RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BCO1 (Homo sapiens)

Ensembl gene IDs: ENSG00000135697

Ensembl transcript IDs: ENST00000258168.7, ENST00000563804.5, ENST00000564552.1

Found 267 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GACTCCAAAGCTGTGGTAGTAGCTTGGGGAGAGCAGGGAGCGGGATaGGATGGAGCAGAACACCTCTGTGTGCTTCCAGGGGCTCTTCCC +
Preference number: 1 (lower is better)
Translates to: DSKAVVVAWGEQGAG*DGAEHLCVLPGALP
Trigger: GGGAAGAGCCCCTGGAAGCACACAGAGGTGTTCTGCTCCATCCCATCCCGCTCCCTGCTCTCCCCAAGCTACTACCACAGCTTTGGAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563804.5
3UTR GCA 90 bp CCTGTGGAAAGCCAGGCAGGAGGCCCAGCTCATTCTCCGGATGTATaGGGTTGCCATCTTGAGAATATCCAACCTGAAAGGCTGCTCAAG +
Preference number: 1 (lower is better)
Translates to: PVESQAGGPAHSPDV*GCHLENIQPERLLK
Trigger: CTTGAGCAGCCTTTCAGGTTGGATATTCTCAAGATGGCAACCGCATACATCCGGAGAATGAGCTGGGCCTCCTGCCTGGCTTTCCACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563804.5
3UTR GCA 90 bp GTGTCCCAGTCCATGTCTGTAATGAATAATCCATGGAGATCCATGTaGATATCGACATCAACAGAGGCACGGGCCAATTCCGTAAAGCTT +
Preference number: 1 (lower is better)
Translates to: VSQSMSVMNNPWRSM*ISTSTEARANSVKL
Trigger: AAGCTTTACGGAATTGGCCCGTGCCTCTGTTGATGTCGATATGCACATGGATCTCCATGGATTATTCATTACAGACATGGACTGGGACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563804.5
3UTR-3UTR GCA 90 bp ATCAGGTCAGAGGAGCCCCGTGGCAGTCGGAAGCCCTGTCCCGCTGTTCCTCAGCAGAACACCTCTGTGTaGTTCCAGGGGCTCTTCCCC +
Preference number: 2 (lower is better)
Translates to: IRSEEPRGSRKPCPAVPQQNTSV*FQGLFP
Trigger: GGGGAAGAGCCCCTGGAAGCACACAGAGGTGTTCTG...CTGAGGAACAGCGGGACAGGGCTTCCGACTGCCACGGGGCTCCTCTGACCTGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563804.5
3UTR-3UTR GCA 90 bp GCCCACTTCTGCATTCTTGTCCACGTGGAGGGGCACGGCAAACCTCCTGAGGGTCAGGGGCTCTTCCCCTaGTTCTTGCCCTCTGGTACT +
Preference number: 2 (lower is better)
Translates to: AHFCILVHVEGHGKPPEGQGLFP*FLPSGT
Trigger: AGTACCAGAGGGCAAGAAGCAGGGGAAGAGCCCCTG...ACCCTCAGGAGGTTTGCCGTGCCCCTCCACGTGGACAAGAATGCAGAAGTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563804.5
3UTR-3UTR CCA 90 bp CATCCTTGGCACCTGGCGCGGGCACAAACAGGGGTTCCGCTGGCCAGCAGTCGTGATGGAAGACCACCATaGCGTCTGTGTAAAACTTGG +
Preference number: 2 (lower is better)
Translates to: HPWHLARAQTGVPLASSRDGRPP*RLCKTW
Trigger: CCAAGTTTTACACAGACGCCATGGTGGTCTTCCATC...ACGACTGCTGGCCAGCGGAACCCCTGTTTGTGCCCGCGCCAGGTGCCAAGGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563804.5
3UTR-3UTR CCA 90 bp GAAACATATCCATGGAGTTCTGACAGCCGAGCTCCCCTCCCCTACCCAAACCCCGCATTCTTGTCCACGTaGAGGGGCACGGCAAACCTC +
Preference number: 2 (lower is better)
Translates to: ETYPWSSDSRAPLPYPNPAFLST*RGTANL
Trigger: GAGGTTTGCCGTGCCCCTCCACGTGGACAAGAATGC...GGGGTTTGGGTAGGGGAGGGGAGCTCGGCTGTCAGAACTCCATGGATATGTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000563804.5
3UTR-3UTR GCA 90 bp ATCAGGTCAGAGGAGCCCCGTGGCAGTCGGAAGCCCTGTCCCGCTGTTCCTCAGCCGGATGTATGCGGTTaGCATCTTGAGAATATCCAA +
Preference number: 2 (lower is better)
Translates to: IRSEEPRGSRKPCPAVPQPDVCG*HLENIQ
Trigger: TTGGATATTCTCAAGATGGCAACCGCATACATCCGG...CTGAGGAACAGCGGGACAGGGCTTCCGACTGCCACGGGGCTCCTCTGACCTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563804.5
3UTR-3UTR GCA 90 bp GAAACATATCCATGGAGTTCTGACAGCCGAGCTCCCCTCCCCTACCCAAACCCCTTGGTCTGCACAGGCTaGCTGGTCCTTTGGTCGATG +
Preference number: 2 (lower is better)
Translates to: ETYPWSSDSRAPLPYPNPLVCTG*LVLWSM
Trigger: CATCGACCAAAGGACCAGGCAGCCTGTGCAGACCAA...GGGGTTTGGGTAGGGGAGGGGAGCTCGGCTGTCAGAACTCCATGGATATGTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563804.5
3UTR-3UTR GCA 90 bp GAAACATATCCATGGAGTTCTGACAGCCGAGCTCCCCTCCCCTACCCAAACCCCCAAGCTCTCTTGCCATaGCCTTGTCAAAGCACCCAC +
Preference number: 2 (lower is better)
Translates to: ETYPWSSDSRAPLPYPNPQALLP*PCQSTH
Trigger: GTGGGTGCTTTGACAAGGGCATGGCAAGAGAGCTTG...GGGGTTTGGGTAGGGGAGGGGAGCTCGGCTGTCAGAACTCCATGGATATGTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000258168.7
3UTR-3UTR CCA 90 bp GGGATGGGATGGAGCAGAACACCTCTGTGTGCTTCCAGGGGCTCTTCCCCTGCTAAAGAAACATATCCATaGAGTTCTGACAGCCGAGCT +
Preference number: 2 (lower is better)
Translates to: GMGWSRTPLCASRGSSPAKETYP*SSDSRA
Trigger: AGCTCGGCTGTCAGAACTCCATGGATATGTTTCTTT...AGCAGGGGAAGAGCCCCTGGAAGCACACAGAGGTGTTCTGCTCCATCCCATCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563804.5
3UTR-3UTR GCA 90 bp AGAGGCACGGGCCAATTCCGTAAAGCTTTTGGCATCCAGAATGAGCAGAAAAGGTCTTCCCCTGCTTCTTaGCCTCTGGTACTGTGGCAG +
Preference number: 2 (lower is better)
Translates to: RGTGQFRKAFGIQNEQKRSSPAS*PLVLWQ
Trigger: CTGCCACAGTACCAGAGGGCAAGAAGCAGGGGAAGA...CCTTTTCTGCTCATTCTGGATGCCAAAAGCTTTACGGAATTGGCCCGTGCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563804.5
3UTR-3UTR GCA 90 bp GAAACATATCCATGGAGTTCTGACAGCCGAGCTCCCCTCCCCTACCCAAACCCCCATTCTCCGGATGTATaGGGTTGCCATCTTGAGAAT +
Preference number: 2 (lower is better)
Translates to: ETYPWSSDSRAPLPYPNPHSPDV*GCHLEN
Trigger: ATTCTCAAGATGGCAACCGCATACATCCGGAGAATG...GGGGTTTGGGTAGGGGAGGGGAGCTCGGCTGTCAGAACTCCATGGATATGTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000563804.5
3UTR-3UTR TCA 90 bp CTCTCTTGCCATGCCCTTGTCAAAGCACCCACAGAAAGAATAAGTGCAAAAGGTATATCCATGGAGTTCTaGCAGCCGAGCTCCCCTCCC +
Preference number: 2 (lower is better)
Translates to: LSCHALVKAPTERISAKGISMEF*QPSSPP
Trigger: GGGAGGGGAGCTCGGCTGTCAGAACTCCATGGATAT...ACCTTTTGCACTTATTCTTTCTGTGGGTGCTTTGACAAGGGCATGGCAAGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258168.7
3UTR-3UTR TCA 90 bp AGAGGCACGGGCCAATTCCGTAAAGCTTTTGGCATCCAGAATGAGCAGAAAAGGTGTCCTCGTAGGCAATaGCGTCAAACACGATGCAGC +
Preference number: 2 (lower is better)
Translates to: RGTGQFRKAFGIQNEQKRCPRRQ*RQTRCS
Trigger: GCTGCATCGTGTTTGACGTCATTGCCTACGAGGACA...CCTTTTCTGCTCATTCTGGATGCCAAAAGCTTTACGGAATTGGCCCGTGCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563804.5
3UTR CAA 90 bp TGGCCATCTTCTTCCTTCAGGGCCGTGGCTGTTGTAGATGCCACTTaGATTAAATTTGTGCCCACTTCTGCATTCTTGTCCACGTGGAGG +
Preference number: 2 (lower is better)
Translates to: WPSSSFRAVAVVDAT*IKFVPTSAFLSTWR
Trigger: CCTCCACGTGGACAAGAATGCAGAAGTGGGCACAAATTTAATCAAAGTGGCATCTACAACAGCCACGGCCCTGAAGGAAGAAGATGGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563804.5
3UTR-3UTR TCA 90 bp TGGACTCCACTGAACTCCTGTAGCAAAGACATATCGGTATTGCTTTCCATTGTGATATCCATGGAGTTCTaGCAGCCGAGCTCCCCTCCC +
Preference number: 2 (lower is better)
Translates to: WTPLNSCSKDISVLLSIVISMEF*QPSSPP
Trigger: GGGAGGGGAGCTCGGCTGTCAGAACTCCATGGATAT...CACAATGGAAAGCAATACCGATATGTCTTTGCTACAGGAGTTCAGTGGAGTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563804.5
3UTR-3UTR TCA 90 bp GAGGCCCAGCTCATTCTCCGGATGTATGCGGTTGCCATCTTGAGAATATCCAACATCATAATGGGGATGTaGCGTTGCCAGATTTACCGC +
Preference number: 2 (lower is better)
Translates to: EAQLILRMYAVAILRISNIIMGM*RCQIYR
Trigger: GCGGTAAATCTGGCAACGTCACATCCCCATTATGAT...GTTGGATATTCTCAAGATGGCAACCGCATACATCCGGAGAATGAGCTGGGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563804.5
3UTR-3UTR TCA 90 bp TGGGGATCAGTAGAGACAATGGCTGATAAGATTACTCCGTCATCCTCATCCTTGGCCTGGAGTTCTCCTTaGAGTCCTGGTTCAGGTTGG +
Preference number: 2 (lower is better)
Translates to: WGSVETMADKITPSSSSLAWSSP*SPGSGW
Trigger: CCAACCTGAACCAGGACTTCAAGGAGAACTCCAGGC...CAAGGATGAGGATGACGGAGTAATCTTATCAGCCATTGTCTCTACTGATCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563804.5
3UTR-3UTR TCA 90 bp AGAGGCACGGGCCAATTCCGTAAAGCTTTTGGCATCCAGAATGAGCAGAAAAGGGGGATTGGACTCCACTaGACTCCTGTAGCAAAGACA +
Preference number: 2 (lower is better)
Translates to: RGTGQFRKAFGIQNEQKRGIGLH*TPVAKT
Trigger: TGTCTTTGCTACAGGAGTTCAGTGGAGTCCAATCCC...CCTTTTCTGCTCATTCTGGATGCCAAAAGCTTTACGGAATTGGCCCGTGCCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000563804.5
3UTR-3UTR CCA 90 bp TATTATCTTGGTTGGGATTGGACTCCACTGAACTCCTGTAGCAAAGACATATCGGCTGTGGTAGTAGCTTaGGGAGAGCAGGGAGCGGGA +
Preference number: 2 (lower is better)
Translates to: YYLGWDWTPLNSCSKDISAVVVA*GEQGAG
Trigger: TCCCGCTCCCTGCTCTCCCCAAGCTACTACCACAGC...CGATATGTCTTTGCTACAGGAGTTCAGTGGAGTCCAATCCCAACCAAGATAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563804.5
3UTR-3UTR CCA 90 bp ATGAATAATCCATGGAGATCCATGTGCATATCGACATCAACAGAGGCACGGGCCAGTCCTGGTTCAGGTTaGCCAGGTAGAAGAGCTGGT +
Preference number: 2 (lower is better)
Translates to: MNNPWRSMCISTSTEARASPGSG*PGRRAG
Trigger: ACCAGCTCTTCTACCTGGCCAACCTGAACCAGGACT...GGCCCGTGCCTCTGTTGATGTCGATATGCACATGGATCTCCATGGATTATTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563804.5
3UTR-3UTR CCA 90 bp GAAACATATCCATGGAGTTCTGACAGCCGAGCTCCCCTCCCCTACCCAAACCCCGTAATGAATAATCCATaGAGATCCATGTGCATATCG +
Preference number: 2 (lower is better)
Translates to: ETYPWSSDSRAPLPYPNPVMNNP*RSMCIS
Trigger: CGATATGCACATGGATCTCCATGGATTATTCATTAC...GGGGTTTGGGTAGGGGAGGGGAGCTCGGCTGTCAGAACTCCATGGATATGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563804.5
3UTR-3UTR TCA 90 bp TGGGGATCAGTAGAGACAATGGCTGATAAGATTACTCCGTCATCCTCATCCTTGGATGTAATTGGTCTCTaGGGTCGCGTAGAAGTCTTC +
Preference number: 2 (lower is better)
Translates to: WGSVETMADKITPSSSSLDVIGL*GRVEVF
Trigger: GAAGACTTCTACGCGACCTCAGAGACCAATTACATC...CAAGGATGAGGATGACGGAGTAATCTTATCAGCCATTGTCTCTACTGATCCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563804.5
3UTR-3UTR CCA 90 bp TCTGTAATGAATAATCCATGGAGATCCATGTGCATATCGACATCAACAGAGGCACTGCTTCTTGCCCTCTaGTACTGTGGCAGGGATCTT +
Preference number: 2 (lower is better)
Translates to: SVMNNPWRSMCISTSTEALLLAL*YCGRDL
Trigger: AAGATCCCTGCCACAGTACCAGAGGGCAAGAAGCAG...TGCCTCTGTTGATGTCGATATGCACATGGATCTCCATGGATTATTCATTACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563804.5
3UTR CAA 90 bp CCATGTTTAGAACATTTCCAGCCTCATCATAATGGGGATGTGACGTaGCCAGATTTACCGCCACGTATTTACGATAATCAACCTTCTCCA +
Preference number: 2 (lower is better)
Translates to: PCLEHFQPHHNGDVT*PDLPPRIYDNQPSP
Trigger: TGGAGAAGGTTGATTATCGTAAATACGTGGCGGTAAATCTGGCAACGTCACATCCCCATTATGATGAGGCTGGAAATGTTCTAAACATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563804.5
3UTR-3UTR GCA 90 bp AACTTAACTCATCAGGCCTGGCTAGAAAGTGAGAACTCCCAGATACACAATTTAACTGACAAGCTCTCTTaGCATGCCCTTGTCAAAGCA +
Preference number: 2 (lower is better)
Translates to: NLTHQAWLESENSQIHNLTDKLS*HALVKA
Trigger: TGCTTTGACAAGGGCATGGCAAGAGAGCTTGTCAGT...TAAATTGTGTATCTGGGAGTTCTCACTTTCTAGCCAGGCCTGATGAGTTAAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258168.7
3UTR-3UTR GCA 90 bp TCTGTAATGAATAATCCATGGAGATCCATGTGCATATCGACATCAACAGAGGCAATTTGTGCCCACTTCTaGATTCTTGTCCACGTGGAG +
Preference number: 2 (lower is better)
Translates to: SVMNNPWRSMCISTSTEAICAHF*ILVHVE
Trigger: CTCCACGTGGACAAGAATGCAGAAGTGGGCACAAAT...TGCCTCTGTTGATGTCGATATGCACATGGATCTCCATGGATTATTCATTACAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563804.5
3UTR-3UTR CCA 90 bp GTCAAAGCACCCACAGAAAGAATAAGTGCAAAAGGTAACAAAGGCCCTCCCCTCTTTTATTATCTTGGTTaGGATTGGACTCCACTGAAC +
Preference number: 2 (lower is better)
Translates to: VKAPTERISAKGNKGPPLFYYLG*DWTPLN
Trigger: GTTCAGTGGAGTCCAATCCCAACCAAGATAATAAAA...GAGGGGAGGGCCTTTGTTACCTTTTGCACTTATTCTTTCTGTGGGTGCTTTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563804.5
3UTR-3UTR CCA 90 bp TTTATATTACGCCATGACTTGCATGGAATGACCACAAAGTGGCATAACCTTCCTAAAGAAACATATCCATaGAGTTCTGACAGCCGAGCT +
Preference number: 2 (lower is better)
Translates to: FILRHDLHGMTTKWHNLPKETYP*SSDSRA
Trigger: AGCTCGGCTGTCAGAACTCCATGGATATGTTTCTTT...AGGAAGGTTATGCCACTTTGTGGTCATTCCATGCAAGTCATGGCGTAATATAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258168.7
3UTR CCA 72 bp CCCAAACCCCAACACCATCAGGTCAGAGGAGCCCCGTaGCAGTCGGAAGCCCTGTCCCGCTGTTCCTCAGAA +
Preference number: 3 (lower is better)
Translates to: PKPQHHQVRGAP*QSEALSRCSSE
Trigger: TTCTGAGGAACAGCGGGACAGGGCTTCCGACTGCCACGGGGCTCCTCTGACCTGATGGTGTTGGGGTTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563804.5
3UTR GCA 72 bp AGGGAGCGGGATGGGATGGAGCAGAACACCTCTGTGTaGTTCCAGGGGCTCTTCCCCTGCTTCTTGCCCTCT +
Preference number: 3 (lower is better)
Translates to: RERDGMEQNTSV*FQGLFPCFLPS
Trigger: AGAGGGCAAGAAGCAGGGGAAGAGCCCCTGGAAGCACACAGAGGTGTTCTGCTCCATCCCATCCCGCTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563804.5
3UTR CCA 72 bp GGTAGTAGCTTGGGGAGAGCAGGGAGCGGGATGGGATaGAGCAGAACACCTCTGTGTGCTTCCAGGGGCTCT +
Preference number: 3 (lower is better)
Translates to: GSSLGRAGSGMG*SRTPLCASRGS
Trigger: AGAGCCCCTGGAAGCACACAGAGGTGTTCTGCTCCATCCCATCCCGCTCCCTGCTCTCCCCAAGCTACTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563804.5
3UTR-3UTR CAA 90 bp GAAACATATCCATGGAGTTCTGACAGCCGAGCTCCCCTCCCCTACCCAAACCCCCCCACTTCTGCATTCTaGTCCACGTGGAGGGGCACG +
