RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BIRC5 (Homo sapiens)

Ensembl gene IDs: ENSG00000089685

Ensembl transcript IDs: ENST00000301633.8, ENST00000350051.8, ENST00000374948.6, ENST00000586192.5, ENST00000587746.5, ENST00000589892.1, ENST00000590449.1, ENST00000590925.6, ENST00000591800.1, ENST00000592115.5, ENST00000592734.5

Found 473 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCTAAGGGGCCCACAGGAAGGCTGGTGGCACCAGGGAATAAACCCTaGAAGTGGTGCAGCCACTCTGGGACCAGGCAGCTCCGGCCAGAG +
Preference number: 1 (lower is better)
Translates to: AKGPTGRLVAPGNKP*KWCSHSGTRQLRPE
Trigger: CTCTGGCCGGAGCTGCCTGGTCCCAGAGTGGCTGCACCACTTCCAGGGTTTATTCCCTGGTGCCACCAGCCTTCCTGTGGGCCCCTTAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301633.8
ENST00000350051.8
3UTR GCA 90 bp CTGCGGGAGCTGCTGCCTCCAAAGAAAGCGGGGACCTGGGCGGACTaGGTCTCTCCCCCGTGTGGAGAACGTGACAGATGTGAAGGTTGG +
Preference number: 1 (lower is better)
Translates to: LRELLPPKKAGTWAD*VSPPCGERDRCEGW
Trigger: CCAACCTTCACATCTGTCACGTTCTCCACACGGGGGAGAGACGCAGTCCGCCCAGGTCCCCGCTTTCTTTGGAGGCAGCAGCTCCCGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR CCA 90 bp ACTTCAGCCCTGCGGGAGCTGCTGCCTCCAAAGAAAGCGGGGACCTaGGCGGACTGCGTCTCTCCCCCGTGTGGAGAACGTGACAGATGT +
Preference number: 1 (lower is better)
Translates to: TSALRELLPPKKAGT*ADCVSPPCGERDRC
Trigger: ACATCTGTCACGTTCTCCACACGGGGGAGAGACGCAGTCCGCCCAGGTCCCCGCTTTCTTTGGAGGCAGCAGCTCCCGCAGGGCTGAAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR GCA 90 bp GGGGGCTCCAGTTTGGCTTGCTGGTCTCTTCTGGGCAGCGGGCACTaGTGTCTCTACTTTCCAGGATGGCAGTTGGCCCGAGGGGCTCTA +
Preference number: 1 (lower is better)
Translates to: GGSSLACWSLLGSGH*CLYFPGWQLARGAL
Trigger: TAGAGCCCCTCGGGCCAACTGCCATCCTGGAAAGTAGAGACAGCAGTGCCCGCTGCCCAGAAGAGACCAGCAAGCCAAACTGGAGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR GCA 90 bp TCAAATCCATCATCTTACGCCAGACTTCAGCCCTGCGGGAGCTGCTaGCTCCAAAGAAAGCGGGGACCTGGGCGGACTGCGTCTCTCCCC +
Preference number: 1 (lower is better)
Translates to: SNPSSYARLQPCGSC*LQRKRGPGRTASLP
Trigger: GGGGAGAGACGCAGTCCGCCCAGGTCCCCGCTTTCTTTGGAGGCAGCAGCTCCCGCAGGGCTGAAGTCTGGCGTAAGATGATGGATTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR GCA 90 bp GGATTTAGGCCACTGCCTTTTTCTGAGGGAGGAGCGGCCAGCATGTaGCCCGCGGCTCACTGGGCCTGTCTAATCACACAGCAGTGGCAA +
Preference number: 1 (lower is better)
Translates to: GFRPLPFSEGGAASM*PAAHWACLITQQWQ
Trigger: TTGCCACTGCTGTGTGATTAGACAGGCCCAGTGAGCCGCGGGGCACATGCTGGCCGCTCCTCCCTCAGAAAAAGGCAGTGGCCTAAATCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR CCA 90 bp TGGTCTCTTCTGGGCAGCGGGCACTGCTGTCTCTACTTTCCAGGATaGCAGTTGGCCCGAGGGGCTCTAACCTGCCATTGGAACCTCACC +
Preference number: 1 (lower is better)
Translates to: WSLLGSGHCCLYFPG*QLARGALTCHWNLT
Trigger: GGTGAGGTTCCAATGGCAGGTTAGAGCCCCTCGGGCCAACTGCCATCCTGGAAAGTAGAGACAGCAGTGCCCGCTGCCCAGAAGAGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR CCA 90 bp CGACAGCCTGCAATGGGGGCTCCAGTTTGGCTTGCTGGTCTCTTCTaGGCAGCGGGCACTGCTGTCTCTACTTTCCAGGATGGCAGTTGG +
Preference number: 1 (lower is better)
Translates to: RQPAMGAPVWLAGLF*AAGTAVSTFQDGSW
Trigger: CCAACTGCCATCCTGGAAAGTAGAGACAGCAGTGCCCGCTGCCCAGAAGAGACCAGCAAGCCAAACTGGAGCCCCCATTGCAGGCTGTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR GCA 90 bp GGAGAACGTGACAGATGTGAAGGTTGGGCTGACAGACACACGGCCTaGAGCAGCCCAGCCAGTCCCCCACAGCATCGAGCCAAGTCATTT +
Preference number: 1 (lower is better)
Translates to: GERDRCEGWADRHTA*SSPASPPQHRAKSF
Trigger: AAATGACTTGGCTCGATGCTGTGGGGGACTGGCTGGGCTGCTGCAGGCCGTGTGTCTGTCAGCCCAACCTTCACATCTGTCACGTTCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR GCA 90 bp GAATCAAATCCATCATCTTACGCCAGACTTCAGCCCTGCGGGAGCTaGTGCCTCCAAAGAAAGCGGGGACCTGGGCGGACTGCGTCTCTC +
Preference number: 1 (lower is better)
Translates to: ESNPSSYARLQPCGS*CLQRKRGPGRTASL
Trigger: GAGAGACGCAGTCCGCCCAGGTCCCCGCTTTCTTTGGAGGCAGCAGCTCCCGCAGGGCTGAAGTCTGGCGTAAGATGATGGATTTGATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR CCA 90 bp GACAACTGCGTCTCTGCCAGGACGCTCATCCTCACTGCGGCTGTCTaGGCAGATGGCTGTTGGCAGGCTAGGGACGACGATGAAAAACTG +
Preference number: 1 (lower is better)
Translates to: DNCVSARTLILTAAV*ADGCWQARDDDEKL
Trigger: CAGTTTTTCATCGTCGTCCCTAGCCTGCCAACAGCCATCTGCCCAGACAGCCGCAGTGAGGATGAGCGTCCTGGCAGAGACGCAGTTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR CCA 90 bp TTCCACATGGCGACAGCCTGCAATGGGGGCTCCAGTTTGGCTTGCTaGTCTCTTCTGGGCAGCGGGCACTGCTGTCTCTACTTTCCAGGA +
Preference number: 1 (lower is better)
Translates to: FHMATACNGGSSLAC*SLLGSGHCCLYFPG
Trigger: TCCTGGAAAGTAGAGACAGCAGTGCCCGCTGCCCAGAAGAGACCAGCAAGCCAAACTGGAGCCCCCATTGCAGGCTGTCGCCATGTGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR GCA 90 bp TCTTTCCACATGGCGACAGCCTGCAATGGGGGCTCCAGTTTGGCTTaGTGGTCTCTTCTGGGCAGCGGGCACTGCTGTCTCTACTTTCCA +
Preference number: 1 (lower is better)
Translates to: SFHMATACNGGSSLA*WSLLGSGHCCLYFP
Trigger: TGGAAAGTAGAGACAGCAGTGCCCGCTGCCCAGAAGAGACCAGCAAGCCAAACTGGAGCCCCCATTGCAGGCTGTCGCCATGTGGAAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR CCA 90 bp GTTACTCTTTCCACATGGCGACAGCCTGCAATGGGGGCTCCAGTTTaGCTTGCTGGTCTCTTCTGGGCAGCGGGCACTGCTGTCTCTACT +
Preference number: 1 (lower is better)
Translates to: VTLSTWRQPAMGAPV*LAGLFWAAGTAVST
Trigger: AGTAGAGACAGCAGTGCCCGCTGCCCAGAAGAGACCAGCAAGCCAAACTGGAGCCCCCATTGCAGGCTGTCGCCATGTGGAAAGAGTAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR CCA 90 bp ATCTCCTTTCCTAAGACATTGCTAAGGGGCCCACAGGAAGGCTGGTaGCACCAGGGAATAAACCCTGGAAGTGGTGCAGCCACTCTGGGA +
Preference number: 1 (lower is better)
Translates to: ISFPKTLLRGPQEGW*HQGINPGSGAATLG
Trigger: TCCCAGAGTGGCTGCACCACTTCCAGGGTTTATTCCCTGGTGCCACCAGCCTTCCTGTGGGCCCCTTAGCAATGTCTTAGGAAAGGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301633.8
ENST00000350051.8
3UTR CCA 90 bp ATTGGCAATTGTGAGTTACTCTTTCCACATGGCGACAGCCTGCAATaGGGGCTCCAGTTTGGCTTGCTGGTCTCTTCTGGGCAGCGGGCA +
Preference number: 1 (lower is better)
Translates to: IGNCELLFPHGDSLQ*GLQFGLLVSSGQRA
Trigger: TGCCCGCTGCCCAGAAGAGACCAGCAAGCCAAACTGGAGCCCCCATTGCAGGCTGTCGCCATGTGGAAAGAGTAACTCACAATTGCCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR CCA 90 bp TTGATCTCCTTTCCTAAGACATTGCTAAGGGGCCCACAGGAAGGCTaGTGGCACCAGGGAATAAACCCTGGAAGTGGTGCAGCCACTCTG +
Preference number: 1 (lower is better)
Translates to: LISFPKTLLRGPQEG*WHQGINPGSGAATL
Trigger: CAGAGTGGCTGCACCACTTCCAGGGTTTATTCCCTGGTGCCACCAGCCTTCCTGTGGGCCCCTTAGCAATGTCTTAGGAAAGGAGATCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301633.8
ENST00000350051.8
3UTR GCA 90 bp AGAGAGAGAGAGAGAGAAGCAGCCACTGTTACCAGCAGCACCCGCTaGACAGGCAGAAGCACCTCTGGTGCCACTTTCAAGACAAAACAA +
Preference number: 1 (lower is better)
Translates to: REREREAATVTSSTR*TGRSTSGATFKTKQ
Trigger: TTGTTTTGTCTTGAAAGTGGCACCAGAGGTGCTTCTGCCTGTGCAGCGGGTGCTGCTGGTAACAGTGGCTGCTTCTCTCTCTCTCTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR GCA 90 bp TCTTCAAACTGCTTCTTGACAGAAAGGAAAGCGCAACCGGACGAATaGTTTTTATGTTCCTCTCTCGTGATCCGCCCGCCTCGGCCTCCC +
Preference number: 1 (lower is better)
Translates to: SSNCFLTERKAQPDE*FLCSSLVIRPPRPP
Trigger: GGGAGGCCGAGGCGGGCGGATCACGAGAGAGGAACATAAAAAGCATTCGTCCGGTTGCGCTTTCCTTTCTGTCAAGAAGCAGTTTGAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591800.1
3UTR TCA 90 bp CAGCTCAGATTCAACAGGCACCTGCCAAGTCCACACTCAGGACTGTaGCAGCCTCAACAACATGAGGTCCAGACACATTCACTGTGGAAG +
Preference number: 1 (lower is better)
Translates to: QLRFNRHLPSPHSGL*QPQQHEVQTHSLWK
Trigger: CTTCCACAGTGAATGTGTCTGGACCTCATGTTGTTGAGGCTGTCACAGTCCTGAGTGTGGACTTGGCAGGTGCCTGTTGAATCTGAGCTG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR TCA 90 bp CCAGAGGTTTCCAGCGAAGCTGTAACAATCCACCCTGCAGCTCTATaGCAGGGAGGAGGGCGAATCAAATCCATCATCTTACGCCAGACT +
Preference number: 1 (lower is better)
Translates to: PEVSSEAVTIHPAAL*QGGGRIKSIILRQT
Trigger: AGTCTGGCGTAAGATGATGGATTTGATTCGCCCTCCTCCCTGTCATAGAGCTGCAGGGTGGATTGTTACAGCTTCGCTGGAAACCTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR GCA 90 bp ACTTTATTGGCAATTGTGAGTTACTCTTTCCACATGGCGACAGCCTaGAATGGGGGCTCCAGTTTGGCTTGCTGGTCTCTTCTGGGCAGC +
Preference number: 1 (lower is better)
Translates to: TLLAIVSYSFHMATA*NGGSSLACWSLLGS
Trigger: GCTGCCCAGAAGAGACCAGCAAGCCAAACTGGAGCCCCCATTGCAGGCTGTCGCCATGTGGAAAGAGTAACTCACAATTGCCAATAAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR GCA 90 bp GAGATGACCTCCAGAGGTTTCCAGCGAAGCTGTAACAATCCACCCTaGAGCTCTATGACAGGGAGGAGGGCGAATCAAATCCATCATCTT +
Preference number: 1 (lower is better)
Translates to: EMTSRGFQRSCNNPP*SSMTGRRANQIHHL
Trigger: AAGATGATGGATTTGATTCGCCCTCCTCCCTGTCATAGAGCTGCAGGGTGGATTGTTACAGCTTCGCTGGAAACCTCTGGAGGTCATCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR CCA 90 bp AGCCACTGTTACCAGCAGCACCCGCTGCACAGGCAGAAGCACCTCTaGTGCCACTTTCAAGACAAAACAAGAGCACAGTTGAAACATCTA +
Preference number: 1 (lower is better)
Translates to: SHCYQQHPLHRQKHL*CHFQDKTRAQLKHL
Trigger: TAGATGTTTCAACTGTGCTCTTGTTTTGTCTTGAAAGTGGCACCAGAGGTGCTTCTGCCTGTGCAGCGGGTGCTGCTGGTAACAGTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR TCA 90 bp TCTGCCAGACGCTTCCTATCACTCTATTCTGTCTCCTCATCCACCTaGAGTTCACCCCGTTTCCCCAATGACTTAGAATGGCTTTGTGCT +
Preference number: 1 (lower is better)
Translates to: SARRFLSLYSVSSST*SSPRFPNDLEWLCA
Trigger: AGCACAAAGCCATTCTAAGTCATTGGGGAAACGGGGTGAACTTCAGGTGGATGAGGAGACAGAATAGAGTGATAGGAAGCGTCTGGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR GCA 90 bp CACTGTTACCAGCAGCACCCGCTGCACAGGCAGAAGCACCTCTGGTaGCACTTTCAAGACAAAACAAGAGCACAGTTGAAACATCTAATT +
Preference number: 1 (lower is better)
Translates to: HCYQQHPLHRQKHLW*HFQDKTRAQLKHLI
Trigger: AATTAGATGTTTCAACTGTGCTCTTGTTTTGTCTTGAAAGTGGCACCAGAGGTGCTTCTGCCTGTGCAGCGGGTGCTGCTGGTAACAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR TCA 90 bp AAAAGCACTTGGACGTTCCTGGGAGTTCACAACAACAGGGTCTGCTaGTGTATTCTGTTGAACATGAAAGGCATCAGGCATCTTACGTCC +
Preference number: 1 (lower is better)
Translates to: KSTWTFLGVHNNRVC*CILLNMKGIRHLTS
Trigger: GGACGTAAGATGCCTGATGCCTTTCATGTTCAACAGAATACATCAGCAGACCCTGTTGTTGTGAACTCCCAGGAACGTCCAAGTGCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590449.1
3UTR CCA 90 bp CACAACCCTTCCCAGACTCCACTCCAACTTAGAGAACCTGAAAAATaGACATGTGGACATGTATCTGAAAGAAAGTCTAGGCGGTTGCAC +
Preference number: 1 (lower is better)
Translates to: HNPSQTPLQLREPEK*TCGHVSERKSRRLH
Trigger: GTGCAACCGCCTAGACTTTCTTTCAGATACATGTCCACATGTCCATTTTTCAGGTTCTCTAAGTTGGAGTGGAGTCTGGGAAGGGTTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR CCA 90 bp AGGAAAGTCCAGAGCCTTCCTCTTCATGTCCAGTTAAACAGACCCTaGCAAACATCAGGCTCTTCCTCGAACAGAAATTCTTTTGCTTCC +
Preference number: 1 (lower is better)
Translates to: RKVQSLPLHVQLNRP*QTSGSSSNRNSFAS
Trigger: GGAAGCAAAAGAATTTCTGTTCGAGGAAGAGCCTGATGTTTGCCAGGGTCTGTTTAACTGGACATGAAGAGGAAGGCTCTGGACTTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000586192.5
ENST00000587746.5
ENST00000590925.6
ENST00000591800.1
ENST00000592734.5
3UTR-3UTR GCA 90 bp GCCTCCAAAGAAAGCGGGGACCTGGGCGGACTGCGTCTCTCCCCCGTGTGGAGAGGAGCGGCCAGCATGTaGCCCGCGGCTCACTGGGCC +
Preference number: 2 (lower is better)
Translates to: ASKESGDLGGLRLSPVWRGAASM*PAAHWA
Trigger: GGCCCAGTGAGCCGCGGGGCACATGCTGGCCGCTCC...TCTCCACACGGGGGAGAGACGCAGTCCGCCCAGGTCCCCGCTTTCTTTGGAGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR-3UTR CCA 90 bp AAGCGCCCAGAGACAACTGCGTCTCTGCCAGGACGCTCATCCTCACTGCGGCTGGTGGTGCAGCCACTCTaGGACCAGGCAGCTCCGGCC +
Preference number: 2 (lower is better)
Translates to: KRPETTASLPGRSSSLRLVVQPL*DQAAPA
Trigger: GGCCGGAGCTGCCTGGTCCCAGAGTGGCTGCACCAC...CAGCCGCAGTGAGGATGAGCGTCCTGGCAGAGACGCAGTTGTCTCTGGGCGCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301633.8
ENST00000350051.8
3UTR-3UTR TCA 90 bp CGCCAGACTTCAGCCCTGCGGGAGCTGCTGCCTCCAAAGAAAGCGGGGACCTGGGCCACTGCCTTTTTCTaGGGGAGGAGCGGCCAGCAT +
Preference number: 2 (lower is better)
Translates to: RQTSALRELLPPKKAGTWATAFF*GRSGQH
Trigger: ATGCTGGCCGCTCCTCCCTCAGAAAAAGGCAGTGGC...CCAGGTCCCCGCTTTCTTTGGAGGCAGCAGCTCCCGCAGGGCTGAAGTCTGGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR-3UTR GCA 90 bp GCCTCCAAAGAAAGCGGGGACCTGGGCGGACTGCGTCTCTCCCCCGTGTGGAGAACCAGCAGCACCCGCTaGACAGGCAGAAGCACCTCT +
Preference number: 2 (lower is better)
Translates to: ASKESGDLGGLRLSPVWRTSSTR*TGRSTS
Trigger: AGAGGTGCTTCTGCCTGTGCAGCGGGTGCTGCTGGT...TCTCCACACGGGGGAGAGACGCAGTCCGCCCAGGTCCCCGCTTTCTTTGGAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR-3UTR GCA 90 bp AAGCGCCCAGAGACAACTGCGTCTCTGCCAGGACGCTCATCCTCACTGCGGCTGGACAGACACACGGCCTaGAGCAGCCCAGCCAGTCCC +
Preference number: 2 (lower is better)
Translates to: KRPETTASLPGRSSSLRLDRHTA*SSPASP
Trigger: GGGACTGGCTGGGCTGCTGCAGGCCGTGTGTCTGTC...CAGCCGCAGTGAGGATGAGCGTCCTGGCAGAGACGCAGTTGTCTCTGGGCGCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR-3UTR GCA 90 bp CCAGGATGGCAGTTGGCCCGAGGGGCTCTAACCTGCCATTGGAACCTCACCCATGGGACCTGGGCGGACTaGGTCTCTCCCCCGTGTGGA +
Preference number: 2 (lower is better)
Translates to: PGWQLARGALTCHWNLTHGTWAD*VSPPCG
Trigger: TCCACACGGGGGAGAGACGCAGTCCGCCCAGGTCCC...ATGGGTGAGGTTCCAATGGCAGGTTAGAGCCCCTCGGGCCAACTGCCATCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR-3UTR CCA 90 bp GGCAAGCGCCCAGAGACAACTGCGTCTCTGCCAGGACGCTCATCCTCACTGCGGAAGAAAGCGGGGACCTaGGCGGACTGCGTCTCTCCC +
Preference number: 2 (lower is better)
Translates to: GKRPETTASLPGRSSSLRKKAGT*ADCVSP
Trigger: GGGAGAGACGCAGTCCGCCCAGGTCCCCGCTTTCTT...CCGCAGTGAGGATGAGCGTCCTGGCAGAGACGCAGTTGTCTCTGGGCGCTTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR-3UTR GCA 90 bp AAGCGCCCAGAGACAACTGCGTCTCTGCCAGGACGCTCATCCTCACTGCGGCTGCAGCCCTGCGGGAGCTaGTGCCTCCAAAGAAAGCGG +
Preference number: 2 (lower is better)
Translates to: KRPETTASLPGRSSSLRLQPCGS*CLQRKR
Trigger: CCGCTTTCTTTGGAGGCAGCAGCTCCCGCAGGGCTG...CAGCCGCAGTGAGGATGAGCGTCCTGGCAGAGACGCAGTTGTCTCTGGGCGCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR-3UTR TCA 90 bp GGCAAGCGCCCAGAGACAACTGCGTCTCTGCCAGGACGCTCATCCTCACTGCGGGTCTCCTCATCCACCTaGAGTTCACCCCGTTTCCCC +
Preference number: 2 (lower is better)
Translates to: GKRPETTASLPGRSSSLRVSSST*SSPRFP
Trigger: GGGGAAACGGGGTGAACTTCAGGTGGATGAGGAGAC...CCGCAGTGAGGATGAGCGTCCTGGCAGAGACGCAGTTGTCTCTGGGCGCTTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR-3UTR TCA 90 bp AGCCCTGCCCACAGCACAGGCTCACAGAAGCCGAGATCCACATCACCGCCTGGCCAGGAACAGCCGAGATaGCCTCCAGAGGTTTCCAGC +
Preference number: 2 (lower is better)
Translates to: SPAHSTGSQKPRSTSPPGQEQPR*PPEVSS
Trigger: GCTGGAAACCTCTGGAGGTCATCTCGGCTGTTCCTG...GCCAGGCGGTGATGTGGATCTCGGCTTCTGTGAGCCTGTGCTGTGGGCAGGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR-3UTR GCA 90 bp TTCAGCCCTGCGGGAGCTGCTGCCTCCAAAGAAAGCGGGGACCTGGGCGGACTGCACTGTGGAAGGCTCTaGCCACGCGAACAAAGCTGT +
Preference number: 2 (lower is better)
Translates to: FSPAGAAASKESGDLGGLHCGRL*PREQSC
Trigger: ACAGCTTTGTTCGCGTGGGCAGAGCCTTCCACAGTG...CAGTCCGCCCAGGTCCCCGCTTTCTTTGGAGGCAGCAGCTCCCGCAGGGCTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR-3UTR GCA 90 bp TTCAGTTGTTTCTGCCCGGAAGGAGCCCGGATGATACAAACAGGTCTGGGGTTCGGAGCGGCCAGCATGTaGCCCGCGGCTCACTGGGCC +
Preference number: 2 (lower is better)
Translates to: FSCFCPEGARMIQTGLGFGAASM*PAAHWA
Trigger: GGCCCAGTGAGCCGCGGGGCACATGCTGGCCGCTCC...GAACCCCAGACCTGTTTGTATCATCCGGGCTCCTTCCGGGCAGAAACAACTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR-3UTR CCA 90 bp TGGCAAGCGCCCAGAGACAACTGCGTCTCTGCCAGGACGCTCATCCTCACTGCGTGCCCCGCGGCTCACTaGGCCTGTCTAATCACACAG +
Preference number: 2 (lower is better)
Translates to: WQAPRDNCVSARTLILTACPAAH*ACLITQ
Trigger: CTGTGTGATTAGACAGGCCCAGTGAGCCGCGGGGCA...CGCAGTGAGGATGAGCGTCCTGGCAGAGACGCAGTTGTCTCTGGGCGCTTGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR-3UTR GCA 90 bp CTGCGGCTGTCTGGGCAGATGGCTGTTGGCAGGCTAGGGACGACGATGAAAAACCCCTGCGGGAGCTGCTaGCTCCAAAGAAAGCGGGGA +
Preference number: 2 (lower is better)
Translates to: LRLSGQMAVGRLGTTMKNPCGSC*LQRKRG
Trigger: TCCCCGCTTTCTTTGGAGGCAGCAGCTCCCGCAGGG...GTTTTTCATCGTCGTCCCTAGCCTGCCAACAGCCATCTGCCCAGACAGCCGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR CAA 90 bp CTTCTGGGCAGCGGGCACTGCTGTCTCTACTTTCCAGGATGGCAGTaGGCCCGAGGGGCTCTAACCTGCCATTGGAACCTCACCCATAGC +
Preference number: 2 (lower is better)
Translates to: LLGSGHCCLYFPGWQ*ARGALTCHWNLTHS
Trigger: GCTATGGGTGAGGTTCCAATGGCAGGTTAGAGCCCCTCGGGCCAACTGCCATCCTGGAAAGTAGAGACAGCAGTGCCCGCTGCCCAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR-3UTR TCA 90 bp AGACTTCAGCCCTGCGGGAGCTGCTGCCTCCAAAGAAAGCGGGGACCTGGGCGGACCCCGTTTCCCCAATaGCTTAGAATGGCTTTGTGC +
Preference number: 2 (lower is better)
Translates to: RLQPCGSCCLQRKRGPGRTPFPQ*LRMALC
Trigger: GCACAAAGCCATTCTAAGTCATTGGGGAAACGGGGT...CCGCCCAGGTCCCCGCTTTCTTTGGAGGCAGCAGCTCCCGCAGGGCTGAAGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR-3UTR GCA 90 bp CGGATGATACAAACAGGTCTGGGGTTCGTGGCTCTGGCAAGCGCCCAGAGACAACAGCCCTGCGGGAGCTaGTGCCTCCAAAGAAAGCGG +
Preference number: 2 (lower is better)
Translates to: RMIQTGLGFVALASAQRQQPCGS*CLQRKR
Trigger: CCGCTTTCTTTGGAGGCAGCAGCTCCCGCAGGGCTG...TTGTCTCTGGGCGCTTGCCAGAGCCACGAACCCCAGACCTGTTTGTATCATCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR-3UTR CCA 90 bp GGATGGCAGTTGGCCCGAGGGGCTCTAACCTGCCATTGGAACCTCACCCATAGCGGCCCACAGGAAGGCTaGTGGCACCAGGGAATAAAC +
Preference number: 2 (lower is better)
Translates to: GWQLARGALTCHWNLTHSGPQEG*WHQGIN
Trigger: GTTTATTCCCTGGTGCCACCAGCCTTCCTGTGGGCC...GCTATGGGTGAGGTTCCAATGGCAGGTTAGAGCCCCTCGGGCCAACTGCCATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301633.8
ENST00000350051.8
3UTR CAA 90 bp CTCTTTCCACATGGCGACAGCCTGCAATGGGGGCTCCAGTTTGGCTaGCTGGTCTCTTCTGGGCAGCGGGCACTGCTGTCTCTACTTTCC +
Preference number: 2 (lower is better)
Translates to: LFPHGDSLQWGLQFG*LVSSGQRALLSLLS
Trigger: GGAAAGTAGAGACAGCAGTGCCCGCTGCCCAGAAGAGACCAGCAAGCCAAACTGGAGCCCCCATTGCAGGCTGTCGCCATGTGGAAAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR-3UTR TCA 90 bp AGCCCTGCCCACAGCACAGGCTCACAGAAGCCGAGATCCACATCACCGCCTGGCACCCCGTTTCCCCAATaGCTTAGAATGGCTTTGTGC +
Preference number: 2 (lower is better)
Translates to: SPAHSTGSQKPRSTSPPGTPFPQ*LRMALC
Trigger: GCACAAAGCCATTCTAAGTCATTGGGGAAACGGGGT...GCCAGGCGGTGATGTGGATCTCGGCTTCTGTGAGCCTGTGCTGTGGGCAGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR-3UTR TCA 90 bp AAACAGGTCTGGGGTTCGTGGCTCTGGCAAGCGCCCAGAGACAACTGCGTCTCTGTCTCCTCATCCACCTaGAGTTCACCCCGTTTCCCC +
Preference number: 2 (lower is better)
Translates to: KQVWGSWLWQAPRDNCVSVSSST*SSPRFP
Trigger: GGGGAAACGGGGTGAACTTCAGGTGGATGAGGAGAC...AGAGACGCAGTTGTCTCTGGGCGCTTGCCAGAGCCACGAACCCCAGACCTGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR-3UTR TCA 90 bp GTTTGGCTTGCTGGTCTCTTCTGGGCAGCGGGCACTGCTGTCTCTACTTTCCAGGCCACTGCCTTTTTCTaGGGGAGGAGCGGCCAGCAT +
Preference number: 2 (lower is better)
Translates to: VWLAGLFWAAGTAVSTFQATAFF*GRSGQH
Trigger: ATGCTGGCCGCTCCTCCCTCAGAAAAAGGCAGTGGC...CTGGAAAGTAGAGACAGCAGTGCCCGCTGCCCAGAAGAGACCAGCAAGCCAAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR-3UTR GCA 90 bp TGGCTTGCTGGTCTCTTCTGGGCAGCGGGCACTGCTGTCTCTACTTTCCAGGATACCAGCAGCACCCGCTaGACAGGCAGAAGCACCTCT +
Preference number: 2 (lower is better)
Translates to: WLAGLFWAAGTAVSTFQDTSSTR*TGRSTS
Trigger: AGAGGTGCTTCTGCCTGTGCAGCGGGTGCTGCTGGT...ATCCTGGAAAGTAGAGACAGCAGTGCCCGCTGCCCAGAAGAGACCAGCAAGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR-3UTR GCA 90 bp TCCAGGATGGCAGTTGGCCCGAGGGGCTCTAACCTGCCATTGGAACCTCACCCAAGACAACTGCGTCTCTaGCAGGACGCTCATCCTCAC +
Preference number: 2 (lower is better)
Translates to: SRMAVGPRGSNLPLEPHPRQLRL*QDAHPH
Trigger: GTGAGGATGAGCGTCCTGGCAGAGACGCAGTTGTCT...TGGGTGAGGTTCCAATGGCAGGTTAGAGCCCCTCGGGCCAACTGCCATCCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR CAA 90 bp AGTTACTCTTTCCACATGGCGACAGCCTGCAATGGGGGCTCCAGTTaGGCTTGCTGGTCTCTTCTGGGCAGCGGGCACTGCTGTCTCTAC +
Preference number: 2 (lower is better)
Translates to: SYSFHMATACNGGSS*ACWSLLGSGHCCLY
Trigger: GTAGAGACAGCAGTGCCCGCTGCCCAGAAGAGACCAGCAAGCCAAACTGGAGCCCCCATTGCAGGCTGTCGCCATGTGGAAAGAGTAACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR-3UTR TCA 90 bp AAACAGGTCTGGGGTTCGTGGCTCTGGCAAGCGCCCAGAGACAACTGCGTCTCTGAGGAGGCACAGGTGTaGCAGATAAGGAACCTGCAG +
Preference number: 2 (lower is better)
Translates to: KQVWGSWLWQAPRDNCVSEEAQV*QIRNLQ
Trigger: CTGCAGGTTCCTTATCTGTCACACCTGTGCCTCCTC...AGAGACGCAGTTGTCTCTGGGCGCTTGCCAGAGCCACGAACCCCAGACCTGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR-3UTR GCA 90 bp TGGCTTGCTGGTCTCTTCTGGGCAGCGGGCACTGCTGTCTCTACTTTCCAGGATAAACCCTGGAAGTGGTaGAGCCACTCTGGGACCAGG +
Preference number: 2 (lower is better)
Translates to: WLAGLFWAAGTAVSTFQDKPWKW*SHSGTR
Trigger: CCTGGTCCCAGAGTGGCTGCACCACTTCCAGGGTTT...ATCCTGGAAAGTAGAGACAGCAGTGCCCGCTGCCCAGAAGAGACCAGCAAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301633.8
ENST00000350051.8
3UTR-3UTR GCA 90 bp TCCATCATCTTACGCCAGACTTCAGCCCTGCGGGAGCTGCTGCCTCCAAAGAAAACCAGCAGCACCCGCTaGACAGGCAGAAGCACCTCT +
Preference number: 2 (lower is better)
Translates to: SIILRQTSALRELLPPKKTSSTR*TGRSTS
Trigger: AGAGGTGCTTCTGCCTGTGCAGCGGGTGCTGCTGGT...TTTCTTTGGAGGCAGCAGCTCCCGCAGGGCTGAAGTCTGGCGTAAGATGATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR-3UTR GCA 90 bp GGCTCTGGCAAGCGCCCAGAGACAACTGCGTCTCTGCCAGGACGCTCATCCTCATGTAACAATCCACCCTaGAGCTCTATGACAGGGAGG +
Preference number: 2 (lower is better)
Translates to: GSGKRPETTASLPGRSSSCNNPP*SSMTGR
Trigger: CCTCCCTGTCATAGAGCTGCAGGGTGGATTGTTACA...TGAGGATGAGCGTCCTGGCAGAGACGCAGTTGTCTCTGGGCGCTTGCCAGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR-3UTR CCA 90 bp CAGCCCTGCCCACAGCACAGGCTCACAGAAGCCGAGATCCACATCACCGCCTGGAGGCAGAAGCACCTCTaGTGCCACTTTCAAGACAAA +
Preference number: 2 (lower is better)
Translates to: QPCPQHRLTEAEIHITAWRQKHL*CHFQDK
Trigger: TTTGTCTTGAAAGTGGCACCAGAGGTGCTTCTGCCT...CCAGGCGGTGATGTGGATCTCGGCTTCTGTGAGCCTGTGCTGTGGGCAGGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR-3UTR CCA 90 bp ACAGCCGAGATGACCTCCAGAGGTTTCCAGCGAAGCTGTAACAATCCACCCTGCTGCCCCGCGGCTCACTaGGCCTGTCTAATCACACAG +
