAGCTGCAGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: AGPSPAHTRPTSDHTHADVSRQC*FSCSWF
Trigger: GAACCAGCTGCAGCTGAACCAGCACTGCCTGGACAC...GTCTGCATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000547530.7
CDS-3UTR CCA 90 bp ATGGGACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGCCTCAGGGCAGTCATaGACACCTCGTGGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: MGRGLWDRCHLSPGVSALASGQS*TPRGSS
Trigger: AGAAGAACCACGAGGTGTCCATGACTGCCCTGAGGC...CAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTCCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000547530.7
CDS-3UTR CCA 90 bp GACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCTGGTCAACTGACTGGTaGGGGTGTCTTCAAATTCCG +
Preference number: 4 (lower is better)
Translates to: DEGCGTGATCHQESRRWGWSTDW*GCLQIP
Trigger: CGGAATTTGAAGACACCCCCACCAGTCAGTTGACCA...GCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GGGAGGATGAGGCCCCTGGGGGTCAGTGAGGCACGGCTCTGCCTCAAGGCCACCTGGTCAACTGACTGGTaGGGGTGTCTTCAAATTCCG +
Preference number: 4 (lower is better)
Translates to: GRMRPLGVSEARLCLKATWSTDW*GCLQIP
Trigger: CGGAATTTGAAGACACCCCCACCAGTCAGTTGACCA...GGTGGCCTTGAGGCAGAGCCGTGCCTCACTGACCCCCAGGGGCCTCATCCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000379932.8
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
ENST00000551787.5
CDS-3UTR CCA 90 bp GCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCTGCCTGTGGTCAACTGACTGGTaGGGGTGTCTTCAAATTCCG +
Preference number: 4 (lower is better)
Translates to: AVGQVPPVTRSLGAGACLWSTDW*GCLQIP
Trigger: CGGAATTTGAAGACACCCCCACCAGTCAGTTGACCA...CAGGCAGGCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp CTCAGGACGGGTGGGCGCCGGTCTCAGCTGTCGGGCACTCAGTTCACCTGCCGGTGGTCAACTGACTGGTaGGGGTGTCTTCAAATTCCG +
Preference number: 4 (lower is better)
Translates to: LRTGGRRSQLSGTQFTCRWSTDW*GCLQIP
Trigger: CGGAATTTGAAGACACCCCCACCAGTCAGTTGACCA...CCGGCAGGTGAACTGAGTGCCCGACAGCTGAGACCGGCGCCCACCCGTCCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp AGGATGAGGCCCCTGGGGGTCAGTGAGGCACGGCTCTGCCTCAAGGCCACCCCCTGGTCAACTGACTGGTaGGGGTGTCTTCAAATTCCG +
Preference number: 4 (lower is better)
Translates to: RMRPLGVSEARLCLKATPWSTDW*GCLQIP
Trigger: CGGAATTTGAAGACACCCCCACCAGTCAGTTGACCA...GGGGGTGGCCTTGAGGCAGAGCCGTGCCTCACTGACCCCCAGGGGCCTCATCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000379932.8
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
ENST00000551787.5
CDS-3UTR CCA 90 bp GCTGCGGGCCAAGTTGGGGCAGGACATACAGCCCATTCCATGGGGAGGATGAGGACGCGGTGTCCTCGGTaGAGCCATCTTTTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: AAGQVGAGHTAHSMGRMRTRCPR*SHLLPG
Trigger: GCCTGGCAAAAGATGGCTCCACCGAGGACACCGCGT...CCTCATCCTCCCCATGGAATGGGCTGTATGTCCTGCCCCAACTTGGCCCGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp ACGGCTCTGCCTCAAGGCCACCCCCTCCTAAGGACACAGGGTGAAGCCCCCTCGCTCCTGAAGCATCTTTaGGGTCGCTGCTCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: TALPQGHPLLRTQGEAPSLLKHL*GRCSER
Trigger: CCTCTCAGAGCAGCGACCCCAAAGATGCTTCAGGAG...CGAGGGGGCTTCACCCTGTGTCCTTAGGAGGGGGTGGCCTTGAGGCAGAGCCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GGGTCAGTGAGGCACGGCTCTGCCTCAAGGCCACCCCCTCCTAAGGACACAGGGGGTACTGGCCTGAATTaGCTCCCGTCGCTTGCAAGA +
Preference number: 4 (lower is better)
Translates to: GSVRHGSASRPPPPKDTGGTGLN*LPSLAR
Trigger: TCTTGCAAGCGACGGGAGCCAATTCAGGCCAGTACC...CCCTGTGTCCTTAGGAGGGGGTGGCCTTGAGGCAGAGCCGTGCCTCACTGACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp CAGGCAGCGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCACACACATTTCGTGACAGCTTCCTaGCACTGGCGCTATGCTCGG +
Preference number: 4 (lower is better)
Translates to: QAAGPSPAHTRPTSDHTHFVTAS*HWRYAR
Trigger: CCGAGCATAGCGCCAGTGCCAGGAAGCTGTCACGAA...ATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCGCTGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp AGGCAGCGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCACACACATGTTCGTGACAGCTTCCTaGCACTGGCGCTATGCTCGG +
Preference number: 4 (lower is better)
Translates to: RQRDPALHTPGPHLITHMFVTAS*HWRYAR
Trigger: CCGAGCATAGCGCCAGTGCCAGGAAGCTGTCACGAA...CATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCGCTGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GCGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCACACACATGCAGACGCAAAGCCTCTCCCGTaGCCACCTTCTTTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: AGPSPAHTRPTSDHTHADAKPLP*PPSLLA
Trigger: AGCCAGCAAAGAAGGTGGCCACGGGAGAGGCTTTGC...GTCTGCATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp AACACCACACTGCCAGCCTTGGAGGGTCCTTGGATGAGTCGACGGCAGGCAGCGGCTCAGCTCCGAGGGTaGGAGAGCTTGGGAGCAAAG +
Preference number: 4 (lower is better)
Translates to: NTTLPALEGPWMSRRQAAAQLRG*ESLGAK
Trigger: CTTTGCTCCCAAGCTCTCCCACCCTCGGAGCTGAGC...CGCTGCCTGCCGTCGACTCATCCAAGGACCCTCCAAGGCTGGCAGTGTGGTGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp CTCCTAAGGACACAGGGTGAAGCCCCCTCGGCCACATCCGGGGCAGCCATGCCAATGAAATCGCAGCTGTaGCCTCGGTGGGTGTGTCCT +
Preference number: 4 (lower is better)
Translates to: LLRTQGEAPSATSGAAMPMKSQL*PRWVCP
Trigger: AGGACACACCCACCGAGGCCACAGCTGCGATTTCAT...TGGCATGGCTGCCCCGGATGTGGCCGAGGGGGCTTCACCCTGTGTCCTTAGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392557.8
ENST00000551787.5
CDS-3UTR CCA 90 bp ACATGGGACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCATGGAAACAGACGGCTaGGACAGAAACCACGGCCAC +
Preference number: 4 (lower is better)
Translates to: TWDEGCGTGATCHQESRRMETDG*DRNHGH
Trigger: GTGGCCGTGGTTTCTGTCCCAGCCGTCTGTTTCCAT...GCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTCCCATGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392557.8
CDS-3UTR CCA 90 bp GGGTCAGTGAGGCACGGCTCTGCCTCAAGGCCACCCCCTCCTAAGGACACAGGGATGGAAACAGACGGCTaGGACAGAAACCACGGCCAC +
Preference number: 4 (lower is better)
Translates to: GSVRHGSASRPPPPKDTGMETDG*DRNHGH
Trigger: GTGGCCGTGGTTTCTGTCCCAGCCGTCTGTTTCCAT...CCCTGTGTCCTTAGGAGGGGGTGGCCTTGAGGCAGAGCCGTGCCTCACTGACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392557.8
ENST00000551787.5
CDS-3UTR CCA 90 bp GCGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCACACACATGCAGACATGCAGGGCCACAGCTaGAGGCAGAGGACCTTCAAG +
Preference number: 4 (lower is better)
Translates to: AGPSPAHTRPTSDHTHADMQGHS*RQRTFK
Trigger: CTTGAAGGTCCTCTGCCTCCAGCTGTGGCCCTGCAT...GTCTGCATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp TGGGGGTCAGTGAGGCACGGCTCTGCCTCAAGGCCACCCCCTCCTAAGGACACATCCTACGAGTGGTACTaGGGCCTTCCCACGAAGAGG +
