RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BORCS8 (Homo sapiens)

Ensembl gene IDs: ENSG00000254901

Ensembl transcript IDs: ENST00000462498.1, ENST00000462790.8, ENST00000477565.3, ENST00000488252.6, ENST00000585679.1, ENST00000588208.6, ENST00000591566.1

Found 302 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCATCTCCCCCAGCTGGCCGGCTCCAGCCACAGAAGCCTTCTCGGTaGTTCTCGAACACTCCCAGGGATCCCAGCCCCAGAGCGTCTGCC +
Preference number: 1 (lower is better)
Translates to: PSPPAGRLQPQKPSR*FSNTPRDPSPRASA
Trigger: GGCAGACGCTCTGGGGCTGGGATCCCTGGGAGTGTTCGAGAAGCACCGAGAAGGCTTCTGTGGCTGGAGCCGGCCAGCTGGGGGAGATGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477565.3
3UTR CCA 90 bp ACACCTCCCACAGCTCACGCTGCACTTGTGCGGTCCTCTCCCATCTaGTCCTGGGCCTGGCCACGTGACTGGCCTCAACGGATGGGCCAC +
Preference number: 1 (lower is better)
Translates to: TPPTAHAALVRSSPI*SWAWPRDWPQRMGH
Trigger: GTGGCCCATCCGTTGAGGCCAGTCACGTGGCCAGGCCCAGGACCAGATGGGAGAGGACCGCACAAGTGCAGCGTGAGCTGTGGGAGGTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488252.6
3UTR TCA 90 bp GCCTGGCCACGTGACTGGCCTCAACGGATGGGCCACCCACAAATGTaGAACCAGCACTCTGCATGGGAGCCGCTCTCCTGGCTCCCAGCC +
Preference number: 1 (lower is better)
Translates to: AWPRDWPQRMGHPQM*NQHSAWEPLSWLPA
Trigger: GGCTGGGAGCCAGGAGAGCGGCTCCCATGCAGAGTGCTGGTTTCACATTTGTGGGTGGCCCATCCGTTGAGGCCAGTCACGTGGCCAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488252.6
3UTR GCA 90 bp GCCGCTCTCCTGGCTCCCAGCCACCAGGAGAAACCCGGGCTGGCCTaGTGGAGAGGCCATGAGGAAAATCTGACCCCTGCTGCCAACAGT +
Preference number: 1 (lower is better)
Translates to: AALLAPSHQEKPGLA*WRGHEENLTPAANS
Trigger: ACTGTTGGCAGCAGGGGTCAGATTTTCCTCATGGCCTCTCCAGCAGGCCAGCCCGGGTTTCTCCTGGTGGCTGGGAGCCAGGAGAGCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488252.6
3UTR GCA 90 bp CCACACTCTCTAAGCGTGGTCAGCCACACCTCCCACAGCTCACGCTaGACTTGTGCGGTCCTCTCCCATCTGGTCCTGGGCCTGGCCACG +
Preference number: 1 (lower is better)
Translates to: PHSLSVVSHTSHSSR*TCAVLSHLVLGLAT
Trigger: CGTGGCCAGGCCCAGGACCAGATGGGAGAGGACCGCACAAGTGCAGCGTGAGCTGTGGGAGGTGTGGCTGACCACGCTTAGAGAGTGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488252.6
3UTR TCA 90 bp TCCCAGCCACCAGGAGAAACCCGGGCTGGCCTGCTGGAGAGGCCATaGGGAAAATCTGACCCCTGCTGCCAACAGTCCTGGCCAAGGGAC +
Preference number: 1 (lower is better)
Translates to: SQPPGETRAGLLERP*GKSDPCCQQSWPRD
Trigger: GTCCCTTGGCCAGGACTGTTGGCAGCAGGGGTCAGATTTTCCTCATGGCCTCTCCAGCAGGCCAGCCCGGGTTTCTCCTGGTGGCTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488252.6
3UTR CCA 90 bp CTCCCATCTGGTCCTGGGCCTGGCCACGTGACTGGCCTCAACGGATaGGCCACCCACAAATGTGAAACCAGCACTCTGCATGGGAGCCGC +
Preference number: 1 (lower is better)
Translates to: LPSGPGPGHVTGLNG*ATHKCETSTLHGSR
Trigger: GCGGCTCCCATGCAGAGTGCTGGTTTCACATTTGTGGGTGGCCCATCCGTTGAGGCCAGTCACGTGGCCAGGCCCAGGACCAGATGGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488252.6
3UTR GCA 90 bp CTGGCCTCAACGGATGGGCCACCCACAAATGTGAAACCAGCACTCTaGATGGGAGCCGCTCTCCTGGCTCCCAGCCACCAGGAGAAACCC +
Preference number: 1 (lower is better)
Translates to: LASTDGPPTNVKPAL*MGAALLAPSHQEKP
Trigger: GGGTTTCTCCTGGTGGCTGGGAGCCAGGAGAGCGGCTCCCATGCAGAGTGCTGGTTTCACATTTGTGGGTGGCCCATCCGTTGAGGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488252.6
3UTR CCA 90 bp GTGGTTAGACAAGCAGGTGCCTGCCTGGCTGCCAAGCGGGCGGGTTaGTTAGTTCAGAGCAGAGAGAGAGGCTCGTGGCTACCCTCGGCA +
Preference number: 1 (lower is better)
Translates to: VVRQAGACLAAKRAG*LVQSRERGSWLPSA
Trigger: TGCCGAGGGTAGCCACGAGCCTCTCTCTCTGCTCTGAACTAACCAACCCGCCCGCTTGGCAGCCAGGCAGGCACCTGCTTGTCTAACCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488252.6
3UTR TCA 90 bp TGCACTTGTGCGGTCCTCTCCCATCTGGTCCTGGGCCTGGCCACGTaGCTGGCCTCAACGGATGGGCCACCCACAAATGTGAAACCAGCA +
Preference number: 1 (lower is better)
Translates to: CTCAVLSHLVLGLAT*LASTDGPPTNVKPA
Trigger: TGCTGGTTTCACATTTGTGGGTGGCCCATCCGTTGAGGCCAGTCACGTGGCCAGGCCCAGGACCAGATGGGAGAGGACCGCACAAGTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488252.6
3UTR GCA 90 bp TGGGCTGACATGGTCCCTGAGCAGCAGGGTGGAACATTCTGGACCTaGAGACACCCCTCCACCTGCCACCTCCGAAATCATCCCACAAGC +
Preference number: 1 (lower is better)
Translates to: WADMVPEQQGGTFWT*RHPSTCHLRNHPTS
Trigger: GCTTGTGGGATGATTTCGGAGGTGGCAGGTGGAGGGGTGTCTGCAGGTCCAGAATGTTCCACCCTGCTGCTCAGGGACCATGTCAGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488252.6
3UTR CCA 90 bp TGCCACCTCCGAAATCATCCCACAAGCCCAGTGAGAAACCCCAAGTaGTTAGACAAGCAGGTGCCTGCCTGGCTGCCAAGCGGGCGGGTT +
Preference number: 1 (lower is better)
Translates to: CHLRNHPTSPVRNPK*LDKQVPAWLPSGRV
Trigger: AACCCGCCCGCTTGGCAGCCAGGCAGGCACCTGCTTGTCTAACCACTTGGGGTTTCTCACTGGGCTTGTGGGATGATTTCGGAGGTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488252.6
3UTR CCA 90 bp GGGCCTATGGCCTGGAAAAGAGAGAGGAAGGTGGTGGAGAGAGAGTaGGAGAGATGGGCTGACATGGTCCCTGAGCAGCAGGGTGGAACA +
Preference number: 1 (lower is better)
Translates to: GPMAWKRERKVVERE*ERWADMVPEQQGGT
Trigger: TGTTCCACCCTGCTGCTCAGGGACCATGTCAGCCCATCTCTCCCACTCTCTCTCCACCACCTTCCTCTCTCTTTTCCAGGCCATAGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488252.6
3UTR CCA 90 bp CTGGGACTAGCATGGGGCCTATGGCCTGGAAAAGAGAGAGGAAGGTaGTGGAGAGAGAGTGGGAGAGATGGGCTGACATGGTCCCTGAGC +
Preference number: 1 (lower is better)
Translates to: LGLAWGLWPGKERGR*WRESGRDGLTWSLS
Trigger: GCTCAGGGACCATGTCAGCCCATCTCTCCCACTCTCTCTCCACCACCTTCCTCTCTCTTTTCCAGGCCATAGGCCCCATGCTAGTCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488252.6
3UTR CCA 90 bp GCCTGGAAAAGAGAGAGGAAGGTGGTGGAGAGAGAGTGGGAGAGATaGGCTGACATGGTCCCTGAGCAGCAGGGTGGAACATTCTGGACC +
Preference number: 1 (lower is better)
Translates to: AWKRERKVVEREWER*ADMVPEQQGGTFWT
Trigger: GGTCCAGAATGTTCCACCCTGCTGCTCAGGGACCATGTCAGCCCATCTCTCCCACTCTCTCTCCACCACCTTCCTCTCTCTTTTCCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488252.6
3UTR TCA 90 bp GCCCAGGGCCAGGCACACAGCAGAGCGCAGGACCTCGGTATTAAGTaGCTGAACTCAGGTTATAGATGCCACAGGACAAGAGGAGGTCAC +
Preference number: 1 (lower is better)
Translates to: AQGQAHSRAQDLGIK*LNSGYRCHRTRGGH
Trigger: GTGACCTCCTCTTGTCCTGTGGCATCTATAACCTGAGTTCAGTCACTTAATACCGAGGTCCTGCGCTCTGCTGTGTGCCTGGCCCTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477565.3
3UTR CCA 90 bp AAGTGCTCTCTGACTGCACACATGAATTCGGCTGCCTCTGGGCTCTaGGGCTACAGCTTGAAAGGCCTACAGAGGCTCTGTCTCCACCTG +
Preference number: 1 (lower is better)
Translates to: KCSLTAHMNSAASGL*GYSLKGLQRLCLHL
Trigger: CAGGTGGAGACAGAGCCTCTGTAGGCCTTTCAAGCTGTAGCCCCAGAGCCCAGAGGCAGCCGAATTCATGTGTGCAGTCAGAGAGCACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488252.6
3UTR TCA 90 bp AGGGCCAGGCACACAGCAGAGCGCAGGACCTCGGTATTAAGTGACTaGACTCAGGTTATAGATGCCACAGGACAAGAGGAGGTCACCAGA +
Preference number: 1 (lower is better)
Translates to: RARHTAERRTSVLSD*TQVIDATGQEEVTR
Trigger: TCTGGTGACCTCCTCTTGTCCTGTGGCATCTATAACCTGAGTTCAGTCACTTAATACCGAGGTCCTGCGCTCTGCTGTGTGCCTGGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477565.3
3UTR TCA 90 bp CTCCAAAGCACATCCGTCACTGTGCCCTGCACCCTCTTGGTCACCTaGGAGCCACCTTTACAGAAAGTAAATGCAGAGACCAGAGAGGGT +
Preference number: 1 (lower is better)
Translates to: LQSTSVTVPCTLLVT*EPPLQKVNAETREG
Trigger: ACCCTCTCTGGTCTCTGCATTTACTTTCTGTAAAGGTGGCTCTCAGGTGACCAAGAGGGTGCAGGGCACAGTGACGGATGTGCTTTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488252.6
3UTR TCA 90 bp CCTGTGGGATTCCTCACCACCCCACATCCAGAGCTAAGCCTGCTATaGACAGGTACTCAGGAAGTATGCATCAACTGCCAGAGGTACTCA +
Preference number: 1 (lower is better)
Translates to: PVGFLTTPHPELSLL*TGTQEVCINCQRYS
Trigger: TGAGTACCTCTGGCAGTTGATGCATACTTCCTGAGTACCTGTTCATAGCAGGCTTAGCTCTGGATGTGGGGTGGTGAGGAATCCCACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488252.6
3UTR GCA 90 bp GTAAACCACTGTTTTGGGATGCTGTGTTATGCAGCAATAGCCGACTaGTCCAAAGCACATCCGTCACTGTGCCCTGCACCCTCTTGGTCA +
Preference number: 1 (lower is better)
Translates to: VNHCFGMLCYAAIAD*SKAHPSLCPAPSWS
Trigger: TGACCAAGAGGGTGCAGGGCACAGTGACGGATGTGCTTTGGAGCAGTCGGCTATTGCTGCATAACACAGCATCCCAAAACAGTGGTTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488252.6
3UTR GCA 90 bp GTTAATTACTGGGGCTGTAAACCACTGTTTTGGGATGCTGTGTTATaGAGCAATAGCCGACTGCTCCAAAGCACATCCGTCACTGTGCCC +
Preference number: 1 (lower is better)
Translates to: VNYWGCKPLFWDAVL*SNSRLLQSTSVTVP
Trigger: GGGCACAGTGACGGATGTGCTTTGGAGCAGTCGGCTATTGCTGCATAACACAGCATCCCAAAACAGTGGTTTACAGCCCCAGTAATTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488252.6
3UTR-3UTR CCA 90 bp CCCTGGCCCCATCTCCCCCAGCTGGCCGGCTCCAGCCACAGAAGCCTTCTCGGTGACGGTCCTTGCAGCTaGGAGTGGCAGTGGGGGCGG +
Preference number: 2 (lower is better)
Translates to: PWPHLPQLAGSSHRSLLGDGPCS*EWQWGR
Trigger: CCGCCCCCACTGCCACTCCCAGCTGCAAGGACCGTC...ACCGAGAAGGCTTCTGTGGCTGGAGCCGGCCAGCTGGGGGAGATGGGGCCAGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000477565.3
3UTR-3UTR GCA 90 bp TCCCTGGCCCCATCTCCCCCAGCTGGCCGGCTCCAGCCACAGAAGCCTTCTCGGCTGAGAGACGGTCCTTaGAGCTGGGAGTGGCAGTGG +
Preference number: 2 (lower is better)
Translates to: SLAPSPPAGRLQPQKPSRLRDGP*SWEWQW
Trigger: CCACTGCCACTCCCAGCTGCAAGGACCGTCTCTCAG...CCGAGAAGGCTTCTGTGGCTGGAGCCGGCCAGCTGGGGGAGATGGGGCCAGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477565.3
3UTR CAA 90 bp CTCTCTAAGCGTGGTCAGCCACACCTCCCACAGCTCACGCTGCACTaGTGCGGTCCTCTCCCATCTGGTCCTGGGCCTGGCCACGTGACT +
Preference number: 2 (lower is better)
Translates to: LSKRGQPHLPQLTLH*CGPLPSGPGPGHVT
Trigger: AGTCACGTGGCCAGGCCCAGGACCAGATGGGAGAGGACCGCACAAGTGCAGCGTGAGCTGTGGGAGGTGTGGCTGACCACGCTTAGAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488252.6
3UTR-3UTR CCA 90 bp TGCCTCTGGGCTCTGGGGCTACAGCTTGAAAGGCCTACAGAGGCTCTGTCTCCACCCCTCGCCCCGGCCTaGTTCCCATACACCCAGCTC +
Preference number: 2 (lower is better)
Translates to: CLWALGLQLERPTEALSPPLAPA*FPYTQL
Trigger: GAGCTGGGTGTATGGGAACCAGGCCGGGGCGAGGGG...TGGAGACAGAGCCTCTGTAGGCCTTTCAAGCTGTAGCCCCAGAGCCCAGAGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000488252.6
3UTR-3UTR GCA 90 bp CCTCTGAGATGCGGCATGAGGCTGGCGGTTCCAGGGAGAGGCGAGGAACTCTGCGTGGGTAATTGCCCATaGCGGGCTCTGCCTGAGAGA +
Preference number: 2 (lower is better)
Translates to: PLRCGMRLAVPGRGEELCVGNCP*RALPER
Trigger: TCTCTCAGGCAGAGCCCGGCATGGGCAATTACCCAC...GCAGAGTTCCTCGCCTCTCCCTGGAACCGCCAGCCTCATGCCGCATCTCAGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488252.6
3UTR-3UTR CCA 90 bp CTTCCTGATGCTCCTGGTAGAACTCCCAGGAAAGGTCGCTCATTGGGTCACGTGCCCTCGGCACTGACCTaGGTTGGCGGAGGCTGGGGG +
Preference number: 2 (lower is better)
Translates to: LPDAPGRTPRKGRSLGHVPSALT*VGGGWG
Trigger: CCCCCAGCCTCCGCCAACCCAGGTCAGTGCCGAGGG...CACGTGACCCAATGAGCGACCTTTCCTGGGAGTTCTACCAGGAGCATCAGGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488252.6
3UTR-3UTR CCA 90 bp GACAATCACAGTGCCTGGCCAATAGGCAGGGGCTCGGTAAGTCCCCAGGGCCCCAGAGATGGGCTGACATaGTCCCTGAGCAGCAGGGTG +
Preference number: 2 (lower is better)
Translates to: DNHSAWPIGRGSVSPQGPRDGLT*SLSSRV
Trigger: CACCCTGCTGCTCAGGGACCATGTCAGCCCATCTCT...GGGGCCCTGGGGACTTACCGAGCCCCTGCCTATTGGCCAGGCACTGTGATTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000488252.6
3UTR-3UTR CCA 90 bp CCTCTGAGATGCGGCATGAGGCTGGCGGTTCCAGGGAGAGGCGAGGAACTCTGCGGTCCCAGAGATAGGTaGGTAATTGCCCATGCCGGG +
Preference number: 2 (lower is better)
Translates to: PLRCGMRLAVPGRGEELCGPRDR*VIAHAG
Trigger: CCCGGCATGGGCAATTACCCACCTATCTCTGGGACC...GCAGAGTTCCTCGCCTCTCCCTGGAACCGCCAGCCTCATGCCGCATCTCAGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488252.6
3UTR-3UTR CCA 90 bp TGCCTCTGGGCTCTGGGGCTACAGCTTGAAAGGCCTACAGAGGCTCTGTCTCCAGCCTGGCCACGTGACTaGCCTCAACGGATGGGCCAC +
Preference number: 2 (lower is better)
Translates to: CLWALGLQLERPTEALSPAWPRD*PQRMGH
Trigger: GTGGCCCATCCGTTGAGGCCAGTCACGTGGCCAGGC...TGGAGACAGAGCCTCTGTAGGCCTTTCAAGCTGTAGCCCCAGAGCCCAGAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488252.6
3UTR-3UTR TCA 90 bp CCTCTGAGATGCGGCATGAGGCTGGCGGTTCCAGGGAGAGGCGAGGAACTCTGCGCCATGAGGAAAATCTaGCCCCTGCTGCCAACAGTC +
Preference number: 2 (lower is better)
Translates to: PLRCGMRLAVPGRGEELCAMRKI*PLLPTV
Trigger: GACTGTTGGCAGCAGGGGTCAGATTTTCCTCATGGC...GCAGAGTTCCTCGCCTCTCCCTGGAACCGCCAGCCTCATGCCGCATCTCAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488252.6
3UTR-3UTR CCA 90 bp ACACCCAGCTCAACCTTCCTGATGCTCCTGGTAGAACTCCCAGGAAAGGTCGCTCCCCTCGCCCCGGCCTaGTTCCCATACACCCAGCTC +
Preference number: 2 (lower is better)
Translates to: TPSSTFLMLLVELPGKVAPLAPA*FPYTQL
Trigger: GAGCTGGGTGTATGGGAACCAGGCCGGGGCGAGGGG...AGCGACCTTTCCTGGGAGTTCTACCAGGAGCATCAGGAAGGTTGAGCTGGGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000462790.8
ENST00000488252.6
ENST00000585679.1
ENST00000588208.6
3UTR CAA 90 bp ACTGCACACATGAATTCGGCTGCCTCTGGGCTCTGGGGCTACAGCTaGAAAGGCCTACAGAGGCTCTGTCTCCACCTGCCTCCCCTCGAC +
Preference number: 2 (lower is better)
Translates to: TAHMNSAASGLWGYS*KGLQRLCLHLPPLD
Trigger: GTCGAGGGGAGGCAGGTGGAGACAGAGCCTCTGTAGGCCTTTCAAGCTGTAGCCCCAGAGCCCAGAGGCAGCCGAATTCATGTGTGCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488252.6
3UTR-3UTR TCA 90 bp CTCAACCTTCCTGATGCTCCTGGTAGAACTCCCAGGAAAGGTCGCTCATTGGGTGGCTACCCTCGGCACTaGCCTGGGTTGGCGGAGGCT +
Preference number: 2 (lower is better)
Translates to: LNLPDAPGRTPRKGRSLGGYPRH*PGLAEA
Trigger: AGCCTCCGCCAACCCAGGTCAGTGCCGAGGGTAGCC...ACCCAATGAGCGACCTTTCCTGGGAGTTCTACCAGGAGCATCAGGAAGGTTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488252.6
3UTR-3UTR CCA 90 bp GTAGATCTGCGAATGTCCAACTCAGCCTGTAGAGAAGGTGCAGTCCAGCCTTCCTGGGTTGGCGGAGGCTaGGGGGCCCCGAGTCTCTTC +
Preference number: 2 (lower is better)
Translates to: VDLRMSNSACREGAVQPSWVGGG*GAPSLF
Trigger: GAAGAGACTCGGGGCCCCCCAGCCTCCGCCAACCCA...GGAAGGCTGGACTGCACCTTCTCTACAGGCTGAGTTGGACATTCGCAGATCTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000462790.8
ENST00000488252.6
3UTR-3UTR CCA 90 bp ACCGAGGACAATCACAGTGCCTGGCCAATAGGCAGGGGCTCGGTAAGTCCCCAGTGCCCTGCACCCTCTTaGTCACCTGAGAGCCACCTT +
Preference number: 2 (lower is better)
Translates to: TEDNHSAWPIGRGSVSPQCPAPS*SPESHL
Trigger: AAGGTGGCTCTCAGGTGACCAAGAGGGTGCAGGGCA...CTGGGGACTTACCGAGCCCCTGCCTATTGGCCAGGCACTGTGATTGTCCTCGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488252.6
3UTR-3UTR CCA 90 bp ACTCTGCAGGGACAAACGTGGATGAGACACAGAGCAATCCTGCCGGGCAGCAGCATCTGGTCCTGGGCCTaGCCACGTGACTGGCCTCAA +
