Pregenerated sensors for BORCS7 (Homo sapiens)
Ensembl gene IDs: ENSG00000166275Ensembl transcript IDs: ENST00000339834.10, ENST00000369883.3, ENST00000478833.1
Found 52 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | TCACCATGGCACAAACCTCTGCCACAATCACTCATAATAATTCAACTGCCTTCAAGCTTCCCGAGTAGCTaGGATTACAGGCGCCCGCCA | + |
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Preference number: 2 (lower is better) Translates to: SPWHKPLPQSLIIIQLPSSFPSS*DYRRPP Trigger: TGGCGGGCGCCTGTAATCCCAGCTACTCGGGAAGCT...TGAAGGCAGTTGAATTATTATGAGTGATTGTGGCAGAGGTTTGTGCCATGGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339834.10 |
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| 3UTR GCA 72 bp | AAAGAAATTCTAGGAATGCAGGTCAAGGCAAGAGGCTaGAGCTGGCCTGATAATGATACCACTTGCCTAATG | + |
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Preference number: 3 (lower is better) Translates to: KEILGMQVKARG*SWPDNDTTCLM Trigger: CATTAGGCAAGTGGTATCATTATCAGGCCAGCTGCAGCCTCTTGCCTTGACCTGCATTCCTAGAATTTCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000339834.10 ENST00000369883.3 |
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| 3UTR CCA 72 bp | ATTCTAGGAATGCAGGTCAAGGCAAGAGGCTGCAGCTaGCCTGATAATGATACCACTTGCCTAATGTTCATT | + |
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Preference number: 3 (lower is better) Translates to: ILGMQVKARGCS*PDNDTTCLMFI Trigger: AATGAACATTAGGCAAGTGGTATCATTATCAGGCCAGCTGCAGCCTCTTGCCTTGACCTGCATTCCTAGAAT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000339834.10 ENST00000369883.3 |
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| CDS-3UTR TCA 90 bp | TTACAGCAACAAAGAAATTCTAGGAATGCAGGTCAAGGCAAGAGGCTGCAGCTGATGTTTCGAGCTGCCTaGCCTAGCAGCTCGGAGCTC | + |
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Preference number: 4 (lower is better) Translates to: LQQQRNSRNAGQGKRLQLMFRAA*PSSSEL Trigger: GAGCTCCGAGCTGCTAGGTCAGGCAGCTCGAAACAT...CAGCTGCAGCCTCTTGCCTTGACCTGCATTCCTAGAATTTCTTTGTTGCTGTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000339834.10 ENST00000369883.3 |
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| CDS-3UTR TCA 90 bp | TCACCATGGCACAAACCTCTGCCACAATCACTCATAATAATTCAACTGCCTTCATGGTCACCTTCTCCGTaGGAAGCCCCTTCACGGACT | + |
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Preference number: 4 (lower is better) Translates to: SPWHKPLPQSLIIIQLPSWSPSP*EAPSRT Trigger: AGTCCGTGAAGGGGCTTCTCACGGAGAAGGTGACCA...TGAAGGCAGTTGAATTATTATGAGTGATTGTGGCAGAGGTTTGTGCCATGGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000339834.10 ENST00000369883.3 |
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| CDS-3UTR TCA 90 bp | GTTTTCACCATGGCACAAACCTCTGCCACAATCACTCATAATAATTCAACTGCCTGGTCACCTTCTCCGTaGGAAGCCCCTTCACGGACT | + |
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Preference number: 4 (lower is better) Translates to: VFTMAQTSATITHNNSTAWSPSP*EAPSRT Trigger: AGTCCGTGAAGGGGCTTCTCACGGAGAAGGTGACCA...GGCAGTTGAATTATTATGAGTGATTGTGGCAGAGGTTTGTGCCATGGTGAAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000339834.10 ENST00000369883.3 |