Preference number: 2 (lower is better)
Translates to: TAEMTSRGFQRSCNNPPCCPAAH*ACLITQ
Trigger: CTGTGTGATTAGACAGGCCCAGTGAGCCGCGGGGCA...GCAGGGTGGATTGTTACAGCTTCGCTGGAAACCTCTGGAGGTCATCTCGGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR-3UTR GCA 90 bp CAGCCCTGCCCACAGCACAGGCTCACAGAAGCCGAGATCCACATCACCGCCTGGCAGAAGCACCTCTGGTaGCACTTTCAAGACAAAACA +
Preference number: 2 (lower is better)
Translates to: QPCPQHRLTEAEIHITAWQKHLW*HFQDKT
Trigger: TGTTTTGTCTTGAAAGTGGCACCAGAGGTGCTTCTG...CCAGGCGGTGATGTGGATCTCGGCTTCTGTGAGCCTGTGCTGTGGGCAGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR-3UTR GCA 90 bp GGCTCTGGCAAGCGCCCAGAGACAACTGCGTCTCTGCCAGGACGCTCATCCTCAGGCAAAAGGAGTATCTaGCAGACGCTTCCTATCACT +
Preference number: 2 (lower is better)
Translates to: GSGKRPETTASLPGRSSSGKRSI*QTLPIT
Trigger: AGTGATAGGAAGCGTCTGGCAGATACTCCTTTTGCC...TGAGGATGAGCGTCCTGGCAGAGACGCAGTTGTCTCTGGGCGCTTGCCAGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR-3UTR GCA 90 bp GCACTTAGACAAGGGCCTACGGCTTTATTAACAGATGTCGAGGAAGCTTTCAGGGGGACCTGGGCGGACTaGGTCTCTCCCCCGTGTGGA +
Preference number: 2 (lower is better)
Translates to: ALRQGPTALLTDVEEAFRGTWAD*VSPPCG
Trigger: TCCACACGGGGGAGAGACGCAGTCCGCCCAGGTCCC...CCTGAAAGCTTCCTCGACATCTGTTAATAAAGCCGTAGGCCCTTGTCTAAGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR-3UTR GCA 90 bp GGATGGCAGTTGGCCCGAGGGGCTCTAACCTGCCATTGGAACCTCACCCATAGCATTTTCAGTTGTTTCTaGCCGGAAGGAGCCCGGATG +
Preference number: 2 (lower is better)
Translates to: GWQLARGALTCHWNLTHSIFSCF*PEGARM
Trigger: CATCCGGGCTCCTTCCGGGCAGAAACAACTGAAAAT...GCTATGGGTGAGGTTCCAATGGCAGGTTAGAGCCCCTCGGGCCAACTGCCATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR-3UTR GCA 90 bp CCAGAGCCTTCCTCTTCATGTCCAGTTAAACAGACCCTGGCAAACATCAGGCTCTCCATGGCAGCCAGCTaGTCGATGGCACGGCGCACT +
Preference number: 2 (lower is better)
Translates to: PEPSSSCPVKQTLANIRLSMAAS*SMARRT
Trigger: AGTGCGCCGTGCCATCGAGCAGCTGGCTGCCATGGA...GAGCCTGATGTTTGCCAGGGTCTGTTTAACTGGACATGAAGAGGAAGGCTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590925.6
3UTR-3UTR CCA 90 bp CGCCCAGAGACAACTGCGTCTCTGCCAGGACGCTCATCCTCACTGCGGCTGTCTAGGCAGAAGCACCTCTaGTGCCACTTTCAAGACAAA +
Preference number: 2 (lower is better)
Translates to: RPETTASLPGRSSSLRLSRQKHL*CHFQDK
Trigger: TTTGTCTTGAAAGTGGCACCAGAGGTGCTTCTGCCT...AGACAGCCGCAGTGAGGATGAGCGTCCTGGCAGAGACGCAGTTGTCTCTGGGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR-3UTR CCA 90 bp GTTTGGCTTGCTGGTCTCTTCTGGGCAGCGGGCACTGCTGTCTCTACTTTCCAGGACAGATGTGAAGGTTaGGCTGACAGACACACGGCC +
Preference number: 2 (lower is better)
Translates to: VWLAGLFWAAGTAVSTFQDRCEG*ADRHTA
Trigger: GGCCGTGTGTCTGTCAGCCCAACCTTCACATCTGTC...CTGGAAAGTAGAGACAGCAGTGCCCGCTGCCCAGAAGAGACCAGCAAGCCAAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR-3UTR GCA 90 bp TGCAGCTCAGATTCAACAGGCACCTGCCAAGTCCACACTCAGGACTGTGACAGCCACTGTGGAAGGCTCTaGCCACGCGAACAAAGCTGT +
Preference number: 2 (lower is better)
Translates to: CSSDSTGTCQVHTQDCDSHCGRL*PREQSC
Trigger: ACAGCTTTGTTCGCGTGGGCAGAGCCTTCCACAGTG...GCTGTCACAGTCCTGAGTGTGGACTTGGCAGGTGCCTGTTGAATCTGAGCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR-3UTR GCA 90 bp CGGATGATACAAACAGGTCTGGGGTTCGTGGCTCTGGCAAGCGCCCAGAGACAAGATTCAACAGGCACCTaGCAAGTCCACACTCAGGAC +
Preference number: 2 (lower is better)
Translates to: RMIQTGLGFVALASAQRQDSTGT*QVHTQD
Trigger: GTCCTGAGTGTGGACTTGGCAGGTGCCTGTTGAATC...TTGTCTCTGGGCGCTTGCCAGAGCCACGAACCCCAGACCTGTTTGTATCATCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR-3UTR GCA 90 bp CCATCATCTTACGCCAGACTTCAGCCCTGCGGGAGCTGCTGCCTCCAAAGAAAGGATTCAACAGGCACCTaGCAAGTCCACACTCAGGAC +
Preference number: 2 (lower is better)
Translates to: PSSYARLQPCGSCCLQRKDSTGT*QVHTQD
Trigger: GTCCTGAGTGTGGACTTGGCAGGTGCCTGTTGAATC...CTTTCTTTGGAGGCAGCAGCTCCCGCAGGGCTGAAGTCTGGCGTAAGATGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR-3UTR GCA 90 bp TTCTCCCAGTTTAGAGGGAAAAGTCTATCTCAGGCCGACTCAGATGTGGCAGAAGACAGACACACGGCCTaGAGCAGCCCAGCCAGTCCC +
Preference number: 2 (lower is better)
Translates to: FSQFRGKSLSQADSDVAEDRHTA*SSPASP
Trigger: GGGACTGGCTGGGCTGCTGCAGGCCGTGTGTCTGTC...TTCTGCCACATCTGAGTCGGCCTGAGATAGACTTTTCCCTCTAAACTGGGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR-3UTR CCA 90 bp TCCCAGTTTAGAGGGAAAAGTCTATCTCAGGCCGACTCAGATGTGGCAGAAATAGTGGTGCAGCCACTCTaGGACCAGGCAGCTCCGGCC +
Preference number: 2 (lower is better)
Translates to: SQFRGKSLSQADSDVAEIVVQPL*DQAAPA
Trigger: GGCCGGAGCTGCCTGGTCCCAGAGTGGCTGCACCAC...TATTTCTGCCACATCTGAGTCGGCCTGAGATAGACTTTTCCCTCTAAACTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301633.8
ENST00000350051.8
3UTR-3UTR CCA 90 bp CGGATGATACAAACAGGTCTGGGGTTCGTGGCTCTGGCAAGCGCCCAGAGACAAAATAAACCCTGGAAGTaGTGCAGCCACTCTGGGACC +
Preference number: 2 (lower is better)
Translates to: RMIQTGLGFVALASAQRQNKPWK*CSHSGT
Trigger: GGTCCCAGAGTGGCTGCACCACTTCCAGGGTTTATT...TTGTCTCTGGGCGCTTGCCAGAGCCACGAACCCCAGACCTGTTTGTATCATCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301633.8
ENST00000350051.8
3UTR-3UTR CCA 90 bp ACAGCCGAGATGACCTCCAGAGGTTTCCAGCGAAGCTGTAACAATCCACCCTGCGACAGATGTGAAGGTTaGGCTGACAGACACACGGCC +
Preference number: 2 (lower is better)
Translates to: TAEMTSRGFQRSCNNPPCDRCEG*ADRHTA
Trigger: GGCCGTGTGTCTGTCAGCCCAACCTTCACATCTGTC...GCAGGGTGGATTGTTACAGCTTCGCTGGAAACCTCTGGAGGTCATCTCGGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR-3UTR TCA 90 bp GTTTGGCTTGCTGGTCTCTTCTGGGCAGCGGGCACTGCTGTCTCTACTTTCCAGACCCCGTTTCCCCAATaGCTTAGAATGGCTTTGTGC +
Preference number: 2 (lower is better)
Translates to: VWLAGLFWAAGTAVSTFQTPFPQ*LRMALC
Trigger: GCACAAAGCCATTCTAAGTCATTGGGGAAACGGGGT...CTGGAAAGTAGAGACAGCAGTGCCCGCTGCCCAGAAGAGACCAGCAAGCCAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR-3UTR CCA 90 bp TGCAGCTCAGATTCAACAGGCACCTGCCAAGTCCACACTCAGGACTGTGACAGCAATAAACCCTGGAAGTaGTGCAGCCACTCTGGGACC +
Preference number: 2 (lower is better)
Translates to: CSSDSTGTCQVHTQDCDSNKPWK*CSHSGT
Trigger: GGTCCCAGAGTGGCTGCACCACTTCCAGGGTTTATT...GCTGTCACAGTCCTGAGTGTGGACTTGGCAGGTGCCTGTTGAATCTGAGCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301633.8
ENST00000350051.8
3UTR-3UTR CCA 90 bp TCCACATGGCGACAGCCTGCAATGGGGGCTCCAGTTTGGCTTGCTGGTCTCTTCAGGCAGAAGCACCTCTaGTGCCACTTTCAAGACAAA +
Preference number: 2 (lower is better)
Translates to: STWRQPAMGAPVWLAGLFRQKHL*CHFQDK
Trigger: TTTGTCTTGAAAGTGGCACCAGAGGTGCTTCTGCCT...GAAGAGACCAGCAAGCCAAACTGGAGCCCCCATTGCAGGCTGTCGCCATGTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR-3UTR CCA 90 bp TTTTTATTTCTCAGGAACAGCCGAGATGACCTCCAGAGGTTTCCAGCGAAGCTGAAGAAAGCGGGGACCTaGGCGGACTGCGTCTCTCCC +
Preference number: 2 (lower is better)
Translates to: FLFLRNSRDDLQRFPAKLKKAGT*ADCVSP
Trigger: GGGAGAGACGCAGTCCGCCCAGGTCCCCGCTTTCTT...CAGCTTCGCTGGAAACCTCTGGAGGTCATCTCGGCTGTTCCTGAGAAATAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR-3UTR CCA 90 bp ATTTTCAGTTGTTTCTGCCCGGAAGGAGCCCGGATGATACAAACAGGTCTGGGGTGGGCAGATGGCTGTTaGCAGGCTAGGGACGACGAT +
Preference number: 2 (lower is better)
Translates to: IFSCFCPEGARMIQTGLGWADGC*QARDDD
Trigger: ATCGTCGTCCCTAGCCTGCCAACAGCCATCTGCCCA...CCCCAGACCTGTTTGTATCATCCGGGCTCCTTCCGGGCAGAAACAACTGAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR-3UTR TCA 90 bp ACAGAAGCCGAGATCCACATCACCGCCTGGCATGCAAAGGAGTTGAAGACAAAAGTCTCCTCATCCACCTaGAGTTCACCCCGTTTCCCC +
Preference number: 2 (lower is better)
Translates to: TEAEIHITAWHAKELKTKVSSST*SSPRFP
Trigger: GGGGAAACGGGGTGAACTTCAGGTGGATGAGGAGAC...TTTTGTCTTCAACTCCTTTGCATGCCAGGCGGTGATGTGGATCTCGGCTTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR-3UTR GCA 90 bp GCACTTAGACAAGGGCCTACGGCTTTATTAACAGATGTCGAGGAAGCTTTCAGGGACGCTCATCCTCACTaGGGCTGTCTGGGCAGATGG +
Preference number: 2 (lower is better)
Translates to: ALRQGPTALLTDVEEAFRDAHPH*GCLGRW
Trigger: CCATCTGCCCAGACAGCCGCAGTGAGGATGAGCGTC...CCTGAAAGCTTCCTCGACATCTGTTAATAAAGCCGTAGGCCCTTGTCTAAGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR-3UTR GCA 90 bp ACAGCCGAGATGACCTCCAGAGGTTTCCAGCGAAGCTGTAACAATCCACCCTGCCAGAAGCACCTCTGGTaGCACTTTCAAGACAAAACA +
Preference number: 2 (lower is better)
Translates to: TAEMTSRGFQRSCNNPPCQKHLW*HFQDKT
Trigger: TGTTTTGTCTTGAAAGTGGCACCAGAGGTGCTTCTG...GCAGGGTGGATTGTTACAGCTTCGCTGGAAACCTCTGGAGGTCATCTCGGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR-3UTR GCA 90 bp GCACTTAGACAAGGGCCTACGGCTTTATTAACAGATGTCGAGGAAGCTTTCAGGCACTGTGGAAGGCTCTaGCCACGCGAACAAAGCTGT +
Preference number: 2 (lower is better)
Translates to: ALRQGPTALLTDVEEAFRHCGRL*PREQSC
Trigger: ACAGCTTTGTTCGCGTGGGCAGAGCCTTCCACAGTG...CCTGAAAGCTTCCTCGACATCTGTTAATAAAGCCGTAGGCCCTTGTCTAAGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR-3UTR CCA 90 bp CAAAAGGAGTATCTGCCAGACGCTTCCTATCACTCTATTCTGTCTCCTCATCCAGGCCCACAGGAAGGCTaGTGGCACCAGGGAATAAAC +
Preference number: 2 (lower is better)
Translates to: QKEYLPDASYHSILSPHPGPQEG*WHQGIN
Trigger: GTTTATTCCCTGGTGCCACCAGCCTTCCTGTGGGCC...TGGATGAGGAGACAGAATAGAGTGATAGGAAGCGTCTGGCAGATACTCCTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301633.8
ENST00000350051.8
3UTR CAA 90 bp GACTCAGATGTGGCAGAAATAAGTGGGTCTGAAGTGCATTTTCAGTaGTTTCTGCCCGGAAGGAGCCCGGATGATACAAACAGGTCTGGG +
Preference number: 2 (lower is better)
Translates to: DSDVAEISGSEVHFQ*FLPGRSPDDTNRSG
Trigger: CCCAGACCTGTTTGTATCATCCGGGCTCCTTCCGGGCAGAAACAACTGAAAATGCACTTCAGACCCACTTATTTCTGCCACATCTGAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR-3UTR TCA 90 bp AAAAGGAGTATCTGCCAGACGCTTCCTATCACTCTATTCTGTCTCCTCATCCACGAGGAGGCACAGGTGTaGCAGATAAGGAACCTGCAG +
Preference number: 2 (lower is better)
Translates to: KRSICQTLPITLFCLLIHEEAQV*QIRNLQ
Trigger: CTGCAGGTTCCTTATCTGTCACACCTGTGCCTCCTC...GTGGATGAGGAGACAGAATAGAGTGATAGGAAGCGTCTGGCAGATACTCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR-3UTR TCA 90 bp CCTTCCTCTTCATGTCCAGTTAAACAGACCCTGGCAAACATCAGGCTCTTCCTCCCTTTGCCTTTCTCCTaGAACTCCTGGAGGAAAGTC +
Preference number: 2 (lower is better)
Translates to: PSSSCPVKQTLANIRLFLPLPFS*NSWRKV
Trigger: GACTTTCCTCCAGGAGTTTCAGGAGAAAGGCAAAGG...GAGGAAGAGCCTGATGTTTGCCAGGGTCTGTTTAACTGGACATGAAGAGGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590925.6
3UTR-3UTR GCA 90 bp TTCTCCCAGTTTAGAGGGAAAAGTCTATCTCAGGCCGACTCAGATGTGGCAGAAGATTCAACAGGCACCTaGCAAGTCCACACTCAGGAC +
Preference number: 2 (lower is better)
Translates to: FSQFRGKSLSQADSDVAEDSTGT*QVHTQD
Trigger: GTCCTGAGTGTGGACTTGGCAGGTGCCTGTTGAATC...TTCTGCCACATCTGAGTCGGCCTGAGATAGACTTTTCCCTCTAAACTGGGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR-3UTR GCA 90 bp ACAGAAGCCGAGATCCACATCACCGCCTGGCATGCAAAGGAGTTGAAGACAAAATGTAACAATCCACCCTaGAGCTCTATGACAGGGAGG +
Preference number: 2 (lower is better)
Translates to: TEAEIHITAWHAKELKTKCNNPP*SSMTGR
Trigger: CCTCCCTGTCATAGAGCTGCAGGGTGGATTGTTACA...TTTTGTCTTCAACTCCTTTGCATGCCAGGCGGTGATGTGGATCTCGGCTTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR-3UTR TCA 90 bp CAGAGCCTTCCTCTTCATGTCCAGTTAAACAGACCCTGGCAAACATCAGGCTCTCTTCCAGTCCCTCCCTaGATCTGGCTTCCAATTTTT +
Preference number: 2 (lower is better)
Translates to: QSLPLHVQLNRPWQTSGSLPVPP*IWLPIF
Trigger: AAAAATTGGAAGCCAGATTCAGGGAGGGACTGGAAG...AGAGCCTGATGTTTGCCAGGGTCTGTTTAACTGGACATGAAGAGGAAGGCTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586192.5
ENST00000587746.5
ENST00000590925.6
ENST00000591800.1
ENST00000592734.5
3UTR-3UTR CCA 90 bp AAGTCATTTAAAAAGGATTTAGGCCACTGCCTTTTTCTGAGGGAGGAGCGGCCACCAGGGAATAAACCCTaGAAGTGGTGCAGCCACTCT +
Preference number: 2 (lower is better)
Translates to: KSFKKDLGHCLFLREERPPGNKP*KWCSHS
Trigger: AGAGTGGCTGCACCACTTCCAGGGTTTATTCCCTGG...TGGCCGCTCCTCCCTCAGAAAAAGGCAGTGGCCTAAATCCTTTTTAAATGACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000301633.8
ENST00000350051.8
3UTR-3UTR TCA 90 bp TCAAAAATAAGCAGCTTAGATGAGTACAGAGGCTGGAGTGCATTTTCTGCTAACCAGGAACAGCCGAGATaGCCTCCAGAGGTTTCCAGC +
Preference number: 2 (lower is better)
Translates to: SKISSLDEYRGWSAFSANQEQPR*PPEVSS
Trigger: GCTGGAAACCTCTGGAGGTCATCTCGGCTGTTCCTG...GTTAGCAGAAAATGCACTCCAGCCTCTGTACTCATCTAAGCTGCTTATTTTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR-3UTR GCA 90 bp GCTTTTTATTTCTCAGGAACAGCCGAGATGACCTCCAGAGGTTTCCAGCGAAGCCAGAAGCACCTCTGGTaGCACTTTCAAGACAAAACA +
Preference number: 2 (lower is better)
Translates to: AFYFSGTAEMTSRGFQRSQKHLW*HFQDKT
Trigger: TGTTTTGTCTTGAAAGTGGCACCAGAGGTGCTTCTG...GCTTCGCTGGAAACCTCTGGAGGTCATCTCGGCTGTTCCTGAGAAATAAAAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR-3UTR GCA 90 bp GCACTTAGACAAGGGCCTACGGCTTTATTAACAGATGTCGAGGAAGCTTTCAGGGGCAAAAGGAGTATCTaGCAGACGCTTCCTATCACT +
Preference number: 2 (lower is better)
Translates to: ALRQGPTALLTDVEEAFRGKRSI*QTLPIT
Trigger: AGTGATAGGAAGCGTCTGGCAGATACTCCTTTTGCC...CCTGAAAGCTTCCTCGACATCTGTTAATAAAGCCGTAGGCCCTTGTCTAAGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR-3UTR GCA 90 bp CACAACCCTTCCCAGACTCCACTCCAACTTAGAGAACCTGAAAAATGGACATGTTGTAACAATCCACCCTaGAGCTCTATGACAGGGAGG +
Preference number: 2 (lower is better)
Translates to: HNPSQTPLQLREPEKWTCCNNPP*SSMTGR
Trigger: CCTCCCTGTCATAGAGCTGCAGGGTGGATTGTTACA...ACATGTCCATTTTTCAGGTTCTCTAAGTTGGAGTGGAGTCTGGGAAGGGTTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR-3UTR CCA 90 bp CTCCAACTTAGAGAACCTGAAAAATGGACATGTGGACATGTATCTGAAAGAAAGCTCACTGCGGCTGTCTaGGCAGATGGCTGTTGGCAG +
Preference number: 2 (lower is better)
Translates to: LQLREPEKWTCGHVSERKLTAAV*ADGCWQ
Trigger: CTGCCAACAGCCATCTGCCCAGACAGCCGCAGTGAG...CTTTCTTTCAGATACATGTCCACATGTCCATTTTTCAGGTTCTCTAAGTTGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR-3UTR CCA 90 bp CACAACCCTTCCCAGACTCCACTCCAACTTAGAGAACCTGAAAAATGGACATGTATCCACATCACCGCCTaGCATGCAAAGGAGTTGAAG +
Preference number: 2 (lower is better)
Translates to: HNPSQTPLQLREPEKWTCIHITA*HAKELK
Trigger: CTTCAACTCCTTTGCATGCCAGGCGGTGATGTGGAT...ACATGTCCATTTTTCAGGTTCTCTAAGTTGGAGTGGAGTCTGGGAAGGGTTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR-3UTR TCA 90 bp GTCCAGTTAAACAGACCCTGGCAAACATCAGGCTCTTCCTCGAACAGAAATTCTCTTCCAGTCCCTCCCTaGATCTGGCTTCCAATTTTT +
Preference number: 2 (lower is better)
Translates to: VQLNRPWQTSGSSSNRNSLPVPP*IWLPIF
Trigger: AAAAATTGGAAGCCAGATTCAGGGAGGGACTGGAAG...AGAATTTCTGTTCGAGGAAGAGCCTGATGTTTGCCAGGGTCTGTTTAACTGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586192.5
ENST00000587746.5
ENST00000590925.6
ENST00000591800.1
ENST00000592734.5
3UTR-3UTR TCA 90 bp TGTCCAGTTAAACAGACCCTGGCAAACATCAGGCTCTTCCTCGAACAGAAATTCCTTCCAGTCCCTCCCTaGATCTGGCTTCCAATTTTT +
Preference number: 2 (lower is better)
Translates to: CPVKQTLANIRLFLEQKFLPVPP*IWLPIF
Trigger: AAAAATTGGAAGCCAGATTCAGGGAGGGACTGGAAG...GAATTTCTGTTCGAGGAAGAGCCTGATGTTTGCCAGGGTCTGTTTAACTGGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586192.5
ENST00000587746.5
ENST00000590925.6
ENST00000591800.1
ENST00000592734.5
3UTR-3UTR GCA 90 bp TCAAAAATAAGCAGCTTAGATGAGTACAGAGGCTGGAGTGCATTTTCTGCTAACAGACAACTGCGTCTCTaGCAGGACGCTCATCCTCAC +
Preference number: 2 (lower is better)
Translates to: SKISSLDEYRGWSAFSANRQLRL*QDAHPH
Trigger: GTGAGGATGAGCGTCCTGGCAGAGACGCAGTTGTCT...GTTAGCAGAAAATGCACTCCAGCCTCTGTACTCATCTAAGCTGCTTATTTTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR-3UTR GCA 90 bp GTCCAGTTAAACAGACCCTGGCAAACATCAGGCTCTTCCTCGAACAGAAATTCTGCGCAACCGGACGAATaGTTTTTATGTTCCTCTCTC +
Preference number: 2 (lower is better)
Translates to: VQLNRPWQTSGSSSNRNSAQPDE*FLCSSL
Trigger: GAGAGAGGAACATAAAAAGCATTCGTCCGGTTGCGC...AGAATTTCTGTTCGAGGAAGAGCCTGATGTTTGCCAGGGTCTGTTTAACTGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591800.1
3UTR-3UTR GCA 90 bp CAGAGCCTTCCTCTTCATGTCCAGTTAAACAGACCCTGGCAAACATCAGGCTCTGAACAGAAATTCTTTTaGTTCCAGTCCCTCCCTGAA +
Preference number: 2 (lower is better)
Translates to: QSLPLHVQLNRPWQTSGSEQKFF*FQSLPE
Trigger: TTCAGGGAGGGACTGGAAGCAAAAGAATTTCTGTTC...AGAGCCTGATGTTTGCCAGGGTCTGTTTAACTGGACATGAAGAGGAAGGCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000586192.5
ENST00000587746.5
ENST00000590925.6
ENST00000591800.1
ENST00000592734.5
3UTR-3UTR GCA 90 bp CCTTCCTCTTCATGTCCAGTTAAACAGACCCTGGCAAACATCAGGCTCTTCCTCGAACAGAAATTCTTTTaGTTCCAGTCCCTCCCTGAA +
Preference number: 2 (lower is better)
Translates to: PSSSCPVKQTLANIRLFLEQKFF*FQSLPE
Trigger: TTCAGGGAGGGACTGGAAGCAAAAGAATTTCTGTTC...GAGGAAGAGCCTGATGTTTGCCAGGGTCTGTTTAACTGGACATGAAGAGGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000586192.5
ENST00000587746.5
ENST00000590925.6
ENST00000591800.1
ENST00000592734.5
3UTR-3UTR CCA 90 bp TTTCTGCTAACAAAAACCACTGTGATATTCTCCCAGTTTAGAGGGAAAAGTCTATGCCCCGCGGCTCACTaGGCCTGTCTAATCACACAG +
Preference number: 2 (lower is better)
Translates to: FLLTKTTVIFSQFRGKSLCPAAH*ACLITQ
Trigger: CTGTGTGATTAGACAGGCCCAGTGAGCCGCGGGGCA...TAGACTTTTCCCTCTAAACTGGGAGAATATCACAGTGGTTTTTGTTAGCAGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR-3UTR CCA 90 bp CACTCCAACTTAGAGAACCTGAAAAATGGACATGTGGACATGTATCTGAAAGAATGGGCAGATGGCTGTTaGCAGGCTAGGGACGACGAT +
Preference number: 2 (lower is better)
Translates to: HSNLENLKNGHVDMYLKEWADGC*QARDDD
Trigger: ATCGTCGTCCCTAGCCTGCCAACAGCCATCTGCCCA...TTCTTTCAGATACATGTCCACATGTCCATTTTTCAGGTTCTCTAAGTTGGAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR-3UTR GCA 90 bp TTTCTGCTAACAAAAACCACTGTGATATTCTCCCAGTTTAGAGGGAAAAGTCTAAAACCCTGGAAGTGGTaGAGCCACTCTGGGACCAGG +
Preference number: 2 (lower is better)
Translates to: FLLTKTTVIFSQFRGKSLKPWKW*SHSGTR
Trigger: CCTGGTCCCAGAGTGGCTGCACCACTTCCAGGGTTT...TAGACTTTTCCCTCTAAACTGGGAGAATATCACAGTGGTTTTTGTTAGCAGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301633.8
ENST00000350051.8
3UTR CCA 72 bp CTGCGGGAGCTGCTGCCTCCAAAGAAAGCGGGGACCTaGGCGGACTGCGTCTCTCCCCCGTGTGGAGAACGT +
Preference number: 3 (lower is better)
Translates to: LRELLPPKKAGT*ADCVSPPCGER
Trigger: ACGTTCTCCACACGGGGGAGAGACGCAGTCCGCCCAGGTCCCCGCTTTCTTTGGAGGCAGCAGCTCCCGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR GCA 72 bp GTGGCTCTGGCAAGCGCCCAGAGACAACTGCGTCTCTaGCAGGACGCTCATCCTCACTGCGGCTGTCTGGGC +
Preference number: 3 (lower is better)
Translates to: VALASAQRQLRL*QDAHPHCGCLG
Trigger: GCCCAGACAGCCGCAGTGAGGATGAGCGTCCTGGCAGAGACGCAGTTGTCTCTGGGCGCTTGCCAGAGCCAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR GCA 72 bp GACAGATGTGAAGGTTGGGCTGACAGACACACGGCCTaGAGCAGCCCAGCCAGTCCCCCACAGCATCGAGCC +
Preference number: 3 (lower is better)
Translates to: DRCEGWADRHTA*SSPASPPQHRA
Trigger: GGCTCGATGCTGTGGGGGACTGGCTGGGCTGCTGCAGGCCGTGTGTCTGTCAGCCCAACCTTCACATCTGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR GCA 72 bp TCATCTTACGCCAGACTTCAGCCCTGCGGGAGCTGCTaGCTCCAAAGAAAGCGGGGACCTGGGCGGACTGCG +
Preference number: 3 (lower is better)
Translates to: SSYARLQPCGSC*LQRKRGPGRTA
Trigger: CGCAGTCCGCCCAGGTCCCCGCTTTCTTTGGAGGCAGCAGCTCCCGCAGGGCTGAAGTCTGGCGTAAGATGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR CCA 72 bp GGAAGGCTGGTGGCACCAGGGAATAAACCCTGGAAGTaGTGCAGCCACTCTGGGACCAGGCAGCTCCGGCCA +
Preference number: 3 (lower is better)
Translates to: GRLVAPGNKPWK*CSHSGTRQLRP
Trigger: TGGCCGGAGCTGCCTGGTCCCAGAGTGGCTGCACCACTTCCAGGGTTTATTCCCTGGTGCCACCAGCCTTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301633.8
ENST00000350051.8
3UTR GCA 72 bp CCACTGCCTTTTTCTGAGGGAGGAGCGGCCAGCATGTaGCCCGCGGCTCACTGGGCCTGTCTAATCACACAG +
Preference number: 3 (lower is better)
Translates to: PLPFSEGGAASM*PAAHWACLITQ
Trigger: CTGTGTGATTAGACAGGCCCAGTGAGCCGCGGGGCACATGCTGGCCGCTCCTCCCTCAGAAAAAGGCAGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR GCA 72 bp CTGCTGCCTCCAAAGAAAGCGGGGACCTGGGCGGACTaGGTCTCTCCCCCGTGTGGAGAACGTGACAGATGT +
Preference number: 3 (lower is better)
Translates to: LLPPKKAGTWAD*VSPPCGERDRC
Trigger: ACATCTGTCACGTTCTCCACACGGGGGAGAGACGCAGTCCGCCCAGGTCCCCGCTTTCTTTGGAGGCAGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR GCA 72 bp CCATCATCTTACGCCAGACTTCAGCCCTGCGGGAGCTaGTGCCTCCAAAGAAAGCGGGGACCTGGGCGGACT +
Preference number: 3 (lower is better)
Translates to: PSSYARLQPCGS*CLQRKRGPGRT
Trigger: AGTCCGCCCAGGTCCCCGCTTTCTTTGGAGGCAGCAGCTCCCGCAGGGCTGAAGTCTGGCGTAAGATGATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR GCA 72 bp ATGGCGACAGCCTGCAATGGGGGCTCCAGTTTGGCTTaGTGGTCTCTTCTGGGCAGCGGGCACTGCTGTCTC +
Preference number: 3 (lower is better)
Translates to: MATACNGGSSLA*WSLLGSGHCCL
Trigger: GAGACAGCAGTGCCCGCTGCCCAGAAGAGACCAGCAAGCCAAACTGGAGCCCCCATTGCAGGCTGTCGCCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR CCA 72 bp CCCACAGGAAGGCTGGTGGCACCAGGGAATAAACCCTaGAAGTGGTGCAGCCACTCTGGGACCAGGCAGCTC +
Preference number: 3 (lower is better)
Translates to: PTGRLVAPGNKP*KWCSHSGTRQL
Trigger: GAGCTGCCTGGTCCCAGAGTGGCTGCACCACTTCCAGGGTTTATTCCCTGGTGCCACCAGCCTTCCTGTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301633.8
ENST00000350051.8
3UTR CCA 72 bp GTCTCTGCCAGGACGCTCATCCTCACTGCGGCTGTCTaGGCAGATGGCTGTTGGCAGGCTAGGGACGACGAT +
Preference number: 3 (lower is better)
Translates to: VSARTLILTAAV*ADGCWQARDDD
Trigger: ATCGTCGTCCCTAGCCTGCCAACAGCCATCTGCCCAGACAGCCGCAGTGAGGATGAGCGTCCTGGCAGAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR CCA 72 bp CTGGGCAGCGGGCACTGCTGTCTCTACTTTCCAGGATaGCAGTTGGCCCGAGGGGCTCTAACCTGCCATTGG +
Preference number: 3 (lower is better)
Translates to: LGSGHCCLYFPG*QLARGALTCHW
Trigger: CCAATGGCAGGTTAGAGCCCCTCGGGCCAACTGCCATCCTGGAAAGTAGAGACAGCAGTGCCCGCTGCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR CCA 72 bp GCGACAGCCTGCAATGGGGGCTCCAGTTTGGCTTGCTaGTCTCTTCTGGGCAGCGGGCACTGCTGTCTCTAC +
Preference number: 3 (lower is better)
Translates to: ATACNGGSSLAC*SLLGSGHCCLY
Trigger: GTAGAGACAGCAGTGCCCGCTGCCCAGAAGAGACCAGCAAGCCAAACTGGAGCCCCCATTGCAGGCTGTCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR GCA 72 bp GAGAGAGAAGCAGCCACTGTTACCAGCAGCACCCGCTaGACAGGCAGAAGCACCTCTGGTGCCACTTTCAAG +
