RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BHLHE41 (Homo sapiens)

Ensembl gene IDs: ENSG00000123095

Ensembl transcript IDs: ENST00000242728.5, ENST00000394326.2, ENST00000541271.1

Found 134 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTCAATCTGTTTGTGGAACGCCTCCTAAAACAGGCAGGGCAGCTTTaGGAACTAGCTCTACATAACAACTACCTGCTGTTCCATGTCAAC +
Preference number: 1 (lower is better)
Translates to: LNLFVERLLKQAGQL*ELALHNNYLLFHVN
Trigger: GTTGACATGGAACAGCAGGTAGTTGTTATGTAGAGCTAGTTCTCAAAGCTGCCCTGCCTGTTTTAGGAGGCGTTCCACAAACAGATTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242728.5
3UTR GCA 90 bp GATAGGAAGGCCTCACAGGACTTCATTCTATATCTTTACAGCATTTaGAATCAAAACTGGCCAGTTAAATGCTTTCGTTCACTTTTGAAT +
Preference number: 1 (lower is better)
Translates to: DRKASQDFILYLYSI*NQNWPVKCFRSLLN
Trigger: ATTCAAAAGTGAACGAAAGCATTTAACTGGCCAGTTTTGATTGCAAATGCTGTAAAGATATAGAATGAAGTCCTGTGAGGCCTTCCTATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242728.5
3UTR-3UTR CCA 90 bp GGTATCTGGTTTGGTCTCCAGAAAATACATAGACTTGGAGATAGGAAGGCCTCAAGGGATGTTAGTGTGTaGAGGGTGGGGTGGTGCGGG +
Preference number: 2 (lower is better)
Translates to: GIWFGLQKIHRLGDRKASRDVSV*RVGWCG
Trigger: CCCGCACCACCCCACCCTCCACACACTAACATCCCT...TGAGGCCTTCCTATCTCCAAGTCTATGTATTTTCTGGAGACCAAACCAGATACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242728.5
3UTR-3UTR TCA 90 bp TCTGGTTTGGTCTCCAGAAAATACATAGACTTGGAGATAGGAAGGCCTCACAGGATCCATCTCCTTCCCTaGCTTAGTTCTGACGATGGC +
Preference number: 2 (lower is better)
Translates to: SGLVSRKYIDLEIGRPHRIHLLP*LSSDDG
Trigger: GCCATCGTCAGAACTAAGTCAGGGAAGGAGATGGAT...CCTGTGAGGCCTTCCTATCTCCAAGTCTATGTATTTTCTGGAGACCAAACCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242728.5
3UTR-3UTR CCA 90 bp ATTAAGATACATTGGGAACGAGCAGGTAGACAAAGCCAGAGCCTGGAGGCTTGCATCTTTTACAGCTGGTaGGGGGAAGAAAGGGATGTT +
Preference number: 2 (lower is better)
Translates to: IKIHWERAGRQSQSLEACIFYSW*GEERDV
Trigger: AACATCCCTTTCTTCCCCCCACCAGCTGTAAAAGAT...GCAAGCCTCCAGGCTCTGGCTTTGTCTACCTGCTCGTTCCCAATGTATCTTAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242728.5
3UTR-3UTR GCA 90 bp ATTAAGATACATTGGGAACGAGCAGGTAGACAAAGCCAGAGCCTGGAGGCTTGCAACAGCAGCAGCAAATaGACCAAACTGACGAAAAGA +
Preference number: 2 (lower is better)
Translates to: IKIHWERAGRQSQSLEACNSSSK*TKLTKR
Trigger: TCTTTTCGTCAGTTTGGTGCATTTGCTGCTGCTGTT...GCAAGCCTCCAGGCTCTGGCTTTGTCTACCTGCTCGTTCCCAATGTATCTTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242728.5
3UTR-3UTR TCA 90 bp AGAGTGGGAATAGATGCACTTGAGATGTGTATGTATAGATACCTATCTATGGATACTTCTCACTCTGCTTaGACCTCCGTCCTTCGGGAC +
Preference number: 2 (lower is better)
Translates to: RVGIDALEMCMYRYLSMDTSHSA*TSVLRD
Trigger: GTCCCGAAGGACGGAGGTTCAAGCAGAGTGAGAAGT...ATCCATAGATAGGTATCTATACATACACATCTCAAGTGCATCTATTCCCACTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242728.5
3UTR-3UTR CCA 90 bp ATTAAGATACATTGGGAACGAGCAGGTAGACAAAGCCAGAGCCTGGAGGCTTGCCTCACAGTGCTACCTTaGCAACAAACTAAAAATATC +
Preference number: 2 (lower is better)
Translates to: IKIHWERAGRQSQSLEACLTVLP*QQTKNI
Trigger: GATATTTTTAGTTTGTTGCCAAGGTAGCACTGTGAG...GCAAGCCTCCAGGCTCTGGCTTTGTCTACCTGCTCGTTCCCAATGTATCTTAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242728.5
3UTR-3UTR TCA 90 bp GGTATCTGGTTTGGTCTCCAGAAAATACATAGACTTGGAGATAGGAAGGCCTCAACTTCTCACTCTGCTTaGACCTCCTTAAGGGTATTT +
Preference number: 2 (lower is better)
Translates to: GIWFGLQKIHRLGDRKASTSHSA*TSLRVF
Trigger: AAATACCCTTAAGGAGGTTCAAGCAGAGTGAGAAGT...TGAGGCCTTCCTATCTCCAAGTCTATGTATTTTCTGGAGACCAAACCAGATACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242728.5
3UTR-3UTR GCA 90 bp TTGCACTTTTCATTAAGATACATTGGGAACGAGCAGGTAGACAAAGCCAGAGCCTGTTTATGCCTGTCGTaGATCTATTACACTTCCTCC +
Preference number: 2 (lower is better)
Translates to: LHFSLRYIGNEQVDKARACLCLS*IYYTSS
Trigger: GGAGGAAGTGTAATAGATGCACGACAGGCATAAACA...GGCTCTGGCTTTGTCTACCTGCTCGTTCCCAATGTATCTTAATGAAAAGTGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242728.5
3UTR-3UTR GCA 90 bp GGTATCTGGTTTGGTCTCCAGAAAATACATAGACTTGGAGATAGGAAGGCCTCATACATAACAACTACCTaGTGTTCCATGTCAACTCCA +
Preference number: 2 (lower is better)
Translates to: GIWFGLQKIHRLGDRKASYITTT*CSMSTP
Trigger: TGGAGTTGACATGGAACAGCAGGTAGTTGTTATGTA...TGAGGCCTTCCTATCTCCAAGTCTATGTATTTTCTGGAGACCAAACCAGATACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242728.5
3UTR-3UTR GCA 90 bp GTATCTGGTTTGGTCTCCAGAAAATACATAGACTTGGAGATAGGAAGGCCTCACTGCAACGTGAGAAACTaGATCCTCACTTCTTTGAAA +
Preference number: 2 (lower is better)
Translates to: VSGLVSRKYIDLEIGRPHCNVRN*ILTSLK
Trigger: TTTCAAAGAAGTGAGGATGCAGTTTCTCACGTTGCA...GTGAGGCCTTCCTATCTCCAAGTCTATGTATTTTCTGGAGACCAAACCAGATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242728.5
3UTR CAA 90 bp ATGAGCAAAACAGGAACTCCGAATGTACACATAACACCTGTTTTGTaGTTCTTGTTTATGCCTGTCGTGCATCTATTACACTTCCTCCCT +
Preference number: 2 (lower is better)
Translates to: MSKTGTPNVHITPVL*FLFMPVVHLLHFLP
Trigger: AGGGAGGAAGTGTAATAGATGCACGACAGGCATAAACAAGAACAACAAAACAGGTGTTATGTGTACATTCGGAGTTCCTGTTTTGCTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242728.5
3UTR CAA 90 bp TGTGATTATCTGGTATCTGGTTTGGTCTCCAGAAAATACATAGACTaGGAGATAGGAAGGCCTCACAGGACTTCATTCTATATCTTTACA +
Preference number: 2 (lower is better)
Translates to: CDYLVSGLVSRKYID*EIGRPHRTSFYIFT
Trigger: TGTAAAGATATAGAATGAAGTCCTGTGAGGCCTTCCTATCTCCAAGTCTATGTATTTTCTGGAGACCAAACCAGATACCAGATAATCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242728.5
3UTR CCA 72 bp AGCCAGTGTCTTTCGCATAGGATCTTTTACAGCTGGTaGGGGGAAGAAAGGGATGTTAGTGTGTGGAGGGTG +
Preference number: 3 (lower is better)
Translates to: SQCLSHRIFYSW*GEERDVSVWRV
Trigger: CACCCTCCACACACTAACATCCCTTTCTTCCCCCCACCAGCTGTAAAAGATCCTATGCGAAAGACACTGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242728.5
3UTR-3UTR CAA 90 bp GGTATCTGGTTTGGTCTCCAGAAAATACATAGACTTGGAGATAGGAAGGCCTCAAACTTCTCACTCTGCTaGAACCTCCGTCCTTCGGGA +
Preference number: 3 (lower is better)
Translates to: GIWFGLQKIHRLGDRKASNFSLC*NLRPSG
Trigger: TCCCGAAGGACGGAGGTTCAAGCAGAGTGAGAAGTT...TGAGGCCTTCCTATCTCCAAGTCTATGTATTTTCTGGAGACCAAACCAGATACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242728.5
