RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BIN3 (Homo sapiens)

Ensembl gene IDs: ENSG00000147439

Ensembl transcript IDs: ENST00000276416.11, ENST00000399977.8, ENST00000518366.1, ENST00000519335.5, ENST00000519513.5, ENST00000519863.5, ENST00000520292.1, ENST00000520489.5, ENST00000521140.1, ENST00000522268.1, ENST00000522687.5, ENST00000640731.1

Found 405 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CACCCAGCGCCTCTGCTGGACCACGGTGCAGTTCGCTCCAGAAGGTaGGCCAGGGCCGGGGAGGTGCGCACACACCCCTGGCATGCTGGG +
Preference number: 1 (lower is better)
Translates to: HPAPLLDHGAVRSRR*ARAGEVRTHPWHAG
Trigger: CCCAGCATGCCAGGGGTGTGTGCGCACCTCCCCGGCCCTGGCCCACCTTCTGGAGCGAACTGCACCGTGGTCCAGCAGAGGCGCTGGGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276416.11
3UTR GCA 90 bp GCCACAAGGGTGCCCTTTGTCTTGCTGGGAAGCTGGCTGAGGGCCTaGCAGGGCTGGAGGACCAGCTCTCCCGCACAGGGTTCAGGGCCT +
Preference number: 1 (lower is better)
Translates to: ATRVPFVLLGSWLRA*QGWRTSSPAQGSGP
Trigger: AGGCCCTGAACCCTGTGCGGGAGAGCTGGTCCTCCAGCCCTGGCAGGCCCTCAGCCAGCTTCCCAGCAAGACAAAGGGCACCCTTGTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
3UTR CCA 90 bp AGCCCCAAGGGTTTGTCTACACTGCTTACCTGCTGGGGCTGTGAGTaGGGAGACGGCGGCCTGCCTAGGGCTCCTGGTGCCAGGCTCAGG +
Preference number: 1 (lower is better)
Translates to: SPKGLSTLLTCWGCE*GDGGLPRAPGARLR
Trigger: CCTGAGCCTGGCACCAGGAGCCCTAGGCAGGCCGCCGTCTCCCCACTCACAGCCCCAGCAGGTAAGCAGTGTAGACAAACCCTTGGGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
3UTR CCA 90 bp GTGCCCTTTGTCTTGCTGGGAAGCTGGCTGAGGGCCTGCCAGGGCTaGAGGACCAGCTCTCCCGCACAGGGTTCAGGGCCTCTCCCAGAA +
Preference number: 1 (lower is better)
Translates to: VPFVLLGSWLRACQG*RTSSPAQGSGPLPE
Trigger: TTCTGGGAGAGGCCCTGAACCCTGTGCGGGAGAGCTGGTCCTCCAGCCCTGGCAGGCCCTCAGCCAGCTTCCCAGCAAGACAAAGGGCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
3UTR CCA 90 bp ACCGCGTGGGAGACTCAGAGGAGTGGCCCTCAGAGAGAGCAGCAGTaGACGATGCAACGCTGCAGGTCCACACCGGCCTCGTCTTTGTGG +
Preference number: 1 (lower is better)
Translates to: TAWETQRSGPQREQQ*TMQRCRSTPASSLW
Trigger: CCACAAAGACGAGGCCGGTGTGGACCTGCAGCGTTGCATCGTCCACTGCTGCTCTCTCTGAGGGCCACTCCTCTGAGTCTCCCACGCGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520292.1
3UTR GCA 90 bp CCCAACTTAGCCAACGAAGCCCATGGCCTCAGAAGGGCTGCAGCTTaGTCAGGCCGTGGGCCAGGATGCATGCTGGACGGTTCTCCAAAT +
Preference number: 1 (lower is better)
Translates to: PNLANEAHGLRRAAA*SGRGPGCMLDGSPN
Trigger: ATTTGGAGAACCGTCCAGCATGCATCCTGGCCCACGGCCTGAGCAAGCTGCAGCCCTTCTGAGGCCATGGGCTTCGTTGGCTAAGTTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
3UTR GCA 90 bp GGGAGACTCAGAGGAGTGGCCCTCAGAGAGAGCAGCAGTGGACGATaGAACGCTGCAGGTCCACACCGGCCTCGTCTTTGTGGATCATGT +
Preference number: 1 (lower is better)
Translates to: GRLRGVALRESSSGR*NAAGPHRPRLCGSC
Trigger: ACATGATCCACAAAGACGAGGCCGGTGTGGACCTGCAGCGTTGCATCGTCCACTGCTGCTCTCTCTGAGGGCCACTCCTCTGAGTCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520292.1
3UTR TCA 90 bp GACAGTTCCACTGACAGCTTGCGTTCCCGAGGTACCAGTCCTCAGTaGCCTCGGGAACCCCAACCACTTAGGTCCCAAAGCCACAAGGGT +
Preference number: 1 (lower is better)
Translates to: DSSTDSLRSRGTSPQ*PREPQPLRSQSHKG
Trigger: ACCCTTGTGGCTTTGGGACCTAAGTGGTTGGGGTTCCCGAGGTCACTGAGGACTGGTACCTCGGGAACGCAAGCTGTCAGTGGAACTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
3UTR GCA 90 bp GCTTTGAGACCTGTGAATTCTTGTGGGACAGTTCCACTGACAGCTTaGGTTCCCGAGGTACCAGTCCTCAGTGACCTCGGGAACCCCAAC +
Preference number: 1 (lower is better)
Translates to: ALRPVNSCGTVPLTA*VPEVPVLSDLGNPN
Trigger: GTTGGGGTTCCCGAGGTCACTGAGGACTGGTACCTCGGGAACGCAAGCTGTCAGTGGAACTGTCCCACAAGAATTCACAGGTCTCAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
3UTR CCA 90 bp CGCTTCATGGCCGTGTCCAGGGCCGTCACCATGTTCAGAAGGTCCTaGTCTTGCTCACAGAGGGGATTGGAGAGTAAGTCCAAGGATATC +
Preference number: 1 (lower is better)
Translates to: RFMAVSRAVTMFRRS*SCSQRGLESKSKDI
Trigger: GATATCCTTGGACTTACTCTCCAATCCCCTCTGTGAGCAAGACCAGGACCTTCTGAACATGGTGACGGCCCTGGACACGGCCATGAAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522687.5
3UTR GCA 90 bp ATGGCCGTGTCCAGGGCCGTCACCATGTTCAGAAGGTCCTGGTCTTaGTCACAGAGGGGATTGGAGAGTAAGTCCAAGGATATCTTCACG +
Preference number: 1 (lower is better)
Translates to: MAVSRAVTMFRRSWS*SQRGLESKSKDIFT
Trigger: CGTGAAGATATCCTTGGACTTACTCTCCAATCCCCTCTGTGAGCAAGACCAGGACCTTCTGAACATGGTGACGGCCCTGGACACGGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522687.5
3UTR CCA 90 bp GAGACACAAACCCACTGTTCCTGCTTTGAGACCTGTGAATTCTTGTaGGACAGTTCCACTGACAGCTTGCGTTCCCGAGGTACCAGTCCT +
Preference number: 1 (lower is better)
Translates to: ETQTHCSCFETCEFL*DSSTDSLRSRGTSP
Trigger: AGGACTGGTACCTCGGGAACGCAAGCTGTCAGTGGAACTGTCCCACAAGAATTCACAGGTCTCAAAGCAGGAACAGTGGGTTTGTGTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276416.11
ENST00000519513.5
3UTR CCA 90 bp CCGTCACCATGTTCAGAAGGTCCTGGTCTTGCTCACAGAGGGGATTaGAGAGTAAGTCCAAGGATATCTTCACGGCAGATTTTGACATGG +
Preference number: 1 (lower is better)
Translates to: PSPCSEGPGLAHRGD*RVSPRISSRQILTW
Trigger: CCATGTCAAAATCTGCCGTGAAGATATCCTTGGACTTACTCTCCAATCCCCTCTGTGAGCAAGACCAGGACCTTCTGAACATGGTGACGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522687.5
3UTR-3UTR GCA 90 bp CATGGCCTCAGAAGGGCTGCAGCTTGCTCAGGCCGTGGGCCAGGATGCATGCTGGGGGAGACGGCGGCCTaGCTAGGGCTCCTGGTGCCA +
Preference number: 2 (lower is better)
Translates to: HGLRRAAACSGRGPGCMLGETAA*LGLLVP
Trigger: TGGCACCAGGAGCCCTAGGCAGGCCGCCGTCTCCCC...CAGCATGCATCCTGGCCCACGGCCTGAGCAAGCTGCAGCCCTTCTGAGGCCATG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
3UTR-3UTR TCA 90 bp GCCCTCAGAGAGAGCAGCAGTGGACGATGCAACGCTGCAGGTCCACACCGGCCTGGAGCAGTGCTCTCCTaGGGCTCTCGCTGCTGCTGC +
Preference number: 2 (lower is better)
Translates to: ALRESSSGRCNAAGPHRPGAVLS*GSRCCC
Trigger: GCAGCAGCAGCGAGAGCCTCAGGAGAGCACTGCTCC...AGGCCGGTGTGGACCTGCAGCGTTGCATCGTCCACTGCTGCTCTCTCTGAGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520292.1
3UTR-3UTR CCA 90 bp CTCAGAGAGAGCAGCAGTGGACGATGCAACGCTGCAGGTCCACACCGGCCTCGTTCTCGCTGCTGCTGCTaGAGGGCTGGCCCTCGGTGC +
Preference number: 2 (lower is better)
Translates to: LRESSSGRCNAAGPHRPRSRCCC*RAGPRC
Trigger: GCACCGAGGGCCAGCCCTCCAGCAGCAGCAGCGAGA...ACGAGGCCGGTGTGGACCTGCAGCGTTGCATCGTCCACTGCTGCTCTCTCTGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520292.1
3UTR-3UTR GCA 90 bp GACGATGCAACGCTGCAGGTCCACACCGGCCTCGTCTTTGTGGATCATGTGTCCGGCTCTCGCTGCTGCTaGTGGAGGGCTGGCCCTCGG +
Preference number: 2 (lower is better)
Translates to: DDATLQVHTGLVFVDHVSGSRCC*WRAGPR
Trigger: CCGAGGGCCAGCCCTCCAGCAGCAGCAGCGAGAGCC...GGACACATGATCCACAAAGACGAGGCCGGTGTGGACCTGCAGCGTTGCATCGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520292.1
3UTR-3UTR GCA 90 bp CCACTTAGGTCCCAAAGCCACAAGGGTGCCCTTTGTCTTGCTGGGAAGCTGGCTGGGGAGACGGCGGCCTaGCTAGGGCTCCTGGTGCCA +
Preference number: 2 (lower is better)
Translates to: PLRSQSHKGALCLAGKLAGETAA*LGLLVP
Trigger: TGGCACCAGGAGCCCTAGGCAGGCCGCCGTCTCCCC...AGCCAGCTTCCCAGCAAGACAAAGGGCACCCTTGTGGCTTTGGGACCTAAGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
3UTR-3UTR CCA 90 bp TCCACTGTGACTAGAAGGGACCGCGTGGGAGACTCAGAGGAGTGGCCCTCAGAGCTGCTGCTGGAGGGCTaGCCCTCGGTGCAATGGCAG +
Preference number: 2 (lower is better)
Translates to: STVTRRDRVGDSEEWPSELLLEG*PSVQWQ
Trigger: CTGCCATTGCACCGAGGGCCAGCCCTCCAGCAGCAG...CTCTGAGGGCCACTCCTCTGAGTCTCCCACGCGGTCCCTTCTAGTCACAGTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520292.1
3UTR CAA 90 bp AACCCCAACCACTTAGGTCCCAAAGCCACAAGGGTGCCCTTTGTCTaGCTGGGAAGCTGGCTGAGGGCCTGCCAGGGCTGGAGGACCAGC +
Preference number: 2 (lower is better)
Translates to: NPNHLGPKATRVPFV*LGSWLRACQGWRTS
Trigger: GCTGGTCCTCCAGCCCTGGCAGGCCCTCAGCCAGCTTCCCAGCAAGACAAAGGGCACCCTTGTGGCTTTGGGACCTAAGTGGTTGGGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
3UTR-3UTR GCA 90 bp GCCCTCAGAGAGAGCAGCAGTGGACGATGCAACGCTGCAGGTCCACACCGGCCTAGTGACCAGGAGCAGTaGTCTCCTGAGGCTCTCGCT +
Preference number: 2 (lower is better)
Translates to: ALRESSSGRCNAAGPHRPSDQEQ*SPEALA
Trigger: AGCGAGAGCCTCAGGAGAGCACTGCTCCTGGTCACT...AGGCCGGTGTGGACCTGCAGCGTTGCATCGTCCACTGCTGCTCTCTCTGAGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520292.1
3UTR-3UTR CCA 90 bp CACTTAGGTCCCAAAGCCACAAGGGTGCCCTTTGTCTTGCTGGGAAGCTGGCTGTGCTGGGGCTGTGAGTaGGGAGACGGCGGCCTGCCT +
Preference number: 2 (lower is better)
Translates to: HLGPKATRVPFVLLGSWLCWGCE*GDGGLP
Trigger: AGGCAGGCCGCCGTCTCCCCACTCACAGCCCCAGCA...CAGCCAGCTTCCCAGCAAGACAAAGGGCACCCTTGTGGCTTTGGGACCTAAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
3UTR-3UTR CCA 90 bp CCACTTAGGTCCCAAAGCCACAAGGGTGCCCTTTGTCTTGCTGGGAAGCTGGCTTGCTGGGGCTGTGAGTaGGGAGACGGCGGCCTGCCT +
Preference number: 2 (lower is better)
Translates to: PLRSQSHKGALCLAGKLACWGCE*GDGGLP
Trigger: AGGCAGGCCGCCGTCTCCCCACTCACAGCCCCAGCA...AGCCAGCTTCCCAGCAAGACAAAGGGCACCCTTGTGGCTTTGGGACCTAAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
3UTR CAA 90 bp CCCCAACTTAGCCAACGAAGCCCATGGCCTCAGAAGGGCTGCAGCTaGCTCAGGCCGTGGGCCAGGATGCATGCTGGACGGTTCTCCAAA +
Preference number: 2 (lower is better)
Translates to: PQLSQRSPWPQKGCS*LRPWARMHAGRFSK
Trigger: TTTGGAGAACCGTCCAGCATGCATCCTGGCCCACGGCCTGAGCAAGCTGCAGCCCTTCTGAGGCCATGGGCTTCGTTGGCTAAGTTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
3UTR-3UTR TCA 90 bp ACCCCCAACTTAGCCAACGAAGCCCATGGCCTCAGAAGGGCTGCAGCTTGCTCACAAAGGGCCGGCAAGTaGACCAGGGCCACCTCTGTC +
Preference number: 2 (lower is better)
Translates to: TPNLANEAHGLRRAAACSQRAGK*TRATSV
Trigger: GACAGAGGTGGCCCTGGTTCACTTGCCGGCCCTTTG...TGAGCAAGCTGCAGCCCTTCTGAGGCCATGGGCTTCGTTGGCTAAGTTGGGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
3UTR-3UTR TCA 90 bp TGCAAGGCTAAGACCCCCAACTTAGCCAACGAAGCCCATGGCCTCAGAAGGGCTCAAAGGGCCGGCAAGTaGACCAGGGCCACCTCTGTC +
Preference number: 2 (lower is better)
Translates to: CKAKTPNLANEAHGLRRAQRAGK*TRATSV
Trigger: GACAGAGGTGGCCCTGGTTCACTTGCCGGCCCTTTG...AGCCCTTCTGAGGCCATGGGCTTCGTTGGCTAAGTTGGGGGTCTTAGCCTTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
3UTR-3UTR GCA 90 bp CTTAGGTCCCAAAGCCACAAGGGTGCCCTTTGTCTTGCTGGGAAGCTGGCTGAGGGCCGTGGGCCAGGATaGATGCTGGACGGTTCTCCA +
Preference number: 2 (lower is better)
Translates to: LRSQSHKGALCLAGKLAEGRGPG*MLDGSP
Trigger: TGGAGAACCGTCCAGCATGCATCCTGGCCCACGGCC...CTCAGCCAGCTTCCCAGCAAGACAAAGGGCACCCTTGTGGCTTTGGGACCTAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
3UTR-3UTR GCA 90 bp CCACTTAGGTCCCAAAGCCACAAGGGTGCCCTTTGTCTTGCTGGGAAGCTGGCTGGCCGTGGGCCAGGATaGATGCTGGACGGTTCTCCA +
Preference number: 2 (lower is better)
Translates to: PLRSQSHKGALCLAGKLAGRGPG*MLDGSP
Trigger: TGGAGAACCGTCCAGCATGCATCCTGGCCCACGGCC...AGCCAGCTTCCCAGCAAGACAAAGGGCACCCTTGTGGCTTTGGGACCTAAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
3UTR-3UTR GCA 90 bp GGCCAGAGGGCTCCCCAGGATGGGTCTTTTGGAGGTAGATTTGATGCCCACAACTGGCCTCAGAAGGGCTaGAGCTTGCTCAGGCCGTGG +
Preference number: 2 (lower is better)
Translates to: GQRAPQDGSFGGRFDAHNWPQKG*SLLRPW
Trigger: CCACGGCCTGAGCAAGCTGCAGCCCTTCTGAGGCCA...GTTGTGGGCATCAAATCTACCTCCAAAAGACCCATCCTGGGGAGCCCTCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
3UTR-3UTR GCA 90 bp AGAAGGGCTGCAGCTTGCTCAGGCCGTGGGCCAGGATGCATGCTGGACGGTTCTAGGGTTTGTCTACACTaGTTACCTGCTGGGGCTGTG +
Preference number: 2 (lower is better)
Translates to: RRAAACSGRGPGCMLDGSRVCLH*LPAGAV
Trigger: CACAGCCCCAGCAGGTAAGCAGTGTAGACAAACCCT...AGAACCGTCCAGCATGCATCCTGGCCCACGGCCTGAGCAAGCTGCAGCCCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
3UTR-3UTR CCA 90 bp CTTAGGTCCCAAAGCCACAAGGGTGCCCTTTGTCTTGCTGGGAAGCTGGCTGAGAGCCAACGAAGCCCATaGCCTCAGAAGGGCTGCAGC +
Preference number: 2 (lower is better)
Translates to: LRSQSHKGALCLAGKLAESQRSP*PQKGCS
Trigger: GCTGCAGCCCTTCTGAGGCCATGGGCTTCGTTGGCT...CTCAGCCAGCTTCCCAGCAAGACAAAGGGCACCCTTGTGGCTTTGGGACCTAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
3UTR-3UTR GCA 90 bp CCCAACTTAGCCAACGAAGCCCATGGCCTCAGAAGGGCTGCAGCTTGCTCAGGCGTGGGCCAGGATGCATaGTGGACGGTTCTCCAAATA +
Preference number: 2 (lower is better)
Translates to: PNLANEAHGLRRAAACSGVGQDA*WTVLQI
Trigger: TATTTGGAGAACCGTCCAGCATGCATCCTGGCCCAC...GCCTGAGCAAGCTGCAGCCCTTCTGAGGCCATGGGCTTCGTTGGCTAAGTTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
3UTR-3UTR CCA 90 bp CACTTAGGTCCCAAAGCCACAAGGGTGCCCTTTGTCTTGCTGGGAAGCTGGCTGACACTGCTTACCTGCTaGGGCTGTGAGTGGGGAGAC +
Preference number: 2 (lower is better)
Translates to: HLGPKATRVPFVLLGSWLTLLTC*GCEWGD
Trigger: GTCTCCCCACTCACAGCCCCAGCAGGTAAGCAGTGT...CAGCCAGCTTCCCAGCAAGACAAAGGGCACCCTTGTGGCTTTGGGACCTAAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
3UTR-3UTR CCA 90 bp TGTGGGACAGTTCCACTGACAGCTTGCGTTCCCGAGGTACCAGTCCTCAGTGACACACTGCTTACCTGCTaGGGCTGTGAGTGGGGAGAC +
Preference number: 2 (lower is better)
Translates to: CGTVPLTACVPEVPVLSDTLLTC*GCEWGD
Trigger: GTCTCCCCACTCACAGCCCCAGCAGGTAAGCAGTGT...GTCACTGAGGACTGGTACCTCGGGAACGCAAGCTGTCAGTGGAACTGTCCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
3UTR-3UTR GCA 90 bp GGCCAGAGGGCTCCCCAGGATGGGTCTTTTGGAGGTAGATTTGATGCCCACAACTCTACACTGCTTACCTaGTGGGGCTGTGAGTGGGGA +
Preference number: 2 (lower is better)
Translates to: GQRAPQDGSFGGRFDAHNSTLLT*WGCEWG
Trigger: TCCCCACTCACAGCCCCAGCAGGTAAGCAGTGTAGA...GTTGTGGGCATCAAATCTACCTCCAAAAGACCCATCCTGGGGAGCCCTCTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
3UTR-3UTR GCA 90 bp GGCCAGAGGGCTCCCCAGGATGGGTCTTTTGGAGGTAGATTTGATGCCCACAACAGGGTTTGTCTACACTaGTTACCTGCTGGGGCTGTG +
Preference number: 2 (lower is better)
Translates to: GQRAPQDGSFGGRFDAHNRVCLH*LPAGAV
Trigger: CACAGCCCCAGCAGGTAAGCAGTGTAGACAAACCCT...GTTGTGGGCATCAAATCTACCTCCAAAAGACCCATCCTGGGGAGCCCTCTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
3UTR-3UTR CCA 90 bp AGGGGTTTCCTCTGCTCGCCTAAGTTACAGCACAATACTATGTGGACGTTTCATAGGGCCTGCCAGGGCTaGAGGACCAGCTCTCCCGCA +
Preference number: 2 (lower is better)
Translates to: RGFLCSPKLQHNTMWTFHRACQG*RTSSPA
Trigger: TGCGGGAGAGCTGGTCCTCCAGCCCTGGCAGGCCCT...ATGAAACGTCCACATAGTATTGTGCTGTAACTTAGGCGAGCAGAGGAAACCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276416.11
3UTR-3UTR GCA 90 bp ACCCCCAACTTAGCCAACGAAGCCCATGGCCTCAGAAGGGCTGCAGCTTGCTCAGGAAGAGTCATTCATTaGAAAGGGCCGGCAAGTGAA +
Preference number: 2 (lower is better)
Translates to: TPNLANEAHGLRRAAACSGRVIH*KGPASE
Trigger: TTCACTTGCCGGCCCTTTGCAATGAATGACTCTTCC...TGAGCAAGCTGCAGCCCTTCTGAGGCCATGGGCTTCGTTGGCTAAGTTGGGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
3UTR-3UTR GCA 90 bp AATTCTTGTGGGACAGTTCCACTGACAGCTTGCGTTCCCGAGGTACCAGTCCTCTCTACACTGCTTACCTaGTGGGGCTGTGAGTGGGGA +
Preference number: 2 (lower is better)
Translates to: NSCGTVPLTACVPEVPVLSTLLT*WGCEWG
Trigger: TCCCCACTCACAGCCCCAGCAGGTAAGCAGTGTAGA...GAGGACTGGTACCTCGGGAACGCAAGCTGTCAGTGGAACTGTCCCACAAGAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
3UTR-3UTR GCA 90 bp AGTTCCAACCAGCTGCTTCAGGAAAATGCCCTGAGGACCTCCACTGTGACTAGAAGCAGCAGTGGACGATaGAACGCTGCAGGTCCACAC +
Preference number: 2 (lower is better)
Translates to: SSNQLLQENALRTSTVTRSSSGR*NAAGPH
Trigger: GTGTGGACCTGCAGCGTTGCATCGTCCACTGCTGCT...TCTAGTCACAGTGGAGGTCCTCAGGGCATTTTCCTGAAGCAGCTGGTTGGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520292.1
3UTR-3UTR CCA 90 bp CAGGATGGGTCTTTTGGAGGTAGATTTGATGCCCACAACGCATGCAAGGCTAAGAGCTTGCTCAGGCCGTaGGCCAGGATGCATGCTGGA +
Preference number: 2 (lower is better)
Translates to: QDGSFGGRFDAHNACKAKSLLRP*ARMHAG
Trigger: TCCAGCATGCATCCTGGCCCACGGCCTGAGCAAGCT...CTTAGCCTTGCATGCGTTGTGGGCATCAAATCTACCTCCAAAAGACCCATCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
3UTR-3UTR TCA 90 bp CTGTTCCCGCCTCTTCACAGCCATGTTGAGGCTCGGGAAGACACTGCCGAACTTTCACCTTTTCCTGATTaGAGGCATCCATCCGCTTCA +
Preference number: 2 (lower is better)
Translates to: LFPPLHSHVEAREDTAELSPFPD*RHPSAS
Trigger: TGAAGCGGATGGATGCCTTCAATCAGGAAAAGGTGA...AAGTTCGGCAGTGTCTTCCCGAGCCTCAACATGGCTGTGAAGAGGCGGGAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522687.5
3UTR-3UTR GCA 90 bp TTCACGGCAGATTTTGACATGGCCGGGCATGGTGGTGGTGACGGCGGCTCCCAGTCCTTTTGTGATCAGTaGTTTGTAGGAAAGGTGTGT +
Preference number: 2 (lower is better)
Translates to: FTADFDMAGHGGGDGGSQSFCDQ*FVGKVC
Trigger: ACACACCTTTCCTACAAAGCACTGATCACAAAAGGA...CTGGGAGCCGCCGTCACCACCACCATGCCCGGCCATGTCAAAATCTGCCGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522687.5
3UTR-3UTR GCA 90 bp CAGGATGGGTCTTTTGGAGGTAGATTTGATGCCCACAACGCATGCAAGGCTAAGTCTACACTGCTTACCTaGTGGGGCTGTGAGTGGGGA +
Preference number: 2 (lower is better)
Translates to: QDGSFGGRFDAHNACKAKSTLLT*WGCEWG
Trigger: TCCCCACTCACAGCCCCAGCAGGTAAGCAGTGTAGA...CTTAGCCTTGCATGCGTTGTGGGCATCAAATCTACCTCCAAAAGACCCATCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
3UTR-3UTR GCA 90 bp AATTCTTGTGGGACAGTTCCACTGACAGCTTGCGTTCCCGAGGTACCAGTCCTCGGAAGAGTCATTCATTaGAAAGGGCCGGCAAGTGAA +
Preference number: 2 (lower is better)
Translates to: NSCGTVPLTACVPEVPVLGRVIH*KGPASE
Trigger: TTCACTTGCCGGCCCTTTGCAATGAATGACTCTTCC...GAGGACTGGTACCTCGGGAACGCAAGCTGTCAGTGGAACTGTCCCACAAGAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
3UTR-3UTR GCA 90 bp CAGGATGGGTCTTTTGGAGGTAGATTTGATGCCCACAACGCATGCAAGGCTAAGAGGGTTTGTCTACACTaGTTACCTGCTGGGGCTGTG +
Preference number: 2 (lower is better)
Translates to: QDGSFGGRFDAHNACKAKRVCLH*LPAGAV
Trigger: CACAGCCCCAGCAGGTAAGCAGTGTAGACAAACCCT...CTTAGCCTTGCATGCGTTGTGGGCATCAAATCTACCTCCAAAAGACCCATCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
3UTR CAA 90 bp GCCGTCACCATGTTCAGAAGGTCCTGGTCTTGCTCACAGAGGGGATaGGAGAGTAAGTCCAAGGATATCTTCACGGCAGATTTTGACATG +
Preference number: 2 (lower is better)
Translates to: AVTMFRRSWSCSQRG*ESKSKDIFTADFDM
Trigger: CATGTCAAAATCTGCCGTGAAGATATCCTTGGACTTACTCTCCAATCCCCTCTGTGAGCAAGACCAGGACCTTCTGAACATGGTGACGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522687.5
3UTR-3UTR GCA 90 bp CAGGATGGGTCTTTTGGAGGTAGATTTGATGCCCACAACGCATGCAAGGCTAAGGGAAGAGTCATTCATTaGAAAGGGCCGGCAAGTGAA +
Preference number: 2 (lower is better)
Translates to: QDGSFGGRFDAHNACKAKGRVIH*KGPASE
Trigger: TTCACTTGCCGGCCCTTTGCAATGAATGACTCTTCC...CTTAGCCTTGCATGCGTTGTGGGCATCAAATCTACCTCCAAAAGACCCATCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
3UTR-3UTR TCA 90 bp CTATGTGAGGTTCTAGATCCGCATAAGCAGGAAGAAGGCCCAGGTTGCTGTCTTGTTGATTCAAAGCTTTaGTTCTTATGCAAAGGCCAT +
Preference number: 2 (lower is better)
Translates to: LCEVLDPHKQEEGPGCCLVDSKL*FLCKGH
Trigger: ATGGCCTTTGCATAAGAATCAAAGCTTTGAATCAAC...AAGACAGCAACCTGGGCCTTCTTCCTGCTTATGCGGATCTAGAACCTCACATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522268.1
