RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BHLHE40 (Homo sapiens)

Ensembl gene IDs: ENSG00000134107

Ensembl transcript IDs: ENST00000256495.4, ENST00000460806.1, ENST00000467610.1

Found 208 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCAGACCTGCGGAAACCTCCCCAAACCACTACCGTGCTATGCCAGTaGCTGCTACCTCCCCATGTTAGCAGAAAGCTCGGTCTGACTGCT +
Preference number: 1 (lower is better)
Translates to: ADLRKPPQTTTVLCQ*LLPPHVSRKLGLTA
Trigger: AGCAGTCAGACCGAGCTTTCTGCTAACATGGGGAGGTAGCAGGCACTGGCATAGCACGGTAGTGGTTTGGGGAGGTTTCCGCAGGTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256495.4
3UTR TCA 90 bp GGTCCTAACAGCTGGTTGGGAGCTGAGCCCTGGAAAGCCCTCTTTTaGAAGTACCTTCTGATCAAAGCCACAGACCCAGCTCCCAAACTG +
Preference number: 1 (lower is better)
Translates to: GPNSWLGAEPWKALF*KYLLIKATDPAPKL
Trigger: CAGTTTGGGAGCTGGGTCTGTGGCTTTGATCAGAAGGTACTTTCAAAAGAGGGCTTTCCAGGGCTCAGCTCCCAACCAGCTGTTAGGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256495.4
3UTR GCA 90 bp CCAAAAGGAGCTTTAAAGTCCTATACCAACACGCAGGCACACATGTaGACGCACACGCACATACACACACACACACACACACACACACCC +
Preference number: 1 (lower is better)
Translates to: PKGALKSYTNTQAHM*THTHIHTHTHTHTP
Trigger: GGGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGCGTGTGCGTGCACATGTGTGCCTGCGTGTTGGTATAGGACTTTAAAGCTCCTTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256495.4
3UTR TCA 90 bp TGCACGCACACGCACATACACACACACACACACACACACACACCCTaGATCTGCTCTCCATGCCTCAGATTATCTCAGTATACACAATGC +
Preference number: 1 (lower is better)
Translates to: CTHTHIHTHTHTHTP*ICSPCLRLSQYTQC
Trigger: GCATTGTGTATACTGAGATAATCTGAGGCATGGAGAGCAGATTCAGGGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGCGTGTGCGTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256495.4
3UTR-3UTR CCA 90 bp GGGGAGCAGACCTGCGGAAACCTCCCCAAACCACTACCGTGCTATGCCAGTGCCATAAAGGCAAAAGGGTaGGGTCCTAACAGCTGGTTG +
Preference number: 2 (lower is better)
Translates to: GEQTCGNLPKPLPCYASAIKAKG*GPNSWL
Trigger: CAACCAGCTGTTAGGACCCCACCCTTTTGCCTTTAT...GGCACTGGCATAGCACGGTAGTGGTTTGGGGAGGTTTCCGCAGGTCTGCTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000256495.4
3UTR-3UTR TCA 90 bp GCTTTGTGCACTTTGGGGTGCTCGCTCGGGGTGTCCGCATTTCTCAGACCTTGGATCACTACGAAAGCCTaGGTAGGGAACTACATTCTC +
Preference number: 2 (lower is better)
Translates to: ALCTLGCSLGVSAFLRPWITTKA*VGNYIL
Trigger: GAGAATGTAGTTCCCTACTCAGGCTTTCGTAGTGAT...CCAAGGTCTGAGAAATGCGGACACCCCGAGCGAGCACCCCAAAGTGCACAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256495.4
3UTR-3UTR TCA 90 bp AATAAGGACACTCCATATGCCGTTGGGCAAGAGGAATTAGCCTACAGAAAGGATGCAGAAAGCTCGGTCTaGCTGCTCTCTCTCCCCGAC +
Preference number: 2 (lower is better)
Translates to: NKDTPYAVGQEELAYRKDAESSV*LLSLPD
Trigger: GTCGGGGAGAGAGAGCAGTCAGACCGAGCTTTCTGC...ATCCTTTCTGTAGGCTAATTCCTCTTGCCCAACGGCATATGGAGTGTCCTTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256495.4
3UTR-3UTR GCA 90 bp GAGACGGAATCCTTTTTAGCAATAAGGACACTCCATATGCCGTTGGGCAAGAGGGAAAGGATCTGGCGGTaGCAAGGCTTGGTTAGGCCT +
Preference number: 2 (lower is better)
Translates to: ETESFLAIRTLHMPLGKRERIWR*QGLVRP
Trigger: AGGCCTAACCAAGCCTTGGCACCGCCAGATCCTTTC...CCTCTTGCCCAACGGCATATGGAGTGTCCTTATTGCTAAAAAGGATTCCGTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256495.4
3UTR-3UTR GCA 90 bp AATAAGGACACTCCATATGCCGTTGGGCAAGAGGAATTAGCCTACAGAAAGGATACCACTACCGTGCTATaGCAGTGCCTGCTACCTCCC +
Preference number: 2 (lower is better)
Translates to: NKDTPYAVGQEELAYRKDTTTVL*QCLLPP
Trigger: GGGAGGTAGCAGGCACTGGCATAGCACGGTAGTGGT...ATCCTTTCTGTAGGCTAATTCCTCTTGCCCAACGGCATATGGAGTGTCCTTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256495.4
3UTR-3UTR TCA 90 bp AGGGAACTACATTCTCTTTATTCTTCCGAGGCAGGGGTGGGGAGCAGACCTGCGTGGAAAGCCCTCTTTTaGAAGTACCTTCTGATCAAA +
Preference number: 2 (lower is better)
Translates to: RELHSLYSSEAGVGSRPAWKALF*KYLLIK
Trigger: TTTGATCAGAAGGTACTTTCAAAAGAGGGCTTTCCA...CGCAGGTCTGCTCCCCACCCCTGCCTCGGAAGAATAAAGAGAATGTAGTTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000256495.4
3UTR-3UTR GCA 90 bp AATAAGGACACTCCATATGCCGTTGGGCAAGAGGAATTAGCCTACAGAAAGGATAAAGCTCGGTCTGACTaGTCTCTCTCCCCGACGTCT +
Preference number: 2 (lower is better)
Translates to: NKDTPYAVGQEELAYRKDKARSD*SLSPTS
Trigger: AGACGTCGGGGAGAGAGAGCAGTCAGACCGAGCTTT...ATCCTTTCTGTAGGCTAATTCCTCTTGCCCAACGGCATATGGAGTGTCCTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256495.4
3UTR-3UTR GCA 90 bp AGGGAACTACATTCTCTTTATTCTTCCGAGGCAGGGGTGGGGAGCAGACCTGCGTCTCAGTATACACAATaGAACAATCTTGCAGCATTC +
Preference number: 2 (lower is better)
Translates to: RELHSLYSSEAGVGSRPASQYTQ*NNLAAF
Trigger: GAATGCTGCAAGATTGTTGCATTGTGTATACTGAGA...CGCAGGTCTGCTCCCCACCCCTGCCTCGGAAGAATAAAGAGAATGTAGTTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256495.4
3UTR-3UTR GCA 90 bp AATAAGGACACTCCATATGCCGTTGGGCAAGAGGAATTAGCCTACAGAAAGGATTGCTATGCCAGTGCCTaGTACCTCCCCATGTTAGCA +
Preference number: 2 (lower is better)
Translates to: NKDTPYAVGQEELAYRKDCYASA*YLPMLA
Trigger: TGCTAACATGGGGAGGTAGCAGGCACTGGCATAGCA...ATCCTTTCTGTAGGCTAATTCCTCTTGCCCAACGGCATATGGAGTGTCCTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256495.4
3UTR-3UTR GCA 90 bp GAGACGGAATCCTTTTTAGCAATAAGGACACTCCATATGCCGTTGGGCAAGAGGTTTTACTCAGCTTTGTaGACTTTGGGGTGCTCGCTC +
Preference number: 2 (lower is better)
Translates to: ETESFLAIRTLHMPLGKRFYSAL*TLGCSL
Trigger: GAGCGAGCACCCCAAAGTGCACAAAGCTGAGTAAAA...CCTCTTGCCCAACGGCATATGGAGTGTCCTTATTGCTAAAAAGGATTCCGTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000256495.4
3UTR-3UTR TCA 90 bp AATAAGGACACTCCATATGCCGTTGGGCAAGAGGAATTAGCCTACAGAAAGGATTCAAGCAATCCTTCGTaGCTTCCCTATGCCAAAAGG +
Preference number: 2 (lower is better)
Translates to: NKDTPYAVGQEELAYRKDSSNPS*LPYAKR
Trigger: CCTTTTGGCATAGGGAAGTCACGAAGGATTGCTTGA...ATCCTTTCTGTAGGCTAATTCCTCTTGCCCAACGGCATATGGAGTGTCCTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256495.4
3UTR-3UTR TCA 90 bp AATAAGGACACTCCATATGCCGTTGGGCAAGAGGAATTAGCCTACAGAAAGGATTCCCAAACTGAAGAGTaGCTCACAGACCAAGACTTT +
Preference number: 2 (lower is better)
Translates to: NKDTPYAVGQEELAYRKDSQTEE*LTDQDF
Trigger: AAAGTCTTGGTCTGTGAGTCACTCTTCAGTTTGGGA...ATCCTTTCTGTAGGCTAATTCCTCTTGCCCAACGGCATATGGAGTGTCCTTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256495.4
3UTR-3UTR TCA 90 bp AATAAGGACACTCCATATGCCGTTGGGCAAGAGGAATTAGCCTACAGAAAGGATGAGTCTAGTTCTGTTTaGAGGGGGCAGCTTTTTACT +
Preference number: 2 (lower is better)
Translates to: NKDTPYAVGQEELAYRKDESSSV*RGQLFT
Trigger: AGTAAAAAGCTGCCCCCTTCAAACAGAACTAGACTC...ATCCTTTCTGTAGGCTAATTCCTCTTGCCCAACGGCATATGGAGTGTCCTTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000256495.4
3UTR GCA 72 bp GAGCAGACCTGCGGAAACCTCCCCAAACCACTACCGTaGTATGCCAGTGCCTGCTACCTCCCCATGTTAGCA +
Preference number: 3 (lower is better)
Translates to: EQTCGNLPKPLP*YASACYLPMLA
Trigger: TGCTAACATGGGGAGGTAGCAGGCACTGGCATAGCACGGTAGTGGTTTGGGGAGGTTTCCGCAGGTCTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256495.4
3UTR GCA 72 bp GACCTGCGGAAACCTCCCCAAACCACTACCGTGCTATaGCAGTGCCTGCTACCTCCCCATGTTAGCAGAAAG +
Preference number: 3 (lower is better)
Translates to: DLRKPPQTTTVL*QCLLPPHVSRK
Trigger: CTTTCTGCTAACATGGGGAGGTAGCAGGCACTGGCATAGCACGGTAGTGGTTTGGGGAGGTTTCCGCAGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256495.4
3UTR TCA 72 bp AGCTGGTTGGGAGCTGAGCCCTGGAAAGCCCTCTTTTaGAAGTACCTTCTGATCAAAGCCACAGACCCAGCT +
Preference number: 3 (lower is better)
Translates to: SWLGAEPWKALF*KYLLIKATDPA
Trigger: AGCTGGGTCTGTGGCTTTGATCAGAAGGTACTTTCAAAAGAGGGCTTTCCAGGGCTCAGCTCCCAACCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256495.4
3UTR-3UTR CAA 90 bp AATAAGGACACTCCATATGCCGTTGGGCAAGAGGAATTAGCCTACAGAAAGGATGGTCCTAACAGCTGGTaGGGAGCTGAGCCCTGGAAA +
Preference number: 3 (lower is better)
Translates to: NKDTPYAVGQEELAYRKDGPNSW*GAEPWK
Trigger: TTTCCAGGGCTCAGCTCCCAACCAGCTGTTAGGACC...ATCCTTTCTGTAGGCTAATTCCTCTTGCCCAACGGCATATGGAGTGTCCTTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256495.4
3UTR TCA 72 bp GTTAAAACACGATCAGCAATCAGGCATAGTGCATTTTaGAAAGCTGCTGCGGAGCTGGCTGGACACATCGGG +
Preference number: 3 (lower is better)
Translates to: VKTRSAIRHSAF*KAAAELAGHIG
Trigger: CCCGATGTGTCCAGCCAGCTCCGCAGCAGCTTTTCAAAATGCACTATGCCTGATTGCTGATCGTGTTTTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256495.4
3UTR GCA 72 bp GCTTTAAAGTCCTATACCAACACGCAGGCACACATGTaGACGCACACGCACATACACACACACACACACACA +
Preference number: 3 (lower is better)
Translates to: ALKSYTNTQAHM*THTHIHTHTHT
Trigger: TGTGTGTGTGTGTGTGTGTATGTGCGTGTGCGTGCACATGTGTGCCTGCGTGTTGGTATAGGACTTTAAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256495.4
3UTR-3UTR CAA 90 bp AGGGAACTACATTCTCTTTATTCTTCCGAGGCAGGGGTGGGGAGCAGACCTGCGAAGACTTTGAAGCTTTaGAAAATCCAGCTGATGTGT +
Preference number: 3 (lower is better)
Translates to: RELHSLYSSEAGVGSRPAKTLKL*KIQLMC
Trigger: ACACATCAGCTGGATTTTCAAAAGCTTCAAAGTCTT...CGCAGGTCTGCTCCCCACCCCTGCCTCGGAAGAATAAAGAGAATGTAGTTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000256495.4
3UTR TCA 72 bp ACGCACATACACACACACACACACACACACACACCCTaGATCTGCTCTCCATGCCTCAGATTATCTCAGTAT +
Preference number: 3 (lower is better)
Translates to: THIHTHTHTHTP*ICSPCLRLSQY
Trigger: ATACTGAGATAATCTGAGGCATGGAGAGCAGATTCAGGGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256495.4