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| CDS-3UTR CCA 90 bp | GTTTTCACCATGGCACAAACCTCTGCCACAATCACTCATAATAATTCAACTGCCCCGCGCTTGAGACTCTaGCGTTCCAGTCGCCATCAT | + |
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Preference number: 4 (lower is better) Translates to: VFTMAQTSATITHNNSTAPRLRL*RSSRHH Trigger: ATGATGGCGACTGGAACGCCAGAGTCTCAAGCGCGG...GGCAGTTGAATTATTATGAGTGATTGTGGCAGAGGTTTGTGCCATGGTGAAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000339834.10 ENST00000369883.3 |
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| CDS-3UTR TCA 90 bp | TCACCATGGCACAAACCTCTGCCACAATCACTCATAATAATTCAACTGCCTTCATCAGCACCTGCTTGGTaGGCGCGATTACGTCAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: SPWHKPLPQSLIIIQLPSSAPAW*ARLRQY Trigger: GTACTGACGTAATCGCGCTCACCAAGCAGGTGCTGA...TGAAGGCAGTTGAATTATTATGAGTGATTGTGGCAGAGGTTTGTGCCATGGTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000339834.10 ENST00000369883.3 |
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| CDS-3UTR GCA 90 bp | TCACCATGGCACAAACCTCTGCCACAATCACTCATAATAATTCAACTGCCTTCAGAGCCTTTCAGCACCTaGTTGGTGAGCGCGATTACG | + |
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Preference number: 4 (lower is better) Translates to: SPWHKPLPQSLIIIQLPSEPFST*LVSAIT Trigger: CGTAATCGCGCTCACCAAGCAGGTGCTGAAAGGCTC...TGAAGGCAGTTGAATTATTATGAGTGATTGTGGCAGAGGTTTGTGCCATGGTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000339834.10 ENST00000369883.3 |
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| CDS-3UTR CCA 90 bp | AAGGCAAGAGGCTGCAGCTGGCCTGATAATGATACCACTTGCCTAATGTTCATTGCAAGAGGCTGCAGCTaGCCTGATAATGATACCACT | + |
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Preference number: 4 (lower is better) Translates to: KARGCSWPDNDTTCLMFIARGCS*PDNDTT Trigger: AGTGGTATCATTATCAGGCCAGCTGCAGCCTCTTGC...AATGAACATTAGGCAAGTGGTATCATTATCAGGCCAGCTGCAGCCTCTTGCCTT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000339834.10 ENST00000369883.3 |
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| CDS-3UTR GCA 90 bp | GTTTTCACCATGGCACAAACCTCTGCCACAATCACTCATAATAATTCAACTGCCTTCAAGCGATTCTCTTaGCTCAGCTTCCCGAGTAGC | + |
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Preference number: 4 (lower is better) Translates to: VFTMAQTSATITHNNSTAFKRFS*LSFPSS Trigger: GCTACTCGGGAAGCTGAGGCAAGAGAATCGCTTGAA...GGCAGTTGAATTATTATGAGTGATTGTGGCAGAGGTTTGTGCCATGGTGAAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339834.10 |
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| CDS-3UTR GCA 90 bp | AATAATTCAACTGCCTTCATATTTGGCAGTAACGTCATGCAAGTGAATTTGCTGGCGATCTTGGCTCACTaGAACCTCCACCTCCTGGGT | + |
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Preference number: 4 (lower is better) Translates to: NNSTAFIFGSNVMQVNLLAILAH*NLHLLG Trigger: ACCCAGGAGGTGGAGGTTGCAGTGAGCCAAGATCGC...CAGCAAATTCACTTGCATGACGTTACTGCCAAATATGAAGGCAGTTGAATTATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339834.10 |
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| CDS-3UTR CCA 90 bp | TCACTTAATCAAGAATTACAGCAACAAAGAAATTCTAGGAATGCAGGTCAAGGCCCGCGCTTGAGACTCTaGCGTTCCAGTCGCCATCAT | + |