Preference number: 2 (lower is better)
Translates to: TLQGQTWMRHRAILPGSSIWSWA*PRDWPQ
Trigger: TTGAGGCCAGTCACGTGGCCAGGCCCAGGACCAGAT...GCTGCTGCCCGGCAGGATTGCTCTGTGTCTCATCCACGTTTGTCCCTGCAGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488252.6
3UTR-3UTR GCA 90 bp CCTGATGCTCCTGGTAGAACTCCCAGGAAAGGTCGCTCATTGGGTCACGTGTCCGCCTGGGGTGGGCGTTaGTGCTTGAGGCAGAATGCA +
Preference number: 2 (lower is better)
Translates to: PDAPGRTPRKGRSLGHVSAWGGR*CLRQNA
Trigger: TGCATTCTGCCTCAAGCAGCAACGCCCACCCCAGGC...GGACACGTGACCCAATGAGCGACCTTTCCTGGGAGTTCTACCAGGAGCATCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462790.8
ENST00000488252.6
ENST00000585679.1
3UTR-3UTR CCA 90 bp TTCCCATACACCCAGCTCAACCTTCCTGATGCTCCTGGTAGAACTCCCAGGAAATGGGTTGGCGGAGGCTaGGGGGCCCCGAGTCTCTTC +
Preference number: 2 (lower is better)
Translates to: FPYTQLNLPDAPGRTPRKWVGGG*GAPSLF
Trigger: GAAGAGACTCGGGGCCCCCCAGCCTCCGCCAACCCA...TTTCCTGGGAGTTCTACCAGGAGCATCAGGAAGGTTGAGCTGGGTGTATGGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000462790.8
ENST00000488252.6
ENST00000588208.6
3UTR-3UTR TCA 90 bp CCACATCCACCACTGGAACTAGGGGTGGCTTCTCCATGTGGCCTGAGCCTGGGGACCCTCTTGGTCACCTaGGAGCCACCTTTACAGAAA +
Preference number: 2 (lower is better)
Translates to: PHPPLELGVASPCGLSLGTLLVT*EPPLQK
Trigger: TTTCTGTAAAGGTGGCTCTCAGGTGACCAAGAGGGT...CCCCAGGCTCAGGCCACATGGAGAAGCCACCCCTAGTTCCAGTGGTGGATGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488252.6
3UTR-3UTR TCA 90 bp CCAACTCAGCCTGTAGAGAAGGTGCAGTCCAGCCTTCCTTATCCAGATGAAGAAACTGGGCTGGGCTGCTaGCCCACTCAGGCAGCCCCT +
Preference number: 2 (lower is better)
Translates to: PTQPVEKVQSSLPYPDEETGLGC*PTQAAP
Trigger: AGGGGCTGCCTGAGTGGGTCAGCAGCCCAGCCCAGT...TTCTTCATCTGGATAAGGAAGGCTGGACTGCACCTTCTCTACAGGCTGAGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488252.6
3UTR-3UTR CCA 90 bp AACTCCCAGGAAAGGTCGCTCATTGGGTCACGTGTCCATCTCAAACCAATCACTTGGGTTGGCGGAGGCTaGGGGGCCCCGAGTCTCTTC +
Preference number: 2 (lower is better)
Translates to: NSQERSLIGSRVHLKPITWVGGG*GAPSLF
Trigger: GAAGAGACTCGGGGCCCCCCAGCCTCCGCCAACCCA...AGTGATTGGTTTGAGATGGACACGTGACCCAATGAGCGACCTTTCCTGGGAGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000462790.8
ENST00000488252.6
ENST00000588208.6
3UTR-3UTR CCA 90 bp CCACATCCACCACTGGAACTAGGGGTGGCTTCTCCATGTGGCCTGAGCCTGGGGAGTGTCAGGTACAGTTaGATCCAGGGCTCCACACAA +
Preference number: 2 (lower is better)
Translates to: PHPPLELGVASPCGLSLGSVRYS*IQGSTQ
Trigger: TTGTGTGGAGCCCTGGATCCAACTGTACCTGACACT...CCCCAGGCTCAGGCCACATGGAGAAGCCACCCCTAGTTCCAGTGGTGGATGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462790.8
ENST00000488252.6
ENST00000585679.1
3UTR-3UTR CCA 90 bp ATCCCAGCCCCAGAGCGTCTGCCCTCACCACTGCCCCACATGGAACTCCGTCTGTCTGCCATGTTTACCTaGTTGTCGTATGTCTCCTTG +
Preference number: 2 (lower is better)
Translates to: IPAPERLPSPLPHMELRLSAMFT*LSYVSL
Trigger: CAAGGAGACATACGACAACCAGGTAAACATGGCAGA...CAGACGGAGTTCCATGTGGGGCAGTGGTGAGGGCAGACGCTCTGGGGCTGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477565.3
3UTR-3UTR GCA 90 bp TTCCTGATGCTCCTGGTAGAACTCCCAGGAAAGGTCGCTCATTGGGTCACGTGTTGGGGTGGGCGTTGCTaGTTGAGGCAGAATGCAGGT +
Preference number: 2 (lower is better)
Translates to: FLMLLVELPGKVAHWVTCWGGRC*LRQNAG
Trigger: ACCTGCATTCTGCCTCAAGCAGCAACGCCCACCCCA...ACACGTGACCCAATGAGCGACCTTTCCTGGGAGTTCTACCAGGAGCATCAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462790.8
ENST00000488252.6
ENST00000585679.1
3UTR-3UTR GCA 90 bp CTGCCTGCGTCTGCCCATCACAGATATAGAATGGTGACACATCAGATCTTTCCTAGACAAGCAGGTGCCTaGCTGGCTGCCAAGCGGGCG +
Preference number: 2 (lower is better)
Translates to: LPASAHHRYRMVTHQIFPRQAGA*LAAKRA
Trigger: CGCCCGCTTGGCAGCCAGGCAGGCACCTGCTTGTCT...AGGAAAGATCTGATGTGTCACCATTCTATATCTGTGATGGGCAGACGCAGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488252.6
3UTR-3UTR GCA 90 bp GATAATCGCTTGAACCTGACAGGCAGAGGTTACACTGAACCGAGATCGCACCACAGGGCCCCTTTGACCTaGCTGCGTCTGCCCATCACA +
Preference number: 2 (lower is better)
Translates to: DNRLNLTGRGYTEPRSHHRAPLT*LRLPIT
Trigger: TGTGATGGGCAGACGCAGGCAGGTCAAAGGGGCCCT...GTGGTGCGATCTCGGTTCAGTGTAACCTCTGCCTGTCAGGTTCAAGCGATTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488252.6
3UTR-3UTR CCA 90 bp GCCTGTGGGATTCCTCACCACCCCACATCCAGAGCTAAGCCTGCTATGAACAGGTCTCTGGGACTAGCATaGGGCCTATGGCCTGGAAAA +
Preference number: 2 (lower is better)
Translates to: ACGIPHHPTSRAKPAMNRSLGLA*GLWPGK
Trigger: TTTTCCAGGCCATAGGCCCCATGCTAGTCCCAGAGA...CCTGTTCATAGCAGGCTTAGCTCTGGATGTGGGGTGGTGAGGAATCCCACAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488252.6
3UTR-3UTR CCA 90 bp TTCCCATACACCCAGCTCAACCTTCCTGATGCTCCTGGTAGAACTCCCAGGAAACAATCACTAGGAACCTaGGTTGGCGGAGGCTGGGGG +
Preference number: 2 (lower is better)
Translates to: FPYTQLNLPDAPGRTPRKQSLGT*VGGGWG
Trigger: CCCCCAGCCTCCGCCAACCCAGGTTCCTAGTGATTG...TTTCCTGGGAGTTCTACCAGGAGCATCAGGAAGGTTGAGCTGGGTGTATGGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588208.6
3UTR-3UTR GCA 90 bp CGAATGTCCAACTCAGCCTGTAGAGAAGGTGCAGTCCAGCCTTCCTTATCCAGATGGGGTGGGCGTTGCTaGTTGAGGCAGAATGCAGGT +
Preference number: 2 (lower is better)
Translates to: RMSNSACREGAVQPSLSRWGGRC*LRQNAG
Trigger: ACCTGCATTCTGCCTCAAGCAGCAACGCCCACCCCA...TCTGGATAAGGAAGGCTGGACTGCACCTTCTCTACAGGCTGAGTTGGACATTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462790.8
ENST00000488252.6
ENST00000585679.1
3UTR-3UTR GCA 90 bp GATAATCGCTTGAACCTGACAGGCAGAGGTTACACTGAACCGAGATCGCACCACGGAACATTCTGGACCTaGAGACACCCCTCCACCTGC +
Preference number: 2 (lower is better)
Translates to: DNRLNLTGRGYTEPRSHHGTFWT*RHPSTC
Trigger: GCAGGTGGAGGGGTGTCTGCAGGTCCAGAATGTTCC...GTGGTGCGATCTCGGTTCAGTGTAACCTCTGCCTGTCAGGTTCAAGCGATTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488252.6
3UTR-3UTR CCA 90 bp AACTCCCAGGAAAGGTCGCTCATTGGGTCACGTGTCCATCTCAAACCAATCACTCAAGGGAGCTCTGATTaGCCAGGCCGAGGTGCCACA +
Preference number: 2 (lower is better)
Translates to: NSQERSLIGSRVHLKPITQGSSD*PGRGAT
Trigger: TGTGGCACCTCGGCCTGGCCAATCAGAGCTCCCTTG...AGTGATTGGTTTGAGATGGACACGTGACCCAATGAGCGACCTTTCCTGGGAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462790.8
ENST00000488252.6
ENST00000585679.1
3UTR-3UTR CCA 90 bp GAAACTGAAGAAATGAAATTGGCTAGTGTCAGGTACAGTTGGATCCAGGGCTCCAAGCAGGTGCCTGCCTaGCTGCCAAGCGGGCGGGTT +
Preference number: 2 (lower is better)
Translates to: ETEEMKLASVRYSWIQGSKQVPA*LPSGRV
Trigger: AACCCGCCCGCTTGGCAGCCAGGCAGGCACCTGCTT...GGAGCCCTGGATCCAACTGTACCTGACACTAGCCAATTTCATTTCTTCAGTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488252.6
3UTR-3UTR CCA 90 bp ACACCCAGCTCAACCTTCCTGATGCTCCTGGTAGAACTCCCAGGAAAGGTCGCTGTGAGAAACCCCAAGTaGTTAGACAAGCAGGTGCCT +
Preference number: 2 (lower is better)
Translates to: TPSSTFLMLLVELPGKVAVRNPK*LDKQVP
Trigger: AGGCACCTGCTTGTCTAACCACTTGGGGTTTCTCAC...AGCGACCTTTCCTGGGAGTTCTACCAGGAGCATCAGGAAGGTTGAGCTGGGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488252.6
3UTR-3UTR CCA 90 bp GTCCATGAAACTGAAGAAATGAAATTGGCTAGTGTCAGGTACAGTTGGATCCAGGTGAAACCCCGTCTCTaGGTTGGCGGAGGCTGGGGG +
Preference number: 2 (lower is better)
Translates to: VHETEEMKLASVRYSWIQVKPRL*VGGGWG
Trigger: CCCCCAGCCTCCGCCAACCCAGAGACGGGGTTTCAC...CTGGATCCAACTGTACCTGACACTAGCCAATTTCATTTCTTCAGTTTCATGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462790.8
3UTR-3UTR CCA 90 bp CATACACCCAGCTCAACCTTCCTGATGCTCCTGGTAGAACTCCCAGGAAAGGTCAGGCAGAATGCAGGTTaGGAGGGTAGATCTGCGAAT +
Preference number: 2 (lower is better)
Translates to: HTPSSTFLMLLVELPGKVRQNAG*EGRSAN
Trigger: ATTCGCAGATCTACCCTCCCAACCTGCATTCTGCCT...GACCTTTCCTGGGAGTTCTACCAGGAGCATCAGGAAGGTTGAGCTGGGTGTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462790.8
ENST00000488252.6
ENST00000585679.1
3UTR CAA 90 bp AACCTTCCTGATGCTCCTGGTAGAACTCCCAGGAAAGGTCGCTCATaGGGTCACGTGTCCATCTCAAACCAATCACTAGGAACCTGGGTT +
Preference number: 2 (lower is better)
Translates to: NLPDAPGRTPRKGRS*GHVSISNQSLGTWV
Trigger: AACCCAGGTTCCTAGTGATTGGTTTGAGATGGACACGTGACCCAATGAGCGACCTTTCCTGGGAGTTCTACCAGGAGCATCAGGAAGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588208.6
3UTR-3UTR TCA 90 bp TGTCGTATGTCTCCTTGTGAGCCTGTCTGTCTCGGTCACTGCTATGTCCCCAGTGACCTCGGTATTAAGTaGCTGAACTCAGGTTATAGA +
Preference number: 2 (lower is better)
Translates to: CRMSPCEPVCLGHCYVPSDLGIK*LNSGYR
Trigger: TCTATAACCTGAGTTCAGTCACTTAATACCGAGGTC...ACTGGGGACATAGCAGTGACCGAGACAGACAGGCTCACAAGGAGACATACGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477565.3
3UTR-3UTR TCA 90 bp ACACCCAGCTCAACCTTCCTGATGCTCCTGGTAGAACTCCCAGGAAAGGTCGCTATGAAACTGAAGAAATaGAATTGGCTAGTGTCAGGT +
Preference number: 2 (lower is better)
Translates to: TPSSTFLMLLVELPGKVAMKLKK*NWLVSG
Trigger: ACCTGACACTAGCCAATTTCATTTCTTCAGTTTCAT...AGCGACCTTTCCTGGGAGTTCTACCAGGAGCATCAGGAAGGTTGAGCTGGGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462790.8
ENST00000488252.6
ENST00000585679.1
ENST00000588208.6
3UTR TCA 72 bp CCGGGCTGGCCTGCTGGAGAGGCCATGAGGAAAATCTaGCCCCTGCTGCCAACAGTCCTGGCCAAGGGACCC +
Preference number: 3 (lower is better)
Translates to: PGWPAGEAMRKI*PLLPTVLAKGP
Trigger: GGGTCCCTTGGCCAGGACTGTTGGCAGCAGGGGTCAGATTTTCCTCATGGCCTCTCCAGCAGGCCAGCCCGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488252.6
3UTR GCA 72 bp CTCGAACACTCCCAGGGATCCCAGCCCCAGAGCGTCTaGCCTCACCACTGCCCCACATGGAACTCCGTCTGC +
Preference number: 3 (lower is better)
Translates to: LEHSQGSQPQSV*PHHCPTWNSVC
Trigger: GCAGACGGAGTTCCATGTGGGGCAGTGGTGAGGGCAGACGCTCTGGGGCTGGGATCCCTGGGAGTGTTCGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477565.3
3UTR GCA 72 bp CCAGCTGGCCGGCTCCAGCCACAGAAGCCTTCTCGGTaGTTCTCGAACACTCCCAGGGATCCCAGCCCCAGA +
Preference number: 3 (lower is better)
Translates to: PAGRLQPQKPSR*FSNTPRDPSPR
Trigger: TCTGGGGCTGGGATCCCTGGGAGTGTTCGAGAAGCACCGAGAAGGCTTCTGTGGCTGGAGCCGGCCAGCTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477565.3
3UTR CCA 72 bp ACAGCTCACGCTGCACTTGTGCGGTCCTCTCCCATCTaGTCCTGGGCCTGGCCACGTGACTGGCCTCAACGG +
Preference number: 3 (lower is better)
Translates to: TAHAALVRSSPI*SWAWPRDWPQR
Trigger: CCGTTGAGGCCAGTCACGTGGCCAGGCCCAGGACCAGATGGGAGAGGACCGCACAAGTGCAGCGTGAGCTGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488252.6
3UTR GCA 72 bp CTAAGCGTGGTCAGCCACACCTCCCACAGCTCACGCTaGACTTGTGCGGTCCTCTCCCATCTGGTCCTGGGC +
Preference number: 3 (lower is better)
Translates to: LSVVSHTSHSSR*TCAVLSHLVLG
Trigger: GCCCAGGACCAGATGGGAGAGGACCGCACAAGTGCAGCGTGAGCTGTGGGAGGTGTGGCTGACCACGCTTAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488252.6
3UTR CCA 72 bp GCGGGTTGGTTAGTTCAGAGCAGAGAGAGAGGCTCGTaGCTACCCTCGGCACTGACCTGGGTTGGCGGAGGC +
Preference number: 3 (lower is better)
Translates to: AGWLVQSRERGS*LPSALTWVGGG
Trigger: GCCTCCGCCAACCCAGGTCAGTGCCGAGGGTAGCCACGAGCCTCTCTCTCTGCTCTGAACTAACCAACCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488252.6
3UTR-3UTR CAA 90 bp TCCCTGGCCCCATCTCCCCCAGCTGGCCGGCTCCAGCCACAGAAGCCTTCTCGGGCATCTGACATGCTCTaGTCTGCCATGTTTACCTGG +
Preference number: 3 (lower is better)
Translates to: SLAPSPPAGRLQPQKPSRASDML*SAMFTW
Trigger: CCAGGTAAACATGGCAGACAAGAGCATGTCAGATGC...CCGAGAAGGCTTCTGTGGCTGGAGCCGGCCAGCTGGGGGAGATGGGGCCAGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477565.3
3UTR TCA 72 bp GGGAGAGGCGAGGAACTCTGCAGGGACAAACGTGGATaGGACACAGAGCAATCCTGCCGGGCAGCAGCAGCG +
Preference number: 3 (lower is better)
Translates to: GRGEELCRDKRG*DTEQSCRAAAA
Trigger: CGCTGCTGCTGCCCGGCAGGATTGCTCTGTGTCTCATCCACGTTTGTCCCTGCAGAGTTCCTCGCCTCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488252.6
3UTR GCA 72 bp ACGGATGGGCCACCCACAAATGTGAAACCAGCACTCTaGATGGGAGCCGCTCTCCTGGCTCCCAGCCACCAG +
Preference number: 3 (lower is better)
Translates to: TDGPPTNVKPAL*MGAALLAPSHQ
Trigger: CTGGTGGCTGGGAGCCAGGAGAGCGGCTCCCATGCAGAGTGCTGGTTTCACATTTGTGGGTGGCCCATCCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488252.6
3UTR CCA 72 bp CAAGCAGGTGCCTGCCTGGCTGCCAAGCGGGCGGGTTaGTTAGTTCAGAGCAGAGAGAGAGGCTCGTGGCTA +
Preference number: 3 (lower is better)
Translates to: QAGACLAAKRAG*LVQSRERGSWL
Trigger: TAGCCACGAGCCTCTCTCTCTGCTCTGAACTAACCAACCCGCCCGCTTGGCAGCCAGGCAGGCACCTGCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488252.6
3UTR TCA 72 bp CGTGACTGGCCTCAACGGATGGGCCACCCACAAATGTaGAACCAGCACTCTGCATGGGAGCCGCTCTCCTGG +
Preference number: 3 (lower is better)
Translates to: RDWPQRMGHPQM*NQHSAWEPLSW
Trigger: CCAGGAGAGCGGCTCCCATGCAGAGTGCTGGTTTCACATTTGTGGGTGGCCCATCCGTTGAGGCCAGTCACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488252.6
3UTR GCA 72 bp GGCTTCCATGGCACATGGCACCGAGGACAATCACAGTaGCTGGCCAATAGGCAGGGGCTCGGTAAGTCCCCA +
Preference number: 3 (lower is better)
Translates to: GFHGTWHRGQSQ*LANRQGLGKSP
Trigger: TGGGGACTTACCGAGCCCCTGCCTATTGGCCAGGCACTGTGATTGTCCTCGGTGCCATGTGCCATGGAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488252.6
3UTR-3UTR CAA 90 bp TGCCTCTGGGCTCTGGGGCTACAGCTTGAAAGGCCTACAGAGGCTCTGTCTCCAGGTGGGCGTTGCTGCTaGAGGCAGAATGCAGGTTGG +
Preference number: 3 (lower is better)
Translates to: CLWALGLQLERPTEALSPGGRCC*RQNAGW
Trigger: CCAACCTGCATTCTGCCTCAAGCAGCAACGCCCACC...TGGAGACAGAGCCTCTGTAGGCCTTTCAAGCTGTAGCCCCAGAGCCCAGAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488252.6
3UTR-3UTR CAA 90 bp CCACATCCACCACTGGAACTAGGGGTGGCTTCTCCATGTGGCCTGAGCCTGGGGGTACTCAGTAAATGCTaGCTGCCTGTGGTGTCCAGT +
Preference number: 3 (lower is better)
Translates to: PHPPLELGVASPCGLSLGVLSKC*LPVVSS
Trigger: ACTGGACACCACAGGCAGCAAGCATTTACTGAGTAC...CCCCAGGCTCAGGCCACATGGAGAAGCCACCCCTAGTTCCAGTGGTGGATGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488252.6
3UTR GCA 72 bp GGTGGAACATTCTGGACCTGCAGACACCCCTCCACCTaGCACCTCCGAAATCATCCCACAAGCCCAGTGAGA +
Preference number: 3 (lower is better)
Translates to: GGTFWTCRHPST*HLRNHPTSPVR
Trigger: TCTCACTGGGCTTGTGGGATGATTTCGGAGGTGGCAGGTGGAGGGGTGTCTGCAGGTCCAGAATGTTCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488252.6
3UTR GCA 72 bp ATGGTCCCTGAGCAGCAGGGTGGAACATTCTGGACCTaGAGACACCCCTCCACCTGCCACCTCCGAAATCAT +
Preference number: 3 (lower is better)
Translates to: MVPEQQGGTFWT*RHPSTCHLRNH
Trigger: ATGATTTCGGAGGTGGCAGGTGGAGGGGTGTCTGCAGGTCCAGAATGTTCCACCCTGCTGCTCAGGGACCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488252.6