3UTR-3UTR CAA 90 bp ATTAAGATACATTGGGAACGAGCAGGTAGACAAAGCCAGAGCCTGGAGGCTTGCCTCATAGTCAGACTGTaGTGTCTCACCCCTTACATA +
Preference number: 3 (lower is better)
Translates to: IKIHWERAGRQSQSLEACLIVRL*CLTPYI
Trigger: TATGTAAGGGGTGAGACACAACAGTCTGACTATGAG...GCAAGCCTCCAGGCTCTGGCTTTGTCTACCTGCTCGTTCCCAATGTATCTTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242728.5
3UTR-3UTR CAA 90 bp GGTTTGGTCTCCAGAAAATACATAGACTTGGAGATAGGAAGGCCTCACAGGACTAACTTCTCACTCTGCTaGAACCTCCTTAAGGGTATT +
Preference number: 3 (lower is better)
Translates to: GLVSRKYIDLEIGRPHRTNFSLC*NLLKGI
Trigger: AATACCCTTAAGGAGGTTCAAGCAGAGTGAGAAGTT...AGTCCTGTGAGGCCTTCCTATCTCCAAGTCTATGTATTTTCTGGAGACCAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242728.5
3UTR-3UTR CAA 90 bp GTATCTGGTTTGGTCTCCAGAAAATACATAGACTTGGAGATAGGAAGGCCTCACATAACACCTGTTTTGTaGTTCTTGTTTATGCCTGTC +
Preference number: 3 (lower is better)
Translates to: VSGLVSRKYIDLEIGRPHITPVL*FLFMPV
Trigger: GACAGGCATAAACAAGAACAACAAAACAGGTGTTAT...GTGAGGCCTTCCTATCTCCAAGTCTATGTATTTTCTGGAGACCAAACCAGATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242728.5
CDS-3UTR TCA 90 bp ATTAAGATACATTGGGAACGAGCAGGTAGACAAAGCCAGAGCCTGGAGGCTTGCACGCCACCAGCGAGCTaGGCAGGGCGGCGTCGGGTC +
Preference number: 4 (lower is better)
Translates to: IKIHWERAGRQSQSLEACTPPAS*AGRRRV
Trigger: GACCCGACGCCGCCCTGCTCAGCTCGCTGGTGGCGT...GCAAGCCTCCAGGCTCTGGCTTTGTCTACCTGCTCGTTCCCAATGTATCTTAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242728.5
CDS-3UTR TCA 90 bp ATTAAGATACATTGGGAACGAGCAGGTAGACAAAGCCAGAGCCTGGAGGCTTGCGCTGAGTCCGCTGGATaGCGGGCACGCAGTAGGCGA +
Preference number: 4 (lower is better)
Translates to: IKIHWERAGRQSQSLEACAESAG*RARSRR
Trigger: TCGCCTACTGCGTGCCCGTCATCCAGCGGACTCAGC...GCAAGCCTCCAGGCTCTGGCTTTGTCTACCTGCTCGTTCCCAATGTATCTTAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242728.5
CDS-3UTR GCA 90 bp GGTTTGGTCTCCAGAAAATACATAGACTTGGAGATAGGAAGGCCTCACAGGACTTCGCCCCCGCGCCTTTaGCTTTCTCGCGGTCCGGCC +
Preference number: 4 (lower is better)
Translates to: GLVSRKYIDLEIGRPHRTSPPRL*LSRGPA
Trigger: GGCCGGACCGCGAGAAAGGCAAAGGCGCGGGGGCGA...AGTCCTGTGAGGCCTTCCTATCTCCAAGTCTATGTATTTTCTGGAGACCAAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242728.5
CDS-3UTR TCA 90 bp ATTAAGATACATTGGGAACGAGCAGGTAGACAAAGCCAGAGCCTGGAGGCTTGCTGCGAGGGATCTTCCTaGGCAGAGCTCTCCGGGTTC +
Preference number: 4 (lower is better)
Translates to: IKIHWERAGRQSQSLEACCEGSS*AELSGF
Trigger: GAACCCGGAGAGCTCTGCTCAGGAAGATCCCTCGCA...GCAAGCCTCCAGGCTCTGGCTTTGTCTACCTGCTCGTTCCCAATGTATCTTAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242728.5
CDS-3UTR GCA 90 bp TCTGGTTTGGTCTCCAGAAAATACATAGACTTGGAGATAGGAAGGCCTCACAGGTCCCCGGGAGGCTCCTaGTTGATGGTGACGCGGCTC +
Preference number: 4 (lower is better)
Translates to: SGLVSRKYIDLEIGRPHRSPGGS*LMVTRL
Trigger: GAGCCGCGTCACCATCAAGCAGGAGCCTCCCGGGGA...CCTGTGAGGCCTTCCTATCTCCAAGTCTATGTATTTTCTGGAGACCAAACCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242728.5
CDS-3UTR GCA 90 bp ATTAAGATACATTGGGAACGAGCAGGTAGACAAAGCCAGAGCCTGGAGGCTTGCCACGTAGGCGGCAGCTaGAGAAGGCGAGAGGAAGCA +
Preference number: 4 (lower is better)
Translates to: IKIHWERAGRQSQSLEACHVGGS*RRREEA
Trigger: TGCTTCCTCTCGCCTTCTGCAGCTGCCGCCTACGTG...GCAAGCCTCCAGGCTCTGGCTTTGTCTACCTGCTCGTTCCCAATGTATCTTAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242728.5
CDS-3UTR CCA 90 bp ATTAAGATACATTGGGAACGAGCAGGTAGACAAAGCCAGAGCCTGGAGGCTTGCAGGCTTGGGAGACCTTaGGGGGATCTGTGCGTCTCC +
Preference number: 4 (lower is better)
Translates to: IKIHWERAGRQSQSLEACRLGRP*GDLCVS
Trigger: GGAGACGCACAGATCCCCCCAAGGTCTCCCAAGCCT...GCAAGCCTCCAGGCTCTGGCTTTGTCTACCTGCTCGTTCCCAATGTATCTTAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242728.5
CDS-3UTR TCA 90 bp TCTTGTTTATGCCTGTCGTGCATCTATTACACTTCCTCCCTTAAAGACCTTAAGAGCTCGGCGCTGGGCTaGGTCCGCTGGATGACGGGC +
Preference number: 4 (lower is better)
Translates to: SCLCLSCIYYTSSLKDLKSSALG*VRWMTG
Trigger: GCCCGTCATCCAGCGGACTCAGCCCAGCGCCGAGCT...CTTAAGGTCTTTAAGGGAGGAAGTGTAATAGATGCACGACAGGCATAAACAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242728.5
CDS-3UTR GCA 90 bp TCTGGTTTGGTCTCCAGAAAATACATAGACTTGGAGATAGGAAGGCCTCACAGGTCGCGCCGGCCCCACTaGGCTGGTAGTTTGCTCTCA +
Preference number: 4 (lower is better)
Translates to: SGLVSRKYIDLEIGRPHRSRRPH*AGSLLS
Trigger: TGAGAGCAAACTACCAGCGCAGTGGGGCCGGCGCGA...CCTGTGAGGCCTTCCTATCTCCAAGTCTATGTATTTTCTGGAGACCAAACCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242728.5
CDS-3UTR GCA 90 bp TTGCACTTTTCATTAAGATACATTGGGAACGAGCAGGTAGACAAAGCCAGAGCCCCGAGGGAGCGCCGGTaGCTTTGCTCAGAGGGACCT +
Preference number: 4 (lower is better)
Translates to: LHFSLRYIGNEQVDKARAPRERR*LCSEGP
Trigger: AGGTCCCTCTGAGCAAAGGCACCGGCGCTCCCTCGG...GGCTCTGGCTTTGTCTACCTGCTCGTTCCCAATGTATCTTAATGAAAAGTGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242728.5
CDS-3UTR GCA 90 bp AACCACTTCAGAATAGGTTGCAACGTGAGAAACTGCATCCTCACTTCTTTGAAAAGGGGCTCCAGCTTCTaGCCCGCGCGCTCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: NHFRIGCNVRNCILTSLKRGSSF*PARSRQ
Trigger: CTGCCTGGAGCGCGCGGGGCAGAAGCTGGAGCCCCT...TTTCAAAGAAGTGAGGATGCAGTTTCTCACGTTGCAACCTATTCTGAAGTGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242728.5
CDS-3UTR CCA 90 bp TCCATGTCAACTCCAAAGACGTCAAAGGTGTTAACATCTTTCCCCTACCCCGGGAAGTGGTTGATCAGCTaGACACACCGCGGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: SMSTPKTSKVLTSFPYPGKWLIS*THRGSL
Trigger: CAGGGAGCCGCGGTGTGTCCAGCTGATCAACCACTT...CCCGGGGTAGGGGAAAGATGTTAACACCTTTGACGTCTTTGGAGTTGACATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242728.5
CDS-3UTR CCA 90 bp TCCATGTCAACTCCAAAGACGTCAAAGGTGTTAACATCTTTCCCCTACCCCGGGGCCACGGCGTGCAAGTaGTTGATCAGCTGGACACAC +
Preference number: 4 (lower is better)
Translates to: SMSTPKTSKVLTSFPYPGATACK*LISWTH
Trigger: GTGTGTCCAGCTGATCAACCACTTGCACGCCGTGGC...CCCGGGGTAGGGGAAAGATGTTAACACCTTTGACGTCTTTGGAGTTGACATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000242728.5
CDS-3UTR TCA 90 bp TTGCACTTTTCATTAAGATACATTGGGAACGAGCAGGTAGACAAAGCCAGAGCCCGGCGTGCAAGTGGTTaGTCAGCTGGACACACCGCG +
Preference number: 4 (lower is better)