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Preference number: 4 (lower is better) Translates to: SLNQELQQQRNSRNAGQGPRLRL*RSSRHH Trigger: ATGATGGCGACTGGAACGCCAGAGTCTCAAGCGCGG...GCCTTGACCTGCATTCCTAGAATTTCTTTGTTGCTGTAATTCTTGATTAAGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000339834.10 ENST00000369883.3 |
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| CDS-3UTR CCA 90 bp | AAGGCAAGAGGCTGCAGCTGGCCTGATAATGATACCACTTGCCTAATGTTCATTAAGATGGCATCTTCCTaGAGTACCATGTTTCGAGCT | + |
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Preference number: 4 (lower is better) Translates to: KARGCSWPDNDTTCLMFIKMASS*STMFRA Trigger: AGCTCGAAACATGGTACTCCAGGAAGATGCCATCTT...AATGAACATTAGGCAAGTGGTATCATTATCAGGCCAGCTGCAGCCTCTTGCCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000339834.10 ENST00000369883.3 |
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| CDS-3UTR GCA 90 bp | TTACAGCAACAAAGAAATTCTAGGAATGCAGGTCAAGGCAAGAGGCTGCAGCTGAAACTATCTTCTGAGTaGAAGATGGCATCTTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: LQQQRNSRNAGQGKRLQLKLSSE*KMASSW Trigger: CCAGGAAGATGCCATCTTGCACTCAGAAGATAGTTT...CAGCTGCAGCCTCTTGCCTTGACCTGCATTCCTAGAATTTCTTTGTTGCTGTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000339834.10 ENST00000369883.3 |
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| CDS-3UTR CCA 90 bp | GTTTTCACCATGGCACAAACCTCTGCCACAATCACTCATAATAATTCAACTGCCCTTCTGAGTGCAAGATaGCATCTTCCTGGAGTACCA | + |
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Preference number: 4 (lower is better) Translates to: VFTMAQTSATITHNNSTALLSAR*HLPGVP Trigger: TGGTACTCCAGGAAGATGCCATCTTGCACTCAGAAG...GGCAGTTGAATTATTATGAGTGATTGTGGCAGAGGTTTGTGCCATGGTGAAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000339834.10 ENST00000369883.3 |
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| CDS-3UTR TCA 90 bp | AGGTCACTTAATCAAGAATTACAGCAACAAAGAAATTCTAGGAATGCAGGTCAATCAGCACCTGCTTGGTaGGCGCGATTACGTCAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: RSLNQELQQQRNSRNAGQSAPAW*ARLRQY Trigger: GTACTGACGTAATCGCGCTCACCAAGCAGGTGCTGA...TTGACCTGCATTCCTAGAATTTCTTTGTTGCTGTAATTCTTGATTAAGTGACCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000339834.10 ENST00000369883.3 |
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| CDS-3UTR TCA 90 bp | AAGGCAAGAGGCTGCAGCTGGCCTGATAATGATACCACTTGCCTAATGTTCATTAACACGTATCTCCTCTaGGTTACTAGAACAGAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: KARGCSWPDNDTTCLMFINTYLL*VTRTEK Trigger: CTTTTCTGTTCTAGTAACTCAGAGGAGATACGTGTT...AATGAACATTAGGCAAGTGGTATCATTATCAGGCCAGCTGCAGCCTCTTGCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339834.10 |
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| CDS-3UTR GCA 90 bp | AGGTCACTTAATCAAGAATTACAGCAACAAAGAAATTCTAGGAATGCAGGTCAAGAGCCTTTCAGCACCTaGTTGGTGAGCGCGATTACG | + |
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Preference number: 4 (lower is better) Translates to: RSLNQELQQQRNSRNAGQEPFST*LVSAIT Trigger: CGTAATCGCGCTCACCAAGCAGGTGCTGAAAGGCTC...TTGACCTGCATTCCTAGAATTTCTTTGTTGCTGTAATTCTTGATTAAGTGACCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000339834.10 ENST00000369883.3 |
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| CDS-3UTR TCA 90 bp | AAGGCAAGAGGCTGCAGCTGGCCTGATAATGATACCACTTGCCTAATGTTCATTTGTTCAACATTCTTCTaGATAGCTTCTTGCTGGTAT | + |
