RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ATP2B4 (Homo sapiens)

Ensembl gene IDs: ENSG00000058668

Ensembl transcript IDs: ENST00000341360.6, ENST00000356729.5, ENST00000357681.10, ENST00000367218.7, ENST00000458092.5, ENST00000466407.1, ENST00000484746.1

Found 1034 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCTCTCCCAAGGCTTCTGAACACTCATTCCCCACCAGTCAGGTCCTaGCCTGGAGAGCCTTGGCAGATGGCTTTGAAAGCAGTGGTCACC +
Preference number: 1 (lower is better)
Translates to: PLPRLLNTHSPPVRS*PGEPWQMALKAVVT
Trigger: GGTGACCACTGCTTTCAAAGCCATCTGCCAAGGCTCTCCAGGGCAGGACCTGACTGGTGGGGAATGAGTGTTCAGAAGCCTTGGGAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR CCA 90 bp CTGAACACTCATTCCCCACCAGTCAGGTCCTGCCCTGGAGAGCCTTaGCAGATGGCTTTGAAAGCAGTGGTCACCCCAAAGAGGAGCCCA +
Preference number: 1 (lower is better)
Translates to: LNTHSPPVRSCPGEP*QMALKAVVTPKRSP
Trigger: TGGGCTCCTCTTTGGGGTGACCACTGCTTTCAAAGCCATCTGCCAAGGCTCTCCAGGGCAGGACCTGACTGGTGGGGAATGAGTGTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR CCA 90 bp CCCAAGGCTTCTGAACACTCATTCCCCACCAGTCAGGTCCTGCCCTaGAGAGCCTTGGCAGATGGCTTTGAAAGCAGTGGTCACCCCAAA +
Preference number: 1 (lower is better)
Translates to: PKASEHSFPTSQVLP*RALADGFESSGHPK
Trigger: TTTGGGGTGACCACTGCTTTCAAAGCCATCTGCCAAGGCTCTCCAGGGCAGGACCTGACTGGTGGGGAATGAGTGTTCAGAAGCCTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR TCA 90 bp TCTCAGATCATGCTAGAATGGCTCTTTGGCCTCTCCCAAGGCTTCTaGACACTCATTCCCCACCAGTCAGGTCCTGCCCTGGAGAGCCTT +
Preference number: 1 (lower is better)
Translates to: SQIMLEWLFGLSQGF*TLIPHQSGPALESL
Trigger: AAGGCTCTCCAGGGCAGGACCTGACTGGTGGGGAATGAGTGTTCAGAAGCCTTGGGAGAGGCCAAAGAGCCATTCTAGCATGATCTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR GCA 90 bp GTCGAAGCTGGTCCCCAGGCACCTAAGCTCAAGGTTTCTGGCCTCTaGAGGAAGGTTTTCTCAGATCATGCTAGAATGGCTCTTTGGCCT +
Preference number: 1 (lower is better)
Translates to: VEAGPQAPKLKVSGL*RKVFSDHARMALWP
Trigger: AGGCCAAAGAGCCATTCTAGCATGATCTGAGAAAACCTTCCTGCAGAGGCCAGAAACCTTGAGCTTAGGTGCCTGGGGACCAGCTTCGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR CCA 90 bp GGCCTCTGCAGGAAGGTTTTCTCAGATCATGCTAGAATGGCTCTTTaGCCTCTCCCAAGGCTTCTGAACACTCATTCCCCACCAGTCAGG +
Preference number: 1 (lower is better)
Translates to: GLCRKVFSDHARMAL*PLPRLLNTHSPPVR
Trigger: CCTGACTGGTGGGGAATGAGTGTTCAGAAGCCTTGGGAGAGGCCAAAGAGCCATTCTAGCATGATCTGAGAAAACCTTCCTGCAGAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR CCA 90 bp GTCTCTAGGCTCTGTAGAGAGCTGTCCGACTGGGGGAGCTGCACTTaGTTGCAATCCACCGCATTGTTGTTTGTATTGGCGAATTCAGGG +
Preference number: 1 (lower is better)
Translates to: VSRLCRELSDWGSCT*LQSTALLFVLANSG
Trigger: CCCTGAATTCGCCAATACAAACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCCCCAGTCGGACAGCTCTCTACAGAGCCTAGAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484746.1
3UTR GCA 90 bp GGCTTTGAAAGCAGTGGTCACCCCAAAGAGGAGCCCACAAAAGTCTaGTTTGATGGTCTGTCTTGTCCTAGATTTGGCAGCGTCTGGTCC +
Preference number: 1 (lower is better)
Translates to: GFESSGHPKEEPTKV*FDGLSCPRFGSVWS
Trigger: GGACCAGACGCTGCCAAATCTAGGACAAGACAGACCATCAAAGCAGACTTTTGTGGGCTCCTCTTTGGGGTGACCACTGCTTTCAAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR CCA 90 bp GTCTCTAGGCTCTGTAGAGAGCTGTCCGACTGGGGGAGCTGCACTTaGTTGCAATCCACCGCATTGTTGTTTGTATTGGCATATGGAGTG +
Preference number: 1 (lower is better)
Translates to: VSRLCRELSDWGSCT*LQSTALLFVLAYGV
Trigger: CACTCCATATGCCAATACAAACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCCCCAGTCGGACAGCTCTCTACAGAGCCTAGAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
3UTR GCA 90 bp ACTGATGTCTCTAGGCTCTGTAGAGAGCTGTCCGACTGGGGGAGCTaGACTTGGTTGCAATCCACCGCATTGTTGTTTGTATTGGCGAAT +
Preference number: 1 (lower is better)
Translates to: TDVSRLCRELSDWGS*TWLQSTALLFVLAN
Trigger: ATTCGCCAATACAAACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCCCCAGTCGGACAGCTCTCTACAGAGCCTAGAGACATCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484746.1
3UTR CCA 90 bp AAAGTCTGCTTTGATGGTCTGTCTTGTCCTAGATTTGGCAGCGTCTaGTCCTCAATATCCAAGCCCAGTAAGGGGGCAGGGTCATACCCA +
Preference number: 1 (lower is better)
Translates to: KVCFDGLSCPRFGSV*SSISKPSKGAGSYP
Trigger: TGGGTATGACCCTGCCCCCTTACTGGGCTTGGATATTGAGGACCAGACGCTGCCAAATCTAGGACAAGACAGACCATCAAAGCAGACTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR GCA 90 bp ACTGATGTCTCTAGGCTCTGTAGAGAGCTGTCCGACTGGGGGAGCTaGACTTGGTTGCAATCCACCGCATTGTTGTTTGTATTGGCATAT +
Preference number: 1 (lower is better)
Translates to: TDVSRLCRELSDWGS*TWLQSTALLFVLAY
Trigger: ATATGCCAATACAAACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCCCCAGTCGGACAGCTCTCTACAGAGCCTAGAGACATCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
3UTR GCA 90 bp AGAGGAAGAGGCTGGAATGGCTTAACAATAGCAGGCATTTATAAGTaGCCACCCTCACCAATGCATCGGGGGTGGTCCCTAGATATGAAA +
Preference number: 1 (lower is better)
Translates to: RGRGWNGLTIAGIYK*PPSPMHRGWSLDMK
Trigger: TTTCATATCTAGGGACCACCCCCGATGCATTGGTGAGGGTGGGCACTTATAAATGCCTGCTATTGTTAAGCCATTCCAGCCTCTTCCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR CCA 90 bp CTGCACTTGGTTGCAATCCACCGCATTGTTGTTTGTATTGGCATATaGAGTGACCTCACCATCCAACAGGAGCACCCTAGTCCCAAACTT +
Preference number: 1 (lower is better)
Translates to: LHLVAIHRIVVCIGI*SDLTIQQEHPSPKL
Trigger: AAGTTTGGGACTAGGGTGCTCCTGTTGGATGGTGAGGTCACTCCATATGCCAATACAAACAACAATGCGGTGGATTGCAACCAAGTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
3UTR CCA 90 bp ATAGCAGGCATTTATAAGTGCCCACCCTCACCAATGCATCGGGGGTaGTCCCTAGATATGAAAGGTGAGGAAGTCTCTGCATACTGTGAT +
Preference number: 1 (lower is better)
Translates to: IAGIYKCPPSPMHRG*SLDMKGEEVSAYCD
Trigger: ATCACAGTATGCAGAGACTTCCTCACCTTTCATATCTAGGGACCACCCCCGATGCATTGGTGAGGGTGGGCACTTATAAATGCCTGCTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR TCA 90 bp TCTCTTAACCCCTTTAGGGACAGGAGAGTCATTCCAGAGGACAGATaGTACTATGGGAAGGATCTAGCCTTAAGACTGTCACTCAGGGCT +
Preference number: 1 (lower is better)
Translates to: SLNPFRDRRVIPEDR*YYGKDLALRLSLRA
Trigger: AGCCCTGAGTGACAGTCTTAAGGCTAGATCCTTCCCATAGTATCATCTGTCCTCTGGAATGACTCTCCTGTCCCTAAAGGGGTTAAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR CCA 90 bp AAAATTCAAACTGATGTCTCTAGGCTCTGTAGAGAGCTGTCCGACTaGGGGAGCTGCACTTGGTTGCAATCCACCGCATTGTTGTTTGTA +
Preference number: 1 (lower is better)
Translates to: KIQTDVSRLCRELSD*GSCTWLQSTALLFV
Trigger: TACAAACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCCCCAGTCGGACAGCTCTCTACAGAGCCTAGAGACATCAGTTTGAATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000367218.7
ENST00000484746.1
3UTR CCA 90 bp ACTGAACTAAGTGAAAGGGCGTCTGGTCTATTCAGAGGAAGAGGCTaGAATGGCTTAACAATAGCAGGCATTTATAAGTGCCCACCCTCA +
Preference number: 1 (lower is better)
Translates to: TELSERASGLFRGRG*NGLTIAGIYKCPPS
Trigger: TGAGGGTGGGCACTTATAAATGCCTGCTATTGTTAAGCCATTCCAGCCTCTTCCTCTGAATAGACCAGACGCCCTTTCACTTAGTTCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR CCA 90 bp GAGAAAGGCTGGGACCTTCTCAGAGACTGGAAAAGTTGTGACACGTaGCAAAAATTAGAATCAGAAACTGGAGAGAATGTCGAAGCTGGT +
Preference number: 1 (lower is better)
Translates to: EKGWDLLRDWKSCDT*QKLESETGENVEAG
Trigger: ACCAGCTTCGACATTCTCTCCAGTTTCTGATTCTAATTTTTGCCACGTGTCACAACTTTTCCAGTCTCTGAGAAGGTCCCAGCCTTTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR TCA 90 bp GGTAAAAACTGTATACCACACATATGCAACCTTCATGGGCAAGGCTaGTCTCCCTGGCACTTAAGAACCACATACACTTTACAAGATGGC +
Preference number: 1 (lower is better)
Translates to: GKNCIPHICNLHGQG*SPWHLRTTYTLQDG
Trigger: GCCATCTTGTAAAGTGTATGTGGTTCTTAAGTGCCAGGGAGATCAGCCTTGCCCATGAAGGTTGCATATGTGTGGTATACAGTTTTTACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR TCA 90 bp TTGCAAATTATGGCAACACACACTGGACTGGGGTATACGTTGCTTTaGTATCACCATTTGTTTGTTTATGTCATGCAGACCACAATAGTC +
Preference number: 1 (lower is better)
Translates to: LQIMATHTGLGYTLL*YHHLFVYVMQTTIV
Trigger: GACTATTGTGGTCTGCATGACATAAACAAACAAATGGTGATATCAAAGCAACGTATACCCCAGTCCAGTGTGTGTTGCCATAATTTGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR CCA 90 bp TGCACTGTTAAGCTGAATTGCAAATTATGGCAACACACACTGGACTaGGGTATACGTTGCTTTGATATCACCATTTGTTTGTTTATGTCA +
Preference number: 1 (lower is better)
Translates to: CTVKLNCKLWQHTLD*GIRCFDITICLFMS
Trigger: TGACATAAACAAACAAATGGTGATATCAAAGCAACGTATACCCCAGTCCAGTGTGTGTTGCCATAATTTGCAATTCAGCTTAACAGTGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR CCA 90 bp AACAAAGAAACTGGTTGGATTCTGGAACTAAATCAAGGGTTCTTTTaGGCCAAAAGGGAGAAGGATCTAAGTTTACACAATTCATCCATA +
Preference number: 1 (lower is better)
Translates to: NKETGWILELNQGFF*AKREKDLSLHNSSI
Trigger: TATGGATGAATTGTGTAAACTTAGATCCTTCTCCCTTTTGGCCCAAAAGAACCCTTGATTTAGTTCCAGAATCCAACCAGTTTCTTTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR CCA 90 bp ATTGGCTCCAACAAATTATCCCTTTTAAAACTCCTCTTCTTCTTCTaGTCTCAGTGGAACAACACATTTGAATTTCAGATTTGCAGTTTA +
Preference number: 1 (lower is better)
Translates to: IGSNKLSLLKLLFFF*SQWNNTFEFQICSL
Trigger: TAAACTGCAAATCTGAAATTCAAATGTGTTGTTCCACTGAGACCAGAAGAAGAAGAGGAGTTTTAAAAGGGATAATTTGTTGGAGCCAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR CCA 90 bp CTAGCAAAGTCCCCAACTCCTGAGAGGCAGATGGGAAGGGGATGCTTTGGGCAGAGTCAGGTCCTGCCCTaGAGAGCCTTGGCAGATGGC +
Preference number: 2 (lower is better)
Translates to: LAKSPTPERQMGRGCFGQSQVLP*RALADG
Trigger: GCCATCTGCCAAGGCTCTCCAGGGCAGGACCTGACT...CTGCCCAAAGCATCCCCTTCCCATCTGCCTCTCAGGAGTTGGGGACTTTGCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR TCA 90 bp CCTCTCCCAAGGCTTCTGAACACTCATTCCCCACCAGTCAGGTCCTGCCCTGGAGATTCTACCATGACCTaGATGGGGTTTGACTGGGTC +
Preference number: 2 (lower is better)
Translates to: PLPRLLNTHSPPVRSCPGDSTMT*MGFDWV
Trigger: GACCCAGTCAAACCCCATTCAGGTCATGGTAGAATC...TCCAGGGCAGGACCTGACTGGTGGGGAATGAGTGTTCAGAAGCCTTGGGAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR GCA 90 bp GAGGAAGTCTCTGCATACTGTGATGGTACCACGGGCTGCTTCAATTGTAAGGCACCACCAGTCAGGTCCTaGCCTGGAGAGCCTTGGCAG +
Preference number: 2 (lower is better)
Translates to: EEVSAYCDGTTGCFNCKAPPVRS*PGEPWQ
Trigger: CTGCCAAGGCTCTCCAGGGCAGGACCTGACTGGTGG...TGCCTTACAATTGAAGCAGCCCGTGGTACCATCACAGTATGCAGAGACTTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR CCA 90 bp GCAGGCATTTATAAGTGCCCACCCTCACCAATGCATCGGGGGTGGTCCCTAGATGAGCTCCTGCAAACGTaGCTCCACGTTGTCCCAGTA +
Preference number: 2 (lower is better)
Translates to: AGIYKCPPSPMHRGWSLDELLQT*LHVVPV
Trigger: TACTGGGACAACGTGGAGCCACGTTTGCAGGAGCTC...ATCTAGGGACCACCCCCGATGCATTGGTGAGGGTGGGCACTTATAAATGCCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR GCA 90 bp GGCTGGAATGGCTTAACAATAGCAGGCATTTATAAGTGCCCACCCTCACCAATGCCACCAGTCAGGTCCTaGCCTGGAGAGCCTTGGCAG +
Preference number: 2 (lower is better)
Translates to: GWNGLTIAGIYKCPPSPMPPVRS*PGEPWQ
Trigger: CTGCCAAGGCTCTCCAGGGCAGGACCTGACTGGTGG...CATTGGTGAGGGTGGGCACTTATAAATGCCTGCTATTGTTAAGCCATTCCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR CCA 90 bp AATCTCCTAGCAAAGTCCCCAACTCCTGAGAGGCAGATGGGAAGGGGATGCTTTAGAGAGCTGTCCGACTaGGGGAGCTGCACTTGGTTG +
Preference number: 2 (lower is better)
Translates to: NLLAKSPTPERQMGRGCFRELSD*GSCTWL
Trigger: CAACCAAGTGCAGCTCCCCCAGTCGGACAGCTCTCT...AAAGCATCCCCTTCCCATCTGCCTCTCAGGAGTTGGGGACTTTGCTAGGAGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367218.7
ENST00000484746.1
3UTR CAA 90 bp CTGTCCGACTGGGGGAGCTGCACTTGGTTGCAATCCACCGCATTGTaGTTTGTATTGGCATATGGAGTGACCTCACCATCCAACAGGAGC +
Preference number: 2 (lower is better)
Translates to: LSDWGSCTWLQSTAL*FVLAYGVTSPSNRS
Trigger: GCTCCTGTTGGATGGTGAGGTCACTCCATATGCCAATACAAACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCCCCAGTCGGACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
3UTR CAA 90 bp GAGCTGTCCGACTGGGGGAGCTGCACTTGGTTGCAATCCACCGCATaGTTGTTTGTATTGGCATATGGAGTGACCTCACCATCCAACAGG +
Preference number: 2 (lower is better)
Translates to: ELSDWGSCTWLQSTA*LFVLAYGVTSPSNR
Trigger: CCTGTTGGATGGTGAGGTCACTCCATATGCCAATACAAACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCCCCAGTCGGACAGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
3UTR CAA 90 bp TCTAGGCTCTGTAGAGAGCTGTCCGACTGGGGGAGCTGCACTTGGTaGCAATCCACCGCATTGTTGTTTGTATTGGCGAATTCAGGGTGG +
Preference number: 2 (lower is better)
Translates to: SRLCRELSDWGSCTW*QSTALLFVLANSGW
Trigger: CCACCCTGAATTCGCCAATACAAACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCCCCAGTCGGACAGCTCTCTACAGAGCCTAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484746.1
3UTR-3UTR GCA 90 bp ATGGCTTTGAAAGCAGTGGTCACCCCAAAGAGGAGCCCACAAAAGTCTGCTTTGTCCGACTGGGGGAGCTaGACTTGGTTGCAATCCACC +
Preference number: 2 (lower is better)
Translates to: MALKAVVTPKRSPQKSALSDWGS*TWLQST
Trigger: GGTGGATTGCAACCAAGTGCAGCTCCCCCAGTCGGA...CAAAGCAGACTTTTGTGGGCTCCTCTTTGGGGTGACCACTGCTTTCAAAGCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR CCA 90 bp GAAACTGGAGAGAATGTCGAAGCTGGTCCCCAGGCACCTAAGCTCAAGGTTTCTACATCGGGGAGAATGTaGGGTGGGGTGATGCCAAGA +
Preference number: 2 (lower is better)
Translates to: ETGENVEAGPQAPKLKVSTSGRM*GGVMPR
Trigger: TCTTGGCATCACCCCACCCCACATTCTCCCCGATGT...AGAAACCTTGAGCTTAGGTGCCTGGGGACCAGCTTCGACATTCTCTCCAGTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR CCA 90 bp TGTCCAGAGGGATTTCTAGGTGATCTCTCTCTTAACCCCTTTAGGGACAGGAGAAGTCAGGTCCTGCCCTaGAGAGCCTTGGCAGATGGC +
Preference number: 2 (lower is better)
Translates to: CPEGFLGDLSLNPFRDRRSQVLP*RALADG
Trigger: GCCATCTGCCAAGGCTCTCCAGGGCAGGACCTGACT...TCTCCTGTCCCTAAAGGGGTTAAGAGAGAGATCACCTAGAAATCCCTCTGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR CCA 90 bp GGCTGGAATGGCTTAACAATAGCAGGCATTTATAAGTGCCCACCCTCACCAATGAGTCAGGTCCTGCCCTaGAGAGCCTTGGCAGATGGC +
Preference number: 2 (lower is better)
Translates to: GWNGLTIAGIYKCPPSPMSQVLP*RALADG
Trigger: GCCATCTGCCAAGGCTCTCCAGGGCAGGACCTGACT...CATTGGTGAGGGTGGGCACTTATAAATGCCTGCTATTGTTAAGCCATTCCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR CCA 90 bp GCTCATCTCCTTCCATCTCTCCTAATCAAGAGCAAAGGGAACAGCAGGCCTAACGGCACAGGGCTTTACTaGGCAGCAGCTGGAGCATGT +
Preference number: 2 (lower is better)
Translates to: AHLLPSLLIKSKGNSRPNGTGLY*AAAGAC
Trigger: ACATGCTCCAGCTGCTGCCCAGTAAAGCCCTGTGCC...GTTAGGCCTGCTGTTCCCTTTGCTCTTGATTAGGAGAGATGGAAGGAGATGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR CAA 90 bp TGGGGGAGCTGCACTTGGTTGCAATCCACCGCATTGTTGTTTGTATaGGCATATGGAGTGACCTCACCATCCAACAGGAGCACCCTAGTC +
Preference number: 2 (lower is better)
Translates to: WGSCTWLQSTALLFV*AYGVTSPSNRSTLV
Trigger: GACTAGGGTGCTCCTGTTGGATGGTGAGGTCACTCCATATGCCAATACAAACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
3UTR CAA 90 bp TCTAGGCTCTGTAGAGAGCTGTCCGACTGGGGGAGCTGCACTTGGTaGCAATCCACCGCATTGTTGTTTGTATTGGCATATGGAGTGACC +
Preference number: 2 (lower is better)
Translates to: SRLCRELSDWGSCTW*QSTALLFVLAYGVT
Trigger: GGTCACTCCATATGCCAATACAAACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCCCCAGTCGGACAGCTCTCTACAGAGCCTAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
3UTR CAA 90 bp AGGAGCCCACAAAAGTCTGCTTTGATGGTCTGTCTTGTCCTAGATTaGGCAGCGTCTGGTCCTCAATATCCAAGCCCAGTAAGGGGGCAG +
Preference number: 2 (lower is better)
Translates to: RSPQKSALMVCLVLD*AASGPQYPSPVRGQ
Trigger: CTGCCCCCTTACTGGGCTTGGATATTGAGGACCAGACGCTGCCAAATCTAGGACAAGACAGACCATCAAAGCAGACTTTTGTGGGCTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR TCA 90 bp GAGCCCACAAAAGTCTGCTTTGATGGTCTGTCTTGTCCTAGATTTGGCAGCGTCGACCTGAATGGGGTTTaGCTGGGTCCCGCTACAAAC +
Preference number: 2 (lower is better)
Translates to: EPTKVCFDGLSCPRFGSVDLNGV*LGPATN
Trigger: GTTTGTAGCGGGACCCAGTCAAACCCCATTCAGGTC...GACGCTGCCAAATCTAGGACAAGACAGACCATCAAAGCAGACTTTTGTGGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR TCA 90 bp GAGGAAGTCTCTGCATACTGTGATGGTACCACGGGCTGCTTCAATTGTAAGGCAGACCTGAATGGGGTTTaGCTGGGTCCCGCTACAAAC +
Preference number: 2 (lower is better)
Translates to: EEVSAYCDGTTGCFNCKADLNGV*LGPATN
Trigger: GTTTGTAGCGGGACCCAGTCAAACCCCATTCAGGTC...TGCCTTACAATTGAAGCAGCCCGTGGTACCATCACAGTATGCAGAGACTTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR GCA 90 bp GGAGAAAACATGAACCAAAGGCCAATTCAGTTATGGGAGCTCATCTCCTTCCATCCACCAGTCAGGTCCTaGCCTGGAGAGCCTTGGCAG +
Preference number: 2 (lower is better)
Translates to: GENMNQRPIQLWELISFHPPVRS*PGEPWQ
Trigger: CTGCCAAGGCTCTCCAGGGCAGGACCTGACTGGTGG...ATGGAAGGAGATGAGCTCCCATAACTGAATTGGCCTTTGGTTCATGTTTTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR CCA 90 bp GCTCATCTCCTTCCATCTCTCCTAATCAAGAGCAAAGGGAACAGCAGGCCTAACCAGGAGTGGTGTTCGTaGCAACTCCTCCTCTATGGC +
Preference number: 2 (lower is better)
Translates to: AHLLPSLLIKSKGNSRPNQEWCS*QLLLYG
Trigger: GCCATAGAGGAGGAGTTGCCACGAACACCACTCCTG...GTTAGGCCTGCTGTTCCCTTTGCTCTTGATTAGGAGAGATGGAAGGAGATGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367218.7
3UTR-3UTR TCA 90 bp CCTCTCCCAAGGCTTCTGAACACTCATTCCCCACCAGTCAGGTCCTGCCCTGGAATATTTGTCTCCCTCTaGACCCTCAACTTAGCTTAT +
Preference number: 2 (lower is better)
Translates to: PLPRLLNTHSPPVRSCPGIFVSL*TLNLAY