Preference number: 4 (lower is better)
Translates to: WGSVRHGSASRPPPPKDTSYEWY*GLPTKR
Trigger: CCTCTTCGTGGGAAGGCCCCAGTACCACTCGTAGGA...TGTGTCCTTAGGAGGGGGTGGCCTTGAGGCAGAGCCGTGCCTCACTGACCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
ENST00000551787.5
CDS-3UTR CCA 90 bp TTGGCAGGTGCCCTCCTGCCATGGAGACCCACACTCCCACAAGTCTCGGACTGTCCCCGGTCACAACCCTaGTCACAACCCCCAGGTCAC +
Preference number: 4 (lower is better)
Translates to: LAGALLPWRPTLPQVSDCPRSQP*SQPPGH
Trigger: GTGACCTGGGGGTTGTGACCAGGGTTGTGACCGGGG...ACAGTCCGAGACTTGTGGGAGTGTGGGTCTCCATGGCAGGAGGGCACCTGCCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548421.2
CDS-3UTR TCA 90 bp ACATGGGACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCCCTTCACAGTCCTCCTaGAGTCATGCATTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: TWDEGCGTGATCHQESRRPSQSS*SHAFWL
Trigger: CAGCCAGAATGCATGACTTCAGGAGGACTGTGAAGG...GCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTCCCATGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR TCA 90 bp GGGTCAGTGAGGCACGGCTCTGCCTCAAGGCCACCCCCTCCTAAGGACACAGGGCCTTCACAGTCCTCCTaGAGTCATGCATTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: GSVRHGSASRPPPPKDTGPSQSS*SHAFWL
Trigger: CAGCCAGAATGCATGACTTCAGGAGGACTGTGAAGG...CCCTGTGTCCTTAGGAGGGGGTGGCCTTGAGGCAGAGCCGTGCCTCACTGACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
ENST00000551787.5
CDS-3UTR TCA 90 bp AGCCCGTCTGATGCTGAGGAGACCCGCGAGGCCCCCTGCCAGGACATCACCTGCTCATCAATGGTCAACTaGCTGGTGGGGGTGTCTTCA +
Preference number: 4 (lower is better)
Translates to: SPSDAEETREAPCQDITCSSMVN*LVGVSS
Trigger: TGAAGACACCCCCACCAGTCAGTTGACCATTGATGA...GCAGGTGATGTCCTGGCAGGGGGCCTCGCGGGTCTCCTCAGCATCAGACGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR TCA 90 bp AGGACACAGGGTGAAGCCCCCTCGGCCACATCCGGGGCAGCCATGCCAGAGCTGTCATCAATGGTCAACTaGCTGGTGGGGGTGTCTTCA +
Preference number: 4 (lower is better)
Translates to: RTQGEAPSATSGAAMPELSSMVN*LVGVSS
Trigger: TGAAGACACCCCCACCAGTCAGTTGACCATTGATGA...CAGCTCTGGCATGGCTGCCCCGGATGTGGCCGAGGGGGCTTCACCCTGTGTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
ENST00000551787.5
CDS-3UTR TCA 90 bp GCCCTGCACACACCCGGCCCACATCTGATCACACACATGCAGACGCTTGGTCCGCAGCTCACCGTCTCCTaGAGCATCTTTGGGGTCGCT +
Preference number: 4 (lower is better)
Translates to: ALHTPGPHLITHMQTLGPQLTVS*SIFGVA
Trigger: AGCGACCCCAAAGATGCTTCAGGAGACGGTGAGCTG...CGGACCAAGCGTCTGCATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR TCA 90 bp GCCCTGCACACACCCGGCCCACATCTGATCACACACATGCAGACGCTTGGTCCGGGTCATCAATGCCACTaGGGTCCAGCTCACCGTCTC +
Preference number: 4 (lower is better)
Translates to: ALHTPGPHLITHMQTLGPGHQCH*GPAHRL
Trigger: GAGACGGTGAGCTGGACCTCAGTGGCATTGATGACC...CGGACCAAGCGTCTGCATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR TCA 90 bp CTGCACACACCCGGCCCACATCTGATCACACACATGCAGACGCTTGGTCCGGTTCTGGCGGTACTGGCCTaGATTGGCTCCCGTCGCTTG +
Preference number: 4 (lower is better)
Translates to: LHTPGPHLITHMQTLGPVLAVLA*IGSRRL
Trigger: CAAGCGACGGGAGCCAATTCAGGCCAGTACCGCCAG...AACCGGACCAAGCGTCTGCATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR TCA 90 bp GGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCTGCCGGAGCACGCTATAATTaGTCTTGCTGGAGATCTTCT +
Preference number: 4 (lower is better)
Translates to: GLWDRCHLSPGVSALGPAGARYN*SCWRSS
Trigger: AGAAGATCTCCAGCAAGATCAATTATAGCGTGCTCC...GGCAGGCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR TCA 90 bp TGGGACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGTCCACCAACACTACGTaGCAAGTCTCAAGTTCAGCC +
Preference number: 4 (lower is better)
Translates to: WDEGCGTGATCHQESRRWSTNTT*QVSSSA
Trigger: GGCTGAACTTGAGACTTGTCACGTAGTGTTGGTGGA...CCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392557.8
CDS-3UTR TCA 90 bp GGGAGGATGAGGCCCCTGGGGGTCAGTGAGGCACGGCTCTGCCTCAAGGCCACCGATCCTTTCTGTTGCTaGTGGACATGTAGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: GRMRPLGVSEARLCLKATDPFCC*WTCRLS
Trigger: AGACAGCCTACATGTCCATCAGCAACAGAAAGGATC...GGTGGCCTTGAGGCAGAGCCGTGCCTCACTGACCCCCAGGGGCCTCATCCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379932.8
CDS-3UTR TCA 90 bp GCAGGTGCCCTCCTGCCATGGAGACCCACACTCCCACAAGTCTCGGACTGTGACGTGACCCCCATGTCATaGAGGCCCCTCATCCTACAG +
Preference number: 4 (lower is better)
Translates to: AGALLPWRPTLPQVSDCDVTPMS*RPLILQ
Trigger: CTGTAGGATGAGGGGCCTTCATGACATGGGGGTCAC...GTCACAGTCCGAGACTTGTGGGAGTGTGGGTCTCCATGGCAGGAGGGCACCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548421.2
CDS-3UTR GCA 90 bp GGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCTGCCGATGCAGAGCTCTCTTaGCAAGAGAAGAAACGTCTT +
Preference number: 4 (lower is better)
Translates to: GLWDRCHLSPGVSALGPADAELS*QEKKRL
Trigger: AAGACGTTTCTTCTCTTGGCAAGAGAGCTCTGCATC...GGCAGGCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000440513.7
ENST00000547530.7
CDS-3UTR GCA 90 bp ACAGGGCCAGCACACTCAGCCCTCCACACACTTGGACCAGCAGTGGGGCTGCCCTGCTCTGAGAGGAGATaGATTCGCGGATGGAGTCTG +
Preference number: 4 (lower is better)
Translates to: TGPAHSALHTLGPAVGLPCSERR*IRGWSL
Trigger: CAGACTCCATCCGCGAATGCATCTCCTCTCAGAGCA...GGGCAGCCCCACTGCTGGTCCAAGTGTGTGGAGGGCTGAGTGTGCTGGCCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp GACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCTGTGTTCCTTGTAGATaGCGAGCTCCTTCTCTTTCG +
Preference number: 4 (lower is better)
Translates to: DEGCGTGATCHQESRRWGCVPCR*RAPSLS
Trigger: CGAAAGAGAAGGAGCTCGGCATCTACAAGGAACACA...GCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp GCCCGTCTGATGCTGAGGAGACCCGCGAGGCCCCCTGCCAGGACATCACCTGCCTGTGTTCCTTGTAGATaGCGAGCTCCTTCTCTTTCG +
Preference number: 4 (lower is better)
Translates to: ARLMLRRPARPPARTSPACVPCR*RAPSLS
Trigger: CGAAAGAGAAGGAGCTCGGCATCTACAAGGAACACA...GGCAGGTGATGTCCTGGCAGGGGGCCTCGCGGGTCTCCTCAGCATCAGACGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp GCCAGCCTTGGAGGGTCCTTGGATGAGTCGACGGCAGGCAGCGGGACCCAGCCCTGTGTTCCTTGTAGATaGCGAGCTCCTTCTCTTTCG +
Preference number: 4 (lower is better)
Translates to: ASLGGSLDESTAGSGTQPCVPCR*RAPSLS
Trigger: CGAAAGAGAAGGAGCTCGGCATCTACAAGGAACACA...GGGCTGGGTCCCGCTGCCTGCCGTCGACTCATCCAAGGACCCTCCAAGGCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp ACATGGGACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTTGGCTCCCGTCGCTTaGAAGACTTCTTGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: TWDEGCGTGATCHQESRRLAPVA*KTSWAC