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Preference number: 4 (lower is better) Translates to: KARGCSWPDNDTTCLMFICSTFF*IASCWY Trigger: ATACCAGCAAGAAGCTATTCAGAAGAATGTTGAACA...AATGAACATTAGGCAAGTGGTATCATTATCAGGCCAGCTGCAGCCTCTTGCCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000339834.10 ENST00000369883.3 |
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| CDS-3UTR CCA 90 bp | TCACTTAATCAAGAATTACAGCAACAAAGAAATTCTAGGAATGCAGGTCAAGGCGCAAGAGGCTGCAGCTaGCCTGATAATGATACCACT | + |
|
Preference number: 4 (lower is better) Translates to: SLNQELQQQRNSRNAGQGARGCS*PDNDTT Trigger: AGTGGTATCATTATCAGGCCAGCTGCAGCCTCTTGC...GCCTTGACCTGCATTCCTAGAATTTCTTTGTTGCTGTAATTCTTGATTAAGTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000339834.10 ENST00000369883.3 |
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| CDS-3UTR TCA 90 bp | GTTTTCACCATGGCACAAACCTCTGCCACAATCACTCATAATAATTCAACTGCCCAATCTCTTAGTCAATaGAGACCTGAACTACAACAA | + |
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Preference number: 4 (lower is better) Translates to: VFTMAQTSATITHNNSTAQSLSQ*RPELQQ Trigger: TTGTTGTAGTTCAGGTCTTCATTGACTAAGAGATTG...GGCAGTTGAATTATTATGAGTGATTGTGGCAGAGGTTTGTGCCATGGTGAAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000339834.10 ENST00000369883.3 |
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| CDS-3UTR CCA 90 bp | AGGTCACTTAATCAAGAATTACAGCAACAAAGAAATTCTAGGAATGCAGGTCAAAAGATGGCATCTTCCTaGAGTACCATGTTTCGAGCT | + |
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Preference number: 4 (lower is better) Translates to: RSLNQELQQQRNSRNAGQKMASS*STMFRA Trigger: AGCTCGAAACATGGTACTCCAGGAAGATGCCATCTT...TTGACCTGCATTCCTAGAATTTCTTTGTTGCTGTAATTCTTGATTAAGTGACCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000339834.10 ENST00000369883.3 |
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| CDS-3UTR GCA 90 bp | AGGTCACTTAATCAAGAATTACAGCAACAAAGAAATTCTAGGAATGCAGGTCAAAAACTATCTTCTGAGTaGAAGATGGCATCTTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: RSLNQELQQQRNSRNAGQKLSSE*KMASSW Trigger: CCAGGAAGATGCCATCTTGCACTCAGAAGATAGTTT...TTGACCTGCATTCCTAGAATTTCTTTGTTGCTGTAATTCTTGATTAAGTGACCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000339834.10 ENST00000369883.3 |
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| CDS-3UTR GCA 90 bp | AATAATTCAACTGCCTTCATATTTGGCAGTAACGTCATGCAAGTGAATTTGCTGATCCGATTCAAGAAGTaGTTCCAAAATTCAACCACC | + |
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Preference number: 4 (lower is better) Translates to: NNSTAFIFGSNVMQVNLLIRFKK*FQNSTT Trigger: GGTGGTTGAATTTTGGAAGCACTTCTTGAATCGGAT...CAGCAAATTCACTTGCATGACGTTACTGCCAAATATGAAGGCAGTTGAATTATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339834.10 |
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| CDS-3UTR TCA 90 bp | CTTAATCAAGAATTACAGCAACAAAGAAATTCTAGGAATGCAGGTCAAGGCAAGTTCTATTTCAACAGATaGTTCAACTGGTCCTGTAGA | + |
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Preference number: 4 (lower is better) Translates to: LNQELQQQRNSRNAGQGKFYFNR*FNWSCR Trigger: TCTACAGGACCAGTTGAATCATCTGTTGAAATAGAA...CTTGCCTTGACCTGCATTCCTAGAATTTCTTTGTTGCTGTAATTCTTGATTAAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000339834.10 ENST00000369883.3 |