Translates to: LHFSLRYIGNEQVDKARARRASG*SAGHTA
Trigger: CGCGGTGTGTCCAGCTGATCAACCACTTGCACGCCG...GGCTCTGGCTTTGTCTACCTGCTCGTTCCCAATGTATCTTAATGAAAAGTGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242728.5
CDS-3UTR TCA 90 bp GGTTTGGTCTCCAGAAAATACATAGACTTGGAGATAGGAAGGCCTCACAGGACTCTCAGAGGGACCTGTTaGGTCAACAGCTGCGGGGTG +
Preference number: 4 (lower is better)
Translates to: GLVSRKYIDLEIGRPHRTLRGTC*VNSCGV
Trigger: CACCCCGCAGCTGTTGACTCAACAGGTCCCTCTGAG...AGTCCTGTGAGGCCTTCCTATCTCCAAGTCTATGTATTTTCTGGAGACCAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242728.5
CDS-3UTR GCA 90 bp TCTGGTTTGGTCTCCAGAAAATACATAGACTTGGAGATAGGAAGGCCTCACAGGGAGCGCCGGTGCCTTTaGTCAGAGGGACCTGTTGAG +
Preference number: 4 (lower is better)
Translates to: SGLVSRKYIDLEIGRPHRERRCL*SEGPVE
Trigger: CTCAACAGGTCCCTCTGAGCAAAGGCACCGGCGCTC...CCTGTGAGGCCTTCCTATCTCCAAGTCTATGTATTTTCTGGAGACCAAACCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242728.5
CDS-3UTR CCA 90 bp GTATCTGGTTTGGTCTCCAGAAAATACATAGACTTGGAGATAGGAAGGCCTCACCACACCGCGGCTCCCTaGGTGTCCAGCTCTCAAACC +
Preference number: 4 (lower is better)
Translates to: VSGLVSRKYIDLEIGRPHHTAAP*VSSSQT
Trigger: GGTTTGAGAGCTGGACACCCAGGGAGCCGCGGTGTG...GTGAGGCCTTCCTATCTCCAAGTCTATGTATTTTCTGGAGACCAAACCAGATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242728.5
CDS-3UTR CCA 90 bp GTTTATGCCTGTCGTGCATCTATTACACTTCCTCCCTTAAAGACCTTAAGGGTACCAGCTTCATCCTCTTaGGCGCCGGCGAGTCCTCCC +
Preference number: 4 (lower is better)
Translates to: VYACRASITLPPLKTLRVPASSS*APASPP
Trigger: GGGAGGACTCGCCGGCGCCCAAGAGGATGAAGCTGG...TACCCTTAAGGTCTTTAAGGGAGGAAGTGTAATAGATGCACGACAGGCATAAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242728.5
CDS-3UTR GCA 90 bp ATTAAGATACATTGGGAACGAGCAGGTAGACAAAGCCAGAGCCTGGAGGCTTGCACTGCGCTGGTAGTTTaGTCTCACTCCAGGCAGTGT +
Preference number: 4 (lower is better)
Translates to: IKIHWERAGRQSQSLEACTALVV*SHSRQC
Trigger: ACACTGCCTGGAGTGAGAGCAAACTACCAGCGCAGT...GCAAGCCTCCAGGCTCTGGCTTTGTCTACCTGCTCGTTCCCAATGTATCTTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242728.5
CDS-3UTR CCA 90 bp TCTGGTTTGGTCTCCAGAAAATACATAGACTTGGAGATAGGAAGGCCTCACAGGGTGTGGAGGGTGGGGTaGTGCGGGATGAGCAAAACA +
Preference number: 4 (lower is better)
Translates to: SGLVSRKYIDLEIGRPHRVWRVG*CGMSKT
Trigger: TGTTTTGCTCATCCCGCACCACCCCACCCTCCACAC...CCTGTGAGGCCTTCCTATCTCCAAGTCTATGTATTTTCTGGAGACCAAACCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000242728.5
CDS-3UTR CCA 90 bp GTATCTGGTTTGGTCTCCAGAAAATACATAGACTTGGAGATAGGAAGGCCTCACAGGGATGTTAGTGTGTaGAGGGTGGGGTGGTGCGGG +
Preference number: 4 (lower is better)
Translates to: VSGLVSRKYIDLEIGRPHRDVSV*RVGWCG
Trigger: CCCGCACCACCCCACCCTCCACACACTAACATCCCT...GTGAGGCCTTCCTATCTCCAAGTCTATGTATTTTCTGGAGACCAAACCAGATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242728.5
CDS-3UTR TCA 90 bp TCCATGTCAACTCCAAAGACGTCAAAGGTGTTAACATCTTTCCCCTACCCCGGGATCCATCTCCTTCCCTaGCTTAGTTCTGACGATGGC +
Preference number: 4 (lower is better)
Translates to: SMSTPKTSKVLTSFPYPGIHLLP*LSSDDG
Trigger: GCCATCGTCAGAACTAAGTCAGGGAAGGAGATGGAT...CCCGGGGTAGGGGAAAGATGTTAACACCTTTGACGTCTTTGGAGTTGACATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242728.5
CDS-3UTR GCA 90 bp GTTTATGCCTGTCGTGCATCTATTACACTTCCTCCCTTAAAGACCTTAAGGGTATGGGTGGCCACGGCGTaGAAGTGGTTGATCAGCTGG +
Preference number: 4 (lower is better)
Translates to: VYACRASITLPPLKTLRVWVATA*KWLISW
Trigger: CCAGCTGATCAACCACTTGCACGCCGTGGCCACCCA...TACCCTTAAGGTCTTTAAGGGAGGAAGTGTAATAGATGCACGACAGGCATAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242728.5
CDS-3UTR CCA 90 bp AACCACTTCAGAATAGGTTGCAACGTGAGAAACTGCATCCTCACTTCTTTGAAATGGGCAAGAACTGGGTaGCCACGGCGTGCAAGTGGT +
Preference number: 4 (lower is better)
Translates to: NHFRIGCNVRNCILTSLKWARTG*PRRASG
Trigger: ACCACTTGCACGCCGTGGCCACCCAGTTCTTGCCCA...TTTCAAAGAAGTGAGGATGCAGTTTCTCACGTTGCAACCTATTCTGAAGTGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242728.5
CDS-3UTR CCA 90 bp AGAGTGGGAATAGATGCACTTGAGATGTGTATGTATAGATACCTATCTATGGATGGGGTGGGCAAGAACTaGGTGGCCACGGCGTGCAAG +
Preference number: 4 (lower is better)
Translates to: RVGIDALEMCMYRYLSMDGVGKN*VATACK
Trigger: CTTGCACGCCGTGGCCACCCAGTTCTTGCCCACCCC...ATCCATAGATAGGTATCTATACATACACATCTCAAGTGCATCTATTCCCACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242728.5
CDS-3UTR TCA 90 bp ATTAAGATACATTGGGAACGAGCAGGTAGACAAAGCCAGAGCCTGGAGGCTTGCTCTTCAGTGCAGTGTTaGAAGTGTGAAGCAGTTGGT +
Preference number: 4 (lower is better)
Translates to: IKIHWERAGRQSQSLEACSSVQC*KCEAVG
Trigger: ACCAACTGCTTCACACTTTCAACACTGCACTGAAGA...GCAAGCCTCCAGGCTCTGGCTTTGTCTACCTGCTCGTTCCCAATGTATCTTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242728.5
CDS-3UTR TCA 90 bp TCCATGTCAACTCCAAAGACGTCAAAGGTGTTAACATCTTTCCCCTACCCCGGGTGTCTCTCTTGCAAATaGGGAATTCCTTCGTCCATG +
Preference number: 4 (lower is better)
Translates to: SMSTPKTSKVLTSFPYPGCLSCK*GIPSSM
Trigger: CATGGACGAAGGAATTCCTCATTTGCAAGAGAGACA...CCCGGGGTAGGGGAAAGATGTTAACACCTTTGACGTCTTTGGAGTTGACATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242728.5
CDS-3UTR TCA 90 bp GTTTATGCCTGTCGTGCATCTATTACACTTCCTCCCTTAAAGACCTTAAGGGTAACTTCTCACTCTGCTTaGACCTCCGTCCTTCGGGAC +
Preference number: 4 (lower is better)
Translates to: VYACRASITLPPLKTLRVTSHSA*TSVLRD
Trigger: GTCCCGAAGGACGGAGGTTCAAGCAGAGTGAGAAGT...TACCCTTAAGGTCTTTAAGGGAGGAAGTGTAATAGATGCACGACAGGCATAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242728.5
CDS-3UTR CCA 90 bp AACCACTTCAGAATAGGTTGCAACGTGAGAAACTGCATCCTCACTTCTTTGAAAGGGAGCTTCCTTTCCTaGCTGCGAGGGATCTTCCTG +
Preference number: 4 (lower is better)
Translates to: NHFRIGCNVRNCILTSLKGSFLS*LRGIFL
Trigger: CAGGAAGATCCCTCGCAGCCAGGAAAGGAAGCTCCC...TTTCAAAGAAGTGAGGATGCAGTTTCTCACGTTGCAACCTATTCTGAAGTGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242728.5
CDS-3UTR CCA 90 bp GGTATCTGGTTTGGTCTCCAGAAAATACATAGACTTGGAGATAGGAAGGCCTCAGACAAAGCCAGAGCCTaGAGGCTTGCAAGAGATTGG +
Preference number: 4 (lower is better)
Translates to: GIWFGLQKIHRLGDRKASDKARA*RLARDW
Trigger: CCAATCTCTTGCAAGCCTCCAGGCTCTGGCTTTGTC...TGAGGCCTTCCTATCTCCAAGTCTATGTATTTTCTGGAGACCAAACCAGATACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242728.5