3UTR GCA 72 bp ACACACCCCTGGCATGCTGGGCTGCCTGCTGGAGGGTaGTGCTGCTCCGTGGAGGGCAGCAGGCCCAGGAAG +
Preference number: 3 (lower is better)
Translates to: THPWHAGLPAGG*CCSVEGSRPRK
Trigger: CTTCCTGGGCCTGCTGCCCTCCACGGAGCAGCAGCACCCTCCAGCAGGCAGCCCAGCATGCCAGGGGTGTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276416.11
3UTR-3UTR CAA 90 bp GCTGCTCCGTGGAGGGCAGCAGGCCCAGGAAGGGGTTTCCTCTGCTCGCCTAAGCAGAAGGGCTGCAGCTaGCTCAGGCCGTGGGCCAGG +
Preference number: 3 (lower is better)
Translates to: AAPWRAAGPGRGFLCSPKQKGCS*LRPWAR
Trigger: CCTGGCCCACGGCCTGAGCAAGCTGCAGCCCTTCTG...CTTAGGCGAGCAGAGGAAACCCCTTCCTGGGCCTGCTGCCCTCCACGGAGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276416.11
3UTR CCA 72 bp GTCTTGCTGGGAAGCTGGCTGAGGGCCTGCCAGGGCTaGAGGACCAGCTCTCCCGCACAGGGTTCAGGGCCT +
Preference number: 3 (lower is better)
Translates to: VLLGSWLRACQG*RTSSPAQGSGP
Trigger: AGGCCCTGAACCCTGTGCGGGAGAGCTGGTCCTCCAGCCCTGGCAGGCCCTCAGCCAGCTTCCCAGCAAGAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
3UTR GCA 72 bp TTACCTGCTGGGGCTGTGAGTGGGGAGACGGCGGCCTaGCTAGGGCTCCTGGTGCCAGGCTCAGGAAGAGTC +
Preference number: 3 (lower is better)
Translates to: LPAGAVSGETAA*LGLLVPGSGRV
Trigger: GACTCTTCCTGAGCCTGGCACCAGGAGCCCTAGGCAGGCCGCCGTCTCCCCACTCACAGCCCCAGCAGGTAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
3UTR CCA 72 bp GGTTTGTCTACACTGCTTACCTGCTGGGGCTGTGAGTaGGGAGACGGCGGCCTGCCTAGGGCTCCTGGTGCC +
Preference number: 3 (lower is better)
Translates to: GLSTLLTCWGCE*GDGGLPRAPGA
Trigger: GGCACCAGGAGCCCTAGGCAGGCCGCCGTCTCCCCACTCACAGCCCCAGCAGGTAAGCAGTGTAGACAAACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
3UTR-3UTR CAA 90 bp CCACGGTGCAGTTCGCTCCAGAAGGTGGGCCAGGGCCGGGGAGGTGCGCACACAAGTTCCACTGACAGCTaGCGTTCCCGAGGTACCAGT +
Preference number: 3 (lower is better)
Translates to: PRCSSLQKVGQGRGGAHTSSTDS*RSRGTS
Trigger: ACTGGTACCTCGGGAACGCAAGCTGTCAGTGGAACT...TGTGTGCGCACCTCCCCGGCCCTGGCCCACCTTCTGGAGCGAACTGCACCGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276416.11
3UTR-3UTR CAA 90 bp AGGGCTCCCCAGGATGGGTCTTTTGGAGGTAGATTTGATGCCCACAACGCATGCCAGAAGGGCTGCAGCTaGCTCAGGCCGTGGGCCAGG +
Preference number: 3 (lower is better)
Translates to: RAPQDGSFGGRFDAHNACQKGCS*LRPWAR
Trigger: CCTGGCCCACGGCCTGAGCAAGCTGCAGCCCTTCTG...GCATGCGTTGTGGGCATCAAATCTACCTCCAAAAGACCCATCCTGGGGAGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
3UTR GCA 72 bp CAACTTAGCCAACGAAGCCCATGGCCTCAGAAGGGCTaGAGCTTGCTCAGGCCGTGGGCCAGGATGCATGCT +
Preference number: 3 (lower is better)
Translates to: QLSQRSPWPQKG*SLLRPWARMHA
Trigger: AGCATGCATCCTGGCCCACGGCCTGAGCAAGCTGCAGCCCTTCTGAGGCCATGGGCTTCGTTGGCTAAGTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
3UTR GCA 72 bp GGCCCTCAGAGAGAGCAGCAGTGGACGATGCAACGCTaGAGGTCCACACCGGCCTCGTCTTTGTGGATCATG +
Preference number: 3 (lower is better)
Translates to: GPQREQQWTMQR*RSTPASSLWIM
Trigger: CATGATCCACAAAGACGAGGCCGGTGTGGACCTGCAGCGTTGCATCGTCCACTGCTGCTCTCTCTGAGGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520292.1
3UTR GCA 72 bp AGAGGAGTGGCCCTCAGAGAGAGCAGCAGTGGACGATaGAACGCTGCAGGTCCACACCGGCCTCGTCTTTGT +
Preference number: 3 (lower is better)
Translates to: RGVALRESSSGR*NAAGPHRPRLC
Trigger: ACAAAGACGAGGCCGGTGTGGACCTGCAGCGTTGCATCGTCCACTGCTGCTCTCTCTGAGGGCCACTCCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520292.1
3UTR-3UTR CAA 90 bp AAGGGCTGCAGCTTGCTCAGGCCGTGGGCCAGGATGCATGCTGGACGGTTCTCCAAAAGCCCCAAGGGTTaGTCTACACTGCTTACCTGC +
Preference number: 3 (lower is better)
Translates to: KGCSLLRPWARMHAGRFSKSPKG*STLLTC
Trigger: GCAGGTAAGCAGTGTAGACAAACCCTTGGGGCTTTT...GGAGAACCGTCCAGCATGCATCCTGGCCCACGGCCTGAGCAAGCTGCAGCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
3UTR TCA 72 bp ACTGACAGCTTGCGTTCCCGAGGTACCAGTCCTCAGTaGCCTCGGGAACCCCAACCACTTAGGTCCCAAAGC +
Preference number: 3 (lower is better)
Translates to: TDSLRSRGTSPQ*PREPQPLRSQS
Trigger: GCTTTGGGACCTAAGTGGTTGGGGTTCCCGAGGTCACTGAGGACTGGTACCTCGGGAACGCAAGCTGTCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
3UTR GCA 72 bp CCGTGGAGGGCAGCAGGCCCAGGAAGGGGTTTCCTCTaGTCGCCTAAGTTACAGCACAATACTATGTGGACG +
Preference number: 3 (lower is better)
Translates to: PWRAAGPGRGFL*SPKLQHNTMWT
Trigger: CGTCCACATAGTATTGTGCTGTAACTTAGGCGAGCAGAGGAAACCCCTTCCTGGGCCTGCTGCCCTCCACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276416.11
3UTR-3UTR CAA 90 bp AATTCTTGTGGGACAGTTCCACTGACAGCTTGCGTTCCCGAGGTACCAGTCCTCCCACAAGGGTGCCCTTaGTCTTGCTGGGAAGCTGGC +
Preference number: 3 (lower is better)
Translates to: NSCGTVPLTACVPEVPVLPQGCP*SCWEAG
Trigger: GCCAGCTTCCCAGCAAGACAAAGGGCACCCTTGTGG...GAGGACTGGTACCTCGGGAACGCAAGCTGTCAGTGGAACTGTCCCACAAGAATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
3UTR GCA 72 bp CCTGTGAATTCTTGTGGGACAGTTCCACTGACAGCTTaGGTTCCCGAGGTACCAGTCCTCAGTGACCTCGGG +
Preference number: 3 (lower is better)
Translates to: PVNSCGTVPLTA*VPEVPVLSDLG
Trigger: CCCGAGGTCACTGAGGACTGGTACCTCGGGAACGCAAGCTGTCAGTGGAACTGTCCCACAAGAATTCACAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
3UTR-3UTR CAA 90 bp CTTAGGTCCCAAAGCCACAAGGGTGCCCTTTGTCTTGCTGGGAAGCTGGCTGAGCCCAGGATGGGTCTTTaGGAGGTAGATTTGATGCCC +
Preference number: 3 (lower is better)
Translates to: LRSQSHKGALCLAGKLAEPRMGL*EVDLMP
Trigger: GGGCATCAAATCTACCTCCAAAAGACCCATCCTGGG...CTCAGCCAGCTTCCCAGCAAGACAAAGGGCACCCTTGTGGCTTTGGGACCTAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
3UTR-3UTR CAA 90 bp TGCAAGGCTAAGACCCCCAACTTAGCCAACGAAGCCCATGGCCTCAGAAGGGCTAAAAGCCCCAAGGGTTaGTCTACACTGCTTACCTGC +
Preference number: 3 (lower is better)
Translates to: CKAKTPNLANEAHGLRRAKSPKG*STLLTC
Trigger: GCAGGTAAGCAGTGTAGACAAACCCTTGGGGCTTTT...AGCCCTTCTGAGGCCATGGGCTTCGTTGGCTAAGTTGGGGGTCTTAGCCTTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
3UTR-3UTR CAA 90 bp GGCCAGAGGGCTCCCCAGGATGGGTCTTTTGGAGGTAGATTTGATGCCCACAACAAAAGCCCCAAGGGTTaGTCTACACTGCTTACCTGC +
Preference number: 3 (lower is better)
Translates to: GQRAPQDGSFGGRFDAHNKSPKG*STLLTC
Trigger: GCAGGTAAGCAGTGTAGACAAACCCTTGGGGCTTTT...GTTGTGGGCATCAAATCTACCTCCAAAAGACCCATCCTGGGGAGCCCTCTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
3UTR GCA 72 bp TCCAGGGCCGTCACCATGTTCAGAAGGTCCTGGTCTTaGTCACAGAGGGGATTGGAGAGTAAGTCCAAGGAT +
Preference number: 3 (lower is better)
Translates to: SRAVTMFRRSWS*SQRGLESKSKD
Trigger: ATCCTTGGACTTACTCTCCAATCCCCTCTGTGAGCAAGACCAGGACCTTCTGAACATGGTGACGGCCCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522687.5
3UTR-3UTR CAA 90 bp AATTCTTGTGGGACAGTTCCACTGACAGCTTGCGTTCCCGAGGTACCAGTCCTCCCCAGGATGGGTCTTTaGGAGGTAGATTTGATGCCC +
Preference number: 3 (lower is better)
Translates to: NSCGTVPLTACVPEVPVLPRMGL*EVDLMP
Trigger: GGGCATCAAATCTACCTCCAAAAGACCCATCCTGGG...GAGGACTGGTACCTCGGGAACGCAAGCTGTCAGTGGAACTGTCCCACAAGAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
3UTR GCA 72 bp GGGTCTTTTGGAGGTAGATTTGATGCCCACAACGCATaGAAGGCTAAGACCCCCAACTTAGCCAACGAAGCC +
Preference number: 3 (lower is better)
Translates to: GSFGGRFDAHNA*KAKTPNLANEA
Trigger: GGCTTCGTTGGCTAAGTTGGGGGTCTTAGCCTTGCATGCGTTGTGGGCATCAAATCTACCTCCAAAAGACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
3UTR-3UTR CAA 90 bp GGAAGGGGTTTCCTCTGCTCGCCTAAGTTACAGCACAATACTATGTGGACGTTTCTTTTGGAGGTAGATTaGATGCCCACAACGCATGCA +
Preference number: 3 (lower is better)
Translates to: GRGFLCSPKLQHNTMWTFLLEVD*MPTTHA
Trigger: TGCATGCGTTGTGGGCATCAAATCTACCTCCAAAAG...AAACGTCCACATAGTATTGTGCTGTAACTTAGGCGAGCAGAGGAAACCCCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276416.11
3UTR-3UTR CAA 90 bp GCTCGCCTAAGTTACAGCACAATACTATGTGGACGTTTCATTGAAAATTTTACTAGGGTGCCCTTTGTCTaGCTGGGAAGCTGGCTGAGG +
Preference number: 3 (lower is better)
Translates to: ARLSYSTILCGRFIENFTRVPFV*LGSWLR
Trigger: CCTCAGCCAGCTTCCCAGCAAGACAAAGGGCACCCT...AGTAAAATTTTCAATGAAACGTCCACATAGTATTGTGCTGTAACTTAGGCGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276416.11
CDS-3UTR GCA 90 bp CGCCTCTGCTGGACCACGGTGCAGTTCGCTCCAGAAGGTGGGCCAGGGCCGGGGCCCACCCAGCGCCTCTaGTGGACCACGGTGCAGTTC +
Preference number: 4 (lower is better)
Translates to: RLCWTTVQFAPEGGPGPGPTQRL*WTTVQF
Trigger: GAACTGCACCGTGGTCCAGCAGAGGCGCTGGGTGGG...CCCCGGCCCTGGCCCACCTTCTGGAGCGAACTGCACCGTGGTCCAGCAGAGGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276416.11
CDS-3UTR CCA 90 bp CCACGGTGCAGTTCGCTCCAGAAGGTGGGCCAGGGCCGGGGAGGTGCGCACACATGCTGGGGCTGTGAGTaGGGAGACGGCGGCCTGCCT +
Preference number: 4 (lower is better)
Translates to: PRCSSLQKVGQGRGGAHTCWGCE*GDGGLP
Trigger: AGGCAGGCCGCCGTCTCCCCACTCACAGCCCCAGCA...TGTGTGCGCACCTCCCCGGCCCTGGCCCACCTTCTGGAGCGAACTGCACCGTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276416.11
CDS-3UTR GCA 90 bp CCACGGTGCAGTTCGCTCCAGAAGGTGGGCCAGGGCCGGGGAGGTGCGCACACACCGCAGCTCCTCTCGTaGCTGGTGGAGCTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: PRCSSLQKVGQGRGGAHTPQLLS*LVELGQ
Trigger: CTGGCCAAGCTCCACCAGGCACGAGAGGAGCTGCGG...TGTGTGCGCACCTCCCCGGCCCTGGCCCACCTTCTGGAGCGAACTGCACCGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276416.11
CDS-3UTR GCA 90 bp GGCCCTCAGAGAGAGCAGCAGTGGACGATGCAACGCTGCAGGTCCACACCGGCCGGCTCTCGCTGCTGCTaGTGGAGGGCTGGCCCTCGG +
Preference number: 4 (lower is better)
Translates to: GPQREQQWTMQRCRSTPAGSRCC*WRAGPR
Trigger: CCGAGGGCCAGCCCTCCAGCAGCAGCAGCGAGAGCC...GGCCGGTGTGGACCTGCAGCGTTGCATCGTCCACTGCTGCTCTCTCTGAGGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520292.1
CDS-3UTR GCA 90 bp ATGGCCTCAGAAGGGCTGCAGCTTGCTCAGGCCGTGGGCCAGGATGCATGCTGGCCAGGGCCGGGGAGGTaGGCACACACCCCTGGCATG +
Preference number: 4 (lower is better)
Translates to: MASEGLQLAQAVGQDACWPGPGR*AHTPGM
Trigger: CATGCCAGGGGTGTGTGCGCACCTCCCCGGCCCTGG...CCAGCATGCATCCTGGCCCACGGCCTGAGCAAGCTGCAGCCCTTCTGAGGCCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276416.11
CDS-3UTR CCA 90 bp CGCTCCAGAAGGTGGGCCAGGGCCGGGGAGGTGCGCACACACCCCTGGCATGCTAGCTTGCTCAGGCCGTaGGCCAGGATGCATGCTGGA +
Preference number: 4 (lower is better)
Translates to: RSRRWARAGEVRTHPWHASLLRP*ARMHAG
Trigger: TCCAGCATGCATCCTGGCCCACGGCCTGAGCAAGCT...AGCATGCCAGGGGTGTGTGCGCACCTCCCCGGCCCTGGCCCACCTTCTGGAGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276416.11
CDS-3UTR TCA 90 bp CGCCTCTGCTGGACCACGGTGCAGTTCGCTCCAGAAGGTGGGCCAGGGCCGGGGCCTGGCTGGTCAAGCTaGTGGGACAGGTCTCCAAAG +
Preference number: 4 (lower is better)
Translates to: RLCWTTVQFAPEGGPGPGPGWSS*WDRSPK
Trigger: CTTTGGAGACCTGTCCCATCAGCTTGACCAGCCAGG...CCCCGGCCCTGGCCCACCTTCTGGAGCGAACTGCACCGTGGTCCAGCAGAGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276416.11
CDS-3UTR GCA 90 bp AAGGGCTGCAGCTTGCTCAGGCCGTGGGCCAGGATGCATGCTGGACGGTTCTCCTCCCGAACCTGCGTCTaGCGCCGGGGTCCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: KGCSLLRPWARMHAGRFSSRTCV*RRGPQP
Trigger: TGGCTGAGGACCCCGGCGGCAGACGCAGGTTCGGGA...GGAGAACCGTCCAGCATGCATCCTGGCCCACGGCCTGAGCAAGCTGCAGCCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276416.11
ENST00000519513.5
CDS-3UTR GCA 90 bp GCTGCTCCGTGGAGGGCAGCAGGCCCAGGAAGGGGTTTCCTCTGCTCGCCTAAGTCATGGTCCCGAACCTaGGTCTGCCGCCGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: AAPWRAAGPGRGFLCSPKSWSRT*VCRRGP
Trigger: AGGACCCCGGCGGCAGACGCAGGTTCGGGACCATGA...CTTAGGCGAGCAGAGGAAACCCCTTCCTGGGCCTGCTGCCCTCCACGGAGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276416.11
CDS-3UTR CCA 90 bp GGACCACGGTGCAGTTCGCTCCAGAAGGTGGGCCAGGGCCGGGGAGGTGCGCACGAGCTTGGCCAGCACTaGCCCCGTCTTCTCCTTTTC +
Preference number: 4 (lower is better)
Translates to: GPRCSSLQKVGQGRGGAHELGQH*PRLLLF
Trigger: GAAAAGGAGAAGACGGGGCCAGTGCTGGCCAAGCTC...GTGCGCACCTCCCCGGCCCTGGCCCACCTTCTGGAGCGAACTGCACCGTGGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000276416.11
CDS-3UTR CCA 90 bp ATGGCCTCAGAAGGGCTGCAGCTTGCTCAGGCCGTGGGCCAGGATGCATGCTGGGGTGCTGCTGCTCCGTaGAGGGCAGCAGGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: MASEGLQLAQAVGQDACWGAAAP*RAAGPG
Trigger: TCCTGGGCCTGCTGCCCTCCACGGAGCAGCAGCACC...CCAGCATGCATCCTGGCCCACGGCCTGAGCAAGCTGCAGCCCTTCTGAGGCCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276416.11
CDS-3UTR CCA 90 bp GGCCCTCAGAGAGAGCAGCAGTGGACGATGCAACGCTGCAGGTCCACACCGGCCCTGCTGCTGGAGGGCTaGCCCTCGGTGCAATGGCAG +
Preference number: 4 (lower is better)
Translates to: GPQREQQWTMQRCRSTPALLLEG*PSVQWQ
Trigger: CTGCCATTGCACCGAGGGCCAGCCCTCCAGCAGCAG...GGCCGGTGTGGACCTGCAGCGTTGCATCGTCCACTGCTGCTCTCTCTGAGGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520292.1
CDS-3UTR TCA 90 bp CATGGCCTCAGAAGGGCTGCAGCTTGCTCAGGCCGTGGGCCAGGATGCATGCTGGGGCCCGGAGCTCACTaGGTTTGGCCTCGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: HGLRRAAACSGRGPGCMLGPGAH*VWPRSP
Trigger: GGGAGAACGAGGCCAAACTCAGTGAGCTCCGGGCCC...CAGCATGCATCCTGGCCCACGGCCTGAGCAAGCTGCAGCCCTTCTGAGGCCATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR GCA 90 bp CATGGCCTCAGAAGGGCTGCAGCTTGCTCAGGCCGTGGGCCAGGATGCATGCTGCCGCAGCTCCTCTCGTaGCTGGTGGAGCTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: HGLRRAAACSGRGPGCMLPQLLS*LVELGQ
Trigger: CTGGCCAAGCTCCACCAGGCACGAGAGGAGCTGCGG...CAGCATGCATCCTGGCCCACGGCCTGAGCAAGCTGCAGCCCTTCTGAGGCCATG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR GCA 90 bp AAGGGCTGCAGCTTGCTCAGGCCGTGGGCCAGGATGCATGCTGGACGGTTCTCCTTCTCCCGCTCCCGCTaGTCATCGGAGTGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: KGCSLLRPWARMHAGRFSFSRSR*SSEWPG
Trigger: GCCAGGCCACTCCGATGAGCAGCGGGAGCGGGAGAA...GGAGAACCGTCCAGCATGCATCCTGGCCCACGGCCTGAGCAAGCTGCAGCCCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR GCA 90 bp ATGGCCTCAGAAGGGCTGCAGCTTGCTCAGGCCGTGGGCCAGGATGCATGCTGGTTCTCCCGCTCCCGCTaGTCATCGGAGTGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: MASEGLQLAQAVGQDACWFSRSR*SSEWPG
Trigger: GCCAGGCCACTCCGATGAGCAGCGGGAGCGGGAGAA...CCAGCATGCATCCTGGCCCACGGCCTGAGCAAGCTGCAGCCCTTCTGAGGCCAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR CCA 90 bp GGAGACGGCGGCCTGCCTAGGGCTCCTGGTGCCAGGCTCAGGAAGAGTCATTCAGTCTTGCTGGGAAGCTaGCTGAGGGCCTGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: GDGGLPRAPGARLRKSHSVLLGS*LRACQG
Trigger: GCCCTGGCAGGCCCTCAGCCAGCTTCCCAGCAAGAC...TGAATGACTCTTCCTGAGCCTGGCACCAGGAGCCCTAGGCAGGCCGCCGTCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR CCA 90 bp GAGTGGCCCTCAGAGAGAGCAGCAGTGGACGATGCAACGCTGCAGGTCCACACCTCTCGCTGCTGCTGCTaGAGGGCTGGCCCTCGGTGC +
Preference number: 4 (lower is better)
Translates to: EWPSERAAVDDATLQVHTSRCCC*RAGPRC
Trigger: GCACCGAGGGCCAGCCCTCCAGCAGCAGCAGCGAGA...GGTGTGGACCTGCAGCGTTGCATCGTCCACTGCTGCTCTCTCTGAGGGCCACTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520292.1
3UTR CAA 72 bp AGCCAACGAAGCCCATGGCCTCAGAAGGGCTGCAGCTaGCTCAGGCCGTGGGCCAGGATGCATGCTGGACGG +
Preference number: 4 (lower is better)
Translates to: SQRSPWPQKGCS*LRPWARMHAGR
Trigger: CCGTCCAGCATGCATCCTGGCCCACGGCCTGAGCAAGCTGCAGCCCTTCTGAGGCCATGGGCTTCGTTGGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
3UTR CAA 72 bp AGTGTGTCCTCCACAGCTCTTCCTACTCTCCTAGGCTaGCCCGCGTGCCCTCCCACCCAGCGCCTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SVSSTALPTLLG*PACPPTQRLCW
Trigger: CCAGCAGAGGCGCTGGGTGGGAGGGCACGCGGGCAAGCCTAGGAGAGTAGGAAGAGCTGTGGAGGACACACT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276416.11
CDS-3UTR TCA 90 bp AAGGGCTGCAGCTTGCTCAGGCCGTGGGCCAGGATGCATGCTGGACGGTTCTCCCAAAGGGCCGGCAAGTaGACCAGGGCCACCTCTGTC +
Preference number: 4 (lower is better)
Translates to: KGCSLLRPWARMHAGRFSQRAGK*TRATSV
Trigger: GACAGAGGTGGCCCTGGTTCACTTGCCGGCCCTTTG...GGAGAACCGTCCAGCATGCATCCTGGCCCACGGCCTGAGCAAGCTGCAGCCCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR GCA 90 bp CAGCAGTGGACGATGCAACGCTGCAGGTCCACACCGGCCTCGTCTTTGTGGATCTCCCGAACCTGCGTCTaGCGCCGGGGTCCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: QQWTMQRCRSTPASSLWISRTCV*RRGPQP
Trigger: TGGCTGAGGACCCCGGCGGCAGACGCAGGTTCGGGA...GATCCACAAAGACGAGGCCGGTGTGGACCTGCAGCGTTGCATCGTCCACTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520292.1
CDS-3UTR GCA 90 bp CGCTCCAGAAGGTGGGCCAGGGCCGGGGAGGTGCGCACACACCCCTGGCATGCTGGAAGGGGTTTCCTCTaGTCGCCTAAGTTACAGCAC +
Preference number: 4 (lower is better)
Translates to: RSRRWARAGEVRTHPWHAGRGFL*SPKLQH
Trigger: GTGCTGTAACTTAGGCGAGCAGAGGAAACCCCTTCC...AGCATGCCAGGGGTGTGTGCGCACCTCCCCGGCCCTGGCCCACCTTCTGGAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000276416.11
CDS-3UTR CCA 90 bp AGAAGGGCTGCAGCTTGCTCAGGCCGTGGGCCAGGATGCATGCTGGACGGTTCTGTGCCTGGTGGAGCTTaGCCAGCACTGGCCCCGTCT +
Preference number: 4 (lower is better)
Translates to: RRAAACSGRGPGCMLDGSVPGGA*PALAPS
Trigger: AGACGGGGCCAGTGCTGGCCAAGCTCCACCAGGCAC...AGAACCGTCCAGCATGCATCCTGGCCCACGGCCTGAGCAAGCTGCAGCCCTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR CCA 90 bp CCCAACTTAGCCAACGAAGCCCATGGCCTCAGAAGGGCTGCAGCTTGCTCAGGCTGCTGGGGCTGTGAGTaGGGAGACGGCGGCCTGCCT +
Preference number: 4 (lower is better)
Translates to: PNLANEAHGLRRAAACSGCWGCE*GDGGLP
Trigger: AGGCAGGCCGCCGTCTCCCCACTCACAGCCCCAGCA...GCCTGAGCAAGCTGCAGCCCTTCTGAGGCCATGGGCTTCGTTGGCTAAGTTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR TCA 90 bp AGAAGGGCTGCAGCTTGCTCAGGCCGTGGGCCAGGATGCATGCTGGACGGTTCTCAAAGGGCCGGCAAGTaGACCAGGGCCACCTCTGTC +
Preference number: 4 (lower is better)
Translates to: RRAAACSGRGPGCMLDGSQRAGK*TRATSV
Trigger: GACAGAGGTGGCCCTGGTTCACTTGCCGGCCCTTTG...AGAACCGTCCAGCATGCATCCTGGCCCACGGCCTGAGCAAGCTGCAGCCCTTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR TCA 90 bp ATGGCCTCAGAAGGGCTGCAGCTTGCTCAGGCCGTGGGCCAGGATGCATGCTGGGGTACCAGTCCTCAGTaGCCTCGGGAACCCCAACCA +
Preference number: 4 (lower is better)
Translates to: MASEGLQLAQAVGQDACWGTSPQ*PREPQP
Trigger: TGGTTGGGGTTCCCGAGGTCACTGAGGACTGGTACC...CCAGCATGCATCCTGGCCCACGGCCTGAGCAAGCTGCAGCCCTTCTGAGGCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR TCA 90 bp GGAGACGGCGGCCTGCCTAGGGCTCCTGGTGCCAGGCTCAGGAAGAGTCATTCAGGTACCAGTCCTCAGTaGCCTCGGGAACCCCAACCA +
Preference number: 4 (lower is better)
Translates to: GDGGLPRAPGARLRKSHSGTSPQ*PREPQP
Trigger: TGGTTGGGGTTCCCGAGGTCACTGAGGACTGGTACC...TGAATGACTCTTCCTGAGCCTGGCACCAGGAGCCCTAGGCAGGCCGCCGTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR GCA 90 bp GGAGACGGCGGCCTGCCTAGGGCTCCTGGTGCCAGGCTCAGGAAGAGTCATTCAAGTAGTCGAGGCGGCTaGCGTAGAAGCGCGGCATCT +
Preference number: 4 (lower is better)
Translates to: GDGGLPRAPGARLRKSHSSSRGG*RRSAAS