Trigger: ATAAGCTAAGTTGAGGGTTCAGAGGGAGACAAATAT...TCCAGGGCAGGACCTGACTGGTGGGGAATGAGTGTTCAGAAGCCTTGGGAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR CCA 90 bp GGCTGGAATGGCTTAACAATAGCAGGCATTTATAAGTGCCCACCCTCACCAATGACATCGGGGAGAATGTaGGGTGGGGTGATGCCAAGA +
Preference number: 2 (lower is better)
Translates to: GWNGLTIAGIYKCPPSPMTSGRM*GGVMPR
Trigger: TCTTGGCATCACCCCACCCCACATTCTCCCCGATGT...CATTGGTGAGGGTGGGCACTTATAAATGCCTGCTATTGTTAAGCCATTCCAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR CAA 90 bp TTGAAAGCAGTGGTCACCCCAAAGAGGAGCCCACAAAAGTCTGCTTaGATGGTCTGTCTTGTCCTAGATTTGGCAGCGTCTGGTCCTCAA +
Preference number: 2 (lower is better)
Translates to: LKAVVTPKRSPQKSA*MVCLVLDLAASGPQ
Trigger: TTGAGGACCAGACGCTGCCAAATCTAGGACAAGACAGACCATCAAAGCAGACTTTTGTGGGCTCCTCTTTGGGGTGACCACTGCTTTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR TCA 90 bp GAAACTGGAGAGAATGTCGAAGCTGGTCCCCAGGCACCTAAGCTCAAGGTTTCTTATTGGCATATGGAGTaGCCTCACCATCCAACAGGA +
Preference number: 2 (lower is better)
Translates to: ETGENVEAGPQAPKLKVSYWHME*PHHPTG
Trigger: TCCTGTTGGATGGTGAGGTCACTCCATATGCCAATA...AGAAACCTTGAGCTTAGGTGCCTGGGGACCAGCTTCGACATTCTCTCCAGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367218.7
3UTR-3UTR TCA 90 bp AAATGGCACAGACTTGTAGGACAAAATCCAGAATTCAGGAGAGGAACATCGGGGGACCTGAATGGGGTTTaGCTGGGTCCCGCTACAAAC +
Preference number: 2 (lower is better)
Translates to: KWHRLVGQNPEFRRGTSGDLNGV*LGPATN
Trigger: GTTTGTAGCGGGACCCAGTCAAACCCCATTCAGGTC...CCCCGATGTTCCTCTCCTGAATTCTGGATTTTGTCCTACAAGTCTGTGCCATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000341360.6
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR GCA 90 bp GCTCATCTCCTTCCATCTCTCCTAATCAAGAGCAAAGGGAACAGCAGGCCTAACGGAGCTGCACTTGGTTaGAATCCACCGCATTGTTGT +
Preference number: 2 (lower is better)
Translates to: AHLLPSLLIKSKGNSRPNGAALG*NPPHCC
Trigger: ACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCC...GTTAGGCCTGCTGTTCCCTTTGCTCTTGATTAGGAGAGATGGAAGGAGATGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR GCA 90 bp ATCCTAATGACTAGTCAGGAAAGATTCTGTCTATCCATCTGCATGGTGGGGGTTTCCGACTGGGGGAGCTaGACTTGGTTGCAATCCACC +
Preference number: 2 (lower is better)
Translates to: ILMTSQERFCLSICMVGVSDWGS*TWLQST
Trigger: GGTGGATTGCAACCAAGTGCAGCTCCCCCAGTCGGA...AACCCCCACCATGCAGATGGATAGACAGAATCTTTCCTGACTAGTCATTAGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR GCA 90 bp TCTTTATGTTTCCTACTGTGGACAGCTCAGGTGAAAGGGGTGAGGGAGGACAGATACAAATGGAGCTCCTaGAAACGTGGCTCCACGTTG +
Preference number: 2 (lower is better)
Translates to: SLCFLLWTAQVKGVREDRYKWSS*KRGSTL
Trigger: CAACGTGGAGCCACGTTTGCAGGAGCTCCATTTGTA...TCTGTCCTCCCTCACCCCTTTCACCTGAGCTGTCCACAGTAGGAAACATAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR CCA 90 bp CATACTGTGATGGTACCACGGGCTGCTTCAATTGTAAGGCAAAGGAAGCAGGAATTCCTCATCCAGGAGTaGTGTTCGTGGCAACTCCTC +
Preference number: 2 (lower is better)
Translates to: HTVMVPRAASIVRQRKQEFLIQE*CSWQLL
Trigger: GAGGAGTTGCCACGAACACCACTCCTGGATGAGGAA...TTCCTGCTTCCTTTGCCTTACAATTGAAGCAGCCCGTGGTACCATCACAGTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367218.7
3UTR-3UTR CCA 90 bp GAGCCTTGGCAGATGGCTTTGAAAGCAGTGGTCACCCCAAAGAGGAGCCCACAAAATCAAGGGTTCTTTTaGGCCAAAAGGGAGAAGGAT +
Preference number: 2 (lower is better)
Translates to: EPWQMALKAVVTPKRSPQNQGFF*AKREKD
Trigger: ATCCTTCTCCCTTTTGGCCCAAAAGAACCCTTGATT...TTGTGGGCTCCTCTTTGGGGTGACCACTGCTTTCAAAGCCATCTGCCAAGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR CCA 90 bp TTCTTTATGTTTCCTACTGTGGACAGCTCAGGTGAAAGGGGTGAGGGAGGACAGGGGAAGGGGATGCTTTaGGCAGTATTCAGGGGAAAA +
Preference number: 2 (lower is better)
Translates to: FFMFPTVDSSGERGEGGQGKGML*AVFRGK
Trigger: TTTTCCCCTGAATACTGCCCAAAGCATCCCCTTCCC...CTGTCCTCCCTCACCCCTTTCACCTGAGCTGTCCACAGTAGGAAACATAAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR TCA 90 bp GTGATCTCTCTCTTAACCCCTTTAGGGACAGGAGAGTCATTCCAGAGGACAGATGATTCTACCATGACCTaGATGGGGTTTGACTGGGTC +
Preference number: 2 (lower is better)
Translates to: VISLLTPLGTGESFQRTDDSTMT*MGFDWV
Trigger: GACCCAGTCAAACCCCATTCAGGTCATGGTAGAATC...ATCTGTCCTCTGGAATGACTCTCCTGTCCCTAAAGGGGTTAAGAGAGAGATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR TCA 90 bp TACCACTCTGCCAGCTATTCTTCAAGAAACACAAATCCAACAGAGGCCCCTGATCTTCATGGGCAAGGCTaGTCTCCCTGGCACTTAAGA +
Preference number: 2 (lower is better)
Translates to: YHSASYSSRNTNPTEAPDLHGQG*SPWHLR
Trigger: TCTTAAGTGCCAGGGAGATCAGCCTTGCCCATGAAG...ATCAGGGGCCTCTGTTGGATTTGTGTTTCTTGAAGAATAGCTGGCAGAGTGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR CCA 90 bp AAATGGCACAGACTTGTAGGACAAAATCCAGAATTCAGGAGAGGAACATCGGGGGCAACTCCTCCTCTATaGCGAATTCAGGGTGGGTCA +
Preference number: 2 (lower is better)
Translates to: KWHRLVGQNPEFRRGTSGATPPL*RIQGGS
Trigger: TGACCCACCCTGAATTCGCCATAGAGGAGGAGTTGC...CCCCGATGTTCCTCTCCTGAATTCTGGATTTTGTCCTACAAGTCTGTGCCATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
3UTR-3UTR CCA 90 bp TCTTTATGTTTCCTACTGTGGACAGCTCAGGTGAAAGGGGTGAGGGAGGACAGATCTCACATGGGAATTTaGCCGTTCATACATCCCCTC +
Preference number: 2 (lower is better)
Translates to: SLCFLLWTAQVKGVREDRSHMGI*PFIHPL
Trigger: GAGGGGATGTATGAACGGCCAAATTCCCATGTGAGA...TCTGTCCTCCCTCACCCCTTTCACCTGAGCTGTCCACAGTAGGAAACATAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR CCA 90 bp TGTCCAGAGGGATTTCTAGGTGATCTCTCTCTTAACCCCTTTAGGGACAGGAGATTGGCGAATTCAGGGTaGGTCATGAAGCTGTGGATG +
Preference number: 2 (lower is better)
Translates to: CPEGFLGDLSLNPFRDRRLANSG*VMKLWM
Trigger: CATCCACAGCTTCATGACCCACCCTGAATTCGCCAA...TCTCCTGTCCCTAAAGGGGTTAAGAGAGAGATCACCTAGAAATCCCTCTGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484746.1
3UTR-3UTR TCA 90 bp GGAGAAAACATGAACCAAAGGCCAATTCAGTTATGGGAGCTCATCTCCTTCCATGCCAACTCTCCTCTCTaGAGCTCAAGGGGAAGAAGA +
Preference number: 2 (lower is better)
Translates to: GENMNQRPIQLWELISFHANSPL*SSRGRR
Trigger: TCTTCTTCCCCTTGAGCTTCAGAGAGGAGAGTTGGC...ATGGAAGGAGATGAGCTCCCATAACTGAATTGGCCTTTGGTTCATGTTTTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR GCA 90 bp CCAAAGAGGAGCCCACAAAAGTCTGCTTTGATGGTCTGTCTTGTCCTAGATTTGGGAGCTGCACTTGGTTaGAATCCACCGCATTGTTGT +
Preference number: 2 (lower is better)
Translates to: PKRSPQKSALMVCLVLDLGAALG*NPPHCC
Trigger: ACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCC...CAAATCTAGGACAAGACAGACCATCAAAGCAGACTTTTGTGGGCTCCTCTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR CCA 90 bp CTAGCAAAGTCCCCAACTCCTGAGAGGCAGATGGGAAGGGGATGCTTTGGGCAGAAAGACAAAGAACTTTaGAGAGGTTTGAATGAAAGG +
Preference number: 2 (lower is better)
Translates to: LAKSPTPERQMGRGCFGQKDKEL*RGLNER
Trigger: CCTTTCATTCAAACCTCTCCAAAGTTCTTTGTCTTT...CTGCCCAAAGCATCCCCTTCCCATCTGCCTCTCAGGAGTTGGGGACTTTGCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR CCA 90 bp TGTCCAGAGGGATTTCTAGGTGATCTCTCTCTTAACCCCTTTAGGGACAGGAGATCTCACATGGGAATTTaGCCGTTCATACATCCCCTC +
Preference number: 2 (lower is better)
Translates to: CPEGFLGDLSLNPFRDRRSHMGI*PFIHPL
Trigger: GAGGGGATGTATGAACGGCCAAATTCCCATGTGAGA...TCTCCTGTCCCTAAAGGGGTTAAGAGAGAGATCACCTAGAAATCCCTCTGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR GCA 90 bp CATACTGTGATGGTACCACGGGCTGCTTCAATTGTAAGGCAAAGGAAGCAGGAATGTATACCACACATATaGAACCTTCATGGGCAAGGC +
Preference number: 2 (lower is better)
Translates to: HTVMVPRAASIVRQRKQECIPHI*NLHGQG
Trigger: GCCTTGCCCATGAAGGTTGCATATGTGTGGTATACA...TTCCTGCTTCCTTTGCCTTACAATTGAAGCAGCCCGTGGTACCATCACAGTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR GCA 90 bp CATACTGTGATGGTACCACGGGCTGCTTCAATTGTAAGGCAAAGGAAGCAGGAACTAAGTCACCTGTCATaGCAAACAGCTGGTTATGTG +
Preference number: 2 (lower is better)
Translates to: HTVMVPRAASIVRQRKQELSHLS*QTAGYV
Trigger: CACATAACCAGCTGTTTGGCATGACAGGTGACTTAG...TTCCTGCTTCCTTTGCCTTACAATTGAAGCAGCCCGTGGTACCATCACAGTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR CCA 90 bp CCAAAGAGGAGCCCACAAAAGTCTGCTTTGATGGTCTGTCTTGTCCTAGATTTGGCTCTTGCCTCTTCATaGTCAGGTAGAGGTTCACTT +
Preference number: 2 (lower is better)
Translates to: PKRSPQKSALMVCLVLDLALASS*SGRGSL
Trigger: AAGTGAACCTCTACCTGACCATGAAGAGGCAAGAGC...CAAATCTAGGACAAGACAGACCATCAAAGCAGACTTTTGTGGGCTCCTCTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR CCA 90 bp GAGCCCACAAAAGTCTGCTTTGATGGTCTGTCTTGTCCTAGATTTGGCAGCGTCAATCAAGGGTTCTTTTaGGCCAAAAGGGAGAAGGAT +
Preference number: 2 (lower is better)
Translates to: EPTKVCFDGLSCPRFGSVNQGFF*AKREKD
Trigger: ATCCTTCTCCCTTTTGGCCCAAAAGAACCCTTGATT...GACGCTGCCAAATCTAGGACAAGACAGACCATCAAAGCAGACTTTTGTGGGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR CCA 90 bp GGCTGGAATGGCTTAACAATAGCAGGCATTTATAAGTGCCCACCCTCACCAATGATATTTGAGAAAGGCTaGGACCTTCTCAGAGACTGG +
Preference number: 2 (lower is better)
Translates to: GWNGLTIAGIYKCPPSPMIFEKG*DLLRDW
Trigger: CCAGTCTCTGAGAAGGTCCCAGCCTTTCTCAAATAT...CATTGGTGAGGGTGGGCACTTATAAATGCCTGCTATTGTTAAGCCATTCCAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR CCA 90 bp GAGGAAGTCTCTGCATACTGTGATGGTACCACGGGCTGCTTCAATTGTAAGGCAGGACAGATGATACTATaGGAAGGATCTAGCCTTAAG +
Preference number: 2 (lower is better)
Translates to: EEVSAYCDGTTGCFNCKAGQMIL*EGSSLK
Trigger: CTTAAGGCTAGATCCTTCCCATAGTATCATCTGTCC...TGCCTTACAATTGAAGCAGCCCGTGGTACCATCACAGTATGCAGAGACTTCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR TCA 90 bp ATGGCTTTGAAAGCAGTGGTCACCCCAAAGAGGAGCCCACAAAAGTCTGCTTTGATATTTGTCTCCCTCTaGACCCTCAACTTAGCTTAT +
Preference number: 2 (lower is better)
Translates to: MALKAVVTPKRSPQKSALIFVSL*TLNLAY
Trigger: ATAAGCTAAGTTGAGGGTTCAGAGGGAGACAAATAT...CAAAGCAGACTTTTGTGGGCTCCTCTTTGGGGTGACCACTGCTTTCAAAGCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR TCA 90 bp GGCTGGAATGGCTTAACAATAGCAGGCATTTATAAGTGCCCACCCTCACCAATGATTCCAGAGGACAGATaGTACTATGGGAAGGATCTA +
Preference number: 2 (lower is better)
Translates to: GWNGLTIAGIYKCPPSPMIPEDR*YYGKDL
Trigger: TAGATCCTTCCCATAGTATCATCTGTCCTCTGGAAT...CATTGGTGAGGGTGGGCACTTATAAATGCCTGCTATTGTTAAGCCATTCCAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR GCA 90 bp TACCACTCTGCCAGCTATTCTTCAAGAAACACAAATCCAACAGAGGCCCCTGATGAGCCCACAAAAGTCTaGTTTGATGGTCTGTCTTGT +
Preference number: 2 (lower is better)
Translates to: YHSASYSSRNTNPTEAPDEPTKV*FDGLSC
Trigger: ACAAGACAGACCATCAAAGCAGACTTTTGTGGGCTC...ATCAGGGGCCTCTGTTGGATTTGTGTTTCTTGAAGAATAGCTGGCAGAGTGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR CCA 90 bp CTGGCGGATTTTATACATTCCATCTCTACCGCAACATATTTCACTTGGGGATATGCAACTCCTCCTCTATaGCGAATTCAGGGTGGGTCA +
Preference number: 2 (lower is better)
Translates to: LADFIHSISTATYFTWGYATPPL*RIQGGS
Trigger: TGACCCACCCTGAATTCGCCATAGAGGAGGAGTTGC...ATATCCCCAAGTGAAATATGTTGCGGTAGAGATGGAATGTATAAAATCCGCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
3UTR-3UTR CCA 90 bp CTGGCGGATTTTATACATTCCATCTCTACCGCAACATATTTCACTTGGGGATATTTCCTCATCCAGGAGTaGTGTTCGTGGCAACTCCTC +
Preference number: 2 (lower is better)
Translates to: LADFIHSISTATYFTWGYFLIQE*CSWQLL
Trigger: GAGGAGTTGCCACGAACACCACTCCTGGATGAGGAA...ATATCCCCAAGTGAAATATGTTGCGGTAGAGATGGAATGTATAAAATCCGCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
3UTR-3UTR TCA 90 bp TGCACAGCAGTATTGGTTTCTGTTCATCAGCAAAAAGCTTTATTGGCTCCAACAGATTCTACCATGACCTaGATGGGGTTTGACTGGGTC +
Preference number: 2 (lower is better)
Translates to: CTAVLVSVHQQKALLAPTDSTMT*MGFDWV
Trigger: GACCCAGTCAAACCCCATTCAGGTCATGGTAGAATC...TGTTGGAGCCAATAAAGCTTTTTGCTGATGAACAGAAACCAATACTGCTGTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR TCA 90 bp GTGATCTCTCTCTTAACCCCTTTAGGGACAGGAGAGTCATTCCAGAGGACAGATATATTTGTCTCCCTCTaGACCCTCAACTTAGCTTAT +
Preference number: 2 (lower is better)
Translates to: VISLLTPLGTGESFQRTDIFVSL*TLNLAY
Trigger: ATAAGCTAAGTTGAGGGTTCAGAGGGAGACAAATAT...ATCTGTCCTCTGGAATGACTCTCCTGTCCCTAAAGGGGTTAAGAGAGAGATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR TCA 90 bp AGTGAAAGGGCGTCTGGTCTATTCAGAGGAAGAGGCTGGAATGGCTTAACAATACTGGGTTTTCAGCAGTaGGGTAACCATTCAGATTTA +
Preference number: 2 (lower is better)
Translates to: SERASGLFRGRGWNGLTILGFQQ*GNHSDL
Trigger: TAAATCTGAATGGTTACCTCACTGCTGAAAACCCAG...TATTGTTAAGCCATTCCAGCCTCTTCCTCTGAATAGACCAGACGCCCTTTCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR GCA 90 bp TGCACAGCAGTATTGGTTTCTGTTCATCAGCAAAAAGCTTTATTGGCTCCAACATACAAATGGAGCTCCTaGAAACGTGGCTCCACGTTG +
Preference number: 2 (lower is better)
Translates to: CTAVLVSVHQQKALLAPTYKWSS*KRGSTL
Trigger: CAACGTGGAGCCACGTTTGCAGGAGCTCCATTTGTA...TGTTGGAGCCAATAAAGCTTTTTGCTGATGAACAGAAACCAATACTGCTGTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR CCA 90 bp CTGGCGGATTTTATACATTCCATCTCTACCGCAACATATTTCACTTGGGGATATATGGCGAATTCAGGGTaGGTCATGAAGCTGTGGATG +
Preference number: 2 (lower is better)
Translates to: LADFIHSISTATYFTWGYMANSG*VMKLWM
Trigger: CATCCACAGCTTCATGACCCACCCTGAATTCGCCAT...ATATCCCCAAGTGAAATATGTTGCGGTAGAGATGGAATGTATAAAATCCGCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
3UTR-3UTR CCA 90 bp TCTGGAACTAAATCAAGGGTTCTTTTGGGCCAAAAGGGAGAAGGATCTAAGTTTATGGCGAATTCAGGGTaGGTCATGAAGCTGTGGATG +
Preference number: 2 (lower is better)
Translates to: SGTKSRVLLGQKGEGSKFMANSG*VMKLWM
Trigger: CATCCACAGCTTCATGACCCACCCTGAATTCGCCAT...AAACTTAGATCCTTCTCCCTTTTGGCCCAAAAGAACCCTTGATTTAGTTCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367218.7
3UTR-3UTR CCA 90 bp GTATTGGTTTCTGTTCATCAGCAAAAAGCTTTATTGGCTCCAACAAATTATCCCTGGGGGAGCTGCACTTaGTTGCAATCCACCGCATTG +
Preference number: 2 (lower is better)
Translates to: VLVSVHQQKALLAPTNYPWGSCT*LQSTAL
Trigger: CAATGCGGTGGATTGCAACCAAGTGCAGCTCCCCCA...GGGATAATTTGTTGGAGCCAATAAAGCTTTTTGCTGATGAACAGAAACCAATAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR CCA 90 bp AACTTAGCTTATAAATGGCACAGACTTGTAGGACAAAATCCAGAATTCAGGAGATGGGGGAGCTGCACTTaGTTGCAATCCACCGCATTG +
Preference number: 2 (lower is better)
Translates to: NLAYKWHRLVGQNPEFRRWGSCT*LQSTAL
Trigger: CAATGCGGTGGATTGCAACCAAGTGCAGCTCCCCCA...TCTCCTGAATTCTGGATTTTGTCCTACAAGTCTGTGCCATTTATAAGCTAAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR CCA 90 bp TCTTTATGTTTCCTACTGTGGACAGCTCAGGTGAAAGGGGTGAGGGAGGACAGATCATCACCTCATAGATaGGATAGACGAAAATGGAAA +
Preference number: 2 (lower is better)
Translates to: SLCFLLWTAQVKGVREDRSSPHR*DRRKWK
Trigger: TTTCCATTTTCGTCTATCCCATCTATGAGGTGATGA...TCTGTCCTCCCTCACCCCTTTCACCTGAGCTGTCCACAGTAGGAAACATAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR CCA 90 bp ATGGCTTTGAAAGCAGTGGTCACCCCAAAGAGGAGCCCACAAAAGTCTGCTTTGTCATCACCTCATAGATaGGATAGACGAAAATGGAAA +
Preference number: 2 (lower is better)
Translates to: MALKAVVTPKRSPQKSALSSPHR*DRRKWK
Trigger: TTTCCATTTTCGTCTATCCCATCTATGAGGTGATGA...CAAAGCAGACTTTTGTGGGCTCCTCTTTGGGGTGACCACTGCTTTCAAAGCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR CCA 90 bp AAAGTCTGCTTTGATGGTCTGTCTTGTCCTAGATTTGGCAGCGTCTGGTCCTCAGCAACATATTTCACTTaGGGATATTTGTCTCCCTCT +
Preference number: 2 (lower is better)
Translates to: KVCFDGLSCPRFGSVWSSATYFT*GYLSPS
Trigger: AGAGGGAGACAAATATCCCCAAGTGAAATATGTTGC...TGAGGACCAGACGCTGCCAAATCTAGGACAAGACAGACCATCAAAGCAGACTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR CCA 90 bp TCTTTATGTTTCCTACTGTGGACAGCTCAGGTGAAAGGGGTGAGGGAGGACAGAAAGCAGAAGGTAACCTaGCAACAACAGAGAAATATT +
Preference number: 2 (lower is better)
Translates to: SLCFLLWTAQVKGVREDRKQKVT*QQQRNI
Trigger: AATATTTCTCTGTTGTTGCCAGGTTACCTTCTGCTT...TCTGTCCTCCCTCACCCCTTTCACCTGAGCTGTCCACAGTAGGAAACATAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR CCA 90 bp GTGATCTCTCTCTTAACCCCTTTAGGGACAGGAGAGTCATTCCAGAGGACAGATATTAGAATCAGAAACTaGAGAGAATGTCGAAGCTGG +
Preference number: 2 (lower is better)
Translates to: VISLLTPLGTGESFQRTDIRIRN*RECRSW
Trigger: CCAGCTTCGACATTCTCTCCAGTTTCTGATTCTAAT...ATCTGTCCTCTGGAATGACTCTCCTGTCCCTAAAGGGGTTAAGAGAGAGATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR CCA 90 bp AAAAGTCTAGAACCCAACAATTTTTCTTCCCTAAGTATAAAGATGGCTGTTTGCGGCACAGGGCTTTACTaGGCAGCAGCTGGAGCATGT +
Preference number: 2 (lower is better)
Translates to: KSLEPNNFSSLSIKMAVCGTGLY*AAAGAC
Trigger: ACATGCTCCAGCTGCTGCCCAGTAAAGCCCTGTGCC...GCAAACAGCCATCTTTATACTTAGGGAAGAAAAATTGTTGGGTTCTAGACTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR CCA 90 bp ATGAAAAATGCAAACCCCAAATCAGAGTATCCTTATAGACCAGGAGATATTCGTGAGCTCCTGCAAACGTaGCTCCACGTTGTCCCAGTA +
Preference number: 2 (lower is better)
Translates to: MKNANPKSEYPYRPGDIRELLQT*LHVVPV
Trigger: TACTGGGACAACGTGGAGCCACGTTTGCAGGAGCTC...ACGAATATCTCCTGGTCTATAAGGATACTCTGATTTGGGGTTTGCATTTTTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR CCA 90 bp GGAGAAAACATGAACCAAAGGCCAATTCAGTTATGGGAGCTCATCTCCTTCCATGAAGAAAAGGCTAGGTaGATCAGGTCATCTTCCTCT +
Preference number: 2 (lower is better)
Translates to: GENMNQRPIQLWELISFHEEKAR*IRSSSS
Trigger: AGAGGAAGATGACCTGATCCACCTAGCCTTTTCTTC...ATGGAAGGAGATGAGCTCCCATAACTGAATTGGCCTTTGGTTCATGTTTTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR TCA 90 bp TGTCCAGAGGGATTTCTAGGTGATCTCTCTCTTAACCCCTTTAGGGACAGGAGAAAGTCAAGCTTAAGTTaGAATCCTTGTAAGTCTGTG +
Preference number: 2 (lower is better)
Translates to: CPEGFLGDLSLNPFRDRRKSSLS*NPCKSV