3UTR CCA 72 bp TGGGGTGGGCGTTGCTGCTTGAGGCAGAATGCAGGTTaGGAGGGTAGATCTGCGAATGTCCAACTCAGCCTG +
Preference number: 3 (lower is better)
Translates to: WGGRCCLRQNAG*EGRSANVQLSL
Trigger: CAGGCTGAGTTGGACATTCGCAGATCTACCCTCCCAACCTGCATTCTGCCTCAAGCAGCAACGCCCACCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462790.8
ENST00000488252.6
ENST00000585679.1
3UTR CCA 72 bp AGGTGGTGGAGAGAGAGTGGGAGAGATGGGCTGACATaGTCCCTGAGCAGCAGGGTGGAACATTCTGGACCT +
Preference number: 3 (lower is better)
Translates to: RWWRESGRDGLT*SLSSRVEHSGP
Trigger: AGGTCCAGAATGTTCCACCCTGCTGCTCAGGGACCATGTCAGCCCATCTCTCCCACTCTCTCTCCACCACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488252.6
3UTR CCA 72 bp AGAGAGAGGAAGGTGGTGGAGAGAGAGTGGGAGAGATaGGCTGACATGGTCCCTGAGCAGCAGGGTGGAACA +
Preference number: 3 (lower is better)
Translates to: RERKVVEREWER*ADMVPEQQGGT
Trigger: TGTTCCACCCTGCTGCTCAGGGACCATGTCAGCCCATCTCTCCCACTCTCTCTCCACCACCTTCCTCTCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488252.6
3UTR CCA 72 bp GCCTGGAAAAGAGAGAGGAAGGTGGTGGAGAGAGAGTaGGAGAGATGGGCTGACATGGTCCCTGAGCAGCAG +
Preference number: 3 (lower is better)
Translates to: AWKRERKVVERE*ERWADMVPEQQ
Trigger: CTGCTGCTCAGGGACCATGTCAGCCCATCTCTCCCACTCTCTCTCCACCACCTTCCTCTCTCTTTTCCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488252.6
3UTR CCA 72 bp GCATGGGGCCTATGGCCTGGAAAAGAGAGAGGAAGGTaGTGGAGAGAGAGTGGGAGAGATGGGCTGACATGG +
Preference number: 3 (lower is better)
Translates to: AWGLWPGKERGR*WRESGRDGLTW
Trigger: CCATGTCAGCCCATCTCTCCCACTCTCTCTCCACCACCTTCCTCTCTCTTTTCCAGGCCATAGGCCCCATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488252.6
3UTR-3UTR CAA 90 bp ATGCTCCTGGTAGAACTCCCAGGAAAGGTCGCTCATTGGGTCACGTGTCCATCTGGTGGGCGTTGCTGCTaGAGGCAGAATGCAGGTTGG +
Preference number: 3 (lower is better)
Translates to: MLLVELPGKVAHWVTCPSGGRCC*RQNAGW
Trigger: CCAACCTGCATTCTGCCTCAAGCAGCAACGCCCACC...AGATGGACACGTGACCCAATGAGCGACCTTTCCTGGGAGTTCTACCAGGAGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462790.8
ENST00000488252.6
ENST00000585679.1
3UTR CCA 72 bp CGAAATCATCCCACAAGCCCAGTGAGAAACCCCAAGTaGTTAGACAAGCAGGTGCCTGCCTGGCTGCCAAGC +
Preference number: 3 (lower is better)
Translates to: RNHPTSPVRNPK*LDKQVPAWLPS
Trigger: GCTTGGCAGCCAGGCAGGCACCTGCTTGTCTAACCACTTGGGGTTTCTCACTGGGCTTGTGGGATGATTTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488252.6
3UTR CCA 72 bp CTGACTGCACACATGAATTCGGCTGCCTCTGGGCTCTaGGGCTACAGCTTGAAAGGCCTACAGAGGCTCTGT +
Preference number: 3 (lower is better)
Translates to: LTAHMNSAASGL*GYSLKGLQRLC
Trigger: ACAGAGCCTCTGTAGGCCTTTCAAGCTGTAGCCCCAGAGCCCAGAGGCAGCCGAATTCATGTGTGCAGTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488252.6
3UTR TCA 72 bp CTAGGAGGGGCCCCGCAGTGTTCTTCACAGCGCATCTaGCATGCTCTTGTCTGCCATGTTTACCTGGTTGTC +
Preference number: 3 (lower is better)
Translates to: LGGAPQCSSQRI*HALVCHVYLVV
Trigger: GACAACCAGGTAAACATGGCAGACAAGAGCATGTCAGATGCGCTGTGAAGAACACTGCGGGGCCCCTCCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477565.3
3UTR GCA 72 bp AGGGGCCCCGCAGTGTTCTTCACAGCGCATCTGACATaGTCTTGTCTGCCATGTTTACCTGGTTGTCGTATG +
Preference number: 3 (lower is better)
Translates to: RGPAVFFTAHLT*SCLPCLPGCRM
Trigger: CATACGACAACCAGGTAAACATGGCAGACAAGAGCATGTCAGATGCGCTGTGAAGAACACTGCGGGGCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477565.3
3UTR GCA 72 bp TGTTTTGGGATGCTGTGTTATGCAGCAATAGCCGACTaGTCCAAAGCACATCCGTCACTGTGCCCTGCACCC +
Preference number: 3 (lower is better)
Translates to: CFGMLCYAAIAD*SKAHPSLCPAP
Trigger: GGGTGCAGGGCACAGTGACGGATGTGCTTTGGAGCAGTCGGCTATTGCTGCATAACACAGCATCCCAAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488252.6
3UTR-3UTR CAA 90 bp CCACATCCACCACTGGAACTAGGGGTGGCTTCTCCATGTGGCCTGAGCCTGGGGACTGAAGAAATGAAATaGGCTAGTGTCAGGTACAGT +
Preference number: 3 (lower is better)
Translates to: PHPPLELGVASPCGLSLGTEEMK*ASVRYS
Trigger: ACTGTACCTGACACTAGCCAATTTCATTTCTTCAGT...CCCCAGGCTCAGGCCACATGGAGAAGCCACCCCTAGTTCCAGTGGTGGATGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462790.8
ENST00000488252.6
ENST00000585679.1
3UTR-3UTR CAA 90 bp CATCTGACATGCTCTTGTCTGCCATGTTTACCTGGTTGTCGTATGTCTCCTTGTGCTGAGAGACGGTCCTaGCAGCTGGGAGTGGCAGTG +
Preference number: 3 (lower is better)
Translates to: HLTCSCLPCLPGCRMSPCAERRS*QLGVAV
Trigger: CACTGCCACTCCCAGCTGCAAGGACCGTCTCTCAGC...ACAAGGAGACATACGACAACCAGGTAAACATGGCAGACAAGAGCATGTCAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477565.3
3UTR TCA 72 bp ACATCCGTCACTGTGCCCTGCACCCTCTTGGTCACCTaGGAGCCACCTTTACAGAAAGTAAATGCAGAGACC +
Preference number: 3 (lower is better)
Translates to: TSVTVPCTLLVT*EPPLQKVNAET
Trigger: GGTCTCTGCATTTACTTTCTGTAAAGGTGGCTCTCAGGTGACCAAGAGGGTGCAGGGCACAGTGACGGATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488252.6
3UTR-3UTR CAA 90 bp CTGCCTGCGTCTGCCCATCACAGATATAGAATGGTGACACATCAGATCTTTCCTTGCCAAGCGGGCGGGTaGGTTAGTTCAGAGCAGAGA +
Preference number: 3 (lower is better)
Translates to: LPASAHHRYRMVTHQIFPCQAGG*VSSEQR
Trigger: TCTCTGCTCTGAACTAACCAACCCGCCCGCTTGGCA...AGGAAAGATCTGATGTGTCACCATTCTATATCTGTGATGGGCAGACGCAGGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488252.6
3UTR TCA 72 bp CACACAGCAGAGCGCAGGACCTCGGTATTAAGTGACTaGACTCAGGTTATAGATGCCACAGGACAAGAGGAG +
Preference number: 3 (lower is better)
Translates to: HTAERRTSVLSD*TQVIDATGQEE
Trigger: CTCCTCTTGTCCTGTGGCATCTATAACCTGAGTTCAGTCACTTAATACCGAGGTCCTGCGCTCTGCTGTGTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477565.3
3UTR TCA 72 bp CAGGCACACAGCAGAGCGCAGGACCTCGGTATTAAGTaGCTGAACTCAGGTTATAGATGCCACAGGACAAGA +
Preference number: 3 (lower is better)
Translates to: QAHSRAQDLGIK*LNSGYRCHRTR
Trigger: TCTTGTCCTGTGGCATCTATAACCTGAGTTCAGTCACTTAATACCGAGGTCCTGCGCTCTGCTGTGTGCCTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477565.3
3UTR TCA 72 bp AATGCTTGCTGCCTGTGGTGTCCAGTAAGCGCTCACTaGTTGACTACAGTGCCCACTAAGTGCTCTCTGACT +
Preference number: 3 (lower is better)
Translates to: NACCLWCPVSAH*LTTVPTKCSLT
Trigger: AGTCAGAGAGCACTTAGTGGGCACTGTAGTCAATCAGTGAGCGCTTACTGGACACCACAGGCAGCAAGCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488252.6
3UTR TCA 72 bp TTCCTCACCACCCCACATCCAGAGCTAAGCCTGCTATaGACAGGTACTCAGGAAGTATGCATCAACTGCCAG +
Preference number: 3 (lower is better)
Translates to: FLTTPHPELSLL*TGTQEVCINCQ
Trigger: CTGGCAGTTGATGCATACTTCCTGAGTACCTGTTCATAGCAGGCTTAGCTCTGGATGTGGGGTGGTGAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488252.6
3UTR GCA 72 bp TGGGGCTGTAAACCACTGTTTTGGGATGCTGTGTTATaGAGCAATAGCCGACTGCTCCAAAGCACATCCGTC +
Preference number: 3 (lower is better)
Translates to: WGCKPLFWDAVL*SNSRLLQSTSV
Trigger: GACGGATGTGCTTTGGAGCAGTCGGCTATTGCTGCATAACACAGCATCCCAAAACAGTGGTTTACAGCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488252.6
CDS-3UTR TCA 90 bp TCCCTGGCCCCATCTCCCCCAGCTGGCCGGCTCCAGCCACAGAAGCCTTCTCGGCTAAGCCTTCCCTGCTaGAACCGGACGCCGCACGGC +
Preference number: 4 (lower is better)
Translates to: SLAPSPPAGRLQPQKPSRLSLPC*NRTPHG
Trigger: GCCGTGCGGCGTCCGGTTTCAGCAGGGAAGGCTTAG...CCGAGAAGGCTTCTGTGGCTGGAGCCGGCCAGCTGGGGGAGATGGGGCCAGGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477565.3
CDS-3UTR GCA 90 bp CCCTGGCCCCATCTCCCCCAGCTGGCCGGCTCCAGCCACAGAAGCCTTCTCGGTACAGGGAGAGGCCCCTaGCATCTCCCTGGCCCCATC +
Preference number: 4 (lower is better)
Translates to: PWPHLPQLAGSSHRSLLGTGRGP*HLPGPI
Trigger: GATGGGGCCAGGGAGATGGCAGGGGCCTCTCCCTGT...ACCGAGAAGGCTTCTGTGGCTGGAGCCGGCCAGCTGGGGGAGATGGGGCCAGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000477565.3
CDS-3UTR GCA 90 bp TCCCTGGCCCCATCTCCCCCAGCTGGCCGGCTCCAGCCACAGAAGCCTTCTCGGGTCTGCCCTCACCACTaGCCCACATGGAACTCCGTC +
Preference number: 4 (lower is better)
Translates to: SLAPSPPAGRLQPQKPSRVCPHH*PTWNSV
Trigger: GACGGAGTTCCATGTGGGGCAGTGGTGAGGGCAGAC...CCGAGAAGGCTTCTGTGGCTGGAGCCGGCCAGCTGGGGGAGATGGGGCCAGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477565.3
CDS-3UTR CCA 90 bp TCCCTGGCCCCATCTCCCCCAGCTGGCCGGCTCCAGCCACAGAAGCCTTCTCGGGTACAGGGCCACGGATaGCTCGTTGGCCAGGACGTA +
Preference number: 4 (lower is better)
Translates to: SLAPSPPAGRLQPQKPSRVQGHG*LVGQDV
Trigger: TACGTCCTGGCCAACGAGCCATCCGTGGCCCTGTAC...CCGAGAAGGCTTCTGTGGCTGGAGCCGGCCAGCTGGGGGAGATGGGGCCAGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477565.3
CDS-3UTR CCA 90 bp TGTGAGCCTGTCTGTCTCGGTCACTGCTATGTCCCCAGTGCCCAGCCCAGGGCCGACGGTCCTTGCAGCTaGGAGTGGCAGTGGGGGCGG +
Preference number: 4 (lower is better)
Translates to: CEPVCLGHCYVPSAQPRADGPCS*EWQWGR
Trigger: CCGCCCCCACTGCCACTCCCAGCTGCAAGGACCGTC...GGCCCTGGGCTGGGCACTGGGGACATAGCAGTGACCGAGACAGACAGGCTCACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477565.3
3UTR CAA 72 bp CGTGGTCAGCCACACCTCCCACAGCTCACGCTGCACTaGTGCGGTCCTCTCCCATCTGGTCCTGGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: RGQPHLPQLTLH*CGPLPSGPGPG
Trigger: GCCAGGCCCAGGACCAGATGGGAGAGGACCGCACAAGTGCAGCGTGAGCTGTGGGAGGTGTGGCTGACCACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488252.6
CDS-3UTR CCA 90 bp CCACATCCACCACTGGAACTAGGGGTGGCTTCTCCATGTGGCCTGAGCCTGGGGGCTGGGTTGGGGGTGTaGGCAGGGCTGCGTAGGGCA +
Preference number: 4 (lower is better)
Translates to: PHPPLELGVASPCGLSLGAGLGV*AGLRRA
Trigger: TGCCCTACGCAGCCCTGCCCACACCCCCAACCCAGC...CCCCAGGCTCAGGCCACATGGAGAAGCCACCCCTAGTTCCAGTGGTGGATGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000488252.6
CDS-3UTR GCA 90 bp TCCCTGGCCCCATCTCCCCCAGCTGGCCGGCTCCAGCCACAGAAGCCTTCTCGGACGGCCAAGGTACGCTaGCCCTTTAAGTTCCAGACG +
Preference number: 4 (lower is better)
Translates to: SLAPSPPAGRLQPQKPSRTAKVR*PFKFQT
Trigger: CGTCTGGAACTTAAAGGGGCAGCGTACCTTGGCCGT...CCGAGAAGGCTTCTGTGGCTGGAGCCGGCCAGCTGGGGGAGATGGGGCCAGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477565.3
CDS-3UTR GCA 90 bp TCCCTGGCCCCATCTCCCCCAGCTGGCCGGCTCCAGCCACAGAAGCCTTCTCGGCCGCTCCTCAGTCTTTaGGGACAAGAAAGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: SLAPSPPAGRLQPQKPSRPLLSL*GQERGC
Trigger: ACAGCCCCTTTCTTGTCCGCAAAGACTGAGGAGCGG...CCGAGAAGGCTTCTGTGGCTGGAGCCGGCCAGCTGGGGGAGATGGGGCCAGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000477565.3
CDS-3UTR GCA 90 bp ATCCCAGCCCCAGAGCGTCTGCCCTCACCACTGCCCCACATGGAACTCCGTCTGAGGGAGCGACGCACATaGTCCTGCAGCCGGTACAGG +
Preference number: 4 (lower is better)
Translates to: IPAPERLPSPLPHMELRLRERRT*SCSRYR
Trigger: CCTGTACCGGCTGCAGGAGCATGTGCGTCGCTCCCT...CAGACGGAGTTCCATGTGGGGCAGTGGTGAGGGCAGACGCTCTGGGGCTGGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477565.3
CDS-3UTR CCA 90 bp AAGCCTTCTCGGTGCTTCTCGAACACTCCCAGGGATCCCAGCCCCAGAGCGTCTCGACGGCCAGGAGGCTaGTGGAGCGACACCCAGGCA +
Preference number: 4 (lower is better)
Translates to: KPSRCFSNTPRDPSPRASRRPGG*WSDTQA
Trigger: TGCCTGGGTGTCGCTCCACCAGCCTCCTGGCCGTCG...AGACGCTCTGGGGCTGGGATCCCTGGGAGTGTTCGAGAAGCACCGAGAAGGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477565.3
CDS-3UTR CCA 90 bp TGTGGCCTGAGCCTGGGGTGGGCGTTGCTGCTTGAGGCAGAATGCAGGTTGGGACGGAAGCCCGGAGGTTaGGACGCCCGCCTAAGCCTT +
Preference number: 4 (lower is better)
Translates to: CGLSLGWALLLEAECRLGRKPGG*DARLSL
Trigger: AAGGCTTAGGCGGGCGTCCCAACCTCCGGGCTTCCG...TCCCAACCTGCATTCTGCCTCAAGCAGCAACGCCCACCCCAGGCTCAGGCCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488252.6
CDS-3UTR CCA 90 bp GACAAGGGAGCTCTGATTGGCCAGGCCGAGGTGCCACATCCACCACTGGAACTACCCTCGGCACTGACCTaGGTTGGCGGAGGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: DKGALIGQAEVPHPPLELPSALT*VGGGWG
Trigger: CCCCCAGCCTCCGCCAACCCAGGTCAGTGCCGAGGG...TAGTTCCAGTGGTGGATGTGGCACCTCGGCCTGGCCAATCAGAGCTCCCTTGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488252.6
CDS-3UTR CCA 90 bp GGGAGCCGCTCTCCTGGCTCCCAGCCACCAGGAGAAACCCGGGCTGGCCTGCTGAATGCTTGCTGCCTGTaGTGTCCAGTAAGCGCTCAC +
Preference number: 4 (lower is better)
Translates to: GSRSPGSQPPGETRAGLLNACCL*CPVSAH
Trigger: GTGAGCGCTTACTGGACACCACAGGCAGCAAGCATT...CAGCAGGCCAGCCCGGGTTTCTCCTGGTGGCTGGGAGCCAGGAGAGCGGCTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488252.6
CDS-3UTR CCA 90 bp ACCGAGGACAATCACAGTGCCTGGCCAATAGGCAGGGGCTCGGTAAGTCCCCAGGGCTGCGTAGGGCACTaGGCTGGGCTGCTGACCCAC +
Preference number: 4 (lower is better)
Translates to: TEDNHSAWPIGRGSVSPQGCVGH*AGLLTH
Trigger: GTGGGTCAGCAGCCCAGCCCAGTGCCCTACGCAGCC...CTGGGGACTTACCGAGCCCCTGCCTATTGGCCAGGCACTGTGATTGTCCTCGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488252.6
CDS-3UTR TCA 90 bp CCACATCCACCACTGGAACTAGGGGTGGCTTCTCCATGTGGCCTGAGCCTGGGGCCTCCCCTCGACCTCTaGGAGGGCTTCCATGGCACA +
Preference number: 4 (lower is better)
Translates to: PHPPLELGVASPCGLSLGPPLDL*EGFHGT
Trigger: TGTGCCATGGAAGCCCTCTCAGAGGTCGAGGGGAGG...CCCCAGGCTCAGGCCACATGGAGAAGCCACCCCTAGTTCCAGTGGTGGATGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000488252.6
CDS-3UTR GCA 90 bp ATCCCAGCCCCAGAGCGTCTGCCCTCACCACTGCCCCACATGGAACTCCGTCTGCTGAGAGACGGTCCTTaGAGCTGGGAGTGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: IPAPERLPSPLPHMELRLLRDGP*SWEWQW
Trigger: CCACTGCCACTCCCAGCTGCAAGGACCGTCTCTCAG...CAGACGGAGTTCCATGTGGGGCAGTGGTGAGGGCAGACGCTCTGGGGCTGGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477565.3
CDS-3UTR GCA 90 bp AAGCCTTCTCGGTGCTTCTCGAACACTCCCAGGGATCCCAGCCCCAGAGCGTCTCAGCCCCAGAGCGTCTaGCCTCACCACTGCCCCACA +
Preference number: 4 (lower is better)
Translates to: KPSRCFSNTPRDPSPRASQPQSV*PHHCPT
Trigger: TGTGGGGCAGTGGTGAGGGCAGACGCTCTGGGGCTG...AGACGCTCTGGGGCTGGGATCCCTGGGAGTGTTCGAGAAGCACCGAGAAGGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000477565.3
CDS-3UTR GCA 90 bp GGAGCTCTGATTGGCCAGGCCGAGGTGCCACATCCACCACTGGAACTAGGGGTGGACACAGAGCAATCCTaGCGGGCAGCAGCAGCGGAG +
Preference number: 4 (lower is better)
Translates to: GALIGQAEVPHPPLELGVDTEQS*RAAAAE
Trigger: CTCCGCTGCTGCTGCCCGGCAGGATTGCTCTGTGTC...CACCCCTAGTTCCAGTGGTGGATGTGGCACCTCGGCCTGGCCAATCAGAGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488252.6
CDS-3UTR TCA 90 bp GGGCGTTGCTGCTTGAGGCAGAATGCAGGTTGGGAGGGTAGATCTGCGAATGTCGGCTACCCTCGGCACTaGCCTGGGTTGGCGGAGGCT +
Preference number: 4 (lower is better)
Translates to: GRCCLRQNAGWEGRSANVGYPRH*PGLAEA
Trigger: AGCCTCCGCCAACCCAGGTCAGTGCCGAGGGTAGCC...GACATTCGCAGATCTACCCTCCCAACCTGCATTCTGCCTCAAGCAGCAACGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488252.6