3UTR TCA 72 bp TTTCAGTTCCTTAGTAAGCTAATCACTACGAAAGCCTaGGTAGGGAACTACATTCTCTTTATTCTTCCGAGG +
Preference number: 3 (lower is better)
Translates to: FQFLSKLITTKA*VGNYILFILPR
Trigger: CCTCGGAAGAATAAAGAGAATGTAGTTCCCTACTCAGGCTTTCGTAGTGATTAGCTTACTAAGGAACTGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR CCA 90 bp GGGGAGCAGACCTGCGGAAACCTCCCCAAACCACTACCGTGCTATGCCAGTGCCAGTTGGGGGCGTGCATaGCCCGGTGTCCCCGCGGCC +
Preference number: 4 (lower is better)
Translates to: GEQTCGNLPKPLPCYASASWGRA*PGVPAA
Trigger: GGCCGCGGGGACACCGGGCCATGCACGCCCCCAACT...GGCACTGGCATAGCACGGTAGTGGTTTGGGGAGGTTTCCGCAGGTCTGCTCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR CCA 90 bp GCTTTGTGCACTTTGGGGTGCTCGCTCGGGGTGTCCGCATTTCTCAGACCTTGGTGGGGATCCGCTCCATaGCGCGGCGAGCCGGGGCCA +
Preference number: 4 (lower is better)
Translates to: ALCTLGCSLGVSAFLRPWWGSAP*RGEPGP
Trigger: TGGCCCCGGCTCGCCGCGCCATGGAGCGGATCCCCA...CCAAGGTCTGAGAAATGCGGACACCCCGAGCGAGCACCCCAAAGTGCACAAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR GCA 90 bp GGGGAGCAGACCTGCGGAAACCTCCCCAAACCACTACCGTGCTATGCCAGTGCCCTGCGCGCTCCTGTCTaGACTAGCGGAGCGTCTGGA +
Preference number: 4 (lower is better)
Translates to: GEQTCGNLPKPLPCYASALRAPV*TSGASG
Trigger: TCCAGACGCTCCGCTAGTGCAGACAGGAGCGCGCAG...GGCACTGGCATAGCACGGTAGTGGTTTGGGGAGGTTTCCGCAGGTCTGCTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR GCA 90 bp GGGGAGCAGACCTGCGGAAACCTCCCCAAACCACTACCGTGCTATGCCAGTGCCGGTGGGGAGCAGACCTaGGGAAACCTCCCCAAACCA +
Preference number: 4 (lower is better)
Translates to: GEQTCGNLPKPLPCYASAGGEQT*GNLPKP
Trigger: TGGTTTGGGGAGGTTTCCGCAGGTCTGCTCCCCACC...GGCACTGGCATAGCACGGTAGTGGTTTGGGGAGGTTTCCGCAGGTCTGCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR GCA 90 bp AGGGAACTACATTCTCTTTATTCTTCCGAGGCAGGGGTGGGGAGCAGACCTGCGCTTCAGTTGGGGGCGTaGATGGCCCGGTGTCCCCGC +
Preference number: 4 (lower is better)
Translates to: RELHSLYSSEAGVGSRPALQLGA*MARCPR
Trigger: GCGGGGACACCGGGCCATGCACGCCCCCAACTGAAG...CGCAGGTCTGCTCCCCACCCCTGCCTCGGAAGAATAAAGAGAATGTAGTTCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR GCA 90 bp GCTTTGTGCACTTTGGGGTGCTCGCTCGGGGTGTCCGCATTTCTCAGACCTTGGAGCACGGCTGCTCACTaGGCAAGTCGCCCTTCTCCG +
Preference number: 4 (lower is better)
Translates to: ALCTLGCSLGVSAFLRPWSTAAH*ASRPSP
Trigger: CGGAGAAGGGCGACTTGCGCAGTGAGCAGCCGTGCT...CCAAGGTCTGAGAAATGCGGACACCCCGAGCGAGCACCCCAAAGTGCACAAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR GCA 90 bp GGGGAGCAGACCTGCGGAAACCTCCCCAAACCACTACCGTGCTATGCCAGTGCCGAAAGGATCTGGCGGTaGCAAGGCTTGGTTAGGCCT +
Preference number: 4 (lower is better)
Translates to: GEQTCGNLPKPLPCYASAERIWR*QGLVRP
Trigger: AGGCCTAACCAAGCCTTGGCACCGCCAGATCCTTTC...GGCACTGGCATAGCACGGTAGTGGTTTGGGGAGGTTTCCGCAGGTCTGCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR CCA 90 bp GGGGAGCAGACCTGCGGAAACCTCCCCAAACCACTACCGTGCTATGCCAGTGCCGTGAACCTGCGTCCGTaGTCACTTTTGAAGCACGGC +
Preference number: 4 (lower is better)
Translates to: GEQTCGNLPKPLPCYASAVNLRP*SLLKHG
Trigger: GCCGTGCTTCAAAAGTGACCACGGACGCAGGTTCAC...GGCACTGGCATAGCACGGTAGTGGTTTGGGGAGGTTTCCGCAGGTCTGCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR CCA 90 bp AGGGAACTACATTCTCTTTATTCTTCCGAGGCAGGGGTGGGGAGCAGACCTGCGAGGCTGGTGTGGGTGTaGGCCCAGGAACGGGGAGCT +
Preference number: 4 (lower is better)
Translates to: RELHSLYSSEAGVGSRPARLVWV*AQERGA
Trigger: AGCTCCCCGTTCCTGGGCCCACACCCACACCAGCCT...CGCAGGTCTGCTCCCCACCCCTGCCTCGGAAGAATAAAGAGAATGTAGTTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR CCA 90 bp AGGGAACTACATTCTCTTTATTCTTCCGAGGCAGGGGTGGGGAGCAGACCTGCGTCCGAGACCACCCGGTaGAGGTGGGTGACAAGCTGC +
Preference number: 4 (lower is better)
Translates to: RELHSLYSSEAGVGSRPASETTR*RWVTSC
Trigger: GCAGCTTGTCACCCACCTCCACCGGGTGGTCTCGGA...CGCAGGTCTGCTCCCCACCCCTGCCTCGGAAGAATAAAGAGAATGTAGTTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR CCA 90 bp GCTTTGTGCACTTTGGGGTGCTCGCTCGGGGTGTCCGCATTTCTCAGACCTTGGCAGCTTTGTGCACTTTaGGGTGCTCGCTCGGGGTGT +
Preference number: 4 (lower is better)
Translates to: ALCTLGCSLGVSAFLRPWQLCAL*GARSGC
Trigger: ACACCCCGAGCGAGCACCCCAAAGTGCACAAAGCTG...CCAAGGTCTGAGAAATGCGGACACCCCGAGCGAGCACCCCAAAGTGCACAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR GCA 90 bp GCTTTGTGCACTTTGGGGTGCTCGCTCGGGGTGTCCGCATTTCTCAGACCTTGGACCGTGCTATGCCAGTaGCTGCTACCTCCCCATGTT +
Preference number: 4 (lower is better)
Translates to: ALCTLGCSLGVSAFLRPWTVLCQ*LLPPHV
Trigger: AACATGGGGAGGTAGCAGGCACTGGCATAGCACGGT...CCAAGGTCTGAGAAATGCGGACACCCCGAGCGAGCACCCCAAAGTGCACAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR CCA 90 bp GCTTTGTGCACTTTGGGGTGCTCGCTCGGGGTGTCCGCATTTCTCAGACCTTGGTGCTGCGGAGCTGGCTaGACACATCGGGAAAACAAG +
Preference number: 4 (lower is better)
Translates to: ALCTLGCSLGVSAFLRPWCCGAG*THRENK
Trigger: CTTGTTTTCCCGATGTGTCCAGCCAGCTCCGCAGCA...CCAAGGTCTGAGAAATGCGGACACCCCGAGCGAGCACCCCAAAGTGCACAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR TCA 90 bp GGGGAGCAGACCTGCGGAAACCTCCCCAAACCACTACCGTGCTATGCCAGTGCCAGCTGGGTTTTTCCTTaGAGTCCATCACTTTGGGAG +
Preference number: 4 (lower is better)
Translates to: GEQTCGNLPKPLPCYASASWVFP*SPSLWE
Trigger: CTCCCAAAGTGATGGACTTCAAGGAAAAACCCAGCT...GGCACTGGCATAGCACGGTAGTGGTTTGGGGAGGTTTCCGCAGGTCTGCTCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR GCA 90 bp GAGACGGAATCCTTTTTAGCAATAAGGACACTCCATATGCCGTTGGGCAAGAGGGCGGTGTGTGCTCCCTaGGCGGTCTGTCTGCGCCGT +
Preference number: 4 (lower is better)
Translates to: ETESFLAIRTLHMPLGKRAVCAP*AVCLRR
Trigger: ACGGCGCAGACAGACCGCGCAGGGAGCACACACCGC...CCTCTTGCCCAACGGCATATGGAGTGTCCTTATTGCTAAAAAGGATTCCGTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR CCA 90 bp GCTTTGTGCACTTTGGGGTGCTCGCTCGGGGTGTCCGCATTTCTCAGACCTTGGCTCTTTGAAATCCCCTaGGCTGCTGGAATCTTCGGC +
Preference number: 4 (lower is better)
Translates to: ALCTLGCSLGVSAFLRPWLFEIP*AAGIFG
Trigger: GCCGAAGATTCCAGCAGCCCAGGGGATTTCAAAGAG...CCAAGGTCTGAGAAATGCGGACACCCCGAGCGAGCACCCCAAAGTGCACAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR CCA 90 bp GCTTTGTGCACTTTGGGGTGCTCGCTCGGGGTGTCCGCATTTCTCAGACCTTGGGACCTTCCGAACCTTTaGCCGGAGAGCTGGGTTTTT +
Preference number: 4 (lower is better)
Translates to: ALCTLGCSLGVSAFLRPWDLPNL*PESWVF
Trigger: AAAAACCCAGCTCTCCGGCCAAAGGTTCGGAAGGTC...CCAAGGTCTGAGAAATGCGGACACCCCGAGCGAGCACCCCAAAGTGCACAAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR CCA 90 bp AGGGAACTACATTCTCTTTATTCTTCCGAGGCAGGGGTGGGGAGCAGACCTGCGGACGGACGGATGAGCTaGCAAGGGAGAAGGGAGTCT +
Preference number: 4 (lower is better)
Translates to: RELHSLYSSEAGVGSRPADGRMS*QGRRES
Trigger: AGACTCCCTTCTCCCTTGCCAGCTCATCCGTCCGTC...CGCAGGTCTGCTCCCCACCCCTGCCTCGGAAGAATAAAGAGAATGTAGTTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR TCA 90 bp GGGGAGCAGACCTGCGGAAACCTCCCCAAACCACTACCGTGCTATGCCAGTGCCTCCCAAACTGAAGAGTaGCTCACAGACCAAGACTTT +
Preference number: 4 (lower is better)
Translates to: GEQTCGNLPKPLPCYASASQTEE*LTDQDF
Trigger: AAAGTCTTGGTCTGTGAGTCACTCTTCAGTTTGGGA...GGCACTGGCATAGCACGGTAGTGGTTTGGGGAGGTTTCCGCAGGTCTGCTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR GCA 90 bp CTTCGTGACTTCCCTATGCCAAAAGGAGCTTTAAAGTCCTATACCAACACGCAGGTGCTCCAGTCCCGGTaGTTTGGGCAGGCAGGCGGG +
Preference number: 4 (lower is better)
Translates to: LRDFPMPKGALKSYTNTQVLQSR*FGQAGG
Trigger: CCCGCCTGCCTGCCCAAAGCACCGGGACTGGAGCAC...CTGCGTGTTGGTATAGGACTTTAAAGCTCCTTTTGGCATAGGGAAGTCACGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR GCA 90 bp GCTTTGTGCACTTTGGGGTGCTCGCTCGGGGTGTCCGCATTTCTCAGACCTTGGTGCATTTTGAAAAGCTaGTGCGGAGCTGGCTGGACA +
Preference number: 4 (lower is better)
Translates to: ALCTLGCSLGVSAFLRPWCILKS*CGAGWT
Trigger: TGTCCAGCCAGCTCCGCAGCAGCTTTTCAAAATGCA...CCAAGGTCTGAGAAATGCGGACACCCCGAGCGAGCACCCCAAAGTGCACAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR CCA 90 bp CTTCGTGACTTCCCTATGCCAAAAGGAGCTTTAAAGTCCTATACCAACACGCAGTGTCCCCGCGGCCTCTaGCTCCGACTCAGCGCACAG +
Preference number: 4 (lower is better)
Translates to: LRDFPMPKGALKSYTNTQCPRGL*LRLSAQ
Trigger: CTGTGCGCTGAGTCGGAGCCAGAGGCCGCGGGGACA...CTGCGTGTTGGTATAGGACTTTAAAGCTCCTTTTGGCATAGGGAAGTCACGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR CCA 90 bp ACACACACCCTGAATCTGCTCTCCATGCCTCAGATTATCTCAGTATACACAATGGGGGTGGTTGCGCGCTaGGGATCCGCTCCATGGCGC +
Preference number: 4 (lower is better)
Translates to: THTLNLLSMPQIISVYTMGVVAR*GSAPWR
Trigger: GCGCCATGGAGCGGATCCCCAGCGCGCAACCACCCC...CATTGTGTATACTGAGATAATCTGAGGCATGGAGAGCAGATTCAGGGTGTGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR CCA 90 bp AGGGAACTACATTCTCTTTATTCTTCCGAGGCAGGGGTGGGGAGCAGACCTGCGGCACTGGCACTGAGGTaGGATACCAGCACTTCTCCA +
Preference number: 4 (lower is better)
Translates to: RELHSLYSSEAGVGSRPAALALR*DTSTSP
Trigger: TGGAGAAGTGCTGGTATCCCACCTCAGTGCCAGTGC...CGCAGGTCTGCTCCCCACCCCTGCCTCGGAAGAATAAAGAGAATGTAGTTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR CCA 90 bp AGGGAACTACATTCTCTTTATTCTTCCGAGGCAGGGGTGGGGAGCAGACCTGCGGGGCTATTCTCTGGGTaGGGAAAAGCCCAGACGTCT +
Preference number: 4 (lower is better)
Translates to: RELHSLYSSEAGVGSRPAGLFSG*GKAQTS
Trigger: AGACGTCTGGGCTTTTCCCCACCCAGAGAATAGCCC...CGCAGGTCTGCTCCCCACCCCTGCCTCGGAAGAATAAAGAGAATGTAGTTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR CCA 90 bp GGGGAGCAGACCTGCGGAAACCTCCCCAAACCACTACCGTGCTATGCCAGTGCCCAAGAAAGAAGGACATaGGAGTCAGCCATATCACAC +