Preference number: 3 (lower is better)
Translates to: ETYPWSSDSRAPLPYPNPPTSAF*STWRGT
Trigger: CGTGCCCCTCCACGTGGACAAGAATGCAGAAGTGGG...GGGGTTTGGGTAGGGGAGGGGAGCTCGGCTGTCAGAACTCCATGGATATGTTTC
59% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000563804.5
3UTR-3UTR CAA 90 bp AGTAAGTGTGGCGCTAGGGCACGGGATCCAACGGTGTTAGAGGAGGGGCTCCCCCCGACTCTCCCTTTCTaGAGTCAGGAAGTGATGCTG +
Preference number: 3 (lower is better)
Translates to: SKCGARARDPTVLEEGLPPTLPF*SQEVML
Trigger: CAGCATCACTTCCTGACTCAAGAAAGGGAGAGTCGG...GGGGAGCCCCTCCTCTAACACCGTTGGATCCCGTGCCCTAGCGCCACACTTACT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000564552.1
3UTR-3UTR CAA 90 bp GCATCTAGCAGTAAGTGTGGCGCTAGGGCACGGGATCCAACGGTGTTAGAGGAGCCCCTGGTAAGCTGCTaGCAGGCTGAGCAACCTCAC +
Preference number: 3 (lower is better)
Translates to: ASSSKCGARARDPTVLEEPLVSC*QAEQPH
Trigger: GTGAGGTTGCTCAGCCTGCAAGCAGCTTACCAGGGG...CTCCTCTAACACCGTTGGATCCCGTGCCCTAGCGCCACACTTACTGCTAGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564552.1
3UTR-3UTR CAA 90 bp GTCAAAGCACCCACAGAAAGAATAAGTGCAAAAGGTAACAAAGGCCCTCCCCTCCCGTCATCCTCATCCTaGGCACCTGGCGCGGGCACA +
Preference number: 3 (lower is better)
Translates to: VKAPTERISAKGNKGPPLPSSSS*APGAGT
Trigger: TGTGCCCGCGCCAGGTGCCAAGGATGAGGATGACGG...GAGGGGAGGGCCTTTGTTACCTTTTGCACTTATTCTTTCTGTGGGTGCTTTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563804.5
3UTR-3UTR CAA 90 bp CATCCTTGGCACCTGGCGCGGGCACAAACAGGGGTTCCGCTGGCCAGCAGTCGTATTTTATTATCTTGGTaGGGATTGGACTCCACTGAA +
Preference number: 3 (lower is better)
Translates to: HPWHLARAQTGVPLASSRILLSW*GLDSTE
Trigger: TTCAGTGGAGTCCAATCCCAACCAAGATAATAAAAT...ACGACTGCTGGCCAGCGGAACCCCTGTTTGTGCCCGCGCCAGGTGCCAAGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563804.5
3UTR TCA 72 bp CGTCAAACACGATGCAGCCGTCCTCTTCGTAGGCGTTaGCGTGATGGAAGACCACCATGGCGTCTGTGTAAA +
Preference number: 3 (lower is better)
Translates to: RQTRCSRPLRRR*RDGRPPWRLCK
Trigger: TTTACACAGACGCCATGGTGGTCTTCCATCACGTCAACGCCTACGAAGAGGACGGCTGCATCGTGTTTGACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563804.5
3UTR TCA 72 bp AGAAGAGCTGGTAGAGGCTGTTGTCCTCGTAGGCAATaGCGTCAAACACGATGCAGCCGTCCTCTTCGTAGG +
Preference number: 3 (lower is better)
Translates to: RRAGRGCCPRRQ*RQTRCSRPLRR
Trigger: CCTACGAAGAGGACGGCTGCATCGTGTTTGACGTCATTGCCTACGAGGACAACAGCCTCTACCAGCTCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563804.5
3UTR GCA 72 bp GCAGGAGGCCCAGCTCATTCTCCGGATGTATGCGGTTaGCATCTTGAGAATATCCAACCTGAAAGGCTGCTC +
Preference number: 3 (lower is better)
Translates to: AGGPAHSPDVCG*HLENIQPERLL
Trigger: GAGCAGCCTTTCAGGTTGGATATTCTCAAGATGGCAACCGCATACATCCGGAGAATGAGCTGGGCCTCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563804.5
3UTR GCA 72 bp AGCCAGGCAGGAGGCCCAGCTCATTCTCCGGATGTATaGGGTTGCCATCTTGAGAATATCCAACCTGAAAGG +
Preference number: 3 (lower is better)
Translates to: SQAGGPAHSPDV*GCHLENIQPER
Trigger: CCTTTCAGGTTGGATATTCTCAAGATGGCAACCGCATACATCCGGAGAATGAGCTGGGCCTCCTGCCTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563804.5
3UTR-3UTR CAA 90 bp GAAACATATCCATGGAGTTCTGACAGCCGAGCTCCCCTCCCCTACCCAAACCCCTTATCTTGGTTGGGATaGGACTCCACTGAACTCCTG +
Preference number: 3 (lower is better)
Translates to: ETYPWSSDSRAPLPYPNPLSWLG*DSTELL
Trigger: CAGGAGTTCAGTGGAGTCCAATCCCAACCAAGATAA...GGGGTTTGGGTAGGGGAGGGGAGCTCGGCTGTCAGAACTCCATGGATATGTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563804.5
3UTR-3UTR CAA 90 bp GAAACATATCCATGGAGTTCTGACAGCCGAGCTCCCCTCCCCTACCCAAACCCCATATTACGCCATGACTaGCATGGAATGACCACAAAG +
Preference number: 3 (lower is better)
Translates to: ETYPWSSDSRAPLPYPNPILRHD*HGMTTK
Trigger: CTTTGTGGTCATTCCATGCAAGTCATGGCGTAATAT...GGGGTTTGGGTAGGGGAGGGGAGCTCGGCTGTCAGAACTCCATGGATATGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000258168.7
3UTR TCA 72 bp ACTTGGTCTGCACAGGCTGCCTGGTCCTTTGGTCGATaGTGTGGATATAAGTCTTCTCCTCCCTGTGGAAAG +
Preference number: 3 (lower is better)
Translates to: TWSAQAAWSFGR*CGYKSSPPCGK
Trigger: CTTTCCACAGGGAGGAGAAGACTTATATCCACATCATCGACCAAAGGACCAGGCAGCCTGTGCAGACCAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563804.5
3UTR-3UTR CAA 90 bp TCCCAGATACACAATTTAGTCCACCAGAAACATGGGAGGGAGCAAAGGAAAGAGTCTCTTGCCATGCCCTaGTCAAAGCACCCACAGAAA +
Preference number: 3 (lower is better)
Translates to: SQIHNLVHQKHGREQRKESLAMP*SKHPQK
Trigger: TTTCTGTGGGTGCTTTGACAAGGGCATGGCAAGAGA...CTCTTTCCTTTGCTCCCTCCCATGTTTCTGGTGGACTAAATTGTGTATCTGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258168.7
3UTR-3UTR CAA 90 bp TATTATCTTGGTTGGGATTGGACTCCACTGAACTCCTGTAGCAAAGACATATCGAGGCTGCCTGGTCCTTaGGTCGATGATGTGGATATA +
Preference number: 3 (lower is better)
Translates to: YYLGWDWTPLNSCSKDISRLPGP*VDDVDI
Trigger: TATATCCACATCATCGACCAAAGGACCAGGCAGCCT...CGATATGTCTTTGCTACAGGAGTTCAGTGGAGTCCAATCCCAACCAAGATAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563804.5
3UTR-3UTR CAA 90 bp ATGAATAATCCATGGAGATCCATGTGCATATCGACATCAACAGAGGCACGGGCCAATTCCGTAAAGCTTTaGGCATCCAGAATGAGCAGA +
Preference number: 3 (lower is better)
Translates to: MNNPWRSMCISTSTEARANSVKL*ASRMSR
Trigger: TCTGCTCATTCTGGATGCCAAAAGCTTTACGGAATT...GGCCCGTGCCTCTGTTGATGTCGATATGCACATGGATCTCCATGGATTATTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563804.5
3UTR TCA 72 bp AGTCTGTGGGTTGATTTTCCTGATGTAATTGGTCTCTaGGGTCGCGTAGAAGTCTTCTCCGCACTTCATGAT +
Preference number: 3 (lower is better)
Translates to: SLWVDFPDVIGL*GRVEVFSALHD
Trigger: ATCATGAAGTGCGGAGAAGACTTCTACGCGACCTCAGAGACCAATTACATCAGGAAAATCAACCCACAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563804.5
3UTR GCA 72 bp TCCATGTCTGTAATGAATAATCCATGGAGATCCATGTaGATATCGACATCAACAGAGGCACGGGCCAATTCC +
Preference number: 3 (lower is better)
Translates to: SMSVMNNPWRSM*ISTSTEARANS
Trigger: GGAATTGGCCCGTGCCTCTGTTGATGTCGATATGCACATGGATCTCCATGGATTATTCATTACAGACATGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563804.5
3UTR-3UTR CAA 90 bp CATCAGGCCTGGCTAGAAAGTGAGAACTCCCAGATACACAATTTAGTCCACCAGATGGTCAAGGTCTTTTaGTTAAAGGAAAGGAGGTTT +
Preference number: 3 (lower is better)
Translates to: HQAWLESENSQIHNLVHQMVKVF*LKERRF
Trigger: AAACCTCCTTTCCTTTAACAAAAAGACCTTGACCAT...CTGGTGGACTAAATTGTGTATCTGGGAGTTCTCACTTTCTAGCCAGGCCTGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258168.7
3UTR-3UTR CAA 90 bp GTAATGAATAATCCATGGAGATCCATGTGCATATCGACATCAACAGAGGCACGGTATGCGGTTGCCATCTaGAGAATATCCAACCTGAAA +
Preference number: 3 (lower is better)
Translates to: VMNNPWRSMCISTSTEARYAVAI*RISNLK
Trigger: TTTCAGGTTGGATATTCTCAAGATGGCAACCGCATA...CCGTGCCTCTGTTGATGTCGATATGCACATGGATCTCCATGGATTATTCATTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563804.5
3UTR-3UTR CAA 90 bp GTCAAAGCACCCACAGAAAGAATAAGTGCAAAAGGTAACAAAGGCCCTCCCCTCTCATATTTTATTATCTaGGTTGGGATTGGACTCCAC +
Preference number: 3 (lower is better)
Translates to: VKAPTERISAKGNKGPPLSYFII*VGIGLH
Trigger: GTGGAGTCCAATCCCAACCAAGATAATAAAATATGA...GAGGGGAGGGCCTTTGTTACCTTTTGCACTTATTCTTTCTGTGGGTGCTTTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563804.5
3UTR CCA 72 bp TTTGTGTCCCAGTCCATGTCTGTAATGAATAATCCATaGAGATCCATGTGCATATCGACATCAACAGAGGCA +
Preference number: 3 (lower is better)
Translates to: FVSQSMSVMNNP*RSMCISTSTEA
Trigger: TGCCTCTGTTGATGTCGATATGCACATGGATCTCCATGGATTATTCATTACAGACATGGACTGGGACACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563804.5
3UTR TCA 72 bp AGACATATCGGTATTGCTTTCCATTGTGAGCATAATTaGCCCGTGGAAGCTCTAAGCCTTCATAAAGAAATT +
Preference number: 3 (lower is better)
Translates to: RHIGIAFHCEHN*PVEALSLHKEI
Trigger: AATTTCTTTATGAAGGCTTAGAGCTTCCACGGGTCAATTATGCTCACAATGGAAAGCAATACCGATATGTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563804.5
3UTR TCA 72 bp TCATATTTTATTATCTTGGTTGGGATTGGACTCCACTaGACTCCTGTAGCAAAGACATATCGGTATTGCTTT +
Preference number: 3 (lower is better)
Translates to: SYFIILVGIGLH*TPVAKTYRYCF
Trigger: AAAGCAATACCGATATGTCTTTGCTACAGGAGTTCAGTGGAGTCCAATCCCAACCAAGATAATAAAATATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563804.5
CDS-3UTR GCA 90 bp CATCCTTGGCACCTGGCGCGGGCACAAACAGGGGTTCCGCTGGCCAGCAGTCGTGCTGCTCCCTCCTCCTaGGTTTCCTTCCTGCTCTCC +
Preference number: 4 (lower is better)
Translates to: HPWHLARAQTGVPLASSRAAPSS*VSFLLS
Trigger: GGAGAGCAGGAAGGAAACGCAGGAGGAGGGAGCAGC...ACGACTGCTGGCCAGCGGAACCCCTGTTTGTGCCCGCGCCAGGTGCCAAGGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563804.5
CDS-3UTR CCA 90 bp CATCCTTGGCACCTGGCGCGGGCACAAACAGGGGTTCCGCTGGCCAGCAGTCGTGAGCAGGGAGCGGGATaGGATGGAGCAGAACACCTC +
Preference number: 4 (lower is better)
Translates to: HPWHLARAQTGVPLASSREQGAG*DGAEHL
Trigger: GAGGTGTTCTGCTCCATCCCATCCCGCTCCCTGCTC...ACGACTGCTGGCCAGCGGAACCCCTGTTTGTGCCCGCGCCAGGTGCCAAGGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563804.5
CDS-3UTR CCA 90 bp ATCAGGTCAGAGGAGCCCCGTGGCAGTCGGAAGCCCTGTCCCGCTGTTCCTCAGCTCATCCTTGGCACCTaGCGCGGGCACAAACAGGGG +
Preference number: 4 (lower is better)
Translates to: IRSEEPRGSRKPCPAVPQLILGT*RGHKQG
Trigger: CCCCTGTTTGTGCCCGCGCCAGGTGCCAAGGATGAG...CTGAGGAACAGCGGGACAGGGCTTCCGACTGCCACGGGGCTCCTCTGACCTGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563804.5
CDS-3UTR GCA 90 bp AGCTGCTTGCAGGCTGAGCAACCTCACCCCGGCCGTCGCCGACTCTCCCTTTCTGACTCCCCAACTGTGTaGATCCCAGGCCCATTGCGG +
Preference number: 4 (lower is better)
Translates to: SCLQAEQPHPGRRRLSLSDSPTV*IPGPLR
Trigger: CCGCAATGGGCCTGGGATGCACACAGTTGGGGAGTC...AGAAAGGGAGAGTCGGCGACGGCCGGGGTGAGGTTGCTCAGCCTGCAAGCAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564552.1
CDS-3UTR TCA 90 bp CATCCTTGGCACCTGGCGCGGGCACAAACAGGGGTTCCGCTGGCCAGCAGTCGTGCCTGGAGTTCTCCTTaGAGTCCTGGTTCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: HPWHLARAQTGVPLASSRAWSSP*SPGSGW
Trigger: CCAACCTGAACCAGGACTTCAAGGAGAACTCCAGGC...ACGACTGCTGGCCAGCGGAACCCCTGTTTGTGCCCGCGCCAGGTGCCAAGGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563804.5
CDS-3UTR GCA 90 bp CTGAGCAACCTCACCCCGGCCGTCGCCGACTCTCCCTTTCTTGAGTCAGGAAGTGCATCCCAGGCCCATTaGGGAGCAGGGTTCCCTGCA +
Preference number: 4 (lower is better)
Translates to: LSNLTPAVADSPFLESGSASQAH*GAGFPA
Trigger: TGCAGGGAACCCTGCTCCGCAATGGGCCTGGGATGC...ACTTCCTGACTCAAGAAAGGGAGAGTCGGCGACGGCCGGGGTGAGGTTGCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564552.1
CDS-3UTR TCA 90 bp GCATCTAGCAGTAAGTGTGGCGCTAGGGCACGGGATCCAACGGTGTTAGAGGAGAAGCTGCTTGCAGGCTaGGCAACCTCACCCCGGCCG +
Preference number: 4 (lower is better)
Translates to: ASSSKCGARARDPTVLEEKLLAG*ATSPRP
Trigger: CGGCCGGGGTGAGGTTGCTCAGCCTGCAAGCAGCTT...CTCCTCTAACACCGTTGGATCCCGTGCCCTAGCGCCACACTTACTGCTAGATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564552.1
CDS-3UTR GCA 90 bp AGTAAGTGTGGCGCTAGGGCACGGGATCCAACGGTGTTAGAGGAGGGGCTCCCCCCTGCGTTTCCTTCCTaGTCTCCTGCTCCTTCCCTC +
Preference number: 4 (lower is better)
Translates to: SKCGARARDPTVLEEGLPPAFPS*SPAPSL
Trigger: GAGGGAAGGAGCAGGAGAGCAGGAAGGAAACGCAGG...GGGGAGCCCCTCCTCTAACACCGTTGGATCCCGTGCCCTAGCGCCACACTTACT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000564552.1
CDS-3UTR GCA 90 bp AGCTGCTTGCAGGCTGAGCAACCTCACCCCGGCCGTCGCCGACTCTCCCTTTCTGTTCACAGGAGATGCTaGTCCCTCCTCCTGCGTTTC +
Preference number: 4 (lower is better)
Translates to: SCLQAEQPHPGRRRLSLSVHRRC*SLLLRF
Trigger: GAAACGCAGGAGGAGGGAGCAGCATCTCCTGTGAAC...AGAAAGGGAGAGTCGGCGACGGCCGGGGTGAGGTTGCTCAGCCTGCAAGCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564552.1
CDS-3UTR CCA 90 bp CATCCTTGGCACCTGGCGCGGGCACAAACAGGGGTTCCGCTGGCCAGCAGTCGTCTGCTTCTTGCCCTCTaGTACTGTGGCAGGGATCTT +
Preference number: 4 (lower is better)
Translates to: HPWHLARAQTGVPLASSRLLLAL*YCGRDL
Trigger: AAGATCCCTGCCACAGTACCAGAGGGCAAGAAGCAG...ACGACTGCTGGCCAGCGGAACCCCTGTTTGTGCCCGCGCCAGGTGCCAAGGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563804.5
CDS-3UTR TCA 90 bp GCCCACTTCTGCATTCTTGTCCACGTGGAGGGGCACGGCAAACCTCCTGAGGGTATATCCATGGAGTTCTaGCAGCCGAGCTCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: AHFCILVHVEGHGKPPEGISMEF*QPSSPP
Trigger: GGGAGGGGAGCTCGGCTGTCAGAACTCCATGGATAT...ACCCTCAGGAGGTTTGCCGTGCCCCTCCACGTGGACAAGAATGCAGAAGTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563804.5
CDS-3UTR GCA 90 bp ACCTCACCCCGGCCGTCGCCGACTCTCCCTTTCTTGAGTCAGGAAGTGATGCTGCGGAGCAGGGTTCCCTaGAGCCATGCTGGAATCTTG +
Preference number: 4 (lower is better)
Translates to: TSPRPSPTLPFLSQEVMLRSRVP*SHAGIL
Trigger: CAAGATTCCAGCATGGCTGCAGGGAACCCTGCTCCG...CAGCATCACTTCCTGACTCAAGAAAGGGAGAGTCGGCGACGGCCGGGGTGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564552.1