Trigger: ACAAGCCCAAGAAGTCTTGCAAGCGACGGGAGCCAA...GCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTCCCATGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp TGGGGGTGTCTGCCTCGGACGAGGCAGGTATCTGGATGCAGGGCCACAGCTGGAACCTTCTTTGCTGGCTaGGTAGACACCAGAGGCCTC +
Preference number: 4 (lower is better)
Translates to: WGCLPRTRQVSGCRATAGTFFAG*VDTRGL
Trigger: GAGGCCTCTGGTGTCTACGCAGCCAGCAAAGAAGGT...TCCAGCTGTGGCCCTGCATCCAGATACCTGCCTCGTCCGAGGCAGACACCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp CCTGCACACACCCGGCCCACATCTGATCACACACATGCAGACGCTTGGTCCGGTTTGCTGCCCATCATCTaGAGGGCACTGACGCAGGGC +
Preference number: 4 (lower is better)
Translates to: PAHTRPTSDHTHADAWSGLLPII*RALTQG
Trigger: GCCCTGCGTCAGTGCCCTGCAGATGATGGGCAGCAA...ACCGGACCAAGCGTCTGCATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp AGGCAGCGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCACACACATGCACAGCCATAGTCGTTaGTGCCCATCATCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: RQRDPALHTPGPHLITHMHSHSR*CPSSAG
Trigger: CCCTGCAGATGATGGGCAGCAACGACTATGGCTGTG...CATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCGCTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp CGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCACACACATGCAGACGGGACCTTCAAGGAGCTaGTGCCTCTCAAGTGCCAGA +
Preference number: 4 (lower is better)
Translates to: RDPALHTPGPHLITHMQTGPSRS*CLSSAR
Trigger: TCTGGCACTTGAGAGGCAGCAGCTCCTTGAAGGTCC...CGTCTGCATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp CCTGCACACACCCGGCCCACATCTGATCACACACATGCAGACGCTTGGTCCGGTAGCGCCAGGACACTATaGAGGCTATGCCCGCACTGC +
Preference number: 4 (lower is better)
Translates to: PAHTRPTSDHTHADAWSGSARTL*RLCPHC
Trigger: GCAGTGCGGGCATAGCCTGCATAGTGTCCTGGCGCT...ACCGGACCAAGCGTCTGCATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GTTCACCCAGGCCTAGCTAACACCCAACCGTGCCCAGCATTGGCAGGTGCCCTCTGGTTCAGCTGCAGCTaGTTCCCCAGGTGGTGGATG +
Preference number: 4 (lower is better)
Translates to: VHPGLANTQPCPALAGALWFSCS*FPRWWM
Trigger: CATCCACCACCTGGGGAACCAGCTGCAGCTGAACCA...GAGGGCACCTGCCAATGCTGGGCACGGTTGGGTGTTAGCTAGGCCTGGGTGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548421.2
CDS-3UTR CCA 90 bp GCCCTGCACACACCCGGCCCACATCTGATCACACACATGCAGACGCTTGGTCCGGTGTCCAGGCAGTGCTaGTTCAGCTGCAGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: ALHTPGPHLITHMQTLGPVSRQC*FSCSWF
Trigger: GAACCAGCTGCAGCTGAACCAGCACTGCCTGGACAC...CGGACCAAGCGTCTGCATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000547530.7
CDS-3UTR CCA 90 bp TGGGGGTCAGTGAGGCACGGCTCTGCCTCAAGGCCACCCCCTCCTAAGGACACACAGGTGCGCAAAGCGTaGAATATACAGGCACGGGTC +
Preference number: 4 (lower is better)
Translates to: WGSVRHGSASRPPPPKDTQVRKA*NIQARV
Trigger: GACCCGTGCCTGTATATTCCACGCTTTGCGCACCTG...TGTGTCCTTAGGAGGGGGTGGCCTTGAGGCAGAGCCGTGCCTCACTGACCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000547530.7
ENST00000551787.5
CDS-3UTR CCA 90 bp TGGGGGTCAGTGAGGCACGGCTCTGCCTCAAGGCCACCCCCTCCTAAGGACACAGCCTCAGGGCAGTCATaGACACCTCGTGGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: WGSVRHGSASRPPPPKDTASGQS*TPRGSS
Trigger: AGAAGAACCACGAGGTGTCCATGACTGCCCTGAGGC...TGTGTCCTTAGGAGGGGGTGGCCTTGAGGCAGAGCCGTGCCTCACTGACCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000547530.7
ENST00000551787.5
CDS-3UTR CCA 90 bp GGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCTGCCCAATGGTCAACTGACTaGTGGGGGTGTCTTCAAATT +
Preference number: 4 (lower is better)
Translates to: GLWDRCHLSPGVSALGPAQWSTD*WGCLQI
Trigger: AATTTGAAGACACCCCCACCAGTCAGTTGACCATTG...GGCAGGCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp CCTGCACACACCCGGCCCACATCTGATCACACACATGCAGACGCTTGGTCCGGTACGCGGTGTCCTCGGTaGAGCCATCTTTTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: PAHTRPTSDHTHADAWSGTRCPR*SHLLPG
Trigger: GCCTGGCAAAAGATGGCTCCACCGAGGACACCGCGT...ACCGGACCAAGCGTCTGCATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp CAGGCAGCGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCACACACATAGATGCATTCGCGGATaGAGTCTGAGATGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: QAAGPSPAHTRPTSDHTHRCIRG*SLRCPG
Trigger: GCCTGGGCATCTCAGACTCCATCCGCGAATGCATCT...ATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCGCTGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp CAGGCAGCGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCACACACATCTCCTGAAGCATCTTTaGGGTCGCTGCTCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: QAAGPSPAHTRPTSDHTHLLKHL*GRCSER
Trigger: CCTCTCAGAGCAGCGACCCCAAAGATGCTTCAGGAG...ATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCGCTGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCTGCCGCTTGCAAGACTTCTTaGGCTTGTGTTCCTTGTAGA +
Preference number: 4 (lower is better)
Translates to: GLWDRCHLSPGVSALGPAACKTS*ACVPCR
Trigger: TCTACAAGGAACACAAGCCCAAGAAGTCTTGCAAGC...GGCAGGCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp CCTGCACACACCCGGCCCACATCTGATCACACACATGCAGACGCTTGGTCCGGTCCAGCATCTTCTCGATaGCCTCCCTGGCGGTACTGG +
Preference number: 4 (lower is better)
Translates to: PAHTRPTSDHTHADAWSGPASSR*PPWRYW
Trigger: CCAGTACCGCCAGGGAGGCCATCGAGAAGATGCTGG...ACCGGACCAAGCGTCTGCATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp AACACCACACTGCCAGCCTTGGAGGGTCCTTGGATGAGTCGACGGCAGGCAGCGTTCGTGACAGCTTCCTaGCACTGGCGCTATGCTCGG +
Preference number: 4 (lower is better)
Translates to: NTTLPALEGPWMSRRQAAFVTAS*HWRYAR
Trigger: CCGAGCATAGCGCCAGTGCCAGGAAGCTGTCACGAA...CGCTGCCTGCCGTCGACTCATCCAAGGACCCTCCAAGGCTGGCAGTGTGGTGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GCCCTGCACACACCCGGCCCACATCTGATCACACACATGCAGACGCTTGGTCCGGCAAAGCCTCTCCCGTaGCCACCTTCTTTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: ALHTPGPHLITHMQTLGPAKPLP*PPSLLA
Trigger: AGCCAGCAAAGAAGGTGGCCACGGGAGAGGCTTTGC...CGGACCAAGCGTCTGCATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp CGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCACACACATGCAGACGAGGACATCACCTGCCTaGAGGCCACACTTCAGTAGC +
Preference number: 4 (lower is better)
Translates to: RDPALHTPGPHLITHMQTRTSPA*RPHFSS
Trigger: GCTACTGAAGTGTGGCCTCCAGGCAGGTGATGTCCT...CGTCTGCATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp ACATGGGACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCATGGTAAGTTCCACATaGGACGAGGGCTGTGGGACA +
Preference number: 4 (lower is better)
Translates to: TWDEGCGTGATCHQESRRMVSST*DEGCGT