Preference number: 4 (lower is better)
Translates to: GEQTCGNLPKPLPCYASAQERRT*ESAISH
Trigger: GTGTGATATGGCTGACTCCCATGTCCTTCTTTCTTG...GGCACTGGCATAGCACGGTAGTGGTTTGGGGAGGTTTCCGCAGGTCTGCTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR TCA 90 bp AGGGAACTACATTCTCTTTATTCTTCCGAGGCAGGGGTGGGGAGCAGACCTGCGACCCAGCTCCCAAACTaGAGAGTGACTCACAGACCA +
Preference number: 4 (lower is better)
Translates to: RELHSLYSSEAGVGSRPATQLPN*RVTHRP
Trigger: TGGTCTGTGAGTCACTCTTCAGTTTGGGAGCTGGGT...CGCAGGTCTGCTCCCCACCCCTGCCTCGGAAGAATAAAGAGAATGTAGTTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR GCA 90 bp GAGACGGAATCCTTTTTAGCAATAAGGACACTCCATATGCCGTTGGGCAAGAGGCGTCTGGATGAGGACTaGCCTGGAGAGGGCTTCGGG +
Preference number: 4 (lower is better)
Translates to: ETESFLAIRTLHMPLGKRRLDED*PGEGFG
Trigger: CCCGAAGCCCTCTCCAGGGCAGTCCTCATCCAGACG...CCTCTTGCCCAACGGCATATGGAGTGTCCTTATTGCTAAAAAGGATTCCGTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR GCA 90 bp GAGACGGAATCCTTTTTAGCAATAAGGACACTCCATATGCCGTTGGGCAAGAGGCTGGAGGTACCACCCTaGAGCAGCTCCGAGACCACC +
Preference number: 4 (lower is better)
Translates to: ETESFLAIRTLHMPLGKRLEVPP*SSSETT
Trigger: GGTGGTCTCGGAGCTGCTGCAGGGTGGTACCTCCAG...CCTCTTGCCCAACGGCATATGGAGTGTCCTTATTGCTAAAAAGGATTCCGTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR GCA 90 bp GCTTTGTGCACTTTGGGGTGCTCGCTCGGGGTGTCCGCATTTCTCAGACCTTGGATTTTGAAAAGCTGCTaGGGAGCTGGCTGGACACAT +
Preference number: 4 (lower is better)
Translates to: ALCTLGCSLGVSAFLRPWILKSC*GAGWTH
Trigger: ATGTGTCCAGCCAGCTCCGCAGCAGCTTTTCAAAAT...CCAAGGTCTGAGAAATGCGGACACCCCGAGCGAGCACCCCAAAGTGCACAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR TCA 90 bp ACACACACCCTGAATCTGCTCTCCATGCCTCAGATTATCTCAGTATACACAATGAGCGGAGCGTCTGGATaGGGACTGCCCTGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: THTLNLLSMPQIISVYTMSGASG*GLPWRG
Trigger: CCCTCTCCAGGGCAGTCCTCATCCAGACGCTCCGCT...CATTGTGTATACTGAGATAATCTGAGGCATGGAGAGCAGATTCAGGGTGTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR TCA 90 bp GGGGAGCAGACCTGCGGAAACCTCCCCAAACCACTACCGTGCTATGCCAGTGCCACTGCTTTTTCCAAGTaGCCCAAAGTTGTAAGTTTG +
Preference number: 4 (lower is better)
Translates to: GEQTCGNLPKPLPCYASATAFSK*PKVVSL
Trigger: CAAACTTACAACTTTGGGTCACTTGGAAAAAGCAGT...GGCACTGGCATAGCACGGTAGTGGTTTGGGGAGGTTTCCGCAGGTCTGCTCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR TCA 90 bp GCTTTGTGCACTTTGGGGTGCTCGCTCGGGGTGTCCGCATTTCTCAGACCTTGGGAGTCTAGTTCTGTTTaGAGGGGGCAGCTTTTTACT +
Preference number: 4 (lower is better)
Translates to: ALCTLGCSLGVSAFLRPWESSSV*RGQLFT
Trigger: AGTAAAAAGCTGCCCCCTTCAAACAGAACTAGACTC...CCAAGGTCTGAGAAATGCGGACACCCCGAGCGAGCACCCCAAAGTGCACAAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR GCA 90 bp CTTCGTGACTTCCCTATGCCAAAAGGAGCTTTAAAGTCCTATACCAACACGCAGCAGACTGGCGGTGTGTaGTCCCTGCGCGGTCTGTCT +
Preference number: 4 (lower is better)
Translates to: LRDFPMPKGALKSYTNTQQTGGV*SLRGLS
Trigger: AGACAGACCGCGCAGGGAGCACACACCGCCAGTCTG...CTGCGTGTTGGTATAGGACTTTAAAGCTCCTTTTGGCATAGGGAAGTCACGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR GCA 90 bp TGTCAAGCAATCCTTCGTGACTTCCCTATGCCAAAAGGAGCTTTAAAGTCCTATGCGAGCCGGGGCCACTaGGCGCTCCTGTCTGCACTA +
Preference number: 4 (lower is better)
Translates to: CQAILRDFPMPKGALKSYASRGH*ALLSAL
Trigger: TAGTGCAGACAGGAGCGCGCAGTGGCCCCGGCTCGC...ATAGGACTTTAAAGCTCCTTTTGGCATAGGGAAGTCACGAAGGATTGCTTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR GCA 90 bp GAGACGGAATCCTTTTTAGCAATAAGGACACTCCATATGCCGTTGGGCAAGAGGTTGTGCACTTTGGGGTaGTCGCTCGGGGTGTCCGCA +
Preference number: 4 (lower is better)
Translates to: ETESFLAIRTLHMPLGKRLCTLG*SLGVSA
Trigger: TGCGGACACCCCGAGCGAGCACCCCAAAGTGCACAA...CCTCTTGCCCAACGGCATATGGAGTGTCCTTATTGCTAAAAAGGATTCCGTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR CCA 90 bp AGGGAACTACATTCTCTTTATTCTTCCGAGGCAGGGGTGGGGAGCAGACCTGCGTACACTTGGTACATGTaGGCAGGGTACATCCCTGGT +
Preference number: 4 (lower is better)
Translates to: RELHSLYSSEAGVGSRPAYTWYM*AGYIPG
Trigger: ACCAGGGATGTACCCTGCCCACATGTACCAAGTGTA...CGCAGGTCTGCTCCCCACCCCTGCCTCGGAAGAATAAAGAGAATGTAGTTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR CCA 90 bp GCTTTGTGCACTTTGGGGTGCTCGCTCGGGGTGTCCGCATTTCTCAGACCTTGGTCACTGCTAGTGAAATaGCCTTCATCATCCGAAAGC +
Preference number: 4 (lower is better)
Translates to: ALCTLGCSLGVSAFLRPWSLLVK*PSSSES
Trigger: GCTTTCGGATGATGAAGGCCATTTCACTAGCAGTGA...CCAAGGTCTGAGAAATGCGGACACCCCGAGCGAGCACCCCAAAGTGCACAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR CCA 90 bp GAGACGGAATCCTTTTTAGCAATAAGGACACTCCATATGCCGTTGGGCAAGAGGGGAGAAGGGAGTCTCTaGGGCATGAGCAAGGGAGCC +
Preference number: 4 (lower is better)
Translates to: ETESFLAIRTLHMPLGKRGEGSL*GMSKGA
Trigger: GGCTCCCTTGCTCATGCCCCAGAGACTCCCTTCTCC...CCTCTTGCCCAACGGCATATGGAGTGTCCTTATTGCTAAAAAGGATTCCGTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR TCA 90 bp CTTCGTGACTTCCCTATGCCAAAAGGAGCTTTAAAGTCCTATACCAACACGCAGCCCGGTGGAGGTGGGTaGCAAGCTGCGAAGACTTCA +
Preference number: 4 (lower is better)
Translates to: LRDFPMPKGALKSYTNTQPGGGG*QAAKTS
Trigger: TGAAGTCTTCGCAGCTTGTCACCCACCTCCACCGGG...CTGCGTGTTGGTATAGGACTTTAAAGCTCCTTTTGGCATAGGGAAGTCACGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR TCA 90 bp CTTCGTGACTTCCCTATGCCAAAAGGAGCTTTAAAGTCCTATACCAACACGCAGTGCTCCCCACTCGAGTaGGCGAAAGTCCGCTGGATG +
Preference number: 4 (lower is better)
Translates to: LRDFPMPKGALKSYTNTQCSPLE*AKVRWM
Trigger: CATCCAGCGGACTTTCGCTCACTCGAGTGGGGAGCA...CTGCGTGTTGGTATAGGACTTTAAAGCTCCTTTTGGCATAGGGAAGTCACGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR TCA 90 bp ACACACACCCTGAATCTGCTCTCCATGCCTCAGATTATCTCAGTATACACAATGCTGCGGCAGAGGCGTTaGGGCCTGGGTATAGCACTG +
Preference number: 4 (lower is better)
Translates to: THTLNLLSMPQIISVYTMLRQRR*GLGIAL
Trigger: CAGTGCTATACCCAGGCCTCAACGCCTCTGCCGCAG...CATTGTGTATACTGAGATAATCTGAGGCATGGAGAGCAGATTCAGGGTGTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR TCA 90 bp CTTCGTGACTTCCCTATGCCAAAAGGAGCTTTAAAGTCCTATACCAACACGCAGGCAGAAAGCTCGGTCTaGCTGCTCTCTCTCCCCGAC +
Preference number: 4 (lower is better)
Translates to: LRDFPMPKGALKSYTNTQAESSV*LLSLPD
Trigger: GTCGGGGAGAGAGAGCAGTCAGACCGAGCTTTCTGC...CTGCGTGTTGGTATAGGACTTTAAAGCTCCTTTTGGCATAGGGAAGTCACGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR TCA 90 bp GGGGAGCAGACCTGCGGAAACCTCCCCAAACCACTACCGTGCTATGCCAGTGCCGTTTTAGGATGGAATTaGAAACTGAGTCTAGTTCTG +
Preference number: 4 (lower is better)
Translates to: GEQTCGNLPKPLPCYASAVLGWN*KLSLVL
Trigger: CAGAACTAGACTCAGTTTTCAATTCCATCCTAAAAC...GGCACTGGCATAGCACGGTAGTGGTTTGGGGAGGTTTCCGCAGGTCTGCTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR GCA 90 bp GGGGAGCAGACCTGCGGAAACCTCCCCAAACCACTACCGTGCTATGCCAGTGCCGTTAGTGCTTTCACATaGTTCAAGGTAAGTTCAAGA +
Preference number: 4 (lower is better)
Translates to: GEQTCGNLPKPLPCYASAVSAFT*FKVSSR
Trigger: TCTTGAACTTACCTTGAAGCATGTGAAAGCACTAAC...GGCACTGGCATAGCACGGTAGTGGTTTGGGGAGGTTTCCGCAGGTCTGCTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR GCA 90 bp TGTCAAGCAATCCTTCGTGACTTCCCTATGCCAAAAGGAGCTTTAAAGTCCTATCTGTGTCCGTGTCGCTaGCGCTCTGCTCCCCACTCG +
Preference number: 4 (lower is better)
Translates to: CQAILRDFPMPKGALKSYLCPCR*RSAPHS
Trigger: CGAGTGGGGAGCAGAGCGGCAGCGACACGGACACAG...ATAGGACTTTAAAGCTCCTTTTGGCATAGGGAAGTCACGAAGGATTGCTTGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR CCA 90 bp CTTCGTGACTTCCCTATGCCAAAAGGAGCTTTAAAGTCCTATACCAACACGCAGTGGGGTCCTAACAGCTaGTTGGGAGCTGAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: LRDFPMPKGALKSYTNTQWGPNS*LGAEPW
Trigger: CCAGGGCTCAGCTCCCAACCAGCTGTTAGGACCCCA...CTGCGTGTTGGTATAGGACTTTAAAGCTCCTTTTGGCATAGGGAAGTCACGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR CCA 90 bp AGGGAACTACATTCTCTTTATTCTTCCGAGGCAGGGGTGGGGAGCAGACCTGCGGCATTTCTCAGACCTTaGTTTGGTTCCCTGCACAGT +
Preference number: 4 (lower is better)
Translates to: RELHSLYSSEAGVGSRPAAFLRP*FGSLHS
Trigger: ACTGTGCAGGGAACCAAACCAAGGTCTGAGAAATGC...CGCAGGTCTGCTCCCCACCCCTGCCTCGGAAGAATAAAGAGAATGTAGTTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR CCA 90 bp AGGGAACTACATTCTCTTTATTCTTCCGAGGCAGGGGTGGGGAGCAGACCTGCGCACTCCATATGCCGTTaGGCAAGAGGAATTAGCCTA +
Preference number: 4 (lower is better)
Translates to: RELHSLYSSEAGVGSRPAHSICR*ARGISL
Trigger: TAGGCTAATTCCTCTTGCCCAACGGCATATGGAGTG...CGCAGGTCTGCTCCCCACCCCTGCCTCGGAAGAATAAAGAGAATGTAGTTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR TCA 90 bp CTTCGTGACTTCCCTATGCCAAAAGGAGCTTTAAAGTCCTATACCAACACGCAGTTTGGGAGCTGGGTCTaGTGGCTTCCTGGAGGTACC +
Preference number: 4 (lower is better)
Translates to: LRDFPMPKGALKSYTNTQFGSWV*WLPGGT
Trigger: GGTACCTCCAGGAAGCCATCAGACCCAGCTCCCAAA...CTGCGTGTTGGTATAGGACTTTAAAGCTCCTTTTGGCATAGGGAAGTCACGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR TCA 90 bp CTTCGTGACTTCCCTATGCCAAAAGGAGCTTTAAAGTCCTATACCAACACGCAGTCCTTTCTCCCATCGTaGACCTGCGTCCGTGGTCAC +
Preference number: 4 (lower is better)
Translates to: LRDFPMPKGALKSYTNTQSFLPS*TCVRGH
Trigger: GTGACCACGGACGCAGGTTCACGATGGGAGAAAGGA...CTGCGTGTTGGTATAGGACTTTAAAGCTCCTTTTGGCATAGGGAAGTCACGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR TCA 90 bp ACACACACCCTGAATCTGCTCTCCATGCCTCAGATTATCTCAGTATACACAATGGGAGTCTCTGGGGCATaGGCAAGGGAGCCGAGATCT +