CDS-3UTR GCA 90 bp GAAACATATCCATGGAGTTCTGACAGCCGAGCTCCCCTCCCCTACCCAAACCCCGCATCCCAGGCCCATTaGGGAGCAGGGTTCCCTGCA +
Preference number: 4 (lower is better)
Translates to: ETYPWSSDSRAPLPYPNPASQAH*GAGFPA
Trigger: TGCAGGGAACCCTGCTCCGCAATGGGCCTGGGATGC...GGGGTTTGGGTAGGGGAGGGGAGCTCGGCTGTCAGAACTCCATGGATATGTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258168.7
ENST00000563804.5
CDS-3UTR GCA 90 bp AGCAGTAAGTGTGGCGCTAGGGCACGGGATCCAACGGTGTTAGAGGAGGGGCTCGCTCCCCTGGTAAGCTaGTTGCAGGCTGAGCAACCT +
Preference number: 4 (lower is better)
Translates to: SSKCGARARDPTVLEEGLAPLVS*LQAEQP
Trigger: AGGTTGCTCAGCCTGCAAGCAGCTTACCAGGGGAGC...GAGCCCCTCCTCTAACACCGTTGGATCCCGTGCCCTAGCGCCACACTTACTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564552.1
CDS-3UTR CCA 90 bp GCCCACTTCTGCATTCTTGTCCACGTGGAGGGGCACGGCAAACCTCCTGAGGGTAAACAGGGGTTCCGCTaGCCAGCAGTCGTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: AHFCILVHVEGHGKPPEGKQGFR*PAVVLS
Trigger: AGAGAGGACGACTGCTGGCCAGCGGAACCCCTGTTT...ACCCTCAGGAGGTTTGCCGTGCCCCTCCACGTGGACAAGAATGCAGAAGTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563804.5
CDS-3UTR TCA 90 bp GGGATGGGATGGAGCAGAACACCTCTGTGTGCTTCCAGGGGCTCTTCCCCTGCTTCAGGCAGTTGTCGGTaGAATCGGGGATGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: GMGWSRTPLCASRGSSPASGSCR*NRGWCE
Trigger: CTCACACCATCCCCGATTTCACCGACAACTGCCTGA...AGCAGGGGAAGAGCCCCTGGAAGCACACAGAGGTGTTCTGCTCCATCCCATCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563804.5
CDS-3UTR GCA 90 bp GTGGAAAGCCAGGCAGGAGGCCCAGCTCATTCTCCGGATGTATGCGGTTGCCATCCTGCGTTTCCTTCCTaGTCTCCTGCTCCTTCCCTC +
Preference number: 4 (lower is better)
Translates to: VESQAGGPAHSPDVCGCHPAFPS*SPAPSL
Trigger: GAGGGAAGGAGCAGGAGAGCAGGAAGGAAACGCAGG...ATGGCAACCGCATACATCCGGAGAATGAGCTGGGCCTCCTGCCTGGCTTTCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563804.5
CDS-3UTR GCA 90 bp CGGGCACAAACAGGGGTTCCGCTGGCCAGCAGTCGTCCTCTCTCCATTTTAAGGCGGAGCAGGGTTCCCTaGAGCCATGCTGGAATCTTG +
Preference number: 4 (lower is better)
Translates to: RAQTGVPLASSRPLSILRRSRVP*SHAGIL
Trigger: CAAGATTCCAGCATGGCTGCAGGGAACCCTGCTCCG...CCTTAAAATGGAGAGAGGACGACTGCTGGCCAGCGGAACCCCTGTTTGTGCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563804.5
CDS-3UTR CCA 90 bp TCCAAAGAAACATATCCATGGAGTTCTGACAGCCGAGCTCCCCTCCCCTACCCAGTCAGAGGAGCCCCGTaGCAGTCGGAAGCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: SKETYPWSSDSRAPLPYPVRGAP*QSEALS
Trigger: GGACAGGGCTTCCGACTGCCACGGGGCTCCTCTGAC...TGGGTAGGGGAGGGGAGCTCGGCTGTCAGAACTCCATGGATATGTTTCTTTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258168.7
ENST00000563804.5
CDS-3UTR GCA 90 bp GAAACATATCCATGGAGTTCTGACAGCCGAGCTCCCCTCCCCTACCCAAACCCCCCTGCGTTTCCTTCCTaGTCTCCTGCTCCTTCCCTC +
Preference number: 4 (lower is better)
Translates to: ETYPWSSDSRAPLPYPNPPAFPS*SPAPSL
Trigger: GAGGGAAGGAGCAGGAGAGCAGGAAGGAAACGCAGG...GGGGTTTGGGTAGGGGAGGGGAGCTCGGCTGTCAGAACTCCATGGATATGTTTC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000258168.7
ENST00000563804.5
CDS-3UTR GCA 90 bp ATCAGGTCAGAGGAGCCCCGTGGCAGTCGGAAGCCCTGTCCCGCTGTTCCTCAGATCCATTGCTCAGGGTaGCGAGGGAGATCGATTTTA +
Preference number: 4 (lower is better)
Translates to: IRSEEPRGSRKPCPAVPQIHCSG*RGRSIL
Trigger: TAAAATCGATCTCCCTCGGCACCCTGAGCAATGGAT...CTGAGGAACAGCGGGACAGGGCTTCCGACTGCCACGGGGCTCCTCTGACCTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563804.5
CDS-3UTR GCA 90 bp AGCAGTAAGTGTGGCGCTAGGGCACGGGATCCAACGGTGTTAGAGGAGGGGCTCGCCATGCTGGAATCTTaGCTGTCACTTTGGCCCTCA +
Preference number: 4 (lower is better)
Translates to: SSKCGARARDPTVLEEGLAMLES*LSLWPS
Trigger: TGAGGGCCAAAGTGACAGGCAAGATTCCAGCATGGC...GAGCCCCTCCTCTAACACCGTTGGATCCCGTGCCCTAGCGCCACACTTACTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564552.1
CDS-3UTR CCA 90 bp AGCAGTAAGTGTGGCGCTAGGGCACGGGATCCAACGGTGTTAGAGGAGGGGCTCAGGCCGTCGAACCAATaGTTGTATCTGGACTCCCCA +
Preference number: 4 (lower is better)
Translates to: SSKCGARARDPTVLEEGLRPSNQ*LYLDSP
Trigger: TGGGGAGTCCAGATACAACCATTGGTTCGACGGCCT...GAGCCCCTCCTCTAACACCGTTGGATCCCGTGCCCTAGCGCCACACTTACTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564552.1
CDS-3UTR CCA 90 bp GAAACATATCCATGGAGTTCTGACAGCCGAGCTCCCCTCCCCTACCCAAACCCCGGGAGCGGGATGGGATaGAGCAGAACACCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: ETYPWSSDSRAPLPYPNPGSGMG*SRTPLC
Trigger: ACACAGAGGTGTTCTGCTCCATCCCATCCCGCTCCC...GGGGTTTGGGTAGGGGAGGGGAGCTCGGCTGTCAGAACTCCATGGATATGTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258168.7
ENST00000563804.5
CDS-3UTR CCA 90 bp CCCCTCCATCCAAAGAAACATATCCATGGAGTTCTGACAGCCGAGCTCCCCTCCGCTGTGGTAGTAGCTTaGGGAGAGCAGGGAGCGGGA +
Preference number: 4 (lower is better)
Translates to: PLHPKKHIHGVLTAELPSAVVVA*GEQGAG
Trigger: TCCCGCTCCCTGCTCTCCCCAAGCTACTACCACAGC...GGAGGGGAGCTCGGCTGTCAGAACTCCATGGATATGTTTCTTTGGATGGAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258168.7
ENST00000563804.5
CDS-3UTR CCA 90 bp GGAAGACCACCATGGCGTCTGTGTAAAACTTGGTCTGCACAGGCTGCCTGGTCCGCATTCTTGTCCACGTaGAGGGGCACGGCAAACCTC +
Preference number: 4 (lower is better)
Translates to: GRPPWRLCKTWSAQAAWSAFLST*RGTANL
Trigger: GAGGTTTGCCGTGCCCCTCCACGTGGACAAGAATGC...GGACCAGGCAGCCTGTGCAGACCAAGTTTTACACAGACGCCATGGTGGTCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563804.5
CDS-3UTR TCA 90 bp GGGATGGGATGGAGCAGAACACCTCTGTGTGCTTCCAGGGGCTCTTCCCCTGCTGGGATTGGACTCCACTaGACTCCTGTAGCAAAGACA +
Preference number: 4 (lower is better)
Translates to: GMGWSRTPLCASRGSSPAGIGLH*TPVAKT
Trigger: TGTCTTTGCTACAGGAGTTCAGTGGAGTCCAATCCC...AGCAGGGGAAGAGCCCCTGGAAGCACACAGAGGTGTTCTGCTCCATCCCATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563804.5
CDS-3UTR GCA 90 bp CCCCTCCATCCAAAGAAACATATCCATGGAGTTCTGACAGCCGAGCTCCCCTCCCAGGGGCTCTTCCCCTaGTTCTTGCCCTCTGGTACT +
Preference number: 4 (lower is better)
Translates to: PLHPKKHIHGVLTAELPSQGLFP*FLPSGT
Trigger: AGTACCAGAGGGCAAGAAGCAGGGGAAGAGCCCCTG...GGAGGGGAGCTCGGCTGTCAGAACTCCATGGATATGTTTCTTTGGATGGAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000258168.7
ENST00000563804.5
CDS-3UTR GCA 90 bp GCTTGCAGGCTGAGCAACCTCACCCCGGCCGTCGCCGACTCTCCCTTTCTTGAGAAACAACACAGTCCCTaGCTAGCATCTAGCAGTAAG +
Preference number: 4 (lower is better)
Translates to: ACRLSNLTPAVADSPFLEKQHSP*LASSSK
Trigger: CTTACTGCTAGATGCTAGGCAGGGACTGTGTTGTTT...CTCAAGAAAGGGAGAGTCGGCGACGGCCGGGGTGAGGTTGCTCAGCCTGCAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564552.1
CDS-3UTR CCA 90 bp AGCAGTAAGTGTGGCGCTAGGGCACGGGATCCAACGGTGTTAGAGGAGGGGCTCTCCCTGCAGCCATGCTaGAATCTTGCCTGTCACTTT +
Preference number: 4 (lower is better)
Translates to: SSKCGARARDPTVLEEGLSLQPC*NLACHF
Trigger: AAAGTGACAGGCAAGATTCCAGCATGGCTGCAGGGA...GAGCCCCTCCTCTAACACCGTTGGATCCCGTGCCCTAGCGCCACACTTACTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564552.1
CDS-3UTR CCA 90 bp CCCCTCCATCCAAAGAAACATATCCATGGAGTTCTGACAGCCGAGCTCCCCTCCGGGAGCGGGATGGGATaGAGCAGAACACCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: PLHPKKHIHGVLTAELPSGSGMG*SRTPLC
Trigger: ACACAGAGGTGTTCTGCTCCATCCCATCCCGCTCCC...GGAGGGGAGCTCGGCTGTCAGAACTCCATGGATATGTTTCTTTGGATGGAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258168.7
ENST00000563804.5
CDS-3UTR TCA 90 bp GCATCTAGCAGTAAGTGTGGCGCTAGGGCACGGGATCCAACGGTGTTAGAGGAGCATCTCTGTCTCTCCTaGTGCCGTTTCTGCCTTTGC +
Preference number: 4 (lower is better)
Translates to: ASSSKCGARARDPTVLEEHLCLS*CRFCLC
Trigger: GCAAAGGCAGAAACGGCATCAGGAGAGACAGAGATG...CTCCTCTAACACCGTTGGATCCCGTGCCCTAGCGCCACACTTACTGCTAGATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564552.1
CDS-3UTR TCA 90 bp AGCAGTAAGTGTGGCGCTAGGGCACGGGATCCAACGGTGTTAGAGGAGGGGCTCGATGTAATTGGTCTCTaGGGTCGCGTAGAAGTCTTC +
Preference number: 4 (lower is better)
Translates to: SSKCGARARDPTVLEEGLDVIGL*GRVEVF
Trigger: GAAGACTTCTACGCGACCTCAGAGACCAATTACATC...GAGCCCCTCCTCTAACACCGTTGGATCCCGTGCCCTAGCGCCACACTTACTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564552.1
CDS-3UTR TCA 90 bp GGCCCTCCCCTCCATCCAAAGAAACATATCCATGGAGTTCTGACAGCCGAGCTCCCTCTTCGTAGGCGTTaGCGTGATGGAAGACCACCA +
Preference number: 4 (lower is better)
Translates to: GPPLHPKKHIHGVLTAELPLRRR*RDGRPP
Trigger: TGGTGGTCTTCCATCACGTCAACGCCTACGAAGAGG...GAGCTCGGCTGTCAGAACTCCATGGATATGTTTCTTTGGATGGAGGGGAGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258168.7
ENST00000563804.5
CDS-3UTR GCA 90 bp GGCACGGGATCCAACGGTGTTAGAGGAGGGGCTCCCCTGGTAAGCTGCTTGCAGTTAACAGCAAACAGGTaGTCCTCTGTGTTCACAGGA +
Preference number: 4 (lower is better)
Translates to: GTGSNGVRGGAPLVSCLQLTANR*SSVFTG
Trigger: TCCTGTGAACACAGAGGAGCACCTGTTTGCTGTTAA...CTGCAAGCAGCTTACCAGGGGAGCCCCTCCTCTAACACCGTTGGATCCCGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564552.1
CDS-3UTR GCA 90 bp AGCAGTAAGTGTGGCGCTAGGGCACGGGATCCAACGGTGTTAGAGGAGGGGCTCATCCATTGCTCAGGGTaGCGAGGGAGATCGATTTTA +
Preference number: 4 (lower is better)
Translates to: SSKCGARARDPTVLEEGLIHCSG*RGRSIL
Trigger: TAAAATCGATCTCCCTCGGCACCCTGAGCAATGGAT...GAGCCCCTCCTCTAACACCGTTGGATCCCGTGCCCTAGCGCCACACTTACTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564552.1
CDS-3UTR GCA 90 bp AGCTGCTTGCAGGCTGAGCAACCTCACCCCGGCCGTCGCCGACTCTCCCTTTCTAAATATTATATCCATTaGTCAGGGTGCCGAGGGAGA +
Preference number: 4 (lower is better)
Translates to: SCLQAEQPHPGRRRLSLSKYYIH*SGCRGR
Trigger: TCTCCCTCGGCACCCTGAGCAATGGATATAATATTT...AGAAAGGGAGAGTCGGCGACGGCCGGGGTGAGGTTGCTCAGCCTGCAAGCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564552.1
CDS-3UTR GCA 90 bp AGCTGCTTGCAGGCTGAGCAACCTCACCCCGGCCGTCGCCGACTCTCCCTTTCTCGCTTCTCAGGTATTTaGTCCTGTAATAGACTTCAC +
Preference number: 4 (lower is better)
Translates to: SCLQAEQPHPGRRRLSLSRFSGI*SCNRLH
Trigger: GTGAAGTCTATTACAGGAGCAAATACCTGAGAAGCG...AGAAAGGGAGAGTCGGCGACGGCCGGGGTGAGGTTGCTCAGCCTGCAAGCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564552.1
CDS-3UTR GCA 90 bp GGCACAAACAGGGGTTCCGCTGGCCAGCAGTCGTCCTCTCTCCATTTTAAGGATTCTTCCCCTGCTTCTTaGCCTCTGGTACTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: GTNRGSAGQQSSSLHFKDSSPAS*PLVLWQ
Trigger: CTGCCACAGTACCAGAGGGCAAGAAGCAGGGGAAGA...ATCCTTAAAATGGAGAGAGGACGACTGCTGGCCAGCGGAACCCCTGTTTGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563804.5
CDS-3UTR GCA 90 bp TCCAAAGAAACATATCCATGGAGTTCTGACAGCCGAGCTCCCCTCCCCTACCCACAGAACACCTCTGTGTaGTTCCAGGGGCTCTTCCCC +
Preference number: 4 (lower is better)
Translates to: SKETYPWSSDSRAPLPYPQNTSV*FQGLFP
Trigger: GGGGAAGAGCCCCTGGAAGCACACAGAGGTGTTCTG...TGGGTAGGGGAGGGGAGCTCGGCTGTCAGAACTCCATGGATATGTTTCTTTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258168.7
ENST00000563804.5
CDS-3UTR GCA 90 bp CCCCTCCATCCAAAGAAACATATCCATGGAGTTCTGACAGCCGAGCTCCCCTCCTTGGTCTGCACAGGCTaGCTGGTCCTTTGGTCGATG +
Preference number: 4 (lower is better)
Translates to: PLHPKKHIHGVLTAELPSLVCTG*LVLWSM
Trigger: CATCGACCAAAGGACCAGGCAGCCTGTGCAGACCAA...GGAGGGGAGCTCGGCTGTCAGAACTCCATGGATATGTTTCTTTGGATGGAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258168.7
ENST00000563804.5
CDS-3UTR CCA 90 bp TCCAAAGAAACATATCCATGGAGTTCTGACAGCCGAGCTCCCCTCCCCTACCCAGCATTCTTGTCCACGTaGAGGGGCACGGCAAACCTC +
Preference number: 4 (lower is better)
Translates to: SKETYPWSSDSRAPLPYPAFLST*RGTANL
Trigger: GAGGTTTGCCGTGCCCCTCCACGTGGACAAGAATGC...TGGGTAGGGGAGGGGAGCTCGGCTGTCAGAACTCCATGGATATGTTTCTTTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258168.7
ENST00000563804.5
CDS-3UTR CCA 90 bp GTCAAAGCACCCACAGAAAGAATAAGTGCAAAAGGTAACAAAGGCCCTCCCCTCGTCAGAGGAGCCCCGTaGCAGTCGGAAGCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: VKAPTERISAKGNKGPPLVRGAP*QSEALS
Trigger: GGACAGGGCTTCCGACTGCCACGGGGCTCCTCTGAC...GAGGGGAGGGCCTTTGTTACCTTTTGCACTTATTCTTTCTGTGGGTGCTTTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258168.7
ENST00000563804.5
CDS-3UTR TCA 90 bp GGCCCTCCCCTCCATCCAAAGAAACATATCCATGGAGTTCTGACAGCCGAGCTCTGTCCTCGTAGGCAATaGCGTCAAACACGATGCAGC +
Preference number: 4 (lower is better)
Translates to: GPPLHPKKHIHGVLTAELCPRRQ*RQTRCS
Trigger: GCTGCATCGTGTTTGACGTCATTGCCTACGAGGACA...GAGCTCGGCTGTCAGAACTCCATGGATATGTTTCTTTGGATGGAGGGGAGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258168.7
ENST00000563804.5
CDS-3UTR GCA 90 bp GTCAAAGCACCCACAGAAAGAATAAGTGCAAAAGGTAACAAAGGCCCTCCCCTCGCATCCCAGGCCCATTaGGGAGCAGGGTTCCCTGCA +
Preference number: 4 (lower is better)
Translates to: VKAPTERISAKGNKGPPLASQAH*GAGFPA
Trigger: TGCAGGGAACCCTGCTCCGCAATGGGCCTGGGATGC...GAGGGGAGGGCCTTTGTTACCTTTTGCACTTATTCTTTCTGTGGGTGCTTTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258168.7
ENST00000563804.5