Trigger: TGTCCCACAGCCCTCGTCCCATGTGGAACTTACCAT...GCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTCCCATGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GCTCTGCCTCAAGGCCACCCCCTCCTAAGGACACAGGGTGAAGCCCCCTCGGCCCTCTGGGCCATTGCATaGTGTCTGTTCACGTCCTTT +
Preference number: 4 (lower is better)
Translates to: ALPQGHPLLRTQGEAPSALWAIA*CLFTSF
Trigger: AAAGGACGTGAACAGACACCATGCAATGGCCCAGAG...GGCCGAGGGGGCTTCACCCTGTGTCCTTAGGAGGGGGTGGCCTTGAGGCAGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000392557.8
CDS-3UTR CCA 90 bp CAGGCAGCGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCACACACATATGAAATCGCAGCTGTaGCCTCGGTGGGTGTGTCCT +
Preference number: 4 (lower is better)
Translates to: QAAGPSPAHTRPTSDHTHMKSQL*PRWVCP
Trigger: AGGACACACCCACCGAGGCCACAGCTGCGATTTCAT...ATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCGCTGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392557.8
CDS-3UTR CCA 90 bp CCTGCACACACCCGGCCCACATCTGATCACACACATGCAGACGCTTGGTCCGGTACACCTGCAGGGCTCTaGCTTCCACTCTGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: PAHTRPTSDHTHADAWSGTPAGL*LPLWQR
Trigger: CCTCTGCCAGAGTGGAAGCCAGAGCCCTGCAGGTGT...ACCGGACCAAGCGTCTGCATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp CTGCACACACCCGGCCCACATCTGATCACACACATGCAGACGCTTGGTCCGGTTTATGCTCAGGACGGGTaGGCGCCGGTCTCAGCTGTC +
Preference number: 4 (lower is better)
Translates to: LHTPGPHLITHMQTLGPVYAQDG*APVSAV
Trigger: GACAGCTGAGACCGGCGCCCACCCGTCCTGAGCATA...AACCGGACCAAGCGTCTGCATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp TGTGTAGGACAAAAGTTCACTGTTCACCCAGGCCTAGCTAACACCCAACCGTGCCCACTGCGAGCGAGCTaGCCTCCCTTGCGGCGCGCC +
Preference number: 4 (lower is better)
Translates to: CVGQKFTVHPGLANTQPCPLRAS*PPLRRA
Trigger: GGCGCGCCGCAAGGGAGGCCAGCTCGCTCGCAGTGG...GCACGGTTGGGTGTTAGCTAGGCCTGGGTGAACAGTGAACTTTTGTCCTACACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548421.2
CDS-3UTR CCA 90 bp GTAGGACAAAAGTTCACTGTTCACCCAGGCCTAGCTAACACCCAACCGTGCCCACCCGGGACTGGAGTTTaGGGCGGGGCCTCGTCGGTG +
Preference number: 4 (lower is better)
Translates to: VGQKFTVHPGLANTQPCPPGTGV*GGASSV
Trigger: CACCGACGAGGCCCCGCCCCAAACTCCAGTCCCGGG...TGGGCACGGTTGGGTGTTAGCTAGGCCTGGGTGAACAGTGAACTTTTGTCCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548421.2
CDS-3UTR TCA 90 bp CAGGCAGCGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCACACACATCCTTCACAGTCCTCCTaGAGTCATGCATTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: QAAGPSPAHTRPTSDHTHPSQSS*SHAFWL
Trigger: CAGCCAGAATGCATGACTTCAGGAGGACTGTGAAGG...ATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCGCTGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR TCA 90 bp GGGTCAGTGAGGCACGGCTCTGCCTCAAGGCCACCCCCTCCTAAGGACACAGGGTCATCAATGGTCAACTaGCTGGTGGGGGTGTCTTCA +
Preference number: 4 (lower is better)
Translates to: GSVRHGSASRPPPPKDTGSSMVN*LVGVSS
Trigger: TGAAGACACCCCCACCAGTCAGTTGACCATTGATGA...CCCTGTGTCCTTAGGAGGGGGTGGCCTTGAGGCAGAGCCGTGCCTCACTGACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
ENST00000551787.5
CDS-3UTR TCA 90 bp GGGAGGATGAGGCCCCTGGGGGTCAGTGAGGCACGGCTCTGCCTCAAGGCCACCCCAGGTCGATCTTCATaGACTCATCAATGGTCAACT +
Preference number: 4 (lower is better)
Translates to: GRMRPLGVSEARLCLKATPGRSS*THQWST
Trigger: AGTTGACCATTGATGAGTTCATGAAGATCGACCTGG...GGTGGCCTTGAGGCAGAGCCGTGCCTCACTGACCCCCAGGGGCCTCATCCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000379932.8
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
ENST00000551787.5
CDS-3UTR TCA 90 bp AGGATGAGGCCCCTGGGGGTCAGTGAGGCACGGCTCTGCCTCAAGGCCACCCCCCCAGGTCGATCTTCATaGACTCATCAATGGTCAACT +
Preference number: 4 (lower is better)
Translates to: RMRPLGVSEARLCLKATPPGRSS*THQWST
Trigger: AGTTGACCATTGATGAGTTCATGAAGATCGACCTGG...GGGGGTGGCCTTGAGGCAGAGCCGTGCCTCACTGACCCCCAGGGGCCTCATCCT
60% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000379932.8
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
ENST00000551787.5
CDS-3UTR TCA 90 bp ACTCTGGCAGAGGCTGCTGGCGCCGAGTGCTGCTCAGGAGGGGACGGTGCGGAGCCAGGTCGATCTTCATaGACTCATCAATGGTCAACT +
Preference number: 4 (lower is better)
Translates to: TLAEAAGAECCSGGDGAEPGRSS*THQWST
Trigger: AGTTGACCATTGATGAGTTCATGAAGATCGACCTGG...CTCCGCACCGTCCCCTCCTGAGCAGCACTCGGCGCCAGCAGCCTCTGCCAGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR TCA 90 bp ACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCCCAGGTCGATCTTCATaGACTCATCAATGGTCAACT +
Preference number: 4 (lower is better)
Translates to: TRAVGQVPPVTRSLGAGAPGRSS*THQWST
Trigger: AGTTGACCATTGATGAGTTCATGAAGATCGACCTGG...GGCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR TCA 90 bp AGGATGAGGCCCCTGGGGGTCAGTGAGGCACGGCTCTGCCTCAAGGCCACCCCCGGAGCACGCTATAATTaGTCTTGCTGGAGATCTTCT +
Preference number: 4 (lower is better)
Translates to: RMRPLGVSEARLCLKATPGARYN*SCWRSS
Trigger: AGAAGATCTCCAGCAAGATCAATTATAGCGTGCTCC...GGGGGTGGCCTTGAGGCAGAGCCGTGCCTCACTGACCCCCAGGGGCCTCATCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR TCA 90 bp GTCGACGGCAGGCAGCGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCGGAGCACGCTATAATTaGTCTTGCTGGAGATCTTCT +
Preference number: 4 (lower is better)
Translates to: VDGRQRDPALHTPGPHLIGARYN*SCWRSS
Trigger: AGAAGATCTCCAGCAAGATCAATTATAGCGTGCTCC...GATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCGCTGCCTGCCGTCGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR TCA 90 bp GTTCACCCAGGCCTAGCTAACACCCAACCGTGCCCAGCATTGGCAGGTGCCCTCACAAGTCTCGGACTGTaGCCCCCATGTCATGAAGGC +
Preference number: 4 (lower is better)
Translates to: VHPGLANTQPCPALAGALTSLGL*PPCHEG
Trigger: GCCTTCATGACATGGGGGTCACAGTCCGAGACTTGT...GAGGGCACCTGCCAATGCTGGGCACGGTTGGGTGTTAGCTAGGCCTGGGTGAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548421.2
CDS-3UTR GCA 90 bp CTGCACACACCCGGCCCACATCTGATCACACACATGCAGACGCTTGGTCCGGTTATCCGCAGCTTCCTCTaGCCAGCTGTGTACGAGGGG +
Preference number: 4 (lower is better)
Translates to: LHTPGPHLITHMQTLGPVIRSFL*PAVYEG
Trigger: CCCCTCGTACACAGCTGGGCAGAGGAAGCTGCGGAT...AACCGGACCAAGCGTCTGCATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp AGAAACACAATCCCAATGGTAAGTTCCACATGGGACGAGGGCTGTGGGACAGGTCTCGGGGCTTCCTGCTaGTTCCGAGCTGCCGGGGGC +
Preference number: 4 (lower is better)
Translates to: RNTIPMVSSTWDEGCGTGLGASC*FRAAGG
Trigger: GCCCCCGGCAGCTCGGAAGCAGCAGGAAGCCCCGAG...ACCTGTCCCACAGCCCTCGTCCCATGTGGAACTTACCATTGGGATTGTGTTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp AGGACACAGGGTGAAGCCCCCTCGGCCACATCCGGGGCAGCCATGCCAGAGCTGTGTGTTCCTTGTAGATaGCGAGCTCCTTCTCTTTCG +
Preference number: 4 (lower is better)