Preference number: 4 (lower is better)
Translates to: THTLNLLSMPQIISVYTMGVSGA*AREPRS
Trigger: AGATCTCGGCTCCCTTGCTCATGCCCCAGAGACTCC...CATTGTGTATACTGAGATAATCTGAGGCATGGAGAGCAGATTCAGGGTGTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR TCA 90 bp TGTCAAGCAATCCTTCGTGACTTCCCTATGCCAAAAGGAGCTTTAAAGTCCTATGAGTCGACGGACGGATaGGCTGGCAAGGGAGAAGGG +
Preference number: 4 (lower is better)
Translates to: CQAILRDFPMPKGALKSYESTDG*AGKGEG
Trigger: CCCTTCTCCCTTGCCAGCTCATCCGTCCGTCGACTC...ATAGGACTTTAAAGCTCCTTTTGGCATAGGGAAGTCACGAAGGATTGCTTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR TCA 90 bp AATAAGGACACTCCATATGCCGTTGGGCAAGAGGAATTAGCCTACAGAAAGGATCAGCTGGTTGGGAGCTaGGCCCTGGAAAGCCCTCTT +
Preference number: 4 (lower is better)
Translates to: NKDTPYAVGQEELAYRKDQLVGS*ALESPL
Trigger: AAGAGGGCTTTCCAGGGCTCAGCTCCCAACCAGCTG...ATCCTTTCTGTAGGCTAATTCCTCTTGCCCAACGGCATATGGAGTGTCCTTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR TCA 90 bp GAGACGGAATCCTTTTTAGCAATAAGGACACTCCATATGCCGTTGGGCAAGAGGCTCCCCGACGTCTGGTaGGTCACGTCGACAATAAAG +
Preference number: 4 (lower is better)
Translates to: ETESFLAIRTLHMPLGKRLPDVW*VTSTIK
Trigger: CTTTATTGTCGACGTGACTCACCAGACGTCGGGGAG...CCTCTTGCCCAACGGCATATGGAGTGTCCTTATTGCTAAAAAGGATTCCGTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR GCA 90 bp AATAAGGACACTCCATATGCCGTTGGGCAAGAGGAATTAGCCTACAGAAAGGATCCTGGTAGGTCTCCGTaGTCCAGTCCCGGTGCTTTG +
Preference number: 4 (lower is better)
Translates to: NKDTPYAVGQEELAYRKDPGRSP*SSPGAL
Trigger: CAAAGCACCGGGACTGGAGCACGGAGACCTACCAGG...ATCCTTTCTGTAGGCTAATTCCTCTTGCCCAACGGCATATGGAGTGTCCTTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR GCA 90 bp CTTCGTGACTTCCCTATGCCAAAAGGAGCTTTAAAGTCCTATACCAACACGCAGACCACTACCGTGCTATaGCAGTGCCTGCTACCTCCC +
Preference number: 4 (lower is better)
Translates to: LRDFPMPKGALKSYTNTQTTTVL*QCLLPP
Trigger: GGGAGGTAGCAGGCACTGGCATAGCACGGTAGTGGT...CTGCGTGTTGGTATAGGACTTTAAAGCTCCTTTTGGCATAGGGAAGTCACGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR CCA 90 bp AATAAGGACACTCCATATGCCGTTGGGCAAGAGGAATTAGCCTACAGAAAGGATAGATGCAGCTTCAGTTaGGGGCGTGCATGGCCCGGT +
Preference number: 4 (lower is better)
Translates to: NKDTPYAVGQEELAYRKDRCSFS*GRAWPG
Trigger: ACCGGGCCATGCACGCCCCCAACTGAAGCTGCATCT...ATCCTTTCTGTAGGCTAATTCCTCTTGCCCAACGGCATATGGAGTGTCCTTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR CCA 90 bp AATAAGGACACTCCATATGCCGTTGGGCAAGAGGAATTAGCCTACAGAAAGGATACCACCCGGTGGAGGTaGGTGACAAGCTGCGAAGAC +
Preference number: 4 (lower is better)
Translates to: NKDTPYAVGQEELAYRKDTTRWR*VTSCED
Trigger: GTCTTCGCAGCTTGTCACCCACCTCCACCGGGTGGT...ATCCTTTCTGTAGGCTAATTCCTCTTGCCCAACGGCATATGGAGTGTCCTTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR CCA 90 bp GAGACGGAATCCTTTTTAGCAATAAGGACACTCCATATGCCGTTGGGCAAGAGGAGTCCGCTGGATGACTaGCACGCAGTTTTTCCCAGG +
Preference number: 4 (lower is better)
Translates to: ETESFLAIRTLHMPLGKRSPLDD*HAVFPR
Trigger: CCTGGGAAAAACTGCGTGCCAGTCATCCAGCGGACT...CCTCTTGCCCAACGGCATATGGAGTGTCCTTATTGCTAAAAAGGATTCCGTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR TCA 90 bp AATAAGGACACTCCATATGCCGTTGGGCAAGAGGAATTAGCCTACAGAAAGGATTGCTTGGCCAGATACTaGAGCACCTCCCGGGCACAT +
Preference number: 4 (lower is better)
Translates to: NKDTPYAVGQEELAYRKDCLARY*STSRAH
Trigger: ATGTGCCCGGGAGGTGCTTCAGTATCTGGCCAAGCA...ATCCTTTCTGTAGGCTAATTCCTCTTGCCCAACGGCATATGGAGTGTCCTTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR TCA 90 bp ACACACACCCTGAATCTGCTCTCCATGCCTCAGATTATCTCAGTATACACAATGGTCCGTGGTCACTTTTaGAGCACGGCTGCTCACTGC +
Preference number: 4 (lower is better)
Translates to: THTLNLLSMPQIISVYTMVRGHF*STAAHC
Trigger: GCAGTGAGCAGCCGTGCTTCAAAAGTGACCACGGAC...CATTGTGTATACTGAGATAATCTGAGGCATGGAGAGCAGATTCAGGGTGTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR GCA 90 bp ACACACACCCTGAATCTGCTCTCCATGCCTCAGATTATCTCAGTATACACAATGCTTTTGAAGCACGGCTaGTCACTGCGCAAGTCGCCC +
Preference number: 4 (lower is better)
Translates to: THTLNLLSMPQIISVYTMLLKHG*SLRKSP
Trigger: GGGCGACTTGCGCAGTGAGCAGCCGTGCTTCAAAAG...CATTGTGTATACTGAGATAATCTGAGGCATGGAGAGCAGATTCAGGGTGTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR GCA 90 bp CTTCGTGACTTCCCTATGCCAAAAGGAGCTTTAAAGTCCTATACCAACACGCAGAAAGCTCGGTCTGACTaGTCTCTCTCCCCGACGTCT +
Preference number: 4 (lower is better)
Translates to: LRDFPMPKGALKSYTNTQKARSD*SLSPTS
Trigger: AGACGTCGGGGAGAGAGAGCAGTCAGACCGAGCTTT...CTGCGTGTTGGTATAGGACTTTAAAGCTCCTTTTGGCATAGGGAAGTCACGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR CCA 90 bp ACACACACCCTGAATCTGCTCTCCATGCCTCAGATTATCTCAGTATACACAATGAGCACTTCTCCAGCATaGGCAGGTAGGCAGTCGCTG +
Preference number: 4 (lower is better)
Translates to: THTLNLLSMPQIISVYTMSTSPA*AGRQSL
Trigger: CAGCGACTGCCTACCTGCCCATGCTGGAGAAGTGCT...CATTGTGTATACTGAGATAATCTGAGGCATGGAGAGCAGATTCAGGGTGTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR TCA 90 bp GAGACGGAATCCTTTTTAGCAATAAGGACACTCCATATGCCGTTGGGCAAGAGGGTCTCTTTTTCTCGATaGGCCGGTGCGGCAATTTGT +
Preference number: 4 (lower is better)
Translates to: ETESFLAIRTLHMPLGKRVSFSR*AGAAIC
Trigger: ACAAATTGCCGCACCGGCTCATCGAGAAAAAGAGAC...CCTCTTGCCCAACGGCATATGGAGTGTCCTTATTGCTAAAAAGGATTCCGTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR TCA 90 bp AATAAGGACACTCCATATGCCGTTGGGCAAGAGGAATTAGCCTACAGAAAGGATCGAAAGTCCGCTGGATaGCTGGCACGCAGTTTTTCC +
Preference number: 4 (lower is better)
Translates to: NKDTPYAVGQEELAYRKDRKSAG*LARSFS
Trigger: GGAAAAACTGCGTGCCAGTCATCCAGCGGACTTTCG...ATCCTTTCTGTAGGCTAATTCCTCTTGCCCAACGGCATATGGAGTGTCCTTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR GCA 90 bp CTTCGTGACTTCCCTATGCCAAAAGGAGCTTTAAAGTCCTATACCAACACGCAGTGCTATGCCAGTGCCTaGTACCTCCCCATGTTAGCA +
Preference number: 4 (lower is better)
Translates to: LRDFPMPKGALKSYTNTQCYASA*YLPMLA
Trigger: TGCTAACATGGGGAGGTAGCAGGCACTGGCATAGCA...CTGCGTGTTGGTATAGGACTTTAAAGCTCCTTTTGGCATAGGGAAGTCACGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR GCA 90 bp ACACACACCCTGAATCTGCTCTCCATGCCTCAGATTATCTCAGTATACACAATGAGGCCTAGAAACAGGTaGCAGAAGCCCAGGGAACTC +
Preference number: 4 (lower is better)
Translates to: THTLNLLSMPQIISVYTMRPRNR*QKPREL
Trigger: GAGTTCCCTGGGCTTCTGGCACCTGTTTCTAGGCCT...CATTGTGTATACTGAGATAATCTGAGGCATGGAGAGCAGATTCAGGGTGTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR CCA 90 bp CTTCGTGACTTCCCTATGCCAAAAGGAGCTTTAAAGTCCTATACCAACACGCAGTCCCGGGCACATGTCTaGAAACCTGAGCAGAACATC +
Preference number: 4 (lower is better)
Translates to: LRDFPMPKGALKSYTNTQSRAHV*KPEQNI
Trigger: GATGTTCTGCTCAGGTTTCCAGACATGTGCCCGGGA...CTGCGTGTTGGTATAGGACTTTAAAGCTCCTTTTGGCATAGGGAAGTCACGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR CCA 90 bp CTTCGTGACTTCCCTATGCCAAAAGGAGCTTTAAAGTCCTATACCAACACGCAGCCTACAGAAAGGATCTaGCGGTGCCAAGGCTTGGTT +
Preference number: 4 (lower is better)
Translates to: LRDFPMPKGALKSYTNTQPTERI*RCQGLV
Trigger: AACCAAGCCTTGGCACCGCCAGATCCTTTCTGTAGG...CTGCGTGTTGGTATAGGACTTTAAAGCTCCTTTTGGCATAGGGAAGTCACGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR TCA 90 bp GAGACGGAATCCTTTTTAGCAATAAGGACACTCCATATGCCGTTGGGCAAGAGGACATGTCTGGAAACCTaGGCAGAACATCTCTTGACC +
Preference number: 4 (lower is better)
Translates to: ETESFLAIRTLHMPLGKRTCLET*AEHLLT
Trigger: GGTCAAGAGATGTTCTGCTCAGGTTTCCAGACATGT...CCTCTTGCCCAACGGCATATGGAGTGTCCTTATTGCTAAAAAGGATTCCGTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR GCA 90 bp ACACACACCCTGAATCTGCTCTCCATGCCTCAGATTATCTCAGTATACACAATGTCTTCGGCTTTGAGATaGAGCTTCAGTTGGGGGCGT +
Preference number: 4 (lower is better)
Translates to: THTLNLLSMPQIISVYTMSSALR*SFSWGR
Trigger: ACGCCCCCAACTGAAGCTGCATCTCAAAGCCGAAGA...CATTGTGTATACTGAGATAATCTGAGGCATGGAGAGCAGATTCAGGGTGTGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR GCA 90 bp GAGACGGAATCCTTTTTAGCAATAAGGACACTCCATATGCCGTTGGGCAAGAGGATTTGTAGGTCTCCTTaGTGTCCTCGCTCCGCTTTA +
Preference number: 4 (lower is better)
Translates to: ETESFLAIRTLHMPLGKRICRSP*CPRSAL
Trigger: TAAAGCGGAGCGAGGACAGCAAGGAGACCTACAAAT...CCTCTTGCCCAACGGCATATGGAGTGTCCTTATTGCTAAAAAGGATTCCGTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR GCA 90 bp TGTCAAGCAATCCTTCGTGACTTCCCTATGCCAAAAGGAGCTTTAAAGTCCTATCCCAAACCACTACCGTaGTATGCCAGTGCCTGCTAC +
Preference number: 4 (lower is better)
Translates to: CQAILRDFPMPKGALKSYPKPLP*YASACY
Trigger: GTAGCAGGCACTGGCATAGCACGGTAGTGGTTTGGG...ATAGGACTTTAAAGCTCCTTTTGGCATAGGGAAGTCACGAAGGATTGCTTGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR CCA 90 bp CTTCGTGACTTCCCTATGCCAAAAGGAGCTTTAAAGTCCTATACCAACACGCAGGAGTGTTCTCGTGCTTaGCCAGATACTGAAGCACCT +
Preference number: 4 (lower is better)
Translates to: LRDFPMPKGALKSYTNTQECSRA*PDTEAP
Trigger: AGGTGCTTCAGTATCTGGCCAAGCACGAGAACACTC...CTGCGTGTTGGTATAGGACTTTAAAGCTCCTTTTGGCATAGGGAAGTCACGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR CCA 90 bp GAGACGGAATCCTTTTTAGCAATAAGGACACTCCATATGCCGTTGGGCAAGAGGAGCCGAGATCTTGTCTaGGTTCATGAAGCTAGAGAG +
Preference number: 4 (lower is better)
Translates to: ETESFLAIRTLHMPLGKRSRDLV*VHEARE
Trigger: CTCTCTAGCTTCATGAACCCAGACAAGATCTCGGCT...CCTCTTGCCCAACGGCATATGGAGTGTCCTTATTGCTAAAAAGGATTCCGTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR TCA 90 bp AATAAGGACACTCCATATGCCGTTGGGCAAGAGGAATTAGCCTACAGAAAGGATTGGAATCTTCGGCTTTaGGATGCAGCTTCAGTTGGG +
