Pregenerated sensors for BANF1 (Homo sapiens)
Ensembl gene IDs: ENSG00000175334Ensembl transcript IDs: ENST00000445560.6, ENST00000527348.1, ENST00000530204.1, ENST00000533166.5
Found 17 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CCAGAGTCCGTAGCCAGGGCTGCGCGGAAGCTATCACTCCCTCTGTaGCCTTGGCTGAACCAAGACGACACTGCCTGCCTGGAACGGCCA | + |
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Preference number: 5 (lower is better) Translates to: PESVARAARKLSLPL*PWLNQDDTACLERP Trigger: TGGCCGTTCCAGGCAGGCAGTGTCGTCTTGGTTCAGCCAAGGTCACAGAGGGAGTGATAGCTTCCGCGCAGCCCTGGCTACGGACTCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000527348.1 ENST00000530204.1 ENST00000533166.5 |
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| CDS GCA 90 bp | GGCGTCCTTAGTAGGCGCTCCTTTCCGGTCCTTCGCGGGAAGCCCTaGCTTCTAAGGTCTCGCTTCTCGCGCAGTTCTGAGGGAGATAGG | + |
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Preference number: 5 (lower is better) Translates to: GVLSRRSFPVLRGKP*LLRSRFSRSSEGDR Trigger: CCTATCTCCCTCAGAACTGCGCGAGAAGCGAGACCTTAGAAGGCAGGGCTTCCCGCGAAGGACCGGAAAGGAGCGCCTACTAAGGACGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000445560.6 ENST00000530204.1 |
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| CDS GCA 90 bp | CGCAAGCGGGGCAGTGGAAAGATGCCCAGAGTCCGTAGCCAGGGCTaGGCGGAAGCTATCACTCCCTCTGTGACCTTGGCTGAACCAAGA | + |
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Preference number: 5 (lower is better) Translates to: RKRGSGKMPRVRSQG*AEAITPSVTLAEPR Trigger: TCTTGGTTCAGCCAAGGTCACAGAGGGAGTGATAGCTTCCGCGCAGCCCTGGCTACGGACTCTGGGCATCTTTCCACTGCCCCGCTTGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000527348.1 ENST00000530204.1 ENST00000533166.5 |
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| CDS GCA 90 bp | AAACGATCCTGCCTAACAGGTGGCGCAAGCGGGGCAGTGGAAAGATaGCCAGAGTCCGTAGCCAGGGCTGCGCGGAAGCTATCACTCCCT | + |
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Preference number: 5 (lower is better) Translates to: KRSCLTGGASGAVER*PESVARAARKLSLP Trigger: AGGGAGTGATAGCTTCCGCGCAGCCCTGGCTACGGACTCTGGGCATCTTTCCACTGCCCCGCTTGCGCCACCTGTTAGGCAGGATCGTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000527348.1 ENST00000530204.1 ENST00000533166.5 |
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| CDS GCA 90 bp | GAAGCTATCACTCCCTCTGTGACCTTGGCTGAACCAAGACGACACTaGCTGCCTGGAACGGCCACTTGGCGTGGAAAGCTAACCAAAGGG | + |
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Preference number: 5 (lower is better) Translates to: EAITPSVTLAEPRRH*LPGTATWRGKLTKG Trigger: CCCTTTGGTTAGCTTTCCACGCCAAGTGGCCGTTCCAGGCAGGCAGTGTCGTCTTGGTTCAGCCAAGGTCACAGAGGGAGTGATAGCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000527348.1 ENST00000530204.1 ENST00000533166.5 |
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| CDS CCA 90 bp | ACCTTGGCTGAACCAAGACGACACTGCCTGCCTGGAACGGCCACTTaGCGTGGAAAGCTAACCAAAGGGTCTCTCTACCTACAGGGCGAA | + |
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Preference number: 5 (lower is better) Translates to: TLAEPRRHCLPGTAT*RGKLTKGSLYLQGE Trigger: TTCGCCCTGTAGGTAGAGAGACCCTTTGGTTAGCTTTCCACGCCAAGTGGCCGTTCCAGGCAGGCAGTGTCGTCTTGGTTCAGCCAAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000527348.1 ENST00000533166.5 |
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| CDS GCA 72 bp | TGCCTAACAGGTGGCGCAAGCGGGGCAGTGGAAAGATaGCCAGAGTCCGTAGCCAGGGCTGCGCGGAAGCTA | + |
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Preference number: 6 (lower is better) Translates to: CLTGGASGAVER*PESVARAARKL Trigger: TAGCTTCCGCGCAGCCCTGGCTACGGACTCTGGGCATCTTTCCACTGCCCCGCTTGCGCCACCTGTTAGGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000527348.1 ENST00000530204.1 ENST00000533166.5 |
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| CDS CAA 90 bp | GTCCGTAGCCAGGGCTGCGCGGAAGCTATCACTCCCTCTGTGACCTaGGCTGAACCAAGACGACACTGCCTGCCTGGAACGGCCACTTGG | + |
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Preference number: 6 (lower is better) Translates to: VRSQGCAEAITPSVT*AEPRRHCLPGTATW Trigger: CCAAGTGGCCGTTCCAGGCAGGCAGTGTCGTCTTGGTTCAGCCAAGGTCACAGAGGGAGTGATAGCTTCCGCGCAGCCCTGGCTACGGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000527348.1 ENST00000530204.1 ENST00000533166.5 |