Trigger: AGATGCCGCGCTTCTACGGCAGCCGCCTCGACTACT...TGAATGACTCTTCCTGAGCCTGGCACCAGGAGCCCTAGGCAGGCCGCCGTCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR GCA 90 bp CGGGAACCCCAACCACTTAGGTCCCAAAGCCACAAGGGTGCCCTTTGTCTTGCTGGGGAGACGGCGGCCTaGCTAGGGCTCCTGGTGCCA +
Preference number: 4 (lower is better)
Translates to: REPQPLRSQSHKGALCLAGETAA*LGLLVP
Trigger: TGGCACCAGGAGCCCTAGGCAGGCCGCCGTCTCCCC...AGCAAGACAAAGGGCACCCTTGTGGCTTTGGGACCTAAGTGGTTGGGGTTCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR GCA 90 bp CCCCAACCACTTAGGTCCCAAAGCCACAAGGGTGCCCTTTGTCTTGCTGGGAAGGGGGAGACGGCGGCCTaGCTAGGGCTCCTGGTGCCA +
Preference number: 4 (lower is better)
Translates to: PQPLRSQSHKGALCLAGKGETAA*LGLLVP
Trigger: TGGCACCAGGAGCCCTAGGCAGGCCGCCGTCTCCCC...CTTCCCAGCAAGACAAAGGGCACCCTTGTGGCTTTGGGACCTAAGTGGTTGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR GCA 90 bp TGGCCCTCAGAGAGAGCAGCAGTGGACGATGCAACGCTGCAGGTCCACACCGGCTGTCCAGGATCAGGCTaGGCAGCCCAGGGAGCTCAT +
Preference number: 4 (lower is better)
Translates to: WPSERAAVDDATLQVHTGCPGSG*AAQGAH
Trigger: ATGAGCTCCCTGGGCTGCGCAGCCTGATCCTGGACA...GCCGGTGTGGACCTGCAGCGTTGCATCGTCCACTGCTGCTCTCTCTGAGGGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520292.1
CDS-3UTR CCA 90 bp CATGGCCTCAGAAGGGCTGCAGCTTGCTCAGGCCGTGGGCCAGGATGCATGCTGCATCCATCCGCTTCATaGCCGTGTCCAGGGCCGTCA +
Preference number: 4 (lower is better)
Translates to: HGLRRAAACSGRGPGCMLHPSAS*PCPGPS
Trigger: TGACGGCCCTGGACACGGCCATGAAGCGGATGGATG...CAGCATGCATCCTGGCCCACGGCCTGAGCAAGCTGCAGCCCTTCTGAGGCCATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR CCA 90 bp CATGGCCTCAGAAGGGCTGCAGCTTGCTCAGGCCGTGGGCCAGGATGCATGCTGAGTCATCGGCCACAATaGAGAGGGCCCGGAGCTCAC +
Preference number: 4 (lower is better)
Translates to: HGLRRAAACSGRGPGCMLSHRPQ*RGPGAH
Trigger: GTGAGCTCCGGGCCCTCTCCATTGTGGCCGATGACT...CAGCATGCATCCTGGCCCACGGCCTGAGCAAGCTGCAGCCCTTCTGAGGCCATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR CCA 90 bp ATGGCCTCAGAAGGGCTGCAGCTTGCTCAGGCCGTGGGCCAGGATGCATGCTGGAGTCATCGGCCACAATaGAGAGGGCCCGGAGCTCAC +
Preference number: 4 (lower is better)
Translates to: MASEGLQLAQAVGQDACWSHRPQ*RGPGAH
Trigger: GTGAGCTCCGGGCCCTCTCCATTGTGGCCGATGACT...CCAGCATGCATCCTGGCCCACGGCCTGAGCAAGCTGCAGCCCTTCTGAGGCCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR CCA 90 bp TCCACTGTGACTAGAAGGGACCGCGTGGGAGACTCAGAGGAGTGGCCCTCAGAGTGGCCCTCGGTGCAATaGCAGGGGGCGTCTACCAGG +
Preference number: 4 (lower is better)
Translates to: STVTRRDRVGDSEEWPSEWPSVQ*QGASTR
Trigger: CCTGGTAGACGCCCCCTGCCATTGCACCGAGGGCCA...CTCTGAGGGCCACTCCTCTGAGTCTCCCACGCGGTCCCTTCTAGTCACAGTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520292.1
CDS-3UTR TCA 90 bp AACTTAGCCAACGAAGCCCATGGCCTCAGAAGGGCTGCAGCTTGCTCAGGCCGTGGGCCCGGAGCTCACTaGGTTTGGCCTCGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: NLANEAHGLRRAAACSGRGPGAH*VWPRSP
Trigger: GGGAGAACGAGGCCAAACTCAGTGAGCTCCGGGCCC...ACGGCCTGAGCAAGCTGCAGCCCTTCTGAGGCCATGGGCTTCGTTGGCTAAGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR TCA 90 bp GACGATGCAACGCTGCAGGTCCACACCGGCCTCGTCTTTGTGGATCATGTGTCCGGAGCAGTGCTCTCCTaGGGCTCTCGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: DDATLQVHTGLVFVDHVSGAVLS*GSRCCC
Trigger: GCAGCAGCAGCGAGAGCCTCAGGAGAGCACTGCTCC...GGACACATGATCCACAAAGACGAGGCCGGTGTGGACCTGCAGCGTTGCATCGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520292.1
CDS-3UTR GCA 90 bp CAGTGGACGATGCAACGCTGCAGGTCCACACCGGCCTCGTCTTTGTGGATCATGTCATGGTCCCGAACCTaGGTCTGCCGCCGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: QWTMQRCRSTPASSLWIMSWSRT*VCRRGP
Trigger: AGGACCCCGGCGGCAGACGCAGGTTCGGGACCATGA...CATGATCCACAAAGACGAGGCCGGTGTGGACCTGCAGCGTTGCATCGTCCACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520292.1
CDS-3UTR GCA 90 bp CCACGGTGCAGTTCGCTCCAGAAGGTGGGCCAGGGCCGGGGAGGTGCGCACACACCAGGTCTGCGTCGGTaGTCTTCTTCATGTCTTTCT +
Preference number: 4 (lower is better)
Translates to: PRCSSLQKVGQGRGGAHTPGLRR*SSSCLS
Trigger: AGAAAGACATGAAGAAGAGCACCGACGCAGACCTGG...TGTGTGCGCACCTCCCCGGCCCTGGCCCACCTTCTGGAGCGAACTGCACCGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276416.11
CDS-3UTR GCA 90 bp AACTTAGCCAACGAAGCCCATGGCCTCAGAAGGGCTGCAGCTTGCTCAGGCCGTTTCTCCCGCTCCCGCTaGTCATCGGAGTGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: NLANEAHGLRRAAACSGRFSRSR*SSEWPG
Trigger: GCCAGGCCACTCCGATGAGCAGCGGGAGCGGGAGAA...ACGGCCTGAGCAAGCTGCAGCCCTTCTGAGGCCATGGGCTTCGTTGGCTAAGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR GCA 90 bp CTGGTGCCAGGCTCAGGAAGAGTCATTCATTGCAAAGGGCCGGCAAGTGAACCAGGGGAGACGGCGGCCTaGCTAGGGCTCCTGGTGCCA +
Preference number: 4 (lower is better)
Translates to: LVPGSGRVIHCKGPASEPGETAA*LGLLVP
Trigger: TGGCACCAGGAGCCCTAGGCAGGCCGCCGTCTCCCC...TGGTTCACTTGCCGGCCCTTTGCAATGAATGACTCTTCCTGAGCCTGGCACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR GCA 90 bp GGCCAGAGGGCTCCCCAGGATGGGTCTTTTGGAGGTAGATTTGATGCCCACAACGCTGGAGGGTGCTGCTaGTCCGTGGAGGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: GQRAPQDGSFGGRFDAHNAGGCC*SVEGSR
Trigger: CCTGCTGCCCTCCACGGAGCAGCAGCACCCTCCAGC...GTTGTGGGCATCAAATCTACCTCCAAAAGACCCATCCTGGGGAGCCCTCTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276416.11
CDS-3UTR GCA 90 bp ACCCCCAACTTAGCCAACGAAGCCCATGGCCTCAGAAGGGCTGCAGCTTGCTCAGCATGCTGGGCTGCCTaGTGGAGGGTGCTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: TPNLANEAHGLRRAAACSACWAA*WRVLLL
Trigger: GAGCAGCAGCACCCTCCAGCAGGCAGCCCAGCATGC...TGAGCAAGCTGCAGCCCTTCTGAGGCCATGGGCTTCGTTGGCTAAGTTGGGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276416.11
CDS-3UTR GCA 90 bp CAGTGGACGATGCAACGCTGCAGGTCCACACCGGCCTCGTCTTTGTGGATCATGAGGGCTGGCCCTCGGTaGAATGGCAGGGGGCGTCTA +
Preference number: 4 (lower is better)
Translates to: QWTMQRCRSTPASSLWIMRAGPR*NGRGRL
Trigger: TAGACGCCCCCTGCCATTGCACCGAGGGCCAGCCCT...CATGATCCACAAAGACGAGGCCGGTGTGGACCTGCAGCGTTGCATCGTCCACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520292.1
CDS-3UTR CCA 90 bp CATGGCCTCAGAAGGGCTGCAGCTTGCTCAGGCCGTGGGCCAGGATGCATGCTGCGGCAGATTTTGACATaGCCAGGTCTGCGTCGGTGC +
Preference number: 4 (lower is better)
Translates to: HGLRRAAACSGRGPGCMLRQILT*PGLRRC
Trigger: GCACCGACGCAGACCTGGCCATGTCAAAATCTGCCG...CAGCATGCATCCTGGCCCACGGCCTGAGCAAGCTGCAGCCCTTCTGAGGCCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276416.11
CDS-3UTR CCA 90 bp ATGGCCTCAGAAGGGCTGCAGCTTGCTCAGGCCGTGGGCCAGGATGCATGCTGGGAGCTTGGCCAGCACTaGCCCCGTCTTCTCCTTTTC +
Preference number: 4 (lower is better)
Translates to: MASEGLQLAQAVGQDACWELGQH*PRLLLF
Trigger: GAAAAGGAGAAGACGGGGCCAGTGCTGGCCAAGCTC...CCAGCATGCATCCTGGCCCACGGCCTGAGCAAGCTGCAGCCCTTCTGAGGCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR CCA 90 bp GGAGACGGCGGCCTGCCTAGGGCTCCTGGTGCCAGGCTCAGGAAGAGTCATTCAGAGCTTGGCCAGCACTaGCCCCGTCTTCTCCTTTTC +
Preference number: 4 (lower is better)
Translates to: GDGGLPRAPGARLRKSHSELGQH*PRLLLF
Trigger: GAAAAGGAGAAGACGGGGCCAGTGCTGGCCAAGCTC...TGAATGACTCTTCCTGAGCCTGGCACCAGGAGCCCTAGGCAGGCCGCCGTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR CCA 90 bp CCACTTAGGTCCCAAAGCCACAAGGGTGCCCTTTGTCTTGCTGGGAAGCTGGCTAGGGCCTGCCAGGGCTaGAGGACCAGCTCTCCCGCA +
Preference number: 4 (lower is better)
Translates to: PLRSQSHKGALCLAGKLARACQG*RTSSPA
Trigger: TGCGGGAGAGCTGGTCCTCCAGCCCTGGCAGGCCCT...AGCCAGCTTCCCAGCAAGACAAAGGGCACCCTTGTGGCTTTGGGACCTAAGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR CCA 90 bp CCCCAACCACTTAGGTCCCAAAGCCACAAGGGTGCCCTTTGTCTTGCTGGGAAGAGGGCCTGCCAGGGCTaGAGGACCAGCTCTCCCGCA +
Preference number: 4 (lower is better)
Translates to: PQPLRSQSHKGALCLAGKRACQG*RTSSPA
Trigger: TGCGGGAGAGCTGGTCCTCCAGCCCTGGCAGGCCCT...CTTCCCAGCAAGACAAAGGGCACCCTTGTGGCTTTGGGACCTAAGTGGTTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR TCA 90 bp GTGCCAGGCTCAGGAAGAGTCATTCATTGCAAAGGGCCGGCAAGTGAACCAGGGGGGCCCGGAGCTCACTaGGTTTGGCCTCGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: VPGSGRVIHCKGPASEPGGPGAH*VWPRSP
Trigger: GGGAGAACGAGGCCAAACTCAGTGAGCTCCGGGCCC...CCCTGGTTCACTTGCCGGCCCTTTGCAATGAATGACTCTTCCTGAGCCTGGCAC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR GCA 90 bp GAGGTTCTAGATCCGCATAAGCAGGAAGAAGGCCCAGGTTGCTGTCTTCCCAGCTCCCGAACCTGCGTCTaGCGCCGGGGTCCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: EVLDPHKQEEGPGCCLPSSRTCV*RRGPQP
Trigger: TGGCTGAGGACCCCGGCGGCAGACGCAGGTTCGGGA...GCTGGGAAGACAGCAACCTGGGCCTTCTTCCTGCTTATGCGGATCTAGAACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522268.1
CDS-3UTR GCA 90 bp AACTTAGCCAACGAAGCCCATGGCCTCAGAAGGGCTGCAGCTTGCTCAGGCCGTGGCCGTGGGCCAGGATaGATGCTGGACGGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: NLANEAHGLRRAAACSGRGRGPG*MLDGSP
Trigger: TGGAGAACCGTCCAGCATGCATCCTGGCCCACGGCC...ACGGCCTGAGCAAGCTGCAGCCCTTCTGAGGCCATGGGCTTCGTTGGCTAAGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR GCA 90 bp TTCTTGTGGGACAGTTCCACTGACAGCTTGCGTTCCCGAGGTACCAGTCCTCAGCCTGCTGGAGGGTGCTaGTGCTCCGTGGAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: FLWDSSTDSLRSRGTSPQPAGGC*CSVEGS
Trigger: GCTGCCCTCCACGGAGCAGCAGCACCCTCCAGCAGG...CTGAGGACTGGTACCTCGGGAACGCAAGCTGTCAGTGGAACTGTCCCACAAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276416.11
CDS-3UTR GCA 90 bp CTGGTGCCAGGCTCAGGAAGAGTCATTCATTGCAAAGGGCCGGCAAGTGAACCACTGCCTGCTGGAGGGTaGTGCTGCTCCGTGGAGGGC +
Preference number: 4 (lower is better)
Translates to: LVPGSGRVIHCKGPASEPLPAGG*CCSVEG
Trigger: GCCCTCCACGGAGCAGCAGCACCCTCCAGCAGGCAG...TGGTTCACTTGCCGGCCCTTTGCAATGAATGACTCTTCCTGAGCCTGGCACCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276416.11
CDS-3UTR GCA 90 bp TGCAAGGCTAAGACCCCCAACTTAGCCAACGAAGCCCATGGCCTCAGAAGGGCTCACACACCCCTGGCATaGTGGGCTGCCTGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: CKAKTPNLANEAHGLRRAHTPLA*WAACWR
Trigger: CCTCCAGCAGGCAGCCCAGCATGCCAGGGGTGTGTG...AGCCCTTCTGAGGCCATGGGCTTCGTTGGCTAAGTTGGGGGTCTTAGCCTTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276416.11
CDS-3UTR CCA 90 bp CGCTCCAGAAGGTGGGCCAGGGCCGGGGAGGTGCGCACACACCCCTGGCATGCTCTCTCTCCACTGTTTTaGGCACAATCTGTTTCTTGG +
Preference number: 4 (lower is better)
Translates to: RSRRWARAGEVRTHPWHALSPLF*AQSVSW
Trigger: CCAAGAAACAGATTGTGCCCAAAACAGTGGAGAGAG...AGCATGCCAGGGGTGTGTGCGCACCTCCCCGGCCCTGGCCCACCTTCTGGAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000276416.11
CDS-3UTR CCA 90 bp CTTAGGTCCCAAAGCCACAAGGGTGCCCTTTGTCTTGCTGGGAAGCTGGCTGAGGTCTTGCTGGGAAGCTaGCTGAGGGCCTGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: LRSQSHKGALCLAGKLAEVLLGS*LRACQG
Trigger: GCCCTGGCAGGCCCTCAGCCAGCTTCCCAGCAAGAC...CTCAGCCAGCTTCCCAGCAAGACAAAGGGCACCCTTGTGGCTTTGGGACCTAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR CCA 90 bp TGTGGGACAGTTCCACTGACAGCTTGCGTTCCCGAGGTACCAGTCCTCAGTGACGTCTTGCTGGGAAGCTaGCTGAGGGCCTGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: CGTVPLTACVPEVPVLSDVLLGS*LRACQG
Trigger: GCCCTGGCAGGCCCTCAGCCAGCTTCCCAGCAAGAC...GTCACTGAGGACTGGTACCTCGGGAACGCAAGCTGTCAGTGGAACTGTCCCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR TCA 90 bp CCCCAACCACTTAGGTCCCAAAGCCACAAGGGTGCCCTTTGTCTTGCTGGGAAGCAAAGGGCCGGCAAGTaGACCAGGGCCACCTCTGTC +
Preference number: 4 (lower is better)
Translates to: PQPLRSQSHKGALCLAGKQRAGK*TRATSV
Trigger: GACAGAGGTGGCCCTGGTTCACTTGCCGGCCCTTTG...CTTCCCAGCAAGACAAAGGGCACCCTTGTGGCTTTGGGACCTAAGTGGTTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR GCA 90 bp AAGGATATCTTCACGGCAGATTTTGACATGGCCGGGCATGGTGGTGGTGACGGCTCATGGTCCCGAACCTaGGTCTGCCGCCGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: KDIFTADFDMAGHGGGDGSWSRT*VCRRGP
Trigger: AGGACCCCGGCGGCAGACGCAGGTTCGGGACCATGA...GCCGTCACCACCACCATGCCCGGCCATGTCAAAATCTGCCGTGAAGATATCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522687.5
CDS-3UTR GCA 90 bp GTGCCAGGCTCAGGAAGAGTCATTCATTGCAAAGGGCCGGCAAGTGAACCAGGGGGCCGTGGGCCAGGATaGATGCTGGACGGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: VPGSGRVIHCKGPASEPGGRGPG*MLDGSP
Trigger: TGGAGAACCGTCCAGCATGCATCCTGGCCCACGGCC...CCCTGGTTCACTTGCCGGCCCTTTGCAATGAATGACTCTTCCTGAGCCTGGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR GCA 90 bp GGCCAGAGGGCTCCCCAGGATGGGTCTTTTGGAGGTAGATTTGATGCCCACAACGGCCGTGGGCCAGGATaGATGCTGGACGGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: GQRAPQDGSFGGRFDAHNGRGPG*MLDGSP
Trigger: TGGAGAACCGTCCAGCATGCATCCTGGCCCACGGCC...GTTGTGGGCATCAAATCTACCTCCAAAAGACCCATCCTGGGGAGCCCTCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR GCA 90 bp CACTTAGGTCCCAAAGCCACAAGGGTGCCCTTTGTCTTGCTGGGAAGCTGGCTGTGGCCTCAGAAGGGCTaGAGCTTGCTCAGGCCGTGG +
Preference number: 4 (lower is better)
Translates to: HLGPKATRVPFVLLGSWLWPQKG*SLLRPW
Trigger: CCACGGCCTGAGCAAGCTGCAGCCCTTCTGAGGCCA...CAGCCAGCTTCCCAGCAAGACAAAGGGCACCCTTGTGGCTTTGGGACCTAAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR GCA 90 bp CCACTTAGGTCCCAAAGCCACAAGGGTGCCCTTTGTCTTGCTGGGAAGCTGGCTTGGCCTCAGAAGGGCTaGAGCTTGCTCAGGCCGTGG +
Preference number: 4 (lower is better)
Translates to: PLRSQSHKGALCLAGKLAWPQKG*SLLRPW
Trigger: CCACGGCCTGAGCAAGCTGCAGCCCTTCTGAGGCCA...AGCCAGCTTCCCAGCAAGACAAAGGGCACCCTTGTGGCTTTGGGACCTAAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR GCA 90 bp CCCAACTTAGCCAACGAAGCCCATGGCCTCAGAAGGGCTGCAGCTTGCTCAGGCTCTGCTGGACCACGGTaGAGTTCGCTCCAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: PNLANEAHGLRRAAACSGSAGPR*SSLQKV
Trigger: CACCTTCTGGAGCGAACTGCACCGTGGTCCAGCAGA...GCCTGAGCAAGCTGCAGCCCTTCTGAGGCCATGGGCTTCGTTGGCTAAGTTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276416.11
CDS-3UTR GCA 90 bp AGTGGACGATGCAACGCTGCAGGTCCACACCGGCCTCGTCTTTGTGGATCATGTTGGACGATGCAACGCTaGAGGTCCACACCGGCCTCG +
Preference number: 4 (lower is better)
Translates to: SGRCNAAGPHRPRLCGSCWTMQR*RSTPAS
Trigger: CGAGGCCGGTGTGGACCTGCAGCGTTGCATCGTCCA...ACATGATCCACAAAGACGAGGCCGGTGTGGACCTGCAGCGTTGCATCGTCCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520292.1
CDS-3UTR GCA 90 bp AGAGAGAGCAGCAGTGGACGATGCAACGCTGCAGGTCCACACCGGCCTCGTCTTAGCAGCAGTGGACGATaGAACGCTGCAGGTCCACAC +
Preference number: 4 (lower is better)
Translates to: RESSSGRCNAAGPHRPRLSSSGR*NAAGPH
Trigger: GTGTGGACCTGCAGCGTTGCATCGTCCACTGCTGCT...AAGACGAGGCCGGTGTGGACCTGCAGCGTTGCATCGTCCACTGCTGCTCTCTCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520292.1
CDS-3UTR GCA 90 bp TCACGGCAGATTTTGACATGGCCGGGCATGGTGGTGGTGACGGCGGCTCCCAGGCTTAGGAGCCAGGTCTaGGTCGGTGCTCTTCTTCAT +
Preference number: 4 (lower is better)
Translates to: SRQILTWPGMVVVTAAPRLRSQV*VGALLH
Trigger: ATGAAGAAGAGCACCGACGCAGACCTGGCTCCTAAG...CCTGGGAGCCGCCGTCACCACCACCATGCCCGGCCATGTCAAAATCTGCCGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522687.5
CDS-3UTR CCA 90 bp AAGGCATCCATCCGCTTCATGGCCGTGTCCAGGGCCGTCACCATGTTCAGAAGGCATCCATCCGCTTCATaGCCGTGTCCAGGGCCGTCA +
Preference number: 4 (lower is better)
Translates to: KASIRFMAVSRAVTMFRRHPSAS*PCPGPS
Trigger: TGACGGCCCTGGACACGGCCATGAAGCGGATGGATG...CCTTCTGAACATGGTGACGGCCCTGGACACGGCCATGAAGCGGATGGATGCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522687.5
CDS-3UTR CCA 90 bp CACTTAGGTCCCAAAGCCACAAGGGTGCCCTTTGTCTTGCTGGGAAGCTGGCTGTCCTCTCGTGCCTGGTaGAGCTTGGCCAGCACTGGC +
Preference number: 4 (lower is better)
Translates to: HLGPKATRVPFVLLGSWLSSRAW*SLASTG
Trigger: GCCAGTGCTGGCCAAGCTCCACCAGGCACGAGAGGA...CAGCCAGCTTCCCAGCAAGACAAAGGGCACCCTTGTGGCTTTGGGACCTAAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR CCA 90 bp TGTGGGACAGTTCCACTGACAGCTTGCGTTCCCGAGGTACCAGTCCTCAGTGACTCCTCTCGTGCCTGGTaGAGCTTGGCCAGCACTGGC +
Preference number: 4 (lower is better)
Translates to: CGTVPLTACVPEVPVLSDSSRAW*SLASTG
Trigger: GCCAGTGCTGGCCAAGCTCCACCAGGCACGAGAGGA...GTCACTGAGGACTGGTACCTCGGGAACGCAAGCTGTCAGTGGAACTGTCCCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR CCA 90 bp AGAAGGGCTGCAGCTTGCTCAGGCCGTGGGCCAGGATGCATGCTGGACGGTTCTGCAGCTGCCTGTTCTTaGCTTCAAAGTCCTCCCGCA +
Preference number: 4 (lower is better)
Translates to: RRAAACSGRGPGCMLDGSAAACS*LQSPPA
Trigger: TGCGGGAGGACTTTGAAGCCAAGAACAGGCAGCTGC...AGAACCGTCCAGCATGCATCCTGGCCCACGGCCTGAGCAAGCTGCAGCCCTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR CCA 90 bp CCCAACTTAGCCAACGAAGCCCATGGCCTCAGAAGGGCTGCAGCTTGCTCAGGCCTCATCGGAGTGGCCTaGCTGGTCAAGCTGATGGGA +
Preference number: 4 (lower is better)
Translates to: PNLANEAHGLRRAAACSGLIGVA*LVKLMG
Trigger: TCCCATCAGCTTGACCAGCCAGGCCACTCCGATGAG...GCCTGAGCAAGCTGCAGCCCTTCTGAGGCCATGGGCTTCGTTGGCTAAGTTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR CCA 90 bp GGCCTGCCTAGGGCTCCTGGTGCCAGGCTCAGGAAGAGTCATTCATTGCAAAGGAGCCAACGAAGCCCATaGCCTCAGAAGGGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: GLPRAPGARLRKSHSLQRSQRSP*PQKGCS
Trigger: GCTGCAGCCCTTCTGAGGCCATGGGCTTCGTTGGCT...CCTTTGCAATGAATGACTCTTCCTGAGCCTGGCACCAGGAGCCCTAGGCAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR CCA 90 bp GGAGGTAGATTTGATGCCCACAACGCATGCAAGGCTAAGACCCCCAACTTAGCCAGGGCCTGCCAGGGCTaGAGGACCAGCTCTCCCGCA +
Preference number: 4 (lower is better)
Translates to: GGRFDAHNACKAKTPNLARACQG*RTSSPA
Trigger: TGCGGGAGAGCTGGTCCTCCAGCCCTGGCAGGCCCT...GGCTAAGTTGGGGGTCTTAGCCTTGCATGCGTTGTGGGCATCAAATCTACCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR TCA 90 bp TCAGAGGAGTGGCCCTCAGAGAGAGCAGCAGTGGACGATGCAACGCTGCAGGTCCTTCACGGCAGATTTTaGCATGGCCAGGTCTGCGTC +
Preference number: 4 (lower is better)
Translates to: SEEWPSERAAVDDATLQVLHGRF*HGQVCV
Trigger: GACGCAGACCTGGCCATGTCAAAATCTGCCGTGAAG...GACCTGCAGCGTTGCATCGTCCACTGCTGCTCTCTCTGAGGGCCACTCCTCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520292.1
CDS-3UTR TCA 90 bp GGCCCTCAGAGAGAGCAGCAGTGGACGATGCAACGCTGCAGGTCCACACCGGCCTCACCTTTTCCTGATTaGAGGCATCCATCCGCTTCA +
Preference number: 4 (lower is better)
Translates to: GPQREQQWTMQRCRSTPASPFPD*RHPSAS
Trigger: TGAAGCGGATGGATGCCTTCAATCAGGAAAAGGTGA...GGCCGGTGTGGACCTGCAGCGTTGCATCGTCCACTGCTGCTCTCTCTGAGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520292.1
CDS-3UTR TCA 90 bp TGCAAGGCTAAGACCCCCAACTTAGCCAACGAAGCCCATGGCCTCAGAAGGGCTGGTACCAGTCCTCAGTaGCCTCGGGAACCCCAACCA +
Preference number: 4 (lower is better)
Translates to: CKAKTPNLANEAHGLRRAGTSPQ*PREPQP
Trigger: TGGTTGGGGTTCCCGAGGTCACTGAGGACTGGTACC...AGCCCTTCTGAGGCCATGGGCTTCGTTGGCTAAGTTGGGGGTCTTAGCCTTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR TCA 90 bp TGTGGGACAGTTCCACTGACAGCTTGCGTTCCCGAGGTACCAGTCCTCAGTGACGTGGGACAGTTCCACTaGCAGCTTGCGTTCCCGAGG +
Preference number: 4 (lower is better)
Translates to: CGTVPLTACVPEVPVLSDVGQFH*QLAFPR