Preference number: 4 (lower is better)
Translates to: NKDTPYAVGQEELAYRKDWNLRL*DAASVG
Trigger: CCCAACTGAAGCTGCATCTCAAAGCCGAAGATTCCA...ATCCTTTCTGTAGGCTAATTCCTCTTGCCCAACGGCATATGGAGTGTCCTTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR TCA 90 bp ACACACACCCTGAATCTGCTCTCCATGCCTCAGATTATCTCAGTATACACAATGCACTCTGCAGGGCAATaGTTTTCTGCTGCTGCTGAT +
Preference number: 4 (lower is better)
Translates to: THTLNLLSMPQIISVYTMHSAGQ*FSAAAD
Trigger: ATCAGCAGCAGCAGAAAATCATTGCCCTGCAGAGTG...CATTGTGTATACTGAGATAATCTGAGGCATGGAGAGCAGATTCAGGGTGTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR TCA 90 bp GAGACGGAATCCTTTTTAGCAATAAGGACACTCCATATGCCGTTGGGCAAGAGGGAGCAGAACATCTCTTaGCCTGTTTCGACATTTCTC +
Preference number: 4 (lower is better)
Translates to: ETESFLAIRTLHMPLGKREQNIS*PVSTFL
Trigger: GAGAAATGTCGAAACAGGTCAAGAGATGTTCTGCTC...CCTCTTGCCCAACGGCATATGGAGTGTCCTTATTGCTAAAAAGGATTCCGTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR TCA 90 bp ACACACACCCTGAATCTGCTCTCCATGCCTCAGATTATCTCAGTATACACAATGAGGCATAGTGCATTTTaGAAAGCTGCTGCGGAGCTG +
Preference number: 4 (lower is better)
Translates to: THTLNLLSMPQIISVYTMRHSAF*KAAAEL
Trigger: CAGCTCCGCAGCAGCTTTTCAAAATGCACTATGCCT...CATTGTGTATACTGAGATAATCTGAGGCATGGAGAGCAGATTCAGGGTGTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR CCA 90 bp AATAAGGACACTCCATATGCCGTTGGGCAAGAGGAATTAGCCTACAGAAAGGATAGGAGATCCTTCAGCTaGGCGATGCACTCGTTAATC +
Preference number: 4 (lower is better)
Translates to: NKDTPYAVGQEELAYRKDRRSFS*AMHSLI
Trigger: GATTAACGAGTGCATCGCCCAGCTGAAGGATCTCCT...ATCCTTTCTGTAGGCTAATTCCTCTTGCCCAACGGCATATGGAGTGTCCTTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR TCA 90 bp ACACACACCCTGAATCTGCTCTCCATGCCTCAGATTATCTCAGTATACACAATGTCAAGCAATCCTTCGTaGCTTCCCTATGCCAAAAGG +
Preference number: 4 (lower is better)
Translates to: THTLNLLSMPQIISVYTMSSNPS*LPYAKR
Trigger: CCTTTTGGCATAGGGAAGTCACGAAGGATTGCTTGA...CATTGTGTATACTGAGATAATCTGAGGCATGGAGAGCAGATTCAGGGTGTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR TCA 90 bp CTTCGTGACTTCCCTATGCCAAAAGGAGCTTTAAAGTCCTATACCAACACGCAGATCACTACGAAAGCCTaGGTAGGGAACTACATTCTC +
Preference number: 4 (lower is better)
Translates to: LRDFPMPKGALKSYTNTQITTKA*VGNYIL
Trigger: GAGAATGTAGTTCCCTACTCAGGCTTTCGTAGTGAT...CTGCGTGTTGGTATAGGACTTTAAAGCTCCTTTTGGCATAGGGAAGTCACGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR GCA 90 bp ACACACACCCTGAATCTGCTCTCCATGCCTCAGATTATCTCAGTATACACAATGGGACTCTTGCTTAATTaGGCCGATCCTTTCTCCCAT +
Preference number: 4 (lower is better)
Translates to: THTLNLLSMPQIISVYTMGLLLN*ADPFSH
Trigger: ATGGGAGAAAGGATCGGCGCAATTAAGCAAGAGTCC...CATTGTGTATACTGAGATAATCTGAGGCATGGAGAGCAGATTCAGGGTGTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR GCA 90 bp AATAAGGACACTCCATATGCCGTTGGGCAAGAGGAATTAGCCTACAGAAAGGATGGTTCTTCGGACTCTTaGTTAATTGCGCCGATCCTT +
Preference number: 4 (lower is better)
Translates to: NKDTPYAVGQEELAYRKDGSSDS*LIAPIL
Trigger: AAGGATCGGCGCAATTAAGCAAGAGTCCGAAGAACC...ATCCTTTCTGTAGGCTAATTCCTCTTGCCCAACGGCATATGGAGTGTCCTTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR TCA 90 bp AATAAGGACACTCCATATGCCGTTGGGCAAGAGGAATTAGCCTACAGAAAGGATTTTGAAAGTACCTTCTaGTCAAAGCCACAGACCCAG +
Preference number: 4 (lower is better)
Translates to: NKDTPYAVGQEELAYRKDFESTF*SKPQTQ
Trigger: CTGGGTCTGTGGCTTTGATCAGAAGGTACTTTCAAA...ATCCTTTCTGTAGGCTAATTCCTCTTGCCCAACGGCATATGGAGTGTCCTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR GCA 90 bp TGTCAAGCAATCCTTCGTGACTTCCCTATGCCAAAAGGAGCTTTAAAGTCCTATTTTTACTCAGCTTTGTaGACTTTGGGGTGCTCGCTC +
Preference number: 4 (lower is better)
Translates to: CQAILRDFPMPKGALKSYFYSAL*TLGCSL
Trigger: GAGCGAGCACCCCAAAGTGCACAAAGCTGAGTAAAA...ATAGGACTTTAAAGCTCCTTTTGGCATAGGGAAGTCACGAAGGATTGCTTGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR CCA 90 bp TGTCAAGCAATCCTTCGTGACTTCCCTATGCCAAAAGGAGCTTTAAAGTCCTATCTTGACTTGTACACTTaGTACATGTGGGCAGGGTAC +
Preference number: 4 (lower is better)
Translates to: CQAILRDFPMPKGALKSYLDLYT*YMWAGY
Trigger: GTACCCTGCCCACATGTACCAAGTGTACAAGTCAAG...ATAGGACTTTAAAGCTCCTTTTGGCATAGGGAAGTCACGAAGGATTGCTTGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR GCA 90 bp ACACACACCCTGAATCTGCTCTCCATGCCTCAGATTATCTCAGTATACACAATGCTTGGTTTGGTTCCCTaGACAGTAAGTACTAATGGT +
Preference number: 4 (lower is better)
Translates to: THTLNLLSMPQIISVYTMLGLVP*TVSTNG
Trigger: ACCATTAGTACTTACTGTGCAGGGAACCAAACCAAG...CATTGTGTATACTGAGATAATCTGAGGCATGGAGAGCAGATTCAGGGTGTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR TCA 90 bp TGTCAAGCAATCCTTCGTGACTTCCCTATGCCAAAAGGAGCTTTAAAGTCCTATCTTTATTCCCCGTCTTaGCTTGTACACTTGGTACAT +
Preference number: 4 (lower is better)
Translates to: CQAILRDFPMPKGALKSYLYSPS*LVHLVH
Trigger: ATGTACCAAGTGTACAAGTCAAGACGGGGAATAAAG...ATAGGACTTTAAAGCTCCTTTTGGCATAGGGAAGTCACGAAGGATTGCTTGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR GCA 90 bp ACACACACCCTGAATCTGCTCTCCATGCCTCAGATTATCTCAGTATACACAATGAAGTTCAAGAACCACTaGTTTTTCCAAGTGACCCAA +
Preference number: 4 (lower is better)
Translates to: THTLNLLSMPQIISVYTMKFKNH*FFQVTQ
Trigger: TTGGGTCACTTGGAAAAAGCAGTGGTTCTTGAACTT...CATTGTGTATACTGAGATAATCTGAGGCATGGAGAGCAGATTCAGGGTGTGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR GCA 90 bp TGTCAAGCAATCCTTCGTGACTTCCCTATGCCAAAAGGAGCTTTAAAGTCCTATTCTCAGTATACACAATaGAACAATCTTGCAGCATTC +
Preference number: 4 (lower is better)
Translates to: CQAILRDFPMPKGALKSYSQYTQ*NNLAAF
Trigger: GAATGCTGCAAGATTGTTGCATTGTGTATACTGAGA...ATAGGACTTTAAAGCTCCTTTTGGCATAGGGAAGTCACGAAGGATTGCTTGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS CCA 90 bp GGCCCGGTGTCCCCGCGGCCTCTGGCTCCGACTCAGCGCACAGACTaGCGGTGTGTGCTCCCTGCGCGGTCTGTCTGCGCCGTGCGAGCC +
Preference number: 5 (lower is better)
Translates to: GPVSPRPLAPTQRTD*RCVLPARSVCAVRA
Trigger: GGCTCGCACGGCGCAGACAGACCGCGCAGGGAGCACACACCGCCAGTCTGTGCGCTGAGTCGGAGCCAGAGGCCGCGGGGACACCGGGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256495.4
ENST00000467610.1
CDS GCA 90 bp TTGCGCGCTGGGGATCCGCTCCATGGCGCGGCGAGCCGGGGCCACTaGGCGCTCCTGTCTGCACTAGCGGAGCGTCTGGATGAGGACTGC +
Preference number: 5 (lower is better)
Translates to: LRAGDPLHGAASRGH*ALLSALAERLDEDC
Trigger: GCAGTCCTCATCCAGACGCTCCGCTAGTGCAGACAGGAGCGCGCAGTGGCCCCGGCTCGCCGCGCCATGGAGCGGATCCCCAGCGCGCAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256495.4
ENST00000467610.1
CDS CCA 90 bp CAGCTTCAGTTGGGGGCGTGCATGGCCCGGTGTCCCCGCGGCCTCTaGCTCCGACTCAGCGCACAGACTGGCGGTGTGTGCTCCCTGCGC +
Preference number: 5 (lower is better)
Translates to: QLQLGACMARCPRGL*LRLSAQTGGVCSLR
Trigger: GCGCAGGGAGCACACACCGCCAGTCTGTGCGCTGAGTCGGAGCCAGAGGCCGCGGGGACACCGGGCCATGCACGCCCCCAACTGAAGCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256495.4
ENST00000467610.1
CDS GCA 90 bp GCTGCTGGAATCTTCGGCTTTGAGATGCAGCTTCAGTTGGGGGCGTaGATGGCCCGGTGTCCCCGCGGCCTCTGGCTCCGACTCAGCGCA +
Preference number: 5 (lower is better)
Translates to: AAGIFGFEMQLQLGA*MARCPRGLWLRLSA
Trigger: TGCGCTGAGTCGGAGCCAGAGGCCGCGGGGACACCGGGCCATGCACGCCCCCAACTGAAGCTGCATCTCAAAGCCGAAGATTCCAGCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256495.4
ENST00000467610.1
CDS GCA 90 bp CACTGCGCGCTCCTGTCTGCACTAGCGGAGCGTCTGGATGAGGACTaGCCTGGAGAGGGCTTCGGGGGTCTCTCCGCAGATGTTCCTCTG +
Preference number: 5 (lower is better)
Translates to: HCALLSALAERLDED*PGEGFGGLSADVPL
Trigger: CAGAGGAACATCTGCGGAGAGACCCCCGAAGCCCTCTCCAGGGCAGTCCTCATCCAGACGCTCCGCTAGTGCAGACAGGAGCGCGCAGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256495.4
ENST00000467610.1
CDS CCA 90 bp CTGGAATCTTCGGCTTTGAGATGCAGCTTCAGTTGGGGGCGTGCATaGCCCGGTGTCCCCGCGGCCTCTGGCTCCGACTCAGCGCACAGA +
Preference number: 5 (lower is better)
Translates to: LESSALRCSFSWGRA*PGVPAASGSDSAHR
Trigger: TCTGTGCGCTGAGTCGGAGCCAGAGGCCGCGGGGACACCGGGCCATGCACGCCCCCAACTGAAGCTGCATCTCAAAGCCGAAGATTCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256495.4
ENST00000467610.1
CDS CCA 90 bp CTGGAGGTACCACCCTGCAGCAGCTCCGAGACCACCCGGTGGAGGTaGGTGACAAGCTGCGAAGACTTCAGGTCCCGAGTGTTCTCGTGC +
Preference number: 5 (lower is better)
Translates to: LEVPPCSSSETTRWR*VTSCEDFRSRVFSC
Trigger: GCACGAGAACACTCGGGACCTGAAGTCTTCGCAGCTTGTCACCCACCTCCACCGGGTGGTCTCGGAGCTGCTGCAGGGTGGTACCTCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256495.4
ENST00000467610.1
CDS CCA 90 bp GGCTTCCTGGAGGTACCACCCTGCAGCAGCTCCGAGACCACCCGGTaGAGGTGGGTGACAAGCTGCGAAGACTTCAGGTCCCGAGTGTTC +
Preference number: 5 (lower is better)
Translates to: GFLEVPPCSSSETTR*RWVTSCEDFRSRVF
Trigger: GAACACTCGGGACCTGAAGTCTTCGCAGCTTGTCACCCACCTCCACCGGGTGGTCTCGGAGCTGCTGCAGGGTGGTACCTCCAGGAAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256495.4
ENST00000467610.1
CDS TCA 90 bp AGGTACCACCCTGCAGCAGCTCCGAGACCACCCGGTGGAGGTGGGTaGCAAGCTGCGAAGACTTCAGGTCCCGAGTGTTCTCGTGCTTGG +
Preference number: 5 (lower is better)
Translates to: RYHPAAAPRPPGGGG*QAAKTSGPECSRAW
Trigger: CCAAGCACGAGAACACTCGGGACCTGAAGTCTTCGCAGCTTGTCACCCACCTCCACCGGGTGGTCTCGGAGCTGCTGCAGGGTGGTACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256495.4
ENST00000467610.1
CDS TCA 90 bp CGCTGCCGCTCTGCTCCCCACTCGAGTGAGCGAAAGTCCGCTGGATaGCTGGCACGCAGTTTTTCCCAGGACCTTCCGAACCTTTGGCCG +
Preference number: 5 (lower is better)
Translates to: RCRSAPHSSERKSAG*LARSFSQDLPNLWP