Preference number: 3 (lower is better)
Translates to: EREAATVTSSTR*TGRSTSGATFK
Trigger: CTTGAAAGTGGCACCAGAGGTGCTTCTGCCTGTGCAGCGGGTGCTGCTGGTAACAGTGGCTGCTTCTCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR GCA 72 bp TTTCCAGGATGGCAGTTGGCCCGAGGGGCTCTAACCTaGCATTGGAACCTCACCCATAGCCCAGAAGCCTCA +
Preference number: 3 (lower is better)
Translates to: FPGWQLARGALT*HWNLTHSPEAS
Trigger: TGAGGCTTCTGGGCTATGGGTGAGGTTCCAATGGCAGGTTAGAGCCCCTCGGGCCAACTGCCATCCTGGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR GCA 72 bp AGTTTGGCTTGCTGGTCTCTTCTGGGCAGCGGGCACTaGTGTCTCTACTTTCCAGGATGGCAGTTGGCCCGA +
Preference number: 3 (lower is better)
Translates to: SLACWSLLGSGH*CLYFPGWQLAR
Trigger: TCGGGCCAACTGCCATCCTGGAAAGTAGAGACAGCAGTGCCCGCTGCCCAGAAGAGACCAGCAAGCCAAACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR CCA 72 bp TGTGAGTTACTCTTTCCACATGGCGACAGCCTGCAATaGGGGCTCCAGTTTGGCTTGCTGGTCTCTTCTGGG +
Preference number: 3 (lower is better)
Translates to: CELLFPHGDSLQ*GLQFGLLVSSG
Trigger: CCCAGAAGAGACCAGCAAGCCAAACTGGAGCCCCCATTGCAGGCTGTCGCCATGTGGAAAGAGTAACTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR TCA 72 bp GCATTTTCAGTTGTTTCTGCCCGGAAGGAGCCCGGATaGTACAAACAGGTCTGGGGTTCGTGGCTCTGGCAA +
Preference number: 3 (lower is better)
Translates to: AFSVVSARKEPG*YKQVWGSWLWQ
Trigger: TTGCCAGAGCCACGAACCCCAGACCTGTTTGTATCATCCGGGCTCCTTCCGGGCAGAAACAACTGAAAATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR CCA 72 bp TTTCCTAAGACATTGCTAAGGGGCCCACAGGAAGGCTaGTGGCACCAGGGAATAAACCCTGGAAGTGGTGCA +
Preference number: 3 (lower is better)
Translates to: FPKTLLRGPQEG*WHQGINPGSGA
Trigger: TGCACCACTTCCAGGGTTTATTCCCTGGTGCCACCAGCCTTCCTGTGGGCCCCTTAGCAATGTCTTAGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301633.8
ENST00000350051.8
3UTR CCA 72 bp TACCAGCAGCACCCGCTGCACAGGCAGAAGCACCTCTaGTGCCACTTTCAAGACAAAACAAGAGCACAGTTG +
Preference number: 3 (lower is better)
Translates to: YQQHPLHRQKHL*CHFQDKTRAQL
Trigger: CAACTGTGCTCTTGTTTTGTCTTGAAAGTGGCACCAGAGGTGCTTCTGCCTGTGCAGCGGGTGCTGCTGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR CCA 72 bp CAGCCTCAACAACATGAGGTCCAGACACATTCACTGTaGAAGGCTCTGCCCACGCGAACAAAGCTGTCAGCT +
Preference number: 3 (lower is better)
Translates to: QPQQHEVQTHSL*KALPTRTKLSA
Trigger: AGCTGACAGCTTTGTTCGCGTGGGCAGAGCCTTCCACAGTGAATGTGTCTGGACCTCATGTTGTTGAGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR GCA 72 bp CAGCAGCACCCGCTGCACAGGCAGAAGCACCTCTGGTaGCACTTTCAAGACAAAACAAGAGCACAGTTGAAA +
Preference number: 3 (lower is better)
Translates to: QQHPLHRQKHLW*HFQDKTRAQLK
Trigger: TTTCAACTGTGCTCTTGTTTTGTCTTGAAAGTGGCACCAGAGGTGCTTCTGCCTGTGCAGCGGGTGCTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR GCA 72 bp TCCAGAGGTTTCCAGCGAAGCTGTAACAATCCACCCTaGAGCTCTATGACAGGGAGGAGGGCGAATCAAATC +
Preference number: 3 (lower is better)
Translates to: SRGFQRSCNNPP*SSMTGRRANQI
Trigger: GATTTGATTCGCCCTCCTCCCTGTCATAGAGCTGCAGGGTGGATTGTTACAGCTTCGCTGGAAACCTCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR GCA 72 bp GCAATTGTGAGTTACTCTTTCCACATGGCGACAGCCTaGAATGGGGGCTCCAGTTTGGCTTGCTGGTCTCTT +
Preference number: 3 (lower is better)
Translates to: AIVSYSFHMATA*NGGSSLACWSL
Trigger: AAGAGACCAGCAAGCCAAACTGGAGCCCCCATTGCAGGCTGTCGCCATGTGGAAAGAGTAACTCACAATTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR GCA 72 bp TGCTTCTTGACAGAAAGGAAAGCGCAACCGGACGAATaGTTTTTATGTTCCTCTCTCGTGATCCGCCCGCCT +
Preference number: 3 (lower is better)
Translates to: CFLTERKAQPDE*FLCSSLVIRPP
Trigger: AGGCGGGCGGATCACGAGAGAGGAACATAAAAAGCATTCGTCCGGTTGCGCTTTCCTTTCTGTCAAGAAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591800.1
3UTR TCA 72 bp CGCTTCCTATCACTCTATTCTGTCTCCTCATCCACCTaGAGTTCACCCCGTTTCCCCAATGACTTAGAATGG +
Preference number: 3 (lower is better)
Translates to: RFLSLYSVSSST*SSPRFPNDLEW
Trigger: CCATTCTAAGTCATTGGGGAAACGGGGTGAACTTCAGGTGGATGAGGAGACAGAATAGAGTGATAGGAAGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR TCA 72 bp TGGACGTTCCTGGGAGTTCACAACAACAGGGTCTGCTaGTGTATTCTGTTGAACATGAAAGGCATCAGGCAT +
Preference number: 3 (lower is better)
Translates to: WTFLGVHNNRVC*CILLNMKGIRH
Trigger: ATGCCTGATGCCTTTCATGTTCAACAGAATACATCAGCAGACCCTGTTGTTGTGAACTCCCAGGAACGTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590449.1
3UTR CCA 72 bp CAGAGCCTTCCTCTTCATGTCCAGTTAAACAGACCCTaGCAAACATCAGGCTCTTCCTCGAACAGAAATTCT +
Preference number: 3 (lower is better)
Translates to: QSLPLHVQLNRP*QTSGSSSNRNS
Trigger: AGAATTTCTGTTCGAGGAAGAGCCTGATGTTTGCCAGGGTCTGTTTAACTGGACATGAAGAGGAAGGCTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586192.5
ENST00000587746.5
ENST00000590925.6
ENST00000591800.1
ENST00000592734.5
CDS-3UTR GCA 90 bp AGACTTCAGCCCTGCGGGAGCTGCTGCCTCCAAAGAAAGCGGGGACCTGGGCGGGGAGCGGCCAGCATGTaGCCCGCGGCTCACTGGGCC +
Preference number: 4 (lower is better)
Translates to: RLQPCGSCCLQRKRGPGRGAASM*PAAHWA
Trigger: GGCCCAGTGAGCCGCGGGGCACATGCTGGCCGCTCC...CCGCCCAGGTCCCCGCTTTCTTTGGAGGCAGCAGCTCCCGCAGGGCTGAAGTCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR GCA 90 bp TTCAGCCCTGCGGGAGCTGCTGCCTCCAAAGAAAGCGGGGACCTGGGCGGACTGCCATCCGCTCCGGGGTaGAGGCGCAGCCCTCCAAGA +
Preference number: 4 (lower is better)
Translates to: FSPAGAAASKESGDLGGLPSAPG*RRSPPR
Trigger: TCTTGGAGGGCTGCGCCTGCACCCCGGAGCGGATGG...CAGTCCGCCCAGGTCCCCGCTTTCTTTGGAGGCAGCAGCTCCCGCAGGGCTGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR GCA 90 bp GCCTCCAAAGAAAGCGGGGACCTGGGCGGACTGCGTCTCTCCCCCGTGTGGAGAGGGACCTGGGCGGACTaGGTCTCTCCCCCGTGTGGA +
Preference number: 4 (lower is better)
Translates to: ASKESGDLGGLRLSPVWRGTWAD*VSPPCG
Trigger: TCCACACGGGGGAGAGACGCAGTCCGCCCAGGTCCC...TCTCCACACGGGGGAGAGACGCAGTCCGCCCAGGTCCCCGCTTTCTTTGGAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR TCA 90 bp GCCTCCAAAGAAAGCGGGGACCTGGGCGGACTGCGTCTCTCCCCCGTGTGGAGACAGTGGGGCAGTGGATaGAGCCAGCCTCGGCCATCC +
Preference number: 4 (lower is better)
Translates to: ASKESGDLGGLRLSPVWRQWGSG*SQPRPS
Trigger: GGATGGCCGAGGCTGGCTTCATCCACTGCCCCACTG...TCTCCACACGGGGGAGAGACGCAGTCCGCCCAGGTCCCCGCTTTCTTTGGAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR GCA 90 bp GGCTCTGGCAAGCGCCCAGAGACAACTGCGTCTCTGCCAGGACGCTCATCCTCACGCCGCCGCCACCTCTaGCAACGGGTCCCGCGATTC +
Preference number: 4 (lower is better)
Translates to: GSGKRPETTASLPGRSSSRRRHL*QRVPRF
Trigger: GAATCGCGGGACCCGTTGGCAGAGGTGGCGGCGGCG...TGAGGATGAGCGTCCTGGCAGAGACGCAGTTGTCTCTGGGCGCTTGCCAGAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR GCA 90 bp GGATGGCAGTTGGCCCGAGGGGCTCTAACCTGCCATTGGAACCTCACCCATAGCACGTCGGGGCACCCATaGCGCCGCCGCCACCTCTGC +
Preference number: 4 (lower is better)
Translates to: GWQLARGALTCHWNLTHSTSGHP*RRRHLC
Trigger: GCAGAGGTGGCGGCGGCGGCATGGGTGCCCCGACGT...GCTATGGGTGAGGTTCCAATGGCAGGTTAGAGCCCCTCGGGCCAACTGCCATCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR GCA 90 bp CGCCAGACTTCAGCCCTGCGGGAGCTGCTGCCTCCAAAGAAAGCGGGGACCTGGGACAGACACACGGCCTaGAGCAGCCCAGCCAGTCCC +
Preference number: 4 (lower is better)
Translates to: RQTSALRELLPPKKAGTWDRHTA*SSPASP
Trigger: GGGACTGGCTGGGCTGCTGCAGGCCGTGTGTCTGTC...CCAGGTCCCCGCTTTCTTTGGAGGCAGCAGCTCCCGCAGGGCTGAAGTCTGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CCA 90 bp CAGCCCTGCCCACAGCACAGGCTCACAGAAGCCGAGATCCACATCACCGCCTGGGTGGTGCAGCCACTCTaGGACCAGGCAGCTCCGGCC +
Preference number: 4 (lower is better)
Translates to: QPCPQHRLTEAEIHITAWVVQPL*DQAAPA
Trigger: GGCCGGAGCTGCCTGGTCCCAGAGTGGCTGCACCAC...CCAGGCGGTGATGTGGATCTCGGCTTCTGTGAGCCTGTGCTGTGGGCAGGGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR GCA 90 bp GCCTCCAAAGAAAGCGGGGACCTGGGCGGACTGCGTCTCTCCCCCGTGTGGAGATCCATGGCAGCCAGCTaGTCGATGGCACGGCGCACT +
Preference number: 4 (lower is better)
Translates to: ASKESGDLGGLRLSPVWRSMAAS*SMARRT
Trigger: AGTGCGCCGTGCCATCGAGCAGCTGGCTGCCATGGA...TCTCCACACGGGGGAGAGACGCAGTCCGCCCAGGTCCCCGCTTTCTTTGGAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR GCA 90 bp AAGCGCCCAGAGACAACTGCGTCTCTGCCAGGACGCTCATCCTCACTGCGGCTGGGGACCTGGGCGGACTaGGTCTCTCCCCCGTGTGGA +
Preference number: 4 (lower is better)
Translates to: KRPETTASLPGRSSSLRLGTWAD*VSPPCG
Trigger: TCCACACGGGGGAGAGACGCAGTCCGCCCAGGTCCC...CAGCCGCAGTGAGGATGAGCGTCCTGGCAGAGACGCAGTTGTCTCTGGGCGCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR GCA 90 bp AGACTTCAGCCCTGCGGGAGCTGCTGCCTCCAAAGAAAGCGGGGACCTGGGCGGCCCTGCGGGAGCTGCTaGCTCCAAAGAAAGCGGGGA +
Preference number: 4 (lower is better)
Translates to: RLQPCGSCCLQRKRGPGRPCGSC*LQRKRG
Trigger: TCCCCGCTTTCTTTGGAGGCAGCAGCTCCCGCAGGG...CCGCCCAGGTCCCCGCTTTCTTTGGAGGCAGCAGCTCCCGCAGGGCTGAAGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CCA 90 bp GGCTCTGGCAAGCGCCCAGAGACAACTGCGTCTCTGCCAGGACGCTCATCCTCAGTGGTGCAGCCACTCTaGGACCAGGCAGCTCCGGCC +
Preference number: 4 (lower is better)
Translates to: GSGKRPETTASLPGRSSSVVQPL*DQAAPA
Trigger: GGCCGGAGCTGCCTGGTCCCAGAGTGGCTGCACCAC...TGAGGATGAGCGTCCTGGCAGAGACGCAGTTGTCTCTGGGCGCTTGCCAGAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CCA 90 bp CGCCAGACTTCAGCCCTGCGGGAGCTGCTGCCTCCAAAGAAAGCGGGGACCTGGCAGGTCTGGGGTTCGTaGCTCTGGCAAGCGCCCAGA +
Preference number: 4 (lower is better)
Translates to: RQTSALRELLPPKKAGTWQVWGS*LWQAPR
Trigger: TCTGGGCGCTTGCCAGAGCCACGAACCCCAGACCTG...CCAGGTCCCCGCTTTCTTTGGAGGCAGCAGCTCCCGCAGGGCTGAAGTCTGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CCA 90 bp GGAGCTGCTGCCTCCAAAGAAAGCGGGGACCTGGGCGGACTGCGTCTCTCCCCCGGCGACAGCCTGCAATaGGGGCTCCAGTTTGGCTTG +
Preference number: 4 (lower is better)
Translates to: GAAASKESGDLGGLRLSPGDSLQ*GLQFGL
Trigger: CAAGCCAAACTGGAGCCCCCATTGCAGGCTGTCGCC...GGGGGAGAGACGCAGTCCGCCCAGGTCCCCGCTTTCTTTGGAGGCAGCAGCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR TCA 90 bp TTCAGCCCTGCGGGAGCTGCTGCCTCCAAAGAAAGCGGGGACCTGGGCGGACTGAGATGCGGTGGTCCTTaGGAAAGGGCTGCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: FSPAGAAASKESGDLGGLRCGGP*ERAARQ
Trigger: CTGCCTGGCAGCCCTTTCTCAAGGACCACCGCATCT...CAGTCCGCCCAGGTCCCCGCTTTCTTTGGAGGCAGCAGCTCCCGCAGGGCTGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CCA 90 bp TTCAGCCCTGCGGGAGCTGCTGCCTCCAAAGAAAGCGGGGACCTGGGCGGACTGTTCTCAGTGGGGCAGTaGATGAAGCCAGCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: FSPAGAAASKESGDLGGLFSVGQ*MKPASA
Trigger: GGCCGAGGCTGGCTTCATCCACTGCCCCACTGAGAA...CAGTCCGCCCAGGTCCCCGCTTTCTTTGGAGGCAGCAGCTCCCGCAGGGCTGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CCA 90 bp GGAGCTGCTGCCTCCAAAGAAAGCGGGGACCTGGGCGGACTGCGTCTCTCCCCCGGCCCACAGGAAGGCTaGTGGCACCAGGGAATAAAC +
Preference number: 4 (lower is better)
Translates to: GAAASKESGDLGGLRLSPGPQEG*WHQGIN
Trigger: GTTTATTCCCTGGTGCCACCAGCCTTCCTGTGGGCC...GGGGGAGAGACGCAGTCCGCCCAGGTCCCCGCTTTCTTTGGAGGCAGCAGCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CCA 90 bp TTCAGCCCTGCGGGAGCTGCTGCCTCCAAAGAAAGCGGGGACCTGGGCGGACTGTGCCCCGCGGCTCACTaGGCCTGTCTAATCACACAG +
Preference number: 4 (lower is better)
Translates to: FSPAGAAASKESGDLGGLCPAAH*ACLITQ
Trigger: CTGTGTGATTAGACAGGCCCAGTGAGCCGCGGGGCA...CAGTCCGCCCAGGTCCCCGCTTTCTTTGGAGGCAGCAGCTCCCGCAGGGCTGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CCA 90 bp GGAGCTGCTGCCTCCAAAGAAAGCGGGGACCTGGGCGGACTGCGTCTCTCCCCCTGGGCAGATGGCTGTTaGCAGGCTAGGGACGACGAT +
Preference number: 4 (lower is better)
Translates to: GAAASKESGDLGGLRLSPWADGC*QARDDD
Trigger: ATCGTCGTCCCTAGCCTGCCAACAGCCATCTGCCCA...GGGGGAGAGACGCAGTCCGCCCAGGTCCCCGCTTTCTTTGGAGGCAGCAGCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR GCA 90 bp CGGATGATACAAACAGGTCTGGGGTTCGTGGCTCTGGCAAGCGCCCAGAGACAACGCCGCCGCCACCTCTaGCAACGGGTCCCGCGATTC +
Preference number: 4 (lower is better)
Translates to: RMIQTGLGFVALASAQRQRRRHL*QRVPRF
Trigger: GAATCGCGGGACCCGTTGGCAGAGGTGGCGGCGGCG...TTGTCTCTGGGCGCTTGCCAGAGCCACGAACCCCAGACCTGTTTGTATCATCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR GCA 90 bp AAGCGCCCAGAGACAACTGCGTCTCTGCCAGGACGCTCATCCTCACTGCGGCTGTCCATGGCAGCCAGCTaGTCGATGGCACGGCGCACT +
Preference number: 4 (lower is better)
Translates to: KRPETTASLPGRSSSLRLSMAAS*SMARRT
Trigger: AGTGCGCCGTGCCATCGAGCAGCTGGCTGCCATGGA...CAGCCGCAGTGAGGATGAGCGTCCTGGCAGAGACGCAGTTGTCTCTGGGCGCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR GCA 90 bp CGCCAGACTTCAGCCCTGCGGGAGCTGCTGCCTCCAAAGAAAGCGGGGACCTGGAAACCCTGGAAGTGGTaGAGCCACTCTGGGACCAGG +
Preference number: 4 (lower is better)
Translates to: RQTSALRELLPPKKAGTWKPWKW*SHSGTR
Trigger: CCTGGTCCCAGAGTGGCTGCACCACTTCCAGGGTTT...CCAGGTCCCCGCTTTCTTTGGAGGCAGCAGCTCCCGCAGGGCTGAAGTCTGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR GCA 90 bp TGCAGCTCAGATTCAACAGGCACCTGCCAAGTCCACACTCAGGACTGTGACAGCGGAGCGGCCAGCATGTaGCCCGCGGCTCACTGGGCC +
Preference number: 4 (lower is better)
Translates to: CSSDSTGTCQVHTQDCDSGAASM*PAAHWA
Trigger: GGCCCAGTGAGCCGCGGGGCACATGCTGGCCGCTCC...GCTGTCACAGTCCTGAGTGTGGACTTGGCAGGTGCCTGTTGAATCTGAGCTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CCA 90 bp CGCCAGACTTCAGCCCTGCGGGAGCTGCTGCCTCCAAAGAAAGCGGGGACCTGGACACTGGGCCAAGTCTaGCTCGTTCTCAGTGGGGCA +
Preference number: 4 (lower is better)
Translates to: RQTSALRELLPPKKAGTWTLGQV*LVLSGA
Trigger: TGCCCCACTGAGAACGAGCCAGACTTGGCCCAGTGT...CCAGGTCCCCGCTTTCTTTGGAGGCAGCAGCTCCCGCAGGGCTGAAGTCTGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CCA 90 bp CAGACTTCAGCCCTGCGGGAGCTGCTGCCTCCAAAGAAAGCGGGGACCTGGGCGAATGGGGTCGTCATCTaGCTCCCAGCCTTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: QTSALRELLPPKKAGTWANGVVI*LPAFQL
Trigger: GAGCTGGAAGGCTGGGAGCCAGATGACGACCCCATT...CGCCCAGGTCCCCGCTTTCTTTGGAGGCAGCAGCTCCCGCAGGGCTGAAGTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301633.8
CDS-3UTR CCA 90 bp CGCCCAGAGACAACTGCGTCTCTGCCAGGACGCTCATCCTCACTGCGGCTGTCTAAGAAAGCGGGGACCTaGGCGGACTGCGTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: RPETTASLPGRSSSLRLSKKAGT*ADCVSP
Trigger: GGGAGAGACGCAGTCCGCCCAGGTCCCCGCTTTCTT...AGACAGCCGCAGTGAGGATGAGCGTCCTGGCAGAGACGCAGTTGTCTCTGGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CCA 90 bp GCCTCCAAAGAAAGCGGGGACCTGGGCGGACTGCGTCTCTCCCCCGTGTGGAGATCCAGTTTGGCTTGCTaGTCTCTTCTGGGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: ASKESGDLGGLRLSPVWRSSLAC*SLLGSG
Trigger: CCCGCTGCCCAGAAGAGACCAGCAAGCCAAACTGGA...TCTCCACACGGGGGAGAGACGCAGTCCGCCCAGGTCCCCGCTTTCTTTGGAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CCA 90 bp AGCCCTGCCCACAGCACAGGCTCACAGAAGCCGAGATCCACATCACCGCCTGGCGGCGACAGCCTGCAATaGGGGCTCCAGTTTGGCTTG +
Preference number: 4 (lower is better)
Translates to: SPAHSTGSQKPRSTSPPGGDSLQ*GLQFGL
Trigger: CAAGCCAAACTGGAGCCCCCATTGCAGGCTGTCGCC...GCCAGGCGGTGATGTGGATCTCGGCTTCTGTGAGCCTGTGCTGTGGGCAGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR TCA 90 bp TGGCAAGCGCCCAGAGACAACTGCGTCTCTGCCAGGACGCTCATCCTCACTGCGGCCACTGCCTTTTTCTaGGGGAGGAGCGGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: WQAPRDNCVSARTLILTAATAFF*GRSGQH
Trigger: ATGCTGGCCGCTCCTCCCTCAGAAAAAGGCAGTGGC...CGCAGTGAGGATGAGCGTCCTGGCAGAGACGCAGTTGTCTCTGGGCGCTTGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR GCA 90 bp AGGCTCACAGAAGCCGAGATCCACATCACCGCCTGGCATGCAAAGGAGTTGAAGCGCCGCCGCCACCTCTaGCAACGGGTCCCGCGATTC +
Preference number: 4 (lower is better)
Translates to: RLTEAEIHITAWHAKELKRRRHL*QRVPRF
Trigger: GAATCGCGGGACCCGTTGGCAGAGGTGGCGGCGGCG...CTTCAACTCCTTTGCATGCCAGGCGGTGATGTGGATCTCGGCTTCTGTGAGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR GCA 90 bp TGGCTTGCTGGTCTCTTCTGGGCAGCGGGCACTGCTGTCTCTACTTTCCAGGATCCATCCGCTCCGGGGTaGAGGCGCAGCCCTCCAAGA +
Preference number: 4 (lower is better)
Translates to: WLAGLFWAAGTAVSTFQDPSAPG*RRSPPR
Trigger: TCTTGGAGGGCTGCGCCTGCACCCCGGAGCGGATGG...ATCCTGGAAAGTAGAGACAGCAGTGCCCGCTGCCCAGAAGAGACCAGCAAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR GCA 90 bp GGCTCCAGTTTGGCTTGCTGGTCTCTTCTGGGCAGCGGGCACTGCTGTCTCTACCAGCCCTGCGGGAGCTaGTGCCTCCAAAGAAAGCGG +
Preference number: 4 (lower is better)
Translates to: GSSLACWSLLGSGHCCLYQPCGS*CLQRKR
Trigger: CCGCTTTCTTTGGAGGCAGCAGCTCCCGCAGGGCTG...GTAGAGACAGCAGTGCCCGCTGCCCAGAAGAGACCAGCAAGCCAAACTGGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR GCA 90 bp AAGCGCCCAGAGACAACTGCGTCTCTGCCAGGACGCTCATCCTCACTGCGGCTGGACGCTCATCCTCACTaGGGCTGTCTGGGCAGATGG +
Preference number: 4 (lower is better)
Translates to: KRPETTASLPGRSSSLRLDAHPH*GCLGRW
Trigger: CCATCTGCCCAGACAGCCGCAGTGAGGATGAGCGTC...CAGCCGCAGTGAGGATGAGCGTCCTGGCAGAGACGCAGTTGTCTCTGGGCGCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR GCA 90 bp GGCAAGCGCCCAGAGACAACTGCGTCTCTGCCAGGACGCTCATCCTCACTGCGGGGCTCCAGTTTGGCTTaGTGGTCTCTTCTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: GKRPETTASLPGRSSSLRGSSLA*WSLLGS
Trigger: GCTGCCCAGAAGAGACCAGCAAGCCAAACTGGAGCC...CCGCAGTGAGGATGAGCGTCCTGGCAGAGACGCAGTTGTCTCTGGGCGCTTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR GCA 90 bp GGCAAGCGCCCAGAGACAACTGCGTCTCTGCCAGGACGCTCATCCTCACTGCGGCACATGGCGACAGCCTaGAATGGGGGCTCCAGTTTG +
Preference number: 4 (lower is better)
Translates to: GKRPETTASLPGRSSSLRHMATA*NGGSSL
Trigger: CAAACTGGAGCCCCCATTGCAGGCTGTCGCCATGTG...CCGCAGTGAGGATGAGCGTCCTGGCAGAGACGCAGTTGTCTCTGGGCGCTTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CCA 90 bp GGCTCCAGTTTGGCTTGCTGGTCTCTTCTGGGCAGCGGGCACTGCTGTCTCTACCAGCCAGCTGCTCGATaGCACGGCGCACTTTCTCCG +
Preference number: 4 (lower is better)
Translates to: GSSLACWSLLGSGHCCLYQPAAR*HGALSP
Trigger: CGGAGAAAGTGCGCCGTGCCATCGAGCAGCTGGCTG...GTAGAGACAGCAGTGCCCGCTGCCCAGAAGAGACCAGCAAGCCAAACTGGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CCA 90 bp TGGCAAGCGCCCAGAGACAACTGCGTCTCTGCCAGGACGCTCATCCTCACTGCGTGGGGTTCGTGGCTCTaGCAAGCGCCCAGAGACAAC +
Preference number: 4 (lower is better)
Translates to: WQAPRDNCVSARTLILTAWGSWL*QAPRDN
Trigger: GTTGTCTCTGGGCGCTTGCCAGAGCCACGAACCCCA...CGCAGTGAGGATGAGCGTCCTGGCAGAGACGCAGTTGTCTCTGGGCGCTTGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CCA 90 bp CAGCCCTGCCCACAGCACAGGCTCACAGAAGCCGAGATCCACATCACCGCCTGGCTCTACTTTCCAGGATaGCAGTTGGCCCGAGGGGCT +
Preference number: 4 (lower is better)
Translates to: QPCPQHRLTEAEIHITAWLYFPG*QLARGA
Trigger: AGCCCCTCGGGCCAACTGCCATCCTGGAAAGTAGAG...CCAGGCGGTGATGTGGATCTCGGCTTCTGTGAGCCTGTGCTGTGGGCAGGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CCA 90 bp GGCTCTGGCAAGCGCCCAGAGACAACTGCGTCTCTGCCAGGACGCTCATCCTCACATGGGGTCGTCATCTaGCTCCCAGCCTTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: GSGKRPETTASLPGRSSSHGVVI*LPAFQL
Trigger: GAGCTGGAAGGCTGGGAGCCAGATGACGACCCCATG...TGAGGATGAGCGTCCTGGCAGAGACGCAGTTGTCTCTGGGCGCTTGCCAGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374948.6
3UTR CAA 72 bp TTCCACATGGCGACAGCCTGCAATGGGGGCTCCAGTTaGGCTTGCTGGTCTCTTCTGGGCAGCGGGCACTGC +
Preference number: 4 (lower is better)
Translates to: FHMATACNGGSS*ACWSLLGSGHC
Trigger: GCAGTGCCCGCTGCCCAGAAGAGACCAGCAAGCCAAACTGGAGCCCCCATTGCAGGCTGTCGCCATGTGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR TCA 90 bp TCCAGGATGGCAGTTGGCCCGAGGGGCTCTAACCTGCCATTGGAACCTCACCCAAGATGCGGTGGTCCTTaGGAAAGGGCTGCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: SRMAVGPRGSNLPLEPHPRCGGP*ERAARQ
Trigger: CTGCCTGGCAGCCCTTTCTCAAGGACCACCGCATCT...TGGGTGAGGTTCCAATGGCAGGTTAGAGCCCCTCGGGCCAACTGCCATCCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR TCA 90 bp CGGATGATACAAACAGGTCTGGGGTTCGTGGCTCTGGCAAGCGCCCAGAGACAACAGTGGGGCAGTGGATaGAGCCAGCCTCGGCCATCC +
Preference number: 4 (lower is better)
Translates to: RMIQTGLGFVALASAQRQQWGSG*SQPRPS
Trigger: GGATGGCCGAGGCTGGCTTCATCCACTGCCCCACTG...TTGTCTCTGGGCGCTTGCCAGAGCCACGAACCCCAGACCTGTTTGTATCATCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR TCA 90 bp CGCCCAGAGACAACTGCGTCTCTGCCAGGACGCTCATCCTCACTGCGGCTGTCTCAGGAACAGCCGAGATaGCCTCCAGAGGTTTCCAGC +
Preference number: 4 (lower is better)
Translates to: RPETTASLPGRSSSLRLSQEQPR*PPEVSS
Trigger: GCTGGAAACCTCTGGAGGTCATCTCGGCTGTTCCTG...AGACAGCCGCAGTGAGGATGAGCGTCCTGGCAGAGACGCAGTTGTCTCTGGGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR GCA 90 bp TGCAGCTCAGATTCAACAGGCACCTGCCAAGTCCACACTCAGGACTGTGACAGCCCATCCGCTCCGGGGTaGAGGCGCAGCCCTCCAAGA +
Preference number: 4 (lower is better)
Translates to: CSSDSTGTCQVHTQDCDSPSAPG*RRSPPR
Trigger: TCTTGGAGGGCTGCGCCTGCACCCCGGAGCGGATGG...GCTGTCACAGTCCTGAGTGTGGACTTGGCAGGTGCCTGTTGAATCTGAGCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR GCA 90 bp AGCCCTGCCCACAGCACAGGCTCACAGAAGCCGAGATCCACATCACCGCCTGGCCACTGTGGAAGGCTCTaGCCACGCGAACAAAGCTGT +
Preference number: 4 (lower is better)
Translates to: SPAHSTGSQKPRSTSPPGHCGRL*PREQSC
Trigger: ACAGCTTTGTTCGCGTGGGCAGAGCCTTCCACAGTG...GCCAGGCGGTGATGTGGATCTCGGCTTCTGTGAGCCTGTGCTGTGGGCAGGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR GCA 90 bp AGGGAGGAGGGCGAATCAAATCCATCATCTTACGCCAGACTTCAGCCCTGCGGGGACAGACACACGGCCTaGAGCAGCCCAGCCAGTCCC +
Preference number: 4 (lower is better)
Translates to: REEGESNPSSYARLQPCGDRHTA*SSPASP
Trigger: GGGACTGGCTGGGCTGCTGCAGGCCGTGTGTCTGTC...CCCGCAGGGCTGAAGTCTGGCGTAAGATGATGGATTTGATTCGCCCTCCTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR GCA 90 bp GGCTCTGGCAAGCGCCCAGAGACAACTGCGTCTCTGCCAGGACGCTCATCCTCACTGGGCAGCGGGCACTaGTGTCTCTACTTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: GSGKRPETTASLPGRSSSLGSGH*CLYFPG
Trigger: TCCTGGAAAGTAGAGACAGCAGTGCCCGCTGCCCAG...TGAGGATGAGCGTCCTGGCAGAGACGCAGTTGTCTCTGGGCGCTTGCCAGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CCA 90 bp TGGCAAGCGCCCAGAGACAACTGCGTCTCTGCCAGGACGCTCATCCTCACTGCGACACTGGGCCAAGTCTaGCTCGTTCTCAGTGGGGCA +
Preference number: 4 (lower is better)
Translates to: WQAPRDNCVSARTLILTATLGQV*LVLSGA
Trigger: TGCCCCACTGAGAACGAGCCAGACTTGGCCCAGTGT...CGCAGTGAGGATGAGCGTCCTGGCAGAGACGCAGTTGTCTCTGGGCGCTTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CCA 90 bp TTCAGCCCTGCGGGAGCTGCTGCCTCCAAAGAAAGCGGGGACCTGGGCGGACTGAATAAACCCTGGAAGTaGTGCAGCCACTCTGGGACC +