Trigger: CCTCGGGAACGCAAGCTGTCAGTGGAACTGTCCCAC...GTCACTGAGGACTGGTACCTCGGGAACGCAAGCTGTCAGTGGAACTGTCCCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR TCA 90 bp CCAGGCTCAGGAAGAGTCATTCATTGCAAAGGGCCGGCAAGTGAACCAGGGCCAGTGGGACAGTTCCACTaGCAGCTTGCGTTCCCGAGG +
Preference number: 4 (lower is better)
Translates to: PGSGRVIHCKGPASEPGPVGQFH*QLAFPR
Trigger: CCTCGGGAACGCAAGCTGTCAGTGGAACTGTCCCAC...TGGCCCTGGTTCACTTGCCGGCCCTTTGCAATGAATGACTCTTCCTGAGCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR TCA 90 bp TGCAAGGCTAAGACCCCCAACTTAGCCAACGAAGCCCATGGCCTCAGAAGGGCTGTGGGACAGTTCCACTaGCAGCTTGCGTTCCCGAGG +
Preference number: 4 (lower is better)
Translates to: CKAKTPNLANEAHGLRRAVGQFH*QLAFPR
Trigger: CCTCGGGAACGCAAGCTGTCAGTGGAACTGTCCCAC...AGCCCTTCTGAGGCCATGGGCTTCGTTGGCTAAGTTGGGGGTCTTAGCCTTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR TCA 90 bp GCAGTGGACGATGCAACGCTGCAGGTCCACACCGGCCTCGTCTTTGTGGATCATGTGGCCATTCGGAGGTaGCCCAGGACCAGAAGAGTT +
Preference number: 4 (lower is better)
Translates to: AVDDATLQVHTGLVFVDHVAIRR*PRTRRV
Trigger: AACTCTTCTGGTCCTGGGTCACCTCCGAATGGCCAC...ATGATCCACAAAGACGAGGCCGGTGTGGACCTGCAGCGTTGCATCGTCCACTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520292.1
CDS-3UTR GCA 90 bp GGAGGTAGATTTGATGCCCACAACGCATGCAAGGCTAAGACCCCCAACTTAGCCTCATGGTCCCGAACCTaGGTCTGCCGCCGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: GGRFDAHNACKAKTPNLASWSRT*VCRRGP
Trigger: AGGACCCCGGCGGCAGACGCAGGTTCGGGACCATGA...GGCTAAGTTGGGGGTCTTAGCCTTGCATGCGTTGTGGGCATCAAATCTACCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276416.11
ENST00000519513.5
CDS-3UTR GCA 90 bp ATGGCCTCAGAAGGGCTGCAGCTTGCTCAGGCCGTGGGCCAGGATGCATGCTGGTTCTTCATGTCTTTCTaGAGCCTCCGGGTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: MASEGLQLAQAVGQDACWFFMSF*SLRVCS
Trigger: AGAGCAGACCCGGAGGCTGCAGAAAGACATGAAGAA...CCAGCATGCATCCTGGCCCACGGCCTGAGCAAGCTGCAGCCCTTCTGAGGCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276416.11
CDS-3UTR GCA 90 bp TCACGGCAGATTTTGACATGGCCGGGCATGGTGGTGGTGACGGCGGCTCCCAGGCCAGGTCTGCGTCGGTaGTCTTCTTCATGTCTTTCT +
Preference number: 4 (lower is better)
Translates to: SRQILTWPGMVVVTAAPRPGLRR*SSSCLS
Trigger: AGAAAGACATGAAGAAGAGCACCGACGCAGACCTGG...CCTGGGAGCCGCCGTCACCACCACCATGCCCGGCCATGTCAAAATCTGCCGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522687.5
CDS-3UTR GCA 90 bp GGCCAGAGGGCTCCCCAGGATGGGTCTTTTGGAGGTAGATTTGATGCCCACAACAGTAGTCGAGGCGGCTaGCGTAGAAGCGCGGCATCT +
Preference number: 4 (lower is better)
Translates to: GQRAPQDGSFGGRFDAHNSSRGG*RRSAAS
Trigger: AGATGCCGCGCTTCTACGGCAGCCGCCTCGACTACT...GTTGTGGGCATCAAATCTACCTCCAAAAGACCCATCCTGGGGAGCCCTCTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR GCA 90 bp AGGGCTCCCCAGGATGGGTCTTTTGGAGGTAGATTTGATGCCCACAACGCATGCTGGCCTCAGAAGGGCTaGAGCTTGCTCAGGCCGTGG +
Preference number: 4 (lower is better)
Translates to: RAPQDGSFGGRFDAHNACWPQKG*SLLRPW
Trigger: CCACGGCCTGAGCAAGCTGCAGCCCTTCTGAGGCCA...GCATGCGTTGTGGGCATCAAATCTACCTCCAAAAGACCCATCCTGGGGAGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR GCA 90 bp CCCAACTTAGCCAACGAAGCCCATGGCCTCAGAAGGGCTGCAGCTTGCTCAGGCGTTCCACTGACAGCTTaGGTTCCCGAGGTACCAGTC +
Preference number: 4 (lower is better)
Translates to: PNLANEAHGLRRAAACSGVPLTA*VPEVPV
Trigger: GACTGGTACCTCGGGAACGCAAGCTGTCAGTGGAAC...GCCTGAGCAAGCTGCAGCCCTTCTGAGGCCATGGGCTTCGTTGGCTAAGTTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR GCA 90 bp GCAGTGGACGATGCAACGCTGCAGGTCCACACCGGCCTCGTCTTTGTGGATCATAGTGACCAGGAGCAGTaGTCTCCTGAGGCTCTCGCT +
Preference number: 4 (lower is better)
Translates to: AVDDATLQVHTGLVFVDHSDQEQ*SPEALA
Trigger: AGCGAGAGCCTCAGGAGAGCACTGCTCCTGGTCACT...ATGATCCACAAAGACGAGGCCGGTGTGGACCTGCAGCGTTGCATCGTCCACTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520292.1
CDS-3UTR CCA 90 bp GGAGACGGCGGCCTGCCTAGGGCTCCTGGTGCCAGGCTCAGGAAGAGTCATTCAATGTTCAGAAGGTCCTaGTCTTGCTCACAGAGGGGA +
Preference number: 4 (lower is better)
Translates to: GDGGLPRAPGARLRKSHSMFRRS*SCSQRG
Trigger: TCCCCTCTGTGAGCAAGACCAGGACCTTCTGAACAT...TGAATGACTCTTCCTGAGCCTGGCACCAGGAGCCCTAGGCAGGCCGCCGTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR CCA 90 bp CACTTAGGTCCCAAAGCCACAAGGGTGCCCTTTGTCTTGCTGGGAAGCTGGCTGCATCCATCCGCTTCATaGCCGTGTCCAGGGCCGTCA +
Preference number: 4 (lower is better)
Translates to: HLGPKATRVPFVLLGSWLHPSAS*PCPGPS
Trigger: TGACGGCCCTGGACACGGCCATGAAGCGGATGGATG...CAGCCAGCTTCCCAGCAAGACAAAGGGCACCCTTGTGGCTTTGGGACCTAAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR CCA 90 bp AGTGGACGATGCAACGCTGCAGGTCCACACCGGCCTCGTCTTTGTGGATCATGTCATCCATCCGCTTCATaGCCGTGTCCAGGGCCGTCA +
Preference number: 4 (lower is better)
Translates to: SGRCNAAGPHRPRLCGSCHPSAS*PCPGPS
Trigger: TGACGGCCCTGGACACGGCCATGAAGCGGATGGATG...ACATGATCCACAAAGACGAGGCCGGTGTGGACCTGCAGCGTTGCATCGTCCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520292.1
CDS-3UTR CCA 90 bp AATTCTTGTGGGACAGTTCCACTGACAGCTTGCGTTCCCGAGGTACCAGTCCTCGTGCCTGGTGGAGCTTaGCCAGCACTGGCCCCGTCT +
Preference number: 4 (lower is better)
Translates to: NSCGTVPLTACVPEVPVLVPGGA*PALAPS
Trigger: AGACGGGGCCAGTGCTGGCCAAGCTCCACCAGGCAC...GAGGACTGGTACCTCGGGAACGCAAGCTGTCAGTGGAACTGTCCCACAAGAATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR CCA 90 bp TTCTTGTGGGACAGTTCCACTGACAGCTTGCGTTCCCGAGGTACCAGTCCTCAGTCCTCTCGTGCCTGGTaGAGCTTGGCCAGCACTGGC +
Preference number: 4 (lower is better)
Translates to: FLWDSSTDSLRSRGTSPQSSRAW*SLASTG
Trigger: GCCAGTGCTGGCCAAGCTCCACCAGGCACGAGAGGA...CTGAGGACTGGTACCTCGGGAACGCAAGCTGTCAGTGGAACTGTCCCACAAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR CCA 90 bp AGAGTCATTCATTGCAAAGGGCCGGCAAGTGAACCAGGGCCACCTCTGTCCCCAAGCTCCTCTCGTGCCTaGTGGAGCTTGGCCAGCACT +
Preference number: 4 (lower is better)
Translates to: RVIHCKGPASEPGPPLSPSSSRA*WSLAST
Trigger: AGTGCTGGCCAAGCTCCACCAGGCACGAGAGGAGCT...TGGGGACAGAGGTGGCCCTGGTTCACTTGCCGGCCCTTTGCAATGAATGACTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR CCA 90 bp CCAGGCTCAGGAAGAGTCATTCATTGCAAAGGGCCGGCAAGTGAACCAGGGCCAAGCTCCTCTCGTGCCTaGTGGAGCTTGGCCAGCACT +
Preference number: 4 (lower is better)
Translates to: PGSGRVIHCKGPASEPGPSSSRA*WSLAST
Trigger: AGTGCTGGCCAAGCTCCACCAGGCACGAGAGGAGCT...TGGCCCTGGTTCACTTGCCGGCCCTTTGCAATGAATGACTCTTCCTGAGCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR CCA 90 bp CCCCAACCACTTAGGTCCCAAAGCCACAAGGGTGCCCTTTGTCTTGCTGGGAAGAGTCATCGGCCACAATaGAGAGGGCCCGGAGCTCAC +
Preference number: 4 (lower is better)
Translates to: PQPLRSQSHKGALCLAGKSHRPQ*RGPGAH
Trigger: GTGAGCTCCGGGCCCTCTCCATTGTGGCCGATGACT...CTTCCCAGCAAGACAAAGGGCACCCTTGTGGCTTTGGGACCTAAGTGGTTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR CCA 90 bp CTTAGGTCCCAAAGCCACAAGGGTGCCCTTTGTCTTGCTGGGAAGCTGGCTGAGAGCTTGCTCAGGCCGTaGGCCAGGATGCATGCTGGA +
Preference number: 4 (lower is better)
Translates to: LRSQSHKGALCLAGKLAESLLRP*ARMHAG
Trigger: TCCAGCATGCATCCTGGCCCACGGCCTGAGCAAGCT...CTCAGCCAGCTTCCCAGCAAGACAAAGGGCACCCTTGTGGCTTTGGGACCTAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR CCA 90 bp CTGGTGCCAGGCTCAGGAAGAGTCATTCATTGCAAAGGGCCGGCAAGTGAACCAACCCAGCGCCTCTGCTaGACCACGGTGCAGTTCGCT +
Preference number: 4 (lower is better)
Translates to: LVPGSGRVIHCKGPASEPTQRLC*TTVQFA
Trigger: AGCGAACTGCACCGTGGTCCAGCAGAGGCGCTGGGT...TGGTTCACTTGCCGGCCCTTTGCAATGAATGACTCTTCCTGAGCCTGGCACCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276416.11
CDS-3UTR TCA 90 bp ACCCCCAACTTAGCCAACGAAGCCCATGGCCTCAGAAGGGCTGCAGCTTGCTCATCTTCACAGCCATGTTaGGGCTCGGGAAGACACTGC +
Preference number: 4 (lower is better)
Translates to: TPNLANEAHGLRRAAACSSSQPC*GSGRHC
Trigger: GCAGTGTCTTCCCGAGCCTCAACATGGCTGTGAAGA...TGAGCAAGCTGCAGCCCTTCTGAGGCCATGGGCTTCGTTGGCTAAGTTGGGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR TCA 90 bp GTGCCAGGCTCAGGAAGAGTCATTCATTGCAAAGGGCCGGCAAGTGAACCAGGGCAACCTGAGCTCGGATaGGGGACTCAAAGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: VPGSGRVIHCKGPASEPGQPELG*GTQSWA
Trigger: AGCCCAGCTTTGAGTCCCTCATCCGAGCTCAGGTTG...CCCTGGTTCACTTGCCGGCCCTTTGCAATGAATGACTCTTCCTGAGCCTGGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR TCA 90 bp CACTTAGGTCCCAAAGCCACAAGGGTGCCCTTTGTCTTGCTGGGAAGCTGGCTGCAACCTGAGCTCGGATaGGGGACTCAAAGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: HLGPKATRVPFVLLGSWLQPELG*GTQSWA
Trigger: AGCCCAGCTTTGAGTCCCTCATCCGAGCTCAGGTTG...CAGCCAGCTTCCCAGCAAGACAAAGGGCACCCTTGTGGCTTTGGGACCTAAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR TCA 90 bp GGCCAGAGGGCTCCCCAGGATGGGTCTTTTGGAGGTAGATTTGATGCCCACAACCCTGGCTGGTCAAGCTaGTGGGACAGGTCTCCAAAG +
Preference number: 4 (lower is better)
Translates to: GQRAPQDGSFGGRFDAHNPGWSS*WDRSPK
Trigger: CTTTGGAGACCTGTCCCATCAGCTTGACCAGCCAGG...GTTGTGGGCATCAAATCTACCTCCAAAAGACCCATCCTGGGGAGCCCTCTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR TCA 90 bp CCCCAACCACTTAGGTCCCAAAGCCACAAGGGTGCCCTTTGTCTTGCTGGGAAGGGAGTCCTCCAAGAGTaGCGGGGATTCAGTCATCGG +
Preference number: 4 (lower is better)
Translates to: PQPLRSQSHKGALCLAGKGVLQE*RGFSHR
Trigger: CCGATGACTGAATCCCCGTCACTCTTGGAGGACTCC...CTTCCCAGCAAGACAAAGGGCACCCTTGTGGCTTTGGGACCTAAGTGGTTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR TCA 90 bp AGAGTCATTCATTGCAAAGGGCCGGCAAGTGAACCAGGGCCACCTCTGTCCCCAGGAGTCCTCCAAGAGTaGCGGGGATTCAGTCATCGG +
Preference number: 4 (lower is better)
Translates to: RVIHCKGPASEPGPPLSPGVLQE*RGFSHR
Trigger: CCGATGACTGAATCCCCGTCACTCTTGGAGGACTCC...TGGGGACAGAGGTGGCCCTGGTTCACTTGCCGGCCCTTTGCAATGAATGACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR GCA 90 bp TCAGAAGGTCCTGGTCTTGCTCACAGAGGGGATTGGAGAGTAAGTCCAAGGATATCCCGAACCTGCGTCTaGCGCCGGGGTCCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: SEGPGLAHRGDWRVSPRISRTCV*RRGPQP
Trigger: TGGCTGAGGACCCCGGCGGCAGACGCAGGTTCGGGA...TATCCTTGGACTTACTCTCCAATCCCCTCTGTGAGCAAGACCAGGACCTTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522687.5
CDS-3UTR GCA 90 bp GAGTGGCCCTCAGAGAGAGCAGCAGTGGACGATGCAACGCTGCAGGTCCACACCCCAGGTCTGCGTCGGTaGTCTTCTTCATGTCTTTCT +
Preference number: 4 (lower is better)
Translates to: EWPSERAAVDDATLQVHTPGLRR*SSSCLS
Trigger: AGAAAGACATGAAGAAGAGCACCGACGCAGACCTGG...GGTGTGGACCTGCAGCGTTGCATCGTCCACTGCTGCTCTCTCTGAGGGCCACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520292.1
CDS-3UTR GCA 90 bp AGGGCTCCCCAGGATGGGTCTTTTGGAGGTAGATTTGATGCCCACAACGCATGCAGTAGTCGAGGCGGCTaGCGTAGAAGCGCGGCATCT +
Preference number: 4 (lower is better)
Translates to: RAPQDGSFGGRFDAHNACSSRGG*RRSAAS
Trigger: AGATGCCGCGCTTCTACGGCAGCCGCCTCGACTACT...GCATGCGTTGTGGGCATCAAATCTACCTCCAAAAGACCCATCCTGGGGAGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR GCA 90 bp AAGGGCTGCAGCTTGCTCAGGCCGTGGGCCAGGATGCATGCTGGACGGTTCTCCGGAAGAGTCATTCATTaGAAAGGGCCGGCAAGTGAA +
Preference number: 4 (lower is better)
Translates to: KGCSLLRPWARMHAGRFSGRVIH*KGPASE
Trigger: TTCACTTGCCGGCCCTTTGCAATGAATGACTCTTCC...GGAGAACCGTCCAGCATGCATCCTGGCCCACGGCCTGAGCAAGCTGCAGCCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR CCA 90 bp GACGATGCAACGCTGCAGGTCCACACCGGCCTCGTCTTTGTGGATCATGTGTCCAAGGAATCCAGCTCATaGTCCCGAACCTGCGTCTGC +
Preference number: 4 (lower is better)
Translates to: DDATLQVHTGLVFVDHVSKESSS*SRTCVC
Trigger: GCAGACGCAGGTTCGGGACCATGAGCTGGATTCCTT...GGACACATGATCCACAAAGACGAGGCCGGTGTGGACCTGCAGCGTTGCATCGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520292.1
CDS-3UTR CCA 90 bp AAGGCATCCATCCGCTTCATGGCCGTGTCCAGGGCCGTCACCATGTTCAGAAGGAAGGAATCCAGCTCATaGTCCCGAACCTGCGTCTGC +
Preference number: 4 (lower is better)
Translates to: KASIRFMAVSRAVTMFRRKESSS*SRTCVC
Trigger: GCAGACGCAGGTTCGGGACCATGAGCTGGATTCCTT...CCTTCTGAACATGGTGACGGCCCTGGACACGGCCATGAAGCGGATGGATGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522687.5
CDS-3UTR CCA 90 bp GCCCTCAGAGAGAGCAGCAGTGGACGATGCAACGCTGCAGGTCCACACCGGCCTGCTCACAGAGGGGATTaGAGAGTAAGTCCAAGGATA +
Preference number: 4 (lower is better)
Translates to: ALRESSSGRCNAAGPHRPAHRGD*RVSPRI
Trigger: TATCCTTGGACTTACTCTCCAATCCCCTCTGTGAGC...AGGCCGGTGTGGACCTGCAGCGTTGCATCGTCCACTGCTGCTCTCTCTGAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520292.1
CDS-3UTR CCA 90 bp TTCTTGTGGGACAGTTCCACTGACAGCTTGCGTTCCCGAGGTACCAGTCCTCAGCATCCATCCGCTTCATaGCCGTGTCCAGGGCCGTCA +
Preference number: 4 (lower is better)
Translates to: FLWDSSTDSLRSRGTSPQHPSAS*PCPGPS
Trigger: TGACGGCCCTGGACACGGCCATGAAGCGGATGGATG...CTGAGGACTGGTACCTCGGGAACGCAAGCTGTCAGTGGAACTGTCCCACAAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR CCA 90 bp TTCTTGTGGGACAGTTCCACTGACAGCTTGCGTTCCCGAGGTACCAGTCCTCAGAGCTCCTCTCGTGCCTaGTGGAGCTTGGCCAGCACT +
Preference number: 4 (lower is better)
Translates to: FLWDSSTDSLRSRGTSPQSSSRA*WSLAST
Trigger: AGTGCTGGCCAAGCTCCACCAGGCACGAGAGGAGCT...CTGAGGACTGGTACCTCGGGAACGCAAGCTGTCAGTGGAACTGTCCCACAAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR CCA 90 bp ACCCCCAACTTAGCCAACGAAGCCCATGGCCTCAGAAGGGCTGCAGCTTGCTCAGCAGCTGCCTGTTCTTaGCTTCAAAGTCCTCCCGCA +
Preference number: 4 (lower is better)
Translates to: TPNLANEAHGLRRAAACSAAACS*LQSPPA
Trigger: TGCGGGAGGACTTTGAAGCCAAGAACAGGCAGCTGC...TGAGCAAGCTGCAGCCCTTCTGAGGCCATGGGCTTCGTTGGCTAAGTTGGGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR CCA 90 bp TGTGGGACAGTTCCACTGACAGCTTGCGTTCCCGAGGTACCAGTCCTCAGTGACCTCATCGGAGTGGCCTaGCTGGTCAAGCTGATGGGA +
Preference number: 4 (lower is better)
Translates to: CGTVPLTACVPEVPVLSDLIGVA*LVKLMG
Trigger: TCCCATCAGCTTGACCAGCCAGGCCACTCCGATGAG...GTCACTGAGGACTGGTACCTCGGGAACGCAAGCTGTCAGTGGAACTGTCCCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR CCA 90 bp CACTTAGGTCCCAAAGCCACAAGGGTGCCCTTTGTCTTGCTGGGAAGCTGGCTGCTCATCGGAGTGGCCTaGCTGGTCAAGCTGATGGGA +
Preference number: 4 (lower is better)
Translates to: HLGPKATRVPFVLLGSWLLIGVA*LVKLMG
Trigger: TCCCATCAGCTTGACCAGCCAGGCCACTCCGATGAG...CAGCCAGCTTCCCAGCAAGACAAAGGGCACCCTTGTGGCTTTGGGACCTAAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR CCA 90 bp CAGGATGGGTCTTTTGGAGGTAGATTTGATGCCCACAACGCATGCAAGGCTAAGTGCTGGGGCTGTGAGTaGGGAGACGGCGGCCTGCCT +
Preference number: 4 (lower is better)
Translates to: QDGSFGGRFDAHNACKAKCWGCE*GDGGLP
Trigger: AGGCAGGCCGCCGTCTCCCCACTCACAGCCCCAGCA...CTTAGCCTTGCATGCGTTGTGGGCATCAAATCTACCTCCAAAAGACCCATCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR CCA 90 bp CTGGTGCCAGGCTCAGGAAGAGTCATTCATTGCAAAGGGCCGGCAAGTGAACCAAGCCAACGAAGCCCATaGCCTCAGAAGGGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: LVPGSGRVIHCKGPASEPSQRSP*PQKGCS
Trigger: GCTGCAGCCCTTCTGAGGCCATGGGCTTCGTTGGCT...TGGTTCACTTGCCGGCCCTTTGCAATGAATGACTCTTCCTGAGCCTGGCACCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR CCA 90 bp GACGATGCAACGCTGCAGGTCCACACCGGCCTCGTCTTTGTGGATCATGTGTCCGAGCTCATGACTCTGTaGCCATTCGGAGGTGACCCA +
Preference number: 4 (lower is better)
Translates to: DDATLQVHTGLVFVDHVSELMTL*PFGGDP
Trigger: TGGGTCACCTCCGAATGGCCACAGAGTCATGAGCTC...GGACACATGATCCACAAAGACGAGGCCGGTGTGGACCTGCAGCGTTGCATCGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520292.1
CDS-3UTR CCA 90 bp AGTGGACGATGCAACGCTGCAGGTCCACACCGGCCTCGTCTTTGTGGATCATGTCAGAGAGAGCAGCAGTaGACGATGCAACGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: SGRCNAAGPHRPRLCGSCQREQQ*TMQRCR
Trigger: CCTGCAGCGTTGCATCGTCCACTGCTGCTCTCTCTG...ACATGATCCACAAAGACGAGGCCGGTGTGGACCTGCAGCGTTGCATCGTCCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520292.1
CDS-3UTR TCA 90 bp AGAGTCATTCATTGCAAAGGGCCGGCAAGTGAACCAGGGCCACCTCTGTCCCCATCTTCACAGCCATGTTaGGGCTCGGGAAGACACTGC +
Preference number: 4 (lower is better)
Translates to: RVIHCKGPASEPGPPLSPSSQPC*GSGRHC
Trigger: GCAGTGTCTTCCCGAGCCTCAACATGGCTGTGAAGA...TGGGGACAGAGGTGGCCCTGGTTCACTTGCCGGCCCTTTGCAATGAATGACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR TCA 90 bp GTGCCAGGCTCAGGAAGAGTCATTCATTGCAAAGGGCCGGCAAGTGAACCAGGGTCTTCACAGCCATGTTaGGGCTCGGGAAGACACTGC +
Preference number: 4 (lower is better)
Translates to: VPGSGRVIHCKGPASEPGSSQPC*GSGRHC
Trigger: GCAGTGTCTTCCCGAGCCTCAACATGGCTGTGAAGA...CCCTGGTTCACTTGCCGGCCCTTTGCAATGAATGACTCTTCCTGAGCCTGGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR TCA 90 bp CTGGTGCCAGGCTCAGGAAGAGTCATTCATTGCAAAGGGCCGGCAAGTGAACCACCTGGCTGGTCAAGCTaGTGGGACAGGTCTCCAAAG +
Preference number: 4 (lower is better)
Translates to: LVPGSGRVIHCKGPASEPPGWSS*WDRSPK
Trigger: CTTTGGAGACCTGTCCCATCAGCTTGACCAGCCAGG...TGGTTCACTTGCCGGCCCTTTGCAATGAATGACTCTTCCTGAGCCTGGCACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR TCA 90 bp AGGGCTCCCCAGGATGGGTCTTTTGGAGGTAGATTTGATGCCCACAACGCATGCGGAGTCCTCCAAGAGTaGCGGGGATTCAGTCATCGG +
Preference number: 4 (lower is better)
Translates to: RAPQDGSFGGRFDAHNACGVLQE*RGFSHR
Trigger: CCGATGACTGAATCCCCGTCACTCTTGGAGGACTCC...GCATGCGTTGTGGGCATCAAATCTACCTCCAAAAGACCCATCCTGGGGAGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR GCA 90 bp CTATGTGAGGTTCTAGATCCGCATAAGCAGGAAGAAGGCCCAGGTTGCTGTCTTTCATGGTCCCGAACCTaGGTCTGCCGCCGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: LCEVLDPHKQEEGPGCCLSWSRT*VCRRGP
Trigger: AGGACCCCGGCGGCAGACGCAGGTTCGGGACCATGA...AAGACAGCAACCTGGGCCTTCTTCCTGCTTATGCGGATCTAGAACCTCACATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522268.1
CDS-3UTR GCA 90 bp TCCACTGTGACTAGAAGGGACCGCGTGGGAGACTCAGAGGAGTGGCCCTCAGAGTTCTTCATGTCTTTCTaGAGCCTCCGGGTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: STVTRRDRVGDSEEWPSEFFMSF*SLRVCS
Trigger: AGAGCAGACCCGGAGGCTGCAGAAAGACATGAAGAA...CTCTGAGGGCCACTCCTCTGAGTCTCCCACGCGGTCCCTTCTAGTCACAGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520292.1
CDS-3UTR GCA 90 bp CCAGGCTCAGGAAGAGTCATTCATTGCAAAGGGCCGGCAAGTGAACCAGGGCCATCTACACTGCTTACCTaGTGGGGCTGTGAGTGGGGA +
Preference number: 4 (lower is better)
Translates to: PGSGRVIHCKGPASEPGPSTLLT*WGCEWG
Trigger: TCCCCACTCACAGCCCCAGCAGGTAAGCAGTGTAGA...TGGCCCTGGTTCACTTGCCGGCCCTTTGCAATGAATGACTCTTCCTGAGCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR GCA 90 bp CGGGAACCCCAACCACTTAGGTCCCAAAGCCACAAGGGTGCCCTTTGTCTTGCTTCTACACTGCTTACCTaGTGGGGCTGTGAGTGGGGA +
Preference number: 4 (lower is better)
Translates to: REPQPLRSQSHKGALCLASTLLT*WGCEWG
Trigger: TCCCCACTCACAGCCCCAGCAGGTAAGCAGTGTAGA...AGCAAGACAAAGGGCACCCTTGTGGCTTTGGGACCTAAGTGGTTGGGGTTCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR GCA 90 bp AACTTAGCCAACGAAGCCCATGGCCTCAGAAGGGCTGCAGCTTGCTCAGGCCGTAGGGTTTGTCTACACTaGTTACCTGCTGGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: NLANEAHGLRRAAACSGRRVCLH*LPAGAV