CDS-3UTR CCA 90 bp GCTCTGATTGGCCAGGCCGAGGTGCCACATCCACCACTGGAACTAGGGGTGGCTGTACAGGGCCACGGATaGCTCGTTGGCCAGGACGTA +
Preference number: 4 (lower is better)
Translates to: ALIGQAEVPHPPLELGVAVQGHG*LVGQDV
Trigger: TACGTCCTGGCCAACGAGCCATCCGTGGCCCTGTAC...AGCCACCCCTAGTTCCAGTGGTGGATGTGGCACCTCGGCCTGGCCAATCAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462790.8
ENST00000488252.6
CDS-3UTR CCA 90 bp GACAAGGGAGCTCTGATTGGCCAGGCCGAGGTGCCACATCCACCACTGGAACTAGGTTCCTCCGGGCTGTaGCCCTGGGCACTGGCATTC +
Preference number: 4 (lower is better)
Translates to: DKGALIGQAEVPHPPLELGSSGL*PWALAF
Trigger: GAATGCCAGTGCCCAGGGCCACAGCCCGGAGGAACC...TAGTTCCAGTGGTGGATGTGGCACCTCGGCCTGGCCAATCAGAGCTCCCTTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462790.8
ENST00000488252.6
ENST00000585679.1
CDS-3UTR CCA 90 bp GGGCGTTGCTGCTTGAGGCAGAATGCAGGTTGGGAGGGTAGATCTGCGAATGTCTGGGTTGGCGGAGGCTaGGGGGCCCCGAGTCTCTTC +
Preference number: 4 (lower is better)
Translates to: GRCCLRQNAGWEGRSANVWVGGG*GAPSLF
Trigger: GAAGAGACTCGGGGCCCCCCAGCCTCCGCCAACCCA...GACATTCGCAGATCTACCCTCCCAACCTGCATTCTGCCTCAAGCAGCAACGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000462790.8
ENST00000488252.6
ENST00000585679.1
3UTR CAA 72 bp ACAAGCAGGTGCCTGCCTGGCTGCCAAGCGGGCGGGTaGGTTAGTTCAGAGCAGAGAGAGAGGCTCGTGGCT +
Preference number: 4 (lower is better)
Translates to: TSRCLPGCQAGG*VSSEQRERLVA
Trigger: AGCCACGAGCCTCTCTCTCTGCTCTGAACTAACCAACCCGCCCGCTTGGCAGCCAGGCAGGCACCTGCTTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488252.6
CDS-3UTR GCA 90 bp GGAGCTCTGATTGGCCAGGCCGAGGTGCCACATCCACCACTGGAACTAGGGGTGTGGGGTGGGCGTTGCTaGTTGAGGCAGAATGCAGGT +
Preference number: 4 (lower is better)
Translates to: GALIGQAEVPHPPLELGVWGGRC*LRQNAG
Trigger: ACCTGCATTCTGCCTCAAGCAGCAACGCCCACCCCA...CACCCCTAGTTCCAGTGGTGGATGTGGCACCTCGGCCTGGCCAATCAGAGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462790.8
ENST00000488252.6
ENST00000585679.1
CDS-3UTR CCA 90 bp GGGCTGGCCTGCTGGAGAGGCCATGAGGAAAATCTGACCCCTGCTGCCAACAGTCCACGGATGGCTCGTTaGCCAGGACGTAGACGCTCT +
Preference number: 4 (lower is better)
Translates to: GLACWRGHEENLTPAANSPRMAR*PGRRRS
Trigger: AGAGCGTCTACGTCCTGGCCAACGAGCCATCCGTGG...ACTGTTGGCAGCAGGGGTCAGATTTTCCTCATGGCCTCTCCAGCAGGCCAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488252.6
CDS-3UTR CCA 90 bp CTTCCTGATGCTCCTGGTAGAACTCCCAGGAAAGGTCGCTCATTGGGTCACGTGCCCCTCGCCCCGGCCTaGTTCCCATACACCCAGCTC +
Preference number: 4 (lower is better)
Translates to: LPDAPGRTPRKGRSLGHVPLAPA*FPYTQL
Trigger: GAGCTGGGTGTATGGGAACCAGGCCGGGGCGAGGGG...CACGTGACCCAATGAGCGACCTTTCCTGGGAGTTCTACCAGGAGCATCAGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000462790.8
ENST00000488252.6
ENST00000585679.1
ENST00000588208.6
CDS-3UTR CCA 90 bp CCACATCCACCACTGGAACTAGGGGTGGCTTCTCCATGTGGCCTGAGCCTGGGGGGTCCCAGAGATAGGTaGGTAATTGCCCATGCCGGG +
Preference number: 4 (lower is better)
Translates to: PHPPLELGVASPCGLSLGGPRDR*VIAHAG
Trigger: CCCGGCATGGGCAATTACCCACCTATCTCTGGGACC...CCCCAGGCTCAGGCCACATGGAGAAGCCACCCCTAGTTCCAGTGGTGGATGTGG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000488252.6
CDS-3UTR GCA 90 bp GGGAGGGTAGATCTGCGAATGTCCAACTCAGCCTGTAGAGAAGGTGCAGTCCAGAGACAAGCAGGTGCCTaGCTGGCTGCCAAGCGGGCG +
Preference number: 4 (lower is better)
Translates to: GRVDLRMSNSACREGAVQRQAGA*LAAKRA
Trigger: CGCCCGCTTGGCAGCCAGGCAGGCACCTGCTTGTCT...CTGGACTGCACCTTCTCTACAGGCTGAGTTGGACATTCGCAGATCTACCCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488252.6
CDS-3UTR CCA 90 bp TGTCGTATGTCTCCTTGTGAGCCTGTCTGTCTCGGTCACTGCTATGTCCCCAGTCGGCCAGGAGGCTGGTaGAGCGACACCCAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: CRMSPCEPVCLGHCYVPSRPGGW*SDTQAG
Trigger: TCCTGCCTGGGTGTCGCTCCACCAGCCTCCTGGCCG...ACTGGGGACATAGCAGTGACCGAGACAGACAGGCTCACAAGGAGACATACGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477565.3
CDS-3UTR CCA 90 bp GGCAGAATGCAGGTTGGGAGGGTAGATCTGCGAATGTCCAACTCAGCCTGTAGACGACGGCCAGGAGGCTaGTGGAGCGACACCCAGGCA +
Preference number: 4 (lower is better)
Translates to: GRMQVGRVDLRMSNSACRRRPGG*WSDTQA
Trigger: TGCCTGGGTGTCGCTCCACCAGCCTCCTGGCCGTCG...TCTACAGGCTGAGTTGGACATTCGCAGATCTACCCTCCCAACCTGCATTCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488252.6
CDS-3UTR CCA 90 bp ACACCCAGCTCAACCTTCCTGATGCTCCTGGTAGAACTCCCAGGAAAGGTCGCTGGTTCCTCCGGGCTGTaGCCCTGGGCACTGGCATTC +
Preference number: 4 (lower is better)
Translates to: TPSSTFLMLLVELPGKVAGSSGL*PWALAF
Trigger: GAATGCCAGTGCCCAGGGCCACAGCCCGGAGGAACC...AGCGACCTTTCCTGGGAGTTCTACCAGGAGCATCAGGAAGGTTGAGCTGGGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462790.8
ENST00000488252.6
ENST00000585679.1
ENST00000588208.6
CDS-3UTR CCA 90 bp TGGTTCCCATACACCCAGCTCAACCTTCCTGATGCTCCTGGTAGAACTCCCAGGGGTTCCTCCGGGCTGTaGCCCTGGGCACTGGCATTC +
Preference number: 4 (lower is better)
Translates to: WFPYTQLNLPDAPGRTPRGSSGL*PWALAF
Trigger: GAATGCCAGTGCCCAGGGCCACAGCCCGGAGGAACC...CCTGGGAGTTCTACCAGGAGCATCAGGAAGGTTGAGCTGGGTGTATGGGAACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462790.8
ENST00000488252.6
ENST00000585679.1
ENST00000588208.6
CDS-3UTR CCA 90 bp TTCCTGATGCTCCTGGTAGAACTCCCAGGAAAGGTCGCTCATTGGGTCACGTGTTGGGTTGGCGGAGGCTaGGGGGCCCCGAGTCTCTTC +
Preference number: 4 (lower is better)
Translates to: FLMLLVELPGKVAHWVTCWVGGG*GAPSLF
Trigger: GAAGAGACTCGGGGCCCCCCAGCCTCCGCCAACCCA...ACACGTGACCCAATGAGCGACCTTTCCTGGGAGTTCTACCAGGAGCATCAGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000462790.8
ENST00000488252.6
ENST00000585679.1
ENST00000588208.6
CDS-3UTR CCA 90 bp AACCTTCCTGATGCTCCTGGTAGAACTCCCAGGAAAGGTCGCTCATTGGGTCACTGGGTTGGCGGAGGCTaGGGGGCCCCGAGTCTCTTC +
Preference number: 4 (lower is better)
Translates to: NLPDAPGRTPRKGRSLGHWVGGG*GAPSLF
Trigger: GAAGAGACTCGGGGCCCCCCAGCCTCCGCCAACCCA...GTGACCCAATGAGCGACCTTTCCTGGGAGTTCTACCAGGAGCATCAGGAAGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000462790.8
ENST00000488252.6
ENST00000585679.1
ENST00000588208.6
CDS-3UTR CCA 90 bp CATACACCCAGCTCAACCTTCCTGATGCTCCTGGTAGAACTCCCAGGAAAGGTCTGGGTTGGCGGAGGCTaGGGGGCCCCGAGTCTCTTC +
Preference number: 4 (lower is better)
Translates to: HTPSSTFLMLLVELPGKVWVGGG*GAPSLF
Trigger: GAAGAGACTCGGGGCCCCCCAGCCTCCGCCAACCCA...GACCTTTCCTGGGAGTTCTACCAGGAGCATCAGGAAGGTTGAGCTGGGTGTATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000462790.8
ENST00000488252.6
ENST00000585679.1
ENST00000588208.6
CDS-3UTR CCA 90 bp AACCTTCCTGATGCTCCTGGTAGAACTCCCAGGAAAGGTCGCTCATTGGGTCACCCCCTCGCCCCGGCCTaGTTCCCATACACCCAGCTC +
Preference number: 4 (lower is better)
Translates to: NLPDAPGRTPRKGRSLGHPLAPA*FPYTQL
Trigger: GAGCTGGGTGTATGGGAACCAGGCCGGGGCGAGGGG...GTGACCCAATGAGCGACCTTTCCTGGGAGTTCTACCAGGAGCATCAGGAAGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000462790.8
ENST00000488252.6
ENST00000585679.1
ENST00000588208.6
CDS-3UTR CCA 90 bp TCCCATACACCCAGCTCAACCTTCCTGATGCTCCTGGTAGAACTCCCAGGAAAGCCCCTCGCCCCGGCCTaGTTCCCATACACCCAGCTC +
Preference number: 4 (lower is better)
Translates to: SHTPSSTFLMLLVELPGKPLAPA*FPYTQL
Trigger: GAGCTGGGTGTATGGGAACCAGGCCGGGGCGAGGGG...CTTTCCTGGGAGTTCTACCAGGAGCATCAGGAAGGTTGAGCTGGGTGTATGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000462790.8
ENST00000488252.6
ENST00000585679.1
ENST00000588208.6
CDS-3UTR TCA 90 bp CGAATGTCCAACTCAGCCTGTAGAGAAGGTGCAGTCCAGCCTTCCTTATCCAGAACTGGGCTGGGCTGCTaGCCCACTCAGGCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: RMSNSACREGAVQPSLSRTGLGC*PTQAAP
Trigger: AGGGGCTGCCTGAGTGGGTCAGCAGCCCAGCCCAGT...TCTGGATAAGGAAGGCTGGACTGCACCTTCTCTACAGGCTGAGTTGGACATTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488252.6
CDS-3UTR GCA 90 bp CCTGGCCACGTGACTGGCCTCAACGGATGGGCCACCCACAAATGTGAAACCAGCCCGCTCCTCAGTCTTTaGGGACAAGAAAGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: PGHVTGLNGWATHKCETSPLLSL*GQERGC
Trigger: ACAGCCCCTTTCTTGTCCGCAAAGACTGAGGAGCGG...GCTGGTTTCACATTTGTGGGTGGCCCATCCGTTGAGGCCAGTCACGTGGCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488252.6
CDS-3UTR GCA 90 bp ATGCTCCTGGTAGAACTCCCAGGAAAGGTCGCTCATTGGGTCACGTGTCCATCTCGACGCACATGCTCCTaGAGCCGGTACAGGGCCACG +
Preference number: 4 (lower is better)
Translates to: MLLVELPGKVAHWVTCPSRRTCS*SRYRAT
Trigger: CGTGGCCCTGTACCGGCTGCAGGAGCATGTGCGTCG...AGATGGACACGTGACCCAATGAGCGACCTTTCCTGGGAGTTCTACCAGGAGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462790.8
ENST00000488252.6
CDS-3UTR GCA 90 bp ACACCCAGCTCAACCTTCCTGATGCTCCTGGTAGAACTCCCAGGAAAGGTCGCTAGGGAGCGACGCACATaGTCCTGCAGCCGGTACAGG +
Preference number: 4 (lower is better)
Translates to: TPSSTFLMLLVELPGKVARERRT*SCSRYR
Trigger: CCTGTACCGGCTGCAGGAGCATGTGCGTCGCTCCCT...AGCGACCTTTCCTGGGAGTTCTACCAGGAGCATCAGGAAGGTTGAGCTGGGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462790.8
ENST00000488252.6
CDS-3UTR GCA 90 bp CCCAGCTCAACCTTCCTGATGCTCCTGGTAGAACTCCCAGGAAAGGTCGCTCATTGCATGTCTGCCTTGTaGTGGGCCAGCTCGGGGAGG +
Preference number: 4 (lower is better)
Translates to: PSSTFLMLLVELPGKVAHCMSAL*WASSGR
Trigger: CCTCCCCGAGCTGGCCCAGCACAAGGCAGACATGCA...ATGAGCGACCTTTCCTGGGAGTTCTACCAGGAGCATCAGGAAGGTTGAGCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462790.8
ENST00000488252.6
CDS-3UTR GCA 90 bp CCTGATGCTCCTGGTAGAACTCCCAGGAAAGGTCGCTCATTGGGTCACGTGTCCCCAACGCTGCATGTCTaGCTTGTGCTGGGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: PDAPGRTPRKGRSLGHVSPTLHV*LVLGQL
Trigger: GAGCTGGCCCAGCACAAGGCAGACATGCAGCGTTGG...GGACACGTGACCCAATGAGCGACCTTTCCTGGGAGTTCTACCAGGAGCATCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462790.8
ENST00000488252.6
CDS-3UTR GCA 90 bp AACCTAGGACAAGGGAGCTCTGATTGGCCAGGCCGAGGTGCCACATCCACCACTAGACACCCCTCCACCTaGCACCTCCGAAATCATCCC +
Preference number: 4 (lower is better)
Translates to: NLGQGSSDWPGRGATSTTRHPST*HLRNHP
Trigger: GGGATGATTTCGGAGGTGGCAGGTGGAGGGGTGTCT...AGTGGTGGATGTGGCACCTCGGCCTGGCCAATCAGAGCTCCCTTGTCCTAGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488252.6
CDS-3UTR GCA 90 bp ACTCTGCAGGGACAAACGTGGATGAGACACAGAGCAATCCTGCCGGGCAGCAGCGGAACATTCTGGACCTaGAGACACCCCTCCACCTGC +
Preference number: 4 (lower is better)
Translates to: TLQGQTWMRHRAILPGSSGTFWT*RHPSTC
Trigger: GCAGGTGGAGGGGTGTCTGCAGGTCCAGAATGTTCC...GCTGCTGCCCGGCAGGATTGCTCTGTGTCTCATCCACGTTTGTCCCTGCAGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488252.6
CDS-3UTR GCA 90 bp TGCTGCTTGAGGCAGAATGCAGGTTGGGAGGGTAGATCTGCGAATGTCCAACTCGCCCATGCCGGGCTCTaGCTGAGAGACTGTGCACGG +
Preference number: 4 (lower is better)
Translates to: CCLRQNAGWEGRSANVQLAHAGL*LRDCAR
Trigger: CCGTGCACAGTCTCTCAGGCAGAGCCCGGCATGGGC...GAGTTGGACATTCGCAGATCTACCCTCCCAACCTGCATTCTGCCTCAAGCAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488252.6
CDS-3UTR GCA 90 bp GGGAGGGTAGATCTGCGAATGTCCAACTCAGCCTGTAGAGAAGGTGCAGTCCAGGGCTCTGTCTCCACCTaGCTCCCCTCGACCTCTGAG +
Preference number: 4 (lower is better)
Translates to: GRVDLRMSNSACREGAVQGSVST*LPSTSE
Trigger: CTCAGAGGTCGAGGGGAGGCAGGTGGAGACAGAGCC...CTGGACTGCACCTTCTCTACAGGCTGAGTTGGACATTCGCAGATCTACCCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488252.6
CDS-3UTR GCA 90 bp GGGAGCCGCTCTCCTGGCTCCCAGCCACCAGGAGAAACCCGGGCTGGCCTGCTGGAAGTATGCATCAACTaGCAGAGGTACTCAGTAAAT +
Preference number: 4 (lower is better)
Translates to: GSRSPGSQPPGETRAGLLEVCIN*QRYSVN
Trigger: ATTTACTGAGTACCTCTGGCAGTTGATGCATACTTC...CAGCAGGCCAGCCCGGGTTTCTCCTGGTGGCTGGGAGCCAGGAGAGCGGCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488252.6
CDS-3UTR CCA 90 bp CGAATGTCCAACTCAGCCTGTAGAGAAGGTGCAGTCCAGCCTTCCTTATCCAGACGGCCAGGAGGCTGGTaGAGCGACACCCAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: RMSNSACREGAVQPSLSRRPGGW*SDTQAG
Trigger: TCCTGCCTGGGTGTCGCTCCACCAGCCTCCTGGCCG...TCTGGATAAGGAAGGCTGGACTGCACCTTCTCTACAGGCTGAGTTGGACATTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488252.6
CDS-3UTR CCA 90 bp GGCAGAATGCAGGTTGGGAGGGTAGATCTGCGAATGTCCAACTCAGCCTGTAGAGTGAAACCCCGTCTCTaGGTTGGCGGAGGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: GRMQVGRVDLRMSNSACRVKPRL*VGGGWG
Trigger: CCCCCAGCCTCCGCCAACCCAGAGACGGGGTTTCAC...TCTACAGGCTGAGTTGGACATTCGCAGATCTACCCTCCCAACCTGCATTCTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462790.8
ENST00000585679.1
CDS-3UTR CCA 90 bp TCCCATACACCCAGCTCAACCTTCCTGATGCTCCTGGTAGAACTCCCAGGAAAGAAGCAGGTGCCTGCCTaGCTGCCAAGCGGGCGGGTT +
Preference number: 4 (lower is better)
Translates to: SHTPSSTFLMLLVELPGKKQVPA*LPSGRV
Trigger: AACCCGCCCGCTTGGCAGCCAGGCAGGCACCTGCTT...CTTTCCTGGGAGTTCTACCAGGAGCATCAGGAAGGTTGAGCTGGGTGTATGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488252.6
CDS-3UTR CCA 90 bp TCCCATACACCCAGCTCAACCTTCCTGATGCTCCTGGTAGAACTCCCAGGAAAGGCCTGGCCACGTGACTaGCCTCAACGGATGGGCCAC +
Preference number: 4 (lower is better)
Translates to: SHTPSSTFLMLLVELPGKAWPRD*PQRMGH
Trigger: GTGGCCCATCCGTTGAGGCCAGTCACGTGGCCAGGC...CTTTCCTGGGAGTTCTACCAGGAGCATCAGGAAGGTTGAGCTGGGTGTATGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488252.6
CDS-3UTR CCA 90 bp ACTAAGTGCTCTCTGACTGCACACATGAATTCGGCTGCCTCTGGGCTCTGGGGCATCTGGTCCTGGGCCTaGCCACGTGACTGGCCTCAA +
Preference number: 4 (lower is better)
Translates to: TKCSLTAHMNSAASGLWGIWSWA*PRDWPQ
Trigger: TTGAGGCCAGTCACGTGGCCAGGCCCAGGACCAGAT...GCCCCAGAGCCCAGAGGCAGCCGAATTCATGTGTGCAGTCAGAGAGCACTTAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488252.6
CDS-3UTR CCA 90 bp CTCAACCTTCCTGATGCTCCTGGTAGAACTCCCAGGAAAGGTCGCTCATTGGGTCTGCTTCAGGCCCCCTaGAAAGCTCCCAGGCCACCC +
Preference number: 4 (lower is better)
Translates to: LNLPDAPGRTPRKGRSLGLLQAP*KAPRPP
Trigger: GGGTGGCCTGGGAGCTTTCCAGGGGGCCTGAAGCAG...ACCCAATGAGCGACCTTTCCTGGGAGTTCTACCAGGAGCATCAGGAAGGTTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488252.6
CDS-3UTR CCA 90 bp CTCAACCTTCCTGATGCTCCTGGTAGAACTCCCAGGAAAGGTCGCTCATTGGGTCGTAGGGCACTGGGCTaGGCTGCTGACCCACTCAGG +
Preference number: 4 (lower is better)
Translates to: LNLPDAPGRTPRKGRSLGRRALG*AADPLR
Trigger: CCTGAGTGGGTCAGCAGCCCAGCCCAGTGCCCTACG...ACCCAATGAGCGACCTTTCCTGGGAGTTCTACCAGGAGCATCAGGAAGGTTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488252.6
CDS-3UTR CCA 90 bp TTCCTGATGCTCCTGGTAGAACTCCCAGGAAAGGTCGCTCATTGGGTCACGTGTCCAGGGTGTGGGGGATaGGACTGGGGAGACAGAGGC +
Preference number: 4 (lower is better)