CDS-3UTR TCA 90 bp GTATCTGGTTTGGTCTCCAGAAAATACATAGACTTGGAGATAGGAAGGCCTCACGCATCCAAGTCGGACTaGATGGGCGATTTCAGAGAT +
Preference number: 4 (lower is better)
Translates to: VSGLVSRKYIDLEIGRPHASKSD*MGDFRD
Trigger: ATCTCTGAAATCGCCCATTCAGTCCGACTTGGATGC...GTGAGGCCTTCCTATCTCCAAGTCTATGTATTTTCTGGAGACCAAACCAGATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242728.5
CDS-3UTR TCA 90 bp ATTAAGATACATTGGGAACGAGCAGGTAGACAAAGCCAGAGCCTGGAGGCTTGCGAGATTGGAAATGTGTaGCATCAAGCCAATGACAAA +
Preference number: 4 (lower is better)
Translates to: IKIHWERAGRQSQSLEACEIGNV*HQANDK
Trigger: TTTGTCATTGGCTTGATGTCACACATTTCCAATCTC...GCAAGCCTCCAGGCTCTGGCTTTGTCTACCTGCTCGTTCCCAATGTATCTTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242728.5
CDS-3UTR GCA 90 bp GTATCTGGTTTGGTCTCCAGAAAATACATAGACTTGGAGATAGGAAGGCCTCACCAGAGCCTGGAGGCTTaGAAGAGATTGGAAATGTGT +
Preference number: 4 (lower is better)
Translates to: VSGLVSRKYIDLEIGRPHQSLEA*KRLEMC
Trigger: ACACATTTCCAATCTCTTGCAAGCCTCCAGGCTCTG...GTGAGGCCTTCCTATCTCCAAGTCTATGTATTTTCTGGAGACCAAACCAGATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242728.5
CDS-3UTR TCA 90 bp AACCACTTCAGAATAGGTTGCAACGTGAGAAACTGCATCCTCACTTCTTTGAAATCTTTGGCGCATGTTTaGAATCCCGAGTGGAACGCA +
Preference number: 4 (lower is better)
Translates to: NHFRIGCNVRNCILTSLKSLAHV*NPEWNA
Trigger: TGCGTTCCACTCGGGATTTCAAACATGCGCCAAAGA...TTTCAAAGAAGTGAGGATGCAGTTTCTCACGTTGCAACCTATTCTGAAGTGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242728.5
CDS-3UTR CCA 90 bp TCTTGTTTATGCCTGTCGTGCATCTATTACACTTCCTCCCTTAAAGACCTTAAGCCAAGTCGGACTGAATaGGCGATTTCAGAGATCGCT +
Preference number: 4 (lower is better)
Translates to: SCLCLSCIYYTSSLKDLKPSRTE*AISEIA
Trigger: AGCGATCTCTGAAATCGCCCATTCAGTCCGACTTGG...CTTAAGGTCTTTAAGGGAGGAAGTGTAATAGATGCACGACAGGCATAAACAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242728.5
CDS-3UTR CCA 90 bp GGTTTGGTCTCCAGAAAATACATAGACTTGGAGATAGGAAGGCCTCACAGGACTATTGCAAGACTTCTTTaGCGCATGTTTGAAATCCCG +
Preference number: 4 (lower is better)
Translates to: GLVSRKYIDLEIGRPHRTIARLL*RMFEIP
Trigger: CGGGATTTCAAACATGCGCCAAAGAAGTCTTGCAAT...AGTCCTGTGAGGCCTTCCTATCTCCAAGTCTATGTATTTTCTGGAGACCAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242728.5
CDS-3UTR CCA 90 bp TCCATGTCAACTCCAAAGACGTCAAAGGTGTTAACATCTTTCCCCTACCCCGGGCTCACAGTGCTACCTTaGCAACAAACTAAAAATATC +
Preference number: 4 (lower is better)
Translates to: SMSTPKTSKVLTSFPYPGLTVLP*QQTKNI
Trigger: GATATTTTTAGTTTGTTGCCAAGGTAGCACTGTGAG...CCCGGGGTAGGGGAAAGATGTTAACACCTTTGACGTCTTTGGAGTTGACATGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000242728.5
CDS-3UTR CCA 90 bp GGTTTGGTCTCCAGAAAATACATAGACTTGGAGATAGGAAGGCCTCACAGGACTAGGCTTGCAAGAGATTaGAAATGTGTGACATCAAGC +
Preference number: 4 (lower is better)
Translates to: GLVSRKYIDLEIGRPHRTRLARD*KCVTSS
Trigger: GCTTGATGTCACACATTTCCAATCTCTTGCAAGCCT...AGTCCTGTGAGGCCTTCCTATCTCCAAGTCTATGTATTTTCTGGAGACCAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242728.5
CDS-3UTR TCA 90 bp TCTGGTTTGGTCTCCAGAAAATACATAGACTTGGAGATAGGAAGGCCTCACAGGAAAGCAATTATCTTCTaGTGCTGTTGCTCGGTTAAG +
Preference number: 4 (lower is better)
Translates to: SGLVSRKYIDLEIGRPHRKAIIF*CCCSVK
Trigger: CTTAACCGAGCAACAGCATCAGAAGATAATTGCTTT...CCTGTGAGGCCTTCCTATCTCCAAGTCTATGTATTTTCTGGAGACCAAACCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242728.5
CDS-3UTR GCA 90 bp TTGCACTTTTCATTAAGATACATTGGGAACGAGCAGGTAGACAAAGCCAGAGCCTCGTCCATGTTCAACTaGTGTTCGTTTCCTCTGTTT +
Preference number: 4 (lower is better)
Translates to: LHFSLRYIGNEQVDKARASSMFN*CSFPLF
Trigger: AAACAGAGGAAACGAACAGCAGTTGAACATGGACGA...GGCTCTGGCTTTGTCTACCTGCTCGTTCCCAATGTATCTTAATGAAAAGTGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242728.5
CDS-3UTR CCA 90 bp GGTATCTGGTTTGGTCTCCAGAAAATACATAGACTTGGAGATAGGAAGGCCTCAATTTGTAGGTATCCTTaGTGTCGTCTCGTTTCATGC +
Preference number: 4 (lower is better)
Translates to: GIWFGLQKIHRLGDRKASICRYP*CRLVSC
Trigger: GCATGAAACGAGACGACACCAAGGATACCTACAAAT...TGAGGCCTTCCTATCTCCAAGTCTATGTATTTTCTGGAGACCAAACCAGATACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242728.5
CDS-3UTR CCA 90 bp GTTTATGCCTGTCGTGCATCTATTACACTTCCTCCCTTAAAGACCTTAAGGGTAATCTTTTACAGCTGGTaGGGGGAAGAAAGGGATGTT +
Preference number: 4 (lower is better)
Translates to: VYACRASITLPPLKTLRVIFYSW*GEERDV
Trigger: AACATCCCTTTCTTCCCCCCACCAGCTGTAAAAGAT...TACCCTTAAGGTCTTTAAGGGAGGAAGTGTAATAGATGCACGACAGGCATAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242728.5
3UTR CAA 72 bp CTGGTATCTGGTTTGGTCTCCAGAAAATACATAGACTaGGAGATAGGAAGGCCTCACAGGACTTCATTCTAT +
Preference number: 4 (lower is better)
Translates to: LVSGLVSRKYID*EIGRPHRTSFY
Trigger: ATAGAATGAAGTCCTGTGAGGCCTTCCTATCTCCAAGTCTATGTATTTTCTGGAGACCAAACCAGATACCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242728.5
CDS-3UTR TCA 90 bp GTTTATGCCTGTCGTGCATCTATTACACTTCCTCCCTTAAAGACCTTAAGGGTAACTTCTCACTCTGCTTaGACCTCCTTAAGGGTATTT +
Preference number: 4 (lower is better)
Translates to: VYACRASITLPPLKTLRVTSHSA*TSLRVF
Trigger: AAATACCCTTAAGGAGGTTCAAGCAGAGTGAGAAGT...TACCCTTAAGGTCTTTAAGGGAGGAAGTGTAATAGATGCACGACAGGCATAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242728.5
CDS-3UTR GCA 90 bp GTTTATGCCTGTCGTGCATCTATTACACTTCCTCCCTTAAAGACCTTAAGGGTATGTCGTCTCGTTTCATaGTCCTTTTGGGTTTACACA +
Preference number: 4 (lower is better)
Translates to: VYACRASITLPPLKTLRVCRLVS*SFWVYT
Trigger: TGTGTAAACCCAAAAGGAGCATGAAACGAGACGACA...TACCCTTAAGGTCTTTAAGGGAGGAAGTGTAATAGATGCACGACAGGCATAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242728.5
CDS-3UTR GCA 90 bp TTGCACTTTTCATTAAGATACATTGGGAACGAGCAGGTAGACAAAGCCAGAGCCTACATAACAACTACCTaGTGTTCCATGTCAACTCCA +
Preference number: 4 (lower is better)
Translates to: LHFSLRYIGNEQVDKARAYITTT*CSMSTP
Trigger: TGGAGTTGACATGGAACAGCAGGTAGTTGTTATGTA...GGCTCTGGCTTTGTCTACCTGCTCGTTCCCAATGTATCTTAATGAAAAGTGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242728.5
CDS-3UTR CCA 90 bp TCTGGTTTGGTCTCCAGAAAATACATAGACTTGGAGATAGGAAGGCCTCACAGGTTCATTAAGATACATTaGGAACGAGCAGGTAGACAA +
Preference number: 4 (lower is better)