Trigger: CACAGCCCCAGCAGGTAAGCAGTGTAGACAAACCCT...ACGGCCTGAGCAAGCTGCAGCCCTTCTGAGGCCATGGGCTTCGTTGGCTAAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR GCA 90 bp AACTTAGCCAACGAAGCCCATGGCCTCAGAAGGGCTGCAGCTTGCTCAGGCCGTGTGGGCCAGGATGCATaGTGGACGGTTCTCCAAATA +
Preference number: 4 (lower is better)
Translates to: NLANEAHGLRRAAACSGRVGQDA*WTVLQI
Trigger: TATTTGGAGAACCGTCCAGCATGCATCCTGGCCCAC...ACGGCCTGAGCAAGCTGCAGCCCTTCTGAGGCCATGGGCTTCGTTGGCTAAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR GCA 90 bp AGAGTCATTCATTGCAAAGGGCCGGCAAGTGAACCAGGGCCACCTCTGTCCCCAGTTCCACTGACAGCTTaGGTTCCCGAGGTACCAGTC +
Preference number: 4 (lower is better)
Translates to: RVIHCKGPASEPGPPLSPVPLTA*VPEVPV
Trigger: GACTGGTACCTCGGGAACGCAAGCTGTCAGTGGAAC...TGGGGACAGAGGTGGCCCTGGTTCACTTGCCGGCCCTTTGCAATGAATGACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR GCA 90 bp CAGTGGACGATGCAACGCTGCAGGTCCACACCGGCCTCGTCTTTGTGGATCATGGCTGCTTCAGGAAAATaGCCTGAGGACCTCCACTGT +
Preference number: 4 (lower is better)
Translates to: QWTMQRCRSTPASSLWIMAASGK*PEDLHC
Trigger: ACAGTGGAGGTCCTCAGGGCATTTTCCTGAAGCAGC...CATGATCCACAAAGACGAGGCCGGTGTGGACCTGCAGCGTTGCATCGTCCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520292.1
CDS-3UTR CCA 90 bp TGCAAGGCTAAGACCCCCAACTTAGCCAACGAAGCCCATGGCCTCAGAAGGGCTAAGGAATCCAGCTCATaGTCCCGAACCTGCGTCTGC +
Preference number: 4 (lower is better)
Translates to: CKAKTPNLANEAHGLRRAKESSS*SRTCVC
Trigger: GCAGACGCAGGTTCGGGACCATGAGCTGGATTCCTT...AGCCCTTCTGAGGCCATGGGCTTCGTTGGCTAAGTTGGGGGTCTTAGCCTTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276416.11
ENST00000519513.5
CDS-3UTR CCA 90 bp CGGGAACCCCAACCACTTAGGTCCCAAAGCCACAAGGGTGCCCTTTGTCTTGCTAAGGAATCCAGCTCATaGTCCCGAACCTGCGTCTGC +
Preference number: 4 (lower is better)
Translates to: REPQPLRSQSHKGALCLAKESSS*SRTCVC
Trigger: GCAGACGCAGGTTCGGGACCATGAGCTGGATTCCTT...AGCAAGACAAAGGGCACCCTTGTGGCTTTGGGACCTAAGTGGTTGGGGTTCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276416.11
ENST00000519513.5
CDS-3UTR CCA 90 bp AAGGGCTGCAGCTTGCTCAGGCCGTGGGCCAGGATGCATGCTGGACGGTTCTCCTCGATCACAGTCTTCTaGATCTGGTTCACCTTTTCC +
Preference number: 4 (lower is better)
Translates to: KGCSLLRPWARMHAGRFSSITVF*IWFTFS
Trigger: GGAAAAGGTGAACCAGATCCAGAAGACTGTGATCGA...GGAGAACCGTCCAGCATGCATCCTGGCCCACGGCCTGAGCAAGCTGCAGCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR CCA 90 bp TTCTTGTGGGACAGTTCCACTGACAGCTTGCGTTCCCGAGGTACCAGTCCTCAGACACTGCTTACCTGCTaGGGCTGTGAGTGGGGAGAC +
Preference number: 4 (lower is better)
Translates to: FLWDSSTDSLRSRGTSPQTLLTC*GCEWGD
Trigger: GTCTCCCCACTCACAGCCCCAGCAGGTAAGCAGTGT...CTGAGGACTGGTACCTCGGGAACGCAAGCTGTCAGTGGAACTGTCCCACAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR CCA 90 bp CTGGTGCCAGGCTCAGGAAGAGTCATTCATTGCAAAGGGCCGGCAAGTGAACCAACACTGCTTACCTGCTaGGGCTGTGAGTGGGGAGAC +
Preference number: 4 (lower is better)
Translates to: LVPGSGRVIHCKGPASEPTLLTC*GCEWGD
Trigger: GTCTCCCCACTCACAGCCCCAGCAGGTAAGCAGTGT...TGGTTCACTTGCCGGCCCTTTGCAATGAATGACTCTTCCTGAGCCTGGCACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR CCA 90 bp AAGGATATCTTCACGGCAGATTTTGACATGGCCGGGCATGGTGGTGGTGACGGCCGGCAGATTTTGACATaGCCGGGCATGGTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: KDIFTADFDMAGHGGGDGRQILT*PGMVVV
Trigger: CACCACCACCATGCCCGGCCATGTCAAAATCTGCCG...GCCGTCACCACCACCATGCCCGGCCATGTCAAAATCTGCCGTGAAGATATCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522687.5
CDS-3UTR TCA 90 bp AAGGATATCTTCACGGCAGATTTTGACATGGCCGGGCATGGTGGTGGTGACGGCTCTTCACAGCCATGTTaGGGCTCGGGAAGACACTGC +
Preference number: 4 (lower is better)
Translates to: KDIFTADFDMAGHGGGDGSSQPC*GSGRHC
Trigger: GCAGTGTCTTCCCGAGCCTCAACATGGCTGTGAAGA...GCCGTCACCACCACCATGCCCGGCCATGTCAAAATCTGCCGTGAAGATATCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522687.5
CDS-3UTR TCA 90 bp CAAAGTTCCAACCAGCTGCTTCAGGAAAATGCCCTGAGGACCTCCACTGTGACTAGCCCAGGGAGCTCATaGCTCTGTGGCCATTCGGAG +
Preference number: 4 (lower is better)
Translates to: QSSNQLLQENALRTSTVTSPGSS*LCGHSE
Trigger: CTCCGAATGGCCACAGAGTCATGAGCTCCCTGGGCT...AGTCACAGTGGAGGTCCTCAGGGCATTTTCCTGAAGCAGCTGGTTGGAACTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520292.1
CDS-3UTR GCA 90 bp CCACTTAGGTCCCAAAGCCACAAGGGTGCCCTTTGTCTTGCTGGGAAGCTGGCTAGAAGGTCCTGGTCTTaGTCACAGAGGGGATTGGAG +
Preference number: 4 (lower is better)
Translates to: PLRSQSHKGALCLAGKLARRSWS*SQRGLE
Trigger: CTCCAATCCCCTCTGTGAGCAAGACCAGGACCTTCT...AGCCAGCTTCCCAGCAAGACAAAGGGCACCCTTGTGGCTTTGGGACCTAAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR GCA 90 bp CTTAGGTCCCAAAGCCACAAGGGTGCCCTTTGTCTTGCTGGGAAGCTGGCTGAGAGAAGGTCCTGGTCTTaGTCACAGAGGGGATTGGAG +
Preference number: 4 (lower is better)
Translates to: LRSQSHKGALCLAGKLAERRSWS*SQRGLE
Trigger: CTCCAATCCCCTCTGTGAGCAAGACCAGGACCTTCT...CTCAGCCAGCTTCCCAGCAAGACAAAGGGCACCCTTGTGGCTTTGGGACCTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR GCA 90 bp CTGGTGCCAGGCTCAGGAAGAGTCATTCATTGCAAAGGGCCGGCAAGTGAACCATCTACACTGCTTACCTaGTGGGGCTGTGAGTGGGGA +
Preference number: 4 (lower is better)
Translates to: LVPGSGRVIHCKGPASEPSTLLT*WGCEWG
Trigger: TCCCCACTCACAGCCCCAGCAGGTAAGCAGTGTAGA...TGGTTCACTTGCCGGCCCTTTGCAATGAATGACTCTTCCTGAGCCTGGCACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR GCA 90 bp CAAAGTTCCAACCAGCTGCTTCAGGAAAATGCCCTGAGGACCTCCACTGTGACTGGCAAGCCAGAGCCCTaGAGTGTCCAGGATCAGGCT +
Preference number: 4 (lower is better)
Translates to: QSSNQLLQENALRTSTVTGKPEP*SVQDQA
Trigger: AGCCTGATCCTGGACACTGCAGGGCTCTGGCTTGCC...AGTCACAGTGGAGGTCCTCAGGGCATTTTCCTGAAGCAGCTGGTTGGAACTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520292.1
CDS-3UTR CCA 90 bp GAGGTTCTAGATCCGCATAAGCAGGAAGAAGGCCCAGGTTGCTGTCTTCCCAGCAAGGAATCCAGCTCATaGTCCCGAACCTGCGTCTGC +
Preference number: 4 (lower is better)
Translates to: EVLDPHKQEEGPGCCLPSKESSS*SRTCVC
Trigger: GCAGACGCAGGTTCGGGACCATGAGCTGGATTCCTT...GCTGGGAAGACAGCAACCTGGGCCTTCTTCCTGCTTATGCGGATCTAGAACCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522268.1
CDS-3UTR CCA 90 bp GAGTGGCCCTCAGAGAGAGCAGCAGTGGACGATGCAACGCTGCAGGTCCACACCCTCTCTCCACTGTTTTaGGCACAATCTGTTTCTTGG +
Preference number: 4 (lower is better)
Translates to: EWPSERAAVDDATLQVHTLSPLF*AQSVSW
Trigger: CCAAGAAACAGATTGTGCCCAAAACAGTGGAGAGAG...GGTGTGGACCTGCAGCGTTGCATCGTCCACTGCTGCTCTCTCTGAGGGCCACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520292.1
CDS-3UTR CCA 90 bp GCAGTGGACGATGCAACGCTGCAGGTCCACACCGGCCTCGTCTTTGTGGATCATATGTTCAGAAGGTCCTaGTCTTGCTCACAGAGGGGA +
Preference number: 4 (lower is better)
Translates to: AVDDATLQVHTGLVFVDHMFRRS*SCSQRG
Trigger: TCCCCTCTGTGAGCAAGACCAGGACCTTCTGAACAT...ATGATCCACAAAGACGAGGCCGGTGTGGACCTGCAGCGTTGCATCGTCCACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520292.1
CDS-3UTR CCA 90 bp AATTCTTGTGGGACAGTTCCACTGACAGCTTGCGTTCCCGAGGTACCAGTCCTCACACTGCTTACCTGCTaGGGCTGTGAGTGGGGAGAC +
Preference number: 4 (lower is better)
Translates to: NSCGTVPLTACVPEVPVLTLLTC*GCEWGD
Trigger: GTCTCCCCACTCACAGCCCCAGCAGGTAAGCAGTGT...GAGGACTGGTACCTCGGGAACGCAAGCTGTCAGTGGAACTGTCCCACAAGAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR CCA 90 bp AGGGGTTTCCTCTGCTCGCCTAAGTTACAGCACAATACTATGTGGACGTTTCATGTTCGCTCCAGAAGGTaGGCCAGGGCCGGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: RGFLCSPKLQHNTMWTFHVRSRR*ARAGEV
Trigger: CACCTCCCCGGCCCTGGCCCACCTTCTGGAGCGAAC...ATGAAACGTCCACATAGTATTGTGCTGTAACTTAGGCGAGCAGAGGAAACCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276416.11
CDS-3UTR TCA 90 bp CATGGCCGTGTCCAGGGCCGTCACCATGTTCAGAAGGTCCTGGTCTTGCTCACATGCTCTTCCAGCTGCTaGAGTTTTCCATACTCCCTT +
Preference number: 4 (lower is better)
Translates to: HGRVQGRHHVQKVLVLLTCSSSC*SFPYSL
Trigger: AAGGGAGTATGGAAAACTTCAGCAGCTGGAAGAGCA...TGTGAGCAAGACCAGGACCTTCTGAACATGGTGACGGCCCTGGACACGGCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522687.5
CDS-3UTR TCA 90 bp AAGGCATCCATCCGCTTCATGGCCGTGTCCAGGGCCGTCACCATGTTCAGAAGGTCACCTTTTCCTGATTaGAGGCATCCATCCGCTTCA +
Preference number: 4 (lower is better)
Translates to: KASIRFMAVSRAVTMFRRSPFPD*RHPSAS
Trigger: TGAAGCGGATGGATGCCTTCAATCAGGAAAAGGTGA...CCTTCTGAACATGGTGACGGCCCTGGACACGGCCATGAAGCGGATGGATGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522687.5
CDS-3UTR GCA 90 bp TCACGGCAGATTTTGACATGGCCGGGCATGGTGGTGGTGACGGCGGCTCCCAGGATCTGTTTCTTGGGCTaGCCAATCTTAAAAGGAATC +
Preference number: 4 (lower is better)
Translates to: SRQILTWPGMVVVTAAPRICFLG*PILKGI
Trigger: GATTCCTTTTAAGATTGGGCAGCCCAAGAAACAGAT...CCTGGGAGCCGCCGTCACCACCACCATGCCCGGCCATGTCAAAATCTGCCGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522687.5
CDS-3UTR GCA 90 bp TTCTTGTGGGACAGTTCCACTGACAGCTTGCGTTCCCGAGGTACCAGTCCTCAGAGAAGGTCCTGGTCTTaGTCACAGAGGGGATTGGAG +
Preference number: 4 (lower is better)
Translates to: FLWDSSTDSLRSRGTSPQRRSWS*SQRGLE
Trigger: CTCCAATCCCCTCTGTGAGCAAGACCAGGACCTTCT...CTGAGGACTGGTACCTCGGGAACGCAAGCTGTCAGTGGAACTGTCCCACAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR GCA 90 bp AAGGATATCTTCACGGCAGATTTTGACATGGCCGGGCATGGTGGTGGTGACGGCAGAAGGTCCTGGTCTTaGTCACAGAGGGGATTGGAG +
Preference number: 4 (lower is better)
Translates to: KDIFTADFDMAGHGGGDGRRSWS*SQRGLE
Trigger: CTCCAATCCCCTCTGTGAGCAAGACCAGGACCTTCT...GCCGTCACCACCACCATGCCCGGCCATGTCAAAATCTGCCGTGAAGATATCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522687.5
CDS-3UTR GCA 90 bp GATACTCAGGTGAGACACAAACCCACTGTTCCTGCTTTGAGACCTGTGAATTCTCCGCAGCTCCTCTCGTaGCTGGTGGAGCTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: DTQVRHKPTVPALRPVNSPQLLS*LVELGQ
Trigger: CTGGCCAAGCTCCACCAGGCACGAGAGGAGCTGCGG...AGAATTCACAGGTCTCAAAGCAGGAACAGTGGGTTTGTGTCTCACCTGAGTATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276416.11
ENST00000519513.5
CDS-3UTR GCA 90 bp GGCCAGAGGGCTCCCCAGGATGGGTCTTTTGGAGGTAGATTTGATGCCCACAACATCTCCTCCAGCAGCTaGCTGTTCTTGGCTTCAAAG +
Preference number: 4 (lower is better)
Translates to: GQRAPQDGSFGGRFDAHNISSSS*LFLASK
Trigger: CTTTGAAGCCAAGAACAGGCAGCTGCTGGAGGAGAT...GTTGTGGGCATCAAATCTACCTCCAAAAGACCCATCCTGGGGAGCCCTCTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR GCA 90 bp TTCTTGTGGGACAGTTCCACTGACAGCTTGCGTTCCCGAGGTACCAGTCCTCAGAGGGTTTGTCTACACTaGTTACCTGCTGGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: FLWDSSTDSLRSRGTSPQRVCLH*LPAGAV
Trigger: CACAGCCCCAGCAGGTAAGCAGTGTAGACAAACCCT...CTGAGGACTGGTACCTCGGGAACGCAAGCTGTCAGTGGAACTGTCCCACAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR CCA 90 bp CAAAGTTCCAACCAGCTGCTTCAGGAAAATGCCCTGAGGACCTCCACTGTGACTCGGCAGATTTTGACATaGCCAGGTCTGCGTCGGTGC +
Preference number: 4 (lower is better)
Translates to: QSSNQLLQENALRTSTVTRQILT*PGLRRC
Trigger: GCACCGACGCAGACCTGGCCATGTCAAAATCTGCCG...AGTCACAGTGGAGGTCCTCAGGGCATTTTCCTGAAGCAGCTGGTTGGAACTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520292.1
CDS-3UTR CCA 90 bp GTGCCAGGCTCAGGAAGAGTCATTCATTGCAAAGGGCCGGCAAGTGAACCAGGGATGTTCAGAAGGTCCTaGTCTTGCTCACAGAGGGGA +
Preference number: 4 (lower is better)
Translates to: VPGSGRVIHCKGPASEPGMFRRS*SCSQRG
Trigger: TCCCCTCTGTGAGCAAGACCAGGACCTTCTGAACAT...CCCTGGTTCACTTGCCGGCCCTTTGCAATGAATGACTCTTCCTGAGCCTGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR TCA 90 bp CAGCTGCTTCAGGAAAATGCCCTGAGGACCTCCACTGTGACTAGAAGGGACCGCTGCTCTTCCAGCTGCTaGAGTTTTCCATACTCCCTT +
Preference number: 4 (lower is better)
Translates to: QLLQENALRTSTVTRRDRCSSSC*SFPYSL
Trigger: AAGGGAGTATGGAAAACTTCAGCAGCTGGAAGAGCA...GCGGTCCCTTCTAGTCACAGTGGAGGTCCTCAGGGCATTTTCCTGAAGCAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520292.1
CDS-3UTR TCA 90 bp GGCCAGAGGGCTCCCCAGGATGGGTCTTTTGGAGGTAGATTTGATGCCCACAACTCACCTTTTCCTGATTaGAGGCATCCATCCGCTTCA +
Preference number: 4 (lower is better)
Translates to: GQRAPQDGSFGGRFDAHNSPFPD*RHPSAS
Trigger: TGAAGCGGATGGATGCCTTCAATCAGGAAAAGGTGA...GTTGTGGGCATCAAATCTACCTCCAAAAGACCCATCCTGGGGAGCCCTCTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR TCA 90 bp CCACTTAGGTCCCAAAGCCACAAGGGTGCCCTTTGTCTTGCTGGGAAGCTGGCTTCACCTTTTCCTGATTaGAGGCATCCATCCGCTTCA +
Preference number: 4 (lower is better)
Translates to: PLRSQSHKGALCLAGKLASPFPD*RHPSAS
Trigger: TGAAGCGGATGGATGCCTTCAATCAGGAAAAGGTGA...AGCCAGCTTCCCAGCAAGACAAAGGGCACCCTTGTGGCTTTGGGACCTAAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR TCA 90 bp CAGGATGGGTCTTTTGGAGGTAGATTTGATGCCCACAACGCATGCAAGGCTAAGCAACCTGAGCTCGGATaGGGGACTCAAAGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: QDGSFGGRFDAHNACKAKQPELG*GTQSWA
Trigger: AGCCCAGCTTTGAGTCCCTCATCCGAGCTCAGGTTG...CTTAGCCTTGCATGCGTTGTGGGCATCAAATCTACCTCCAAAAGACCCATCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR TCA 90 bp AGAGTCATTCATTGCAAAGGGCCGGCAAGTGAACCAGGGCCACCTCTGTCCCCAAAAGAGGTTTTGAAGTaGAAAGGCAACGAGGGGCCA +
Preference number: 4 (lower is better)
Translates to: RVIHCKGPASEPGPPLSPKEVLK*KGNEGP
Trigger: TGGCCCCTCGTTGCCTTTTCACTTCAAAACCTCTTT...TGGGGACAGAGGTGGCCCTGGTTCACTTGCCGGCCCTTTGCAATGAATGACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR TCA 90 bp CCAGGCTCAGGAAGAGTCATTCATTGCAAAGGGCCGGCAAGTGAACCAGGGCCAAAAGAGGTTTTGAAGTaGAAAGGCAACGAGGGGCCA +
Preference number: 4 (lower is better)
Translates to: PGSGRVIHCKGPASEPGPKEVLK*KGNEGP
Trigger: TGGCCCCTCGTTGCCTTTTCACTTCAAAACCTCTTT...TGGCCCTGGTTCACTTGCCGGCCCTTTGCAATGAATGACTCTTCCTGAGCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR TCA 90 bp GTGCCAGGCTCAGGAAGAGTCATTCATTGCAAAGGGCCGGCAAGTGAACCAGGGAAAGAGGTTTTGAAGTaGAAAGGCAACGAGGGGCCA +
Preference number: 4 (lower is better)
Translates to: VPGSGRVIHCKGPASEPGKEVLK*KGNEGP
Trigger: TGGCCCCTCGTTGCCTTTTCACTTCAAAACCTCTTT...CCCTGGTTCACTTGCCGGCCCTTTGCAATGAATGACTCTTCCTGAGCCTGGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR TCA 90 bp TGCAAGGCTAAGACCCCCAACTTAGCCAACGAAGCCCATGGCCTCAGAAGGGCTTTCCAGATACTCAGGTaGGACACAAACCCACTGTTC +
Preference number: 4 (lower is better)
Translates to: CKAKTPNLANEAHGLRRAFQILR*DTNPLF
Trigger: GAACAGTGGGTTTGTGTCTCACCTGAGTATCTGGAA...AGCCCTTCTGAGGCCATGGGCTTCGTTGGCTAAGTTGGGGGTCTTAGCCTTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276416.11
ENST00000519513.5
CDS-3UTR TCA 90 bp ACCCCCAACTTAGCCAACGAAGCCCATGGCCTCAGAAGGGCTGCAGCTTGCTCACTTCACGGCAGATTTTaGCATGGTGCTGAAGTTTTC +
Preference number: 4 (lower is better)
Translates to: TPNLANEAHGLRRAAACSLHGRF*HGAEVF
Trigger: GAAAACTTCAGCACCATGTCAAAATCTGCCGTGAAG...TGAGCAAGCTGCAGCCCTTCTGAGGCCATGGGCTTCGTTGGCTAAGTTGGGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000399977.8
CDS-3UTR TCA 90 bp GTGCCAGGCTCAGGAAGAGTCATTCATTGCAAAGGGCCGGCAAGTGAACCAGGGCTTCACGGCAGATTTTaGCATGGTGTTTTGGGCACA +
Preference number: 4 (lower is better)
Translates to: VPGSGRVIHCKGPASEPGLHGRF*HGVLGT
Trigger: TGTGCCCAAAACACCATGTCAAAATCTGCCGTGAAG...CCCTGGTTCACTTGCCGGCCCTTTGCAATGAATGACTCTTCCTGAGCCTGGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519513.5
CDS-3UTR GCA 90 bp TTCTTGTGGGACAGTTCCACTGACAGCTTGCGTTCCCGAGGTACCAGTCCTCAGATCTCCTCCAGCAGCTaGCTGTTCTTGGCTTCAAAG +
Preference number: 4 (lower is better)
Translates to: FLWDSSTDSLRSRGTSPQISSSS*LFLASK
Trigger: CTTTGAAGCCAAGAACAGGCAGCTGCTGGAGGAGAT...CTGAGGACTGGTACCTCGGGAACGCAAGCTGTCAGTGGAACTGTCCCACAAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR GCA 90 bp GGAGGTAGATTTGATGCCCACAACGCATGCAAGGCTAAGACCCCCAACTTAGCCGTGGGCCAGGATGCATaGTGGACGGTTCTCCAAATA +
Preference number: 4 (lower is better)
Translates to: GGRFDAHNACKAKTPNLAVGQDA*WTVLQI
Trigger: TATTTGGAGAACCGTCCAGCATGCATCCTGGCCCAC...GGCTAAGTTGGGGGTCTTAGCCTTGCATGCGTTGTGGGCATCAAATCTACCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR CCA 90 bp GGCCAGAGGGCTCCCCAGGATGGGTCTTTTGGAGGTAGATTTGATGCCCACAACGCTCACAGAGGGGATTaGAGAGTAAGTCCAAGGATA +
Preference number: 4 (lower is better)
Translates to: GQRAPQDGSFGGRFDAHNAHRGD*RVSPRI
Trigger: TATCCTTGGACTTACTCTCCAATCCCCTCTGTGAGC...GTTGTGGGCATCAAATCTACCTCCAAAAGACCCATCCTGGGGAGCCCTCTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR CCA 90 bp TTCCTGATTGAAGGCATCCATCCGCTTCATGGCCGTGTCCAGGGCCGTCACCATGCTCACAGAGGGGATTaGAGAGTAAGTCCAAGGATA +
Preference number: 4 (lower is better)
Translates to: FLIEGIHPLHGRVQGRHHAHRGD*RVSPRI
Trigger: TATCCTTGGACTTACTCTCCAATCCCCTCTGTGAGC...ATGGTGACGGCCCTGGACACGGCCATGAAGCGGATGGATGCCTTCAATCAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522687.5
CDS-3UTR CCA 90 bp CCACTTAGGTCCCAAAGCCACAAGGGTGCCCTTTGTCTTGCTGGGAAGCTGGCTACCTGTGAATTCTTGTaGGACAGTTCCACTGACAGC +
Preference number: 4 (lower is better)
Translates to: PLRSQSHKGALCLAGKLATCEFL*DSSTDS
Trigger: GCTGTCAGTGGAACTGTCCCACAAGAATTCACAGGT...AGCCAGCTTCCCAGCAAGACAAAGGGCACCCTTGTGGCTTTGGGACCTAAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR CCA 90 bp AGAGTCATTCATTGCAAAGGGCCGGCAAGTGAACCAGGGCCACCTCTGTCCCCAACCTGTGAATTCTTGTaGGACAGTTCCACTGACAGC +
Preference number: 4 (lower is better)
Translates to: RVIHCKGPASEPGPPLSPTCEFL*DSSTDS
Trigger: GCTGTCAGTGGAACTGTCCCACAAGAATTCACAGGT...TGGGGACAGAGGTGGCCCTGGTTCACTTGCCGGCCCTTTGCAATGAATGACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR CCA 90 bp GGCCTGCCTAGGGCTCCTGGTGCCAGGCTCAGGAAGAGTCATTCATTGCAAAGGCGGCAGATTTTGACATaGTGTTTTGGGCACAATCTG +
Preference number: 4 (lower is better)
Translates to: GLPRAPGARLRKSHSLQRRQILT*CFGHNL
Trigger: CAGATTGTGCCCAAAACACCATGTCAAAATCTGCCG...CCTTTGCAATGAATGACTCTTCCTGAGCCTGGCACCAGGAGCCCTAGGCAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519513.5
CDS-3UTR TCA 90 bp CCCAACTTAGCCAACGAAGCCCATGGCCTCAGAAGGGCTGCAGCTTGCTCAGGCATTTTGACATGGTGCTaGAGTTTTCCATACTCCCTT +
Preference number: 4 (lower is better)
Translates to: PNLANEAHGLRRAAACSGILTWC*SFPYSL
Trigger: AAGGGAGTATGGAAAACTTCAGCACCATGTCAAAAT...GCCTGAGCAAGCTGCAGCCCTTCTGAGGCCATGGGCTTCGTTGGCTAAGTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399977.8
CDS-3UTR TCA 90 bp TCTTGCTCACAGAGGGGATTGGAGAGTAAGTCCAAGGATATCTTCACGGCAGATCTTCACGGCAGATTTTaGCATGGCCGGGCATGGTGG +
Preference number: 4 (lower is better)
Translates to: SCSQRGLESKSKDIFTADLHGRF*HGRAWW
Trigger: CCACCATGCCCGGCCATGTCAAAATCTGCCGTGAAG...ATCTGCCGTGAAGATATCCTTGGACTTACTCTCCAATCCCCTCTGTGAGCAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522687.5
CDS-3UTR GCA 90 bp CAAAGTTCCAACCAGCTGCTTCAGGAAAATGCCCTGAGGACCTCCACTGTGACTAGAAGGTCCTGGTCTTaGTCACAGAGGGGATTGGAG +
Preference number: 4 (lower is better)
Translates to: QSSNQLLQENALRTSTVTRRSWS*SQRGLE