Translates to: FLMLLVELPGKVAHWVTCPGCGG*DWGDRG
Trigger: GCCTCTGTCTCCCCAGTCCCATCCCCCACACCCTGG...ACACGTGACCCAATGAGCGACCTTTCCTGGGAGTTCTACCAGGAGCATCAGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488252.6
CDS-3UTR TCA 90 bp CCTGGTTCCCATACACCCAGCTCAACCTTCCTGATGCTCCTGGTAGAACTCCCAGTGGGCGTTGCTGCTTaGGGCAGAATGCAGGTTGGG +
Preference number: 4 (lower is better)
Translates to: PGSHTPSSTFLMLLVELPVGVAA*GRMQVG
Trigger: CCCAACCTGCATTCTGCCTCAAGCAGCAACGCCCAC...TGGGAGTTCTACCAGGAGCATCAGGAAGGTTGAGCTGGGTGTATGGGAACCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462790.8
ENST00000488252.6
ENST00000585679.1
CDS-3UTR TCA 90 bp CCTCTGAGATGCGGCATGAGGCTGGCGGTTCCAGGGAGAGGCGAGGAACTCTGCGAGCTAAGCCTGCTATaGACAGGTACTCAGGAAGTA +
Preference number: 4 (lower is better)
Translates to: PLRCGMRLAVPGRGEELCELSLL*TGTQEV
Trigger: TACTTCCTGAGTACCTGTTCATAGCAGGCTTAGCTC...GCAGAGTTCCTCGCCTCTCCCTGGAACCGCCAGCCTCATGCCGCATCTCAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488252.6
CDS-3UTR GCA 90 bp CATACACCCAGCTCAACCTTCCTGATGCTCCTGGTAGAACTCCCAGGAAAGGTCAGGGAGCGACGCACATaGTCCTGCAGCCGGTACAGG +
Preference number: 4 (lower is better)
Translates to: HTPSSTFLMLLVELPGKVRERRT*SCSRYR
Trigger: CCTGTACCGGCTGCAGGAGCATGTGCGTCGCTCCCT...GACCTTTCCTGGGAGTTCTACCAGGAGCATCAGGAAGGTTGAGCTGGGTGTATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462790.8
ENST00000488252.6
CDS-3UTR GCA 90 bp TGGTTCCCATACACCCAGCTCAACCTTCCTGATGCTCCTGGTAGAACTCCCAGGGCCTGGGGTGGGCGTTaGTGCTTGAGGCAGAATGCA +
Preference number: 4 (lower is better)
Translates to: WFPYTQLNLPDAPGRTPRAWGGR*CLRQNA
Trigger: TGCATTCTGCCTCAAGCAGCAACGCCCACCCCAGGC...CCTGGGAGTTCTACCAGGAGCATCAGGAAGGTTGAGCTGGGTGTATGGGAACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462790.8
ENST00000488252.6
ENST00000585679.1
CDS-3UTR GCA 90 bp TGCTTGCTGCCTGTGGTGTCCAGTAAGCGCTCACTGATTGACTACAGTGCCCACAAACCCGGGCTGGCCTaGTGGAGAGGCCATGAGGAA +
Preference number: 4 (lower is better)
Translates to: CLLPVVSSKRSLIDYSAHKPGLA*WRGHEE
Trigger: TTCCTCATGGCCTCTCCAGCAGGCCAGCCCGGGTTT...GTGGGCACTGTAGTCAATCAGTGAGCGCTTACTGGACACCACAGGCAGCAAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488252.6
CDS-3UTR GCA 90 bp GGGAGGGTAGATCTGCGAATGTCCAACTCAGCCTGTAGAGAAGGTGCAGTCCAGAGGGCCCCTTTGACCTaGCTGCGTCTGCCCATCACA +
Preference number: 4 (lower is better)
Translates to: GRVDLRMSNSACREGAVQRAPLT*LRLPIT
Trigger: TGTGATGGGCAGACGCAGGCAGGTCAAAGGGGCCCT...CTGGACTGCACCTTCTCTACAGGCTGAGTTGGACATTCGCAGATCTACCCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488252.6
CDS-3UTR GCA 90 bp GCCTGTGGGATTCCTCACCACCCCACATCCAGAGCTAAGCCTGCTATGAACAGGCGAGGACAATCACAGTaGCTGGCCAATAGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: ACGIPHHPTSRAKPAMNRRGQSQ*LANRQG
Trigger: CCCCTGCCTATTGGCCAGGCACTGTGATTGTCCTCG...CCTGTTCATAGCAGGCTTAGCTCTGGATGTGGGGTGGTGAGGAATCCCACAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488252.6
CDS-3UTR CCA 90 bp GACAAGGGAGCTCTGATTGGCCAGGCCGAGGTGCCACATCCACCACTGGAACTAACTCCACAGTGTAGATaGCTCCCTGGCTCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: DKGALIGQAEVPHPPLELTPQCR*LPGSAP
Trigger: AGGAGCAGAGCCAGGGAGCCATCTACACTGTGGAGT...TAGTTCCAGTGGTGGATGTGGCACCTCGGCCTGGCCAATCAGAGCTCCCTTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462790.8
ENST00000488252.6
CDS-3UTR CCA 90 bp TGCGAATGTCCAACTCAGCCTGTAGAGAAGGTGCAGTCCAGCCTTCCTTATCCAGTGAAACCCCGTCTCTaGGTTGGCGGAGGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: CECPTQPVEKVQSSLPYPVKPRL*VGGGWG
Trigger: CCCCCAGCCTCCGCCAACCCAGAGACGGGGTTTCAC...TGGATAAGGAAGGCTGGACTGCACCTTCTCTACAGGCTGAGTTGGACATTCGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462790.8
ENST00000585679.1
CDS-3UTR CCA 90 bp CCAACTCAGCCTGTAGAGAAGGTGCAGTCCAGCCTTCCTTATCCAGATGAAGAACCCCTCGCCCCGGCCTaGTTCCCATACACCCAGCTC +
Preference number: 4 (lower is better)
Translates to: PTQPVEKVQSSLPYPDEEPLAPA*FPYTQL
Trigger: GAGCTGGGTGTATGGGAACCAGGCCGGGGCGAGGGG...TTCTTCATCTGGATAAGGAAGGCTGGACTGCACCTTCTCTACAGGCTGAGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462790.8
ENST00000488252.6
ENST00000585679.1
CDS-3UTR CCA 90 bp CCCGCAGTGTTCTTCACAGCGCATCTGACATGCTCTTGTCTGCCATGTTTACCTCACCACTGCCCCACATaGAACTCCGTCTGCCCCCGG +
Preference number: 4 (lower is better)
Translates to: PAVFFTAHLTCSCLPCLPHHCPT*NSVCPR
Trigger: CCGGGGGCAGACGGAGTTCCATGTGGGGCAGTGGTG...AGGTAAACATGGCAGACAAGAGCATGTCAGATGCGCTGTGAAGAACACTGCGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477565.3
CDS-3UTR CCA 90 bp TGGTTCCCATACACCCAGCTCAACCTTCCTGATGCTCCTGGTAGAACTCCCAGGTGCTGCCAACAGTCCTaGCCAAGGGACCCCCTGACT +
Preference number: 4 (lower is better)
Translates to: WFPYTQLNLPDAPGRTPRCCQQS*PRDPLT
Trigger: AGTCAGGGGGTCCCTTGGCCAGGACTGTTGGCAGCA...CCTGGGAGTTCTACCAGGAGCATCAGGAAGGTTGAGCTGGGTGTATGGGAACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488252.6
CDS-3UTR CCA 90 bp ACACCCAGCTCAACCTTCCTGATGCTCCTGGTAGAACTCCCAGGAAAGGTCGCTAACCAGCACTCTGCATaGGAGCCGCTCTCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: TPSSTFLMLLVELPGKVANQHSA*EPLSWL
Trigger: GAGCCAGGAGAGCGGCTCCCATGCAGAGTGCTGGTT...AGCGACCTTTCCTGGGAGTTCTACCAGGAGCATCAGGAAGGTTGAGCTGGGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488252.6
CDS-3UTR CCA 90 bp CATACACCCAGCTCAACCTTCCTGATGCTCCTGGTAGAACTCCCAGGAAAGGTCTCTCCCATCTGGTCCTaGGCCTGGCCACGTGACTGG +
Preference number: 4 (lower is better)
Translates to: HTPSSTFLMLLVELPGKVSPIWS*AWPRDW
Trigger: CCAGTCACGTGGCCAGGCCCAGGACCAGATGGGAGA...GACCTTTCCTGGGAGTTCTACCAGGAGCATCAGGAAGGTTGAGCTGGGTGTATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488252.6
CDS-3UTR TCA 90 bp CCACATCCACCACTGGAACTAGGGGTGGCTTCTCCATGTGGCCTGAGCCTGGGGCCTTCCTTATCCAGATaGAGAAAGGGAGAACCAAGG +
Preference number: 4 (lower is better)
Translates to: PHPPLELGVASPCGLSLGPSLSR*RKGEPR
Trigger: CCTTGGTTCTCCCTTTCTTCATCTGGATAAGGAAGG...CCCCAGGCTCAGGCCACATGGAGAAGCCACCCCTAGTTCCAGTGGTGGATGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462790.8
ENST00000488252.6
ENST00000585679.1
CDS-3UTR TCA 90 bp CTGGTAGAACTCCCAGGAAAGGTCGCTCATTGGGTCACGTGTCCATCTCAAACCGTGGGCGTTGCTGCTTaGGGCAGAATGCAGGTTGGG +
Preference number: 4 (lower is better)
Translates to: LVELPGKVAHWVTCPSQTVGVAA*GRMQVG
Trigger: CCCAACCTGCATTCTGCCTCAAGCAGCAACGCCCAC...GGTTTGAGATGGACACGTGACCCAATGAGCGACCTTTCCTGGGAGTTCTACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462790.8
ENST00000488252.6
ENST00000585679.1
CDS-3UTR GCA 90 bp GCAGTGTTCTTCACAGCGCATCTGACATGCTCTTGTCTGCCATGTTTACCTGGTCGACGCACATGCTCCTaGAGCCGGTACAGGGCCACG +
Preference number: 4 (lower is better)
Translates to: AVFFTAHLTCSCLPCLPGRRTCS*SRYRAT
Trigger: CGTGGCCCTGTACCGGCTGCAGGAGCATGTGCGTCG...ACCAGGTAAACATGGCAGACAAGAGCATGTCAGATGCGCTGTGAAGAACACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477565.3
CDS-3UTR GCA 90 bp AGGGTAGATCTGCGAATGTCCAACTCAGCCTGTAGAGAAGGTGCAGTCCAGCCTCCAACGCTGCATGTCTaGCTTGTGCTGGGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: RVDLRMSNSACREGAVQPPTLHV*LVLGQL
Trigger: GAGCTGGCCCAGCACAAGGCAGACATGCAGCGTTGG...AGGCTGGACTGCACCTTCTCTACAGGCTGAGTTGGACATTCGCAGATCTACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462790.8
ENST00000488252.6
CDS-3UTR GCA 90 bp TGTCGTATGTCTCCTTGTGAGCCTGTCTGTCTCGGTCACTGCTATGTCCCCAGTCCAACGCTGCATGTCTaGCTTGTGCTGGGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: CRMSPCEPVCLGHCYVPSPTLHV*LVLGQL
Trigger: GAGCTGGCCCAGCACAAGGCAGACATGCAGCGTTGG...ACTGGGGACATAGCAGTGACCGAGACAGACAGGCTCACAAGGAGACATACGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477565.3
CDS-3UTR GCA 90 bp TACACCCAGCTCAACCTTCCTGATGCTCCTGGTAGAACTCCCAGGAAAGGTCGCGGTTCTTCACGGCGCTaGAGGCGTACTCCACAGTGT +
Preference number: 4 (lower is better)
Translates to: YTQLNLPDAPGRTPRKGRGSSRR*RRTPQC
Trigger: ACACTGTGGAGTACGCCTGCAGCGCCGTGAAGAACC...GCGACCTTTCCTGGGAGTTCTACCAGGAGCATCAGGAAGGTTGAGCTGGGTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462790.8
ENST00000488252.6
ENST00000588208.6
CDS-3UTR GCA 90 bp CTTCCTGATGCTCCTGGTAGAACTCCCAGGAAAGGTCGCTCATTGGGTCACGTGGGTTCTTCACGGCGCTaGAGGCGTACTCCACAGTGT +
Preference number: 4 (lower is better)
Translates to: LPDAPGRTPRKGRSLGHVGSSRR*RRTPQC
Trigger: ACACTGTGGAGTACGCCTGCAGCGCCGTGAAGAACC...CACGTGACCCAATGAGCGACCTTTCCTGGGAGTTCTACCAGGAGCATCAGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462790.8
ENST00000488252.6
ENST00000588208.6
CDS-3UTR GCA 90 bp CTCAACCTTCCTGATGCTCCTGGTAGAACTCCCAGGAAAGGTCGCTCATTGGGTGCCTGGGGTGGGCGTTaGTGCTTGAGGCAGAATGCA +
Preference number: 4 (lower is better)
Translates to: LNLPDAPGRTPRKGRSLGAWGGR*CLRQNA
Trigger: TGCATTCTGCCTCAAGCAGCAACGCCCACCCCAGGC...ACCCAATGAGCGACCTTTCCTGGGAGTTCTACCAGGAGCATCAGGAAGGTTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462790.8
ENST00000488252.6
ENST00000585679.1
CDS-3UTR GCA 90 bp CATACACCCAGCTCAACCTTCCTGATGCTCCTGGTAGAACTCCCAGGAAAGGTCGCCTGGGGTGGGCGTTaGTGCTTGAGGCAGAATGCA +
Preference number: 4 (lower is better)
Translates to: HTPSSTFLMLLVELPGKVAWGGR*CLRQNA
Trigger: TGCATTCTGCCTCAAGCAGCAACGCCCACCCCAGGC...GACCTTTCCTGGGAGTTCTACCAGGAGCATCAGGAAGGTTGAGCTGGGTGTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462790.8
ENST00000488252.6
ENST00000585679.1
CDS-3UTR GCA 90 bp TGCTTGCTGCCTGTGGTGTCCAGTAAGCGCTCACTGATTGACTACAGTGCCCACGTGAAACCAGCACTCTaGATGGGAGCCGCTCTCCTG +
Preference number: 4 (lower is better)
Translates to: CLLPVVSSKRSLIDYSAHVKPAL*MGAALL
Trigger: CAGGAGAGCGGCTCCCATGCAGAGTGCTGGTTTCAC...GTGGGCACTGTAGTCAATCAGTGAGCGCTTACTGGACACCACAGGCAGCAAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488252.6
CDS-3UTR GCA 90 bp ACCTGCCACCTCCGAAATCATCCCACAAGCCCAGTGAGAAACCCCAAGTGGTTATCCCACAGCTCACGCTaGACTTGTGCGGTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: TCHLRNHPTSPVRNPKWLSHSSR*TCAVLS
Trigger: GGAGAGGACCGCACAAGTGCAGCGTGAGCTGTGGGA...TAACCACTTGGGGTTTCTCACTGGGCTTGTGGGATGATTTCGGAGGTGGCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488252.6
CDS-3UTR CCA 90 bp AACTCAGGTTATAGATGCCACAGGACAAGAGGAGGTCACCAGACACCAGGACAACGGAAGCCCGGAGGTTaGGACGCCCGCCTAAGCCTT +
Preference number: 4 (lower is better)
Translates to: NSGYRCHRTRGGHQTPGQRKPGG*DARLSL
Trigger: AAGGCTTAGGCGGGCGTCCCAACCTCCGGGCTTCCG...TTGTCCTGGTGTCTGGTGACCTCCTCTTGTCCTGTGGCATCTATAACCTGAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477565.3
CDS-3UTR CCA 90 bp GGCAGAATGCAGGTTGGGAGGGTAGATCTGCGAATGTCCAACTCAGCCTGTAGACCACGGATGGCTCGTTaGCCAGGACGTAGACGCTCT +
Preference number: 4 (lower is better)
Translates to: GRMQVGRVDLRMSNSACRPRMAR*PGRRRS
Trigger: AGAGCGTCTACGTCCTGGCCAACGAGCCATCCGTGG...TCTACAGGCTGAGTTGGACATTCGCAGATCTACCCTCCCAACCTGCATTCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462790.8
ENST00000488252.6
CDS-3UTR CCA 90 bp GGCCCCGCAGTGTTCTTCACAGCGCATCTGACATGCTCTTGTCTGCCATGTTTACCACGGATGGCTCGTTaGCCAGGACGTAGACGCTCT +
Preference number: 4 (lower is better)
Translates to: GPAVFFTAHLTCSCLPCLPRMAR*PGRRRS
Trigger: AGAGCGTCTACGTCCTGGCCAACGAGCCATCCGTGG...TAAACATGGCAGACAAGAGCATGTCAGATGCGCTGTGAAGAACACTGCGGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477565.3
CDS-3UTR CCA 90 bp GGCAGAATGCAGGTTGGGAGGGTAGATCTGCGAATGTCCAACTCAGCCTGTAGAGTACAGGGCCACGGATaGCTCGTTGGCCAGGACGTA +
Preference number: 4 (lower is better)
Translates to: GRMQVGRVDLRMSNSACRVQGHG*LVGQDV
Trigger: TACGTCCTGGCCAACGAGCCATCCGTGGCCCTGTAC...TCTACAGGCTGAGTTGGACATTCGCAGATCTACCCTCCCAACCTGCATTCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462790.8
ENST00000488252.6
CDS-3UTR CCA 90 bp AGGGTAGATCTGCGAATGTCCAACTCAGCCTGTAGAGAAGGTGCAGTCCAGCCTCAAGGGAGCTCTGATTaGCCAGGCCGAGGTGCCACA +
Preference number: 4 (lower is better)
Translates to: RVDLRMSNSACREGAVQPQGSSD*PGRGAT
Trigger: TGTGGCACCTCGGCCTGGCCAATCAGAGCTCCCTTG...AGGCTGGACTGCACCTTCTCTACAGGCTGAGTTGGACATTCGCAGATCTACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462790.8
ENST00000488252.6
ENST00000585679.1
CDS-3UTR CCA 90 bp AACTCAGGTTATAGATGCCACAGGACAAGAGGAGGTCACCAGACACCAGGACAACCCATCTCCCCCAGCTaGCCGGCTCCAGCCACAGAA +
Preference number: 4 (lower is better)
Translates to: NSGYRCHRTRGGHQTPGQPISPS*PAPATE
Trigger: TTCTGTGGCTGGAGCCGGCCAGCTGGGGGAGATGGG...TTGTCCTGGTGTCTGGTGACCTCCTCTTGTCCTGTGGCATCTATAACCTGAGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477565.3
CDS-3UTR CCA 90 bp GGGAGGGTAGATCTGCGAATGTCCAACTCAGCCTGTAGAGAAGGTGCAGTCCAGAGAGATGGGCTGACATaGTCCCTGAGCAGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: GRVDLRMSNSACREGAVQRDGLT*SLSSRV
Trigger: CACCCTGCTGCTCAGGGACCATGTCAGCCCATCTCT...CTGGACTGCACCTTCTCTACAGGCTGAGTTGGACATTCGCAGATCTACCCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488252.6
CDS-3UTR CCA 90 bp AACTCCCAGGAAAGGTCGCTCATTGGGTCACGTGTCCATCTCAAACCAATCACTCGGTCCTCTCCCATCTaGTCCTGGGCCTGGCCACGT +
Preference number: 4 (lower is better)
Translates to: NSQERSLIGSRVHLKPITRSSPI*SWAWPR
Trigger: ACGTGGCCAGGCCCAGGACCAGATGGGAGAGGACCG...AGTGATTGGTTTGAGATGGACACGTGACCCAATGAGCGACCTTTCCTGGGAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488252.6
CDS-3UTR CCA 90 bp TGCTTGCTGCCTGTGGTGTCCAGTAAGCGCTCACTGATTGACTACAGTGCCCACGAATTCGGCTGCCTCTaGGCTCTGGGGCTACAGCTT +
Preference number: 4 (lower is better)
Translates to: CLLPVVSSKRSLIDYSAHEFGCL*ALGLQL
Trigger: AAGCTGTAGCCCCAGAGCCCAGAGGCAGCCGAATTC...GTGGGCACTGTAGTCAATCAGTGAGCGCTTACTGGACACCACAGGCAGCAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488252.6
CDS-3UTR CCA 90 bp AACCTTCCTGATGCTCCTGGTAGAACTCCCAGGAAAGGTCGCTCATTGGGTCACCAATCACTAGGAACCTaGGTTGGCGGAGGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: NLPDAPGRTPRKGRSLGHQSLGT*VGGGWG
Trigger: CCCCCAGCCTCCGCCAACCCAGGTTCCTAGTGATTG...GTGACCCAATGAGCGACCTTTCCTGGGAGTTCTACCAGGAGCATCAGGAAGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588208.6
CDS-3UTR TCA 90 bp ATCCCAGCCCCAGAGCGTCTGCCCTCACCACTGCCCCACATGGAACTCCGTCTGGACCTCGGTATTAAGTaGCTGAACTCAGGTTATAGA +
Preference number: 4 (lower is better)
Translates to: IPAPERLPSPLPHMELRLDLGIK*LNSGYR
Trigger: TCTATAACCTGAGTTCAGTCACTTAATACCGAGGTC...CAGACGGAGTTCCATGTGGGGCAGTGGTGAGGGCAGACGCTCTGGGGCTGGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477565.3
CDS-3UTR TCA 90 bp TACACCCAGCTCAACCTTCCTGATGCTCCTGGTAGAACTCCCAGGAAAGGTCGCGCCATGAGGAAAATCTaGCCCCTGCTGCCAACAGTC +
