RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ATRX (Homo sapiens)

Ensembl gene IDs: ENSG00000085224

Ensembl transcript IDs: ENST00000373344.11, ENST00000395603.7, ENST00000460639.2, ENST00000480283.5, ENST00000493470.2, ENST00000622960.1, ENST00000623242.3, ENST00000623316.1, ENST00000623321.3, ENST00000623706.3, ENST00000624032.3, ENST00000624166.3, ENST00000624193.1, ENST00000624668.3, ENST00000637959.1, ENST00000675732.1, ENST00000675908.1

Found 781 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TTCCCAGAAAGCTTATCGACACCATCAGTGGAAGCACTTGCTTGCTaGTTCTTAGGAAGTCGATCTCTTAATTCCATGATGGTCGTGTCT +
Preference number: 1 (lower is better)
Translates to: FPESLSTPSVEALAC*FLGSRSLNSMMVVS
Trigger: AGACACGACCATCATGGAATTAAGAGATCGACTTCCTAAGAAGCAGCAAGCAAGTGCTTCCACTGATGGTGTCGATAAGCTTTCTGGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR GCA 90 bp TCTTTCCCAGAAAGCTTATCGACACCATCAGTGGAAGCACTTGCTTaGTGCTTCTTAGGAAGTCGATCTCTTAATTCCATGATGGTCGTG +
Preference number: 1 (lower is better)
Translates to: SFPESLSTPSVEALA*CFLGSRSLNSMMVV
Trigger: CACGACCATCATGGAATTAAGAGATCGACTTCCTAAGAAGCAGCAAGCAAGTGCTTCCACTGATGGTGTCGATAAGCTTTCTGGGAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR GCA 90 bp ACGCATGGTCAGTCCCTTCTTCTCTGCTTCATACTCAGCCCAAGCTaGTTTTCTTTCTTCTTCAGTCAACTCTTCTTCTTCTTTGTGGTC +
Preference number: 1 (lower is better)
Translates to: THGQSLLLCFILSPS*FSFFFSQLFFFFVV
Trigger: GACCACAAAGAAGAAGAAGAGTTGACTGAAGAAGAAAGAAAAGCAGCTTGGGCTGAGTATGAAGCAGAGAAGAAGGGACTGACCATGCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR TCA 90 bp GTTTCCTGTTTCATCCACATTTCCTTCACCACCTCCCCGAGATCTTaGATTCCAGACCTTAATCACTTCAACATCATTGTCACTGCCACT +
Preference number: 1 (lower is better)
Translates to: VSCFIHISFTTSPRS*IPDLNHFNIIVTAT
Trigger: AGTGGCAGTGACAATGATGTTGAAGTGATTAAGGTCTGGAATTCAAGATCTCGGGGAGGTGGTGAAGGAAATGTGGATGAAACAGGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR GCA 90 bp CATGATCAAATTTGGGGGCTTTGGCATCATGAGGTGACCCAGTGTTaGTTGTTGATAAGTCATTTGTTGCTGTTGCTGCTGATTGTACTG +
Preference number: 1 (lower is better)
Translates to: HDQIWGLWHHEVTQC*LLISHLLLLLLIVL
Trigger: CAGTACAATCAGCAGCAACAGCAACAAATGACTTATCAACAAGCAACACTGGGTCACCTCATGATGCCAAAGCCCCCAAATTTGATCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR TCA 90 bp GCTGCAACAACTGTTCTAAATTCTCAAATACGCTGTTACATGCAGTaGCCAAGTCCAACAAAGGCTCTGGGTGACAAATGTAGCAATACC +
Preference number: 1 (lower is better)
Translates to: AATTVLNSQIRCYMQ*PSPTKALGDKCSNT
Trigger: GGTATTGCTACATTTGTCACCCAGAGCCTTTGTTGGACTTGGTCACTGCATGTAACAGCGTATTTGAGAATTTAGAACAGTTGTTGCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR TCA 90 bp CACTTCTTGTTCAGTTCCACTGCTGCCATCCCCTTGATGATCAACTaGACTCTGAACTTCCATAGCAGTCTCAAGATTCTCAAAAATGTC +
Preference number: 1 (lower is better)
Translates to: HFLFSSTAAIPLMIN*TLNFHSSLKILKNV
Trigger: GACATTTTTGAGAATCTTGAGACTGCTATGGAAGTTCAGAGTTCAGTTGATCATCAAGGGGATGGCAGCAGTGGAACTGAACAAGAAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR TCA 90 bp CTTGCAATGAAGGGTGTCTATAAATGGAATCTTTTTGAAAATGATTaGCCTGTTGTCCACAAGCAGTGCAGCTCACAATCCCATGAAGCC +
Preference number: 1 (lower is better)
Translates to: LAMKGVYKWNLFEND*PVVHKQCSSQSHEA
Trigger: GGCTTCATGGGATTGTGAGCTGCACTGCTTGTGGACAACAGGTCAATCATTTTCAAAAAGATTCCATTTATAGACACCCTTCATTGCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR TCA 90 bp AAAATGACGCTCCACCTGCTGCTGATCAACAACTCGAAAAGACAGTaGCTGCTTAGTTACTTGCCGATCATAAATCTTATCTTCCATGGT +
Preference number: 1 (lower is better)
Translates to: KMTLHLLLINNSKRQ*LLSYLPIINLIFHG
Trigger: ACCATGGAAGATAAGATTTATGATCGGCAAGTAACTAAGCAGTCACTGTCTTTTCGAGTTGTTGATCAGCAGCAGGTGGAGCGTCATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR CCA 90 bp AATCTGCTGGTAGTTAGAAGGATTCATGATCAAATTTGGGGGCTTTaGCATCATGAGGTGACCCAGTGTTGCTTGTTGATAAGTCATTTG +
Preference number: 1 (lower is better)
Translates to: NLLVVRRIHDQIWGL*HHEVTQCCLLISHL
Trigger: CAAATGACTTATCAACAAGCAACACTGGGTCACCTCATGATGCCAAAGCCCCCAAATTTGATCATGAATCCTTCTAACTACCAGCAGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR CCA 90 bp TCTCATATCAATCTGCTGGTAGTTAGAAGGATTCATGATCAAATTTaGGGGCTTTGGCATCATGAGGTGACCCAGTGTTGCTTGTTGATA +
Preference number: 1 (lower is better)
Translates to: SHINLLVVRRIHDQI*GLWHHEVTQCCLLI
Trigger: TATCAACAAGCAACACTGGGTCACCTCATGATGCCAAAGCCCCCAAATTTGATCATGAATCCTTCTAACTACCAGCAGATTGATATGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR TCA 90 bp TCCATCGCTCGAAACTCGGAATTTAAGTCTTCTTCCAATGCAAGATaGGCCTTCTTAATATCAGCCAACACAGACTTAAAAGCCTTAAGC +
Preference number: 1 (lower is better)
Translates to: SIARNSEFKSSSNAR*AFLISANTDLKALS
Trigger: GCTTAAGGCTTTTAAGTCTGTGTTGGCTGATATTAAGAAGGCTCATCTTGCATTGGAAGAAGACTTAAATTCCGAGTTTCGAGCGATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR GCA 90 bp TTGACCTGTTTTACTGGTAGAATAAGTCTCTATAGCCTCACAACATaGTACTCTCAAAGGAAACAAGGGCTACTGGGACAGAATGTAACT +
Preference number: 1 (lower is better)
Translates to: LTCFTGRISLYSLTT*YSQRKQGLLGQNVT
Trigger: AGTTACATTCTGTCCCAGTAGCCCTTGTTTCCTTTGAGAGTAGCATGTTGTGAGGCTATAGAGACTTATTCTACCAGTAAAACAGGTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373344.11
3UTR GCA 90 bp TTGTGGACAACTCCTTTCGACCAAGGTTGCGTAGAATGCATTTCTTaGAGAAAGCATTATGGCAAAAGTCACAACAAATCAAGTTTCCAC +
Preference number: 1 (lower is better)
Translates to: LWTTPFDQGCVECIS*RKHYGKSHNKSSFH
Trigger: GTGGAAACTTGATTTGTTGTGACTTTTGCCATAATGCTTTCTGCAAGAAATGCATTCTACGCAACCTTGGTCGAAAGGAGTTGTCCACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR GCA 90 bp GGTTGTTTTCATCCATTATTGTGGACAACTCCTTTCGACCAAGGTTaGGTAGAATGCATTTCTTGCAGAAAGCATTATGGCAAAAGTCAC +
Preference number: 1 (lower is better)
Translates to: GCFHPLLWTTPFDQG*VECISCRKHYGKSH
Trigger: GTGACTTTTGCCATAATGCTTTCTGCAAGAAATGCATTCTACGCAACCTTGGTCGAAAGGAGTTGTCCACAATAATGGATGAAAACAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR GCA 90 bp TATATCCTCAAGAGGTTGAATCCTCACTGCTGTCACACTGTTTGTTaGTTCTACAACTTTTTCTCTTCCTTGATTAATGAGGTCCTCCAG +
Preference number: 1 (lower is better)
Translates to: YILKRLNPHCCHTVC*FYNFFSSLINEVLQ
Trigger: CTGGAGGACCTCATTAATCAAGGAAGAGAAAAAGTTGTAGAAGCAACAAACAGTGTGACAGCAGTGAGGATTCAACCTCTTGAGGATATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR CCA 90 bp GGTGACAAATGTAGCAATACCATTGGTTGTTTTCATCCATTATTGTaGACAACTCCTTTCGACCAAGGTTGCGTAGAATGCATTTCTTGC +
Preference number: 1 (lower is better)
Translates to: GDKCSNTIGCFHPLL*TTPFDQGCVECISC
Trigger: GCAAGAAATGCATTCTACGCAACCTTGGTCGAAAGGAGTTGTCCACAATAATGGATGAAAACAACCAATGGTATTGCTACATTTGTCACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR CCA 90 bp CTCAAATACGCTGTTACATGCAGTGACCAAGTCCAACAAAGGCTCTaGGTGACAAATGTAGCAATACCATTGGTTGTTTTCATCCATTAT +
Preference number: 1 (lower is better)
Translates to: LKYAVTCSDQVQQRL*VTNVAIPLVVFIHY
Trigger: ATAATGGATGAAAACAACCAATGGTATTGCTACATTTGTCACCCAGAGCCTTTGTTGGACTTGGTCACTGCATGTAACAGCGTATTTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR GCA 90 bp CATCCATTATTGTGGACAACTCCTTTCGACCAAGGTTGCGTAGAATaGATTTCTTGCAGAAAGCATTATGGCAAAAGTCACAACAAATCA +
Preference number: 1 (lower is better)
Translates to: HPLLWTTPFDQGCVE*ISCRKHYGKSHNKS
Trigger: TGATTTGTTGTGACTTTTGCCATAATGCTTTCTGCAAGAAATGCATTCTACGCAACCTTGGTCGAAAGGAGTTGTCCACAATAATGGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR TCA 90 bp CCACCGGTACTTTTATTTGTTCTTTGTTCCTCTGTTGGAACATTCTaGTGCATGTGCTCACTATCTACCTGTTTTCTTGAAAGTTTAGCT +
Preference number: 1 (lower is better)
Translates to: PPVLLFVLCSSVGTF*CMCSLSTCFLESLA
Trigger: AGCTAAACTTTCAAGAAAACAGGTAGATAGTGAGCACATGCATCAGAATGTTCCAACAGAGGAACAAAGAACAAATAAAAGTACCGGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR TCA 90 bp TTCATGTTCTCCTTCCATACAGCTGAAATTATATCCTCAAGAGGTTaGATCCTCACTGCTGTCACACTGTTTGTTGCTTCTACAACTTTT +
Preference number: 1 (lower is better)
Translates to: FMFSFHTAEIISSRG*ILTAVTLFVASTTF
Trigger: AAAAGTTGTAGAAGCAACAAACAGTGTGACAGCAGTGAGGATTCAACCTCTTGAGGATATAATTTCAGCTGTATGGAAGGAGAACATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR TCA 90 bp GGCTTAATTTTCTGTTCATCGCTGCTTCCCTCACCTATAGAATTCTaGTCATCATCTTCTATATCAGAAGAAGATGAGGATGTAATGTCA +
Preference number: 1 (lower is better)
Translates to: GLIFCSSLLPSPIEF*SSSSISEEDEDVMS
Trigger: TGACATTACATCCTCATCTTCTTCTGATATAGAAGATGATGATCAGAATTCTATAGGTGAGGGAAGCAGCGATGAACAGAAAATTAAGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR GCA 90 bp ATGTTAGAAATCAGATACCCTTATGCCCATTATTCCAAAATTCCATaGACTATACCATGCTGTCTTCTTGTTGAAGATTATGAGCATGGG +
Preference number: 1 (lower is better)
Translates to: MLEIRYPYAHYSKIP*TIPCCLLVEDYEHG
Trigger: CCCATGCTCATAATCTTCAACAAGAAGACAGCATGGTATAGTGCATGGAATTTTGGAATAATGGGCATAAGGGTATCTGATTTCTAACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493470.2
3UTR GCA 90 bp TCATCATCTTCTATATCAGAAGAAGATGAGGATGTAATGTCAGCTTaGTTCCTTTTAGTGCTTGTTCTTAGGGAGTTTCTCTTTTTCTCC +
Preference number: 1 (lower is better)
Translates to: SSSSISEEDEDVMSA*FLLVLVLREFLFFS
Trigger: GGAGAAAAAGAGAAACTCCCTAAGAACAAGCACTAAAAGGAAGCAAGCTGACATTACATCCTCATCTTCTTCTGATATAGAAGATGATGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR CCA 90 bp TTGTCCAAAGCGATAAACTCTGAATATACTCTGGATGTCATAAGATaGATTCCAAGAAGCGTCGAATATAATTACTCGATTAGCAGCTAC +
Preference number: 1 (lower is better)
Translates to: LSKAINSEYTLDVIR*IPRSVEYNYSISSY
Trigger: GTAGCTGCTAATCGAGTAATTATATTCGACGCTTCTTGGAATCCATCTTATGACATCCAGAGTATATTCAGAGTTTATCGCTTTGGACAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR CCA 90 bp CAAGCTGCTTTTCTTTCTTCTTCAGTCAACTCTTCTTCTTCTTTGTaGTCCAAAAGAGAATCATGTTCATGGTATCCTACAATGTGTTCT +
Preference number: 1 (lower is better)
Translates to: QAAFLSSSVNSSSSL*SKRESCSWYPTMCS
Trigger: AGAACACATTGTAGGATACCATGAACATGATTCTCTTTTGGACCACAAAGAAGAAGAAGAGTTGACTGAAGAAGAAAGAAAAGCAGCTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR TCA 90 bp ACAATATCCATGTCTAAATCTTCAGAAGTGTTGGCAGGTTCATATTaGGGTTCTTCTTTTCTATCAGATTTCTTATGTTCACCACCGGTA +
Preference number: 1 (lower is better)
Translates to: TISMSKSSEVLAGSY*GSSFLSDFLCSPPV
Trigger: TACCGGTGGTGAACATAAGAAATCTGATAGAAAAGAAGAACCTCAATATGAACCTGCCAACACTTCTGAAGATTTAGACATGGATATTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR TCA 90 bp GGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTaGAAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAG +
Preference number: 1 (lower is better)
Translates to: GNLWSCYYYGRTCFH*KQFEISSVLSVCKK
Trigger: CTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
3UTR GCA 90 bp ATGACACAGACAGTTGTTAAAAATGTTAGAAATCAGATACCCTTATaGCCATTATTCCAAAATTCCATGCACTATACCATGCTGTCTTCT +
Preference number: 1 (lower is better)
Translates to: MTQTVVKNVRNQIPL*PLFQNSMHYTMLSS
Trigger: AGAAGACAGCATGGTATAGTGCATGGAATTTTGGAATAATGGGCATAAGGGTATCTGATTTCTAACATTTTTAACAACTGTCTGTGTCAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493470.2
3UTR CAA 90 bp ATCACATTGATTTCCCTTGGGAAGGTCCTGGATTTTTGCTTCTCATaGGGGGTGGTGCACGCTGTAATGGTGGTGGCTGCATACCACCAG +
Preference number: 2 (lower is better)
Translates to: ITLISLGKVLDFCFS*GVVHAVMVVAAYHQ
Trigger: CTGGTGGTATGCAGCCACCACCATTACAGCGTGCACCACCCCCAATGAGAAGCAAAAATCCAGGACCTTCCCAAGGGAAATCAATGTGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR-3UTR TCA 90 bp AAAGCAGTATTAAGAGGACAAACCACTAACGCCGTGCTGAAATCCAGTTTGTCAGGTAGGAGGATCACTTaGGCCCAAGAGTTCGAGGCC +
Preference number: 2 (lower is better)
Translates to: KAVLRGQTTNAVLKSSLSGRRIT*AQEFEA
Trigger: GGCCTCGAACTCTTGGGCTCAAGTGATCCTCCTACC...TGACAAACTGGATTTCAGCACGGCGTTAGTGGTTTGTCCTCTTAATACTGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623242.3
3UTR CAA 90 bp CAAATTTGGGGGCTTTGGCATCATGAGGTGACCCAGTGTTGCTTGTaGATAAGTCATTTGTTGCTGTTGCTGCTGATTGTACTGCTGCTG +
Preference number: 2 (lower is better)
Translates to: QIWGLWHHEVTQCCL*ISHLLLLLLIVLLL
Trigger: CAGCAGCAGTACAATCAGCAGCAACAGCAACAAATGACTTATCAACAAGCAACACTGGGTCACCTCATGATGCCAAAGCCCCCAAATTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR-3UTR CCA 90 bp CTTCTCTGCTTCATACTCAGCCCAAGCTGCTTTTCTTTCTTCTTCAGTCAACTCCCAACTGGTAACAGTTaGCCAGAGTGTACTGCCTTC +
Preference number: 2 (lower is better)
Translates to: LLCFILSPSCFSFFFSQLPTGNS*PECTAF
Trigger: GAAGGCAGTACACTCTGGCCAACTGTTACCAGTTGG...GAGTTGACTGAAGAAGAAAGAAAAGCAGCTTGGGCTGAGTATGAAGCAGAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR CAA 90 bp GATCAAATTTGGGGGCTTTGGCATCATGAGGTGACCCAGTGTTGCTaGTTGATAAGTCATTTGTTGCTGTTGCTGCTGATTGTACTGCTG +
Preference number: 2 (lower is better)
Translates to: DQIWGLWHHEVTQCC*LISHLLLLLLIVLL
Trigger: CAGCAGTACAATCAGCAGCAACAGCAACAAATGACTTATCAACAAGCAACACTGGGTCACCTCATGATGCCAAAGCCCCCAAATTTGATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR-3UTR GCA 90 bp TCCACATTTCCTTCACCACCTCCCCGAGATCTTGAATTCCAGACCTTAATCACTATCAGTGGAAGCACTTaGTTGCTGCTTCTTAGGAAG +
Preference number: 2 (lower is better)
Translates to: STFPSPPPRDLEFQTLITISGST*LLLLRK
Trigger: CTTCCTAAGAAGCAGCAAGCAAGTGCTTCCACTGAT...AGTGATTAAGGTCTGGAATTCAAGATCTCGGGGAGGTGGTGAAGGAAATGTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR-3UTR CCA 90 bp TCTAAAACCTCAGCATCAGCATCTGTAACAAAATCTTTGTACCAGTCTGGAGCTTTGCAGACCTTGTTCTaGGCCGCTGTTCATCTTCGG +
Preference number: 2 (lower is better)
Translates to: SKTSASASVTKSLYQSGALQTLF*AAVHLR
Trigger: CCGAAGATGAACAGCGGCCCAGAACAAGGTCTGCAA...AGCTCCAGACTGGTACAAAGATTTTGTTACAGATGCTGATGCTGAGGTTTTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR CAA 90 bp ATTTCTATACATCTCATAGCCTATGATCATAACACCACCATCTTCTaGCCACCTCTGCAGCATGTAGCTTCTCTCCTGAGGACGTTTCAC +
Preference number: 2 (lower is better)
Translates to: ISIHLIAYDHNTTIF*PPLQHVASLLRTFH
Trigger: GTGAAACGTCCTCAGGAGAGAAGCTACATGCTGCAGAGGTGGCAAGAAGATGGTGGTGTTATGATCATAGGCTATGAGATGTATAGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR-3UTR CCA 90 bp TCCACATTTCCTTCACCACCTCCCCGAGATCTTGAATTCCAGACCTTAATCACTAACTGGAGTTCATGTTaGCTGTGGTCTCAATCAGTT +
Preference number: 2 (lower is better)
Translates to: STFPSPPPRDLEFQTLITNWSSC*LWSQSV
Trigger: AACTGATTGAGACCACAGCCAACATGAACTCCAGTT...AGTGATTAAGGTCTGGAATTCAAGATCTCGGGGAGGTGGTGAAGGAAATGTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR CAA 90 bp CCAGAATGCTCTAAAACCTCAGCATCAGCATCTGTAACAAAATCTTaGTACCAGTCTGGAGCTGGGCTGCTTGGATTAGAAGAAGAAGTA +
Preference number: 2 (lower is better)
Translates to: PECSKTSASASVTKS*YQSGAGLLGLEEEV
Trigger: TACTTCTTCTTCTAATCCAAGCAGCCCAGCTCCAGACTGGTACAAAGATTTTGTTACAGATGCTGATGCTGAGGTTTTAGAGCATTCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR-3UTR TCA 90 bp CAGTGTTGCTTGTTGATAAGTCATTTGTTGCTGTTGCTGCTGATTGTACTGCTGCCCTTGATGATCAACTaGACTCTGAACTTCCATAGC +
Preference number: 2 (lower is better)
Translates to: QCCLLISHLLLLLLIVLLPLMIN*TLNFHS
Trigger: GCTATGGAAGTTCAGAGTTCAGTTGATCATCAAGGG...CAGCAGTACAATCAGCAGCAACAGCAACAAATGACTTATCAACAAGCAACACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR-3UTR GCA 90 bp TCCACATTTCCTTCACCACCTCCCCGAGATCTTGAATTCCAGACCTTAATCACTCACCTTCACTATTATTaGCCACACCTGTTAAGTGAT +
Preference number: 2 (lower is better)
Translates to: STFPSPPPRDLEFQTLITHLHYY*PHLLSD
Trigger: ATCACTTAACAGGTGTGGGCAATAATAGTGAAGGTG...AGTGATTAAGGTCTGGAATTCAAGATCTCGGGGAGGTGGTGAAGGAAATGTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR-3UTR GCA 90 bp CTTCTCTGCTTCATACTCAGCCCAAGCTGCTTTTCTTTCTTCTTCAGTCAACTCTATCTGAAGGAGCTCTaGAAGTATGGTATCCTTTGG +
Preference number: 2 (lower is better)
Translates to: LLCFILSPSCFSFFFSQLYLKEL*KYGILW
Trigger: CCAAAGGATACCATACTTGCAGAGCTCCTTCAGATA...GAGTTGACTGAAGAAGAAAGAAAAGCAGCTTGGGCTGAGTATGAAGCAGAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR-3UTR TCA 90 bp TCCACATTTCCTTCACCACCTCCCCGAGATCTTGAATTCCAGACCTTAATCACTCATTTCATCAGAATCTaGATTTTGATCCACAGTCTC +
Preference number: 2 (lower is better)
Translates to: STFPSPPPRDLEFQTLITHFIRI*ILIHSL
Trigger: GAGACTGTGGATCAAAATTCAGATTCTGATGAAATG...AGTGATTAAGGTCTGGAATTCAAGATCTCGGGGAGGTGGTGAAGGAAATGTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR-3UTR TCA 90 bp CTTCTCTGCTTCATACTCAGCCCAAGCTGCTTTTCTTTCTTCTTCAGTCAACTCTTCAGTGCCATCAGATaGAGATTCATACTGTTGTTC +
Preference number: 2 (lower is better)
Translates to: LLCFILSPSCFSFFFSQLFSAIR*RFILLF
Trigger: GAACAACAGTATGAATCTTCATCTGATGGCACTGAA...GAGTTGACTGAAGAAGAAAGAAAAGCAGCTTGGGCTGAGTATGAAGCAGAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR-3UTR TCA 90 bp TCTAAAACCTCAGCATCAGCATCTGTAACAAAATCTTTGTACCAGTCTGGAGCTTTCTGGCTCATCATCTaGAGATCCATCCTCATCAGA +
Preference number: 2 (lower is better)
Translates to: SKTSASASVTKSLYQSGAFWLII*RSILIR
Trigger: TCTGATGAGGATGGATCTTCAGATGATGAGCCAGAA...AGCTCCAGACTGGTACAAAGATTTTGTTACAGATGCTGATGCTGAGGTTTTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR-3UTR TCA 90 bp TCCACATTTCCTTCACCACCTCCCCGAGATCTTGAATTCCAGACCTTAATCACTCTAACTCCTGATTCCTaGAAATCAGAATCTTCTGAA +
Preference number: 2 (lower is better)
Translates to: STFPSPPPRDLEFQTLITLTPDS*KSESSE
Trigger: TTCAGAAGATTCTGATTTTCAGGAATCAGGAGTTAG...AGTGATTAAGGTCTGGAATTCAAGATCTCGGGGAGGTGGTGAAGGAAATGTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR-3UTR CCA 90 bp CTTCTCTGCTTCATACTCAGCCCAAGCTGCTTTTCTTTCTTCTTCAGTCAACTCAACAAAATCAGGGCCTaGATCAACCAAAGCTTTGTT +
Preference number: 2 (lower is better)
Translates to: LLCFILSPSCFSFFFSQLNKIRA*INQSFV
Trigger: AACAAAGCTTTGGTTGATCCAGGCCCTGATTTTGTT...GAGTTGACTGAAGAAGAAAGAAAAGCAGCTTGGGCTGAGTATGAAGCAGAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR CAA 90 bp ATGCCCATTATTCCAAAATTCCATGCACTATACCATGCTGTCTTCTaGTTGAAGATTATGAGCATGGGGTATGCTATTGTCCAGGAAGTG +
Preference number: 2 (lower is better)
Translates to: MPIIPKFHALYHAVF*LKIMSMGYAIVQEV
Trigger: CACTTCCTGGACAATAGCATACCCCATGCTCATAATCTTCAACAAGAAGACAGCATGGTATAGTGCATGGAATTTTGGAATAATGGGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493470.2
3UTR CAA 90 bp CTGGGTGACAAATGTAGCAATACCATTGGTTGTTTTCATCCATTATaGTGGACAACTCCTTTCGACCAAGGTTGCGTAGAATGCATTTCT +
Preference number: 2 (lower is better)
Translates to: LGDKCSNTIGCFHPL*WTTPFDQGCVECIS
Trigger: AGAAATGCATTCTACGCAACCTTGGTCGAAAGGAGTTGTCCACAATAATGGATGAAAACAACCAATGGTATTGCTACATTTGTCACCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR-3UTR TCA 90 bp AAAGCAGTATTAAGAGGACAAACCACTAACGCCGTGCTGAAATCCAGTTTGTCATCTAGGCAACATCACTaGCAAATGTCAGGAAGAAAT +
Preference number: 2 (lower is better)
Translates to: KAVLRGQTTNAVLKSSLSSRQHH*QMSGRN
Trigger: ATTTCTTCCTGACATTTGTCAGTGATGTTGCCTAGA...TGACAAACTGGATTTCAGCACGGCGTTAGTGGTTTGTCCTCTTAATACTGCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR-3UTR TCA 90 bp CTTCTCTGCTTCATACTCAGCCCAAGCTGCTTTTCTTTCTTCTTCAGTCAACTCAAAATCAGAATCTTCTaGATCTTCACTGCTCACCTT +
Preference number: 2 (lower is better)
Translates to: LLCFILSPSCFSFFFSQLKIRIF*IFTAHL
Trigger: AAGGTGAGCAGTGAAGATTCAGAAGATTCTGATTTT...GAGTTGACTGAAGAAGAAAGAAAAGCAGCTTGGGCTGAGTATGAAGCAGAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR-3UTR TCA 90 bp CAGTGTTGCTTGTTGATAAGTCATTTGTTGCTGTTGCTGCTGATTGTACTGCTGTTCGCTGAACACAGCTaGTTAACATCTGTTGTTTTG +
Preference number: 2 (lower is better)
Translates to: QCCLLISHLLLLLLIVLLFAEHS*LTSVVL
Trigger: CAAAACAACAGATGTTAATCAGCTGTGTTCAGCGAA...CAGCAGTACAATCAGCAGCAACAGCAACAAATGACTTATCAACAAGCAACACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR-3UTR GCA 90 bp AAAGCAGTATTAAGAGGACAAACCACTAACGCCGTGCTGAAATCCAGTTTGTCACAAGGTTGCGTAGAATaGATTTCTTGCAGAAAGCAT +
Preference number: 2 (lower is better)
Translates to: KAVLRGQTTNAVLKSSLSQGCVE*ISCRKH
Trigger: ATGCTTTCTGCAAGAAATGCATTCTACGCAACCTTG...TGACAAACTGGATTTCAGCACGGCGTTAGTGGTTTGTCCTCTTAATACTGCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR CAA 90 bp ATTGTGGACAACTCCTTTCGACCAAGGTTGCGTAGAATGCATTTCTaGCAGAAAGCATTATGGCAAAAGTCACAACAAATCAAGTTTCCA +
Preference number: 2 (lower is better)
Translates to: IVDNSFRPRLRRMHF*QKALWQKSQQIKFP
Trigger: TGGAAACTTGATTTGTTGTGACTTTTGCCATAATGCTTTCTGCAAGAAATGCATTCTACGCAACCTTGGTCGAAAGGAGTTGTCCACAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR CAA 90 bp TGGTTGTTTTCATCCATTATTGTGGACAACTCCTTTCGACCAAGGTaGCGTAGAATGCATTTCTTGCAGAAAGCATTATGGCAAAAGTCA +
Preference number: 2 (lower is better)
Translates to: WLFSSIIVDNSFRPR*RRMHFLQKALWQKS
Trigger: TGACTTTTGCCATAATGCTTTCTGCAAGAAATGCATTCTACGCAACCTTGGTCGAAAGGAGTTGTCCACAATAATGGATGAAAACAACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR CAA 90 bp GTTTCTTCATCTTCATCTAAAACCAACTTGGTTGTTATTGGACACTaGGTGGGTGAAGCATCTTCAATTTCTATCACGCCTGTAATCCCA +
Preference number: 2 (lower is better)
Translates to: VSSSSSKTNLVVIGH*VGEASSISITPVIP
Trigger: TGGGATTACAGGCGTGATAGAAATTGAAGATGCTTCACCCACCAAGTGTCCAATAACAACCAAGTTGGTTTTAGATGAAGATGAAGAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623242.3
3UTR CAA 90 bp GTTCTTTGGTTTCTTCATCTTCATCTAAAACCAACTTGGTTGTTATaGGACACTTGGTGGGTGAAGCATCTTCAATTTCTATCACGCCTG +
Preference number: 2 (lower is better)
Translates to: VLWFLHLHLKPTWLL*DTWWVKHLQFLSRL
Trigger: CAGGCGTGATAGAAATTGAAGATGCTTCACCCACCAAGTGTCCAATAACAACCAAGTTGGTTTTAGATGAAGATGAAGAAACCAAAGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623242.3
3UTR-3UTR TCA 90 bp AGCTGCTTTTCTTTCTTCTTCAGTCAACTCTTCTTCTTCTTTGTGGTCCAAAAGTGGACACTTGGTGGGTaGAGCATCTTCAATTTCTAT +
Preference number: 2 (lower is better)
Translates to: SCFSFFFSQLFFFFVVQKWTLGG*SIFNFY
Trigger: ATAGAAATTGAAGATGCTTCACCCACCAAGTGTCCA...CTTTTGGACCACAAAGAAGAAGAAGAGTTGACTGAAGAAGAAAGAAAAGCAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR-3UTR GCA 90 bp TCTAAAACCTCAGCATCAGCATCTGTAACAAAATCTTTGTACCAGTCTGGAGCTAAATACGCTGTTACATaGAGTGACCAAGTCCAACAA +
Preference number: 2 (lower is better)
Translates to: SKTSASASVTKSLYQSGAKYAVT*SDQVQQ
Trigger: TTGTTGGACTTGGTCACTGCATGTAACAGCGTATTT...AGCTCCAGACTGGTACAAAGATTTTGTTACAGATGCTGATGCTGAGGTTTTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR-3UTR GCA 90 bp TTTTATTATCTTCAGAACTTTCCTCAGCATCAGATGATGATGAGCCACTTTGTAGTTCAGTTCCACTGCTaGCATCCCCTTGATGATCAA +
Preference number: 2 (lower is better)
Translates to: FYYLQNFPQHQMMMSHFVVQFHC*HPLDDQ
Trigger: TTGATCATCAAGGGGATGGCAGCAGTGGAACTGAAC...TACAAAGTGGCTCATCATCATCTGATGCTGAGGAAAGTTCTGAAGATAATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR CAA 90 bp GTTCTTTGGTTTCTTCATCTTCATCTAAAACCAACTTGGTTGTTATaGGACACTTGGTGGGTGAAGCATCTTCAATTTCTATCACCTCTC +
Preference number: 2 (lower is better)
Translates to: VLWFLHLHLKPTWLL*DTWWVKHLQFLSPL
Trigger: GAGAGGTGATAGAAATTGAAGATGCTTCACCCACCAAGTGTCCAATAACAACCAAGTTGGTTTTAGATGAAGATGAAGAAACCAAAGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR-3UTR CCA 90 bp CATGCACTATACCATGCTGTCTTCTTGTTGAAGATTATGAGCATGGGGTATGCTATAGGACCACCATATTaGATGGCAATTAACAATAGT +
Preference number: 2 (lower is better)
Translates to: HALYHAVFLLKIMSMGYAIGPPY*MAINNS
Trigger: ACTATTGTTAATTGCCATCCAATATGGTGGTCCTAT...AGCATACCCCATGCTCATAATCTTCAACAAGAAGACAGCATGGTATAGTGCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493470.2
3UTR-3UTR CCA 90 bp TATTTAATTTTACAGATGAACTCTCCACTTCTTGTTCAGTTCCACTGCTGCCATGTCCAACAAAGGCTCTaGGTGACAAATGTAGCAATA +
Preference number: 2 (lower is better)
Translates to: YLILQMNSPLLVQFHCCHVQQRL*VTNVAI
Trigger: TATTGCTACATTTGTCACCCAGAGCCTTTGTTGGAC...ATGGCAGCAGTGGAACTGAACAAGAAGTGGAGAGTTCATCTGTAAAATTAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR CAA 90 bp AGGAAACAAGGGCTACTGGGACAGAATGTAACTGCTCTTAAAGTTTaGTTTGGGGCACATAAATATCGATCTGATTTTATGATAATGGAG +
Preference number: 2 (lower is better)
Translates to: RKQGLLGQNVTALKV*FGAHKYRSDFMIME
Trigger: CTCCATTATCATAAAATCAGATCGATATTTATGTGCCCCAAACAAAACTTTAAGAGCAGTTACATTCTGTCCCAGTAGCCCTTGTTTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373344.11
3UTR CAA 90 bp CATCACTCTGACATCTACCATGGTAGAATCTGCACACTGACCATTTaGAATTGGATTTATAAATCTATTCCTGAACTCCTTAATGGATCC +
Preference number: 2 (lower is better)
Translates to: HHSDIYHGRICTLTI*NWIYKSIPELLNGS
Trigger: GGATCCATTAAGGAGTTCAGGAATAGATTTATAAATCCAATTCAAAATGGTCAGTGTGCAGATTCTACCATGGTAGATGTCAGAGTGATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR-3UTR TCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAATCTAGGCAACATCACTaGCAAATGTCAGGAAGAAAT +
Preference number: 2 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKSRQHH*QMSGRN
Trigger: ATTTCTTCCTGACATTTGTCAGTGATGTTGCCTAGA...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
3UTR-3UTR TCA 90 bp AGCTGCTTTTCTTTCTTCTTCAGTCAACTCTTCTTCTTCTTTGTGGTCCAAAAGCACAAAAGAACTGTATaGAGAAAACTTACCACCTGT +
Preference number: 2 (lower is better)
Translates to: SCFSFFFSQLFFFFVVQKHKRTV*RKLTTC
Trigger: ACAGGTGGTAAGTTTTCTTCATACAGTTCTTTTGTG...CTTTTGGACCACAAAGAAGAAGAAGAGTTGACTGAAGAAGAAAGAAAAGCAGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR-3UTR CCA 90 bp AGCTGCTTTTCTTTCTTCTTCAGTCAACTCTTCTTCTTCTTTGTGGTCCAAAAGACTAATATGGAAGATTaGCATTTAAGGGGACCAAAC +
Preference number: 2 (lower is better)
Translates to: SCFSFFFSQLFFFFVVQKTNMED*HLRGPN
Trigger: GTTTGGTCCCCTTAAATGCCAATCTTCCATATTAGT...CTTTTGGACCACAAAGAAGAAGAAGAGTTGACTGAAGAAGAAAGAAAAGCAGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR-3UTR CCA 90 bp AGCTGCTTTTCTTTCTTCTTCAGTCAACTCTTCTTCTTCTTTGTGGTCCAAAAGTCATCTCCTGAAGATTaGCAAAATCCAGTATGTGAA +
Preference number: 2 (lower is better)
Translates to: SCFSFFFSQLFFFFVVQKSSPED*QNPVCE
Trigger: TTCACATACTGGATTTTGCCAATCTTCAGGAGATGA...CTTTTGGACCACAAAGAAGAAGAAGAGTTGACTGAAGAAGAAAGAAAAGCAGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR CAA 90 bp GTTTCTTCATCTTCATCTAAAACCAACTTGGTTGTTATTGGACACTaGGTGGGTGAAGCATCTTCAATTTCTATCACCTCTCTCAATTTT +
Preference number: 2 (lower is better)
Translates to: VSSSSSKTNLVVIGH*VGEASSISITSLNF
Trigger: AAAATTGAGAGAGGTGATAGAAATTGAAGATGCTTCACCCACCAAGTGTCCAATAACAACCAAGTTGGTTTTAGATGAAGATGAAGAAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR CAA 90 bp TCATTCTCACAGCTAACACATATTCGTGTTTTGGAGGCAAGAATTTaGTTAATGCTGTATAATCTTTCCTCTGAACACATCCAGCTAACA +
Preference number: 2 (lower is better)
Translates to: SFSQLTHIRVLEARI*LMLYNLSSEHIQLT
Trigger: TGTTAGCTGGATGTGTTCAGAGGAAAGATTATACAGCATTAACAAAATTCTTGCCTCCAAAACACGAATATGTGTTAGCTGTGAGAATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR-3UTR CCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAAACTAATATGGAAGATTaGCATTTAAGGGGACCAAAC +
Preference number: 2 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKTNMED*HLRGPN
Trigger: GTTTGGTCCCCTTAAATGCCAATCTTCCATATTAGT...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
3UTR CAA 90 bp AAAATAACGGTAGAAAAATGTTTATTCTCTAAGGGTAGATCTGATTaGGAGATAGCCAAGTCACTTGAGACTGAGTCTGGTGAAATAAAG +
Preference number: 2 (lower is better)
Translates to: KITVEKCLFSKGRSD*EIAKSLETESGEIK
Trigger: CTTTATTTCACCAGACTCAGTCTCAAGTGACTTGGCTATCTCCAAATCAGATCTACCCTTAGAGAATAAACATTTTTCTACCGTTATTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373344.11
3UTR-3UTR CCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACACTAATATGGAAGATTaGCATTTAAGGGGACCAAAC +
Preference number: 2 (lower is better)
Translates to: KQFEISSVLSVCKKILGNTNMED*HLRGPN
Trigger: GTTTGGTCCCCTTAAATGCCAATCTTCCATATTAGT...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
3UTR GCA 72 bp ATCACATTGATTTCCCTTGGGAAGGTCCTGGATTTTTaGTTCTCATTGGGGGTGGTGCACGCTGTAATGGTG +
Preference number: 3 (lower is better)
Translates to: ITLISLGKVLDF*FSLGVVHAVMV
Trigger: CACCATTACAGCGTGCACCACCCCCAATGAGAAGCAAAAATCCAGGACCTTCCCAAGGGAAATCAATGTGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR-3UTR CAA 90 bp CTTCTCTGCTTCATACTCAGCCCAAGCTGCTTTTCTTTCTTCTTCAGTCAACTCCCAACTCTGCTTTCTTaGCAGACCTTGTTCTGGGCC +
Preference number: 3 (lower is better)
Translates to: LLCFILSPSCFSFFFSQLPTLLS*QTLFWA
Trigger: GGCCCAGAACAAGGTCTGCAAAGAAAGCAGAGTTGG...GAGTTGACTGAAGAAGAAAGAAAAGCAGCTTGGGCTGAGTATGAAGCAGAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR GCA 72 bp ATTTGGGGGCTTTGGCATCATGAGGTGACCCAGTGTTaGTTGTTGATAAGTCATTTGTTGCTGTTGCTGCTG +
Preference number: 3 (lower is better)
Translates to: IWGLWHHEVTQC*LLISHLLLLLL
Trigger: CAGCAGCAACAGCAACAAATGACTTATCAACAAGCAACACTGGGTCACCTCATGATGCCAAAGCCCCCAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR TCA 72 bp ACCTGTTGTCCACAAGCAGTGCAGCTCACAATCCCATaGAGCCCATCTTTAAGTATCTTCTATGTGCTTTGG +
Preference number: 3 (lower is better)
Translates to: TCCPQAVQLTIP*SPSLSIFYVLW
Trigger: CCAAAGCACATAGAAGATACTTAAAGATGGGCTTCATGGGATTGTGAGCTGCACTGCTTGTGGACAACAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR TCA 72 bp TTCAGTTCCACTGCTGCCATCCCCTTGATGATCAACTaGACTCTGAACTTCCATAGCAGTCTCAAGATTCTC +
Preference number: 3 (lower is better)
Translates to: FSSTAAIPLMIN*TLNFHSSLKIL
Trigger: GAGAATCTTGAGACTGCTATGGAAGTTCAGAGTTCAGTTGATCATCAAGGGGATGGCAGCAGTGGAACTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR CCA 72 bp CTTACCACCTGTAAAGTCTTACCAAGGCCCATACAGTaGGCAAGAATGCATCCTGAACCTGGAGATTTCTTT +
Preference number: 3 (lower is better)
Translates to: LTTCKVLPRPIQ*ARMHPEPGDFF
Trigger: AAAGAAATCTCCAGGTTCAGGATGCATTCTTGCCCACTGTATGGGCCTTGGTAAGACTTTACAGGTGGTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480283.5
ENST00000623242.3
3UTR CCA 72 bp AATCTGCTGGTAGTTAGAAGGATTCATGATCAAATTTaGGGGCTTTGGCATCATGAGGTGACCCAGTGTTGC +
Preference number: 3 (lower is better)
Translates to: NLLVVRRIHDQI*GLWHHEVTQCC
Trigger: GCAACACTGGGTCACCTCATGATGCCAAAGCCCCCAAATTTGATCATGAATCCTTCTAACTACCAGCAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR-3UTR CAA 90 bp ATGAACATAGCTAAGGGAAGGCTACAAAATATTCAGCTCATTTGGAGGCCAGGTTCTATCAAGTGTGGGTaGGTAGCCCTGCTTGACTTA +
Preference number: 3 (lower is better)
Translates to: MNIAKGRLQNIQLIWRPGSIKCG*VALLDL
Trigger: TAAGTCAAGCAGGGCTACCAACCCACACTTGATAGA...ACCTGGCCTCCAAATGAGCTGAATATTTTGTAGCCTTCCCTTAGCTATGTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373344.11
3UTR GCA 72 bp AGCTTATCGACACCATCAGTGGAAGCACTTGCTTGCTaGTTCTTAGGAAGTCGATCTCTTAATTCCATGATG +
Preference number: 3 (lower is better)
Translates to: SLSTPSVEALAC*FLGSRSLNSMM
Trigger: CATCATGGAATTAAGAGATCGACTTCCTAAGAAGCAGCAAGCAAGTGCTTCCACTGATGGTGTCGATAAGCT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR GCA 72 bp TCTTCTCCAGATTCTCCGTCACTCACAGTCAATTTGTaGCGCAAAAGCCTATGTCTGTATCTTGGCTTCTTA +
Preference number: 3 (lower is better)
Translates to: SSPDSPSLTVNL*RKSLCLYLGFL
Trigger: TAAGAAGCCAAGATACAGACATAGGCTTTTGCGGCACAAATTGACTGTGAGTGACGGAGAATCTGGAGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR CCA 72 bp GCTGTTACATGCAGTGACCAAGTCCAACAAAGGCTCTaGGTGACAAATGTAGCAATACCATTGGTTGTTTTC +
Preference number: 3 (lower is better)
Translates to: AVTCSDQVQQRL*VTNVAIPLVVF
Trigger: GAAAACAACCAATGGTATTGCTACATTTGTCACCCAGAGCCTTTGTTGGACTTGGTCACTGCATGTAACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR CCA 72 bp AGCATCAGCATCTGTAACAAAATCTTTGTACCAGTCTaGAGCTGGGCTGCTTGGATTAGAAGAAGAAGTAGC +
Preference number: 3 (lower is better)
Translates to: SISICNKIFVPV*SWAAWIRRRSS
Trigger: GCTACTTCTTCTTCTAATCCAAGCAGCCCAGCTCCAGACTGGTACAAAGATTTTGTTACAGATGCTGATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR TCA 72 bp TTCATCCACATTTCCTTCACCACCTCCCCGAGATCTTaGATTCCAGACCTTAATCACTTCAACATCATTGTC +
Preference number: 3 (lower is better)
Translates to: FIHISFTTSPRS*IPDLNHFNIIV
Trigger: GACAATGATGTTGAAGTGATTAAGGTCTGGAATTCAAGATCTCGGGGAGGTGGTGAAGGAAATGTGGATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR TCA 72 bp CTCCACCTGCTGCTGATCAACAACTCGAAAAGACAGTaGCTGCTTAGTTACTTGCCGATCATAAATCTTATC +
Preference number: 3 (lower is better)
Translates to: LHLLLINNSKRQ*LLSYLPIINLI
Trigger: GATAAGATTTATGATCGGCAAGTAACTAAGCAGTCACTGTCTTTTCGAGTTGTTGATCAGCAGCAGGTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR TCA 72 bp TTCCGCACACCACCTACATTGTTCATCCATTCCATCTaGGTCACGGCTAATATCATCACTCATGTAATACTT +
Preference number: 3 (lower is better)
Translates to: FRTPPTLFIHSI*VTANIITHVIL
Trigger: AAGTATTACATGAGTGATGATATTAGCCGTGACTCAGATGGAATGGATGAACAATGTAGGTGGTGTGCGGAA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR TCA 72 bp ACTGTTCTAAATTCTCAAATACGCTGTTACATGCAGTaGCCAAGTCCAACAAAGGCTCTGGGTGACAAATGT +
Preference number: 3 (lower is better)
Translates to: TVLNSQIRCYMQ*PSPTKALGDKC
Trigger: ACATTTGTCACCCAGAGCCTTTGTTGGACTTGGTCACTGCATGTAACAGCGTATTTGAGAATTTAGAACAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR TCA 72 bp TCCTTCCATACAGCTGAAATTATATCCTCAAGAGGTTaGATCCTCACTGCTGTCACACTGTTTGTTGCTTCT +
Preference number: 3 (lower is better)
Translates to: SFHTAEIISSRG*ILTAVTLFVAS
Trigger: AGAAGCAACAAACAGTGTGACAGCAGTGAGGATTCAACCTCTTGAGGATATAATTTCAGCTGTATGGAAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR CCA 72 bp TGTAGCAATACCATTGGTTGTTTTCATCCATTATTGTaGACAACTCCTTTCGACCAAGGTTGCGTAGAATGC +
Preference number: 3 (lower is better)
Translates to: CSNTIGCFHPLL*TTPFDQGCVEC