Preference number: 4 (lower is better)
Translates to: FSPAGAAASKESGDLGGLNKPWK*CSHSGT
Trigger: GGTCCCAGAGTGGCTGCACCACTTCCAGGGTTTATT...CAGTCCGCCCAGGTCCCCGCTTTCTTTGGAGGCAGCAGCTCCCGCAGGGCTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CCA 90 bp AAGCGCCCAGAGACAACTGCGTCTCTGCCAGGACGCTCATCCTCACTGCGGCTGCTCTACTTTCCAGGATaGCAGTTGGCCCGAGGGGCT +
Preference number: 4 (lower is better)
Translates to: KRPETTASLPGRSSSLRLLYFPG*QLARGA
Trigger: AGCCCCTCGGGCCAACTGCCATCCTGGAAAGTAGAG...CAGCCGCAGTGAGGATGAGCGTCCTGGCAGAGACGCAGTTGTCTCTGGGCGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR TCA 90 bp AAACAGGTCTGGGGTTCGTGGCTCTGGCAAGCGCCCAGAGACAACTGCGTCTCTGCCACTGCCTTTTTCTaGGGGAGGAGCGGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: KQVWGSWLWQAPRDNCVSATAFF*GRSGQH
Trigger: ATGCTGGCCGCTCCTCCCTCAGAAAAAGGCAGTGGC...AGAGACGCAGTTGTCTCTGGGCGCTTGCCAGAGCCACGAACCCCAGACCTGTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR TCA 90 bp CCACTGTTACCAGCAGCACCCGCTGCACAGGCAGAAGCACCTCTGGTGCCACTTCGGAAGGAGCCCGGATaGTACAAACAGGTCTGGGGT +
Preference number: 4 (lower is better)
Translates to: PLLPAAPAAQAEAPLVPLRKEPG*YKQVWG
Trigger: ACCCCAGACCTGTTTGTATCATCCGGGCTCCTTCCG...AAGTGGCACCAGAGGTGCTTCTGCCTGTGCAGCGGGTGCTGCTGGTAACAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR GCA 90 bp GTTTGGCTTGCTGGTCTCTTCTGGGCAGCGGGCACTGCTGTCTCTACTTTCCAGCCCTGCGGGAGCTGCTaGCTCCAAAGAAAGCGGGGA +
Preference number: 4 (lower is better)
Translates to: VWLAGLFWAAGTAVSTFQPCGSC*LQRKRG
Trigger: TCCCCGCTTTCTTTGGAGGCAGCAGCTCCCGCAGGG...CTGGAAAGTAGAGACAGCAGTGCCCGCTGCCCAGAAGAGACCAGCAAGCCAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR GCA 90 bp CGGATGATACAAACAGGTCTGGGGTTCGTGGCTCTGGCAAGCGCCCAGAGACAACCCTGCGGGAGCTGCTaGCTCCAAAGAAAGCGGGGA +
Preference number: 4 (lower is better)
Translates to: RMIQTGLGFVALASAQRQPCGSC*LQRKRG
Trigger: TCCCCGCTTTCTTTGGAGGCAGCAGCTCCCGCAGGG...TTGTCTCTGGGCGCTTGCCAGAGCCACGAACCCCAGACCTGTTTGTATCATCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR GCA 90 bp CGCCCAGAGACAACTGCGTCTCTGCCAGGACGCTCATCCTCACTGCGGCTGTCTAGACAACTGCGTCTCTaGCAGGACGCTCATCCTCAC +
Preference number: 4 (lower is better)
Translates to: RPETTASLPGRSSSLRLSRQLRL*QDAHPH
Trigger: GTGAGGATGAGCGTCCTGGCAGAGACGCAGTTGTCT...AGACAGCCGCAGTGAGGATGAGCGTCCTGGCAGAGACGCAGTTGTCTCTGGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR GCA 90 bp GGAGCTGCTGCCTCCAAAGAAAGCGGGGACCTGGGCGGACTGCGTCTCTCCCCCATTGTTGGTTTCCTTTaGATGGGGTCGTCATCTGGC +
Preference number: 4 (lower is better)
Translates to: GAAASKESGDLGGLRLSPIVGFL*MGSSSG
Trigger: GCCAGATGACGACCCCATGCAAAGGAAACCAACAAT...GGGGGAGAGACGCAGTCCGCCCAGGTCCCCGCTTTCTTTGGAGGCAGCAGCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374948.6
CDS-3UTR CCA 90 bp AAACAGGTCTGGGGTTCGTGGCTCTGGCAAGCGCCCAGAGACAACTGCGTCTCTCCCGCGATTCAAATCTaGCGGTTAATGGCGCGCCGC +
Preference number: 4 (lower is better)
Translates to: KQVWGSWLWQAPRDNCVSPAIQI*RLMARR
Trigger: GCGGCGCGCCATTAACCGCCAGATTTGAATCGCGGG...AGAGACGCAGTTGTCTCTGGGCGCTTGCCAGAGCCACGAACCCCAGACCTGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301633.8
ENST00000350051.8
CDS-3UTR CCA 90 bp AGCCCTGCCCACAGCACAGGCTCACAGAAGCCGAGATCCACATCACCGCCTGGCCCAGGGAATAAACCCTaGAAGTGGTGCAGCCACTCT +
Preference number: 4 (lower is better)
Translates to: SPAHSTGSQKPRSTSPPGPGNKP*KWCSHS
Trigger: AGAGTGGCTGCACCACTTCCAGGGTTTATTCCCTGG...GCCAGGCGGTGATGTGGATCTCGGCTTCTGTGAGCCTGTGCTGTGGGCAGGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CCA 90 bp AAACAGGTCTGGGGTTCGTGGCTCTGGCAAGCGCCCAGAGACAACTGCGTCTCTCTCACTGCGGCTGTCTaGGCAGATGGCTGTTGGCAG +
Preference number: 4 (lower is better)
Translates to: KQVWGSWLWQAPRDNCVSLTAAV*ADGCWQ
Trigger: CTGCCAACAGCCATCTGCCCAGACAGCCGCAGTGAG...AGAGACGCAGTTGTCTCTGGGCGCTTGCCAGAGCCACGAACCCCAGACCTGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
3UTR CAA 72 bp AGCGGGCACTGCTGTCTCTACTTTCCAGGATGGCAGTaGGCCCGAGGGGCTCTAACCTGCCATTGGAACCTC +
Preference number: 4 (lower is better)
Translates to: SGHCCLYFPGWQ*ARGALTCHWNL
Trigger: GAGGTTCCAATGGCAGGTTAGAGCCCCTCGGGCCAACTGCCATCCTGGAAAGTAGAGACAGCAGTGCCCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR GCA 90 bp CCAGAGCCTTCCTCTTCATGTCCAGTTAAACAGACCCTGGCAAACATCAGGCTCCCATCCGCTCCGGGGTaGAGGCGCAGCCCTCCAAGA +
Preference number: 4 (lower is better)
Translates to: PEPSSSCPVKQTLANIRLPSAPG*RRSPPR
Trigger: TCTTGGAGGGCTGCGCCTGCACCCCGGAGCGGATGG...GAGCCTGATGTTTGCCAGGGTCTGTTTAACTGGACATGAAGAGGAAGGCTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000586192.5
ENST00000587746.5
ENST00000590925.6
ENST00000591800.1
ENST00000592734.5
CDS-3UTR GCA 90 bp GTTTGGCTTGCTGGTCTCTTCTGGGCAGCGGGCACTGCTGTCTCTACTTTCCAGACCAGCAGCACCCGCTaGACAGGCAGAAGCACCTCT +
Preference number: 4 (lower is better)
Translates to: VWLAGLFWAAGTAVSTFQTSSTR*TGRSTS
Trigger: AGAGGTGCTTCTGCCTGTGCAGCGGGTGCTGCTGGT...CTGGAAAGTAGAGACAGCAGTGCCCGCTGCCCAGAAGAGACCAGCAAGCCAAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR GCA 90 bp TGGCAAGCGCCCAGAGACAACTGCGTCTCTGCCAGGACGCTCATCCTCACTGCGGATTCAACAGGCACCTaGCAAGTCCACACTCAGGAC +
Preference number: 4 (lower is better)
Translates to: WQAPRDNCVSARTLILTADSTGT*QVHTQD
Trigger: GTCCTGAGTGTGGACTTGGCAGGTGCCTGTTGAATC...CGCAGTGAGGATGAGCGTCCTGGCAGAGACGCAGTTGTCTCTGGGCGCTTGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR GCA 90 bp CAGCCCTGCCCACAGCACAGGCTCACAGAAGCCGAGATCCACATCACCGCCTGGTGTAACAATCCACCCTaGAGCTCTATGACAGGGAGG +
Preference number: 4 (lower is better)
Translates to: QPCPQHRLTEAEIHITAWCNNPP*SSMTGR
Trigger: CCTCCCTGTCATAGAGCTGCAGGGTGGATTGTTACA...CCAGGCGGTGATGTGGATCTCGGCTTCTGTGAGCCTGTGCTGTGGGCAGGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR GCA 90 bp CCATCATCTTACGCCAGACTTCAGCCCTGCGGGAGCTGCTGCCTCCAAAGAAAGGACGCTCATCCTCACTaGGGCTGTCTGGGCAGATGG +
Preference number: 4 (lower is better)
Translates to: PSSYARLQPCGSCCLQRKDAHPH*GCLGRW
Trigger: CCATCTGCCCAGACAGCCGCAGTGAGGATGAGCGTC...CTTTCTTTGGAGGCAGCAGCTCCCGCAGGGCTGAAGTCTGGCGTAAGATGATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR GCA 90 bp GGCAAGCGCCCAGAGACAACTGCGTCTCTGCCAGGACGCTCATCCTCACTGCGGATTTTCAGTTGTTTCTaGCCGGAAGGAGCCCGGATG +
Preference number: 4 (lower is better)
Translates to: GKRPETTASLPGRSSSLRIFSCF*PEGARM
Trigger: CATCCGGGCTCCTTCCGGGCAGAAACAACTGAAAAT...CCGCAGTGAGGATGAGCGTCCTGGCAGAGACGCAGTTGTCTCTGGGCGCTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR GCA 90 bp GGCTCCAGTTTGGCTTGCTGGTCTCTTCTGGGCAGCGGGCACTGCTGTCTCTACCGAGGGGCTCTAACCTaGCATTGGAACCTCACCCAT +
Preference number: 4 (lower is better)
Translates to: GSSLACWSLLGSGHCCLYRGALT*HWNLTH
Trigger: ATGGGTGAGGTTCCAATGGCAGGTTAGAGCCCCTCG...GTAGAGACAGCAGTGCCCGCTGCCCAGAAGAGACCAGCAAGCCAAACTGGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CCA 90 bp GTTTGGCTTGCTGGTCTCTTCTGGGCAGCGGGCACTGCTGTCTCTACTTTCCAGCCCGCGATTCAAATCTaGCGGTTAATGGCGCGCCGC +
Preference number: 4 (lower is better)
Translates to: VWLAGLFWAAGTAVSTFQPAIQI*RLMARR
Trigger: GCGGCGCGCCATTAACCGCCAGATTTGAATCGCGGG...CTGGAAAGTAGAGACAGCAGTGCCCGCTGCCCAGAAGAGACCAGCAAGCCAAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301633.8
ENST00000350051.8
CDS-3UTR CCA 90 bp CCAGAGCCTTCCTCTTCATGTCCAGTTAAACAGACCCTGGCAAACATCAGGCTCCCGTGCCCGGCCCAATaGGGTCGTCATCTGGCTCCC +
Preference number: 4 (lower is better)
Translates to: PEPSSSCPVKQTLANIRLPCPAQ*GRHLAP
Trigger: GGGAGCCAGATGACGACCCCATTGGGCCGGGCACGG...GAGCCTGATGTTTGCCAGGGTCTGTTTAACTGGACATGAAGAGGAAGGCTCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586192.5
ENST00000587746.5
CDS-3UTR CCA 90 bp CTGCGGCTGTCTGGGCAGATGGCTGTTGGCAGGCTAGGGACGACGATGAAAAACAGAGGCCTCAATCCATaGCAGCCAGCTGCTCGATGG +
Preference number: 4 (lower is better)
Translates to: LRLSGQMAVGRLGTTMKNRGLNP*QPAARW
Trigger: CCATCGAGCAGCTGGCTGCCATGGATTGAGGCCTCT...GTTTTTCATCGTCGTCCCTAGCCTGCCAACAGCCATCTGCCCAGACAGCCGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CCA 90 bp CTGCGGCTGTCTGGGCAGATGGCTGTTGGCAGGCTAGGGACGACGATGAAAAACTGGGCAGATGGCTGTTaGCAGGCTAGGGACGACGAT +
Preference number: 4 (lower is better)
Translates to: LRLSGQMAVGRLGTTMKNWADGC*QARDDD
Trigger: ATCGTCGTCCCTAGCCTGCCAACAGCCATCTGCCCA...GTTTTTCATCGTCGTCCCTAGCCTGCCAACAGCCATCTGCCCAGACAGCCGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CCA 90 bp GTTTGGCTTGCTGGTCTCTTCTGGGCAGCGGGCACTGCTGTCTCTACTTTCCAGCTCACTGCGGCTGTCTaGGCAGATGGCTGTTGGCAG +
Preference number: 4 (lower is better)
Translates to: VWLAGLFWAAGTAVSTFQLTAAV*ADGCWQ
Trigger: CTGCCAACAGCCATCTGCCCAGACAGCCGCAGTGAG...CTGGAAAGTAGAGACAGCAGTGCCCGCTGCCCAGAAGAGACCAGCAAGCCAAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CCA 90 bp TGCAGCTCAGATTCAACAGGCACCTGCCAAGTCCACACTCAGGACTGTGACAGCCAGGTCTGGGGTTCGTaGCTCTGGCAAGCGCCCAGA +
Preference number: 4 (lower is better)
Translates to: CSSDSTGTCQVHTQDCDSQVWGS*LWQAPR
Trigger: TCTGGGCGCTTGCCAGAGCCACGAACCCCAGACCTG...GCTGTCACAGTCCTGAGTGTGGACTTGGCAGGTGCCTGTTGAATCTGAGCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR TCA 90 bp GGTTTCCTTTGCCTTTCTCCTGAAACTCCTGGAGGAAAGTCCAGAGCCTTCCTCCAGTGGGGCAGTGGATaGAGCCAGCCTCGGCCATCC +
Preference number: 4 (lower is better)
Translates to: GFLCLSPETPGGKSRAFLQWGSG*SQPRPS
Trigger: GGATGGCCGAGGCTGGCTTCATCCACTGCCCCACTG...GAGGAAGGCTCTGGACTTTCCTCCAGGAGTTTCAGGAGAAAGGCAAAGGAAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590925.6
CDS-3UTR TCA 90 bp AGGCTGGTGGCACCAGGGAATAAACCCTGGAAGTGGTGCAGCCACTCTGGGACCAGCCTTCCAGCTCCTTaGAGCAGAAGAAACACTGGG +
Preference number: 4 (lower is better)
Translates to: RLVAPGNKPWKWCSHSGTSLPAP*SRRNTG
Trigger: CCCAGTGTTTCTTCTGCTTCAAGGAGCTGGAAGGCT...GGTCCCAGAGTGGCTGCACCACTTCCAGGGTTTATTCCCTGGTGCCACCAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301633.8
ENST00000350051.8
CDS-3UTR TCA 90 bp AAGCGCCCAGAGACAACTGCGTCTCTGCCAGGACGCTCATCCTCACTGCGGCTGACCCCGTTTCCCCAATaGCTTAGAATGGCTTTGTGC +
Preference number: 4 (lower is better)
Translates to: KRPETTASLPGRSSSLRLTPFPQ*LRMALC
Trigger: GCACAAAGCCATTCTAAGTCATTGGGGAAACGGGGT...CAGCCGCAGTGAGGATGAGCGTCCTGGCAGAGACGCAGTTGTCTCTGGGCGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR TCA 90 bp GCAGCTCAGATTCAACAGGCACCTGCCAAGTCCACACTCAGGACTGTGACAGCCGTCTCCTCATCCACCTaGAGTTCACCCCGTTTCCCC +
Preference number: 4 (lower is better)
Translates to: AAQIQQAPAKSTLRTVTAVSSST*SSPRFP
Trigger: GGGGAAACGGGGTGAACTTCAGGTGGATGAGGAGAC...GGCTGTCACAGTCCTGAGTGTGGACTTGGCAGGTGCCTGTTGAATCTGAGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR TCA 90 bp TGGCTTGCTGGTCTCTTCTGGGCAGCGGGCACTGCTGTCTCTACTTTCCAGGATCAGGAACAGCCGAGATaGCCTCCAGAGGTTTCCAGC +
Preference number: 4 (lower is better)
Translates to: WLAGLFWAAGTAVSTFQDQEQPR*PPEVSS
Trigger: GCTGGAAACCTCTGGAGGTCATCTCGGCTGTTCCTG...ATCCTGGAAAGTAGAGACAGCAGTGCCCGCTGCCCAGAAGAGACCAGCAAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR GCA 90 bp TCCTCTTCATGTCCAGTTAAACAGACCCTGGCAAACATCAGGCTCTTCCTCGAACGCCGCCGCCACCTCTaGCAACGGGTCCCGCGATTC +
Preference number: 4 (lower is better)
Translates to: SSSCPVKQTLANIRLFLERRRHL*QRVPRF
Trigger: GAATCGCGGGACCCGTTGGCAGAGGTGGCGGCGGCG...TTCGAGGAAGAGCCTGATGTTTGCCAGGGTCTGTTTAACTGGACATGAAGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590925.6
CDS-3UTR GCA 90 bp AAGTCATTTAAAAAGGATTTAGGCCACTGCCTTTTTCTGAGGGAGGAGCGGCCAGGAGCGGCCAGCATGTaGCCCGCGGCTCACTGGGCC +
Preference number: 4 (lower is better)
Translates to: KSFKKDLGHCLFLREERPGAASM*PAAHWA
Trigger: GGCCCAGTGAGCCGCGGGGCACATGCTGGCCGCTCC...TGGCCGCTCCTCCCTCAGAAAAAGGCAGTGGCCTAAATCCTTTTTAAATGACTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CCA 90 bp CCAGGATGGCAGTTGGCCCGAGGGGCTCTAACCTGCCATTGGAACCTCACCCATAATAAACCCTGGAAGTaGTGCAGCCACTCTGGGACC +
Preference number: 4 (lower is better)
Translates to: PGWQLARGALTCHWNLTHNKPWK*CSHSGT
Trigger: GGTCCCAGAGTGGCTGCACCACTTCCAGGGTTTATT...ATGGGTGAGGTTCCAATGGCAGGTTAGAGCCCCTCGGGCCAACTGCCATCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CCA 90 bp TCCAGGATGGCAGTTGGCCCGAGGGGCTCTAACCTGCCATTGGAACCTCACCCACCAGGGAATAAACCCTaGAAGTGGTGCAGCCACTCT +
Preference number: 4 (lower is better)
Translates to: SRMAVGPRGSNLPLEPHPPGNKP*KWCSHS
Trigger: AGAGTGGCTGCACCACTTCCAGGGTTTATTCCCTGG...TGGGTGAGGTTCCAATGGCAGGTTAGAGCCCCTCGGGCCAACTGCCATCCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CCA 90 bp CATGAGGTCCAGACACATTCACTGTGGAAGGCTCTGCCCACGCGAACAAAGCTGTGCCCCGCGGCTCACTaGGCCTGTCTAATCACACAG +
Preference number: 4 (lower is better)
Translates to: HEVQTHSLWKALPTRTKLCPAAH*ACLITQ
Trigger: CTGTGTGATTAGACAGGCCCAGTGAGCCGCGGGGCA...CAGCTTTGTTCGCGTGGGCAGAGCCTTCCACAGTGAATGTGTCTGGACCTCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CCA 90 bp CATGAGGTCCAGACACATTCACTGTGGAAGGCTCTGCCCACGCGAACAAAGCTGTGGGGTTCGTGGCTCTaGCAAGCGCCCAGAGACAAC +
Preference number: 4 (lower is better)
Translates to: HEVQTHSLWKALPTRTKLWGSWL*QAPRDN
Trigger: GTTGTCTCTGGGCGCTTGCCAGAGCCACGAACCCCA...CAGCTTTGTTCGCGTGGGCAGAGCCTTCCACAGTGAATGTGTCTGGACCTCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CCA 90 bp TGCAGCTCAGATTCAACAGGCACCTGCCAAGTCCACACTCAGGACTGTGACAGCTGGGGTTCGTGGCTCTaGCAAGCGCCCAGAGACAAC +
Preference number: 4 (lower is better)
Translates to: CSSDSTGTCQVHTQDCDSWGSWL*QAPRDN
Trigger: GTTGTCTCTGGGCGCTTGCCAGAGCCACGAACCCCA...GCTGTCACAGTCCTGAGTGTGGACTTGGCAGGTGCCTGTTGAATCTGAGCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CCA 90 bp AGGGAGGAGGGCGAATCAAATCCATCATCTTACGCCAGACTTCAGCCCTGCGGGTCCAGTTTGGCTTGCTaGTCTCTTCTGGGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: REEGESNPSSYARLQPCGSSLAC*SLLGSG
Trigger: CCCGCTGCCCAGAAGAGACCAGCAAGCCAAACTGGA...CCCGCAGGGCTGAAGTCTGGCGTAAGATGATGGATTTGATTCGCCCTCCTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CCA 90 bp TGGCTTGCTGGTCTCTTCTGGGCAGCGGGCACTGCTGTCTCTACTTTCCAGGATTCCAGTTTGGCTTGCTaGTCTCTTCTGGGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: WLAGLFWAAGTAVSTFQDSSLAC*SLLGSG
Trigger: CCCGCTGCCCAGAAGAGACCAGCAAGCCAAACTGGA...ATCCTGGAAAGTAGAGACAGCAGTGCCCGCTGCCCAGAAGAGACCAGCAAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR TCA 90 bp AGCCTTCCTCTTCATGTCCAGTTAAACAGACCCTGGCAAACATCAGGCTCTTCCCAGTGGGGCAGTGGATaGAGCCAGCCTCGGCCATCC +
Preference number: 4 (lower is better)
Translates to: SLPLHVQLNRPWQTSGSSQWGSG*SQPRPS
Trigger: GGATGGCCGAGGCTGGCTTCATCCACTGCCCCACTG...GGAAGAGCCTGATGTTTGCCAGGGTCTGTTTAACTGGACATGAAGAGGAAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000586192.5
ENST00000587746.5
ENST00000590925.6
ENST00000591800.1
ENST00000592734.5
CDS-3UTR TCA 90 bp CTTCCTCTTCATGTCCAGTTAAACAGACCCTGGCAAACATCAGGCTCTTCCTCGCAGTGGGGCAGTGGATaGAGCCAGCCTCGGCCATCC +
Preference number: 4 (lower is better)
Translates to: LPLHVQLNRPWQTSGSSSQWGSG*SQPRPS
Trigger: GGATGGCCGAGGCTGGCTTCATCCACTGCCCCACTG...CGAGGAAGAGCCTGATGTTTGCCAGGGTCTGTTTAACTGGACATGAAGAGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000586192.5
ENST00000587746.5
ENST00000590925.6
ENST00000591800.1
ENST00000592734.5
CDS-3UTR TCA 90 bp CTGCGGCTGTCTGGGCAGATGGCTGTTGGCAGGCTAGGGACGACGATGAAAAACAGCCTTCCAGCTCCTTaGAGCAGAAGAAACACTGGG +
Preference number: 4 (lower is better)
Translates to: LRLSGQMAVGRLGTTMKNSLPAP*SRRNTG
Trigger: CCCAGTGTTTCTTCTGCTTCAAGGAGCTGGAAGGCT...GTTTTTCATCGTCGTCCCTAGCCTGCCAACAGCCATCTGCCCAGACAGCCGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR TCA 90 bp CGGATGATACAAACAGGTCTGGGGTTCGTGGCTCTGGCAAGCGCCCAGAGACAAGAGGAGGCACAGGTGTaGCAGATAAGGAACCTGCAG +
Preference number: 4 (lower is better)
Translates to: RMIQTGLGFVALASAQRQEEAQV*QIRNLQ
Trigger: CTGCAGGTTCCTTATCTGTCACACCTGTGCCTCCTC...TTGTCTCTGGGCGCTTGCCAGAGCCACGAACCCCAGACCTGTTTGTATCATCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR TCA 90 bp AGGCTCACAGAAGCCGAGATCCACATCACCGCCTGGCATGCAAAGGAGTTGAAGGTCTCCTCATCCACCTaGAGTTCACCCCGTTTCCCC +
Preference number: 4 (lower is better)
Translates to: RLTEAEIHITAWHAKELKVSSST*SSPRFP
Trigger: GGGGAAACGGGGTGAACTTCAGGTGGATGAGGAGAC...CTTCAACTCCTTTGCATGCCAGGCGGTGATGTGGATCTCGGCTTCTGTGAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR TCA 90 bp ACAGCCGAGATGACCTCCAGAGGTTTCCAGCGAAGCTGTAACAATCCACCCTGCCAGGAACAGCCGAGATaGCCTCCAGAGGTTTCCAGC +
Preference number: 4 (lower is better)
Translates to: TAEMTSRGFQRSCNNPPCQEQPR*PPEVSS
Trigger: GCTGGAAACCTCTGGAGGTCATCTCGGCTGTTCCTG...GCAGGGTGGATTGTTACAGCTTCGCTGGAAACCTCTGGAGGTCATCTCGGCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR TCA 90 bp TGGCAAGCGCCCAGAGACAACTGCGTCTCTGCCAGGACGCTCATCCTCACTGCGAATAAGCAGCTTAGATaGGTACAGAGGCTGGAGTGC +
Preference number: 4 (lower is better)
Translates to: WQAPRDNCVSARTLILTANKQLR*VQRLEC
Trigger: GCACTCCAGCCTCTGTACTCATCTAAGCTGCTTATT...CGCAGTGAGGATGAGCGTCCTGGCAGAGACGCAGTTGTCTCTGGGCGCTTGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR GCA 90 bp GTTTGGCTTGCTGGTCTCTTCTGGGCAGCGGGCACTGCTGTCTCTACTTTCCAGCACTGTGGAAGGCTCTaGCCACGCGAACAAAGCTGT +
Preference number: 4 (lower is better)
Translates to: VWLAGLFWAAGTAVSTFQHCGRL*PREQSC
Trigger: ACAGCTTTGTTCGCGTGGGCAGAGCCTTCCACAGTG...CTGGAAAGTAGAGACAGCAGTGCCCGCTGCCCAGAAGAGACCAGCAAGCCAAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR GCA 90 bp ATTTTCAGTTGTTTCTGCCCGGAAGGAGCCCGGATGATACAAACAGGTCTGGGGCAGCCCTGCGGGAGCTaGTGCCTCCAAAGAAAGCGG +
Preference number: 4 (lower is better)
Translates to: IFSCFCPEGARMIQTGLGQPCGS*CLQRKR
Trigger: CCGCTTTCTTTGGAGGCAGCAGCTCCCGCAGGGCTG...CCCCAGACCTGTTTGTATCATCCGGGCTCCTTCCGGGCAGAAACAACTGAAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR GCA 90 bp TGGCTTGCTGGTCTCTTCTGGGCAGCGGGCACTGCTGTCTCTACTTTCCAGGATCGAGGGGCTCTAACCTaGCATTGGAACCTCACCCAT +
Preference number: 4 (lower is better)
Translates to: WLAGLFWAAGTAVSTFQDRGALT*HWNLTH
Trigger: ATGGGTGAGGTTCCAATGGCAGGTTAGAGCCCCTCG...ATCCTGGAAAGTAGAGACAGCAGTGCCCGCTGCCCAGAAGAGACCAGCAAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR GCA 90 bp TCCATCATCTTACGCCAGACTTCAGCCCTGCGGGAGCTGCTGCCTCCAAAGAAACTGGGCAGCGGGCACTaGTGTCTCTACTTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: SIILRQTSALRELLPPKKLGSGH*CLYFPG
Trigger: TCCTGGAAAGTAGAGACAGCAGTGCCCGCTGCCCAG...TTTCTTTGGAGGCAGCAGCTCCCGCAGGGCTGAAGTCTGGCGTAAGATGATGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR GCA 90 bp TCCATCATCTTACGCCAGACTTCAGCCCTGCGGGAGCTGCTGCCTCCAAAGAAAGGCTCCAGTTTGGCTTaGTGGTCTCTTCTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: SIILRQTSALRELLPPKKGSSLA*WSLLGS
Trigger: GCTGCCCAGAAGAGACCAGCAAGCCAAACTGGAGCC...TTTCTTTGGAGGCAGCAGCTCCCGCAGGGCTGAAGTCTGGCGTAAGATGATGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CCA 90 bp GGCTCCAGTTTGGCTTGCTGGTCTCTTCTGGGCAGCGGGCACTGCTGTCTCTACAAGCAGAAGAAACACTaGGCCAAGTCTGGCTCGTTC +
Preference number: 4 (lower is better)
Translates to: GSSLACWSLLGSGHCCLYKQKKH*AKSGSF
Trigger: GAACGAGCCAGACTTGGCCCAGTGTTTCTTCTGCTT...GTAGAGACAGCAGTGCCCGCTGCCCAGAAGAGACCAGCAAGCCAAACTGGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CCA 90 bp GCACTTAGACAAGGGCCTACGGCTTTATTAACAGATGTCGAGGAAGCTTTCAGGGTGGTGCAGCCACTCTaGGACCAGGCAGCTCCGGCC +
Preference number: 4 (lower is better)
Translates to: ALRQGPTALLTDVEEAFRVVQPL*DQAAPA
Trigger: GGCCGGAGCTGCCTGGTCCCAGAGTGGCTGCACCAC...CCTGAAAGCTTCCTCGACATCTGTTAATAAAGCCGTAGGCCCTTGTCTAAGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CCA 90 bp TTCAGTTGTTTCTGCCCGGAAGGAGCCCGGATGATACAAACAGGTCTGGGGTTCTGCCCCGCGGCTCACTaGGCCTGTCTAATCACACAG +
Preference number: 4 (lower is better)
Translates to: FSCFCPEGARMIQTGLGFCPAAH*ACLITQ
Trigger: CTGTGTGATTAGACAGGCCCAGTGAGCCGCGGGGCA...GAACCCCAGACCTGTTTGTATCATCCGGGCTCCTTCCGGGCAGAAACAACTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CCA 90 bp ACTGCGGCTGTCTGGGCAGATGGCTGTTGGCAGGCTAGGGACGACGATGAAAAAGACAGATGTGAAGGTTaGGCTGACAGACACACGGCC +
Preference number: 4 (lower is better)
Translates to: TAAVWADGCWQARDDDEKDRCEG*ADRHTA
Trigger: GGCCGTGTGTCTGTCAGCCCAACCTTCACATCTGTC...TTTTTCATCGTCGTCCCTAGCCTGCCAACAGCCATCTGCCCAGACAGCCGCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CCA 90 bp ATTTTCAGTTGTTTCTGCCCGGAAGGAGCCCGGATGATACAAACAGGTCTGGGGAAGAAAGCGGGGACCTaGGCGGACTGCGTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: IFSCFCPEGARMIQTGLGKKAGT*ADCVSP
Trigger: GGGAGAGACGCAGTCCGCCCAGGTCCCCGCTTTCTT...CCCCAGACCTGTTTGTATCATCCGGGCTCCTTCCGGGCAGAAACAACTGAAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CCA 90 bp GGCACAGGTGTGACAGATAAGGAACCTGCAGCTCAGATTCAACAGGCACCTGCCTGGGCAGATGGCTGTTaGCAGGCTAGGGACGACGAT +
Preference number: 4 (lower is better)
Translates to: GTGVTDKEPAAQIQQAPAWADGC*QARDDD
Trigger: ATCGTCGTCCCTAGCCTGCCAACAGCCATCTGCCCA...GGCAGGTGCCTGTTGAATCTGAGCTGCAGGTTCCTTATCTGTCACACCTGTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CCA 90 bp TCCAGGATGGCAGTTGGCCCGAGGGGCTCTAACCTGCCATTGGAACCTCACCCAATCCACATCACCGCCTaGCATGCAAAGGAGTTGAAG +
Preference number: 4 (lower is better)
Translates to: SRMAVGPRGSNLPLEPHPIHITA*HAKELK
Trigger: CTTCAACTCCTTTGCATGCCAGGCGGTGATGTGGAT...TGGGTGAGGTTCCAATGGCAGGTTAGAGCCCCTCGGGCCAACTGCCATCCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR TCA 90 bp CTGCTGATGTATTCTGTTGAACATGAAAGGCATCAGGCATCTTACGTCCACCCCCAGTGGGGCAGTGGATaGAGCCAGCCTCGGCCATCC +
Preference number: 4 (lower is better)
Translates to: LLMYSVEHERHQASYVHPQWGSG*SQPRPS
Trigger: GGATGGCCGAGGCTGGCTTCATCCACTGCCCCACTG...GGGGTGGACGTAAGATGCCTGATGCCTTTCATGTTCAACAGAATACATCAGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590449.1
CDS-3UTR TCA 90 bp TCCATCATCTTACGCCAGACTTCAGCCCTGCGGGAGCTGCTGCCTCCAAAGAAAGAGGAGGCACAGGTGTaGCAGATAAGGAACCTGCAG +
Preference number: 4 (lower is better)
Translates to: SIILRQTSALRELLPPKKEEAQV*QIRNLQ
Trigger: CTGCAGGTTCCTTATCTGTCACACCTGTGCCTCCTC...TTTCTTTGGAGGCAGCAGCTCCCGCAGGGCTGAAGTCTGGCGTAAGATGATGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR GCA 90 bp TCATGTCCAGTTAAACAGACCCTGGCAAACATCAGGCTCTTCCTCGAACAGAAACCATCCGCTCCGGGGTaGAGGCGCAGCCCTCCAAGA +