Preference number: 4 (lower is better)
Translates to: YTQLNLPDAPGRTPRKGRAMRKI*PLLPTV
Trigger: GACTGTTGGCAGCAGGGGTCAGATTTTCCTCATGGC...GCGACCTTTCCTGGGAGTTCTACCAGGAGCATCAGGAAGGTTGAGCTGGGTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488252.6
CDS-3UTR TCA 90 bp GGGCGTTGCTGCTTGAGGCAGAATGCAGGTTGGGAGGGTAGATCTGCGAATGTCCCAGTAAGCGCTCACTaGTTGACTACAGTGCCCACT +
Preference number: 4 (lower is better)
Translates to: GRCCLRQNAGWEGRSANVPVSAH*LTTVPT
Trigger: AGTGGGCACTGTAGTCAATCAGTGAGCGCTTACTGG...GACATTCGCAGATCTACCCTCCCAACCTGCATTCTGCCTCAAGCAGCAACGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488252.6
CDS-3UTR GCA 90 bp AACTCAGGTTATAGATGCCACAGGACAAGAGGAGGTCACCAGACACCAGGACAATGCATGTCTGCCTTGTaGTGGGCCAGCTCGGGGAGG +
Preference number: 4 (lower is better)
Translates to: NSGYRCHRTRGGHQTPGQCMSAL*WASSGR
Trigger: CCTCCCCGAGCTGGCCCAGCACAAGGCAGACATGCA...TTGTCCTGGTGTCTGGTGACCTCCTCTTGTCCTGTGGCATCTATAACCTGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477565.3
CDS-3UTR GCA 90 bp GTAGAACTCCCAGGAAAGGTCGCTCATTGGGTCACGTGTCCATCTCAAACCAATTGCATGTCTGCCTTGTaGTGGGCCAGCTCGGGGAGG +
Preference number: 4 (lower is better)
Translates to: VELPGKVAHWVTCPSQTNCMSAL*WASSGR
Trigger: CCTCCCCGAGCTGGCCCAGCACAAGGCAGACATGCA...ATTGGTTTGAGATGGACACGTGACCCAATGAGCGACCTTTCCTGGGAGTTCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462790.8
ENST00000488252.6
CDS-3UTR GCA 90 bp ATGCTCCTGGTAGAACTCCCAGGAAAGGTCGCTCATTGGGTCACGTGTCCATCTTGGGGTGGGCGTTGCTaGTTGAGGCAGAATGCAGGT +
Preference number: 4 (lower is better)
Translates to: MLLVELPGKVAHWVTCPSWGGRC*LRQNAG
Trigger: ACCTGCATTCTGCCTCAAGCAGCAACGCCCACCCCA...AGATGGACACGTGACCCAATGAGCGACCTTTCCTGGGAGTTCTACCAGGAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462790.8
ENST00000488252.6
ENST00000585679.1
CDS-3UTR GCA 90 bp ACCTGCCACCTCCGAAATCATCCCACAAGCCCAGTGAGAAACCCCAAGTGGTTATGGGGTGGGCGTTGCTaGTTGAGGCAGAATGCAGGT +
Preference number: 4 (lower is better)
Translates to: TCHLRNHPTSPVRNPKWLWGGRC*LRQNAG
Trigger: ACCTGCATTCTGCCTCAAGCAGCAACGCCCACCCCA...TAACCACTTGGGGTTTCTCACTGGGCTTGTGGGATGATTTCGGAGGTGGCAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488252.6
CDS-3UTR GCA 90 bp CTCAACCTTCCTGATGCTCCTGGTAGAACTCCCAGGAAAGGTCGCTCATTGGGTGTGGGTAATTGCCCATaGCGGGCTCTGCCTGAGAGA +
Preference number: 4 (lower is better)
Translates to: LNLPDAPGRTPRKGRSLGVGNCP*RALPER
Trigger: TCTCTCAGGCAGAGCCCGGCATGGGCAATTACCCAC...ACCCAATGAGCGACCTTTCCTGGGAGTTCTACCAGGAGCATCAGGAAGGTTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488252.6
CDS-3UTR GCA 90 bp TACACCCAGCTCAACCTTCCTGATGCTCCTGGTAGAACTCCCAGGAAAGGTCGCACACATGAATTCGGCTaGCTCTGGGCTCTGGGGCTA +
Preference number: 4 (lower is better)
Translates to: YTQLNLPDAPGRTPRKGRTHEFG*LWALGL
Trigger: TAGCCCCAGAGCCCAGAGGCAGCCGAATTCATGTGT...GCGACCTTTCCTGGGAGTTCTACCAGGAGCATCAGGAAGGTTGAGCTGGGTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488252.6
CDS-3UTR CCA 90 bp AACCTAGGACAAGGGAGCTCTGATTGGCCAGGCCGAGGTGCCACATCCACCACTAGGCAGAATGCAGGTTaGGAGGGTAGATCTGCGAAT +
Preference number: 4 (lower is better)
Translates to: NLGQGSSDWPGRGATSTTRQNAG*EGRSAN
Trigger: ATTCGCAGATCTACCCTCCCAACCTGCATTCTGCCT...AGTGGTGGATGTGGCACCTCGGCCTGGCCAATCAGAGCTCCCTTGTCCTAGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462790.8
ENST00000488252.6
ENST00000585679.1
CDS-3UTR CCA 90 bp CTCAACCTTCCTGATGCTCCTGGTAGAACTCCCAGGAAAGGTCGCTCATTGGGTTGCCCTGCACCCTCTTaGTCACCTGAGAGCCACCTT +
Preference number: 4 (lower is better)
Translates to: LNLPDAPGRTPRKGRSLGCPAPS*SPESHL
Trigger: AAGGTGGCTCTCAGGTGACCAAGAGGGTGCAGGGCA...ACCCAATGAGCGACCTTTCCTGGGAGTTCTACCAGGAGCATCAGGAAGGTTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488252.6
CDS-3UTR CCA 90 bp AACTCCCAGGAAAGGTCGCTCATTGGGTCACGTGTCCATCTCAAACCAATCACTCCACCCCTCAGCCTGTaGGATTCCTCACCACCCCAC +
Preference number: 4 (lower is better)
Translates to: NSQERSLIGSRVHLKPITPPLSL*DSSPPH
Trigger: GTGGGGTGGTGAGGAATCCCACAGGCTGAGGGGTGG...AGTGATTGGTTTGAGATGGACACGTGACCCAATGAGCGACCTTTCCTGGGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488252.6
3UTR CAA 72 bp TCCCAGCTACTCGGGAGGCTGAAGCGGGATAATCGCTaGAACCTGACAGGCAGAGGTTACACTGAACCGAGA +
Preference number: 4 (lower is better)
Translates to: SQLLGRLKRDNR*NLTGRGYTEPR
Trigger: TCTCGGTTCAGTGTAACCTCTGCCTGTCAGGTTCAAGCGATTATCCCGCTTCAGCCTCCCGAGTAGCTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488252.6
CDS-3UTR TCA 90 bp AACTCCCAGGAAAGGTCGCTCATTGGGTCACGTGTCCATCTCAAACCAATCACTGCGCTTTCTTCCCCTTaGGCTGCATCTCCGGCTCCT +
Preference number: 4 (lower is better)
Translates to: NSQERSLIGSRVHLKPITALSSP*AASPAP
Trigger: AGGAGCCGGAGATGCAGCTCAAGGGGAAGAAAGCGC...AGTGATTGGTTTGAGATGGACACGTGACCCAATGAGCGACCTTTCCTGGGAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585679.1
CDS-3UTR TCA 90 bp ATCCCAGCCCCAGAGCGTCTGCCCTCACCACTGCCCCACATGGAACTCCGTCTGAATGTTCAAGGACTGTaGGTGCTTTTCGTTTTCAGA +
Preference number: 4 (lower is better)
Translates to: IPAPERLPSPLPHMELRLNVQGL*VLFVFR
Trigger: TCTGAAAACGAAAAGCACTCACAGTCCTTGAACATT...CAGACGGAGTTCCATGTGGGGCAGTGGTGAGGGCAGACGCTCTGGGGCTGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000477565.3
CDS-3UTR TCA 90 bp TTCCTGATGCTCCTGGTAGAACTCCCAGGAAAGGTCGCTCATTGGGTCACGTGTTCTGGGGCTACAGCTTaGAAGGCCTACAGAGGCTCT +
Preference number: 4 (lower is better)
Translates to: FLMLLVELPGKVAHWVTCSGATA*KAYRGS
Trigger: AGAGCCTCTGTAGGCCTTTCAAGCTGTAGCCCCAGA...ACACGTGACCCAATGAGCGACCTTTCCTGGGAGTTCTACCAGGAGCATCAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488252.6
CDS-3UTR GCA 90 bp CCCGCAGTGTTCTTCACAGCGCATCTGACATGCTCTTGTCTGCCATGTTTACCTGGTTCTTCACGGCGCTaGAGGCGTACTCCACAGTGT +
Preference number: 4 (lower is better)
Translates to: PAVFFTAHLTCSCLPCLPGSSRR*RRTPQC
Trigger: ACACTGTGGAGTACGCCTGCAGCGCCGTGAAGAACC...AGGTAAACATGGCAGACAAGAGCATGTCAGATGCGCTGTGAAGAACACTGCGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477565.3
CDS-3UTR GCA 90 bp AAGCCTTCTCGGTGCTTCTCGAACACTCCCAGGGATCCCAGCCCCAGAGCGTCTACAGCGCATCTGACATaGTCTTGTCTGCCATGTTTA +
Preference number: 4 (lower is better)
Translates to: KPSRCFSNTPRDPSPRASTAHLT*SCLPCL
Trigger: TAAACATGGCAGACAAGAGCATGTCAGATGCGCTGT...AGACGCTCTGGGGCTGGGATCCCTGGGAGTGTTCGAGAAGCACCGAGAAGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477565.3
CDS-3UTR CCA 90 bp TCAACCTTCCTGATGCTCCTGGTAGAACTCCCAGGAAAGGTCGCTCATTGGGTCACTCCACAGTGTAGATaGCTCCCTGGCTCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: STFLMLLVELPGKVAHWVTPQCR*LPGSAP
Trigger: AGGAGCAGAGCCAGGGAGCCATCTACACTGTGGAGT...GACCCAATGAGCGACCTTTCCTGGGAGTTCTACCAGGAGCATCAGGAAGGTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462790.8
ENST00000488252.6
ENST00000588208.6
CDS-3UTR CCA 90 bp GAAACTGAAGAAATGAAATTGGCTAGTGTCAGGTACAGTTGGATCCAGGGCTCCGGTTCCTCCGGGCTGTaGCCCTGGGCACTGGCATTC +
Preference number: 4 (lower is better)
Translates to: ETEEMKLASVRYSWIQGSGSSGL*PWALAF
Trigger: GAATGCCAGTGCCCAGGGCCACAGCCCGGAGGAACC...GGAGCCCTGGATCCAACTGTACCTGACACTAGCCAATTTCATTTCTTCAGTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462790.8
ENST00000488252.6
ENST00000585679.1
ENST00000588208.6
CDS-3UTR CCA 90 bp ATGCATCAACTGCCAGAGGTACTCAGTAAATGCTTGCTGCCTGTGGTGTCCAGTCAAGGGAGCTCTGATTaGCCAGGCCGAGGTGCCACA +
Preference number: 4 (lower is better)
Translates to: MHQLPEVLSKCLLPVVSSQGSSD*PGRGAT
Trigger: TGTGGCACCTCGGCCTGGCCAATCAGAGCTCCCTTG...ACTGGACACCACAGGCAGCAAGCATTTACTGAGTACCTCTGGCAGTTGATGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488252.6
CDS-3UTR CCA 90 bp GTAGAACTCCCAGGAAAGGTCGCTCATTGGGTCACGTGTCCATCTCAAACCAATAGAGAGAGAGGCTCGTaGCTACCCTCGGCACTGACC +
Preference number: 4 (lower is better)
Translates to: VELPGKVAHWVTCPSQTNRERGS*LPSALT
Trigger: GGTCAGTGCCGAGGGTAGCCACGAGCCTCTCTCTCT...ATTGGTTTGAGATGGACACGTGACCCAATGAGCGACCTTTCCTGGGAGTTCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488252.6
CDS-3UTR CCA 90 bp TTCCCATACACCCAGCTCAACCTTCCTGATGCTCCTGGTAGAACTCCCAGGAAAGCCAAGCGGGCGGGTTaGTTAGTTCAGAGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: FPYTQLNLPDAPGRTPRKAKRAG*LVQSRE
Trigger: CTCTCTGCTCTGAACTAACCAACCCGCCCGCTTGGC...TTTCCTGGGAGTTCTACCAGGAGCATCAGGAAGGTTGAGCTGGGTGTATGGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488252.6
CDS-3UTR CCA 90 bp CTCAACCTTCCTGATGCTCCTGGTAGAACTCCCAGGAAAGGTCGCTCATTGGGTAGAGAGTGGGAGAGATaGGCTGACATGGTCCCTGAG +
Preference number: 4 (lower is better)
Translates to: LNLPDAPGRTPRKGRSLGREWER*ADMVPE
Trigger: CTCAGGGACCATGTCAGCCCATCTCTCCCACTCTCT...ACCCAATGAGCGACCTTTCCTGGGAGTTCTACCAGGAGCATCAGGAAGGTTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488252.6
CDS-3UTR CCA 90 bp ACCCAGCTCAACCTTCCTGATGCTCCTGGTAGAACTCCCAGGAAAGGTCGCTCATCTCTGGGACTAGCATaGGGCCTATGGCCTGGAAAA +
Preference number: 4 (lower is better)
Translates to: TQLNLPDAPGRTPRKGRSSLGLA*GLWPGK
Trigger: TTTTCCAGGCCATAGGCCCCATGCTAGTCCCAGAGA...TGAGCGACCTTTCCTGGGAGTTCTACCAGGAGCATCAGGAAGGTTGAGCTGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488252.6
CDS-3UTR CCA 90 bp CGAATGTCCAACTCAGCCTGTAGAGAAGGTGCAGTCCAGCCTTCCTTATCCAGAGACAATCACAGTGCCTaGCCAATAGGCAGGGGCTCG +
Preference number: 4 (lower is better)
Translates to: RMSNSACREGAVQPSLSRDNHSA*PIGRGS
Trigger: CGAGCCCCTGCCTATTGGCCAGGCACTGTGATTGTC...TCTGGATAAGGAAGGCTGGACTGCACCTTCTCTACAGGCTGAGTTGGACATTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488252.6
CDS-3UTR CCA 90 bp GTAGATCTGCGAATGTCCAACTCAGCCTGTAGAGAAGGTGCAGTCCAGCCTTCCGGCTTCCATGGCACATaGCACCGAGGACAATCACAG +
Preference number: 4 (lower is better)
Translates to: VDLRMSNSACREGAVQPSGFHGT*HRGQSQ
Trigger: CTGTGATTGTCCTCGGTGCCATGTGCCATGGAAGCC...GGAAGGCTGGACTGCACCTTCTCTACAGGCTGAGTTGGACATTCGCAGATCTAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488252.6
CDS-3UTR TCA 90 bp CATGAAACTGAAGAAATGAAATTGGCTAGTGTCAGGTACAGTTGGATCCAGGGCCTAAGCCTTCCCTGCTaGAACCGGACGCCGCACGGC +
Preference number: 4 (lower is better)
Translates to: HETEEMKLASVRYSWIQGLSLPC*NRTPHG
Trigger: GCCGTGCGGCGTCCGGTTTCAGCAGGGAAGGCTTAG...GCCCTGGATCCAACTGTACCTGACACTAGCCAATTTCATTTCTTCAGTTTCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488252.6
CDS-3UTR TCA 90 bp TGTCGTATGTCTCCTTGTGAGCCTGTCTGTCTCGGTCACTGCTATGTCCCCAGTTCGTATGTCTCCTTGTaGGCCTGTCTGTCTCGGTCA +
Preference number: 4 (lower is better)
Translates to: CRMSPCEPVCLGHCYVPSSYVSL*ACLSRS
Trigger: TGACCGAGACAGACAGGCTCACAAGGAGACATACGA...ACTGGGGACATAGCAGTGACCGAGACAGACAGGCTCACAAGGAGACATACGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477565.3
CDS-3UTR GCA 90 bp TGCGAATGTCCAACTCAGCCTGTAGAGAAGGTGCAGTCCAGCCTTCCTTATCCAGGAAAATCTGACCCCTaGTGCCAACAGTCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: CECPTQPVEKVQSSLPYPGKSDP*CQQSWP
Trigger: TGGCCAGGACTGTTGGCAGCAGGGGTCAGATTTTCC...TGGATAAGGAAGGCTGGACTGCACCTTCTCTACAGGCTGAGTTGGACATTCGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488252.6
CDS-3UTR CCA 90 bp CCCGCAGTGTTCTTCACAGCGCATCTGACATGCTCTTGTCTGCCATGTTTACCTGAAGGGACCTTGTTGTaGAACGGGACGGCCAAGGTA +
Preference number: 4 (lower is better)
Translates to: PAVFFTAHLTCSCLPCLPEGTLL*NGTAKV
Trigger: TACCTTGGCCGTCCCGTTCCACAACAAGGTCCCTTC...AGGTAAACATGGCAGACAAGAGCATGTCAGATGCGCTGTGAAGAACACTGCGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477565.3
CDS-3UTR CCA 90 bp TTCCCATACACCCAGCTCAACCTTCCTGATGCTCCTGGTAGAACTCCCAGGAAAACTCCACAGTGTAGATaGCTCCCTGGCTCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: FPYTQLNLPDAPGRTPRKTPQCR*LPGSAP
Trigger: AGGAGCAGAGCCAGGGAGCCATCTACACTGTGGAGT...TTTCCTGGGAGTTCTACCAGGAGCATCAGGAAGGTTGAGCTGGGTGTATGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462790.8
ENST00000488252.6
ENST00000588208.6
CDS-3UTR CCA 90 bp TGGTTCCCATACACCCAGCTCAACCTTCCTGATGCTCCTGGTAGAACTCCCAGGAGTGTCAGGTACAGTTaGATCCAGGGCTCCACACAA +
Preference number: 4 (lower is better)
Translates to: WFPYTQLNLPDAPGRTPRSVRYS*IQGSTQ
Trigger: TTGTGTGGAGCCCTGGATCCAACTGTACCTGACACT...CCTGGGAGTTCTACCAGGAGCATCAGGAAGGTTGAGCTGGGTGTATGGGAACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462790.8
ENST00000488252.6
ENST00000585679.1
ENST00000588208.6
CDS-3UTR CCA 90 bp GGCAGAATGCAGGTTGGGAGGGTAGATCTGCGAATGTCCAACTCAGCCTGTAGAACTGGCCTCAACGGATaGGCCACCCACAAATGTGAA +
Preference number: 4 (lower is better)
Translates to: GRMQVGRVDLRMSNSACRTGLNG*ATHKCE
Trigger: TTCACATTTGTGGGTGGCCCATCCGTTGAGGCCAGT...TCTACAGGCTGAGTTGGACATTCGCAGATCTACCCTCCCAACCTGCATTCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488252.6
3UTR CAA 72 bp CCCCGCAGTGTTCTTCACAGCGCATCTGACATGCTCTaGTCTGCCATGTTTACCTGGTTGTCGTATGTCTCC +
Preference number: 4 (lower is better)
Translates to: PRSVLHSASDML*SAMFTWLSYVS
Trigger: GGAGACATACGACAACCAGGTAAACATGGCAGACAAGAGCATGTCAGATGCGCTGTGAAGAACACTGCGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477565.3
CDS-3UTR GCA 90 bp TGCGAATGTCCAACTCAGCCTGTAGAGAAGGTGCAGTCCAGCCTTCCTTATCCAAAAAAGCCTCTGAGATaGGGCATGAGGCTGGCGGTT +
Preference number: 4 (lower is better)
Translates to: CECPTQPVEKVQSSLPYPKKPLR*GMRLAV
Trigger: AACCGCCAGCCTCATGCCGCATCTCAGAGGCTTTTT...TGGATAAGGAAGGCTGGACTGCACCTTCTCTACAGGCTGAGTTGGACATTCGCA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000488252.6
CDS-3UTR CCA 90 bp GCAGTGTTCTTCACAGCGCATCTGACATGCTCTTGTCTGCCATGTTTACCTGGTACTCCACAGTGTAGATaGCTCCCTGGCTCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: AVFFTAHLTCSCLPCLPGTPQCR*LPGSAP
Trigger: AGGAGCAGAGCCAGGGAGCCATCTACACTGTGGAGT...ACCAGGTAAACATGGCAGACAAGAGCATGTCAGATGCGCTGTGAAGAACACTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477565.3
CDS-3UTR CCA 90 bp GGCAGAATGCAGGTTGGGAGGGTAGATCTGCGAATGTCCAACTCAGCCTGTAGAAGGCAGAATGCAGGTTaGGAGGGTAGATCTGCGAAT +
Preference number: 4 (lower is better)
Translates to: GRMQVGRVDLRMSNSACRRQNAG*EGRSAN
Trigger: ATTCGCAGATCTACCCTCCCAACCTGCATTCTGCCT...TCTACAGGCTGAGTTGGACATTCGCAGATCTACCCTCCCAACCTGCATTCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462790.8
ENST00000488252.6
ENST00000585679.1
CDS-3UTR CCA 90 bp AGGGTAGATCTGCGAATGTCCAACTCAGCCTGTAGAGAAGGTGCAGTCCAGCCTAGTGTCAGGTACAGTTaGATCCAGGGCTCCACACAA +
Preference number: 4 (lower is better)
Translates to: RVDLRMSNSACREGAVQPSVRYS*IQGSTQ
Trigger: TTGTGTGGAGCCCTGGATCCAACTGTACCTGACACT...AGGCTGGACTGCACCTTCTCTACAGGCTGAGTTGGACATTCGCAGATCTACCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462790.8