Trigger: GCATTCTACGCAACCTTGGTCGAAAGGAGTTGTCCACAATAATGGATGAAAACAACCAATGGTATTGCTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR-3UTR CAA 90 bp AGCTGCTTTTCTTTCTTCTTCAGTCAACTCTTCTTCTTCTTTGTGGTCCAAAAGGGATGTAATGTCAGCTaGCTTCCTTTTAGTGCTTGT +
Preference number: 3 (lower is better)
Translates to: SCFSFFFSQLFFFFVVQKGCNVS*LPFSAC
Trigger: ACAAGCACTAAAAGGAAGCAAGCTGACATTACATCC...CTTTTGGACCACAAAGAAGAAGAAGAGTTGACTGAAGAAGAAAGAAAAGCAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR-3UTR CAA 90 bp AGCTGCTTTTCTTTCTTCTTCAGTCAACTCTTCTTCTTCTTTGTGGTCCAAAAGTTCTTAATCATCTCTTaGGGCACAATTAGTGCGGAA +
Preference number: 3 (lower is better)
Translates to: SCFSFFFSQLFFFFVVQKFLIIS*GTISAE
Trigger: TTCCGCACTAATTGTGCCCAAAGAGATGATTAAGAA...CTTTTGGACCACAAAGAAGAAGAAGAGTTGACTGAAGAAGAAAGAAAAGCAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR-3UTR CAA 90 bp AGCTGCTTTTCTTTCTTCTTCAGTCAACTCTTCTTCTTCTTTGTGGTCCAAAAGCACCGGTACTTTTATTaGTTCTTTGTTCCTCTGTTG +
Preference number: 3 (lower is better)
Translates to: SCFSFFFSQLFFFFVVQKHRYFY*FFVPLL
Trigger: CAACAGAGGAACAAAGAACAAATAAAAGTACCGGTG...CTTTTGGACCACAAAGAAGAAGAAGAGTTGACTGAAGAAGAAAGAAAAGCAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR GCA 72 bp TATGCCCATTATTCCAAAATTCCATGCACTATACCATaGTGTCTTCTTGTTGAAGATTATGAGCATGGGGTA +
Preference number: 3 (lower is better)
Translates to: YAHYSKIPCTIP*CLLVEDYEHGV
Trigger: TACCCCATGCTCATAATCTTCAACAAGAAGACAGCATGGTATAGTGCATGGAATTTTGGAATAATGGGCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493470.2
3UTR GCA 72 bp TCTATATCAGAAGAAGATGAGGATGTAATGTCAGCTTaGTTCCTTTTAGTGCTTGTTCTTAGGGAGTTTCTC +
Preference number: 3 (lower is better)
Translates to: SISEEDEDVMSA*FLLVLVLREFL
Trigger: GAGAAACTCCCTAAGAACAAGCACTAAAAGGAAGCAAGCTGACATTACATCCTCATCTTCTTCTGATATAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR GCA 72 bp AAGAGGTTGAATCCTCACTGCTGTCACACTGTTTGTTaGTTCTACAACTTTTTCTCTTCCTTGATTAATGAG +
Preference number: 3 (lower is better)
Translates to: KRLNPHCCHTVC*FYNFFSSLINE
Trigger: CTCATTAATCAAGGAAGAGAAAAAGTTGTAGAAGCAACAAACAGTGTGACAGCAGTGAGGATTCAACCTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR-3UTR CAA 90 bp AGCTGCTTTTCTTTCTTCTTCAGTCAACTCTTCTTCTTCTTTGTGGTCCAAAAGAAACTAGGTAATTCTTaGGAGATTTTCTCCCACATG +
Preference number: 3 (lower is better)
Translates to: SCFSFFFSQLFFFFVVQKKLGNS*EIFSHM
Trigger: CATGTGGGAGAAAATCTCCAAAGAATTACCTAGTTT...CTTTTGGACCACAAAGAAGAAGAAGAGTTGACTGAAGAAGAAAGAAAAGCAGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR-3UTR CAA 90 bp AGCTGCTTTTCTTTCTTCTTCAGTCAACTCTTCTTCTTCTTTGTGGTCCAAAAGTCATCTAAAACCAACTaGGTTGTTATTGGACACTTG +
Preference number: 3 (lower is better)
Translates to: SCFSFFFSQLFFFFVVQKSSKTN*VVIGHL
Trigger: CAAGTGTCCAATAACAACCAAGTTGGTTTTAGATGA...CTTTTGGACCACAAAGAAGAAGAAGAGTTGACTGAAGAAGAAAGAAAAGCAGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR TCA 72 bp CGAAACTCGGAATTTAAGTCTTCTTCCAATGCAAGATaGGCCTTCTTAATATCAGCCAACACAGACTTAAAA +
Preference number: 3 (lower is better)
Translates to: RNSEFKSSSNAR*AFLISANTDLK
Trigger: TTTTAAGTCTGTGTTGGCTGATATTAAGAAGGCTCATCTTGCATTGGAAGAAGACTTAAATTCCGAGTTTCG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR TCA 72 bp CTCTTCTTCCTCAGAATTACTCTTGTTTTCACTGGATaGATCTTCTTGAACCTTAATACGTCGCCTTTTCTT +
Preference number: 3 (lower is better)
Translates to: LFFLRITLVFTG*IFLNLNTSPFL
Trigger: AAGAAAAGGCGACGTATTAAGGTTCAAGAAGATTCATCCAGTGAAAACAAGAGTAATTCTGAGGAAGAAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR-3UTR CAA 90 bp TTTTATTATCTTCAGAACTTTCCTCAGCATCAGATGATGATGAGCCACTTTGTAAGACTCAGACTGGGTTaGTCGTTTCTTTTTAGAAAT +
Preference number: 3 (lower is better)
Translates to: FYYLQNFPQHQMMMSHFVRLRLG*SFLFRN
Trigger: ATTTCTAAAAAGAAACGACAAACCCAGTCTGAGTCT...TACAAAGTGGCTCATCATCATCTGATGCTGAGGAAAGTTCTGAAGATAATAAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR TCA 72 bp AGAATTCTGATCATCATCTTCTATATCAGAAGAAGATaGGGATGTAATGTCAGCTTGCTTCCTTTTAGTGCT +
Preference number: 3 (lower is better)
Translates to: RILIIIFYIRRR*GCNVSLLPFSA
Trigger: AGCACTAAAAGGAAGCAAGCTGACATTACATCCTCATCTTCTTCTGATATAGAAGATGATGATCAGAATTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR GCA 72 bp ATCAGATACCCTTATGCCCATTATTCCAAAATTCCATaGACTATACCATGCTGTCTTCTTGTTGAAGATTAT +
Preference number: 3 (lower is better)
Translates to: IRYPYAHYSKIP*TIPCCLLVEDY
Trigger: ATAATCTTCAACAAGAAGACAGCATGGTATAGTGCATGGAATTTTGGAATAATGGGCATAAGGGTATCTGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493470.2
3UTR GCA 72 bp AATGACAAATTTCTTCTCGCTCAGGTAACTTTTCAGTaGCATCAGATGAAGATTCATACTGTTGTTCCATTT +
Preference number: 3 (lower is better)
Translates to: NDKFLLAQVTFQ*HQMKIHTVVPF
Trigger: AAATGGAACAACAGTATGAATCTTCATCTGATGGCACTGAAAAGTTACCTGAGCGAGAAGAAATTTGTCATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR CCA 72 bp GCGATAAACTCTGAATATACTCTGGATGTCATAAGATaGATTCCAAGAAGCGTCGAATATAATTACTCGATT +
Preference number: 3 (lower is better)
Translates to: AINSEYTLDVIR*IPRSVEYNYSI
Trigger: AATCGAGTAATTATATTCGACGCTTCTTGGAATCCATCTTATGACATCCAGAGTATATTCAGAGTTTATCGC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR GCA 90 bp TCTAAAACCTCAGCATCAGCATCTGTAACAAAATCTTTGTACCAGTCTGGAGCTTGCTGGGCGCCGATCTaGGCTCCCCCGCGCCCGGTT +
Preference number: 4 (lower is better)
Translates to: SKTSASASVTKSLYQSGACWAPI*APPRPV
Trigger: AACCGGGCGCGGGGGAGCGCAGATCGGCGCCCAGCA...AGCTCCAGACTGGTACAAAGATTTTGTTACAGATGCTGATGCTGAGGTTTTAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR CAA 72 bp ATTTCCCTTGGGAAGGTCCTGGATTTTTGCTTCTCATaGGGGGTGGTGCACGCTGTAATGGTGGTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: ISLGKVLDFCFS*GVVHAVMVVAA
Trigger: TGCAGCCACCACCATTACAGCGTGCACCACCCCCAATGAGAAGCAAAAATCCAGGACCTTCCCAAGGGAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR TCA 90 bp ACCTGTAAAGTCTTACCAAGGCCCATACAGTGGGCAAGAATGCATCCTGAACCTGGTAGGAGGATCACTTaGGCCCAAGAGTTCGAGGCC +
Preference number: 4 (lower is better)
Translates to: TCKVLPRPIQWARMHPEPGRRIT*AQEFEA
Trigger: GGCCTCGAACTCTTGGGCTCAAGTGATCCTCCTACC...AGGTTCAGGATGCATTCTTGCCCACTGTATGGGCCTTGGTAAGACTTTACAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623242.3
CDS-3UTR GCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAATGCTGGGCGCCGATCTaGGCTCCCCCGCGCCCGGTT +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKCWAPI*APPRPV
Trigger: AACCGGGCGCGGGGGAGCGCAGATCGGCGCCCAGCA...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR GCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACTGCTGGGCGCCGATCTaGGCTCCCCCGCGCCCGGTT +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNCWAPI*APPRPV
Trigger: AACCGGGCGCGGGGGAGCGCAGATCGGCGCCCAGCA...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR TCA 90 bp TCTTCAATCAAGTCCAGAGATATGAGGGACTGGCTGAAAACAAGGACTTTATCCCCTTGTCGGCTTCTGTaGTTGCTGGGCGCCGATCTG +
Preference number: 4 (lower is better)
Translates to: SSIKSRDMRDWLKTRTLSPCRLL*LLGADL
Trigger: CAGATCGGCGCCCAGCAATCACAGAAGCCGACAAGG...GGATAAAGTCCTTGTTTTCAGCCAGTCCCTCATATCTCTGGACTTGATTGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR GCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAAAAAGGCCGCTACCACTaGCACCGCCGCAGGAGCCGC +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKKGRYH*HRRRSR
Trigger: GCGGCTCCTGCGGCGGTGGCAGTGGTAGCGGCCTTT...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR GCA 90 bp ATGAACATAGCTAAGGGAAGGCTACAAAATATTCAGCTCATTTGGAGGCCAGGTACAAAGCGACACCGCTaGCGCCGCCATTTTGTTGGG +
Preference number: 4 (lower is better)
Translates to: MNIAKGRLQNIQLIWRPGTKRHR*RRHFVG
Trigger: CCCAACAAAATGGCGGCGGCAGCGGTGTCGCTTTGT...ACCTGGCCTCCAAATGAGCTGAATATTTTGTAGCCTTCCCTTAGCTATGTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373344.11
CDS-3UTR GCA 90 bp AAAGCAGTATTAAGAGGACAAACCACTAACGCCGTGCTGAAATCCAGTTTGTCAACAAAGCGACACCGCTaGCGCCGCCATTTTGTTGGG +
Preference number: 4 (lower is better)
Translates to: KAVLRGQTTNAVLKSSLSTKRHR*RRHFVG
Trigger: CCCAACAAAATGGCGGCGGCAGCGGTGTCGCTTTGT...TGACAAACTGGATTTCAGCACGGCGTTAGTGGTTTGTCCTCTTAATACTGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR GCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACAAAGGCCGCTACCACTaGCACCGCCGCAGGAGCCGC +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNKGRYH*HRRRSR
Trigger: GCGGCTCCTGCGGCGGTGGCAGTGGTAGCGGCCTTT...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR GCA 90 bp TCTAAAACCTCAGCATCAGCATCTGTAACAAAATCTTTGTACCAGTCTGGAGCTGTCGGCTTCTGTGATTaGTGGGCGCCGATCTGCGCT +
Preference number: 4 (lower is better)
Translates to: SKTSASASVTKSLYQSGAVGFCD*WAPICA
Trigger: AGCGCAGATCGGCGCCCAGCAATCACAGAAGCCGAC...AGCTCCAGACTGGTACAAAGATTTTGTTACAGATGCTGATGCTGAGGTTTTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR CCA 90 bp ATGAACATAGCTAAGGGAAGGCTACAAAATATTCAGCTCATTTGGAGGCCAGGTTGGGGGAGAGGGGCGTaGATCCACCAAACCTCACAA +
Preference number: 4 (lower is better)
Translates to: MNIAKGRLQNIQLIWRPGWGRGA*IHQTSQ
Trigger: TTGTGAGGTTTGGTGGATCCACGCCCCTCTCCCCCA...ACCTGGCCTCCAAATGAGCTGAATATTTTGTAGCCTTCCCTTAGCTATGTTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373344.11
CDS-3UTR TCA 90 bp ATGAACATAGCTAAGGGAAGGCTACAAAATATTCAGCTCATTTGGAGGCCAGGTGGGGCTTTGGCATCATaGGGTGACCCAGTGTTGCTT +
Preference number: 4 (lower is better)
Translates to: MNIAKGRLQNIQLIWRPGGALAS*GDPVLL
Trigger: AAGCAACACTGGGTCACCTCATGATGCCAAAGCCCC...ACCTGGCCTCCAAATGAGCTGAATATTTTGTAGCCTTCCCTTAGCTATGTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373344.11
CDS-3UTR TCA 90 bp ATGAACATAGCTAAGGGAAGGCTACAAAATATTCAGCTCATTTGGAGGCCAGGTCTGCCAGCAACAGGATaGAGCATTAGCACTGGCACC +
Preference number: 4 (lower is better)
Translates to: MNIAKGRLQNIQLIWRPGLPATG*SISTGT
Trigger: GGTGCCAGTGCTAATGCTTCATCCTGTTGCTGGCAG...ACCTGGCCTCCAAATGAGCTGAATATTTTGTAGCCTTCCCTTAGCTATGTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373344.11
CDS-3UTR GCA 90 bp ATGAACATAGCTAAGGGAAGGCTACAAAATATTCAGCTCATTTGGAGGCCAGGTAGTCGTCACTGTAGCTaGTGCTGGAACCTCCCCACA +
Preference number: 4 (lower is better)
Translates to: MNIAKGRLQNIQLIWRPGSRHCS*CWNLPT
Trigger: TGTGGGGAGGTTCCAGCAGCAGCTACAGTGACGACT...ACCTGGCCTCCAAATGAGCTGAATATTTTGTAGCCTTCCCTTAGCTATGTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373344.11
CDS-3UTR GCA 90 bp ATGAACATAGCTAAGGGAAGGCTACAAAATATTCAGCTCATTTGGAGGCCAGGTTGTAATGGTGGTGGCTaGATACCACCAGCCACTGGC +
Preference number: 4 (lower is better)
Translates to: MNIAKGRLQNIQLIWRPGCNGGG*IPPATG
Trigger: GCCAGTGGCTGGTGGTATGCAGCCACCACCATTACA...ACCTGGCCTCCAAATGAGCTGAATATTTTGTAGCCTTCCCTTAGCTATGTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373344.11
CDS-3UTR CCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAAGGCTTCTGTGATTGCTaGGCGCCGATCTGCGCTCCC +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKGFCDC*APICAP
Trigger: GGGAGCGCAGATCGGCGCCCAGCAATCACAGAAGCC...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR CCA 90 bp AAGTCTTACCAAGGCCCATACAGTGGGCAAGAATGCATCCTGAACCTGGAGATTGTCTTCATTCAGCACTaGCTCTGGCTGTACAATCAC +
Preference number: 4 (lower is better)
Translates to: KSYQGPYSGQECILNLEIVFIQH*LWLYNH
Trigger: GTGATTGTACAGCCAGAGCCAGTGCTGAATGAAGAC...AATCTCCAGGTTCAGGATGCATTCTTGCCCACTGTATGGGCCTTGGTAAGACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR CCA 90 bp TCTAAAACCTCAGCATCAGCATCTGTAACAAAATCTTTGTACCAGTCTGGAGCTTGGGGGAGAGGGGCGTaGATCCACCAAACCTCACAA +
Preference number: 4 (lower is better)
Translates to: SKTSASASVTKSLYQSGAWGRGA*IHQTSQ
Trigger: TTGTGAGGTTTGGTGGATCCACGCCCCTCTCCCCCA...AGCTCCAGACTGGTACAAAGATTTTGTTACAGATGCTGATGCTGAGGTTTTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR TCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAACCTTGTCGGCTTCTGTaGTTGCTGGGCGCCGATCTG +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKPCRLL*LLGADL
Trigger: CAGATCGGCGCCCAGCAATCACAGAAGCCGACAAGG...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR TCA 90 bp GTTCCTCTGTTGGAACATTCTGATGCATGTGCTCACTATCTACCTGTTTTCTTGAGCCCACTTCTTCCTTaGCTGTGCAGTAGTGGAACC +
Preference number: 4 (lower is better)
Translates to: VPLLEHSDACAHYLPVFLSPLLP*LCSSGT
Trigger: GGTTCCACTACTGCACAGTCAAGGAAGAAGTGGGCT...CAAGAAAACAGGTAGATAGTGAGCACATGCATCAGAATGTTCCAACAGAGGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR TCA 90 bp ATGAACATAGCTAAGGGAAGGCTACAAAATATTCAGCTCATTTGGAGGCCAGGTCGCTCCACCTGCTGCTaGTCAACAACTCGAAAAGAC +
Preference number: 4 (lower is better)
Translates to: MNIAKGRLQNIQLIWRPGRSTCC*STTRKD
Trigger: GTCTTTTCGAGTTGTTGATCAGCAGCAGGTGGAGCG...ACCTGGCCTCCAAATGAGCTGAATATTTTGTAGCCTTCCCTTAGCTATGTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373344.11
CDS-3UTR GCA 90 bp AAGTCTTACCAAGGCCCATACAGTGGGCAAGAATGCATCCTGAACCTGGAGATTTACAGTGGGCAAGAATaGATCCTGAACCTGGAGATT +
Preference number: 4 (lower is better)
Translates to: KSYQGPYSGQECILNLEIYSGQE*ILNLEI
Trigger: AATCTCCAGGTTCAGGATGCATTCTTGCCCACTGTA...AATCTCCAGGTTCAGGATGCATTCTTGCCCACTGTATGGGCCTTGGTAAGACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480283.5
ENST00000623242.3
CDS-3UTR GCA 90 bp CATGCACTATACCATGCTGTCTTCTTGTTGAAGATTATGAGCATGGGGTATGCTCGTTGCTGCTGTTTGTaGCCATGCCTAGGGTGTGTT +
Preference number: 4 (lower is better)
Translates to: HALYHAVFLLKIMSMGYARCCCL*PCLGCV
Trigger: AACACACCCTAGGCATGGGCACAAACAGCAGCAACG...AGCATACCCCATGCTCATAATCTTCAACAAGAAGACAGCATGGTATAGTGCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493470.2
CDS-3UTR CCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACGGCTTCTGTGATTGCTaGGCGCCGATCTGCGCTCCC +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNGFCDC*APICAP
Trigger: GGGAGCGCAGATCGGCGCCCAGCAATCACAGAAGCC...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR CCA 90 bp CAGTGTTGCTTGTTGATAAGTCATTTGTTGCTGTTGCTGCTGATTGTACTGCTGTTGCAGACCTTGTTCTaGGCCGCTGTTCATCTTCGG +
Preference number: 4 (lower is better)
Translates to: QCCLLISHLLLLLLIVLLLQTLF*AAVHLR
Trigger: CCGAAGATGAACAGCGGCCCAGAACAAGGTCTGCAA...CAGCAGTACAATCAGCAGCAACAGCAACAAATGACTTATCAACAAGCAACACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR CCA 90 bp TGGAACCATCTAAACGGTAATAGTCAATGTTTCGAAGCCACTTCCCCTCACCTTCAAATTTGGGGGCTTTaGCATCATGAGGTGACCCAG +
Preference number: 4 (lower is better)
Translates to: WNHLNGNSQCFEATSPHLQIWGL*HHEVTQ
Trigger: CTGGGTCACCTCATGATGCCAAAGCCCCCAAATTTG...AAGGTGAGGGGAAGTGGCTTCGAAACATTGACTATTACCGTTTAGATGGTTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR CAA 72 bp TGGGGGCTTTGGCATCATGAGGTGACCCAGTGTTGCTaGTTGATAAGTCATTTGTTGCTGTTGCTGCTGATT +
Preference number: 4 (lower is better)
Translates to: WGLWHHEVTQCC*LISHLLLLLLI
Trigger: AATCAGCAGCAACAGCAACAAATGACTTATCAACAAGCAACACTGGGTCACCTCATGATGCCAAAGCCCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR CAA 72 bp AATCACATTGATTTCCCTTGGGAAGGTCCTGGATTTTaGCTTCTCATTGGGGGTGGTGCACGCTGTAATGGT +
Preference number: 4 (lower is better)
Translates to: NHIDFPWEGPGF*LLIGGGARCNG
Trigger: ACCATTACAGCGTGCACCACCCCCAATGAGAAGCAAAAATCCAGGACCTTCCCAAGGGAAATCAATGTGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR TCA 90 bp ACCTGTAAAGTCTTACCAAGGCCCATACAGTGGGCAAGAATGCATCCTGAACCTTCTTCCAATGCAAGATaGGCCTTCTTAATATCAGCC +
Preference number: 4 (lower is better)
Translates to: TCKVLPRPIQWARMHPEPSSNAR*AFLISA
Trigger: GGCTGATATTAAGAAGGCTCATCTTGCATTGGAAGA...AGGTTCAGGATGCATTCTTGCCCACTGTATGGGCCTTGGTAAGACTTTACAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR TCA 90 bp TGGAACCATCTAAACGGTAATAGTCAATGTTTCGAAGCCACTTCCCCTCACCTTCTGTACTTGGGCCTCTaGGAGATTCATGTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: WNHLNGNSQCFEATSPHLLYLGL*EIHVLL
Trigger: AAGGAGAACATGAATCTCTCAGAGGCCCAAGTACAG...AAGGTGAGGGGAAGTGGCTTCGAAACATTGACTATTACCGTTTAGATGGTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR TCA 90 bp AAATCTTCAATCAAGTCCAGAGATATGAGGGACTGGCTGAAAACAAGGACTTTAGGGGCTTTGGCATCATaGGGTGACCCAGTGTTGCTT +
Preference number: 4 (lower is better)
Translates to: KSSIKSRDMRDWLKTRTLGALAS*GDPVLL
Trigger: AAGCAACACTGGGTCACCTCATGATGCCAAAGCCCC...TAAAGTCCTTGTTTTCAGCCAGTCCCTCATATCTCTGGACTTGATTGAAGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR TCA 90 bp ATGAACATAGCTAAGGGAAGGCTACAAAATATTCAGCTCATTTGGAGGCCAGGTCCACCAGCCACTGGCTaGTACATTCCTCTCATATCA +
Preference number: 4 (lower is better)
Translates to: MNIAKGRLQNIQLIWRPGPPATG*YIPLIS
Trigger: TGATATGAGAGGAATGTATCAGCCAGTGGCTGGTGG...ACCTGGCCTCCAAATGAGCTGAATATTTTGTAGCCTTCCCTTAGCTATGTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373344.11
CDS-3UTR TCA 90 bp GACTTTATCCCCAATTTCCTCTGCCATTCGAAGAATTTCAAAGAGAAGTACCATCTGCCAGCAACAGGATaGAGCATTAGCACTGGCACC +
Preference number: 4 (lower is better)
Translates to: DFIPNFLCHSKNFKEKYHLPATG*SISTGT
Trigger: GGTGCCAGTGCTAATGCTTCATCCTGTTGCTGGCAG...ATGGTACTTCTCTTTGAAATTCTTCGAATGGCAGAGGAAATTGGGGATAAAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR GCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAACGTCACTGTAGCTGCTaGTGGAACCTCCCCACAGCT +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKRHCSC*WNLPTA
Trigger: AGCTGTGGGGAGGTTCCAGCAGCAGCTACAGTGACG...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR GCA 90 bp GACTTTATCCCCAATTTCCTCTGCCATTCGAAGAATTTCAAAGAGAAGTACCATAGTCGTCACTGTAGCTaGTGCTGGAACCTCCCCACA +
Preference number: 4 (lower is better)
Translates to: DFIPNFLCHSKNFKEKYHSRHCS*CWNLPT
Trigger: TGTGGGGAGGTTCCAGCAGCAGCTACAGTGACGACT...ATGGTACTTCTCTTTGAAATTCTTCGAATGGCAGAGGAAATTGGGGATAAAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR GCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACGTCGGCTTCTGTGATTaGTGGGCGCCGATCTGCGCT +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNVGFCD*WAPICA
Trigger: AGCGCAGATCGGCGCCCAGCAATCACAGAAGCCGAC...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR GCA 90 bp CTTCTCTGCTTCATACTCAGCCCAAGCTGCTTTTCTTTCTTCTTCAGTCAACTCCTTGTTCAGTTCCACTaGTGCCATCCCCTTGATGAT +
Preference number: 4 (lower is better)
Translates to: LLCFILSPSCFSFFFSQLLVQFH*CHPLDD
Trigger: ATCATCAAGGGGATGGCAGCAGTGGAACTGAACAAG...GAGTTGACTGAAGAAGAAAGAAAAGCAGCTTGGGCTGAGTATGAAGCAGAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR GCA 90 bp ATGAACATAGCTAAGGGAAGGCTACAAAATATTCAGCTCATTTGGAGGCCAGGTCAACTCTGCTTTCTTTaGAGACCTTGTTCTGGGCCG +
Preference number: 4 (lower is better)
Translates to: MNIAKGRLQNIQLIWRPGQLCFL*RPCSGP
Trigger: CGGCCCAGAACAAGGTCTGCAAAGAAAGCAGAGTTG...ACCTGGCCTCCAAATGAGCTGAATATTTTGTAGCCTTCCCTTAGCTATGTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373344.11
CDS-3UTR GCA 90 bp ATGAACATAGCTAAGGGAAGGCTACAAAATATTCAGCTCATTTGGAGGCCAGGTCAGTCCCTTCTTCTCTaGTTCATACTCAGCCCAAGC +
Preference number: 4 (lower is better)
Translates to: MNIAKGRLQNIQLIWRPGQSLLL*FILSPS
Trigger: GCTTGGGCTGAGTATGAAGCAGAGAAGAAGGGACTG...ACCTGGCCTCCAAATGAGCTGAATATTTTGTAGCCTTCCCTTAGCTATGTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373344.11
CDS-3UTR GCA 90 bp CATGCACTATACCATGCTGTCTTCTTGTTGAAGATTATGAGCATGGGGTATGCTTTGCTGTTCCGTTGCTaGTGTTTGTGCCCATGCCTA +
Preference number: 4 (lower is better)
Translates to: HALYHAVFLLKIMSMGYALLFRC*CLCPCL
Trigger: TAGGCATGGGCACAAACAGCAGCAACGGAACAGCAA...AGCATACCCCATGCTCATAATCTTCAACAAGAAGACAGCATGGTATAGTGCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493470.2
CDS-3UTR CCA 90 bp ATGAACATAGCTAAGGGAAGGCTACAAAATATTCAGCTCATTTGGAGGCCAGGTGTACCAGTCTGGAGCTaGGCTGCTTGGATTAGAAGA +
Preference number: 4 (lower is better)
Translates to: MNIAKGRLQNIQLIWRPGVPVWS*AAWIRR
Trigger: TCTTCTAATCCAAGCAGCCCAGCTCCAGACTGGTAC...ACCTGGCCTCCAAATGAGCTGAATATTTTGTAGCCTTCCCTTAGCTATGTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373344.11
CDS-3UTR CCA 90 bp TGGAACCATCTAAACGGTAATAGTCAATGTTTCGAAGCCACTTCCCCTCACCTTATCTTTGTACCAGTCTaGAGCTGGGCTGCTTGGATT +
Preference number: 4 (lower is better)
Translates to: WNHLNGNSQCFEATSPHLIFVPV*SWAAWI
Trigger: AATCCAAGCAGCCCAGCTCCAGACTGGTACAAAGAT...AAGGTGAGGGGAAGTGGCTTCGAAACATTGACTATTACCGTTTAGATGGTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480283.5
ENST00000623316.1
CDS-3UTR CCA 90 bp ATGAACATAGCTAAGGGAAGGCTACAAAATATTCAGCTCATTTGGAGGCCAGGTGGAGCTCTGCAAGTATaGTATCCTTTGGCAGCATGG +
Preference number: 4 (lower is better)
Translates to: MNIAKGRLQNIQLIWRPGGALQV*YPLAAW
Trigger: CCATGCTGCCAAAGGATACCATACTTGCAGAGCTCC...ACCTGGCCTCCAAATGAGCTGAATATTTTGTAGCCTTCCCTTAGCTATGTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373344.11
CDS-3UTR CCA 90 bp ATGAACATAGCTAAGGGAAGGCTACAAAATATTCAGCTCATTTGGAGGCCAGGTCAAATTTGGGGGCTTTaGCATCATGAGGTGACCCAG +
Preference number: 4 (lower is better)
Translates to: MNIAKGRLQNIQLIWRPGQIWGL*HHEVTQ
Trigger: CTGGGTCACCTCATGATGCCAAAGCCCCCAAATTTG...ACCTGGCCTCCAAATGAGCTGAATATTTTGTAGCCTTCCCTTAGCTATGTTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373344.11
CDS-3UTR CCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAATGGGGGAGAGGGGCGTaGATCCACCAAACCTCACAA +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKWGRGA*IHQTSQ
Trigger: TTGTGAGGTTTGGTGGATCCACGCCCCTCTCCCCCA...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR CCA 90 bp ATGAACATAGCTAAGGGAAGGCTACAAAATATTCAGCTCATTTGGAGGCCAGGTCCAACTGGTAACAGTTaGCCAGAGTGTACTGCCTTC +
Preference number: 4 (lower is better)
Translates to: MNIAKGRLQNIQLIWRPGPTGNS*PECTAF
Trigger: GAAGGCAGTACACTCTGGCCAACTGTTACCAGTTGG...ACCTGGCCTCCAAATGAGCTGAATATTTTGTAGCCTTCCCTTAGCTATGTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373344.11
CDS-3UTR TCA 90 bp TTCATCCAATTCAAAGCAGTATTAAGAGGACAAACCACTAACGCCGTGCTGAAACCACTAACGCCGTGCTaGAATCCAGTTTGTCACACA +
Preference number: 4 (lower is better)
Translates to: FIQFKAVLRGQTTNAVLKPLTPC*NPVCHT
Trigger: TGTGTGACAAACTGGATTTCAGCACGGCGTTAGTGG...TTTCAGCACGGCGTTAGTGGTTTGTCCTCTTAATACTGCTTTGAATTGGATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480283.5
ENST00000623242.3
CDS-3UTR TCA 90 bp AACAAGGACTTTATCCCCAATTTCCTCTGCCATTCGAAGAATTTCAAAGAGAAGAGCCCACTTCTTCCTTaGCTGTGCAGTAGTGGAACC +
Preference number: 4 (lower is better)
Translates to: NKDFIPNFLCHSKNFKEKSPLLP*LCSSGT
Trigger: GGTTCCACTACTGCACAGTCAAGGAAGAAGTGGGCT...CTTCTCTTTGAAATTCTTCGAATGGCAGAGGAAATTGGGGATAAAGTCCTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480283.5
ENST00000623316.1
CDS-3UTR TCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAAGGGGCTTTGGCATCATaGGGTGACCCAGTGTTGCTT +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKGALAS*GDPVLL
Trigger: AAGCAACACTGGGTCACCTCATGATGCCAAAGCCCC...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR TCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAACTGCCAGCAACAGGATaGAGCATTAGCACTGGCACC +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKLPATG*SISTGT
Trigger: GGTGCCAGTGCTAATGCTTCATCCTGTTGCTGGCAG...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR GCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACACAAAGCGACACCGCTaGCGCCGCCATTTTGTTGGG +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNTKRHR*RRHFVG
Trigger: CCCAACAAAATGGCGGCGGCAGCGGTGTCGCTTTGT...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR GCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACCGTCACTGTAGCTGCTaGTGGAACCTCCCCACAGCT +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNRHCSC*WNLPTA
Trigger: AGCTGTGGGGAGGTTCCAGCAGCAGCTACAGTGACG...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR GCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAAAGTCGTCACTGTAGCTaGTGCTGGAACCTCCCCACA +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKSRHCS*CWNLPT
Trigger: TGTGGGGAGGTTCCAGCAGCAGCTACAGTGACGACT...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR GCA 90 bp CAATTCAAAGCAGTATTAAGAGGACAAACCACTAACGCCGTGCTGAAATCCAGTGTTGTCCACAAGCAGTaGAGCTCACAATCCCATGAA +
Preference number: 4 (lower is better)
Translates to: QFKAVLRGQTTNAVLKSSVVHKQ*SSQSHE
Trigger: TTCATGGGATTGTGAGCTGCACTGCTTGTGGACAAC...ACTGGATTTCAGCACGGCGTTAGTGGTTTGTCCTCTTAATACTGCTTTGAATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR GCA 90 bp AAGTCTTACCAAGGCCCATACAGTGGGCAAGAATGCATCCTGAACCTGGAGATTTGTCTTTATCAACTGTaGCTTCTGCTGAAGAGAAAG +
Preference number: 4 (lower is better)
Translates to: KSYQGPYSGQECILNLEICLYQL*LLLKRK
Trigger: CTTTCTCTTCAGCAGAAGGCACAGTTGATAAAGACA...AATCTCCAGGTTCAGGATGCATTCTTGCCCACTGTATGGGCCTTGGTAAGACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR GCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAATGTAATGGTGGTGGCTaGATACCACCAGCCACTGGC +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKCNGGG*IPPATG
Trigger: GCCAGTGGCTGGTGGTATGCAGCCACCACCATTACA...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR GCA 90 bp TATTTAATTTTACAGATGAACTCTCCACTTCTTGTTCAGTTCCACTGCTGCCATTGTAATGGTGGTGGCTaGATACCACCAGCCACTGGC +
Preference number: 4 (lower is better)
Translates to: YLILQMNSPLLVQFHCCHCNGGG*IPPATG
Trigger: GCCAGTGGCTGGTGGTATGCAGCCACCACCATTACA...ATGGCAGCAGTGGAACTGAACAAGAAGTGGAGAGTTCATCTGTAAAATTAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR GCA 90 bp ATGAACATAGCTAAGGGAAGGCTACAAAATATTCAGCTCATTTGGAGGCCAGGTAAGGTCCTGGATTTTTaGTTCTCATTGGGGGTGGTG +
Preference number: 4 (lower is better)
Translates to: MNIAKGRLQNIQLIWRPGKVLDF*FSLGVV
Trigger: CACCACCCCCAATGAGAAGCAAAAATCCAGGACCTT...ACCTGGCCTCCAAATGAGCTGAATATTTTGTAGCCTTCCCTTAGCTATGTTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000373344.11
CDS-3UTR GCA 90 bp CAGTGTTGCTTGTTGATAAGTCATTTGTTGCTGTTGCTGCTGATTGTACTGCTGAAGGTCCTGGATTTTTaGTTCTCATTGGGGGTGGTG +
Preference number: 4 (lower is better)
Translates to: QCCLLISHLLLLLLIVLLKVLDF*FSLGVV
Trigger: CACCACCCCCAATGAGAAGCAAAAATCCAGGACCTT...CAGCAGTACAATCAGCAGCAACAGCAACAAATGACTTATCAACAAGCAACACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR GCA 90 bp GAAATCAGATACCCTTATGCCCATTATTCCAAAATTCCATGCACTATACCATGCTGCTTGCTGTTCCGTTaGTGCTGTTTGTGCCCATGC +
Preference number: 4 (lower is better)
Translates to: EIRYPYAHYSKIPCTIPCCLLFR*CCLCPC
Trigger: GCATGGGCACAAACAGCAGCAACGGAACAGCAAGCA...GCATGGTATAGTGCATGGAATTTTGGAATAATGGGCATAAGGGTATCTGATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493470.2
CDS-3UTR CCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAACACTGTAGCTGCTGCTaGAACCTCCCCACAGCTCAA +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKHCSCC*NLPTAQ
Trigger: TTGAGCTGTGGGGAGGTTCCAGCAGCAGCTACAGTG...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR CCA 90 bp AAACAAGGACTTTATCCCCAATTTCCTCTGCCATTCGAAGAATTTCAAAGAGAACACTGTAGCTGCTGCTaGAACCTCCCCACAGCTCAA +
Preference number: 4 (lower is better)
Translates to: KQGLYPQFPLPFEEFQREHCSCC*NLPTAQ
Trigger: TTGAGCTGTGGGGAGGTTCCAGCAGCAGCTACAGTG...TTCTCTTTGAAATTCTTCGAATGGCAGAGGAAATTGGGGATAAAGTCCTTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR CCA 90 bp ATGAACATAGCTAAGGGAAGGCTACAAAATATTCAGCTCATTTGGAGGCCAGGTGTCTTCATTCAGCACTaGCTCTGGCTGTACAATCAC +
Preference number: 4 (lower is better)
Translates to: MNIAKGRLQNIQLIWRPGVFIQH*LWLYNH
Trigger: GTGATTGTACAGCCAGAGCCAGTGCTGAATGAAGAC...ACCTGGCCTCCAAATGAGCTGAATATTTTGTAGCCTTCCCTTAGCTATGTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373344.11
CDS-3UTR CCA 90 bp ACCTGTAAAGTCTTACCAAGGCCCATACAGTGGGCAAGAATGCATCCTGAACCTTTGTTATTGGACACTTaGTGGGTGAAGCATCTTCAA +
Preference number: 4 (lower is better)
Translates to: TCKVLPRPIQWARMHPEPLLLDT*WVKHLQ
Trigger: TTGAAGATGCTTCACCCACCAAGTGTCCAATAACAA...AGGTTCAGGATGCATTCTTGCCCACTGTATGGGCCTTGGTAAGACTTTACAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480283.5
ENST00000623242.3
CDS-3UTR CCA 90 bp AGAAAATCTTCAATCAAGTCCAGAGATATGAGGGACTGGCTGAAAACAAGGACTCCAAGGCCCATACAGTaGGCAAGAATGCATCCTGAA +
Preference number: 4 (lower is better)
Translates to: RKSSIKSRDMRDWLKTRTPRPIQ*ARMHPE
Trigger: TTCAGGATGCATTCTTGCCCACTGTATGGGCCTTGG...AGTCCTTGTTTTCAGCCAGTCCCTCATATCTCTGGACTTGATTGAAGATTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR CCA 90 bp AAGTCTTACCAAGGCCCATACAGTGGGCAAGAATGCATCCTGAACCTGGAGATTAACAAAATCAGGGCCTaGATCAACCAAAGCTTTGTT +
Preference number: 4 (lower is better)
Translates to: KSYQGPYSGQECILNLEINKIRA*INQSFV
Trigger: AACAAAGCTTTGGTTGATCCAGGCCCTGATTTTGTT...AATCTCCAGGTTCAGGATGCATTCTTGCCCACTGTATGGGCCTTGGTAAGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR CCA 90 bp CAATTCAAAGCAGTATTAAGAGGACAAACCACTAACGCCGTGCTGAAATCCAGTATCTTTGTACCAGTCTaGAGCTGGGCTGCTTGGATT +
Preference number: 4 (lower is better)
Translates to: QFKAVLRGQTTNAVLKSSIFVPV*SWAAWI
Trigger: AATCCAAGCAGCCCAGCTCCAGACTGGTACAAAGAT...ACTGGATTTCAGCACGGCGTTAGTGGTTTGTCCTCTTAATACTGCTTTGAATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR CCA 90 bp TCTTCAATCAAGTCCAGAGATATGAGGGACTGGCTGAAAACAAGGACTTTATCCCATACCACCAGCCACTaGCTGATACATTCCTCTCAT +
Preference number: 4 (lower is better)
Translates to: SSIKSRDMRDWLKTRTLSHTTSH*LIHSSH
Trigger: ATGAGAGGAATGTATCAGCCAGTGGCTGGTGGTATG...GGATAAAGTCCTTGTTTTCAGCCAGTCCCTCATATCTCTGGACTTGATTGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR CCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACTGGGGGAGAGGGGCGTaGATCCACCAAACCTCACAA +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNWGRGA*IHQTSQ
Trigger: TTGTGAGGTTTGGTGGATCCACGCCCCTCTCCCCCA...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR TCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAAGGTCATGTTTTCGCTTaGACGCCTTGTCGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKGHVFA*TPCRLL
Trigger: CAGAAGCCGACAAGGCGTTCAAGCGAAAACATGACC...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR TCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACCAGCTCACAATCCCATaGAGCCCATCTTCTCCGCGT +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNQLTIP*SPSSPR
Trigger: ACGCGGAGAAGATGGGCTTCATGGGATTGTGAGCTG...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373344.11
CDS-3UTR TCA 90 bp ATGAACATAGCTAAGGGAAGGCTACAAAATATTCAGCTCATTTGGAGGCCAGGTCCCTTGATGATCAACTaGACTCTGAACTTCCATAGC +
Preference number: 4 (lower is better)
Translates to: MNIAKGRLQNIQLIWRPGPLMIN*TLNFHS
Trigger: GCTATGGAAGTTCAGAGTTCAGTTGATCATCAAGGG...ACCTGGCCTCCAAATGAGCTGAATATTTTGTAGCCTTCCCTTAGCTATGTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373344.11
CDS-3UTR TCA 90 bp TCTAAAACCTCAGCATCAGCATCTGTAACAAAATCTTTGTACCAGTCTGGAGCTTCTGAAGAAGAACTGTaGCTCATCCTGCTCACCTCT +
Preference number: 4 (lower is better)
Translates to: SKTSASASVTKSLYQSGASEEEL*LILLTS
Trigger: AGAGGTGAGCAGGATGAGTCACAGTTCTTCTTCAGA...AGCTCCAGACTGGTACAAAGATTTTGTTACAGATGCTGATGCTGAGGTTTTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR TCA 90 bp ATGAACATAGCTAAGGGAAGGCTACAAAATATTCAGCTCATTTGGAGGCCAGGTGGCAAGAATGCATCCTaGACCTGGAGATTTCTTTGT +
Preference number: 4 (lower is better)
Translates to: MNIAKGRLQNIQLIWRPGGKNAS*TWRFLC
Trigger: ACAAAGAAATCTCCAGGTTCAGGATGCATTCTTGCC...ACCTGGCCTCCAAATGAGCTGAATATTTTGTAGCCTTCCCTTAGCTATGTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373344.11
CDS-3UTR TCA 90 bp ACCTGTAAAGTCTTACCAAGGCCCATACAGTGGGCAAGAATGCATCCTGAACCTCACAAAAGAACTGTATaGAGAAAACTTACCACCTGT +
Preference number: 4 (lower is better)
Translates to: TCKVLPRPIQWARMHPEPHKRTV*RKLTTC
Trigger: ACAGGTGGTAAGTTTTCTTCATACAGTTCTTTTGTG...AGGTTCAGGATGCATTCTTGCCCACTGTATGGGCCTTGGTAAGACTTTACAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480283.5
ENST00000623242.3
CDS-3UTR TCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAAAGCCCACTTCTTCCTTaGCTGTGCAGTAGTGGAACC +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKSPLLP*LCSSGT
Trigger: GGTTCCACTACTGCACAGTCAAGGAAGAAGTGGGCT...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR TCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAACGCTCCACCTGCTGCTaGTCAACAACTCGAAAAGAC +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKRSTCC*STTRKD
Trigger: GTCTTTTCGAGTTGTTGATCAGCAGCAGGTGGAGCG...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR TCA 90 bp AAAATCTTCAATCAAGTCCAGAGATATGAGGGACTGGCTGAAAACAAGGACTTTTCCCAGTTGGTATGTTaGAACGCATGGTCAGTCCCT +
Preference number: 4 (lower is better)
Translates to: KIFNQVQRYEGLAENKDFSQLVC*NAWSVP
Trigger: AGGGACTGACCATGCGTTTCAACATACCAACTGGGA...AAAGTCCTTGTTTTCAGCCAGTCCCTCATATCTCTGGACTTGATTGAAGATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR TCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAATGTTGCTGTTGCTGCTaGTTGTACTGCTGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKCCCCC*LYCCWS
Trigger: GCTCCAGCAGCAGTACAATCAGCAGCAACAGCAACA...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR TCA 90 bp TATTTAATTTTACAGATGAACTCTCCACTTCTTGTTCAGTTCCACTGCTGCCATTGTTGCTGTTGCTGCTaGTTGTACTGCTGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: YLILQMNSPLLVQFHCCHCCCCC*LYCCWS