CDS-3UTR GCA 90 bp GTGGAAAGCCAGGCAGGAGGCCCAGCTCATTCTCCGGATGTATGCGGTTGCCATATTTGTGCCCACTTCTaGATTCTTGTCCACGTGGAG +
Preference number: 4 (lower is better)
Translates to: VESQAGGPAHSPDVCGCHICAHF*ILVHVE
Trigger: CTCCACGTGGACAAGAATGCAGAAGTGGGCACAAAT...ATGGCAACCGCATACATCCGGAGAATGAGCTGGGCCTCCTGCCTGGCTTTCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563804.5
CDS-3UTR GCA 90 bp GGGATGGGATGGAGCAGAACACCTCTGTGTGCTTCCAGGGGCTCTTCCCCTGCTCCATGGAGATCCATGTaGATATCGACATCAACAGAG +
Preference number: 4 (lower is better)
Translates to: GMGWSRTPLCASRGSSPAPWRSM*ISTSTE
Trigger: CTCTGTTGATGTCGATATGCACATGGATCTCCATGG...AGCAGGGGAAGAGCCCCTGGAAGCACACAGAGGTGTTCTGCTCCATCCCATCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563804.5
CDS-3UTR GCA 90 bp CCCCTCCATCCAAAGAAACATATCCATGGAGTTCTGACAGCCGAGCTCCCCTCCCAAGCTCTCTTGCCATaGCCTTGTCAAAGCACCCAC +
Preference number: 4 (lower is better)
Translates to: PLHPKKHIHGVLTAELPSQALLP*PCQSTH
Trigger: GTGGGTGCTTTGACAAGGGCATGGCAAGAGAGCTTG...GGAGGGGAGCTCGGCTGTCAGAACTCCATGGATATGTTTCTTTGGATGGAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258168.7
CDS-3UTR CCA 90 bp CCCCTCCATCCAAAGAAACATATCCATGGAGTTCTGACAGCCGAGCTCCCCTCCAGTCCTGGTTCAGGTTaGCCAGGTAGAAGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: PLHPKKHIHGVLTAELPSSPGSG*PGRRAG
Trigger: ACCAGCTCTTCTACCTGGCCAACCTGAACCAGGACT...GGAGGGGAGCTCGGCTGTCAGAACTCCATGGATATGTTTCTTTGGATGGAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258168.7
ENST00000563804.5
CDS-3UTR TCA 90 bp GAAACATATCCATGGAGTTCTGACAGCCGAGCTCCCCTCCCCTACCCAAACCCCGATGTAATTGGTCTCTaGGGTCGCGTAGAAGTCTTC +
Preference number: 4 (lower is better)
Translates to: ETYPWSSDSRAPLPYPNPDVIGL*GRVEVF
Trigger: GAAGACTTCTACGCGACCTCAGAGACCAATTACATC...GGGGTTTGGGTAGGGGAGGGGAGCTCGGCTGTCAGAACTCCATGGATATGTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258168.7
ENST00000563804.5
CDS-3UTR TCA 90 bp GGCCCTCCCCTCCATCCAAAGAAACATATCCATGGAGTTCTGACAGCCGAGCTCGGGATTGGACTCCACTaGACTCCTGTAGCAAAGACA +
Preference number: 4 (lower is better)
Translates to: GPPLHPKKHIHGVLTAELGIGLH*TPVAKT
Trigger: TGTCTTTGCTACAGGAGTTCAGTGGAGTCCAATCCC...GAGCTCGGCTGTCAGAACTCCATGGATATGTTTCTTTGGATGGAGGGGAGGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258168.7
ENST00000563804.5
CDS-3UTR TCA 90 bp ACCTCACCCCGGCCGTCGCCGACTCTCCCTTTCTTGAGTCAGGAAGTGATGCTGTGGTTACATATGTGTTaGTACCTTCTCCAGGGTTTC +
Preference number: 4 (lower is better)
Translates to: TSPRPSPTLPFLSQEVMLWLHMC*YLLQGF
Trigger: GAAACCCTGGAGAAGGTATCAACACATATGTAACCA...CAGCATCACTTCCTGACTCAAGAAAGGGAGAGTCGGCGACGGCCGGGGTGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564552.1
CDS-3UTR CCA 90 bp GGCCCTCCCCTCCATCCAAAGAAACATATCCATGGAGTTCTGACAGCCGAGCTCTCCCTGCAGCCATGCTaGAATCTTGCCTGTCACTTT +
Preference number: 4 (lower is better)
Translates to: GPPLHPKKHIHGVLTAELSLQPC*NLACHF
Trigger: AAAGTGACAGGCAAGATTCCAGCATGGCTGCAGGGA...GAGCTCGGCTGTCAGAACTCCATGGATATGTTTCTTTGGATGGAGGGGAGGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258168.7
ENST00000563804.5
CDS-3UTR CCA 90 bp TCCAAAGAAACATATCCATGGAGTTCTGACAGCCGAGCTCCCCTCCCCTACCCAAGGCCGTCGAACCAATaGTTGTATCTGGACTCCCCA +
Preference number: 4 (lower is better)
Translates to: SKETYPWSSDSRAPLPYPRPSNQ*LYLDSP
Trigger: TGGGGAGTCCAGATACAACCATTGGTTCGACGGCCT...TGGGTAGGGGAGGGGAGCTCGGCTGTCAGAACTCCATGGATATGTTTCTTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258168.7
ENST00000563804.5
CDS-3UTR CCA 90 bp AGTAAGTGTGGCGCTAGGGCACGGGATCCAACGGTGTTAGAGGAGGGGCTCCCCTGTTTGCCTCAATATTaGTGTTGTAGGTATCGCTTC +
Preference number: 4 (lower is better)
Translates to: SKCGARARDPTVLEEGLPCLPQY*CCRYRF
Trigger: GAAGCGATACCTACAACACCAATATTGAGGCAAACA...GGGGAGCCCCTCCTCTAACACCGTTGGATCCCGTGCCCTAGCGCCACACTTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564552.1
CDS-3UTR TCA 90 bp GAGGCCCAGCTCATTCTCCGGATGTATGCGGTTGCCATCTTGAGAATATCCAACCATCTCTGTCTCTCCTaGTGCCGTTTCTGCCTTTGC +
Preference number: 4 (lower is better)
Translates to: EAQLILRMYAVAILRISNHLCLS*CRFCLC
Trigger: GCAAAGGCAGAAACGGCATCAGGAGAGACAGAGATG...GTTGGATATTCTCAAGATGGCAACCGCATACATCCGGAGAATGAGCTGGGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563804.5
CDS-3UTR GCA 90 bp GATACTGACAAGCTCTCTTGCCATGCCCTTGTCAAAGCACCCACAGAAAGAATAGACTCCCCAACTGTGTaGATCCCAGGCCCATTGCGG +
Preference number: 4 (lower is better)
Translates to: DTDKLSCHALVKAPTERIDSPTV*IPGPLR
Trigger: CCGCAATGGGCCTGGGATGCACACAGTTGGGGAGTC...TATTCTTTCTGTGGGTGCTTTGACAAGGGCATGGCAAGAGAGCTTGTCAGTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258168.7
CDS-3UTR GCA 90 bp TGGGGATCAGTAGAGACAATGGCTGATAAGATTACTCCGTCATCCTCATCCTTGGACTCCCCAACTGTGTaGATCCCAGGCCCATTGCGG +
Preference number: 4 (lower is better)
Translates to: WGSVETMADKITPSSSSLDSPTV*IPGPLR
Trigger: CCGCAATGGGCCTGGGATGCACACAGTTGGGGAGTC...CAAGGATGAGGATGACGGAGTAATCTTATCAGCCATTGTCTCTACTGATCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563804.5
CDS-3UTR CCA 90 bp TCCCAGATACACAATTTAGTCCACCAGAAACATGGGAGGGAGCAAAGGAAAGAGGAGCAGGGAGCGGGATaGGATGGAGCAGAACACCTC +
Preference number: 4 (lower is better)
Translates to: SQIHNLVHQKHGREQRKEEQGAG*DGAEHL
Trigger: GAGGTGTTCTGCTCCATCCCATCCCGCTCCCTGCTC...CTCTTTCCTTTGCTCCCTCCCATGTTTCTGGTGGACTAAATTGTGTATCTGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258168.7
CDS-3UTR CCA 90 bp CCCCTCCATCCAAAGAAACATATCCATGGAGTTCTGACAGCCGAGCTCCCCTCCGATGGAAGACCACCATaGCGTCTGTGTAAAACTTGG +
Preference number: 4 (lower is better)
Translates to: PLHPKKHIHGVLTAELPSDGRPP*RLCKTW
Trigger: CCAAGTTTTACACAGACGCCATGGTGGTCTTCCATC...GGAGGGGAGCTCGGCTGTCAGAACTCCATGGATATGTTTCTTTGGATGGAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258168.7
ENST00000563804.5
CDS-3UTR CCA 90 bp GAAACATATCCATGGAGTTCTGACAGCCGAGCTCCCCTCCCCTACCCAAACCCCTATCTTGGTTGGGATTaGACTCCACTGAACTCCTGT +
Preference number: 4 (lower is better)
Translates to: ETYPWSSDSRAPLPYPNPYLGWD*TPLNSC
Trigger: ACAGGAGTTCAGTGGAGTCCAATCCCAACCAAGATA...GGGGTTTGGGTAGGGGAGGGGAGCTCGGCTGTCAGAACTCCATGGATATGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258168.7
ENST00000563804.5
CDS-3UTR CCA 90 bp GGCCCTCCCCTCCATCCAAAGAAACATATCCATGGAGTTCTGACAGCCGAGCTCAGTCCACCAGAAACATaGGAGGGAGCAAAGGAAAGA +
Preference number: 4 (lower is better)
Translates to: GPPLHPKKHIHGVLTAELSPPET*EGAKER
Trigger: TCTTTCCTTTGCTCCCTCCCATGTTTCTGGTGGACT...GAGCTCGGCTGTCAGAACTCCATGGATATGTTTCTTTGGATGGAGGGGAGGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258168.7
CDS-3UTR TCA 90 bp TCCAAAGAAACATATCCATGGAGTTCTGACAGCCGAGCTCCCCTCCCCTACCCAATCATAATGGGGATGTaGCGTTGCCAGATTTACCGC +
Preference number: 4 (lower is better)
Translates to: SKETYPWSSDSRAPLPYPIIMGM*RCQIYR
Trigger: GCGGTAAATCTGGCAACGTCACATCCCCATTATGAT...TGGGTAGGGGAGGGGAGCTCGGCTGTCAGAACTCCATGGATATGTTTCTTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258168.7
ENST00000563804.5
CDS-3UTR TCA 90 bp GTCAAAGCACCCACAGAAAGAATAAGTGCAAAAGGTAACAAAGGCCCTCCCCTCGCCTGGAGTTCTCCTTaGAGTCCTGGTTCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: VKAPTERISAKGNKGPPLAWSSP*SPGSGW
Trigger: CCAACCTGAACCAGGACTTCAAGGAGAACTCCAGGC...GAGGGGAGGGCCTTTGTTACCTTTTGCACTTATTCTTTCTGTGGGTGCTTTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258168.7
ENST00000563804.5
CDS-3UTR GCA 90 bp GTCAAAGCACCCACAGAAAGAATAAGTGCAAAAGGTAACAAAGGCCCTCCCCTCGTTCACAGGAGATGCTaGTCCCTCCTCCTGCGTTTC +
Preference number: 4 (lower is better)
Translates to: VKAPTERISAKGNKGPPLVHRRC*SLLLRF
Trigger: GAAACGCAGGAGGAGGGAGCAGCATCTCCTGTGAAC...GAGGGGAGGGCCTTTGTTACCTTTTGCACTTATTCTTTCTGTGGGTGCTTTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258168.7
ENST00000563804.5
CDS-3UTR GCA 90 bp AGTCCTGGTTCAGGTTGGCCAGGTAGAAGAGCTGGTAGAGGCTGTTGTCCTCGTTTAACAGCAAACAGGTaGTCCTCTGTGTTCACAGGA +
Preference number: 4 (lower is better)
Translates to: SPGSGWPGRRAGRGCCPRLTANR*SSVFTG
Trigger: TCCTGTGAACACAGAGGAGCACCTGTTTGCTGTTAA...ACGAGGACAACAGCCTCTACCAGCTCTTCTACCTGGCCAACCTGAACCAGGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563804.5
CDS-3UTR GCA 90 bp CAAGCTCTCTTGCCATGCCCTTGTCAAAGCACCCACAGAAAGAATAAGTGCAAACGGAGCAGGGTTCCCTaGAGCCATGCTGGAATCTTG +
Preference number: 4 (lower is better)
Translates to: QALLPCPCQSTHRKNKCKRSRVP*SHAGIL
Trigger: CAAGATTCCAGCATGGCTGCAGGGAACCCTGCTCCG...TTTGCACTTATTCTTTCTGTGGGTGCTTTGACAAGGGCATGGCAAGAGAGCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258168.7
CDS-3UTR GCA 90 bp CAGCTCATTCTCCGGATGTATGCGGTTGCCATCTTGAGAATATCCAACCTGAAACAGGGGCTCTTCCCCTaGTTCTTGCCCTCTGGTACT +
Preference number: 4 (lower is better)
Translates to: QLILRMYAVAILRISNLKQGLFP*FLPSGT
Trigger: AGTACCAGAGGGCAAGAAGCAGGGGAAGAGCCCCTG...TTTCAGGTTGGATATTCTCAAGATGGCAACCGCATACATCCGGAGAATGAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563804.5
CDS-3UTR CCA 90 bp CTCTCTTGCCATGCCCTTGTCAAAGCACCCACAGAAAGAATAAGTGCAAAAGGTAAACAGGGGTTCCGCTaGCCAGCAGTCGTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: LSCHALVKAPTERISAKGKQGFR*PAVVLS
Trigger: AGAGAGGACGACTGCTGGCCAGCGGAACCCCTGTTT...ACCTTTTGCACTTATTCTTTCTGTGGGTGCTTTGACAAGGGCATGGCAAGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258168.7
CDS-3UTR CCA 90 bp GGCCCTCCCCTCCATCCAAAGAAACATATCCATGGAGTTCTGACAGCCGAGCTCTTAACTCATCAGGCCTaGCTAGAAAGTGAGAACTCC +
Preference number: 4 (lower is better)
Translates to: GPPLHPKKHIHGVLTAELLTHQA*LESENS
Trigger: GGAGTTCTCACTTTCTAGCCAGGCCTGATGAGTTAA...GAGCTCGGCTGTCAGAACTCCATGGATATGTTTCTTTGGATGGAGGGGAGGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258168.7
CDS-3UTR TCA 90 bp GATACTGACAAGCTCTCTTGCCATGCCCTTGTCAAAGCACCCACAGAAAGAATATCAGGCAGTTGTCGGTaGAATCGGGGATGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: DTDKLSCHALVKAPTERISGSCR*NRGWCE
Trigger: CTCACACCATCCCCGATTTCACCGACAACTGCCTGA...TATTCTTTCTGTGGGTGCTTTGACAAGGGCATGGCAAGAGAGCTTGTCAGTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258168.7
CDS-3UTR TCA 90 bp GGCCCTCCCCTCCATCCAAAGAAACATATCCATGGAGTTCTGACAGCCGAGCTCTGGTCCTTTGGTCGATaGTGTGGATATAAGTCTTCT +
Preference number: 4 (lower is better)
Translates to: GPPLHPKKHIHGVLTAELWSFGR*CGYKSS
Trigger: AGAAGACTTATATCCACATCATCGACCAAAGGACCA...GAGCTCGGCTGTCAGAACTCCATGGATATGTTTCTTTGGATGGAGGGGAGGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258168.7
ENST00000563804.5
CDS-3UTR TCA 90 bp GGCACAAACAGGGGTTCCGCTGGCCAGCAGTCGTCCTCTCTCCATTTTAAGGATTGGTCCTTTGGTCGATaGTGTGGATATAAGTCTTCT +
Preference number: 4 (lower is better)
Translates to: GTNRGSAGQQSSSLHFKDWSFGR*CGYKSS
Trigger: AGAAGACTTATATCCACATCATCGACCAAAGGACCA...ATCCTTAAAATGGAGAGAGGACGACTGCTGGCCAGCGGAACCCCTGTTTGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563804.5
CDS-3UTR GCA 90 bp TGGGGATCAGTAGAGACAATGGCTGATAAGATTACTCCGTCATCCTCATCCTTGGTTCACAGGAGATGCTaGTCCCTCCTCCTGCGTTTC +
Preference number: 4 (lower is better)
Translates to: WGSVETMADKITPSSSSLVHRRC*SLLLRF
Trigger: GAAACGCAGGAGGAGGGAGCAGCATCTCCTGTGAAC...CAAGGATGAGGATGACGGAGTAATCTTATCAGCCATTGTCTCTACTGATCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563804.5
CDS-3UTR GCA 90 bp TCCAAAGAAACATATCCATGGAGTTCTGACAGCCGAGCTCCCCTCCCCTACCCATTAACAGCAAACAGGTaGTCCTCTGTGTTCACAGGA +
Preference number: 4 (lower is better)
Translates to: SKETYPWSSDSRAPLPYPLTANR*SSVFTG
Trigger: TCCTGTGAACACAGAGGAGCACCTGTTTGCTGTTAA...TGGGTAGGGGAGGGGAGCTCGGCTGTCAGAACTCCATGGATATGTTTCTTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258168.7
ENST00000563804.5
CDS-3UTR GCA 90 bp GTCAAAGCACCCACAGAAAGAATAAGTGCAAAAGGTAACAAAGGCCCTCCCCTCGCCATGCTGGAATCTTaGCTGTCACTTTGGCCCTCA +
Preference number: 4 (lower is better)
Translates to: VKAPTERISAKGNKGPPLAMLES*LSLWPS
Trigger: TGAGGGCCAAAGTGACAGGCAAGATTCCAGCATGGC...GAGGGGAGGGCCTTTGTTACCTTTTGCACTTATTCTTTCTGTGGGTGCTTTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258168.7
ENST00000563804.5
CDS-3UTR GCA 90 bp CCCCTCCATCCAAAGAAACATATCCATGGAGTTCTGACAGCCGAGCTCCCCTCCCGCTTCTCAGGTATTTaGTCCTGTAATAGACTTCAC +
Preference number: 4 (lower is better)
Translates to: PLHPKKHIHGVLTAELPSRFSGI*SCNRLH
Trigger: GTGAAGTCTATTACAGGAGCAAATACCTGAGAAGCG...GGAGGGGAGCTCGGCTGTCAGAACTCCATGGATATGTTTCTTTGGATGGAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258168.7
CDS-3UTR GCA 90 bp GATACTGACAAGCTCTCTTGCCATGCCCTTGTCAAAGCACCCACAGAAAGAATATCTTCCCCTGCTTCTTaGCCTCTGGTACTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: DTDKLSCHALVKAPTERISSPAS*PLVLWQ
Trigger: CTGCCACAGTACCAGAGGGCAAGAAGCAGGGGAAGA...TATTCTTTCTGTGGGTGCTTTGACAAGGGCATGGCAAGAGAGCTTGTCAGTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258168.7