Translates to: RTQGEAPSATSGAAMPELCVPCR*RAPSLS
Trigger: CGAAAGAGAAGGAGCTCGGCATCTACAAGGAACACA...CAGCTCTGGCATGGCTGCCCCGGATGTGGCCGAGGGGGCTTCACCCTGTGTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp GCGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCACACACATGCAGACTTGGCTCCCGTCGCTTaGAAGACTTCTTGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: AGPSPAHTRPTSDHTHADLAPVA*KTSWAC
Trigger: ACAAGCCCAAGAAGTCTTGCAAGCGACGGGAGCCAA...GTCTGCATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp TGCTGCTCAGGAGGGGACGGTGCGGAGGGTGGGCTGGAGACTCCAGAGCTGGTCCTGGAGATCTTCTTCTaGTCCAGCATCTTCTCGATG +
Preference number: 4 (lower is better)
Translates to: CCSGGDGAEGGLETPELVLEIFF*SSIFSM
Trigger: CATCGAGAAGATGCTGGAGCAGAAGAAGATCTCCAG...GACCAGCTCTGGAGTCTCCAGCCCACCCTCCGCACCGTCCCCTCCTGAGCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp AGCCCGTCTGATGCTGAGGAGACCCGCGAGGCCCCCTGCCAGGACATCACCTGCCTGGAGATCTTCTTCTaGTCCAGCATCTTCTCGATG +
Preference number: 4 (lower is better)
Translates to: SPSDAEETREAPCQDITCLEIFF*SSIFSM
Trigger: CATCGAGAAGATGCTGGAGCAGAAGAAGATCTCCAG...GCAGGTGATGTCCTGGCAGGGGGCCTCGCGGGTCTCCTCAGCATCAGACGGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp GCTCTGCCTCAAGGCCACCCCCTCCTAAGGACACAGGGTGAAGCCCCCTCGGCCCTGGAGATCTTCTTCTaGTCCAGCATCTTCTCGATG +
Preference number: 4 (lower is better)
Translates to: ALPQGHPLLRTQGEAPSALEIFF*SSIFSM
Trigger: CATCGAGAAGATGCTGGAGCAGAAGAAGATCTCCAG...GGCCGAGGGGGCTTCACCCTGTGTCCTTAGGAGGGGGTGGCCTTGAGGCAGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp AGAAACACAATCCCAATGGTAAGTTCCACATGGGACGAGGGCTGTGGGACAGGTTGTGCATCCTCCCTGTaGGGACTGCCCCCGCCGGCG +
Preference number: 4 (lower is better)
Translates to: RNTIPMVSSTWDEGCGTGCASSL*GLPPPA
Trigger: CGCCGGCGGGGGCAGTCCGCACAGGGAGGATGCACA...ACCTGTCCCACAGCCCTCGTCCCATGTGGAACTTACCATTGGGATTGTGTTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp CTGCACACACCCGGCCCACATCTGATCACACACATGCAGACGCTTGGTCCGGTTGCTATGCTCGGGCTGTaGATCCTCCCTGTGCGGACT +
Preference number: 4 (lower is better)
Translates to: LHTPGPHLITHMQTLGPVAMLGL*ILPVRT
Trigger: AGTCCGCACAGGGAGGATGCACAGCCCGAGCATAGC...AACCGGACCAAGCGTCTGCATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp CCTGCACACACCCGGCCCACATCTGATCACACACATGCAGACGCTTGGTCCGGTCGTGGCCACCTTCTTTaGTGGCTGCGTAGACACCAG +
Preference number: 4 (lower is better)
Translates to: PAHTRPTSDHTHADAWSGRGHLL*WLRRHQ
Trigger: CTGGTGTCTACGCAGCCAGCAAAGAAGGTGGCCACG...ACCGGACCAAGCGTCTGCATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp GCTGCGGGCCAAGTTGGGGCAGGACATACAGCCCATTCCATGGGGAGGATGAGGAGCCATAGTCGTTGCTaGCCATCATCTGCAGGGCAC +
Preference number: 4 (lower is better)
Translates to: AAGQVGAGHTAHSMGRMRSHSRC*PSSAGH
Trigger: GTGCCCTGCAGATGATGGGCAGCAACGACTATGGCT...CCTCATCCTCCCCATGGAATGGGCTGTATGTCCTGCCCCAACTTGGCCCGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp ACGGGGAACTCCCAGCGCCAGGACACTATGCAGGCTATGCCCGCACTGCCTACAAGCCATAGTCGTTGCTaGCCATCATCTGCAGGGCAC +
Preference number: 4 (lower is better)
Translates to: TGNSQRQDTMQAMPALPTSHSRC*PSSAGH
Trigger: GTGCCCTGCAGATGATGGGCAGCAACGACTATGGCT...TGTAGGCAGTGCGGGCATAGCCTGCATAGTGTCCTGGCGCTGGGAGTTCCCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp CCTGCACACACCCGGCCCACATCTGATCACACACATGCAGACGCTTGGTCCGGTGACCAGCAGTGGGGCTaGCCCAAGCCTGTTTCCTTA +
Preference number: 4 (lower is better)
Translates to: PAHTRPTSDHTHADAWSGDQQWG*PKPVSL
Trigger: TAAGGAAACAGGCTTGGGGCAGCCCCACTGCTGGTC...ACCGGACCAAGCGTCTGCATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp GCCCTGCACACACCCGGCCCACATCTGATCACACACATGCAGACGCTTGGTCCGCCTTCAAGGAGCTGCTaGCTCTCAAGTGCCAGATCC +
Preference number: 4 (lower is better)
Translates to: ALHTPGPHLITHMQTLGPPSRSC*LSSARS
Trigger: GGATCTGGCACTTGAGAGGCAGCAGCTCCTTGAAGG...CGGACCAAGCGTCTGCATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp GCTGCGGGCCAAGTTGGGGCAGGACATACAGCCCATTCCATGGGGAGGATGAGGGGACCTTCAAGGAGCTaGTGCCTCTCAAGTGCCAGA +
Preference number: 4 (lower is better)
Translates to: AAGQVGAGHTAHSMGRMRGPSRS*CLSSAR
Trigger: TCTGGCACTTGAGAGGCAGCAGCTCCTTGAAGGTCC...CCTCATCCTCCCCATGGAATGGGCTGTATGTCCTGCCCCAACTTGGCCCGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp GGGAGGATGAGGCCCCTGGGGGTCAGTGAGGCACGGCTCTGCCTCAAGGCCACCGTTATTCCTTCTCACTaGATTCCCCAAATGGACCCA +
Preference number: 4 (lower is better)
Translates to: GRMRPLGVSEARLCLKATVIPSH*IPQMDP
Trigger: TGGGTCCATTTGGGGAATGCAGTGAGAAGGAATAAC...GGTGGCCTTGAGGCAGAGCCGTGCCTCACTGACCCCCAGGGGCCTCATCCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379932.8
CDS-3UTR GCA 90 bp CTGCCATGGAGACCCACACTCCCACAAGTCTCGGACTGTGACCCCCATGTCATGGCTAACACCCAACCGTaGCCAGCATTGGCAGGTGCC +
Preference number: 4 (lower is better)
Translates to: LPWRPTLPQVSDCDPHVMANTQP*PALAGA
Trigger: GGCACCTGCCAATGCTGGGCACGGTTGGGTGTTAGC...CATGACATGGGGGTCACAGTCCGAGACTTGTGGGAGTGTGGGTCTCCATGGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548421.2
CDS-3UTR CCA 90 bp GCCCTGCACACACCCGGCCCACATCTGATCACACACATGCAGACGCTTGGTCCGCAGGTGCGCAAAGCGTaGAATATACAGGCACGGGTC +
Preference number: 4 (lower is better)
Translates to: ALHTPGPHLITHMQTLGPQVRKA*NIQARV
Trigger: GACCCGTGCCTGTATATTCCACGCTTTGCGCACCTG...CGGACCAAGCGTCTGCATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000547530.7
CDS-3UTR CCA 90 bp GGGAGGATGAGGCCCCTGGGGGTCAGTGAGGCACGGCTCTGCCTCAAGGCCACCCAATGGTCAACTGACTaGTGGGGGTGTCTTCAAATT +
Preference number: 4 (lower is better)
Translates to: GRMRPLGVSEARLCLKATQWSTD*WGCLQI
Trigger: AATTTGAAGACACCCCCACCAGTCAGTTGACCATTG...GGTGGCCTTGAGGCAGAGCCGTGCCTCACTGACCCCCAGGGGCCTCATCCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000379932.8
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
ENST00000551787.5
CDS-3UTR CCA 90 bp ACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCCAATGGTCAACTGACTaGTGGGGGTGTCTTCAAATT +
Preference number: 4 (lower is better)
Translates to: TRAVGQVPPVTRSLGAGAQWSTD*WGCLQI
Trigger: AATTTGAAGACACCCCCACCAGTCAGTTGACCATTG...GGCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GCTGCGGGCCAAGTTGGGGCAGGACATACAGCCCATTCCATGGGGAGGATGAGGAGATGCATTCGCGGATaGAGTCTGAGATGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: AAGQVGAGHTAHSMGRMRRCIRG*SLRCPG
Trigger: GCCTGGGCATCTCAGACTCCATCCGCGAATGCATCT...CCTCATCCTCCCCATGGAATGGGCTGTATGTCCTGCCCCAACTTGGCCCGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GGACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGGCTTGCAAGACTTCTTaGGCTTGTGTTCCTTGTAGA +