Trigger: CGGCCAAAGGTTCGGAAGGTCCTGGGAAAAACTGCGTGCCAGTCATCCAGCGGACTTTCGCTCACTCGAGTGGGGAGCAGAGCGGCAGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256495.4
ENST00000467610.1
CDS GCA 90 bp CCCTGCAGCAGCTCCGAGACCACCCGGTGGAGGTGGGTGACAAGCTaGGAAGACTTCAGGTCCCGAGTGTTCTCGTGCTTGGCCAGATAC +
Preference number: 5 (lower is better)
Translates to: PCSSSETTRWRWVTS*EDFRSRVFSCLARY
Trigger: GTATCTGGCCAAGCACGAGAACACTCGGGACCTGAAGTCTTCGCAGCTTGTCACCCACCTCCACCGGGTGGTCTCGGAGCTGCTGCAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256495.4
ENST00000467610.1
CDS CCA 90 bp GCCGCTCTGCTCCCCACTCGAGTGAGCGAAAGTCCGCTGGATGACTaGCACGCAGTTTTTCCCAGGACCTTCCGAACCTTTGGCCGGAGA +
Preference number: 5 (lower is better)
Translates to: AALLPTRVSESPLDD*HAVFPRTFRTFGRR
Trigger: TCTCCGGCCAAAGGTTCGGAAGGTCCTGGGAAAAACTGCGTGCCAGTCATCCAGCGGACTTTCGCTCACTCGAGTGGGGAGCAGAGCGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256495.4
ENST00000467610.1
CDS-3UTR CAA 90 bp GGGGAGCAGACCTGCGGAAACCTCCCCAAACCACTACCGTGCTATGCCAGTGCCGGACCTTCCGAACCTTaGGCCGGAGAGCTGGGTTTT +
Preference number: 5 (lower is better)
Translates to: GEQTCGNLPKPLPCYASAGPSEP*AGELGF
Trigger: AAAACCCAGCTCTCCGGCCAAAGGTTCGGAAGGTCC...GGCACTGGCATAGCACGGTAGTGGTTTGGGGAGGTTTCCGCAGGTCTGCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR CAA 90 bp GGGGAGCAGACCTGCGGAAACCTCCCCAAACCACTACCGTGCTATGCCAGTGCCCGTCCGTGGTCACTTTaGAAGCACGGCTGCTCACTG +
Preference number: 5 (lower is better)
Translates to: GEQTCGNLPKPLPCYASARPWSL*KHGCSL
Trigger: CAGTGAGCAGCCGTGCTTCAAAAGTGACCACGGACG...GGCACTGGCATAGCACGGTAGTGGTTTGGGGAGGTTTCCGCAGGTCTGCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS CCA 90 bp AGAAGGGAGTCTCTGGGGCATGAGCAAGGGAGCCGAGATCTTGTCTaGGTTCATGAAGCTAGAGAGGGCTGCGGCAGAGGCGTTGAGGCC +
Preference number: 5 (lower is better)
Translates to: RRESLGHEQGSRDLV*VHEAREGCGRGVEA
Trigger: GGCCTCAACGCCTCTGCCGCAGCCCTCTCTAGCTTCATGAACCCAGACAAGATCTCGGCTCCCTTGCTCATGCCCCAGAGACTCCCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS CCA 90 bp CTTCAGAGCTTGGAGCAAGACAGAAGAGTCGACGGACGGATGAGCTaGCAAGGGAGAAGGGAGTCTCTGGGGCATGAGCAAGGGAGCCGA +
Preference number: 5 (lower is better)
Translates to: LQSLEQDRRVDGRMS*QGRRESLGHEQGSR
Trigger: TCGGCTCCCTTGCTCATGCCCCAGAGACTCCCTTCTCCCTTGCCAGCTCATCCGTCCGTCGACTCTTCTGTCTTGCTCCAAGCTCTGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR CAA 90 bp GGGGAGCAGACCTGCGGAAACCTCCCCAAACCACTACCGTGCTATGCCAGTGCCGGGTTCTTCGGACTCTaGCTTAATTGCGCCGATCCT +
Preference number: 5 (lower is better)
Translates to: GEQTCGNLPKPLPCYASAGFFGL*LNCADP
Trigger: AGGATCGGCGCAATTAAGCAAGAGTCCGAAGAACCC...GGCACTGGCATAGCACGGTAGTGGTTTGGGGAGGTTTCCGCAGGTCTGCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR CAA 90 bp AGGGAACTACATTCTCTTTATTCTTCCGAGGCAGGGGTGGGGAGCAGACCTGCGGCTGCGGCAGAGGCGTaGAGGCCTGGGTATAGCACT +
Preference number: 5 (lower is better)
Translates to: RELHSLYSSEAGVGSRPAAAAEA*RPGYST
Trigger: AGTGCTATACCCAGGCCTCAACGCCTCTGCCGCAGC...CGCAGGTCTGCTCCCCACCCCTGCCTCGGAAGAATAAAGAGAATGTAGTTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR CAA 90 bp GGGGAGCAGACCTGCGGAAACCTCCCCAAACCACTACCGTGCTATGCCAGTGCCCGCATTTCTCAGACCTaGGTTTGGTTCCCTGCACAG +
Preference number: 5 (lower is better)
Translates to: GEQTCGNLPKPLPCYASARISQT*VWFPAQ
Trigger: CTGTGCAGGGAACCAAACCAAGGTCTGAGAAATGCG...GGCACTGGCATAGCACGGTAGTGGTTTGGGGAGGTTTCCGCAGGTCTGCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS CCA 90 bp GGTATAGCACTGGCACTGAGGTGGGATACCAGCACTTCTCCAGCATaGGCAGGTAGGCAGTCGCTGAAGGTGGGATCAGGTAGAAGGGCA +
Preference number: 5 (lower is better)
Translates to: GIALALRWDTSTSPA*AGRQSLKVGSGRRA
Trigger: TGCCCTTCTACCTGATCCCACCTTCAGCGACTGCCTACCTGCCCATGCTGGAGAAGTGCTGGTATCCCACCTCAGTGCCAGTGCTATACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR CAA 90 bp AGGGAACTACATTCTCTTTATTCTTCCGAGGCAGGGGTGGGGAGCAGACCTGCGTCAGCTTTGTGCACTTaGGGGTGCTCGCTCGGGGTG +
Preference number: 5 (lower is better)
Translates to: RELHSLYSSEAGVGSRPASALCT*GCSLGV
Trigger: CACCCCGAGCGAGCACCCCAAAGTGCACAAAGCTGA...CGCAGGTCTGCTCCCCACCCCTGCCTCGGAAGAATAAAGAGAATGTAGTTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS TCA 90 bp ATTGGCTTCAGAGCTTGGAGCAAGACAGAAGAGTCGACGGACGGATaGGCTGGCAAGGGAGAAGGGAGTCTCTGGGGCATGAGCAAGGGA +
Preference number: 5 (lower is better)
Translates to: IGFRAWSKTEESTDG*AGKGEGSLWGMSKG
Trigger: TCCCTTGCTCATGCCCCAGAGACTCCCTTCTCCCTTGCCAGCTCATCCGTCCGTCGACTCTTCTGTCTTGCTCCAAGCTCTGAAGCCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS GCA 90 bp CCGGCAGAGGAGCAGAGTAGCAGAGTAGCACCCAGAACCATCGTCTaGCCTTTCTTTTCCAAGTCACTCAGAAGAGGCACCGAGCCCACA +
Preference number: 5 (lower is better)
Translates to: PAEEQSSRVAPRTIV*PFFSKSLRRGTEPT
Trigger: TGTGGGCTCGGTGCCTCTTCTGAGTGACTTGGAAAAGAAAGGGCAGACGATGGTTCTGGGTGCTACTCTGCTACTCTGCTCCTCTGCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467610.1
CDS CCA 90 bp TGCTTAATTGCGCCGATCCTTTCTCCCATCGTGAACCTGCGTCCGTaGTCACTTTTGAAGCACGGCTGCTCACTGCGCAAGTCGCCCTTC +
Preference number: 5 (lower is better)
Translates to: CLIAPILSPIVNLRP*SLLKHGCSLRKSPF
Trigger: GAAGGGCGACTTGCGCAGTGAGCAGCCGTGCTTCAAAAGTGACCACGGACGCAGGTTCACGATGGGAGAAAGGATCGGCGCAATTAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS TCA 90 bp TGCGAAGACTTCAGGTCCCGAGTGTTCTCGTGCTTGGCCAGATACTaGAGCACCTCCCGGGCACATGTCTGGAAACCTGAGCAGAACATC +
Preference number: 5 (lower is better)
Translates to: CEDFRSRVFSCLARY*STSRAHVWKPEQNI
Trigger: GATGTTCTGCTCAGGTTTCCAGACATGTGCCCGGGAGGTGCTTCAGTATCTGGCCAAGCACGAGAACACTCGGGACCTGAAGTCTTCGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256495.4
ENST00000467610.1
CDS CCA 90 bp TTGCTGTCCTCGCTCCGCTTTATTCCCCGTCTTGACTTGTACACTTaGTACATGTGGGCAGGGTACATCCCTGGTAGGTCTCCGTGCTCC +
Preference number: 5 (lower is better)
Translates to: LLSSLRFIPRLDLYT*YMWAGYIPGRSPCS
Trigger: GGAGCACGGAGACCTACCAGGGATGTACCCTGCCCACATGTACCAAGTGTACAAGTCAAGACGGGGAATAAAGCGGAGCGAGGACAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256495.4
ENST00000467610.1
CDS-3UTR CAA 90 bp GCTTTGTGCACTTTGGGGTGCTCGCTCGGGGTGTCCGCATTTCTCAGACCTTGGCTGGAATCTTCGGCTTaGAGATGCAGCTTCAGTTGG +
Preference number: 5 (lower is better)
Translates to: ALCTLGCSLGVSAFLRPWLESSA*RCSFSW
Trigger: CCAACTGAAGCTGCATCTCAAAGCCGAAGATTCCAG...CCAAGGTCTGAGAAATGCGGACACCCCGAGCGAGCACCCCAAAGTGCACAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR CAA 90 bp GCTTTGTGCACTTTGGGGTGCTCGCTCGGGGTGTCCGCATTTCTCAGACCTTGGATTCCCCGTCTTGACTaGTACACTTGGTACATGTGG +
Preference number: 5 (lower is better)
Translates to: ALCTLGCSLGVSAFLRPWIPRLD*YTWYMW
Trigger: CCACATGTACCAAGTGTACAAGTCAAGACGGGGAAT...CCAAGGTCTGAGAAATGCGGACACCCCGAGCGAGCACCCCAAAGTGCACAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR CAA 90 bp AATAAGGACACTCCATATGCCGTTGGGCAAGAGGAATTAGCCTACAGAAAGGATGAGATGCAGCTTCAGTaGGGGGCGTGCATGGCCCGG +
Preference number: 5 (lower is better)
Translates to: NKDTPYAVGQEELAYRKDEMQLQ*GACMAR
Trigger: CCGGGCCATGCACGCCCCCAACTGAAGCTGCATCTC...ATCCTTTCTGTAGGCTAATTCCTCTTGCCCAACGGCATATGGAGTGTCCTTATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS TCA 90 bp AGCACCTCCCGGGCACATGTCTGGAAACCTGAGCAGAACATCTCTTaGCCTGTTTCGACATTTCTCCCTGACAGCTCACCAGCTTGTAAA +
Preference number: 5 (lower is better)
Translates to: STSRAHVWKPEQNIS*PVSTFLPDSSPACK
Trigger: TTTACAAGCTGGTGAGCTGTCAGGGAGAAATGTCGAAACAGGTCAAGAGATGTTCTGCTCAGGTTTCCAGACATGTGCCCGGGAGGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256495.4
ENST00000467610.1
CDS-3UTR CAA 90 bp AATAAGGACACTCCATATGCCGTTGGGCAAGAGGAATTAGCCTACAGAAAGGATTGGCGGTGCCAAGGCTaGGTTAGGCCTTTGAGAAGC +
Preference number: 5 (lower is better)
Translates to: NKDTPYAVGQEELAYRKDWRCQG*VRPLRS
Trigger: GCTTCTCAAAGGCCTAACCAAGCCTTGGCACCGCCA...ATCCTTTCTGTAGGCTAATTCCTCTTGCCCAACGGCATATGGAGTGTCCTTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS CCA 90 bp CCCAAAGTTGTAAGTTTGAGATGTTCGGGTAGGAGATCCTTCAGCTaGGCGATGCACTCGTTAATCCGGTCACGTCTCTTTTTCTCGATG +
Preference number: 5 (lower is better)
Translates to: PKVVSLRCSGRRSFS*AMHSLIRSRLFFSM
Trigger: CATCGAGAAAAAGAGACGTGACCGGATTAACGAGTGCATCGCCCAGCTGAAGGATCTCCTACCCGAACATCTCAAACTTACAACTTTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256495.4
ENST00000460806.1
ENST00000467610.1
CDS-3UTR CAA 90 bp ACACACACCCTGAATCTGCTCTCCATGCCTCAGATTATCTCAGTATACACAATGCTGAGTCTGAGCTCTTaGAAATCCCCTGGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: THTLNLLSMPQIISVYTMLSLSS*KSPGLL
Trigger: CAGCAGCCCAGGGGATTTCAAAGAGCTCAGACTCAG...CATTGTGTATACTGAGATAATCTGAGGCATGGAGAGCAGATTCAGGGTGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR CAA 90 bp AATAAGGACACTCCATATGCCGTTGGGCAAGAGGAATTAGCCTACAGAAAGGATTTGAAGTCCATCACTTaGGGAGCTGGGTCTGATGGC +
Preference number: 5 (lower is better)
Translates to: NKDTPYAVGQEELAYRKDLKSIT*GAGSDG
Trigger: GCCATCAGACCCAGCTCCCAAAGTGATGGACTTCAA...ATCCTTTCTGTAGGCTAATTCCTCTTGCCCAACGGCATATGGAGTGTCCTTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR CAA 90 bp CTTCGTGACTTCCCTATGCCAAAAGGAGCTTTAAAGTCCTATACCAACACGCAGAAGGGAGCCGAGATCTaGTCTGGGTTCATGAAGCTA +
Preference number: 5 (lower is better)
Translates to: LRDFPMPKGALKSYTNTQKGAEI*SGFMKL
Trigger: TAGCTTCATGAACCCAGACAAGATCTCGGCTCCCTT...CTGCGTGTTGGTATAGGACTTTAAAGCTCCTTTTGGCATAGGGAAGTCACGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR CAA 90 bp GAGACGGAATCCTTTTTAGCAATAAGGACACTCCATATGCCGTTGGGCAAGAGGGCTTTATTCCCCGTCTaGACTTGTACACTTGGTACA +