Trigger: CACAGACTTACAAGGATTTCAACTTAAGCTTGACTT...TCTCCTGTCCCTAAAGGGGTTAAGAGAGAGATCACCTAGAAATCCCTCTGGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR TCA 90 bp ATGAAAAATGCAAACCCCAAATCAGAGTATCCTTATAGACCAGGAGATATTCGTCTTGGCAGATGGCTTTaGAAGCAGTGGTCACCCCAA +
Preference number: 2 (lower is better)
Translates to: MKNANPKSEYPYRPGDIRLGRWL*KQWSPQ
Trigger: TTGGGGTGACCACTGCTTTCAAAGCCATCTGCCAAG...ACGAATATCTCCTGGTCTATAAGGATACTCTGATTTGGGGTTTGCATTTTTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR TCA 90 bp GTATTGGTTTCTGTTCATCAGCAAAAAGCTTTATTGGCTCCAACAAATTATCCCGCCAACTCTCCTCTCTaGAGCTCAAGGGGAAGAAGA +
Preference number: 2 (lower is better)
Translates to: VLVSVHQQKALLAPTNYPANSPL*SSRGRR
Trigger: TCTTCTTCCCCTTGAGCTTCAGAGAGGAGAGTTGGC...GGGATAATTTGTTGGAGCCAATAAAGCTTTTTGCTGATGAACAGAAACCAATAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR CCA 90 bp GCTCATCTCCTTCCATCTCTCCTAATCAAGAGCAAAGGGAACAGCAGGCCTAACAACTTAGCTTATAAATaGCACAGACTTGTAGGACAA +
Preference number: 2 (lower is better)
Translates to: AHLLPSLLIKSKGNSRPNNLAYK*HRLVGQ
Trigger: TTGTCCTACAAGTCTGTGCCATTTATAAGCTAAGTT...GTTAGGCCTGCTGTTCCCTTTGCTCTTGATTAGGAGAGATGGAAGGAGATGAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR CCA 90 bp GAGCCCACAAAAGTCTGCTTTGATGGTCTGTCTTGTCCTAGATTTGGCAGCGTCAACTTAGCTTATAAATaGCACAGACTTGTAGGACAA +
Preference number: 2 (lower is better)
Translates to: EPTKVCFDGLSCPRFGSVNLAYK*HRLVGQ
Trigger: TTGTCCTACAAGTCTGTGCCATTTATAAGCTAAGTT...GACGCTGCCAAATCTAGGACAAGACAGACCATCAAAGCAGACTTTTGTGGGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR CCA 90 bp GAGCCCACAAAAGTCTGCTTTGATGGTCTGTCTTGTCCTAGATTTGGCAGCGTCAAAGACAAAGAACTTTaGAGAGGTTTGAATGAAAGG +
Preference number: 2 (lower is better)
Translates to: EPTKVCFDGLSCPRFGSVKDKEL*RGLNER
Trigger: CCTTTCATTCAAACCTCTCCAAAGTTCTTTGTCTTT...GACGCTGCCAAATCTAGGACAAGACAGACCATCAAAGCAGACTTTTGTGGGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR CCA 90 bp AAAAGTTGTGACACGTGGCAAAAATTAGAATCAGAAACTGGAGAGAATGTCGAAGCTAGAATGGCTCTTTaGCCTCTCCCAAGGCTTCTG +
Preference number: 2 (lower is better)
Translates to: KSCDTWQKLESETGENVEARMAL*PLPRLL
Trigger: CAGAAGCCTTGGGAGAGGCCAAAGAGCCATTCTAGC...TTCGACATTCTCTCCAGTTTCTGATTCTAATTTTTGCCACGTGTCACAACTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR CCA 90 bp CAGAGAAAGAAAATTCAAACTGATGTCTCTAGGCTCTGTAGAGAGCTGTCCGACCATTGTTGTTTGTATTaGCGAATTCAGGGTGGGTCA +
Preference number: 2 (lower is better)
Translates to: QRKKIQTDVSRLCRELSDHCCLY*RIQGGS
Trigger: TGACCCACCCTGAATTCGCCAATACAAACAACAATG...GTCGGACAGCTCTCTACAGAGCCTAGAGACATCAGTTTGAATTTTCTTTCTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484746.1
3UTR-3UTR TCA 90 bp AAAAGTGTTATTAACTTATGCCATATTTACCCACTGCCAGTTGGATCAGTGAAACTTGGCAGATGGCTTTaGAAGCAGTGGTCACCCCAA +
Preference number: 2 (lower is better)
Translates to: KSVINLCHIYPLPVGSVKLGRWL*KQWSPQ
Trigger: TTGGGGTGACCACTGCTTTCAAAGCCATCTGCCAAG...TTTCACTGATCCAACTGGCAGTGGGTAAATATGGCATAAGTTAATAACACTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR CCA 90 bp CACAGACTTGTAGGACAAAATCCAGAATTCAGGAGAGGAACATCGGGGAGAATGTCATCACCTCATAGATaGGATAGACGAAAATGGAAA +
Preference number: 2 (lower is better)
Translates to: HRLVGQNPEFRRGTSGRMSSPHR*DRRKWK
Trigger: TTTCCATTTTCGTCTATCCCATCTATGAGGTGATGA...CATTCTCCCCGATGTTCCTCTCCTGAATTCTGGATTTTGTCCTACAAGTCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341360.6
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR CCA 90 bp ACCCCAAAGAGGAGCCCACAAAAGTCTGCTTTGATGGTCTGTCTTGTCCTAGATAAACAATCACACTACTaGCGGATTTTATACATTCCA +
Preference number: 2 (lower is better)
Translates to: TPKRSPQKSALMVCLVLDKQSHY*RILYIP
Trigger: TGGAATGTATAAAATCCGCCAGTAGTGTGATTGTTT...ATCTAGGACAAGACAGACCATCAAAGCAGACTTTTGTGGGCTCCTCTTTGGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR CCA 90 bp ATGAAAAATGCAAACCCCAAATCAGAGTATCCTTATAGACCAGGAGATATTCGTCATATGCAACCTTCATaGGCAAGGCTGATCTCCCTG +
Preference number: 2 (lower is better)
Translates to: MKNANPKSEYPYRPGDIRHMQPS*ARLISL
Trigger: CAGGGAGATCAGCCTTGCCCATGAAGGTTGCATATG...ACGAATATCTCCTGGTCTATAAGGATACTCTGATTTGGGGTTTGCATTTTTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR CCA 90 bp TGCACAGCAGTATTGGTTTCTGTTCATCAGCAAAAAGCTTTATTGGCTCCAACACAACACACACTGGACTaGGGTATACGTTGCTTTGAT +
Preference number: 2 (lower is better)
Translates to: CTAVLVSVHQQKALLAPTQHTLD*GIRCFD
Trigger: ATCAAAGCAACGTATACCCCAGTCCAGTGTGTGTTG...TGTTGGAGCCAATAAAGCTTTTTGCTGATGAACAGAAACCAATACTGCTGTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR GCA 90 bp CCAAAGAGGAGCCCACAAAAGTCTGCTTTGATGGTCTGTCTTGTCCTAGATTTGTTACCAGCACTTAATTaGTTCAAAAGGACCCTTTTA +
Preference number: 2 (lower is better)
Translates to: PKRSPQKSALMVCLVLDLLPALN*FKRTLL
Trigger: TAAAAGGGTCCTTTTGAAGCAATTAAGTGCTGGTAA...CAAATCTAGGACAAGACAGACCATCAAAGCAGACTTTTGTGGGCTCCTCTTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR CCA 90 bp CTGGCGGATTTTATACATTCCATCTCTACCGCAACATATTTCACTTGGGGATATGTTTGTATTGGCATATaGAGTGACCTCACCATCCAA +
Preference number: 2 (lower is better)
Translates to: LADFIHSISTATYFTWGYVCIGI*SDLTIQ
Trigger: TTGGATGGTGAGGTCACTCCATATGCCAATACAAAC...ATATCCCCAAGTGAAATATGTTGCGGTAGAGATGGAATGTATAAAATCCGCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
3UTR-3UTR CCA 90 bp TTTTCAAAATCAGAATATTTGAGAAAGGCTGGGACCTTCTCAGAGACTGGAAAAGCTCTTGCCTCTTCATaGTCAGGTAGAGGTTCACTT +
Preference number: 2 (lower is better)
Translates to: FSKSEYLRKAGTFSETGKALASS*SGRGSL
Trigger: AAGTGAACCTCTACCTGACCATGAAGAGGCAAGAGC...TTTTCCAGTCTCTGAGAAGGTCCCAGCCTTTCTCAAATATTCTGATTTTGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR CCA 90 bp ATGAAAAATGCAAACCCCAAATCAGAGTATCCTTATAGACCAGGAGATATTCGTGCTCTTGCCTCTTCATaGTCAGGTAGAGGTTCACTT +
Preference number: 2 (lower is better)
Translates to: MKNANPKSEYPYRPGDIRALASS*SGRGSL
Trigger: AAGTGAACCTCTACCTGACCATGAAGAGGCAAGAGC...ACGAATATCTCCTGGTCTATAAGGATACTCTGATTTGGGGTTTGCATTTTTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR CCA 90 bp TACCACTCTGCCAGCTATTCTTCAAGAAACACAAATCCAACAGAGGCCCCTGATAAAGACAAAGAACTTTaGAGAGGTTTGAATGAAAGG +
Preference number: 2 (lower is better)
Translates to: YHSASYSSRNTNPTEAPDKDKEL*RGLNER
Trigger: CCTTTCATTCAAACCTCTCCAAAGTTCTTTGTCTTT...ATCAGGGGCCTCTGTTGGATTTGTGTTTCTTGAAGAATAGCTGGCAGAGTGGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR CCA 90 bp GTATTGGTTTCTGTTCATCAGCAAAAAGCTTTATTGGCTCCAACAAATTATCCCGACCTTCTCAGAGACTaGAAAAGTTGTGACACGTGG +
Preference number: 2 (lower is better)
Translates to: VLVSVHQQKALLAPTNYPDLLRD*KSCDTW
Trigger: CCACGTGTCACAACTTTTCCAGTCTCTGAGAAGGTC...GGGATAATTTGTTGGAGCCAATAAAGCTTTTTGCTGATGAACAGAAACCAATAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR CCA 90 bp AGTGTTATTAACTTATGCCATATTTACCCACTGCCAGTTGGATCAGTGAAACTGGAAGAAAAGGCTAGGTaGATCAGGTCATCTTCCTCT +
Preference number: 2 (lower is better)
Translates to: SVINLCHIYPLPVGSVKLEEKAR*IRSSSS
Trigger: AGAGGAAGATGACCTGATCCACCTAGCCTTTTCTTC...CAGTTTCACTGATCCAACTGGCAGTGGGTAAATATGGCATAAGTTAATAACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR CCA 90 bp ATGAAAAATGCAAACCCCAAATCAGAGTATCCTTATAGACCAGGAGATATTCGTGAAGAAAAGGCTAGGTaGATCAGGTCATCTTCCTCT +
Preference number: 2 (lower is better)
Translates to: MKNANPKSEYPYRPGDIREEKAR*IRSSSS
Trigger: AGAGGAAGATGACCTGATCCACCTAGCCTTTTCTTC...ACGAATATCTCCTGGTCTATAAGGATACTCTGATTTGGGGTTTGCATTTTTCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR TCA 90 bp TGCACAGCAGTATTGGTTTCTGTTCATCAGCAAAAAGCTTTATTGGCTCCAACAGGGTATACGTTGCTTTaGTATCACCATTTGTTTGTT +
Preference number: 2 (lower is better)
Translates to: CTAVLVSVHQQKALLAPTGYTLL*YHHLFV
Trigger: AACAAACAAATGGTGATATCAAAGCAACGTATACCC...TGTTGGAGCCAATAAAGCTTTTTGCTGATGAACAGAAACCAATACTGCTGTGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR GCA 90 bp TGCACAGCAGTATTGGTTTCTGTTCATCAGCAAAAAGCTTTATTGGCTCCAACATCTTTTATACCACTCTaGCAGCTATTCTTCAAGAAA +
Preference number: 2 (lower is better)
Translates to: CTAVLVSVHQQKALLAPTSFIPL*QLFFKK
Trigger: TTTCTTGAAGAATAGCTGGCAGAGTGGTATAAAAGA...TGTTGGAGCCAATAAAGCTTTTTGCTGATGAACAGAAACCAATACTGCTGTGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR CCA 90 bp GTATTGGTTTCTGTTCATCAGCAAAAAGCTTTATTGGCTCCAACAAATTATCCCGCAACATATTTCACTTaGGGATATTTGTCTCCCTCT +
Preference number: 2 (lower is better)
Translates to: VLVSVHQQKALLAPTNYPATYFT*GYLSPS
Trigger: AGAGGGAGACAAATATCCCCAAGTGAAATATGTTGC...GGGATAATTTGTTGGAGCCAATAAAGCTTTTTGCTGATGAACAGAAACCAATAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR CCA 90 bp TGCACAGCAGTATTGGTTTCTGTTCATCAGCAAAAAGCTTTATTGGCTCCAACAAAACAATCACACTACTaGCGGATTTTATACATTCCA +
Preference number: 2 (lower is better)
Translates to: CTAVLVSVHQQKALLAPTKQSHY*RILYIP
Trigger: TGGAATGTATAAAATCCGCCAGTAGTGTGATTGTTT...TGTTGGAGCCAATAAAGCTTTTTGCTGATGAACAGAAACCAATACTGCTGTGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR CCA 90 bp AAAAGTGTTATTAACTTATGCCATATTTACCCACTGCCAGTTGGATCAGTGAAAAATCAAGGGTTCTTTTaGGCCAAAAGGGAGAAGGAT +
Preference number: 2 (lower is better)
Translates to: KSVINLCHIYPLPVGSVKNQGFF*AKREKD
Trigger: ATCCTTCTCCCTTTTGGCCCAAAAGAACCCTTGATT...TTTCACTGATCCAACTGGCAGTGGGTAAATATGGCATAAGTTAATAACACTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR GCA 72 bp AGGCTTCTGAACACTCATTCCCCACCAGTCAGGTCCTaGCCTGGAGAGCCTTGGCAGATGGCTTTGAAAGCA +
Preference number: 3 (lower is better)
Translates to: RLLNTHSPPVRS*PGEPWQMALKA
Trigger: TGCTTTCAAAGCCATCTGCCAAGGCTCTCCAGGGCAGGACCTGACTGGTGGGGAATGAGTGTTCAGAAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR CAA 90 bp TCTCCCAAGGCTTCTGAACACTCATTCCCCACCAGTCAGGTCCTGCCCTGGAGATGTCTTGTCCTAGATTaGGCAGCGTCTGGTCCTCAA +
Preference number: 3 (lower is better)
Translates to: SPKASEHSFPTSQVLPWRCLVLD*AASGPQ
Trigger: TTGAGGACCAGACGCTGCCAAATCTAGGACAAGACA...TCTCCAGGGCAGGACCTGACTGGTGGGGAATGAGTGTTCAGAAGCCTTGGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR CAA 90 bp TCTCCCAAGGCTTCTGAACACTCATTCCCCACCAGTCAGGTCCTGCCCTGGAGAGCATTGTTGTTTGTATaGGCGAATTCAGGGTGGGTC +
Preference number: 3 (lower is better)
Translates to: SPKASEHSFPTSQVLPWRALLFV*ANSGWV
Trigger: GACCCACCCTGAATTCGCCAATACAAACAACAATGC...TCTCCAGGGCAGGACCTGACTGGTGGGGAATGAGTGTTCAGAAGCCTTGGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484746.1
3UTR GCA 72 bp TCTAGGCTCTGTAGAGAGCTGTCCGACTGGGGGAGCTaGACTTGGTTGCAATCCACCGCATTGTTGTTTGTA +
Preference number: 3 (lower is better)
Translates to: SRLCRELSDWGS*TWLQSTALLFV
Trigger: TACAAACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCCCCAGTCGGACAGCTCTCTACAGAGCCTAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000367218.7
ENST00000484746.1
3UTR GCA 72 bp GGTCCCCAGGCACCTAAGCTCAAGGTTTCTGGCCTCTaGAGGAAGGTTTTCTCAGATCATGCTAGAATGGCT +
Preference number: 3 (lower is better)
Translates to: GPQAPKLKVSGL*RKVFSDHARMA
Trigger: AGCCATTCTAGCATGATCTGAGAAAACCTTCCTGCAGAGGCCAGAAACCTTGAGCTTAGGTGCCTGGGGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR GCA 72 bp GGCTGGAATGGCTTAACAATAGCAGGCATTTATAAGTaGCCACCCTCACCAATGCATCGGGGGTGGTCCCTA +
Preference number: 3 (lower is better)
Translates to: GWNGLTIAGIYK*PPSPMHRGWSL
Trigger: TAGGGACCACCCCCGATGCATTGGTGAGGGTGGGCACTTATAAATGCCTGCTATTGTTAAGCCATTCCAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR CCA 72 bp ATTTTCCTCCTCTTCCTCATCCAGGAGTGGTGTTCGTaGCAACTCCTCCTCTATGGCGAATTCAGGGTGGGT +
Preference number: 3 (lower is better)
Translates to: IFLLFLIQEWCS*QLLLYGEFRVG
Trigger: ACCCACCCTGAATTCGCCATAGAGGAGGAGTTGCCACGAACACCACTCCTGGATGAGGAAGAGGAGGAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
3UTR CCA 72 bp TTTGATGGTCTGTCTTGTCCTAGATTTGGCAGCGTCTaGTCCTCAATATCCAAGCCCAGTAAGGGGGCAGGG +
Preference number: 3 (lower is better)
Translates to: FDGLSCPRFGSV*SSISKPSKGAG
Trigger: CCCTGCCCCCTTACTGGGCTTGGATATTGAGGACCAGACGCTGCCAAATCTAGGACAAGACAGACCATCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR CAA 90 bp GTGATCTCTCTCTTAACCCCTTTAGGGACAGGAGAGTCATTCCAGAGGACAGATCTGGGGGAGCTGCACTaGGTTGCAATCCACCGCATT +
Preference number: 3 (lower is better)
Translates to: VISLLTPLGTGESFQRTDLGELH*VAIHRI
Trigger: AATGCGGTGGATTGCAACCAAGTGCAGCTCCCCCAG...ATCTGTCCTCTGGAATGACTCTCCTGTCCCTAAAGGGGTTAAGAGAGAGATCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR CAA 90 bp GAGGAAGTCTCTGCATACTGTGATGGTACCACGGGCTGCTTCAATTGTAAGGCATGGGAAGGGGATGCTTaGGGCAGTATTCAGGGGAAA +
Preference number: 3 (lower is better)
Translates to: EEVSAYCDGTTGCFNCKAWEGDA*GSIQGK
Trigger: TTTCCCCTGAATACTGCCCAAAGCATCCCCTTCCCA...TGCCTTACAATTGAAGCAGCCCGTGGTACCATCACAGTATGCAGAGACTTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR TCA 72 bp AAGCGAGTGTGCCACGCCCCTCTGGGTTTTCAGCAGTaGGGTAACCATTCAGATTTAACCATGCCAACTCTC +
Preference number: 3 (lower is better)
Translates to: KRVCHAPLGFQQ*GNHSDLTMPTL
Trigger: GAGAGTTGGCATGGTTAAATCTGAATGGTTACCTCACTGCTGAAAACCCAGAGGGGCGTGGCACACTCGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR GCA 72 bp AGCAGTGGTCACCCCAAAGAGGAGCCCACAAAAGTCTaGTTTGATGGTCTGTCTTGTCCTAGATTTGGCAGC +
Preference number: 3 (lower is better)
Translates to: SSGHPKEEPTKV*FDGLSCPRFGS
Trigger: GCTGCCAAATCTAGGACAAGACAGACCATCAAAGCAGACTTTTGTGGGCTCCTCTTTGGGGTGACCACTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR CCA 72 bp GGAAAGATTCTGTCTATCCATCTGCATGGTGGGGGTTaGGGGGAAGATTCATTTCCTGACAGCTGTGTCCCT +
Preference number: 3 (lower is better)
Translates to: GKILSIHLHGGG*GEDSFPDSCVP
Trigger: AGGGACACAGCTGTCAGGAAATGAATCTTCCCCCCAACCCCCACCATGCAGATGGATAGACAGAATCTTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR CAA 90 bp GACCTCACCATCCAACAGGAGCACCCTAGTCCCAAACTTAGAAGCCTTGTCAGGGCTGTGGATGGACTTTaGGTTGTAGGGTTTCTGAAT +
Preference number: 3 (lower is better)
Translates to: DLTIQQEHPSPKLRSLVRAVDGL*VVGFLN
Trigger: ATTCAGAAACCCTACAACCAAAAGTCCATCCACAGC...CCTGACAAGGCTTCTAAGTTTGGGACTAGGGTGCTCCTGTTGGATGGTGAGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
3UTR-3UTR CAA 90 bp ATCCTAATGACTAGTCAGGAAAGATTCTGTCTATCCATCTGCATGGTGGGGGTTCTGCCCTGGAGAGCCTaGGCAGATGGCTTTGAAAGC +
Preference number: 3 (lower is better)
Translates to: ILMTSQERFCLSICMVGVLPWRA*ADGFES
Trigger: GCTTTCAAAGCCATCTGCCAAGGCTCTCCAGGGCAG...AACCCCCACCATGCAGATGGATAGACAGAATCTTTCCTGACTAGTCATTAGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR CCA 72 bp GGACAGGAGAGTCATTCCAGAGGACAGATGATACTATaGGAAGGATCTAGCCTTAAGACTGTCACTCAGGGC +
Preference number: 3 (lower is better)
Translates to: GQESHSRGQMIL*EGSSLKTVTQG
Trigger: GCCCTGAGTGACAGTCTTAAGGCTAGATCCTTCCCATAGTATCATCTGTCCTCTGGAATGACTCTCCTGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR CCA 72 bp ATTTATAAGTGCCCACCCTCACCAATGCATCGGGGGTaGTCCCTAGATATGAAAGGTGAGGAAGTCTCTGCA +
Preference number: 3 (lower is better)
Translates to: IYKCPPSPMHRG*SLDMKGEEVSA
Trigger: TGCAGAGACTTCCTCACCTTTCATATCTAGGGACCACCCCCGATGCATTGGTGAGGGTGGGCACTTATAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR CAA 90 bp GAAACTGGAGAGAATGTCGAAGCTGGTCCCCAGGCACCTAAGCTCAAGGTTTCTAAATCAAGGGTTCTTTaGGGCCAAAAGGGAGAAGGA +
Preference number: 3 (lower is better)
Translates to: ETGENVEAGPQAPKLKVSKSRVL*GQKGEG
Trigger: TCCTTCTCCCTTTTGGCCCAAAAGAACCCTTGATTT...AGAAACCTTGAGCTTAGGTGCCTGGGGACCAGCTTCGACATTCTCTCCAGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR CCA 72 bp GTTGCAATCCACCGCATTGTTGTTTGTATTGGCATATaGAGTGACCTCACCATCCAACAGGAGCACCCTAGT +
Preference number: 3 (lower is better)
Translates to: VAIHRIVVCIGI*SDLTIQQEHPS
Trigger: ACTAGGGTGCTCCTGTTGGATGGTGAGGTCACTCCATATGCCAATACAAACAACAATGCGGTGGATTGCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
3UTR CCA 72 bp AATCCAGAATTCAGGAGAGGAACATCGGGGAGAATGTaGGGTGGGGTGATGCCAAGAGGATTGTCATCATTT +
Preference number: 3 (lower is better)
Translates to: NPEFRRGTSGRM*GGVMPRGLSSF
Trigger: AAATGATGACAATCCTCTTGGCATCACCCCACCCCACATTCTCCCCGATGTTCCTCTCCTGAATTCTGGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341360.6
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR CCA 72 bp AGGAAGGTTTTCTCAGATCATGCTAGAATGGCTCTTTaGCCTCTCCCAAGGCTTCTGAACACTCATTCCCCA +
Preference number: 3 (lower is better)
Translates to: RKVFSDHARMAL*PLPRLLNTHSP
Trigger: TGGGGAATGAGTGTTCAGAAGCCTTGGGAGAGGCCAAAGAGCCATTCTAGCATGATCTGAGAAAACCTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR CAA 90 bp GAGCCCACAAAAGTCTGCTTTGATGGTCTGTCTTGTCCTAGATTTGGCAGCGTCCCAAACTTAGAAGCCTaGTCAGGATTTTCCTCCTCT +
Preference number: 3 (lower is better)
Translates to: EPTKVCFDGLSCPRFGSVPNLEA*SGFSSS
Trigger: AGAGGAGGAAAATCCTGACAAGGCTTCTAAGTTTGG...GACGCTGCCAAATCTAGGACAAGACAGACCATCAAAGCAGACTTTTGTGGGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367218.7
3UTR-3UTR CAA 90 bp AAAGTCTGCTTTGATGGTCTGTCTTGTCCTAGATTTGGCAGCGTCTGGTCCTCATTCACTTGGGGATATTaGTCTCCCTCTGAACCCTCA +
Preference number: 3 (lower is better)
Translates to: KVCFDGLSCPRFGSVWSSFTWGY*SPSEPS
Trigger: TGAGGGTTCAGAGGGAGACAAATATCCCCAAGTGAA...TGAGGACCAGACGCTGCCAAATCTAGGACAAGACAGACCATCAAAGCAGACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR CAA 90 bp GAGCTGCACTTGGTTGCAATCCACCGCATTGTTGTTTGTATTGGCGAATTCAGGGCTGTGGATGGACTTTaGGTTGTAGGGTTTCTGAAT +