Preference number: 4 (lower is better)
Translates to: GRGLWDRCHLSPGVSALGACKTS*ACVPCR
Trigger: TCTACAAGGAACACAAGCCCAAGAAGTCTTGCAAGC...CCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp AACACCACACTGCCAGCCTTGGAGGGTCCTTGGATGAGTCGACGGCAGGCAGCGAGGACATCACCTGCCTaGAGGCCACACTTCAGTAGC +
Preference number: 4 (lower is better)
Translates to: NTTLPALEGPWMSRRQAARTSPA*RPHFSS
Trigger: GCTACTGAAGTGTGGCCTCCAGGCAGGTGATGTCCT...CGCTGCCTGCCGTCGACTCATCCAAGGACCCTCCAAGGCTGGCAGTGTGGTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GCTCTGCCTCAAGGCCACCCCCTCCTAAGGACACAGGGTGAAGCCCCCTCGGCCACGGGTCTTTTTCTATaGAAACAGACGGCTGGGACA +
Preference number: 4 (lower is better)
Translates to: ALPQGHPLLRTQGEAPSATGLFL*KQTAGT
Trigger: TGTCCCAGCCGTCTGTTTCCATAGAAAAAGACCCGT...GGCCGAGGGGGCTTCACCCTGTGTCCTTAGGAGGGGGTGGCCTTGAGGCAGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000392557.8
ENST00000551787.5
CDS-3UTR CCA 90 bp CTGCACACACCCGGCCCACATCTGATCACACACATGCAGACGCTTGGTCCGGTTTGCTGCGGGCCAAGTTaGGGCAGGACATACAGCCCA +
Preference number: 4 (lower is better)
Translates to: LHTPGPHLITHMQTLGPVCCGPS*GRTYSP
Trigger: TGGGCTGTATGTCCTGCCCCAACTTGGCCCGCAGCA...AACCGGACCAAGCGTCTGCATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GGGAGGATGAGGCCCCTGGGGGTCAGTGAGGCACGGCTCTGCCTCAAGGCCACCCGTTACCTTTTTCTATaGAAACAGACGGCTGGGACA +
Preference number: 4 (lower is better)
Translates to: GRMRPLGVSEARLCLKATRYLFL*KQTAGT
Trigger: TGTCCCAGCCGTCTGTTTCCATAGAAAAAGGTAACG...GGTGGCCTTGAGGCAGAGCCGTGCCTCACTGACCCCCAGGGGCCTCATCCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000379932.8
CDS-3UTR CCA 90 bp TGTGTAGGACAAAAGTTCACTGTTCACCCAGGCCTAGCTAACACCCAACCGTGCGCGGGGCCTCGTCGGTaGGCGACACCGGGGACTAGA +
Preference number: 4 (lower is better)
Translates to: CVGQKFTVHPGLANTQPCAGPRR*ATPGTR
Trigger: TCTAGTCCCCGGTGTCGCCCACCGACGAGGCCCCGC...GCACGGTTGGGTGTTAGCTAGGCCTGGGTGAACAGTGAACTTTTGTCCTACACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000548421.2
CDS-3UTR CCA 90 bp TGTGTAGGACAAAAGTTCACTGTTCACCCAGGCCTAGCTAACACCCAACCGTGCAGCGCAGCCCGGGACTaGAGTTTGGGGCGGGGCCTC +
Preference number: 4 (lower is better)
Translates to: CVGQKFTVHPGLANTQPCSAARD*SLGRGL
Trigger: GAGGCCCCGCCCCAAACTCCAGTCCCGGGCTGCGCT...GCACGGTTGGGTGTTAGCTAGGCCTGGGTGAACAGTGAACTTTTGTCCTACACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000548421.2
CDS-3UTR TCA 90 bp CAGGCAGCGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCACACACATTCATCAATGGTCAACTaGCTGGTGGGGGTGTCTTCA +
Preference number: 4 (lower is better)
Translates to: QAAGPSPAHTRPTSDHTHSSMVN*LVGVSS
Trigger: TGAAGACACCCCCACCAGTCAGTTGACCATTGATGA...ATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCGCTGCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR TCA 90 bp TGCTGCTCAGGAGGGGACGGTGCGGAGGGTGGGCTGGAGACTCCAGAGCTGGTCCCAGGTCGATCTTCATaGACTCATCAATGGTCAACT +
Preference number: 4 (lower is better)
Translates to: CCSGGDGAEGGLETPELVPGRSS*THQWST
Trigger: AGTTGACCATTGATGAGTTCATGAAGATCGACCTGG...GACCAGCTCTGGAGTCTCCAGCCCACCCTCCGCACCGTCCCCTCCTGAGCAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR TCA 90 bp GACGGCAGGCAGCGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCACAGGAGCACGCTATAATTaGTCTTGCTGGAGATCTTCT +
Preference number: 4 (lower is better)
Translates to: DGRQRDPALHTPGPHLITGARYN*SCWRSS
Trigger: AGAAGATCTCCAGCAAGATCAATTATAGCGTGCTCC...TGTGATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCGCTGCCTGCCGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR TCA 90 bp AAGTTCACTGTTCACCCAGGCCTAGCTAACACCCAACCGTGCCCAGCATTGGCAGCGGGCCCTTGGCGATaGACGCAGTCGGGGACTAAA +
Preference number: 4 (lower is better)
Translates to: KFTVHPGLANTQPCPALAAGPWR*TQSGTK
Trigger: TTTAGTCCCCGACTGCGTTCATCGCCAAGGGCCCGC...TGCCAATGCTGGGCACGGTTGGGTGTTAGCTAGGCCTGGGTGAACAGTGAACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548421.2
CDS-3UTR GCA 90 bp AGAAACACAATCCCAATGGTAAGTTCCACATGGGACGAGGGCTGTGGGACAGGTGCACACCTGCCTCAATaGGGTGCCGGCCGGGGTGAC +
Preference number: 4 (lower is better)
Translates to: RNTIPMVSSTWDEGCGTGAHLPQ*GAGRGD
Trigger: GTCACCCCGGCCGGCACCGCATTGAGGCAGGTGTGC...ACCTGTCCCACAGCCCTCGTCCCATGTGGAACTTACCATTGGGATTGTGTTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327359.7
ENST00000440513.7
CDS-3UTR GCA 90 bp GCCCTGCACACACCCGGCCCACATCTGATCACACACATGCAGACGCTTGGTCCGGTCCTCCTGAAGTCATaGATTCTGGCTGCAACCAGG +
Preference number: 4 (lower is better)
Translates to: ALHTPGPHLITHMQTLGPVLLKS*ILAATR
Trigger: CCTGGTTGCAGCCAGAATGCATGACTTCAGGAGGAC...CGGACCAAGCGTCTGCATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp GCTGCGGGCCAAGTTGGGGCAGGACATACAGCCCATTCCATGGGGAGGATGAGGTGCTCTGAGAGGAGATaGATTCGCGGATGGAGTCTG +
Preference number: 4 (lower is better)
Translates to: AAGQVGAGHTAHSMGRMRCSERR*IRGWSL
Trigger: CAGACTCCATCCGCGAATGCATCTCCTCTCAGAGCA...CCTCATCCTCCCCATGGAATGGGCTGTATGTCCTGCCCCAACTTGGCCCGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp CAGGCAGCGGGACCCAGCCCTGCACACACCCGGCCCACATCTGATCACACACATCATCTTTGGGGTCGCTaGTCTGAGAGGAGATGCATT +
Preference number: 4 (lower is better)
Translates to: QAAGPSPAHTRPTSDHTHHLWGR*SERRCI
Trigger: AATGCATCTCCTCTCAGAGCAGCGACCCCAAAGATG...ATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCGCTGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp GTGGGCGCCGGTCTCAGCTGTCGGGCACTCAGTTCACCTGCCGGCAGCCGCAGGCTCTTTCGCTATTCTTaGTTCTTTTTCCCTCTGTTC +
Preference number: 4 (lower is better)
Translates to: VGAGLSCRALSSPAGSRRLFRYS*FFFPLF
Trigger: GAACAGAGGGAAAAAGAAGCAAGAATAGCGAAAGAG...CCTGCGGCTGCCGGCAGGTGAACTGAGTGCCCGACAGCTGAGACCGGCGCCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp GGGTCAGTGAGGCACGGCTCTGCCTCAAGGCCACCCCCTCCTAAGGACACAGGGTGTGTTCCTTGTAGATaGCGAGCTCCTTCTCTTTCG +
Preference number: 4 (lower is better)
Translates to: GSVRHGSASRPPPPKDTGCVPCR*RAPSLS
Trigger: CGAAAGAGAAGGAGCTCGGCATCTACAAGGAACACA...CCCTGTGTCCTTAGGAGGGGGTGGCCTTGAGGCAGAGCCGTGCCTCACTGACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp ATGGGACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGTGTGTTCCTTGTAGATaGCGAGCTCCTTCTCTTTCG +
Preference number: 4 (lower is better)
Translates to: MGRGLWDRCHLSPGVSALCVPCR*RAPSLS
Trigger: CGAAAGAGAAGGAGCTCGGCATCTACAAGGAACACA...CAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTCCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp AACACCACACTGCCAGCCTTGGAGGGTCCTTGGATGAGTCGACGGCAGGCAGCGTTGGCTCCCGTCGCTTaGAAGACTTCTTGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: NTTLPALEGPWMSRRQAALAPVA*KTSWAC