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| CDS-3UTR TCA 90 bp | CTTAATCAAGAATTACAGCAACAAAGAAATTCTAGGAATGCAGGTCAAGGCAAGCAATCTCTTAGTCAATaGAGACCTGAACTACAACAA | + |
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Preference number: 4 (lower is better) Translates to: LNQELQQQRNSRNAGQGKQSLSQ*RPELQQ Trigger: TTGTTGTAGTTCAGGTCTTCATTGACTAAGAGATTG...CTTGCCTTGACCTGCATTCCTAGAATTTCTTTGTTGCTGTAATTCTTGATTAAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000339834.10 ENST00000369883.3 |
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| CDS-3UTR TCA 90 bp | CTCAATCTCTTAGTCAATGAAGACCTGAACTACAACAATATAGAGTCCCATTTTTGTTCAACATTCTTCTaGATAGCTTCTTGCTGGTAT | + |
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Preference number: 4 (lower is better) Translates to: LNLLVNEDLNYNNIESHFCSTFF*IASCWY Trigger: ATACCAGCAAGAAGCTATTCAGAAGAATGTTGAACA...AAAATGGGACTCTATATTGTTGTAGTTCAGGTCTTCATTGACTAAGAGATTGAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000339834.10 ENST00000369883.3 |
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| CDS-3UTR CAA 90 bp | AAGGCAAGAGGCTGCAGCTGGCCTGATAATGATACCACTTGCCTAATGTTCATTCTGACCGAACCGCGCTaGAGACTCTGGCGTTCCAGT | + |
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Preference number: 5 (lower is better) Translates to: KARGCSWPDNDTTCLMFILTEPR*RLWRSS Trigger: ACTGGAACGCCAGAGTCTCAAGCGCGGTTCGGTCAG...AATGAACATTAGGCAAGTGGTATCATTATCAGGCCAGCTGCAGCCTCTTGCCTT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000339834.10 ENST00000369883.3 |
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| CDS TCA 90 bp | CTCCCACTCTGGCCTCCACAGGAAAGTGCTGAAGCACAAAGTCCATaGAAGCAGACCAGGGATAATGATTCTGCAGCAAATAGTTGCTGG | + |
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Preference number: 5 (lower is better) Translates to: LPLWPPQESAEAQSP*KQTRDNDSAANSCW Trigger: CCAGCAACTATTTGCTGCAGAATCATTATCCCTGGTCTGCTTTCATGGACTTTGTGCTTCAGCACTTTCCTGTGGAGGCCAGAGTGGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478833.1 |
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| CDS-3UTR CAA 90 bp | TTACAGCAACAAAGAAATTCTAGGAATGCAGGTCAAGGCAAGAGGCTGCAGCTGCCTTTCAGCACCTGCTaGGTGAGCGCGATTACGTCA | + |
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Preference number: 5 (lower is better) Translates to: LQQQRNSRNAGQGKRLQLPFSTC*VSAITS Trigger: TGACGTAATCGCGCTCACCAAGCAGGTGCTGAAAGG...CAGCTGCAGCCTCTTGCCTTGACCTGCATTCCTAGAATTTCTTTGTTGCTGTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000339834.10 ENST00000369883.3 |
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| CDS TCA 90 bp | CCTCAATTTAACATGGGGAGGTTCATAAAGGGTGGACTCTGCTCCTaGTTCTCATCCTTTACCCCCACTTCTTCTGTAGTCTCAGGCATC | + |
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Preference number: 5 (lower is better) Translates to: PQFNMGRFIKGGLCS*FSSFTPTSSVVSGI Trigger: GATGCCTGAGACTACAGAAGAAGTGGGGGTAAAGGATGAGAATCAGGAGCAGAGTCCACCCTTTATGAACCTCCCCATGTTAAATTGAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000478833.1 |