Trigger: GCTCCAGCAGCAGTACAATCAGCAGCAACAGCAACA...ATGGCAGCAGTGGAACTGAACAAGAAGTGGAGAGTTCATCTGTAAAATTAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR TCA 90 bp ATGAACATAGCTAAGGGAAGGCTACAAAATATTCAGCTCATTTGGAGGCCAGGTAGTGCAAAATCACATTaGTTTCCCTTGGGAAGGTCC +
Preference number: 4 (lower is better)
Translates to: MNIAKGRLQNIQLIWRPGSAKSH*FPLGRS
Trigger: GGACCTTCCCAAGGGAAATCAATGTGATTTTGCACT...ACCTGGCCTCCAAATGAGCTGAATATTTTGTAGCCTTCCCTTAGCTATGTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373344.11
CDS-3UTR GCA 90 bp AAAGCAGTATTAAGAGGACAAACCACTAACGCCGTGCTGAAATCCAGTTTGTCACCTTTCGACCAAGGTTaGGTAGAATGCATTTCTTGC +
Preference number: 4 (lower is better)
Translates to: KAVLRGQTTNAVLKSSLSPFDQG*VECISC
Trigger: GCAAGAAATGCATTCTACGCAACCTTGGTCGAAAGG...TGACAAACTGGATTTCAGCACGGCGTTAGTGGTTTGTCCTCTTAATACTGCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR GCA 90 bp TCCACATTTCCTTCACCACCTCCCCGAGATCTTGAATTCCAGACCTTAATCACTAAATACGCTGTTACATaGAGTGACCAAGTCCAACAA +
Preference number: 4 (lower is better)
Translates to: STFPSPPPRDLEFQTLITKYAVT*SDQVQQ
Trigger: TTGTTGGACTTGGTCACTGCATGTAACAGCGTATTT...AGTGATTAAGGTCTGGAATTCAAGATCTCGGGGAGGTGGTGAAGGAAATGTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR GCA 90 bp ATGAACATAGCTAAGGGAAGGCTACAAAATATTCAGCTCATTTGGAGGCCAGGTGAAGCACTTGCTTGCTaGTTCTTAGGAAGTCGATCT +
Preference number: 4 (lower is better)
Translates to: MNIAKGRLQNIQLIWRPGEALAC*FLGSRS
Trigger: AGATCGACTTCCTAAGAAGCAGCAAGCAAGTGCTTC...ACCTGGCCTCCAAATGAGCTGAATATTTTGTAGCCTTCCCTTAGCTATGTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373344.11
CDS-3UTR GCA 90 bp AAAATCTTCAATCAAGTCCAGAGATATGAGGGACTGGCTGAAAACAAGGACTTTCAACTCTGCTTTCTTTaGAGACCTTGTTCTGGGCCG +
Preference number: 4 (lower is better)
Translates to: KIFNQVQRYEGLAENKDFQLCFL*RPCSGP
Trigger: CGGCCCAGAACAAGGTCTGCAAAGAAAGCAGAGTTG...AAAGTCCTTGTTTTCAGCCAGTCCCTCATATCTCTGGACTTGATTGAAGATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR GCA 90 bp AAAGCAGTATTAAGAGGACAAACCACTAACGCCGTGCTGAAATCCAGTTTGTCATACAGTGGGCAAGAATaGATCCTGAACCTGGAGATT +
Preference number: 4 (lower is better)
Translates to: KAVLRGQTTNAVLKSSLSYSGQE*ILNLEI
Trigger: AATCTCCAGGTTCAGGATGCATTCTTGCCCACTGTA...TGACAAACTGGATTTCAGCACGGCGTTAGTGGTTTGTCCTCTTAATACTGCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480283.5
ENST00000623242.3
CDS-3UTR GCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACTGTAATGGTGGTGGCTaGATACCACCAGCCACTGGC +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNCNGGG*IPPATG
Trigger: GCCAGTGGCTGGTGGTATGCAGCCACCACCATTACA...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR CCA 90 bp ATGAACATAGCTAAGGGAAGGCTACAAAATATTCAGCTCATTTGGAGGCCAGGTACTTGCTTTCACTCATaGGCTCAGCGGTCATGTTTT +
Preference number: 4 (lower is better)
Translates to: MNIAKGRLQNIQLIWRPGTCFHS*AQRSCF
Trigger: AAAACATGACCGCTGAGCCCATGAGTGAAAGCAAGT...ACCTGGCCTCCAAATGAGCTGAATATTTTGTAGCCTTCCCTTAGCTATGTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373344.11
CDS-3UTR CCA 90 bp TTCATCCAATTCAAAGCAGTATTAAGAGGACAAACCACTAACGCCGTGCTGAAATATCGACACCATCAGTaGAAGCACTTGCTTGCTGCT +
Preference number: 4 (lower is better)
Translates to: FIQFKAVLRGQTTNAVLKYRHHQ*KHLLAA
Trigger: AGCAGCAAGCAAGTGCTTCCACTGATGGTGTCGATA...TTTCAGCACGGCGTTAGTGGTTTGTCCTCTTAATACTGCTTTGAATTGGATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR CCA 90 bp ACCTGTAAAGTCTTACCAAGGCCCATACAGTGGGCAAGAATGCATCCTGAACCTCCTATGTCTGTATCTTaGCTTCTTAGATTCTTCAGA +
Preference number: 4 (lower is better)
Translates to: TCKVLPRPIQWARMHPEPPMSVS*LLRFFR
Trigger: TCTGAAGAATCTAAGAAGCCAAGATACAGACATAGG...AGGTTCAGGATGCATTCTTGCCCACTGTATGGGCCTTGGTAAGACTTTACAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR CCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAATTGCAGACCTTGTTCTaGGCCGCTGTTCATCTTCGG +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKLQTLF*AAVHLR
Trigger: CCGAAGATGAACAGCGGCCCAGAACAAGGTCTGCAA...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR CCA 90 bp AACAAGGACTTTATCCCCAATTTCCTCTGCCATTCGAAGAATTTCAAAGAGAAGGTACCAGTCTGGAGCTaGGCTGCTTGGATTAGAAGA +
Preference number: 4 (lower is better)
Translates to: NKDFIPNFLCHSKNFKEKVPVWS*AAWIRR
Trigger: TCTTCTAATCCAAGCAGCCCAGCTCCAGACTGGTAC...CTTCTCTTTGAAATTCTTCGAATGGCAGAGGAAATTGGGGATAAAGTCCTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480283.5
ENST00000623316.1
CDS-3UTR CCA 90 bp ATGAACATAGCTAAGGGAAGGCTACAAAATATTCAGCTCATTTGGAGGCCAGGTAAGTATGGTATCCTTTaGCAGCATGGGAGTATCCCT +
Preference number: 4 (lower is better)
Translates to: MNIAKGRLQNIQLIWRPGKYGIL*QHGSIP
Trigger: AGGGATACTCCCATGCTGCCAAAGGATACCATACTT...ACCTGGCCTCCAAATGAGCTGAATATTTTGTAGCCTTCCCTTAGCTATGTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373344.11
CDS-3UTR CCA 90 bp TCTTCAATCAAGTCCAGAGATATGAGGGACTGGCTGAAAACAAGGACTTTATCCAAGTATGGTATCCTTTaGCAGCATGGGAGTATCCCT +
Preference number: 4 (lower is better)
Translates to: SSIKSRDMRDWLKTRTLSKYGIL*QHGSIP
Trigger: AGGGATACTCCCATGCTGCCAAAGGATACCATACTT...GGATAAAGTCCTTGTTTTCAGCCAGTCCCTCATATCTCTGGACTTGATTGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR CCA 90 bp GACTTTATCCCCAATTTCCTCTGCCATTCGAAGAATTTCAAAGAGAAGTACCATGGAGCTCTGCAAGTATaGTATCCTTTGGCAGCATGG +
Preference number: 4 (lower is better)
Translates to: DFIPNFLCHSKNFKEKYHGALQV*YPLAAW
Trigger: CCATGCTGCCAAAGGATACCATACTTGCAGAGCTCC...ATGGTACTTCTCTTTGAAATTCTTCGAATGGCAGAGGAAATTGGGGATAAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR CCA 90 bp AAAATCTTCAATCAAGTCCAGAGATATGAGGGACTGGCTGAAAACAAGGACTTTGCTAACGCCTGTACTTaGGCCTCTGAGAGATTCATG +
Preference number: 4 (lower is better)
Translates to: KIFNQVQRYEGLAENKDFANACT*ASERFM
Trigger: CATGAATCTCTCAGAGGCCCAAGTACAGGCGTTAGC...AAAGTCCTTGTTTTCAGCCAGTCCCTCATATCTCTGGACTTGATTGAAGATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR CCA 90 bp GACTTTATCCCCAATTTCCTCTGCCATTCGAAGAATTTCAAAGAGAAGTACCATCCAACTGGTAACAGTTaGCCAGAGTGTACTGCCTTC +
Preference number: 4 (lower is better)
Translates to: DFIPNFLCHSKNFKEKYHPTGNS*PECTAF
Trigger: GAAGGCAGTACACTCTGGCCAACTGTTACCAGTTGG...ATGGTACTTCTCTTTGAAATTCTTCGAATGGCAGAGGAAATTGGGGATAAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR CCA 90 bp TCCACATTTCCTTCACCACCTCCCCGAGATCTTGAATTCCAGACCTTAATCACTATCTTCTATGTGCTTTaGTGCATACATCGCTCAAGA +
Preference number: 4 (lower is better)
Translates to: STFPSPPPRDLEFQTLITIFYVL*CIHRSR
Trigger: TCTTGAGCGATGTATGCACCAAAGCACATAGAAGAT...AGTGATTAAGGTCTGGAATTCAAGATCTCGGGGAGGTGGTGAAGGAAATGTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR CAA 72 bp TCTAAAACCTCAGCATCAGCATCTGTAACAAAATCTTaGTACCAGTCTGGAGCTGGGCTGCTTGGATTAGAA +
Preference number: 4 (lower is better)
Translates to: SKTSASASVTKS*YQSGAGLLGLE
Trigger: TTCTAATCCAAGCAGCCCAGCTCCAGACTGGTACAAAGATTTTGTTACAGATGCTGATGCTGAGGTTTTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR TCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACGGTCATGTTTTCGCTTaGACGCCTTGTCGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNGHVFA*TPCRLL
Trigger: CAGAAGCCGACAAGGCGTTCAAGCGAAAACATGACC...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR TCA 90 bp ATGAACATAGCTAAGGGAAGGCTACAAAATATTCAGCTCATTTGGAGGCCAGGTTTCATCCATTCCATCTaGGTCACGGCTAATATCATC +
Preference number: 4 (lower is better)
Translates to: MNIAKGRLQNIQLIWRPGFIHSI*VTANII
Trigger: GATGATATTAGCCGTGACTCAGATGGAATGGATGAA...ACCTGGCCTCCAAATGAGCTGAATATTTTGTAGCCTTCCCTTAGCTATGTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373344.11
CDS-3UTR TCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAACGCTGTTACATGCAGTaGCCAAGTCCAACAAAGGCT +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKRCYMQ*PSPTKA
Trigger: AGCCTTTGTTGGACTTGGTCACTGCATGTAACAGCG...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR TCA 90 bp ATGAACATAGCTAAGGGAAGGCTACAAAATATTCAGCTCATTTGGAGGCCAGGTTCTTCCAATGCAAGATaGGCCTTCTTAATATCAGCC +
Preference number: 4 (lower is better)
Translates to: MNIAKGRLQNIQLIWRPGSSNAR*AFLISA
Trigger: GGCTGATATTAAGAAGGCTCATCTTGCATTGGAAGA...ACCTGGCCTCCAAATGAGCTGAATATTTTGTAGCCTTCCCTTAGCTATGTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373344.11
CDS-3UTR TCA 90 bp TGGAACCATCTAAACGGTAATAGTCAATGTTTCGAAGCCACTTCCCCTCACCTTATGCCCTTAGGAAAATaGCAAATTTCTTCTCGCTCA +
Preference number: 4 (lower is better)
Translates to: WNHLNGNSQCFEATSPHLMPLGK*QISSRS
Trigger: TGAGCGAGAAGAAATTTGTCATTTTCCTAAGGGCAT...AAGGTGAGGGGAAGTGGCTTCGAAACATTGACTATTACCGTTTAGATGGTTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR TCA 90 bp CAATTCAAAGCAGTATTAAGAGGACAAACCACTAACGCCGTGCTGAAATCCAGTCTGGATGAATCTTCTTaGACCTTAATACGTCGCCTT +
Preference number: 4 (lower is better)
Translates to: QFKAVLRGQTTNAVLKSSLDESS*TLIRRL
Trigger: AAGGCGACGTATTAAGGTTCAAGAAGATTCATCCAG...ACTGGATTTCAGCACGGCGTTAGTGGTTTGTCCTCTTAATACTGCTTTGAATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR TCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAACCACTAACGCCGTGCTaGAATCCAGTTTGTCACACA +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKPLTPC*NPVCHT
Trigger: TGTGTGACAAACTGGATTTCAGCACGGCGTTAGTGG...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR TCA 90 bp CTTCTCTGCTTCATACTCAGCCCAAGCTGCTTTTCTTTCTTCTTCAGTCAACTCTGCAAACACCAAGGATaGGTCCATATTCTACTTAAC +
Preference number: 4 (lower is better)
Translates to: LLCFILSPSCFSFFFSQLCKHQG*VHILLN
Trigger: GTTAAGTAGAATATGGACTCATCCTTGGTGTTTGCA...GAGTTGACTGAAGAAGAAAGAAAAGCAGCTTGGGCTGAGTATGAAGCAGAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR TCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACAGCCCACTTCTTCCTTaGCTGTGCAGTAGTGGAACC +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNSPLLP*LCSSGT
Trigger: GGTTCCACTACTGCACAGTCAAGGAAGAAGTGGGCT...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR TCA 90 bp TCCACATTTCCTTCACCACCTCCCCGAGATCTTGAATTCCAGACCTTAATCACTCAAAGCGATAAACTCTaGATATACTCTGGATGTCAT +
Preference number: 4 (lower is better)
Translates to: STFPSPPPRDLEFQTLITQSDKL*IYSGCH
Trigger: ATGACATCCAGAGTATATTCAGAGTTTATCGCTTTG...AGTGATTAAGGTCTGGAATTCAAGATCTCGGGGAGGTGGTGAAGGAAATGTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR TCA 90 bp TCTAAAACCTCAGCATCAGCATCTGTAACAAAATCTTTGTACCAGTCTGGAGCTAACTCGAAAAGACAGTaGCTGCTTAGTTACTTGCCG +
Preference number: 4 (lower is better)
Translates to: SKTSASASVTKSLYQSGANSKRQ*LLSYLP
Trigger: CGGCAAGTAACTAAGCAGTCACTGTCTTTTCGAGTT...AGCTCCAGACTGGTACAAAGATTTTGTTACAGATGCTGATGCTGAGGTTTTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR TCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACCGCTCCACCTGCTGCTaGTCAACAACTCGAAAAGAC +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNRSTCC*STTRKD
Trigger: GTCTTTTCGAGTTGTTGATCAGCAGCAGGTGGAGCG...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR TCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAATCCCAGTTGGTATGTTaGAACGCATGGTCAGTCCCT +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKSQLVC*NAWSVP
Trigger: AGGGACTGACCATGCGTTTCAACATACCAACTGGGA...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR TCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAAAGGTCCTCCAGCTGTTaGTTACTCATTGCTGACAGG +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKRSSSC*LLIADR
Trigger: CCTGTCAGCAATGAGTAATCAACAGCTGGAGGACCT...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR TCA 90 bp ATGAACATAGCTAAGGGAAGGCTACAAAATATTCAGCTCATTTGGAGGCCAGGTACTTTTTCTCTTCCTTaGTTAATGAGGTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: MNIAKGRLQNIQLIWRPGTFSLP*LMRSSS
Trigger: GCTGGAGGACCTCATTAATCAAGGAAGAGAAAAAGT...ACCTGGCCTCCAAATGAGCTGAATATTTTGTAGCCTTCCCTTAGCTATGTTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373344.11
CDS-3UTR TCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACTGTTGCTGTTGCTGCTaGTTGTACTGCTGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNCCCCC*LYCCWS
Trigger: GCTCCAGCAGCAGTACAATCAGCAGCAACAGCAACA...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR TCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAACCACCAGCCACTGGCTaGTACATTCCTCTCATATCA +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKPPATG*YIPLIS
Trigger: TGATATGAGAGGAATGTATCAGCCAGTGGCTGGTGG...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR TCA 90 bp ATGAACATAGCTAAGGGAAGGCTACAAAATATTCAGCTCATTTGGAGGCCAGGTCTGCTTGACTTAAAATaGGTGTTACAGCTGTTGGGA +
Preference number: 4 (lower is better)
Translates to: MNIAKGRLQNIQLIWRPGLLDLK*VLQLLG
Trigger: TCCCAACAGCTGTAACACTCATTTTAAGTCAAGCAG...ACCTGGCCTCCAAATGAGCTGAATATTTTGTAGCCTTCCCTTAGCTATGTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373344.11
CDS-3UTR TCA 90 bp CATGCACTATACCATGCTGTCTTCTTGTTGAAGATTATGAGCATGGGGTATGCTTTTGTATCCCCATCATaGCTACATAACCCATGGGTA +
Preference number: 4 (lower is better)
Translates to: HALYHAVFLLKIMSMGYAFVSPS*LHNPWV
Trigger: TACCCATGGGTTATGTAGTCATGATGGGGATACAAA...AGCATACCCCATGCTCATAATCTTCAACAAGAAGACAGCATGGTATAGTGCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000493470.2
CDS-3UTR GCA 90 bp AAAGCAGTATTAAGAGGACAAACCACTAACGCCGTGCTGAAATCCAGTTTGTCACCAATGTATTCAACTTaGTTTCACTCATGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: KAVLRGQTTNAVLKSSLSPMYST*FHSWAQ
Trigger: CTGAGCCCATGAGTGAAAGCAAGTTGAATACATTGG...TGACAAACTGGATTTCAGCACGGCGTTAGTGGTTTGTCCTCTTAATACTGCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR GCA 90 bp TGGAACCATCTAAACGGTAATAGTCAATGTTTCGAAGCCACTTCCCCTCACCTTCAAGGTTGCGTAGAATaGATTTCTTGCAGAAAGCAT +
Preference number: 4 (lower is better)
Translates to: WNHLNGNSQCFEATSPHLQGCVE*ISCRKH
Trigger: ATGCTTTCTGCAAGAAATGCATTCTACGCAACCTTG...AAGGTGAGGGGAAGTGGCTTCGAAACATTGACTATTACCGTTTAGATGGTTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR GCA 90 bp AGAAAATCTTCAATCAAGTCCAGAGATATGAGGGACTGGCTGAAAACAAGGACTGAAGCACTTGCTTGCTaGTTCTTAGGAAGTCGATCT +
Preference number: 4 (lower is better)
Translates to: RKSSIKSRDMRDWLKTRTEALAC*FLGSRS
Trigger: AGATCGACTTCCTAAGAAGCAGCAAGCAAGTGCTTC...AGTCCTTGTTTTCAGCCAGTCCCTCATATCTCTGGACTTGATTGAAGATTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR GCA 90 bp AAGGCTCTGGGTGACAAATGTAGCAATACCATTGGTTGTTTTCATCCATTATTGGTGGAAGCACTTGCTTaGTGCTTCTTAGGAAGTCGA +
Preference number: 4 (lower is better)
Translates to: KALGDKCSNTIGCFHPLLVEALA*CFLGSR
Trigger: TCGACTTCCTAAGAAGCAGCAAGCAAGTGCTTCCAC...CAATAATGGATGAAAACAACCAATGGTATTGCTACATTTGTCACCCAGAGCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR GCA 90 bp ATGAACATAGCTAAGGGAAGGCTACAAAATATTCAGCTCATTTGGAGGCCAGGTCGAAAAGACAGTGACTaGTTAGTTACTTGCCGATCA +
Preference number: 4 (lower is better)
Translates to: MNIAKGRLQNIQLIWRPGRKDSD*LVTCRS
Trigger: TGATCGGCAAGTAACTAAGCAGTCACTGTCTTTTCG...ACCTGGCCTCCAAATGAGCTGAATATTTTGTAGCCTTCCCTTAGCTATGTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373344.11
CDS-3UTR GCA 90 bp TATTTAATTTTACAGATGAACTCTCCACTTCTTGTTCAGTTCCACTGCTGCCATCAGTCCCTTCTTCTCTaGTTCATACTCAGCCCAAGC +
Preference number: 4 (lower is better)
Translates to: YLILQMNSPLLVQFHCCHQSLLL*FILSPS
Trigger: GCTTGGGCTGAGTATGAAGCAGAGAAGAAGGGACTG...ATGGCAGCAGTGGAACTGAACAAGAAGTGGAGAGTTCATCTGTAAAATTAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR GCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAACAGTCCCTTCTTCTCTaGTTCATACTCAGCCCAAGC +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKQSLLL*FILSPS
Trigger: GCTTGGGCTGAGTATGAAGCAGAGAAGAAGGGACTG...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR GCA 90 bp TTCATCCAATTCAAAGCAGTATTAAGAGGACAAACCACTAACGCCGTGCTGAAAAGGTTGAATCCTCACTaGTGTCACACTGTTTGTTGC +
Preference number: 4 (lower is better)
Translates to: FIQFKAVLRGQTTNAVLKRLNPH*CHTVCC
Trigger: GCAACAAACAGTGTGACAGCAGTGAGGATTCAACCT...TTTCAGCACGGCGTTAGTGGTTTGTCCTCTTAATACTGCTTTGAATTGGATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR CCA 90 bp ATGAACATAGCTAAGGGAAGGCTACAAAATATTCAGCTCATTTGGAGGCCAGGTGTCCAACAAAGGCTCTaGGTGACAAATGTAGCAATA +
Preference number: 4 (lower is better)
Translates to: MNIAKGRLQNIQLIWRPGVQQRL*VTNVAI
Trigger: TATTGCTACATTTGTCACCCAGAGCCTTTGTTGGAC...ACCTGGCCTCCAAATGAGCTGAATATTTTGTAGCCTTCCCTTAGCTATGTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373344.11
CDS-3UTR CCA 90 bp ATGAACATAGCTAAGGGAAGGCTACAAAATATTCAGCTCATTTGGAGGCCAGGTAACTGGAGTTCATGTTaGCTGTGGTCTCAATCAGTT +
Preference number: 4 (lower is better)
Translates to: MNIAKGRLQNIQLIWRPGNWSSC*LWSQSV
Trigger: AACTGATTGAGACCACAGCCAACATGAACTCCAGTT...ACCTGGCCTCCAAATGAGCTGAATATTTTGTAGCCTTCCCTTAGCTATGTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373344.11
CDS-3UTR CCA 90 bp GTTCCTCTGTTGGAACATTCTGATGCATGTGCTCACTATCTACCTGTTTTCTTGTGTAGTCTTTACACGTaGGGATCTTCGAAGATCAGA +
Preference number: 4 (lower is better)
Translates to: VPLLEHSDACAHYLPVFLCSLYT*GSSKIR
Trigger: TCTGATCTTCGAAGATCCCCACGTGTAAAGACTACA...CAAGAAAACAGGTAGATAGTGAGCACATGCATCAGAATGTTCCAACAGAGGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR CCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAACCAAGGCCCATACAGTaGGCAAGAATGCATCCTGAA +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKPRPIQ*ARMHPE
Trigger: TTCAGGATGCATTCTTGCCCACTGTATGGGCCTTGG...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR CCA 90 bp ATGAACATAGCTAAGGGAAGGCTACAAAATATTCAGCTCATTTGGAGGCCAGGTCGGAGCTTAAACTCATaGAGGTTTCATCAGAATCTG +
Preference number: 4 (lower is better)
Translates to: MNIAKGRLQNIQLIWRPGRSLNS*RFHQNL
Trigger: CAGATTCTGATGAAACCTCCATGAGTTTAAGCTCCG...ACCTGGCCTCCAAATGAGCTGAATATTTTGTAGCCTTCCCTTAGCTATGTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373344.11
CDS-3UTR CCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAAGTACCAGTCTGGAGCTaGGCTGCTTGGATTAGAAGA +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKVPVWS*AAWIRR
Trigger: TCTTCTAATCCAAGCAGCCCAGCTCCAGACTGGTAC...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR CCA 90 bp TGGAACCATCTAAACGGTAATAGTCAATGTTTCGAAGCCACTTCCCCTCACCTTAGAGATATGAGGGACTaGCTGAAAACAAGGACTTTA +
Preference number: 4 (lower is better)
Translates to: WNHLNGNSQCFEATSPHLRDMRD*LKTRTL
Trigger: TAAAGTCCTTGTTTTCAGCCAGTCCCTCATATCTCT...AAGGTGAGGGGAAGTGGCTTCGAAACATTGACTATTACCGTTTAGATGGTTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480283.5
ENST00000623316.1
CDS-3UTR CCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAAGGAGCTCTGCAAGTATaGTATCCTTTGGCAGCATGG +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKGALQV*YPLAAW
Trigger: CCATGCTGCCAAAGGATACCATACTTGCAGAGCTCC...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR CCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAAGCTAACGCCTGTACTTaGGCCTCTGAGAGATTCATG +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKANACT*ASERFM
Trigger: CATGAATCTCTCAGAGGCCCAAGTACAGGCGTTAGC...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR CCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAACAAATTTGGGGGCTTTaGCATCATGAGGTGACCCAG +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKQIWGL*HHEVTQ
Trigger: CTGGGTCACCTCATGATGCCAAAGCCCCCAAATTTG...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR CCA 90 bp ATGAACATAGCTAAGGGAAGGCTACAAAATATTCAGCTCATTTGGAGGCCAGGTCACATTGATTTCCCTTaGGAAGGTCCTGGATTTTTG +
Preference number: 4 (lower is better)
Translates to: MNIAKGRLQNIQLIWRPGHIDFP*EGPGFL
Trigger: CAAAAATCCAGGACCTTCCCAAGGGAAATCAATGTG...ACCTGGCCTCCAAATGAGCTGAATATTTTGTAGCCTTCCCTTAGCTATGTTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373344.11
CDS-3UTR CCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAACCAACTGGTAACAGTTaGCCAGAGTGTACTGCCTTC +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKPTGNS*PECTAF
Trigger: GAAGGCAGTACACTCTGGCCAACTGTTACCAGTTGG...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
3UTR CAA 72 bp CCAAAATTCCATGCACTATACCATGCTGTCTTCTTGTaGAAGATTATGAGCATGGGGTATGCTATTGTCCAG +
Preference number: 4 (lower is better)
Translates to: PKFHALYHAVFL*KIMSMGYAIVQ
Trigger: CTGGACAATAGCATACCCCATGCTCATAATCTTCAACAAGAAGACAGCATGGTATAGTGCATGGAATTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493470.2
3UTR CAA 72 bp GGGGTTCAGACCACAACTTTTATAGCCATCTTTATCTaGTGGAACTTCCTGACAATCAGCACCTTTAATTGG +
Preference number: 4 (lower is better)
Translates to: GVQTTTFIAIFI*WNFLTISTFNW
Trigger: CCAATTAAAGGTGCTGATTGTCAGGAAGTTCCACAAGATAAAGATGGCTATAAAAGTTGTGGTCTGAACCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR CAA 72 bp AAAAGCATCTTCTTGGCAATTCTATTCTCAGGATCATaGTCGTCATCATCATCATCCACTGTGACAGGCACT +
Preference number: 4 (lower is better)
Translates to: KSIFLAILFSGS*SSSSSSTVTGT
Trigger: AGTGCCTGTCACAGTGGATGATGATGATGACGACAATGATCCTGAGAATAGAATTGCCAAGAAGATGCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR TCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACCGCTGTTACATGCAGTaGCCAAGTCCAACAAAGGCT +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNRCYMQ*PSPTKA
Trigger: AGCCTTTGTTGGACTTGGTCACTGCATGTAACAGCG...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR TCA 90 bp CTGAACACCATCTACTTGATGGGGTTTCAATTTGATAACCATATTTCTATGAACCGCTGTTACATGCAGTaGCCAAGTCCAACAAAGGCT +
Preference number: 4 (lower is better)
Translates to: LNTIYLMGFQFDNHISMNRCYMQ*PSPTKA
Trigger: AGCCTTTGTTGGACTTGGTCACTGCATGTAACAGCG...GTTCATAGAAATATGGTTATCAAATTGAAACCCCATCAAGTAGATGGTGTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR TCA 90 bp AAATCTTCAATCAAGTCCAGAGATATGAGGGACTGGCTGAAAACAAGGACTTTACCCTTGATGATCAACTaGACTCTGAACTTCCATAGC +
Preference number: 4 (lower is better)
Translates to: KSSIKSRDMRDWLKTRTLPLMIN*TLNFHS
Trigger: GCTATGGAAGTTCAGAGTTCAGTTGATCATCAAGGG...TAAAGTCCTTGTTTTCAGCCAGTCCCTCATATCTCTGGACTTGATTGAAGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR TCA 90 bp ATGAACATAGCTAAGGGAAGGCTACAAAATATTCAGCTCATTTGGAGGCCAGGTTCTTGTGGAACTTCCTaGCAATCAGCACCTTTAATT +
Preference number: 4 (lower is better)
Translates to: MNIAKGRLQNIQLIWRPGSCGTS*QSAPLI
Trigger: AATTAAAGGTGCTGATTGTCAGGAAGTTCCACAAGA...ACCTGGCCTCCAAATGAGCTGAATATTTTGTAGCCTTCCCTTAGCTATGTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373344.11
CDS-3UTR TCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAATCTGAAGAAGAACTGTaGCTCATCCTGCTCACCTCT +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKSEEEL*LILLTS
Trigger: AGAGGTGAGCAGGATGAGTCACAGTTCTTCTTCAGA...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR TCA 90 bp ATGAACATAGCTAAGGGAAGGCTACAAAATATTCAGCTCATTTGGAGGCCAGGTTCATCTTTCCCCGCCTaGGTCTTTAAATCATACAAA +
Preference number: 4 (lower is better)
Translates to: MNIAKGRLQNIQLIWRPGSSFPA*VFKSYK
Trigger: TTTGTATGATTTAAAGACTCAGGCGGGGAAAGATGA...ACCTGGCCTCCAAATGAGCTGAATATTTTGTAGCCTTCCCTTAGCTATGTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373344.11
CDS-3UTR TCA 90 bp GTTCCTCTGTTGGAACATTCTGATGCATGTGCTCACTATCTACCTGTTTTCTTGTTCAGTGCCATCAGATaGAGATTCATACTGTTGTTC +
Preference number: 4 (lower is better)
Translates to: VPLLEHSDACAHYLPVFLFSAIR*RFILLF
Trigger: GAACAACAGTATGAATCTTCATCTGATGGCACTGAA...CAAGAAAACAGGTAGATAGTGAGCACATGCATCAGAATGTTCCAACAGAGGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR TCA 90 bp GACTTTATCCCCAATTTCCTCTGCCATTCGAAGAATTTCAAAGAGAAGTACCATTTCTGGCTCATCATCTaGAGATCCATCCTCATCAGA +
Preference number: 4 (lower is better)
Translates to: DFIPNFLCHSKNFKEKYHFWLII*RSILIR
Trigger: TCTGATGAGGATGGATCTTCAGATGATGAGCCAGAA...ATGGTACTTCTCTTTGAAATTCTTCGAATGGCAGAGGAAATTGGGGATAAAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR TCA 90 bp AAAATCTTCAATCAAGTCCAGAGATATGAGGGACTGGCTGAAAACAAGGACTTTGGCAAGAATGCATCCTaGACCTGGAGATTTCTTTGT +
Preference number: 4 (lower is better)
Translates to: KIFNQVQRYEGLAENKDFGKNAS*TWRFLC
Trigger: ACAAAGAAATCTCCAGGTTCAGGATGCATTCTTGCC...AAAGTCCTTGTTTTCAGCCAGTCCCTCATATCTCTGGACTTGATTGAAGATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR TCA 90 bp CTGAACACCATCTACTTGATGGGGTTTCAATTTGATAACCATATTTCTATGAACCCACTAACGCCGTGCTaGAATCCAGTTTGTCACACA +
Preference number: 4 (lower is better)
Translates to: LNTIYLMGFQFDNHISMNPLTPC*NPVCHT
Trigger: TGTGTGACAAACTGGATTTCAGCACGGCGTTAGTGG...GTTCATAGAAATATGGTTATCAAATTGAAACCCCATCAAGTAGATGGTGTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480283.5
ENST00000623242.3
CDS-3UTR TCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACCCACTAACGCCGTGCTaGAATCCAGTTTGTCACACA +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNPLTPC*NPVCHT
Trigger: TGTGTGACAAACTGGATTTCAGCACGGCGTTAGTGG...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR TCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAAACCTCCCCGAGATCTTaGATTCCAGACCTTAATCAC +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKTSPRS*IPDLNH
Trigger: GTGATTAAGGTCTGGAATTCAAGATCTCGGGGAGGT...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR TCA 90 bp GTATTTTTCTCTTTGTTTACAGCATCCATCGCTCGAAACTCGGAATTTAAGTCTACCTCCCCGAGATCTTaGATTCCAGACCTTAATCAC +
Preference number: 4 (lower is better)
Translates to: VFFSLFTASIARNSEFKSTSPRS*IPDLNH
Trigger: GTGATTAAGGTCTGGAATTCAAGATCTCGGGGAGGT...AGACTTAAATTCCGAGTTTCGAGCGATGGATGCTGTAAACAAAGAGAAAAATAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR TCA 90 bp ACTTTATCCCCAATTTCCTCTGCCATTCGAAGAATTTCAAAGAGAAGTACCATTACCTCCCCGAGATCTTaGATTCCAGACCTTAATCAC +
Preference number: 4 (lower is better)
Translates to: TLSPISSAIRRISKRSTITSPRS*IPDLNH
Trigger: GTGATTAAGGTCTGGAATTCAAGATCTCGGGGAGGT...AATGGTACTTCTCTTTGAAATTCTTCGAATGGCAGAGGAAATTGGGGATAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480283.5
ENST00000623316.1
CDS-3UTR TCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACTCCCAGTTGGTATGTTaGAACGCATGGTCAGTCCCT +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNSQLVC*NAWSVP
Trigger: AGGGACTGACCATGCGTTTCAACATACCAACTGGGA...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR TCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACAGGTCCTCCAGCTGTTaGTTACTCATTGCTGACAGG +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNRSSSC*LLIADR
Trigger: CCTGTCAGCAATGAGTAATCAACAGCTGGAGGACCT...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR TCA 90 bp GACTTTATCCCCAATTTCCTCTGCCATTCGAAGAATTTCAAAGAGAAGTACCATATATCCTCAAGAGGTTaGATCCTCACTGCTGTCACA +
Preference number: 4 (lower is better)
Translates to: DFIPNFLCHSKNFKEKYHISSRG*ILTAVT
Trigger: TGTGACAGCAGTGAGGATTCAACCTCTTGAGGATAT...ATGGTACTTCTCTTTGAAATTCTTCGAATGGCAGAGGAAATTGGGGATAAAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR TCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAACTGTACTTGGGCCTCTaGGAGATTCATGTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKLYLGL*EIHVLL
Trigger: AAGGAGAACATGAATCTCTCAGAGGCCCAAGTACAG...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR TCA 90 bp CCACATAAACTGAACACCATCTACTTGATGGGGTTTCAATTTGATAACCATATTCCACCAGCCACTGGCTaGTACATTCCTCTCATATCA +
Preference number: 4 (lower is better)
Translates to: PHKLNTIYLMGFQFDNHIPPATG*YIPLIS
Trigger: TGATATGAGAGGAATGTATCAGCCAGTGGCTGGTGG...AATATGGTTATCAAATTGAAACCCCATCAAGTAGATGGTGTTCAGTTTATGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR TCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACCCACCAGCCACTGGCTaGTACATTCCTCTCATATCA +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNPPATG*YIPLIS
Trigger: TGATATGAGAGGAATGTATCAGCCAGTGGCTGGTGG...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR TCA 90 bp AAGGCTCTGGGTGACAAATGTAGCAATACCATTGGTTGTTTTCATCCATTATTGAGTGCAAAATCACATTaGTTTCCCTTGGGAAGGTCC +
Preference number: 4 (lower is better)
Translates to: KALGDKCSNTIGCFHPLLSAKSH*FPLGRS
Trigger: GGACCTTCCCAAGGGAAATCAATGTGATTTTGCACT...CAATAATGGATGAAAACAACCAATGGTATTGCTACATTTGTCACCCAGAGCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR TCA 90 bp ATCTCTCTTTTTGTTTCTTCTCAACAGGCCTTAATAAATAGGACCACCATATTGCTTGCAGGAAGACTGTaGGCGAGTCTTTCTAAGGCA +
Preference number: 4 (lower is better)
Translates to: ISLFVSSQQALINRTTILLAGRL*ASLSKA
Trigger: TGCCTTAGAAAGACTCGCTCACAGTCTTCCTGCAAG...CAATATGGTGGTCCTATTTATTAAGGCCTGTTGAGAAGAAACAAAAAGAGAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493470.2
CDS-3UTR GCA 90 bp ATGAACATAGCTAAGGGAAGGCTACAAAATATTCAGCTCATTTGGAGGCCAGGTCAAGGTTGCGTAGAATaGATTTCTTGCAGAAAGCAT +
Preference number: 4 (lower is better)
Translates to: MNIAKGRLQNIQLIWRPGQGCVE*ISCRKH
Trigger: ATGCTTTCTGCAAGAAATGCATTCTACGCAACCTTG...ACCTGGCCTCCAAATGAGCTGAATATTTTGTAGCCTTCCCTTAGCTATGTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373344.11
CDS-3UTR GCA 90 bp ATGAACATAGCTAAGGGAAGGCTACAAAATATTCAGCTCATTTGGAGGCCAGGTAAATACGCTGTTACATaGAGTGACCAAGTCCAACAA +
Preference number: 4 (lower is better)
Translates to: MNIAKGRLQNIQLIWRPGKYAVT*SDQVQQ
Trigger: TTGTTGGACTTGGTCACTGCATGTAACAGCGTATTT...ACCTGGCCTCCAAATGAGCTGAATATTTTGTAGCCTTCCCTTAGCTATGTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373344.11
CDS-3UTR GCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAAGTGGAAGCACTTGCTTaGTGCTTCTTAGGAAGTCGA +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKVEALA*CFLGSR
Trigger: TCGACTTCCTAAGAAGCAGCAAGCAAGTGCTTCCAC...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR GCA 90 bp GACTTTATCCCCAATTTCCTCTGCCATTCGAAGAATTTCAAAGAGAAGTACCATATCAGTGGAAGCACTTaGTTGCTGCTTCTTAGGAAG +
Preference number: 4 (lower is better)
Translates to: DFIPNFLCHSKNFKEKYHISGST*LLLLRK
Trigger: CTTCCTAAGAAGCAGCAAGCAAGTGCTTCCACTGAT...ATGGTACTTCTCTTTGAAATTCTTCGAATGGCAGAGGAAATTGGGGATAAAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR GCA 90 bp AACAAGGACTTTATCCCCAATTTCCTCTGCCATTCGAAGAATTTCAAAGAGAAGCTCACAGTCAATTTGTaGCGCAAAAGCCTATGTCTG +
Preference number: 4 (lower is better)
Translates to: NKDFIPNFLCHSKNFKEKLTVNL*RKSLCL
Trigger: CAGACATAGGCTTTTGCGGCACAAATTGACTGTGAG...CTTCTCTTTGAAATTCTTCGAATGGCAGAGGAAATTGGGGATAAAGTCCTTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR GCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACCAACTCTGCTTTCTTTaGAGACCTTGTTCTGGGCCG +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNQLCFL*RPCSGP
Trigger: CGGCCCAGAACAAGGTCTGCAAAGAAAGCAGAGTTG...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR GCA 90 bp ATGAACATAGCTAAGGGAAGGCTACAAAATATTCAGCTCATTTGGAGGCCAGGTACCATTTTCCCAGAATaGTCTAAAACCTCAGCATCA +
Preference number: 4 (lower is better)
Translates to: MNIAKGRLQNIQLIWRPGTIFPE*SKTSAS
Trigger: TGATGCTGAGGTTTTAGAGCATTCTGGGAAAATGGT...ACCTGGCCTCCAAATGAGCTGAATATTTTGTAGCCTTCCCTTAGCTATGTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373344.11
CDS-3UTR GCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACCAGTCCCTTCTTCTCTaGTTCATACTCAGCCCAAGC +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNQSLLL*FILSPS
Trigger: GCTTGGGCTGAGTATGAAGCAGAGAAGAAGGGACTG...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR GCA 90 bp TCTAAAACCTCAGCATCAGCATCTGTAACAAAATCTTTGTACCAGTCTGGAGCTGAGGTGACCCAGTGTTaGTTGTTGATAAGTCATTTG +
Preference number: 4 (lower is better)
Translates to: SKTSASASVTKSLYQSGAEVTQC*LLISHL
Trigger: CAAATGACTTATCAACAAGCAACACTGGGTCACCTC...AGCTCCAGACTGGTACAAAGATTTTGTTACAGATGCTGATGCTGAGGTTTTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR GCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAAAAGGTCCTGGATTTTTaGTTCTCATTGGGGGTGGTG +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKKVLDF*FSLGVV
Trigger: CACCACCCCCAATGAGAAGCAAAAATCCAGGACCTT...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR GCA 90 bp GAAATCAGATACCCTTATGCCCATTATTCCAAAATTCCATGCACTATACCATGCTGCTGTTTGTGCCCATaGCTAGGGTGTGTTATAATC +
Preference number: 4 (lower is better)
Translates to: EIRYPYAHYSKIPCTIPCCCLCP*LGCVII
Trigger: GATTATAACACACCCTAGGCATGGGCACAAACAGCA...GCATGGTATAGTGCATGGAATTTTGGAATAATGGGCATAAGGGTATCTGATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493470.2
CDS-3UTR GCA 90 bp CATGCACTATACCATGCTGTCTTCTTGTTGAAGATTATGAGCATGGGGTATGCTCCATGCACTATACCATaGTGTCTTCTTGTTGAAGAT +
Preference number: 4 (lower is better)
Translates to: HALYHAVFLLKIMSMGYAPCTIP*CLLVED
Trigger: ATCTTCAACAAGAAGACAGCATGGTATAGTGCATGG...AGCATACCCCATGCTCATAATCTTCAACAAGAAGACAGCATGGTATAGTGCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493470.2
CDS-3UTR CCA 90 bp TATTTAATTTTACAGATGAACTCTCCACTTCTTGTTCAGTTCCACTGCTGCCATATTCAGCACTGGCTCTaGCTGTACAATCACTGTACC +
Preference number: 4 (lower is better)
Translates to: YLILQMNSPLLVQFHCCHIQHWL*LYNHCT
Trigger: GGTACAGTGATTGTACAGCCAGAGCCAGTGCTGAAT...ATGGCAGCAGTGGAACTGAACAAGAAGTGGAGAGTTCATCTGTAAAATTAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR CCA 90 bp TGGAACCATCTAAACGGTAATAGTCAATGTTTCGAAGCCACTTCCCCTCACCTTTTTCATCCATTATTGTaGACAACTCCTTTCGACCAA +
Preference number: 4 (lower is better)
Translates to: WNHLNGNSQCFEATSPHLFHPLL*TTPFDQ