Trigger: CTCCAATCCCCTCTGTGAGCAAGACCAGGACCTTCT...AGTCACAGTGGAGGTCCTCAGGGCATTTTCCTGAAGCAGCTGGTTGGAACTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520292.1
CDS-3UTR GCA 90 bp AATTCTTGTGGGACAGTTCCACTGACAGCTTGCGTTCCCGAGGTACCAGTCCTCATCTCCTCCAGCAGCTaGCTGTTCTTGGCTTCAAAG +
Preference number: 4 (lower is better)
Translates to: NSCGTVPLTACVPEVPVLISSSS*LFLASK
Trigger: CTTTGAAGCCAAGAACAGGCAGCTGCTGGAGGAGAT...GAGGACTGGTACCTCGGGAACGCAAGCTGTCAGTGGAACTGTCCCACAAGAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR GCA 90 bp CCACTTAGGTCCCAAAGCCACAAGGGTGCCCTTTGTCTTGCTGGGAAGCTGGCTCAAACCCACTGTTCCTaGTTTGAGACCTGTGAATTC +
Preference number: 4 (lower is better)
Translates to: PLRSQSHKGALCLAGKLAQTHCS*FETCEF
Trigger: GAATTCACAGGTCTCAAAGCAGGAACAGTGGGTTTG...AGCCAGCTTCCCAGCAAGACAAAGGGCACCCTTGTGGCTTTGGGACCTAAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276416.11
ENST00000519513.5
CDS-3UTR CCA 90 bp CCCCAACCACTTAGGTCCCAAAGCCACAAGGGTGCCCTTTGTCTTGCTGGGAAGCTCTCTCCACTGTTTTaGGCACAATCTGTTTCTTGG +
Preference number: 4 (lower is better)
Translates to: PQPLRSQSHKGALCLAGKLSPLF*AQSVSW
Trigger: CCAAGAAACAGATTGTGCCCAAAACAGTGGAGAGAG...CTTCCCAGCAAGACAAAGGGCACCCTTGTGGCTTTGGGACCTAAGTGGTTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276416.11
ENST00000399977.8
CDS-3UTR CCA 90 bp ATGGTGGTGGTGACGGCGGCTCCCAGGGAAGGAACGCTTTCCTTTTGTGATCAGCTCTCTCCACTGTTTTaGGCACAATCTGTTTCTTGG +
Preference number: 4 (lower is better)
Translates to: MVVVTAAPREGTLSFCDQLSPLF*AQSVSW
Trigger: CCAAGAAACAGATTGTGCCCAAAACAGTGGAGAGAG...CTGATCACAAAAGGAAAGCGTTCCTTCCCTGGGAGCCGCCGTCACCACCACCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522687.5
CDS-3UTR CCA 90 bp CTGGTGCCAGGCTCAGGAAGAGTCATTCATTGCAAAGGGCCGGCAAGTGAACCAGCTCACAGAGGGGATTaGAGAGTAAGTCCAAGGATA +
Preference number: 4 (lower is better)
Translates to: LVPGSGRVIHCKGPASEPAHRGD*RVSPRI
Trigger: TATCCTTGGACTTACTCTCCAATCCCCTCTGTGAGC...TGGTTCACTTGCCGGCCCTTTGCAATGAATGACTCTTCCTGAGCCTGGCACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR CCA 90 bp TTCCTGATTGAAGGCATCCATCCGCTTCATGGCCGTGTCCAGGGCCGTCACCATTCGATCACAGTCTTCTaGATCTGGTTCACCTTTTCC +
Preference number: 4 (lower is better)
Translates to: FLIEGIHPLHGRVQGRHHSITVF*IWFTFS
Trigger: GGAAAAGGTGAACCAGATCCAGAAGACTGTGATCGA...ATGGTGACGGCCCTGGACACGGCCATGAAGCGGATGGATGCCTTCAATCAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522687.5
CDS-3UTR CCA 90 bp CTGGTGCCAGGCTCAGGAAGAGTCATTCATTGCAAAGGGCCGGCAAGTGAACCAACCTGTGAATTCTTGTaGGACAGTTCCACTGACAGC +
Preference number: 4 (lower is better)
Translates to: LVPGSGRVIHCKGPASEPTCEFL*DSSTDS
Trigger: GCTGTCAGTGGAACTGTCCCACAAGAATTCACAGGT...TGGTTCACTTGCCGGCCCTTTGCAATGAATGACTCTTCCTGAGCCTGGCACCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR GCA 90 bp GACGATGCAACGCTGCAGGTCCACACCGGCCTCGTCTTTGTGGATCATGTGTCCATCTGTTTCTTGGGCTaGCCAATCTTAAAAGGAATC +
Preference number: 4 (lower is better)
Translates to: DDATLQVHTGLVFVDHVSICFLG*PILKGI
Trigger: GATTCCTTTTAAGATTGGGCAGCCCAAGAAACAGAT...GGACACATGATCCACAAAGACGAGGCCGGTGTGGACCTGCAGCGTTGCATCGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520292.1
CDS-3UTR GCA 90 bp GGAGGTAGATTTGATGCCCACAACGCATGCAAGGCTAAGACCCCCAACTTAGCCGGAAGAGTCATTCATTaGAAAGGGCCGGCAAGTGAA +
Preference number: 4 (lower is better)
Translates to: GGRFDAHNACKAKTPNLAGRVIH*KGPASE
Trigger: TTCACTTGCCGGCCCTTTGCAATGAATGACTCTTCC...GGCTAAGTTGGGGGTCTTAGCCTTGCATGCGTTGTGGGCATCAAATCTACCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR GCA 90 bp GCTCGCCTAAGTTACAGCACAATACTATGTGGACGTTTCATTGAAAATTTTACTTCCCGAACCTGCGTCTaGCGCCGGGGTCCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: ARLSYSTILCGRFIENFTSRTCV*RRGPQP
Trigger: TGGCTGAGGACCCCGGCGGCAGACGCAGGTTCGGGA...AGTAAAATTTTCAATGAAACGTCCACATAGTATTGTGCTGTAACTTAGGCGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000276416.11
CDS-3UTR GCA 90 bp CCACTTAGGTCCCAAAGCCACAAGGGTGCCCTTTGTCTTGCTGGGAAGCTGGCTATCTGTTTCTTGGGCTaGCCAATCTTAAAAGGAATC +
Preference number: 4 (lower is better)
Translates to: PLRSQSHKGALCLAGKLAICFLG*PILKGI
Trigger: GATTCCTTTTAAGATTGGGCAGCCCAAGAAACAGAT...AGCCAGCTTCCCAGCAAGACAAAGGGCACCCTTGTGGCTTTGGGACCTAAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR GCA 90 bp CTTAGGTCCCAAAGCCACAAGGGTGCCCTTTGTCTTGCTGGGAAGCTGGCTGAGATCTGTTTCTTGGGCTaGCCAATCTTAAAAGGAATC +
Preference number: 4 (lower is better)
Translates to: LRSQSHKGALCLAGKLAEICFLG*PILKGI
Trigger: GATTCCTTTTAAGATTGGGCAGCCCAAGAAACAGAT...CTCAGCCAGCTTCCCAGCAAGACAAAGGGCACCCTTGTGGCTTTGGGACCTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR CCA 90 bp GATACTCAGGTGAGACACAAACCCACTGTTCCTGCTTTGAGACCTGTGAATTCTGCAGCTGCCTGTTCTTaGCTTCAAAGTCCTCCCGCA +
Preference number: 4 (lower is better)
Translates to: DTQVRHKPTVPALRPVNSAAACS*LQSPPA
Trigger: TGCGGGAGGACTTTGAAGCCAAGAACAGGCAGCTGC...AGAATTCACAGGTCTCAAAGCAGGAACAGTGGGTTTGTGTCTCACCTGAGTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276416.11
ENST00000519513.5
CDS-3UTR CCA 90 bp TGCAAGGCTAAGACCCCCAACTTAGCCAACGAAGCCCATGGCCTCAGAAGGGCTTTTGACATGGTGTTTTaGGCACAATCTGTTTCTTGG +
Preference number: 4 (lower is better)
Translates to: CKAKTPNLANEAHGLRRAFDMVF*AQSVSW
Trigger: CCAAGAAACAGATTGTGCCCAAAACACCATGTCAAA...AGCCCTTCTGAGGCCATGGGCTTCGTTGGCTAAGTTGGGGGTCTTAGCCTTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000519513.5
CDS-3UTR TCA 90 bp CAGGATGGGTCTTTTGGAGGTAGATTTGATGCCCACAACGCATGCAAGGCTAAGTTCCAGATACTCAGGTaGGACACAAACCCACTGTTC +
Preference number: 4 (lower is better)
Translates to: QDGSFGGRFDAHNACKAKFQILR*DTNPLF
Trigger: GAACAGTGGGTTTGTGTCTCACCTGAGTATCTGGAA...CTTAGCCTTGCATGCGTTGTGGGCATCAAATCTACCTCCAAAAGACCCATCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276416.11
ENST00000519513.5
CDS-3UTR CCA 90 bp GGAAGGGGTTTCCTCTGCTCGCCTAAGTTACAGCACAATACTATGTGGACGTTTATGTTCAGAAGGTCCTaGTCTTGCTCACAGAGGGGA +
Preference number: 4 (lower is better)
Translates to: GRGFLCSPKLQHNTMWTFMFRRS*SCSQRG
Trigger: TCCCCTCTGTGAGCAAGACCAGGACCTTCTGAACAT...AAACGTCCACATAGTATTGTGCTGTAACTTAGGCGAGCAGAGGAAACCCCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276416.11
CDS-3UTR CCA 90 bp CAAAGTTCCAACCAGCTGCTTCAGGAAAATGCCCTGAGGACCTCCACTGTGACTTCGATCACAGTCTTCTaGATCTGGTTCACCTTTTCC +
Preference number: 4 (lower is better)
Translates to: QSSNQLLQENALRTSTVTSITVF*IWFTFS
Trigger: GGAAAAGGTGAACCAGATCCAGAAGACTGTGATCGA...AGTCACAGTGGAGGTCCTCAGGGCATTTTCCTGAAGCAGCTGGTTGGAACTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520292.1
3UTR CAA 72 bp GATACTCAGGTGAGACACAAACCCACTGTTCCTGCTTaGAGACCTGTGAATTCTTGTGGGACAGTTCCACTG +
Preference number: 4 (lower is better)
Translates to: DTQVRHKPTVPA*RPVNSCGTVPL
Trigger: CAGTGGAACTGTCCCACAAGAATTCACAGGTCTCAAAGCAGGAACAGTGGGTTTGTGTCTCACCTGAGTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276416.11
ENST00000519513.5
CDS-3UTR TCA 90 bp GAGGTTCTAGATCCGCATAAGCAGGAAGAAGGCCCAGGTTGCTGTCTTCCCAGCGTTGATTCAAAGCTTTaGTTCTTATGCAAAGGCCAT +
Preference number: 4 (lower is better)
Translates to: EVLDPHKQEEGPGCCLPSVDSKL*FLCKGH
Trigger: ATGGCCTTTGCATAAGAATCAAAGCTTTGAATCAAC...GCTGGGAAGACAGCAACCTGGGCCTTCTTCCTGCTTATGCGGATCTAGAACCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522268.1
CDS-3UTR GCA 90 bp TGCTCACAGAGGGGATTGGAGAGTAAGTCCAAGGATATCTTCACGGCAGATTTTTTCTTCATGTCTTTCTaGAGCCTCCGGGTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: CSQRGLESKSKDIFTADFFFMSF*SLRVCS
Trigger: AGAGCAGACCCGGAGGCTGCAGAAAGACATGAAGAA...AAAATCTGCCGTGAAGATATCCTTGGACTTACTCTCCAATCCCCTCTGTGAGCA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000522687.5
CDS-3UTR CCA 90 bp TGCTCACAGAGGGGATTGGAGAGTAAGTCCAAGGATATCTTCACGGCAGATTTTATGTTCAGAAGGTCCTaGTCTTGCTCACAGAGGGGA +
Preference number: 4 (lower is better)
Translates to: CSQRGLESKSKDIFTADFMFRRS*SCSQRG
Trigger: TCCCCTCTGTGAGCAAGACCAGGACCTTCTGAACAT...AAAATCTGCCGTGAAGATATCCTTGGACTTACTCTCCAATCCCCTCTGTGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000522687.5
CDS-3UTR CCA 90 bp CAGGATGGGTCTTTTGGAGGTAGATTTGATGCCCACAACGCATGCAAGGCTAAGTCGATCACAGTCTTCTaGATCTGGTTCACCTTTTCC +
Preference number: 4 (lower is better)
Translates to: QDGSFGGRFDAHNACKAKSITVF*IWFTFS
Trigger: GGAAAAGGTGAACCAGATCCAGAAGACTGTGATCGA...CTTAGCCTTGCATGCGTTGTGGGCATCAAATCTACCTCCAAAAGACCCATCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR TCA 90 bp AGGGGTTTCCTCTGCTCGCCTAAGTTACAGCACAATACTATGTGGACGTTTCATTGCTCTTCCAGCTGCTaGAGTTTTCCATACTCCCTT +
Preference number: 4 (lower is better)
Translates to: RGFLCSPKLQHNTMWTFHCSSSC*SFPYSL
Trigger: AAGGGAGTATGGAAAACTTCAGCAGCTGGAAGAGCA...ATGAAACGTCCACATAGTATTGTGCTGTAACTTAGGCGAGCAGAGGAAACCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276416.11
CDS-3UTR TCA 90 bp CTATGTGAGGTTCTAGATCCGCATAAGCAGGAAGAAGGCCCAGGTTGCTGTCTTTATGCAAAGGCCATGTaGTACAGAACTGAATCTCAC +
Preference number: 4 (lower is better)
Translates to: LCEVLDPHKQEEGPGCCLYAKAM*YRTESH
Trigger: GTGAGATTCAGTTCTGTATCACATGGCCTTTGCATA...AAGACAGCAACCTGGGCCTTCTTCCTGCTTATGCGGATCTAGAACCTCACATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522268.1
CDS-3UTR GCA 90 bp GATACTCAGGTGAGACACAAACCCACTGTTCCTGCTTTGAGACCTGTGAATTCTGGAAGAGTCATTCATTaGAAAGGGCCGGCAAGTGAA +
Preference number: 4 (lower is better)
Translates to: DTQVRHKPTVPALRPVNSGRVIH*KGPASE
Trigger: TTCACTTGCCGGCCCTTTGCAATGAATGACTCTTCC...AGAATTCACAGGTCTCAAAGCAGGAACAGTGGGTTTGTGTCTCACCTGAGTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276416.11
ENST00000519513.5
CDS-3UTR CCA 90 bp GGAAGGGGTTTCCTCTGCTCGCCTAAGTTACAGCACAATACTATGTGGACGTTTTCGATCACAGTCTTCTaGATCTGGTTCACCTTTTCC +
Preference number: 4 (lower is better)
Translates to: GRGFLCSPKLQHNTMWTFSITVF*IWFTFS
Trigger: GGAAAAGGTGAACCAGATCCAGAAGACTGTGATCGA...AAACGTCCACATAGTATTGTGCTGTAACTTAGGCGAGCAGAGGAAACCCCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000276416.11
CDS-3UTR GCA 90 bp CTATGTGAGGTTCTAGATCCGCATAAGCAGGAAGAAGGCCCAGGTTGCTGTCTTATCTGTTTCTTGGGCTaGCCAATCTTAAAAGGAATC +
Preference number: 4 (lower is better)
Translates to: LCEVLDPHKQEEGPGCCLICFLG*PILKGI
Trigger: GATTCCTTTTAAGATTGGGCAGCCCAAGAAACAGAT...AAGACAGCAACCTGGGCCTTCTTCCTGCTTATGCGGATCTAGAACCTCACATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522268.1
CDS-3UTR GCA 90 bp GAAGGTCCTGGTCTTGCTCACAGAGGGGATTGGAGAGTAAGTCCAAGGATATCTTCCTTTTGTGATCAGTaGTTTGTAGGAAAGGTGTGT +
Preference number: 4 (lower is better)
Translates to: EGPGLAHRGDWRVSPRISSFCDQ*FVGKVC
Trigger: ACACACCTTTCCTACAAAGCACTGATCACAAAAGGA...AGATATCCTTGGACTTACTCTCCAATCCCCTCTGTGAGCAAGACCAGGACCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522687.5
CDS-3UTR TCA 90 bp GCTCGCCTAAGTTACAGCACAATACTATGTGGACGTTTCATTGAAAATTTTACTCTTCACGGCAGATTTTaGCATGGCCAGGTCTGCGTC +
Preference number: 4 (lower is better)
Translates to: ARLSYSTILCGRFIENFTLHGRF*HGQVCV
Trigger: GACGCAGACCTGGCCATGTCAAAATCTGCCGTGAAG...AGTAAAATTTTCAATGAAACGTCCACATAGTATTGTGCTGTAACTTAGGCGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000276416.11
CDS-3UTR TCA 90 bp CTATGTGAGGTTCTAGATCCGCATAAGCAGGAAGAAGGCCCAGGTTGCTGTCTTCATGTGATACAGAACTaGATCTCACAGCAAAACAAT +
Preference number: 4 (lower is better)
Translates to: LCEVLDPHKQEEGPGCCLHVIQN*ISQQNN
Trigger: ATTGTTTTGCTGTGAGATTCAGTTCTGTATCACATG...AAGACAGCAACCTGGGCCTTCTTCCTGCTTATGCGGATCTAGAACCTCACATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522268.1
CDS-3UTR TCA 90 bp GCTCGCCTAAGTTACAGCACAATACTATGTGGACGTTTCATTGAAAATTTTACTTCACCTTTTCCTGATTaGAGGCATCCATCCGCTTCA +
Preference number: 4 (lower is better)
Translates to: ARLSYSTILCGRFIENFTSPFPD*RHPSAS
Trigger: TGAAGCGGATGGATGCCTTCAATCAGGAAAAGGTGA...AGTAAAATTTTCAATGAAACGTCCACATAGTATTGTGCTGTAACTTAGGCGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000276416.11
CDS-3UTR GCA 90 bp GCTCGCCTAAGTTACAGCACAATACTATGTGGACGTTTCATTGAAAATTTTACTCAAACCCACTGTTCCTaGTTTGAGACCTGTGAATTC +
Preference number: 4 (lower is better)
Translates to: ARLSYSTILCGRFIENFTQTHCS*FETCEF
Trigger: GAATTCACAGGTCTCAAAGCAGGAACAGTGGGTTTG...AGTAAAATTTTCAATGAAACGTCCACATAGTATTGTGCTGTAACTTAGGCGAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276416.11
CDS-3UTR CAA 90 bp GGACCACGGTGCAGTTCGCTCCAGAAGGTGGGCCAGGGCCGGGGAGGTGCGCACAGGGTGCCCTTTGTCTaGCTGGGAAGCTGGCTGAGG +
Preference number: 5 (lower is better)
Translates to: GPRCSSLQKVGQGRGGAHRVPFV*LGSWLR
Trigger: CCTCAGCCAGCTTCCCAGCAAGACAAAGGGCACCCT...GTGCGCACCTCCCCGGCCCTGGCCCACCTTCTGGAGCGAACTGCACCGTGGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276416.11
CDS-3UTR CAA 90 bp GCTGCTCCGTGGAGGGCAGCAGGCCCAGGAAGGGGTTTCCTCTGCTCGCCTAAGCCTACTCTCCTAGGCTaGCCCGCGTGCCCTCCCACC +
Preference number: 5 (lower is better)
Translates to: AAPWRAAGPGRGFLCSPKPTLLG*PACPPT
Trigger: GGTGGGAGGGCACGCGGGCAAGCCTAGGAGAGTAGG...CTTAGGCGAGCAGAGGAAACCCCTTCCTGGGCCTGCTGCCCTCCACGGAGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276416.11
CDS GCA 90 bp ATGGCCATTGCCAGGGAACAGTTCCAGCAGCCTGGTGACCTGAGCTaGCCTCAGCTTCCAGGGTGCTCACGGGGCAGGGCACGGGGCAGA +
Preference number: 5 (lower is better)
Translates to: MAIAREQFQQPGDLS*PQLPGCSRGRARGR
Trigger: TCTGCCCCGTGCCCTGCCCCGTGAGCACCCTGGAAGCTGAGGGCAGCTCAGGTCACCAGGCTGCTGGAACTGTTCCCTGGCAATGGCCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518366.1
CDS GCA 90 bp CCTCGGTGCAATGGCAGGGGGCGTCTACCAGGCAAGCCAGAGCCCTaGAGTGTCCAGGATCAGGCTGCGCAGCCCAGGGAGCTCATGACT +
Preference number: 5 (lower is better)
Translates to: PRCNGRGRLPGKPEP*SVQDQAAQPRELMT
Trigger: AGTCATGAGCTCCCTGGGCTGCGCAGCCTGATCCTGGACACTGCAGGGCTCTGGCTTGCCTGGTAGACGCCCCCTGCCATTGCACCGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000520292.1
ENST00000520489.5
CDS-3UTR CAA 90 bp CGCTCCAGAAGGTGGGCCAGGGCCGGGGAGGTGCGCACACACCCCTGGCATGCTCAGAAGGTCCTGGTCTaGCTCACAGAGGGGATTGGA +
Preference number: 5 (lower is better)
Translates to: RSRRWARAGEVRTHPWHAQKVLV*LTEGIG
Trigger: TCCAATCCCCTCTGTGAGCAAGACCAGGACCTTCTG...AGCATGCCAGGGGTGTGTGCGCACCTCCCCGGCCCTGGCCCACCTTCTGGAGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000276416.11
CDS GCA 90 bp CCCCAGCAATGCTGCCTGGTTAAAGGGCATCCCTGGCCTCCCATCTaGTCCAACCTGGACACGCGGGAGCCTGGCACCCTGTGGCTTCCT +
Preference number: 5 (lower is better)
Translates to: PQQCCLVKGHPWPPI*SNLDTREPGTLWLP
Trigger: AGGAAGCCACAGGGTGCCAGGCTCCCGCGTGTCCAGGTTGGAGCAGATGGGAGGCCAGGGATGCCCTTTAACCAGGCAGCATTGCTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519863.5
CDS CCA 90 bp GCAGTCAACAGCCCCCAGCAATGCTGCCTGGTTAAAGGGCATCCCTaGCCTCCCATCTGCTCCAACCTGGACACGCGGGAGCCTGGCACC +
Preference number: 5 (lower is better)
Translates to: AVNSPQQCCLVKGHP*PPICSNLDTREPGT
Trigger: GGTGCCAGGCTCCCGCGTGTCCAGGTTGGAGCAGATGGGAGGCCAGGGATGCCCTTTAACCAGGCAGCATTGCTGGGGGCTGTTGACTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519863.5
CDS-3UTR CAA 90 bp GGACCACGGTGCAGTTCGCTCCAGAAGGTGGGCCAGGGCCGGGGAGGTGCGCACTCTTCACGGCAGATTTaGACATGGCCAGGTCTGCGT +
Preference number: 5 (lower is better)
Translates to: GPRCSSLQKVGQGRGGAHSSRQI*TWPGLR
Trigger: ACGCAGACCTGGCCATGTCAAAATCTGCCGTGAAGA...GTGCGCACCTCCCCGGCCCTGGCCCACCTTCTGGAGCGAACTGCACCGTGGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276416.11
CDS TCA 90 bp GCAGACACCACCAGGATGCATAGTCGCCCATGGCGTGGGCTGGGGTaGGACTGCTGGGAGGAGCTAGACTTGATGCTTTGCCCAGGGCGG +
Preference number: 5 (lower is better)
Translates to: ADTTRMHSRPWRGLG*DCWEELDLMLCPGR
Trigger: CCGCCCTGGGCAAAGCATCAAGTCTAGCTCCTCCCAGCAGTCTCACCCCAGCCCACGCCATGGGCGACTATGCATCCTGGTGGTGTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520489.5
CDS GCA 90 bp CCTCAGCACTACGGAACTGAGGGTGGGAAGCAGACACCACCAGGATaGATAGTCGCCCATGGCGTGGGCTGGGGTGAGACTGCTGGGAGG +
Preference number: 5 (lower is better)
Translates to: PQHYGTEGGKQTPPG*IVAHGVGWGETAGR
Trigger: CCTCCCAGCAGTCTCACCCCAGCCCACGCCATGGGCGACTATGCATCCTGGTGGTGTCTGCTTCCCACCCTCAGTTCCGTAGTGCTGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520489.5
CDS-3UTR CAA 90 bp CCCCAACCACTTAGGTCCCAAAGCCACAAGGGTGCCCTTTGTCTTGCTGGGAAGCGTGCCTGGTGGAGCTaGGCCAGCACTGGCCCCGTC +
Preference number: 5 (lower is better)
Translates to: PQPLRSQSHKGALCLAGKRAWWS*ASTGPV
Trigger: GACGGGGCCAGTGCTGGCCAAGCTCCACCAGGCACG...CTTCCCAGCAAGACAAAGGGCACCCTTGTGGCTTTGGGACCTAAGTGGTTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR CAA 90 bp CTTAGGTCCCAAAGCCACAAGGGTGCCCTTTGTCTTGCTGGGAAGCTGGCTGAGCGTGCCTGGTGGAGCTaGGCCAGCACTGGCCCCGTC +
Preference number: 5 (lower is better)
Translates to: LRSQSHKGALCLAGKLAERAWWS*ASTGPV
Trigger: GACGGGGCCAGTGCTGGCCAAGCTCCACCAGGCACG...CTCAGCCAGCTTCCCAGCAAGACAAAGGGCACCCTTGTGGCTTTGGGACCTAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR CAA 90 bp AGAAGGGCTGCAGCTTGCTCAGGCCGTGGGCCAGGATGCATGCTGGACGGTTCTCGGAGCTCACTGAGTTaGGCCTCGTTCTCCCGCTCC +
Preference number: 5 (lower is better)
Translates to: RRAAACSGRGPGCMLDGSRSSLS*ASFSRS
Trigger: GGAGCGGGAGAACGAGGCCAAACTCAGTGAGCTCCG...AGAACCGTCCAGCATGCATCCTGGCCCACGGCCTGAGCAAGCTGCAGCCCTTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS TCA 90 bp CCAGGACTGTGCACAGAGAACGCGGGCCCCTCAGCACTACGGAACTaGGGGTGGGAAGCAGACACCACCAGGATGCATAGTCGCCCATGG +
Preference number: 5 (lower is better)
Translates to: PGLCTENAGPSALRN*GWEADTTRMHSRPW
Trigger: CCATGGGCGACTATGCATCCTGGTGGTGTCTGCTTCCCACCCTCAGTTCCGTAGTGCTGAGGGGCCCGCGTTCTCTGTGCACAGTCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520489.5
CDS TCA 90 bp AGCCCTGCAGTGTCCAGGATCAGGCTGCGCAGCCCAGGGAGCTCATaGCTCTGTGGCCATTCGGAGGTGACCCAGGACCAGAAGAGTTGG +
Preference number: 5 (lower is better)
Translates to: SPAVSRIRLRSPGSS*LCGHSEVTQDQKSW
Trigger: CCAACTCTTCTGGTCCTGGGTCACCTCCGAATGGCCACAGAGTCATGAGCTCCCTGGGCTGCGCAGCCTGATCCTGGACACTGCAGGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000520292.1
ENST00000520489.5
ENST00000640731.1
CDS-3UTR CAA 90 bp GTGCCAGGCTCAGGAAGAGTCATTCATTGCAAAGGGCCGGCAAGTGAACCAGGGCAGAAGGGCTGCAGCTaGCTCAGGCCGTGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: VPGSGRVIHCKGPASEPGQKGCS*LRPWAR
Trigger: CCTGGCCCACGGCCTGAGCAAGCTGCAGCCCTTCTG...CCCTGGTTCACTTGCCGGCCCTTTGCAATGAATGACTCTTCCTGAGCCTGGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS TCA 90 bp TCCTGTAGTCCTGCAAGGCCTGTTCCCGCCTCTTCACAGCCATGTTaGGGCTCGGGAAGACACTGCCGAACCTGTGGGACAAGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: SCSPARPVPASSQPC*GSGRHCRTCGTSWL
Trigger: CAGCCAGCTTGTCCCACAGGTTCGGCAGTGTCTTCCCGAGCCTCAACATGGCTGTGAAGAGGCGGGAACAGGCCTTGCAGGACTACAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520489.5