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| CDS-3UTR CAA 90 bp | AATAATTCAACTGCCTTCATATTTGGCAGTAACGTCATGCAAGTGAATTTGCTGCTGACCGAACCGCGCTaGAGACTCTGGCGTTCCAGT | + |
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Preference number: 5 (lower is better) Translates to: NNSTAFIFGSNVMQVNLLLTEPR*RLWRSS Trigger: ACTGGAACGCCAGAGTCTCAAGCGCGGTTCGGTCAG...CAGCAAATTCACTTGCATGACGTTACTGCCAAATATGAAGGCAGTTGAATTATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000339834.10 ENST00000369883.3 |
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| CDS-3UTR CAA 90 bp | CTCAATCTCTTAGTCAATGAAGACCTGAACTACAACAATATAGAGTCCCATTTTCCTTTCAGCACCTGCTaGGTGAGCGCGATTACGTCA | + |
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Preference number: 5 (lower is better) Translates to: LNLLVNEDLNYNNIESHFPFSTC*VSAITS Trigger: TGACGTAATCGCGCTCACCAAGCAGGTGCTGAAAGG...AAAATGGGACTCTATATTGTTGTAGTTCAGGTCTTCATTGACTAAGAGATTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000339834.10 ENST00000369883.3 |
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| CDS-3UTR CAA 90 bp | AGAGCATGGGTTAATCCGATTCAAGAAGTGCTTCCAAAATTCAACCACCTCGCTCTTCTGAATAGCTTCTaGCTGGTATTGAAGATGTGT | + |
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Preference number: 5 (lower is better) Translates to: RAWVNPIQEVLPKFNHLALLNSF*LVLKMC Trigger: ACACATCTTCAATACCAGCAAGAAGCTATTCAGAAG...AGCGAGGTGGTTGAATTTTGGAAGCACTTCTTGAATCGGATTAACCCATGCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339834.10 |
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| CDS-3UTR CAA 90 bp | GTTTTCACCATGGCACAAACCTCTGCCACAATCACTCATAATAATTCAACTGCCCTTCTGAATAGCTTCTaGCTGGTATTGAAGATGTGT | + |
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Preference number: 5 (lower is better) Translates to: VFTMAQTSATITHNNSTALLNSF*LVLKMC Trigger: ACACATCTTCAATACCAGCAAGAAGCTATTCAGAAG...GGCAGTTGAATTATTATGAGTGATTGTGGCAGAGGTTTGTGCCATGGTGAAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000339834.10 ENST00000369883.3 |
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| CDS TCA 90 bp | AAAGGAGTCCTACAGCACTCTTACATGTCATTCTATTTCAACAGATaGTTCAACTGGTCCTGTAGATCCGATGACTGTTCAACATTCTTC | + |
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Preference number: 5 (lower is better) Translates to: KGVLQHSYMSFYFNR*FNWSCRSDDCSTFF Trigger: GAAGAATGTTGAACAGTCATCGGATCTACAGGACCAGTTGAATCATCTGTTGAAATAGAATGACATGTAAGAGTGCTGTAGGACTCCTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339834.10 |
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| CDS TCA 90 bp | GATTCTGCAGCAAATAGTTGCTGGAGGGGGCATACTCACTGGTATTaGAGATGTGTTGTTATTATTGCCATCTTCCTTAAACTATCTTCT | + |
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Preference number: 5 (lower is better) Translates to: DSAANSCWRGHTHWY*RCVVIIAIFLKLSS Trigger: AGAAGATAGTTTAAGGAAGATGGCAATAATAACAACACATCTTCAATACCAGTGAGTATGCCCCCTCCAGCAACTATTTGCTGCAGAATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000478833.1 |
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| CDS-3UTR CAA 90 bp | CTTAATCAAGAATTACAGCAACAAAGAAATTCTAGGAATGCAGGTCAAGGCAAGCAACTGCCTTCATATTaGGCAGTAACGTCATGCAAG | + |