Trigger: TTGGTCGAAAGGAGTTGTCCACAATAATGGATGAAA...AAGGTGAGGGGAAGTGGCTTCGAAACATTGACTATTACCGTTTAGATGGTTCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR CCA 90 bp ATGAACATAGCTAAGGGAAGGCTACAAAATATTCAGCTCATTTGGAGGCCAGGTCACATTTCTCTAACTTaGGGTTCAGACCACAACTTT +
Preference number: 4 (lower is better)
Translates to: MNIAKGRLQNIQLIWRPGHISLT*GSDHNF
Trigger: AAAGTTGTGGTCTGAACCCCAAGTTAGAGAAATGTG...ACCTGGCCTCCAAATGAGCTGAATATTTTGTAGCCTTCCCTTAGCTATGTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373344.11
CDS-3UTR CCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAATATCGACACCATCAGTaGAAGCACTTGCTTGCTGCT +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKYRHHQ*KHLLAA
Trigger: AGCAGCAAGCAAGTGCTTCCACTGATGGTGTCGATA...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR CCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACCCAAGGCCCATACAGTaGGCAAGAATGCATCCTGAA +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNPRPIQ*ARMHPE
Trigger: TTCAGGATGCATTCTTGCCCACTGTATGGGCCTTGG...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR CCA 90 bp CTGAACACCATCTACTTGATGGGGTTTCAATTTGATAACCATATTTCTATGAACCCAAGGCCCATACAGTaGGCAAGAATGCATCCTGAA +
Preference number: 4 (lower is better)
Translates to: LNTIYLMGFQFDNHISMNPRPIQ*ARMHPE
Trigger: TTCAGGATGCATTCTTGCCCACTGTATGGGCCTTGG...GTTCATAGAAATATGGTTATCAAATTGAAACCCCATCAAGTAGATGGTGTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480283.5
ENST00000623242.3
CDS-3UTR CCA 90 bp AGAAAATCTTCAATCAAGTCCAGAGATATGAGGGACTGGCTGAAAACAAGGACTCGGAGCTTAAACTCATaGAGGTTTCATCAGAATCTG +
Preference number: 4 (lower is better)
Translates to: RKSSIKSRDMRDWLKTRTRSLNS*RFHQNL
Trigger: CAGATTCTGATGAAACCTCCATGAGTTTAAGCTCCG...AGTCCTTGTTTTCAGCCAGTCCCTCATATCTCTGGACTTGATTGAAGATTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480283.5
ENST00000623316.1
CDS-3UTR CCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAAATCTTTGTACCAGTCTaGAGCTGGGCTGCTTGGATT +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKIFVPV*SWAAWI
Trigger: AATCCAAGCAGCCCAGCTCCAGACTGGTACAAAGAT...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR CCA 90 bp TCCACATTTCCTTCACCACCTCCCCGAGATCTTGAATTCCAGACCTTAATCACTTCTTCTTCTTCTTTGTaGTCCAAAAGAGAATCATGT +
Preference number: 4 (lower is better)
Translates to: STFPSPPPRDLEFQTLITSSSSL*SKRESC
Trigger: ACATGATTCTCTTTTGGACCACAAAGAAGAAGAAGA...AGTGATTAAGGTCTGGAATTCAAGATCTCGGGGAGGTGGTGAAGGAAATGTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR CCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACGCTAACGCCTGTACTTaGGCCTCTGAGAGATTCATG +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNANACT*ASERFM
Trigger: CATGAATCTCTCAGAGGCCCAAGTACAGGCGTTAGC...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR CCA 90 bp ATGAACATAGCTAAGGGAAGGCTACAAAATATTCAGCTCATTTGGAGGCCAGGTTTAACATCAAGCTCCTaGCTGGCTTGTCTACTTAAT +
Preference number: 4 (lower is better)
Translates to: MNIAKGRLQNIQLIWRPGLTSSS*LACLLN
Trigger: ATTAAGTAGACAAGCCAGCCAGGAGCTTGATGTTAA...ACCTGGCCTCCAAATGAGCTGAATATTTTGTAGCCTTCCCTTAGCTATGTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373344.11
CDS-3UTR CCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAACATACCACCAGCCACTaGCTGATACATTCCTCTCAT +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKHTTSH*LIHSSH
Trigger: ATGAGAGGAATGTATCAGCCAGTGGCTGGTGGTATG...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR CCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAACCCTTGGGAAGGTCCTaGATTTTTGCTTCTCATTGG +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKPLGRS*IFASHW
Trigger: CCAATGAGAAGCAAAAATCCAGGACCTTCCCAAGGG...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR CCA 90 bp TATTTAATTTTACAGATGAACTCTCCACTTCTTGTTCAGTTCCACTGCTGCCATCCCTTGGGAAGGTCCTaGATTTTTGCTTCTCATTGG +
Preference number: 4 (lower is better)
Translates to: YLILQMNSPLLVQFHCCHPLGRS*IFASHW
Trigger: CCAATGAGAAGCAAAAATCCAGGACCTTCCCAAGGG...ATGGCAGCAGTGGAACTGAACAAGAAGTGGAGAGTTCATCTGTAAAATTAAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR CCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAAAGTGATATTTCATCATaGGAAAGTGGGGGAGAGGGG +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKSDISS*ESGGEG
Trigger: CCCCTCTCCCCCACTTTCCCATGATGAAATATCACT...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR CCA 90 bp ACTTTATCCCCAATTTCCTCTGCCATTCGAAGAATTTCAAAGAGAAGTACCATTAGTGATATTTCATCATaGGAAAGTGGGGGAGAGGGG +
Preference number: 4 (lower is better)
Translates to: TLSPISSAIRRISKRSTISDISS*ESGGEG
Trigger: CCCCTCTCCCCCACTTTCCCATGATGAAATATCACT...AATGGTACTTCTCTTTGAAATTCTTCGAATGGCAGAGGAAATTGGGGATAAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR CCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACCCAACTGGTAACAGTTaGCCAGAGTGTACTGCCTTC +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNPTGNS*PECTAF
Trigger: GAAGGCAGTACACTCTGGCCAACTGTTACCAGTTGG...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR CCA 90 bp GAAATCAGATACCCTTATGCCCATTATTCCAAAATTCCATGCACTATACCATGCCTTATCACTCCATTCTaGAACCTACCACCTATCCCA +
Preference number: 4 (lower is better)
Translates to: EIRYPYAHYSKIPCTIPCLITPF*NLPPIP
Trigger: TGGGATAGGTGGTAGGTTCCAGAATGGAGTGATAAG...GCATGGTATAGTGCATGGAATTTTGGAATAATGGGCATAAGGGTATCTGATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493470.2
CDS-3UTR TCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAATGTGCAAGGAAGTCATaGAGCTTCTGCACCAATGTA +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKCARKS*SFCTNV
Trigger: TACATTGGTGCAGAAGCTTCATGACTTCCTTGCACA...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR TCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAACCCTTGATGATCAACTaGACTCTGAACTTCCATAGC +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKPLMIN*TLNFHS
Trigger: GCTATGGAAGTTCAGAGTTCAGTTGATCATCAAGGG...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR TCA 90 bp TCTTCAATCAAGTCCAGAGATATGAGGGACTGGCTGAAAACAAGGACTTTATCCCATTTCATCAGAATCTaGATTTTGATCCACAGTCTC +
Preference number: 4 (lower is better)
Translates to: SSIKSRDMRDWLKTRTLSHFIRI*ILIHSL
Trigger: GAGACTGTGGATCAAAATTCAGATTCTGATGAAATG...GGATAAAGTCCTTGTTTTCAGCCAGTCCCTCATATCTCTGGACTTGATTGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR TCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACTCTGAAGAAGAACTGTaGCTCATCCTGCTCACCTCT +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNSEEEL*LILLTS
Trigger: AGAGGTGAGCAGGATGAGTCACAGTTCTTCTTCAGA...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR TCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACAACTGTGCCTTCTGCTaGAGAGAAAGTCTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNNCAFC*RESLSL
Trigger: GAGAGAGAGACTTTCTCTTCAGCAGAAGGCACAGTT...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR TCA 90 bp ATGAACATAGCTAAGGGAAGGCTACAAAATATTCAGCTCATTTGGAGGCCAGGTGATCTCTTAATTCCATaGTGGTCGTGTCTTTATCAA +
Preference number: 4 (lower is better)
Translates to: MNIAKGRLQNIQLIWRPGDLLIP*WSCLYQ
Trigger: TTGATAAAGACACGACCATCATGGAATTAAGAGATC...ACCTGGCCTCCAAATGAGCTGAATATTTTGTAGCCTTCCCTTAGCTATGTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373344.11
CDS-3UTR TCA 90 bp GTTCCTCTGTTGGAACATTCTGATGCATGTGCTCACTATCTACCTGTTTTCTTGGATCTCTTAATTCCATaGTGGTCGTGTCTTTATCAA +
Preference number: 4 (lower is better)
Translates to: VPLLEHSDACAHYLPVFLDLLIP*WSCLYQ
Trigger: TTGATAAAGACACGACCATCATGGAATTAAGAGATC...CAAGAAAACAGGTAGATAGTGAGCACATGCATCAGAATGTTCCAACAGAGGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR TCA 90 bp GTTCCTCTGTTGGAACATTCTGATGCATGTGCTCACTATCTACCTGTTTTCTTGTATATCAGAAGAAGATaGGGATGTAATGTCAGCTTG +
Preference number: 4 (lower is better)
Translates to: VPLLEHSDACAHYLPVFLYIRRR*GCNVSL
Trigger: CAAGCTGACATTACATCCTCATCTTCTTCTGATATA...CAAGAAAACAGGTAGATAGTGAGCACATGCATCAGAATGTTCCAACAGAGGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR TCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAATTCTGGCTCATCATCTaGAGATCCATCCTCATCAGA +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKFWLII*RSILIR
Trigger: TCTGATGAGGATGGATCTTCAGATGATGAGCCAGAA...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR TCA 90 bp AAACCAACTTGGTTGTTATTGGACACTTGGTGGGTGAAGCATCTTCAATTTCTATGGACACTTGGTGGGTaGAGCATCTTCAATTTCTAT +
Preference number: 4 (lower is better)
Translates to: KPTWLLLDTWWVKHLQFLWTLGG*SIFNFY
Trigger: ATAGAAATTGAAGATGCTTCACCCACCAAGTGTCCA...TAGAAATTGAAGATGCTTCACCCACCAAGTGTCCAATAACAACCAAGTTGGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480283.5
ENST00000623242.3
CDS-3UTR TCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAAGGCAAGAATGCATCCTaGACCTGGAGATTTCTTTGT +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKGKNAS*TWRFLC
Trigger: ACAAAGAAATCTCCAGGTTCAGGATGCATTCTTGCC...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR TCA 90 bp ATGAACATAGCTAAGGGAAGGCTACAAAATATTCAGCTCATTTGGAGGCCAGGTTTCACATTCCTTCCTTaGGCAAGATTTCTATACATC +
Preference number: 4 (lower is better)
Translates to: MNIAKGRLQNIQLIWRPGFTFLP*ARFLYI
Trigger: GATGTATAGAAATCTTGCTCAAGGAAGGAATGTGAA...ACCTGGCCTCCAAATGAGCTGAATATTTTGTAGCCTTCCCTTAGCTATGTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373344.11
CDS-3UTR TCA 90 bp CAATTCAAAGCAGTATTAAGAGGACAAACCACTAACGCCGTGCTGAAATCCAGTAATAATCCTCCTCCTTaGTCGTATAGAATTCATAGC +
Preference number: 4 (lower is better)
Translates to: QFKAVLRGQTTNAVLKSSNNPPP*SYRIHS
Trigger: GCTATGAATTCTATACGATCAAGGAGGAGGATTATT...ACTGGATTTCAGCACGGCGTTAGTGGTTTGTCCTCTTAATACTGCTTTGAATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR TCA 90 bp ATGAACATAGCTAAGGGAAGGCTACAAAATATTCAGCTCATTTGGAGGCCAGGTGGTTTCATCAGAATCTaGGGCTATAAATTCATCCAT +
Preference number: 4 (lower is better)
Translates to: MNIAKGRLQNIQLIWRPGGFIRI*GYKFIH
Trigger: ATGGATGAATTTATAGCCTCAGATTCTGATGAAACC...ACCTGGCCTCCAAATGAGCTGAATATTTTGTAGCCTTCCCTTAGCTATGTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373344.11
CDS-3UTR TCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACACCTCCCCGAGATCTTaGATTCCAGACCTTAATCAC +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNTSPRS*IPDLNH
Trigger: GTGATTAAGGTCTGGAATTCAAGATCTCGGGGAGGT...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR TCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAAAACTCGAAAAGACAGTaGCTGCTTAGTTACTTGCCG +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKNSKRQ*LLSYLP
Trigger: CGGCAAGTAACTAAGCAGTCACTGTCTTTTCGAGTT...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR TCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACCTGTACTTGGGCCTCTaGGAGATTCATGTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNLYLGL*EIHVLL
Trigger: AAGGAGAACATGAATCTCTCAGAGGCCCAAGTACAG...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR TCA 90 bp ATGAACATAGCTAAGGGAAGGCTACAAAATATTCAGCTCATTTGGAGGCCAGGTTTCATAAGTATTCGCTaGACACAGCTGATTAACATC +
Preference number: 4 (lower is better)
Translates to: MNIAKGRLQNIQLIWRPGFISIR*TQLINI
Trigger: GATGTTAATCAGCTGTGTTCAGCGAATACTTATGAA...ACCTGGCCTCCAAATGAGCTGAATATTTTGTAGCCTTCCCTTAGCTATGTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373344.11
CDS-3UTR TCA 90 bp ACTTTATCCCCAATTTCCTCTGCCATTCGAAGAATTTCAAAGAGAAGTACCATTCAGCTCACAATCCCATaGAGCCCATCTTTAAGTATC +
Preference number: 4 (lower is better)
Translates to: TLSPISSAIRRISKRSTIQLTIP*SPSLSI
Trigger: GATACTTAAAGATGGGCTTCATGGGATTGTGAGCTG...AATGGTACTTCTCTTTGAAATTCTTCGAATGGCAGAGGAAATTGGGGATAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR GCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACGTTGTCCACAAGCAGTaGAGCTCACAATCCCATGAA +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNVVHKQ*SSQSHE
Trigger: TTCATGGGATTGTGAGCTGCACTGCTTGTGGACAAC...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR GCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACGTTCAGTTCCACTGCTaGCATCCCCTTGATGATCAA +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNVQFHC*HPLDDQ
Trigger: TTGATCATCAAGGGGATGGCAGCAGTGGAACTGAAC...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR GCA 90 bp CCACATAAACTGAACACCATCTACTTGATGGGGTTTCAATTTGATAACCATATTGTTCAGTTCCACTGCTaGCATCCCCTTGATGATCAA +
Preference number: 4 (lower is better)
Translates to: PHKLNTIYLMGFQFDNHIVQFHC*HPLDDQ
Trigger: TTGATCATCAAGGGGATGGCAGCAGTGGAACTGAAC...AATATGGTTATCAAATTGAAACCCCATCAAGTAGATGGTGTTCAGTTTATGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR GCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACCTTGTTCAGTTCCACTaGTGCCATCCCCTTGATGAT +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNLVQFH*CHPLDD
Trigger: ATCATCAAGGGGATGGCAGCAGTGGAACTGAACAAG...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR GCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAAGAAGCACTTGCTTGCTaGTTCTTAGGAAGTCGATCT +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKEALAC*FLGSRS
Trigger: AGATCGACTTCCTAAGAAGCAGCAAGCAAGTGCTTC...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR GCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAAATCAGTGGAAGCACTTaGTTGCTGCTTCTTAGGAAG +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKISGST*LLLLRK
Trigger: CTTCCTAAGAAGCAGCAAGCAAGTGCTTCCACTGAT...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR GCA 90 bp ATGAACATAGCTAAGGGAAGGCTACAAAATATTCAGCTCATTTGGAGGCCAGGTGATGTAATGTCAGCTTaGTTCCTTTTAGTGCTTGTT +
Preference number: 4 (lower is better)
Translates to: MNIAKGRLQNIQLIWRPGDVMSA*FLLVLV
Trigger: AACAAGCACTAAAAGGAAGCAAGCTGACATTACATC...ACCTGGCCTCCAAATGAGCTGAATATTTTGTAGCCTTCCCTTAGCTATGTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373344.11
CDS-3UTR GCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAACTCACAGTCAATTTGTaGCGCAAAAGCCTATGTCTG +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKLTVNL*RKSLCL
Trigger: CAGACATAGGCTTTTGCGGCACAAATTGACTGTGAG...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR GCA 90 bp ATGAACATAGCTAAGGGAAGGCTACAAAATATTCAGCTCATTTGGAGGCCAGGTATCCCCAATTTCCTCTaGCATTCGAAGAATTTCAAA +
Preference number: 4 (lower is better)
Translates to: MNIAKGRLQNIQLIWRPGIPNFL*HSKNFK
Trigger: TTTGAAATTCTTCGAATGGCAGAGGAAATTGGGGAT...ACCTGGCCTCCAAATGAGCTGAATATTTTGTAGCCTTCCCTTAGCTATGTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373344.11
CDS-3UTR GCA 90 bp CAGTGTTGCTTGTTGATAAGTCATTTGTTGCTGTTGCTGCTGATTGTACTGCTGATCCCCAATTTCCTCTaGCATTCGAAGAATTTCAAA +
Preference number: 4 (lower is better)
Translates to: QCCLLISHLLLLLLIVLLIPNFL*HSKNFK
Trigger: TTTGAAATTCTTCGAATGGCAGAGGAAATTGGGGAT...CAGCAGTACAATCAGCAGCAACAGCAACAAATGACTTATCAACAAGCAACACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR GCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAAAGGTTGAATCCTCACTaGTGTCACACTGTTTGTTGC +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKRLNPH*CHTVCC
Trigger: GCAACAAACAGTGTGACAGCAGTGAGGATTCAACCT...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR GCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACAAGGTCCTGGATTTTTaGTTCTCATTGGGGGTGGTG +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNKVLDF*FSLGVV
Trigger: CACCACCCCCAATGAGAAGCAAAAATCCAGGACCTT...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR GCA 90 bp ATCTCTCTTTTTGTTTCTTCTCAACAGGCCTTAATAAATAGGACCACCATATTGCTGGTTTTTACAACCTaGTTGCTGTTCCGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: ISLFVSSQQALINRTTILLVFTT*LLFRCC
Trigger: GCAGCAACGGAACAGCAAGCAGGTTGTAAAAACCAG...CAATATGGTGGTCCTATTTATTAAGGCCTGTTGAGAAGAAACAAAAAGAGAGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000493470.2
CDS-3UTR CCA 90 bp ATGAACATAGCTAAGGGAAGGCTACAAAATATTCAGCTCATTTGGAGGCCAGGTAATCACTGTACCTTTTaGCAAGCTCTGCATAGTAAT +
Preference number: 4 (lower is better)
Translates to: MNIAKGRLQNIQLIWRPGNHCTF*QALHSN
Trigger: ATTACTATGCAGAGCTTGCCAAAAGGTACAGTGATT...ACCTGGCCTCCAAATGAGCTGAATATTTTGTAGCCTTCCCTTAGCTATGTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373344.11
CDS-3UTR CCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACATTCAGCACTGGCTCTaGCTGTACAATCACTGTACC +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNIQHWL*LYNHCT
Trigger: GGTACAGTGATTGTACAGCCAGAGCCAGTGCTGAAT...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373344.11
ENST00000480283.5
CDS-3UTR CCA 90 bp AAGGCTCTGGGTGACAAATGTAGCAATACCATTGGTTGTTTTCATCCATTATTGAACTGGAGTTCATGTTaGCTGTGGTCTCAATCAGTT +
Preference number: 4 (lower is better)
Translates to: KALGDKCSNTIGCFHPLLNWSSC*LWSQSV
Trigger: AACTGATTGAGACCACAGCCAACATGAACTCCAGTT...CAATAATGGATGAAAACAACCAATGGTATTGCTACATTTGTCACCCAGAGCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR CCA 90 bp CAGTGTTGCTTGTTGATAAGTCATTTGTTGCTGTTGCTGCTGATTGTACTGCTGATCAGCACCTTTAATTaGGGAATTAGAAAGGGAAAC +
Preference number: 4 (lower is better)
Translates to: QCCLLISHLLLLLLIVLLISTFN*GIRKGN
Trigger: GTTTCCCTTTCTAATTCCCCAATTAAAGGTGCTGAT...CAGCAGTACAATCAGCAGCAACAGCAACAAATGACTTATCAACAAGCAACACTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR CCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACTATCGACACCATCAGTaGAAGCACTTGCTTGCTGCT +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNYRHHQ*KHLLAA
Trigger: AGCAGCAAGCAAGTGCTTCCACTGATGGTGTCGATA...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR CCA 90 bp ATGAACATAGCTAAGGGAAGGCTACAAAATATTCAGCTCATTTGGAGGCCAGGTTCATCTCCTGAAGATTaGCAAAATCCAGTATGTGAA +
Preference number: 4 (lower is better)
Translates to: MNIAKGRLQNIQLIWRPGSSPED*QNPVCE
Trigger: TTCACATACTGGATTTTGCCAATCTTCAGGAGATGA...ACCTGGCCTCCAAATGAGCTGAATATTTTGTAGCCTTCCCTTAGCTATGTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373344.11
CDS-3UTR CCA 90 bp CATGCACTATACCATGCTGTCTTCTTGTTGAAGATTATGAGCATGGGGTATGCTTCATCTCCTGAAGATTaGCAAAATCCAGTATGTGAA +
Preference number: 4 (lower is better)
Translates to: HALYHAVFLLKIMSMGYASSPED*QNPVCE
Trigger: TTCACATACTGGATTTTGCCAATCTTCAGGAGATGA...AGCATACCCCATGCTCATAATCTTCAACAAGAAGACAGCATGGTATAGTGCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493470.2
CDS-3UTR CCA 90 bp CAGTGTTGCTTGTTGATAAGTCATTTGTTGCTGTTGCTGCTGATTGTACTGCTGTTATTGGACACTTGGTaGGTGAAGCATCTTCAATTT +
Preference number: 4 (lower is better)
Translates to: QCCLLISHLLLLLLIVLLLLDTW*VKHLQF
Trigger: AAATTGAAGATGCTTCACCCACCAAGTGTCCAATAA...CAGCAGTACAATCAGCAGCAACAGCAACAAATGACTTATCAACAAGCAACACTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR CCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACATCTTTGTACCAGTCTaGAGCTGGGCTGCTTGGATT +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNIFVPV*SWAAWI
Trigger: AATCCAAGCAGCCCAGCTCCAGACTGGTACAAAGAT...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR CCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAATATCCTTTGGCAGCATaGGAGTATCCCTCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKYPLAA*EYPSSS
Trigger: AGAAGAAGAGGGATACTCCCATGCTGCCAAAGGATA...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR CCA 90 bp ACTTTATCCCCAATTTCCTCTGCCATTCGAAGAATTTCAAAGAGAAGTACCATTTATCCTTTGGCAGCATaGGAGTATCCCTCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: TLSPISSAIRRISKRSTIYPLAA*EYPSSS
Trigger: AGAAGAAGAGGGATACTCCCATGCTGCCAAAGGATA...AATGGTACTTCTCTTTGAAATTCTTCGAATGGCAGAGGAAATTGGGGATAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR CCA 90 bp ACTTTATCCCCAATTTCCTCTGCCATTCGAAGAATTTCAAAGAGAAGTACCATTCATCAAGCTCCTGGCTaGCTTGTCTACTTAATGCTA +
Preference number: 4 (lower is better)
Translates to: TLSPISSAIRRISKRSTIHQAPG*LVYLML
Trigger: TAGCATTAAGTAGACAAGCCAGCCAGGAGCTTGATG...AATGGTACTTCTCTTTGAAATTCTTCGAATGGCAGAGGAAATTGGGGATAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR CCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACCATACCACCAGCCACTaGCTGATACATTCCTCTCAT +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNHTTSH*LIHSSH
Trigger: ATGAGAGGAATGTATCAGCCAGTGGCTGGTGGTATG...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR CCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACCCCTTGGGAAGGTCCTaGATTTTTGCTTCTCATTGG +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNPLGRS*IFASHW
Trigger: CCAATGAGAAGCAAAAATCCAGGACCTTCCCAAGGG...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR CCA 90 bp ATGAACATAGCTAAGGGAAGGCTACAAAATATTCAGCTCATTTGGAGGCCAGGTACTAATATGGAAGATTaGCATTTAAGGGGACCAAAC +
Preference number: 4 (lower is better)
Translates to: MNIAKGRLQNIQLIWRPGTNMED*HLRGPN
Trigger: GTTTGGTCCCCTTAAATGCCAATCTTCCATATTAGT...ACCTGGCCTCCAAATGAGCTGAATATTTTGTAGCCTTCCCTTAGCTATGTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373344.11
CDS-3UTR CCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACAGTGATATTTCATCATaGGAAAGTGGGGGAGAGGGG +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNSDISS*ESGGEG
Trigger: CCCCTCTCCCCCACTTTCCCATGATGAAATATCACT...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
3UTR CAA 72 bp AACTCCTTTCGACCAAGGTTGCGTAGAATGCATTTCTaGCAGAAAGCATTATGGCAAAAGTCACAACAAATC +
Preference number: 4 (lower is better)
Translates to: NSFRPRLRRMHF*QKALWQKSQQI
Trigger: GATTTGTTGTGACTTTTGCCATAATGCTTTCTGCAAGAAATGCATTCTACGCAACCTTGGTCGAAAGGAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR CAA 72 bp TCTTCATCTAAAACCAACTTGGTTGTTATTGGACACTaGGTGGGTGAAGCATCTTCAATTTCTATCACGCCT +
Preference number: 4 (lower is better)
Translates to: SSSKTNLVVIGH*VGEASSISITP
Trigger: AGGCGTGATAGAAATTGAAGATGCTTCACCCACCAAGTGTCCAATAACAACCAAGTTGGTTTTAGATGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623242.3
CDS-3UTR TCA 90 bp AAAATCTTCAATCAAGTCCAGAGATATGAGGGACTGGCTGAAAACAAGGACTTTCTTTTTGAAAATGATTaGCCTGTTGTCCACAAGCAG +
Preference number: 4 (lower is better)
Translates to: KIFNQVQRYEGLAENKDFLFEND*PVVHKQ
Trigger: CTGCTTGTGGACAACAGGTCAATCATTTTCAAAAAG...AAAGTCCTTGTTTTCAGCCAGTCCCTCATATCTCTGGACTTGATTGAAGATTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR TCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAATTCATCCATTCCATCTaGGTCACGGCTAATATCATC +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKFIHSI*VTANII
Trigger: GATGATATTAGCCGTGACTCAGATGGAATGGATGAA...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR TCA 90 bp AACAAGGACTTTATCCCCAATTTCCTCTGCCATTCGAAGAATTTCAAAGAGAAGAGCAGAACTGATTTCTaGATTATCTGTTGCCTGCTT +
Preference number: 4 (lower is better)
Translates to: NKDFIPNFLCHSKNFKEKSRTDF*IICCLL
Trigger: AAGCAGGCAACAGATAATTCAGAAATCAGTTCTGCT...CTTCTCTTTGAAATTCTTCGAATGGCAGAGGAAATTGGGGATAAAGTCCTTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR TCA 90 bp AACAAGGACTTTATCCCCAATTTCCTCTGCCATTCGAAGAATTTCAAAGAGAAGTCTTGTGGAACTTCCTaGCAATCAGCACCTTTAATT +
Preference number: 4 (lower is better)
Translates to: NKDFIPNFLCHSKNFKEKSCGTS*QSAPLI
Trigger: AATTAAAGGTGCTGATTGTCAGGAAGTTCCACAAGA...CTTCTCTTTGAAATTCTTCGAATGGCAGAGGAAATTGGGGATAAAGTCCTTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR TCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACTTCTGGCTCATCATCTaGAGATCCATCCTCATCAGA +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNFWLII*RSILIR
Trigger: TCTGATGAGGATGGATCTTCAGATGATGAGCCAGAA...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR TCA 90 bp AGAAAATCTTCAATCAAGTCCAGAGATATGAGGGACTGGCTGAAAACAAGGACTCTAACTCCTGATTCCTaGAAATCAGAATCTTCTGAA +
Preference number: 4 (lower is better)
Translates to: RKSSIKSRDMRDWLKTRTLTPDS*KSESSE
Trigger: TTCAGAAGATTCTGATTTTCAGGAATCAGGAGTTAG...AGTCCTTGTTTTCAGCCAGTCCCTCATATCTCTGGACTTGATTGAAGATTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR TCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAACTGGATGAATCTTCTTaGACCTTAATACGTCGCCTT +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKLDESS*TLIRRL
Trigger: AAGGCGACGTATTAAGGTTCAAGAAGATTCATCCAG...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR TCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAATGGACACTTGGTGGGTaGAGCATCTTCAATTTCTAT +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKWTLGG*SIFNFY
Trigger: ATAGAAATTGAAGATGCTTCACCCACCAAGTGTCCA...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR TCA 90 bp CCACATAAACTGAACACCATCTACTTGATGGGGTTTCAATTTGATAACCATATTGGCAAGAATGCATCCTaGACCTGGAGATTTCTTTGT +
Preference number: 4 (lower is better)
Translates to: PHKLNTIYLMGFQFDNHIGKNAS*TWRFLC
Trigger: ACAAAGAAATCTCCAGGTTCAGGATGCATTCTTGCC...AATATGGTTATCAAATTGAAACCCCATCAAGTAGATGGTGTTCAGTTTATGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480283.5
ENST00000623242.3
CDS-3UTR TCA 90 bp AGAAAATCTTCAATCAAGTCCAGAGATATGAGGGACTGGCTGAAAACAAGGACTTTCACATTCCTTCCTTaGGCAAGATTTCTATACATC +
Preference number: 4 (lower is better)
Translates to: RKSSIKSRDMRDWLKTRTFTFLP*ARFLYI
Trigger: GATGTATAGAAATCTTGCTCAAGGAAGGAATGTGAA...AGTCCTTGTTTTCAGCCAGTCCCTCATATCTCTGGACTTGATTGAAGATTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR TCA 90 bp AACAAGGACTTTATCCCCAATTTCCTCTGCCATTCGAAGAATTTCAAAGAGAAGTGCAAACACCAAGGATaGGTCCATATTCTACTTAAC +
Preference number: 4 (lower is better)
Translates to: NKDFIPNFLCHSKNFKEKCKHQG*VHILLN
Trigger: GTTAAGTAGAATATGGACTCATCCTTGGTGTTTGCA...CTTCTCTTTGAAATTCTTCGAATGGCAGAGGAAATTGGGGATAAAGTCCTTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480283.5
ENST00000623316.1
CDS-3UTR TCA 90 bp AAGGCTCTGGGTGACAAATGTAGCAATACCATTGGTTGTTTTCATCCATTATTGTGTTCTTTATGTATCTaGAGGAGCTCTGCAAGTATG +
Preference number: 4 (lower is better)
Translates to: KALGDKCSNTIGCFHPLLCSLCI*RSSASM
Trigger: CATACTTGCAGAGCTCCTTCAGATACATAAAGAACA...CAATAATGGATGAAAACAACCAATGGTATTGCTACATTTGTCACCCAGAGCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR TCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAAACTTTTTCTCTTCCTTaGTTAATGAGGTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKTFSLP*LMRSSS
Trigger: GCTGGAGGACCTCATTAATCAAGGAAGAGAAAAAGT...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR TCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACATATCCTCAAGAGGTTaGATCCTCACTGCTGTCACA +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNISSRG*ILTAVT
Trigger: TGTGACAGCAGTGAGGATTCAACCTCTTGAGGATAT...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR TCA 90 bp ACTTTATCCCCAATTTCCTCTGCCATTCGAAGAATTTCAAAGAGAAGTACCATTCTCCTTCCATACAGCTaGAATTATATCCTCAAGAGG +
Preference number: 4 (lower is better)
Translates to: TLSPISSAIRRISKRSTILLPYS*NYILKR
Trigger: CCTCTTGAGGATATAATTTCAGCTGTATGGAAGGAG...AATGGTACTTCTCTTTGAAATTCTTCGAATGGCAGAGGAAATTGGGGATAAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR TCA 90 bp AAGGCTCTGGGTGACAAATGTAGCAATACCATTGGTTGTTTTCATCCATTATTGTTCGCTGAACACAGCTaGTTAACATCTGTTGTTTTG +
Preference number: 4 (lower is better)
Translates to: KALGDKCSNTIGCFHPLLFAEHS*LTSVVL
Trigger: CAAAACAACAGATGTTAATCAGCTGTGTTCAGCGAA...CAATAATGGATGAAAACAACCAATGGTATTGCTACATTTGTCACCCAGAGCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR TCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACAGTGCAAAATCACATTaGTTTCCCTTGGGAAGGTCC +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNSAKSH*FPLGRS
Trigger: GGACCTTCCCAAGGGAAATCAATGTGATTTTGCACT...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR TCA 90 bp GACTTTATCCCCAATTTCCTCTGCCATTCGAAGAATTTCAAAGAGAAGTACCATTCTAGGCAACATCACTaGCAAATGTCAGGAAGAAAT +
Preference number: 4 (lower is better)
Translates to: DFIPNFLCHSKNFKEKYHSRQHH*QMSGRN
Trigger: ATTTCTTCCTGACATTTGTCAGTGATGTTGCCTAGA...ATGGTACTTCTCTTTGAAATTCTTCGAATGGCAGAGGAAATTGGGGATAAAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR TCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAAGTTGGTAGCCCTGCTTaGCTTAAAATGAGTGTTACA +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKVGSPA*LKMSVT
Trigger: TGTAACACTCATTTTAAGTCAAGCAGGGCTACCAAC...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373344.11
CDS-3UTR GCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAACCAATGTATTCAACTTaGTTTCACTCATGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKPMYST*FHSWAQ
Trigger: CTGAGCCCATGAGTGAAAGCAAGTTGAATACATTGG...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR GCA 90 bp ATGAACATAGCTAAGGGAAGGCTACAAAATATTCAGCTCATTTGGAGGCCAGGTCCTTTTGGCAAGCTCTaGATAGTAATATCATTTTCT +
Preference number: 4 (lower is better)
Translates to: MNIAKGRLQNIQLIWRPGPFGKL*IVISFS
Trigger: AGAAAATGATATTACTATGCAGAGCTTGCCAAAAGG...ACCTGGCCTCCAAATGAGCTGAATATTTTGTAGCCTTCCCTTAGCTATGTTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373344.11
CDS-3UTR GCA 90 bp ATGAACATAGCTAAGGGAAGGCTACAAAATATTCAGCTCATTTGGAGGCCAGGTGTAGAATGCATTTCTTaGAGAAAGCATTATGGCAAA +
Preference number: 4 (lower is better)
Translates to: MNIAKGRLQNIQLIWRPGVECIS*RKHYGK
Trigger: TTTGCCATAATGCTTTCTGCAAGAAATGCATTCTAC...ACCTGGCCTCCAAATGAGCTGAATATTTTGTAGCCTTCCCTTAGCTATGTTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373344.11
CDS-3UTR GCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACCCTTTCGACCAAGGTTaGGTAGAATGCATTTCTTGC +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNPFDQG*VECISC
Trigger: GCAAGAAATGCATTCTACGCAACCTTGGTCGAAAGG...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR GCA 90 bp ATGAACATAGCTAAGGGAAGGCTACAAAATATTCAGCTCATTTGGAGGCCAGGTTCCACAGTCTCTGATTaGTTAGATTTTGGCAATTTA +
Preference number: 4 (lower is better)
Translates to: MNIAKGRLQNIQLIWRPGSTVSD*LDFGNL
Trigger: TAAATTGCCAAAATCTAAGCAATCAGAGACTGTGGA...ACCTGGCCTCCAAATGAGCTGAATATTTTGTAGCCTTCCCTTAGCTATGTTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373344.11
CDS-3UTR GCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACATCAGTGGAAGCACTTaGTTGCTGCTTCTTAGGAAG +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNISGST*LLLLRK
Trigger: CTTCCTAAGAAGCAGCAAGCAAGTGCTTCCACTGAT...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR GCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACTACAGTGGGCAAGAATaGATCCTGAACCTGGAGATT +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNYSGQE*ILNLEI
Trigger: AATCTCCAGGTTCAGGATGCATTCTTGCCCACTGTA...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR GCA 90 bp AACAAGGACTTTATCCCCAATTTCCTCTGCCATTCGAAGAATTTCAAAGAGAAGACCATTTTCCCAGAATaGTCTAAAACCTCAGCATCA +
Preference number: 4 (lower is better)
Translates to: NKDFIPNFLCHSKNFKEKTIFPE*SKTSAS
Trigger: TGATGCTGAGGTTTTAGAGCATTCTGGGAAAATGGT...CTTCTCTTTGAAATTCTTCGAATGGCAGAGGAAATTGGGGATAAAGTCCTTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000480283.5
ENST00000623316.1
CDS-3UTR GCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAACGAAAAGACAGTGACTaGTTAGTTACTTGCCGATCA +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKRKDSD*LVTCRS
Trigger: TGATCGGCAAGTAACTAAGCAGTCACTGTCTTTTCG...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR GCA 90 bp TATTTAATTTTACAGATGAACTCTCCACTTCTTGTTCAGTTCCACTGCTGCCATCGAAAAGACAGTGACTaGTTAGTTACTTGCCGATCA +
Preference number: 4 (lower is better)
Translates to: YLILQMNSPLLVQFHCCHRKDSD*LVTCRS
Trigger: TGATCGGCAAGTAACTAAGCAGTCACTGTCTTTTCG...ATGGCAGCAGTGGAACTGAACAAGAAGTGGAGAGTTCATCTGTAAAATTAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR GCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACAGGTTGAATCCTCACTaGTGTCACACTGTTTGTTGC +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNRLNPH*CHTVCC
Trigger: GCAACAAACAGTGTGACAGCAGTGAGGATTCAACCT...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR GCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAAGAGGTGACCCAGTGTTaGTTGTTGATAAGTCATTTG +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKEVTQC*LLISHL
Trigger: CAAATGACTTATCAACAAGCAACACTGGGTCACCTC...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR GCA 90 bp ATCTCTCTTTTTGTTTCTTCTCAACAGGCCTTAATAAATAGGACCACCATATTGCCTTTCTTTCAAACTTaGAGGAAGACTGTGAGCGAG +
Preference number: 4 (lower is better)
Translates to: ISLFVSSQQALINRTTILPFFQT*RKTVSE
Trigger: CTCGCTCACAGTCTTCCTGCAAGTTTGAAAGAAAGG...CAATATGGTGGTCCTATTTATTAAGGCCTGTTGAGAAGAAACAAAAAGAGAGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493470.2
CDS-3UTR GCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAACTCTGCTACAACTCCTaGCATTTAGAAATGCAGCAA +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKLCYNS*HLEMQQ
Trigger: TTGCTGCATTTCTAAATGGCAGGAGTTGTAGCAGAG...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675732.1
CDS-3UTR CCA 90 bp AAAATCTTCAATCAAGTCCAGAGATATGAGGGACTGGCTGAAAACAAGGACTTTATTCATTGCAAGTCGTaGAGGAGAACTTGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: KIFNQVQRYEGLAENKDFIHCKS*RRTCFF
Trigger: GAAGAAACAAGTTCTCCTCCACGACTTGCAATGAAT...AAAGTCCTTGTTTTCAGCCAGTCCCTCATATCTCTGGACTTGATTGAAGATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR CCA 90 bp ATGAACATAGCTAAGGGAAGGCTACAAAATATTCAGCTCATTTGGAGGCCAGGTTTGCAGAAAGCATTATaGCAAAAGTCACAACAAATC +