ENST00000488252.6
ENST00000585679.1
CDS-3UTR CCA 90 bp TCAACCTTCCTGATGCTCCTGGTAGAACTCCCAGGAAAGGTCGCTCATTGGGTCGTGAGAAACCCCAAGTaGTTAGACAAGCAGGTGCCT +
Preference number: 4 (lower is better)
Translates to: STFLMLLVELPGKVAHWVVRNPK*LDKQVP
Trigger: AGGCACCTGCTTGTCTAACCACTTGGGGTTTCTCAC...GACCCAATGAGCGACCTTTCCTGGGAGTTCTACCAGGAGCATCAGGAAGGTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488252.6
CDS-3UTR CCA 90 bp GAAACTGAAGAAATGAAATTGGCTAGTGTCAGGTACAGTTGGATCCAGGGCTCCCCCGGGCTGGCCTGCTaGAGAGGCCATGAGGAAAAT +
Preference number: 4 (lower is better)
Translates to: ETEEMKLASVRYSWIQGSPGLAC*RGHEEN
Trigger: ATTTTCCTCATGGCCTCTCCAGCAGGCCAGCCCGGG...GGAGCCCTGGATCCAACTGTACCTGACACTAGCCAATTTCATTTCTTCAGTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488252.6
CDS-3UTR CCA 90 bp TCCCATACACCCAGCTCAACCTTCCTGATGCTCCTGGTAGAACTCCCAGGAAAGCTGCAGGGACAAACGTaGATGAGACACAGAGCAATC +
Preference number: 4 (lower is better)
Translates to: SHTPSSTFLMLLVELPGKLQGQT*MRHRAI
Trigger: GATTGCTCTGTGTCTCATCCACGTTTGTCCCTGCAG...CTTTCCTGGGAGTTCTACCAGGAGCATCAGGAAGGTTGAGCTGGGTGTATGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488252.6
CDS-3UTR TCA 90 bp CATGAAACTGAAGAAATGAAATTGGCTAGTGTCAGGTACAGTTGGATCCAGGGCGTGGGCGTTGCTGCTTaGGGCAGAATGCAGGTTGGG +
Preference number: 4 (lower is better)
Translates to: HETEEMKLASVRYSWIQGVGVAA*GRMQVG
Trigger: CCCAACCTGCATTCTGCCTCAAGCAGCAACGCCCAC...GCCCTGGATCCAACTGTACCTGACACTAGCCAATTTCATTTCTTCAGTTTCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462790.8
ENST00000488252.6
ENST00000585679.1
CDS-3UTR TCA 90 bp CTGCCTGCGTCTGCCCATCACAGATATAGAATGGTGACACATCAGATCTTTCCTGGCCACCCACAAATGTaGAACCAGCACTCTGCATGG +
Preference number: 4 (lower is better)
Translates to: LPASAHHRYRMVTHQIFPGHPQM*NQHSAW
Trigger: CCATGCAGAGTGCTGGTTTCACATTTGTGGGTGGCC...AGGAAAGATCTGATGTGTCACCATTCTATATCTGTGATGGGCAGACGCAGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488252.6
CDS-3UTR GCA 90 bp CAGCTCAACCTTCCTGATGCTCCTGGTAGAACTCCCAGGAAAGGTCGCTCATTGGGTACTCAGGAAGTATaGATCAACTGCCAGAGGTAC +
Preference number: 4 (lower is better)
Translates to: QLNLPDAPGRTPRKGRSLGTQEV*INCQRY
Trigger: GTACCTCTGGCAGTTGATGCATACTTCCTGAGTACC...CAATGAGCGACCTTTCCTGGGAGTTCTACCAGGAGCATCAGGAAGGTTGAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488252.6
CDS-3UTR CCA 90 bp CTGGTAGAACTCCCAGGAAAGGTCGCTCATTGGGTCACGTGTCCATCTCAAACCAGGATAGAGGAAATGTaGGCTCCCTTCTCTGTCTTG +
Preference number: 4 (lower is better)
Translates to: LVELPGKVAHWVTCPSQTRIEEM*APFSVL
Trigger: CAAGACAGAGAAGGGAGCCCACATTTCCTCTATCCT...GGTTTGAGATGGACACGTGACCCAATGAGCGACCTTTCCTGGGAGTTCTACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488252.6
3UTR CAA 72 bp GATGCTCCTGGTAGAACTCCCAGGAAAGGTCGCTCATaGGGTCACGTGTCCATCTCAAACCAATCACTAGGA +
Preference number: 4 (lower is better)
Translates to: DAPGRTPRKGRS*GHVSISNQSLG
Trigger: TCCTAGTGATTGGTTTGAGATGGACACGTGACCCAATGAGCGACCTTTCCTGGGAGTTCTACCAGGAGCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462790.8
ENST00000488252.6
ENST00000585679.1
ENST00000588208.6
CDS-3UTR TCA 90 bp CCCGCAGTGTTCTTCACAGCGCATCTGACATGCTCTTGTCTGCCATGTTTACCTTTGCTTATAAGCCTTTaGGACCGCAGAAGGGACCTT +
Preference number: 4 (lower is better)
Translates to: PAVFFTAHLTCSCLPCLPLLISL*DRRRDL
Trigger: AAGGTCCCTTCTGCGGTCTCAAAGGCTTATAAGCAA...AGGTAAACATGGCAGACAAGAGCATGTCAGATGCGCTGTGAAGAACACTGCGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477565.3
CDS-3UTR TCA 90 bp AGAACTCCCAGGAAAGGTCGCTCATTGGGTCACGTGTCCATCTCAAACCAATCAACCCTCTTGGTCACCTaGGAGCCACCTTTACAGAAA +
Preference number: 4 (lower is better)
Translates to: RTPRKGRSLGHVSISNQSTLLVT*EPPLQK
Trigger: TTTCTGTAAAGGTGGCTCTCAGGTGACCAAGAGGGT...TGATTGGTTTGAGATGGACACGTGACCCAATGAGCGACCTTTCCTGGGAGTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488252.6
CDS-3UTR GCA 90 bp CATGAAACTGAAGAAATGAAATTGGCTAGTGTCAGGTACAGTTGGATCCAGGGCGGTTCTTCACGGCGCTaGAGGCGTACTCCACAGTGT +
Preference number: 4 (lower is better)
Translates to: HETEEMKLASVRYSWIQGGSSRR*RRTPQC
Trigger: ACACTGTGGAGTACGCCTGCAGCGCCGTGAAGAACC...GCCCTGGATCCAACTGTACCTGACACTAGCCAATTTCATTTCTTCAGTTTCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462790.8
ENST00000488252.6
ENST00000588208.6
CDS-3UTR CCA 90 bp GTCCATGAAACTGAAGAAATGAAATTGGCTAGTGTCAGGTACAGTTGGATCCAGCAAGGGAGCTCTGATTaGCCAGGCCGAGGTGCCACA +
Preference number: 4 (lower is better)
Translates to: VHETEEMKLASVRYSWIQQGSSD*PGRGAT
Trigger: TGTGGCACCTCGGCCTGGCCAATCAGAGCTCCCTTG...CTGGATCCAACTGTACCTGACACTAGCCAATTTCATTTCTTCAGTTTCATGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462790.8
ENST00000488252.6
ENST00000585679.1
CDS-3UTR CCA 90 bp AGAACTCCCAGGAAAGGTCGCTCATTGGGTCACGTGTCCATCTCAAACCAATCAAGTGTCAGGTACAGTTaGATCCAGGGCTCCACACAA +
Preference number: 4 (lower is better)
Translates to: RTPRKGRSLGHVSISNQSSVRYS*IQGSTQ
Trigger: TTGTGTGGAGCCCTGGATCCAACTGTACCTGACACT...TGATTGGTTTGAGATGGACACGTGACCCAATGAGCGACCTTTCCTGGGAGTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462790.8
ENST00000488252.6
ENST00000585679.1
ENST00000588208.6
CDS-3UTR TCA 90 bp GTCCATGAAACTGAAGAAATGAAATTGGCTAGTGTCAGGTACAGTTGGATCCAGCTGCTGGAGAGGCCATaGGGAAAATCTGACCCCTGC +
Preference number: 4 (lower is better)
Translates to: VHETEEMKLASVRYSWIQLLERP*GKSDPC
Trigger: GCAGGGGTCAGATTTTCCTCATGGCCTCTCCAGCAG...CTGGATCCAACTGTACCTGACACTAGCCAATTTCATTTCTTCAGTTTCATGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488252.6
CDS-3UTR TCA 90 bp CTTCCTGATGCTCCTGGTAGAACTCCCAGGAAAGGTCGCTCATTGGGTCACGTGATGAAACTGAAGAAATaGAATTGGCTAGTGTCAGGT +
Preference number: 4 (lower is better)
Translates to: LPDAPGRTPRKGRSLGHVMKLKK*NWLVSG
Trigger: ACCTGACACTAGCCAATTTCATTTCTTCAGTTTCAT...CACGTGACCCAATGAGCGACCTTTCCTGGGAGTTCTACCAGGAGCATCAGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462790.8
ENST00000488252.6
ENST00000585679.1
ENST00000588208.6
CDS-3UTR TCA 90 bp TGCTGCTTGAGGCAGAATGCAGGTTGGGAGGGTAGATCTGCGAATGTCCAACTCACAGATATAGAATGGTaGCACATCAGATCTTTCCTG +
Preference number: 4 (lower is better)
Translates to: CCLRQNAGWEGRSANVQLTDIEW*HIRSFL
Trigger: CAGGAAAGATCTGATGTGTCACCATTCTATATCTGT...GAGTTGGACATTCGCAGATCTACCCTCCCAACCTGCATTCTGCCTCAAGCAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488252.6
CDS-3UTR GCA 90 bp ACTCAGGTTATAGATGCCACAGGACAAGAGGAGGTCACCAGACACCAGGACAAATTCAAGGACTGTGAGTaGTTTTCGTTTTCAGACCCC +
Preference number: 4 (lower is better)
Translates to: TQVIDATGQEEVTRHQDKFKDCE*FSFSDP
Trigger: GGGGTCTGAAAACGAAAAGCACTCACAGTCCTTGAA...TTTGTCCTGGTGTCTGGTGACCTCCTCTTGTCCTGTGGCATCTATAACCTGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477565.3
CDS-3UTR GCA 90 bp AGAACTCCCAGGAAAGGTCGCTCATTGGGTCACGTGTCCATCTCAAACCAATCATACTCAGTAAATGCTTaGTGCCTGTGGTGTCCAGTA +
Preference number: 4 (lower is better)
Translates to: RTPRKGRSLGHVSISNQSYSVNA*CLWCPV
Trigger: TACTGGACACCACAGGCAGCAAGCATTTACTGAGTA...TGATTGGTTTGAGATGGACACGTGACCCAATGAGCGACCTTTCCTGGGAGTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488252.6
CDS-3UTR CCA 90 bp GAAACTGAAGAAATGAAATTGGCTAGTGTCAGGTACAGTTGGATCCAGGGCTCCAGTGTCAGGTACAGTTaGATCCAGGGCTCCACACAA +
Preference number: 4 (lower is better)
Translates to: ETEEMKLASVRYSWIQGSSVRYS*IQGSTQ
Trigger: TTGTGTGGAGCCCTGGATCCAACTGTACCTGACACT...GGAGCCCTGGATCCAACTGTACCTGACACTAGCCAATTTCATTTCTTCAGTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462790.8
ENST00000488252.6
ENST00000585679.1
ENST00000588208.6
CDS-3UTR CCA 90 bp GCAGTGTTCTTCACAGCGCATCTGACATGCTCTTGTCTGCCATGTTTACCTGGTTCTGCCATGTTTACCTaGTTGTCGTATGTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: AVFFTAHLTCSCLPCLPGSAMFT*LSYVSL
Trigger: CAAGGAGACATACGACAACCAGGTAAACATGGCAGA...ACCAGGTAAACATGGCAGACAAGAGCATGTCAGATGCGCTGTGAAGAACACTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477565.3
CDS-3UTR TCA 90 bp CTGGTAGAACTCCCAGGAAAGGTCGCTCATTGGGTCACGTGTCCATCTCAAACCATGAAACTGAAGAAATaGAATTGGCTAGTGTCAGGT +
Preference number: 4 (lower is better)
Translates to: LVELPGKVAHWVTCPSQTMKLKK*NWLVSG
Trigger: ACCTGACACTAGCCAATTTCATTTCTTCAGTTTCAT...GGTTTGAGATGGACACGTGACCCAATGAGCGACCTTTCCTGGGAGTTCTACCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462790.8
ENST00000488252.6
ENST00000585679.1
ENST00000588208.6
CDS-3UTR TCA 90 bp TTCCCATACACCCAGCTCAACCTTCCTGATGCTCCTGGTAGAACTCCCAGGAAAATGAAACTGAAGAAATaGAATTGGCTAGTGTCAGGT +
Preference number: 4 (lower is better)
Translates to: FPYTQLNLPDAPGRTPRKMKLKK*NWLVSG
Trigger: ACCTGACACTAGCCAATTTCATTTCTTCAGTTTCAT...TTTCCTGGGAGTTCTACCAGGAGCATCAGGAAGGTTGAGCTGGGTGTATGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462790.8
ENST00000488252.6
ENST00000585679.1
ENST00000588208.6
CDS-3UTR TCA 90 bp AGAACTCCCAGGAAAGGTCGCTCATTGGGTCACGTGTCCATCTCAAACCAATCAATGAAACTGAAGAAATaGAATTGGCTAGTGTCAGGT +
Preference number: 4 (lower is better)
Translates to: RTPRKGRSLGHVSISNQSMKLKK*NWLVSG
Trigger: ACCTGACACTAGCCAATTTCATTTCTTCAGTTTCAT...TGATTGGTTTGAGATGGACACGTGACCCAATGAGCGACCTTTCCTGGGAGTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462790.8
ENST00000488252.6
ENST00000585679.1
ENST00000588208.6
3UTR CAA 72 bp CATAATTTAGGGGTCCATGAAACTGAAGAAATGAAATaGGCTAGTGTCAGGTACAGTTGGATCCAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: HNLGVHETEEMK*ASVRYSWIQGS
Trigger: GGAGCCCTGGATCCAACTGTACCTGACACTAGCCAATTTCATTTCTTCAGTTTCATGGACCCCTAAATTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000462790.8
ENST00000488252.6
ENST00000585679.1
CDS TCA 90 bp CACCGGAAGCCCGGAGGTTGGGACGCCCGCCTAAGCCTTCCCTGCTaGAACCGGACGCCGCACGGCTCCTGTTCCGGTGTCAGAGGGCCC +
Preference number: 5 (lower is better)
Translates to: HRKPGGWDARLSLPC*NRTPHGSCSGVRGP
Trigger: GGGCCCTCTGACACCGGAACAGGAGCCGTGCGGCGTCCGGTTTCAGCAGGGAAGGCTTAGGCGGGCGTCCCAACCTCCGGGCTTCCGGTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462498.1
ENST00000477565.3
ENST00000488252.6
CDS CCA 90 bp AGAGGCTCGTGGCTACCCTCGGCACTGACCTGGGTTGGCGGAGGCTaGGGGGCCCCGAGTCTCTTCCAGGATCAGGCTGAGGAGGGCGGG +
Preference number: 5 (lower is better)
Translates to: RGSWLPSALTWVGGG*GAPSLFQDQAEEGG
Trigger: CCCGCCCTCCTCAGCCTGATCCTGGAAGAGACTCGGGGCCCCCCAGCCTCCGCCAACCCAGGTCAGTGCCGAGGGTAGCCACGAGCCTCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488252.6
CDS-3UTR CAA 90 bp AGAGAGAGGCTCGTGGCTACCCTCGGCACTGACCTGGGTTGGCGGAGGCTGGGGCGCTGCATGTCTGCCTaGTGCTGGGCCAGCTCGGGG +
Preference number: 5 (lower is better)
Translates to: RERLVATLGTDLGWRRLGRCMSA*CWASSG
Trigger: CCCCGAGCTGGCCCAGCACAAGGCAGACATGCAGCG...CCCCAGCCTCCGCCAACCCAGGTCAGTGCCGAGGGTAGCCACGAGCCTCTCTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488252.6
CDS-3UTR CAA 90 bp CCCTGGCCCCATCTCCCCCAGCTGGCCGGCTCCAGCCACAGAAGCCTTCTCGGTGCTGAGAGACGGTCCTaGCAGCTGGGAGTGGCAGTG +
Preference number: 5 (lower is better)
Translates to: PWPHLPQLAGSSHRSLLGAERRS*QLGVAV
Trigger: CACTGCCACTCCCAGCTGCAAGGACCGTCTCTCAGC...ACCGAGAAGGCTTCTGTGGCTGGAGCCGGCCAGCTGGGGGAGATGGGGCCAGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477565.3
CDS CCA 90 bp GGGGCCAGTGAGAGTCCAGGAGCAGCAAAGCCACTTCTGGACTTCTaGGAACATGGACGGCTGGGCCTGGAGGCTCCGGGCAGGTGCAGG +
Preference number: 5 (lower is better)
Translates to: GASESPGAAKPLLDF*EHGRLGLEAPGRCR
Trigger: CCTGCACCTGCCCGGAGCCTCCAGGCCCAGCCGTCCATGTTCCCAGAAGTCCAGAAGTGGCTTTGCTGCTCCTGGACTCTCACTGGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591566.1
CDS GCA 90 bp CCTGTTCCGGTGTCAGAGGGCCCGCCCTCCCCGCTCCTCAGTCTTTaGGGACAAGAAAGGGGCTGTGTGAGACGCAGGGAAGGAGGCACA +
Preference number: 5 (lower is better)
Translates to: PVPVSEGPPSPLLSL*GQERGCVRRREGGT
Trigger: TGTGCCTCCTTCCCTGCGTCTCACACAGCCCCTTTCTTGTCCGCAAAGACTGAGGAGCGGGGAGGGCGGGCCCTCTGACACCGGAACAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462498.1
ENST00000477565.3
ENST00000488252.6
CDS CCA 90 bp CTTGGTGGTCAGAGGTCCGGGTGGGAATCCTGGCATTTCTGGGCGTaGGCGATGACCCTGAGCTGGCTGCCTTACCTCTCGGGGCCTCAG +
Preference number: 5 (lower is better)
Translates to: LGGQRSGWESWHFWA*AMTLSWLPYLSGPQ
Trigger: CTGAGGCCCCGAGAGGTAAGGCAGCCAGCTCAGGGTCATCGCCCACGCCCAGAAATGCCAGGATTCCCACCCGGACCTCTGACCACCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591566.1
CDS CCA 90 bp GTGGAGCTTGGTGGTCAGAGGTCCGGGTGGGAATCCTGGCATTTCTaGGCGTGGGCGATGACCCTGAGCTGGCTGCCTTACCTCTCGGGG +
Preference number: 5 (lower is better)
Translates to: VELGGQRSGWESWHF*AWAMTLSWLPYLSG
Trigger: CCCCGAGAGGTAAGGCAGCCAGCTCAGGGTCATCGCCCACGCCCAGAAATGCCAGGATTCCCACCCGGACCTCTGACCACCAAGCTCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591566.1
CDS CCA 90 bp ACCCCGGGCCAGACTAAGGTGGAGCTTGGTGGTCAGAGGTCCGGGTaGGAATCCTGGCATTTCTGGGCGTGGGCGATGACCCTGAGCTGG +
Preference number: 5 (lower is better)
Translates to: TPGQTKVELGGQRSG*ESWHFWAWAMTLSW
Trigger: CCAGCTCAGGGTCATCGCCCACGCCCAGAAATGCCAGGATTCCCACCCGGACCTCTGACCACCAAGCTCCACCTTAGTCTGGCCCGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591566.1
CDS-3UTR CAA 90 bp AAGCCTTCTCGGTGCTTCTCGAACACTCCCAGGGATCCCAGCCCCAGAGCGTCTCGCTGCATGTCTGCCTaGTGCTGGGCCAGCTCGGGG +
Preference number: 5 (lower is better)
Translates to: KPSRCFSNTPRDPSPRASRCMSA*CWASSG
Trigger: CCCCGAGCTGGCCCAGCACAAGGCAGACATGCAGCG...AGACGCTCTGGGGCTGGGATCCCTGGGAGTGTTCGAGAAGCACCGAGAAGGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477565.3
CDS GCA 90 bp AGGTGCAGGAGGAATGCTGGCCACACTCGTTCAGTCTTCAGTCTCTaGCTGGCCCAGCTTCAGTCAGGCTGGGGAGCAGGGGCAAGGGCC +
Preference number: 5 (lower is better)
Translates to: RCRRNAGHTRSVFSL*LAQLQSGWGAGARA
Trigger: GGCCCTTGCCCCTGCTCCCCAGCCTGACTGAAGCTGGGCCAGGCAGAGACTGAAGACTGAACGAGTGTGGCCAGCATTCCTCCTGCACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591566.1
CDS CCA 90 bp GTGTCCATCTCAAACCAATCACTAGGAACCTGGGTTGGCGGAGGCTaGGGGGCCCCGAGTCTCTTCCAGGATCAGGCTGAGGAGGGCGGG +
Preference number: 5 (lower is better)
Translates to: VSISNQSLGTWVGGG*GAPSLFQDQAEEGG
Trigger: CCCGCCCTCCTCAGCCTGATCCTGGAAGAGACTCGGGGCCCCCCAGCCTCCGCCAACCCAGGTTCCTAGTGATTGGTTTGAGATGGACAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588208.6
CDS CCA 90 bp CAGCAAAGCCACTTCTGGACTTCTGGGAACATGGACGGCTGGGCCTaGAGGCTCCGGGCAGGTGCAGGAGGAATGCTGGCCACACTCGTT +
Preference number: 5 (lower is better)
Translates to: QQSHFWTSGNMDGWA*RLRAGAGGMLATLV