Preference number: 4 (lower is better)
Translates to: SCPVKQTLANIRLFLEQKPSAPG*RRSPPR
Trigger: TCTTGGAGGGCTGCGCCTGCACCCCGGAGCGGATGG...TTTCTGTTCGAGGAAGAGCCTGATGTTTGCCAGGGTCTGTTTAACTGGACATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000586192.5
ENST00000587746.5
ENST00000590925.6
ENST00000591800.1
ENST00000592734.5
CDS-3UTR GCA 90 bp TGTCCAGTTAAACAGACCCTGGCAAACATCAGGCTCTTCCTCGAACAGAAATTCCCATCCGCTCCGGGGTaGAGGCGCAGCCCTCCAAGA +
Preference number: 4 (lower is better)
Translates to: CPVKQTLANIRLFLEQKFPSAPG*RRSPPR
Trigger: TCTTGGAGGGCTGCGCCTGCACCCCGGAGCGGATGG...GAATTTCTGTTCGAGGAAGAGCCTGATGTTTGCCAGGGTCTGTTTAACTGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000586192.5
ENST00000587746.5
ENST00000590925.6
ENST00000591800.1
ENST00000592734.5
CDS-3UTR GCA 90 bp ATGACAGGGAGGAGGGCGAATCAAATCCATCATCTTACGCCAGACTTCAGCCCTACCAGCAGCACCCGCTaGACAGGCAGAAGCACCTCT +
Preference number: 4 (lower is better)
Translates to: MTGRRANQIHHLTPDFSPTSSTR*TGRSTS
Trigger: AGAGGTGCTTCTGCCTGTGCAGCGGGTGCTGCTGGT...AGGGCTGAAGTCTGGCGTAAGATGATGGATTTGATTCGCCCTCCTCCCTGTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR GCA 90 bp ACTGCGGCTGTCTGGGCAGATGGCTGTTGGCAGGCTAGGGACGACGATGAAAAAGATTCAACAGGCACCTaGCAAGTCCACACTCAGGAC +
Preference number: 4 (lower is better)
Translates to: TAAVWADGCWQARDDDEKDSTGT*QVHTQD
Trigger: GTCCTGAGTGTGGACTTGGCAGGTGCCTGTTGAATC...TTTTTCATCGTCGTCCCTAGCCTGCCAACAGCCATCTGCCCAGACAGCCGCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR GCA 90 bp GCACTTAGACAAGGGCCTACGGCTTTATTAACAGATGTCGAGGAAGCTTTCAGGGACAGACACACGGCCTaGAGCAGCCCAGCCAGTCCC +
Preference number: 4 (lower is better)
Translates to: ALRQGPTALLTDVEEAFRDRHTA*SSPASP
Trigger: GGGACTGGCTGGGCTGCTGCAGGCCGTGTGTCTGTC...CCTGAAAGCTTCCTCGACATCTGTTAATAAAGCCGTAGGCCCTTGTCTAAGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR GCA 90 bp ATTTTCAGTTGTTTCTGCCCGGAAGGAGCCCGGATGATACAAACAGGTCTGGGGGACGCTCATCCTCACTaGGGCTGTCTGGGCAGATGG +
Preference number: 4 (lower is better)
Translates to: IFSCFCPEGARMIQTGLGDAHPH*GCLGRW
Trigger: CCATCTGCCCAGACAGCCGCAGTGAGGATGAGCGTC...CCCCAGACCTGTTTGTATCATCCGGGCTCCTTCCGGGCAGAAACAACTGAAAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR GCA 90 bp TCCACATGGCGACAGCCTGCAATGGGGGCTCCAGTTTGGCTTGCTGGTCTCTTCATTTTCAGTTGTTTCTaGCCGGAAGGAGCCCGGATG +
Preference number: 4 (lower is better)
Translates to: STWRQPAMGAPVWLAGLFIFSCF*PEGARM
Trigger: CATCCGGGCTCCTTCCGGGCAGAAACAACTGAAAAT...GAAGAGACCAGCAAGCCAAACTGGAGCCCCCATTGCAGGCTGTCGCCATGTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR GCA 90 bp TCCATCATCTTACGCCAGACTTCAGCCCTGCGGGAGCTGCTGCCTCCAAAGAAACGAGGGGCTCTAACCTaGCATTGGAACCTCACCCAT +
Preference number: 4 (lower is better)
Translates to: SIILRQTSALRELLPPKKRGALT*HWNLTH
Trigger: ATGGGTGAGGTTCCAATGGCAGGTTAGAGCCCCTCG...TTTCTTTGGAGGCAGCAGCTCCCGCAGGGCTGAAGTCTGGCGTAAGATGATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CCA 90 bp TGGCTTGCTGGTCTCTTCTGGGCAGCGGGCACTGCTGTCTCTACTTTCCAGGATCCAGGGAATAAACCCTaGAAGTGGTGCAGCCACTCT +
Preference number: 4 (lower is better)
Translates to: WLAGLFWAAGTAVSTFQDPGNKP*KWCSHS
Trigger: AGAGTGGCTGCACCACTTCCAGGGTTTATTCCCTGG...ATCCTGGAAAGTAGAGACAGCAGTGCCCGCTGCCCAGAAGAGACCAGCAAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CCA 90 bp TTCAGTTGTTTCTGCCCGGAAGGAGCCCGGATGATACAAACAGGTCTGGGGTTCGGCCCACAGGAAGGCTaGTGGCACCAGGGAATAAAC +
Preference number: 4 (lower is better)
Translates to: FSCFCPEGARMIQTGLGFGPQEG*WHQGIN
Trigger: GTTTATTCCCTGGTGCCACCAGCCTTCCTGTGGGCC...GAACCCCAGACCTGTTTGTATCATCCGGGCTCCTTCCGGGCAGAAACAACTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CCA 90 bp TCCAGGATGGCAGTTGGCCCGAGGGGCTCTAACCTGCCATTGGAACCTCACCCAAGGCAGAAGCACCTCTaGTGCCACTTTCAAGACAAA +
Preference number: 4 (lower is better)
Translates to: SRMAVGPRGSNLPLEPHPRQKHL*CHFQDK
Trigger: TTTGTCTTGAAAGTGGCACCAGAGGTGCTTCTGCCT...TGGGTGAGGTTCCAATGGCAGGTTAGAGCCCCTCGGGCCAACTGCCATCCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CCA 90 bp CCAGGATGGCAGTTGGCCCGAGGGGCTCTAACCTGCCATTGGAACCTCACCCATAGGCAGAAGCACCTCTaGTGCCACTTTCAAGACAAA +
Preference number: 4 (lower is better)
Translates to: PGWQLARGALTCHWNLTHRQKHL*CHFQDK
Trigger: TTTGTCTTGAAAGTGGCACCAGAGGTGCTTCTGCCT...ATGGGTGAGGTTCCAATGGCAGGTTAGAGCCCCTCGGGCCAACTGCCATCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CCA 90 bp ATGACAGGGAGGAGGGCGAATCAAATCCATCATCTTACGCCAGACTTCAGCCCTCTCACTGCGGCTGTCTaGGCAGATGGCTGTTGGCAG +
Preference number: 4 (lower is better)
Translates to: MTGRRANQIHHLTPDFSPLTAAV*ADGCWQ
Trigger: CTGCCAACAGCCATCTGCCCAGACAGCCGCAGTGAG...AGGGCTGAAGTCTGGCGTAAGATGATGGATTTGATTCGCCCTCCTCCCTGTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CCA 90 bp AATTGTGAGTTACTCTTTCCACATGGCGACAGCCTGCAATGGGGGCTCCAGTTTCAGGTCTGGGGTTCGTaGCTCTGGCAAGCGCCCAGA +
Preference number: 4 (lower is better)
Translates to: NCELLFPHGDSLQWGLQFQVWGS*LWQAPR
Trigger: TCTGGGCGCTTGCCAGAGCCACGAACCCCAGACCTG...AAACTGGAGCCCCCATTGCAGGCTGTCGCCATGTGGAAAGAGTAACTCACAATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CCA 90 bp CGGATGATACAAACAGGTCTGGGGTTCGTGGCTCTGGCAAGCGCCCAGAGACAAGCTCTAACCTGCCATTaGAACCTCACCCATAGCCCA +
Preference number: 4 (lower is better)
Translates to: RMIQTGLGFVALASAQRQALTCH*NLTHSP
Trigger: TGGGCTATGGGTGAGGTTCCAATGGCAGGTTAGAGC...TTGTCTCTGGGCGCTTGCCAGAGCCACGAACCCCAGACCTGTTTGTATCATCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CCA 90 bp GCAGCTCAGATTCAACAGGCACCTGCCAAGTCCACACTCAGGACTGTGACAGCCGCTCTAACCTGCCATTaGAACCTCACCCATAGCCCA +
Preference number: 4 (lower is better)
Translates to: AAQIQQAPAKSTLRTVTAALTCH*NLTHSP
Trigger: TGGGCTATGGGTGAGGTTCCAATGGCAGGTTAGAGC...GGCTGTCACAGTCCTGAGTGTGGACTTGGCAGGTGCCTGTTGAATCTGAGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CCA 90 bp CCTTCCTCTTCATGTCCAGTTAAACAGACCCTGGCAAACATCAGGCTCTTCCTCGCCCGGCCCATTACATaGGGTCGTCATCTGGCTCCC +
Preference number: 4 (lower is better)
Translates to: PSSSCPVKQTLANIRLFLARPIT*GRHLAP
Trigger: GGGAGCCAGATGACGACCCCATGTAATGGGCCGGGC...GAGGAAGAGCCTGATGTTTGCCAGGGTCTGTTTAACTGGACATGAAGAGGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591800.1
CDS-3UTR TCA 90 bp CTTGACAGAAAGGAAAGCGCAACCGGACGAATGCTTTTTATGTTCCTCTCTCGTCAGTGGGGCAGTGGATaGAGCCAGCCTCGGCCATCC +
Preference number: 4 (lower is better)
Translates to: LDRKESATGRMLFMFLSRQWGSG*SQPRPS
Trigger: GGATGGCCGAGGCTGGCTTCATCCACTGCCCCACTG...ACGAGAGAGGAACATAAAAAGCATTCGTCCGGTTGCGCTTTCCTTTCTGTCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591800.1
CDS-3UTR TCA 90 bp TCCAGGATGGCAGTTGGCCCGAGGGGCTCTAACCTGCCATTGGAACCTCACCCACTTCAAACTGCTTCTTaGCAGAAAGGAAAGCGCAAC +
Preference number: 4 (lower is better)
Translates to: SRMAVGPRGSNLPLEPHPLQTAS*QKGKRN
Trigger: GTTGCGCTTTCCTTTCTGTCAAGAAGCAGTTTGAAG...TGGGTGAGGTTCCAATGGCAGGTTAGAGCCCCTCGGGCCAACTGCCATCCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301633.8
ENST00000350051.8
CDS-3UTR GCA 90 bp ACAGAAGCCGAGATCCACATCACCGCCTGGCATGCAAAGGAGTTGAAGACAAAATCCTTGAGAAAGGGCTaGCAGGCAGGGGGCAACGTC +
Preference number: 4 (lower is better)
Translates to: TEAEIHITAWHAKELKTKSLRKG*QAGGNV
Trigger: GACGTTGCCCCCTGCCTGGCAGCCCTTTCTCAAGGA...TTTTGTCTTCAACTCCTTTGCATGCCAGGCGGTGATGTGGATCTCGGCTTCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR GCA 90 bp AATTGTGAGTTACTCTTTCCACATGGCGACAGCCTGCAATGGGGGCTCCAGTTTTCCTTGAGAAAGGGCTaGCAGGCAGGGGGCAACGTC +
Preference number: 4 (lower is better)
Translates to: NCELLFPHGDSLQWGLQFSLRKG*QAGGNV
Trigger: GACGTTGCCCCCTGCCTGGCAGCCCTTTCTCAAGGA...AAACTGGAGCCCCCATTGCAGGCTGTCGCCATGTGGAAAGAGTAACTCACAATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR GCA 90 bp CCTTCCTCTTCATGTCCAGTTAAACAGACCCTGGCAAACATCAGGCTCTTCCTCTCCTTGAGAAAGGGCTaGCAGGCAGGGGGCAACGTC +
Preference number: 4 (lower is better)
Translates to: PSSSCPVKQTLANIRLFLSLRKG*QAGGNV
Trigger: GACGTTGCCCCCTGCCTGGCAGCCCTTTCTCAAGGA...GAGGAAGAGCCTGATGTTTGCCAGGGTCTGTTTAACTGGACATGAAGAGGAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000590925.6
ENST00000592734.5
CDS-3UTR GCA 90 bp TGCTTCTTGACAGAAAGGAAAGCGCAACCGGACGAATGCTTTTTATGTTCCTCTCCATCCGCTCCGGGGTaGAGGCGCAGCCCTCCAAGA +
Preference number: 4 (lower is better)
Translates to: CFLTERKAQPDECFLCSSPSAPG*RRSPPR
Trigger: TCTTGGAGGGCTGCGCCTGCACCCCGGAGCGGATGG...AGAGGAACATAAAAAGCATTCGTCCGGTTGCGCTTTCCTTTCTGTCAAGAAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586192.5
ENST00000591800.1
CDS-3UTR GCA 90 bp AGCAATGAGGGTGGAAAGCAACCCTCCCATACTAAGTGTCTTTGCAACTCAAATCCATCCGCTCCGGGGTaGAGGCGCAGCCCTCCAAGA +
Preference number: 4 (lower is better)
Translates to: SNEGGKQPSHTKCLCNSNPSAPG*RRSPPR
Trigger: TCTTGGAGGGCTGCGCCTGCACCCCGGAGCGGATGG...ATTTGAGTTGCAAAGACACTTAGTATGGGAGGGTTGCTTTCCACCCTCATTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590449.1
CDS-3UTR GCA 90 bp CCAGGATGGCAGTTGGCCCGAGGGGCTCTAACCTGCCATTGGAACCTCACCCATCAGAAGCACCTCTGGTaGCACTTTCAAGACAAAACA +
Preference number: 4 (lower is better)
Translates to: PGWQLARGALTCHWNLTHQKHLW*HFQDKT
Trigger: TGTTTTGTCTTGAAAGTGGCACCAGAGGTGCTTCTG...ATGGGTGAGGTTCCAATGGCAGGTTAGAGCCCCTCGGGCCAACTGCCATCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR GCA 90 bp CGGATGATACAAACAGGTCTGGGGTTCGTGGCTCTGGCAAGCGCCCAGAGACAATGTAACAATCCACCCTaGAGCTCTATGACAGGGAGG +
Preference number: 4 (lower is better)
Translates to: RMIQTGLGFVALASAQRQCNNPP*SSMTGR
Trigger: CCTCCCTGTCATAGAGCTGCAGGGTGGATTGTTACA...TTGTCTCTGGGCGCTTGCCAGAGCCACGAACCCCAGACCTGTTTGTATCATCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CCA 90 bp ACTGCGGCTGTCTGGGCAGATGGCTGTTGGCAGGCTAGGGACGACGATGAAAAAAATGTAGAGATGCGGTaGTCCTTGAGAAAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: TAAVWADGCWQARDDDEKNVEMR*SLRKGC
Trigger: GCAGCCCTTTCTCAAGGACCACCGCATCTCTACATT...TTTTTCATCGTCGTCCCTAGCCTGCCAACAGCCATCTGCCCAGACAGCCGCAGT
54% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CCA 90 bp AATTGTGAGTTACTCTTTCCACATGGCGACAGCCTGCAATGGGGGCTCCAGTTTTTCTCAGTGGGGCAGTaGATGAAGCCAGCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: NCELLFPHGDSLQWGLQFFSVGQ*MKPASA
Trigger: GGCCGAGGCTGGCTTCATCCACTGCCCCACTGAGAA...AAACTGGAGCCCCCATTGCAGGCTGTCGCCATGTGGAAAGAGTAACTCACAATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CCA 90 bp AGCCTTCCTCTTCATGTCCAGTTAAACAGACCCTGGCAAACATCAGGCTCTTCCTTCTCAGTGGGGCAGTaGATGAAGCCAGCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: SLPLHVQLNRPWQTSGSSFSVGQ*MKPASA
Trigger: GGCCGAGGCTGGCTTCATCCACTGCCCCACTGAGAA...GGAAGAGCCTGATGTTTGCCAGGGTCTGTTTAACTGGACATGAAGAGGAAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000586192.5
ENST00000587746.5
ENST00000590925.6
ENST00000591800.1
ENST00000592734.5
CDS-3UTR CCA 90 bp CCTCTTCATGTCCAGTTAAACAGACCCTGGCAAACATCAGGCTCTTCCTCGAACTTCTCAGTGGGGCAGTaGATGAAGCCAGCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: PLHVQLNRPWQTSGSSSNFSVGQ*MKPASA
Trigger: GGCCGAGGCTGGCTTCATCCACTGCCCCACTGAGAA...GTTCGAGGAAGAGCCTGATGTTTGCCAGGGTCTGTTTAACTGGACATGAAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000586192.5
ENST00000587746.5
ENST00000590925.6
ENST00000591800.1
ENST00000592734.5
CDS-3UTR CCA 90 bp AGGGTTAATTCTTCAAACTGCTTCTTGACAGAAAGGAAAGCGCAACCGGACGAACCGTGCCCGGCCCAATaGGGTCGTCATCTGGCTCCC +
Preference number: 4 (lower is better)
Translates to: RVNSSNCFLTERKAQPDEPCPAQ*GRHLAP
Trigger: GGGAGCCAGATGACGACCCCATTGGGCCGGGCACGG...TTCGTCCGGTTGCGCTTTCCTTTCTGTCAAGAAGCAGTTTGAAGAATTAACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586192.5
CDS-3UTR CCA 90 bp ATGACAGGGAGGAGGGCGAATCAAATCCATCATCTTACGCCAGACTTCAGCCCTAGAGGCCTCAATCCATaGCAGCCAGCTGCTCGATGG +
Preference number: 4 (lower is better)
Translates to: MTGRRANQIHHLTPDFSPRGLNP*QPAARW
Trigger: CCATCGAGCAGCTGGCTGCCATGGATTGAGGCCTCT...AGGGCTGAAGTCTGGCGTAAGATGATGGATTTGATTCGCCCTCCTCCCTGTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CCA 90 bp AGACTTCAGCCCTGCGGGAGCTGCTGCCTCCAAAGAAAGCGGGGACCTGGGCGGAGAGAACCTGAAAAATaGACATGTGGACATGTATCT +
Preference number: 4 (lower is better)
Translates to: RLQPCGSCCLQRKRGPGRREPEK*TCGHVS
Trigger: AGATACATGTCCACATGTCCATTTTTCAGGTTCTCT...CCGCCCAGGTCCCCGCTTTCTTTGGAGGCAGCAGCTCCCGCAGGGCTGAAGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CCA 90 bp ACAGAAGCCGAGATCCACATCACCGCCTGGCATGCAAAGGAGTTGAAGACAAAAGGCGACAGCCTGCAATaGGGGCTCCAGTTTGGCTTG +
Preference number: 4 (lower is better)
Translates to: TEAEIHITAWHAKELKTKGDSLQ*GLQFGL
Trigger: CAAGCCAAACTGGAGCCCCCATTGCAGGCTGTCGCC...TTTTGTCTTCAACTCCTTTGCATGCCAGGCGGTGATGTGGATCTCGGCTTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CCA 90 bp GAACCTGCAGCTCAGATTCAACAGGCACCTGCCAAGTCCACACTCAGGACTGTGGTTACTCTTTCCACATaGCGACAGCCTGCAATGGGG +
Preference number: 4 (lower is better)
Translates to: EPAAQIQQAPAKSTLRTVVTLST*RQPAMG
Trigger: CCCCATTGCAGGCTGTCGCCATGTGGAAAGAGTAAC...CACAGTCCTGAGTGTGGACTTGGCAGGTGCCTGTTGAATCTGAGCTGCAGGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CCA 90 bp AGGCTCACAGAAGCCGAGATCCACATCACCGCCTGGCATGCAAAGGAGTTGAAGGTTACTCTTTCCACATaGCGACAGCCTGCAATGGGG +
Preference number: 4 (lower is better)
Translates to: RLTEAEIHITAWHAKELKVTLST*RQPAMG
Trigger: CCCCATTGCAGGCTGTCGCCATGTGGAAAGAGTAAC...CTTCAACTCCTTTGCATGCCAGGCGGTGATGTGGATCTCGGCTTCTGTGAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CCA 90 bp GAGCCTTCCTCTTCATGTCCAGTTAAACAGACCCTGGCAAACATCAGGCTCTTCCATGGGGTCGTCATCTaGCTCCCAGCCTTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: EPSSSCPVKQTLANIRLFHGVVI*LPAFQL
Trigger: GAGCTGGAAGGCTGGGAGCCAGATGACGACCCCATG...GAAGAGCCTGATGTTTGCCAGGGTCTGTTTAACTGGACATGAAGAGGAAGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591800.1
ENST00000592734.5
CDS-3UTR TCA 90 bp TTCTCCCAGTTTAGAGGGAAAAGTCTATCTCAGGCCGACTCAGATGTGGCAGAAGCCACTGCCTTTTTCTaGGGGAGGAGCGGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: FSQFRGKSLSQADSDVAEATAFF*GRSGQH
Trigger: ATGCTGGCCGCTCCTCCCTCAGAAAAAGGCAGTGGC...TTCTGCCACATCTGAGTCGGCCTGAGATAGACTTTTCCCTCTAAACTGGGAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR GCA 90 bp TTTTTATTTCTCAGGAACAGCCGAGATGACCTCCAGAGGTTTCCAGCGAAGCTGTCCTTGAGAAAGGGCTaGCAGGCAGGGGGCAACGTC +
Preference number: 4 (lower is better)
Translates to: FLFLRNSRDDLQRFPAKLSLRKG*QAGGNV
Trigger: GACGTTGCCCCCTGCCTGGCAGCCCTTTCTCAAGGA...CAGCTTCGCTGGAAACCTCTGGAGGTCATCTCGGCTGTTCCTGAGAAATAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR GCA 90 bp ACTGCGGCTGTCTGGGCAGATGGCTGTTGGCAGGCTAGGGACGACGATGAAAAAGCGCAACCGGACGAATaGTTTTTATGTTCCTCTCTC +
Preference number: 4 (lower is better)
Translates to: TAAVWADGCWQARDDDEKAQPDE*FLCSSL
Trigger: GAGAGAGGAACATAAAAAGCATTCGTCCGGTTGCGC...TTTTTCATCGTCGTCCCTAGCCTGCCAACAGCCATCTGCCCAGACAGCCGCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000301633.8
CDS-3UTR GCA 90 bp CAAAAGGAGTATCTGCCAGACGCTTCCTATCACTCTATTCTGTCTCCTCATCCATCCATGGCAGCCAGCTaGTCGATGGCACGGCGCACT +
Preference number: 4 (lower is better)
Translates to: QKEYLPDASYHSILSPHPSMAAS*SMARRT
Trigger: AGTGCGCCGTGCCATCGAGCAGCTGGCTGCCATGGA...TGGATGAGGAGACAGAATAGAGTGATAGGAAGCGTCTGGCAGATACTCCTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR GCA 90 bp GCACTTAGACAAGGGCCTACGGCTTTATTAACAGATGTCGAGGAAGCTTTCAGGACCAGCAGCACCCGCTaGACAGGCAGAAGCACCTCT +
Preference number: 4 (lower is better)
Translates to: ALRQGPTALLTDVEEAFRTSSTR*TGRSTS
Trigger: AGAGGTGCTTCTGCCTGTGCAGCGGGTGCTGCTGGT...CCTGAAAGCTTCCTCGACATCTGTTAATAAAGCCGTAGGCCCTTGTCTAAGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR GCA 90 bp AGGCTCACAGAAGCCGAGATCCACATCACCGCCTGGCATGCAAAGGAGTTGAAGATTTTCAGTTGTTTCTaGCCGGAAGGAGCCCGGATG +
Preference number: 4 (lower is better)
Translates to: RLTEAEIHITAWHAKELKIFSCF*PEGARM
Trigger: CATCCGGGCTCCTTCCGGGCAGAAACAACTGAAAAT...CTTCAACTCCTTTGCATGCCAGGCGGTGATGTGGATCTCGGCTTCTGTGAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR GCA 90 bp GCACAGGCAGAAGCACCTCTGGTGCCACTTTCAAGACAAAACAAGAGCACAGTTCACATGGCGACAGCCTaGAATGGGGGCTCCAGTTTG +
Preference number: 4 (lower is better)
Translates to: AQAEAPLVPLSRQNKSTVHMATA*NGGSSL
Trigger: CAAACTGGAGCCCCCATTGCAGGCTGTCGCCATGTG...AACTGTGCTCTTGTTTTGTCTTGAAAGTGGCACCAGAGGTGCTTCTGCCTGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CCA 90 bp ATTGTTGGTTTCCTTTGCCTTTCTCCTGAAACTCCTGGAGGAAAGTCCAGAGCCTTCTCAGTGGGGCAGTaGATGAAGCCAGCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: IVGFLCLSPETPGGKSRAFSVGQ*MKPASA
Trigger: GGCCGAGGCTGGCTTCATCCACTGCCCCACTGAGAA...GGCTCTGGACTTTCCTCCAGGAGTTTCAGGAGAAAGGCAAAGGAAACCAACAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590925.6
CDS-3UTR CCA 90 bp TCCTCTTCATGTCCAGTTAAACAGACCCTGGCAAACATCAGGCTCTTCCTCGAATTCTCAGTGGGGCAGTaGATGAAGCCAGCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: SSSCPVKQTLANIRLFLEFSVGQ*MKPASA
Trigger: GGCCGAGGCTGGCTTCATCCACTGCCCCACTGAGAA...TTCGAGGAAGAGCCTGATGTTTGCCAGGGTCTGTTTAACTGGACATGAAGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000586192.5
ENST00000587746.5
ENST00000590925.6
ENST00000591800.1
ENST00000592734.5
CDS-3UTR CCA 90 bp GAGCCTTCCTCTTCATGTCCAGTTAAACAGACCCTGGCAAACATCAGGCTCTTCACACTGGGCCAAGTCTaGCTCGTTCTCAGTGGGGCA +
Preference number: 4 (lower is better)
Translates to: EPSSSCPVKQTLANIRLFTLGQV*LVLSGA
Trigger: TGCCCCACTGAGAACGAGCCAGACTTGGCCCAGTGT...GAAGAGCCTGATGTTTGCCAGGGTCTGTTTAACTGGACATGAAGAGGAAGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000586192.5
ENST00000587746.5
ENST00000590925.6
ENST00000591800.1
ENST00000592734.5
CDS-3UTR CCA 90 bp CCTCTTCATGTCCAGTTAAACAGACCCTGGCAAACATCAGGCTCTTCCTCGAACACACTGGGCCAAGTCTaGCTCGTTCTCAGTGGGGCA +
Preference number: 4 (lower is better)
Translates to: PLHVQLNRPWQTSGSSSNTLGQV*LVLSGA
Trigger: TGCCCCACTGAGAACGAGCCAGACTTGGCCCAGTGT...GTTCGAGGAAGAGCCTGATGTTTGCCAGGGTCTGTTTAACTGGACATGAAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000586192.5
ENST00000587746.5
ENST00000590925.6
ENST00000591800.1
ENST00000592734.5
CDS-3UTR CCA 90 bp CTTCCTCTTCATGTCCAGTTAAACAGACCCTGGCAAACATCAGGCTCTTCCTCGAATGGGGTCGTCATCTaGCTCCCAGCCTTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: LPLHVQLNRPWQTSGSSSNGVVI*LPAFQL
Trigger: GAGCTGGAAGGCTGGGAGCCAGATGACGACCCCATT...CGAGGAAGAGCCTGATGTTTGCCAGGGTCTGTTTAACTGGACATGAAGAGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586192.5
ENST00000587746.5
CDS-3UTR CCA 90 bp TGTCCAGTTAAACAGACCCTGGCAAACATCAGGCTCTTCCTCGAACAGAAATTCCAGCCAGCTGCTCGATaGCACGGCGCACTTTCTCCG +
Preference number: 4 (lower is better)
Translates to: CPVKQTLANIRLFLEQKFQPAAR*HGALSP
Trigger: CGGAGAAAGTGCGCCGTGCCATCGAGCAGCTGGCTG...GAATTTCTGTTCGAGGAAGAGCCTGATGTTTGCCAGGGTCTGTTTAACTGGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590925.6
CDS-3UTR CCA 90 bp AAAAGGAGTATCTGCCAGACGCTTCCTATCACTCTATTCTGTCTCCTCATCCACAAGAAAGCGGGGACCTaGGCGGACTGCGTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: KRSICQTLPITLFCLLIHKKAGT*ADCVSP
Trigger: GGGAGAGACGCAGTCCGCCCAGGTCCCCGCTTTCTT...GTGGATGAGGAGACAGAATAGAGTGATAGGAAGCGTCTGGCAGATACTCCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CCA 90 bp ACAGAAGCCGAGATCCACATCACCGCCTGGCATGCAAAGGAGTTGAAGACAAAATATGGGGTCGTCATCTaGCTCCCAGCCTTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: TEAEIHITAWHAKELKTKYGVVI*LPAFQL
Trigger: GAGCTGGAAGGCTGGGAGCCAGATGACGACCCCATA...TTTTGTCTTCAACTCCTTTGCATGCCAGGCGGTGATGTGGATCTCGGCTTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350051.8
CDS-3UTR CCA 90 bp CCTTCCTCTTCATGTCCAGTTAAACAGACCCTGGCAAACATCAGGCTCTTCCTCTATGGGGTCGTCATCTaGCTCCCAGCCTTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: PSSSCPVKQTLANIRLFLYGVVI*LPAFQL
Trigger: GAGCTGGAAGGCTGGGAGCCAGATGACGACCCCATA...GAGGAAGAGCCTGATGTTTGCCAGGGTCTGTTTAACTGGACATGAAGAGGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590925.6
CDS-3UTR TCA 90 bp CATGTCCAGTTAAACAGACCCTGGCAAACATCAGGCTCTTCCTCGAACAGAAATAGATGCGGTGGTCCTTaGGAAAGGGCTGCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: HVQLNRPWQTSGSSSNRNRCGGP*ERAARQ
Trigger: CTGCCTGGCAGCCCTTTCTCAAGGACCACCGCATCT...ATTTCTGTTCGAGGAAGAGCCTGATGTTTGCCAGGGTCTGTTTAACTGGACATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590925.6
ENST00000592734.5
CDS-3UTR TCA 90 bp GCACTTAGACAAGGGCCTACGGCTTTATTAACAGATGTCGAGGAAGCTTTCAGGCGGAAGGAGCCCGGATaGTACAAACAGGTCTGGGGT +
Preference number: 4 (lower is better)
Translates to: ALRQGPTALLTDVEEAFRRKEPG*YKQVWG
Trigger: ACCCCAGACCTGTTTGTATCATCCGGGCTCCTTCCG...CCTGAAAGCTTCCTCGACATCTGTTAATAAAGCCGTAGGCCCTTGTCTAAGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR TCA 90 bp AAGCGCCCAGAGACAACTGCGTCTCTGCCAGGACGCTCATCCTCACTGCGGCTGAGAAATAAGTGGGTCTaGAGTGCATTTTCAGTTGTT +
Preference number: 4 (lower is better)
Translates to: KRPETTASLPGRSSSLRLRNKWV*SAFSVV
Trigger: AACAACTGAAAATGCACTTCAGACCCACTTATTTCT...CAGCCGCAGTGAGGATGAGCGTCCTGGCAGAGACGCAGTTGTCTCTGGGCGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR TCA 90 bp GGCACAGGTGTGACAGATAAGGAACCTGCAGCTCAGATTCAACAGGCACCTGCCAATAAGCAGCTTAGATaGGTACAGAGGCTGGAGTGC +
Preference number: 4 (lower is better)
Translates to: GTGVTDKEPAAQIQQAPANKQLR*VQRLEC
Trigger: GCACTCCAGCCTCTGTACTCATCTAAGCTGCTTATT...GGCAGGTGCCTGTTGAATCTGAGCTGCAGGTTCCTTATCTGTCACACCTGTGCC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR TCA 90 bp TCCATCATCTTACGCCAGACTTCAGCCCTGCGGGAGCTGCTGCCTCCAAAGAAAAATAAGCAGCTTAGATaGGTACAGAGGCTGGAGTGC +
Preference number: 4 (lower is better)
Translates to: SIILRQTSALRELLPPKKNKQLR*VQRLEC
Trigger: GCACTCCAGCCTCTGTACTCATCTAAGCTGCTTATT...TTTCTTTGGAGGCAGCAGCTCCCGCAGGGCTGAAGTCTGGCGTAAGATGATGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR TCA 90 bp CCAGGATGGCAGTTGGCCCGAGGGGCTCTAACCTGCCATTGGAACCTCACCCATCTTTATTGGCAATTGTaGGTTACTCTTTCCACATGG +
Preference number: 4 (lower is better)
Translates to: PGWQLARGALTCHWNLTHLYWQL*VTLSTW
Trigger: CCATGTGGAAAGAGTAACTCACAATTGCCAATAAAG...ATGGGTGAGGTTCCAATGGCAGGTTAGAGCCCCTCGGGCCAACTGCCATCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR GCA 90 bp GTCCAGTTAAACAGACCCTGGCAAACATCAGGCTCTTCCTCGAACAGAAATTCTTCCTTGAGAAAGGGCTaGCAGGCAGGGGGCAACGTC +