Preference number: 4 (lower is better)
Translates to: MNIAKGRLQNIQLIWRPGLQKAL*QKSQQI
Trigger: GATTTGTTGTGACTTTTGCCATAATGCTTTCTGCAA...ACCTGGCCTCCAAATGAGCTGAATATTTTGTAGCCTTCCCTTAGCTATGTTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373344.11
CDS-3UTR CCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAAGTCCAACAAAGGCTCTaGGTGACAAATGTAGCAATA +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKVQQRL*VTNVAI
Trigger: TATTGCTACATTTGTCACCCAGAGCCTTTGTTGGAC...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR CCA 90 bp AACAAGGACTTTATCCCCAATTTCCTCTGCCATTCGAAGAATTTCAAAGAGAAGCACATTTCTCTAACTTaGGGTTCAGACCACAACTTT +
Preference number: 4 (lower is better)
Translates to: NKDFIPNFLCHSKNFKEKHISLT*GSDHNF
Trigger: AAAGTTGTGGTCTGAACCCCAAGTTAGAGAAATGTG...CTTCTCTTTGAAATTCTTCGAATGGCAGAGGAAATTGGGGATAAAGTCCTTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR CCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAATGTAGTCTTTACACGTaGGGATCTTCGAAGATCAGA +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKCSLYT*GSSKIR
Trigger: TCTGATCTTCGAAGATCCCCACGTGTAAAGACTACA...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR CCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAACGGAGCTTAAACTCATaGAGGTTTCATCAGAATCTG +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKRSLNS*RFHQNL
Trigger: CAGATTCTGATGAAACCTCCATGAGTTTAAGCTCCG...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR CCA 90 bp AGCTGCTTTTCTTTCTTCTTCAGTCAACTCTTCTTCTTCTTTGTGGTCCAAAAGAGAGATATGAGGGACTaGCTGAAAACAAGGACTTTA +
Preference number: 4 (lower is better)
Translates to: SCFSFFFSQLFFFFVVQKRDMRD*LKTRTL
Trigger: TAAAGTCCTTGTTTTCAGCCAGTCCCTCATATCTCT...CTTTTGGACCACAAAGAAGAAGAAGAGTTGACTGAAGAAGAAAGAAAAGCAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR CCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAACTGGATGTCATAAGATaGATTCCAAGAAGCGTCGAA +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKLDVIR*IPRSVE
Trigger: TTCGACGCTTCTTGGAATCCATCTTATGACATCCAG...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR CCA 90 bp ACTTTATCCCCAATTTCCTCTGCCATTCGAAGAATTTCAAAGAGAAGTACCATTCTGGATGTCATAAGATaGATTCCAAGAAGCGTCGAA +
Preference number: 4 (lower is better)
Translates to: TLSPISSAIRRISKRSTILDVIR*IPRSVE
Trigger: TTCGACGCTTCTTGGAATCCATCTTATGACATCCAG...AATGGTACTTCTCTTTGAAATTCTTCGAATGGCAGAGGAAATTGGGGATAAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR CCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACTATCCTTTGGCAGCATaGGAGTATCCCTCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNYPLAA*EYPSSS
Trigger: AGAAGAAGAGGGATACTCCCATGCTGCCAAAGGATA...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR CCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACAAGTATGGTATCCTTTaGCAGCATGGGAGTATCCCT +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNKYGIL*QHGSIP
Trigger: AGGGATACTCCCATGCTGCCAAAGGATACCATACTT...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR CCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACCATCAAGCTCCTGGCTaGCTTGTCTACTTAATGCTA +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNHQAPG*LVYLML
Trigger: TAGCATTAAGTAGACAAGCCAGCCAGGAGCTTGATG...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR CCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAACACATTGATTTCCCTTaGGAAGGTCCTGGATTTTTG +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKHIDFP*EGPGFL
Trigger: CAAAAATCCAGGACCTTCCCAAGGGAAATCAATGTG...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR CCA 90 bp ATGAACATAGCTAAGGGAAGGCTACAAAATATTCAGCTCATTTGGAGGCCAGGTGAGTTGTTACTATTATaGAAGGACTTGTTTTCACTG +
Preference number: 4 (lower is better)
Translates to: MNIAKGRLQNIQLIWRPGELLLL*KDLFSL
Trigger: CAGTGAAAACAAGTCCTTCCATAATAGTAACAACTC...ACCTGGCCTCCAAATGAGCTGAATATTTTGTAGCCTTCCCTTAGCTATGTTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373344.11
CDS-3UTR CCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAAAACAGGAAATGGGGCTaGATTACACAAAGACATCCA +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKNRKWG*ITQRHP
Trigger: TGGATGTCTTTGTGTAATCCAGCCCCATTTCCTGTT...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373344.11
3UTR CAA 72 bp GGGCTACTGGGACAGAATGTAACTGCTCTTAAAGTTTaGTTTGGGGCACATAAATATCGATCTGATTTTATG +
Preference number: 4 (lower is better)
Translates to: GLLGQNVTALKV*FGAHKYRSDFM
Trigger: CATAAAATCAGATCGATATTTATGTGCCCCAAACAAAACTTTAAGAGCAGTTACATTCTGTCCCAGTAGCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373344.11
3UTR CAA 72 bp ATTCCAAAATTCCATGCACTATACCATGCTGTCTTCTaGTTGAAGATTATGAGCATGGGGTATGCTATTGTC +
Preference number: 4 (lower is better)
Translates to: IPKFHALYHAVF*LKIMSMGYAIV
Trigger: GACAATAGCATACCCCATGCTCATAATCTTCAACAAGAAGACAGCATGGTATAGTGCATGGAATTTTGGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493470.2
3UTR CAA 72 bp TCTATAAATGGAATCTTTTTGAAAATGATTGACCTGTaGTCCACAAGCAGTGCAGCTCACAATCCCATGAAG +
Preference number: 4 (lower is better)
Translates to: SINGIFLKMIDL*STSSAAHNPMK
Trigger: CTTCATGGGATTGTGAGCTGCACTGCTTGTGGACAACAGGTCAATCATTTTCAAAAAGATTCCATTTATAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR CAA 72 bp AAATGTAGCAATACCATTGGTTGTTTTCATCCATTATaGTGGACAACTCCTTTCGACCAAGGTTGCGTAGAA +
Preference number: 4 (lower is better)
Translates to: KCSNTIGCFHPL*WTTPFDQGCVE
Trigger: TTCTACGCAACCTTGGTCGAAAGGAGTTGTCCACAATAATGGATGAAAACAACCAATGGTATTGCTACATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR CAA 72 bp TCTTCATCTAAAACCAACTTGGTTGTTATTGGACACTaGGTGGGTGAAGCATCTTCAATTTCTATCACCTCT +
Preference number: 4 (lower is better)
Translates to: SSSKTNLVVIGH*VGEASSISITS
Trigger: AGAGGTGATAGAAATTGAAGATGCTTCACCCACCAAGTGTCCAATAACAACCAAGTTGGTTTTAGATGAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
3UTR CAA 72 bp GATCTTGAATTCCAGACCTTAATCACTTCAACATCATaGTCACTGCCACTTCCACTTGAGCTACTATCTTTT +
Preference number: 4 (lower is better)
Translates to: DLEFQTLITSTS*SLPLPLELLSF
Trigger: AAAAGATAGTAGCTCAAGTGGAAGTGGCAGTGACAATGATGTTGAAGTGATTAAGGTCTGGAATTCAAGATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR TCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAACTTTTTGAAAATGATTaGCCTGTTGTCCACAAGCAG +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKLFEND*PVVHKQ
Trigger: CTGCTTGTGGACAACAGGTCAATCATTTTCAAAAAG...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR TCA 90 bp CCACATAAACTGAACACCATCTACTTGATGGGGTTTCAATTTGATAACCATATTTTCATCCATTCCATCTaGGTCACGGCTAATATCATC +
Preference number: 4 (lower is better)
Translates to: PHKLNTIYLMGFQFDNHIFIHSI*VTANII
Trigger: GATGATATTAGCCGTGACTCAGATGGAATGGATGAA...AATATGGTTATCAAATTGAAACCCCATCAAGTAGATGGTGTTCAGTTTATGTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR TCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAAAGCAGAACTGATTTCTaGATTATCTGTTGCCTGCTT +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKSRTDF*IICCLL
Trigger: AAGCAGGCAACAGATAATTCAGAAATCAGTTCTGCT...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR TCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACTCTTCCAATGCAAGATaGGCCTTCTTAATATCAGCC +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNSSNAR*AFLISA
Trigger: GGCTGATATTAAGAAGGCTCATCTTGCATTGGAAGA...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR TCA 90 bp ACTTTATCCCCAATTTCCTCTGCCATTCGAAGAATTTCAAAGAGAAGTACCATTTCAGAATCTGAATTTTaGTCCACAGTCTCTGATTGC +
Preference number: 4 (lower is better)
Translates to: TLSPISSAIRRISKRSTISESEF*STVSDC
Trigger: GCAATCAGAGACTGTGGATCAAAATTCAGATTCTGA...AATGGTACTTCTCTTTGAAATTCTTCGAATGGCAGAGGAAATTGGGGATAAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR TCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAATCATCTTTCCCCGCCTaGGTCTTTAAATCATACAAA +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKSSFPA*VFKSYK
Trigger: TTTGTATGATTTAAAGACTCAGGCGGGGAAAGATGA...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR TCA 90 bp GTATTTTTCTCTTTGTTTACAGCATCCATCGCTCGAAACTCGGAATTTAAGTCTTCATCTTTCCCCGCCTaGGTCTTTAAATCATACAAA +
Preference number: 4 (lower is better)
Translates to: VFFSLFTASIARNSEFKSSSFPA*VFKSYK
Trigger: TTTGTATGATTTAAAGACTCAGGCGGGGAAAGATGA...AGACTTAAATTCCGAGTTTCGAGCGATGGATGCTGTAAACAAAGAGAAAAATAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR TCA 90 bp AAAATCTTCAATCAAGTCCAGAGATATGAGGGACTGGCTGAAAACAAGGACTTTTATAGAGCTCTTAGCTaGTTTGCCCTTTTTAGTATC +
Preference number: 4 (lower is better)
Translates to: KIFNQVQRYEGLAENKDFYRALS*FALFSI
Trigger: GATACTAAAAAGGGCAAATCAGCTAAGAGCTCTATA...AAAGTCCTTGTTTTCAGCCAGTCCCTCATATCTCTGGACTTGATTGAAGATTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR TCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAATTCAGTGCCATCAGATaGAGATTCATACTGTTGTTC +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKFSAIR*RFILLF
Trigger: GAACAACAGTATGAATCTTCATCTGATGGCACTGAA...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR TCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAAATGCCCTTAGGAAAATaGCAAATTTCTTCTCGCTCA +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKMPLGK*QISSRS
Trigger: TGAGCGAGAAGAAATTTGTCATTTTCCTAAGGGCAT...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR TCA 90 bp AAGGCTCTGGGTGACAAATGTAGCAATACCATTGGTTGTTTTCATCCATTATTGAAAATCAGAATCTTCTaGATCTTCACTGCTCACCTT +
Preference number: 4 (lower is better)
Translates to: KALGDKCSNTIGCFHPLLKIRIF*IFTAHL
Trigger: AAGGTGAGCAGTGAAGATTCAGAAGATTCTGATTTT...CAATAATGGATGAAAACAACCAATGGTATTGCTACATTTGTCACCCAGAGCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR TCA 90 bp AAACCAACTTGGTTGTTATTGGACACTTGGTGGGTGAAGCATCTTCAATTTCTACACAAAAGAACTGTATaGAGAAAACTTACCACCTGT +
Preference number: 4 (lower is better)
Translates to: KPTWLLLDTWWVKHLQFLHKRTV*RKLTTC
Trigger: ACAGGTGGTAAGTTTTCTTCATACAGTTCTTTTGTG...TAGAAATTGAAGATGCTTCACCCACCAAGTGTCCAATAACAACCAAGTTGGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480283.5
ENST00000623242.3
CDS-3UTR TCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAATGCAAACACCAAGGATaGGTCCATATTCTACTTAAC +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKCKHQG*VHILLN
Trigger: GTTAAGTAGAATATGGACTCATCCTTGGTGTTTGCA...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR TCA 90 bp AAGGCTCTGGGTGACAAATGTAGCAATACCATTGGTTGTTTTCATCCATTATTGGGTTTCATCAGAATCTaGGGCTATAAATTCATCCAT +
Preference number: 4 (lower is better)
Translates to: KALGDKCSNTIGCFHPLLGFIRI*GYKFIH
Trigger: ATGGATGAATTTATAGCCTCAGATTCTGATGAAACC...CAATAATGGATGAAAACAACCAATGGTATTGCTACATTTGTCACCCAGAGCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR TCA 90 bp AACAAGGACTTTATCCCCAATTTCCTCTGCCATTCGAAGAATTTCAAAGAGAAGGGTTTCATCAGAATCTaGGGCTATAAATTCATCCAT +
Preference number: 4 (lower is better)
Translates to: NKDFIPNFLCHSKNFKEKGFIRI*GYKFIH
Trigger: ATGGATGAATTTATAGCCTCAGATTCTGATGAAACC...CTTCTCTTTGAAATTCTTCGAATGGCAGAGGAAATTGGGGATAAAGTCCTTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480283.5
ENST00000623316.1
CDS-3UTR TCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAATGTTCTTTATGTATCTaGAGGAGCTCTGCAAGTATG +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKCSLCI*RSSASM
Trigger: CATACTTGCAGAGCTCCTTCAGATACATAAAGAACA...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR TCA 90 bp CCACATAAACTGAACACCATCTACTTGATGGGGTTTCAATTTGATAACCATATTACTTTTTCTCTTCCTTaGTTAATGAGGTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: PHKLNTIYLMGFQFDNHITFSLP*LMRSSS
Trigger: GCTGGAGGACCTCATTAATCAAGGAAGAGAAAAAGT...AATATGGTTATCAAATTGAAACCCCATCAAGTAGATGGTGTTCAGTTTATGTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR TCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACCTCCTTCCATACAGCTaGAATTATATCCTCAAGAGG +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNLLPYS*NYILKR
Trigger: CCTCTTGAGGATATAATTTCAGCTGTATGGAAGGAG...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR TCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAATTCGCTGAACACAGCTaGTTAACATCTGTTGTTTTG +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKFAEHS*LTSVVL
Trigger: CAAAACAACAGATGTTAATCAGCTGTGTTCAGCGAA...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR TCA 90 bp AGCTGCTTTTCTTTCTTCTTCAGTCAACTCTTCTTCTTCTTTGTGGTCCAAAAGTTCATAAGTATTCGCTaGACACAGCTGATTAACATC +
Preference number: 4 (lower is better)
Translates to: SCFSFFFSQLFFFFVVQKFISIR*TQLINI
Trigger: GATGTTAATCAGCTGTGTTCAGCGAATACTTATGAA...CTTTTGGACCACAAAGAAGAAGAAGAGTTGACTGAAGAAGAAAGAAAAGCAGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR TCA 90 bp ATCTCTCTTTTTGTTTCTTCTCAACAGGCCTTAATAAATAGGACCACCATATTGCCTTTGAGTAACATCTaGGGCCTCATGATGTATAGA +
Preference number: 4 (lower is better)
Translates to: ISLFVSSQQALINRTTILPLSNI*GLMMYR
Trigger: TCTATACATCATGAGGCCTCAGATGTTACTCAAAGG...CAATATGGTGGTCCTATTTATTAAGGCCTGTTGAGAAGAAACAAAAAGAGAGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493470.2
CDS-3UTR TCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAACAAAGTTCAACTAGATaGTGTATCAGGCTCTTCCAA +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKQSSTR*CIRLFQ
Trigger: TTGGAAGAGCCTGATACATCATCTAGTTGAACTTTG...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675732.1
CDS-3UTR GCA 90 bp ACTTTATCCCCAATTTCCTCTGCCATTCGAAGAATTTCAAAGAGAAGTACCATTTGTGTTTTGATTCATTaGAAGTCGTGGAGGAGAACT +
Preference number: 4 (lower is better)
Translates to: TLSPISSAIRRISKRSTICVLIH*KSWRRT
Trigger: AGTTCTCCTCCACGACTTGCAATGAATCAAAACACA...AATGGTACTTCTCTTTGAAATTCTTCGAATGGCAGAGGAAATTGGGGATAAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR GCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAACAAGGTTGCGTAGAATaGATTTCTTGCAGAAAGCAT +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKQGCVE*ISCRKH
Trigger: ATGCTTTCTGCAAGAAATGCATTCTACGCAACCTTG...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR GCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAAAAATACGCTGTTACATaGAGTGACCAAGTCCAACAA +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKKYAVT*SDQVQQ
Trigger: TTGTTGGACTTGGTCACTGCATGTAACAGCGTATTT...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR GCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAATGTCTTTATCAACTGTaGCTTCTGCTGAAGAGAAAG +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKCLYQL*LLLKRK
Trigger: CTTTCTCTTCAGCAGAAGGCACAGTTGATAAAGACA...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR GCA 90 bp AGCTGCTTTTCTTTCTTCTTCAGTCAACTCTTCTTCTTCTTTGTGGTCCAAAAGCAGGTAACTTTTCAGTaGCATCAGATGAAGATTCAT +
Preference number: 4 (lower is better)
Translates to: SCFSFFFSQLFFFFVVQKQVTFQ*HQMKIH
Trigger: ATGAATCTTCATCTGATGGCACTGAAAAGTTACCTG...CTTTTGGACCACAAAGAAGAAGAAGAGTTGACTGAAGAAGAAAGAAAAGCAGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR GCA 90 bp AAGGCTCTGGGTGACAAATGTAGCAATACCATTGGTTGTTTTCATCCATTATTGGATGTAATGTCAGCTTaGTTCCTTTTAGTGCTTGTT +
Preference number: 4 (lower is better)
Translates to: KALGDKCSNTIGCFHPLLDVMSA*FLLVLV
Trigger: AACAAGCACTAAAAGGAAGCAAGCTGACATTACATC...CAATAATGGATGAAAACAACCAATGGTATTGCTACATTTGTCACCCAGAGCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR GCA 90 bp GAAATCAGATACCCTTATGCCCATTATTCCAAAATTCCATGCACTATACCATGCGATGTAATGTCAGCTTaGTTCCTTTTAGTGCTTGTT +
Preference number: 4 (lower is better)
Translates to: EIRYPYAHYSKIPCTIPCDVMSA*FLLVLV
Trigger: AACAAGCACTAAAAGGAAGCAAGCTGACATTACATC...GCATGGTATAGTGCATGGAATTTTGGAATAATGGGCATAAGGGTATCTGATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493470.2
CDS-3UTR GCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAACACCTTCACTATTATTaGCCACACCTGTTAAGTGAT +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKHLHYY*PHLLSD
Trigger: ATCACTTAACAGGTGTGGGCAATAATAGTGAAGGTG...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR GCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAAACCATTTTCCCAGAATaGTCTAAAACCTCAGCATCA +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKTIFPE*SKTSAS
Trigger: TGATGCTGAGGTTTTAGAGCATTCTGGGAAAATGGT...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR GCA 90 bp AAACAAGGACTTTATCCCCAATTTCCTCTGCCATTCGAAGAATTTCAAAGAGAAACCATTTTCCCAGAATaGTCTAAAACCTCAGCATCA +
Preference number: 4 (lower is better)
Translates to: KQGLYPQFPLPFEEFQRETIFPE*SKTSAS
Trigger: TGATGCTGAGGTTTTAGAGCATTCTGGGAAAATGGT...TTCTCTTTGAAATTCTTCGAATGGCAGAGGAAATTGGGGATAAAGTCCTTGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000480283.5
ENST00000623316.1
CDS-3UTR GCA 90 bp AAAATCTTCAATCAAGTCCAGAGATATGAGGGACTGGCTGAAAACAAGGACTTTATCCCCAATTTCCTCTaGCATTCGAAGAATTTCAAA +
Preference number: 4 (lower is better)
Translates to: KIFNQVQRYEGLAENKDFIPNFL*HSKNFK
Trigger: TTTGAAATTCTTCGAATGGCAGAGGAAATTGGGGAT...AAAGTCCTTGTTTTCAGCCAGTCCCTCATATCTCTGGACTTGATTGAAGATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000480283.5
ENST00000623316.1
CDS-3UTR GCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACCGAAAAGACAGTGACTaGTTAGTTACTTGCCGATCA +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNRKDSD*LVTCRS
Trigger: TGATCGGCAAGTAACTAAGCAGTCACTGTCTTTTCG...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR GCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACTATCTGAAGGAGCTCTaGAAGTATGGTATCCTTTGG +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNYLKEL*KYGILW
Trigger: CCAAAGGATACCATACTTGCAGAGCTCCTTCAGATA...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR GCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACGAGGTGACCCAGTGTTaGTTGTTGATAAGTCATTTG +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNEVTQC*LLISHL
Trigger: CAAATGACTTATCAACAAGCAACACTGGGTCACCTC...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR GCA 90 bp AGCTGCTTTTCTTTCTTCTTCAGTCAACTCTTCTTCTTCTTTGTGGTCCAAAAGTTCTATGTGCTTTGGTaGATACATCGCTCAAGAATT +
Preference number: 4 (lower is better)
Translates to: SCFSFFFSQLFFFFVVQKFYVLW*IHRSRI
Trigger: AATTCTTGAGCGATGTATGCACCAAAGCACATAGAA...CTTTTGGACCACAAAGAAGAAGAAGAGTTGACTGAAGAAGAAAGAAAAGCAGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR GCA 90 bp ATCTCTCTTTTTGTTTCTTCTCAACAGGCCTTAATAAATAGGACCACCATATTGTTTTTACAACCTGCTTaGTGTTCCGTTGCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: ISLFVSSQQALINRTTILFLQPA*CSVAAV
Trigger: AACAGCAGCAACGGAACAGCAAGCAGGTTGTAAAAA...CAATATGGTGGTCCTATTTATTAAGGCCTGTTGAGAAGAAACAAAAAGAGAGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000493470.2
CDS-3UTR GCA 90 bp ATCTCTCTTTTTGTTTCTTCTCAACAGGCCTTAATAAATAGGACCACCATATTGTATGAGCATGGGGTATaGTATTGTCCAGGAAGTGTT +
Preference number: 4 (lower is better)
Translates to: ISLFVSSQQALINRTTILYEHGV*YCPGSV
Trigger: AACACTTCCTGGACAATAGCATACCCCATGCTCATA...CAATATGGTGGTCCTATTTATTAAGGCCTGTTGAGAAGAAACAAAAAGAGAGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493470.2
CDS-3UTR CCA 90 bp TCTAAAACCTCAGCATCAGCATCTGTAACAAAATCTTTGTACCAGTCTGGAGCTTTGCAGAAAGCATTATaGCAAAAGTCACAACAAATC +
Preference number: 4 (lower is better)
Translates to: SKTSASASVTKSLYQSGALQKAL*QKSQQI
Trigger: GATTTGTTGTGACTTTTGCCATAATGCTTTCTGCAA...AGCTCCAGACTGGTACAAAGATTTTGTTACAGATGCTGATGCTGAGGTTTTAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR CCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACGTCCAACAAAGGCTCTaGGTGACAAATGTAGCAATA +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNVQQRL*VTNVAI
Trigger: TATTGCTACATTTGTCACCCAGAGCCTTTGTTGGAC...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR CCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACAACTGGAGTTCATGTTaGCTGTGGTCTCAATCAGTT +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNNWSSC*LWSQSV
Trigger: AACTGATTGAGACCACAGCCAACATGAACTCCAGTT...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR CCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACTGTAGTCTTTACACGTaGGGATCTTCGAAGATCAGA +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNCSLYT*GSSKIR
Trigger: TCTGATCTTCGAAGATCCCCACGTGTAAAGACTACA...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR CCA 90 bp AAACCAACTTGGTTGTTATTGGACACTTGGTGGGTGAAGCATCTTCAATTTCTATCATCTCCTGAAGATTaGCAAAATCCAGTATGTGAA +
Preference number: 4 (lower is better)
Translates to: KPTWLLLDTWWVKHLQFLSSPED*QNPVCE
Trigger: TTCACATACTGGATTTTGCCAATCTTCAGGAGATGA...TAGAAATTGAAGATGCTTCACCCACCAAGTGTCCAATAACAACCAAGTTGGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR CCA 90 bp TTCATCCAATTCAAAGCAGTATTAAGAGGACAAACCACTAACGCCGTGCTGAAACTAAAAGCATCTTCTTaGCAATTCTATTCTCAGGAT +
Preference number: 4 (lower is better)
Translates to: FIQFKAVLRGQTTNAVLKLKASS*QFYSQD
Trigger: ATCCTGAGAATAGAATTGCCAAGAAGATGCTTTTAG...TTTCAGCACGGCGTTAGTGGTTTGTCCTCTTAATACTGCTTTGAATTGGATGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR CCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAATTGTTATTGGACACTTaGTGGGTGAAGCATCTTCAA +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKLLLDT*WVKHLQ
Trigger: TTGAAGATGCTTCACCCACCAAGTGTCCAATAACAA...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR CCA 90 bp TATTTAATTTTACAGATGAACTCTCCACTTCTTGTTCAGTTCCACTGCTGCCATTTGTTATTGGACACTTaGTGGGTGAAGCATCTTCAA +
Preference number: 4 (lower is better)
Translates to: YLILQMNSPLLVQFHCCHLLLDT*WVKHLQ
Trigger: TTGAAGATGCTTCACCCACCAAGTGTCCAATAACAA...ATGGCAGCAGTGGAACTGAACAAGAAGTGGAGAGTTCATCTGTAAAATTAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR CCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAAAACAAAATCAGGGCCTaGATCAACCAAAGCTTTGTT +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKNKIRA*INQSFV
Trigger: AACAAAGCTTTGGTTGATCCAGGCCCTGATTTTGTT...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR CCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACCGGAGCTTAAACTCATaGAGGTTTCATCAGAATCTG +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNRSLNS*RFHQNL
Trigger: CAGATTCTGATGAAACCTCCATGAGTTTAAGCTCCG...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR CCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAAAGAGATATGAGGGACTaGCTGAAAACAAGGACTTTA +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKRDMRD*LKTRTL
Trigger: TAAAGTCCTTGTTTTCAGCCAGTCCCTCATATCTCT...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR CCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACCTGGATGTCATAAGATaGATTCCAAGAAGCGTCGAA +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNLDVIR*IPRSVE
Trigger: TTCGACGCTTCTTGGAATCCATCTTATGACATCCAG...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR CCA 90 bp ACTTTATCCCCAATTTCCTCTGCCATTCGAAGAATTTCAAAGAGAAGTACCATTAAATCTTATCTTCCATaGTTCCCTGAGCTAAGAACC +
Preference number: 4 (lower is better)
Translates to: TLSPISSAIRRISKRSTIKSYLP*FPELRT
Trigger: GGTTCTTAGCTCAGGGAACCATGGAAGATAAGATTT...AATGGTACTTCTCTTTGAAATTCTTCGAATGGCAGAGGAAATTGGGGATAAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR CCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAAAAATCTTATCTTCCATaGTTCCCTGAGCTAAGAACC +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKKSYLP*FPELRT
Trigger: GGTTCTTAGCTCAGGGAACCATGGAAGATAAGATTT...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR CCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAAATTCATGATCAAATTTaGGGGCTTTGGCATCATGAG +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKIHDQI*GLWHHE
Trigger: CTCATGATGCCAAAGCCCCCAAATTTGATCATGAAT...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR CCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACCACATTGATTTCCCTTaGGAAGGTCCTGGATTTTTG +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNHIDFP*EGPGFL
Trigger: CAAAAATCCAGGACCTTCCCAAGGGAAATCAATGTG...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR CCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAAAAGCCCATCTTCTTTTaGCAAGCTCTGCATAGTAAT +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKKPIFF*QALHSN
Trigger: ATTACTATGCAGAGCTTGCCAAAAGAAGATGGGCTT...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395603.7
3UTR CAA 72 bp TCATCATCTGAAGATCCATCCTCATCAGAGGAAAGATaGGCTTTAATTTCTTCTAAAAGCATCTTCTTGGCA +
Preference number: 4 (lower is better)
Translates to: SSSEDPSSSEER*ALISSKSIFLA
Trigger: TGCCAAGAAGATGCTTTTAGAAGAAATTAAAGCCAATCTTTCCTCTGATGAGGATGGATCTTCAGATGATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR TCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACCTTTTTGAAAATGATTaGCCTGTTGTCCACAAGCAG +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNLFEND*PVVHKQ
Trigger: CTGCTTGTGGACAACAGGTCAATCATTTTCAAAAAG...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR TCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACAGCAGAACTGATTTCTaGATTATCTGTTGCCTGCTT +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNSRTDF*IICCLL
Trigger: AAGCAGGCAACAGATAATTCAGAAATCAGTTCTGCT...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR TCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACTCTTGTGGAACTTCCTaGCAATCAGCACCTTTAATT +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNSCGTS*QSAPLI
Trigger: AATTAAAGGTGCTGATTGTCAGGAAGTTCCACAAGA...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR TCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACTCAGAATCTGAATTTTaGTCCACAGTCTCTGATTGC +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNSESEF*STVSDC
Trigger: GCAATCAGAGACTGTGGATCAAAATTCAGATTCTGA...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR TCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAACATTTCATCAGAATCTaGATTTTGATCCACAGTCTC +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKHFIRI*ILIHSL
Trigger: GAGACTGTGGATCAAAATTCAGATTCTGATGAAATG...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR TCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAATATAGAGCTCTTAGCTaGTTTGCCCTTTTTAGTATC +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKYRALS*FALFSI
Trigger: GATACTAAAAAGGGCAAATCAGCTAAGAGCTCTATA...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR TCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACTTCAGTGCCATCAGATaGAGATTCATACTGTTGTTC +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNFSAIR*RFILLF
Trigger: GAACAACAGTATGAATCTTCATCTGATGGCACTGAA...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR TCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACATGCCCTTAGGAAAATaGCAAATTTCTTCTCGCTCA +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNMPLGK*QISSRS
Trigger: TGAGCGAGAAGAAATTTGTCATTTTCCTAAGGGCAT...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR TCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAATATATCAGAAGAAGATaGGGATGTAATGTCAGCTTG +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKYIRRR*GCNVSL
Trigger: CAAGCTGACATTACATCCTCATCTTCTTCTGATATA...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR TCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAAAAAATCAGAATCTTCTaGATCTTCACTGCTCACCTT +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKKIRIF*IFTAHL
Trigger: AAGGTGAGCAGTGAAGATTCAGAAGATTCTGATTTT...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
37% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR TCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAACACAAAAGAACTGTATaGAGAAAACTTACCACCTGT +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKHKRTV*RKLTTC
Trigger: ACAGGTGGTAAGTTTTCTTCATACAGTTCTTTTGTG...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR TCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAAAATAATCCTCCTCCTTaGTCGTATAGAATTCATAGC +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKNNPPP*SYRIHS
Trigger: GCTATGAATTCTATACGATCAAGGAGGAGGATTATT...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR TCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACTGCAAACACCAAGGATaGGTCCATATTCTACTTAAC +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNCKHQG*VHILLN
Trigger: GTTAAGTAGAATATGGACTCATCCTTGGTGTTTGCA...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR TCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAACAAAGCGATAAACTCTaGATATACTCTGGATGTCAT +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKQSDKL*IYSGCH
Trigger: ATGACATCCAGAGTATATTCAGAGTTTATCGCTTTG...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR TCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACTGTTCTTTATGTATCTaGAGGAGCTCTGCAAGTATG +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNCSLCI*RSSASM
Trigger: CATACTTGCAGAGCTCCTTCAGATACATAAAGAACA...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR TCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACTTCGCTGAACACAGCTaGTTAACATCTGTTGTTTTG +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNFAEHS*LTSVVL
Trigger: CAAAACAACAGATGTTAATCAGCTGTGTTCAGCGAA...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR TCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAATTCATAAGTATTCGCTaGACACAGCTGATTAACATC +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKFISIR*TQLINI
Trigger: GATGTTAATCAGCTGTGTTCAGCGAATACTTATGAA...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR TCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACTCTAGGCAACATCACTaGCAAATGTCAGGAAGAAAT +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNSRQHH*QMSGRN
Trigger: ATTTCTTCCTGACATTTGTCAGTGATGTTGCCTAGA...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR TCA 90 bp ATCTCTCTTTTTGTTTCTTCTCAACAGGCCTTAATAAATAGGACCACCATATTGAACATTATTAGCCTTTaGGTAACATCTGAGGCCTCA +
Preference number: 4 (lower is better)
Translates to: ISLFVSSQQALINRTTILNIISL*VTSEAS
Trigger: TGAGGCCTCAGATGTTACTCAAAGGCTAATAATGTT...CAATATGGTGGTCCTATTTATTAAGGCCTGTTGAGAAGAAACAAAAAGAGAGAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493470.2
CDS-3UTR GCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACTGTGTTTTGATTCATTaGAAGTCGTGGAGGAGAACT +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNCVLIH*KSWRRT
Trigger: AGTTCTCCTCCACGACTTGCAATGAATCAAAACACA...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR GCA 90 bp AACAAGGACTTTATCCCCAATTTCCTCTGCCATTCGAAGAATTTCAAAGAGAAGCCTTTTGGCAAGCTCTaGATAGTAATATCATTTTCT +
Preference number: 4 (lower is better)
Translates to: NKDFIPNFLCHSKNFKEKPFGKL*IVISFS
Trigger: AGAAAATGATATTACTATGCAGAGCTTGCCAAAAGG...CTTCTCTTTGAAATTCTTCGAATGGCAGAGGAAATTGGGGATAAAGTCCTTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR GCA 90 bp AAGGCTCTGGGTGACAAATGTAGCAATACCATTGGTTGTTTTCATCCATTATTGGTAGAATGCATTTCTTaGAGAAAGCATTATGGCAAA +
Preference number: 4 (lower is better)
Translates to: KALGDKCSNTIGCFHPLLVECIS*RKHYGK
Trigger: TTTGCCATAATGCTTTCTGCAAGAAATGCATTCTAC...CAATAATGGATGAAAACAACCAATGGTATTGCTACATTTGTCACCCAGAGCCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR GCA 90 bp AACAAGGACTTTATCCCCAATTTCCTCTGCCATTCGAAGAATTTCAAAGAGAAGTCCACAGTCTCTGATTaGTTAGATTTTGGCAATTTA +
Preference number: 4 (lower is better)
Translates to: NKDFIPNFLCHSKNFKEKSTVSD*LDFGNL
Trigger: TAAATTGCCAAAATCTAAGCAATCAGAGACTGTGGA...CTTCTCTTTGAAATTCTTCGAATGGCAGAGGAAATTGGGGATAAAGTCCTTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR GCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACTGTCTTTATCAACTGTaGCTTCTGCTGAAGAGAAAG +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNCLYQL*LLLKRK
Trigger: CTTTCTCTTCAGCAGAAGGCACAGTTGATAAAGACA...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR GCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAACAGGTAACTTTTCAGTaGCATCAGATGAAGATTCAT +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKQVTFQ*HQMKIH
Trigger: ATGAATCTTCATCTGATGGCACTGAAAAGTTACCTG...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR GCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAATACCATGGTAGAATCTaGACACTGACCATTTTGAAT +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKYHGRI*TLTILN
Trigger: ATTCAAAATGGTCAGTGTGCAGATTCTACCATGGTA...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR GCA 90 bp AAACAAGGACTTTATCCCCAATTTCCTCTGCCATTCGAAGAATTTCAAAGAGAATACCATGGTAGAATCTaGACACTGACCATTTTGAAT +
Preference number: 4 (lower is better)
Translates to: KQGLYPQFPLPFEEFQREYHGRI*TLTILN
Trigger: ATTCAAAATGGTCAGTGTGCAGATTCTACCATGGTA...TTCTCTTTGAAATTCTTCGAATGGCAGAGGAAATTGGGGATAAAGTCCTTGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR GCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACCACCTTCACTATTATTaGCCACACCTGTTAAGTGAT +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNHLHYY*PHLLSD
Trigger: ATCACTTAACAGGTGTGGGCAATAATAGTGAAGGTG...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR GCA 90 bp CCACATAAACTGAACACCATCTACTTGATGGGGTTTCAATTTGATAACCATATTCACCTTCACTATTATTaGCCACACCTGTTAAGTGAT +