Trigger: AACGAGTGTGGCCAGCATTCCTCCTGCACCTGCCCGGAGCCTCCAGGCCCAGCCGTCCATGTTCCCAGAAGTCCAGAAGTGGCTTTGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591566.1
CDS-3UTR CAA 90 bp CCACATCCACCACTGGAACTAGGGGTGGCTTCTCCATGTGGCCTGAGCCTGGGGGGTGGGCGTTGCTGCTaGAGGCAGAATGCAGGTTGG +
Preference number: 5 (lower is better)
Translates to: PHPPLELGVASPCGLSLGGGRCC*RQNAGW
Trigger: CCAACCTGCATTCTGCCTCAAGCAGCAACGCCCACC...CCCCAGGCTCAGGCCACATGGAGAAGCCACCCCTAGTTCCAGTGGTGGATGTGG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000462790.8
ENST00000488252.6
ENST00000585679.1
CDS-3UTR CAA 90 bp AAGCCTTCTCGGTGCTTCTCGAACACTCCCAGGGATCCCAGCCCCAGAGCGTCTGCAGAAGGGACCTTGTaGTGGAACGGGACGGCCAAG +
Preference number: 5 (lower is better)
Translates to: KPSRCFSNTPRDPSPRASAEGTL*WNGTAK
Trigger: CTTGGCCGTCCCGTTCCACAACAAGGTCCCTTCTGC...AGACGCTCTGGGGCTGGGATCCCTGGGAGTGTTCGAGAAGCACCGAGAAGGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477565.3
CDS-3UTR CAA 90 bp CTCAACCTTCCTGATGCTCCTGGTAGAACTCCCAGGAAAGGTCGCTCATTGGGTCCGGAAGCCCGGAGGTaGGGACGCCCGCCTAAGCCT +
Preference number: 5 (lower is better)
Translates to: LNLPDAPGRTPRKGRSLGPEARR*GRPPKP
Trigger: AGGCTTAGGCGGGCGTCCCAACCTCCGGGCTTCCGG...ACCCAATGAGCGACCTTTCCTGGGAGTTCTACCAGGAGCATCAGGAAGGTTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488252.6
CDS-3UTR CAA 90 bp CCTGGTTCCCATACACCCAGCTCAACCTTCCTGATGCTCCTGGTAGAACTCCCACGCTGCATGTCTGCCTaGTGCTGGGCCAGCTCGGGG +
Preference number: 5 (lower is better)
Translates to: PGSHTPSSTFLMLLVELPRCMSA*CWASSG
Trigger: CCCCGAGCTGGCCCAGCACAAGGCAGACATGCAGCG...TGGGAGTTCTACCAGGAGCATCAGGAAGGTTGAGCTGGGTGTATGGGAACCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462790.8
ENST00000488252.6
CDS-3UTR CAA 90 bp ATCCCAGCCCCAGAGCGTCTGCCCTCACCACTGCCCCACATGGAACTCCGTCTGCTTGCTTATAAGCCTTaGAGACCGCAGAAGGGACCT +
Preference number: 5 (lower is better)
Translates to: IPAPERLPSPLPHMELRLLAYKP*RPQKGP
Trigger: AGGTCCCTTCTGCGGTCTCAAAGGCTTATAAGCAAG...CAGACGGAGTTCCATGTGGGGCAGTGGTGAGGGCAGACGCTCTGGGGCTGGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477565.3
CDS-3UTR CAA 90 bp GCAGTGTTCTTCACAGCGCATCTGACATGCTCTTGTCTGCCATGTTTACCTGGTCCGGAAGCCCGGAGGTaGGGACGCCCGCCTAAGCCT +
Preference number: 5 (lower is better)
Translates to: AVFFTAHLTCSCLPCLPGPEARR*GRPPKP
Trigger: AGGCTTAGGCGGGCGTCCCAACCTCCGGGCTTCCGG...ACCAGGTAAACATGGCAGACAAGAGCATGTCAGATGCGCTGTGAAGAACACTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477565.3
CDS-3UTR CAA 90 bp CCTATGGCCTGGAAAAGAGAGAGGAAGGTGGTGGAGAGAGAGTGGGAGAGATGGCAGCTCACGCTGCACTaGTGCGGTCCTCTCCCATCT +
Preference number: 5 (lower is better)
Translates to: PMAWKRERKVVEREWERWQLTLH*CGPLPS
Trigger: AGATGGGAGAGGACCGCACAAGTGCAGCGTGAGCTG...CCATCTCTCCCACTCTCTCTCCACCACCTTCCTCTCTCTTTTCCAGGCCATAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488252.6
CDS-3UTR CAA 90 bp TGTCGTATGTCTCCTTGTGAGCCTGTCTGTCTCGGTCACTGCTATGTCCCCAGTCCCGCTCCTCAGTCTTaGCGGACAAGAAAGGGGCTG +
Preference number: 5 (lower is better)
Translates to: CRMSPCEPVCLGHCYVPSPAPQS*RTRKGL
Trigger: CAGCCCCTTTCTTGTCCGCAAAGACTGAGGAGCGGG...ACTGGGGACATAGCAGTGACCGAGACAGACAGGCTCACAAGGAGACATACGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477565.3
CDS-3UTR CAA 90 bp TCAACCTTCCTGATGCTCCTGGTAGAACTCCCAGGAAAGGTCGCTCATTGGGTCGGTGGGCGTTGCTGCTaGAGGCAGAATGCAGGTTGG +
Preference number: 5 (lower is better)
Translates to: STFLMLLVELPGKVAHWVGGRCC*RQNAGW
Trigger: CCAACCTGCATTCTGCCTCAAGCAGCAACGCCCACC...GACCCAATGAGCGACCTTTCCTGGGAGTTCTACCAGGAGCATCAGGAAGGTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462790.8
ENST00000488252.6
ENST00000585679.1
CDS-3UTR CAA 90 bp GCAGTGTTCTTCACAGCGCATCTGACATGCTCTTGTCTGCCATGTTTACCTGGTACCGCAGAAGGGACCTaGTTGTGGAACGGGACGGCC +
Preference number: 5 (lower is better)
Translates to: AVFFTAHLTCSCLPCLPGTAEGT*LWNGTA
Trigger: GGCCGTCCCGTTCCACAACAAGGTCCCTTCTGCGGT...ACCAGGTAAACATGGCAGACAAGAGCATGTCAGATGCGCTGTGAAGAACACTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477565.3
CDS-3UTR CAA 90 bp CTCCTGGTAGAACTCCCAGGAAAGGTCGCTCATTGGGTCACGTGTCCATCTCAATGCCAAGCGGGCGGGTaGGTTAGTTCAGAGCAGAGA +
Preference number: 5 (lower is better)
Translates to: LLVELPGKVAHWVTCPSQCQAGG*VSSEQR
Trigger: TCTCTGCTCTGAACTAACCAACCCGCCCGCTTGGCA...TTGAGATGGACACGTGACCCAATGAGCGACCTTTCCTGGGAGTTCTACCAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488252.6
CDS-3UTR CAA 90 bp GGCAGAATGCAGGTTGGGAGGGTAGATCTGCGAATGTCCAACTCAGCCTGTAGACTCTGGGGCTACAGCTaGAAAGGCCTACAGAGGCTC +
Preference number: 5 (lower is better)
Translates to: GRMQVGRVDLRMSNSACRLWGYS*KGLQRL
Trigger: GAGCCTCTGTAGGCCTTTCAAGCTGTAGCCCCAGAG...TCTACAGGCTGAGTTGGACATTCGCAGATCTACCCTCCCAACCTGCATTCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488252.6
CDS-3UTR CAA 90 bp ACTCAGGTTATAGATGCCACAGGACAAGAGGAGGTCACCAGACACCAGGACAAAGGCTTAAAGCCTCCCTaGGCTCTGGGTCCTGGGACA +
Preference number: 5 (lower is better)
Translates to: TQVIDATGQEEVTRHQDKGLKPP*ALGPGT
Trigger: TGTCCCAGGACCCAGAGCCAAGGGAGGCTTTAAGCC...TTTGTCCTGGTGTCTGGTGACCTCCTCTTGTCCTGTGGCATCTATAACCTGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477565.3
CDS CCA 90 bp CATAATCAGGATTATTTTGATGGCAGTTATTGGTCCAAGGGTCGATaGGGGGCCAGTGAGAGTCCAGGAGCAGCAAAGCCACTTCTGGAC +
Preference number: 5 (lower is better)
Translates to: HNQDYFDGSYWSKGR*GASESPGAAKPLLD
Trigger: GTCCAGAAGTGGCTTTGCTGCTCCTGGACTCTCACTGGCCCCCCATCGACCCTTGGACCAATAACTGCCATCAAAATAATCCTGATTATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591566.1
CDS-3UTR CAA 90 bp CATCTGACATGCTCTTGTCTGCCATGTTTACCTGGTTGTCGTATGTCTCCTTGTTCCTTGAGAGACGAGTaGGGGGAGTCCTCCACGCAT +
Preference number: 5 (lower is better)
Translates to: HLTCSCLPCLPGCRMSPCSLRDE*GESSTH
Trigger: ATGCGTGGAGGACTCCCCCAACTCGTCTCTCAAGGA...ACAAGGAGACATACGACAACCAGGTAAACATGGCAGACAAGAGCATGTCAGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477565.3
CDS-3UTR CAA 90 bp CCCAGCTCAACCTTCCTGATGCTCCTGGTAGAACTCCCAGGAAAGGTCGCTCATACTGAAGAAATGAAATaGGCTAGTGTCAGGTACAGT +
Preference number: 5 (lower is better)
Translates to: PSSTFLMLLVELPGKVAHTEEMK*ASVRYS
Trigger: ACTGTACCTGACACTAGCCAATTTCATTTCTTCAGT...ATGAGCGACCTTTCCTGGGAGTTCTACCAGGAGCATCAGGAAGGTTGAGCTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462790.8
ENST00000488252.6
ENST00000585679.1
ENST00000588208.6
CDS-3UTR CAA 90 bp GCTCCTGGTAGAACTCCCAGGAAAGGTCGCTCATTGGGTCACGTGTCCATCTCAACTGAAGAAATGAAATaGGCTAGTGTCAGGTACAGT +
Preference number: 5 (lower is better)
Translates to: APGRTPRKGRSLGHVSISTEEMK*ASVRYS
Trigger: ACTGTACCTGACACTAGCCAATTTCATTTCTTCAGT...TGAGATGGACACGTGACCCAATGAGCGACCTTTCCTGGGAGTTCTACCAGGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462790.8
ENST00000488252.6
ENST00000585679.1
ENST00000588208.6
CDS-3UTR CAA 90 bp GGCAGAATGCAGGTTGGGAGGGTAGATCTGCGAATGTCCAACTCAGCCTGTAGAACTGAAGAAATGAAATaGGCTAGTGTCAGGTACAGT +
Preference number: 5 (lower is better)
Translates to: GRMQVGRVDLRMSNSACRTEEMK*ASVRYS
Trigger: ACTGTACCTGACACTAGCCAATTTCATTTCTTCAGT...TCTACAGGCTGAGTTGGACATTCGCAGATCTACCCTCCCAACCTGCATTCTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462790.8
ENST00000488252.6
ENST00000585679.1
CDS-3UTR CAA 90 bp CATCTGACATGCTCTTGTCTGCCATGTTTACCTGGTTGTCGTATGTCTCCTTGTGCATCTGACATGCTCTaGTCTGCCATGTTTACCTGG +
Preference number: 5 (lower is better)
Translates to: HLTCSCLPCLPGCRMSPCASDML*SAMFTW
Trigger: CCAGGTAAACATGGCAGACAAGAGCATGTCAGATGC...ACAAGGAGACATACGACAACCAGGTAAACATGGCAGACAAGAGCATGTCAGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477565.3
CDS-3UTR CAA 90 bp GGCAAAAATCATAATTTAGGGGTCCATGAAACTGAAGAAATGAAATTGGCTAGTGGTGGGCGTTGCTGCTaGAGGCAGAATGCAGGTTGG +
Preference number: 5 (lower is better)
Translates to: GKNHNLGVHETEEMKLASGGRCC*RQNAGW
Trigger: CCAACCTGCATTCTGCCTCAAGCAGCAACGCCCACC...ACTAGCCAATTTCATTTCTTCAGTTTCATGGACCCCTAAATTATGATTTTTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000462790.8
ENST00000488252.6
ENST00000585679.1
CDS-3UTR CAA 90 bp CATGAAACTGAAGAAATGAAATTGGCTAGTGTCAGGTACAGTTGGATCCAGGGCACTGAAGAAATGAAATaGGCTAGTGTCAGGTACAGT +
Preference number: 5 (lower is better)
Translates to: HETEEMKLASVRYSWIQGTEEMK*ASVRYS
Trigger: ACTGTACCTGACACTAGCCAATTTCATTTCTTCAGT...GCCCTGGATCCAACTGTACCTGACACTAGCCAATTTCATTTCTTCAGTTTCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000462790.8
ENST00000488252.6
ENST00000585679.1
ENST00000588208.6
CDS CCA 72 bp CTGTGTGAGACGCAGGGAAGGAGGCACACCCGGGGGTaGCGCAGTGAGGAGGGGGCGCGACGGCCAGGAGGC +
Preference number: 6 (lower is better)
Translates to: LCETQGRRHTRG*RSEEGARRPGG
Trigger: GCCTCCTGGCCGTCGCGCCCCCTCCTCACTGCGCCACCCCCGGGTGTGCCTCCTTCCCTGCGTCTCACACAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000462498.1
ENST00000477565.3
ENST00000488252.6
CDS CAA 90 bp GACCGCGGCCGAGCGAACCGGGAAACGGCACCGGAAGCCCGGAGGTaGGGACGCCCGCCTAAGCCTTCCCTGCTGAAACCGGACGCCGCA +
Preference number: 6 (lower is better)
Translates to: DRGRANRETAPEARR*GRPPKPSLLKPDAA
Trigger: TGCGGCGTCCGGTTTCAGCAGGGAAGGCTTAGGCGGGCGTCCCAACCTCCGGGCTTCCGGTGCCGTTTCCCGGTTCGCTCGGCCGCGGTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462498.1
ENST00000477565.3
ENST00000488252.6
CDS CCA 72 bp TGGCGCAGTGAGGAGGGGGCGCGACGGCCAGGAGGCTaGTGGAGCGACACCCAGGCAGGAGAGGGGGAAGAA +
Preference number: 6 (lower is better)
Translates to: WRSEEGARRPGG*WSDTQAGEGEE
Trigger: TTCTTCCCCCTCTCCTGCCTGGGTGTCGCTCCACCAGCCTCCTGGCCGTCGCGCCCCCTCCTCACTGCGCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000462498.1
ENST00000477565.3
ENST00000488252.6
CDS TCA 72 bp CCCGGAGGTTGGGACGCCCGCCTAAGCCTTCCCTGCTaGAACCGGACGCCGCACGGCTCCTGTTCCGGTGTC +
Preference number: 6 (lower is better)
Translates to: PGGWDARLSLPC*NRTPHGSCSGV
Trigger: GACACCGGAACAGGAGCCGTGCGGCGTCCGGTTTCAGCAGGGAAGGCTTAGGCGGGCGTCCCAACCTCCGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462498.1
ENST00000477565.3
ENST00000488252.6
CDS CCA 72 bp TGGCTACCCTCGGCACTGACCTGGGTTGGCGGAGGCTaGGGGGCCCCGAGTCTCTTCCAGGATCAGGCTGAG +
Preference number: 6 (lower is better)
Translates to: WLPSALTWVGGG*GAPSLFQDQAE
Trigger: CTCAGCCTGATCCTGGAAGAGACTCGGGGCCCCCCAGCCTCCGCCAACCCAGGTCAGTGCCGAGGGTAGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488252.6
CDS CAA 72 bp CGAGCGAACCGGGAAACGGCACCGGAAGCCCGGAGGTaGGGACGCCCGCCTAAGCCTTCCCTGCTGAAACCG +
Preference number: 6 (lower is better)
Translates to: RANRETAPEARR*GRPPKPSLLKP
Trigger: CGGTTTCAGCAGGGAAGGCTTAGGCGGGCGTCCCAACCTCCGGGCTTCCGGTGCCGTTTCCCGGTTCGCTCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462498.1
ENST00000477565.3
ENST00000488252.6
CDS CAA 72 bp GGTGTCAGAGGGCCCGCCCTCCCCGCTCCTCAGTCTTaGCGGACAAGAAAGGGGCTGTGTGAGACGCAGGGA +
Preference number: 6 (lower is better)
Translates to: GVRGPALPAPQS*RTRKGLCETQG
Trigger: TCCCTGCGTCTCACACAGCCCCTTTCTTGTCCGCAAAGACTGAGGAGCGGGGAGGGCGGGCCCTCTGACACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462498.1
ENST00000477565.3
ENST00000488252.6
CDS CAA 90 bp TCCTGTTCCGGTGTCAGAGGGCCCGCCCTCCCCGCTCCTCAGTCTTaGCGGACAAGAAAGGGGCTGTGTGAGACGCAGGGAAGGAGGCAC +
Preference number: 6 (lower is better)
Translates to: SCSGVRGPALPAPQS*RTRKGLCETQGRRH
Trigger: GTGCCTCCTTCCCTGCGTCTCACACAGCCCCTTTCTTGTCCGCAAAGACTGAGGAGCGGGGAGGGCGGGCCCTCTGACACCGGAACAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000462498.1
ENST00000477565.3
ENST00000488252.6
CDS CCA 72 bp CAGAGGTCCGGGTGGGAATCCTGGCATTTCTGGGCGTaGGCGATGACCCTGAGCTGGCTGCCTTACCTCTCG +
Preference number: 6 (lower is better)
Translates to: QRSGWESWHFWA*AMTLSWLPYLS
Trigger: CGAGAGGTAAGGCAGCCAGCTCAGGGTCATCGCCCACGCCCAGAAATGCCAGGATTCCCACCCGGACCTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591566.1
CDS CCA 72 bp GGTGGTCAGAGGTCCGGGTGGGAATCCTGGCATTTCTaGGCGTGGGCGATGACCCTGAGCTGGCTGCCTTAC +
Preference number: 6 (lower is better)
Translates to: GGQRSGWESWHF*AWAMTLSWLPY
Trigger: GTAAGGCAGCCAGCTCAGGGTCATCGCCCACGCCCAGAAATGCCAGGATTCCCACCCGGACCTCTGACCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591566.1
CDS TCA 72 bp GAGACAGACCCAAGGCATGAGGCAGCACCTGAGGGATaGCCCCGGGCCAGACTAAGGTGGAGCTTGGTGGTC +
Preference number: 6 (lower is better)
Translates to: ETDPRHEAAPEG*PRARLRWSLVV
Trigger: GACCACCAAGCTCCACCTTAGTCTGGCCCGGGGTCATCCCTCAGGTGCTGCCTCATGCCTTGGGTCTGTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591566.1
CDS CCA 72 bp CAGACTAAGGTGGAGCTTGGTGGTCAGAGGTCCGGGTaGGAATCCTGGCATTTCTGGGCGTGGGCGATGACC +
Preference number: 6 (lower is better)
Translates to: QTKVELGGQRSG*ESWHFWAWAMT
Trigger: GGTCATCGCCCACGCCCAGAAATGCCAGGATTCCCACCCGGACCTCTGACCACCAAGCTCCACCTTAGTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591566.1
CDS CCA 72 bp ATGCTGGCCACACTCGTTCAGTCTTCAGTCTCTGCCTaGCCCAGCTTCAGTCAGGCTGGGGAGCAGGGGCAA +
Preference number: 6 (lower is better)
Translates to: MLATLVQSSVSA*PSFSQAGEQGQ
Trigger: TTGCCCCTGCTCCCCAGCCTGACTGAAGCTGGGCCAGGCAGAGACTGAAGACTGAACGAGTGTGGCCAGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591566.1
CDS CCA 72 bp TCAAACCAATCACTAGGAACCTGGGTTGGCGGAGGCTaGGGGGCCCCGAGTCTCTTCCAGGATCAGGCTGAG +
Preference number: 6 (lower is better)
Translates to: SNQSLGTWVGGG*GAPSLFQDQAE
Trigger: CTCAGCCTGATCCTGGAAGAGACTCGGGGCCCCCCAGCCTCCGCCAACCCAGGTTCCTAGTGATTGGTTTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588208.6
CDS TCA 72 bp GGGCAGTGCTTAAGGTCCTGGGACAGGAGAGGGGGATaGCTTGACCCTGCGAAGGTCACTGATGACCCCAAA +
Preference number: 6 (lower is better)
Translates to: GQCLRSWDRRGG*LDPAKVTDDPK
Trigger: TTTGGGGTCATCAGTGACCTTCGCAGGGTCAAGTCATCCCCCTCTCCTGTCCCAGGACCTTAAGCACTGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591566.1
CDS CAA 72 bp TCCCACCTACTCGGGAGGCTGAAGCGGGATAATCGCTaGAACCTGACAGGCAGAGGTTACACTGAACCGAGA +
Preference number: 6 (lower is better)
Translates to: SHLLGRLKRDNR*NLTGRGYTEPR
Trigger: TCTCGGTTCAGTGTAACCTCTGCCTGTCAGGTTCAAGCGATTATCCCGCTTCAGCCTCCCGAGTAGGTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591566.1
CDS CCA 72 bp GATTATTTTGATGGCAGTTATTGGTCCAAGGGTCGATaGGGGGCCAGTGAGAGTCCAGGAGCAGCAAAGCCA +
Preference number: 6 (lower is better)
Translates to: DYFDGSYWSKGR*GASESPGAAKP
Trigger: TGGCTTTGCTGCTCCTGGACTCTCACTGGCCCCCCATCGACCCTTGGACCAATAACTGCCATCAAAATAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591566.1