CDS-3UTR GCA 90 bp TGGACTCCACTGAACTCCTGTAGCAAAGACATATCGGTATTGCTTTCCATTGTGCAGAACACCTCTGTGTaGTTCCAGGGGCTCTTCCCC +
Preference number: 4 (lower is better)
Translates to: WTPLNSCSKDISVLLSIVQNTSV*FQGLFP
Trigger: GGGGAAGAGCCCCTGGAAGCACACAGAGGTGTTCTG...CACAATGGAAAGCAATACCGATATGTCTTTGCTACAGGAGTTCAGTGGAGTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563804.5
CDS-3UTR GCA 90 bp TCCAAAGAAACATATCCATGGAGTTCTGACAGCCGAGCTCCCCTCCCCTACCCACCGGATGTATGCGGTTaGCATCTTGAGAATATCCAA +
Preference number: 4 (lower is better)
Translates to: SKETYPWSSDSRAPLPYPPDVCG*HLENIQ
Trigger: TTGGATATTCTCAAGATGGCAACCGCATACATCCGG...TGGGTAGGGGAGGGGAGCTCGGCTGTCAGAACTCCATGGATATGTTTCTTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258168.7
ENST00000563804.5
CDS-3UTR CCA 90 bp GAGGCCCAGCTCATTCTCCGGATGTATGCGGTTGCCATCTTGAGAATATCCAACACCAATGGTTGTATCTaGACTCCCCAACTGTGTGCA +
Preference number: 4 (lower is better)
Translates to: EAQLILRMYAVAILRISNTNGCI*TPQLCA
Trigger: TGCACACAGTTGGGGAGTCCAGATACAACCATTGGT...GTTGGATATTCTCAAGATGGCAACCGCATACATCCGGAGAATGAGCTGGGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563804.5
CDS-3UTR CCA 90 bp GTCAAAGCACCCACAGAAAGAATAAGTGCAAAAGGTAACAAAGGCCCTCCCCTCAGGCCGTCGAACCAATaGTTGTATCTGGACTCCCCA +
Preference number: 4 (lower is better)
Translates to: VKAPTERISAKGNKGPPLRPSNQ*LYLDSP
Trigger: TGGGGAGTCCAGATACAACCATTGGTTCGACGGCCT...GAGGGGAGGGCCTTTGTTACCTTTTGCACTTATTCTTTCTGTGGGTGCTTTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258168.7
ENST00000563804.5
CDS-3UTR CCA 90 bp GGCCCTCCCCTCCATCCAAAGAAACATATCCATGGAGTTCTGACAGCCGAGCTCTCCCCTTTTCCACAATaGATGTGCCCATGTTTAGAA +
Preference number: 4 (lower is better)
Translates to: GPPLHPKKHIHGVLTAELSPFPQ*MCPCLE
Trigger: TTCTAAACATGGGCACATCCATTGTGGAAAAGGGGA...GAGCTCGGCTGTCAGAACTCCATGGATATGTTTCTTTGGATGGAGGGGAGGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258168.7
ENST00000563804.5
CDS-3UTR CCA 90 bp CATCAGGCCTGGCTAGAAAGTGAGAACTCCCAGATACACAATTTAGTCCACCAGCTGCTTCTTGCCCTCTaGTACTGTGGCAGGGATCTT +
Preference number: 4 (lower is better)
Translates to: HQAWLESENSQIHNLVHQLLLAL*YCGRDL
Trigger: AAGATCCCTGCCACAGTACCAGAGGGCAAGAAGCAG...CTGGTGGACTAAATTGTGTATCTGGGAGTTCTCACTTTCTAGCCAGGCCTGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258168.7
CDS-3UTR CCA 90 bp TTTATATTACGCCATGACTTGCATGGAATGACCACAAAGTGGCATAACCTTCCTCTCATCCTTGGCACCTaGCGCGGGCACAAACAGGGG +
Preference number: 4 (lower is better)
Translates to: FILRHDLHGMTTKWHNLPLILGT*RGHKQG
Trigger: CCCCTGTTTGTGCCCGCGCCAGGTGCCAAGGATGAG...AGGAAGGTTATGCCACTTTGTGGTCATTCCATGCAAGTCATGGCGTAATATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258168.7
CDS-3UTR TCA 90 bp TCCCAGATACACAATTTAGTCCACCAGAAACATGGGAGGGAGCAAAGGAAAGAGCATCTCTGTCTCTCCTaGTGCCGTTTCTGCCTTTGC +
Preference number: 4 (lower is better)
Translates to: SQIHNLVHQKHGREQRKEHLCLS*CRFCLC
Trigger: GCAAAGGCAGAAACGGCATCAGGAGAGACAGAGATG...CTCTTTCCTTTGCTCCCTCCCATGTTTCTGGTGGACTAAATTGTGTATCTGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258168.7
CDS-3UTR TCA 90 bp GTCAAAGCACCCACAGAAAGAATAAGTGCAAAAGGTAACAAAGGCCCTCCCCTCGGCCTGGCTAGAAAGTaGGAACTCCCAGATACACAA +
Preference number: 4 (lower is better)
Translates to: VKAPTERISAKGNKGPPLGLARK*ELPDTQ
Trigger: TTGTGTATCTGGGAGTTCTCACTTTCTAGCCAGGCC...GAGGGGAGGGCCTTTGTTACCTTTTGCACTTATTCTTTCTGTGGGTGCTTTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258168.7
CDS-3UTR GCA 90 bp AACTTAACTCATCAGGCCTGGCTAGAAAGTGAGAACTCCCAGATACACAATTTAGCTGCTCCCTCCTCCTaGGTTTCCTTCCTGCTCTCC +
Preference number: 4 (lower is better)
Translates to: NLTHQAWLESENSQIHNLAAPSS*VSFLLS
Trigger: GGAGAGCAGGAAGGAAACGCAGGAGGAGGGAGCAGC...TAAATTGTGTATCTGGGAGTTCTCACTTTCTAGCCAGGCCTGATGAGTTAAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258168.7
CDS-3UTR GCA 90 bp TCCAAAGAAACATATCCATGGAGTTCTGACAGCCGAGCTCCCCTCCCCTACCCAAAATATTATATCCATTaGTCAGGGTGCCGAGGGAGA +
Preference number: 4 (lower is better)
Translates to: SKETYPWSSDSRAPLPYPKYYIH*SGCRGR
Trigger: TCTCCCTCGGCACCCTGAGCAATGGATATAATATTT...TGGGTAGGGGAGGGGAGCTCGGCTGTCAGAACTCCATGGATATGTTTCTTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258168.7
ENST00000563804.5
CDS-3UTR GCA 90 bp CTAGCATCTAGCAGTAAGTGTGGCGCTAGGGCACGGGATCCAACGGTGTTAGAGCACCACAATCCTGTTTaGCTCAATATTGGTGTTGTA +
Preference number: 4 (lower is better)
Translates to: LASSSKCGARARDPTVLEHHNPV*LNIGVV
Trigger: TACAACACCAATATTGAGGCAAACAGGATTGTGGTG...CTCTAACACCGTTGGATCCCGTGCCCTAGCGCCACACTTACTGCTAGATGCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564552.1
CDS-3UTR CCA 90 bp TTTATATTACGCCATGACTTGCATGGAATGACCACAAAGTGGCATAACCTTCCTGCTGTGGTAGTAGCTTaGGGAGAGCAGGGAGCGGGA +
Preference number: 4 (lower is better)
Translates to: FILRHDLHGMTTKWHNLPAVVVA*GEQGAG
Trigger: TCCCGCTCCCTGCTCTCCCCAAGCTACTACCACAGC...AGGAAGGTTATGCCACTTTGTGGTCATTCCATGCAAGTCATGGCGTAATATAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258168.7
3UTR CAA 72 bp TGTGTAAAACTTGGTCTGCACAGGCTGCCTGGTCCTTaGGTCGATGATGTGGATATAAGTCTTCTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: CVKLGLHRLPGP*VDDVDISLLLP
Trigger: AGGGAGGAGAAGACTTATATCCACATCATCGACCAAAGGACCAGGCAGCCTGTGCAGACCAAGTTTTACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563804.5
CDS-3UTR TCA 90 bp TATTATCTTGGTTGGGATTGGACTCCACTGAACTCCTGTAGCAAAGACATATCGCCTCTTCGTAGGCGTTaGCGTGATGGAAGACCACCA +
Preference number: 4 (lower is better)
Translates to: YYLGWDWTPLNSCSKDISPLRRR*RDGRPP
Trigger: TGGTGGTCTTCCATCACGTCAACGCCTACGAAGAGG...CGATATGTCTTTGCTACAGGAGTTCAGTGGAGTCCAATCCCAACCAAGATAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563804.5
CDS-3UTR TCA 90 bp TTTATATTACGCCATGACTTGCATGGAATGACCACAAAGTGGCATAACCTTCCTATATCCATGGAGTTCTaGCAGCCGAGCTCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: FILRHDLHGMTTKWHNLPISMEF*QPSSPP
Trigger: GGGAGGGGAGCTCGGCTGTCAGAACTCCATGGATAT...AGGAAGGTTATGCCACTTTGTGGTCATTCCATGCAAGTCATGGCGTAATATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258168.7
CDS-3UTR GCA 90 bp GTAATGAATAATCCATGGAGATCCATGTGCATATCGACATCAACAGAGGCACGGGCCATGCTGGAATCTTaGCTGTCACTTTGGCCCTCA +
Preference number: 4 (lower is better)
Translates to: VMNNPWRSMCISTSTEARAMLES*LSLWPS
Trigger: TGAGGGCCAAAGTGACAGGCAAGATTCCAGCATGGC...CCGTGCCTCTGTTGATGTCGATATGCACATGGATCTCCATGGATTATTCATTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563804.5
CDS-3UTR GCA 90 bp GTCAAAGCACCCACAGAAAGAATAAGTGCAAAAGGTAACAAAGGCCCTCCCCTCACTGACAAGCTCTCTTaGCATGCCCTTGTCAAAGCA +
Preference number: 4 (lower is better)
Translates to: VKAPTERISAKGNKGPPLTDKLS*HALVKA
Trigger: TGCTTTGACAAGGGCATGGCAAGAGAGCTTGTCAGT...GAGGGGAGGGCCTTTGTTACCTTTTGCACTTATTCTTTCTGTGGGTGCTTTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258168.7
CDS-3UTR CCA 90 bp GAGGCCCAGCTCATTCTCCGGATGTATGCGGTTGCCATCTTGAGAATATCCAACTCCCCTTTTCCACAATaGATGTGCCCATGTTTAGAA +
Preference number: 4 (lower is better)
Translates to: EAQLILRMYAVAILRISNSPFPQ*MCPCLE
Trigger: TTCTAAACATGGGCACATCCATTGTGGAAAAGGGGA...GTTGGATATTCTCAAGATGGCAACCGCATACATCCGGAGAATGAGCTGGGCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563804.5
CDS-3UTR TCA 90 bp TGGGGATCAGTAGAGACAATGGCTGATAAGATTACTCCGTCATCCTCATCCTTGCATTGTGAGCATAATTaGCCCGTGGAAGCTCTAAGC +
Preference number: 4 (lower is better)
Translates to: WGSVETMADKITPSSSSLHCEHN*PVEALS
Trigger: GCTTAGAGCTTCCACGGGTCAATTATGCTCACAATG...CAAGGATGAGGATGACGGAGTAATCTTATCAGCCATTGTCTCTACTGATCCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563804.5
CDS-3UTR GCA 90 bp GATACTGACAAGCTCTCTTGCCATGCCCTTGTCAAAGCACCCACAGAAAGAATAATCCATTGCTCAGGGTaGCGAGGGAGATCGATTTTA +
Preference number: 4 (lower is better)
Translates to: DTDKLSCHALVKAPTERIIHCSG*RGRSIL
Trigger: TAAAATCGATCTCCCTCGGCACCCTGAGCAATGGAT...TATTCTTTCTGTGGGTGCTTTGACAAGGGCATGGCAAGAGAGCTTGTCAGTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258168.7
CDS-3UTR GCA 90 bp ATGAATAATCCATGGAGATCCATGTGCATATCGACATCAACAGAGGCACGGGCCCCGGATGTATGCGGTTaGCATCTTGAGAATATCCAA +
Preference number: 4 (lower is better)
Translates to: MNNPWRSMCISTSTEARAPDVCG*HLENIQ
Trigger: TTGGATATTCTCAAGATGGCAACCGCATACATCCGG...GGCCCGTGCCTCTGTTGATGTCGATATGCACATGGATCTCCATGGATTATTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563804.5
CDS-3UTR GCA 90 bp TTTATATTACGCCATGACTTGCATGGAATGACCACAAAGTGGCATAACCTTCCTTTGGTCTGCACAGGCTaGCTGGTCCTTTGGTCGATG +
Preference number: 4 (lower is better)
Translates to: FILRHDLHGMTTKWHNLPLVCTG*LVLWSM
Trigger: CATCGACCAAAGGACCAGGCAGCCTGTGCAGACCAA...AGGAAGGTTATGCCACTTTGTGGTCATTCCATGCAAGTCATGGCGTAATATAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258168.7
CDS-3UTR GCA 90 bp CAAGCTCTCTTGCCATGCCCTTGTCAAAGCACCCACAGAAAGAATAAGTGCAAAATTTGTGCCCACTTCTaGATTCTTGTCCACGTGGAG +
Preference number: 4 (lower is better)
Translates to: QALLPCPCQSTHRKNKCKICAHF*ILVHVE
Trigger: CTCCACGTGGACAAGAATGCAGAAGTGGGCACAAAT...TTTGCACTTATTCTTTCTGTGGGTGCTTTGACAAGGGCATGGCAAGAGAGCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258168.7
CDS-3UTR CCA 90 bp TCCAAAGAAACATATCCATGGAGTTCTGACAGCCGAGCTCCCCTCCCCTACCCAGTAATGAATAATCCATaGAGATCCATGTGCATATCG +
Preference number: 4 (lower is better)
Translates to: SKETYPWSSDSRAPLPYPVMNNP*RSMCIS
Trigger: CGATATGCACATGGATCTCCATGGATTATTCATTAC...TGGGTAGGGGAGGGGAGCTCGGCTGTCAGAACTCCATGGATATGTTTCTTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258168.7
ENST00000563804.5
CDS-3UTR TCA 90 bp TTTATATTACGCCATGACTTGCATGGAATGACCACAAAGTGGCATAACCTTCCTTGTCCTCGTAGGCAATaGCGTCAAACACGATGCAGC +
Preference number: 4 (lower is better)
Translates to: FILRHDLHGMTTKWHNLPCPRRQ*RQTRCS
Trigger: GCTGCATCGTGTTTGACGTCATTGCCTACGAGGACA...AGGAAGGTTATGCCACTTTGTGGTCATTCCATGCAAGTCATGGCGTAATATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258168.7
CDS-3UTR TCA 90 bp CTCTCTTGCCATGCCCTTGTCAAAGCACCCACAGAAAGAATAAGTGCAAAAGGTATGACTTGCATGGAATaGCCACAAAGTGGCATAACC +
Preference number: 4 (lower is better)
Translates to: LSCHALVKAPTERISAKGMTCME*PQSGIT
Trigger: GGTTATGCCACTTTGTGGTCATTCCATGCAAGTCAT...ACCTTTTGCACTTATTCTTTCTGTGGGTGCTTTGACAAGGGCATGGCAAGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258168.7
CDS-3UTR GCA 90 bp CTCTCTTGCCATGCCCTTGTCAAAGCACCCACAGAAAGAATAAGTGCAAAAGGTCATTCTCCGGATGTATaGGGTTGCCATCTTGAGAAT +
Preference number: 4 (lower is better)
Translates to: LSCHALVKAPTERISAKGHSPDV*GCHLEN
Trigger: ATTCTCAAGATGGCAACCGCATACATCCGGAGAATG...ACCTTTTGCACTTATTCTTTCTGTGGGTGCTTTGACAAGGGCATGGCAAGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258168.7
CDS-3UTR GCA 90 bp TCCCAGATACACAATTTAGTCCACCAGAAACATGGGAGGGAGCAAAGGAAAGAGCCATGGAGATCCATGTaGATATCGACATCAACAGAG +
Preference number: 4 (lower is better)
Translates to: SQIHNLVHQKHGREQRKEPWRSM*ISTSTE
Trigger: CTCTGTTGATGTCGATATGCACATGGATCTCCATGG...CTCTTTCCTTTGCTCCCTCCCATGTTTCTGGTGGACTAAATTGTGTATCTGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258168.7
CDS-3UTR CCA 90 bp TGGACTCCACTGAACTCCTGTAGCAAAGACATATCGGTATTGCTTTCCATTGTGGATGGAAGACCACCATaGCGTCTGTGTAAAACTTGG +
Preference number: 4 (lower is better)
Translates to: WTPLNSCSKDISVLLSIVDGRPP*RLCKTW
Trigger: CCAAGTTTTACACAGACGCCATGGTGGTCTTCCATC...CACAATGGAAAGCAATACCGATATGTCTTTGCTACAGGAGTTCAGTGGAGTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563804.5
CDS-3UTR CCA 90 bp GATACTGACAAGCTCTCTTGCCATGCCCTTGTCAAAGCACCCACAGAAAGAATAGGAATGACCACAAAGTaGCATAACCTTCCTGGTCAT +
Preference number: 4 (lower is better)
Translates to: DTDKLSCHALVKAPTERIGMTTK*HNLPGH
Trigger: ATGACCAGGAAGGTTATGCCACTTTGTGGTCATTCC...TATTCTTTCTGTGGGTGCTTTGACAAGGGCATGGCAAGAGAGCTTGTCAGTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258168.7
CDS-3UTR TCA 90 bp GTCAAAGCACCCACAGAAAGAATAAGTGCAAAAGGTAACAAAGGCCCTCCCCTCTTTTATATTACGCCATaGCTTGCATGGAATGACCAC +
Preference number: 4 (lower is better)
Translates to: VKAPTERISAKGNKGPPLFYITP*LAWNDH
Trigger: GTGGTCATTCCATGCAAGTCATGGCGTAATATAAAA...GAGGGGAGGGCCTTTGTTACCTTTTGCACTTATTCTTTCTGTGGGTGCTTTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000258168.7
CDS-3UTR GCA 90 bp CATCAGGCCTGGCTAGAAAGTGAGAACTCCCAGATACACAATTTAGTCCACCAGCACCACAATCCTGTTTaGCTCAATATTGGTGTTGTA +
Preference number: 4 (lower is better)
Translates to: HQAWLESENSQIHNLVHQHHNPV*LNIGVV
Trigger: TACAACACCAATATTGAGGCAAACAGGATTGTGGTG...CTGGTGGACTAAATTGTGTATCTGGGAGTTCTCACTTTCTAGCCAGGCCTGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258168.7
CDS-3UTR CCA 90 bp TCTGTAATGAATAATCCATGGAGATCCATGTGCATATCGACATCAACAGAGGCATCCCTGCAGCCATGCTaGAATCTTGCCTGTCACTTT +
Preference number: 4 (lower is better)
Translates to: SVMNNPWRSMCISTSTEASLQPC*NLACHF