Preference number: 5 (lower is better)
Translates to: ETESFLAIRTLHMPLGKRALFPV*TCTLGT
Trigger: TGTACCAAGTGTACAAGTCAAGACGGGGAATAAAGC...CCTCTTGCCCAACGGCATATGGAGTGTCCTTATTGCTAAAAAGGATTCCGTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR CAA 90 bp CTTCGTGACTTCCCTATGCCAAAAGGAGCTTTAAAGTCCTATACCAACACGCAGGAGCTGGGTTTTTCCTaGAAGTCCATCACTTTGGGA +
Preference number: 5 (lower is better)
Translates to: LRDFPMPKGALKSYTNTQELGFS*KSITLG
Trigger: TCCCAAAGTGATGGACTTCAAGGAAAAACCCAGCTC...CTGCGTGTTGGTATAGGACTTTAAAGCTCCTTTTGGCATAGGGAAGTCACGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR CAA 90 bp CTTCGTGACTTCCCTATGCCAAAAGGAGCTTTAAAGTCCTATACCAACACGCAGTTCTCAGACCTTGGTTaGGTTCCCTGCACAGTAAGT +
Preference number: 5 (lower is better)
Translates to: LRDFPMPKGALKSYTNTQFSDLG*VPCTVS
Trigger: ACTTACTGTGCAGGGAACCAAACCAAGGTCTGAGAA...CTGCGTGTTGGTATAGGACTTTAAAGCTCCTTTTGGCATAGGGAAGTCACGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS TCA 90 bp TTCTCCCTGACAGCTCACCAGCTTGTAAACCACTCTGCAGGGCAATaGTTTTCTGCTGCTGCTGATCAATTAGGTTTGTTAGTGCTTTCA +
Preference number: 5 (lower is better)
Translates to: FSLTAHQLVNHSAGQ*FSAAADQLGLLVLS
Trigger: TGAAAGCACTAACAAACCTAATTGATCAGCAGCAGCAGAAAATCATTGCCCTGCAGAGTGGTTTACAAGCTGGTGAGCTGTCAGGGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256495.4
ENST00000467610.1
CDS TCA 90 bp GCCAGAATCAGCACTCACCAGCTTGTAAACCACTCTGCAGGGCAATaGTTTTCTGCTGCTGCTGATCAATTAGGTTTGTTAGTGCTTTCA +
Preference number: 5 (lower is better)
Translates to: ARISTHQLVNHSAGQ*FSAAADQLGLLVLS
Trigger: TGAAAGCACTAACAAACCTAATTGATCAGCAGCAGCAGAAAATCATTGCCCTGCAGAGTGGTTTACAAGCTGGTGAGTGCTGATTCTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460806.1
CDS TCA 90 bp CCAGCTTGTAAACCACTCTGCAGGGCAATGATTTTCTGCTGCTGCTaGTCAATTAGGTTTGTTAGTGCTTTCACATGCTTCAAGGTAAGT +
Preference number: 5 (lower is better)
Translates to: PACKPLCRAMIFCCC*SIRFVSAFTCFKVS
Trigger: ACTTACCTTGAAGCATGTGAAAGCACTAACAAACCTAATTGATCAGCAGCAGCAGAAAATCATTGCCCTGCAGAGTGGTTTACAAGCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256495.4
ENST00000460806.1
ENST00000467610.1
CDS-3UTR CAA 90 bp TGTCAAGCAATCCTTCGTGACTTCCCTATGCCAAAAGGAGCTTTAAAGTCCTATCCCAAAGTTGTAAGTTaGAGATGTTCGGGTAGGAGA +
Preference number: 5 (lower is better)
Translates to: CQAILRDFPMPKGALKSYPKVVS*RCSGRR
Trigger: TCTCCTACCCGAACATCTCAAACTTACAACTTTGGG...ATAGGACTTTAAAGCTCCTTTTGGCATAGGGAAGTCACGAAGGATTGCTTGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR CAA 90 bp GAGACGGAATCCTTTTTAGCAATAAGGACACTCCATATGCCGTTGGGCAAGAGGAAGACTTTGAAGCTTTaGAAAATCCAGCTGATGTGT +
Preference number: 5 (lower is better)
Translates to: ETESFLAIRTLHMPLGKRKTLKL*KIQLMC
Trigger: ACACATCAGCTGGATTTTCAAAAGCTTCAAAGTCTT...CCTCTTGCCCAACGGCATATGGAGTGTCCTTATTGCTAAAAAGGATTCCGTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR CAA 90 bp AATAAGGACACTCCATATGCCGTTGGGCAAGAGGAATTAGCCTACAGAAAGGATCTGAGATTAACTGGTTaGCTTCAGCCAAGAAAGAAG +
Preference number: 5 (lower is better)
Translates to: NKDTPYAVGQEELAYRKDLRLTG*LQPRKK
Trigger: CTTCTTTCTTGGCTGAAGCAAACCAGTTAATCTCAG...ATCCTTTCTGTAGGCTAATTCCTCTTGCCCAACGGCATATGGAGTGTCCTTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS-3UTR CAA 90 bp TGTCAAGCAATCCTTCGTGACTTCCCTATGCCAAAAGGAGCTTTAAAGTCCTATGCTGATCAATTAGGTTaGTTAGTGCTTTCACATGCT +
Preference number: 5 (lower is better)
Translates to: CQAILRDFPMPKGALKSYADQLG*LVLSHA
Trigger: AGCATGTGAAAGCACTAACAAACCTAATTGATCAGC...ATAGGACTTTAAAGCTCCTTTTGGCATAGGGAAGTCACGAAGGATTGCTTGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS GCA 72 bp GGGGATCCGCTCCATGGCGCGGCGAGCCGGGGCCACTaGGCGCTCCTGTCTGCACTAGCGGAGCGTCTGGAT +
Preference number: 6 (lower is better)
Translates to: GDPLHGAASRGH*ALLSALAERLD
Trigger: ATCCAGACGCTCCGCTAGTGCAGACAGGAGCGCGCAGTGGCCCCGGCTCGCCGCGCCATGGAGCGGATCCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256495.4
ENST00000467610.1
CDS CCA 72 bp TTGGGGGCGTGCATGGCCCGGTGTCCCCGCGGCCTCTaGCTCCGACTCAGCGCACAGACTGGCGGTGTGTGC +
Preference number: 6 (lower is better)
Translates to: LGACMARCPRGL*LRLSAQTGGVC
Trigger: GCACACACCGCCAGTCTGTGCGCTGAGTCGGAGCCAGAGGCCGCGGGGACACCGGGCCATGCACGCCCCCAA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256495.4
ENST00000467610.1
CDS GCA 72 bp CTCTGGCTCCGACTCAGCGCACAGACTGGCGGTGTGTaGTCCCTGCGCGGTCTGTCTGCGCCGTGCGAGCCA +
Preference number: 6 (lower is better)
Translates to: LWLRLSAQTGGV*SLRGLSAPCEP
Trigger: TGGCTCGCACGGCGCAGACAGACCGCGCAGGGAGCACACACCGCCAGTCTGTGCGCTGAGTCGGAGCCAGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256495.4
ENST00000467610.1
CDS CAA 72 bp GGTCTCCTGCAAGACGCACGGGGAGGCGGTGGGCGCTaGGGGAAGGAGATGAGAAGCCTATCCTCCCAGCCC +
Preference number: 6 (lower is better)
Translates to: GLLQDARGGGGR*GKEMRSLSSQP
Trigger: GGGCTGGGAGGATAGGCTTCTCATCTCCTTCCCCAAGCGCCCACCGCCTCCCCGTGCGTCTTGCAGGAGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460806.1
ENST00000467610.1
CDS GCA 72 bp TCCGACTCAGCGCACAGACTGGCGGTGTGTGCTCCCTaGGCGGTCTGTCTGCGCCGTGCGAGCCAAGTGAAT +
Preference number: 6 (lower is better)
Translates to: SDSAHRLAVCAP*AVCLRRASQVN
Trigger: ATTCACTTGGCTCGCACGGCGCAGACAGACCGCGCAGGGAGCACACACCGCCAGTCTGTGCGCTGAGTCGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256495.4
ENST00000467610.1
CDS GCA 72 bp TACATGTGGGCAGGGTACATCCCTGGTAGGTCTCCGTaGTCCAGTCCCGGTGCTTTGGGCAGGCAGGCGGGG +
Preference number: 6 (lower is better)
Translates to: YMWAGYIPGRSP*SSPGALGRQAG
Trigger: CCCCGCCTGCCTGCCCAAAGCACCGGGACTGGAGCACGGAGACCTACCAGGGATGTACCCTGCCCACATGTA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256495.4
ENST00000467610.1
CDS GCA 72 bp CTCCTGTCTGCACTAGCGGAGCGTCTGGATGAGGACTaGCCTGGAGAGGGCTTCGGGGGTCTCTCCGCAGAT +
Preference number: 6 (lower is better)
Translates to: LLSALAERLDED*PGEGFGGLSAD
Trigger: ATCTGCGGAGAGACCCCCGAAGCCCTCTCCAGGGCAGTCCTCATCCAGACGCTCCGCTAGTGCAGACAGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256495.4
ENST00000467610.1
CDS CCA 72 bp CTGCTGGAATCTTCGGCTTTGAGATGCAGCTTCAGTTaGGGGCGTGCATGGCCCGGTGTCCCCGCGGCCTCT +
Preference number: 6 (lower is better)
Translates to: LLESSALRCSFS*GRAWPGVPAAS
Trigger: AGAGGCCGCGGGGACACCGGGCCATGCACGCCCCCAACTGAAGCTGCATCTCAAAGCCGAAGATTCCAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256495.4
ENST00000467610.1
CDS CCA 72 bp GAGGTACCACCCTGCAGCAGCTCCGAGACCACCCGGTaGAGGTGGGTGACAAGCTGCGAAGACTTCAGGTCC +
Preference number: 6 (lower is better)
Translates to: EVPPCSSSETTR*RWVTSCEDFRS
Trigger: GGACCTGAAGTCTTCGCAGCTTGTCACCCACCTCCACCGGGTGGTCTCGGAGCTGCTGCAGGGTGGTACCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256495.4
ENST00000467610.1
CDS CAA 72 bp CGCGAGGGGCTGAGCGCAGGGTCCCTAGGGGTGCACTaGCTTACCTTGCTGTCCTCGCTCCGCTTTATTCCC +
Preference number: 6 (lower is better)
Translates to: REGLSAGSLGVH*LTLLSSLRFIP
Trigger: GGGAATAAAGCGGAGCGAGGACAGCAAGGTAAGCAAGTGCACCCCTAGGGACCCTGCGCTCAGCCCCTCGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467610.1
CDS TCA 72 bp CCTGCAGCAGCTCCGAGACCACCCGGTGGAGGTGGGTaGCAAGCTGCGAAGACTTCAGGTCCCGAGTGTTCT +
Preference number: 6 (lower is better)
Translates to: PAAAPRPPGGGG*QAAKTSGPECS
Trigger: AGAACACTCGGGACCTGAAGTCTTCGCAGCTTGTCACCCACCTCCACCGGGTGGTCTCGGAGCTGCTGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256495.4
ENST00000467610.1
CDS CAA 72 bp GGGTTCATGAAGCTAGAGAGGGCTGCGGCAGAGGCGTaGAGGCCTGGGTATAGCACTGGCACTGAGGTGGGA +
Preference number: 6 (lower is better)
Translates to: GFMKLERAAAEA*RPGYSTGTEVG
Trigger: TCCCACCTCAGTGCCAGTGCTATACCCAGGCCTCAACGCCTCTGCCGCAGCCCTCTCTAGCTTCATGAACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS GCA 72 bp AAATCCCCTGGGCTGCTGGAATCTTCGGCTTTGAGATaGAGCTTCAGTTGGGGGCGTGCATGGCCCGGTGTC +
Preference number: 6 (lower is better)
Translates to: KSPGLLESSALR*SFSWGRAWPGV
Trigger: GACACCGGGCCATGCACGCCCCCAACTGAAGCTGCATCTCAAAGCCGAAGATTCCAGCAGCCCAGGGGATTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256495.4
ENST00000467610.1
CDS CCA 72 bp GCGCCGATCCTTTCTCCCATCGTGAACCTGCGTCCGTaGTCACTTTTGAAGCACGGCTGCTCACTGCGCAAG +
Preference number: 6 (lower is better)
Translates to: APILSPIVNLRP*SLLKHGCSLRK
Trigger: CTTGCGCAGTGAGCAGCCGTGCTTCAAAAGTGACCACGGACGCAGGTTCACGATGGGAGAAAGGATCGGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS CCA 72 bp TCTCTGGGGCATGAGCAAGGGAGCCGAGATCTTGTCTaGGTTCATGAAGCTAGAGAGGGCTGCGGCAGAGGC +
Preference number: 6 (lower is better)
Translates to: SLGHEQGSRDLV*VHEAREGCGRG
Trigger: GCCTCTGCCGCAGCCCTCTCTAGCTTCATGAACCCAGACAAGATCTCGGCTCCCTTGCTCATGCCCCAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS CCA 72 bp ATTTGTAGGTCTCCTGCAAGACGCACGGGGAGGCGGTaGGCGCTTGGGGAAGGAGATGAGAAGCCTATCCTC +
Preference number: 6 (lower is better)
Translates to: ICRSPARRTGRR*ALGEGDEKPIL
Trigger: GAGGATAGGCTTCTCATCTCCTTCCCCAAGCGCCCACCGCCTCCCCGTGCGTCTTGCAGGAGACCTACAAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460806.1
ENST00000467610.1
CDS CAA 72 bp GGGAGTCTCTGGGGCATGAGCAAGGGAGCCGAGATCTaGTCTGGGTTCATGAAGCTAGAGAGGGCTGCGGCA +
Preference number: 6 (lower is better)
Translates to: GSLWGMSKGAEI*SGFMKLERAAA
Trigger: TGCCGCAGCCCTCTCTAGCTTCATGAACCCAGACAAGATCTCGGCTCCCTTGCTCATGCCCCAGAGACTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS CAA 72 bp CTGAGCGCAGGGTCCCTAGGGGTGCACTTGCTTACCTaGCTGTCCTCGCTCCGCTTTATTCCCCGTCTTGAC +