Preference number: 4 (lower is better)
Translates to: PHKLNTIYLMGFQFDNHIHLHYY*PHLLSD
Trigger: ATCACTTAACAGGTGTGGGCAATAATAGTGAAGGTG...AATATGGTTATCAAATTGAAACCCCATCAAGTAGATGGTGTTCAGTTTATGTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR GCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAAATCCCCAATTTCCTCTaGCATTCGAAGAATTTCAAA +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKIPNFL*HSKNFK
Trigger: TTTGAAATTCTTCGAATGGCAGAGGAAATTGGGGAT...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR GCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAACCAATTTTACATCTCTaGTACAACTCCTGCCATTTA +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKPILHL*YNSCHL
Trigger: TAAATGGCAGGAGTTGTAGCAGAGATGTAAAATTGG...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675732.1
CDS-3UTR CCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACATTCATTGCAAGTCGTaGAGGAGAACTTGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNIHCKS*RRTCFF
Trigger: GAAGAAACAAGTTCTCCTCCACGACTTGCAATGAAT...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR CCA 90 bp TATTTAATTTTACAGATGAACTCTCCACTTCTTGTTCAGTTCCACTGCTGCCATAATCACTGTACCTTTTaGCAAGCTCTGCATAGTAAT +
Preference number: 4 (lower is better)
Translates to: YLILQMNSPLLVQFHCCHNHCTF*QALHSN
Trigger: ATTACTATGCAGAGCTTGCCAAAAGGTACAGTGATT...ATGGCAGCAGTGGAACTGAACAAGAAGTGGAGAGTTCATCTGTAAAATTAAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR CCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAATTTCATCCATTATTGTaGACAACTCCTTTCGACCAA +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKFHPLL*TTPFDQ
Trigger: TTGGTCGAAAGGAGTTGTCCACAATAATGGATGAAA...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR CCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAAATCAGCACCTTTAATTaGGGAATTAGAAAGGGAAAC +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKISTFN*GIRKGN
Trigger: GTTTCCCTTTCTAATTCCCCAATTAAAGGTGCTGAT...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR CCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACCACATTTCTCTAACTTaGGGTTCAGACCACAACTTT +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNHISLT*GSDHNF
Trigger: AAAGTTGTGGTCTGAACCCCAAGTTAGAGAAATGTG...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR CCA 90 bp AAATCTTCAATCAAGTCCAGAGATATGAGGGACTGGCTGAAAACAAGGACTTTATTAGAAGACTCAGACTaGGTTTGTCGTTTCTTTTTA +
Preference number: 4 (lower is better)
Translates to: KSSIKSRDMRDWLKTRTLLEDSD*VCRFFL
Trigger: TAAAAAGAAACGACAAACCCAGTCTGAGTCTTCTAA...TAAAGTCCTTGTTTTCAGCCAGTCCCTCATATCTCTGGACTTGATTGAAGATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR CCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAATCATCTCCTGAAGATTaGCAAAATCCAGTATGTGAA +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKSSPED*QNPVCE
Trigger: TTCACATACTGGATTTTGCCAATCTTCAGGAGATGA...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR CCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAATTATTGGACACTTGGTaGGTGAAGCATCTTCAATTT +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKLLDTW*VKHLQF
Trigger: AAATTGAAGATGCTTCACCCACCAAGTGTCCAATAA...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR CCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACTTGTTATTGGACACTTaGTGGGTGAAGCATCTTCAA +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNLLLDT*WVKHLQ
Trigger: TTGAAGATGCTTCACCCACCAAGTGTCCAATAACAA...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR CCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAACATCTAAAACCAACTTaGTTGTTATTGGACACTTGG +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKHLKPT*LLLDTW
Trigger: CCAAGTGTCCAATAACAACCAAGTTGGTTTTAGATG...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR CCA 90 bp TATTTAATTTTACAGATGAACTCTCCACTTCTTGTTCAGTTCCACTGCTGCCATCATCTAAAACCAACTTaGTTGTTATTGGACACTTGG +
Preference number: 4 (lower is better)
Translates to: YLILQMNSPLLVQFHCCHHLKPT*LLLDTW
Trigger: CCAAGTGTCCAATAACAACCAAGTTGGTTTTAGATG...ATGGCAGCAGTGGAACTGAACAAGAAGTGGAGAGTTCATCTGTAAAATTAAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR CCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACAACAAAATCAGGGCCTaGATCAACCAAAGCTTTGTT +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNNKIRA*INQSFV
Trigger: AACAAAGCTTTGGTTGATCCAGGCCCTGATTTTGTT...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR CCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACAAATCTTATCTTCCATaGTTCCCTGAGCTAAGAACC +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNKSYLP*FPELRT
Trigger: GGTTCTTAGCTCAGGGAACCATGGAAGATAAGATTT...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR CCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACTTAACATCAAGCTCCTaGCTGGCTTGTCTACTTAAT +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNLTSSS*LACLLN
Trigger: ATTAAGTAGACAAGCCAGCCAGGAGCTTGATGTTAA...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR CCA 90 bp CCACATAAACTGAACACCATCTACTTGATGGGGTTTCAATTTGATAACCATATTTTAACATCAAGCTCCTaGCTGGCTTGTCTACTTAAT +
Preference number: 4 (lower is better)
Translates to: PHKLNTIYLMGFQFDNHILTSSS*LACLLN
Trigger: ATTAAGTAGACAAGCCAGCCAGGAGCTTGATGTTAA...AATATGGTTATCAAATTGAAACCCCATCAAGTAGATGGTGTTCAGTTTATGTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR CCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACATTCATGATCAAATTTaGGGGCTTTGGCATCATGAG +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNIHDQI*GLWHHE
Trigger: CTCATGATGCCAAAGCCCCCAAATTTGATCATGAAT...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR CCA 90 bp AAGGCTCTGGGTGACAAATGTAGCAATACCATTGGTTGTTTTCATCCATTATTGGAGTTGTTACTATTATaGAAGGACTTGTTTTCACTG +
Preference number: 4 (lower is better)
Translates to: KALGDKCSNTIGCFHPLLELLLL*KDLFSL
Trigger: CAGTGAAAACAAGTCCTTCCATAATAGTAACAACTC...CAATAATGGATGAAAACAACCAATGGTATTGCTACATTTGTCACCCAGAGCCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR CCA 90 bp GAAATCAGATACCCTTATGCCCATTATTCCAAAATTCCATGCACTATACCATGCATAGGACCACCATATTaGATGGCAATTAACAATAGT +
Preference number: 4 (lower is better)
Translates to: EIRYPYAHYSKIPCTIPCIGPPY*MAINNS
Trigger: ACTATTGTTAATTGCCATCCAATATGGTGGTCCTAT...GCATGGTATAGTGCATGGAATTTTGGAATAATGGGCATAAGGGTATCTGATTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493470.2
CDS-3UTR TCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACCATTTCATCAGAATCTaGATTTTGATCCACAGTCTC +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNHFIRI*ILIHSL
Trigger: GAGACTGTGGATCAAAATTCAGATTCTGATGAAATG...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR TCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACGATCTCTTAATTCCATaGTGGTCGTGTCTTTATCAA +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNDLLIP*WSCLYQ
Trigger: TTGATAAAGACACGACCATCATGGAATTAAGAGATC...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR TCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACTATATCAGAAGAAGATaGGGATGTAATGTCAGCTTG +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNYIRRR*GCNVSL
Trigger: CAAGCTGACATTACATCCTCATCTTCTTCTGATATA...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR TCA 90 bp ATCTCTCTTTTTGTTTCTTCTCAACAGGCCTTAATAAATAGGACCACCATATTGTATATCAGAAGAAGATaGGGATGTAATGTCAGCTTG +
Preference number: 4 (lower is better)
Translates to: ISLFVSSQQALINRTTILYIRRR*GCNVSL
Trigger: CAAGCTGACATTACATCCTCATCTTCTTCTGATATA...CAATATGGTGGTCCTATTTATTAAGGCCTGTTGAGAAGAAACAAAAAGAGAGAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493470.2
CDS-3UTR TCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACAAAATCAGAATCTTCTaGATCTTCACTGCTCACCTT +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNKIRIF*IFTAHL
Trigger: AAGGTGAGCAGTGAAGATTCAGAAGATTCTGATTTT...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR TCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACCTAACTCCTGATTCCTaGAAATCAGAATCTTCTGAA +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNLTPDS*KSESSE
Trigger: TTCAGAAGATTCTGATTTTCAGGAATCAGGAGTTAG...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR TCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACCACAAAAGAACTGTATaGAGAAAACTTACCACCTGT +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNHKRTV*RKLTTC
Trigger: ACAGGTGGTAAGTTTTCTTCATACAGTTCTTTTGTG...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR TCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACTTCACATTCCTTCCTTaGGCAAGATTTCTATACATC +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNFTFLP*ARFLYI
Trigger: GATGTATAGAAATCTTGCTCAAGGAAGGAATGTGAA...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR TCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACAATAATCCTCCTCCTTaGTCGTATAGAATTCATAGC +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNNNPPP*SYRIHS
Trigger: GCTATGAATTCTATACGATCAAGGAGGAGGATTATT...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR TCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACGGTTTCATCAGAATCTaGGGCTATAAATTCATCCAT +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNGFIRI*GYKFIH
Trigger: ATGGATGAATTTATAGCCTCAGATTCTGATGAAACC...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR GCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAATCCACAGTCTCTGATTaGTTAGATTTTGGCAATTTA +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKSTVSD*LDFGNL
Trigger: TAAATTGCCAAAATCTAAGCAATCAGAGACTGTGGA...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR GCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACGATGTAATGTCAGCTTaGTTCCTTTTAGTGCTTGTT +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNDVMSA*FLLVLV
Trigger: AACAAGCACTAAAAGGAAGCAAGCTGACATTACATC...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR GCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACTACCATGGTAGAATCTaGACACTGACCATTTTGAAT +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNYHGRI*TLTILN
Trigger: ATTCAAAATGGTCAGTGTGCAGATTCTACCATGGTA...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR GCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACTATAGCCTCACAACATaGTACTCTCAAAGGAAACAA +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNYSLTT*YSQRKQ
Trigger: TTGTTTCCTTTGAGAGTAGCATGTTGTGAGGCTATA...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373344.11
CDS-3UTR CCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACTTTCATCCATTATTGTaGACAACTCCTTTCGACCAA +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNFHPLL*TTPFDQ
Trigger: TTGGTCGAAAGGAGTTGTCCACAATAATGGATGAAA...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR CCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACATCAGCACCTTTAATTaGGGAATTAGAAAGGGAAAC +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNISTFN*GIRKGN
Trigger: GTTTCCCTTTCTAATTCCCCAATTAAAGGTGCTGAT...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR CCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAATTAGAAGACTCAGACTaGGTTTGTCGTTTCTTTTTA +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKLEDSD*VCRFFL
Trigger: TAAAAAGAAACGACAAACCCAGTCTGAGTCTTCTAA...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR CCA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAACTAAAAGCATCTTCTTaGCAATTCTATTCTCAGGAT +
Preference number: 4 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKLKASS*QFYSQD
Trigger: ATCCTGAGAATAGAATTGCCAAGAAGATGCTTTTAG...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR CCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACCCTATGTCTGTATCTTaGCTTCTTAGATTCTTCAGA +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNPMSVS*LLRFFR
Trigger: TCTGAAGAATCTAAGAAGCCAAGATACAGACATAGG...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR CCA 90 bp CCACATAAACTGAACACCATCTACTTGATGGGGTTTCAATTTGATAACCATATTTTATTGGACACTTGGTaGGTGAAGCATCTTCAATTT +
Preference number: 4 (lower is better)
Translates to: PHKLNTIYLMGFQFDNHILLDTW*VKHLQF
Trigger: AAATTGAAGATGCTTCACCCACCAAGTGTCCAATAA...AATATGGTTATCAAATTGAAACCCCATCAAGTAGATGGTGTTCAGTTTATGTGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480283.5
ENST00000623242.3
CDS-3UTR CCA 90 bp CTGAACACCATCTACTTGATGGGGTTTCAATTTGATAACCATATTTCTATGAACCATCTAAAACCAACTTaGTTGTTATTGGACACTTGG +
Preference number: 4 (lower is better)
Translates to: LNTIYLMGFQFDNHISMNHLKPT*LLLDTW
Trigger: CCAAGTGTCCAATAACAACCAAGTTGGTTTTAGATG...GTTCATAGAAATATGGTTATCAAATTGAAACCCCATCAAGTAGATGGTGTTCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480283.5
ENST00000623242.3
CDS-3UTR CCA 90 bp CCACATAAACTGAACACCATCTACTTGATGGGGTTTCAATTTGATAACCATATTACTAATATGGAAGATTaGCATTTAAGGGGACCAAAC +
Preference number: 4 (lower is better)
Translates to: PHKLNTIYLMGFQFDNHITNMED*HLRGPN
Trigger: GTTTGGTCCCCTTAAATGCCAATCTTCCATATTAGT...AATATGGTTATCAAATTGAAACCCCATCAAGTAGATGGTGTTCAGTTTATGTGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR CCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACAATATTCAGCTCATTTaGAGGCCAGGTAATAAGGAA +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNNIQLI*RPGNKE
Trigger: TTCCTTATTACCTGGCCTCCAAATGAGCTGAATATT...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373344.11
3UTR CAA 72 bp GACATCTACCATGGTAGAATCTGCACACTGACCATTTaGAATTGGATTTATAAATCTATTCCTGAACTCCTT +
Preference number: 4 (lower is better)
Translates to: DIYHGRICTLTI*NWIYKSIPELL
Trigger: AAGGAGTTCAGGAATAGATTTATAAATCCAATTCAAAATGGTCAGTGTGCAGATTCTACCATGGTAGATGTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR GCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACGTAGAATGCATTTCTTaGAGAAAGCATTATGGCAAA +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNVECIS*RKHYGK
Trigger: TTTGCCATAATGCTTTCTGCAAGAAATGCATTCTAC...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR GCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACTGTCACACTGTTTGTTaGTTCTACAACTTTTTCTCT +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNCHTVC*FYNFFS
Trigger: AGAGAAAAAGTTGTAGAAGCAACAAACAGTGTGACA...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR GCA 90 bp ATCTCTCTTTTTGTTTCTTCTCAACAGGCCTTAATAAATAGGACCACCATATTGTATTCCAAAATTCCATaGACTATACCATGCTGTCTT +
Preference number: 4 (lower is better)
Translates to: ISLFVSSQQALINRTTILYSKIP*TIPCCL
Trigger: AAGACAGCATGGTATAGTGCATGGAATTTTGGAATA...CAATATGGTGGTCCTATTTATTAAGGCCTGTTGAGAAGAAACAAAAAGAGAGAT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493470.2
CDS-3UTR GCA 90 bp ATCTCTCTTTTTGTTTCTTCTCAACAGGCCTTAATAAATAGGACCACCATATTGAATCAGATACCCTTATaGCCATTATTCCAAAATTCC +
Preference number: 4 (lower is better)
Translates to: ISLFVSSQQALINRTTILNQIPL*PLFQNS
Trigger: GGAATTTTGGAATAATGGGCATAAGGGTATCTGATT...CAATATGGTGGTCCTATTTATTAAGGCCTGTTGAGAAGAAACAAAAAGAGAGAT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493470.2
CDS-3UTR CCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACTTGCAGAAAGCATTATaGCAAAAGTCACAACAAATC +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNLQKAL*QKSQQI
Trigger: GATTTGTTGTGACTTTTGCCATAATGCTTTCTGCAA...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR CCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACTTAGAAGACTCAGACTaGGTTTGTCGTTTCTTTTTA +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNLEDSD*VCRFFL
Trigger: TAAAAAGAAACGACAAACCCAGTCTGAGTCTTCTAA...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR CCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACCTAAAAGCATCTTCTTaGCAATTCTATTCTCAGGAT +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNLKASS*QFYSQD
Trigger: ATCCTGAGAATAGAATTGCCAAGAAGATGCTTTTAG...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR CCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACAGAGAATCATGTTCATaGTATCCTACAATGTGTTCT +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNRESCS*YPTMCS
Trigger: AGAACACATTGTAGGATACCATGAACATGATTCTCT...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR CCA 90 bp CCACATAAACTGAACACCATCTACTTGATGGGGTTTCAATTTGATAACCATATTAGAGAATCATGTTCATaGTATCCTACAATGTGTTCT +
Preference number: 4 (lower is better)
Translates to: PHKLNTIYLMGFQFDNHIRESCS*YPTMCS
Trigger: AGAACACATTGTAGGATACCATGAACATGATTCTCT...AATATGGTTATCAAATTGAAACCCCATCAAGTAGATGGTGTTCAGTTTATGTGG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR CCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACTCTTCTTCTTCTTTGTaGTCCAAAAGAGAATCATGT +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNSSSSL*SKRESC
Trigger: ACATGATTCTCTTTTGGACCACAAAGAAGAAGAAGA...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR CCA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACGAGTTGTTACTATTATaGAAGGACTTGTTTTCACTG +
Preference number: 4 (lower is better)
Translates to: KQFEISSVLSVCKKILGNELLLL*KDLFSL
Trigger: CAGTGAAAACAAGTCCTTCCATAATAGTAACAACTC...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR CCA 90 bp ATCTCTCTTTTTGTTTCTTCTCAACAGGCCTTAATAAATAGGACCACCATATTGGACCACCATATTGGATaGCAATTAACAATAGTCAAA +
Preference number: 4 (lower is better)
Translates to: ISLFVSSQQALINRTTILDHHIG*QLTIVK
Trigger: TTTGACTATTGTTAATTGCCATCCAATATGGTGGTC...CAATATGGTGGTCCTATTTATTAAGGCCTGTTGAGAAGAAACAAAAAGAGAGAT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493470.2
CDS GCA 90 bp TCGCTTGAACGCCTTGTCGGCTTCTGTGATTGCTGGGCGCCGATCTaGGCTCCCCCGCGCCCGGTTACGATAGAAATGCACTGGAGTCTT +
Preference number: 5 (lower is better)
Translates to: SLERLVGFCDCWAPI*APPRPVTIEMHWSL
Trigger: AAGACTCCAGTGCATTTCTATCGTAACCGGGCGCGGGGGAGCGCAGATCGGCGCCCAGCAATCACAGAAGCCGACAAGGCGTTCAAGCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000622960.1
ENST00000623321.3
ENST00000624032.3
ENST00000624166.3
ENST00000624193.1
ENST00000624668.3
CDS GCA 90 bp TCAGCGGTCATGTTTTCGCTTGAACGCCTTGTCGGCTTCTGTGATTaGTGGGCGCCGATCTGCGCTCCCCCGCGCCCGGTTACGATAGAA +
Preference number: 5 (lower is better)
Translates to: SAVMFSLERLVGFCD*WAPICAPPRPVTIE
Trigger: TTCTATCGTAACCGGGCGCGGGGGAGCGCAGATCGGCGCCCAGCAATCACAGAAGCCGACAAGGCGTTCAAGCGAAAACATGACCGCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000622960.1
ENST00000623321.3
ENST00000624032.3
ENST00000624166.3
ENST00000624193.1
ENST00000624668.3
CDS CCA 90 bp GCGGTCATGTTTTCGCTTGAACGCCTTGTCGGCTTCTGTGATTGCTaGGCGCCGATCTGCGCTCCCCCGCGCCCGGTTACGATAGAAATG +
Preference number: 5 (lower is better)
Translates to: AVMFSLERLVGFCDC*APICAPPRPVTIEM
Trigger: CATTTCTATCGTAACCGGGCGCGGGGGAGCGCAGATCGGCGCCCAGCAATCACAGAAGCCGACAAGGCGTTCAAGCGAAAACATGACCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000622960.1
ENST00000623321.3
ENST00000624032.3
ENST00000624166.3
ENST00000624193.1
ENST00000624668.3
CDS GCA 90 bp TGTGAGCGAGTCTTTCTAAGGCAGGCACTCCTGGTTTTTACAACCTaGTTGCTGTTCCGTTGCTGCTGTTTGTGCCCATGCCTAGGGTGT +
Preference number: 5 (lower is better)
Translates to: CERVFLRQALLVFTT*LLFRCCCLCPCLGC
Trigger: ACACCCTAGGCATGGGCACAAACAGCAGCAACGGAACAGCAAGCAGGTTGTAAAAACCAGGAGTGCCTGCCTTAGAAAGACTCGCTCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493470.2
CDS GCA 90 bp GAGATGCCAAATAAGAGAACAAGCAAGAGATTGACTCTGAGAGAGTaGAAGTGTAAGAGACAAACCCTCGGGGTAGGAGTGGAGCTCAGA +
Preference number: 5 (lower is better)
Translates to: EMPNKRTSKRLTLRE*KCKRQTLGVGVELR
Trigger: TCTGAGCTCCACTCCTACCCCGAGGGTTTGTCTCTTACACTTGCACTCTCTCAGAGTCAATCTCTTGCTTGTTCTCTTATTTGGCATCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623706.3
CDS-3UTR CAA 90 bp AAGTCTTACCAAGGCCCATACAGTGGGCAAGAATGCATCCTGAACCTGGAGATTGCTGTTGATTACTCATaGCTGACAGGGCTCCCAAAT +
Preference number: 5 (lower is better)
Translates to: KSYQGPYSGQECILNLEIAVDYS*LTGLPN
Trigger: ATTTGGGAGCCCTGTCAGCAATGAGTAATCAACAGC...AATCTCCAGGTTCAGGATGCATTCTTGCCCACTGTATGGGCCTTGGTAAGACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS GCA 90 bp AGGCAGGCACTCCTGGTTTTTACAACCTGCTTGCTGTTCCGTTGCTaGTGTTTGTGCCCATGCCTAGGGTGTGTTATAATCTTTTTAAAG +
Preference number: 5 (lower is better)
Translates to: RQALLVFTTCLLFRC*CLCPCLGCVIIFLK
Trigger: CTTTAAAAAGATTATAACACACCCTAGGCATGGGCACAAACAGCAGCAACGGAACAGCAAGCAGGTTGTAAAAACCAGGAGTGCCTGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000493470.2
CDS GCA 90 bp CTAAGGCAGGCACTCCTGGTTTTTACAACCTGCTTGCTGTTCCGTTaGTGCTGTTTGTGCCCATGCCTAGGGTGTGTTATAATCTTTTTA +
Preference number: 5 (lower is better)
Translates to: LRQALLVFTTCLLFR*CCLCPCLGCVIIFL
Trigger: TAAAAAGATTATAACACACCCTAGGCATGGGCACAAACAGCAGCAACGGAACAGCAAGCAGGTTGTAAAAACCAGGAGTGCCTGCCTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000493470.2
CDS-3UTR CAA 90 bp CTTCTCTGCTTCATACTCAGCCCAAGCTGCTTTTCTTTCTTCTTCAGTCAACTCGAAGGTCCTGGATTTTaGCTTCTCATTGGGGGTGGT +
Preference number: 5 (lower is better)
Translates to: LLCFILSPSCFSFFFSQLEGPGF*LLIGGG
Trigger: ACCACCCCCAATGAGAAGCAAAAATCCAGGACCTTC...GAGTTGACTGAAGAAGAAAGAAAAGCAGCTTGGGCTGAGTATGAAGCAGAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS TCA 90 bp TTTAGCCCATTTTCTGGCCTTTCTTTCAAACTTGCAGGAAGACTGTaGGCGAGTCTTTCTAAGGCAGGCACTCCTGGTTTTTACAACCTG +
Preference number: 5 (lower is better)
Translates to: FSPFSGLSFKLAGRL*ASLSKAGTPGFYNL
Trigger: CAGGTTGTAAAAACCAGGAGTGCCTGCCTTAGAAAGACTCGCTCACAGTCTTCCTGCAAGTTTGAAAGAAAGGCCAGAAAATGGGCTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493470.2
CDS-3UTR CAA 90 bp ATGAACATAGCTAAGGGAAGGCTACAAAATATTCAGCTCATTTGGAGGCCAGGTTTTCGCTTGAACGCCTaGTCGGCTTCTGTGATTGCT +
Preference number: 5 (lower is better)
Translates to: MNIAKGRLQNIQLIWRPGFRLNA*SASVIA
Trigger: AGCAATCACAGAAGCCGACAAGGCGTTCAAGCGAAA...ACCTGGCCTCCAAATGAGCTGAATATTTTGTAGCCTTCCCTTAGCTATGTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373344.11
CDS-3UTR CAA 90 bp ATGAACATAGCTAAGGGAAGGCTACAAAATATTCAGCTCATTTGGAGGCCAGGTAGTGGAAGCACTTGCTaGCTGCTTCTTAGGAAGTCG +
Preference number: 5 (lower is better)
Translates to: MNIAKGRLQNIQLIWRPGSGSTC*LLLRKS
Trigger: CGACTTCCTAAGAAGCAGCAAGCAAGTGCTTCCACT...ACCTGGCCTCCAAATGAGCTGAATATTTTGTAGCCTTCCCTTAGCTATGTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373344.11
CDS-3UTR CAA 90 bp CAATTCAAAGCAGTATTAAGAGGACAAACCACTAACGCCGTGCTGAAATCCAGTAGTGGAAGCACTTGCTaGCTGCTTCTTAGGAAGTCG +
Preference number: 5 (lower is better)
Translates to: QFKAVLRGQTTNAVLKSSSGSTC*LLLRKS
Trigger: CGACTTCCTAAGAAGCAGCAAGCAAGTGCTTCCACT...ACTGGATTTCAGCACGGCGTTAGTGGTTTGTCCTCTTAATACTGCTTTGAATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR CAA 90 bp ACCTGTAAAGTCTTACCAAGGCCCATACAGTGGGCAAGAATGCATCCTGAACCTCTATTCTCAGGATCATaGTCGTCATCATCATCATCC +
Preference number: 5 (lower is better)
Translates to: TCKVLPRPIQWARMHPEPLFSGS*SSSSSS
Trigger: GGATGATGATGATGACGACAATGATCCTGAGAATAG...AGGTTCAGGATGCATTCTTGCCCACTGTATGGGCCTTGGTAAGACTTTACAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR CAA 90 bp CAATTCAAAGCAGTATTAAGAGGACAAACCACTAACGCCGTGCTGAAATCCAGTCTTTCTTTGCAGACCTaGTTCTGGGCCGCTGTTCAT +
Preference number: 5 (lower is better)
Translates to: QFKAVLRGQTTNAVLKSSLSLQT*FWAAVH
Trigger: ATGAACAGCGGCCCAGAACAAGGTCTGCAAAGAAAG...ACTGGATTTCAGCACGGCGTTAGTGGTTTGTCCTCTTAATACTGCTTTGAATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR CAA 90 bp CAATTCAAAGCAGTATTAAGAGGACAAACCACTAACGCCGTGCTGAAATCCAGTGATTTTTGCTTCTCATaGGGGGTGGTGCACGCTGTA +
Preference number: 5 (lower is better)
Translates to: QFKAVLRGQTTNAVLKSSDFCFS*GVVHAV
Trigger: TACAGCGTGCACCACCCCCAATGAGAAGCAAAAATC...ACTGGATTTCAGCACGGCGTTAGTGGTTTGTCCTCTTAATACTGCTTTGAATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR CAA 90 bp GAAATCAGATACCCTTATGCCCATTATTCCAAAATTCCATGCACTATACCATGCTTCCGTTGCTGCTGTTaGTGCCCATGCCTAGGGTGT +
Preference number: 5 (lower is better)
Translates to: EIRYPYAHYSKIPCTIPCFRCCC*CPCLGC
Trigger: ACACCCTAGGCATGGGCACAAACAGCAGCAACGGAA...GCATGGTATAGTGCATGGAATTTTGGAATAATGGGCATAAGGGTATCTGATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493470.2
CDS-3UTR CAA 90 bp GAAATCAGATACCCTTATGCCCATTATTCCAAAATTCCATGCACTATACCATGCCTGCTTGCTGTTCCGTaGCTGCTGTTTGTGCCCATG +
Preference number: 5 (lower is better)
Translates to: EIRYPYAHYSKIPCTIPCLLAVP*LLFVPM
Trigger: CATGGGCACAAACAGCAGCAACGGAACAGCAAGCAG...GCATGGTATAGTGCATGGAATTTTGGAATAATGGGCATAAGGGTATCTGATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493470.2
CDS GCA 90 bp CTCCTGGTTTTTACAACCTGCTTGCTGTTCCGTTGCTGCTGTTTGTaGCCATGCCTAGGGTGTGTTATAATCTTTTTAAAGTCCTTACAG +
Preference number: 5 (lower is better)
Translates to: LLVFTTCLLFRCCCL*PCLGCVIIFLKSLQ
Trigger: CTGTAAGGACTTTAAAAAGATTATAACACACCCTAGGCATGGGCACAAACAGCAGCAACGGAACAGCAAGCAGGTTGTAAAAACCAGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000493470.2
CDS-3UTR CAA 90 bp ATGAACATAGCTAAGGGAAGGCTACAAAATATTCAGCTCATTTGGAGGCCAGGTCCAACTTGGTTGTTATaGGACACTTGGTGGGTGAAG +
Preference number: 5 (lower is better)
Translates to: MNIAKGRLQNIQLIWRPGPTWLL*DTWWVK
Trigger: CTTCACCCACCAAGTGTCCAATAACAACCAAGTTGG...ACCTGGCCTCCAAATGAGCTGAATATTTTGTAGCCTTCCCTTAGCTATGTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373344.11
CDS-3UTR CAA 90 bp TCCACATTTCCTTCACCACCTCCCCGAGATCTTGAATTCCAGACCTTAATCACTTATCTTCTATGTGCTTaGGTGCATACATCGCTCAAG +
Preference number: 5 (lower is better)
Translates to: STFPSPPPRDLEFQTLITYLLCA*VHTSLK
Trigger: CTTGAGCGATGTATGCACCAAAGCACATAGAAGATA...AGTGATTAAGGTCTGGAATTCAAGATCTCGGGGAGGTGGTGAAGGAAATGTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR CAA 90 bp CATGCACTATACCATGCTGTCTTCTTGTTGAAGATTATGAGCATGGGGTATGCTGTTTTTACAACCTGCTaGCTGTTCCGTTGCTGCTGT +
Preference number: 5 (lower is better)
Translates to: HALYHAVFLLKIMSMGYAVFTTC*LFRCCC
Trigger: ACAGCAGCAACGGAACAGCAAGCAGGTTGTAAAAAC...AGCATACCCCATGCTCATAATCTTCAACAAGAAGACAGCATGGTATAGTGCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493470.2
CDS-3UTR CAA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAACGGTCATGTTTTCGCTaGAACGCCTTGTCGGCTTCT +
Preference number: 5 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKRSCFR*NALSAS
Trigger: AGAAGCCGACAAGGCGTTCAAGCGAAAACATGACCG...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR CAA 90 bp ATGAACATAGCTAAGGGAAGGCTACAAAATATTCAGCTCATTTGGAGGCCAGGTTTGAAGGTTTCCTCTTaGATCGTGACGATCCTGAAG +
Preference number: 5 (lower is better)
Translates to: MNIAKGRLQNIQLIWRPGLKVSS*IVTILK
Trigger: CTTCAGGATCGTCACGATCAAAGAGGAAACCTTCAA...ACCTGGCCTCCAAATGAGCTGAATATTTTGTAGCCTTCCCTTAGCTATGTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373344.11
CDS-3UTR CAA 90 bp CAATTCAAAGCAGTATTAAGAGGACAAACCACTAACGCCGTGCTGAAATCCAGTTTGAAGGTTTCCTCTTaGATCGTGACGATCCTGAAG +
Preference number: 5 (lower is better)
Translates to: QFKAVLRGQTTNAVLKSSLKVSS*IVTILK
Trigger: CTTCAGGATCGTCACGATCAAAGAGGAAACCTTCAA...ACTGGATTTCAGCACGGCGTTAGTGGTTTGTCCTCTTAATACTGCTTTGAATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR CAA 90 bp ATGAACATAGCTAAGGGAAGGCTACAAAATATTCAGCTCATTTGGAGGCCAGGTAAAATGATTGACCTGTaGTCCACAAGCAGTGCAGCT +
Preference number: 5 (lower is better)
Translates to: MNIAKGRLQNIQLIWRPGKMIDL*STSSAA
Trigger: AGCTGCACTGCTTGTGGACAACAGGTCAATCATTTT...ACCTGGCCTCCAAATGAGCTGAATATTTTGTAGCCTTCCCTTAGCTATGTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373344.11
CDS-3UTR CAA 90 bp AAAGCAGTATTAAGAGGACAAACCACTAACGCCGTGCTGAAATCCAGTTTGTCAAAAATGATTGACCTGTaGTCCACAAGCAGTGCAGCT +
Preference number: 5 (lower is better)
Translates to: KAVLRGQTTNAVLKSSLSKMIDL*STSSAA
Trigger: AGCTGCACTGCTTGTGGACAACAGGTCAATCATTTT...TGACAAACTGGATTTCAGCACGGCGTTAGTGGTTTGTCCTCTTAATACTGCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR CAA 90 bp CAGTGTTGCTTGTTGATAAGTCATTTGTTGCTGTTGCTGCTGATTGTACTGCTGTCCTTTCGACCAAGGTaGCGTAGAATGCATTTCTTG +
Preference number: 5 (lower is better)
Translates to: QCCLLISHLLLLLLIVLLSFRPR*RRMHFL
Trigger: CAAGAAATGCATTCTACGCAACCTTGGTCGAAAGGA...CAGCAGTACAATCAGCAGCAACAGCAACAAATGACTTATCAACAAGCAACACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR CAA 90 bp ATGAACATAGCTAAGGGAAGGCTACAAAATATTCAGCTCATTTGGAGGCCAGGTCCACATTTCTCTAACTaGGGGTTCAGACCACAACTT +
Preference number: 5 (lower is better)
Translates to: MNIAKGRLQNIQLIWRPGPHFSN*GFRPQL
Trigger: AAGTTGTGGTCTGAACCCCAAGTTAGAGAAATGTGG...ACCTGGCCTCCAAATGAGCTGAATATTTTGTAGCCTTCCCTTAGCTATGTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373344.11
CDS-3UTR CAA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAACCAACTCTGCTTTCTTaGCAGACCTTGTTCTGGGCC +
Preference number: 5 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKPTLLS*QTLFWA
Trigger: GGCCCAGAACAAGGTCTGCAAAGAAAGCAGAGTTGG...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR CAA 90 bp TTGGTTGTTATTGGACACTTGGTGGGTGAAGCATCTTCAATTTCTATCACGCCTGTTGTTATTGGACACTaGGTGGGTGAAGCATCTTCA +
Preference number: 5 (lower is better)
Translates to: LVVIGHLVGEASSISITPVVIGH*VGEASS
Trigger: TGAAGATGCTTCACCCACCAAGTGTCCAATAACAAC...AGGCGTGATAGAAATTGAAGATGCTTCACCCACCAAGTGTCCAATAACAACCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623242.3
CDS-3UTR CAA 90 bp TCTAAAACCTCAGCATCAGCATCTGTAACAAAATCTTTGTACCAGTCTGGAGCTCCAACTTGGTTGTTATaGGACACTTGGTGGGTGAAG +
Preference number: 5 (lower is better)
Translates to: SKTSASASVTKSLYQSGAPTWLL*DTWWVK
Trigger: CTTCACCCACCAAGTGTCCAATAACAACCAAGTTGG...AGCTCCAGACTGGTACAAAGATTTTGTTACAGATGCTGATGCTGAGGTTTTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR CAA 90 bp TTCATCCAATTCAAAGCAGTATTAAGAGGACAAACCACTAACGCCGTGCTGAAACCAACTTGGTTGTTATaGGACACTTGGTGGGTGAAG +
Preference number: 5 (lower is better)
Translates to: FIQFKAVLRGQTTNAVLKPTWLL*DTWWVK
Trigger: CTTCACCCACCAAGTGTCCAATAACAACCAAGTTGG...TTTCAGCACGGCGTTAGTGGTTTGTCCTCTTAATACTGCTTTGAATTGGATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480283.5
ENST00000623242.3
CDS-3UTR CAA 90 bp AAGTCTTACCAAGGCCCATACAGTGGGCAAGAATGCATCCTGAACCTGGAGATTTCATCTAAAACCAACTaGGTTGTTATTGGACACTTG +
Preference number: 5 (lower is better)
Translates to: KSYQGPYSGQECILNLEISSKTN*VVIGHL
Trigger: CAAGTGTCCAATAACAACCAAGTTGGTTTTAGATGA...AATCTCCAGGTTCAGGATGCATTCTTGCCCACTGTATGGGCCTTGGTAAGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480283.5
ENST00000623242.3
CDS-3UTR CAA 90 bp ATGAACATAGCTAAGGGAAGGCTACAAAATATTCAGCTCATTTGGAGGCCAGGTTCTGTAACAAAATCTTaGTACCAGTCTGGAGCTGGG +
Preference number: 5 (lower is better)
Translates to: MNIAKGRLQNIQLIWRPGSVTKS*YQSGAG
Trigger: CCCAGCTCCAGACTGGTACAAAGATTTTGTTACAGA...ACCTGGCCTCCAAATGAGCTGAATATTTTGTAGCCTTCCCTTAGCTATGTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373344.11
CDS-3UTR CAA 90 bp AAGGCTCTGGGTGACAAATGTAGCAATACCATTGGTTGTTTTCATCCATTATTGCAAGTATGGTATCCTTaGGCAGCATGGGAGTATCCC +
Preference number: 5 (lower is better)
Translates to: KALGDKCSNTIGCFHPLLQVWYP*AAWEYP
Trigger: GGGATACTCCCATGCTGCCAAAGGATACCATACTTG...CAATAATGGATGAAAACAACCAATGGTATTGCTACATTTGTCACCCAGAGCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR CAA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAAGTCCCAGTTGGTATGTaGAAACGCATGGTCAGTCCC +
Preference number: 5 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKVPVGM*KRMVSP
Trigger: GGGACTGACCATGCGTTTCAACATACCAACTGGGAC...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR CAA 90 bp TATTTAATTTTACAGATGAACTCTCCACTTCTTGTTCAGTTCCACTGCTGCCATGTCCCAGTTGGTATGTaGAAACGCATGGTCAGTCCC +
Preference number: 5 (lower is better)
Translates to: YLILQMNSPLLVQFHCCHVPVGM*KRMVSP
Trigger: GGGACTGACCATGCGTTTCAACATACCAACTGGGAC...ATGGCAGCAGTGGAACTGAACAAGAAGTGGAGAGTTCATCTGTAAAATTAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR CAA 90 bp AAAATCTTCAATCAAGTCCAGAGATATGAGGGACTGGCTGAAAACAAGGACTTTCTGACAGGGGGTAAATaGGTCCCAGTTGGTATGTTG +
Preference number: 5 (lower is better)
Translates to: KIFNQVQRYEGLAENKDFLTGGK*VPVGML
Trigger: CAACATACCAACTGGGACCAATTTACCCCCTGTCAG...AAAGTCCTTGTTTTCAGCCAGTCCCTCATATCTCTGGACTTGATTGAAGATTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR CAA 90 bp ATGAACATAGCTAAGGGAAGGCTACAAAATATTCAGCTCATTTGGAGGCCAGGTAGTCATTTGTTGCTGTaGCTGCTGATTGTACTGCTG +
Preference number: 5 (lower is better)
Translates to: MNIAKGRLQNIQLIWRPGSHLLL*LLIVLL
Trigger: CAGCAGTACAATCAGCAGCAACAGCAACAAATGACT...ACCTGGCCTCCAAATGAGCTGAATATTTTGTAGCCTTCCCTTAGCTATGTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373344.11
CDS-3UTR CAA 90 bp CATGCACTATACCATGCTGTCTTCTTGTTGAAGATTATGAGCATGGGGTATGCTCATGCTGTCTTCTTGTaGAAGATTATGAGCATGGGG +
Preference number: 5 (lower is better)
Translates to: HALYHAVFLLKIMSMGYAHAVFL*KIMSMG
Trigger: CCCCATGCTCATAATCTTCAACAAGAAGACAGCATG...AGCATACCCCATGCTCATAATCTTCAACAAGAAGACAGCATGGTATAGTGCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493470.2
CDS TCA 90 bp GAACTTGTTTCTTCAGATTCTTCTGATGAGTGTGCAAGGAAGTCATaGAGCTTCTGCACCAATGTATTCAACTTGCTTTCACTCATGGGC +
Preference number: 5 (lower is better)