Preference number: 4 (lower is better)
Translates to: VQLNRPWQTSGSSSNRNSSLRKG*QAGGNV
Trigger: GACGTTGCCCCCTGCCTGGCAGCCCTTTCTCAAGGA...AGAATTTCTGTTCGAGGAAGAGCCTGATGTTTGCCAGGGTCTGTTTAACTGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000590925.6
ENST00000592734.5
CDS-3UTR GCA 90 bp TTATTGTTGGTTTCCTTTGCCTTTCTCCTGAAACTCCTGGAGGAAAGTCCAGAGTCCATGGCAGCCAGCTaGTCGATGGCACGGCGCACT +
Preference number: 4 (lower is better)
Translates to: LLLVSFAFLLKLLEESPESMAAS*SMARRT
Trigger: AGTGCGCCGTGCCATCGAGCAGCTGGCTGCCATGGA...CTCTGGACTTTCCTCCAGGAGTTTCAGGAGAAAGGCAAAGGAAACCAACAATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590925.6
CDS-3UTR GCA 90 bp TGGCTTGCTGGTCTCTTCTGGGCAGCGGGCACTGCTGTCTCTACTTTCCAGGATCAGAAGCACCTCTGGTaGCACTTTCAAGACAAAACA +
Preference number: 4 (lower is better)
Translates to: WLAGLFWAAGTAVSTFQDQKHLW*HFQDKT
Trigger: TGTTTTGTCTTGAAAGTGGCACCAGAGGTGCTTCTG...ATCCTGGAAAGTAGAGACAGCAGTGCCCGCTGCCCAGAAGAGACCAGCAAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR GCA 90 bp ATGACAGGGAGGAGGGCGAATCAAATCCATCATCTTACGCCAGACTTCAGCCCTGATTCAACAGGCACCTaGCAAGTCCACACTCAGGAC +
Preference number: 4 (lower is better)
Translates to: MTGRRANQIHHLTPDFSPDSTGT*QVHTQD
Trigger: GTCCTGAGTGTGGACTTGGCAGGTGCCTGTTGAATC...AGGGCTGAAGTCTGGCGTAAGATGATGGATTTGATTCGCCCTCCTCCCTGTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR GCA 90 bp ACAGCCGAGATGACCTCCAGAGGTTTCCAGCGAAGCTGTAACAATCCACCCTGCGGCAAAAGGAGTATCTaGCAGACGCTTCCTATCACT +
Preference number: 4 (lower is better)
Translates to: TAEMTSRGFQRSCNNPPCGKRSI*QTLPIT
Trigger: AGTGATAGGAAGCGTCTGGCAGATACTCCTTTTGCC...GCAGGGTGGATTGTTACAGCTTCGCTGGAAACCTCTGGAGGTCATCTCGGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR GCA 90 bp TCAAAAATAAGCAGCTTAGATGAGTACAGAGGCTGGAGTGCATTTTCTGCTAACGGGACCTGGGCGGACTaGGTCTCTCCCCCGTGTGGA +
Preference number: 4 (lower is better)
Translates to: SKISSLDEYRGWSAFSANGTWAD*VSPPCG
Trigger: TCCACACGGGGGAGAGACGCAGTCCGCCCAGGTCCC...GTTAGCAGAAAATGCACTCCAGCCTCTGTACTCATCTAAGCTGCTTATTTTTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR GCA 90 bp GCTTTTTATTTCTCAGGAACAGCCGAGATGACCTCCAGAGGTTTCCAGCGAAGCAGACAACTGCGTCTCTaGCAGGACGCTCATCCTCAC +
Preference number: 4 (lower is better)
Translates to: AFYFSGTAEMTSRGFQRSRQLRL*QDAHPH
Trigger: GTGAGGATGAGCGTCCTGGCAGAGACGCAGTTGTCT...GCTTCGCTGGAAACCTCTGGAGGTCATCTCGGCTGTTCCTGAGAAATAAAAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR GCA 90 bp AAGCTTTCAGGTGCTGGTAGCCATGAGGGTCTGGTTTTAAGGATGGCCTTTAAGCACATGGCGACAGCCTaGAATGGGGGCTCCAGTTTG +
Preference number: 4 (lower is better)
Translates to: KLSGAGSHEGLVLRMAFKHMATA*NGGSSL
Trigger: CAAACTGGAGCCCCCATTGCAGGCTGTCGCCATGTG...CTTAAAGGCCATCCTTAAAACCAGACCCTCATGGCTACCAGCACCTGAAAGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CCA 90 bp CACAACCCTTCCCAGACTCCACTCCAACTTAGAGAACCTGAAAAATGGACATGTTTCTCAGTGGGGCAGTaGATGAAGCCAGCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: HNPSQTPLQLREPEKWTCFSVGQ*MKPASA
Trigger: GGCCGAGGCTGGCTTCATCCACTGCCCCACTGAGAA...ACATGTCCATTTTTCAGGTTCTCTAAGTTGGAGTGGAGTCTGGGAAGGGTTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CCA 90 bp TCAAAAATAAGCAGCTTAGATGAGTACAGAGGCTGGAGTGCATTTTCTGCTAACCCGTGCCCGGCCCAATaGGGTCGTCATCTGGCTCCC +
Preference number: 4 (lower is better)
Translates to: SKISSLDEYRGWSAFSANPCPAQ*GRHLAP
Trigger: GGGAGCCAGATGACGACCCCATTGGGCCGGGCACGG...GTTAGCAGAAAATGCACTCCAGCCTCTGTACTCATCTAAGCTGCTTATTTTTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301633.8
CDS-3UTR CCA 90 bp AATTGTGAGTTACTCTTTCCACATGGCGACAGCCTGCAATGGGGGCTCCAGTTTGACAGATGTGAAGGTTaGGCTGACAGACACACGGCC +
Preference number: 4 (lower is better)
Translates to: NCELLFPHGDSLQWGLQFDRCEG*ADRHTA
Trigger: GGCCGTGTGTCTGTCAGCCCAACCTTCACATCTGTC...AAACTGGAGCCCCCATTGCAGGCTGTCGCCATGTGGAAAGAGTAACTCACAATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CCA 90 bp TCATGTCCAGTTAAACAGACCCTGGCAAACATCAGGCTCTTCCTCGAACAGAAACATGGGGTCGTCATCTaGCTCCCAGCCTTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: SCPVKQTLANIRLFLEQKHGVVI*LPAFQL
Trigger: GAGCTGGAAGGCTGGGAGCCAGATGACGACCCCATG...TTTCTGTTCGAGGAAGAGCCTGATGTTTGCCAGGGTCTGTTTAACTGGACATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591800.1
ENST00000592734.5
CDS-3UTR CCA 90 bp AGCCTTCCTCTTCATGTCCAGTTAAACAGACCCTGGCAAACATCAGGCTCTTCCAACAGAGCTCTCTCATaGGGTCGTCATCTGGCTCCC +
Preference number: 4 (lower is better)
Translates to: SLPLHVQLNRPWQTSGSSNRALS*GRHLAP
Trigger: GGGAGCCAGATGACGACCCCATGAGAGAGCTCTGTT...GGAAGAGCCTGATGTTTGCCAGGGTCTGTTTAACTGGACATGAAGAGGAAGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592734.5
CDS-3UTR TCA 90 bp AGCAATGAGGGTGGAAAGCAACCCTCCCATACTAAGTGTCTTTGCAACTCAAATAGATGCGGTGGTCCTTaGGAAAGGGCTGCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: SNEGGKQPSHTKCLCNSNRCGGP*ERAARQ
Trigger: CTGCCTGGCAGCCCTTTCTCAAGGACCACCGCATCT...ATTTGAGTTGCAAAGACACTTAGTATGGGAGGGTTGCTTTCCACCCTCATTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590449.1
CDS-3UTR TCA 90 bp CCTTCCTCTTCATGTCCAGTTAAACAGACCCTGGCAAACATCAGGCTCTTCCTCAGCCTTCCAGCTCCTTaGAGCAGAAGAAACACTGGG +
Preference number: 4 (lower is better)
Translates to: PSSSCPVKQTLANIRLFLSLPAP*SRRNTG
Trigger: CCCAGTGTTTCTTCTGCTTCAAGGAGCTGGAAGGCT...GAGGAAGAGCCTGATGTTTGCCAGGGTCTGTTTAACTGGACATGAAGAGGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586192.5
ENST00000587746.5
ENST00000590925.6
ENST00000591800.1
ENST00000592734.5
CDS-3UTR TCA 90 bp CTTCCTCTTCATGTCCAGTTAAACAGACCCTGGCAAACATCAGGCTCTTCCTCGAGCCTTCCAGCTCCTTaGAGCAGAAGAAACACTGGG +
Preference number: 4 (lower is better)
Translates to: LPLHVQLNRPWQTSGSSSSLPAP*SRRNTG
Trigger: CCCAGTGTTTCTTCTGCTTCAAGGAGCTGGAAGGCT...CGAGGAAGAGCCTGATGTTTGCCAGGGTCTGTTTAACTGGACATGAAGAGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586192.5
ENST00000587746.5
ENST00000590925.6
ENST00000591800.1
ENST00000592734.5
CDS-3UTR TCA 90 bp AAGCTTTCAGGTGCTGGTAGCCATGAGGGTCTGGTTTTAAGGATGGCCTTTAAGGAGGAGGCACAGGTGTaGCAGATAAGGAACCTGCAG +
Preference number: 4 (lower is better)
Translates to: KLSGAGSHEGLVLRMAFKEEAQV*QIRNLQ
Trigger: CTGCAGGTTCCTTATCTGTCACACCTGTGCCTCCTC...CTTAAAGGCCATCCTTAAAACCAGACCCTCATGGCTACCAGCACCTGAAAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR TCA 90 bp ATGACAGGGAGGAGGGCGAATCAAATCCATCATCTTACGCCAGACTTCAGCCCTACCCCGTTTCCCCAATaGCTTAGAATGGCTTTGTGC +
Preference number: 4 (lower is better)
Translates to: MTGRRANQIHHLTPDFSPTPFPQ*LRMALC
Trigger: GCACAAAGCCATTCTAAGTCATTGGGGAAACGGGGT...AGGGCTGAAGTCTGGCGTAAGATGATGGATTTGATTCGCCCTCCTCCCTGTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR TCA 90 bp TCCCAGTTTAGAGGGAAAAGTCTATCTCAGGCCGACTCAGATGTGGCAGAAATACGGAAGGAGCCCGGATaGTACAAACAGGTCTGGGGT +
Preference number: 4 (lower is better)
Translates to: SQFRGKSLSQADSDVAEIRKEPG*YKQVWG
Trigger: ACCCCAGACCTGTTTGTATCATCCGGGCTCCTTCCG...TATTTCTGCCACATCTGAGTCGGCCTGAGATAGACTTTTCCCTCTAAACTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR TCA 90 bp CTGCGGCTGTCTGGGCAGATGGCTGTTGGCAGGCTAGGGACGACGATGAAAAACCTTTATTGGCAATTGTaGGTTACTCTTTCCACATGG +
Preference number: 4 (lower is better)
Translates to: LRLSGQMAVGRLGTTMKNLYWQL*VTLSTW
Trigger: CCATGTGGAAAGAGTAACTCACAATTGCCAATAAAG...GTTTTTCATCGTCGTCCCTAGCCTGCCAACAGCCATCTGCCCAGACAGCCGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR TCA 90 bp GGTTTCCTTTGCCTTTCTCCTGAAACTCCTGGAGGAAAGTCCAGAGCCTTCCTCCCTTTGCCTTTCTCCTaGAACTCCTGGAGGAAAGTC +
Preference number: 4 (lower is better)
Translates to: GFLCLSPETPGGKSRAFLPLPFS*NSWRKV
Trigger: GACTTTCCTCCAGGAGTTTCAGGAGAAAGGCAAAGG...GAGGAAGGCTCTGGACTTTCCTCCAGGAGTTTCAGGAGAAAGGCAAAGGAAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590925.6
CDS-3UTR GCA 90 bp GCATATAGAGAGGTATCCGTTCACAACAGCTGTTTAAGAAGCAATGAGGGTGGATCCTTGAGAAAGGGCTaGCAGGCAGGGGGCAACGTC +
Preference number: 4 (lower is better)
Translates to: AYREVSVHNSCLRSNEGGSLRKG*QAGGNV
Trigger: GACGTTGCCCCCTGCCTGGCAGCCCTTTCTCAAGGA...TCCACCCTCATTGCTTCTTAAACAGCTGTTGTGAACGGATACCTCTCTATATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590449.1
CDS-3UTR GCA 90 bp AAGTCATTTAAAAAGGATTTAGGCCACTGCCTTTTTCTGAGGGAGGAGCGGCCAAAACCCTGGAAGTGGTaGAGCCACTCTGGGACCAGG +
Preference number: 4 (lower is better)
Translates to: KSFKKDLGHCLFLREERPKPWKW*SHSGTR
Trigger: CCTGGTCCCAGAGTGGCTGCACCACTTCCAGGGTTT...TGGCCGCTCCTCCCTCAGAAAAAGGCAGTGGCCTAAATCCTTTTTAAATGACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR GCA 90 bp TCCCAGTTTAGAGGGAAAAGTCTATCTCAGGCCGACTCAGATGTGGCAGAAATAAAACCCTGGAAGTGGTaGAGCCACTCTGGGACCAGG +
Preference number: 4 (lower is better)
Translates to: SQFRGKSLSQADSDVAEIKPWKW*SHSGTR
Trigger: CCTGGTCCCAGAGTGGCTGCACCACTTCCAGGGTTT...TATTTCTGCCACATCTGAGTCGGCCTGAGATAGACTTTTCCCTCTAAACTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR GCA 90 bp TTTTTATTTCTCAGGAACAGCCGAGATGACCTCCAGAGGTTTCCAGCGAAGCTGCACTGTGGAAGGCTCTaGCCACGCGAACAAAGCTGT +
Preference number: 4 (lower is better)
Translates to: FLFLRNSRDDLQRFPAKLHCGRL*PREQSC
Trigger: ACAGCTTTGTTCGCGTGGGCAGAGCCTTCCACAGTG...CAGCTTCGCTGGAAACCTCTGGAGGTCATCTCGGCTGTTCCTGAGAAATAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR GCA 90 bp TTTTTATTTCTCAGGAACAGCCGAGATGACCTCCAGAGGTTTCCAGCGAAGCTGAGACAACTGCGTCTCTaGCAGGACGCTCATCCTCAC +
Preference number: 4 (lower is better)
Translates to: FLFLRNSRDDLQRFPAKLRQLRL*QDAHPH
Trigger: GTGAGGATGAGCGTCCTGGCAGAGACGCAGTTGTCT...CAGCTTCGCTGGAAACCTCTGGAGGTCATCTCGGCTGTTCCTGAGAAATAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR GCA 90 bp CACAACCCTTCCCAGACTCCACTCCAACTTAGAGAACCTGAAAAATGGACATGTGGCTCCAGTTTGGCTTaGTGGTCTCTTCTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: HNPSQTPLQLREPEKWTCGSSLA*WSLLGS
Trigger: GCTGCCCAGAAGAGACCAGCAAGCCAAACTGGAGCC...ACATGTCCATTTTTCAGGTTCTCTAAGTTGGAGTGGAGTCTGGGAAGGGTTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CCA 90 bp GTCCAGTTAAACAGACCCTGGCAAACATCAGGCTCTTCCTCGAACAGAAATTCTACACTGGGCCAAGTCTaGCTCGTTCTCAGTGGGGCA +
Preference number: 4 (lower is better)
Translates to: VQLNRPWQTSGSSSNRNSTLGQV*LVLSGA
Trigger: TGCCCCACTGAGAACGAGCCAGACTTGGCCCAGTGT...AGAATTTCTGTTCGAGGAAGAGCCTGATGTTTGCCAGGGTCTGTTTAACTGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000586192.5
ENST00000587746.5
ENST00000590925.6
ENST00000591800.1
ENST00000592734.5
CDS-3UTR CCA 90 bp TCATGTCCAGTTAAACAGACCCTGGCAAACATCAGGCTCTTCCTCGAACAGAAAACACTGGGCCAAGTCTaGCTCGTTCTCAGTGGGGCA +
Preference number: 4 (lower is better)
Translates to: SCPVKQTLANIRLFLEQKTLGQV*LVLSGA
Trigger: TGCCCCACTGAGAACGAGCCAGACTTGGCCCAGTGT...TTTCTGTTCGAGGAAGAGCCTGATGTTTGCCAGGGTCTGTTTAACTGGACATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000586192.5
ENST00000587746.5
ENST00000590925.6
ENST00000591800.1
ENST00000592734.5
CDS-3UTR CCA 90 bp TCATGTCCAGTTAAACAGACCCTGGCAAACATCAGGCTCTTCCTCGAACAGAAAAATGGGGTCGTCATCTaGCTCCCAGCCTTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: SCPVKQTLANIRLFLEQKNGVVI*LPAFQL
Trigger: GAGCTGGAAGGCTGGGAGCCAGATGACGACCCCATT...TTTCTGTTCGAGGAAGAGCCTGATGTTTGCCAGGGTCTGTTTAACTGGACATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586192.5
ENST00000587746.5
CDS-3UTR CCA 90 bp ATTCTGTTGAACATGAAAGGCATCAGGCATCTTACGTCCACCCCAAGGCATTTTCATGGGGTCGTCATCTaGCTCCCAGCCTTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: ILLNMKGIRHLTSTPRHFHGVVI*LPAFQL
Trigger: GAGCTGGAAGGCTGGGAGCCAGATGACGACCCCATG...AAAATGCCTTGGGGTGGACGTAAGATGCCTGATGCCTTTCATGTTCAACAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000590449.1
CDS-3UTR TCA 90 bp CTCCAACTTAGAGAACCTGAAAAATGGACATGTGGACATGTATCTGAAAGAAAGCAGTGGGGCAGTGGATaGAGCCAGCCTCGGCCATCC +
Preference number: 4 (lower is better)
Translates to: LQLREPEKWTCGHVSERKQWGSG*SQPRPS
Trigger: GGATGGCCGAGGCTGGCTTCATCCACTGCCCCACTG...CTTTCTTTCAGATACATGTCCACATGTCCATTTTTCAGGTTCTCTAAGTTGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR TCA 90 bp CTCAATTTTGTTCTTGGCTCTTTCTCTGTCCAGTTTCAAAAATTCACCAAGGGTCAGTGGGGCAGTGGATaGAGCCAGCCTCGGCCATCC +
Preference number: 4 (lower is better)
Translates to: LNFVLGSFSVQFQKFTKGQWGSG*SQPRPS
Trigger: GGATGGCCGAGGCTGGCTTCATCCACTGCCCCACTG...ACCCTTGGTGAATTTTTGAAACTGGACAGAGAAAGAGCCAAGAACAAAATTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000586192.5
ENST00000591800.1
CDS-3UTR TCA 90 bp AAGCTTTCAGGTGCTGGTAGCCATGAGGGTCTGGTTTTAAGGATGGCCTTTAAGAGCCTTCCAGCTCCTTaGAGCAGAAGAAACACTGGG +
Preference number: 4 (lower is better)
Translates to: KLSGAGSHEGLVLRMAFKSLPAP*SRRNTG
Trigger: CCCAGTGTTTCTTCTGCTTCAAGGAGCTGGAAGGCT...CTTAAAGGCCATCCTTAAAACCAGACCCTCATGGCTACCAGCACCTGAAAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR TCA 90 bp TCTTCATGTCCAGTTAAACAGACCCTGGCAAACATCAGGCTCTTCCTCGAACAGAGCCTTCCAGCTCCTTaGAGCAGAAGAAACACTGGG +
Preference number: 4 (lower is better)
Translates to: SSCPVKQTLANIRLFLEQSLPAP*SRRNTG
Trigger: CCCAGTGTTTCTTCTGCTTCAAGGAGCTGGAAGGCT...CTGTTCGAGGAAGAGCCTGATGTTTGCCAGGGTCTGTTTAACTGGACATGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586192.5
ENST00000587746.5
ENST00000590925.6
ENST00000591800.1
ENST00000592734.5
CDS-3UTR TCA 90 bp TCCTCTTCATGTCCAGTTAAACAGACCCTGGCAAACATCAGGCTCTTCCTCGAAAGCCTTCCAGCTCCTTaGAGCAGAAGAAACACTGGG +
Preference number: 4 (lower is better)
Translates to: SSSCPVKQTLANIRLFLESLPAP*SRRNTG
Trigger: CCCAGTGTTTCTTCTGCTTCAAGGAGCTGGAAGGCT...TTCGAGGAAGAGCCTGATGTTTGCCAGGGTCTGTTTAACTGGACATGAAGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586192.5
ENST00000587746.5
ENST00000590925.6
ENST00000591800.1
ENST00000592734.5
CDS-3UTR TCA 90 bp AAACAGGTCTGGGGTTCGTGGCTCTGGCAAGCGCCCAGAGACAACTGCGTCTCTCAGCAGTGTTTGAAATaGCAGGCTTTTTATTTCTCA +
Preference number: 4 (lower is better)
Translates to: KQVWGSWLWQAPRDNCVSQQCLK*QAFYFS
Trigger: TGAGAAATAAAAAGCCTGTCATTTCAAACACTGCTG...AGAGACGCAGTTGTCTCTGGGCGCTTGCCAGAGCCACGAACCCCAGACCTGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR TCA 90 bp GCAGCTCAGATTCAACAGGCACCTGCCAAGTCCACACTCAGGACTGTGACAGCCCTTTATTGGCAATTGTaGGTTACTCTTTCCACATGG +
Preference number: 4 (lower is better)
Translates to: AAQIQQAPAKSTLRTVTALYWQL*VTLSTW
Trigger: CCATGTGGAAAGAGTAACTCACAATTGCCAATAAAG...GGCTGTCACAGTCCTGAGTGTGGACTTGGCAGGTGCCTGTTGAATCTGAGCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR GCA 90 bp CAATTTTGTTCTTGGCTCTTTCTCTGTCCAGTTTCAAAAATTCACCAAGGGTTACCATCCGCTCCGGGGTaGAGGCGCAGCCCTCCAAGA +
Preference number: 4 (lower is better)
Translates to: QFCSWLFLCPVSKIHQGLPSAPG*RRSPPR
Trigger: TCTTGGAGGGCTGCGCCTGCACCCCGGAGCGGATGG...TAACCCTTGGTGAATTTTTGAAACTGGACAGAGAAAGAGCCAAGAACAAAATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000586192.5
ENST00000591800.1
CDS-3UTR CCA 90 bp GCTTTTTATTTCTCAGGAACAGCCGAGATGACCTCCAGAGGTTTCCAGCGAAGCAATGTAGAGATGCGGTaGTCCTTGAGAAAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: AFYFSGTAEMTSRGFQRSNVEMR*SLRKGC
Trigger: GCAGCCCTTTCTCAAGGACCACCGCATCTCTACATT...GCTTCGCTGGAAACCTCTGGAGGTCATCTCGGCTGTTCCTGAGAAATAAAAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CCA 90 bp AATGAGGGTGGAAAGCAACCCTCCCATACTAAGTGTCTTTGCAACTCAAATCTTTTCTCAGTGGGGCAGTaGATGAAGCCAGCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: NEGGKQPSHTKCLCNSNLFSVGQ*MKPASA
Trigger: GGCCGAGGCTGGCTTCATCCACTGCCCCACTGAGAA...AAGATTTGAGTTGCAAAGACACTTAGTATGGGAGGGTTGCTTTCCACCCTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590449.1
CDS-3UTR CCA 90 bp AGCAATGAGGGTGGAAAGCAACCCTCCCATACTAAGTGTCTTTGCAACTCAAATACACTGGGCCAAGTCTaGCTCGTTCTCAGTGGGGCA +
Preference number: 4 (lower is better)
Translates to: SNEGGKQPSHTKCLCNSNTLGQV*LVLSGA
Trigger: TGCCCCACTGAGAACGAGCCAGACTTGGCCCAGTGT...ATTTGAGTTGCAAAGACACTTAGTATGGGAGGGTTGCTTTCCACCCTCATTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590449.1
CDS-3UTR CCA 90 bp GCTTTTTATTTCTCAGGAACAGCCGAGATGACCTCCAGAGGTTTCCAGCGAAGCAAGCAGAAGAAACACTaGGCCAAGTCTGGCTCGTTC +
Preference number: 4 (lower is better)
Translates to: AFYFSGTAEMTSRGFQRSKQKKH*AKSGSF
Trigger: GAACGAGCCAGACTTGGCCCAGTGTTTCTTCTGCTT...GCTTCGCTGGAAACCTCTGGAGGTCATCTCGGCTGTTCCTGAGAAATAAAAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CCA 90 bp CTTCCTCTTCATGTCCAGTTAAACAGACCCTGGCAAACATCAGGCTCTTCCTCGAAGCAGAAGAAACACTaGGCCAAGTCTGGCTCGTTC +
Preference number: 4 (lower is better)
Translates to: LPLHVQLNRPWQTSGSSSKQKKH*AKSGSF
Trigger: GAACGAGCCAGACTTGGCCCAGTGTTTCTTCTGCTT...CGAGGAAGAGCCTGATGTTTGCCAGGGTCTGTTTAACTGGACATGAAGAGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586192.5
ENST00000587746.5
ENST00000590925.6
ENST00000591800.1
ENST00000592734.5
CDS-3UTR CCA 90 bp TCAAAAATAAGCAGCTTAGATGAGTACAGAGGCTGGAGTGCATTTTCTGCTAACCAGCCAGCTGCTCGATaGCACGGCGCACTTTCTCCG +
Preference number: 4 (lower is better)
Translates to: SKISSLDEYRGWSAFSANQPAAR*HGALSP
Trigger: CGGAGAAAGTGCGCCGTGCCATCGAGCAGCTGGCTG...GTTAGCAGAAAATGCACTCCAGCCTCTGTACTCATCTAAGCTGCTTATTTTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CCA 90 bp GCACAGGCAGAAGCACCTCTGGTGCCACTTTCAAGACAAAACAAGAGCACAGTTATCCACATCACCGCCTaGCATGCAAAGGAGTTGAAG +
Preference number: 4 (lower is better)
Translates to: AQAEAPLVPLSRQNKSTVIHITA*HAKELK
Trigger: CTTCAACTCCTTTGCATGCCAGGCGGTGATGTGGAT...AACTGTGCTCTTGTTTTGTCTTGAAAGTGGCACCAGAGGTGCTTCTGCCTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CCA 90 bp TTCTCCCAGTTTAGAGGGAAAAGTCTATCTCAGGCCGACTCAGATGTGGCAGAAGTTACTCTTTCCACATaGCGACAGCCTGCAATGGGG +
Preference number: 4 (lower is better)
Translates to: FSQFRGKSLSQADSDVAEVTLST*RQPAMG
Trigger: CCCCATTGCAGGCTGTCGCCATGTGGAAAGAGTAAC...TTCTGCCACATCTGAGTCGGCCTGAGATAGACTTTTCCCTCTAAACTGGGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CCA 90 bp ATTTTCAGTTGTTTCTGCCCGGAAGGAGCCCGGATGATACAAACAGGTCTGGGGTTTTATGTTCCTCTATaGGGTCGTCATCTGGCTCCC +
Preference number: 4 (lower is better)
Translates to: IFSCFCPEGARMIQTGLGFYVPL*GRHLAP
Trigger: GGGAGCCAGATGACGACCCCATAGAGGAACATAAAA...CCCCAGACCTGTTTGTATCATCCGGGCTCCTTCCGGGCAGAAACAACTGAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000350051.8
CDS-3UTR CCA 90 bp AAGCTTTCAGGTGCTGGTAGCCATGAGGGTCTGGTTTTAAGGATGGCCTTTAAGTTGGTTTCCTTTGCATaGGGTCGTCATCTGGCTCCC +
Preference number: 4 (lower is better)
Translates to: KLSGAGSHEGLVLRMAFKLVSFA*GRHLAP
Trigger: GGGAGCCAGATGACGACCCCATGCAAAGGAAACCAA...CTTAAAGGCCATCCTTAAAACCAGACCCTCATGGCTACCAGCACCTGAAAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374948.6
CDS-3UTR TCA 90 bp TCATGTCCAGTTAAACAGACCCTGGCAAACATCAGGCTCTTCCTCGAACAGAAAAGCCTTCCAGCTCCTTaGAGCAGAAGAAACACTGGG +
Preference number: 4 (lower is better)
Translates to: SCPVKQTLANIRLFLEQKSLPAP*SRRNTG
Trigger: CCCAGTGTTTCTTCTGCTTCAAGGAGCTGGAAGGCT...TTTCTGTTCGAGGAAGAGCCTGATGTTTGCCAGGGTCTGTTTAACTGGACATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000586192.5
ENST00000587746.5
ENST00000590925.6
ENST00000591800.1
ENST00000592734.5
CDS-3UTR TCA 90 bp GCAGCTCAGATTCAACAGGCACCTGCCAAGTCCACACTCAGGACTGTGACAGCCCAGCAGTGTTTGAAATaGCAGGCTTTTTATTTCTCA +
Preference number: 4 (lower is better)
Translates to: AAQIQQAPAKSTLRTVTAQQCLK*QAFYFS
Trigger: TGAGAAATAAAAAGCCTGTCATTTCAAACACTGCTG...GGCTGTCACAGTCCTGAGTGTGGACTTGGCAGGTGCCTGTTGAATCTGAGCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR TCA 90 bp GAGCCTTCCTCTTCATGTCCAGTTAAACAGACCCTGGCAAACATCAGGCTCTTCCTTCCAGTCCCTCCCTaGATCTGGCTTCCAATTTTT +
Preference number: 4 (lower is better)
Translates to: EPSSSCPVKQTLANIRLFLPVPP*IWLPIF
Trigger: AAAAATTGGAAGCCAGATTCAGGGAGGGACTGGAAG...GAAGAGCCTGATGTTTGCCAGGGTCTGTTTAACTGGACATGAAGAGGAAGGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586192.5
ENST00000587746.5
ENST00000590925.6
ENST00000591800.1
ENST00000592734.5
CDS-3UTR TCA 90 bp CCTCTTCATGTCCAGTTAAACAGACCCTGGCAAACATCAGGCTCTTCCTCGAACCTTCCAGTCCCTCCCTaGATCTGGCTTCCAATTTTT +
Preference number: 4 (lower is better)
Translates to: PLHVQLNRPWQTSGSSSNLPVPP*IWLPIF
Trigger: AAAAATTGGAAGCCAGATTCAGGGAGGGACTGGAAG...GTTCGAGGAAGAGCCTGATGTTTGCCAGGGTCTGTTTAACTGGACATGAAGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586192.5
ENST00000587746.5
ENST00000590925.6
ENST00000591800.1
ENST00000592734.5
CDS-3UTR TCA 90 bp CCTTCCTCTTCATGTCCAGTTAAACAGACCCTGGCAAACATCAGGCTCTTCCTCCTTCCAGTCCCTCCCTaGATCTGGCTTCCAATTTTT +
Preference number: 4 (lower is better)
Translates to: PSSSCPVKQTLANIRLFLLPVPP*IWLPIF
Trigger: AAAAATTGGAAGCCAGATTCAGGGAGGGACTGGAAG...GAGGAAGAGCCTGATGTTTGCCAGGGTCTGTTTAACTGGACATGAAGAGGAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586192.5
ENST00000587746.5
ENST00000590925.6
ENST00000591800.1
ENST00000592734.5
CDS-3UTR GCA 90 bp AATTGTGAGTTACTCTTTCCACATGGCGACAGCCTGCAATGGGGGCTCCAGTTTGGCAAAAGGAGTATCTaGCAGACGCTTCCTATCACT +
Preference number: 4 (lower is better)
Translates to: NCELLFPHGDSLQWGLQFGKRSI*QTLPIT
Trigger: AGTGATAGGAAGCGTCTGGCAGATACTCCTTTTGCC...AAACTGGAGCCCCCATTGCAGGCTGTCGCCATGTGGAAAGAGTAACTCACAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR GCA 90 bp CACTCCAACTTAGAGAACCTGAAAAATGGACATGTGGACATGTATCTGAAAGAACAGCCCTGCGGGAGCTaGTGCCTCCAAAGAAAGCGG +
Preference number: 4 (lower is better)
Translates to: HSNLENLKNGHVDMYLKEQPCGS*CLQRKR
Trigger: CCGCTTTCTTTGGAGGCAGCAGCTCCCGCAGGGCTG...TTCTTTCAGATACATGTCCACATGTCCATTTTTCAGGTTCTCTAAGTTGGAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR GCA 90 bp GAGCCTTCCTCTTCATGTCCAGTTAAACAGACCCTGGCAAACATCAGGCTCTTCGCGCAACCGGACGAATaGTTTTTATGTTCCTCTCGT +
Preference number: 4 (lower is better)
Translates to: EPSSSCPVKQTLANIRLFAQPDE*FLCSSR
Trigger: ACGAGAGGAACATAAAAAGCATTCGTCCGGTTGCGC...GAAGAGCCTGATGTTTGCCAGGGTCTGTTTAACTGGACATGAAGAGGAAGGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586192.5
CDS-3UTR CCA 90 bp TCTTCATGTCCAGTTAAACAGACCCTGGCAAACATCAGGCTCTTCCTCGAACAGAAGCAGAAGAAACACTaGGCCAAGTCTGGCTCGTTC +
Preference number: 4 (lower is better)