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Preference number: 5 (lower is better) Translates to: LNQELQQQRNSRNAGQGKQLPSY*AVTSCK Trigger: CTTGCATGACGTTACTGCCAAATATGAAGGCAGTTG...CTTGCCTTGACCTGCATTCCTAGAATTTCTTTGTTGCTGTAATTCTTGATTAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000339834.10 ENST00000369883.3 |
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| CDS-3UTR CAA 90 bp | CTCAATCTCTTAGTCAATGAAGACCTGAACTACAACAATATAGAGTCCCATTTTCAACTGCCTTCATATTaGGCAGTAACGTCATGCAAG | + |
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Preference number: 5 (lower is better) Translates to: LNLLVNEDLNYNNIESHFQLPSY*AVTSCK Trigger: CTTGCATGACGTTACTGCCAAATATGAAGGCAGTTG...AAAATGGGACTCTATATTGTTGTAGTTCAGGTCTTCATTGACTAAGAGATTGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000339834.10 ENST00000369883.3 |
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| CDS-3UTR CAA 90 bp | CTTAATCAAGAATTACAGCAACAAAGAAATTCTAGGAATGCAGGTCAAGGCAAGGGTATTGAAGATGTGTaGTTATTATTGCCATCTTCC | + |
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Preference number: 5 (lower is better) Translates to: LNQELQQQRNSRNAGQGKGIEDV*LLLPSS Trigger: GGAAGATGGCAATAATAACAACACATCTTCAATACC...CTTGCCTTGACCTGCATTCCTAGAATTTCTTTGTTGCTGTAATTCTTGATTAAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000339834.10 ENST00000369883.3 |
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| CDS TCA 72 bp | GCTCGGAGCTCCGGGAGCCTTTCAGCACCTGCTTGGTaGGCGCGATTACGTCAGTACCACAGGTGGTCACCT | + |
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Preference number: 6 (lower is better) Translates to: ARSSGSLSAPAW*ARLRQYHRWSP Trigger: AGGTGACCACCTGTGGTACTGACGTAATCGCGCTCACCAAGCAGGTGCTGAAAGGCTCCCGGAGCTCCGAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000339834.10 ENST00000369883.3 |
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| CDS GCA 72 bp | CCTAGCAGCTCGGAGCTCCGGGAGCCTTTCAGCACCTaGTTGGTGAGCGCGATTACGTCAGTACCACAGGTG | + |
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Preference number: 6 (lower is better) Translates to: PSSSELREPFST*LVSAITSVPQV Trigger: CACCTGTGGTACTGACGTAATCGCGCTCACCAAGCAGGTGCTGAAAGGCTCCCGGAGCTCCGAGCTGCTAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000339834.10 ENST00000369883.3 |
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| CDS CAA 72 bp | AGCAGCTCGGAGCTCCGGGAGCCTTTCAGCACCTGCTaGGTGAGCGCGATTACGTCAGTACCACAGGTGGTC | + |
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Preference number: 6 (lower is better) Translates to: SSSELREPFSTC*VSAITSVPQVV Trigger: GACCACCTGTGGTACTGACGTAATCGCGCTCACCAAGCAGGTGCTGAAAGGCTCCCGGAGCTCCGAGCTGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000339834.10 ENST00000369883.3 |
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| CDS TCA 72 bp | CGATTACGTCAGTACCACAGGTGGTCACCTTCTCCGTaGGAAGCCCCTTCACGGACTGACCGAACCGCGCTT | + |
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Preference number: 6 (lower is better) Translates to: RLRQYHRWSPSP*EAPSRTDRTAL Trigger: AAGCGCGGTTCGGTCAGTCCGTGAAGGGGCTTCTCACGGAGAAGGTGACCACCTGTGGTACTGACGTAATCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000339834.10 ENST00000369883.3 |