Preference number: 3 (lower is better)
Translates to: ELHLVAIHRIVVCIGEFRAVDGL*VVGFLN
Trigger: ATTCAGAAACCCTACAACCAAAAGTCCATCCACAGC...CCTGAATTCGCCAATACAAACAACAATGCGGTGGATTGCAACCAAGTGCAGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484746.1
3UTR-3UTR CAA 90 bp GAGCCCACAAAAGTCTGCTTTGATGGTCTGTCTTGTCCTAGATTTGGCAGCGTCGCATTGTTGTTTGTATaGGCATATGGAGTGACCTCA +
Preference number: 3 (lower is better)
Translates to: EPTKVCFDGLSCPRFGSVALLFV*AYGVTS
Trigger: TGAGGTCACTCCATATGCCAATACAAACAACAATGC...GACGCTGCCAAATCTAGGACAAGACAGACCATCAAAGCAGACTTTTGTGGGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367218.7
3UTR-3UTR CAA 90 bp TCTGGAACTAAATCAAGGGTTCTTTTGGGCCAAAAGGGAGAAGGATCTAAGTTTGGGAGCTGCACTTGGTaGCAATCCACCGCATTGTTG +
Preference number: 3 (lower is better)
Translates to: SGTKSRVLLGQKGEGSKFGSCTW*QSTALL
Trigger: CAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCC...AAACTTAGATCCTTCTCCCTTTTGGCCCAAAAGAACCCTTGATTTAGTTCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR CAA 90 bp AAAGTCTGCTTTGATGGTCTGTCTTGTCCTAGATTTGGCAGCGTCTGGTCCTCACGCAACATATTTCACTaGGGGATATTTGTCTCCCTC +
Preference number: 3 (lower is better)
Translates to: KVCFDGLSCPRFGSVWSSRNIFH*GIFVSL
Trigger: GAGGGAGACAAATATCCCCAAGTGAAATATGTTGCG...TGAGGACCAGACGCTGCCAAATCTAGGACAAGACAGACCATCAAAGCAGACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR CAA 90 bp GGCTGGAATGGCTTAACAATAGCAGGCATTTATAAGTGCCCACCCTCACCAATGAAATCAAGGGTTCTTTaGGGCCAAAAGGGAGAAGGA +
Preference number: 3 (lower is better)
Translates to: GWNGLTIAGIYKCPPSPMKSRVL*GQKGEG
Trigger: TCCTTCTCCCTTTTGGCCCAAAAGAACCCTTGATTT...CATTGGTGAGGGTGGGCACTTATAAATGCCTGCTATTGTTAAGCCATTCCAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR CAA 90 bp GTGATCTCTCTCTTAACCCCTTTAGGGACAGGAGAGTCATTCCAGAGGACAGATCCACAAAAGTCTGCTTaGATGGTCTGTCTTGTCCTA +
Preference number: 3 (lower is better)
Translates to: VISLLTPLGTGESFQRTDPQKSA*MVCLVL
Trigger: TAGGACAAGACAGACCATCAAAGCAGACTTTTGTGG...ATCTGTCCTCTGGAATGACTCTCCTGTCCCTAAAGGGGTTAAGAGAGAGATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR CAA 90 bp GCAAAAATTAGAATCAGAAACTGGAGAGAATGTCGAAGCTGGTCCCCAGGCACCCCACAAAAGTCTGCTTaGATGGTCTGTCTTGTCCTA +
Preference number: 3 (lower is better)
Translates to: AKIRIRNWRECRSWSPGTPQKSA*MVCLVL
Trigger: TAGGACAAGACAGACCATCAAAGCAGACTTTTGTGG...GGTGCCTGGGGACCAGCTTCGACATTCTCTCCAGTTTCTGATTCTAATTTTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR CAA 90 bp TACCACTCTGCCAGCTATTCTTCAAGAAACACAAATCCAACAGAGGCCCCTGATCCACCGCATTGTTGTTaGTATTGGCGAATTCAGGGT +
Preference number: 3 (lower is better)
Translates to: YHSASYSSRNTNPTEAPDPPHCC*YWRIQG
Trigger: ACCCTGAATTCGCCAATACAAACAACAATGCGGTGG...ATCAGGGGCCTCTGTTGGATTTGTGTTTCTTGAAGAATAGCTGGCAGAGTGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484746.1
3UTR TCA 72 bp AGACACAAGCCCTCAAGGGTAACCTGTCAGGCACCATaGGAACCTTTTGTGAACAGGAATGGTAAAATAGCC +
Preference number: 3 (lower is better)
Translates to: RHKPSRVTCQAP*EPFVNRNGKIA
Trigger: GGCTATTTTACCATTCCTGTTCACAAAAGGTTCTCATGGTGCCTGACAGGTTACCCTTGAGGGCTTGTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR TCA 72 bp CCCTTTAGGGACAGGAGAGTCATTCCAGAGGACAGATaGTACTATGGGAAGGATCTAGCCTTAAGACTGTCA +
Preference number: 3 (lower is better)
Translates to: PFRDRRVIPEDR*YYGKDLALRLS
Trigger: TGACAGTCTTAAGGCTAGATCCTTCCCATAGTATCATCTGTCCTCTGGAATGACTCTCCTGTCCCTAAAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR CAA 90 bp TACCACTCTGCCAGCTATTCTTCAAGAAACACAAATCCAACAGAGGCCCCTGATGCTGTGGATGGACTTTaGGTTGTAGGGTTTCTGAAT +
Preference number: 3 (lower is better)
Translates to: YHSASYSSRNTNPTEAPDAVDGL*VVGFLN
Trigger: ATTCAGAAACCCTACAACCAAAAGTCCATCCACAGC...ATCAGGGGCCTCTGTTGGATTTGTGTTTCTTGAAGAATAGCTGGCAGAGTGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR CAA 90 bp GGCTGGAATGGCTTAACAATAGCAGGCATTTATAAGTGCCCACCCTCACCAATGATACATCCCCTCTTCTaGACTCTCATCACTCTAGAA +
Preference number: 3 (lower is better)
Translates to: GWNGLTIAGIYKCPPSPMIHPLF*TLITLE
Trigger: TTCTAGAGTGATGAGAGTCAAGAAGAGGGGATGTAT...CATTGGTGAGGGTGGGCACTTATAAATGCCTGCTATTGTTAAGCCATTCCAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR CAA 90 bp TACCACTCTGCCAGCTATTCTTCAAGAAACACAAATCCAACAGAGGCCCCTGATCAATCCACCGCATTGTaGTTTGTATTGGCATATGGA +
Preference number: 3 (lower is better)
Translates to: YHSASYSSRNTNPTEAPDQSTAL*FVLAYG
Trigger: TCCATATGCCAATACAAACAACAATGCGGTGGATTG...ATCAGGGGCCTCTGTTGGATTTGTGTTTCTTGAAGAATAGCTGGCAGAGTGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367218.7
3UTR-3UTR CAA 90 bp TGCACAGCAGTATTGGTTTCTGTTCATCAGCAAAAAGCTTTATTGGCTCCAACACTCTCACATGGGAATTaGGCCGTTCATACATCCCCT +
Preference number: 3 (lower is better)
Translates to: CTAVLVSVHQQKALLAPTLSHGN*AVHTSP
Trigger: AGGGGATGTATGAACGGCCAAATTCCCATGTGAGAG...TGTTGGAGCCAATAAAGCTTTTTGCTGATGAACAGAAACCAATACTGCTGTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR TCA 72 bp TGTATACCACACATATGCAACCTTCATGGGCAAGGCTaGTCTCCCTGGCACTTAAGAACCACATACACTTTA +
Preference number: 3 (lower is better)
Translates to: CIPHICNLHGQG*SPWHLRTTYTL
Trigger: TAAAGTGTATGTGGTTCTTAAGTGCCAGGGAGATCAGCCTTGCCCATGAAGGTTGCATATGTGTGGTATACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR TCA 72 bp GAAAGGCTGGGACCTTCTCAGAGACTGGAAAAGTTGTaGCACGTGGCAAAAATTAGAATCAGAAACTGGAGA +
Preference number: 3 (lower is better)
Translates to: ERLGPSQRLEKL*HVAKIRIRNWR
Trigger: TCTCCAGTTTCTGATTCTAATTTTTGCCACGTGTCACAACTTTTCCAGTCTCTGAGAAGGTCCCAGCCTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR CAA 90 bp ATGAAAAATGCAAACCCCAAATCAGAGTATCCTTATAGACCAGGAGATATTCGTTGGGAAGGGGATGCTTaGGGCAGTATTCAGGGGAAA +
Preference number: 3 (lower is better)
Translates to: MKNANPKSEYPYRPGDIRWEGDA*GSIQGK
Trigger: TTTCCCCTGAATACTGCCCAAAGCATCCCCTTCCCA...ACGAATATCTCCTGGTCTATAAGGATACTCTGATTTGGGGTTTGCATTTTTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR CAA 90 bp TGTCCAGAGGGATTTCTAGGTGATCTCTCTCTTAACCCCTTTAGGGACAGGAGAATCCAAAGCACCATTTaGGGGAAAAGTGTTATTAAC +
Preference number: 3 (lower is better)
Translates to: CPEGFLGDLSLNPFRDRRIQSTI*GKSVIN
Trigger: GTTAATAACACTTTTCCCCAAAATGGTGCTTTGGAT...TCTCCTGTCCCTAAAGGGGTTAAGAGAGAGATCACCTAGAAATCCCTCTGGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR CAA 90 bp CTGGCGGATTTTATACATTCCATCTCTACCGCAACATATTTCACTTGGGGATATCCAAACTTAGAAGCCTaGTCAGGATTTTCCTCCTCT +
Preference number: 3 (lower is better)
Translates to: LADFIHSISTATYFTWGYPNLEA*SGFSSS
Trigger: AGAGGAGGAAAATCCTGACAAGGCTTCTAAGTTTGG...ATATCCCCAAGTGAAATATGTTGCGGTAGAGATGGAATGTATAAAATCCGCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
3UTR-3UTR CAA 90 bp AGTGTTATTAACTTATGCCATATTTACCCACTGCCAGTTGGATCAGTGAAACTGAAATCAAGGGTTCTTTaGGGCCAAAAGGGAGAAGGA +
Preference number: 3 (lower is better)
Translates to: SVINLCHIYPLPVGSVKLKSRVL*GQKGEG
Trigger: TCCTTCTCCCTTTTGGCCCAAAAGAACCCTTGATTT...CAGTTTCACTGATCCAACTGGCAGTGGGTAAATATGGCATAAGTTAATAACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR CAA 90 bp GGAGAAAACATGAACCAAAGGCCAATTCAGTTATGGGAGCTCATCTCCTTCCATTATAAAGATGGCTGTTaGCAGAAAGAAAGTATGGTG +
Preference number: 3 (lower is better)
Translates to: GENMNQRPIQLWELISFHYKDGC*QKESMV
Trigger: CACCATACTTTCTTTCTGCAAACAGCCATCTTTATA...ATGGAAGGAGATGAGCTCCCATAACTGAATTGGCCTTTGGTTCATGTTTTCTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR CAA 90 bp CTGGCGGATTTTATACATTCCATCTCTACCGCAACATATTTCACTTGGGGATATTTGCAATCCACCGCATaGTTGTTTGTATTGGCGAAT +
Preference number: 3 (lower is better)
Translates to: LADFIHSISTATYFTWGYLQSTA*LFVLAN
Trigger: ATTCGCCAATACAAACAACAATGCGGTGGATTGCAA...ATATCCCCAAGTGAAATATGTTGCGGTAGAGATGGAATGTATAAAATCCGCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484746.1
3UTR-3UTR CAA 90 bp GTATTGGTTTCTGTTCATCAGCAAAAAGCTTTATTGGCTCCAACAAATTATCCCCGCAACATATTTCACTaGGGGATATTTGTCTCCCTC +
Preference number: 3 (lower is better)
Translates to: VLVSVHQQKALLAPTNYPRNIFH*GIFVSL
Trigger: GAGGGAGACAAATATCCCCAAGTGAAATATGTTGCG...GGGATAATTTGTTGGAGCCAATAAAGCTTTTTGCTGATGAACAGAAACCAATAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR CAA 90 bp AAAAGTTGTGACACGTGGCAAAAATTAGAATCAGAAACTGGAGAGAATGTCGAACCACAAAAGTCTGCTTaGATGGTCTGTCTTGTCCTA +
Preference number: 3 (lower is better)
Translates to: KSCDTWQKLESETGENVEPQKSA*MVCLVL
Trigger: TAGGACAAGACAGACCATCAAAGCAGACTTTTGTGG...TTCGACATTCTCTCCAGTTTCTGATTCTAATTTTTGCCACGTGTCACAACTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR CAA 90 bp CCAAATCAGAGTATCCTTATAGACCAGGAGATATTCGTGTCTTTTATACCACTCCAATCCACCGCATTGTaGTTTGTATTGGCGAATTCA +
Preference number: 3 (lower is better)
Translates to: PNQSILIDQEIFVSFIPLQSTAL*FVLANS
Trigger: TGAATTCGCCAATACAAACAACAATGCGGTGGATTG...GAGTGGTATAAAAGACACGAATATCTCCTGGTCTATAAGGATACTCTGATTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484746.1
3UTR TCA 72 bp TCAAAATGCAAATATAGATTGGGTGCACTGTTAAGCTaGATTGCAAATTATGGCAACACACACTGGACTGGG +
Preference number: 3 (lower is better)
Translates to: SKCKYRLGALLS*IANYGNTHWTG
Trigger: CCCAGTCCAGTGTGTGTTGCCATAATTTGCAATTCAGCTTAACAGTGCACCCAATCTATATTTGCATTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR CCA 72 bp ACTGGTTGGATTCTGGAACTAAATCAAGGGTTCTTTTaGGCCAAAAGGGAGAAGGATCTAAGTTTACACAAT +
Preference number: 3 (lower is better)
Translates to: TGWILELNQGFF*AKREKDLSLHN
Trigger: ATTGTGTAAACTTAGATCCTTCTCCCTTTTGGCCCAAAAGAACCCTTGATTTAGTTCCAGAATCCAACCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR CCA 72 bp AGAATATTTGAGAAAGGCTGGGACCTTCTCAGAGACTaGAAAAGTTGTGACACGTGGCAAAAATTAGAATCA +
Preference number: 3 (lower is better)
Translates to: RIFEKGWDLLRD*KSCDTWQKLES
Trigger: TGATTCTAATTTTTGCCACGTGTCACAACTTTTCCAGTCTCTGAGAAGGTCCCAGCCTTTCTCAAATATTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR CCA 72 bp AAGCTGAATTGCAAATTATGGCAACACACACTGGACTaGGGTATACGTTGCTTTGATATCACCATTTGTTTG +
Preference number: 3 (lower is better)
Translates to: KLNCKLWQHTLD*GIRCFDITICL
Trigger: CAAACAAATGGTGATATCAAAGCAACGTATACCCCAGTCCAGTGTGTGTTGCCATAATTTGCAATTCAGCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR CAA 90 bp TGCACAGCAGTATTGGTTTCTGTTCATCAGCAAAAAGCTTTATTGGCTCCAACAATCCAAAGCACCATTTaGGGGAAAAGTGTTATTAAC +
Preference number: 3 (lower is better)
Translates to: CTAVLVSVHQQKALLAPTIQSTI*GKSVIN
Trigger: GTTAATAACACTTTTCCCCAAAATGGTGCTTTGGAT...TGTTGGAGCCAATAAAGCTTTTTGCTGATGAACAGAAACCAATACTGCTGTGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR-3UTR CAA 90 bp AACTTAGCTTATAAATGGCACAGACTTGTAGGACAAAATCCAGAATTCAGGAGATTGCAATCCACCGCATaGTTGTTTGTATTGGCATAT +
Preference number: 3 (lower is better)
Translates to: NLAYKWHRLVGQNPEFRRLQSTA*LFVLAY
Trigger: ATATGCCAATACAAACAACAATGCGGTGGATTGCAA...TCTCCTGAATTCTGGATTTTGTCCTACAAGTCTGTGCCATTTATAAGCTAAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR TCA 90 bp GCAGGCATTTATAAGTGCCCACCCTCACCAATGCATCGGGGGTGGTCCCTAGATGAGGGTAGGGTGGGGTaGCCACCCACCAGTCTCCCC +
Preference number: 4 (lower is better)
Translates to: AGIYKCPPSPMHRGWSLDEGRVG*PPTSLP
Trigger: GGGGAGACTGGTGGGTGGTCACCCCACCCTACCCTC...ATCTAGGGACCACCCCCGATGCATTGGTGAGGGTGGGCACTTATAAATGCCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR GCA 90 bp AGGGCTTTACTGGGCAGCAGCTGGAGCATGTGGCTGAAGCGGGGCTGGAGGAAGCCAGGCGAGTCAGCTTaGCCTGCAGCACTGACTTCT +
Preference number: 4 (lower is better)
Translates to: RALLGSSWSMWLKRGWRKPGESA*PAALTS
Trigger: AGAAGTCAGTGCTGCAGGGCAAGCTGACTCGCCTGG...CTTCCTCCAGCCCCGCTTCAGCCACATGCTCCAGCTGCTGCCCAGTAAAGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CCA 90 bp AGGGCTTTACTGGGCAGCAGCTGGAGCATGTGGCTGAAGCGGGGCTGGAGGAAGAGAGAGCTGTCCGACTaGGGGAGCTGCACTTGGTTG +
Preference number: 4 (lower is better)
Translates to: RALLGSSWSMWLKRGWRKRELSD*GSCTWL
Trigger: CAACCAAGTGCAGCTCCCCCAGTCGGACAGCTCTCT...CTTCCTCCAGCCCCGCTTCAGCCACATGCTCCAGCTGCTGCCCAGTAAAGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR GCA 90 bp AGGGCTTTACTGGGCAGCAGCTGGAGCATGTGGCTGAAGCGGGGCTGGAGGAAGTGCTACATCTGTGCCTaGGATGCCCATGGCAAAACC +
Preference number: 4 (lower is better)
Translates to: RALLGSSWSMWLKRGWRKCYICA*DAHGKT
Trigger: GGTTTTGCCATGGGCATCGCAGGCACAGATGTAGCA...CTTCCTCCAGCCCCGCTTCAGCCACATGCTCCAGCTGCTGCCCAGTAAAGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CCA 90 bp CTAGCAAAGTCCCCAACTCCTGAGAGGCAGATGGGAAGGGGATGCTTTGGGCAGCCCCTGCCCCTCCAATaGGAAGGACCTCTCAGGTTC +
Preference number: 4 (lower is better)
Translates to: LAKSPTPERQMGRGCFGQPLPLQ*EGPLRF
Trigger: GAACCTGAGAGGTCCTTCCCATTGGAGGGGCAGGGG...CTGCCCAAAGCATCCCCTTCCCATCTGCCTCTCAGGAGTTGGGGACTTTGCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CCA 90 bp TCTCCCAAGGCTTCTGAACACTCATTCCCCACCAGTCAGGTCCTGCCCTGGAGAGCTCTCTTGCCTTTCTaGCTAAGGCCGGGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: SPKASEHSFPTSQVLPWRALLPF*LRPGSG
Trigger: CCCACTCCCCGGCCTTAGCCAGAAAGGCAAGAGAGC...TCTCCAGGGCAGGACCTGACTGGTGGGGAATGAGTGTTCAGAAGCCTTGGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CCA 90 bp TCTCCCAAGGCTTCTGAACACTCATTCCCCACCAGTCAGGTCCTGCCCTGGAGACCCTCCGGGTTTCCATaGATGAGGGTAGGGTGGGGT +
Preference number: 4 (lower is better)
Translates to: SPKASEHSFPTSQVLPWRPSGFP*MRVGWG
Trigger: ACCCCACCCTACCCTCATCCATGGAAACCCGGAGGG...TCTCCAGGGCAGGACCTGACTGGTGGGGAATGAGTGTTCAGAAGCCTTGGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CCA 90 bp AGGGCTTTACTGGGCAGCAGCTGGAGCATGTGGCTGAAGCGGGGCTGGAGGAAGGCTAGAATGGCTCTTTaGCCTCTCCCAAGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: RALLGSSWSMWLKRGWRKARMAL*PLPRLL
Trigger: CAGAAGCCTTGGGAGAGGCCAAAGAGCCATTCTAGC...CTTCCTCCAGCCCCGCTTCAGCCACATGCTCCAGCTGCTGCCCAGTAAAGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR TCA 90 bp CTAGCAAAGTCCCCAACTCCTGAGAGGCAGATGGGAAGGGGATGCTTTGGGCAGTGGCCCGGGCTGTGTTaGTGTTGTCACCTGTCACCA +
Preference number: 4 (lower is better)
Translates to: LAKSPTPERQMGRGCFGQWPGLC*CCHLSP
Trigger: TGGTGACAGGTGACAACATCAACACAGCCCGGGCCA...CTGCCCAAAGCATCCCCTTCCCATCTGCCTCTCAGGAGTTGGGGACTTTGCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR TCA 90 bp GAGCCTTGGCAGATGGCTTTGAAAGCAGTGGTCACCCCAAAGAGGAGCCCACAACTGGGCGGGTGTCTCTaGTCTTGCTCTCTTCGGAGG +
Preference number: 4 (lower is better)
Translates to: EPWQMALKAVVTPKRSPQLGGCL*SCSLRR
Trigger: CCTCCGAAGAGAGCAAGATCAGAGACACCCGCCCAG...TTGTGGGCTCCTCTTTGGGGTGACCACTGCTTTCAAAGCCATCTGCCAAGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR GCA 90 bp GAGCCTTGGCAGATGGCTTTGAAAGCAGTGGTCACCCCAAAGAGGAGCCCACAAGTGACAGCCACGACCTaGCGGTGTTCCCCAACAGTG +
Preference number: 4 (lower is better)
Translates to: EPWQMALKAVVTPKRSPQVTATT*RCSPTV
Trigger: CACTGTTGGGGAACACCGGCAGGTCGTGGCTGTCAC...TTGTGGGCTCCTCTTTGGGGTGACCACTGCTTTCAAAGCCATCTGCCAAGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR GCA 90 bp ATCCAGGAGTGGTGTTCGTGGCAACTCCTCCTCTATGGCGAATTCAGGGTGGGTGTGACAGCCACGACCTaGCGGTGTTCCCCAACAGTG +
Preference number: 4 (lower is better)
Translates to: IQEWCSWQLLLYGEFRVGVTATT*RCSPTV
Trigger: CACTGTTGGGGAACACCGGCAGGTCGTGGCTGTCAC...ACCCACCCTGAATTCGCCATAGAGGAGGAGTTGCCACGAACACCACTCCTGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR GCA 90 bp TGGCAACTCCTCCTCTATGGCGAATTCAGGGTGGGTCATGAAGCTGTGGATGGACCACCAGTCAGGTCCTaGCCTGGAGAGCCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: WQLLLYGEFRVGHEAVDGPPVRS*PGEPWQ
Trigger: CTGCCAAGGCTCTCCAGGGCAGGACCTGACTGGTGG...TCCATCCACAGCTTCATGACCCACCCTGAATTCGCCATAGAGGAGGAGTTGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367218.7
CDS-3UTR CCA 90 bp CCTCCTCTTCCTCATCCAGGAGTGGTGTTCGTGGCAACTCCTCCTCTATGGCGAAGAGAGCTGTCCGACTaGGGGAGCTGCACTTGGTTG +
Preference number: 4 (lower is better)
Translates to: PPLPHPGVVFVATPPLWRRELSD*GSCTWL
Trigger: CAACCAAGTGCAGCTCCCCCAGTCGGACAGCTCTCT...TCGCCATAGAGGAGGAGTTGCCACGAACACCACTCCTGGATGAGGAAGAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR CCA 90 bp GAGCCTTGGCAGATGGCTTTGAAAGCAGTGGTCACCCCAAAGAGGAGCCCACAATGGATGAGGGTAGGGTaGGGTGACCACCCACCAGTC +
Preference number: 4 (lower is better)
Translates to: EPWQMALKAVVTPKRSPQWMRVG*GDHPPV
Trigger: GACTGGTGGGTGGTCACCCCACCCTACCCTCATCCA...TTGTGGGCTCCTCTTTGGGGTGACCACTGCTTTCAAAGCCATCTGCCAAGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CCA 90 bp CTAGCAAAGTCCCCAACTCCTGAGAGGCAGATGGGAAGGGGATGCTTTGGGCAGGGCACAGGGCTTTACTaGGCAGCAGCTGGAGCATGT +
Preference number: 4 (lower is better)
Translates to: LAKSPTPERQMGRGCFGQGTGLY*AAAGAC
Trigger: ACATGCTCCAGCTGCTGCCCAGTAAAGCCCTGTGCC...CTGCCCAAAGCATCCCCTTCCCATCTGCCTCTCAGGAGTTGGGGACTTTGCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp AGGGCTTTACTGGGCAGCAGCTGGAGCATGTGGCTGAAGCGGGGCTGGAGGAAGTTGGCGAATTCAGGGTaGGTCATGAAGCTGTGGATG +
Preference number: 4 (lower is better)
Translates to: RALLGSSWSMWLKRGWRKLANSG*VMKLWM
Trigger: CATCCACAGCTTCATGACCCACCCTGAATTCGCCAA...CTTCCTCCAGCCCCGCTTCAGCCACATGCTCCAGCTGCTGCCCAGTAAAGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484746.1
CDS-3UTR TCA 90 bp GAGCTGTCCGACTGGGGGAGCTGCACTTGGTTGCAATCCACCGCATTGTTGTTTGGCCAGAACCTTCCATaGCATGGGTCCCTGAGAGCA +