Translates to: SGLVSRKYIDLEIGRPHRFIKIH*ERAGRQ
Trigger: TTGTCTACCTGCTCGTTCCCAATGTATCTTAATGAA...CCTGTGAGGCCTTCCTATCTCCAAGTCTATGTATTTTCTGGAGACCAAACCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242728.5
CDS-3UTR GCA 90 bp AGAGTGGGAATAGATGCACTTGAGATGTGTATGTATAGATACCTATCTATGGATAACCGGGAGAGGTATTaGAAGACTTCTTTGGCGCAT +
Preference number: 4 (lower is better)
Translates to: RVGIDALEMCMYRYLSMDNRERY*KTSLAH
Trigger: ATGCGCCAAAGAAGTCTTGCAATACCTCTCCCGGTT...ATCCATAGATAGGTATCTATACATACACATCTCAAGTGCATCTATTCCCACTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242728.5
CDS-3UTR GCA 90 bp GTTTATGCCTGTCGTGCATCTATTACACTTCCTCCCTTAAAGACCTTAAGGGTATGCAACGTGAGAAACTaGATCCTCACTTCTTTGAAA +
Preference number: 4 (lower is better)
Translates to: VYACRASITLPPLKTLRVCNVRN*ILTSLK
Trigger: TTTCAAAGAAGTGAGGATGCAGTTTCTCACGTTGCA...TACCCTTAAGGTCTTTAAGGGAGGAAGTGTAATAGATGCACGACAGGCATAAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242728.5
CDS-3UTR GCA 90 bp TCTTGTTTATGCCTGTCGTGCATCTATTACACTTCCTCCCTTAAAGACCTTAAGAACAGCAGCAGCAAATaGACCAAACTGACGAAAAGA +
Preference number: 4 (lower is better)
Translates to: SCLCLSCIYYTSSLKDLKNSSSK*TKLTKR
Trigger: TCTTTTCGTCAGTTTGGTGCATTTGCTGCTGCTGTT...CTTAAGGTCTTTAAGGGAGGAAGTGTAATAGATGCACGACAGGCATAAACAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242728.5
CDS-3UTR CCA 90 bp AGAGTGGGAATAGATGCACTTGAGATGTGTATGTATAGATACCTATCTATGGATCTGTACAATAATCTGTaGGACGGTAGGCTTGGGAGA +
Preference number: 4 (lower is better)
Translates to: RVGIDALEMCMYRYLSMDLYNNL*DGRLGR
Trigger: TCTCCCAAGCCTACCGTCCCACAGATTATTGTACAG...ATCCATAGATAGGTATCTATACATACACATCTCAAGTGCATCTATTCCCACTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242728.5
CDS-3UTR CCA 90 bp TTGCACTTTTCATTAAGATACATTGGGAACGAGCAGGTAGACAAAGCCAGAGCCATTTGCAATCAAAACTaGCCAGTTAAATGCTTTCGT +
Preference number: 4 (lower is better)
Translates to: LHFSLRYIGNEQVDKARAICNQN*PVKCFR
Trigger: ACGAAAGCATTTAACTGGCCAGTTTTGATTGCAAAT...GGCTCTGGCTTTGTCTACCTGCTCGTTCCCAATGTATCTTAATGAAAAGTGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242728.5
3UTR CAA 72 bp ACAGGAACTCCGAATGTACACATAACACCTGTTTTGTaGTTCTTGTTTATGCCTGTCGTGCATCTATTACAC +
Preference number: 4 (lower is better)
Translates to: TGTPNVHITPVL*FLFMPVVHLLH
Trigger: GTGTAATAGATGCACGACAGGCATAAACAAGAACAACAAAACAGGTGTTATGTGTACATTCGGAGTTCCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242728.5
CDS-3UTR TCA 90 bp AGAGTGGGAATAGATGCACTTGAGATGTGTATGTATAGATACCTATCTATGGATGCAAATGCACCAAACTaGCGAAAAGACCCAGATATT +
Preference number: 4 (lower is better)
Translates to: RVGIDALEMCMYRYLSMDANAPN*RKDPDI
Trigger: AATATCTGGGTCTTTTCGTCAGTTTGGTGCATTTGC...ATCCATAGATAGGTATCTATACATACACATCTCAAGTGCATCTATTCCCACTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242728.5
CDS-3UTR GCA 90 bp GTTTATGCCTGTCGTGCATCTATTACACTTCCTCCCTTAAAGACCTTAAGGGTAAACTGGCCAGTTAAATaGTTTCGTTCACTTTTGAAT +
Preference number: 4 (lower is better)
Translates to: VYACRASITLPPLKTLRVNWPVK*FRSLLN
Trigger: ATTCAAAAGTGAACGAAAGCATTTAACTGGCCAGTT...TACCCTTAAGGTCTTTAAGGGAGGAAGTGTAATAGATGCACGACAGGCATAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242728.5
CDS-3UTR CCA 90 bp AGAGTGGGAATAGATGCACTTGAGATGTGTATGTATAGATACCTATCTATGGATTTCTTTGTGATTATCTaGTATCTGGTTTGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: RVGIDALEMCMYRYLSMDFFVII*YLVWSP
Trigger: TGGAGACCAAACCAGATACCAGATAATCACAAAGAA...ATCCATAGATAGGTATCTATACATACACATCTCAAGTGCATCTATTCCCACTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242728.5
CDS TCA 90 bp TGTCGTTCTCGGCGGCGAGCTCGGCGCTGGGCTGAGTCCGCTGGATaGCGGGCACGCAGTAGGCGAGGGGCTCCAGCTTCTGCCCCGCGC +
Preference number: 5 (lower is better)
Translates to: CRSRRRARRWAESAG*RARSRRGAPASAPR
Trigger: GCGCGGGGCAGAAGCTGGAGCCCCTCGCCTACTGCGTGCCCGTCATCCAGCGGACTCAGCCCAGCGCCGAGCTCGCCGCCGAGAACGACA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242728.5
CDS GCA 90 bp AGCTTCATCCTCTTGGGCGCCGGCGAGTCCTCCCCGGGAGGCTCCTaGTTGATGGTGACGCGGCTCGCCCCCGCGCCTTTGCCTTTCTCG +
Preference number: 5 (lower is better)
Translates to: SFILLGAGESSPGGS*LMVTRLAPAPLPFS
Trigger: CGAGAAAGGCAAAGGCGCGGGGGCGAGCCGCGTCACCATCAAGCAGGAGCCTCCCGGGGAGGACTCGCCGGCGCCCAAGAGGATGAAGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242728.5
CDS TCA 90 bp GCAAGGATTCAGGGAGCTTCCTTTCCTGGCTGCGAGGGATCTTCCTaGGCAGAGCTCTCCGGGTTCCCCGGCTCGCGGGGCCCGGCGAAG +
Preference number: 5 (lower is better)
Translates to: ARIQGASFPGCEGSS*AELSGFPGSRGPAK
Trigger: CTTCGCCGGGCCCCGCGAGCCGGGGAACCCGGAGAGCTCTGCTCAGGAAGATCCCTCGCAGCCAGGAAAGGAAGCTCCCTGAATCCTTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242728.5
CDS TCA 90 bp GCTGCGGGGTGGGCAAGAACTGGGTGGCCACGGCGTGCAAGTGGTTaGTCAGCTGGACACACCGCGGCTCCCTGGGTGTCCAGCTCTCAA +
Preference number: 5 (lower is better)
Translates to: AAGWARTGWPRRASG*SAGHTAAPWVSSSQ
Trigger: TTGAGAGCTGGACACCCAGGGAGCCGCGGTGTGTCCAGCTGATCAACCACTTGCACGCCGTGGCCACCCAGTTCTTGCCCACCCCGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242728.5
ENST00000394326.2
CDS CCA 90 bp GTGGGCAAGAACTGGGTGGCCACGGCGTGCAAGTGGTTGATCAGCTaGACACACCGCGGCTCCCTGGGTGTCCAGCTCTCAAACCGGGAG +
Preference number: 5 (lower is better)
Translates to: VGKNWVATACKWLIS*THRGSLGVQLSNRE
Trigger: CTCCCGGTTTGAGAGCTGGACACCCAGGGAGCCGCGGTGTGTCCAGCTGATCAACCACTTGCACGCCGTGGCCACCCAGTTCTTGCCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242728.5
ENST00000394326.2
CDS CCA 90 bp GGGGCTCTGTACAATAATCTGTGGGACGGTAGGCTTGGGAGACCTTaGGGGGATCTGTGCGTCTCCAGTCTCTCTCTCGCTCTCCCTCTT +
Preference number: 5 (lower is better)
Translates to: GALYNNLWDGRLGRP*GDLCVSSLSLALPL
Trigger: AAGAGGGAGAGCGAGAGAGAGACTGGAGACGCACAGATCCCCCCAAGGTCTCCCAAGCCTACCGTCCCACAGATTATTGTACAGAGCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242728.5
CDS-3UTR CAA 90 bp GTATCTGGTTTGGTCTCCAGAAAATACATAGACTTGGAGATAGGAAGGCCTCACCCGGGAGGCTCCTGCTaGATGGTGACGCGGCTCGCC +
Preference number: 5 (lower is better)
Translates to: VSGLVSRKYIDLEIGRPHPGGSC*MVTRLA
Trigger: GGCGAGCCGCGTCACCATCAAGCAGGAGCCTCCCGG...GTGAGGCCTTCCTATCTCCAAGTCTATGTATTTTCTGGAGACCAAACCAGATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242728.5