Preference number: 6 (lower is better)
Translates to: LSAGSLGVHLLT*LSSLRFIPRLD
Trigger: GTCAAGACGGGGAATAAAGCGGAGCGAGGACAGCAAGGTAAGCAAGTGCACCCCTAGGGACCCTGCGCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467610.1
CDS CAA 90 bp GCGCCGATCCTTTCTCCCATCGTGAACCTGCGTCCGTGGTCACTTTaGAAGCACGGCTGCTCACTGCGCAAGTCGCCCTTCTCCGATTCT +
Preference number: 6 (lower is better)
Translates to: APILSPIVNLRPWSL*KHGCSLRKSPFSDS
Trigger: AGAATCGGAGAAGGGCGACTTGCGCAGTGAGCAGCCGTGCTTCAAAAGTGACCACGGACGCAGGTTCACGATGGGAGAAAGGATCGGCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS CAA 90 bp AAGGGAGAAGGGAGTCTCTGGGGCATGAGCAAGGGAGCCGAGATCTaGTCTGGGTTCATGAAGCTAGAGAGGGCTGCGGCAGAGGCGTTG +
Preference number: 6 (lower is better)
Translates to: KGEGSLWGMSKGAEI*SGFMKLERAAAEAL
Trigger: CAACGCCTCTGCCGCAGCCCTCTCTAGCTTCATGAACCCAGACAAGATCTCGGCTCCCTTGCTCATGCCCCAGAGACTCCCTTCTCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS CAA 90 bp ATCTTGTCTGGGTTCATGAAGCTAGAGAGGGCTGCGGCAGAGGCGTaGAGGCCTGGGTATAGCACTGGCACTGAGGTGGGATACCAGCAC +
Preference number: 6 (lower is better)
Translates to: ILSGFMKLERAAAEA*RPGYSTGTEVGYQH
Trigger: GTGCTGGTATCCCACCTCAGTGCCAGTGCTATACCCAGGCCTCAACGCCTCTGCCGCAGCCCTCTCTAGCTTCATGAACCCAGACAAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS TCA 72 bp TCTGCTCCCCACTCGAGTGAGCGAAAGTCCGCTGGATaGCTGGCACGCAGTTTTTCCCAGGACCTTCCGAAC +
Preference number: 6 (lower is better)
Translates to: SAPHSSERKSAG*LARSFSQDLPN
Trigger: GTTCGGAAGGTCCTGGGAAAAACTGCGTGCCAGTCATCCAGCGGACTTTCGCTCACTCGAGTGGGGAGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256495.4
ENST00000467610.1
CDS TCA 72 bp AGAGCTTGGAGCAAGACAGAAGAGTCGACGGACGGATaGGCTGGCAAGGGAGAAGGGAGTCTCTGGGGCATG +
Preference number: 6 (lower is better)
Translates to: RAWSKTEESTDG*AGKGEGSLWGM
Trigger: CATGCCCCAGAGACTCCCTTCTCCCTTGCCAGCTCATCCGTCCGTCGACTCTTCTGTCTTGCTCCAAGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS GCA 72 bp GTGAACCTGCGTCCGTGGTCACTTTTGAAGCACGGCTaGTCACTGCGCAAGTCGCCCTTCTCCGATTCTCCT +
Preference number: 6 (lower is better)
Translates to: VNLRPWSLLKHG*SLRKSPFSDSP
Trigger: AGGAGAATCGGAGAAGGGCGACTTGCGCAGTGAGCAGCCGTGCTTCAAAAGTGACCACGGACGCAGGTTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256495.4
ENST00000467610.1
CDS CCA 72 bp GCTGCGAAGACTTCAGGTCCCGAGTGTTCTCGTGCTTaGCCAGATACTGAAGCACCTCCCGGGCACATGTCT +
Preference number: 6 (lower is better)
Translates to: AAKTSGPECSRA*PDTEAPPGHMS
Trigger: AGACATGTGCCCGGGAGGTGCTTCAGTATCTGGCCAAGCACGAGAACACTCGGGACCTGAAGTCTTCGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256495.4
ENST00000467610.1
CDS CAA 72 bp CTTTCTCCCATCGTGAACCTGCGTCCGTGGTCACTTTaGAAGCACGGCTGCTCACTGCGCAAGTCGCCCTTC +
Preference number: 6 (lower is better)
Translates to: LSPIVNLRPWSL*KHGCSLRKSPF
Trigger: GAAGGGCGACTTGCGCAGTGAGCAGCCGTGCTTCAAAAGTGACCACGGACGCAGGTTCACGATGGGAGAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS CAA 90 bp GGCTTCGGGGGTCTCTCCGCAGATGTTCCTCTGAGTCTGAGCTCTTaGAAATCCCCTGGGCTGCTGGAATCTTCGGCTTTGAGATGCAGC +
Preference number: 6 (lower is better)
Translates to: GFGGLSADVPLSLSS*KSPGLLESSALRCS
Trigger: GCTGCATCTCAAAGCCGAAGATTCCAGCAGCCCAGGGGATTTCAAAGAGCTCAGACTCAGAGGAACATCTGCGGAGAGACCCCCGAAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256495.4
ENST00000467610.1
CDS CAA 90 bp GAACCTTTGGCCGGAGAGCTGGGTTTTTCCTTGAAGTCCATCACTTaGGGAGCTGGGTCTGATGGCTTCCTGGAGGTACCACCCTGCAGC +
Preference number: 6 (lower is better)
Translates to: EPLAGELGFSLKSIT*GAGSDGFLEVPPCS
Trigger: GCTGCAGGGTGGTACCTCCAGGAAGCCATCAGACCCAGCTCCCAAAGTGATGGACTTCAAGGAAAAACCCAGCTCTCCGGCCAAAGGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256495.4
ENST00000467610.1
CDS TCA 72 bp TTCAGGTCCCGAGTGTTCTCGTGCTTGGCCAGATACTaGAGCACCTCCCGGGCACATGTCTGGAAACCTGAG +
Preference number: 6 (lower is better)
Translates to: FRSRVFSCLARY*STSRAHVWKPE
Trigger: CTCAGGTTTCCAGACATGTGCCCGGGAGGTGCTTCAGTATCTGGCCAAGCACGAGAACACTCGGGACCTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256495.4
ENST00000467610.1
CDS CCA 72 bp TTGGAGCAAGACAGAAGAGTCGACGGACGGATGAGCTaGCAAGGGAGAAGGGAGTCTCTGGGGCATGAGCAA +
Preference number: 6 (lower is better)
Translates to: LEQDRRVDGRMS*QGRRESLGHEQ
Trigger: TTGCTCATGCCCCAGAGACTCCCTTCTCCCTTGCCAGCTCATCCGTCCGTCGACTCTTCTGTCTTGCTCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS CAA 72 bp GCCGGAGAGCTGGGTTTTTCCTTGAAGTCCATCACTTaGGGAGCTGGGTCTGATGGCTTCCTGGAGGTACCA +
Preference number: 6 (lower is better)
Translates to: AGELGFSLKSIT*GAGSDGFLEVP
Trigger: TGGTACCTCCAGGAAGCCATCAGACCCAGCTCCCAAAGTGATGGACTTCAAGGAAAAACCCAGCTCTCCGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256495.4
ENST00000467610.1
CDS CAA 90 bp CGCTGGATGACTGGCACGCAGTTTTTCCCAGGACCTTCCGAACCTTaGGCCGGAGAGCTGGGTTTTTCCTTGAAGTCCATCACTTTGGGA +
Preference number: 6 (lower is better)
Translates to: RWMTGTQFFPGPSEP*AGELGFSLKSITLG
Trigger: TCCCAAAGTGATGGACTTCAAGGAAAAACCCAGCTCTCCGGCCAAAGGTTCGGAAGGTCCTGGGAAAAACTGCGTGCCAGTCATCCAGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000256495.4
ENST00000467610.1
CDS CAA 72 bp GGTCTCTCCGCAGATGTTCCTCTGAGTCTGAGCTCTTaGAAATCCCCTGGGCTGCTGGAATCTTCGGCTTTG +
Preference number: 6 (lower is better)
Translates to: GLSADVPLSLSS*KSPGLLESSAL
Trigger: CAAAGCCGAAGATTCCAGCAGCCCAGGGGATTTCAAAGAGCTCAGACTCAGAGGAACATCTGCGGAGAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256495.4
ENST00000467610.1
CDS CAA 72 bp ACTGGCACGCAGTTTTTCCCAGGACCTTCCGAACCTTaGGCCGGAGAGCTGGGTTTTTCCTTGAAGTCCATC +
Preference number: 6 (lower is better)
Translates to: TGTQFFPGPSEP*AGELGFSLKSI
Trigger: GATGGACTTCAAGGAAAAACCCAGCTCTCCGGCCAAAGGTTCGGAAGGTCCTGGGAAAAACTGCGTGCCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000256495.4
ENST00000467610.1
CDS TCA 72 bp CTCCTTGCTGTCCTCGCTCCGCTTTATTCCCCGTCTTaGCTTGTACACTTGGTACATGTGGGCAGGGTACAT +
Preference number: 6 (lower is better)
Translates to: LLAVLAPLYSPS*LVHLVHVGRVH
Trigger: ATGTACCCTGCCCACATGTACCAAGTGTACAAGTCAAGACGGGGAATAAAGCGGAGCGAGGACAGCAAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256495.4
CDS CCA 72 bp TTTATTCCCCGTCTTGACTTGTACACTTGGTACATGTaGGCAGGGTACATCCCTGGTAGGTCTCCGTGCTCC +
Preference number: 6 (lower is better)
Translates to: FIPRLDLYTWYM*AGYIPGRSPCS
Trigger: GGAGCACGGAGACCTACCAGGGATGTACCCTGCCCACATGTACCAAGTGTACAAGTCAAGACGGGGAATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256495.4
ENST00000467610.1
CDS CCA 72 bp TCGCTCCGCTTTATTCCCCGTCTTGACTTGTACACTTaGTACATGTGGGCAGGGTACATCCCTGGTAGGTCT +
Preference number: 6 (lower is better)
Translates to: SLRFIPRLDLYT*YMWAGYIPGRS
Trigger: AGACCTACCAGGGATGTACCCTGCCCACATGTACCAAGTGTACAAGTCAAGACGGGGAATAAAGCGGAGCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256495.4
ENST00000467610.1
CDS CAA 72 bp TTGCTGTCCTCGCTCCGCTTTATTCCCCGTCTTGACTaGTACACTTGGTACATGTGGGCAGGGTACATCCCT +
Preference number: 6 (lower is better)
Translates to: LLSSLRFIPRLD*YTWYMWAGYIP
Trigger: AGGGATGTACCCTGCCCACATGTACCAAGTGTACAAGTCAAGACGGGGAATAAAGCGGAGCGAGGACAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256495.4
ENST00000467610.1
CDS CAA 90 bp TTGCTTACCTTGCTGTCCTCGCTCCGCTTTATTCCCCGTCTTGACTaGTACACTTGGTACATGTGGGCAGGGTACATCCCTGGTAGGTCT +
Preference number: 6 (lower is better)
Translates to: LLTLLSSLRFIPRLD*YTWYMWAGYIPGRS
Trigger: AGACCTACCAGGGATGTACCCTGCCCACATGTACCAAGTGTACAAGTCAAGACGGGGAATAAAGCGGAGCGAGGACAGCAAGGTAAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467610.1
CDS TCA 72 bp CGGGCACATGTCTGGAAACCTGAGCAGAACATCTCTTaGCCTGTTTCGACATTTCTCCCTGACAGCTCACCA +
Preference number: 6 (lower is better)
Translates to: RAHVWKPEQNIS*PVSTFLPDSSP
Trigger: TGGTGAGCTGTCAGGGAGAAATGTCGAAACAGGTCAAGAGATGTTCTGCTCAGGTTTCCAGACATGTGCCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256495.4
ENST00000467610.1
CDS TCA 72 bp TACCTTGCTGTCCTCGCTCCGCTTTATTCCCCGTCTTaGCTTGTACACTTGGTACATGTGGGCAGGGTACAT +
Preference number: 6 (lower is better)
Translates to: YLAVLAPLYSPS*LVHLVHVGRVH
Trigger: ATGTACCCTGCCCACATGTACCAAGTGTACAAGTCAAGACGGGGAATAAAGCGGAGCGAGGACAGCAAGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467610.1
CDS CCA 72 bp GTAAGTTTGAGATGTTCGGGTAGGAGATCCTTCAGCTaGGCGATGCACTCGTTAATCCGGTCACGTCTCTTT +
Preference number: 6 (lower is better)
Translates to: VSLRCSGRRSFS*AMHSLIRSRLF
Trigger: AAAGAGACGTGACCGGATTAACGAGTGCATCGCCCAGCTGAAGGATCTCCTACCCGAACATCTCAAACTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256495.4
ENST00000460806.1
ENST00000467610.1
CDS TCA 72 bp ATACTGAAGCACCTCCCGGGCACATGTCTGGAAACCTaGGCAGAACATCTCTTGACCTGTTTCGACATTTCT +
Preference number: 6 (lower is better)
Translates to: ILKHLPGTCLET*AEHLLTCFDIS
Trigger: AGAAATGTCGAAACAGGTCAAGAGATGTTCTGCTCAGGTTTCCAGACATGTGCCCGGGAGGTGCTTCAGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256495.4
ENST00000467610.1
CDS GCA 72 bp TGCTTTCACATGCTTCAAGGTAAGTTCAAGAACCACTaGTTTTTCCAAGTGACCCAAAGTTGTAAGTTTGAG +
Preference number: 6 (lower is better)
Translates to: CFHMLQGKFKNH*FFQVTQSCKFE
Trigger: CTCAAACTTACAACTTTGGGTCACTTGGAAAAAGCAGTGGTTCTTGAACTTACCTTGAAGCATGTGAAAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256495.4
ENST00000460806.1
ENST00000467610.1