Preference number: 4 (lower is better)
Translates to: ELSDWGSCTWLQSTALLFGQNLP*HGSLRA
Trigger: TGCTCTCAGGGACCCATGTCATGGAAGGTTCTGGCC...AAACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCCCCAGTCGGACAGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR TCA 90 bp AGCTGTCCGACTGGGGGAGCTGCACTTGGTTGCAATCCACCGCATTGTTGTTTGTGGCCCGGGCTGTGTTaGTGTTGTCACCTGTCACCA +
Preference number: 4 (lower is better)
Translates to: SCPTGGAALGCNPPHCCLWPGLC*CCHLSP
Trigger: TGGTGACAGGTGACAACATCAACACAGCCCGGGCCA...CAAACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCCCCAGTCGGACAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR CCA 90 bp CCTCCTCTTCCTCATCCAGGAGTGGTGTTCGTGGCAACTCCTCCTCTATGGCGATGTGCCACGCCCCTCTaGGTTTTCAGCAGTGAGGTA +
Preference number: 4 (lower is better)
Translates to: PPLPHPGVVFVATPPLWRCATPL*VFSSEV
Trigger: TACCTCACTGCTGAAAACCCAGAGGGGCGTGGCACA...TCGCCATAGAGGAGGAGTTGCCACGAACACCACTCCTGGATGAGGAAGAGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367218.7
CDS-3UTR TCA 90 bp AGCTGTCCGACTGGGGGAGCTGCACTTGGTTGCAATCCACCGCATTGTTGTTTGAGACACCACAGCCACTaGGACAGGCTGAGGCTTGTA +
Preference number: 4 (lower is better)
Translates to: SCPTGGAALGCNPPHCCLRHHSH*DRLRLV
Trigger: TACAAGCCTCAGCCTGTCTCAGTGGCTGTGGTGTCT...CAAACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCCCCAGTCGGACAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR TCA 90 bp CACAGACTTGTAGGACAAAATCCAGAATTCAGGAGAGGAACATCGGGGAGAATGGAGGGTAGGGTGGGGTaGCCACCCACCAGTCTCCCC +
Preference number: 4 (lower is better)
Translates to: HRLVGQNPEFRRGTSGRMEGRVG*PPTSLP
Trigger: GGGGAGACTGGTGGGTGGTCACCCCACCCTACCCTC...CATTCTCCCCGATGTTCCTCTCCTGAATTCTGGATTTTGTCCTACAAGTCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR GCA 90 bp GAGTGGTGTTCGTGGCAACTCCTCCTCTATGGCGAATTCAGGGTGGGTCATGAATTTGCTCCTGTTCAATaGGGCACTGCAGCCCCCGGA +
Preference number: 4 (lower is better)
Translates to: EWCSWQLLLYGEFRVGHEFAPVQ*GTAAPG
Trigger: TCCGGGGGCTGCAGTGCCGCATTGAACAGGAGCAAA...TTCATGACCCACCCTGAATTCGCCATAGAGGAGGAGTTGCCACGAACACCACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR GCA 90 bp AGGGCTTTACTGGGCAGCAGCTGGAGCATGTGGCTGAAGCGGGGCTGGAGGAAGTTTAGGCACCTTGACTaGCTTCTTGTCCTTTTCCTC +
Preference number: 4 (lower is better)
Translates to: RALLGSSWSMWLKRGWRKFRHLD*LLVLFL
Trigger: GAGGAAAAGGACAAGAAGGCAGTCAAGGTGCCTAAA...CTTCCTCCAGCCCCGCTTCAGCCACATGCTCCAGCTGCTGCCCAGTAAAGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR GCA 90 bp TGGCAACTCCTCCTCTATGGCGAATTCAGGGTGGGTCATGAAGCTGTGGATGGACCAGGCGAGTCAGCTTaGCCTGCAGCACTGACTTCT +
Preference number: 4 (lower is better)
Translates to: WQLLLYGEFRVGHEAVDGPGESA*PAALTS
Trigger: AGAAGTCAGTGCTGCAGGGCAAGCTGACTCGCCTGG...TCCATCCACAGCTTCATGACCCACCCTGAATTCGCCATAGAGGAGGAGTTGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR GCA 90 bp GAAACTGGAGAGAATGTCGAAGCTGGTCCCCAGGCACCTAAGCTCAAGGTTTCTCTCGGGCCAGACTCTTaGTCACCAGCTCTCCCCAAG +
Preference number: 4 (lower is better)
Translates to: ETGENVEAGPQAPKLKVSLGPDS*SPALPK
Trigger: CTTGGGGAGAGCTGGTGAGCAAGAGTCTGGCCCGAG...AGAAACCTTGAGCTTAGGTGCCTGGGGACCAGCTTCGACATTCTCTCCAGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367218.7
CDS-3UTR CCA 90 bp CTAGCAAAGTCCCCAACTCCTGAGAGGCAGATGGGAAGGGGATGCTTTGGGCAGAGGGCCACTCCGTCTTaGGTCTTTGCTTTGTTGCGA +
Preference number: 4 (lower is better)
Translates to: LAKSPTPERQMGRGCFGQRATPS*VFALLR
Trigger: TCGCAACAAAGCAAAGACCCAAGACGGAGTGGCCCT...CTGCCCAAAGCATCCCCTTCCCATCTGCCTCTCAGGAGTTGGGGACTTTGCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CCA 90 bp AGCTGTCCGACTGGGGGAGCTGCACTTGGTTGCAATCCACCGCATTGTTGTTTGTTTGGCAATAGCATCTaGCACCTCTGGGCGCACAGG +
Preference number: 4 (lower is better)
Translates to: SCPTGGAALGCNPPHCCLFGNSI*HLWAHR
Trigger: CCTGTGCGCCCAGAGGTGCCAGATGCTATTGCCAAA...CAAACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCCCCAGTCGGACAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR CCA 90 bp CTAGCAAAGTCCCCAACTCCTGAGAGGCAGATGGGAAGGGGATGCTTTGGGCAGTGCCTGCGATGCCCATaGCAAAACCAACATCCGCTT +
Preference number: 4 (lower is better)
Translates to: LAKSPTPERQMGRGCFGQCLRCP*QNQHPL
Trigger: AAGCGGATGTTGGTTTTGCCATGGGCATCGCAGGCA...CTGCCCAAAGCATCCCCTTCCCATCTGCCTCTCAGGAGTTGGGGACTTTGCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CCA 90 bp AGGGCTTTACTGGGCAGCAGCTGGAGCATGTGGCTGAAGCGGGGCTGGAGGAAGAAAGAGGCTCCCGTCTaGAATGTGTTAATTACGTCG +
Preference number: 4 (lower is better)
Translates to: RALLGSSWSMWLKRGWRKKEAPV*NVLITS
Trigger: CGACGTAATTAACACATTCCAGACGGGAGCCTCTTT...CTTCCTCCAGCCCCGCTTCAGCCACATGCTCCAGCTGCTGCCCAGTAAAGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp AGCTGTCCGACTGGGGGAGCTGCACTTGGTTGCAATCCACCGCATTGTTGTTTGACATCGGGGAGAATGTaGGGTGGGGTGATGCCAAGA +
Preference number: 4 (lower is better)
Translates to: SCPTGGAALGCNPPHCCLTSGRM*GGVMPR
Trigger: TCTTGGCATCACCCCACCCCACATTCTCCCCGATGT...CAAACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCCCCAGTCGGACAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp CTAGCAAAGTCCCCAACTCCTGAGAGGCAGATGGGAAGGGGATGCTTTGGGCAGTGCCCTGGAGAGCCTTaGCAGATGGCTTTGAAAGCA +
Preference number: 4 (lower is better)
Translates to: LAKSPTPERQMGRGCFGQCPGEP*QMALKA
Trigger: TGCTTTCAAAGCCATCTGCCAAGGCTCTCCAGGGCA...CTGCCCAAAGCATCCCCTTCCCATCTGCCTCTCAGGAGTTGGGGACTTTGCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp CCTGAATGGGGTTTGACTGGGTCCCGCTACAAACCCCAAGTCAAGCTTAAGTTGAGTCAGGTCCTGCCCTaGAGAGCCTTGGCAGATGGC +
Preference number: 4 (lower is better)
Translates to: PEWGLTGSRYKPQVKLKLSQVLP*RALADG
Trigger: GCCATCTGCCAAGGCTCTCCAGGGCAGGACCTGACT...CAACTTAAGCTTGACTTGGGGTTTGTAGCGGGACCCAGTCAAACCCCATTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp GCTCATCTCCTTCCATCTCTCCTAATCAAGAGCAAAGGGAACAGCAGGCCTAACAGCAGCTGGAGCATGTaGCTGAAGCGGGGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: AHLLPSLLIKSKGNSRPNSSWSM*LKRGWR
Trigger: CCTCCAGCCCCGCTTCAGCCACATGCTCCAGCTGCT...GTTAGGCCTGCTGTTCCCTTTGCTCTTGATTAGGAGAGATGGAAGGAGATGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp AGCTGTCCGACTGGGGGAGCTGCACTTGGTTGCAATCCACCGCATTGTTGTTTGTGTGCCACGCCCCTCTaGGTTTTCAGCAGTGAGGTA +
Preference number: 4 (lower is better)
Translates to: SCPTGGAALGCNPPHCCLCATPL*VFSSEV
Trigger: TACCTCACTGCTGAAAACCCAGAGGGGCGTGGCACA...CAAACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCCCCAGTCGGACAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367218.7
ENST00000484746.1
CDS-3UTR TCA 90 bp AATCTCCTAGCAAAGTCCCCAACTCCTGAGAGGCAGATGGGAAGGGGATGCTTTGACTCCGTGTCACGATaGTTGGTGTCCCCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: NLLAKSPTPERQMGRGCFDSVSR*LVSPGG
Trigger: ACCACCTGGGGACACCAATCATCGTGACACGGAGTC...AAAGCATCCCCTTCCCATCTGCCTCTCAGGAGTTGGGGACTTTGCTAGGAGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR TCA 90 bp CCTGAATGGGGTTTGACTGGGTCCCGCTACAAACCCCAAGTCAAGCTTAAGTTGAGAGGATGGGGGAACTaGGTGGAAGGTGGACTCCGT +
Preference number: 4 (lower is better)
Translates to: PEWGLTGSRYKPQVKLKLRGWGN*VEGGLR
Trigger: ACGGAGTCCACCTTCCACTCAGTTCCCCCATCCTCT...CAACTTAAGCTTGACTTGGGGTTTGTAGCGGGACCCAGTCAAACCCCATTCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000357681.10
ENST00000367218.7
CDS-3UTR TCA 90 bp CCTCTCCCAAGGCTTCTGAACACTCATTCCCCACCAGTCAGGTCCTGCCCTGGATCTCTGGGGGCCCAGTaGGGGAATAGATTGAATATA +
Preference number: 4 (lower is better)
Translates to: PLPRLLNTHSPPVRSCPGSLGAQ*GNRLNI
Trigger: TATATTCAATCTATTCCCTCACTGGGCCCCCAGAGA...TCCAGGGCAGGACCTGACTGGTGGGGAATGAGTGTTCAGAAGCCTTGGGAGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR TCA 90 bp ATCCAGGAGTGGTGTTCGTGGCAACTCCTCCTCTATGGCGAATTCAGGGTGGGTAGGCAAGACACGGTCTaGTGGGTTCGTCATTTTGCC +
Preference number: 4 (lower is better)
Translates to: IQEWCSWQLLLYGEFRVGRQDTV*WVRHFA
Trigger: GGCAAAATGACGAACCCATCAGACCGTGTCTTGCCT...ACCCACCCTGAATTCGCCATAGAGGAGGAGTTGCCACGAACACCACTCCTGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR TCA 90 bp TTCCTCATCCAGGAGTGGTGTTCGTGGCAACTCCTCCTCTATGGCGAATTCAGGGGTCAGTGCATCCCTTaGACGCAGCTCCATGAGCTT +
Preference number: 4 (lower is better)
Translates to: FLIQEWCSWQLLLYGEFRGQCIP*TQLHEL
Trigger: AAGCTCATGGAGCTGCGTTCAAGGGATGCACTGACC...CCTGAATTCGCCATAGAGGAGGAGTTGCCACGAACACCACTCCTGGATGAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR TCA 90 bp GAGCCTTGGCAGATGGCTTTGAAAGCAGTGGTCACCCCAAAGAGGAGCCCACAAAGGCCATGGGCTCGATaGCAGTGCGTACCATATCAT +
Preference number: 4 (lower is better)
Translates to: EPWQMALKAVVTPKRSPQRPWAR*QCVPYH
Trigger: ATGATATGGTACGCACTGTCATCGAGCCCATGGCCT...TTGTGGGCTCCTCTTTGGGGTGACCACTGCTTTCAAAGCCATCTGCCAAGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR TCA 90 bp AATCTCCTAGCAAAGTCCCCAACTCCTGAGAGGCAGATGGGAAGGGGATGCTTTCCTCGGCATCCTTGGTaGTCTCCTCTTTGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: NLLAKSPTPERQMGRGCFPRHPW*SPLWWC
Trigger: GCACCACCAAAGAGGAGATCACCAAGGATGCCGAGG...AAAGCATCCCCTTCCCATCTGCCTCTCAGGAGTTGGGGACTTTGCTAGGAGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR TCA 90 bp TCTCCCAAGGCTTCTGAACACTCATTCCCCACCAGTCAGGTCCTGCCCTGGAGATGGTGGGGGAAGATTTaGCTGGTGCAACTGCTACAT +
Preference number: 4 (lower is better)
Translates to: SPKASEHSFPTSQVLPWRWWGKI*LVQLLH
Trigger: ATGTAGCAGTTGCACCAGTCAAATCTTCCCCCACCA...TCTCCAGGGCAGGACCTGACTGGTGGGGAATGAGTGTTCAGAAGCCTTGGGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367218.7
ENST00000484746.1
CDS-3UTR TCA 90 bp AGCTGTCCGACTGGGGGAGCTGCACTTGGTTGCAATCCACCGCATTGTTGTTTGCTTGGCAGATGGCTTTaGAAGCAGTGGTCACCCCAA +
Preference number: 4 (lower is better)
Translates to: SCPTGGAALGCNPPHCCLLGRWL*KQWSPQ
Trigger: TTGGGGTGACCACTGCTTTCAAAGCCATCTGCCAAG...CAAACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCCCCAGTCGGACAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367218.7
ENST00000484746.1
CDS-3UTR GCA 90 bp CCTCTCCCAAGGCTTCTGAACACTCATTCCCCACCAGTCAGGTCCTGCCCTGGATCAGTTCCATTACTGTaGAGCCAAAGTCCCCTTCAC +
Preference number: 4 (lower is better)
Translates to: PLPRLLNTHSPPVRSCPGSVPLL*SQSPLH
Trigger: GTGAAGGGGACTTTGGCTGCACAGTAATGGAACTGA...TCCAGGGCAGGACCTGACTGGTGGGGAATGAGTGTTCAGAAGCCTTGGGAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR GCA 90 bp ATCCAGGAGTGGTGTTCGTGGCAACTCCTCCTCTATGGCGAATTCAGGGTGGGTCCCCAGGTGTCAGAATaGCACATTTGGTGGCAATGG +
Preference number: 4 (lower is better)
Translates to: IQEWCSWQLLLYGEFRVGPQVSE*HIWWQW
Trigger: CCATTGCCACCAAATGTGGCATTCTGACACCTGGGG...ACCCACCCTGAATTCGCCATAGAGGAGGAGTTGCCACGAACACCACTCCTGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR GCA 90 bp GAGCCTTGGCAGATGGCTTTGAAAGCAGTGGTCACCCCAAAGAGGAGCCCACAACCCCAGGTGTCAGAATaGCACATTTGGTGGCAATGG +
Preference number: 4 (lower is better)
Translates to: EPWQMALKAVVTPKRSPQPQVSE*HIWWQW
Trigger: CCATTGCCACCAAATGTGGCATTCTGACACCTGGGG...TTGTGGGCTCCTCTTTGGGGTGACCACTGCTTTCAAAGCCATCTGCCAAGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR GCA 90 bp CCTCCTCTTCCTCATCCAGGAGTGGTGTTCGTGGCAACTCCTCCTCTATGGCGACCTTTCACCAGGGTGTaGTTGTCAGTGGGAGAAGAT +
Preference number: 4 (lower is better)
Translates to: PPLPHPGVVFVATPPLWRPFTRV*LSVGED
Trigger: ATCTTCTCCCACTGACAAGCACACCCTGGTGAAAGG...TCGCCATAGAGGAGGAGTTGCCACGAACACCACTCCTGGATGAGGAAGAGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR GCA 90 bp ACTGGGGGAGCTGCACTTGGTTGCAATCCACCGCATTGTTGTTTGTATTGGCATGTGACAGCCACGACCTaGCGGTGTTCCCCAACAGTG +
Preference number: 4 (lower is better)
Translates to: TGGAALGCNPPHCCLYWHVTATT*RCSPTV
Trigger: CACTGTTGGGGAACACCGGCAGGTCGTGGCTGTCAC...ATGCCAATACAAACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCCCCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR GCA 90 bp GCAGGCATTTATAAGTGCCCACCCTCACCAATGCATCGGGGGTGGTCCCTAGATTGCTACATCTGTGCCTaGGATGCCCATGGCAAAACC +
Preference number: 4 (lower is better)
Translates to: AGIYKCPPSPMHRGWSLDCYICA*DAHGKT
Trigger: GGTTTTGCCATGGGCATCGCAGGCACAGATGTAGCA...ATCTAGGGACCACCCCCGATGCATTGGTGAGGGTGGGCACTTATAAATGCCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR GCA 90 bp TTCCTCATCCAGGAGTGGTGTTCGTGGCAACTCCTCCTCTATGGCGAATTCAGGGGATCGGGTAGGTATTaGGGAGATGAACTGGCCCCA +
Preference number: 4 (lower is better)
Translates to: FLIQEWCSWQLLLYGEFRGSGRY*GDELAP
Trigger: TGGGGCCAGTTCATCTCCGCAATACCTACCCGATCC...CCTGAATTCGCCATAGAGGAGGAGTTGCCACGAACACCACTCCTGGATGAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR GCA 90 bp TTCCTCATCCAGGAGTGGTGTTCGTGGCAACTCCTCCTCTATGGCGAATTCAGGTCTTTGGTGGTGCCATaGCCAGCCTCCTTCAGGAAC +
Preference number: 4 (lower is better)
Translates to: FLIQEWCSWQLLLYGEFRSLVVP*PASFRN
Trigger: GTTCCTGAAGGAGGCTGGGCATGGCACCACCAAAGA...CCTGAATTCGCCATAGAGGAGGAGTTGCCACGAACACCACTCCTGGATGAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR CCA 90 bp GACCTCACCATCCAACAGGAGCACCCTAGTCCCAAACTTAGAAGCCTTGTCAGGCCGTGTCACGATGATTaGTGTCCCCAGGTGGTGATG +
Preference number: 4 (lower is better)
Translates to: DLTIQQEHPSPKLRSLVRPCHDD*CPQVVM
Trigger: CATCACCACCTGGGGACACCAATCATCGTGACACGG...CCTGACAAGGCTTCTAAGTTTGGGACTAGGGTGCTCCTGTTGGATGGTGAGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR CCA 90 bp AGGGCTTTACTGGGCAGCAGCTGGAGCATGTGGCTGAAGCGGGGCTGGAGGAAGTCACCGTATTTGACTTaGGCAATATCACCAACCACA +
Preference number: 4 (lower is better)
Translates to: RALLGSSWSMWLKRGWRKSPYLT*AISPTT
Trigger: TGTGGTTGGTGATATTGCCCAAGTCAAATACGGTGA...CTTCCTCCAGCCCCGCTTCAGCCACATGCTCCAGCTGCTGCCCAGTAAAGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CCA 90 bp AGGGCTTTACTGGGCAGCAGCTGGAGCATGTGGCTGAAGCGGGGCTGGAGGAAGTTCAGATCATTCCCTTaGATCAGGATTCCATCTGCA +
Preference number: 4 (lower is better)
Translates to: RALLGSSWSMWLKRGWRKFRSFP*IRIPSA
Trigger: TGCAGATGGAATCCTGATCCAAGGGAATGATCTGAA...CTTCCTCCAGCCCCGCTTCAGCCACATGCTCCAGCTGCTGCCCAGTAAAGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CCA 90 bp TGGCAACTCCTCCTCTATGGCGAATTCAGGGTGGGTCATGAAGCTGTGGATGGACAGGAGTGGTGTTCGTaGCAACTCCTCCTCTATGGC +
Preference number: 4 (lower is better)
Translates to: WQLLLYGEFRVGHEAVDGQEWCS*QLLLYG
Trigger: GCCATAGAGGAGGAGTTGCCACGAACACCACTCCTG...TCCATCCACAGCTTCATGACCCACCCTGAATTCGCCATAGAGGAGGAGTTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR CCA 90 bp CCTCTCCCAAGGCTTCTGAACACTCATTCCCCACCAGTCAGGTCCTGCCCTGGAGCTCTTGCCTCTTCATaGTCAGGTAGAGGTTCACTT +
Preference number: 4 (lower is better)
Translates to: PLPRLLNTHSPPVRSCPGALASS*SGRGSL
Trigger: AAGTGAACCTCTACCTGACCATGAAGAGGCAAGAGC...TCCAGGGCAGGACCTGACTGGTGGGGAATGAGTGTTCAGAAGCCTTGGGAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp ATGCAACCTTCATGGGCAAGGCTGATCTCCCTGGCACTTAAGAACCACATACACGCTCTCTTGCCTTTCTaGCTAAGGCCGGGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: MQPSWARLISLALKNHIHALLPF*LRPGSG
Trigger: CCCACTCCCCGGCCTTAGCCAGAAAGGCAAGAGAGC...GTGTATGTGGTTCTTAAGTGCCAGGGAGATCAGCCTTGCCCATGAAGGTTGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CCA 90 bp GAGCTGTCCGACTGGGGGAGCTGCACTTGGTTGCAATCCACCGCATTGTTGTTTTGCCCTGGAGAGCCTTaGCAGATGGCTTTGAAAGCA +
Preference number: 4 (lower is better)
Translates to: ELSDWGSCTWLQSTALLFCPGEP*QMALKA
Trigger: TGCTTTCAAAGCCATCTGCCAAGGCTCTCCAGGGCA...AAACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCCCCAGTCGGACAGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp TCTTTATGTTTCCTACTGTGGACAGCTCAGGTGAAAGGGGTGAGGGAGGACAGAAGTCAGGTCCTGCCCTaGAGAGCCTTGGCAGATGGC +
Preference number: 4 (lower is better)
Translates to: SLCFLLWTAQVKGVREDRSQVLP*RALADG
Trigger: GCCATCTGCCAAGGCTCTCCAGGGCAGGACCTGACT...TCTGTCCTCCCTCACCCCTTTCACCTGAGCTGTCCACAGTAGGAAACATAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp GAAACTGGAGAGAATGTCGAAGCTGGTCCCCAGGCACCTAAGCTCAAGGTTTCTTTACTGGGCAGCAGCTaGAGCATGTGGCTGAAGCGG +
Preference number: 4 (lower is better)
Translates to: ETGENVEAGPQAPKLKVSLLGSS*SMWLKR
Trigger: CCGCTTCAGCCACATGCTCCAGCTGCTGCCCAGTAA...AGAAACCTTGAGCTTAGGTGCCTGGGGACCAGCTTCGACATTCTCTCCAGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR TCA 90 bp TGGCAACTCCTCCTCTATGGCGAATTCAGGGTGGGTCATGAAGCTGTGGATGGATGTCCAGGGACTTCTTaGCATGGTCAGATTCCCCTG +
Preference number: 4 (lower is better)
Translates to: WQLLLYGEFRVGHEAVDGCPGTS*HGQIPL
Trigger: CAGGGGAATCTGACCATGTCAAGAAGTCCCTGGACA...TCCATCCACAGCTTCATGACCCACCCTGAATTCGCCATAGAGGAGGAGTTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR TCA 90 bp TTCTTTATGTTTCCTACTGTGGACAGCTCAGGTGAAAGGGGTGAGGGAGGACAGCACAGAGTAGGCCAGTaGGATGGTGACAGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: FFMFPTVDSSGERGEGGQHRVGQ*DGDSQR
Trigger: CCTCTGGCTGTCACCATCTCACTGGCCTACTCTGTG...CTGTCCTCCCTCACCCCTTTCACCTGAGCTGTCCACAGTAGGAAACATAAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR TCA 90 bp GAGTGGTGTTCGTGGCAACTCCTCCTCTATGGCGAATTCAGGGTGGGTCATGAACCTGCTTCAGATCTGTaGCAAAGCCTAGCAGAGCAC +
Preference number: 4 (lower is better)
Translates to: EWCSWQLLLYGEFRVGHEPASDL*QSLAEH
Trigger: GTGCTCTGCTAGGCTTTGTCACAGATCTGAAGCAGG...TTCATGACCCACCCTGAATTCGCCATAGAGGAGGAGTTGCCACGAACACCACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR TCA 90 bp GAGCTGTCCGACTGGGGGAGCTGCACTTGGTTGCAATCCACCGCATTGTTGTTTGTTGCGGTAGATGCCTaGAAAGACGTTCTTCTCTCC +