Trigger: AAAGTGACAGGCAAGATTCCAGCATGGCTGCAGGGA...TGCCTCTGTTGATGTCGATATGCACATGGATCTCCATGGATTATTCATTACAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563804.5
CDS-3UTR CCA 90 bp TCCCAGATACACAATTTAGTCCACCAGAAACATGGGAGGGAGCAAAGGAAAGAGAAAGAAACATATCCATaGAGTTCTGACAGCCGAGCT +
Preference number: 4 (lower is better)
Translates to: SQIHNLVHQKHGREQRKEKETYP*SSDSRA
Trigger: AGCTCGGCTGTCAGAACTCCATGGATATGTTTCTTT...CTCTTTCCTTTGCTCCCTCCCATGTTTCTGGTGGACTAAATTGTGTATCTGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258168.7
CDS-3UTR CCA 90 bp TGGGGATCAGTAGAGACAATGGCTGATAAGATTACTCCGTCATCCTCATCCTTGAAAGAAACATATCCATaGAGTTCTGACAGCCGAGCT +
Preference number: 4 (lower is better)
Translates to: WGSVETMADKITPSSSSLKETYP*SSDSRA
Trigger: AGCTCGGCTGTCAGAACTCCATGGATATGTTTCTTT...CAAGGATGAGGATGACGGAGTAATCTTATCAGCCATTGTCTCTACTGATCCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563804.5
CDS-3UTR TCA 90 bp TCTGTAATGAATAATCCATGGAGATCCATGTGCATATCGACATCAACAGAGGCAGATGTAATTGGTCTCTaGGGTCGCGTAGAAGTCTTC +
Preference number: 4 (lower is better)
Translates to: SVMNNPWRSMCISTSTEADVIGL*GRVEVF
Trigger: GAAGACTTCTACGCGACCTCAGAGACCAATTACATC...TGCCTCTGTTGATGTCGATATGCACATGGATCTCCATGGATTATTCATTACAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563804.5
CDS-3UTR TCA 90 bp TTTATATTACGCCATGACTTGCATGGAATGACCACAAAGTGGCATAACCTTCCTCATTGTGAGCATAATTaGCCCGTGGAAGCTCTAAGC +
Preference number: 4 (lower is better)
Translates to: FILRHDLHGMTTKWHNLPHCEHN*PVEALS
Trigger: GCTTAGAGCTTCCACGGGTCAATTATGCTCACAATG...AGGAAGGTTATGCCACTTTGTGGTCATTCCATGCAAGTCATGGCGTAATATAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258168.7
CDS-3UTR CCA 90 bp AACTTAACTCATCAGGCCTGGCTAGAAAGTGAGAACTCCCAGATACACAATTTAACCAATGGTTGTATCTaGACTCCCCAACTGTGTGCA +
Preference number: 4 (lower is better)
Translates to: NLTHQAWLESENSQIHNLTNGCI*TPQLCA
Trigger: TGCACACAGTTGGGGAGTCCAGATACAACCATTGGT...TAAATTGTGTATCTGGGAGTTCTCACTTTCTAGCCAGGCCTGATGAGTTAAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258168.7
3UTR CAA 72 bp GAACATTTCCAGCCTCATCATAATGGGGATGTGACGTaGCCAGATTTACCGCCACGTATTTACGATAATCAA +
Preference number: 4 (lower is better)
Translates to: EHFQPHHNGDVT*PDLPPRIYDNQ
Trigger: TTGATTATCGTAAATACGTGGCGGTAAATCTGGCAACGTCACATCCCCATTATGATGAGGCTGGAAATGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563804.5
CDS-3UTR GCA 90 bp TCTGTAATGAATAATCCATGGAGATCCATGTGCATATCGACATCAACAGAGGCACATTCTCCGGATGTATaGGGTTGCCATCTTGAGAAT +
Preference number: 4 (lower is better)
Translates to: SVMNNPWRSMCISTSTEAHSPDV*GCHLEN
Trigger: ATTCTCAAGATGGCAACCGCATACATCCGGAGAATG...TGCCTCTGTTGATGTCGATATGCACATGGATCTCCATGGATTATTCATTACAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563804.5
CDS-3UTR CCA 90 bp TCTGTAATGAATAATCCATGGAGATCCATGTGCATATCGACATCAACAGAGGCATATCTTGGTTGGGATTaGACTCCACTGAACTCCTGT +
Preference number: 4 (lower is better)
Translates to: SVMNNPWRSMCISTSTEAYLGWD*TPLNSC
Trigger: ACAGGAGTTCAGTGGAGTCCAATCCCAACCAAGATA...TGCCTCTGTTGATGTCGATATGCACATGGATCTCCATGGATTATTCATTACAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563804.5
CDS-3UTR CCA 90 bp CATCAGGCCTGGCTAGAAAGTGAGAACTCCCAGATACACAATTTAGTCCACCAGCATATTTTATTATCTTaGTTGGGATTGGACTCCACT +
Preference number: 4 (lower is better)
Translates to: HQAWLESENSQIHNLVHQHILLS*LGLDST
Trigger: AGTGGAGTCCAATCCCAACCAAGATAATAAAATATG...CTGGTGGACTAAATTGTGTATCTGGGAGTTCTCACTTTCTAGCCAGGCCTGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258168.7
CDS-3UTR CCA 90 bp GTCAAAGCACCCACAGAAAGAATAAGTGCAAAAGGTAACAAAGGCCCTCCCCTCCATATTTTATTATCTTaGTTGGGATTGGACTCCACT +
Preference number: 4 (lower is better)
Translates to: VKAPTERISAKGNKGPPLHILLS*LGLDST
Trigger: AGTGGAGTCCAATCCCAACCAAGATAATAAAATATG...GAGGGGAGGGCCTTTGTTACCTTTTGCACTTATTCTTTCTGTGGGTGCTTTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258168.7
ENST00000563804.5
CDS-3UTR GCA 90 bp AACTTAACTCATCAGGCCTGGCTAGAAAGTGAGAACTCCCAGATACACAATTTAAAATATTATATCCATTaGTCAGGGTGCCGAGGGAGA +
Preference number: 4 (lower is better)
Translates to: NLTHQAWLESENSQIHNLKYYIH*SGCRGR
Trigger: TCTCCCTCGGCACCCTGAGCAATGGATATAATATTT...TAAATTGTGTATCTGGGAGTTCTCACTTTCTAGCCAGGCCTGATGAGTTAAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258168.7
CDS-3UTR CCA 90 bp TGGACTCCACTGAACTCCTGTAGCAAAGACATATCGGTATTGCTTTCCATTGTGTTTTATTATCTTGGTTaGGATTGGACTCCACTGAAC +
Preference number: 4 (lower is better)
Translates to: WTPLNSCSKDISVLLSIVFYYLG*DWTPLN
Trigger: GTTCAGTGGAGTCCAATCCCAACCAAGATAATAAAA...CACAATGGAAAGCAATACCGATATGTCTTTGCTACAGGAGTTCAGTGGAGTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563804.5
CDS-3UTR CCA 90 bp AACTTAACTCATCAGGCCTGGCTAGAAAGTGAGAACTCCCAGATACACAATTTATGTTTGCCTCAATATTaGTGTTGTAGGTATCGCTTC +
Preference number: 4 (lower is better)
Translates to: NLTHQAWLESENSQIHNLCLPQY*CCRYRF
Trigger: GAAGCGATACCTACAACACCAATATTGAGGCAAACA...TAAATTGTGTATCTGGGAGTTCTCACTTTCTAGCCAGGCCTGATGAGTTAAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258168.7
CDS-3UTR CCA 90 bp TATTATCTTGGTTGGGATTGGACTCCACTGAACTCCTGTAGCAAAGACATATCGGTAATGAATAATCCATaGAGATCCATGTGCATATCG +
Preference number: 4 (lower is better)
Translates to: YYLGWDWTPLNSCSKDISVMNNP*RSMCIS
Trigger: CGATATGCACATGGATCTCCATGGATTATTCATTAC...CGATATGTCTTTGCTACAGGAGTTCAGTGGAGTCCAATCCCAACCAAGATAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563804.5
CDS-3UTR CCA 90 bp TTTATATTACGCCATGACTTGCATGGAATGACCACAAAGTGGCATAACCTTCCTTTTTATTATCTTGGTTaGGATTGGACTCCACTGAAC +
Preference number: 4 (lower is better)
Translates to: FILRHDLHGMTTKWHNLPFYYLG*DWTPLN
Trigger: GTTCAGTGGAGTCCAATCCCAACCAAGATAATAAAA...AGGAAGGTTATGCCACTTTGTGGTCATTCCATGCAAGTCATGGCGTAATATAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000258168.7
CDS-3UTR CAA 90 bp AGTAAGTGTGGCGCTAGGGCACGGGATCCAACGGTGTTAGAGGAGGGGCTCCCCTGCATCCCAGGCCCATaGCGGAGCAGGGTTCCCTGC +
Preference number: 5 (lower is better)
Translates to: SKCGARARDPTVLEEGLPCIPGP*RSRVPC
Trigger: GCAGGGAACCCTGCTCCGCAATGGGCCTGGGATGCA...GGGGAGCCCCTCCTCTAACACCGTTGGATCCCGTGCCCTAGCGCCACACTTACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564552.1
CDS GCA 90 bp TCCCCAACTGTGTGCATCCCAGGCCCATTGCGGAGCAGGGTTCCCTaGAGCCATGCTGGAATCTTGCCTGTCACTTTGGCCCTCACAGGC +
Preference number: 5 (lower is better)
Translates to: SPTVCIPGPLRSRVP*SHAGILPVTLALTG
Trigger: GCCTGTGAGGGCCAAAGTGACAGGCAAGATTCCAGCATGGCTGCAGGGAACCCTGCTCCGCAATGGGCCTGGGATGCACACAGTTGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258168.7
ENST00000563804.5
ENST00000564552.1
CDS-3UTR CAA 90 bp TGCAGGCTGAGCAACCTCACCCCGGCCGTCGCCGACTCTCCCTTTCTTGAGTCATTGGCTGGCTCTCACTaGTCCCTCTCCAAGAGCCCT +
Preference number: 5 (lower is better)
Translates to: CRLSNLTPAVADSPFLESLAGSH*SLSKSP
Trigger: AGGGCTCTTGGAGAGGGACAAGTGAGAGCCAGCCAA...TGACTCAAGAAAGGGAGAGTCGGCGACGGCCGGGGTGAGGTTGCTCAGCCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564552.1
CDS-3UTR CAA 90 bp AGCAGTAAGTGTGGCGCTAGGGCACGGGATCCAACGGTGTTAGAGGAGGGGCTCCCCCTGGTAAGCTGCTaGCAGGCTGAGCAACCTCAC +
Preference number: 5 (lower is better)
Translates to: SSKCGARARDPTVLEEGLPLVSC*QAEQPH
Trigger: GTGAGGTTGCTCAGCCTGCAAGCAGCTTACCAGGGG...GAGCCCCTCCTCTAACACCGTTGGATCCCGTGCCCTAGCGCCACACTTACTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564552.1
CDS GCA 90 bp GCAAGGCCGTCGAACCAATGGTTGTATCTGGACTCCCCAACTGTGTaGATCCCAGGCCCATTGCGGAGCAGGGTTCCCTGCAGCCATGCT +
Preference number: 5 (lower is better)
Translates to: ARPSNQWLYLDSPTV*IPGPLRSRVPCSHA
Trigger: AGCATGGCTGCAGGGAACCCTGCTCCGCAATGGGCCTGGGATGCACACAGTTGGGGAGTCCAGATACAACCATTGGTTCGACGGCCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258168.7
ENST00000563804.5
ENST00000564552.1
CDS-3UTR CAA 90 bp AGTAAGTGTGGCGCTAGGGCACGGGATCCAACGGTGTTAGAGGAGGGGCTCCCCAGCCATGCTGGAATCTaGCCTGTCACTTTGGCCCTC +
Preference number: 5 (lower is better)
Translates to: SKCGARARDPTVLEEGLPSHAGI*PVTLAL
Trigger: GAGGGCCAAAGTGACAGGCAAGATTCCAGCATGGCT...GGGGAGCCCCTCCTCTAACACCGTTGGATCCCGTGCCCTAGCGCCACACTTACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564552.1
CDS-3UTR CAA 90 bp AGCTGCTTGCAGGCTGAGCAACCTCACCCCGGCCGTCGCCGACTCTCCCTTTCTCCGTCGAACCAATGGTaGTATCTGGACTCCCCAACT +
Preference number: 5 (lower is better)
Translates to: SCLQAEQPHPGRRRLSLSPSNQW*YLDSPT
Trigger: AGTTGGGGAGTCCAGATACAACCATTGGTTCGACGG...AGAAAGGGAGAGTCGGCGACGGCCGGGGTGAGGTTGCTCAGCCTGCAAGCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564552.1
CDS-3UTR CAA 90 bp AGCTGCTTGCAGGCTGAGCAACCTCACCCCGGCCGTCGCCGACTCTCCCTTTCTGGTCCGGATAGGCCATaGTTCCAAACTCAGACACCA +
Preference number: 5 (lower is better)
Translates to: SCLQAEQPHPGRRRLSLSGPDRP*FQTQTP
Trigger: TGGTGTCTGAGTTTGGAACAATGGCCTATCCGGACC...AGAAAGGGAGAGTCGGCGACGGCCGGGGTGAGGTTGCTCAGCCTGCAAGCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564552.1
CDS-3UTR CAA 90 bp CCCCTCCATCCAAAGAAACATATCCATGGAGTTCTGACAGCCGAGCTCCCCTCCCCGTCATCCTCATCCTaGGCACCTGGCGCGGGCACA +
Preference number: 5 (lower is better)
Translates to: PLHPKKHIHGVLTAELPSPSSSS*APGAGT
Trigger: TGTGCCCGCGCCAGGTGCCAAGGATGAGGATGACGG...GGAGGGGAGCTCGGCTGTCAGAACTCCATGGATATGTTTCTTTGGATGGAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258168.7
ENST00000563804.5
CDS-3UTR CAA 90 bp GGCACGGGATCCAACGGTGTTAGAGGAGGGGCTCCCCTGGTAAGCTGCTTGCAGCCGCACTTCATGATGTaGATCAGGCAGTTGTCGGTG +
Preference number: 5 (lower is better)
Translates to: GTGSNGVRGGAPLVSCLQPHFMM*IRQLSV
Trigger: CACCGACAACTGCCTGATCAACATCATGAAGTGCGG...CTGCAAGCAGCTTACCAGGGGAGCCCCTCCTCTAACACCGTTGGATCCCGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564552.1
CDS-3UTR CAA 90 bp GGCACGGGATCCAACGGTGTTAGAGGAGGGGCTCCCCTGGTAAGCTGCTTGCAGCCGACTCTCCCTTTCTaGAGTCAGGAAGTGATGCTG +
Preference number: 5 (lower is better)
Translates to: GTGSNGVRGGAPLVSCLQPTLPF*SQEVML
Trigger: CAGCATCACTTCCTGACTCAAGAAAGGGAGAGTCGG...CTGCAAGCAGCTTACCAGGGGAGCCCCTCCTCTAACACCGTTGGATCCCGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564552.1
CDS-3UTR CAA 90 bp AGTAAGTGTGGCGCTAGGGCACGGGATCCAACGGTGTTAGAGGAGGGGCTCCCCATGTTGATCAGGCAGTaGTCGGTGAAATCGGGGATG +
Preference number: 5 (lower is better)
Translates to: SKCGARARDPTVLEEGLPMLIRQ*SVKSGM
Trigger: CATCCCCGATTTCACCGACAACTGCCTGATCAACAT...GGGGAGCCCCTCCTCTAACACCGTTGGATCCCGTGCCCTAGCGCCACACTTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000564552.1
CDS GCA 90 bp AACAGGTGCTCCTCTGTGTTCACAGGAGATGCTGCTCCCTCCTCCTaGGTTTCCTTCCTGCTCTCCTGCTCCTTCCCTCCTTCACATCTC +
Preference number: 5 (lower is better)
Translates to: NRCSSVFTGDAAPSS*VSFLLSCSFPPSHL
Trigger: GAGATGTGAAGGAGGGAAGGAGCAGGAGAGCAGGAAGGAAACGCAGGAGGAGGGAGCAGCATCTCCTGTGAACACAGAGGAGCACCTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258168.7
ENST00000563804.5
ENST00000564552.1
CDS GCA 90 bp AATGGTTGTATCTGGACTCCCCAACTGTGTGCATCCCAGGCCCATTaGGGAGCAGGGTTCCCTGCAGCCATGCTGGAATCTTGCCTGTCA +
Preference number: 5 (lower is better)
Translates to: NGCIWTPQLCASQAH*GAGFPAAMLESCLS
Trigger: TGACAGGCAAGATTCCAGCATGGCTGCAGGGAACCCTGCTCCGCAATGGGCCTGGGATGCACACAGTTGGGGAGTCCAGATACAACCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258168.7
ENST00000563804.5
ENST00000564552.1
CDS CCA 90 bp TCTCTGATGGTGAAGCTGTGGAGCAGGGCAAGGCCGTCGAACCAATaGTTGTATCTGGACTCCCCAACTGTGTGCATCCCAGGCCCATTG +
Preference number: 5 (lower is better)
Translates to: SLMVKLWSRARPSNQ*LYLDSPTVCIPGPL
Trigger: CAATGGGCCTGGGATGCACACAGTTGGGGAGTCCAGATACAACCATTGGTTCGACGGCCTTGCCCTGCTCCACAGCTTCACCATCAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258168.7
ENST00000563804.5
ENST00000564552.1
CDS-3UTR CAA 90 bp TCCAAAGAAACATATCCATGGAGTTCTGACAGCCGAGCTCCCCTCCCCTACCCACCCACTTCTGCATTCTaGTCCACGTGGAGGGGCACG +
Preference number: 5 (lower is better)
Translates to: SKETYPWSSDSRAPLPYPPTSAF*STWRGT
Trigger: CGTGCCCCTCCACGTGGACAAGAATGCAGAAGTGGG...TGGGTAGGGGAGGGGAGCTCGGCTGTCAGAACTCCATGGATATGTTTCTTTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258168.7
ENST00000563804.5
CDS-3UTR CAA 90 bp AGAGGCACGGGCCAATTCCGTAAAGCTTTTGGCATCCAGAATGAGCAGAAAAGGCCGTCATCCTCATCCTaGGCACCTGGCGCGGGCACA +
Preference number: 5 (lower is better)
Translates to: RGTGQFRKAFGIQNEQKRPSSSS*APGAGT
Trigger: TGTGCCCGCGCCAGGTGCCAAGGATGAGGATGACGG...CCTTTTCTGCTCATTCTGGATGCCAAAAGCTTTACGGAATTGGCCCGTGCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563804.5
CDS GCA 90 bp CTGTGTTCACAGGAGATGCTGCTCCCTCCTCCTGCGTTTCCTTCCTaGTCTCCTGCTCCTTCCCTCCTTCACATCTCTGTCTCTCCTGAT +
Preference number: 5 (lower is better)
Translates to: LCSQEMLLPPPAFPS*SPAPSLLHISVSPD