Translates to: ELVSSDSSDECARKS*SFCTNVFNLLSLMG
Trigger: GCCCATGAGTGAAAGCAAGTTGAATACATTGGTGCAGAAGCTTCATGACTTCCTTGCACACTCATCAGAAGAATCTGAAGAAACAAGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000624032.3
ENST00000624166.3
ENST00000624193.1
CDS TCA 90 bp CTATGTTTGACTTTTCATATATGCAGGTTCTGCGGGATTTGTGTATaGGCAAATTTTGGTATACACAGGCAGGTCCTAGAACCAATCCCC +
Preference number: 5 (lower is better)
Translates to: LCLTFHICRFCGICV*ANFGIHRQVLEPIP
Trigger: GGGGATTGGTTCTAGGACCTGCCTGTGTATACCAAAATTTGCTCATACACAAATCCCGCAGAACCTGCATATATGAAAAGTCAAACATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675908.1
CDS-3UTR CAA 90 bp GTATTTTTCTCTTTGTTTACAGCATCCATCGCTCGAAACTCGGAATTTAAGTCTTTTCGCTTGAACGCCTaGTCGGCTTCTGTGATTGCT +
Preference number: 5 (lower is better)
Translates to: VFFSLFTASIARNSEFKSFRLNA*SASVIA
Trigger: AGCAATCACAGAAGCCGACAAGGCGTTCAAGCGAAA...AGACTTAAATTCCGAGTTTCGAGCGATGGATGCTGTAAACAAAGAGAAAAATAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR CAA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACCGGTCATGTTTTCGCTaGAACGCCTTGTCGGCTTCT +
Preference number: 5 (lower is better)
Translates to: KQFEISSVLSVCKKILGNRSCFR*NALSAS
Trigger: AGAAGCCGACAAGGCGTTCAAGCGAAAACATGACCG...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR CAA 90 bp AGAAAATCTTCAATCAAGTCCAGAGATATGAGGGACTGGCTGAAAACAAGGACTCTGTGTTTTGATTCATaGCAAGTCGTGGAGGAGAAC +
Preference number: 5 (lower is better)
Translates to: RKSSIKSRDMRDWLKTRTLCFDS*QVVEEN
Trigger: GTTCTCCTCCACGACTTGCAATGAATCAAAACACAG...AGTCCTTGTTTTCAGCCAGTCCCTCATATCTCTGGACTTGATTGAAGATTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR CAA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAAAGTGGAAGCACTTGCTaGCTGCTTCTTAGGAAGTCG +
Preference number: 5 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKSGSTC*LLLRKS
Trigger: CGACTTCCTAAGAAGCAGCAAGCAAGTGCTTCCACT...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR CAA 90 bp ATGAACATAGCTAAGGGAAGGCTACAAAATATTCAGCTCATTTGGAGGCCAGGTTATCTCCTTTCCCTGTaGACTTCTCAGCATAATCAG +
Preference number: 5 (lower is better)
Translates to: MNIAKGRLQNIQLIWRPGYLLSL*TSQHNQ
Trigger: CTGATTATGCTGAGAAGTCAACAGGGAAAGGAGATA...ACCTGGCCTCCAAATGAGCTGAATATTTTGTAGCCTTCCCTTAGCTATGTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373344.11
CDS-3UTR CAA 90 bp ATGAACATAGCTAAGGGAAGGCTACAAAATATTCAGCTCATTTGGAGGCCAGGTGGATGTAATGTCAGCTaGCTTCCTTTTAGTGCTTGT +
Preference number: 5 (lower is better)
Translates to: MNIAKGRLQNIQLIWRPGGCNVS*LPFSAC
Trigger: ACAAGCACTAAAAGGAAGCAAGCTGACATTACATCC...ACCTGGCCTCCAAATGAGCTGAATATTTTGTAGCCTTCCCTTAGCTATGTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373344.11
CDS-3UTR CAA 90 bp TTTTATTATCTTCAGAACTTTCCTCAGCATCAGATGATGATGAGCCACTTTGTACCAACTCTGCTTTCTTaGCAGACCTTGTTCTGGGCC +
Preference number: 5 (lower is better)
Translates to: FYYLQNFPQHQMMMSHFVPTLLS*QTLFWA
Trigger: GGCCCAGAACAAGGTCTGCAAAGAAAGCAGAGTTGG...TACAAAGTGGCTCATCATCATCTGATGCTGAGGAAAGTTCTGAAGATAATAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR CAA 90 bp ACTTTATCCCCAATTTCCTCTGCCATTCGAAGAATTTCAAAGAGAAGTACCATTAACACCACCATCTTCTaGCCACCTCTGCAGCATGTA +
Preference number: 5 (lower is better)
Translates to: TLSPISSAIRRISKRSTINTTIF*PPLQHV
Trigger: TACATGCTGCAGAGGTGGCAAGAAGATGGTGGTGTT...AATGGTACTTCTCTTTGAAATTCTTCGAATGGCAGAGGAAATTGGGGATAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR CAA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAAAACACCACCATCTTCTaGCCACCTCTGCAGCATGTA +
Preference number: 5 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKNTTIF*PPLQHV
Trigger: TACATGCTGCAGAGGTGGCAAGAAGATGGTGGTGTT...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR CAA 90 bp ATGAACATAGCTAAGGGAAGGCTACAAAATATTCAGCTCATTTGGAGGCCAGGTATCACTTCAACATCATaGTCACTGCCACTTCCACTT +
Preference number: 5 (lower is better)
Translates to: MNIAKGRLQNIQLIWRPGITSTS*SLPLPL
Trigger: AAGTGGAAGTGGCAGTGACAATGATGTTGAAGTGAT...ACCTGGCCTCCAAATGAGCTGAATATTTTGTAGCCTTCCCTTAGCTATGTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373344.11
CDS-3UTR CAA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAACAAGTATGGTATCCTTaGGCAGCATGGGAGTATCCC +
Preference number: 5 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKQVWYP*AAWEYP
Trigger: GGGATACTCCCATGCTGCCAAAGGATACCATACTTG...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR CAA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACGTCCCAGTTGGTATGTaGAAACGCATGGTCAGTCCC +
Preference number: 5 (lower is better)
Translates to: KQFEISSVLSVCKKILGNVPVGM*KRMVSP
Trigger: GGGACTGACCATGCGTTTCAACATACCAACTGGGAC...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR CAA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAACTGACAGGGGGTAAATaGGTCCCAGTTGGTATGTTG +
Preference number: 5 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKLTGGK*VPVGML
Trigger: CAACATACCAACTGGGACCAATTTACCCCCTGTCAG...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR CAA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAAGAAGGTCCTGGATTTTaGCTTCTCATTGGGGGTGGT +
Preference number: 5 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKEGPGF*LLIGGG
Trigger: ACCACCCCCAATGAGAAGCAAAAATCCAGGACCTTC...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR CAA 90 bp ATGAACATAGCTAAGGGAAGGCTACAAAATATTCAGCTCATTTGGAGGCCAGGTAACTTGATCACTCCTTaGGGACTGGCTCAGATTATA +
Preference number: 5 (lower is better)
Translates to: MNIAKGRLQNIQLIWRPGNLITP*GLAQII
Trigger: TATAATCTGAGCCAGTCCCAAAGGAGTGATCAAGTT...ACCTGGCCTCCAAATGAGCTGAATATTTTGTAGCCTTCCCTTAGCTATGTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373344.11
CDS-3UTR CAA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACTTTCGCTTGAACGCCTaGTCGGCTTCTGTGATTGCT +
Preference number: 5 (lower is better)
Translates to: KQFEISSVLSVCKKILGNFRLNA*SASVIA
Trigger: AGCAATCACAGAAGCCGACAAGGCGTTCAAGCGAAA...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR CAA 90 bp ATGAACATAGCTAAGGGAAGGCTACAAAATATTCAGCTCATTTGGAGGCCAGGTTTCTTAATCATCTCTTaGGGCACAATTAGTGCGGAA +
Preference number: 5 (lower is better)
Translates to: MNIAKGRLQNIQLIWRPGFLIIS*GTISAE
Trigger: TTCCGCACTAATTGTGCCCAAAGAGATGATTAAGAA...ACCTGGCCTCCAAATGAGCTGAATATTTTGTAGCCTTCCCTTAGCTATGTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373344.11
CDS-3UTR CAA 90 bp ATGAACATAGCTAAGGGAAGGCTACAAAATATTCAGCTCATTTGGAGGCCAGGTATAGCCATCTTTATCTaGTGGAACTTCCTGACAATC +
Preference number: 5 (lower is better)
Translates to: MNIAKGRLQNIQLIWRPGIAIFI*WNFLTI
Trigger: GATTGTCAGGAAGTTCCACAAGATAAAGATGGCTAT...ACCTGGCCTCCAAATGAGCTGAATATTTTGTAGCCTTCCCTTAGCTATGTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373344.11
CDS-3UTR CAA 90 bp CAATTCAAAGCAGTATTAAGAGGACAAACCACTAACGCCGTGCTGAAATCCAGTATAGCCATCTTTATCTaGTGGAACTTCCTGACAATC +
Preference number: 5 (lower is better)
Translates to: QFKAVLRGQTTNAVLKSSIAIFI*WNFLTI
Trigger: GATTGTCAGGAAGTTCCACAAGATAAAGATGGCTAT...ACTGGATTTCAGCACGGCGTTAGTGGTTTGTCCTCTTAATACTGCTTTGAATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR CAA 90 bp AGCTGCTTTTCTTTCTTCTTCAGTCAACTCTTCTTCTTCTTTGTGGTCCAAAAGTCACTCACAGTCAATTaGTGCCGCAAAAGCCTATGT +
Preference number: 5 (lower is better)
Translates to: SCFSFFFSQLFFFFVVQKSLTVN*CRKSLC
Trigger: ACATAGGCTTTTGCGGCACAAATTGACTGTGAGTGA...CTTTTGGACCACAAAGAAGAAGAAGAGTTGACTGAAGAAGAAAGAAAAGCAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR CAA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACCTTTCTTTGCAGACCTaGTTCTGGGCCGCTGTTCAT +
Preference number: 5 (lower is better)
Translates to: KQFEISSVLSVCKKILGNLSLQT*FWAAVH
Trigger: ATGAACAGCGGCCCAGAACAAGGTCTGCAAAGAAAG...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR CAA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAACCAACTTGGTTGTTATaGGACACTTGGTGGGTGAAG +
Preference number: 5 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKPTWLL*DTWWVK
Trigger: CTTCACCCACCAAGTGTCCAATAACAACCAAGTTGG...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR CAA 90 bp TTGGTTGTTATTGGACACTTGGTGGGTGAAGCATCTTCAATTTCTATCACGCCTCTGAACACCATCTACTaGATGGGGTTTCAATTTGAT +
Preference number: 5 (lower is better)
Translates to: LVVIGHLVGEASSISITPLNTIY*MGFQFD
Trigger: ATCAAATTGAAACCCCATCAAGTAGATGGTGTTCAG...AGGCGTGATAGAAATTGAAGATGCTTCACCCACCAAGTGTCCAATAACAACCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623242.3
CDS-3UTR CAA 90 bp AAAGCAGTATTAAGAGGACAAACCACTAACGCCGTGCTGAAATCCAGTTTGTCAGTGCTGAAATCCAGTTaGTCACACAAAAGAACTGTA +
Preference number: 5 (lower is better)
Translates to: KAVLRGQTTNAVLKSSLSVLKSS*SHKRTV
Trigger: TACAGTTCTTTTGTGTGACAAACTGGATTTCAGCAC...TGACAAACTGGATTTCAGCACGGCGTTAGTGGTTTGTCCTCTTAATACTGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480283.5
ENST00000623242.3
CDS-3UTR CAA 90 bp CAATTCAAAGCAGTATTAAGAGGACAAACCACTAACGCCGTGCTGAAATCCAGTGTGCTGAAATCCAGTTaGTCACACAAAAGAACTGTA +
Preference number: 5 (lower is better)
Translates to: QFKAVLRGQTTNAVLKSSVLKSS*SHKRTV
Trigger: TACAGTTCTTTTGTGTGACAAACTGGATTTCAGCAC...ACTGGATTTCAGCACGGCGTTAGTGGTTTGTCCTCTTAATACTGCTTTGAATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480283.5
ENST00000623242.3
CDS-3UTR CAA 90 bp TTCATCCAATTCAAAGCAGTATTAAGAGGACAAACCACTAACGCCGTGCTGAAAGAGGACGTTTCACAGTaGCTAATTCAGAAACCTCAA +
Preference number: 5 (lower is better)
Translates to: FIQFKAVLRGQTTNAVLKEDVSQ*LIQKPQ
Trigger: TTGAGGTTTCTGAATTAGCAACTGTGAAACGTCCTC...TTTCAGCACGGCGTTAGTGGTTTGTCCTCTTAATACTGCTTTGAATTGGATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480283.5
ENST00000623242.3
CDS-3UTR CAA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACAACACCACCATCTTCTaGCCACCTCTGCAGCATGTA +
Preference number: 5 (lower is better)
Translates to: KQFEISSVLSVCKKILGNNTTIF*PPLQHV
Trigger: TACATGCTGCAGAGGTGGCAAGAAGATGGTGGTGTT...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR CAA 90 bp GACTTTATCCCCAATTTCCTCTGCCATTCGAAGAATTTCAAAGAGAAGTACCATTCTGTAACAAAATCTTaGTACCAGTCTGGAGCTGGG +
Preference number: 5 (lower is better)
Translates to: DFIPNFLCHSKNFKEKYHSVTKS*YQSGAG
Trigger: CCCAGCTCCAGACTGGTACAAAGATTTTGTTACAGA...ATGGTACTTCTCTTTGAAATTCTTCGAATGGCAGAGGAAATTGGGGATAAAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480283.5
ENST00000623316.1
CDS-3UTR CAA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACCAAGTATGGTATCCTTaGGCAGCATGGGAGTATCCC +
Preference number: 5 (lower is better)
Translates to: KQFEISSVLSVCKKILGNQVWYP*AAWEYP
Trigger: GGGATACTCCCATGCTGCCAAAGGATACCATACTTG...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR CAA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACCTGACAGGGGGTAAATaGGTCCCAGTTGGTATGTTG +
Preference number: 5 (lower is better)
Translates to: KQFEISSVLSVCKKILGNLTGGK*VPVGML
Trigger: CAACATACCAACTGGGACCAATTTACCCCCTGTCAG...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR CAA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAAGCTGTTGATTACTCATaGCTGACAGGGCTCCCAAAT +
Preference number: 5 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKAVDYS*LTGLPN
Trigger: ATTTGGGAGCCCTGTCAGCAATGAGTAATCAACAGC...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR CAA 90 bp ATGAACATAGCTAAGGGAAGGCTACAAAATATTCAGCTCATTTGGAGGCCAGGTAACTTTTTCTCTTCCTaGATTAATGAGGTCCTCCAG +
Preference number: 5 (lower is better)
Translates to: MNIAKGRLQNIQLIWRPGNFFSS*INEVLQ
Trigger: CTGGAGGACCTCATTAATCAAGGAAGAGAAAAAGTT...ACCTGGCCTCCAAATGAGCTGAATATTTTGTAGCCTTCCCTTAGCTATGTTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373344.11
CDS-3UTR CAA 90 bp GTTCCTCTGTTGGAACATTCTGATGCATGTGCTCACTATCTACCTGTTTTCTTGAACTTTTTCTCTTCCTaGATTAATGAGGTCCTCCAG +
Preference number: 5 (lower is better)
Translates to: VPLLEHSDACAHYLPVFLNFFSS*INEVLQ
Trigger: CTGGAGGACCTCATTAATCAAGGAAGAGAAAAAGTT...CAAGAAAACAGGTAGATAGTGAGCACATGCATCAGAATGTTCCAACAGAGGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR CAA 90 bp TCTTCAATCAAGTCCAGAGATATGAGGGACTGGCTGAAAACAAGGACTTTATCCCTGTCACACTGTTTGTaGCTTCTACAACTTTTTCTC +
Preference number: 5 (lower is better)
Translates to: SSIKSRDMRDWLKTRTLSLSHCL*LLQLFL
Trigger: GAGAAAAAGTTGTAGAAGCAACAAACAGTGTGACAG...GGATAAAGTCCTTGTTTTCAGCCAGTCCCTCATATCTCTGGACTTGATTGAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR CAA 90 bp AAATCTTCAATCAAGTCCAGAGATATGAGGGACTGGCTGAAAACAAGGACTTTATATATCCTCAAGAGGTaGAATCCTCACTGCTGTCAC +
Preference number: 5 (lower is better)
Translates to: KSSIKSRDMRDWLKTRTLYILKR*NPHCCH
Trigger: GTGACAGCAGTGAGGATTCAACCTCTTGAGGATATA...TAAAGTCCTTGTTTTCAGCCAGTCCCTCATATCTCTGGACTTGATTGAAGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR CAA 90 bp AAATCTTCAATCAAGTCCAGAGATATGAGGGACTGGCTGAAAACAAGGACTTTAAGTCATTTGTTGCTGTaGCTGCTGATTGTACTGCTG +
Preference number: 5 (lower is better)
Translates to: KSSIKSRDMRDWLKTRTLSHLLL*LLIVLL
Trigger: CAGCAGTACAATCAGCAGCAACAGCAACAAATGACT...TAAAGTCCTTGTTTTCAGCCAGTCCCTCATATCTCTGGACTTGATTGAAGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR CAA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACGATTTTTGCTTCTCATaGGGGGTGGTGCACGCTGTA +
Preference number: 5 (lower is better)
Translates to: KQFEISSVLSVCKKILGNDFCFS*GVVHAV
Trigger: TACAGCGTGCACCACCCCCAATGAGAAGCAAAAATC...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR CAA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACGAAGGTCCTGGATTTTaGCTTCTCATTGGGGGTGGT +
Preference number: 5 (lower is better)
Translates to: KQFEISSVLSVCKKILGNEGPGF*LLIGGG
Trigger: ACCACCCCCAATGAGAAGCAAAAATCCAGGACCTTC...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR CAA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAATCTATCAAGTGTGGGTaGGTAGCCCTGCTTGACTTA +
Preference number: 5 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKSIKCG*VALLDL
Trigger: TAAGTCAAGCAGGGCTACCAACCCACACTTGATAGA...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373344.11
CDS-3UTR CAA 90 bp TGGAACCATCTAAACGGTAATAGTCAATGTTTCGAAGCCACTTCCCCTCACCTTAAACTAGGTAATTCTTaGGAGATTTTCTCCCACATG +
Preference number: 5 (lower is better)
Translates to: WNHLNGNSQCFEATSPHLKLGNS*EIFSHM
Trigger: CATGTGGGAGAAAATCTCCAAAGAATTACCTAGTTT...AAGGTGAGGGGAAGTGGCTTCGAAACATTGACTATTACCGTTTAGATGGTTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR CAA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAACTGTGTTTTGATTCATaGCAAGTCGTGGAGGAGAAC +
Preference number: 5 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKLCFDS*QVVEEN
Trigger: GTTCTCCTCCACGACTTGCAATGAATCAAAACACAG...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR CAA 90 bp ATGAACATAGCTAAGGGAAGGCTACAAAATATTCAGCTCATTTGGAGGCCAGGTGATTTTATCTGTGTTTaGATTCATTGCAAGTCGTGG +
Preference number: 5 (lower is better)
Translates to: MNIAKGRLQNIQLIWRPGDFICV*IHCKSW
Trigger: CCACGACTTGCAATGAATCAAAACACAGATAAAATC...ACCTGGCCTCCAAATGAGCTGAATATTTTGTAGCCTTCCCTTAGCTATGTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373344.11
CDS-3UTR CAA 90 bp GACTTTATCCCCAATTTCCTCTGCCATTCGAAGAATTTCAAAGAGAAGTACCATGACGATCCTGAAGACTaGGATTTTTCTGAAGAGCTA +
Preference number: 5 (lower is better)
Translates to: DFIPNFLCHSKNFKEKYHDDPED*DFSEEL
Trigger: TAGCTCTTCAGAAAAATCCAAGTCTTCAGGATCGTC...ATGGTACTTCTCTTTGAAATTCTTCGAATGGCAGAGGAAATTGGGGATAAAGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR CAA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAATTGAAGGTTTCCTCTTaGATCGTGACGATCCTGAAG +
Preference number: 5 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKLKVSS*IVTILK
Trigger: CTTCAGGATCGTCACGATCAAAGAGGAAACCTTCAA...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR CAA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAAAAAATGATTGACCTGTaGTCCACAAGCAGTGCAGCT +
Preference number: 5 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKKMIDL*STSSAA
Trigger: AGCTGCACTGCTTGTGGACAACAGGTCAATCATTTT...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
40% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR CAA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAACCACATTTCTCTAACTaGGGGTTCAGACCACAACTT +
Preference number: 5 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKPHFSN*GFRPQL
Trigger: AAGTTGTGGTCTGAACCCCAAGTTAGAGAAATGTGG...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR CAA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAAATCCTGCTCACCTCTTaGAGGATTGCTAGCATTTCA +
Preference number: 5 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKILLTS*RIASIS
Trigger: TGAAATGCTAGCAATCCTCAAAGAGGTGAGCAGGAT...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR CAA 90 bp GTATTTTTCTCTTTGTTTACAGCATCCATCGCTCGAAACTCGGAATTTAAGTCTATCCTGCTCACCTCTTaGAGGATTGCTAGCATTTCA +
Preference number: 5 (lower is better)
Translates to: VFFSLFTASIARNSEFKSILLTS*RIASIS
Trigger: TGAAATGCTAGCAATCCTCAAAGAGGTGAGCAGGAT...AGACTTAAATTCCGAGTTTCGAGCGATGGATGCTGTAAACAAAGAGAAAAATAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR CAA 90 bp CATGCACTATACCATGCTGTCTTCTTGTTGAAGATTATGAGCATGGGGTATGCTTTTCTCTTTTTCTCCTaGACAATGACTGCCTTCTTT +
Preference number: 5 (lower is better)
Translates to: HALYHAVFLLKIMSMGYAFLFFS*TMTAFF
Trigger: AAAGAAGGCAGTCATTGTCAAGGAGAAAAAGAGAAA...AGCATACCCCATGCTCATAATCTTCAACAAGAAGACAGCATGGTATAGTGCATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000493470.2
CDS-3UTR CAA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAATCACTCACAGTCAATTaGTGCCGCAAAAGCCTATGT +
Preference number: 5 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKSLTVN*CRKSLC
Trigger: ACATAGGCTTTTGCGGCACAAATTGACTGTGAGTGA...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR CAA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAAGTTGTTATTGGACACTaGGTGGGTGAAGCATCTTCA +
Preference number: 5 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKVVIGH*VGEASS
Trigger: TGAAGATGCTTCACCCACCAAGTGTCCAATAACAAC...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR CAA 90 bp ATGAACATAGCTAAGGGAAGGCTACAAAATATTCAGCTCATTTGGAGGCCAGGTTCATCTAAAACCAACTaGGTTGTTATTGGACACTTG +
Preference number: 5 (lower is better)
Translates to: MNIAKGRLQNIQLIWRPGSSKTN*VVIGHL
Trigger: CAAGTGTCCAATAACAACCAAGTTGGTTTTAGATGA...ACCTGGCCTCCAAATGAGCTGAATATTTTGTAGCCTTCCCTTAGCTATGTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373344.11
CDS-3UTR CAA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAATCTGTAACAAAATCTTaGTACCAGTCTGGAGCTGGG +
Preference number: 5 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKSVTKS*YQSGAG
Trigger: CCCAGCTCCAGACTGGTACAAAGATTTTGTTACAGA...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR CAA 90 bp GTTCCTCTGTTGGAACATTCTGATGCATGTGCTCACTATCTACCTGTTTTCTTGAACTCTTCTTCTTCTTaGTGGTCCAAAAGAGAATCA +
Preference number: 5 (lower is better)
Translates to: VPLLEHSDACAHYLPVFLNSSSS*WSKRES
Trigger: TGATTCTCTTTTGGACCACAAAGAAGAAGAAGAGTT...CAAGAAAACAGGTAGATAGTGAGCACATGCATCAGAATGTTCCAACAGAGGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR CAA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACGCTGTTGATTACTCATaGCTGACAGGGCTCCCAAAT +
Preference number: 5 (lower is better)
Translates to: KQFEISSVLSVCKKILGNAVDYS*LTGLPN
Trigger: ATTTGGGAGCCCTGTCAGCAATGAGTAATCAACAGC...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR CAA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAATATATCCTCAAGAGGTaGAATCCTCACTGCTGTCAC +
Preference number: 5 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKYILKR*NPHCCH
Trigger: GTGACAGCAGTGAGGATTCAACCTCTTGAGGATATA...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR CAA 90 bp ATGAACATAGCTAAGGGAAGGCTACAAAATATTCAGCTCATTTGGAGGCCAGGTTTGTTGATAAGTCATTaGTTGCTGTTGCTGCTGATT +
Preference number: 5 (lower is better)
Translates to: MNIAKGRLQNIQLIWRPGLLISH*LLLLLI
Trigger: AATCAGCAGCAACAGCAACAAATGACTTATCAACAA...ACCTGGCCTCCAAATGAGCTGAATATTTTGTAGCCTTCCCTTAGCTATGTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373344.11
CDS-3UTR CAA 90 bp GAAATCAGATACCCTTATGCCCATTATTCCAAAATTCCATGCACTATACCATGCGCATGGGGTATGCTATaGTCCAGGAAGTGTTTAAAA +
Preference number: 5 (lower is better)
Translates to: EIRYPYAHYSKIPCTIPCAWGML*SRKCLK
Trigger: TTTTAAACACTTCCTGGACAATAGCATACCCCATGC...GCATGGTATAGTGCATGGAATTTTGGAATAATGGGCATAAGGGTATCTGATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493470.2
CDS TCA 90 bp GAACTTGTTTCTTCAGATTCTTCTGATGAGTGTGCAAGGAAGTCATaGAGCTTCTGCACCAATGTATTCAACTTGCTTTCACTAAAGAGA +
Preference number: 5 (lower is better)
Translates to: ELVSSDSSDECARKS*SFCTNVFNLLSLKR
Trigger: TCTCTTTAGTGAAAGCAAGTTGAATACATTGGTGCAGAAGCTTCATGACTTCCTTGCACACTCATCAGAAGAATCTGAAGAAACAAGTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622960.1
CDS GCA 90 bp TATATCCTCAAGAGGTTGAATCCTCACTGCTGTCACACTGTTTGTTaGTTCTACAACTTTTTCTCTTCCTTGATTAATGAGGTCCTAGAA +
Preference number: 5 (lower is better)
Translates to: YILKRLNPHCCHTVC*FYNFFSSLINEVLE
Trigger: TTCTAGGACCTCATTAATCAAGGAAGAGAAAAAGTTGTAGAAGCAACAAACAGTGTGACAGCAGTGAGGATTCAACCTCTTGAGGATATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000623706.3
CDS CCA 90 bp AGCATCTGTAACAAAATCTTTGTACCAGTCTGGAGCTGGGCTGCTTaGATTAGAAGAAGAAGTAGCTTTACCTTCTTCAATTTACCATTT +
Preference number: 5 (lower is better)
Translates to: SICNKIFVPVWSWAA*IRRRSSFTFFNLPF
Trigger: AAATGGTAAATTGAAGAAGGTAAAGCTACTTCTTCTTCTAATCCAAGCAGCCCAGCTCCAGACTGGTACAAAGATTTTGTTACAGATGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623316.1
CDS-3UTR CAA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAAACCAATGTATTCAACTaGCTTTCACTCATGGGCTCA +
Preference number: 5 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKTNVFN*LSLMGS
Trigger: TGAGCCCATGAGTGAAAGCAAGTTGAATACATTGGT...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR CAA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAACTAGTTCCCTCTTCCTaGCTGTTTTCCATCATATCA +
Preference number: 5 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKLVPSS*LFSIIS
Trigger: TGATATGATGGAAAACAGCAAGGAAGAGGGAACTAG...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR CAA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAAGACGATCCTGAAGACTaGGATTTTTCTGAAGAGCTA +
Preference number: 5 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKDDPED*DFSEEL
Trigger: TAGCTCTTCAGAAAAATCCAAGTCTTCAGGATCGTC...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR CAA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACTCCTTTCGACCAAGGTaGCGTAGAATGCATTTCTTG +
Preference number: 5 (lower is better)
Translates to: KQFEISSVLSVCKKILGNSFRPR*RRMHFL
Trigger: CAAGAAATGCATTCTACGCAACCTTGGTCGAAAGGA...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR CAA 90 bp AAATCTTCAATCAAGTCCAGAGATATGAGGGACTGGCTGAAAACAAGGACTTTATGTTTTCATCCATTATaGTGGACAACTCCTTTCGAC +
Preference number: 5 (lower is better)
Translates to: KSSIKSRDMRDWLKTRTLCFHPL*WTTPFD
Trigger: GTCGAAAGGAGTTGTCCACAATAATGGATGAAAACA...TAAAGTCCTTGTTTTCAGCCAGTCCCTCATATCTCTGGACTTGATTGAAGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR CAA 90 bp AAAATCTTCAATCAAGTCCAGAGATATGAGGGACTGGCTGAAAACAAGGACTTTCACCGGTACTTTTATTaGTTCTTTGTTCCTCTGTTG +
Preference number: 5 (lower is better)
Translates to: KIFNQVQRYEGLAENKDFHRYFY*FFVPLL
Trigger: CAACAGAGGAACAAAGAACAAATAAAAGTACCGGTG...AAAGTCCTTGTTTTCAGCCAGTCCCTCATATCTCTGGACTTGATTGAAGATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR CAA 90 bp TTTTATTATCTTCAGAACTTTCCTCAGCATCAGATGATGATGAGCCACTTTGTACCACATTTCTCTAACTaGGGGTTCAGACCACAACTT +
Preference number: 5 (lower is better)
Translates to: FYYLQNFPQHQMMMSHFVPHFSN*GFRPQL
Trigger: AAGTTGTGGTCTGAACCCCAAGTTAGAGAAATGTGG...TACAAAGTGGCTCATCATCATCTGATGCTGAGGAAAGTTCTGAAGATAATAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR CAA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACATCCTGCTCACCTCTTaGAGGATTGCTAGCATTTCA +
Preference number: 5 (lower is better)
Translates to: KQFEISSVLSVCKKILGNILLTS*RIASIS
Trigger: TGAAATGCTAGCAATCCTCAAAGAGGTGAGCAGGAT...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR CAA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAATATCTCCTTTCCCTGTaGACTTCTCAGCATAATCAG +
Preference number: 5 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKYLLSL*TSQHNQ
Trigger: CTGATTATGCTGAGAAGTCAACAGGGAAAGGAGATA...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR CAA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAAGGATGTAATGTCAGCTaGCTTCCTTTTAGTGCTTGT +
Preference number: 5 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKGCNVS*LPFSAC
Trigger: ACAAGCACTAAAAGGAAGCAAGCTGACATTACATCC...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR CAA 90 bp TATTTAATTTTACAGATGAACTCTCCACTTCTTGTTCAGTTCCACTGCTGCCATGGATGTAATGTCAGCTaGCTTCCTTTTAGTGCTTGT +
Preference number: 5 (lower is better)
Translates to: YLILQMNSPLLVQFHCCHGCNVS*LPFSAC
Trigger: ACAAGCACTAAAAGGAAGCAAGCTGACATTACATCC...ATGGCAGCAGTGGAACTGAACAAGAAGTGGAGAGTTCATCTGTAAAATTAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR CAA 90 bp AAATCTTCAATCAAGTCCAGAGATATGAGGGACTGGCTGAAAACAAGGACTTTACTGAACACCATCTACTaGATGGGGTTTCAATTTGAT +
Preference number: 5 (lower is better)
Translates to: KSSIKSRDMRDWLKTRTLLNTIY*MGFQFD
Trigger: ATCAAATTGAAACCCCATCAAGTAGATGGTGTTCAG...TAAAGTCCTTGTTTTCAGCCAGTCCCTCATATCTCTGGACTTGATTGAAGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR CAA 90 bp GTATTTTTCTCTTTGTTTACAGCATCCATCGCTCGAAACTCGGAATTTAAGTCTGAGGACGTTTCACAGTaGCTAATTCAGAAACCTCAA +
Preference number: 5 (lower is better)
Translates to: VFFSLFTASIARNSEFKSEDVSQ*LIQKPQ
Trigger: TTGAGGTTTCTGAATTAGCAACTGTGAAACGTCCTC...AGACTTAAATTCCGAGTTTCGAGCGATGGATGCTGTAAACAAAGAGAAAAATAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR CAA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAAATCACTTCAACATCATaGTCACTGCCACTTCCACTT +
Preference number: 5 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKITSTS*SLPLPL
Trigger: AAGTGGAAGTGGCAGTGACAATGATGTTGAAGTGAT...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR CAA 90 bp ACTTTATCCCCAATTTCCTCTGCCATTCGAAGAATTTCAAAGAGAAGTACCATTATCACTTCAACATCATaGTCACTGCCACTTCCACTT +
Preference number: 5 (lower is better)
Translates to: TLSPISSAIRRISKRSTIITSTS*SLPLPL
Trigger: AAGTGGAAGTGGCAGTGACAATGATGTTGAAGTGAT...AATGGTACTTCTCTTTGAAATTCTTCGAATGGCAGAGGAAATTGGGGATAAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480283.5
ENST00000623316.1
CDS-3UTR CAA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACTCTGTAACAAAATCTTaGTACCAGTCTGGAGCTGGG +
Preference number: 5 (lower is better)
Translates to: KQFEISSVLSVCKKILGNSVTKS*YQSGAG
Trigger: CCCAGCTCCAGACTGGTACAAAGATTTTGTTACAGA...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR CAA 90 bp AGCTGCTTTTCTTTCTTCTTCAGTCAACTCTTCTTCTTCTTTGTGGTCCAAAAGCTGCTGTCACACTGTTaGTTGCTTCTACAACTTTTT +
Preference number: 5 (lower is better)
Translates to: SCFSFFFSQLFFFFVVQKLLSHC*LLLQLF
Trigger: AAAAAGTTGTAGAAGCAACAAACAGTGTGACAGCAG...CTTTTGGACCACAAAGAAGAAGAAGAGTTGACTGAAGAAGAAAGAAAAGCAGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR CAA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACTATATCCTCAAGAGGTaGAATCCTCACTGCTGTCAC +
Preference number: 5 (lower is better)
Translates to: KQFEISSVLSVCKKILGNYILKR*NPHCCH
Trigger: GTGACAGCAGTGAGGATTCAACCTCTTGAGGATATA...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR CAA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACAGTCATTTGTTGCTGTaGCTGCTGATTGTACTGCTG +
Preference number: 5 (lower is better)
Translates to: KQFEISSVLSVCKKILGNSHLLL*LLIVLL
Trigger: CAGCAGTACAATCAGCAGCAACAGCAACAAATGACT...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR CAA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAAACCCAGTGTTGCTTGTaGATAAGTCATTTGTTGCTG +
Preference number: 5 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKTQCCL*ISHLLL
Trigger: CAGCAACAAATGACTTATCAACAAGCAACACTGGGT...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR CAA 90 bp AAACAAGGACTTTATCCCCAATTTCCTCTGCCATTCGAAGAATTTCAAAGAGAAACCCAGTGTTGCTTGTaGATAAGTCATTTGTTGCTG +
Preference number: 5 (lower is better)
Translates to: KQGLYPQFPLPFEEFQRETQCCL*ISHLLL
Trigger: CAGCAACAAATGACTTATCAACAAGCAACACTGGGT...TTCTCTTTGAAATTCTTCGAATGGCAGAGGAAATTGGGGATAAAGTCCTTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR CAA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAAGTGACCCAGTGTTGCTaGTTGATAAGTCATTTGTTG +
Preference number: 5 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKVTQCC*LISHLL
Trigger: CAACAAATGACTTATCAACAAGCAACACTGGGTCAC...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR CAA 90 bp GTATTTTTCTCTTTGTTTACAGCATCCATCGCTCGAAACTCGGAATTTAAGTCTGTGACCCAGTGTTGCTaGTTGATAAGTCATTTGTTG +
Preference number: 5 (lower is better)
Translates to: VFFSLFTASIARNSEFKSVTQCC*LISHLL
Trigger: CAACAAATGACTTATCAACAAGCAACACTGGGTCAC...AGACTTAAATTCCGAGTTTCGAGCGATGGATGCTGTAAACAAAGAGAAAAATAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR CAA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAAAAGGGTAGATCTGATTaGGAGATAGCCAAGTCACTT +
Preference number: 5 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKKGRSD*EIAKSL
Trigger: AAGTGACTTGGCTATCTCCAAATCAGATCTACCCTT...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373344.11
CDS-3UTR CAA 90 bp GAAATCAGATACCCTTATGCCCATTATTCCAAAATTCCATGCACTATACCATGCTACCATGCTGTCTTCTaGTTGAAGATTATGAGCATG +
Preference number: 5 (lower is better)
Translates to: EIRYPYAHYSKIPCTIPCYHAVF*LKIMSM
Trigger: CATGCTCATAATCTTCAACAAGAAGACAGCATGGTA...GCATGGTATAGTGCATGGAATTTTGGAATAATGGGCATAAGGGTATCTGATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493470.2
CDS-3UTR CAA 90 bp GAAATCAGATACCCTTATGCCCATTATTCCAAAATTCCATGCACTATACCATGCTCCCTGATGAATAAATaGTATGCCCTTATCACTCCA +
Preference number: 5 (lower is better)
Translates to: EIRYPYAHYSKIPCTIPCSLMNK*YALITP
Trigger: TGGAGTGATAAGGGCATACAATTTATTCATCAGGGA...GCATGGTATAGTGCATGGAATTTTGGAATAATGGGCATAAGGGTATCTGATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493470.2
CDS GCA 90 bp CATATTTTGGGAGTGCATGTGATATTTTGTTACATGCATAGAATATaGAATGATCAAGTCAGGGTATTCAGGGTATCCATCACCTTGAGT +
Preference number: 5 (lower is better)
Translates to: HILGVHVIFCYMHRI*NDQVRVFRVSITLS
Trigger: ACTCAAGGTGATGGATACCCTGAATACCCTGACTTGATCATTGCATATTCTATGCATGTAACAAAATATCACATGCACTCCCAAAATATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675908.1
CDS-3UTR CAA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACACCAATGTATTCAACTaGCTTTCACTCATGGGCTCA +
Preference number: 5 (lower is better)
Translates to: KQFEISSVLSVCKKILGNTNVFN*LSLMGS
Trigger: TGAGCCCATGAGTGAAAGCAAGTTGAATACATTGGT...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR CAA 90 bp CCACATAAACTGAACACCATCTACTTGATGGGGTTTCAATTTGATAACCATATTACCAATGTATTCAACTaGCTTTCACTCATGGGCTCA +
Preference number: 5 (lower is better)
Translates to: PHKLNTIYLMGFQFDNHITNVFN*LSLMGS
Trigger: TGAGCCCATGAGTGAAAGCAAGTTGAATACATTGGT...AATATGGTTATCAAATTGAAACCCCATCAAGTAGATGGTGTTCAGTTTATGTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR CAA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACCTAGTTCCCTCTTCCTaGCTGTTTTCCATCATATCA +
Preference number: 5 (lower is better)
Translates to: KQFEISSVLSVCKKILGNLVPSS*LFSIIS
Trigger: TGATATGATGGAAAACAGCAAGGAAGAGGGAACTAG...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR CAA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACGACGATCCTGAAGACTaGGATTTTTCTGAAGAGCTA +
Preference number: 5 (lower is better)
Translates to: KQFEISSVLSVCKKILGNDDPED*DFSEEL
Trigger: TAGCTCTTCAGAAAAATCCAAGTCTTCAGGATCGTC...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR CAA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAATGTTTTCATCCATTATaGTGGACAACTCCTTTCGAC +
Preference number: 5 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKCFHPL*WTTPFD
Trigger: GTCGAAAGGAGTTGTCCACAATAATGGATGAAAACA...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR CAA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAATTCTTAATCATCTCTTaGGGCACAATTAGTGCGGAA +
Preference number: 5 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKFLIIS*GTISAE
Trigger: TTCCGCACTAATTGTGCCCAAAGAGATGATTAAGAA...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR CAA 90 bp GTATTTTTCTCTTTGTTTACAGCATCCATCGCTCGAAACTCGGAATTTAAGTCTTTCTTAATCATCTCTTaGGGCACAATTAGTGCGGAA +
Preference number: 5 (lower is better)
Translates to: VFFSLFTASIARNSEFKSFLIIS*GTISAE
Trigger: TTCCGCACTAATTGTGCCCAAAGAGATGATTAAGAA...AGACTTAAATTCCGAGTTTCGAGCGATGGATGCTGTAAACAAAGAGAAAAATAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR CAA 90 bp AAATCTTCAATCAAGTCCAGAGATATGAGGGACTGGCTGAAAACAAGGACTTTATTGGTATTTTTCTCTTaGTTTACAGCATCCATCGCT +