CDS-3UTR CAA 90 bp AACCACTTCAGAATAGGTTGCAACGTGAGAAACTGCATCCTCACTTCTTTGAAACTCGCCCCCGCGCCTTaGCCTTTCTCGCGGTCCGGC +
Preference number: 5 (lower is better)
Translates to: NHFRIGCNVRNCILTSLKLAPAP*PFSRSG
Trigger: GCCGGACCGCGAGAAAGGCAAAGGCGCGGGGGCGAG...TTTCAAAGAAGTGAGGATGCAGTTTCTCACGTTGCAACCTATTCTGAAGTGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242728.5
CDS-3UTR CAA 90 bp GGTATCTGGTTTGGTCTCCAGAAAATACATAGACTTGGAGATAGGAAGGCCTCATCCAGCTTCATCCTCTaGGGCGCCGGCGAGTCCTCC +
Preference number: 5 (lower is better)
Translates to: GIWFGLQKIHRLGDRKASSSFIL*GAGESS
Trigger: GGAGGACTCGCCGGCGCCCAAGAGGATGAAGCTGGA...TGAGGCCTTCCTATCTCCAAGTCTATGTATTTTCTGGAGACCAAACCAGATACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242728.5
CDS CCA 90 bp TGGGTGTCCAGCTCTCAAACCGGGAGAGGTATTGCAAGACTTCTTTaGCGCATGTTTGAAATCCCGAGTGGAACGCATCCAAGTCGGACT +
Preference number: 5 (lower is better)
Translates to: WVSSSQTGRGIARLL*RMFEIPSGTHPSRT
Trigger: AGTCCGACTTGGATGCGTTCCACTCGGGATTTCAAACATGCGCCAAAGAAGTCTTGCAATACCTCTCCCGGTTTGAGAGCTGGACACCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242728.5
ENST00000394326.2
CDS-3UTR CAA 90 bp TCTGGTTTGGTCTCCAGAAAATACATAGACTTGGAGATAGGAAGGCCTCACAGGCACTGCGCTGGTAGTTaGCTCTCACTCCAGGCAGTG +
Preference number: 5 (lower is better)
Translates to: SGLVSRKYIDLEIGRPHRHCAGS*LSLQAV
Trigger: CACTGCCTGGAGTGAGAGCAAACTACCAGCGCAGTG...CCTGTGAGGCCTTCCTATCTCCAAGTCTATGTATTTTCTGGAGACCAAACCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242728.5
CDS-3UTR CAA 90 bp ATTAAGATACATTGGGAACGAGCAGGTAGACAAAGCCAGAGCCTGGAGGCTTGCTTCTTTGGCGCATGTTaGAAATCCCGAGTGGAACGC +
Preference number: 5 (lower is better)
Translates to: IKIHWERAGRQSQSLEACFFGAC*KSRVER
Trigger: GCGTTCCACTCGGGATTTCAAACATGCGCCAAAGAA...GCAAGCCTCCAGGCTCTGGCTTTGTCTACCTGCTCGTTCCCAATGTATCTTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242728.5
CDS-3UTR CAA 90 bp TCTTGTTTATGCCTGTCGTGCATCTATTACACTTCCTCCCTTAAAGACCTTAAGACGGCGTGCAAGTGGTaGATCAGCTGGACACACCGC +
Preference number: 5 (lower is better)
Translates to: SCLCLSCIYYTSSLKDLKTACKW*ISWTHR
Trigger: GCGGTGTGTCCAGCTGATCAACCACTTGCACGCCGT...CTTAAGGTCTTTAAGGGAGGAAGTGTAATAGATGCACGACAGGCATAAACAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242728.5
CDS CCA 90 bp CGCATGTTTGAAATCCCGAGTGGAACGCATCCAAGTCGGACTGAATaGGCGATTTCAGAGATCGCTCCCCATTCTGTAAAGCAATTATCT +
Preference number: 5 (lower is better)
Translates to: RMFEIPSGTHPSRTE*AISEIAPHSVKQLS
Trigger: AGATAATTGCTTTACAGAATGGGGAGCGATCTCTGAAATCGCCCATTCAGTCCGACTTGGATGCGTTCCACTCGGGATTTCAAACATGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242728.5
ENST00000394326.2
CDS-3UTR CAA 90 bp AGAGTGGGAATAGATGCACTTGAGATGTGTATGTATAGATACCTATCTATGGATGCTCAGAGGGACCTGTaGAGTCAACAGCTGCGGGGT +
Preference number: 5 (lower is better)
Translates to: RVGIDALEMCMYRYLSMDAQRDL*SQQLRG
Trigger: ACCCCGCAGCTGTTGACTCAACAGGTCCCTCTGAGC...ATCCATAGATAGGTATCTATACATACACATCTCAAGTGCATCTATTCCCACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242728.5
CDS-3UTR CAA 90 bp ATTAAGATACATTGGGAACGAGCAGGTAGACAAAGCCAGAGCCTGGAGGCTTGCAGAAAATACATAGACTaGGAGATAGGAAGGCCTCAC +
Preference number: 5 (lower is better)
Translates to: IKIHWERAGRQSQSLEACRKYID*EIGRPH
Trigger: GTGAGGCCTTCCTATCTCCAAGTCTATGTATTTTCT...GCAAGCCTCCAGGCTCTGGCTTTGTCTACCTGCTCGTTCCCAATGTATCTTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242728.5
CDS-3UTR CAA 90 bp TCTGGTTTGGTCTCCAGAAAATACATAGACTTGGAGATAGGAAGGCCTCACAGGCCAGATGTCCCAGAGTaGTCAATTTCAGATGTTCAG +
Preference number: 5 (lower is better)
Translates to: SGLVSRKYIDLEIGRPHRPDVPE*SISDVQ
Trigger: CTGAACATCTGAAATTGACAACTCTGGGACATCTGG...CCTGTGAGGCCTTCCTATCTCCAAGTCTATGTATTTTCTGGAGACCAAACCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242728.5
CDS-3UTR CAA 90 bp ATTAAGATACATTGGGAACGAGCAGGTAGACAAAGCCAGAGCCTGGAGGCTTGCCGTTTCATGCTCCTTTaGGGTTTACACATATACAAA +
Preference number: 5 (lower is better)
Translates to: IKIHWERAGRQSQSLEACRFMLL*GLHIYK
Trigger: TTTGTATATGTGTAAACCCAAAAGGAGCATGAAACG...GCAAGCCTCCAGGCTCTGGCTTTGTCTACCTGCTCGTTCCCAATGTATCTTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242728.5
CDS-3UTR CAA 90 bp AACCACTTCAGAATAGGTTGCAACGTGAGAAACTGCATCCTCACTTCTTTGAAAAAACCGGGAGAGGTATaGCAAGACTTCTTTGGCGCA +
Preference number: 5 (lower is better)
Translates to: NHFRIGCNVRNCILTSLKKPGEV*QDFFGA
Trigger: TGCGCCAAAGAAGTCTTGCAATACCTCTCCCGGTTT...TTTCAAAGAAGTGAGGATGCAGTTTCTCACGTTGCAACCTATTCTGAAGTGGTT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000242728.5
CDS-3UTR CAA 90 bp GTATCTGGTTTGGTCTCCAGAAAATACATAGACTTGGAGATAGGAAGGCCTCACCCACTTCAGAATAGGTaGCAACGTGAGAAACTGCAT +
Preference number: 5 (lower is better)
Translates to: VSGLVSRKYIDLEIGRPHPLQNR*QREKLH
Trigger: ATGCAGTTTCTCACGTTGCAACCTATTCTGAAGTGG...GTGAGGCCTTCCTATCTCCAAGTCTATGTATTTTCTGGAGACCAAACCAGATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242728.5
CDS-3UTR CAA 90 bp GGTATCTGGTTTGGTCTCCAGAAAATACATAGACTTGGAGATAGGAAGGCCTCACTCATAGTCAGACTGTaGTGTCTCACCCCTTACATA +
Preference number: 5 (lower is better)
Translates to: GIWFGLQKIHRLGDRKASLIVRL*CLTPYI
Trigger: TATGTAAGGGGTGAGACACAACAGTCTGACTATGAG...TGAGGCCTTCCTATCTCCAAGTCTATGTATTTTCTGGAGACCAAACCAGATACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242728.5
CDS TCA 90 bp GGCGATTTCAGAGATCGCTCCCCATTCTGTAAAGCAATTATCTTCTaGTGCTGTTGCTCGGTTAAGGCGGTTAAAGCTTTTAAGTGTTTC +
Preference number: 5 (lower is better)
Translates to: GDFRDRSPFCKAIIF*CCCSVKAVKAFKCF
Trigger: GAAACACTTAAAAGCTTTAACCGCCTTAACCGAGCAACAGCATCAGAAGATAATTGCTTTACAGAATGGGGAGCGATCTCTGAAATCGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242728.5
ENST00000394326.2
CDS-3UTR CAA 90 bp GTATCTGGTTTGGTCTCCAGAAAATACATAGACTTGGAGATAGGAAGGCCTCACAACTTCTCACTCTGCTaGAACCTCCTTAAGGGTATT +
Preference number: 5 (lower is better)
Translates to: VSGLVSRKYIDLEIGRPHNFSLC*NLLKGI
Trigger: AATACCCTTAAGGAGGTTCAAGCAGAGTGAGAAGTT...GTGAGGCCTTCCTATCTCCAAGTCTATGTATTTTCTGGAGACCAAACCAGATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242728.5
CDS TCA 90 bp AGTCCTATAAAATCTCTATGTTCCAGTAACTGTCTCTCTTGCAAATaGGGAATTCCTTCGTCCATGTTCAACTGCTGTTCGTTTCCTCTG +
Preference number: 5 (lower is better)