Trigger: ACAAGCCCAAGAAGTCTTGCAAGCGACGGGAGCCAA...CGCTGCCTGCCGTCGACTCATCCAAGGACCCTCCAAGGCTGGCAGTGTGGTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp CCTGCACACACCCGGCCCACATCTGATCACACACATGCAGACGCTTGGTCCGGTGGACCTTCAAGGAGCTaGTGCCTCTCAAGTGCCAGA +
Preference number: 4 (lower is better)
Translates to: PAHTRPTSDHTHADAWSGGPSRS*CLSSAR
Trigger: TCTGGCACTTGAGAGGCAGCAGCTCCTTGAAGGTCC...ACCGGACCAAGCGTCTGCATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp AGGATGAGGCCCCTGGGGGTCAGTGAGGCACGGCTCTGCCTCAAGGCCACCCCCCCTGGAAACTGCTTATaGCCGTTACCTTTTTCTATG +
Preference number: 4 (lower is better)
Translates to: RMRPLGVSEARLCLKATPPGNCL*PLPFSM
Trigger: CATAGAAAAAGGTAACGGGCATAAGCAGTTTCCAGG...GGGGGTGGCCTTGAGGCAGAGCCGTGCCTCACTGACCCCCAGGGGCCTCATCCT
59% GC, longest homopolymer 7 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000379932.8
CDS-3UTR CCA 90 bp CTGCCATGGAGACCCACACTCCCACAAGTCTCGGACTGTGACCCCCATGTCATGGTGTCCAGGCAGTGCTaGTTCAGCTGCAGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: LPWRPTLPQVSDCDPHVMVSRQC*FSCSWF
Trigger: GAACCAGCTGCAGCTGAACCAGCACTGCCTGGACAC...CATGACATGGGGGTCACAGTCCGAGACTTGTGGGAGTGTGGGTCTCCATGGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548421.2
CDS-3UTR CCA 90 bp CCTGCACACACCCGGCCCACATCTGATCACACACATGCAGACGCTTGGTCCGGTACGTACACATTCACCTaGAGCAGGTCGCTGAGGTCC +
Preference number: 4 (lower is better)
Translates to: PAHTRPTSDHTHADAWSGTYTFT*SRSLRS
Trigger: GGACCTCAGCGACCTGCTCCAGGTGAATGTGTACGT...ACCGGACCAAGCGTCTGCATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GTCTGGCCTGCTGCGGGCCAAGTTGGGGCAGGACATACAGCCCATTCCATGGGGTGGTCAACTGACTGGTaGGGGTGTCTTCAAATTCCG +
Preference number: 4 (lower is better)
Translates to: VWPAAGQVGAGHTAHSMGWSTDW*GCLQIP
Trigger: CGGAATTTGAAGACACCCCCACCAGTCAGTTGACCA...CCCCATGGAATGGGCTGTATGTCCTGCCCCAACTTGGCCCGCAGCAGGCCAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp CTGCACACACCCGGCCCACATCTGATCACACACATGCAGACGCTTGGTCCGGTTGCAAAGCCTCTCCCGTaGCCACCTTCTTTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: LHTPGPHLITHMQTLGPVAKPLP*PPSLLA
Trigger: AGCCAGCAAAGAAGGTGGCCACGGGAGAGGCTTTGC...AACCGGACCAAGCGTCTGCATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp CACACATGCAGACGCTTGGTCCGGTTTCCCTTGCTGAATAGAAACACAATCCCACAGGAGTCTCGGCGCTaGGGCCTGCCTGCTGCGGTC +
Preference number: 4 (lower is better)
Translates to: HTCRRLVRFPLLNRNTIPQESRR*GLPAAV
Trigger: GACCGCAGCAGGCAGGCCCCAGCGCCGAGACTCCTG...TGGGATTGTGTTTCTATTCAGCAAGGGAAACCGGACCAAGCGTCTGCATGTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp AACACCACACTGCCAGCCTTGGAGGGTCCTTGGATGAGTCGACGGCAGGCAGCGATGGTAAGTTCCACATaGGACGAGGGCTGTGGGACA +
Preference number: 4 (lower is better)
Translates to: NTTLPALEGPWMSRRQAAMVSST*DEGCGT
Trigger: TGTCCCACAGCCCTCGTCCCATGTGGAACTTACCAT...CGCTGCCTGCCGTCGACTCATCCAAGGACCCTCCAAGGCTGGCAGTGTGGTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GCTGCGGGCCAAGTTGGGGCAGGACATACAGCCCATTCCATGGGGAGGATGAGGATGGTAAGTTCCACATaGGACGAGGGCTGTGGGACA +
Preference number: 4 (lower is better)
Translates to: AAGQVGAGHTAHSMGRMRMVSST*DEGCGT
Trigger: TGTCCCACAGCCCTCGTCCCATGTGGAACTTACCAT...CCTCATCCTCCCCATGGAATGGGCTGTATGTCCTGCCCCAACTTGGCCCGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GGGTCAGTGAGGCACGGCTCTGCCTCAAGGCCACCCCCTCCTAAGGACACAGGGACGGGTCTTTTTCTATaGAAACAGACGGCTGGGACA +
Preference number: 4 (lower is better)
Translates to: GSVRHGSASRPPPPKDTGTGLFL*KQTAGT
Trigger: TGTCCCAGCCGTCTGTTTCCATAGAAAAAGACCCGT...CCCTGTGTCCTTAGGAGGGGGTGGCCTTGAGGCAGAGCCGTGCCTCACTGACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000392557.8
ENST00000551787.5
CDS-3UTR CCA 90 bp GTGGGGCTGCCCCAAGCCTGTTTCCTTAATAGTAGCAACACCACACTGCCAGCCGCCTTGGAGGGTCCTTaGATGAGTCGACGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: VGLPQACFLNSSNTTLPAALEGP*MSRRQA
Trigger: TGCCTGCCGTCGACTCATCCAAGGACCCTCCAAGGC...GGCTGGCAGTGTGGTGTTGCTACTATTAAGGAAACAGGCTTGGGGCAGCCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp CTGCACACACCCGGCCCACATCTGATCACACACATGCAGACGCTTGGTCCGGTTATGCAGGGCCACAGCTaGAGGCAGAGGACCTTCAAG +
Preference number: 4 (lower is better)
Translates to: LHTPGPHLITHMQTLGPVMQGHS*RQRTFK
Trigger: CTTGAAGGTCCTCTGCCTCCAGCTGTGGCCCTGCAT...AACCGGACCAAGCGTCTGCATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR TCA 90 bp AGAAACACAATCCCAATGGTAAGTTCCACATGGGACGAGGGCTGTGGGACAGGTCCTGGAGCAGGTCGCTaGGGTCCAGGAGCATGTGCG +
Preference number: 4 (lower is better)
Translates to: RNTIPMVSSTWDEGCGTGPGAGR*GPGACA
Trigger: CGCACATGCTCCTGGACCTCAGCGACCTGCTCCAGG...ACCTGTCCCACAGCCCTCGTCCCATGTGGAACTTACCATTGGGATTGTGTTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000440513.7
ENST00000547530.7
CDS-3UTR TCA 90 bp ACATGGGACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCCCAGGTCGATCTTCATaGACTCATCAATGGTCAACT +
Preference number: 4 (lower is better)
Translates to: TWDEGCGTGATCHQESRRPGRSS*THQWST
Trigger: AGTTGACCATTGATGAGTTCATGAAGATCGACCTGG...GCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTCCCATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR TCA 90 bp GCCCTGCACACACCCGGCCCACATCTGATCACACACATGCAGACGCTTGGTCCGCAGCCTTTTCCTTCCTaGCTTGTAGTTGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: ALHTPGPHLITHMQTLGPQPFPS*LVVAPP
Trigger: TGGAGGAGCAACTACAAGTCAGGAAGGAAAAGGCTG...CGGACCAAGCGTCTGCATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392557.8
CDS-3UTR GCA 90 bp AGAAACACAATCCCAATGGTAAGTTCCACATGGGACGAGGGCTGTGGGACAGGTGGAGCATGTGCGGCGTaGCCTCCGTACGGCAGACCA +
Preference number: 4 (lower is better)
Translates to: RNTIPMVSSTWDEGCGTGGACAA*PPYGRP
Trigger: TGGTCTGCCGTACGGAGGGCACGCCGCACATGCTCC...ACCTGTCCCACAGCCCTCGTCCCATGTGGAACTTACCATTGGGATTGTGTTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000440513.7
ENST00000547530.7
CDS-3UTR GCA 90 bp GGGTGGGGGTGTCTGCCTCGGACGAGGCAGGTATCTGGATGCAGGGCCACAGCTGATGCAGAGCTCTCTTaGCAAGAGAAGAAACGTCTT +
Preference number: 4 (lower is better)
Translates to: GWGCLPRTRQVSGCRATADAELS*QEKKRL
Trigger: AAGACGTTTCTTCTCTTGGCAAGAGAGCTCTGCATC...AGCTGTGGCCCTGCATCCAGATACCTGCCTCGTCCGAGGCAGACACCCCCACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379937.6
ENST00000547530.7
CDS-3UTR GCA 90 bp ATGGGACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGATGCAGAGCTCTCTTaGCAAGAGAAGAAACGTCTT +
Preference number: 4 (lower is better)