Trigger: ATCAGGAGAGACAGAGATGTGAAGGAGGGAAGGAGCAGGAGAGCAGGAAGGAAACGCAGGAGGAGGGAGCAGCATCTCCTGTGAACACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258168.7
ENST00000563804.5
ENST00000564552.1
CDS-3UTR CAA 90 bp GGCACGGGATCCAACGGTGTTAGAGGAGGGGCTCCCCTGGTAAGCTGCTTGCAGATGCCGTTTCTGCCTTaGCTTTTTCCTTTTTGGCTG +
Preference number: 5 (lower is better)
Translates to: GTGSNGVRGGAPLVSCLQMPFLP*LFPFWL
Trigger: CAGCCAAAAAGGAAAAAGCAAAGGCAGAAACGGCAT...CTGCAAGCAGCTTACCAGGGGAGCCCCTCCTCTAACACCGTTGGATCCCGTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000564552.1
CDS-3UTR CAA 90 bp AGCAGTAAGTGTGGCGCTAGGGCACGGGATCCAACGGTGTTAGAGGAGGGGCTCCAAATATTATATCCATaGCTCAGGGTGCCGAGGGAG +
Preference number: 5 (lower is better)
Translates to: SSKCGARARDPTVLEEGLQILYP*LRVPRE
Trigger: CTCCCTCGGCACCCTGAGCAATGGATATAATATTTG...GAGCCCCTCCTCTAACACCGTTGGATCCCGTGCCCTAGCGCCACACTTACTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564552.1
CDS-3UTR CAA 90 bp GCTTGCAGGCTGAGCAACCTCACCCCGGCCGTCGCCGACTCTCCCTTTCTTGAGACACCACAATCCTGTTaGCCTCAATATTGGTGTTGT +
Preference number: 5 (lower is better)
Translates to: ACRLSNLTPAVADSPFLETPQSC*PQYWCC
Trigger: ACAACACCAATATTGAGGCAAACAGGATTGTGGTGT...CTCAAGAAAGGGAGAGTCGGCGACGGCCGGGGTGAGGTTGCTCAGCCTGCAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564552.1
CDS-3UTR CAA 90 bp GCTTGCAGGCTGAGCAACCTCACCCCGGCCGTCGCCGACTCTCCCTTTCTTGAGCTGGTTACATATGTGTaGATACCTTCTCCAGGGTTT +
Preference number: 5 (lower is better)
Translates to: ACRLSNLTPAVADSPFLELVTYV*IPSPGF
Trigger: AAACCCTGGAGAAGGTATCAACACATATGTAACCAG...CTCAAGAAAGGGAGAGTCGGCGACGGCCGGGGTGAGGTTGCTCAGCCTGCAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564552.1
CDS GCA 90 bp CATTGCTCAGGGTGCCGAGGGAGATCGATTTTAACAGCAAACAGGTaGTCCTCTGTGTTCACAGGAGATGCTGCTCCCTCCTCCTGCGTT +
Preference number: 5 (lower is better)
Translates to: HCSGCRGRSILTANR*SSVFTGDAAPSSCV
Trigger: AACGCAGGAGGAGGGAGCAGCATCTCCTGTGAACACAGAGGAGCACCTGTTTGCTGTTAAAATCGATCTCCCTCGGCACCCTGAGCAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258168.7
ENST00000563804.5
ENST00000564552.1
CDS-3UTR CAA 90 bp CAGCTCATTCTCCGGATGTATGCGGTTGCCATCTTGAGAATATCCAACCTGAAATGCATCCCAGGCCCATaGCGGAGCAGGGTTCCCTGC +
Preference number: 5 (lower is better)
Translates to: QLILRMYAVAILRISNLKCIPGP*RSRVPC
Trigger: GCAGGGAACCCTGCTCCGCAATGGGCCTGGGATGCA...TTTCAGGTTGGATATTCTCAAGATGGCAACCGCATACATCCGGAGAATGAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563804.5
CDS-3UTR CAA 90 bp AGAGGCACGGGCCAATTCCGTAAAGCTTTTGGCATCCAGAATGAGCAGAAAAGGTTGGCTGGCTCTCACTaGTCCCTCTCCAAGAGCCCT +
Preference number: 5 (lower is better)
Translates to: RGTGQFRKAFGIQNEQKRLAGSH*SLSKSP
Trigger: AGGGCTCTTGGAGAGGGACAAGTGAGAGCCAGCCAA...CCTTTTCTGCTCATTCTGGATGCCAAAAGCTTTACGGAATTGGCCCGTGCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563804.5
CDS-3UTR CAA 90 bp CCCCTCCATCCAAAGAAACATATCCATGGAGTTCTGACAGCCGAGCTCCCCTCCAGGCTGCCTGGTCCTTaGGTCGATGATGTGGATATA +
Preference number: 5 (lower is better)
Translates to: PLHPKKHIHGVLTAELPSRLPGP*VDDVDI
Trigger: TATATCCACATCATCGACCAAAGGACCAGGCAGCCT...GGAGGGGAGCTCGGCTGTCAGAACTCCATGGATATGTTTCTTTGGATGGAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258168.7
ENST00000563804.5
CDS-3UTR CAA 90 bp TCCAAAGAAACATATCCATGGAGTTCTGACAGCCGAGCTCCCCTCCCCTACCCAAAGCGGCCTGCTTTTTaGTGTCCCAGTCCATGTCTG +
Preference number: 5 (lower is better)
Translates to: SKETYPWSSDSRAPLPYPKRPAF*CPSPCL
Trigger: CAGACATGGACTGGGACACAAAAAAGCAGGCCGCTT...TGGGTAGGGGAGGGGAGCTCGGCTGTCAGAACTCCATGGATATGTTTCTTTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258168.7
ENST00000563804.5
CDS-3UTR CAA 90 bp GAAACATATCCATGGAGTTCTGACAGCCGAGCTCCCCTCCCCTACCCAAACCCCATGCCGTTTCTGCCTTaGCTTTTTCCTTTTTGGCTG +
Preference number: 5 (lower is better)
Translates to: ETYPWSSDSRAPLPYPNPMPFLP*LFPFWL
Trigger: CAGCCAAAAAGGAAAAAGCAAAGGCAGAAACGGCAT...GGGGTTTGGGTAGGGGAGGGGAGCTCGGCTGTCAGAACTCCATGGATATGTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000258168.7
ENST00000563804.5
CDS-3UTR CAA 90 bp TCCAAAGAAACATATCCATGGAGTTCTGACAGCCGAGCTCCCCTCCCCTACCCAATGTTGATCAGGCAGTaGTCGGTGAAATCGGGGATG +
Preference number: 5 (lower is better)
Translates to: SKETYPWSSDSRAPLPYPMLIRQ*SVKSGM
Trigger: CATCCCCGATTTCACCGACAACTGCCTGATCAACAT...TGGGTAGGGGAGGGGAGCTCGGCTGTCAGAACTCCATGGATATGTTTCTTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258168.7
ENST00000563804.5
CDS-3UTR CAA 90 bp GAGGCCCAGCTCATTCTCCGGATGTATGCGGTTGCCATCTTGAGAATATCCAACCCGCACTTCATGATGTaGATCAGGCAGTTGTCGGTG +
Preference number: 5 (lower is better)
Translates to: EAQLILRMYAVAILRISNPHFMM*IRQLSV
Trigger: CACCGACAACTGCCTGATCAACATCATGAAGTGCGG...GTTGGATATTCTCAAGATGGCAACCGCATACATCCGGAGAATGAGCTGGGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563804.5
CDS-3UTR CAA 90 bp CAGCTCATTCTCCGGATGTATGCGGTTGCCATCTTGAGAATATCCAACCTGAAACCCACTTCTGCATTCTaGTCCACGTGGAGGGGCACG +
Preference number: 5 (lower is better)
Translates to: QLILRMYAVAILRISNLKPTSAF*STWRGT
Trigger: CGTGCCCCTCCACGTGGACAAGAATGCAGAAGTGGG...TTTCAGGTTGGATATTCTCAAGATGGCAACCGCATACATCCGGAGAATGAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563804.5
CDS-3UTR CAA 90 bp AGTCCTGGTTCAGGTTGGCCAGGTAGAAGAGCTGGTAGAGGCTGTTGTCCTCGTTTATCTTGGTTGGGATaGGACTCCACTGAACTCCTG +
Preference number: 5 (lower is better)
Translates to: SPGSGWPGRRAGRGCCPRLSWLG*DSTELL
Trigger: CAGGAGTTCAGTGGAGTCCAATCCCAACCAAGATAA...ACGAGGACAACAGCCTCTACCAGCTCTTCTACCTGGCCAACCTGAACCAGGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563804.5
CDS-3UTR CAA 90 bp TCCAAAGAAACATATCCATGGAGTTCTGACAGCCGAGCTCCCCTCCCCTACCCATCTCTTGCCATGCCCTaGTCAAAGCACCCACAGAAA +
Preference number: 5 (lower is better)
Translates to: SKETYPWSSDSRAPLPYPSLAMP*SKHPQK
Trigger: TTTCTGTGGGTGCTTTGACAAGGGCATGGCAAGAGA...TGGGTAGGGGAGGGGAGCTCGGCTGTCAGAACTCCATGGATATGTTTCTTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258168.7
CDS-3UTR CAA 90 bp TCCCAGATACACAATTTAGTCCACCAGAAACATGGGAGGGAGCAAAGGAAAGAGTTGGCTGGCTCTCACTaGTCCCTCTCCAAGAGCCCT +
Preference number: 5 (lower is better)
Translates to: SQIHNLVHQKHGREQRKELAGSH*SLSKSP
Trigger: AGGGCTCTTGGAGAGGGACAAGTGAGAGCCAGCCAA...CTCTTTCCTTTGCTCCCTCCCATGTTTCTGGTGGACTAAATTGTGTATCTGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258168.7
CDS-3UTR CAA 90 bp TTTATATTACGCCATGACTTGCATGGAATGACCACAAAGTGGCATAACCTTCCTTGCATCCCAGGCCCATaGCGGAGCAGGGTTCCCTGC +
Preference number: 5 (lower is better)
Translates to: FILRHDLHGMTTKWHNLPCIPGP*RSRVPC
Trigger: GCAGGGAACCCTGCTCCGCAATGGGCCTGGGATGCA...AGGAAGGTTATGCCACTTTGTGGTCATTCCATGCAAGTCATGGCGTAATATAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258168.7
CDS-3UTR CAA 90 bp GCCCACTTCTGCATTCTTGTCCACGTGGAGGGGCACGGCAAACCTCCTGAGGGTTCATATTTTATTATCTaGGTTGGGATTGGACTCCAC +
Preference number: 5 (lower is better)
Translates to: AHFCILVHVEGHGKPPEGSYFII*VGIGLH
Trigger: GTGGAGTCCAATCCCAACCAAGATAATAAAATATGA...ACCCTCAGGAGGTTTGCCGTGCCCCTCCACGTGGACAAGAATGCAGAAGTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563804.5
CDS GCA 90 bp CTGTCACTTTGGCCCTCACAGGCTCCAGCTGTTCTTTCCTATTCCTaGCAAATATTATATCCATTGCTCAGGGTGCCGAGGGAGATCGAT +
Preference number: 5 (lower is better)
Translates to: LSLWPSQAPAVLSYS*QILYPLLRVPREID
Trigger: ATCGATCTCCCTCGGCACCCTGAGCAATGGATATAATATTTGGCAGGAATAGGAAAGAACAGCTGGAGCCTGTGAGGGCCAAAGTGACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258168.7
ENST00000563804.5
ENST00000564552.1
CDS-3UTR CAA 90 bp TCCAAAGAAACATATCCATGGAGTTCTGACAGCCGAGCTCCCCTCCCCTACCCATTTGCTTTTTCCTTTTaGGCTGGCTCTCACTTGTCC +
Preference number: 5 (lower is better)
Translates to: SKETYPWSSDSRAPLPYPFAFSF*AGSHLS
Trigger: GGACAAGTGAGAGCCAGCCAAAAAGGAAAAAGCAAA...TGGGTAGGGGAGGGGAGCTCGGCTGTCAGAACTCCATGGATATGTTTCTTTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000258168.7
ENST00000563804.5
CDS-3UTR CAA 90 bp TCCAAAGAAACATATCCATGGAGTTCTGACAGCCGAGCTCCCCTCCCCTACCCAATGCCGTTTCTGCCTTaGCTTTTTCCTTTTTGGCTG +
Preference number: 5 (lower is better)
Translates to: SKETYPWSSDSRAPLPYPMPFLP*LFPFWL
Trigger: CAGCCAAAAAGGAAAAAGCAAAGGCAGAAACGGCAT...TGGGTAGGGGAGGGGAGCTCGGCTGTCAGAACTCCATGGATATGTTTCTTTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000258168.7
ENST00000563804.5
CDS-3UTR CAA 90 bp TGGGGATCAGTAGAGACAATGGCTGATAAGATTACTCCGTCATCCTCATCCTTGAGCCATGCTGGAATCTaGCCTGTCACTTTGGCCCTC +
Preference number: 5 (lower is better)
Translates to: WGSVETMADKITPSSSSLSHAGI*PVTLAL
Trigger: GAGGGCCAAAGTGACAGGCAAGATTCCAGCATGGCT...CAAGGATGAGGATGACGGAGTAATCTTATCAGCCATTGTCTCTACTGATCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563804.5
CDS-3UTR CAA 90 bp ATGAATAATCCATGGAGATCCATGTGCATATCGACATCAACAGAGGCACGGGCCAATGGGGATGTGACGTaGCCAGATTTACCGCCACGT +
Preference number: 5 (lower is better)
Translates to: MNNPWRSMCISTSTEARANGDVT*PDLPPR
Trigger: ACGTGGCGGTAAATCTGGCAACGTCACATCCCCATT...GGCCCGTGCCTCTGTTGATGTCGATATGCACATGGATCTCCATGGATTATTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563804.5
CDS-3UTR CAA 90 bp GTGGAAAGCCAGGCAGGAGGCCCAGCTCATTCTCCGGATGTATGCGGTTGCCATATTTTATTATCTTGGTaGGGATTGGACTCCACTGAA +
Preference number: 5 (lower is better)
Translates to: VESQAGGPAHSPDVCGCHILLSW*GLDSTE
Trigger: TTCAGTGGAGTCCAATCCCAACCAAGATAATAAAAT...ATGGCAACCGCATACATCCGGAGAATGAGCTGGGCCTCCTGCCTGGCTTTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563804.5
CDS-3UTR CAA 90 bp CAAGCTCTCTTGCCATGCCCTTGTCAAAGCACCCACAGAAAGAATAAGTGCAAACCGTCGAACCAATGGTaGTATCTGGACTCCCCAACT +
Preference number: 5 (lower is better)
Translates to: QALLPCPCQSTHRKNKCKPSNQW*YLDSPT
Trigger: AGTTGGGGAGTCCAGATACAACCATTGGTTCGACGG...TTTGCACTTATTCTTTCTGTGGGTGCTTTGACAAGGGCATGGCAAGAGAGCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258168.7
CDS-3UTR CAA 90 bp CAAGCTCTCTTGCCATGCCCTTGTCAAAGCACCCACAGAAAGAATAAGTGCAAAGGTCCGGATAGGCCATaGTTCCAAACTCAGACACCA +
Preference number: 5 (lower is better)
Translates to: QALLPCPCQSTHRKNKCKGPDRP*FQTQTP
Trigger: TGGTGTCTGAGTTTGGAACAATGGCCTATCCGGACC...TTTGCACTTATTCTTTCTGTGGGTGCTTTGACAAGGGCATGGCAAGAGAGCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258168.7
CDS-3UTR CAA 90 bp GTAATGAATAATCCATGGAGATCCATGTGCATATCGACATCAACAGAGGCACGGCCGTCGAACCAATGGTaGTATCTGGACTCCCCAACT +
Preference number: 5 (lower is better)
Translates to: VMNNPWRSMCISTSTEARPSNQW*YLDSPT
Trigger: AGTTGGGGAGTCCAGATACAACCATTGGTTCGACGG...CCGTGCCTCTGTTGATGTCGATATGCACATGGATCTCCATGGATTATTCATTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563804.5
CDS-3UTR CAA 90 bp TGGGGATCAGTAGAGACAATGGCTGATAAGATTACTCCGTCATCCTCATCCTTGATGTTGATCAGGCAGTaGTCGGTGAAATCGGGGATG +
Preference number: 5 (lower is better)
Translates to: WGSVETMADKITPSSSSLMLIRQ*SVKSGM
Trigger: CATCCCCGATTTCACCGACAACTGCCTGATCAACAT...CAAGGATGAGGATGACGGAGTAATCTTATCAGCCATTGTCTCTACTGATCCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563804.5
CDS-3UTR CAA 90 bp CTCTCTTGCCATGCCCTTGTCAAAGCACCCACAGAAAGAATAAGTGCAAAAGGTAGGCTGCCTGGTCCTTaGGTCGATGATGTGGATATA +
Preference number: 5 (lower is better)
Translates to: LSCHALVKAPTERISAKGRLPGP*VDDVDI
Trigger: TATATCCACATCATCGACCAAAGGACCAGGCAGCCT...ACCTTTTGCACTTATTCTTTCTGTGGGTGCTTTGACAAGGGCATGGCAAGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258168.7
CDS-3UTR CAA 90 bp GATGTGACGTTGCCAGATTTACCGCCACGTATTTACGATAATCAACCTTCTCCAAAGCGGCCTGCTTTTTaGTGTCCCAGTCCATGTCTG +
Preference number: 5 (lower is better)
Translates to: DVTLPDLPPRIYDNQPSPKRPAF*CPSPCL
Trigger: CAGACATGGACTGGGACACAAAAAAGCAGGCCGCTT...TGGAGAAGGTTGATTATCGTAAATACGTGGCGGTAAATCTGGCAACGTCACATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563804.5
CDS TCA 90 bp GGTTTCCAGAGTCTGTGGGTTGATTTTCCTGATGTAATTGGTCTCTaGGGTCGCGTAGAAGTCTTCTCCGCACTTCATGATGTTGATCAG +
Preference number: 5 (lower is better)
Translates to: GFQSLWVDFPDVIGL*GRVEVFSALHDVDQ
Trigger: CTGATCAACATCATGAAGTGCGGAGAAGACTTCTACGCGACCTCAGAGACCAATTACATCAGGAAAATCAACCCACAGACTCTGGAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258168.7
ENST00000563804.5
ENST00000564552.1
CDS GCA 90 bp AGGCTCCAGCTGTTCTTTCCTATTCCTGCCAAATATTATATCCATTaGTCAGGGTGCCGAGGGAGATCGATTTTAACAGCAAACAGGTGC +
Preference number: 5 (lower is better)
Translates to: RLQLFFPIPAKYYIH*SGCRGRSILTANRC
Trigger: GCACCTGTTTGCTGTTAAAATCGATCTCCCTCGGCACCCTGAGCAATGGATATAATATTTGGCAGGAATAGGAAAGAACAGCTGGAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258168.7
ENST00000563804.5
ENST00000564552.1
CDS-3UTR CAA 90 bp GTCAAAGCACCCACAGAAAGAATAAGTGCAAAAGGTAACAAAGGCCCTCCCCTCTTTGCTTTTTCCTTTTaGGCTGGCTCTCACTTGTCC +
Preference number: 5 (lower is better)