CDS CCA 90 bp ATAGTAATCAAACCAGCATCTGACCGACTTGCCGGGCAGAAGCCATaGGCCTCCCAGGACTGTGCACAGAGAACGCGGGCCCCTCAGCAC +
Preference number: 5 (lower is better)
Translates to: IVIKPASDRLAGQKP*ASQDCAQRTRAPQH
Trigger: GTGCTGAGGGGCCCGCGTTCTCTGTGCACAGTCCTGGGAGGCCCATGGCTTCTGCCCGGCAAGTCGGTCAGATGCTGGTTTGATTACTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520489.5
CDS CCA 90 bp AGTGTCCAGGATCAGGCTGCGCAGCCCAGGGAGCTCATGACTCTGTaGCCATTCGGAGGTGACCCAGGACCAGAAGAGTTGGTTCCTCCT +
Preference number: 5 (lower is better)
Translates to: SVQDQAAQPRELMTL*PFGGDPGPEELVPP
Trigger: AGGAGGAACCAACTCTTCTGGTCCTGGGTCACCTCCGAATGGCCACAGAGTCATGAGCTCCCTGGGCTGCGCAGCCTGATCCTGGACACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520489.5
CDS-3UTR CAA 90 bp CCACGGTGCAGTTCGCTCCAGAAGGTGGGCCAGGGCCGGGGAGGTGCGCACACAGGCACAATCTGTTTCTaGGGCTGCCCAATCTTAAAA +
Preference number: 5 (lower is better)
Translates to: PRCSSLQKVGQGRGGAHTGTICF*GCPILK
Trigger: TTTTAAGATTGGGCAGCCCAAGAAACAGATTGTGCC...TGTGTGCGCACCTCCCCGGCCCTGGCCCACCTTCTGGAGCGAACTGCACCGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276416.11
CDS-3UTR CAA 90 bp CTTAGGTCCCAAAGCCACAAGGGTGCCCTTTGTCTTGCTGGGAAGCTGGCTGAGCGGAGCTCACTGAGTTaGGCCTCGTTCTCCCGCTCC +
Preference number: 5 (lower is better)
Translates to: LRSQSHKGALCLAGKLAERSSLS*ASFSRS
Trigger: GGAGCGGGAGAACGAGGCCAAACTCAGTGAGCTCCG...CTCAGCCAGCTTCCCAGCAAGACAAAGGGCACCCTTGTGGCTTTGGGACCTAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR CAA 90 bp AAGGGCTGCAGCTTGCTCAGGCCGTGGGCCAGGATGCATGCTGGACGGTTCTCCCCCAGGATGGGTCTTTaGGAGGTAGATTTGATGCCC +
Preference number: 5 (lower is better)
Translates to: KGCSLLRPWARMHAGRFSPRMGL*EVDLMP
Trigger: GGGCATCAAATCTACCTCCAAAAGACCCATCCTGGG...GGAGAACCGTCCAGCATGCATCCTGGCCCACGGCCTGAGCAAGCTGCAGCCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS CCA 90 bp AGTGTCCAGGATCAGGCTGCGCAGCCCAGGGAGCTCATGACTCTGTaGCCATTCGGAGGTGACCCAGGACCAGAAGAGTTGGTTCCTCTT +
Preference number: 5 (lower is better)
Translates to: SVQDQAAQPRELMTL*PFGGDPGPEELVPL
Trigger: AAGAGGAACCAACTCTTCTGGTCCTGGGTCACCTCCGAATGGCCACAGAGTCATGAGCTCCCTGGGCTGCGCAGCCTGATCCTGGACACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000520292.1
ENST00000640731.1
CDS-3UTR CAA 90 bp CTCAGAGAGAGCAGCAGTGGACGATGCAACGCTGCAGGTCCACACCGGCCTCGTTCTTCACGGCAGATTTaGACATGGCCAGGTCTGCGT +
Preference number: 5 (lower is better)
Translates to: LRESSSGRCNAAGPHRPRSSRQI*TWPGLR
Trigger: ACGCAGACCTGGCCATGTCAAAATCTGCCGTGAAGA...ACGAGGCCGGTGTGGACCTGCAGCGTTGCATCGTCCACTGCTGCTCTCTCTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520292.1
CDS-3UTR CAA 90 bp CATGGCCTCAGAAGGGCTGCAGCTTGCTCAGGCCGTGGGCCAGGATGCATGCTGTGCTCACAGAGGGGATaGGAGAGTAAGTCCAAGGAT +
Preference number: 5 (lower is better)
Translates to: HGLRRAAACSGRGPGCMLCSQRG*ESKSKD
Trigger: ATCCTTGGACTTACTCTCCAATCCCCTCTGTGAGCA...CAGCATGCATCCTGGCCCACGGCCTGAGCAAGCTGCAGCCCTTCTGAGGCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR CAA 90 bp CAGGATGGGTCTTTTGGAGGTAGATTTGATGCCCACAACGCATGCAAGGCTAAGCGTGCCTGGTGGAGCTaGGCCAGCACTGGCCCCGTC +
Preference number: 5 (lower is better)
Translates to: QDGSFGGRFDAHNACKAKRAWWS*ASTGPV
Trigger: GACGGGGCCAGTGCTGGCCAAGCTCCACCAGGCACG...CTTAGCCTTGCATGCGTTGTGGGCATCAAATCTACCTCCAAAAGACCCATCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR CAA 90 bp GGCCTGCCTAGGGCTCCTGGTGCCAGGCTCAGGAAGAGTCATTCATTGCAAAGGAGCAGCTGCCTGTTCTaGGCTTCAAAGTCCTCCCGC +
Preference number: 5 (lower is better)
Translates to: GLPRAPGARLRKSHSLQRSSCLF*ASKSSR
Trigger: GCGGGAGGACTTTGAAGCCAAGAACAGGCAGCTGCT...CCTTTGCAATGAATGACTCTTCCTGAGCCTGGCACCAGGAGCCCTAGGCAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR CAA 90 bp ATGGCCTCAGAAGGGCTGCAGCTTGCTCAGGCCGTGGGCCAGGATGCATGCTGGAAAAGCCCCAAGGGTTaGTCTACACTGCTTACCTGC +
Preference number: 5 (lower is better)
Translates to: MASEGLQLAQAVGQDACWKSPKG*STLLTC
Trigger: GCAGGTAAGCAGTGTAGACAAACCCTTGGGGCTTTT...CCAGCATGCATCCTGGCCCACGGCCTGAGCAAGCTGCAGCCCTTCTGAGGCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR CAA 90 bp GGCCAGAGGGCTCCCCAGGATGGGTCTTTTGGAGGTAGATTTGATGCCCACAACAGGGTGCCCTTTGTCTaGCTGGGAAGCTGGCTGAGG +
Preference number: 5 (lower is better)
Translates to: GQRAPQDGSFGGRFDAHNRVPFV*LGSWLR
Trigger: CCTCAGCCAGCTTCCCAGCAAGACAAAGGGCACCCT...GTTGTGGGCATCAAATCTACCTCCAAAAGACCCATCCTGGGGAGCCCTCTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR CAA 90 bp CGGGAACCCCAACCACTTAGGTCCCAAAGCCACAAGGGTGCCCTTTGTCTTGCTAGGGTGCCCTTTGTCTaGCTGGGAAGCTGGCTGAGG +
Preference number: 5 (lower is better)
Translates to: REPQPLRSQSHKGALCLARVPFV*LGSWLR
Trigger: CCTCAGCCAGCTTCCCAGCAAGACAAAGGGCACCCT...AGCAAGACAAAGGGCACCCTTGTGGCTTTGGGACCTAAGTGGTTGGGGTTCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR CAA 90 bp TGCAAGGCTAAGACCCCCAACTTAGCCAACGAAGCCCATGGCCTCAGAAGGGCTCCACAAGGGTGCCCTTaGTCTTGCTGGGAAGCTGGC +
Preference number: 5 (lower is better)
Translates to: CKAKTPNLANEAHGLRRAPQGCP*SCWEAG
Trigger: GCCAGCTTCCCAGCAAGACAAAGGGCACCCTTGTGG...AGCCCTTCTGAGGCCATGGGCTTCGTTGGCTAAGTTGGGGGTCTTAGCCTTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR CAA 90 bp GTGCCAGGCTCAGGAAGAGTCATTCATTGCAAAGGGCCGGCAAGTGAACCAGGGCCACAAGGGTGCCCTTaGTCTTGCTGGGAAGCTGGC +
Preference number: 5 (lower is better)
Translates to: VPGSGRVIHCKGPASEPGPQGCP*SCWEAG
Trigger: GCCAGCTTCCCAGCAAGACAAAGGGCACCCTTGTGG...CCCTGGTTCACTTGCCGGCCCTTTGCAATGAATGACTCTTCCTGAGCCTGGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS CCA 90 bp TCCACATTCTCTGTCTGGCACCCTTTCCAGCCCTCACAGTGCCACTaGCAGGTGGCAGAACTGAAATCTAAACTCACCCCTGCCCCAGGG +
Preference number: 5 (lower is better)
Translates to: STFSVWHPFQPSQCH*QVAELKSKLTPAPG
Trigger: CCCTGGGGCAGGGGTGAGTTTAGATTTCAGTTCTGCCACCTGCCAGTGGCACTGTGAGGGCTGGAAAGGGTGCCAGACAGAGAATGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520489.5
CDS-3UTR CAA 90 bp CTTAGGTCCCAAAGCCACAAGGGTGCCCTTTGTCTTGCTGGGAAGCTGGCTGAGAGCAGCTGCCTGTTCTaGGCTTCAAAGTCCTCCCGC +
Preference number: 5 (lower is better)
Translates to: LRSQSHKGALCLAGKLAESSCLF*ASKSSR
Trigger: GCGGGAGGACTTTGAAGCCAAGAACAGGCAGCTGCT...CTCAGCCAGCTTCCCAGCAAGACAAAGGGCACCCTTGTGGCTTTGGGACCTAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR CAA 90 bp CAGGATGGGTCTTTTGGAGGTAGATTTGATGCCCACAACGCATGCAAGGCTAAGCAGAAGGGCTGCAGCTaGCTCAGGCCGTGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: QDGSFGGRFDAHNACKAKQKGCS*LRPWAR
Trigger: CCTGGCCCACGGCCTGAGCAAGCTGCAGCCCTTCTG...CTTAGCCTTGCATGCGTTGTGGGCATCAAATCTACCTCCAAAAGACCCATCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS GCA 90 bp CAGGTGTCCACATTCTCTGTCTGGCACCCTTTCCAGCCCTCACAGTaGCACTGGCAGGTGGCAGAACTGAAATCTAAACTCACCCCTGCC +
Preference number: 5 (lower is better)
Translates to: QVSTFSVWHPFQPSQ*HWQVAELKSKLTPA
Trigger: GGCAGGGGTGAGTTTAGATTTCAGTTCTGCCACCTGCCAGTGGCACTGTGAGGGCTGGAAAGGGTGCCAGACAGAGAATGTGGACACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520489.5
CDS-3UTR CAA 90 bp GCCCTCAGAGAGAGCAGCAGTGGACGATGCAACGCTGCAGGTCCACACCGGCCTGGCACAATCTGTTTCTaGGGCTGCCCAATCTTAAAA +
Preference number: 5 (lower is better)
Translates to: ALRESSSGRCNAAGPHRPGTICF*GCPILK
Trigger: TTTTAAGATTGGGCAGCCCAAGAAACAGATTGTGCC...AGGCCGGTGTGGACCTGCAGCGTTGCATCGTCCACTGCTGCTCTCTCTGAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520292.1
CDS-3UTR CAA 90 bp AAGGGCTGCAGCTTGCTCAGGCCGTGGGCCAGGATGCATGCTGGACGGTTCTCCTCTCTCTCCACTGTTTaGGGCACAATCTGTTTCTTG +
Preference number: 5 (lower is better)
Translates to: KGCSLLRPWARMHAGRFSSLSTV*GTICFL
Trigger: CAAGAAACAGATTGTGCCCAAAACAGTGGAGAGAGA...GGAGAACCGTCCAGCATGCATCCTGGCCCACGGCCTGAGCAAGCTGCAGCCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276416.11
ENST00000399977.8
CDS-3UTR CAA 90 bp AGAGAGAGCAGCAGTGGACGATGCAACGCTGCAGGTCCACACCGGCCTCGTCTTTGCTCACAGAGGGGATaGGAGAGTAAGTCCAAGGAT +
Preference number: 5 (lower is better)
Translates to: RESSSGRCNAAGPHRPRLCSQRG*ESKSKD
Trigger: ATCCTTGGACTTACTCTCCAATCCCCTCTGTGAGCA...AAGACGAGGCCGGTGTGGACCTGCAGCGTTGCATCGTCCACTGCTGCTCTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520292.1
CDS-3UTR CAA 90 bp GTGCCAGGCTCAGGAAGAGTCATTCATTGCAAAGGGCCGGCAAGTGAACCAGGGCAGAAGGTCCTGGTCTaGCTCACAGAGGGGATTGGA +
Preference number: 5 (lower is better)
Translates to: VPGSGRVIHCKGPASEPGQKVLV*LTEGIG
Trigger: TCCAATCCCCTCTGTGAGCAAGACCAGGACCTTCTG...CCCTGGTTCACTTGCCGGCCCTTTGCAATGAATGACTCTTCCTGAGCCTGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR CAA 90 bp AGAGTCATTCATTGCAAAGGGCCGGCAAGTGAACCAGGGCCACCTCTGTCCCCACTCTTCACAGCCATGTaGAGGCTCGGGAAGACACTG +
Preference number: 5 (lower is better)
Translates to: RVIHCKGPASEPGPPLSPLFTAM*RLGKTL
Trigger: CAGTGTCTTCCCGAGCCTCAACATGGCTGTGAAGAG...TGGGGACAGAGGTGGCCCTGGTTCACTTGCCGGCCCTTTGCAATGAATGACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR CAA 90 bp TGCAAGGCTAAGACCCCCAACTTAGCCAACGAAGCCCATGGCCTCAGAAGGGCTAGTTCCACTGACAGCTaGCGTTCCCGAGGTACCAGT +
Preference number: 5 (lower is better)
Translates to: CKAKTPNLANEAHGLRRASSTDS*RSRGTS
Trigger: ACTGGTACCTCGGGAACGCAAGCTGTCAGTGGAACT...AGCCCTTCTGAGGCCATGGGCTTCGTTGGCTAAGTTGGGGGTCTTAGCCTTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR CAA 90 bp AGAAGGGCTGCAGCTTGCTCAGGCCGTGGGCCAGGATGCATGCTGGACGGTTCTTCTTCACGGCAGATTTaGACATGGTGTTTTGGGCAC +
Preference number: 5 (lower is better)
Translates to: RRAAACSGRGPGCMLDGSSSRQI*TWCFGH
Trigger: GTGCCCAAAACACCATGTCAAAATCTGCCGTGAAGA...AGAACCGTCCAGCATGCATCCTGGCCCACGGCCTGAGCAAGCTGCAGCCCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519513.5
CDS-3UTR CAA 90 bp CTCAGAGAGAGCAGCAGTGGACGATGCAACGCTGCAGGTCCACACCGGCCTCGTTCTCTCTCCACTGTTTaGGGCACAATCTGTTTCTTG +
Preference number: 5 (lower is better)
Translates to: LRESSSGRCNAAGPHRPRSLSTV*GTICFL
Trigger: CAAGAAACAGATTGTGCCCAAAACAGTGGAGAGAGA...ACGAGGCCGGTGTGGACCTGCAGCGTTGCATCGTCCACTGCTGCTCTCTCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520292.1
CDS-3UTR CAA 90 bp CTGGTGCCAGGCTCAGGAAGAGTCATTCATTGCAAAGGGCCGGCAAGTGAACCACAGAAGGTCCTGGTCTaGCTCACAGAGGGGATTGGA +
Preference number: 5 (lower is better)
Translates to: LVPGSGRVIHCKGPASEPQKVLV*LTEGIG
Trigger: TCCAATCCCCTCTGTGAGCAAGACCAGGACCTTCTG...TGGTTCACTTGCCGGCCCTTTGCAATGAATGACTCTTCCTGAGCCTGGCACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR CAA 90 bp TGTGGGACAGTTCCACTGACAGCTTGCGTTCCCGAGGTACCAGTCCTCAGTGACCCCAGGATGGGTCTTTaGGAGGTAGATTTGATGCCC +
Preference number: 5 (lower is better)
Translates to: CGTVPLTACVPEVPVLSDPRMGL*EVDLMP
Trigger: GGGCATCAAATCTACCTCCAAAAGACCCATCCTGGG...GTCACTGAGGACTGGTACCTCGGGAACGCAAGCTGTCAGTGGAACTGTCCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR CAA 90 bp TGCAAGGCTAAGACCCCCAACTTAGCCAACGAAGCCCATGGCCTCAGAAGGGCTCCCAGGATGGGTCTTTaGGAGGTAGATTTGATGCCC +
Preference number: 5 (lower is better)
Translates to: CKAKTPNLANEAHGLRRAPRMGL*EVDLMP
Trigger: GGGCATCAAATCTACCTCCAAAAGACCCATCCTGGG...AGCCCTTCTGAGGCCATGGGCTTCGTTGGCTAAGTTGGGGGTCTTAGCCTTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS TCA 90 bp TTCCCGCTGACTGAAGTGCCACTACACCCAAAGGCTATGAGTGAATaGCTCTCACATGGCCATTGCCAGGGAACAGTTCCAGCAGCCTGG +
Preference number: 5 (lower is better)
Translates to: FPLTEVPLHPKAMSE*LSHGHCQGTVPAAW
Trigger: CCAGGCTGCTGGAACTGTTCCCTGGCAATGGCCATGTGAGAGTCATTCACTCATAGCCTTTGGGTGTAGTGGCACTTCAGTCAGCGGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518366.1
CDS TCA 90 bp AGACCCTGCTCTAGGTCTTGGGGAGTTCACTGTGAACAAGACAGATaGGGCCCTGTCCCCTGGAGCTTGTGCGAACGTGGACAATGTCAT +
Preference number: 5 (lower is better)
Translates to: RPCSRSWGVHCEQDR*GPVPWSLCERGQCH
Trigger: ATGACATTGTCCACGTTCGCACAAGCTCCAGGGGACAGGGCCTCATCTGTCTTGTTCACAGTGAACTCCCCAAGACCTAGAGCAGGGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520489.5
CDS-3UTR CAA 90 bp CCCAACTTAGCCAACGAAGCCCATGGCCTCAGAAGGGCTGCAGCTTGCTCAGGCTCTCTCTCCACTGTTTaGGGCACAATCTGTTTCTTG +
Preference number: 5 (lower is better)
Translates to: PNLANEAHGLRRAAACSGSLSTV*GTICFL
Trigger: CAAGAAACAGATTGTGCCCAAAACAGTGGAGAGAGA...GCCTGAGCAAGCTGCAGCCCTTCTGAGGCCATGGGCTTCGTTGGCTAAGTTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276416.11
ENST00000399977.8
CDS-3UTR CAA 90 bp TGTGGGACAGTTCCACTGACAGCTTGCGTTCCCGAGGTACCAGTCCTCAGTGACTGCTCACAGAGGGGATaGGAGAGTAAGTCCAAGGAT +
Preference number: 5 (lower is better)
Translates to: CGTVPLTACVPEVPVLSDCSQRG*ESKSKD
Trigger: ATCCTTGGACTTACTCTCCAATCCCCTCTGTGAGCA...GTCACTGAGGACTGGTACCTCGGGAACGCAAGCTGTCAGTGGAACTGTCCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR CAA 90 bp TGCAAGGCTAAGACCCCCAACTTAGCCAACGAAGCCCATGGCCTCAGAAGGGCTTGCTCACAGAGGGGATaGGAGAGTAAGTCCAAGGAT +
Preference number: 5 (lower is better)
Translates to: CKAKTPNLANEAHGLRRACSQRG*ESKSKD
Trigger: ATCCTTGGACTTACTCTCCAATCCCCTCTGTGAGCA...AGCCCTTCTGAGGCCATGGGCTTCGTTGGCTAAGTTGGGGGTCTTAGCCTTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR CAA 90 bp CCAGGCTCAGGAAGAGTCATTCATTGCAAAGGGCCGGCAAGTGAACCAGGGCCAAAAAGCCCCAAGGGTTaGTCTACACTGCTTACCTGC +
Preference number: 5 (lower is better)
Translates to: PGSGRVIHCKGPASEPGPKSPKG*STLLTC
Trigger: GCAGGTAAGCAGTGTAGACAAACCCTTGGGGCTTTT...TGGCCCTGGTTCACTTGCCGGCCCTTTGCAATGAATGACTCTTCCTGAGCCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR CAA 90 bp CAGGATGGGTCTTTTGGAGGTAGATTTGATGCCCACAACGCATGCAAGGCTAAGCCACAAGGGTGCCCTTaGTCTTGCTGGGAAGCTGGC +
Preference number: 5 (lower is better)
Translates to: QDGSFGGRFDAHNACKAKPQGCP*SCWEAG
Trigger: GCCAGCTTCCCAGCAAGACAAAGGGCACCCTTGTGG...CTTAGCCTTGCATGCGTTGTGGGCATCAAATCTACCTCCAAAAGACCCATCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR CAA 90 bp GGAGGTAGATTTGATGCCCACAACGCATGCAAGGCTAAGACCCCCAACTTAGCCAGTTCCACTGACAGCTaGCGTTCCCGAGGTACCAGT +
Preference number: 5 (lower is better)
Translates to: GGRFDAHNACKAKTPNLASSTDS*RSRGTS
Trigger: ACTGGTACCTCGGGAACGCAAGCTGTCAGTGGAACT...GGCTAAGTTGGGGGTCTTAGCCTTGCATGCGTTGTGGGCATCAAATCTACCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR CAA 90 bp AATTCTTGTGGGACAGTTCCACTGACAGCTTGCGTTCCCGAGGTACCAGTCCTCAGTTCCACTGACAGCTaGCGTTCCCGAGGTACCAGT +
Preference number: 5 (lower is better)
Translates to: NSCGTVPLTACVPEVPVLSSTDS*RSRGTS
Trigger: ACTGGTACCTCGGGAACGCAAGCTGTCAGTGGAACT...GAGGACTGGTACCTCGGGAACGCAAGCTGTCAGTGGAACTGTCCCACAAGAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR CAA 90 bp CCAGGCTCAGGAAGAGTCATTCATTGCAAAGGGCCGGCAAGTGAACCAGGGCCAGAGACCTGTGAATTCTaGTGGGACAGTTCCACTGAC +
Preference number: 5 (lower is better)
Translates to: PGSGRVIHCKGPASEPGPETCEF*WDSSTD
Trigger: GTCAGTGGAACTGTCCCACAAGAATTCACAGGTCTC...TGGCCCTGGTTCACTTGCCGGCCCTTTGCAATGAATGACTCTTCCTGAGCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS CCA 90 bp CTCCTTCAAGGGCTCCTTGGCAACATGAAAGCAGCAGAAATCCTCTaGCTCTGCCATTGGAACCGCCAAAGTTCCAACCAGCTGCTTCAG +
Preference number: 5 (lower is better)
Translates to: LLQGLLGNMKAAEIL*LCHWNRQSSNQLLQ
Trigger: CTGAAGCAGCTGGTTGGAACTTTGGCGGTTCCAATGGCAGAGCCAGAGGATTTCTGCTGCTTTCATGTTGCCAAGGAGCCCTTGAAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520489.5
CDS-3UTR CAA 90 bp ACCCCCAACTTAGCCAACGAAGCCCATGGCCTCAGAAGGGCTGCAGCTTGCTCAGGCACAATCTGTTTCTaGGGCTGCCCAATCTTAAAA +
Preference number: 5 (lower is better)
Translates to: TPNLANEAHGLRRAAACSGTICF*GCPILK
Trigger: TTTTAAGATTGGGCAGCCCAAGAAACAGATTGTGCC...TGAGCAAGCTGCAGCCCTTCTGAGGCCATGGGCTTCGTTGGCTAAGTTGGGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR CAA 90 bp AGTTCCAACCAGCTGCTTCAGGAAAATGCCCTGAGGACCTCCACTGTGACTAGACAGAAGGTCCTGGTCTaGCTCACAGAGGGGATTGGA +
Preference number: 5 (lower is better)
Translates to: SSNQLLQENALRTSTVTRQKVLV*LTEGIG
Trigger: TCCAATCCCCTCTGTGAGCAAGACCAGGACCTTCTG...TCTAGTCACAGTGGAGGTCCTCAGGGCATTTTCCTGAAGCAGCTGGTTGGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520292.1
CDS-3UTR CAA 90 bp AGGGCTCCCCAGGATGGGTCTTTTGGAGGTAGATTTGATGCCCACAACGCATGCAAAAGCCCCAAGGGTTaGTCTACACTGCTTACCTGC +
Preference number: 5 (lower is better)
Translates to: RAPQDGSFGGRFDAHNACKSPKG*STLLTC
Trigger: GCAGGTAAGCAGTGTAGACAAACCCTTGGGGCTTTT...GCATGCGTTGTGGGCATCAAATCTACCTCCAAAAGACCCATCCTGGGGAGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR CAA 90 bp CTTAGGTCCCAAAGCCACAAGGGTGCCCTTTGTCTTGCTGGGAAGCTGGCTGAGCTTTTGGAGGTAGATTaGATGCCCACAACGCATGCA +
Preference number: 5 (lower is better)
Translates to: LRSQSHKGALCLAGKLAELLEVD*MPTTHA
Trigger: TGCATGCGTTGTGGGCATCAAATCTACCTCCAAAAG...CTCAGCCAGCTTCCCAGCAAGACAAAGGGCACCCTTGTGGCTTTGGGACCTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR CAA 90 bp CACTTAGGTCCCAAAGCCACAAGGGTGCCCTTTGTCTTGCTGGGAAGCTGGCTGCTTTTGGAGGTAGATTaGATGCCCACAACGCATGCA +
Preference number: 5 (lower is better)
Translates to: HLGPKATRVPFVLLGSWLLLEVD*MPTTHA
Trigger: TGCATGCGTTGTGGGCATCAAATCTACCTCCAAAAG...CAGCCAGCTTCCCAGCAAGACAAAGGGCACCCTTGTGGCTTTGGGACCTAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR CAA 90 bp TTCTTGTGGGACAGTTCCACTGACAGCTTGCGTTCCCGAGGTACCAGTCCTCAGGAGACCTGTGAATTCTaGTGGGACAGTTCCACTGAC +
Preference number: 5 (lower is better)
Translates to: FLWDSSTDSLRSRGTSPQETCEF*WDSSTD
Trigger: GTCAGTGGAACTGTCCCACAAGAATTCACAGGTCTC...CTGAGGACTGGTACCTCGGGAACGCAAGCTGTCAGTGGAACTGTCCCACAAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR CAA 90 bp CTGGTGCCAGGCTCAGGAAGAGTCATTCATTGCAAAGGGCCGGCAAGTGAACCAGAGACCTGTGAATTCTaGTGGGACAGTTCCACTGAC +
Preference number: 5 (lower is better)
Translates to: LVPGSGRVIHCKGPASEPETCEF*WDSSTD
Trigger: GTCAGTGGAACTGTCCCACAAGAATTCACAGGTCTC...TGGTTCACTTGCCGGCCCTTTGCAATGAATGACTCTTCCTGAGCCTGGCACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR CAA 90 bp TGCAAGGCTAAGACCCCCAACTTAGCCAACGAAGCCCATGGCCTCAGAAGGGCTCCCACTGTTCCTGCTTaGAGACCTGTGAATTCTTGT +
Preference number: 5 (lower is better)
Translates to: CKAKTPNLANEAHGLRRAPTVPA*RPVNSC
Trigger: ACAAGAATTCACAGGTCTCAAAGCAGGAACAGTGGG...AGCCCTTCTGAGGCCATGGGCTTCGTTGGCTAAGTTGGGGGTCTTAGCCTTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR CAA 90 bp TGTGGGACAGTTCCACTGACAGCTTGCGTTCCCGAGGTACCAGTCCTCAGTGACCCCACTGTTCCTGCTTaGAGACCTGTGAATTCTTGT +
Preference number: 5 (lower is better)
Translates to: CGTVPLTACVPEVPVLSDPTVPA*RPVNSC
Trigger: ACAAGAATTCACAGGTCTCAAAGCAGGAACAGTGGG...GTCACTGAGGACTGGTACCTCGGGAACGCAAGCTGTCAGTGGAACTGTCCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS CCA 90 bp CTCCTTGGCAACATGAAAGCAGCAGAAATCCTCTGGCTCTGCCATTaGAACCGCCAAAGTTCCAACCAGCTGCTTCAGGAAAATGCCCTG +
Preference number: 5 (lower is better)
Translates to: LLGNMKAAEILWLCH*NRQSSNQLLQENAL