Preference number: 4 (lower is better)
Translates to: ELSDWGSCTWLQSTALLFVAVDA*KDVLLS
Trigger: GGAGAGAAGAACGTCTTTTCAGGCATCTACCGCAAC...AAACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCCCCAGTCGGACAGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR TCA 90 bp CCTGAATGGGGTTTGACTGGGTCCCGCTACAAACCCCAAGTCAAGCTTAAGTTGAGACACCACAGCCACTaGGACAGGCTGAGGCTTGTA +
Preference number: 4 (lower is better)
Translates to: PEWGLTGSRYKPQVKLKLRHHSH*DRLRLV
Trigger: TACAAGCCTCAGCCTGTCTCAGTGGCTGTGGTGTCT...CAACTTAAGCTTGACTTGGGGTTTGTAGCGGGACCCAGTCAAACCCCATTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000357681.10
ENST00000367218.7
CDS-3UTR TCA 90 bp GCAGGCATTTATAAGTGCCCACCCTCACCAATGCATCGGGGGTGGTCCCTAGATGTTCTCCAATCCCAATaGAGAGACACCACAGCCACT +
Preference number: 4 (lower is better)
Translates to: AGIYKCPPSPMHRGWSLDVLQSQ*RDTTAT
Trigger: AGTGGCTGTGGTGTCTCTTCATTGGGATTGGAGAAC...ATCTAGGGACCACCCCCGATGCATTGGTGAGGGTGGGCACTTATAAATGCCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR TCA 90 bp AGCTGTCCGACTGGGGGAGCTGCACTTGGTTGCAATCCACCGCATTGTTGTTTGTGGTGGGGGAAGATTTaGCTGGTGCAACTGCTACAT +
Preference number: 4 (lower is better)
Translates to: SCPTGGAALGCNPPHCCLWWGKI*LVQLLH
Trigger: ATGTAGCAGTTGCACCAGTCAAATCTTCCCCCACCA...CAAACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCCCCAGTCGGACAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000367218.7
ENST00000484746.1
CDS-3UTR TCA 90 bp GCAAAAATTAGAATCAGAAACTGGAGAGAATGTCGAAGCTGGTCCCCAGGCACCCTGGGCGGGTGTCTCTaGTCTTGCTCTCTTCGGAGG +
Preference number: 4 (lower is better)
Translates to: AKIRIRNWRECRSWSPGTLGGCL*SCSLRR
Trigger: CCTCCGAAGAGAGCAAGATCAGAGACACCCGCCCAG...GGTGCCTGGGGACCAGCTTCGACATTCTCTCCAGTTTCTGATTCTAATTTTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR GCA 90 bp GAGTGGTGTTCGTGGCAACTCCTCCTCTATGGCGAATTCAGGGTGGGTCATGAACTGACCAGTGTCTCCTaGCTCCCTGTCTCAACTTCT +
Preference number: 4 (lower is better)
Translates to: EWCSWQLLLYGEFRVGHELTSVS*LPVSTS
Trigger: AGAAGTTGAGACAGGGAGGCAGGAGACACTGGTCAG...TTCATGACCCACCCTGAATTCGCCATAGAGGAGGAGTTGCCACGAACACCACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR GCA 90 bp AGCTGTCCGACTGGGGGAGCTGCACTTGGTTGCAATCCACCGCATTGTTGTTTGATGGGTTCGTCATTTTaGCTGCTGTTACCAAGCCCC +
Preference number: 4 (lower is better)
Translates to: SCPTGGAALGCNPPHCCLMGSSF*LLLPSP
Trigger: GGGGCTTGGTAACAGCAGGCAAAATGACGAACCCAT...CAAACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCCCCAGTCGGACAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR GCA 90 bp TTCTTTATGTTTCCTACTGTGGACAGCTCAGGTGAAAGGGGTGAGGGAGGACAGTTTGCTCCTGTTCAATaGGGCACTGCAGCCCCCGGA +
Preference number: 4 (lower is better)
Translates to: FFMFPTVDSSGERGEGGQFAPVQ*GTAAPG
Trigger: TCCGGGGGCTGCAGTGCCGCATTGAACAGGAGCAAA...CTGTCCTCCCTCACCCCTTTCACCTGAGCTGTCCACAGTAGGAAACATAAAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR GCA 90 bp GCAGGCATTTATAAGTGCCCACCCTCACCAATGCATCGGGGGTGGTCCCTAGATGATCAGGATTCCATCTaGAGGCAGCAGATCACCGTA +
Preference number: 4 (lower is better)
Translates to: AGIYKCPPSPMHRGWSLDDQDSI*RQQITV
Trigger: TACGGTGATCTGCTGCCTGCAGATGGAATCCTGATC...ATCTAGGGACCACCCCCGATGCATTGGTGAGGGTGGGCACTTATAAATGCCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR GCA 90 bp AGCTGTCCGACTGGGGGAGCTGCACTTGGTTGCAATCCACCGCATTGTTGTTTGGGAGCTGCACTTGGTTaGAATCCACCGCATTGTTGT +
Preference number: 4 (lower is better)
Translates to: SCPTGGAALGCNPPHCCLGAALG*NPPHCC
Trigger: ACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCC...CAAACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCCCCAGTCGGACAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000367218.7
ENST00000484746.1
CDS-3UTR GCA 90 bp ACTGGGGGAGCTGCACTTGGTTGCAATCCACCGCATTGTTGTTTGTATTGGCATTCCGACTGGGGGAGCTaGACTTGGTTGCAATCCACC +
Preference number: 4 (lower is better)
Translates to: TGGAALGCNPPHCCLYWHSDWGS*TWLQST
Trigger: GGTGGATTGCAACCAAGTGCAGCTCCCCCAGTCGGA...ATGCCAATACAAACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCCCCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR GCA 90 bp GAGGAAGTCTCTGCATACTGTGATGGTACCACGGGCTGCTTCAATTGTAAGGCATCCGACTGGGGGAGCTaGACTTGGTTGCAATCCACC +
Preference number: 4 (lower is better)
Translates to: EEVSAYCDGTTGCFNCKASDWGS*TWLQST
Trigger: GGTGGATTGCAACCAAGTGCAGCTCCCCCAGTCGGA...TGCCTTACAATTGAAGCAGCCCGTGGTACCATCACAGTATGCAGAGACTTCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR GCA 90 bp GCTCATCTCCTTCCATCTCTCCTAATCAAGAGCAAAGGGAACAGCAGGCCTAACCCACACAAGCGAGTGTaGCACGCCCCTCTGGGTTTT +
Preference number: 4 (lower is better)
Translates to: AHLLPSLLIKSKGNSRPNPHKRV*HAPLGF
Trigger: AAAACCCAGAGGGGCGTGGCACACTCGCTTGTGTGG...GTTAGGCCTGCTGTTCCCTTTGCTCTTGATTAGGAGAGATGGAAGGAGATGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR GCA 90 bp GAGGAAGTCTCTGCATACTGTGATGGTACCACGGGCTGCTTCAATTGTAAGGCACCACACAAGCGAGTGTaGCACGCCCCTCTGGGTTTT +
Preference number: 4 (lower is better)
Translates to: EEVSAYCDGTTGCFNCKAPHKRV*HAPLGF
Trigger: AAAACCCAGAGGGGCGTGGCACACTCGCTTGTGTGG...TGCCTTACAATTGAAGCAGCCCGTGGTACCATCACAGTATGCAGAGACTTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp TGGCAACTCCTCCTCTATGGCGAATTCAGGGTGGGTCATGAAGCTGTGGATGGACTTCCGTATGAAGTCTaGCAGCGAGAGGAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: WQLLLYGEFRVGHEAVDGLPYEV*QREEEE
Trigger: CTCTTCCTCCTCTCGCTGCCAGACTTCATACGGAAG...TCCATCCACAGCTTCATGACCCACCCTGAATTCGCCATAGAGGAGGAGTTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR CCA 90 bp GAGTGGTGTTCGTGGCAACTCCTCCTCTATGGCGAATTCAGGGTGGGTCATGAATCACTGAGAAAAGGATaGCTGCCCCCTCAATCCAGC +
Preference number: 4 (lower is better)
Translates to: EWCSWQLLLYGEFRVGHESLRKG*LPPQSS
Trigger: GCTGGATTGAGGGGGCAGCCATCCTTTTCTCAGTGA...TTCATGACCCACCCTGAATTCGCCATAGAGGAGGAGTTGCCACGAACACCACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR CCA 90 bp GCAGGCATTTATAAGTGCCCACCCTCACCAATGCATCGGGGGTGGTCCCTAGATGAACCTTCCATGACATaGGTCCCTGAGAGCAACATG +
Preference number: 4 (lower is better)
Translates to: AGIYKCPPSPMHRGWSLDEPSMT*VPESNM
Trigger: CATGTTGCTCTCAGGGACCCATGTCATGGAAGGTTC...ATCTAGGGACCACCCCCGATGCATTGGTGAGGGTGGGCACTTATAAATGCCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CCA 90 bp ATGGCTTTGAAAGCAGTGGTCACCCCAAAGAGGAGCCCACAAAAGTCTGCTTTGCTCCTGGCTGTTGAGTaGCTGGATTTCCAGGGCCAC +
Preference number: 4 (lower is better)
Translates to: MALKAVVTPKRSPQKSALLLAVE*LDFQGH
Trigger: GTGGCCCTGGAAATCCAGCCACTCAACAGCCAGGAG...CAAAGCAGACTTTTGTGGGCTCCTCTTTGGGGTGACCACTGCTTTCAAAGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CCA 90 bp GGGGAGCTGCACTTGGTTGCAATCCACCGCATTGTTGTTTGTATTGGCATATGGCTCCTGGCTGTTGAGTaGCTGGATTTCCAGGGCCAC +
Preference number: 4 (lower is better)
Translates to: GELHLVAIHRIVVCIGIWLLAVE*LDFQGH
Trigger: GTGGCCCTGGAAATCCAGCCACTCAACAGCCAGGAG...CCATATGCCAATACAAACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR CCA 90 bp AGCTGTCCGACTGGGGGAGCTGCACTTGGTTGCAATCCACCGCATTGTTGTTTGTTGTCGATTCCCTCCTaGCTGTTGAGTGGCTGGATT +
Preference number: 4 (lower is better)
Translates to: SCPTGGAALGCNPPHCCLLSIPS*LLSGWI
Trigger: AATCCAGCCACTCAACAGCCAGGAGGGAATCGACAA...CAAACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCCCCAGTCGGACAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR CCA 90 bp ATCCAGGAGTGGTGTTCGTGGCAACTCCTCCTCTATGGCGAATTCAGGGTGGGTAGTACTGGATGTAGATaGGAGTACACTCAGGGAGCC +
Preference number: 4 (lower is better)
Translates to: IQEWCSWQLLLYGEFRVGSTGCR*EYTQGA
Trigger: GGCTCCCTGAGTGTACTCCCATCTACATCCAGTACT...ACCCACCCTGAATTCGCCATAGAGGAGGAGTTGCCACGAACACCACTCCTGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR CCA 90 bp TGGCAACTCCTCCTCTATGGCGAATTCAGGGTGGGTCATGAAGCTGTGGATGGAGCAACTCCTCCTCTATaGCGAATTCAGGGTGGGTCA +
Preference number: 4 (lower is better)
Translates to: WQLLLYGEFRVGHEAVDGATPPL*RIQGGS
Trigger: TGACCCACCCTGAATTCGCCATAGAGGAGGAGTTGC...TCCATCCACAGCTTCATGACCCACCCTGAATTCGCCATAGAGGAGGAGTTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR CCA 90 bp GCAAAAATTAGAATCAGAAACTGGAGAGAATGTCGAAGCTGGTCCCCAGGCACCTGGATGAGGGTAGGGTaGGGTGACCACCCACCAGTC +
Preference number: 4 (lower is better)
Translates to: AKIRIRNWRECRSWSPGTWMRVG*GDHPPV
Trigger: GACTGGTGGGTGGTCACCCCACCCTACCCTCATCCA...GGTGCCTGGGGACCAGCTTCGACATTCTCTCCAGTTTCTGATTCTAATTTTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CCA 90 bp GGGGAGCTGCACTTGGTTGCAATCCACCGCATTGTTGTTTGTATTGGCATATGGTTACTGGGCAGCAGCTaGAGCATGTGGCTGAAGCGG +
Preference number: 4 (lower is better)
Translates to: GELHLVAIHRIVVCIGIWLLGSS*SMWLKR
Trigger: CCGCTTCAGCCACATGCTCCAGCTGCTGCCCAGTAA...CCATATGCCAATACAAACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367218.7
CDS-3UTR CCA 90 bp GAGCCTTGGCAGATGGCTTTGAAAGCAGTGGTCACCCCAAAGAGGAGCCCACAAGGGAAGGGGATGCTTTaGGCAGTATTCAGGGGAAAA +
Preference number: 4 (lower is better)
Translates to: EPWQMALKAVVTPKRSPQGKGML*AVFRGK
Trigger: TTTTCCCCTGAATACTGCCCAAAGCATCCCCTTCCC...TTGTGGGCTCCTCTTTGGGGTGACCACTGCTTTCAAAGCCATCTGCCAAGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp GAGCTGTCCGACTGGGGGAGCTGCACTTGGTTGCAATCCACCGCATTGTTGTTTGTCAGGGACATGAACTaGCCCCTACACAGAAGTCAA +
Preference number: 4 (lower is better)
Translates to: ELSDWGSCTWLQSTALLFVRDMN*PLHRSQ
Trigger: TTGACTTCTGTGTAGGGGCCAGTTCATGTCCCTGAC...AAACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCCCCAGTCGGACAGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367218.7
ENST00000484746.1
3UTR CAA 72 bp GACTGGGGGAGCTGCACTTGGTTGCAATCCACCGCATaGTTGTTTGTATTGGCGAATTCAGGGTGGGTCATG +
Preference number: 4 (lower is better)
Translates to: DWGSCTWLQSTA*LFVLANSGWVM
Trigger: CATGACCCACCCTGAATTCGCCAATACAAACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCCCCAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484746.1
CDS-3UTR TCA 90 bp CGCATTGTTGTTTGTATTGGCATATGGAGTGACCTCACCATCCAACAGGAGCACAGAGGATGGGGGAACTaGGTGGAAGGTGGACTCCGT +
Preference number: 4 (lower is better)
Translates to: RIVVCIGIWSDLTIQQEHRGWGN*VEGGLR
Trigger: ACGGAGTCCACCTTCCACTCAGTTCCCCCATCCTCT...GTGCTCCTGTTGGATGGTGAGGTCACTCCATATGCCAATACAAACAACAATGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR TCA 90 bp GAGGAAGTCTCTGCATACTGTGATGGTACCACGGGCTGCTTCAATTGTAAGGCAGGTCAGTGCATCCCTTaGACGCAGCTCCATGAGCTT +
Preference number: 4 (lower is better)
Translates to: EEVSAYCDGTTGCFNCKAGQCIP*TQLHEL
Trigger: AAGCTCATGGAGCTGCGTTCAAGGGATGCACTGACC...TGCCTTACAATTGAAGCAGCCCGTGGTACCATCACAGTATGCAGAGACTTCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR TCA 90 bp CCTTGTAAGTCTGTGCTCTTGCCTCTTCATGGTCAGGTAGAGGTTCACTTCACAGGCCAGAACCTTCCATaGCATGGGTCCCTGAGAGCA +
Preference number: 4 (lower is better)
Translates to: PCKSVLLPLHGQVEVHFTGQNLP*HGSLRA
Trigger: TGCTCTCAGGGACCCATGTCATGGAAGGTTCTGGCC...TGTGAAGTGAACCTCTACCTGACCATGAAGAGGCAAGAGCACAGACTTACAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000357681.10
ENST00000367218.7
CDS-3UTR TCA 90 bp GAAGCTGTGGATGGACTTTTGGTTGTAGGGTTTCTGAATGCTTTCGTGGAGGGAGGCCAGAACCTTCCATaGCATGGGTCCCTGAGAGCA +
Preference number: 4 (lower is better)
Translates to: EAVDGLLVVGFLNAFVEGGQNLP*HGSLRA
Trigger: TGCTCTCAGGGACCCATGTCATGGAAGGTTCTGGCC...TCCCTCCACGAAAGCATTCAGAAACCCTACAACCAAAAGTCCATCCACAGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR TCA 90 bp CCTTGTAAGTCTGTGCTCTTGCCTCTTCATGGTCAGGTAGAGGTTCACTTCACATTCCCTCCTGGCTGTTaGGTGGCTGGATTTCCAGGG +
Preference number: 4 (lower is better)
Translates to: PCKSVLLPLHGQVEVHFTFPPGC*VAGFPG
Trigger: CCCTGGAAATCCAGCCACTCAACAGCCAGGAGGGAA...TGTGAAGTGAACCTCTACCTGACCATGAAGAGGCAAGAGCACAGACTTACAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000357681.10
ENST00000367218.7
CDS-3UTR TCA 90 bp AAAGTCTGCTTTGATGGTCTGTCTTGTCCTAGATTTGGCAGCGTCTGGTCCTCACACAGAGTAGGCCAGTaGGATGGTGACAGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: KVCFDGLSCPRFGSVWSSHRVGQ*DGDSQR
Trigger: CCTCTGGCTGTCACCATCTCACTGGCCTACTCTGTG...TGAGGACCAGACGCTGCCAAATCTAGGACAAGACAGACCATCAAAGCAGACTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR TCA 90 bp ACTGGGGGAGCTGCACTTGGTTGCAATCCACCGCATTGTTGTTTGTATTGGCATTACACTTGCGCAAGATaGTCTCAGAGGCGCCCTTGC +
Preference number: 4 (lower is better)
Translates to: TGGAALGCNPPHCCLYWHYTCAR*SQRRPC
Trigger: GCAAGGGCGCCTCTGAGATCATCTTGCGCAAGTGTA...ATGCCAATACAAACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCCCCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR TCA 90 bp TTCTTTATGTTTCCTACTGTGGACAGCTCAGGTGAAAGGGGTGAGGGAGGACAGTACACTTGCGCAAGATaGTCTCAGAGGCGCCCTTGC +
Preference number: 4 (lower is better)
Translates to: FFMFPTVDSSGERGEGGQYTCAR*SQRRPC
Trigger: GCAAGGGCGCCTCTGAGATCATCTTGCGCAAGTGTA...CTGTCCTCCCTCACCCCTTTCACCTGAGCTGTCCACAGTAGGAAACATAAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR TCA 90 bp CTAGCAAAGTCCCCAACTCCTGAGAGGCAGATGGGAAGGGGATGCTTTGGGCAGTGTCATCTGTTAGGATaGTGTCTGAAGCCTCCTTTG +
Preference number: 4 (lower is better)
Translates to: LAKSPTPERQMGRGCFGQCHLLG*CLKPPL
Trigger: CAAAGGAGGCTTCAGACATCATCCTAACAGATGACA...CTGCCCAAAGCATCCCCTTCCCATCTGCCTCTCAGGAGTTGGGGACTTTGCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR TCA 90 bp GGGGAGCTGCACTTGGTTGCAATCCACCGCATTGTTGTTTGTATTGGCATATGGGACCTGAATGGGGTTTaGCTGGGTCCCGCTACAAAC +
Preference number: 4 (lower is better)
Translates to: GELHLVAIHRIVVCIGIWDLNGV*LGPATN
Trigger: GTTTGTAGCGGGACCCAGTCAAACCCCATTCAGGTC...CCATATGCCAATACAAACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR TCA 90 bp ATCCAGGAGTGGTGTTCGTGGCAACTCCTCCTCTATGGCGAATTCAGGGTGGGTCTTCCTGGATACCGATaGCAACTGGATCTCTCTCTT +
Preference number: 4 (lower is better)
Translates to: IQEWCSWQLLLYGEFRVGLPGYR*QLDLSL
Trigger: AAGAGAGAGATCCAGTTGTCATCGGTATCCAGGAAG...ACCCACCCTGAATTCGCCATAGAGGAGGAGTTGCCACGAACACCACTCCTGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367218.7
CDS-3UTR GCA 90 bp GCAGGCATTTATAAGTGCCCACCCTCACCAATGCATCGGGGGTGGTCCCTAGATGTTCGTCATTTTGCCTaGTGTTACCAAGCCCCTCAA +
Preference number: 4 (lower is better)
Translates to: AGIYKCPPSPMHRGWSLDVRHFA*CYQAPQ
Trigger: TTGAGGGGCTTGGTAACAGCAGGCAAAATGACGAAC...ATCTAGGGACCACCCCCGATGCATTGGTGAGGGTGGGCACTTATAAATGCCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR GCA 90 bp GAGCCCACAAAAGTCTGCTTTGATGGTCTGTCTTGTCCTAGATTTGGCAGCGTCTGTTCAATGCGGCACTaGAGCCCCCGGAATTGCTTC +
Preference number: 4 (lower is better)
Translates to: EPTKVCFDGLSCPRFGSVCSMRH*SPRNCF
Trigger: GAAGCAATTCCGGGGGCTGCAGTGCCGCATTGAACA...GACGCTGCCAAATCTAGGACAAGACAGACCATCAAAGCAGACTTTTGTGGGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR GCA 90 bp CCTCCTCTTCCTCATCCAGGAGTGGTGTTCGTGGCAACTCCTCCTCTATGGCGAATGATGGAGAACTTTTaGTCCTGTTCAATGCGGCAC +
Preference number: 4 (lower is better)
Translates to: PPLPHPGVVFVATPPLWRMMENF*SCSMRH
Trigger: GTGCCGCATTGAACAGGAGCAAAAGTTCTCCATCAT...TCGCCATAGAGGAGGAGTTGCCACGAACACCACTCCTGGATGAGGAAGAGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR GCA 90 bp ACTGGGGGAGCTGCACTTGGTTGCAATCCACCGCATTGTTGTTTGTATTGGCATTCTCCTCTTTGGTGGTaGCATGCCCAGCCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: TGGAALGCNPPHCCLYWHSPLWW*HAQPPS
Trigger: TGAAGGAGGCTGGGCATGGCACCACCAAAGAGGAGA...ATGCCAATACAAACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCCCCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR GCA 90 bp TGTCCAGAGGGATTTCTAGGTGATCTCTCTCTTAACCCCTTTAGGGACAGGAGACCACACAAGCGAGTGTaGCACGCCCCTCTGGGTTTT +
Preference number: 4 (lower is better)
Translates to: CPEGFLGDLSLNPFRDRRPHKRV*HAPLGF
Trigger: AAAACCCAGAGGGGCGTGGCACACTCGCTTGTGTGG...TCTCCTGTCCCTAAAGGGGTTAAGAGAGAGATCACCTAGAAATCCCTCTGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR GCA 90 bp ATCCAGGAGTGGTGTTCGTGGCAACTCCTCCTCTATGGCGAATTCAGGGTGGGTGCAGGCATTTATAAGTaGCCACCCTCACCAATGCAT +
Preference number: 4 (lower is better)
Translates to: IQEWCSWQLLLYGEFRVGAGIYK*PPSPMH
Trigger: ATGCATTGGTGAGGGTGGGCACTTATAAATGCCTGC...ACCCACCCTGAATTCGCCATAGAGGAGGAGTTGCCACGAACACCACTCCTGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367218.7
CDS-3UTR CCA 90 bp ATGCAACCTTCATGGGCAAGGCTGATCTCCCTGGCACTTAAGAACCACATACACCCGTGTCACGATGATTaGTGTCCCCAGGTGGTGATG +
Preference number: 4 (lower is better)
Translates to: MQPSWARLISLALKNHIHPCHDD*CPQVVM
Trigger: CATCACCACCTGGGGACACCAATCATCGTGACACGG...GTGTATGTGGTTCTTAAGTGCCAGGGAGATCAGCCTTGCCCATGAAGGTTGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CCA 90 bp ATCCAACAGGAGCACCCTAGTCCCAAACTTAGAAGCCTTGTCAGGATTTTCCTCTCTCGGCCATCGAGTTaGCAGGCAAGACACGGTCTG +
Preference number: 4 (lower is better)
Translates to: IQQEHPSPKLRSLVRIFLSRPSS*QARHGL
Trigger: CAGACCGTGTCTTGCCTGCCAACTCGATGGCCGAGA...GAGGAAAATCCTGACAAGGCTTCTAAGTTTGGGACTAGGGTGCTCCTGTTGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR CCA 90 bp GTGATCTCTCTCTTAACCCCTTTAGGGACAGGAGAGTCATTCCAGAGGACAGATTCTCGGCCATCGAGTTaGCAGGCAAGACACGGTCTG +
Preference number: 4 (lower is better)
Translates to: VISLLTPLGTGESFQRTDSRPSS*QARHGL