Translates to: SPIKSLCSSNCLSCK*GIPSSMFNCCSFPL
Trigger: CAGAGGAAACGAACAGCAGTTGAACATGGACGAAGGAATTCCTCATTTGCAAGAGAGACAGTTACTGGAACATAGAGATTTTATAGGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242728.5
ENST00000541271.1
CDS-3UTR CAA 90 bp TCTTGTTTATGCCTGTCGTGCATCTATTACACTTCCTCCCTTAAAGACCTTAAGCCTCTGTTTCGATTTTaGGGGCTCTGTACAATAATC +
Preference number: 5 (lower is better)
Translates to: SCLCLSCIYYTSSLKDLKPLFRF*GLCTII
Trigger: GATTATTGTACAGAGCCCCAAAAATCGAAACAGAGG...CTTAAGGTCTTTAAGGGAGGAAGTGTAATAGATGCACGACAGGCATAAACAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242728.5
CDS CCA 90 bp ATTCTTATATTTTCTGGGAGTCGCACCAGACTATTAACACGCCCTTaGAGAGCAGCAAAGAATGAAAATGTGCATCTTACTGTCAATTTC +
Preference number: 5 (lower is better)
Translates to: ILIFSGSRTRLLTRP*RAAKNENVHLTVNF
Trigger: GAAATTGACAGTAAGATGCACATTTTCATTCTTTGCTGCTCTCCAAGGGCGTGTTAATAGTCTGGTGCGACTCCCAGAAAATATAAGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541271.1
CDS-3UTR CAA 90 bp GTTTATGCCTGTCGTGCATCTATTACACTTCCTCCCTTAAAGACCTTAAGGGTAATATCTTTACAGCATTaGCAATCAAAACTGGCCAGT +
Preference number: 5 (lower is better)
Translates to: VYACRASITLPPLKTLRVISLQH*QSKLAS
Trigger: ACTGGCCAGTTTTGATTGCAAATGCTGTAAAGATAT...TACCCTTAAGGTCTTTAAGGGAGGAAGTGTAATAGATGCACGACAGGCATAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242728.5
CDS-3UTR CAA 90 bp TCTTGTTTATGCCTGTCGTGCATCTATTACACTTCCTCCCTTAAAGACCTTAAGTATCTGGTATCTGGTTaGGTCTCCAGAAAATACATA +
Preference number: 5 (lower is better)
Translates to: SCLCLSCIYYTSSLKDLKYLVSG*VSRKYI
Trigger: TATGTATTTTCTGGAGACCAAACCAGATACCAGATA...CTTAAGGTCTTTAAGGGAGGAAGTGTAATAGATGCACGACAGGCATAAACAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242728.5
CDS-3UTR CAA 90 bp AGAGTGGGAATAGATGCACTTGAGATGTGTATGTATAGATACCTATCTATGGATATAACACCTGTTTTGTaGTTCTTGTTTATGCCTGTC +
Preference number: 5 (lower is better)
Translates to: RVGIDALEMCMYRYLSMDITPVL*FLFMPV
Trigger: GACAGGCATAAACAAGAACAACAAAACAGGTGTTAT...ATCCATAGATAGGTATCTATACATACACATCTCAAGTGCATCTATTCCCACTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242728.5
CDS TCA 72 bp GCGCGCCTCCGCCTCCGCCGAACGCCACCAGCGAGCTaGGCAGGGCGGCGTCGGGTCTCAGCAGCGCGGCCG +
Preference number: 6 (lower is better)
Translates to: ARLRLRRTPPAS*AGRRRVSAARP
Trigger: CGGCCGCGCTGCTGAGACCCGACGCCGCCCTGCTCAGCTCGCTGGTGGCGTTCGGCGGAGGCGGAGGCGCGC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242728.5
CDS GCA 72 bp CTCTTGGGCGCCGGCGAGTCCTCCCCGGGAGGCTCCTaGTTGATGGTGACGCGGCTCGCCCCCGCGCCTTTG +
Preference number: 6 (lower is better)
Translates to: LLGAGESSPGGS*LMVTRLAPAPL
Trigger: CAAAGGCGCGGGGGCGAGCCGCGTCACCATCAAGCAGGAGCCTCCCGGGGAGGACTCGCCGGCGCCCAAGAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242728.5
CDS CCA 72 bp CGCTGCCGCCGCCGCGGGAATCCAGCTTCATCCTCTTaGGCGCCGGCGAGTCCTCCCCGGGAGGCTCCTGCT +
Preference number: 6 (lower is better)
Translates to: RCRRRGNPASSS*APASPPREAPA
Trigger: AGCAGGAGCCTCCCGGGGAGGACTCGCCGGCGCCCAAGAGGATGAAGCTGGATTCCCGCGGCGGCGGCAGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242728.5
CDS CAA 72 bp TTGGGCGCCGGCGAGTCCTCCCCGGGAGGCTCCTGCTaGATGGTGACGCGGCTCGCCCCCGCGCCTTTGCCT +
Preference number: 6 (lower is better)
Translates to: LGAGESSPGGSC*MVTRLAPAPLP
Trigger: AGGCAAAGGCGCGGGGGCGAGCCGCGTCACCATCAAGCAGGAGCCTCCCGGGGAGGACTCGCCGGCGCCCAA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242728.5
CDS TCA 72 bp CGGCGGCGAGCTCGGCGCTGGGCTGAGTCCGCTGGATaGCGGGCACGCAGTAGGCGAGGGGCTCCAGCTTCT +
Preference number: 6 (lower is better)
Translates to: RRRARRWAESAG*RARSRRGAPAS
Trigger: AGAAGCTGGAGCCCCTCGCCTACTGCGTGCCCGTCATCCAGCGGACTCAGCCCAGCGCCGAGCTCGCCGCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242728.5
CDS GCA 72 bp CCGCGGACCCGGCGGCCGAGGGAGCGCCGGTGCCTTTaGTCAGAGGGACCTGTTGAGTCAACAGCTGCGGGG +
Preference number: 6 (lower is better)
Translates to: PRTRRPRERRCL*SEGPVESTAAG
Trigger: CCCCGCAGCTGTTGACTCAACAGGTCCCTCTGAGCAAAGGCACCGGCGCTCCCTCGGCCGCCGGGTCCGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242728.5
CDS GCA 72 bp GGGCGGCCGCGGACCCGGCGGCCGAGGGAGCGCCGGTaGCTTTGCTCAGAGGGACCTGTTGAGTCAACAGCT +
Preference number: 6 (lower is better)
Translates to: GRPRTRRPRERR*LCSEGPVESTA
Trigger: AGCTGTTGACTCAACAGGTCCCTCTGAGCAAAGGCACCGGCGCTCCCTCGGCCGCCGGGTCCGCGGCCGCCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242728.5
CDS CAA 72 bp TCCTGCTTGATGGTGACGCGGCTCGCCCCCGCGCCTTaGCCTTTCTCGCGGTCCGGCCGGGCCTCGGCTTCG +
Preference number: 6 (lower is better)
Translates to: SCLMVTRLAPAP*PFSRSGRASAS
Trigger: CGAAGCCGAGGCCCGGCCGGACCGCGAGAAAGGCAAAGGCGCGGGGGCGAGCCGCGTCACCATCAAGCAGGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242728.5
CDS CAA 90 bp TTCATCCTCTTGGGCGCCGGCGAGTCCTCCCCGGGAGGCTCCTGCTaGATGGTGACGCGGCTCGCCCCCGCGCCTTTGCCTTTCTCGCGG +
Preference number: 6 (lower is better)
Translates to: FILLGAGESSPGGSC*MVTRLAPAPLPFSR
Trigger: CCGCGAGAAAGGCAAAGGCGCGGGGGCGAGCCGCGTCACCATCAAGCAGGAGCCTCCCGGGGAGGACTCGCCGGCGCCCAAGAGGATGAA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242728.5
CDS GCA 72 bp AGCTGCGGGGTGGGCAAGAACTGGGTGGCCACGGCGTaGAAGTGGTTGATCAGCTGGACACACCGCGGCTCC +
Preference number: 6 (lower is better)
Translates to: SCGVGKNWVATA*KWLISWTHRGS
Trigger: GGAGCCGCGGTGTGTCCAGCTGATCAACCACTTGCACGCCGTGGCCACCCAGTTCTTGCCCACCCCGCAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242728.5
ENST00000394326.2
CDS CCA 72 bp GGGGTGGGCAAGAACTGGGTGGCCACGGCGTGCAAGTaGTTGATCAGCTGGACACACCGCGGCTCCCTGGGT +
Preference number: 6 (lower is better)
Translates to: GVGKNWVATACK*LISWTHRGSLG
Trigger: ACCCAGGGAGCCGCGGTGTGTCCAGCTGATCAACCACTTGCACGCCGTGGCCACCCAGTTCTTGCCCACCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242728.5
ENST00000394326.2
CDS CAA 90 bp AGCTGCGGGGTGGGCAAGAACTGGGTGGCCACGGCGTGCAAGTGGTaGATCAGCTGGACACACCGCGGCTCCCTGGGTGTCCAGCTCTCA +
Preference number: 6 (lower is better)
Translates to: SCGVGKNWVATACKW*ISWTHRGSLGVQLS
Trigger: TGAGAGCTGGACACCCAGGGAGCCGCGGTGTGTCCAGCTGATCAACCACTTGCACGCCGTGGCCACCCAGTTCTTGCCCACCCCGCAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242728.5
ENST00000394326.2
CDS TCA 72 bp TGGGCAAGAACTGGGTGGCCACGGCGTGCAAGTGGTTaGTCAGCTGGACACACCGCGGCTCCCTGGGTGTCC +