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| CDS CAA 72 bp | CGTGAGAAGCCCCTTCACGGACTGACCGAACCGCGCTaGAGACTCTGGCGTTCCAGTCGCCATCATTTCAGT | + |
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Preference number: 6 (lower is better) Translates to: REKPLHGLTEPR*RLWRSSRHHFS Trigger: ACTGAAATGATGGCGACTGGAACGCCAGAGTCTCAAGCGCGGTTCGGTCAGTCCGTGAAGGGGCTTCTCACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000339834.10 ENST00000369883.3 |
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| CDS TCA 72 bp | AACATGGGGAGGTTCATAAAGGGTGGACTCTGCTCCTaGTTCTCATCCTTTACCCCCACTTCTTCTGTAGTC | + |
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Preference number: 6 (lower is better) Translates to: NMGRFIKGGLCS*FSSFTPTSSVV Trigger: GACTACAGAAGAAGTGGGGGTAAAGGATGAGAATCAGGAGCAGAGTCCACCCTTTATGAACCTCCCCATGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000478833.1 |
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| CDS TCA 72 bp | TGGCCTCCACAGGAAAGTGCTGAAGCACAAAGTCCATaGAAGCAGACCAGGGATAATGATTCTGCAGCAAAT | + |
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Preference number: 6 (lower is better) Translates to: WPPQESAEAQSP*KQTRDNDSAAN Trigger: ATTTGCTGCAGAATCATTATCCCTGGTCTGCTTTCATGGACTTTGTGCTTCAGCACTTTCCTGTGGAGGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478833.1 |
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| CDS CCA 72 bp | TTGCCATCTTCCTTAAACTATCTTCTGAGTGCAAGATaGCATCTTCCTGGAGTACCATGTTTCGAGCTGCCT | + |
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Preference number: 6 (lower is better) Translates to: LPSSLNYLLSAR*HLPGVPCFELP Trigger: AGGCAGCTCGAAACATGGTACTCCAGGAAGATGCCATCTTGCACTCAGAAGATAGTTTAAGGAAGATGGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000339834.10 ENST00000369883.3 ENST00000478833.1 |
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| CDS CAA 72 bp | GCTGGAGGGGGCATACTCACTGGTATTGAAGATGTGTaGTTATTATTGCCATCTTCCTTAAACTATCTTCTG | + |
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Preference number: 6 (lower is better) Translates to: AGGGILTGIEDV*LLLPSSLNYLL Trigger: CAGAAGATAGTTTAAGGAAGATGGCAATAATAACAACACATCTTCAATACCAGTGAGTATGCCCCCTCCAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000478833.1 |
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| CDS CAA 90 bp | CAAATAGTTGCTGGAGGGGGCATACTCACTGGTATTGAAGATGTGTaGTTATTATTGCCATCTTCCTTAAACTATCTTCTGAGTGCAAGA | + |
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Preference number: 6 (lower is better) Translates to: QIVAGGGILTGIEDV*LLLPSSLNYLLSAR Trigger: TCTTGCACTCAGAAGATAGTTTAAGGAAGATGGCAATAATAACAACACATCTTCAATACCAGTGAGTATGCCCCCTCCAGCAACTATTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000478833.1 |
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| CDS TCA 72 bp | CTACAGCACTCTTACATGTCATTCTATTTCAACAGATaGTTCAACTGGTCCTGTAGATCCGATGACTGTTCA | + |
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Preference number: 6 (lower is better) Translates to: LQHSYMSFYFNR*FNWSCRSDDCS Trigger: TGAACAGTCATCGGATCTACAGGACCAGTTGAATCATCTGTTGAAATAGAATGACATGTAAGAGTGCTGTAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339834.10 |
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