Trigger: CAGACCGTGTCTTGCCTGCCAACTCGATGGCCGAGA...ATCTGTCCTCTGGAATGACTCTCCTGTCCCTAAAGGGGTTAAGAGAGAGATCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CCA 90 bp TGGGGGAGCTGCACTTGGTTGCAATCCACCGCATTGTTGTTTGTATTGGCATATTGGCTGTTGAGTGGCTaGATTTCCAGGGCCACTCCG +
Preference number: 4 (lower is better)
Translates to: WGSCTWLQSTALLFVLAYWLLSG*ISRATP
Trigger: CGGAGTGGCCCTGGAAATCCAGCCACTCAACAGCCA...ATATGCCAATACAAACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR CCA 90 bp GCAAAAATTAGAATCAGAAACTGGAGAGAATGTCGAAGCTGGTCCCCAGGCACCTGGCTGTTGAGTGGCTaGATTTCCAGGGCCACTCCG +
Preference number: 4 (lower is better)
Translates to: AKIRIRNWRECRSWSPGTWLLSG*ISRATP
Trigger: CGGAGTGGCCCTGGAAATCCAGCCACTCAACAGCCA...GGTGCCTGGGGACCAGCTTCGACATTCTCTCCAGTTTCTGATTCTAATTTTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CCA 90 bp TTCCTCATCCAGGAGTGGTGTTCGTGGCAACTCCTCCTCTATGGCGAATTCAGGAGTACTGGATGTAGATaGGAGTACACTCAGGGAGCC +
Preference number: 4 (lower is better)
Translates to: FLIQEWCSWQLLLYGEFRSTGCR*EYTQGA
Trigger: GGCTCCCTGAGTGTACTCCCATCTACATCCAGTACT...CCTGAATTCGCCATAGAGGAGGAGTTGCCACGAACACCACTCCTGGATGAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR CCA 90 bp TCTCCCAAGGCTTCTGAACACTCATTCCCCACCAGTCAGGTCCTGCCCTGGAGAGAAGACATCAGGGCTTaGGATTTGACGGTAATGGAT +
Preference number: 4 (lower is better)
Translates to: SPKASEHSFPTSQVLPWREDIRA*DLTVMD
Trigger: ATCCATTACCGTCAAATCCCAAGCCCTGATGTCTTC...TCTCCAGGGCAGGACCTGACTGGTGGGGAATGAGTGTTCAGAAGCCTTGGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CCA 90 bp ATGCAACCTTCATGGGCAAGGCTGATCTCCCTGGCACTTAAGAACCACATACACTTTGGCAATAGCATCTaGCACCTCTGGGCGCACAGG +
Preference number: 4 (lower is better)
Translates to: MQPSWARLISLALKNHIHFGNSI*HLWAHR
Trigger: CCTGTGCGCCCAGAGGTGCCAGATGCTATTGCCAAA...GTGTATGTGGTTCTTAAGTGCCAGGGAGATCAGCCTTGCCCATGAAGGTTGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CCA 90 bp GCTCATCTCCTTCCATCTCTCCTAATCAAGAGCAAAGGGAACAGCAGGCCTAACTTTGGCAATAGCATCTaGCACCTCTGGGCGCACAGG +
Preference number: 4 (lower is better)
Translates to: AHLLPSLLIKSKGNSRPNFGNSI*HLWAHR
Trigger: CCTGTGCGCCCAGAGGTGCCAGATGCTATTGCCAAA...GTTAGGCCTGCTGTTCCCTTTGCTCTTGATTAGGAGAGATGGAAGGAGATGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CCA 90 bp AATCTCCTAGCAAAGTCCCCAACTCCTGAGAGGCAGATGGGAAGGGGATGCTTTGCAACTCCTCCTCTATaGCGAATTCAGGGTGGGTCA +
Preference number: 4 (lower is better)
Translates to: NLLAKSPTPERQMGRGCFATPPL*RIQGGS
Trigger: TGACCCACCCTGAATTCGCCATAGAGGAGGAGTTGC...AAAGCATCCCCTTCCCATCTGCCTCTCAGGAGTTGGGGACTTTGCTAGGAGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CCA 90 bp TCTTTATGTTTCCTACTGTGGACAGCTCAGGTGAAAGGGGTGAGGGAGGACAGACAGGAGTGGTGTTCGTaGCAACTCCTCCTCTATGGC +
Preference number: 4 (lower is better)
Translates to: SLCFLLWTAQVKGVREDRQEWCS*QLLLYG
Trigger: GCCATAGAGGAGGAGTTGCCACGAACACCACTCCTG...TCTGTCCTCCCTCACCCCTTTCACCTGAGCTGTCCACAGTAGGAAACATAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CCA 90 bp GAGCCCACAAAAGTCTGCTTTGATGGTCTGTCTTGTCCTAGATTTGGCAGCGTCCAGGAGTGGTGTTCGTaGCAACTCCTCCTCTATGGC +
Preference number: 4 (lower is better)
Translates to: EPTKVCFDGLSCPRFGSVQEWCS*QLLLYG
Trigger: GCCATAGAGGAGGAGTTGCCACGAACACCACTCCTG...GACGCTGCCAAATCTAGGACAAGACAGACCATCAAAGCAGACTTTTGTGGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CCA 90 bp TGTCCAGAGGGATTTCTAGGTGATCTCTCTCTTAACCCCTTTAGGGACAGGAGACTCTCTTCGGAGGGATaGTGCCCCACGAAGTTCGTG +
Preference number: 4 (lower is better)
Translates to: CPEGFLGDLSLNPFRDRRLSSEG*CPTKFV
Trigger: CACGAACTTCGTGGGGCACCATCCCTCCGAAGAGAG...TCTCCTGTCCCTAAAGGGGTTAAGAGAGAGATCACCTAGAAATCCCTCTGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CCA 90 bp CCTCTCCCAAGGCTTCTGAACACTCATTCCCCACCAGTCAGGTCCTGCCCTGGAGATACCGATGACAACTaGATCTCTCTCTTTCTAGCA +
Preference number: 4 (lower is better)
Translates to: PLPRLLNTHSPPVRSCPGDTDDN*ISLFLA
Trigger: TGCTAGAAAGAGAGAGATCCAGTTGTCATCGGTATC...TCCAGGGCAGGACCTGACTGGTGGGGAATGAGTGTTCAGAAGCCTTGGGAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CCA 90 bp CCTGAATGGGGTTTGACTGGGTCCCGCTACAAACCCCAAGTCAAGCTTAAGTTGGCTAGAATGGCTCTTTaGCCTCTCCCAAGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: PEWGLTGSRYKPQVKLKLARMAL*PLPRLL
Trigger: CAGAAGCCTTGGGAGAGGCCAAAGAGCCATTCTAGC...CAACTTAAGCTTGACTTGGGGTTTGTAGCGGGACCCAGTCAAACCCCATTCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp CCTTGTAAGTCTGTGCTCTTGCCTCTTCATGGTCAGGTAGAGGTTCACTTCACAGGCACAGGGCTTTACTaGGCAGCAGCTGGAGCATGT +
Preference number: 4 (lower is better)
Translates to: PCKSVLLPLHGQVEVHFTGTGLY*AAAGAC
Trigger: ACATGCTCCAGCTGCTGCCCAGTAAAGCCCTGTGCC...TGTGAAGTGAACCTCTACCTGACCATGAAGAGGCAAGAGCACAGACTTACAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp TCTTTATGTTTCCTACTGTGGACAGCTCAGGTGAAAGGGGTGAGGGAGGACAGAGAGCTCCTGCAAACGTaGCTCCACGTTGTCCCAGTA +
Preference number: 4 (lower is better)
Translates to: SLCFLLWTAQVKGVREDRELLQT*LHVVPV
Trigger: TACTGGGACAACGTGGAGCCACGTTTGCAGGAGCTC...TCTGTCCTCCCTCACCCCTTTCACCTGAGCTGTCCACAGTAGGAAACATAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp GAGGAAGTCTCTGCATACTGTGATGGTACCACGGGCTGCTTCAATTGTAAGGCATGTGCCACGCCCCTCTaGGTTTTCAGCAGTGAGGTA +
Preference number: 4 (lower is better)
Translates to: EEVSAYCDGTTGCFNCKACATPL*VFSSEV
Trigger: TACCTCACTGCTGAAAACCCAGAGGGGCGTGGCACA...TGCCTTACAATTGAAGCAGCCCGTGGTACCATCACAGTATGCAGAGACTTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR TCA 90 bp TTCCTCATCCAGGAGTGGTGTTCGTGGCAACTCCTCCTCTATGGCGAATTCAGGACCAACTTGCCCAGATaGAGGTGTAAACAGGATGTG +
Preference number: 4 (lower is better)
Translates to: FLIQEWCSWQLLLYGEFRTNLPR*RCKQDV
Trigger: CACATCCTGTTTACACCTTCATCTGGGCAAGTTGGT...CCTGAATTCGCCATAGAGGAGGAGTTGCCACGAACACCACTCCTGGATGAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR TCA 90 bp TGGCAACTCCTCCTCTATGGCGAATTCAGGGTGGGTCATGAAGCTGTGGATGGAACCAACTTGCCCAGATaGAGGTGTAAACAGGATGTG +
Preference number: 4 (lower is better)
Translates to: WQLLLYGEFRVGHEAVDGTNLPR*RCKQDV
Trigger: CACATCCTGTTTACACCTTCATCTGGGCAAGTTGGT...TCCATCCACAGCTTCATGACCCACCCTGAATTCGCCATAGAGGAGGAGTTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR TCA 90 bp ATCCACCGCATTGTTGTTTGTATTGGCATATGGAGTGACCTCACCATCCAACAGAGAGGATGGGGGAACTaGGTGGAAGGTGGACTCCGT +
Preference number: 4 (lower is better)
Translates to: IHRIVVCIGIWSDLTIQQRGWGN*VEGGLR
Trigger: ACGGAGTCCACCTTCCACTCAGTTCCCCCATCCTCT...CTGTTGGATGGTGAGGTCACTCCATATGCCAATACAAACAACAATGCGGTGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR TCA 90 bp ATCCAACAGGAGCACCCTAGTCCCAAACTTAGAAGCCTTGTCAGGATTTTCCTCGGTCAGTGCATCCCTTaGACGCAGCTCCATGAGCTT +
Preference number: 4 (lower is better)
Translates to: IQQEHPSPKLRSLVRIFLGQCIP*TQLHEL
Trigger: AAGCTCATGGAGCTGCGTTCAAGGGATGCACTGACC...GAGGAAAATCCTGACAAGGCTTCTAAGTTTGGGACTAGGGTGCTCCTGTTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR TCA 90 bp TGGCAACTCCTCCTCTATGGCGAATTCAGGGTGGGTCATGAAGCTGTGGATGGAGTTGACCGTTTCGGATaGTGGAGAACTTTTGCTCCT +
Preference number: 4 (lower is better)
Translates to: WQLLLYGEFRVGHEAVDGVDRFG*WRTFAP
Trigger: AGGAGCAAAAGTTCTCCATCATCCGAAACGGTCAAC...TCCATCCACAGCTTCATGACCCACCCTGAATTCGCCATAGAGGAGGAGTTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR TCA 90 bp AAATGGCACAGACTTGTAGGACAAAATCCAGAATTCAGGAGAGGAACATCGGGGCACAGAGTAGGCCAGTaGGATGGTGACAGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: KWHRLVGQNPEFRRGTSGHRVGQ*DGDSQR
Trigger: CCTCTGGCTGTCACCATCTCACTGGCCTACTCTGTG...CCCCGATGTTCCTCTCCTGAATTCTGGATTTTGTCCTACAAGTCTGTGCCATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000357681.10
ENST00000367218.7
CDS-3UTR TCA 90 bp GGGGAGCTGCACTTGGTTGCAATCCACCGCATTGTTGTTTGTATTGGCATATGGAGGCCATGGGCTCGATaGCAGTGCGTACCATATCAT +
Preference number: 4 (lower is better)
Translates to: GELHLVAIHRIVVCIGIWRPWAR*QCVPYH
Trigger: ATGATATGGTACGCACTGTCATCGAGCCCATGGCCT...CCATATGCCAATACAAACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR TCA 90 bp CACAGACTTGTAGGACAAAATCCAGAATTCAGGAGAGGAACATCGGGGAGAATGCCTCGGCATCCTTGGTaGTCTCCTCTTTGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: HRLVGQNPEFRRGTSGRMPRHPW*SPLWWC
Trigger: GCACCACCAAAGAGGAGATCACCAAGGATGCCGAGG...CATTCTCCCCGATGTTCCTCTCCTGAATTCTGGATTTTGTCCTACAAGTCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000357681.10
ENST00000367218.7
CDS-3UTR TCA 90 bp TGGCAACTCCTCCTCTATGGCGAATTCAGGGTGGGTCATGAAGCTGTGGATGGATATTGGCATATGGAGTaGCCTCACCATCCAACAGGA +
Preference number: 4 (lower is better)
Translates to: WQLLLYGEFRVGHEAVDGYWHME*PHHPTG
Trigger: TCCTGTTGGATGGTGAGGTCACTCCATATGCCAATA...TCCATCCACAGCTTCATGACCCACCCTGAATTCGCCATAGAGGAGGAGTTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR TCA 90 bp ATCCAACAGGAGCACCCTAGTCCCAAACTTAGAAGCCTTGTCAGGATTTTCCTCGACCTGAATGGGGTTTaGCTGGGTCCCGCTACAAAC +
Preference number: 4 (lower is better)
Translates to: IQQEHPSPKLRSLVRIFLDLNGV*LGPATN
Trigger: GTTTGTAGCGGGACCCAGTCAAACCCCATTCAGGTC...GAGGAAAATCCTGACAAGGCTTCTAAGTTTGGGACTAGGGTGCTCCTGTTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR TCA 90 bp TTCTCAGATCATGCTAGAATGGCTCTTTGGCCTCTCCCAAGGCTTCTGAACACTGACCTGAATGGGGTTTaGCTGGGTCCCGCTACAAAC +
Preference number: 4 (lower is better)
Translates to: FSDHARMALWPLPRLLNTDLNGV*LGPATN
Trigger: GTTTGTAGCGGGACCCAGTCAAACCCCATTCAGGTC...AGTGTTCAGAAGCCTTGGGAGAGGCCAAAGAGCCATTCTAGCATGATCTGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR TCA 90 bp ACCCCAAAGAGGAGCCCACAAAAGTCTGCTTTGATGGTCTGTCTTGTCCTAGATGACCTGAATGGGGTTTaGCTGGGTCCCGCTACAAAC +
Preference number: 4 (lower is better)
Translates to: TPKRSPQKSALMVCLVLDDLNGV*LGPATN
Trigger: GTTTGTAGCGGGACCCAGTCAAACCCCATTCAGGTC...ATCTAGGACAAGACAGACCATCAAAGCAGACTTTTGTGGGCTCCTCTTTGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR TCA 90 bp CCTGAATGGGGTTTGACTGGGTCCCGCTACAAACCCCAAGTCAAGCTTAAGTTGGATTCTACCATGACCTaGATGGGGTTTGACTGGGTC +
Preference number: 4 (lower is better)
Translates to: PEWGLTGSRYKPQVKLKLDSTMT*MGFDWV
Trigger: GACCCAGTCAAACCCCATTCAGGTCATGGTAGAATC...CAACTTAAGCTTGACTTGGGGTTTGTAGCGGGACCCAGTCAAACCCCATTCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341360.6
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR TCA 90 bp GAGGAAGTCTCTGCATACTGTGATGGTACCACGGGCTGCTTCAATTGTAAGGCACTTGGCAGATGGCTTTaGAAGCAGTGGTCACCCCAA +
Preference number: 4 (lower is better)
Translates to: EEVSAYCDGTTGCFNCKALGRWL*KQWSPQ
Trigger: TTGGGGTGACCACTGCTTTCAAAGCCATCTGCCAAG...TGCCTTACAATTGAAGCAGCCCGTGGTACCATCACAGTATGCAGAGACTTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR TCA 90 bp CCTCTCCCAAGGCTTCTGAACACTCATTCCCCACCAGTCAGGTCCTGCCCTGGAAGACTGGAAAAGTTGTaGCACGTGGCAAAAATTAGA +
Preference number: 4 (lower is better)
Translates to: PLPRLLNTHSPPVRSCPGRLEKL*HVAKIR
Trigger: TCTAATTTTTGCCACGTGTCACAACTTTTCCAGTCT...TCCAGGGCAGGACCTGACTGGTGGGGAATGAGTGTTCAGAAGCCTTGGGAGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR TCA 90 bp GCTCATCTCCTTCCATCTCTCCTAATCAAGAGCAAAGGGAACAGCAGGCCTAACGAGAGGAAGCTAGGATaGTACGTTCTCCTTCTCCCC +
Preference number: 4 (lower is better)
Translates to: AHLLPSLLIKSKGNSRPNERKLG*YVLLLP
Trigger: GGGGAGAAGGAGAACGTATCATCCTAGCTTCCTCTC...GTTAGGCCTGCTGTTCCCTTTGCTCTTGATTAGGAGAGATGGAAGGAGATGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR TCA 90 bp TTCTTTATGTTTCCTACTGTGGACAGCTCAGGTGAAAGGGGTGAGGGAGGACAGAGTCTCTGCATACTGTaGTGGTACCACGGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: FFMFPTVDSSGERGEGGQSLCIL*WYHGLL
Trigger: AAGCAGCCCGTGGTACCATCACAGTATGCAGAGACT...CTGTCCTCCCTCACCCCTTTCACCTGAGCTGTCCACAGTAGGAAACATAAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR GCA 90 bp ACTGGGGGAGCTGCACTTGGTTGCAATCCACCGCATTGTTGTTTGTATTGGCATACGTTTCTCCAGATCTaGAGGGTTCCCAGACAGACC +
Preference number: 4 (lower is better)
Translates to: TGGAALGCNPPHCCLYWHTFLQI*RVPRQT
Trigger: GGTCTGTCTGGGAACCCTGCAGATCTGGAGAAACGT...ATGCCAATACAAACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCCCCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR GCA 90 bp GAGCTGTCCGACTGGGGGAGCTGCACTTGGTTGCAATCCACCGCATTGTTGTTTTTGTGTCCAAACACCTaGCTACGTTTCTCCAGATCT +
Preference number: 4 (lower is better)
Translates to: ELSDWGSCTWLQSTALLFLCPNT*LRFSRS
Trigger: AGATCTGGAGAAACGTAGGCAGGTGTTTGGACACAA...AAACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCCCCAGTCGGACAGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR GCA 90 bp GGCTGGAATGGCTTAACAATAGCAGGCATTTATAAGTGCCCACCCTCACCAATGTGTTCAATGCGGCACTaGAGCCCCCGGAATTGCTTC +
Preference number: 4 (lower is better)
Translates to: GWNGLTIAGIYKCPPSPMCSMRH*SPRNCF
Trigger: GAAGCAATTCCGGGGGCTGCAGTGCCGCATTGAACA...CATTGGTGAGGGTGGGCACTTATAAATGCCTGCTATTGTTAAGCCATTCCAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR GCA 90 bp ACCCCAAAGAGGAGCCCACAAAAGTCTGCTTTGATGGTCTGTCTTGTCCTAGATTCTCAGAGGCGCCCTTaGTGTACATACGGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: TPKRSPQKSALMVCLVLDSQRRP*CTYGSH
Trigger: GTGGCTTCCGTATGTACAGCAAGGGCGCCTCTGAGA...ATCTAGGACAAGACAGACCATCAAAGCAGACTTTTGTGGGCTCCTCTTTGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR GCA 90 bp GGGGAGCTGCACTTGGTTGCAATCCACCGCATTGTTGTTTGTATTGGCATATGGCCTTTGCTACATCTGTaGCTGCGATGCCCATGGCAA +
Preference number: 4 (lower is better)
Translates to: GELHLVAIHRIVVCIGIWPLLHL*LRCPWQ
Trigger: TTGCCATGGGCATCGCAGGCACAGATGTAGCAAAGG...CCATATGCCAATACAAACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR GCA 90 bp CCTTGTAAGTCTGTGCTCTTGCCTCTTCATGGTCAGGTAGAGGTTCACTTCACAGGATCGGGTAGGTATTaGGGAGATGAACTGGCCCCA +
Preference number: 4 (lower is better)
Translates to: PCKSVLLPLHGQVEVHFTGSGRY*GDELAP
Trigger: TGGGGCCAGTTCATCTCCGCAATACCTACCCGATCC...TGTGAAGTGAACCTCTACCTGACCATGAAGAGGCAAGAGCACAGACTTACAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000357681.10
ENST00000367218.7
CDS-3UTR GCA 90 bp AAAGTCTGCTTTGATGGTCTGTCTTGTCCTAGATTTGGCAGCGTCTGGTCCTCATCTTTGGTGGTGCCATaGCCAGCCTCCTTCAGGAAC +
Preference number: 4 (lower is better)
Translates to: KVCFDGLSCPRFGSVWSSSLVVP*PASFRN
Trigger: GTTCCTGAAGGAGGCTGGGCATGGCACCACCAAAGA...TGAGGACCAGACGCTGCCAAATCTAGGACAAGACAGACCATCAAAGCAGACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR GCA 90 bp AATCTCCTAGCAAAGTCCCCAACTCCTGAGAGGCAGATGGGAAGGGGATGCTTTGGAGCTGCACTTGGTTaGAATCCACCGCATTGTTGT +
Preference number: 4 (lower is better)
Translates to: NLLAKSPTPERQMGRGCFGAALG*NPPHCC
Trigger: ACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCC...AAAGCATCCCCTTCCCATCTGCCTCTCAGGAGTTGGGGACTTTGCTAGGAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR GCA 90 bp AAATGGCACAGACTTGTAGGACAAAATCCAGAATTCAGGAGAGGAACATCGGGGTCCGACTGGGGGAGCTaGACTTGGTTGCAATCCACC +
Preference number: 4 (lower is better)
Translates to: KWHRLVGQNPEFRRGTSGSDWGS*TWLQST
Trigger: GGTGGATTGCAACCAAGTGCAGCTCCCCCAGTCGGA...CCCCGATGTTCCTCTCCTGAATTCTGGATTTTGTCCTACAAGTCTGTGCCATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000341360.6
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp ACCCCAAAGAGGAGCCCACAAAAGTCTGCTTTGATGGTCTGTCTTGTCCTAGATGATGGGGGAACTGAGTaGAAGGTGGACTCCGTGTCA +
Preference number: 4 (lower is better)
Translates to: TPKRSPQKSALMVCLVLDDGGTE*KVDSVS
Trigger: TGACACGGAGTCCACCTTCCACTCAGTTCCCCCATC...ATCTAGGACAAGACAGACCATCAAAGCAGACTTTTGTGGGCTCCTCTTTGGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CCA 90 bp TTCTTTATGTTTCCTACTGTGGACAGCTCAGGTGAAAGGGGTGAGGGAGGACAGCTTCCGTATGAAGTCTaGCAGCGAGAGGAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: FFMFPTVDSSGERGEGGQLPYEV*QREEEE
Trigger: CTCTTCCTCCTCTCGCTGCCAGACTTCATACGGAAG...CTGTCCTCCCTCACCCCTTTCACCTGAGCTGTCCACAGTAGGAAACATAAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CCA 90 bp GAGCTGTCCGACTGGGGGAGCTGCACTTGGTTGCAATCCACCGCATTGTTGTTTCTCATTTTCATCTTCTaGGGTAGTTGCGACTTGACC +
Preference number: 4 (lower is better)
Translates to: ELSDWGSCTWLQSTALLFLIFIF*GSCDLT
Trigger: GGTCAAGTCGCAACTACCCCAGAAGATGAAAATGAG...AAACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCCCCAGTCGGACAGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR CCA 90 bp GAGCCTTGGCAGATGGCTTTGAAAGCAGTGGTCACCCCAAAGAGGAGCCCACAACTCATTTTCATCTTCTaGGGTAGTTGCGACTTGACC +
Preference number: 4 (lower is better)
Translates to: EPWQMALKAVVTPKRSPQLIFIF*GSCDLT
Trigger: GGTCAAGTCGCAACTACCCCAGAAGATGAAAATGAG...TTGTGGGCTCCTCTTTGGGGTGACCACTGCTTTCAAAGCCATCTGCCAAGGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CCA 90 bp ACTGGGGGAGCTGCACTTGGTTGCAATCCACCGCATTGTTGTTTGTATTGGCATTCACTGAGAAAAGGATaGCTGCCCCCTCAATCCAGC +
Preference number: 4 (lower is better)
Translates to: TGGAALGCNPPHCCLYWHSLRKG*LPPQSS
Trigger: GCTGGATTGAGGGGGCAGCCATCCTTTTCTCAGTGA...ATGCCAATACAAACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCCCCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR CCA 90 bp TACCACTCTGCCAGCTATTCTTCAAGAAACACAAATCCAACAGAGGCCCCTGATTGGCTGTTGAGTGGCTaGATTTCCAGGGCCACTCCG +
Preference number: 4 (lower is better)
Translates to: YHSASYSSRNTNPTEAPDWLLSG*ISRATP