Translates to: SSCPVKQTLANIRLFLEQKQKKH*AKSGSF
Trigger: GAACGAGCCAGACTTGGCCCAGTGTTTCTTCTGCTT...CTGTTCGAGGAAGAGCCTGATGTTTGCCAGGGTCTGTTTAACTGGACATGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586192.5
ENST00000587746.5
ENST00000590925.6
ENST00000591800.1
ENST00000592734.5
CDS-3UTR CCA 90 bp CTTCATGTCCAGTTAAACAGACCCTGGCAAACATCAGGCTCTTCCTCGAACAGAAAGCAGAAGAAACACTaGGCCAAGTCTGGCTCGTTC +
Preference number: 4 (lower is better)
Translates to: LHVQLNRPWQTSGSSSNRKQKKH*AKSGSF
Trigger: GAACGAGCCAGACTTGGCCCAGTGTTTCTTCTGCTT...TCTGTTCGAGGAAGAGCCTGATGTTTGCCAGGGTCTGTTTAACTGGACATGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586192.5
ENST00000587746.5
ENST00000590925.6
ENST00000591800.1
ENST00000592734.5
CDS-3UTR CCA 90 bp CTCCAACTTAGAGAACCTGAAAAATGGACATGTGGACATGTATCTGAAAGAAAGCAGCCAGCTGCTCGATaGCACGGCGCACTTTCTCCG +
Preference number: 4 (lower is better)
Translates to: LQLREPEKWTCGHVSERKQPAAR*HGALSP
Trigger: CGGAGAAAGTGCGCCGTGCCATCGAGCAGCTGGCTG...CTTTCTTTCAGATACATGTCCACATGTCCATTTTTCAGGTTCTCTAAGTTGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CCA 90 bp GTTTGGCTTGCTGGTCTCTTCTGGGCAGCGGGCACTGCTGTCTCTACTTTCCAGAGAGAACCTGAAAAATaGACATGTGGACATGTATCT +
Preference number: 4 (lower is better)
Translates to: VWLAGLFWAAGTAVSTFQREPEK*TCGHVS
Trigger: AGATACATGTCCACATGTCCATTTTTCAGGTTCTCT...CTGGAAAGTAGAGACAGCAGTGCCCGCTGCCCAGAAGAGACCAGCAAGCCAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CCA 90 bp CAGAGCCTTCCTCTTCATGTCCAGTTAAACAGACCCTGGCAAACATCAGGCTCTCAGTTAAACAGACCCTaGCAAACATCAGGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: QSLPLHVQLNRPWQTSGSQLNRP*QTSGSS
Trigger: GGAAGAGCCTGATGTTTGCCAGGGTCTGTTTAACTG...AGAGCCTGATGTTTGCCAGGGTCTGTTTAACTGGACATGAAGAGGAAGGCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586192.5
ENST00000587746.5
ENST00000590925.6
ENST00000591800.1
ENST00000592734.5
3UTR CAA 72 bp GTGGCAGAAATAAGTGGGTCTGAAGTGCATTTTCAGTaGTTTCTGCCCGGAAGGAGCCCGGATGATACAAAC +
Preference number: 4 (lower is better)
Translates to: VAEISGSEVHFQ*FLPGRSPDDTN
Trigger: GTTTGTATCATCCGGGCTCCTTCCGGGCAGAAACAACTGAAAATGCACTTCAGACCCACTTATTTCTGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR TCA 90 bp CACTCCAACTTAGAGAACCTGAAAAATGGACATGTGGACATGTATCTGAAAGAAAGATGCGGTGGTCCTTaGGAAAGGGCTGCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: HSNLENLKNGHVDMYLKERCGGP*ERAARQ
Trigger: CTGCCTGGCAGCCCTTTCTCAAGGACCACCGCATCT...TTCTTTCAGATACATGTCCACATGTCCATTTTTCAGGTTCTCTAAGTTGGAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR TCA 90 bp TGTTTAAGAAGCAATGAGGGTGGAAAGCAACCCTCCCATACTAAGTGTCTTTGCAGCCTTCCAGCTCCTTaGAGCAGAAGAAACACTGGG +
Preference number: 4 (lower is better)
Translates to: CLRSNEGGKQPSHTKCLCSLPAP*SRRNTG
Trigger: CCCAGTGTTTCTTCTGCTTCAAGGAGCTGGAAGGCT...GCAAAGACACTTAGTATGGGAGGGTTGCTTTCCACCCTCATTGCTTCTTAAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590449.1
CDS-3UTR TCA 90 bp CTTCCTCTTCATGTCCAGTTAAACAGACCCTGGCAAACATCAGGCTCTTCCTCGCTTCAAACTGCTTCTTaGCAGAAAGGAAAGCGCAAC +
Preference number: 4 (lower is better)
Translates to: LPLHVQLNRPWQTSGSSSLQTAS*QKGKRN
Trigger: GTTGCGCTTTCCTTTCTGTCAAGAAGCAGTTTGAAG...CGAGGAAGAGCCTGATGTTTGCCAGGGTCTGTTTAACTGGACATGAAGAGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586192.5
ENST00000587746.5
ENST00000590925.6
ENST00000591800.1
CDS-3UTR TCA 90 bp TCCCAGTTTAGAGGGAAAAGTCTATCTCAGGCCGACTCAGATGTGGCAGAAATAACCCCGTTTCCCCAATaGCTTAGAATGGCTTTGTGC +
Preference number: 4 (lower is better)
Translates to: SQFRGKSLSQADSDVAEITPFPQ*LRMALC
Trigger: GCACAAAGCCATTCTAAGTCATTGGGGAAACGGGGT...TATTTCTGCCACATCTGAGTCGGCCTGAGATAGACTTTTCCCTCTAAACTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR TCA 90 bp GGCACAGGTGTGACAGATAAGGAACCTGCAGCTCAGATTCAACAGGCACCTGCCCAGCAGTGTTTGAAATaGCAGGCTTTTTATTTCTCA +
Preference number: 4 (lower is better)
Translates to: GTGVTDKEPAAQIQQAPAQQCLK*QAFYFS
Trigger: TGAGAAATAAAAAGCCTGTCATTTCAAACACTGCTG...GGCAGGTGCCTGTTGAATCTGAGCTGCAGGTTCCTTATCTGTCACACCTGTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR TCA 90 bp TCCATCATCTTACGCCAGACTTCAGCCCTGCGGGAGCTGCTGCCTCCAAAGAAAAGAAATAAGTGGGTCTaGAGTGCATTTTCAGTTGTT +
Preference number: 4 (lower is better)
Translates to: SIILRQTSALRELLPPKKRNKWV*SAFSVV
Trigger: AACAACTGAAAATGCACTTCAGACCCACTTATTTCT...TTTCTTTGGAGGCAGCAGCTCCCGCAGGGCTGAAGTCTGGCGTAAGATGATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR GCA 90 bp CAAAAGGAGTATCTGCCAGACGCTTCCTATCACTCTATTCTGTCTCCTCATCCATGTAACAATCCACCCTaGAGCTCTATGACAGGGAGG +
Preference number: 4 (lower is better)
Translates to: QKEYLPDASYHSILSPHPCNNPP*SSMTGR
Trigger: CCTCCCTGTCATAGAGCTGCAGGGTGGATTGTTACA...TGGATGAGGAGACAGAATAGAGTGATAGGAAGCGTCTGGCAGATACTCCTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CCA 90 bp CTCTCAATTTTGTTCTTGGCTCTTTCTCTGTCCAGTTTCAAAAATTCACCAAGGTTCTCAGTGGGGCAGTaGATGAAGCCAGCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: LSILFLALSLSSFKNSPRFSVGQ*MKPASA
Trigger: GGCCGAGGCTGGCTTCATCCACTGCCCCACTGAGAA...CCTTGGTGAATTTTTGAAACTGGACAGAGAAAGAGCCAAGAACAAAATTGAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000586192.5
ENST00000591800.1
CDS-3UTR CCA 90 bp TCAAAAATAAGCAGCTTAGATGAGTACAGAGGCTGGAGTGCATTTTCTGCTAACACACTGGGCCAAGTCTaGCTCGTTCTCAGTGGGGCA +
Preference number: 4 (lower is better)
Translates to: SKISSLDEYRGWSAFSANTLGQV*LVLSGA
Trigger: TGCCCCACTGAGAACGAGCCAGACTTGGCCCAGTGT...GTTAGCAGAAAATGCACTCCAGCCTCTGTACTCATCTAAGCTGCTTATTTTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CCA 90 bp TCATGTCCAGTTAAACAGACCCTGGCAAACATCAGGCTCTTCCTCGAACAGAAAAAGCAGAAGAAACACTaGGCCAAGTCTGGCTCGTTC +
Preference number: 4 (lower is better)
Translates to: SCPVKQTLANIRLFLEQKKQKKH*AKSGSF
Trigger: GAACGAGCCAGACTTGGCCCAGTGTTTCTTCTGCTT...TTTCTGTTCGAGGAAGAGCCTGATGTTTGCCAGGGTCTGTTTAACTGGACATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000586192.5
ENST00000587746.5
ENST00000590925.6
ENST00000591800.1
ENST00000592734.5
CDS-3UTR CCA 90 bp TCAAAAATAAGCAGCTTAGATGAGTACAGAGGCTGGAGTGCATTTTCTGCTAACAGAGGCCTCAATCCATaGCAGCCAGCTGCTCGATGG +
Preference number: 4 (lower is better)
Translates to: SKISSLDEYRGWSAFSANRGLNP*QPAARW
Trigger: CCATCGAGCAGCTGGCTGCCATGGATTGAGGCCTCT...GTTAGCAGAAAATGCACTCCAGCCTCTGTACTCATCTAAGCTGCTTATTTTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CCA 90 bp AAGCTTTCAGGTGCTGGTAGCCATGAGGGTCTGGTTTTAAGGATGGCCTTTAAGAGGCAGAAGCACCTCTaGTGCCACTTTCAAGACAAA +
Preference number: 4 (lower is better)
Translates to: KLSGAGSHEGLVLRMAFKRQKHL*CHFQDK
Trigger: TTTGTCTTGAAAGTGGCACCAGAGGTGCTTCTGCCT...CTTAAAGGCCATCCTTAAAACCAGACCCTCATGGCTACCAGCACCTGAAAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CCA 90 bp AAGTCATTTAAAAAGGATTTAGGCCACTGCCTTTTTCTGAGGGAGGAGCGGCCAATCCACATCACCGCCTaGCATGCAAAGGAGTTGAAG +
Preference number: 4 (lower is better)
Translates to: KSFKKDLGHCLFLREERPIHITA*HAKELK
Trigger: CTTCAACTCCTTTGCATGCCAGGCGGTGATGTGGAT...TGGCCGCTCCTCCCTCAGAAAAAGGCAGTGGCCTAAATCCTTTTTAAATGACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CCA 90 bp TCAAAAATAAGCAGCTTAGATGAGTACAGAGGCTGGAGTGCATTTTCTGCTAACCTCTACTTTCCAGGATaGCAGTTGGCCCGAGGGGCT +
Preference number: 4 (lower is better)
Translates to: SKISSLDEYRGWSAFSANLYFPG*QLARGA
Trigger: AGCCCCTCGGGCCAACTGCCATCCTGGAAAGTAGAG...GTTAGCAGAAAATGCACTCCAGCCTCTGTACTCATCTAAGCTGCTTATTTTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CCA 90 bp ATTGTTGGTTTCCTTTGCCTTTCTCCTGAAACTCCTGGAGGAAAGTCCAGAGCCCAGTTAAACAGACCCTaGCAAACATCAGGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: IVGFLCLSPETPGGKSRAQLNRP*QTSGSS
Trigger: GGAAGAGCCTGATGTTTGCCAGGGTCTGTTTAACTG...GGCTCTGGACTTTCCTCCAGGAGTTTCAGGAGAAAGGCAAAGGAAACCAACAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590925.6
CDS-3UTR CCA 90 bp AGAAAGGAAAGCGCAACCGGACGAATGCTTTTTATGTTCCTCTCTCGTGATCCGCAGTTAAACAGACCCTaGCAAACATCAGGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: RKESATGRMLFMFLSRDPQLNRP*QTSGSS
Trigger: GGAAGAGCCTGATGTTTGCCAGGGTCTGTTTAACTG...CGGATCACGAGAGAGGAACATAAAAAGCATTCGTCCGGTTGCGCTTTCCTTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591800.1
CDS-3UTR CCA 90 bp TATTCTGTTGAACATGAAAGGCATCAGGCATCTTACGTCCACCCCAAGGCATTTCAGAGAAGACTTACATaGGGTCGTCATCTGGCTCCC +
Preference number: 4 (lower is better)
Translates to: YSVEHERHQASYVHPKAFQRRLT*GRHLAP
Trigger: GGGAGCCAGATGACGACCCCATGTAAGTCTTCTCTG...AAATGCCTTGGGGTGGACGTAAGATGCCTGATGCCTTTCATGTTCAACAGAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590449.1
CDS-3UTR GCA 90 bp CTTCCTCTTCATGTCCAGTTAAACAGACCCTGGCAAACATCAGGCTCTTCCTCGGAACAGAAATTCTTTTaGTTCCAGTCCCTCCCTGAA +
Preference number: 4 (lower is better)
Translates to: LPLHVQLNRPWQTSGSSSEQKFF*FQSLPE
Trigger: TTCAGGGAGGGACTGGAAGCAAAAGAATTTCTGTTC...CGAGGAAGAGCCTGATGTTTGCCAGGGTCTGTTTAACTGGACATGAAGAGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000586192.5
ENST00000587746.5
ENST00000590925.6
ENST00000591800.1
ENST00000592734.5
CDS-3UTR GCA 90 bp AGCCTTCCTCTTCATGTCCAGTTAAACAGACCCTGGCAAACATCAGGCTCTTCCGAACAGAAATTCTTTTaGTTCCAGTCCCTCCCTGAA +
Preference number: 4 (lower is better)
Translates to: SLPLHVQLNRPWQTSGSSEQKFF*FQSLPE
Trigger: TTCAGGGAGGGACTGGAAGCAAAAGAATTTCTGTTC...GGAAGAGCCTGATGTTTGCCAGGGTCTGTTTAACTGGACATGAAGAGGAAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000586192.5
ENST00000587746.5
ENST00000590925.6
ENST00000591800.1
ENST00000592734.5
CDS-3UTR GCA 90 bp GAGCCTTCCTCTTCATGTCCAGTTAAACAGACCCTGGCAAACATCAGGCTCTTCGAACAGAAATTCTTTTaGTTCCAGTCCCTCCCTGAA +
Preference number: 4 (lower is better)
Translates to: EPSSSCPVKQTLANIRLFEQKFF*FQSLPE
Trigger: TTCAGGGAGGGACTGGAAGCAAAAGAATTTCTGTTC...GAAGAGCCTGATGTTTGCCAGGGTCTGTTTAACTGGACATGAAGAGGAAGGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000586192.5
ENST00000587746.5
ENST00000590925.6
ENST00000591800.1
ENST00000592734.5
CDS-3UTR CCA 90 bp AGCAATGAGGGTGGAAAGCAACCCTCCCATACTAAGTGTCTTTGCAACTCAAATAATGTAGAGATGCGGTaGTCCTTGAGAAAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: SNEGGKQPSHTKCLCNSNNVEMR*SLRKGC
Trigger: GCAGCCCTTTCTCAAGGACCACCGCATCTCTACATT...ATTTGAGTTGCAAAGACACTTAGTATGGGAGGGTTGCTTTCCACCCTCATTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590449.1
CDS-3UTR CCA 90 bp CTCAATTTTGTTCTTGGCTCTTTCTCTGTCCAGTTTCAAAAATTCACCAAGGGTACACTGGGCCAAGTCTaGCTCGTTCTCAGTGGGGCA +
Preference number: 4 (lower is better)
Translates to: LNFVLGSFSVQFQKFTKGTLGQV*LVLSGA
Trigger: TGCCCCACTGAGAACGAGCCAGACTTGGCCCAGTGT...ACCCTTGGTGAATTTTTGAAACTGGACAGAGAAAGAGCCAAGAACAAAATTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000586192.5
ENST00000591800.1
CDS-3UTR CCA 90 bp TATTCTGTTGAACATGAAAGGCATCAGGCATCTTACGTCCACCCCAAGGCATTTAAGCAGAAGAAACACTaGGCCAAGTCTGGCTCGTTC +
Preference number: 4 (lower is better)
Translates to: YSVEHERHQASYVHPKAFKQKKH*AKSGSF
Trigger: GAACGAGCCAGACTTGGCCCAGTGTTTCTTCTGCTT...AAATGCCTTGGGGTGGACGTAAGATGCCTGATGCCTTTCATGTTCAACAGAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590449.1
CDS-3UTR CCA 90 bp CTCCAACTTAGAGAACCTGAAAAATGGACATGTGGACATGTATCTGAAAGAAAGGGCCCACAGGAAGGCTaGTGGCACCAGGGAATAAAC +
Preference number: 4 (lower is better)
Translates to: LQLREPEKWTCGHVSERKGPQEG*WHQGIN
Trigger: GTTTATTCCCTGGTGCCACCAGCCTTCCTGTGGGCC...CTTTCTTTCAGATACATGTCCACATGTCCATTTTTCAGGTTCTCTAAGTTGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CCA 90 bp CATGTCCAGTTAAACAGACCCTGGCAAACATCAGGCTCTTCCTCGAACAGAAATCAGTTAAACAGACCCTaGCAAACATCAGGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: HVQLNRPWQTSGSSSNRNQLNRP*QTSGSS
Trigger: GGAAGAGCCTGATGTTTGCCAGGGTCTGTTTAACTG...ATTTCTGTTCGAGGAAGAGCCTGATGTTTGCCAGGGTCTGTTTAACTGGACATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586192.5
ENST00000587746.5
ENST00000590925.6
ENST00000591800.1
ENST00000592734.5
CDS-3UTR CCA 90 bp TGTTTAAGAAGCAATGAGGGTGGAAAGCAACCCTCCCATACTAAGTGTCTTTGCAAAGCCCATCGAGGCTaGCCAGAGAAGACTTACATG +
Preference number: 4 (lower is better)
Translates to: CLRSNEGGKQPSHTKCLCKAHRG*PEKTYM
Trigger: CATGTAAGTCTTCTCTGGCCAGCCTCGATGGGCTTT...GCAAAGACACTTAGTATGGGAGGGTTGCTTTCCACCCTCATTGCTTCTTAAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590449.1
CDS-3UTR TCA 90 bp TGTCCAGTTAAACAGACCCTGGCAAACATCAGGCTCTTCCTCGAACAGAAATTCCTTCAAACTGCTTCTTaGCAGAAAGGAAAGCGCAAC +
Preference number: 4 (lower is better)
Translates to: CPVKQTLANIRLFLEQKFLQTAS*QKGKRN
Trigger: GTTGCGCTTTCCTTTCTGTCAAGAAGCAGTTTGAAG...GAATTTCTGTTCGAGGAAGAGCCTGATGTTTGCCAGGGTCTGTTTAACTGGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586192.5
ENST00000587746.5
ENST00000590925.6
ENST00000591800.1
CDS-3UTR TCA 90 bp TTTCTGCTAACAAAAACCACTGTGATATTCTCCCAGTTTAGAGGGAAAAGTCTAGTCTCCTCATCCACCTaGAGTTCACCCCGTTTCCCC +
Preference number: 4 (lower is better)
Translates to: FLLTKTTVIFSQFRGKSLVSSST*SSPRFP
Trigger: GGGGAAACGGGGTGAACTTCAGGTGGATGAGGAGAC...TAGACTTTTCCCTCTAAACTGGGAGAATATCACAGTGGTTTTTGTTAGCAGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR GCA 90 bp TGCTTCTTGACAGAAAGGAAAGCGCAACCGGACGAATGCTTTTTATGTTCCTCTGCGCAACCGGACGAATaGTTTTTATGTTCCTCTCTC +
Preference number: 4 (lower is better)
Translates to: CFLTERKAQPDECFLCSSAQPDE*FLCSSL
Trigger: GAGAGAGGAACATAAAAAGCATTCGTCCGGTTGCGC...AGAGGAACATAAAAAGCATTCGTCCGGTTGCGCTTTCCTTTCTGTCAAGAAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000591800.1
CDS-3UTR GCA 90 bp CAAAAGGAGTATCTGCCAGACGCTTCCTATCACTCTATTCTGTCTCCTCATCCACAGAAGCACCTCTGGTaGCACTTTCAAGACAAAACA +
Preference number: 4 (lower is better)
Translates to: QKEYLPDASYHSILSPHPQKHLW*HFQDKT
Trigger: TGTTTTGTCTTGAAAGTGGCACCAGAGGTGCTTCTG...TGGATGAGGAGACAGAATAGAGTGATAGGAAGCGTCTGGCAGATACTCCTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR GCA 90 bp TTTCTGCTAACAAAAACCACTGTGATATTCTCCCAGTTTAGAGGGAAAAGTCTACTGGGCAGCGGGCACTaGTGTCTCTACTTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: FLLTKTTVIFSQFRGKSLLGSGH*CLYFPG
Trigger: TCCTGGAAAGTAGAGACAGCAGTGCCCGCTGCCCAG...TAGACTTTTCCCTCTAAACTGGGAGAATATCACAGTGGTTTTTGTTAGCAGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR GCA 90 bp TCCCAGTTTAGAGGGAAAAGTCTATCTCAGGCCGACTCAGATGTGGCAGAAATAGCGCAACCGGACGAATaGTTTTTATGTTCCTCTATG +
Preference number: 4 (lower is better)
Translates to: SQFRGKSLSQADSDVAEIAQPDE*FLCSSM
Trigger: CATAGAGGAACATAAAAAGCATTCGTCCGGTTGCGC...TATTTCTGCCACATCTGAGTCGGCCTGAGATAGACTTTTCCCTCTAAACTGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000350051.8
CDS-3UTR GCA 90 bp TGTCCAGTTAAACAGACCCTGGCAAACATCAGGCTCTTCCTCGAACAGAAATTCGCGCAACCGGACGAATaGTTTTTATGTTCCTCTATG +
Preference number: 4 (lower is better)
Translates to: CPVKQTLANIRLFLEQKFAQPDE*FLCSSM
Trigger: CATAGAGGAACATAAAAAGCATTCGTCCGGTTGCGC...GAATTTCTGTTCGAGGAAGAGCCTGATGTTTGCCAGGGTCTGTTTAACTGGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590925.6
CDS-3UTR GCA 90 bp TCCTCTTCATGTCCAGTTAAACAGACCCTGGCAAACATCAGGCTCTTCCTCGAAGAACAGAAATTCTTTTaGTTCCAGTCCCTCCCTGAA +
Preference number: 4 (lower is better)
Translates to: SSSCPVKQTLANIRLFLEEQKFF*FQSLPE
Trigger: TTCAGGGAGGGACTGGAAGCAAAAGAATTTCTGTTC...TTCGAGGAAGAGCCTGATGTTTGCCAGGGTCTGTTTAACTGGACATGAAGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000586192.5
ENST00000587746.5
ENST00000590925.6
ENST00000591800.1
ENST00000592734.5
CDS-3UTR GCA 90 bp CAGAGCCTTCCTCTTCATGTCCAGTTAAACAGACCCTGGCAAACATCAGGCTCTATTGTTGGTTTCCTTTaGCTTTCTCCTGAAACTCCT +
Preference number: 4 (lower is better)
Translates to: QSLPLHVQLNRPWQTSGSIVGFL*LSPETP
Trigger: AGGAGTTTCAGGAGAAAGGCAAAGGAAACCAACAAT...AGAGCCTGATGTTTGCCAGGGTCTGTTTAACTGGACATGAAGAGGAAGGCTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590925.6
CDS-3UTR CCA 90 bp TCTTCAAACTGCTTCTTGACAGAAAGGAAAGCGCAACCGGACGAATGCTTTTTAAAGCAGAAGAAACACTaGGCCAAGTCTGGCTCGTTC +
Preference number: 4 (lower is better)
Translates to: SSNCFLTERKAQPDECFLKQKKH*AKSGSF
Trigger: GAACGAGCCAGACTTGGCCCAGTGTTTCTTCTGCTT...TAAAAAGCATTCGTCCGGTTGCGCTTTCCTTTCTGTCAAGAAGCAGTTTGAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586192.5
ENST00000591800.1
CDS-3UTR CCA 90 bp TCAAAAATAAGCAGCTTAGATGAGTACAGAGGCTGGAGTGCATTTTCTGCTAACAATAAACCCTGGAAGTaGTGCAGCCACTCTGGGACC +
Preference number: 4 (lower is better)
Translates to: SKISSLDEYRGWSAFSANNKPWK*CSHSGT
Trigger: GGTCCCAGAGTGGCTGCACCACTTCCAGGGTTTATT...GTTAGCAGAAAATGCACTCCAGCCTCTGTACTCATCTAAGCTGCTTATTTTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CCA 90 bp CTCCAACTTAGAGAACCTGAAAAATGGACATGTGGACATGTATCTGAAAGAAAGGACAGATGTGAAGGTTaGGCTGACAGACACACGGCC +
Preference number: 4 (lower is better)
Translates to: LQLREPEKWTCGHVSERKDRCEG*ADRHTA
Trigger: GGCCGTGTGTCTGTCAGCCCAACCTTCACATCTGTC...CTTTCTTTCAGATACATGTCCACATGTCCATTTTTCAGGTTCTCTAAGTTGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CCA 90 bp TTATTGTTGGTTTCCTTTGCCTTTCTCCTGAAACTCCTGGAGGAAAGTCCAGAGTTTTATGTTCCTCTATaGGGTCGTCATCTGGCTCCC +
Preference number: 4 (lower is better)
Translates to: LLLVSFAFLLKLLEESPEFYVPL*GRHLAP
Trigger: GGGAGCCAGATGACGACCCCATAGAGGAACATAAAA...CTCTGGACTTTCCTCCAGGAGTTTCAGGAGAAAGGCAAAGGAAACCAACAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590925.6
CDS-3UTR GCA 90 bp TGTCCAGTTAAACAGACCCTGGCAAACATCAGGCTCTTCCTCGAACAGAAATTCGAACAGAAATTCTTTTaGTTCCAGTCCCTCCCTGAA +
Preference number: 4 (lower is better)
Translates to: CPVKQTLANIRLFLEQKFEQKFF*FQSLPE
Trigger: TTCAGGGAGGGACTGGAAGCAAAAGAATTTCTGTTC...GAATTTCTGTTCGAGGAAGAGCCTGATGTTTGCCAGGGTCTGTTTAACTGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000586192.5
ENST00000587746.5
ENST00000590925.6
ENST00000591800.1
ENST00000592734.5
CDS-3UTR CCA 90 bp GCACAGGCAGAAGCACCTCTGGTGCCACTTTCAAGACAAAACAAGAGCACAGTTAGAGAACCTGAAAAATaGACATGTGGACATGTATCT +
Preference number: 4 (lower is better)
Translates to: AQAEAPLVPLSRQNKSTVREPEK*TCGHVS
Trigger: AGATACATGTCCACATGTCCATTTTTCAGGTTCTCT...AACTGTGCTCTTGTTTTGTCTTGAAAGTGGCACCAGAGGTGCTTCTGCCTGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CCA 90 bp AAACTGCTTCTTGACAGAAAGGAAAGCGCAACCGGACGAATGCTTTTTATGTTCCAGTTAAACAGACCCTaGCAAACATCAGGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: KLLLDRKESATGRMLFMFQLNRP*QTSGSS
Trigger: GGAAGAGCCTGATGTTTGCCAGGGTCTGTTTAACTG...GAACATAAAAAGCATTCGTCCGGTTGCGCTTTCCTTTCTGTCAAGAAGCAGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586192.5
ENST00000591800.1
CDS-3UTR TCA 90 bp AAGCTTTCAGGTGCTGGTAGCCATGAGGGTCTGGTTTTAAGGATGGCCTTTAAGAGAAATAAGTGGGTCTaGAGTGCATTTTCAGTTGTT +
Preference number: 4 (lower is better)
Translates to: KLSGAGSHEGLVLRMAFKRNKWV*SAFSVV
Trigger: AACAACTGAAAATGCACTTCAGACCCACTTATTTCT...CTTAAAGGCCATCCTTAAAACCAGACCCTCATGGCTACCAGCACCTGAAAGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR TCA 90 bp TGTTTAAGAAGCAATGAGGGTGGAAAGCAACCCTCCCATACTAAGTGTCTTTGCAACAACAGGGTCTGCTaGTGTATTCTGTTGAACATG +
Preference number: 4 (lower is better)
Translates to: CLRSNEGGKQPSHTKCLCNNRVC*CILLNM
Trigger: CATGTTCAACAGAATACATCAGCAGACCCTGTTGTT...GCAAAGACACTTAGTATGGGAGGGTTGCTTTCCACCCTCATTGCTTCTTAAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590449.1
CDS-3UTR CCA 90 bp TTTCTGCTAACAAAAACCACTGTGATATTCTCCCAGTTTAGAGGGAAAAGTCTAGCTCTAACCTGCCATTaGAACCTCACCCATAGCCCA +
Preference number: 4 (lower is better)
Translates to: FLLTKTTVIFSQFRGKSLALTCH*NLTHSP
Trigger: TGGGCTATGGGTGAGGTTCCAATGGCAGGTTAGAGC...TAGACTTTTCCCTCTAAACTGGGAGAATATCACAGTGGTTTTTGTTAGCAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR TCA 90 bp CTCCAACTTAGAGAACCTGAAAAATGGACATGTGGACATGTATCTGAAAGAAAGCTTCAAACTGCTTCTTaGCAGAAAGGAAAGCGCAAC +
Preference number: 4 (lower is better)
Translates to: LQLREPEKWTCGHVSERKLQTAS*QKGKRN
Trigger: GTTGCGCTTTCCTTTCTGTCAAGAAGCAGTTTGAAG...CTTTCTTTCAGATACATGTCCACATGTCCATTTTTCAGGTTCTCTAAGTTGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301633.8
ENST00000350051.8
CDS-3UTR TCA 90 bp CTCTCAATTTTGTTCTTGGCTCTTTCTCTGTCCAGTTTCAAAAATTCACCAAGGCTTCAAACTGCTTCTTaGCAGAAAGGAAAGCGCAAC +
Preference number: 4 (lower is better)
Translates to: LSILFLALSLSSFKNSPRLQTAS*QKGKRN
Trigger: GTTGCGCTTTCCTTTCTGTCAAGAAGCAGTTTGAAG...CCTTGGTGAATTTTTGAAACTGGACAGAGAAAGAGCCAAGAACAAAATTGAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586192.5
ENST00000591800.1
CDS-3UTR TCA 90 bp CAATTTTGTTCTTGGCTCTTTCTCTGTCCAGTTTCAAAAATTCACCAAGGGTTACTTCCAGTCCCTCCCTaGATCTGGCTTCCAATTTTT +
Preference number: 4 (lower is better)
Translates to: QFCSWLFLCPVSKIHQGLLPVPP*IWLPIF
Trigger: AAAAATTGGAAGCCAGATTCAGGGAGGGACTGGAAG...TAACCCTTGGTGAATTTTTGAAACTGGACAGAGAAAGAGCCAAGAACAAAATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586192.5
ENST00000591800.1
CDS-3UTR TCA 90 bp TCAATTTTGTTCTTGGCTCTTTCTCTGTCCAGTTTCAAAAATTCACCAAGGGTTCTTCAAACTGCTTCTTaGCAGAAAGGAAAGCGCAAC +
Preference number: 4 (lower is better)
Translates to: SILFLALSLSSFKNSPRVLQTAS*QKGKRN
Trigger: GTTGCGCTTTCCTTTCTGTCAAGAAGCAGTTTGAAG...AACCCTTGGTGAATTTTTGAAACTGGACAGAGAAAGAGCCAAGAACAAAATTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586192.5
ENST00000591800.1
CDS CCA 90 bp ATGCCGCCGCCGCCACCTCTGCCAACGGGTCCCGCGATTCAAATCTaGCGGTTAATGGCGCGCCGCGGGGCATGTCGGGAGCGCACGCCC +
Preference number: 5 (lower is better)
Translates to: MPPPPPLPTGPAIQI*RLMARRGACRERTP
Trigger: GGGCGTGCGCTCCCGACATGCCCCGCGGCGCGCCATTAACCGCCAGATTTGAATCGCGGGACCCGTTGGCAGAGGTGGCGGCGGCGGCAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301633.8
CDS GCA 90 bp GGCCAGTTCTTGAATGTAGAGATGCGGTGGTCCTTGAGAAAGGGCTaGCAGGCAGGGGGCAACGTCGGGGCACCCATGCCGCCGCCGCCA +
Preference number: 5 (lower is better)
Translates to: GQFLNVEMRWSLRKG*QAGGNVGAPMPPPP
Trigger: TGGCGGCGGCGGCATGGGTGCCCCGACGTTGCCCCCTGCCTGGCAGCCCTTTCTCAAGGACCACCGCATCTCTACATTCAAGAACTGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
ENST00000590449.1
ENST00000590925.6
CDS-3UTR CAA 90 bp GGAGCTGCTGCCTCCAAAGAAAGCGGGGACCTGGGCGGACTGCGTCTCTCCCCCTTTCCAGGATGGCAGTaGGCCCGAGGGGCTCTAACC +
Preference number: 5 (lower is better)