Preference number: 6 (lower is better)
Translates to: WARTGWPRRASG*SAGHTAAPWVS
Trigger: GGACACCCAGGGAGCCGCGGTGTGTCCAGCTGATCAACCACTTGCACGCCGTGGCCACCCAGTTCTTGCCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242728.5
ENST00000394326.2
CDS CAA 72 bp GTGGGCAAGAACTGGGTGGCCACGGCGTGCAAGTGGTaGATCAGCTGGACACACCGCGGCTCCCTGGGTGTC +
Preference number: 6 (lower is better)
Translates to: VGKNWVATACKW*ISWTHRGSLGV
Trigger: GACACCCAGGGAGCCGCGGTGTGTCCAGCTGATCAACCACTTGCACGCCGTGGCCACCCAGTTCTTGCCCAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242728.5
ENST00000394326.2
CDS CCA 72 bp AACTGGGTGGCCACGGCGTGCAAGTGGTTGATCAGCTaGACACACCGCGGCTCCCTGGGTGTCCAGCTCTCA +
Preference number: 6 (lower is better)
Translates to: NWVATACKWLIS*THRGSLGVQLS
Trigger: TGAGAGCTGGACACCCAGGGAGCCGCGGTGTGTCCAGCTGATCAACCACTTGCACGCCGTGGCCACCCAGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242728.5
ENST00000394326.2
CDS GCA 72 bp CACACGCACACACACGCACACTCGCGCCGGCCCCACTaGGCTGGTAGTTTGCTCTCACTCCAGGCAGTGTTT +
Preference number: 6 (lower is better)
Translates to: HTHTHAHSRRPH*AGSLLSLQAVF
Trigger: AAACACTGCCTGGAGTGAGAGCAAACTACCAGCGCAGTGGGGCCGGCGCGAGTGTGCGTGTGTGTGCGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242728.5
CDS CCA 72 bp TGCTCAGAGGGACCTGTTGAGTCAACAGCTGCGGGGTaGGCAAGAACTGGGTGGCCACGGCGTGCAAGTGGT +
Preference number: 6 (lower is better)
Translates to: CSEGPVESTAAG*ARTGWPRRASG
Trigger: ACCACTTGCACGCCGTGGCCACCCAGTTCTTGCCCACCCCGCAGCTGTTGACTCAACAGGTCCCTCTGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242728.5
CDS CAA 90 bp ACACCGCGGCTCCCTGGGTGTCCAGCTCTCAAACCGGGAGAGGTATaGCAAGACTTCTTTGGCGCATGTTTGAAATCCCGAGTGGAACGC +
Preference number: 6 (lower is better)
Translates to: TPRLPGCPALKPGEV*QDFFGACLKSRVER
Trigger: GCGTTCCACTCGGGATTTCAAACATGCGCCAAAGAAGTCTTGCAATACCTCTCCCGGTTTGAGAGCTGGACACCCAGGGAGCCGCGGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242728.5
ENST00000394326.2
CDS CCA 72 bp TACAATAATCTGTGGGACGGTAGGCTTGGGAGACCTTaGGGGGATCTGTGCGTCTCCAGTCTCTCTCTCGCT +
Preference number: 6 (lower is better)
Translates to: YNNLWDGRLGRP*GDLCVSSLSLA
Trigger: AGCGAGAGAGAGACTGGAGACGCACAGATCCCCCCAAGGTCTCCCAAGCCTACCGTCCCACAGATTATTGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242728.5
ENST00000541271.1
CDS CAA 72 bp CCGGGAGAGGTATTGCAAGACTTCTTTGGCGCATGTTaGAAATCCCGAGTGGAACGCATCCAAGTCGGACTG +
Preference number: 6 (lower is better)
Translates to: PGEVLQDFFGAC*KSRVERIQVGL
Trigger: CAGTCCGACTTGGATGCGTTCCACTCGGGATTTCAAACATGCGCCAAAGAAGTCTTGCAATACCTCTCCCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242728.5
ENST00000394326.2
CDS CAA 72 bp CTCCCTGGGTGTCCAGCTCTCAAACCGGGAGAGGTATaGCAAGACTTCTTTGGCGCATGTTTGAAATCCCGA +
Preference number: 6 (lower is better)
Translates to: LPGCPALKPGEV*QDFFGACLKSR
Trigger: TCGGGATTTCAAACATGCGCCAAAGAAGTCTTGCAATACCTCTCCCGGTTTGAGAGCTGGACACCCAGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242728.5
ENST00000394326.2
CDS CAA 90 bp GCTCTCAAACCGGGAGAGGTATTGCAAGACTTCTTTGGCGCATGTTaGAAATCCCGAGTGGAACGCATCCAAGTCGGACTGAATGGGCGA +
Preference number: 6 (lower is better)
Translates to: ALKPGEVLQDFFGAC*KSRVERIQVGLNGR
Trigger: TCGCCCATTCAGTCCGACTTGGATGCGTTCCACTCGGGATTTCAAACATGCGCCAAAGAAGTCTTGCAATACCTCTCCCGGTTTGAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242728.5
ENST00000394326.2
CDS CCA 72 bp GAAATCCCGAGTGGAACGCATCCAAGTCGGACTGAATaGGCGATTTCAGAGATCGCTCCCCATTCTGTAAAG +
Preference number: 6 (lower is better)
Translates to: EIPSGTHPSRTE*AISEIAPHSVK
Trigger: CTTTACAGAATGGGGAGCGATCTCTGAAATCGCCCATTCAGTCCGACTTGGATGCGTTCCACTCGGGATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242728.5
ENST00000394326.2
CDS CCA 72 bp AGCTCTCAAACCGGGAGAGGTATTGCAAGACTTCTTTaGCGCATGTTTGAAATCCCGAGTGGAACGCATCCA +
Preference number: 6 (lower is better)
Translates to: SSQTGRGIARLL*RMFEIPSGTHP
Trigger: TGGATGCGTTCCACTCGGGATTTCAAACATGCGCCAAAGAAGTCTTGCAATACCTCTCCCGGTTTGAGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242728.5
ENST00000394326.2
CDS CAA 90 bp CCTTCGTCCATGTTCAACTGCTGTTCGTTTCCTCTGTTTCGATTTTaGGGGCTCTGTACAATAATCTGTGGGACGGTAGGCTTGGGAGAC +
Preference number: 6 (lower is better)
Translates to: PSSMFNCCSFPLFRF*GLCTIICGTVGLGD
Trigger: GTCTCCCAAGCCTACCGTCCCACAGATTATTGTACAGAGCCCCAAAAATCGAAACAGAGGAAACGAACAGCAGTTGAACATGGACGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242728.5
ENST00000541271.1
CDS CAA 72 bp ATGTTCAACTGCTGTTCGTTTCCTCTGTTTCGATTTTaGGGGCTCTGTACAATAATCTGTGGGACGGTAGGC +
Preference number: 6 (lower is better)
Translates to: MFNCCSFPLFRF*GLCTIICGTVG
Trigger: GCCTACCGTCCCACAGATTATTGTACAGAGCCCCAAAAATCGAAACAGAGGAAACGAACAGCAGTTGAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242728.5
ENST00000541271.1
CDS TCA 72 bp AGAGATCGCTCCCCATTCTGTAAAGCAATTATCTTCTaGTGCTGTTGCTCGGTTAAGGCGGTTAAAGCTTTT +
Preference number: 6 (lower is better)
Translates to: RDRSPFCKAIIF*CCCSVKAVKAF
Trigger: AAAAGCTTTAACCGCCTTAACCGAGCAACAGCATCAGAAGATAATTGCTTTACAGAATGGGGAGCGATCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242728.5
ENST00000394326.2
CDS CCA 72 bp AGGTATCCTTGGTGTCGTCTCGTTTCATGCTCCTTTTaGGTTTACACATATACAAAGAGGAATAGTCCAGTC +
Preference number: 6 (lower is better)
Translates to: RYPWCRLVSCSF*VYTYTKRNSPV
Trigger: GACTGGACTATTCCTCTTTGTATATGTGTAAACCCAAAAGGAGCATGAAACGAGACGACACCAAGGATACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242728.5
ENST00000541271.1
CDS TCA 72 bp AAATCTCTATGTTCCAGTAACTGTCTCTCTTGCAAATaGGGAATTCCTTCGTCCATGTTCAACTGCTGTTCG +
Preference number: 6 (lower is better)
Translates to: KSLCSSNCLSCK*GIPSSMFNCCS
Trigger: CGAACAGCAGTTGAACATGGACGAAGGAATTCCTCATTTGCAAGAGAGACAGTTACTGGAACATAGAGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242728.5
ENST00000541271.1
CDS TCA 72 bp GTCAATTTCAGATGTTCAGGCAGTAAATCTTTCAGCTaGGCAATGCATTCATTAATTCGGTCTCTTCTTTTC +
Preference number: 6 (lower is better)
Translates to: VNFRCSGSKSFS*AMHSLIRSLLF
Trigger: GAAAAGAAGAGACCGAATTAATGAATGCATTGCTCAGCTGAAAGATTTACTGCCTGAACATCTGAAATTGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242728.5
ENST00000541271.1