Trigger: CAGGGCATTTTCCTGAAGCAGCTGGTTGGAACTTTGGCGGTTCCAATGGCAGAGCCAGAGGATTTCTGCTGCTTTCATGTTGCCAAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520489.5
CDS-3UTR CAA 90 bp CGGGAACCCCAACCACTTAGGTCCCAAAGCCACAAGGGTGCCCTTTGTCTTGCTGGCACAATCTGTTTCTaGGGCTGCCCAATCTTAAAA +
Preference number: 5 (lower is better)
Translates to: REPQPLRSQSHKGALCLAGTICF*GCPILK
Trigger: TTTTAAGATTGGGCAGCCCAAGAAACAGATTGTGCC...AGCAAGACAAAGGGCACCCTTGTGGCTTTGGGACCTAAGTGGTTGGGGTTCCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR CAA 90 bp TCAGAAGGTCCTGGTCTTGCTCACAGAGGGGATTGGAGAGTAAGTCCAAGGATACAGAAGGTCCTGGTCTaGCTCACAGAGGGGATTGGA +
Preference number: 5 (lower is better)
Translates to: SEGPGLAHRGDWRVSPRIQKVLV*LTEGIG
Trigger: TCCAATCCCCTCTGTGAGCAAGACCAGGACCTTCTG...TATCCTTGGACTTACTCTCCAATCCCCTCTGTGAGCAAGACCAGGACCTTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522687.5
CDS-3UTR CAA 90 bp CTGGTGCCAGGCTCAGGAAGAGTCATTCATTGCAAAGGGCCGGCAAGTGAACCACTTTTGGAGGTAGATTaGATGCCCACAACGCATGCA +
Preference number: 5 (lower is better)
Translates to: LVPGSGRVIHCKGPASEPLLEVD*MPTTHA
Trigger: TGCATGCGTTGTGGGCATCAAATCTACCTCCAAAAG...TGGTTCACTTGCCGGCCCTTTGCAATGAATGACTCTTCCTGAGCCTGGCACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR CAA 90 bp GAAGGTCCTGGTCTTGCTCACAGAGGGGATTGGAGAGTAAGTCCAAGGATATCTTCTTCACGGCAGATTTaGACATGGCCGGGCATGGTG +
Preference number: 5 (lower is better)
Translates to: EGPGLAHRGDWRVSPRISSSRQI*TWPGMV
Trigger: CACCATGCCCGGCCATGTCAAAATCTGCCGTGAAGA...AGATATCCTTGGACTTACTCTCCAATCCCCTCTGTGAGCAAGACCAGGACCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522687.5
CDS GCA 90 bp AGGTTCCAGGAGCTCAGCTACCACACAGAGCAGGACTCCCAGATGTaGCTCTCAAAGGACATGACCAGGAATTTGGTTTTGAGACAGAGT +
Preference number: 5 (lower is better)
Translates to: RFQELSYHTEQDSQM*LSKDMTRNLVLRQS
Trigger: ACTCTGTCTCAAAACCAAATTCCTGGTCATGTCCTTTGAGAGGCACATCTGGGAGTCCTGCTCTGTGTGGTAGCTGAGCTCCTGGAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520489.5
CDS GCA 90 bp CAAGGGCTCCTTGGCAACATGAAAGCAGCAGAAATCCTCTGGCTCTaGCATTGGAACCGCCAAAGTTCCAACCAGCTGCTTCAGGAAAAT +
Preference number: 5 (lower is better)
Translates to: QGLLGNMKAAEILWL*HWNRQSSNQLLQEN
Trigger: ATTTTCCTGAAGCAGCTGGTTGGAACTTTGGCGGTTCCAATGGCAGAGCCAGAGGATTTCTGCTGCTTTCATGTTGCCAAGGAGCCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520489.5
CDS GCA 90 bp GTGACGGCGGCTCCCAGGGAAGGAACGCTTTCCTTTTGTGATCAGTaGTTTGTAGGAAAGGTGTGTTTACACATCAGTAACTGGCTGAGG +
Preference number: 5 (lower is better)
Translates to: VTAAPREGTLSFCDQ*FVGKVCLHISNWLR
Trigger: CCTCAGCCAGTTACTGATGTGTAAACACACCTTTCCTACAAAGCACTGATCACAAAAGGAAAGCGTTCCTTCCCTGGGAGCCGCCGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522687.5
CDS-3UTR CAA 90 bp GAGGTTCTAGATCCGCATAAGCAGGAAGAAGGCCCAGGTTGCTGTCTTCCCAGCGGCACAATCTGTTTCTaGGGCTGCCCAATCTTAAAA +
Preference number: 5 (lower is better)
Translates to: EVLDPHKQEEGPGCCLPSGTICF*GCPILK
Trigger: TTTTAAGATTGGGCAGCCCAAGAAACAGATTGTGCC...GCTGGGAAGACAGCAACCTGGGCCTTCTTCCTGCTTATGCGGATCTAGAACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522268.1
CDS-3UTR CAA 90 bp GGAAGGGGTTTCCTCTGCTCGCCTAAGTTACAGCACAATACTATGTGGACGTTTCTCTTCACAGCCATGTaGAGGCTCGGGAAGACACTG +
Preference number: 5 (lower is better)
Translates to: GRGFLCSPKLQHNTMWTFLFTAM*RLGKTL
Trigger: CAGTGTCTTCCCGAGCCTCAACATGGCTGTGAAGAG...AAACGTCCACATAGTATTGTGCTGTAACTTAGGCGAGCAGAGGAAACCCCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276416.11
CDS-3UTR CAA 90 bp AATTCTTGTGGGACAGTTCCACTGACAGCTTGCGTTCCCGAGGTACCAGTCCTCCCCACTGTTCCTGCTTaGAGACCTGTGAATTCTTGT +
Preference number: 5 (lower is better)
Translates to: NSCGTVPLTACVPEVPVLPTVPA*RPVNSC
Trigger: ACAAGAATTCACAGGTCTCAAAGCAGGAACAGTGGG...GAGGACTGGTACCTCGGGAACGCAAGCTGTCAGTGGAACTGTCCCACAAGAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519513.5
CDS-3UTR CAA 90 bp GGTCCTGGTCTTGCTCACAGAGGGGATTGGAGAGTAAGTCCAAGGATATCTTCATGCTCACAGAGGGGATaGGAGAGTAAGTCCAAGGAT +
Preference number: 5 (lower is better)
Translates to: GPGLAHRGDWRVSPRISSCSQRG*ESKSKD
Trigger: ATCCTTGGACTTACTCTCCAATCCCCTCTGTGAGCA...TGAAGATATCCTTGGACTTACTCTCCAATCCCCTCTGTGAGCAAGACCAGGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522687.5
CDS-3UTR CAA 90 bp GATACTCAGGTGAGACACAAACCCACTGTTCCTGCTTTGAGACCTGTGAATTCTCTCTTCACAGCCATGTaGAGGCTCGGGAAGACACTG +
Preference number: 5 (lower is better)
Translates to: DTQVRHKPTVPALRPVNSLFTAM*RLGKTL
Trigger: CAGTGTCTTCCCGAGCCTCAACATGGCTGTGAAGAG...AGAATTCACAGGTCTCAAAGCAGGAACAGTGGGTTTGTGTCTCACCTGAGTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276416.11
ENST00000519513.5
CDS-3UTR CAA 90 bp TGCTCACAGAGGGGATTGGAGAGTAAGTCCAAGGATATCTTCACGGCAGATTTTCTCTTCACAGCCATGTaGAGGCTCGGGAAGACACTG +
Preference number: 5 (lower is better)
Translates to: CSQRGLESKSKDIFTADFLFTAM*RLGKTL
Trigger: CAGTGTCTTCCCGAGCCTCAACATGGCTGTGAAGAG...AAAATCTGCCGTGAAGATATCCTTGGACTTACTCTCCAATCCCCTCTGTGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522687.5
CDS-3UTR CAA 90 bp GAGGTTCTAGATCCGCATAAGCAGGAAGAAGGCCCAGGTTGCTGTCTTCCCAGCGAGTTACTCACTGTTTaGGGCACAATCTGTTTCTTG +
Preference number: 5 (lower is better)
Translates to: EVLDPHKQEEGPGCCLPSELLTV*GTICFL
Trigger: CAAGAAACAGATTGTGCCCAAAACAGTGAGTAACTC...GCTGGGAAGACAGCAACCTGGGCCTTCTTCCTGCTTATGCGGATCTAGAACCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522268.1
CDS-3UTR CAA 90 bp GGTCCTGGTCTTGCTCACAGAGGGGATTGGAGAGTAAGTCCAAGGATATCTTCATCTCTCTCCACTGTTTaGGGCACAATCTGTTTCTTG +
Preference number: 5 (lower is better)
Translates to: GPGLAHRGDWRVSPRISSSLSTV*GTICFL
Trigger: CAAGAAACAGATTGTGCCCAAAACAGTGGAGAGAGA...TGAAGATATCCTTGGACTTACTCTCCAATCCCCTCTGTGAGCAAGACCAGGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522687.5
CDS TCA 90 bp TTGAAGTCATCTGGCCAACACCTCACTTTTAAAAAGGAGGGAAACTaGGGACAGAGAGAGATGACCTATGACTCATCCAAAGTCACGATG +
Preference number: 5 (lower is better)
Translates to: LKSSGQHLTFKKEGN*GQREMTYDSSKVTM
Trigger: CATCGTGACTTTGGATGAGTCATAGGTCATCTCTCTCTGTCCTCAGTTTCCCTCCTTTTTAAAAGTGAGGTGTTGGCCAGATGACTTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520489.5
CDS GCA 72 bp GGGACTCAAAGCTGGGCTGGAAGTAGTCGAGGCGGCTaGCGTAGAAGCGCGGCATCTCCTCCAGCAGCTGCC +
Preference number: 6 (lower is better)
Translates to: GTQSWAGSSRGG*RRSAASPPAAA
Trigger: GGCAGCTGCTGGAGGAGATGCCGCGCTTCTACGGCAGCCGCCTCGACTACTTCCAGCCCAGCTTTGAGTCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519335.5
ENST00000519513.5
ENST00000519863.5
ENST00000520489.5
CDS GCA 72 bp TGCTGCCTGGTTAAAGGGCATCCCTGGCCTCCCATCTaGTCCAACCTGGACACGCGGGAGCCTGGCACCCTG +
Preference number: 6 (lower is better)
Translates to: CCLVKGHPWPPI*SNLDTREPGTL
Trigger: CAGGGTGCCAGGCTCCCGCGTGTCCAGGTTGGAGCAGATGGGAGGCCAGGGATGCCCTTTAACCAGGCAGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519863.5
CDS GCA 72 bp ACTTGCCGGGCAGAAGCCATGGGCCTCCCAGGACTGTaGACAGAGAACGCGGGCCCCTCAGCACTACGGAAC +
Preference number: 6 (lower is better)
Translates to: TCRAEAMGLPGL*TENAGPSALRN
Trigger: GTTCCGTAGTGCTGAGGGGCCCGCGTTCTCTGTGCACAGTCCTGGGAGGCCCATGGCTTCTGCCCGGCAAGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520489.5
CDS CCA 72 bp TGGTGGCAGGGGTACCCTGAGCTCGCCTGGGCCATGTaGGTACTCTGGAGCCCCCAGGAGCATGGACGCTTA +
Preference number: 6 (lower is better)
Translates to: WWQGYPELAWAM*VLWSPQEHGRL
Trigger: TAAGCGTCCATGCTCCTGGGGGCTCCAGAGTACCCACATGGCCCAGGCGAGCTCAGGGTACCCCTGCCACCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521140.1
CDS CCA 72 bp CTGGGCCATGTGGGTACTCTGGAGCCCCCAGGAGCATaGACGCTTAGGCCACAGGTCACAGAGCTGACGTCC +
Preference number: 6 (lower is better)
Translates to: LGHVGTLEPPGA*TLRPQVTELTS
Trigger: GGACGTCAGCTCTGTGACCTGTGGCCTAAGCGTCCATGCTCCTGGGGGCTCCAGAGTACCCACATGGCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521140.1
CDS CAA 90 bp ATTCAGTCATCGGCCACAATGGAGAGGGCCCGGAGCTCACTGAGTTaGGCCTCGTTCTCCCGCTCCCGCTGCTCATCGGAGTGGCCTGGC +
Preference number: 6 (lower is better)
Translates to: IQSSATMERARSSLS*ASFSRSRCSSEWPG
Trigger: GCCAGGCCACTCCGATGAGCAGCGGGAGCGGGAGAACGAGGCCAAACTCAGTGAGCTCCGGGCCCTCTCCATTGTGGCCGATGACTGAAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519335.5
ENST00000519513.5
ENST00000520489.5
CDS CCA 72 bp AGAAGCGCGGCATCTCCTCCAGCAGCTGCCTGTTCTTaGCTTCAAAGTCCTCCCGCACAGGCCGCAGCTCCT +
Preference number: 6 (lower is better)
Translates to: RSAASPPAAACS*LQSPPAQAAAP
Trigger: AGGAGCTGCGGCCTGTGCGGGAGGACTTTGAAGCCAAGAACAGGCAGCTGCTGGAGGAGATGCCGCGCTTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519335.5
ENST00000519513.5
ENST00000519863.5
ENST00000520489.5
CDS GCA 72 bp TACGGAACTGAGGGTGGGAAGCAGACACCACCAGGATaGATAGTCGCCCATGGCGTGGGCTGGGGTGAGACT +
Preference number: 6 (lower is better)
Translates to: YGTEGGKQTPPG*IVAHGVGWGET
Trigger: AGTCTCACCCCAGCCCACGCCATGGGCGACTATGCATCCTGGTGGTGTCTGCTTCCCACCCTCAGTTCCGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520489.5
CDS CCA 72 bp CTCGTTCTCCCGCTCCCGCTGCTCATCGGAGTGGCCTaGCTGGTCAAGCTGATGGGACAGGTCTCCAAAGAT +
Preference number: 6 (lower is better)
Translates to: LVLPLPLLIGVA*LVKLMGQVSKD
Trigger: ATCTTTGGAGACCTGTCCCATCAGCTTGACCAGCCAGGCCACTCCGATGAGCAGCGGGAGCGGGAGAACGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276416.11
ENST00000399977.8
ENST00000519335.5
ENST00000519513.5
ENST00000520489.5
CDS CCA 72 bp CCCAAGAGGCAGTCAACAGCCCCCAGCAATGCTGCCTaGTTAAAGGGCATCCCTGGCCTCCCATCTGCTCCA +
Preference number: 6 (lower is better)
Translates to: PKRQSTAPSNAA*LKGIPGLPSAP
Trigger: TGGAGCAGATGGGAGGCCAGGGATGCCCTTTAACCAGGCAGCATTGCTGGGGGCTGTTGACTGCCTCTTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519863.5
CDS CCA 72 bp GATCAGGCTGCGCAGCCCAGGGAGCTCATGACTCTGTaGCCATTCGGAGGTGACCCAGGACCAGAAGAGTTG +
Preference number: 6 (lower is better)
Translates to: DQAAQPRELMTL*PFGGDPGPEEL
Trigger: CAACTCTTCTGGTCCTGGGTCACCTCCGAATGGCCACAGAGTCATGAGCTCCCTGGGCTGCGCAGCCTGATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000520292.1
ENST00000520489.5
ENST00000640731.1
CDS TCA 72 bp TGCACAGAGAACGCGGGCCCCTCAGCACTACGGAACTaGGGGTGGGAAGCAGACACCACCAGGATGCATAGT +
Preference number: 6 (lower is better)
Translates to: CTENAGPSALRN*GWEADTTRMHS
Trigger: ACTATGCATCCTGGTGGTGTCTGCTTCCCACCCTCAGTTCCGTAGTGCTGAGGGGCCCGCGTTCTCTGTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520489.5
CDS TCA 72 bp GCCCAGGGAGCTCATGACTCTGTGGCCATTCGGAGGTaGCCCAGGACCAGAAGAGTTGGTTCCTCCTGGACA +
Preference number: 6 (lower is better)
Translates to: AQGAHDSVAIRR*PRTRRVGSSWT
Trigger: TGTCCAGGAGGAACCAACTCTTCTGGTCCTGGGTCACCTCCGAATGGCCACAGAGTCATGAGCTCCCTGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520489.5
CDS TCA 72 bp TCCAGCCCTCACAGTGCCACTGGCAGGTGGCAGAACTaGAATCTAAACTCACCCCTGCCCCAGGGCACCTTC +
Preference number: 6 (lower is better)
Translates to: SSPHSATGRWQN*NLNSPLPQGTF
Trigger: GAAGGTGCCCTGGGGCAGGGGTGAGTTTAGATTTCAGTTCTGCCACCTGCCAGTGGCACTGTGAGGGCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520489.5
CDS TCA 72 bp ACCCGTGCCCTTAGACATAGTAATCAAACCAGCATCTaGCCGACTTGCCGGGCAGAAGCCATGGGCCTCCCA +
Preference number: 6 (lower is better)
Translates to: TRALRHSNQTSI*PTCRAEAMGLP
Trigger: TGGGAGGCCCATGGCTTCTGCCCGGCAAGTCGGTCAGATGCTGGTTTGATTACTATGTCTAAGGGCACGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520489.5
CDS GCA 72 bp TCACGGCAGATTTTGACATGGCCAGGTCTGCGTCGGTaGTCTTCTTCATGTCTTTCTGCAGCCTCCGGGTCT +
Preference number: 6 (lower is better)
Translates to: SRQILTWPGLRR*SSSCLSAASGS
Trigger: AGACCCGGAGGCTGCAGAAAGACATGAAGAAGAGCACCGACGCAGACCTGGCCATGTCAAAATCTGCCGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276416.11
ENST00000519335.5
ENST00000519863.5
ENST00000520292.1
ENST00000521140.1
ENST00000640731.1
CDS CCA 72 bp GACTGGGATCATAGGCACTCAGAGTTGAGAGGATGCTaGCAGACTCACTGTCAGGTTCCAGGAGCTCAGCTA +
Preference number: 6 (lower is better)
Translates to: DWDHRHSELRGC*QTHCQVPGAQL
Trigger: TAGCTGAGCTCCTGGAACCTGACAGTGAGTCTGCCAGCATCCTCTCAACTCTGAGTGCCTATGATCCCAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520489.5
CDS CCA 72 bp GGGCTCCTTGGCAACATGAAAGCAGCAGAAATCCTCTaGCTCTGCCATTGGAACCGCCAAAGTTCCAACCAG +
Preference number: 6 (lower is better)
Translates to: GLLGNMKAAEIL*LCHWNRQSSNQ
Trigger: CTGGTTGGAACTTTGGCGGTTCCAATGGCAGAGCCAGAGGATTTCTGCTGCTTTCATGTTGCCAAGGAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520489.5
CDS CCA 72 bp CCTGTGAGCTTTATCACACAACGGACTAGGGGATGGTaGGGAAGGTGCCTTGAAGTCATCTGGCCAACACCT +
Preference number: 6 (lower is better)
Translates to: PVSFITQRTRGW*GRCLEVIWPTP
Trigger: AGGTGTTGGCCAGATGACTTCAAGGCACCTTCCCCACCATCCCCTAGTCCGTTGTGTGATAAAGCTCACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520489.5
CDS CCA 72 bp CCTCCTGTGAGCTTTATCACACAACGGACTAGGGGATaGTGGGGAAGGTGCCTTGAAGTCATCTGGCCAACA +
Preference number: 6 (lower is better)
Translates to: PPVSFITQRTRG*WGRCLEVIWPT
Trigger: TGTTGGCCAGATGACTTCAAGGCACCTTCCCCACCATCCCCTAGTCCGTTGTGTGATAAAGCTCACAGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520489.5
CDS CCA 72 bp TGTGGCCATTCGGAGGTGACCCAGGACCAGAAGAGTTaGTTCCTCCTGGACATTTTTATGAGGAACCCAGAG +
Preference number: 6 (lower is better)
Translates to: CGHSEVTQDQKS*FLLDIFMRNPE
Trigger: CTCTGGGTTCCTCATAAAAATGTCCAGGAGGAACCAACTCTTCTGGTCCTGGGTCACCTCCGAATGGCCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520489.5
CDS CAA 72 bp CTGTGGCCATTCGGAGGTGACCCAGGACCAGAAGAGTaGGTTCCTCCTGGACATTTTTATGAGGAACCCAGA +
Preference number: 6 (lower is better)
Translates to: LWPFGGDPGPEE*VPPGHFYEEPR
Trigger: TCTGGGTTCCTCATAAAAATGTCCAGGAGGAACCAACTCTTCTGGTCCTGGGTCACCTCCGAATGGCCACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520489.5
CDS CAA 90 bp CTCATGACTCTGTGGCCATTCGGAGGTGACCCAGGACCAGAAGAGTaGGTTCCTCCTGGACATTTTTATGAGGAACCCAGAGAGGAGGAA +
Preference number: 6 (lower is better)
Translates to: LMTLWPFGGDPGPEE*VPPGHFYEEPREEE
Trigger: TTCCTCCTCTCTGGGTTCCTCATAAAAATGTCCAGGAGGAACCAACTCTTCTGGTCCTGGGTCACCTCCGAATGGCCACAGAGTCATGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520489.5
CDS CAA 90 bp GCTCCTTGGCAACATGAAAGCAGCAGAAATCCTCTGGCTCTGCCATaGGAACCGCCAAAGTTCCAACCAGCTGCTTCAGGAAAATGCCCT +
Preference number: 6 (lower is better)
Translates to: APWQHESSRNPLALP*EPPKFQPAASGKCP
Trigger: AGGGCATTTTCCTGAAGCAGCTGGTTGGAACTTTGGCGGTTCCAATGGCAGAGCCAGAGGATTTCTGCTGCTTTCATGTTGCCAAGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520489.5
CDS GCA 72 bp GGTGCTAAGTGGGTGAAGCCACCAAAGCACCCTGAATaGTCACCCGTGCCCTTAGACATAGTAATCAAACCA +
Preference number: 6 (lower is better)
Translates to: GAKWVKPPKHPE*SPVPLDIVIKP
Trigger: TGGTTTGATTACTATGTCTAAGGGCACGGGTGAGCATTCAGGGTGCTTTGGTGGCTTCACCCACTTAGCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520489.5
CDS GCA 72 bp GAGCTCAGCTACCACACAGAGCAGGACTCCCAGATGTaGCTCTCAAAGGACATGACCAGGAATTTGGTTTTG +
Preference number: 6 (lower is better)
Translates to: ELSYHTEQDSQM*LSKDMTRNLVL
Trigger: CAAAACCAAATTCCTGGTCATGTCCTTTGAGAGGCACATCTGGGAGTCCTGCTCTGTGTGGTAGCTGAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520489.5
CDS GCA 72 bp CTTGGCAACATGAAAGCAGCAGAAATCCTCTGGCTCTaGCATTGGAACCGCCAAAGTTCCAACCAGCTGCTT +
Preference number: 6 (lower is better)
Translates to: LGNMKAAEILWL*HWNRQSSNQLL
Trigger: AAGCAGCTGGTTGGAACTTTGGCGGTTCCAATGGCAGAGCCAGAGGATTTCTGCTGCTTTCATGTTGCCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520489.5
CDS CAA 72 bp CAACATGAAAGCAGCAGAAATCCTCTGGCTCTGCCATaGGAACCGCCAAAGTTCCAACCAGCTGCTTCAGGA +
Preference number: 6 (lower is better)
Translates to: QHESSRNPLALP*EPPKFQPAASG
Trigger: TCCTGAAGCAGCTGGTTGGAACTTTGGCGGTTCCAATGGCAGAGCCAGAGGATTTCTGCTGCTTTCATGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520489.5
CDS TCA 72 bp ACTGAAGTGCCACTACACCCAAAGGCTATGAGTGAATaGCTCTCACATGGCCATTGCCAGGGAACAGTTCCA +
Preference number: 6 (lower is better)
Translates to: TEVPLHPKAMSE*LSHGHCQGTVP
Trigger: TGGAACTGTTCCCTGGCAATGGCCATGTGAGAGTCATTCACTCATAGCCTTTGGGTGTAGTGGCACTTCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518366.1
CDS GCA 72 bp CTCTCCACTGTTTTGGGCACAATCTGTTTCTTGGGCTaGCCAATCTTAAAAGGAATCCAGCTCATGGTCCCG +
Preference number: 6 (lower is better)
Translates to: LSTVLGTICFLG*PILKGIQLMVP
Trigger: CGGGACCATGAGCTGGATTCCTTTTAAGATTGGGCAGCCCAAGAAACAGATTGTGCCCAAAACAGTGGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276416.11
ENST00000518366.1
ENST00000520292.1
ENST00000522687.5
CDS CCA 72 bp AACATGAAAGCAGCAGAAATCCTCTGGCTCTGCCATTaGAACCGCCAAAGTTCCAACCAGCTGCTTCAGGAA +
Preference number: 6 (lower is better)
Translates to: NMKAAEILWLCH*NRQSSNQLLQE
Trigger: TTCCTGAAGCAGCTGGTTGGAACTTTGGCGGTTCCAATGGCAGAGCCAGAGGATTTCTGCTGCTTTCATGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520489.5
CDS CAA 90 bp TCCCTTTCAAAGTCTCTCTCCACTGTTTTGGGCACAATCTGTTTCTaGGGCTGCCCAATCTTAAAAGGAATCCAGCTCATGGTCCCGAAC +
Preference number: 6 (lower is better)
Translates to: SLSKSLSTVLGTICF*GCPILKGIQLMVPN
Trigger: GTTCGGGACCATGAGCTGGATTCCTTTTAAGATTGGGCAGCCCAAGAAACAGATTGTGCCCAAAACAGTGGAGAGAGACTTTGAAAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276416.11
ENST00000518366.1
ENST00000520292.1
ENST00000522687.5
CDS GCA 72 bp TTACTCACTGTTTTGGGCACAATCTGTTTCTTGGGCTaGCCAATCTTAAAAGGAATCCAGCTCATGGTCCCG +
Preference number: 6 (lower is better)
Translates to: LLTVLGTICFLG*PILKGIQLMVP
Trigger: CGGGACCATGAGCTGGATTCCTTTTAAGATTGGGCAGCCCAAGAAACAGATTGTGCCCAAAACAGTGAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522268.1
CDS GCA 72 bp GCTCCCAGGGAAGGAACGCTTTCCTTTTGTGATCAGTaGTTTGTAGGAAAGGTGTGTTTACACATCAGTAAC +
Preference number: 6 (lower is better)
Translates to: APREGTLSFCDQ*FVGKVCLHISN
Trigger: GTTACTGATGTGTAAACACACCTTTCCTACAAAGCACTGATCACAAAAGGAAAGCGTTCCTTCCCTGGGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522687.5
CDS CAA 72 bp GAATCTCACAGCAAAACAATCGAGTTACTCACTGTTTaGGGCACAATCTGTTTCTTGGGCTGCCCAATCTTA +
Preference number: 6 (lower is better)
Translates to: ESHSKTIELLTV*GTICFLGCPIL
Trigger: TAAGATTGGGCAGCCCAAGAAACAGATTGTGCCCAAAACAGTGAGTAACTCGATTGTTTTGCTGTGAGATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522268.1
CDS CAA 90 bp TACAGAACTGAATCTCACAGCAAAACAATCGAGTTACTCACTGTTTaGGGCACAATCTGTTTCTTGGGCTGCCCAATCTTAAAAGGAATC +
Preference number: 6 (lower is better)
Translates to: YRTESHSKTIELLTV*GTICFLGCPILKGI
Trigger: GATTCCTTTTAAGATTGGGCAGCCCAAGAAACAGATTGTGCCCAAAACAGTGAGTAACTCGATTGTTTTGCTGTGAGATTCAGTTCTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522268.1