Translates to: GAAASKESGDLGGLRLSPFPGWQ*ARGALT
Trigger: GGTTAGAGCCCCTCGGGCCAACTGCCATCCTGGAAA...GGGGGAGAGACGCAGTCCGCCCAGGTCCCCGCTTTCTTTGGAGGCAGCAGCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS CCA 90 bp CAGAAGAAACACTGGGCCAAGTCTGGCTCGTTCTCAGTGGGGCAGTaGATGAAGCCAGCCTCGGCCATCCGCTCCGGGGTGCAGGCGCAG +
Preference number: 5 (lower is better)
Translates to: QKKHWAKSGSFSVGQ*MKPASAIRSGVQAQ
Trigger: CTGCGCCTGCACCCCGGAGCGGATGGCCGAGGCTGGCTTCATCCACTGCCCCACTGAGAACGAGCCAGACTTGGCCCAGTGTTTCTTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
ENST00000586192.5
ENST00000587746.5
ENST00000590449.1
ENST00000590925.6
ENST00000591800.1
ENST00000592115.5
ENST00000592734.5
CDS GCA 90 bp GGACCAGGCAGCTCCGGCCAGAGGCCTCAATCCATGGCAGCCAGCTaGTCGATGGCACGGCGCACTTTCTCCGCAGTTTCCTCAAATTCT +
Preference number: 5 (lower is better)
Translates to: GPGSSGQRPQSMAAS*SMARRTFSAVSSNS
Trigger: AGAATTTGAGGAAACTGCGGAGAAAGTGCGCCGTGCCATCGAGCAGCTGGCTGCCATGGATTGAGGCCTCTGGCCGGAGCTGCCTGGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
ENST00000589892.1
CDS-3UTR CAA 90 bp TCCAGGATGGCAGTTGGCCCGAGGGGCTCTAACCTGCCATTGGAACCTCACCCAGAGATGCGGTGGTCCTaGAGAAAGGGCTGCCAGGCA +
Preference number: 5 (lower is better)
Translates to: SRMAVGPRGSNLPLEPHPEMRWS*RKGCQA
Trigger: TGCCTGGCAGCCCTTTCTCAAGGACCACCGCATCTC...TGGGTGAGGTTCCAATGGCAGGTTAGAGCCCCTCGGGCCAACTGCCATCCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CAA 90 bp CAGACTTCAGCCCTGCGGGAGCTGCTGCCTCCAAAGAAAGCGGGGACCTGGGCGCAGCCTTCCAGCTCCTaGAAGCAGAAGAAACACTGG +
Preference number: 5 (lower is better)
Translates to: QTSALRELLPPKKAGTWAQPSSS*KQKKHW
Trigger: CCAGTGTTTCTTCTGCTTCAAGGAGCTGGAAGGCTG...CGCCCAGGTCCCCGCTTTCTTTGGAGGCAGCAGCTCCCGCAGGGCTGAAGTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CAA 90 bp AGACTTCAGCCCTGCGGGAGCTGCTGCCTCCAAAGAAAGCGGGGACCTGGGCGGCAGCCTTCCAGCTCCTaGAAGCAGAAGAAACACTGG +
Preference number: 5 (lower is better)
Translates to: RLQPCGSCCLQRKRGPGRQPSSS*KQKKHW
Trigger: CCAGTGTTTCTTCTGCTTCAAGGAGCTGGAAGGCTG...CCGCCCAGGTCCCCGCTTTCTTTGGAGGCAGCAGCTCCCGCAGGGCTGAAGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CAA 90 bp AGACTTCAGCCCTGCGGGAGCTGCTGCCTCCAAAGAAAGCGGGGACCTGGGCGGGAAGTGCATTTTCAGTaGTTTCTGCCCGGAAGGAGC +
Preference number: 5 (lower is better)
Translates to: RLQPCGSCCLQRKRGPGREVHFQ*FLPGRS
Trigger: GCTCCTTCCGGGCAGAAACAACTGAAAATGCACTTC...CCGCCCAGGTCCCCGCTTTCTTTGGAGGCAGCAGCTCCCGCAGGGCTGAAGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CAA 90 bp CGCCAGACTTCAGCCCTGCGGGAGCTGCTGCCTCCAAAGAAAGCGGGGACCTGGAGAAAGTCTAGGCGGTaGCACTTAGACAAGGGCCTA +
Preference number: 5 (lower is better)
Translates to: RQTSALRELLPPKKAGTWRKSRR*HLDKGL
Trigger: TAGGCCCTTGTCTAAGTGCAACCGCCTAGACTTTCT...CCAGGTCCCCGCTTTCTTTGGAGGCAGCAGCTCCCGCAGGGCTGAAGTCTGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS CCA 90 bp CCAGCCTTCCAGCTCCTTGAAGCAGAAGAAACACTGGGCCAAGTCTaGCTCGTTCTCAGTGGGGCAGTGGATGAAGCCAGCCTCGGCCAT +
Preference number: 5 (lower is better)
Translates to: PAFQLLEAEETLGQV*LVLSGAVDEASLGH
Trigger: ATGGCCGAGGCTGGCTTCATCCACTGCCCCACTGAGAACGAGCCAGACTTGGCCCAGTGTTTCTTCTGCTTCAAGGAGCTGGAAGGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
ENST00000586192.5
ENST00000587746.5
ENST00000590449.1
ENST00000590925.6
ENST00000591800.1
ENST00000592115.5
ENST00000592734.5
CDS-3UTR CAA 90 bp GCAGCTCAGATTCAACAGGCACCTGCCAAGTCCACACTCAGGACTGTGACAGCCTTTCCAGGATGGCAGTaGGCCCGAGGGGCTCTAACC +
Preference number: 5 (lower is better)
Translates to: AAQIQQAPAKSTLRTVTAFPGWQ*ARGALT
Trigger: GGTTAGAGCCCCTCGGGCCAACTGCCATCCTGGAAA...GGCTGTCACAGTCCTGAGTGTGGACTTGGCAGGTGCCTGTTGAATCTGAGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS CCA 90 bp GCAGCTCCGGCCAGAGGCCTCAATCCATGGCAGCCAGCTGCTCGATaGCACGGCGCACTTTCTCCGCAGTTTCCTCAAATTCTTTCTTCT +
Preference number: 5 (lower is better)
Translates to: AAPARGLNPWQPAAR*HGALSPQFPQILSS
Trigger: AGAAGAAAGAATTTGAGGAAACTGCGGAGAAAGTGCGCCGTGCCATCGAGCAGCTGGCTGCCATGGATTGAGGCCTCTGGCCGGAGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
ENST00000589892.1
CDS CCA 90 bp AGCCCATCGAGGCTGGCCAGAGAAGACTTACATGGGGTCGTCATCTaGCTCCCAGCCTTCCAGCTCCTTGAAGCAGAAGAAACACTGGGC +
Preference number: 5 (lower is better)
Translates to: SPSRLAREDLHGVVI*LPAFQLLEAEETLG
Trigger: GCCCAGTGTTTCTTCTGCTTCAAGGAGCTGGAAGGCTGGGAGCCAGATGACGACCCCATGTAAGTCTTCTCTGGCCAGCCTCGATGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590449.1
CDS-3UTR CAA 90 bp ACAGCCGAGATGACCTCCAGAGGTTTCCAGCGAAGCTGTAACAATCCACCCTGCGAGATGCGGTGGTCCTaGAGAAAGGGCTGCCAGGCA +
Preference number: 5 (lower is better)
Translates to: TAEMTSRGFQRSCNNPPCEMRWS*RKGCQA
Trigger: TGCCTGGCAGCCCTTTCTCAAGGACCACCGCATCTC...GCAGGGTGGATTGTTACAGCTTCGCTGGAAACCTCTGGAGGTCATCTCGGCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CAA 90 bp ATTTTCAGTTGTTTCTGCCCGGAAGGAGCCCGGATGATACAAACAGGTCTGGGGTTTCCAGGATGGCAGTaGGCCCGAGGGGCTCTAACC +
Preference number: 5 (lower is better)
Translates to: IFSCFCPEGARMIQTGLGFPGWQ*ARGALT
Trigger: GGTTAGAGCCCCTCGGGCCAACTGCCATCCTGGAAA...CCCCAGACCTGTTTGTATCATCCGGGCTCCTTCCGGGCAGAAACAACTGAAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CAA 90 bp TGCAGCTCAGATTCAACAGGCACCTGCCAAGTCCACACTCAGGACTGTGACAGCCAGCCTTCCAGCTCCTaGAAGCAGAAGAAACACTGG +
Preference number: 5 (lower is better)
Translates to: CSSDSTGTCQVHTQDCDSQPSSS*KQKKHW
Trigger: CCAGTGTTTCTTCTGCTTCAAGGAGCTGGAAGGCTG...GCTGTCACAGTCCTGAGTGTGGACTTGGCAGGTGCCTGTTGAATCTGAGCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CAA 90 bp TCTTCATGTCCAGTTAAACAGACCCTGGCAAACATCAGGCTCTTCCTCGAACAGGAGATGCGGTGGTCCTaGAGAAAGGGCTGCCAGGCA +
Preference number: 5 (lower is better)
Translates to: SSCPVKQTLANIRLFLEQEMRWS*RKGCQA
Trigger: TGCCTGGCAGCCCTTTCTCAAGGACCACCGCATCTC...CTGTTCGAGGAAGAGCCTGATGTTTGCCAGGGTCTGTTTAACTGGACATGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590925.6
ENST00000592734.5
CDS-3UTR CAA 90 bp GGCAAGCGCCCAGAGACAACTGCGTCTCTGCCAGGACGCTCATCCTCACTGCGGTATTGTTGGTTTCCTTaGCAATTTTGTTCTTGGCTC +
Preference number: 5 (lower is better)
Translates to: GKRPETTASLPGRSSSLRYCWFP*QFCSWL
Trigger: GAGCCAAGAACAAAATTGCAAAGGAAACCAACAATA...CCGCAGTGAGGATGAGCGTCCTGGCAGAGACGCAGTTGTCTCTGGGCGCTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301633.8
ENST00000350051.8
CDS-3UTR CAA 90 bp CATGAGGTCCAGACACATTCACTGTGGAAGGCTCTGCCCACGCGAACAAAGCTGAGAAAGTCTAGGCGGTaGCACTTAGACAAGGGCCTA +
Preference number: 5 (lower is better)
Translates to: HEVQTHSLWKALPTRTKLRKSRR*HLDKGL
Trigger: TAGGCCCTTGTCTAAGTGCAACCGCCTAGACTTTCT...CAGCTTTGTTCGCGTGGGCAGAGCCTTCCACAGTGAATGTGTCTGGACCTCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CAA 90 bp ATGACAGGGAGGAGGGCGAATCAAATCCATCATCTTACGCCAGACTTCAGCCCTAATGGGGGCTCCAGTTaGGCTTGCTGGTCTCTTCTG +
Preference number: 5 (lower is better)
Translates to: MTGRRANQIHHLTPDFSPNGGSS*ACWSLL
Trigger: CAGAAGAGACCAGCAAGCCAAACTGGAGCCCCCATT...AGGGCTGAAGTCTGGCGTAAGATGATGGATTTGATTCGCCCTCCTCCCTGTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CAA 90 bp ACTGCGGCTGTCTGGGCAGATGGCTGTTGGCAGGCTAGGGACGACGATGAAAAATATTGTTGGTTTCCTTaGCATGGGGTCGTCATCTGG +
Preference number: 5 (lower is better)
Translates to: TAAVWADGCWQARDDDEKYCWFP*HGVVIW
Trigger: CCAGATGACGACCCCATGCAAAGGAAACCAACAATA...TTTTTCATCGTCGTCCCTAGCCTGCCAACAGCCATCTGCCCAGACAGCCGCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374948.6
CDS-3UTR CAA 90 bp CACAACCCTTCCCAGACTCCACTCCAACTTAGAGAACCTGAAAAATGGACATGTGAGATGCGGTGGTCCTaGAGAAAGGGCTGCCAGGCA +
Preference number: 5 (lower is better)
Translates to: HNPSQTPLQLREPEKWTCEMRWS*RKGCQA
Trigger: TGCCTGGCAGCCCTTTCTCAAGGACCACCGCATCTC...ACATGTCCATTTTTCAGGTTCTCTAAGTTGGAGTGGAGTCTGGGAAGGGTTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CAA 90 bp CCACTGTTACCAGCAGCACCCGCTGCACAGGCAGAAGCACCTCTGGTGCCACTTCCACATGAGACTTTATaGGCAATTGTGAGTTACTCT +
Preference number: 5 (lower is better)
Translates to: PLLPAAPAAQAEAPLVPLPHETL*AIVSYS
Trigger: AGAGTAACTCACAATTGCCAATAAAGTCTCATGTGG...AAGTGGCACCAGAGGTGCTTCTGCCTGTGCAGCGGGTGCTGCTGGTAACAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CAA 90 bp GCATATAGAGAGGTATCCGTTCACAACAGCTGTTTAAGAAGCAATGAGGGTGGAGAGATGCGGTGGTCCTaGAGAAAGGGCTGCCAGGCA +
Preference number: 5 (lower is better)
Translates to: AYREVSVHNSCLRSNEGGEMRWS*RKGCQA
Trigger: TGCCTGGCAGCCCTTTCTCAAGGACCACCGCATCTC...TCCACCCTCATTGCTTCTTAAACAGCTGTTGTGAACGGATACCTCTCTATATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590449.1
CDS-3UTR CAA 90 bp CTTCCTCTTCATGTCCAGTTAAACAGACCCTGGCAAACATCAGGCTCTTCCTCGCAGCCTTCCAGCTCCTaGAAGCAGAAGAAACACTGG +
Preference number: 5 (lower is better)
Translates to: LPLHVQLNRPWQTSGSSSQPSSS*KQKKHW
Trigger: CCAGTGTTTCTTCTGCTTCAAGGAGCTGGAAGGCTG...CGAGGAAGAGCCTGATGTTTGCCAGGGTCTGTTTAACTGGACATGAAGAGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586192.5
ENST00000587746.5
ENST00000590925.6
ENST00000591800.1
ENST00000592734.5
CDS-3UTR CAA 90 bp AGCCTTCCTCTTCATGTCCAGTTAAACAGACCCTGGCAAACATCAGGCTCTTCCCAGCCTTCCAGCTCCTaGAAGCAGAAGAAACACTGG +
Preference number: 5 (lower is better)
Translates to: SLPLHVQLNRPWQTSGSSQPSSS*KQKKHW
Trigger: CCAGTGTTTCTTCTGCTTCAAGGAGCTGGAAGGCTG...GGAAGAGCCTGATGTTTGCCAGGGTCTGTTTAACTGGACATGAAGAGGAAGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586192.5
ENST00000587746.5
ENST00000590925.6
ENST00000591800.1
ENST00000592734.5
CDS-3UTR CAA 90 bp CCTTCCTCTTCATGTCCAGTTAAACAGACCCTGGCAAACATCAGGCTCTTCCTCCAGCCTTCCAGCTCCTaGAAGCAGAAGAAACACTGG +
Preference number: 5 (lower is better)
Translates to: PSSSCPVKQTLANIRLFLQPSSS*KQKKHW
Trigger: CCAGTGTTTCTTCTGCTTCAAGGAGCTGGAAGGCTG...GAGGAAGAGCCTGATGTTTGCCAGGGTCTGTTTAACTGGACATGAAGAGGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586192.5
ENST00000587746.5
ENST00000590925.6
ENST00000591800.1
ENST00000592734.5
CDS-3UTR CAA 90 bp GGATGGCAGTTGGCCCGAGGGGCTCTAACCTGCCATTGGAACCTCACCCATAGCTATTGTTGGTTTCCTTaGCAATTTTGTTCTTGGCTC +
Preference number: 5 (lower is better)
Translates to: GWQLARGALTCHWNLTHSYCWFP*QFCSWL
Trigger: GAGCCAAGAACAAAATTGCAAAGGAAACCAACAATA...GCTATGGGTGAGGTTCCAATGGCAGGTTAGAGCCCCTCGGGCCAACTGCCATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301633.8
ENST00000350051.8
CDS-3UTR CAA 90 bp ATTTTCAGTTGTTTCTGCCCGGAAGGAGCCCGGATGATACAAACAGGTCTGGGGGAAGTGCATTTTCAGTaGTTTCTGCCCGGAAGGAGC +
Preference number: 5 (lower is better)
Translates to: IFSCFCPEGARMIQTGLGEVHFQ*FLPGRS
Trigger: GCTCCTTCCGGGCAGAAACAACTGAAAATGCACTTC...CCCCAGACCTGTTTGTATCATCCGGGCTCCTTCCGGGCAGAAACAACTGAAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CAA 90 bp TTTTTATTTCTCAGGAACAGCCGAGATGACCTCCAGAGGTTTCCAGCGAAGCTGAATGGGGGCTCCAGTTaGGCTTGCTGGTCTCTTCTG +
Preference number: 5 (lower is better)
Translates to: FLFLRNSRDDLQRFPAKLNGGSS*ACWSLL
Trigger: CAGAAGAGACCAGCAAGCCAAACTGGAGCCCCCATT...CAGCTTCGCTGGAAACCTCTGGAGGTCATCTCGGCTGTTCCTGAGAAATAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CAA 90 bp AAACAGGTCTGGGGTTCGTGGCTCTGGCAAGCGCCCAGAGACAACTGCGTCTCTCCACATGAGACTTTATaGGCAATTGTGAGTTACTCT +
Preference number: 5 (lower is better)
Translates to: KQVWGSWLWQAPRDNCVSPHETL*AIVSYS
Trigger: AGAGTAACTCACAATTGCCAATAAAGTCTCATGTGG...AGAGACGCAGTTGTCTCTGGGCGCTTGCCAGAGCCACGAACCCCAGACCTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS GCA 90 bp CTCAGGAGTAAGACGTCAAGTCTGAAGTTGATGGCATCAGTGCTTTaGCCAAGCCACATTCCCATATGGCACCTCTTAGCACCTTCTCTC +
Preference number: 5 (lower is better)
Translates to: LRSKTSSLKLMASVL*PSHIPIWHLLAPSL
Trigger: GAGAGAAGGTGCTAAGAGGTGCCATATGGGAATGTGGCTTGGGCAAAGCACTGATGCCATCAACTTCAGACTTGACGTCTTACTCCTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589892.1
ENST00000592115.5
CDS-3UTR CAA 90 bp GCTTTTTATTTCTCAGGAACAGCCGAGATGACCTCCAGAGGTTTCCAGCGAAGCAGAAAGTCTAGGCGGTaGCACTTAGACAAGGGCCTA +
Preference number: 5 (lower is better)
Translates to: AFYFSGTAEMTSRGFQRSRKSRR*HLDKGL
Trigger: TAGGCCCTTGTCTAAGTGCAACCGCCTAGACTTTCT...GCTTCGCTGGAAACCTCTGGAGGTCATCTCGGCTGTTCCTGAGAAATAAAAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CAA 90 bp TGTCCAGTTAAACAGACCCTGGCAAACATCAGGCTCTTCCTCGAACAGAAATTCCAGCCTTCCAGCTCCTaGAAGCAGAAGAAACACTGG +
Preference number: 5 (lower is better)
Translates to: CPVKQTLANIRLFLEQKFQPSSS*KQKKHW
Trigger: CCAGTGTTTCTTCTGCTTCAAGGAGCTGGAAGGCTG...GAATTTCTGTTCGAGGAAGAGCCTGATGTTTGCCAGGGTCTGTTTAACTGGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000586192.5
ENST00000587746.5
ENST00000590925.6
ENST00000591800.1
ENST00000592734.5
CDS-3UTR CAA 90 bp AAGCTTTCAGGTGCTGGTAGCCATGAGGGTCTGGTTTTAAGGATGGCCTTTAAGGAAGTGCATTTTCAGTaGTTTCTGCCCGGAAGGAGC +
Preference number: 5 (lower is better)
Translates to: KLSGAGSHEGLVLRMAFKEVHFQ*FLPGRS
Trigger: GCTCCTTCCGGGCAGAAACAACTGAAAATGCACTTC...CTTAAAGGCCATCCTTAAAACCAGACCCTCATGGCTACCAGCACCTGAAAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CAA 90 bp TATTCTGTTGAACATGAAAGGCATCAGGCATCTTACGTCCACCCCAAGGCATTTCAGCCTTCCAGCTCCTaGAAGCAGAAGAAACACTGG +
Preference number: 5 (lower is better)
Translates to: YSVEHERHQASYVHPKAFQPSSS*KQKKHW
Trigger: CCAGTGTTTCTTCTGCTTCAAGGAGCTGGAAGGCTG...AAATGCCTTGGGGTGGACGTAAGATGCCTGATGCCTTTCATGTTCAACAGAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590449.1
CDS-3UTR CAA 90 bp ATTTTCAGTTGTTTCTGCCCGGAAGGAGCCCGGATGATACAAACAGGTCTGGGGCCACATGAGACTTTATaGGCAATTGTGAGTTACTCT +
Preference number: 5 (lower is better)
Translates to: IFSCFCPEGARMIQTGLGPHETL*AIVSYS
Trigger: AGAGTAACTCACAATTGCCAATAAAGTCTCATGTGG...CCCCAGACCTGTTTGTATCATCCGGGCTCCTTCCGGGCAGAAACAACTGAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CAA 90 bp CACTCCAACTTAGAGAACCTGAAAAATGGACATGTGGACATGTATCTGAAAGAAAATGGGGGCTCCAGTTaGGCTTGCTGGTCTCTTCTG +
Preference number: 5 (lower is better)
Translates to: HSNLENLKNGHVDMYLKENGGSS*ACWSLL
Trigger: CAGAAGAGACCAGCAAGCCAAACTGGAGCCCCCATT...TTCTTTCAGATACATGTCCACATGTCCATTTTTCAGGTTCTCTAAGTTGGAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
CDS-3UTR CAA 90 bp CTTCATGTCCAGTTAAACAGACCCTGGCAAACATCAGGCTCTTCCTCGAACAGAAGAGCTCTCTCAATTTaGTTCTTGGCTCTTTCTCTG +
Preference number: 5 (lower is better)
Translates to: LHVQLNRPWQTSGSSSNRRALSI*FLALSL
Trigger: CAGAGAAAGAGCCAAGAACAAAATTGAGAGAGCTCT...TCTGTTCGAGGAAGAGCCTGATGTTTGCCAGGGTCTGTTTAACTGGACATGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586192.5
ENST00000587746.5
ENST00000590925.6
ENST00000591800.1
CDS-3UTR CAA 90 bp TTCTCCCAGTTTAGAGGGAAAAGTCTATCTCAGGCCGACTCAGATGTGGCAGAAGTTTCCTTTGCAATTTaGTTCTTGGCTCTTTCTCTG +
Preference number: 5 (lower is better)
Translates to: FSQFRGKSLSQADSDVAEVSFAI*FLALSL
Trigger: CAGAGAAAGAGCCAAGAACAAAATTGCAAAGGAAAC...TTCTGCCACATCTGAGTCGGCCTGAGATAGACTTTTCCCTCTAAACTGGGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301633.8
ENST00000350051.8
CDS-3UTR CAA 90 bp TGTCCAGTTAAACAGACCCTGGCAAACATCAGGCTCTTCCTCGAACAGAAATTCAGAGCTCTCTCAATTTaGTTCTTGGCTCTTTCTCTG +
Preference number: 5 (lower is better)
Translates to: CPVKQTLANIRLFLEQKFRALSI*FLALSL
Trigger: CAGAGAAAGAGCCAAGAACAAAATTGAGAGAGCTCT...GAATTTCTGTTCGAGGAAGAGCCTGATGTTTGCCAGGGTCTGTTTAACTGGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586192.5
ENST00000587746.5
ENST00000590925.6
ENST00000591800.1
CDS-3UTR CAA 90 bp GTCCAGTTAAACAGACCCTGGCAAACATCAGGCTCTTCCTCGAACAGAAATTCTAGAGCTCTCTCAATTTaGTTCTTGGCTCTTTCTCTG +
Preference number: 5 (lower is better)
Translates to: VQLNRPWQTSGSSSNRNSRALSI*FLALSL
Trigger: CAGAGAAAGAGCCAAGAACAAAATTGAGAGAGCTCT...AGAATTTCTGTTCGAGGAAGAGCCTGATGTTTGCCAGGGTCTGTTTAACTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586192.5
ENST00000587746.5
ENST00000590925.6
ENST00000591800.1
CDS-3UTR CAA 90 bp CACAACCCTTCCCAGACTCCACTCCAACTTAGAGAACCTGAAAAATGGACATGTGTTTCCTTTGCAATTTaGTTCTTGGCTCTTTCTCTG +
Preference number: 5 (lower is better)
Translates to: HNPSQTPLQLREPEKWTCVSFAI*FLALSL
Trigger: CAGAGAAAGAGCCAAGAACAAAATTGCAAAGGAAAC...ACATGTCCATTTTTCAGGTTCTCTAAGTTGGAGTGGAGTCTGGGAAGGGTTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301633.8
ENST00000350051.8
CDS TCA 72 bp GGGCCAAGTCTGGCTCGTTCTCAGTGGGGCAGTGGATaGAGCCAGCCTCGGCCATCCGCTCCGGGGTGCAGG +
Preference number: 6 (lower is better)
Translates to: GPSLARSQWGSG*SQPRPSAPGCR
Trigger: CCTGCACCCCGGAGCGGATGGCCGAGGCTGGCTTCATCCACTGCCCCACTGAGAACGAGCCAGACTTGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
ENST00000586192.5
ENST00000587746.5
ENST00000590449.1
ENST00000590925.6
ENST00000591800.1
ENST00000592115.5
ENST00000592734.5
CDS CCA 72 bp CCGCCACCTCTGCCAACGGGTCCCGCGATTCAAATCTaGCGGTTAATGGCGCGCCGCGGGGCATGTCGGGAG +
Preference number: 6 (lower is better)
Translates to: PPPLPTGPAIQI*RLMARRGACRE
Trigger: CTCCCGACATGCCCCGCGGCGCGCCATTAACCGCCAGATTTGAATCGCGGGACCCGTTGGCAGAGGTGGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301633.8
CDS CCA 72 bp CACTGGGCCAAGTCTGGCTCGTTCTCAGTGGGGCAGTaGATGAAGCCAGCCTCGGCCATCCGCTCCGGGGTG +
Preference number: 6 (lower is better)
Translates to: HWAKSGSFSVGQ*MKPASAIRSGV
Trigger: CACCCCGGAGCGGATGGCCGAGGCTGGCTTCATCCACTGCCCCACTGAGAACGAGCCAGACTTGGCCCAGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
ENST00000586192.5
ENST00000587746.5
ENST00000590449.1
ENST00000590925.6
ENST00000591800.1
ENST00000592115.5
ENST00000592734.5
CDS GCA 72 bp TTGAATGTAGAGATGCGGTGGTCCTTGAGAAAGGGCTaGCAGGCAGGGGGCAACGTCGGGGCACCCATGCCG +
Preference number: 6 (lower is better)
Translates to: LNVEMRWSLRKG*QAGGNVGAPMP
Trigger: CGGCATGGGTGCCCCGACGTTGCCCCCTGCCTGGCAGCCCTTTCTCAAGGACCACCGCATCTCTACATTCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
ENST00000590449.1
ENST00000590925.6
CDS CCA 72 bp GTAAGCCACCGTGCCCGGCCCAATGGGGTCGTCATCTaGCTCCCAGCCTTCCAGCTCCTTGAAGCAGAAGAA +
Preference number: 6 (lower is better)
Translates to: VSHRARPNGVVI*LPAFQLLEAEE
Trigger: TTCTTCTGCTTCAAGGAGCTGGAAGGCTGGGAGCCAGATGACGACCCCATTGGGCCGGGCACGGTGGCTTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301633.8
ENST00000586192.5
ENST00000587746.5
ENST00000592115.5
CDS CCA 72 bp GCCACCGTGCCCGGCCCATTACATGGGGTCGTCATCTaGCTCCCAGCCTTCCAGCTCCTTGAAGCAGAAGAA +
Preference number: 6 (lower is better)
Translates to: ATVPGPLHGVVI*LPAFQLLEAEE
Trigger: TTCTTCTGCTTCAAGGAGCTGGAAGGCTGGGAGCCAGATGACGACCCCATGTAATGGGCCGGGCACGGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591800.1
CDS CCA 72 bp TCCCAGCCTTCCAGCTCCTTGAAGCAGAAGAAACACTaGGCCAAGTCTGGCTCGTTCTCAGTGGGGCAGTGG +
Preference number: 6 (lower is better)
Translates to: SQPSSSLKQKKH*AKSGSFSVGQW
Trigger: CCACTGCCCCACTGAGAACGAGCCAGACTTGGCCCAGTGTTTCTTCTGCTTCAAGGAGCTGGAAGGCTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
ENST00000586192.5
ENST00000587746.5
ENST00000590449.1
ENST00000590925.6
ENST00000591800.1
ENST00000592115.5
ENST00000592734.5
CDS CCA 72 bp GCCAGAGGCCTCAATCCATGGCAGCCAGCTGCTCGATaGCACGGCGCACTTTCTCCGCAGTTTCCTCAAATT +
Preference number: 6 (lower is better)
Translates to: ARGLNPWQPAAR*HGALSPQFPQI
Trigger: AATTTGAGGAAACTGCGGAGAAAGTGCGCCGTGCCATCGAGCAGCTGGCTGCCATGGATTGAGGCCTCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
ENST00000589892.1
CDS CCA 72 bp ACAAAGCCCATCGAGGCTGGCCAGAGAAGACTTACATaGGGTCGTCATCTGGCTCCCAGCCTTCCAGCTCCT +
Preference number: 6 (lower is better)
Translates to: TKPIEAGQRRLT*GRHLAPSLPAP
Trigger: AGGAGCTGGAAGGCTGGGAGCCAGATGACGACCCCATGTAAGTCTTCTCTGGCCAGCCTCGATGGGCTTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590449.1
CDS CCA 72 bp CAGCTCCTTGAAGCAGAAGAAACACTGGGCCAAGTCTaGCTCGTTCTCAGTGGGGCAGTGGATGAAGCCAGC +
Preference number: 6 (lower is better)
Translates to: QLLEAEETLGQV*LVLSGAVDEAS
Trigger: GCTGGCTTCATCCACTGCCCCACTGAGAACGAGCCAGACTTGGCCCAGTGTTTCTTCTGCTTCAAGGAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000301633.8
ENST00000350051.8
ENST00000374948.6
ENST00000586192.5
ENST00000587746.5
ENST00000590449.1
ENST00000590925.6
ENST00000591800.1
ENST00000592115.5
ENST00000592734.5
CDS CCA 72 bp AGGCTGGCCAGAGAAGACTTACATGGGGTCGTCATCTaGCTCCCAGCCTTCCAGCTCCTTGAAGCAGAAGAA +
Preference number: 6 (lower is better)
Translates to: RLAREDLHGVVI*LPAFQLLEAEE
Trigger: TTCTTCTGCTTCAAGGAGCTGGAAGGCTGGGAGCCAGATGACGACCCCATGTAAGTCTTCTCTGGCCAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590449.1
CDS CCA 72 bp ATTCTGCTAACAGAGCTCTCTCATGGGGTCGTCATCTaGCTCCCAGCCTTCCAGCTCCTTGAAGCAGAAGAA +
Preference number: 6 (lower is better)
Translates to: ILLTELSHGVVI*LPAFQLLEAEE
Trigger: TTCTTCTGCTTCAAGGAGCTGGAAGGCTGGGAGCCAGATGACGACCCCATGAGAGAGCTCTGTTAGCAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592734.5
CDS CCA 72 bp CGAATGCTTTTTATGTTCCTCTATGGGGTCGTCATCTaGCTCCCAGCCTTCCAGCTCCTTGAAGCAGAAGAA +
Preference number: 6 (lower is better)
Translates to: RMLFMFLYGVVI*LPAFQLLEAEE
Trigger: TTCTTCTGCTTCAAGGAGCTGGAAGGCTGGGAGCCAGATGACGACCCCATAGAGGAACATAAAAAGCATTCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350051.8
ENST00000590925.6
CDS GCA 72 bp TGCTTCTTGACAGAAAGGAAAGCGCAACCGGACGAATaGTTTTTATGTTCCTCTATGGGGTCGTCATCTGGC +
Preference number: 6 (lower is better)
Translates to: CFLTERKAQPDE*FLCSSMGSSSG
Trigger: GCCAGATGACGACCCCATAGAGGAACATAAAAAGCATTCGTCCGGTTGCGCTTTCCTTTCTGTCAAGAAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350051.8
ENST00000590925.6
CDS GCA 72 bp AAGACGTCAAGTCTGAAGTTGATGGCATCAGTGCTTTaGCCAAGCCACATTCCCATATGGCACCTCTTAGCA +
Preference number: 6 (lower is better)
Translates to: KTSSLKLMASVL*PSHIPIWHLLA
Trigger: TGCTAAGAGGTGCCATATGGGAATGTGGCTTGGGCAAAGCACTGATGCCATCAACTTCAGACTTGACGTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589892.1
ENST00000592115.5
CDS CCA 72 bp TGGACTTCCTTAGCAATTAGTTGGAAAAGTGTTACATaGTATATGTCCAAAGGAATTACATGTCAAATCCCT +
Preference number: 6 (lower is better)
Translates to: WTSLAISWKSVT*YMSKGITCQIP
Trigger: AGGGATTTGACATGTAATTCCTTTGGACATATACCATGTAACACTTTTCCAACTAATTGCTAAGGAAGTCCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592115.5