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| CDS TCA 72 bp | CTGCGCGGAAGCTATCACTCCCTCTGTGACCTTGGCTaGACCAAGACGACACTGCCTGCCTGGAACGGCCAC | + |
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Preference number: 6 (lower is better) Translates to: LRGSYHSLCDLG*TKTTLPAWNGH Trigger: GTGGCCGTTCCAGGCAGGCAGTGTCGTCTTGGTTCAGCCAAGGTCACAGAGGGAGTGATAGCTTCCGCGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000527348.1 ENST00000530204.1 ENST00000533166.5 |
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| CDS GCA 72 bp | AGTAGGCGCTCCTTTCCGGTCCTTCGCGGGAAGCCCTaGCTTCTAAGGTCTCGCTTCTCGCGCAGTTCTGAG | + |
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Preference number: 6 (lower is better) Translates to: SRRSFPVLRGKP*LLRSRFSRSSE Trigger: CTCAGAACTGCGCGAGAAGCGAGACCTTAGAAGGCAGGGCTTCCCGCGAAGGACCGGAAAGGAGCGCCTACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000445560.6 ENST00000530204.1 |
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| CDS GCA 72 bp | GGCAGTGGAAAGATGCCCAGAGTCCGTAGCCAGGGCTaGGCGGAAGCTATCACTCCCTCTGTGACCTTGGCT | + |
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Preference number: 6 (lower is better) Translates to: GSGKMPRVRSQG*AEAITPSVTLA Trigger: AGCCAAGGTCACAGAGGGAGTGATAGCTTCCGCGCAGCCCTGGCTACGGACTCTGGGCATCTTTCCACTGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000527348.1 ENST00000530204.1 ENST00000533166.5 |
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| CDS CAA 72 bp | CAGGGCTGCGCGGAAGCTATCACTCCCTCTGTGACCTaGGCTGAACCAAGACGACACTGCCTGCCTGGAACG | + |
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Preference number: 6 (lower is better) Translates to: QGCAEAITPSVT*AEPRRHCLPGT Trigger: CGTTCCAGGCAGGCAGTGTCGTCTTGGTTCAGCCAAGGTCACAGAGGGAGTGATAGCTTCCGCGCAGCCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000527348.1 ENST00000530204.1 ENST00000533166.5 |
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| CDS GCA 72 bp | ACTCCCTCTGTGACCTTGGCTGAACCAAGACGACACTaGCTGCCTGGAACGGCCACTTGGCGTGGAAAGCTA | + |
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Preference number: 6 (lower is better) Translates to: TPSVTLAEPRRH*LPGTATWRGKL Trigger: TAGCTTTCCACGCCAAGTGGCCGTTCCAGGCAGGCAGTGTCGTCTTGGTTCAGCCAAGGTCACAGAGGGAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000527348.1 ENST00000530204.1 ENST00000533166.5 |
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| CDS CCA 72 bp | AAGACGACACTGCCTGCCTGGAACGGCCACTTGGCGTaGAAAGCTAACCAAAGGGTCTCTCTACCTACAGGG | + |
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Preference number: 6 (lower is better) Translates to: KTTLPAWNGHLA*KANQRVSLPTG Trigger: CCCTGTAGGTAGAGAGACCCTTTGGTTAGCTTTCCACGCCAAGTGGCCGTTCCAGGCAGGCAGTGTCGTCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000527348.1 ENST00000533166.5 |
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| CDS CCA 72 bp | GAACCAAGACGACACTGCCTGCCTGGAACGGCCACTTaGCGTGGAAAGCTAACCAAAGGGTCTCTCTCAAGC | + |
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Preference number: 6 (lower is better) Translates to: EPRRHCLPGTAT*RGKLTKGSLSS Trigger: GCTTGAGAGAGACCCTTTGGTTAGCTTTCCACGCCAAGTGGCCGTTCCAGGCAGGCAGTGTCGTCTTGGTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000530204.1 |
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| CDS CCA 72 bp | GAACCAAGACGACACTGCCTGCCTGGAACGGCCACTTaGCGTGGAAAGCTAACCAAAGGGTCTCTCTACCTA | + |
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Preference number: 6 (lower is better) Translates to: EPRRHCLPGTAT*RGKLTKGSLYL Trigger: TAGGTAGAGAGACCCTTTGGTTAGCTTTCCACGCCAAGTGGCCGTTCCAGGCAGGCAGTGTCGTCTTGGTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000527348.1 ENST00000533166.5 |
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| CDS CCA 72 bp | AAGACGACACTGCCTGCCTGGAACGGCCACTTGGCGTaGAAAGCTAACCAAAGGGTCTCTCTCAAGCCACTA | + |
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Preference number: 6 (lower is better) Translates to: KTTLPAWNGHLA*KANQRVSLKPL Trigger: TAGTGGCTTGAGAGAGACCCTTTGGTTAGCTTTCCACGCCAAGTGGCCGTTCCAGGCAGGCAGTGTCGTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000530204.1 |
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