Translates to: VKAPTERISAKGNKGPPLFAFSF*AGSHLS
Trigger: GGACAAGTGAGAGCCAGCCAAAAAGGAAAAAGCAAA...GAGGGGAGGGCCTTTGTTACCTTTTGCACTTATTCTTTCTGTGGGTGCTTTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000258168.7
ENST00000563804.5
CDS-3UTR CAA 90 bp CAAGCTCTCTTGCCATGCCCTTGTCAAAGCACCCACAGAAAGAATAAGTGCAAACAAATATTATATCCATaGCTCAGGGTGCCGAGGGAG +
Preference number: 5 (lower is better)
Translates to: QALLPCPCQSTHRKNKCKQILYP*LRVPRE
Trigger: CTCCCTCGGCACCCTGAGCAATGGATATAATATTTG...TTTGCACTTATTCTTTCTGTGGGTGCTTTGACAAGGGCATGGCAAGAGAGCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258168.7
CDS-3UTR CAA 90 bp AACTTAACTCATCAGGCCTGGCTAGAAAGTGAGAACTCCCAGATACACAATTTAAGCCATGCTGGAATCTaGCCTGTCACTTTGGCCCTC +
Preference number: 5 (lower is better)
Translates to: NLTHQAWLESENSQIHNLSHAGI*PVTLAL
Trigger: GAGGGCCAAAGTGACAGGCAAGATTCCAGCATGGCT...TAAATTGTGTATCTGGGAGTTCTCACTTTCTAGCCAGGCCTGATGAGTTAAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258168.7
CDS-3UTR CAA 90 bp TCCAAAGAAACATATCCATGGAGTTCTGACAGCCGAGCTCCCCTCCCCTACCCAAAAGACATATCGGTATaGCTTTCCATTGTGAGCATA +
Preference number: 5 (lower is better)
Translates to: SKETYPWSSDSRAPLPYPKDISV*LSIVSI
Trigger: TATGCTCACAATGGAAAGCAATACCGATATGTCTTT...TGGGTAGGGGAGGGGAGCTCGGCTGTCAGAACTCCATGGATATGTTTCTTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258168.7
ENST00000563804.5
CDS-3UTR CAA 90 bp CTCTCTTGCCATGCCCTTGTCAAAGCACCCACAGAAAGAATAAGTGCAAAAGGTTTATCTTGGTTGGGATaGGACTCCACTGAACTCCTG +
Preference number: 5 (lower is better)
Translates to: LSCHALVKAPTERISAKGLSWLG*DSTELL
Trigger: CAGGAGTTCAGTGGAGTCCAATCCCAACCAAGATAA...ACCTTTTGCACTTATTCTTTCTGTGGGTGCTTTGACAAGGGCATGGCAAGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258168.7
CDS GCA 90 bp GTCCGGATAGGCCATTGTTCCAAACTCAGACACCACAATCCTGTTTaGCTCAATATTGGTGTTGTAGGTATCGCTTCTCAGGTATTTGCT +
Preference number: 5 (lower is better)
Translates to: VRIGHCSKLRHHNPV*LNIGVVGIASQVFA
Trigger: AGCAAATACCTGAGAAGCGATACCTACAACACCAATATTGAGGCAAACAGGATTGTGGTGTCTGAGTTTGGAACAATGGCCTATCCGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258168.7
ENST00000564552.1
CDS-3UTR CAA 90 bp TGGACTCCACTGAACTCCTGTAGCAAAGACATATCGGTATTGCTTTCCATTGTGCAAATATTATATCCATaGCTCAGGGTGCCGAGGGAG +
Preference number: 5 (lower is better)
Translates to: WTPLNSCSKDISVLLSIVQILYP*LRVPRE
Trigger: CTCCCTCGGCACCCTGAGCAATGGATATAATATTTG...CACAATGGAAAGCAATACCGATATGTCTTTGCTACAGGAGTTCAGTGGAGTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563804.5
CDS-3UTR CAA 90 bp CATCAGGCCTGGCTAGAAAGTGAGAACTCCCAGATACACAATTTAGTCCACCAGACACCACAATCCTGTTaGCCTCAATATTGGTGTTGT +
Preference number: 5 (lower is better)
Translates to: HQAWLESENSQIHNLVHQTPQSC*PQYWCC
Trigger: ACAACACCAATATTGAGGCAAACAGGATTGTGGTGT...CTGGTGGACTAAATTGTGTATCTGGGAGTTCTCACTTTCTAGCCAGGCCTGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258168.7
CDS-3UTR CAA 90 bp AACTTAACTCATCAGGCCTGGCTAGAAAGTGAGAACTCCCAGATACACAATTTACCGCACTTCATGATGTaGATCAGGCAGTTGTCGGTG +
Preference number: 5 (lower is better)
Translates to: NLTHQAWLESENSQIHNLPHFMM*IRQLSV
Trigger: CACCGACAACTGCCTGATCAACATCATGAAGTGCGG...TAAATTGTGTATCTGGGAGTTCTCACTTTCTAGCCAGGCCTGATGAGTTAAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258168.7
CDS-3UTR CAA 90 bp AACTTAACTCATCAGGCCTGGCTAGAAAGTGAGAACTCCCAGATACACAATTTAAATGGGGATGTGACGTaGCCAGATTTACCGCCACGT +
Preference number: 5 (lower is better)
Translates to: NLTHQAWLESENSQIHNLNGDVT*PDLPPR
Trigger: ACGTGGCGGTAAATCTGGCAACGTCACATCCCCATT...TAAATTGTGTATCTGGGAGTTCTCACTTTCTAGCCAGGCCTGATGAGTTAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258168.7
CDS-3UTR CAA 90 bp GTCAAAGCACCCACAGAAAGAATAAGTGCAAAAGGTAACAAAGGCCCTCCCCTCAATTCCGTAAAGCTTTaGGCATCCAGAATGAGCAGA +
Preference number: 5 (lower is better)
Translates to: VKAPTERISAKGNKGPPLNSVKL*ASRMSR
Trigger: TCTGCTCATTCTGGATGCCAAAAGCTTTACGGAATT...GAGGGGAGGGCCTTTGTTACCTTTTGCACTTATTCTTTCTGTGGGTGCTTTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258168.7
ENST00000563804.5
CDS-3UTR CAA 90 bp TCCCAGATACACAATTTAGTCCACCAGAAACATGGGAGGGAGCAAAGGAAAGAGTATGCGGTTGCCATCTaGAGAATATCCAACCTGAAA +
Preference number: 5 (lower is better)
Translates to: SQIHNLVHQKHGREQRKEYAVAI*RISNLK
Trigger: TTTCAGGTTGGATATTCTCAAGATGGCAACCGCATA...CTCTTTCCTTTGCTCCCTCCCATGTTTCTGGTGGACTAAATTGTGTATCTGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258168.7
CDS-3UTR CAA 90 bp GATACTGACAAGCTCTCTTGCCATGCCCTTGTCAAAGCACCCACAGAAAGAATAAATTCCGTAAAGCTTTaGGCATCCAGAATGAGCAGA +
Preference number: 5 (lower is better)
Translates to: DTDKLSCHALVKAPTERINSVKL*ASRMSR
Trigger: TCTGCTCATTCTGGATGCCAAAAGCTTTACGGAATT...TATTCTTTCTGTGGGTGCTTTGACAAGGGCATGGCAAGAGAGCTTGTCAGTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258168.7
CDS-3UTR CAA 90 bp GATACTGACAAGCTCTCTTGCCATGCCCTTGTCAAAGCACCCACAGAAAGAATAATATTACGCCATGACTaGCATGGAATGACCACAAAG +
Preference number: 5 (lower is better)
Translates to: DTDKLSCHALVKAPTERIILRHD*HGMTTK
Trigger: CTTTGTGGTCATTCCATGCAAGTCATGGCGTAATAT...TATTCTTTCTGTGGGTGCTTTGACAAGGGCATGGCAAGAGAGCTTGTCAGTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258168.7
CDS-3UTR CAA 90 bp GTCAAAGCACCCACAGAAAGAATAAGTGCAAAAGGTAACAAAGGCCCTCCCCTCATTTTATTATCTTGGTaGGGATTGGACTCCACTGAA +
Preference number: 5 (lower is better)
Translates to: VKAPTERISAKGNKGPPLILLSW*GLDSTE
Trigger: TTCAGTGGAGTCCAATCCCAACCAAGATAATAAAAT...GAGGGGAGGGCCTTTGTTACCTTTTGCACTTATTCTTTCTGTGGGTGCTTTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258168.7
ENST00000563804.5
CDS CCA 90 bp CCATTGTTCCAAACTCAGACACCACAATCCTGTTTGCCTCAATATTaGTGTTGTAGGTATCGCTTCTCAGGTATTTGCTCCTGTAATAGA +
Preference number: 5 (lower is better)
Translates to: PLFQTQTPQSCLPQY*CCRYRFSGICSCNR
Trigger: TCTATTACAGGAGCAAATACCTGAGAAGCGATACCTACAACACCAATATTGAGGCAAACAGGATTGTGGTGTCTGAGTTTGGAACAATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258168.7
ENST00000564552.1
CDS-3UTR CAA 90 bp CTCTCTTGCCATGCCCTTGTCAAAGCACCCACAGAAAGAATAAGTGCAAAAGGTAAAGACATATCGGTATaGCTTTCCATTGTGAGCATA +
Preference number: 5 (lower is better)
Translates to: LSCHALVKAPTERISAKGKDISV*LSIVSI
Trigger: TATGCTCACAATGGAAAGCAATACCGATATGTCTTT...ACCTTTTGCACTTATTCTTTCTGTGGGTGCTTTGACAAGGGCATGGCAAGAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258168.7
CDS-3UTR CAA 90 bp CAAGCTCTCTTGCCATGCCCTTGTCAAAGCACCCACAGAAAGAATAAGTGCAAAATGGTCAAGGTCTTTTaGTTAAAGGAAAGGAGGTTT +
Preference number: 5 (lower is better)
Translates to: QALLPCPCQSTHRKNKCKMVKVF*LKERRF
Trigger: AAACCTCCTTTCCTTTAACAAAAAGACCTTGACCAT...TTTGCACTTATTCTTTCTGTGGGTGCTTTGACAAGGGCATGGCAAGAGAGCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258168.7
CDS-3UTR CAA 90 bp TCTGTAATGAATAATCCATGGAGATCCATGTGCATATCGACATCAACAGAGGCATATGCGGTTGCCATCTaGAGAATATCCAACCTGAAA +
Preference number: 5 (lower is better)
Translates to: SVMNNPWRSMCISTSTEAYAVAI*RISNLK
Trigger: TTTCAGGTTGGATATTCTCAAGATGGCAACCGCATA...TGCCTCTGTTGATGTCGATATGCACATGGATCTCCATGGATTATTCATTACAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563804.5
CDS-3UTR CAA 90 bp TTTATATTACGCCATGACTTGCATGGAATGACCACAAAGTGGCATAACCTTCCTTCATATTTTATTATCTaGGTTGGGATTGGACTCCAC +
Preference number: 5 (lower is better)
Translates to: FILRHDLHGMTTKWHNLPSYFII*VGIGLH
Trigger: GTGGAGTCCAATCCCAACCAAGATAATAAAATATGA...AGGAAGGTTATGCCACTTTGTGGTCATTCCATGCAAGTCATGGCGTAATATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258168.7
CDS GCA 72 bp GTGTGCATCCCAGGCCCATTGCGGAGCAGGGTTCCCTaGAGCCATGCTGGAATCTTGCCTGTCACTTTGGCC +
Preference number: 6 (lower is better)
Translates to: VCIPGPLRSRVP*SHAGILPVTLA
Trigger: GGCCAAAGTGACAGGCAAGATTCCAGCATGGCTGCAGGGAACCCTGCTCCGCAATGGGCCTGGGATGCACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258168.7
ENST00000563804.5
ENST00000564552.1
CDS CAA 90 bp CTGATGGTGAAGCTGTGGAGCAGGGCAAGGCCGTCGAACCAATGGTaGTATCTGGACTCCCCAACTGTGTGCATCCCAGGCCCATTGCGG +
Preference number: 6 (lower is better)
Translates to: LMVKLWSRARPSNQW*YLDSPTVCIPGPLR
Trigger: CCGCAATGGGCCTGGGATGCACACAGTTGGGGAGTCCAGATACAACCATTGGTTCGACGGCCTTGCCCTGCTCCACAGCTTCACCATCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258168.7
ENST00000563804.5
ENST00000564552.1
CDS CAA 90 bp CAATGGTTGTATCTGGACTCCCCAACTGTGTGCATCCCAGGCCCATaGCGGAGCAGGGTTCCCTGCAGCCATGCTGGAATCTTGCCTGTC +
Preference number: 6 (lower is better)
Translates to: QWLYLDSPTVCIPGP*RSRVPCSHAGILPV
Trigger: GACAGGCAAGATTCCAGCATGGCTGCAGGGAACCCTGCTCCGCAATGGGCCTGGGATGCACACAGTTGGGGAGTCCAGATACAACCATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258168.7
ENST00000563804.5
ENST00000564552.1
CDS GCA 72 bp TCCTCTGTGTTCACAGGAGATGCTGCTCCCTCCTCCTaGGTTTCCTTCCTGCTCTCCTGCTCCTTCCCTCCT +
Preference number: 6 (lower is better)
Translates to: SSVFTGDAAPSS*VSFLLSCSFPP
Trigger: AGGAGGGAAGGAGCAGGAGAGCAGGAAGGAAACGCAGGAGGAGGGAGCAGCATCTCCTGTGAACACAGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258168.7
ENST00000563804.5
ENST00000564552.1
CDS CAA 72 bp AAGCTGTGGAGCAGGGCAAGGCCGTCGAACCAATGGTaGTATCTGGACTCCCCAACTGTGTGCATCCCAGGC +
Preference number: 6 (lower is better)
Translates to: KLWSRARPSNQW*YLDSPTVCIPG
Trigger: GCCTGGGATGCACACAGTTGGGGAGTCCAGATACAACCATTGGTTCGACGGCCTTGCCCTGCTCCACAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258168.7
ENST00000563804.5
ENST00000564552.1
CDS CCA 72 bp GTGAAGCTGTGGAGCAGGGCAAGGCCGTCGAACCAATaGTTGTATCTGGACTCCCCAACTGTGTGCATCCCA +
Preference number: 6 (lower is better)
Translates to: VKLWSRARPSNQ*LYLDSPTVCIP
Trigger: TGGGATGCACACAGTTGGGGAGTCCAGATACAACCATTGGTTCGACGGCCTTGCCCTGCTCCACAGCTTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258168.7
ENST00000563804.5
ENST00000564552.1
CDS GCA 72 bp GGGTGCCGAGGGAGATCGATTTTAACAGCAAACAGGTaGTCCTCTGTGTTCACAGGAGATGCTGCTCCCTCC +
Preference number: 6 (lower is better)
Translates to: GCRGRSILTANR*SSVFTGDAAPS
Trigger: GGAGGGAGCAGCATCTCCTGTGAACACAGAGGAGCACCTGTTTGCTGTTAAAATCGATCTCCCTCGGCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258168.7
ENST00000563804.5
ENST00000564552.1
CDS CAA 72 bp GCAACCTCACCCCGGCCGTCGCCGACTCTCCCTTTCTaGAGTCAGGAAGTGATGCTGGTTACATATGTGTTG +
Preference number: 6 (lower is better)
Translates to: ATSPRPSPTLPF*SQEVMLVTYVL
Trigger: CAACACATATGTAACCAGCATCACTTCCTGACTCAAGAAAGGGAGAGTCGGCGACGGCCGGGGTGAGGTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564552.1
CDS CCA 72 bp CAAGTAGGAGAAAGCTCGTCTCTGATGGTGAAGCTGTaGAGCAGGGCAAGGCCGTCGAACCAATGGTTGTAT +
Preference number: 6 (lower is better)
Translates to: QVGESSSLMVKL*SRARPSNQWLY
Trigger: ATACAACCATTGGTTCGACGGCCTTGCCCTGCTCCACAGCTTCACCATCAGAGACGAGCTTTCTCCTACTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563804.5
CDS CAA 90 bp CTTCCCTCCTTCACATCTCTGTCTCTCCTGATGCCGTTTCTGCCTTaGCTTTTTCCTTTTTGGCTGGCTCTCACTTGTCCCTCTCCAAGA +
Preference number: 6 (lower is better)
Translates to: LPSFTSLSLLMPFLP*LFPFWLALTCPSPR
Trigger: TCTTGGAGAGGGACAAGTGAGAGCCAGCCAAAAAGGAAAAAGCAAAGGCAGAAACGGCATCAGGAGAGACAGAGATGTGAAGGAGGGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000258168.7
ENST00000563804.5
ENST00000564552.1
CDS CAA 90 bp CAGGCTCCAGCTGTTCTTTCCTATTCCTGCCAAATATTATATCCATaGCTCAGGGTGCCGAGGGAGATCGATTTTAACAGCAAACAGGTG +
Preference number: 6 (lower is better)
Translates to: QAPAVLSYSCQILYP*LRVPREIDFNSKQV
Trigger: CACCTGTTTGCTGTTAAAATCGATCTCCCTCGGCACCCTGAGCAATGGATATAATATTTGGCAGGAATAGGAAAGAACAGCTGGAGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258168.7
ENST00000563804.5
ENST00000564552.1
CDS CAA 90 bp GGTCCGGATAGGCCATTGTTCCAAACTCAGACACCACAATCCTGTTaGCCTCAATATTGGTGTTGTAGGTATCGCTTCTCAGGTATTTGC +
Preference number: 6 (lower is better)
Translates to: GPDRPLFQTQTPQSC*PQYWCCRYRFSGIC
Trigger: GCAAATACCTGAGAAGCGATACCTACAACACCAATATTGAGGCAAACAGGATTGTGGTGTCTGAGTTTGGAACAATGGCCTATCCGGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258168.7
ENST00000564552.1
CDS GCA 72 bp GGCCATTGTTCCAAACTCAGACACCACAATCCTGTTTaGCTCAATATTGGTGTTGTAGGTATCGCTTCTCAG +
Preference number: 6 (lower is better)
Translates to: GHCSKLRHHNPV*LNIGVVGIASQ
Trigger: CTGAGAAGCGATACCTACAACACCAATATTGAGGCAAACAGGATTGTGGTGTCTGAGTTTGGAACAATGGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258168.7
ENST00000564552.1
CDS CAA 72 bp AGGCCATTGTTCCAAACTCAGACACCACAATCCTGTTaGCCTCAATATTGGTGTTGTAGGTATCGCTTCTCA +
Preference number: 6 (lower is better)
Translates to: RPLFQTQTPQSC*PQYWCCRYRFS
Trigger: TGAGAAGCGATACCTACAACACCAATATTGAGGCAAACAGGATTGTGGTGTCTGAGTTTGGAACAATGGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258168.7
ENST00000564552.1