Translates to: MGRGLWDRCHLSPGVSALDAELS*QEKKRL
Trigger: AAGACGTTTCTTCTCTTGGCAAGAGAGCTCTGCATC...CAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTCCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000440513.7
ENST00000547530.7
CDS-3UTR GCA 90 bp GGTGGGGGTGTCTGCCTCGGACGAGGCAGGTATCTGGATGCAGGGCCACAGCTGGATGCAGAGCTCTCTTaGCAAGAGAAGAAACGTCTT +
Preference number: 4 (lower is better)
Translates to: GGGVCLGRGRYLDAGPQLDAELS*QEKKRL
Trigger: AAGACGTTTCTTCTCTTGGCAAGAGAGCTCTGCATC...CAGCTGTGGCCCTGCATCCAGATACCTGCCTCGTCCGAGGCAGACACCCCCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379937.6
ENST00000547530.7
CDS-3UTR GCA 90 bp CCTGCACACACCCGGCCCACATCTGATCACACACATGCAGACGCTTGGTCCGGTTGCTCTGAGAGGAGATaGATTCGCGGATGGAGTCTG +
Preference number: 4 (lower is better)
Translates to: PAHTRPTSDHTHADAWSGCSERR*IRGWSL
Trigger: CAGACTCCATCCGCGAATGCATCTCCTCTCAGAGCA...ACCGGACCAAGCGTCTGCATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp GACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGCCTCTTTCGCTATTCTTaGTTCTTTTTCCCTCTGTTC +
Preference number: 4 (lower is better)
Translates to: DEGCGTGATCHQESRRWGLFRYS*FFFPLF
Trigger: GAACAGAGGGAAAAAGAAGCAAGAATAGCGAAAGAG...GCCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp CTGCACACACCCGGCCCACATCTGATCACACACATGCAGACGCTTGGTCCGGTTAGCCATAGTCGTTGCTaGCCATCATCTGCAGGGCAC +
Preference number: 4 (lower is better)
Translates to: LHTPGPHLITHMQTLGPVSHSRC*PSSAGH
Trigger: GTGCCCTGCAGATGATGGGCAGCAACGACTATGGCT...AACCGGACCAAGCGTCTGCATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp CACACATGCAGACGCTTGGTCCGGTTTCCCTTGCTGAATAGAAACACAATCCCAAGCGGGACCCAGCCCTaGACACACCCGGCCCACATC +
Preference number: 4 (lower is better)
Translates to: HTCRRLVRFPLLNRNTIPSGTQP*THPAHI
Trigger: GATGTGGGCCGGGTGTGTGCAGGGCTGGGTCCCGCT...TGGGATTGTGTTTCTATTCAGCAAGGGAAACCGGACCAAGCGTCTGCATGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp AGAAACACAATCCCAATGGTAAGTTCCACATGGGACGAGGGCTGTGGGACAGGTGACAGGGAGCGCCACTaGCCTCTGGCTCTGTCCACG +
Preference number: 4 (lower is better)
Translates to: RNTIPMVSSTWDEGCGTGDRERH*PLALST
Trigger: CGTGGACAGAGCCAGAGGGCAGTGGCGCTCCCTGTC...ACCTGTCCCACAGCCCTCGTCCCATGTGGAACTTACCATTGGGATTGTGTTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR GCA 90 bp AGGATGAGGCCCCTGGGGGTCAGTGAGGCACGGCTCTGCCTCAAGGCCACCCCCATTTCTCCTGGAAACTaGTTATGCCCGTTACCTTTT +
Preference number: 4 (lower is better)
Translates to: RMRPLGVSEARLCLKATPISPGN*LCPLPF
Trigger: AAAAGGTAACGGGCATAAGCAGTTTCCAGGAGAAAT...GGGGGTGGCCTTGAGGCAGAGCCGTGCCTCACTGACCCCCAGGGGCCTCATCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000379932.8
CDS-3UTR GCA 90 bp AGAAACACAATCCCAATGGTAAGTTCCACATGGGACGAGGGCTGTGGGACAGGTAGCTCATGGCCGACGTaGACTTCGTCGTGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: RNTIPMVSSTWDEGCGTGSSWPT*TSSWGP
Trigger: GGGGCCCCACGACGAAGTGCACGTCGGCCATGAGCT...ACCTGTCCCACAGCCCTCGTCCCATGTGGAACTTACCATTGGGATTGTGTTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446501.6
CDS-3UTR GCA 90 bp AATCTCCTTTGTGTAGGACAAAAGTTCACTGTTCACCCAGGCCTAGCTAACACCGGGCCTCGCGGTGAGTaGAGCCGGGGACGGGACCCA +
Preference number: 4 (lower is better)
Translates to: NLLCVGQKFTVHPGLANTGPRGE*SRGRDP
Trigger: TGGGTCCCGTCCCCGGCTGCACTCACCGCGAGGCCC...GGTGTTAGCTAGGCCTGGGTGAACAGTGAACTTTTGTCCTACACAAAGGAGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548421.2
CDS-3UTR GCA 90 bp GTAGGACAAAAGTTCACTGTTCACCCAGGCCTAGCTAACACCCAACCGTGCCCACCCAGCATTGGCAGGTaGCCTCCTGCCATGGAGACC +
Preference number: 4 (lower is better)
Translates to: VGQKFTVHPGLANTQPCPPSIGR*PPAMET
Trigger: GGTCTCCATGGCAGGAGGGCACCTGCCAATGCTGGG...TGGGCACGGTTGGGTGTTAGCTAGGCCTGGGTGAACAGTGAACTTTTGTCCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548421.2
CDS-3UTR CCA 90 bp CTGCACACACCCGGCCCACATCTGATCACACACATGCAGACGCTTGGTCCGGTTGCCTCAGGGCAGTCATaGACACCTCGTGGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: LHTPGPHLITHMQTLGPVASGQS*TPRGSS
Trigger: AGAAGAACCACGAGGTGTCCATGACTGCCCTGAGGC...AACCGGACCAAGCGTCTGCATGTGTGTGATCAGATGTGGGCCGGGTGTGTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000547530.7
CDS-3UTR CCA 90 bp AACACCACACTGCCAGCCTTGGAGGGTCCTTGGATGAGTCGACGGCAGGCAGCGTGGTCAACTGACTGGTaGGGGTGTCTTCAAATTCCG +
Preference number: 4 (lower is better)
Translates to: NTTLPALEGPWMSRRQAAWSTDW*GCLQIP
Trigger: CGGAATTTGAAGACACCCCCACCAGTCAGTTGACCA...CGCTGCCTGCCGTCGACTCATCCAAGGACCCTCCAAGGCTGGCAGTGTGGTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp ATGGGACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGCAATGGTCAACTGACTaGTGGGGGTGTCTTCAAATT +
Preference number: 4 (lower is better)
Translates to: MGRGLWDRCHLSPGVSALQWSTD*WGCLQI
Trigger: AATTTGAAGACACCCCCACCAGTCAGTTGACCATTG...CAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTCCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp ACAGGGCCAGCACACTCAGCCCTCCACACACTTGGACCAGCAGTGGGGCTGCCCCAATGGTCAACTGACTaGTGGGGGTGTCTTCAAATT +
Preference number: 4 (lower is better)
Translates to: TGPAHSALHTLGPAVGLPQWSTD*WGCLQI
Trigger: AATTTGAAGACACCCCCACCAGTCAGTTGACCATTG...GGGCAGCCCCACTGCTGGTCCAAGTGTGTGGAGGGCTGAGTGTGCTGGCCCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp CTCCTAAGGACACAGGGTGAAGCCCCCTCGGCCACATCCGGGGCAGCCATGCCACAATGGTCAACTGACTaGTGGGGGTGTCTTCAAATT +
Preference number: 4 (lower is better)
Translates to: LLRTQGEAPSATSGAAMPQWSTD*WGCLQI
Trigger: AATTTGAAGACACCCCCACCAGTCAGTTGACCATTG...TGGCATGGCTGCCCCGGATGTGGCCGAGGGGGCTTCACCCTGTGTCCTTAGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000379937.6
ENST00000392557.8
ENST00000446501.6
ENST00000547530.7
ENST00000551787.5
CDS-3UTR CCA 90 bp GGACGAGGGCTGTGGGACAGGTGCCACCTGTCACCAGGAGTCTCGGCGCTGGGGTTGCATCCTGGTAACTaGATATTTCACCTTCAACCT +
Preference number: 4 (lower is better)
Translates to: GRGLWDRCHLSPGVSALGLHPGN*IFHLQP
Trigger: AGGTTGAAGGTGAAATATCCAGTTACCAGGATGCAA...CCCCAGCGCCGAGACTCCTGGTGACAGGTGGCACCTGTCCCACAGCCCTCGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7
CDS-3UTR CCA 90 bp GCCCGTCTGATGCTGAGGAGACCCGCGAGGCCCCCTGCCAGGACATCACCTGCCTTGCATCCTGGTAACTaGATATTTCACCTTCAACCT +
Preference number: 4 (lower is better)
Translates to: ARLMLRRPARPPARTSPALHPGN*IFHLQP
Trigger: AGGTTGAAGGTGAAATATCCAGTTACCAGGATGCAA...GGCAGGTGATGTCCTGGCAGGGGGCCTCGCGGGTCTCCTCAGCATCAGACGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327359.7
ENST00000379937.6
ENST00000392557.8
ENST00000440513.7
ENST00000446501.6
ENST00000547530.7