Preference number: 5 (lower is better)
Translates to: KSSIKSRDMRDWLKTRTLLVFFS*FTASIA
Trigger: AGCGATGGATGCTGTAAACAAAGAGAAAAATACCAA...TAAAGTCCTTGTTTTCAGCCAGTCCCTCATATCTCTGGACTTGATTGAAGATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR CAA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAACACCGGTACTTTTATTaGTTCTTTGTTCCTCTGTTG +
Preference number: 5 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKHRYFY*FFVPLL
Trigger: CAACAGAGGAACAAAGAACAAATAAAAGTACCGGTG...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR CAA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAAATAGCCATCTTTATCTaGTGGAACTTCCTGACAATC +
Preference number: 5 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKIAIFI*WNFLTI
Trigger: GATTGTCAGGAAGTTCCACAAGATAAAGATGGCTAT...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR CAA 90 bp AAAATCTTCAATCAAGTCCAGAGATATGAGGGACTGGCTGAAAACAAGGACTTTAGACTCAGACTGGGTTaGTCGTTTCTTTTTAGAAAT +
Preference number: 5 (lower is better)
Translates to: KIFNQVQRYEGLAENKDFRLRLG*SFLFRN
Trigger: ATTTCTAAAAAGAAACGACAAACCCAGTCTGAGTCT...AAAGTCCTTGTTTTCAGCCAGTCCCTCATATCTCTGGACTTGATTGAAGATTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR CAA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACTATCTCCTTTCCCTGTaGACTTCTCAGCATAATCAG +
Preference number: 5 (lower is better)
Translates to: KQFEISSVLSVCKKILGNYLLSL*TSQHNQ
Trigger: CTGATTATGCTGAGAAGTCAACAGGGAAAGGAGATA...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR CAA 90 bp ATCTCTCTTTTTGTTTCTTCTCAACAGGCCTTAATAAATAGGACCACCATATTGTATCTCCTTTCCCTGTaGACTTCTCAGCATAATCAG +
Preference number: 5 (lower is better)
Translates to: ISLFVSSQQALINRTTILYLLSL*TSQHNQ
Trigger: CTGATTATGCTGAGAAGTCAACAGGGAAAGGAGATA...CAATATGGTGGTCCTATTTATTAAGGCCTGTTGAGAAGAAACAAAAAGAGAGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493470.2
CDS-3UTR CAA 90 bp AAATCTTCAATCAAGTCCAGAGATATGAGGGACTGGCTGAAAACAAGGACTTTATTTCTCTTTTTCTCCTaGACAATGACTGCCTTCTTT +
Preference number: 5 (lower is better)
Translates to: KSSIKSRDMRDWLKTRTLFLFFS*TMTAFF
Trigger: AAAGAAGGCAGTCATTGTCAAGGAGAAAAAGAGAAA...TAAAGTCCTTGTTTTCAGCCAGTCCCTCATATCTCTGGACTTGATTGAAGATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR CAA 90 bp ATCTCTCTTTTTGTTTCTTCTCAACAGGCCTTAATAAATAGGACCACCATATTGGGATGTAATGTCAGCTaGCTTCCTTTTAGTGCTTGT +
Preference number: 5 (lower is better)
Translates to: ISLFVSSQQALINRTTILGCNVS*LPFSAC
Trigger: ACAAGCACTAAAAGGAAGCAAGCTGACATTACATCC...CAATATGGTGGTCCTATTTATTAAGGCCTGTTGAGAAGAAACAAAAAGAGAGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493470.2
CDS-3UTR CAA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACCTATTCTCAGGATCATaGTCGTCATCATCATCATCC +
Preference number: 5 (lower is better)
Translates to: KQFEISSVLSVCKKILGNLFSGS*SSSSSS
Trigger: GGATGATGATGATGACGACAATGATCCTGAGAATAG...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR CAA 90 bp ATCTCTCTTTTTGTTTCTTCTCAACAGGCCTTAATAAATAGGACCACCATATTGCTATTCTCAGGATCATaGTCGTCATCATCATCATCC +
Preference number: 5 (lower is better)
Translates to: ISLFVSSQQALINRTTILLFSGS*SSSSSS
Trigger: GGATGATGATGATGACGACAATGATCCTGAGAATAG...CAATATGGTGGTCCTATTTATTAAGGCCTGTTGAGAAGAAACAAAAAGAGAGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493470.2
CDS-3UTR CAA 90 bp AAGGCTCTGGGTGACAAATGTAGCAATACCATTGGTTGTTTTCATCCATTATTGTCTAAAAGCATCTTCTaGGCAATTCTATTCTCAGGA +
Preference number: 5 (lower is better)
Translates to: KALGDKCSNTIGCFHPLLSKSIF*AILFSG
Trigger: TCCTGAGAATAGAATTGCCAAGAAGATGCTTTTAGA...CAATAATGGATGAAAACAACCAATGGTATTGCTACATTTGTCACCCAGAGCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR CAA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACGAGGACGTTTCACAGTaGCTAATTCAGAAACCTCAA +
Preference number: 5 (lower is better)
Translates to: KQFEISSVLSVCKKILGNEDVSQ*LIQKPQ
Trigger: TTGAGGTTTCTGAATTAGCAACTGTGAAACGTCCTC...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR CAA 90 bp AACAAGGACTTTATCCCCAATTTCCTCTGCCATTCGAAGAATTTCAAAGAGAAGCTTCACATTCCTTCCTaGAGCAAGATTTCTATACAT +
Preference number: 5 (lower is better)
Translates to: NKDFIPNFLCHSKNFKEKLHIPS*SKISIH
Trigger: ATGTATAGAAATCTTGCTCAAGGAAGGAATGTGAAG...CTTCTCTTTGAAATTCTTCGAATGGCAGAGGAAATTGGGGATAAAGTCCTTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR CAA 90 bp CCACATAAACTGAACACCATCTACTTGATGGGGTTTCAATTTGATAACCATATTATCACTTCAACATCATaGTCACTGCCACTTCCACTT +
Preference number: 5 (lower is better)
Translates to: PHKLNTIYLMGFQFDNHIITSTS*SLPLPL
Trigger: AAGTGGAAGTGGCAGTGACAATGATGTTGAAGTGAT...AATATGGTTATCAAATTGAAACCCCATCAAGTAGATGGTGTTCAGTTTATGTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR CAA 90 bp AAGGCTCTGGGTGACAAATGTAGCAATACCATTGGTTGTTTTCATCCATTATTGAAAGAAACAGAAGGATaGTTTCCTGTTTCATCCACA +
Preference number: 5 (lower is better)
Translates to: KALGDKCSNTIGCFHPLLKETEG*FPVSST
Trigger: TGTGGATGAAACAGGAAACAATCCTTCTGTTTCTTT...CAATAATGGATGAAAACAACCAATGGTATTGCTACATTTGTCACCCAGAGCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR CAA 90 bp GACTTTATCCCCAATTTCCTCTGCCATTCGAAGAATTTCAAAGAGAAGTACCATAAAGAAACAGAAGGATaGTTTCCTGTTTCATCCACA +
Preference number: 5 (lower is better)
Translates to: DFIPNFLCHSKNFKEKYHKETEG*FPVSST
Trigger: TGTGGATGAAACAGGAAACAATCCTTCTGTTTCTTT...ATGGTACTTCTCTTTGAAATTCTTCGAATGGCAGAGGAAATTGGGGATAAAGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480283.5
ENST00000623316.1
CDS-3UTR CAA 90 bp AAATCTTCAATCAAGTCCAGAGATATGAGGGACTGGCTGAAAACAAGGACTTTAATAAACAGGCTTAGTTaGTCCAAAGCGATAAACTCT +
Preference number: 5 (lower is better)
Translates to: KSSIKSRDMRDWLKTRTLINRLS*SKAINS
Trigger: AGAGTTTATCGCTTTGGACAAACTAAGCCTGTTTAT...TAAAGTCCTTGTTTTCAGCCAGTCCCTCATATCTCTGGACTTGATTGAAGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR CAA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAAAACTTTTTCTCTTCCTaGATTAATGAGGTCCTCCAG +
Preference number: 5 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKNFFSS*INEVLQ
Trigger: CTGGAGGACCTCATTAATCAAGGAAGAGAAAAAGTT...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR CAA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAACTGTCACACTGTTTGTaGCTTCTACAACTTTTTCTC +
Preference number: 5 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKLSHCL*LLQLFL
Trigger: GAGAAAAAGTTGTAGAAGCAACAAACAGTGTGACAG...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR CAA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAACTGCTGTCACACTGTTaGTTGCTTCTACAACTTTTT +
Preference number: 5 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKLLSHC*LLLQLF
Trigger: AAAAAGTTGTAGAAGCAACAAACAGTGTGACAGCAG...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR CAA 90 bp AAACCAACTTGGTTGTTATTGGACACTTGGTGGGTGAAGCATCTTCAATTTCTATTGTTGATAAGTCATTaGTTGCTGTTGCTGCTGATT +
Preference number: 5 (lower is better)
Translates to: KPTWLLLDTWWVKHLQFLLLISH*LLLLLI
Trigger: AATCAGCAGCAACAGCAACAAATGACTTATCAACAA...TAGAAATTGAAGATGCTTCACCCACCAAGTGTCCAATAACAACCAAGTTGGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR CAA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACACCCAGTGTTGCTTGTaGATAAGTCATTTGTTGCTG +
Preference number: 5 (lower is better)
Translates to: KQFEISSVLSVCKKILGNTQCCL*ISHLLL
Trigger: CAGCAACAAATGACTTATCAACAAGCAACACTGGGT...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR CAA 90 bp GAAATCAGATACCCTTATGCCCATTATTCCAAAATTCCATGCACTATACCATGCGCAGAATCTGAATATTaGTGTCCACAATTAAGCTCT +
Preference number: 5 (lower is better)
Translates to: EIRYPYAHYSKIPCTIPCAESEY*CPQLSS
Trigger: AGAGCTTAATTGTGGACACAAATATTCAGATTCTGC...GCATGGTATAGTGCATGGAATTTTGGAATAATGGGCATAAGGGTATCTGATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493470.2
CDS GCA 90 bp ATGGAGCTCCCGTTCAATCATTCTAACTACCATGTAGTATTCCACTaGATGAATACACTATCATTTATTAGTTCTCCTCATAGACATCTA +
Preference number: 5 (lower is better)
Translates to: MELPFNHSNYHVVFH*MNTLSFISSPHRHL
Trigger: TAGATGTCTATGAGGAGAACTAATAAATGATAGTGTATTCATGCAGTGGAATACTACATGGTAGTTAGAATGATTGAACGGGAGCTCCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623706.3
CDS-3UTR CAA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAAGATTTTATCTGTGTTTaGATTCATTGCAAGTCGTGG +
Preference number: 5 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKDFICV*IHCKSW
Trigger: CCACGACTTGCAATGAATCAAAACACAGATAAAATC...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR CAA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAATTGGTATTTTTCTCTTaGTTTACAGCATCCATCGCT +
Preference number: 5 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKLVFFS*FTASIA
Trigger: AGCGATGGATGCTGTAAACAAAGAGAAAAATACCAA...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR CAA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACCACCGGTACTTTTATTaGTTCTTTGTTCCTCTGTTG +
Preference number: 5 (lower is better)
Translates to: KQFEISSVLSVCKKILGNHRYFY*FFVPLL
Trigger: CAACAGAGGAACAAAGAACAAATAAAAGTACCGGTG...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR CAA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAAAGACTCAGACTGGGTTaGTCGTTTCTTTTTAGAAAT +
Preference number: 5 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKRLRLG*SFLFRN
Trigger: ATTTCTAAAAAGAAACGACAAACCCAGTCTGAGTCT...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR CAA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAATTTCTCTTTTTCTCCTaGACAATGACTGCCTTCTTT +
Preference number: 5 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKFLFFS*TMTAFF
Trigger: AAAGAAGGCAGTCATTGTCAAGGAGAAAAAGAGAAA...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR CAA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAATCTAAAAGCATCTTCTaGGCAATTCTATTCTCAGGA +
Preference number: 5 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKSKSIF*AILFSG
Trigger: TCCTGAGAATAGAATTGCCAAGAAGATGCTTTTAGA...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR CAA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAATCCTCAGAATTACTCTaGTTTTCACTGGATGAATCT +
Preference number: 5 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKSSELL*FSLDES
Trigger: AGATTCATCCAGTGAAAACAAGAGTAATTCTGAGGA...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR CAA 90 bp ACTTTATCCCCAATTTCCTCTGCCATTCGAAGAATTTCAAAGAGAAGTACCATTTCCTCAGAATTACTCTaGTTTTCACTGGATGAATCT +
Preference number: 5 (lower is better)
Translates to: TLSPISSAIRRISKRSTISSELL*FSLDES
Trigger: AGATTCATCCAGTGAAAACAAGAGTAATTCTGAGGA...AATGGTACTTCTCTTTGAAATTCTTCGAATGGCAGAGGAAATTGGGGATAAAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480283.5
CDS-3UTR CAA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAATCATCTAAAACCAACTaGGTTGTTATTGGACACTTG +
Preference number: 5 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKSSKTN*VVIGHL
Trigger: CAAGTGTCCAATAACAACCAAGTTGGTTTTAGATGA...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR CAA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACCTGAACACCATCTACTaGATGGGGTTTCAATTTGAT +
Preference number: 5 (lower is better)
Translates to: KQFEISSVLSVCKKILGNLNTIY*MGFQFD
Trigger: ATCAAATTGAAACCCCATCAAGTAGATGGTGTTCAG...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR CAA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACGTGCTGAAATCCAGTTaGTCACACAAAAGAACTGTA +
Preference number: 5 (lower is better)
Translates to: KQFEISSVLSVCKKILGNVLKSS*SHKRTV
Trigger: TACAGTTCTTTTGTGTGACAAACTGGATTTCAGCAC...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR CAA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAACTTCACATTCCTTCCTaGAGCAAGATTTCTATACAT +
Preference number: 5 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKLHIPS*SKISIH
Trigger: ATGTATAGAAATCTTGCTCAAGGAAGGAATGTGAAG...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR CAA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAAAAAGAAACAGAAGGATaGTTTCCTGTTTCATCCACA +
Preference number: 5 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKKETEG*FPVSST
Trigger: TGTGGATGAAACAGGAAACAATCCTTCTGTTTCTTT...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
37% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR CAA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAAATAAACAGGCTTAGTTaGTCCAAAGCGATAAACTCT +
Preference number: 5 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKINRLS*SKAINS
Trigger: AGAGTTTATCGCTTTGGACAAACTAAGCCTGTTTAT...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR CAA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAAAACTCTTCTTCTTCTTaGTGGTCCAAAAGAGAATCA +
Preference number: 5 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKNSSSS*WSKRES
Trigger: TGATTCTCTTTTGGACCACAAAGAAGAAGAAGAGTT...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR CAA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACAACTTTTTCTCTTCCTaGATTAATGAGGTCCTCCAG +
Preference number: 5 (lower is better)
Translates to: KQFEISSVLSVCKKILGNNFFSS*INEVLQ
Trigger: CTGGAGGACCTCATTAATCAAGGAAGAGAAAAAGTT...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR CAA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACCTGTCACACTGTTTGTaGCTTCTACAACTTTTTCTC +
Preference number: 5 (lower is better)
Translates to: KQFEISSVLSVCKKILGNLSHCL*LLQLFL
Trigger: GAGAAAAAGTTGTAGAAGCAACAAACAGTGTGACAG...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR CAA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACCTGCTGTCACACTGTTaGTTGCTTCTACAACTTTTT +
Preference number: 5 (lower is better)
Translates to: KQFEISSVLSVCKKILGNLLSHC*LLLQLF
Trigger: AAAAAGTTGTAGAAGCAACAAACAGTGTGACAGCAG...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR CAA 90 bp GAGAGGAAATCTGTGGAGTTGTTACTATTATGGAAGGACTTGTTTTCACTGAAATTGTTGATAAGTCATTaGTTGCTGTTGCTGCTGATT +
Preference number: 5 (lower is better)
Translates to: ERKSVELLLLWKDLFSLKLLISH*LLLLLI
Trigger: AATCAGCAGCAACAGCAACAAATGACTTATCAACAA...TTTCAGTGAAAACAAGTCCTTCCATAATAGTAACAACTCCACAGATTTCCTCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR CAA 90 bp ATCTCTCTTTTTGTTTCTTCTCAACAGGCCTTAATAAATAGGACCACCATATTGAGTGCAAGAAAGTATTaGTATCCCCATCATGACTAC +
Preference number: 5 (lower is better)
Translates to: ISLFVSSQQALINRTTILSARKY*YPHHDY
Trigger: GTAGTCATGATGGGGATACAAATACTTTCTTGCACT...CAATATGGTGGTCCTATTTATTAAGGCCTGTTGAGAAGAAACAAAAAGAGAGAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493470.2
CDS TCA 90 bp AAACCACACGGGTCCACTTATACAGACTTTGTTTCAACCAAATGTTaGTTGAAAATACAGTATTCACAGAATGTGAAACCTATGTTTGAC +
Preference number: 5 (lower is better)
Translates to: KPHGSTYTDFVSTKC*LKIQYSQNVKPMFD
Trigger: GTCAAACATAGGTTTCACATTCTGTGAATACTGTATTTTCAATCAACATTTGGTTGAAACAAAGTCTGTATAAGTGGACCCGTGTGGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675908.1
CDS-3UTR CAA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACGATTTTATCTGTGTTTaGATTCATTGCAAGTCGTGG +
Preference number: 5 (lower is better)
Translates to: KQFEISSVLSVCKKILGNDFICV*IHCKSW
Trigger: CCACGACTTGCAATGAATCAAAACACAGATAAAATC...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR CAA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACAGACTCAGACTGGGTTaGTCGTTTCTTTTTAGAAAT +
Preference number: 5 (lower is better)
Translates to: KQFEISSVLSVCKKILGNRLRLG*SFLFRN
Trigger: ATTTCTAAAAAGAAACGACAAACCCAGTCTGAGTCT...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR CAA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACTTTCTCTTTTTCTCCTaGACAATGACTGCCTTCTTT +
Preference number: 5 (lower is better)
Translates to: KQFEISSVLSVCKKILGNFLFFS*TMTAFF
Trigger: AAAGAAGGCAGTCATTGTCAAGGAGAAAAAGAGAAA...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR CAA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACTCTAAAAGCATCTTCTaGGCAATTCTATTCTCAGGA +
Preference number: 5 (lower is better)
Translates to: KQFEISSVLSVCKKILGNSKSIF*AILFSG
Trigger: TCCTGAGAATAGAATTGCCAAGAAGATGCTTTTAGA...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR CAA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACTCCTCAGAATTACTCTaGTTTTCACTGGATGAATCT +
Preference number: 5 (lower is better)
Translates to: KQFEISSVLSVCKKILGNSSELL*FSLDES
Trigger: AGATTCATCCAGTGAAAACAAGAGTAATTCTGAGGA...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
CDS-3UTR CAA 90 bp CTGAACACCATCTACTTGATGGGGTTTCAATTTGATAACCATATTTCTATGAACTCATCTAAAACCAACTaGGTTGTTATTGGACACTTG +
Preference number: 5 (lower is better)
Translates to: LNTIYLMGFQFDNHISMNSSKTN*VVIGHL
Trigger: CAAGTGTCCAATAACAACCAAGTTGGTTTTAGATGA...GTTCATAGAAATATGGTTATCAAATTGAAACCCCATCAAGTAGATGGTGTTCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480283.5
ENST00000623242.3
CDS-3UTR CAA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACCTTCACATTCCTTCCTaGAGCAAGATTTCTATACAT +
Preference number: 5 (lower is better)
Translates to: KQFEISSVLSVCKKILGNLHIPS*SKISIH
Trigger: ATGTATAGAAATCTTGCTCAAGGAAGGAATGTGAAG...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS-3UTR CAA 90 bp AAACAATTTGAAATATCTTCTGTACTCAGCGTGTGTAAGAAGATTCTAGGCAACAACTCTTCTTCTTCTTaGTGGTCCAAAAGAGAATCA +
Preference number: 5 (lower is better)
Translates to: KQFEISSVLSVCKKILGNNSSSS*WSKRES
Trigger: TGATTCTCTTTTGGACCACAAAGAAGAAGAAGAGTT...GTTGCCTAGAATCTTCTTACACACGCTGAGTACAGAAGATATTTCAAATTGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000675732.1
CDS GCA 72 bp ACCGCCGCAGGAGCCGCGGAAACAAAGCGACACCGCTaGCGCCGCCATTTTGTTGGGCCGAGGCTCAGGCAG +
Preference number: 6 (lower is better)
Translates to: TAAGAAETKRHR*RRHFVGPRLRQ
Trigger: CTGCCTGAGCCTCGGCCCAACAAAATGGCGGCGGCAGCGGTGTCGCTTTGTTTCCGCGGCTCCTGCGGCGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622960.1
CDS CCA 72 bp CGAACGCCTTCCCAAACACCCGACTCAGACGGTGCCTaGGCCCAGACCGCTGGGGCCCATGAGACGGGGTTG +
Preference number: 6 (lower is better)
Translates to: RTPSQTPDSDGA*AQTAGAHETGL
Trigger: CAACCCCGTCTCATGGGCCCCAGCGGTCTGGGCCCAGGCACCGTCTGAGTCGGGTGTTTGGGAAGGCGTTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622960.1
CDS GCA 72 bp CGCCTTGTCGGCTTCTGTGATTGCTGGGCGCCGATCTaGGCTCCCCCGCGCCCGGTTACGATAGAAATGCAC +
Preference number: 6 (lower is better)
Translates to: RLVGFCDCWAPI*APPRPVTIEMH
Trigger: GTGCATTTCTATCGTAACCGGGCGCGGGGGAGCGCAGATCGGCGCCCAGCAATCACAGAAGCCGACAAGGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000622960.1
ENST00000623321.3
ENST00000624032.3
ENST00000624166.3
ENST00000624193.1
ENST00000624668.3
CDS CCA 72 bp TTTTCGCTTGAACGCCTTGTCGGCTTCTGTGATTGCTaGGCGCCGATCTGCGCTCCCCCGCGCCCGGTTACG +
Preference number: 6 (lower is better)
Translates to: FSLERLVGFCDC*APICAPPRPVT
Trigger: CGTAACCGGGCGCGGGGGAGCGCAGATCGGCGCCCAGCAATCACAGAAGCCGACAAGGCGTTCAAGCGAAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000622960.1
ENST00000623321.3
ENST00000624032.3
ENST00000624166.3
ENST00000624193.1
ENST00000624668.3
CDS GCA 72 bp ATGTTTTCGCTTGAACGCCTTGTCGGCTTCTGTGATTaGTGGGCGCCGATCTGCGCTCCCCCGCGCCCGGTT +
Preference number: 6 (lower is better)
Translates to: MFSLERLVGFCD*WAPICAPPRPV
Trigger: AACCGGGCGCGGGGGAGCGCAGATCGGCGCCCAGCAATCACAGAAGCCGACAAGGCGTTCAAGCGAAAACAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000622960.1
ENST00000623321.3
ENST00000624032.3
ENST00000624166.3
ENST00000624193.1
ENST00000624668.3
CDS CAA 90 bp TGCTTTCACTCATGGGCTCAGCGGTCATGTTTTCGCTTGAACGCCTaGTCGGCTTCTGTGATTGCTGGGCGCCGATCTGCGCTCCCCCGC +
Preference number: 6 (lower is better)
Translates to: CFHSWAQRSCFRLNA*SASVIAGRRSALPR
Trigger: GCGGGGGAGCGCAGATCGGCGCCCAGCAATCACAGAAGCCGACAAGGCGTTCAAGCGAAAACATGACCGCTGAGCCCATGAGTGAAAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000624032.3
ENST00000624166.3
ENST00000624193.1
CDS CCA 72 bp TGCGCTCCCCCGCGCCCGGTTACGATAGAAATGCACTaGAGTCTTAGTCGTCACTGTAGCTGCTGCTGGAAC +
Preference number: 6 (lower is better)
Translates to: CAPPRPVTIEMH*SLSRHCSCCWN
Trigger: GTTCCAGCAGCAGCTACAGTGACGACTAAGACTCCAGTGCATTTCTATCGTAACCGGGCGCGGGGGAGCGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000622960.1
ENST00000623321.3
ENST00000624032.3
ENST00000624166.3
ENST00000624193.1
ENST00000624668.3
CDS CAA 72 bp TCATGGGCTCAGCGGTCATGTTTTCGCTTGAACGCCTaGTCGGCTTCTGTGATTGCTGGGCGCCGATCTGCG +
Preference number: 6 (lower is better)
Translates to: SWAQRSCFRLNA*SASVIAGRRSA
Trigger: CGCAGATCGGCGCCCAGCAATCACAGAAGCCGACAAGGCGTTCAAGCGAAAACATGACCGCTGAGCCCATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000622960.1
ENST00000623321.3
ENST00000624032.3
ENST00000624166.3
ENST00000624193.1
ENST00000624668.3
CDS GCA 72 bp GAAATGCACTGGAGTCTTAGTCGTCACTGTAGCTGCTaGTGGAACCTCCCCACAGCTCAAAGGCCGCTACCA +
Preference number: 6 (lower is better)
Translates to: EMHWSLSRHCSC*WNLPTAQRPLP
Trigger: TGGTAGCGGCCTTTGAGCTGTGGGGAGGTTCCAGCAGCAGCTACAGTGACGACTAAGACTCCAGTGCATTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000622960.1
ENST00000623321.3
ENST00000624032.3
ENST00000624166.3
ENST00000624193.1
ENST00000624668.3
CDS CAA 72 bp TGCTTTCACTCATGGGCTCAGCGGTCATGTTTTCGCTaGAACGCCTTGTCGGCTTCTGTGATTGCTGGGCGC +
Preference number: 6 (lower is better)
Translates to: CFHSWAQRSCFR*NALSASVIAGR
Trigger: GCGCCCAGCAATCACAGAAGCCGACAAGGCGTTCAAGCGAAAACATGACCGCTGAGCCCATGAGTGAAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000624032.3
ENST00000624166.3
ENST00000624193.1
CDS CAA 72 bp CGTTTTACCTCATGGGCTCAGCGGTCATGTTTTCGCTaGAACGCCTTGTCGGCTTCTGTGATTGCTGGGCGC +
Preference number: 6 (lower is better)
Translates to: RFTSWAQRSCFR*NALSASVIAGR
Trigger: GCGCCCAGCAATCACAGAAGCCGACAAGGCGTTCAAGCGAAAACATGACCGCTGAGCCCATGAGGTAAAACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622960.1
CDS CAA 90 bp TATTCAACTTGCTTTCACTCATGGGCTCAGCGGTCATGTTTTCGCTaGAACGCCTTGTCGGCTTCTGTGATTGCTGGGCGCCGATCTGCG +
Preference number: 6 (lower is better)
Translates to: YSTCFHSWAQRSCFR*NALSASVIAGRRSA
Trigger: CGCAGATCGGCGCCCAGCAATCACAGAAGCCGACAAGGCGTTCAAGCGAAAACATGACCGCTGAGCCCATGAGTGAAAGCAAGTTGAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000624032.3
ENST00000624166.3
ENST00000624193.1
CDS CAA 90 bp AGAACCACTGATTTTATCTCATGGGCTCAGCGGTCATGTTTTCGCTaGAACGCCTTGTCGGCTTCTGTGATTGCTGGGCGCCGATCTGCG +
Preference number: 6 (lower is better)
Translates to: RTTDFISWAQRSCFR*NALSASVIAGRRSA
Trigger: CGCAGATCGGCGCCCAGCAATCACAGAAGCCGACAAGGCGTTCAAGCGAAAACATGACCGCTGAGCCCATGAGATAAAATCAGTGGTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623321.3
ENST00000624668.3
CDS CAA 72 bp GATTTTATCTCATGGGCTCAGCGGTCATGTTTTCGCTaGAACGCCTTGTCGGCTTCTGTGATTGCTGGGCGC +
Preference number: 6 (lower is better)
Translates to: DFISWAQRSCFR*NALSASVIAGR
Trigger: GCGCCCAGCAATCACAGAAGCCGACAAGGCGTTCAAGCGAAAACATGACCGCTGAGCCCATGAGATAAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623321.3
ENST00000624668.3
CDS CAA 90 bp GAGCGAGTCTTTCTAAGGCAGGCACTCCTGGTTTTTACAACCTGCTaGCTGTTCCGTTGCTGCTGTTTGTGCCCATGCCTAGGGTGTGTT +
Preference number: 6 (lower is better)
Translates to: ERVFLRQALLVFTTC*LFRCCCLCPCLGCV
Trigger: AACACACCCTAGGCATGGGCACAAACAGCAGCAACGGAACAGCAAGCAGGTTGTAAAAACCAGGAGTGCCTGCCTTAGAAAGACTCGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493470.2
CDS GCA 72 bp GTCTTTCTAAGGCAGGCACTCCTGGTTTTTACAACCTaGTTGCTGTTCCGTTGCTGCTGTTTGTGCCCATGC +
Preference number: 6 (lower is better)
Translates to: VFLRQALLVFTT*LLFRCCCLCPC
Trigger: GCATGGGCACAAACAGCAGCAACGGAACAGCAAGCAGGTTGTAAAAACCAGGAGTGCCTGCCTTAGAAAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493470.2
CDS GCA 72 bp GCACTCCTGGTTTTTACAACCTGCTTGCTGTTCCGTTaGTGCTGTTTGTGCCCATGCCTAGGGTGTGTTATA +
Preference number: 6 (lower is better)
Translates to: ALLVFTTCLLFR*CCLCPCLGCVI
Trigger: TATAACACACCCTAGGCATGGGCACAAACAGCAGCAACGGAACAGCAAGCAGGTTGTAAAAACCAGGAGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493470.2
CDS GCA 72 bp CTCCTGGTTTTTACAACCTGCTTGCTGTTCCGTTGCTaGTGTTTGTGCCCATGCCTAGGGTGTGTTATAATC +
Preference number: 6 (lower is better)
Translates to: LLVFTTCLLFRC*CLCPCLGCVII
Trigger: GATTATAACACACCCTAGGCATGGGCACAAACAGCAGCAACGGAACAGCAAGCAGGTTGTAAAAACCAGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493470.2
CDS CAA 72 bp TTGTCTTTTGGAACTGATGGCCTTCCCTGTGTGTTTTaGGGCTCACAACATGTAGCCTCCTACATTCTGCCC +
Preference number: 6 (lower is better)
Translates to: LSFGTDGLPCVF*GSQHVASYILP
Trigger: GGGCAGAATGTAGGAGGCTACATGTTGTGAGCCCAAAAACACACAGGGAAGGCCATCAGTTCCAAAAGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623706.3
CDS CCA 72 bp ATGCAGGTTCTGCGGGATTTGTGTATGAGCAAATTTTaGTATACACAGGCAGGTCCTAGAACCAATCCCCCA +
Preference number: 6 (lower is better)
Translates to: MQVLRDLCMSKF*YTQAGPRTNPP
Trigger: TGGGGGATTGGTTCTAGGACCTGCCTGTGTATACCAAAATTTGCTCATACACAAATCCCGCAGAACCTGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675908.1
CDS TCA 72 bp TTTTCTGGCCTTTCTTTCAAACTTGCAGGAAGACTGTaGGCGAGTCTTTCTAAGGCAGGCACTCCTGGTTTT +
Preference number: 6 (lower is better)
Translates to: FSGLSFKLAGRL*ASLSKAGTPGF
Trigger: AAAACCAGGAGTGCCTGCCTTAGAAAGACTCGCTCACAGTCTTCCTGCAAGTTTGAAAGAAAGGCCAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493470.2
CDS CCA 72 bp GCTCTTACCTGTAAAGTCTTACCAAGGCCCATACAGTaGGCAAGAATGCATCCTGAACCTGGAGATTTCTTT +
Preference number: 6 (lower is better)
Translates to: ALTCKVLPRPIQ*ARMHPEPGDFF
Trigger: AAAGAAATCTCCAGGTTCAGGATGCATTCTTGCCCACTGTATGGGCCTTGGTAAGACTTTACAGGTAAGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460639.2
CDS GCA 72 bp ACCTGCTTGCTGTTCCGTTGCTGCTGTTTGTGCCCATaGCTAGGGTGTGTTATAATCTTTTTAAAGTCCTTA +
Preference number: 6 (lower is better)
Translates to: TCLLFRCCCLCP*LGCVIIFLKSL
Trigger: TAAGGACTTTAAAAAGATTATAACACACCCTAGGCATGGGCACAAACAGCAGCAACGGAACAGCAAGCAGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493470.2
CDS CAA 72 bp GAAGGTTTCCTCTTTGATCGTGACGATCCTGAAGACTaGGATTTTTCTGAAGAGCTAGTTCCCTCTTCCTTG +
Preference number: 6 (lower is better)
Translates to: EGFLFDRDDPED*DFSEELVPSSL
Trigger: CAAGGAAGAGGGAACTAGCTCTTCAGAAAAATCCAAGTCTTCAGGATCGTCACGATCAAAGAGGAAACCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000622960.1
ENST00000623321.3
ENST00000624032.3
ENST00000624166.3
ENST00000624668.3
CDS CAA 72 bp TCTGAAGAAAAACATGATGCAAAACAGGGTACTAAGTaGTTCACTGCTGTACCTGGGCTGGCTATCTCTGGA +
Preference number: 6 (lower is better)
Translates to: SEEKHDAKQGTK*FTAVPGLAISG
Trigger: TCCAGAGATAGCCAGCCCAGGTACAGCAGTGAACAACTTAGTACCCTGTTTTGCATCATGTTTTTCTTCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623706.3
CDS GCA 72 bp TTTACAACCTGCTTGCTGTTCCGTTGCTGCTGTTTGTaGCCATGCCTAGGGTGTGTTATAATCTTTTTAAAG +
Preference number: 6 (lower is better)
Translates to: FTTCLLFRCCCL*PCLGCVIIFLK
Trigger: CTTTAAAAAGATTATAACACACCCTAGGCATGGGCACAAACAGCAGCAACGGAACAGCAAGCAGGTTGTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493470.2
CDS CAA 72 bp TGGTTAAGGTCATATATCTCCAGAGTGATTCTACATTaGCTTCTACCAGGTCTCCAGGGAATCACCAACTCA +
Preference number: 6 (lower is better)
Translates to: WLRSYISRVILH*LLPGLQGITNS
Trigger: TGAGTTGGTGATTCCCTGGAGACCTGGTAGAAGCAAATGTAGAATCACTCTGGAGATATATGACCTTAACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623706.3
CDS CAA 72 bp AGGAAGGAGATGCCAAATAAGAGAACAAGCAAGAGATaGACTCTGAGAGAGTGCAAGTGTAAGAGACAAACC +
Preference number: 6 (lower is better)
Translates to: RKEMPNKRTSKR*TLRECKCKRQT
Trigger: GGTTTGTCTCTTACACTTGCACTCTCTCAGAGTCAATCTCTTGCTTGTTCTCTTATTTGGCATCTCCTTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623706.3
CDS CAA 72 bp TCTGAAGAAAAACATGATGCAAAACAGGGTACTAAGTaGTTCACTGCTGTACCTGGGCTGGCTATCTTACAG +
Preference number: 6 (lower is better)
Translates to: SEEKHDAKQGTK*FTAVPGLAILQ
Trigger: CTGTAAGATAGCCAGCCCAGGTACAGCAGTGAACAACTTAGTACCCTGTTTTGCATCATGTTTTTCTTCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637959.1
CDS CAA 90 bp GTTACAATTGAAGGTTTCCTCTTTGATCGTGACGATCCTGAAGACTaGGATTTTTCTGAAGAGCTAGTTCCCTCTTCCTTGCTGTTTTCC +
Preference number: 6 (lower is better)
Translates to: VTIEGFLFDRDDPED*DFSEELVPSSLLFS
Trigger: GGAAAACAGCAAGGAAGAGGGAACTAGCTCTTCAGAAAAATCCAAGTCTTCAGGATCGTCACGATCAAAGAGGAAACCTTCAATTGTAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000623321.3
ENST00000624032.3
ENST00000624166.3
ENST00000624668.3
CDS CAA 90 bp GTGAAACCTATGTTTGACTTTTCATATATGCAGGTTCTGCGGGATTaGTGTATGAGCAAATTTTGGTATACACAGGCAGGTCCTAGAACC +
Preference number: 6 (lower is better)
Translates to: VKPMFDFSYMQVLRD*CMSKFWYTQAGPRT
Trigger: GGTTCTAGGACCTGCCTGTGTATACCAAAATTTGCTCATACACAAATCCCGCAGAACCTGCATATATGAAAAGTCAAACATAGGTTTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675908.1
CDS TCA 72 bp TCTTCAGATTCTTCTGATGAGTGTGCAAGGAAGTCATaGAGCTTCTGCACCAATGTATTCAACTTGCTTTCA +
Preference number: 6 (lower is better)
Translates to: SSDSSDECARKS*SFCTNVFNLLS
Trigger: TGAAAGCAAGTTGAATACATTGGTGCAGAAGCTTCATGACTTCCTTGCACACTCATCAGAAGAATCTGAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000622960.1
ENST00000624032.3
ENST00000624166.3
ENST00000624193.1
CDS TCA 72 bp CTGTTAAAACTTCGGATGAAGCTGAAGCCTAATATATaGTCCTACATGATCCCATTCTCTTTCCTTCCTTCC +
Preference number: 6 (lower is better)
Translates to: LLKLRMKLKPNI*SYMIPFSFLPS
Trigger: GGAAGGAAGGAAAGAGAATGGGATCATGTAGGATCATATATTAGGCTTCAGCTTCATCCGAAGTTTTAACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623706.3
CDS TCA 72 bp ACTTTTCATATATGCAGGTTCTGCGGGATTTGTGTATaGGCAAATTTTGGTATACACAGGCAGGTCCTAGAA +
Preference number: 6 (lower is better)
Translates to: TFHICRFCGICV*ANFGIHRQVLE
Trigger: TTCTAGGACCTGCCTGTGTATACCAAAATTTGCTCATACACAAATCCCGCAGAACCTGCATATATGAAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675908.1
CDS TCA 72 bp CCCAGATTCGGGTATCTATCATTCTATCTACCTCCATaGGGTCAACTCAAAAGAGTAGAGCTTAACATTTAT +
Preference number: 6 (lower is better)
Translates to: PRFGYLSFYLPP*GQLKRVELNIY
Trigger: ATAAATGTTAAGCTCTACTCTTTTGAGTTGACCTCATGGAGGTAGATAGAATGATAGATACCCGAATCTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675908.1
CDS GCA 72 bp TCCAGAACCACTGATTTTATCTGTGTTTTGATTCATTaGAAGTCGTGGAGGAGAACTTGTTTCTTCAGATTC +
Preference number: 6 (lower is better)
Translates to: SRTTDFICVLIH*KSWRRTCFFRF
Trigger: GAATCTGAAGAAACAAGTTCTCCTCCACGACTTGCAATGAATCAAAACACAGATAAAATCAGTGGTTCTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000373344.11
ENST00000395603.7
ENST00000480283.5
ENST00000622960.1
ENST00000624032.3
ENST00000624166.3
CDS GCA 72 bp GGAGTGCATGTGATATTTTGTTACATGCATAGAATATaGAATGATCAAGTCAGGGTATTCAGGGTATCCATC +
Preference number: 6 (lower is better)
Translates to: GVHVIFCYMHRI*NDQVRVFRVSI
Trigger: GATGGATACCCTGAATACCCTGACTTGATCATTGCATATTCTATGCATGTAACAAAATATCACATGCACTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675908.1
CDS CAA 72 bp ATGTTTGACTTTTCATATATGCAGGTTCTGCGGGATTaGTGTATGAGCAAATTTTGGTATACACAGGCAGGT +
Preference number: 6 (lower is better)
Translates to: MFDFSYMQVLRD*CMSKFWYTQAG
Trigger: ACCTGCCTGTGTATACCAAAATTTGCTCATACACAAATCCCGCAGAACCTGCATATATGAAAAGTCAAACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675908.1
CDS CAA 90 bp TTTTTAAAGTCCTTACAGATGGAATCATACCTATTCTCAGGATCATaGTCGTCATCATCATCATCCACTGTGACAGGCACTGATTTAGAT +
Preference number: 6 (lower is better)
Translates to: FLKSLQMESYLFSGS*SSSSSSTVTGTDLD
Trigger: ATCTAAATCAGTGCCTGTCACAGTGGATGATGATGATGACGACAATGATCCTGAGAATAGGTATGATTCCATCTGTAAGGACTTTAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493470.2
CDS TCA 72 bp AACTACATTAATTCACCGACTGATTCCTTTGTGCTCTaGACAAACCACATTTTACAACATCATGTTGGTTCA +
Preference number: 6 (lower is better)
Translates to: NYINSPTDSFVL*TNHILQHHVGS
Trigger: TGAACCAACATGATGTTGTAAAATGTGGTTTGTTCAGAGCACAAAGGAATCAGTCGGTGAATTAATGTAGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623706.3
CDS GCA 72 bp TCTTGTTCACTGCTTTATCTTCAGCCCCTACGACTGTaGCTGAAACATAATAGAATCCAATATATATTAATG +
Preference number: 6 (lower is better)
Translates to: SCSLLYLQPLRL*LKHNRIQYILM
Trigger: CATTAATATATATTGGATTCTATTATGTTTCAGGCACAGTCGTAGGGGCTGAAGATAAAGCAGTGAACAAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460639.2
CDS GCA 72 bp CCGTTCAATCATTCTAACTACCATGTAGTATTCCACTaGATGAATACACTATCATTTATTAGTTCTCCTCAT +
Preference number: 6 (lower is better)
Translates to: PFNHSNYHVVFH*MNTLSFISSPH
Trigger: ATGAGGAGAACTAATAAATGATAGTGTATTCATGCAGTGGAATACTACATGGTAGTTAGAATGATTGAACGG
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623706.3
CDS GCA 72 bp ATTCAAACTACATTAATTCACCGACTGATTCCTTTGTaGTCTGAACAAACCACATTTTACAACATCATGTTG +
Preference number: 6 (lower is better)
Translates to: IQTTLIHRLIPL*SEQTTFYNIML
Trigger: CAACATGATGTTGTAAAATGTGGTTTGTTCAGAGCACAAAGGAATCAGTCGGTGAATTAATGTAGTTTGAAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623706.3