Pregenerated sensors for B3GNT2 (Homo sapiens)
Ensembl gene IDs: ENSG00000170340Ensembl transcript IDs: ENST00000301998.5, ENST00000405767.1
Found 9 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GGGTGTCTGGCCCAGCAGGAAGACTCGCACCACCGTTTGGTTCCCTaGGTTGCTTTCTTGGCCCCAGGATTCCCGGATTGCTTGCCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: GCLAQQEDSHHRLVP*VAFLAPGFPDCLPS Trigger: AGAAGGCAAGCAATCCGGGAATCCTGGGGCCAAGAAAGCAACGCAGGGAACCAAACGGTGGTGCGAGTCTTCCTGCTGGGCCAGACACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000301998.5 ENST00000405767.1 |
||
| CDS GCA 90 bp | TCATTTCTCATATCTCTCTGGCTGTCCCATCTGTTGCCTAGTCCTTaGCAGCCCCTTCCAGGTTCTGCTCGGATAAACAGAGACAGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: SFLISLWLSHLLPSP*QPLPGSARINRDRD Trigger: GTCTCTGTCTCTGTTTATCCGAGCAGAACCTGGAAGGGGCTGGCAAGGACTAGGCAACAGATGGGACAGCCAGAGAGATATGAGAAATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000405767.1 |
||
| CDS CAA 72 bp | CGGCCCGGCGGTGTCGGCGGCAGGGACTGCTCCGGCTaGGCTCTGCTAGCCTCCGGCACTTGTTGCCGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: RPGGVGGRDCSG*ALLASGTCCRC Trigger: GCAGCGGCAACAAGTGCCGGAGGCTAGCAGAGCCAAGCCGGAGCAGTCCCTGCCGCCGACACCGCCGGGCCG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301998.5 |
||
| CDS GCA 72 bp | GCCCAGCAGGAAGACTCGCACCACCGTTTGGTTCCCTaGGTTGCTTTCTTGGCCCCAGGATTCCCGGATTGC | + |
|
Preference number: 6 (lower is better) Translates to: AQQEDSHHRLVP*VAFLAPGFPDC Trigger: GCAATCCGGGAATCCTGGGGCCAAGAAAGCAACGCAGGGAACCAAACGGTGGTGCGAGTCTTCCTGCTGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000301998.5 ENST00000405767.1 |
||
| CDS CCA 72 bp | GGTGTCTGGCCCAGCAGGAAGACTCGCACCACCGTTTaGTTCCCTGCGTTGCTTTCTTGGCCCCAGGATTCC | + |
|
Preference number: 6 (lower is better) Translates to: GVWPSRKTRTTV*FPALLSWPQDS Trigger: GGAATCCTGGGGCCAAGAAAGCAACGCAGGGAACCAAACGGTGGTGCGAGTCTTCCTGCTGGGCCAGACACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000301998.5 ENST00000405767.1 |
||
| CDS CAA 72 bp | GGGTGTCTGGCCCAGCAGGAAGACTCGCACCACCGTTaGGTTCCCTGCGTTGCTTTCTTGGCCCCAGGATTC | + |
|
Preference number: 6 (lower is better) Translates to: GCLAQQEDSHHR*VPCVAFLAPGF Trigger: GAATCCTGGGGCCAAGAAAGCAACGCAGGGAACCAAACGGTGGTGCGAGTCTTCCTGCTGGGCCAGACACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000301998.5 ENST00000405767.1 |
||
| CDS CAA 72 bp | AGCAGGAAGACTCGCACCACCGTTTGGTTCCCTGCGTaGCTTTCTTGGCCCCAGGATTCCCGGATTGCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: SRKTRTTVWFPA*LSWPQDSRIAC Trigger: GCAAGCAATCCGGGAATCCTGGGGCCAAGAAAGCAACGCAGGGAACCAAACGGTGGTGCGAGTCTTCCTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000301998.5 ENST00000405767.1 |
||
| CDS GCA 72 bp | CTGCCGGTTCAGCTTCTCTTGCTCTCGGTTCCAGTATaGCTCGGGAGGGGTAGATATCTTCCAGAACTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: LPVQLLLLSVPV*LGRGRYLPELL Trigger: GAGAAGTTCTGGAAGATATCTACCCCTCCCGAGGCATACTGGAACCGAGAGCAAGAGAAGCTGAACCGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000301998.5 ENST00000405767.1 |
||
| CDS CAA 72 bp | AAATACAGCAGAAAGTCTTTAAATCTGTCCGGCAAGTaGTTAAAACCCGTAACCACCGACGTGACCCTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: KYSRKSLNLSGK*LKPVTTDVTLR Trigger: CCTGAGGGTCACGTCGGTGGTTACGGGTTTTAACAACTTGCCGGACAGATTTAAAGACTTTCTGCTGTATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000301998.5 ENST00000405767.1 |
||