Trigger: CGGAGTGGCCCTGGAAATCCAGCCACTCAACAGCCA...ATCAGGGGCCTCTGTTGGATTTGTGTTTCTTGAAGAATAGCTGGCAGAGTGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CCA 90 bp TGTCCAGAGGGATTTCTAGGTGATCTCTCTCTTAACCCCTTTAGGGACAGGAGAGCCTCCCTCCTTCTCTaGAGGCAGAATCTTGGAGGT +
Preference number: 4 (lower is better)
Translates to: CPEGFLGDLSLNPFRDRRASLLL*RQNLGG
Trigger: ACCTCCAAGATTCTGCCTCCAGAGAAGGAGGGAGGC...TCTCCTGTCCCTAAAGGGGTTAAGAGAGAGATCACCTAGAAATCCCTCTGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CCA 90 bp CCTCCTCTTCCTCATCCAGGAGTGGTGTTCGTGGCAACTCCTCCTCTATGGCGAACGTTCTTCTCTCCATaGATCTTTCGGGAGTTGATT +
Preference number: 4 (lower is better)
Translates to: PPLPHPGVVFVATPPLWRTFFSP*IFRELI
Trigger: AATCAACTCCCGAAAGATCCATGGAGAGAAGAACGT...TCGCCATAGAGGAGGAGTTGCCACGAACACCACTCCTGGATGAGGAAGAGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR CCA 90 bp GAAACTGGAGAGAATGTCGAAGCTGGTCCCCAGGCACCTAAGCTCAAGGTTTCTAGCTCCATCTCAGCATaGTCAATCTCATCCAGTCCC +
Preference number: 4 (lower is better)
Translates to: ETGENVEAGPQAPKLKVSSSISA*SISSSP
Trigger: GGGACTGGATGAGATTGACCATGCTGAGATGGAGCT...AGAAACCTTGAGCTTAGGTGCCTGGGGACCAGCTTCGACATTCTCTCCAGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp AATCTCCTAGCAAAGTCCCCAACTCCTGAGAGGCAGATGGGAAGGGGATGCTTTAGCTCCATCTCAGCATaGTCAATCTCATCCAGTCCC +
Preference number: 4 (lower is better)
Translates to: NLLAKSPTPERQMGRGCFSSISA*SISSSP
Trigger: GGGACTGGATGAGATTGACCATGCTGAGATGGAGCT...AAAGCATCCCCTTCCCATCTGCCTCTCAGGAGTTGGGGACTTTGCTAGGAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp TTCCTCATCCAGGAGTGGTGTTCGTGGCAACTCCTCCTCTATGGCGAATTCAGGGGGGGAAGATTTGACTaGTGCAACTGCTACATAGGA +
Preference number: 4 (lower is better)
Translates to: FLIQEWCSWQLLLYGEFRGGRFD*CNCYIG
Trigger: TCCTATGTAGCAGTTGCACCAGTCAAATCTTCCCCC...CCTGAATTCGCCATAGAGGAGGAGTTGCCACGAACACCACTCCTGGATGAGGAA
51% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR CCA 90 bp ACTGGGGGAGCTGCACTTGGTTGCAATCCACCGCATTGTTGTTTGTATTGGCATTTCCTCATCCAGGAGTaGTGTTCGTGGCAACTCCTC +
Preference number: 4 (lower is better)
Translates to: TGGAALGCNPPHCCLYWHFLIQE*CSWQLL
Trigger: GAGGAGTTGCCACGAACACCACTCCTGGATGAGGAA...ATGCCAATACAAACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCCCCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR CCA 90 bp GAAGCTGTGGATGGACTTTTGGTTGTAGGGTTTCTGAATGCTTTCGTGGAGGGATGGGGGAGCTGCACTTaGTTGCAATCCACCGCATTG +
Preference number: 4 (lower is better)
Translates to: EAVDGLLVVGFLNAFVEGWGSCT*LQSTAL
Trigger: CAATGCGGTGGATTGCAACCAAGTGCAGCTCCCCCA...TCCCTCCACGAAAGCATTCAGAAACCCTACAACCAAAAGTCCATCCACAGCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp GGCTGGAATGGCTTAACAATAGCAGGCATTTATAAGTGCCCACCCTCACCAATGTGGGGGAGCTGCACTTaGTTGCAATCCACCGCATTG +
Preference number: 4 (lower is better)
Translates to: GWNGLTIAGIYKCPPSPMWGSCT*LQSTAL
Trigger: CAATGCGGTGGATTGCAACCAAGTGCAGCTCCCCCA...CATTGGTGAGGGTGGGCACTTATAAATGCCTGCTATTGTTAAGCCATTCCAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp GTGATCTCTCTCTTAACCCCTTTAGGGACAGGAGAGTCATTCCAGAGGACAGATTGGGGGAGCTGCACTTaGTTGCAATCCACCGCATTG +
Preference number: 4 (lower is better)
Translates to: VISLLTPLGTGESFQRTDWGSCT*LQSTAL
Trigger: CAATGCGGTGGATTGCAACCAAGTGCAGCTCCCCCA...ATCTGTCCTCTGGAATGACTCTCCTGTCCCTAAAGGGGTTAAGAGAGAGATCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp ACCCCAAAGAGGAGCCCACAAAAGTCTGCTTTGATGGTCTGTCTTGTCCTAGATTGGGGGAGCTGCACTTaGTTGCAATCCACCGCATTG +
Preference number: 4 (lower is better)
Translates to: TPKRSPQKSALMVCLVLDWGSCT*LQSTAL
Trigger: CAATGCGGTGGATTGCAACCAAGTGCAGCTCCCCCA...ATCTAGGACAAGACAGACCATCAAAGCAGACTTTTGTGGGCTCCTCTTTGGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp TTGTTGTTTGTATTGGCATATGGAGTGACCTCACCATCCAACAGGAGCACCCTACTCTCTTCGGAGGGATaGTGCCCCACGAAGTTCGTG +
Preference number: 4 (lower is better)
Translates to: LLFVLAYGVTSPSNRSTLLSSEG*CPTKFV
Trigger: CACGAACTTCGTGGGGCACCATCCCTCCGAAGAGAG...TAGGGTGCTCCTGTTGGATGGTGAGGTCACTCCATATGCCAATACAAACAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367218.7
CDS-3UTR CCA 90 bp AGAAAGCTCAGGCTTTCAGGTAAAAACTGTATACCACACATATGCAACCTTCATGCTAAGGCCGGGGAGTaGGCTGGGTCTCCTCCCCCT +
Preference number: 4 (lower is better)
Translates to: RKLRLSGKNCIPHICNLHAKAGE*AGSPPP
Trigger: AGGGGGAGGAGACCCAGCCCACTCCCCGGCCTTAGC...ATGAAGGTTGCATATGTGTGGTATACAGTTTTTACCTGAAAGCCTGAGCTTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CCA 90 bp CCAAATCAGAGTATCCTTATAGACCAGGAGATATTCGTGTCTTTTATACCACTCGCTAAGGCCGGGGAGTaGGCTGGGTCTCCTCCCCCT +
Preference number: 4 (lower is better)
Translates to: PNQSILIDQEIFVSFIPLAKAGE*AGSPPP
Trigger: AGGGGGAGGAGACCCAGCCCACTCCCCGGCCTTAGC...GAGTGGTATAAAAGACACGAATATCTCCTGGTCTATAAGGATACTCTGATTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CCA 90 bp TTCCTCATCCAGGAGTGGTGTTCGTGGCAACTCCTCCTCTATGGCGAATTCAGGAAGAGGAGAGCTTCCTaGATACCGATGACAACTGGA +
Preference number: 4 (lower is better)
Translates to: FLIQEWCSWQLLLYGEFRKRRAS*IPMTTG
Trigger: TCCAGTTGTCATCGGTATCCAGGAAGCTCTCCTCTT...CCTGAATTCGCCATAGAGGAGGAGTTGCCACGAACACCACTCCTGGATGAGGAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367218.7
CDS-3UTR CCA 90 bp AATCTCCTAGCAAAGTCCCCAACTCCTGAGAGGCAGATGGGAAGGGGATGCTTTCATATGCAACCTTCATaGGCAAGGCTGATCTCCCTG +
Preference number: 4 (lower is better)
Translates to: NLLAKSPTPERQMGRGCFHMQPS*ARLISL
Trigger: CAGGGAGATCAGCCTTGCCCATGAAGGTTGCATATG...AAAGCATCCCCTTCCCATCTGCCTCTCAGGAGTTGGGGACTTTGCTAGGAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp GCTCATCTCCTTCCATCTCTCCTAATCAAGAGCAAAGGGAACAGCAGGCCTAACTGCCCTGGAGAGCCTTaGCAGATGGCTTTGAAAGCA +
Preference number: 4 (lower is better)
Translates to: AHLLPSLLIKSKGNSRPNCPGEP*QMALKA
Trigger: TGCTTTCAAAGCCATCTGCCAAGGCTCTCCAGGGCA...GTTAGGCCTGCTGTTCCCTTTGCTCTTGATTAGGAGAGATGGAAGGAGATGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp ATGCAACCTTCATGGGCAAGGCTGATCTCCCTGGCACTTAAGAACCACATACACCAGCAGGGATACAAATaGAGCTCCTGCAAACGTGGC +
Preference number: 4 (lower is better)
Translates to: MQPSWARLISLALKNHIHQQGYK*SSCKRG
Trigger: GCCACGTTTGCAGGAGCTCCATTTGTATCCCTGCTG...GTGTATGTGGTTCTTAAGTGCCAGGGAGATCAGCCTTGCCCATGAAGGTTGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp CCTCCTCTTCCTCATCCAGGAGTGGTGTTCGTGGCAACTCCTCCTCTATGGCGACTGAATTGCAAATTATaGCAACACACACTGGACTGG +
Preference number: 4 (lower is better)
Translates to: PPLPHPGVVFVATPPLWRLNCKL*QHTLDW
Trigger: CCAGTCCAGTGTGTGTTGCCATAATTTGCAATTCAG...TCGCCATAGAGGAGGAGTTGCCACGAACACCACTCCTGGATGAGGAAGAGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367218.7
3UTR CAA 72 bp TGGGGGAGCTGCACTTGGTTGCAATCCACCGCATTGTaGTTTGTATTGGCATATGGAGTGACCTCACCATCC +
Preference number: 4 (lower is better)
Translates to: WGSCTWLQSTAL*FVLAYGVTSPS
Trigger: GGATGGTGAGGTCACTCCATATGCCAATACAAACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
3UTR CAA 72 bp GACTGGGGGAGCTGCACTTGGTTGCAATCCACCGCATaGTTGTTTGTATTGGCATATGGAGTGACCTCACCA +
Preference number: 4 (lower is better)
Translates to: DWGSCTWLQSTA*LFVLAYGVTSP
Trigger: TGGTGAGGTCACTCCATATGCCAATACAAACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCCCCAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR TCA 90 bp GCTCATCTCCTTCCATCTCTCCTAATCAAGAGCAAAGGGAACAGCAGGCCTAACATCCTTTCTTCCGTATaGAGTCTGGCAGCGAGAGGA +
Preference number: 4 (lower is better)
Translates to: AHLLPSLLIKSKGNSRPNILSSV*SLAARG
Trigger: TCCTCTCGCTGCCAGACTTCATACGGAAGAAAGGAT...GTTAGGCCTGCTGTTCCCTTTGCTCTTGATTAGGAGAGATGGAAGGAGATGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR TCA 90 bp ATCCACCGCATTGTTGTTTGTATTGGCATATGGAGTGACCTCACCATCCAACAGCACCACGATGATCACTaGGAAAAGGATGGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: IHRIVVCIGIWSDLTIQQHHDDH*EKDGCP
Trigger: GGGGCAGCCATCCTTTTCTCAGTGATCATCGTGGTG...CTGTTGGATGGTGAGGTCACTCCATATGCCAATACAAACAACAATGCGGTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR TCA 90 bp TTCCTCATCCAGGAGTGGTGTTCGTGGCAACTCCTCCTCTATGGCGAATTCAGGTCACTAACACCACGATaGTCACTGAGAAAAGGATGG +
Preference number: 4 (lower is better)
Translates to: FLIQEWCSWQLLLYGEFRSLTPR*SLRKGW
Trigger: CCATCCTTTTCTCAGTGATCATCGTGGTGTTAGTGA...CCTGAATTCGCCATAGAGGAGGAGTTGCCACGAACACCACTCCTGGATGAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR TCA 90 bp TTGTTGTTTGTATTGGCATATGGAGTGACCTCACCATCCAACAGGAGCACCCTAGGGAGCTGGATGAGTTaGCCGTTTCGGATGATGGAG +
Preference number: 4 (lower is better)
Translates to: LLFVLAYGVTSPSNRSTLGSWMS*PFRMME
Trigger: CTCCATCATCCGAAACGGTCAACTCATCCAGCTCCC...TAGGGTGCTCCTGTTGGATGGTGAGGTCACTCCATATGCCAATACAAACAACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR TCA 90 bp CATACTGTGATGGTACCACGGGCTGCTTCAATTGTAAGGCAAAGGAAGCAGGAATGTCCAGGGACTTCTTaGCATGGTCAGATTCCCCTG +
Preference number: 4 (lower is better)
Translates to: HTVMVPRAASIVRQRKQECPGTS*HGQIPL
Trigger: CAGGGGAATCTGACCATGTCAAGAAGTCCCTGGACA...TTCCTGCTTCCTTTGCCTTACAATTGAAGCAGCCCGTGGTACCATCACAGTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR TCA 90 bp GCAAAAATTAGAATCAGAAACTGGAGAGAATGTCGAAGCTGGTCCCCAGGCACCTGTCCAGGGACTTCTTaGCATGGTCAGATTCCCCTG +
Preference number: 4 (lower is better)
Translates to: AKIRIRNWRECRSWSPGTCPGTS*HGQIPL
Trigger: CAGGGGAATCTGACCATGTCAAGAAGTCCCTGGACA...GGTGCCTGGGGACCAGCTTCGACATTCTCTCCAGTTTCTGATTCTAATTTTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR TCA 90 bp GTGATCTCTCTCTTAACCCCTTTAGGGACAGGAGAGTCATTCCAGAGGACAGATCCTGCTTCAGATCTGTaGCAAAGCCTAGCAGAGCAC +
Preference number: 4 (lower is better)
Translates to: VISLLTPLGTGESFQRTDPASDL*QSLAEH
Trigger: GTGCTCTGCTAGGCTTTGTCACAGATCTGAAGCAGG...ATCTGTCCTCTGGAATGACTCTCCTGTCCCTAAAGGGGTTAAGAGAGAGATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR TCA 90 bp CCAAAGAGGAGCCCACAAAAGTCTGCTTTGATGGTCTGTCTTGTCCTAGATTTGTACACTTGCGCAAGATaGTCTCAGAGGCGCCCTTGC +
Preference number: 4 (lower is better)
Translates to: PKRSPQKSALMVCLVLDLYTCAR*SQRRPC
Trigger: GCAAGGGCGCCTCTGAGATCATCTTGCGCAAGTGTA...CAAATCTAGGACAAGACAGACCATCAAAGCAGACTTTTGTGGGCTCCTCTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR TCA 90 bp TGGCAACTCCTCCTCTATGGCGAATTCAGGGTGGGTCATGAAGCTGTGGATGGACTCTGTCTTTATTCTTaGATGGCACTGCTTCCCCTT +
Preference number: 4 (lower is better)
Translates to: WQLLLYGEFRVGHEAVDGLCLYS*MALLPL
Trigger: AAGGGGAAGCAGTGCCATTCAAGAATAAAGACAGAG...TCCATCCACAGCTTCATGACCCACCCTGAATTCGCCATAGAGGAGGAGTTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR TCA 90 bp GGCTGGAATGGCTTAACAATAGCAGGCATTTATAAGTGCCCACCCTCACCAATGAGGCCATGGGCTCGATaGCAGTGCGTACCATATCAT +
Preference number: 4 (lower is better)
Translates to: GWNGLTIAGIYKCPPSPMRPWAR*QCVPYH
Trigger: ATGATATGGTACGCACTGTCATCGAGCCCATGGCCT...CATTGGTGAGGGTGGGCACTTATAAATGCCTGCTATTGTTAAGCCATTCCAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR TCA 90 bp TCTCCCAAGGCTTCTGAACACTCATTCCCCACCAGTCAGGTCCTGCCCTGGAGAATATTTGTCTCCCTCTaGACCCTCAACTTAGCTTAT +
Preference number: 4 (lower is better)
Translates to: SPKASEHSFPTSQVLPWRIFVSL*TLNLAY
Trigger: ATAAGCTAAGTTGAGGGTTCAGAGGGAGACAAATAT...TCTCCAGGGCAGGACCTGACTGGTGGGGAATGAGTGTTCAGAAGCCTTGGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR TCA 90 bp TCTTTATGTTTCCTACTGTGGACAGCTCAGGTGAAAGGGGTGAGGGAGGACAGAGACCTCTCAGGTTCCTaGAAGAAAAAGGGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: SLCFLLWTAQVKGVREDRDLSGS*KKKGAG
Trigger: TCCTGCACCCTTTTTCTTTCAGGAACCTGAGAGGTC...TCTGTCCTCCCTCACCCCTTTCACCTGAGCTGTCCACAGTAGGAAACATAAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR TCA 90 bp ACTGGGGGAGCTGCACTTGGTTGCAATCCACCGCATTGTTGTTTGTATTGGCATACCTGTCAGGCACCATaGGAACCTTTTGTGAACAGG +
Preference number: 4 (lower is better)
Translates to: TGGAALGCNPPHCCLYWHTCQAP*EPFVNR
Trigger: CCTGTTCACAAAAGGTTCTCATGGTGCCTGACAGGT...ATGCCAATACAAACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCCCCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367218.7
CDS-3UTR TCA 90 bp ATGGCTTTGAAAGCAGTGGTCACCCCAAAGAGGAGCCCACAAAAGTCTGCTTTGACCTGTCAGGCACCATaGGAACCTTTTGTGAACAGG +
Preference number: 4 (lower is better)
Translates to: MALKAVVTPKRSPQKSALTCQAP*EPFVNR
Trigger: CCTGTTCACAAAAGGTTCTCATGGTGCCTGACAGGT...CAAAGCAGACTTTTGTGGGCTCCTCTTTGGGGTGACCACTGCTTTCAAAGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR TCA 90 bp TCTCCCAAGGCTTCTGAACACTCATTCCCCACCAGTCAGGTCCTGCCCTGGAGATTCCACAGGGCTACATaGCGGCACTTTATTTTAAAT +
Preference number: 4 (lower is better)
Translates to: SPKASEHSFPTSQVLPWRFHRAT*RHFILN
Trigger: ATTTAAAATAAAGTGCCGTCATGTAGCCCTGTGGAA...TCTCCAGGGCAGGACCTGACTGGTGGGGAATGAGTGTTCAGAAGCCTTGGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR TCA 90 bp TGTCCAGAGGGATTTCTAGGTGATCTCTCTCTTAACCCCTTTAGGGACAGGAGAGAGAGGAAGCTAGGATaGTACGTTCTCCTTCTCCCC +
Preference number: 4 (lower is better)
Translates to: CPEGFLGDLSLNPFRDRRERKLG*YVLLLP
Trigger: GGGGAGAAGGAGAACGTATCATCCTAGCTTCCTCTC...TCTCCTGTCCCTAAAGGGGTTAAGAGAGAGATCACCTAGAAATCCCTCTGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR TCA 90 bp GGGGAGCTGCACTTGGTTGCAATCCACCGCATTGTTGTTTGTATTGGCATATGGGGAAGATTCATTTCCTaGCAGCTGTGTCCCTTGCTG +
Preference number: 4 (lower is better)
Translates to: GELHLVAIHRIVVCIGIWGRFIS*QLCPLL
Trigger: CAGCAAGGGACACAGCTGTCAGGAAATGAATCTTCC...CCATATGCCAATACAAACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367218.7
CDS-3UTR TCA 90 bp GGCTGGAATGGCTTAACAATAGCAGGCATTTATAAGTGCCCACCCTCACCAATGGCCAACTCTCCTCTCTaGAGCTCAAGGGGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: GWNGLTIAGIYKCPPSPMANSPL*SSRGRR
Trigger: TCTTCTTCCCCTTGAGCTTCAGAGAGGAGAGTTGGC...CATTGGTGAGGGTGGGCACTTATAAATGCCTGCTATTGTTAAGCCATTCCAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR TCA 90 bp GAGCCTTGGCAGATGGCTTTGAAAGCAGTGGTCACCCCAAAGAGGAGCCCACAAGGTGCACTGTTAAGCTaGATTGCAAATTATGGCAAC +
Preference number: 4 (lower is better)
Translates to: EPWQMALKAVVTPKRSPQGALLS*IANYGN
Trigger: GTTGCCATAATTTGCAATTCAGCTTAACAGTGCACC...TTGTGGGCTCCTCTTTGGGGTGACCACTGCTTTCAAAGCCATCTGCCAAGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR GCA 90 bp CGCATTGTTGTTTGTATTGGCATATGGAGTGACCTCACCATCCAACAGGAGCACCTTCTTCCTACTTCTTaGTTCTCTGGGGGCCCAGTG +
Preference number: 4 (lower is better)
Translates to: RIVVCIGIWSDLTIQQEHLLPTS*FSGGPV
Trigger: CACTGGGCCCCCAGAGAAGCAAGAAGTAGGAAGAAG...GTGCTCCTGTTGGATGGTGAGGTCACTCCATATGCCAATACAAACAACAATGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR GCA 90 bp CCTTGTAAGTCTGTGCTCTTGCCTCTTCATGGTCAGGTAGAGGTTCACTTCACACTGACCAGTGTCTCCTaGCTCCCTGTCTCAACTTCT +
Preference number: 4 (lower is better)
Translates to: PCKSVLLPLHGQVEVHFTLTSVS*LPVSTS
Trigger: AGAAGTTGAGACAGGGAGGCAGGAGACACTGGTCAG...TGTGAAGTGAACCTCTACCTGACCATGAAGAGGCAAGAGCACAGACTTACAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000357681.10
ENST00000367218.7
CDS-3UTR GCA 90 bp TCTTTATGTTTCCTACTGTGGACAGCTCAGGTGAAAGGGGTGAGGGAGGACAGAATGGGTTCGTCATTTTaGCTGCTGTTACCAAGCCCC +
Preference number: 4 (lower is better)
Translates to: SLCFLLWTAQVKGVREDRMGSSF*LLLPSP
Trigger: GGGGCTTGGTAACAGCAGGCAAAATGACGAACCCAT...TCTGTCCTCCCTCACCCCTTTCACCTGAGCTGTCCACAGTAGGAAACATAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR GCA 90 bp AGCTGTCCGACTGGGGGAGCTGCACTTGGTTGCAATCCACCGCATTGTTGTTTGAGGTTTTCAGTCTACTaGAGAGATTCTGTACACCTC +
Preference number: 4 (lower is better)
Translates to: SCPTGGAALGCNPPHCCLRFSVY*RDSVHL
Trigger: GAGGTGTACAGAATCTCTGCAGTAGACTGAAAACCT...CAAACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCCCCAGTCGGACAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR GCA 90 bp CCTTGTAAGTCTGTGCTCTTGCCTCTTCATGGTCAGGTAGAGGTTCACTTCACAACGTTTCTCCAGATCTaGAGGGTTCCCAGACAGACC +
Preference number: 4 (lower is better)
Translates to: PCKSVLLPLHGQVEVHFTTFLQI*RVPRQT
Trigger: GGTCTGTCTGGGAACCCTGCAGATCTGGAGAAACGT...TGTGAAGTGAACCTCTACCTGACCATGAAGAGGCAAGAGCACAGACTTACAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000357681.10
ENST00000367218.7
CDS-3UTR GCA 90 bp TGGCAACTCCTCCTCTATGGCGAATTCAGGGTGGGTCATGAAGCTGTGGATGGAAATCCAGCCAGCTTGTaGCTCATTTTCATCTTCTGG +
Preference number: 4 (lower is better)
Translates to: WQLLLYGEFRVGHEAVDGNPASL*LIFIFW
Trigger: CCAGAAGATGAAAATGAGGCACAAGCTGGCTGGATT...TCCATCCACAGCTTCATGACCCACCCTGAATTCGCCATAGAGGAGGAGTTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR GCA 90 bp CACAGACTTGTAGGACAAAATCCAGAATTCAGGAGAGGAACATCGGGGAGAATGTGTTCAATGCGGCACTaGAGCCCCCGGAATTGCTTC +
Preference number: 4 (lower is better)
Translates to: HRLVGQNPEFRRGTSGRMCSMRH*SPRNCF
Trigger: GAAGCAATTCCGGGGGCTGCAGTGCCGCATTGAACA...CATTCTCCCCGATGTTCCTCTCCTGAATTCTGGATTTTGTCCTACAAGTCTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000357681.10
ENST00000367218.7
CDS-3UTR GCA 90 bp CAGAGAAAGAAAATTCAAACTGATGTCTCTAGGCTCTGTAGAGAGCTGTCCGACTTTGCTCCTGTTCAATaGGGCACTGCAGCCCCCGGA +
Preference number: 4 (lower is better)
Translates to: QRKKIQTDVSRLCRELSDFAPVQ*GTAAPG
Trigger: TCCGGGGGCTGCAGTGCCGCATTGAACAGGAGCAAA...GTCGGACAGCTCTCTACAGAGCCTAGAGACATCAGTTTGAATTTTCTTTCTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR GCA 90 bp GAGCCCACAAAAGTCTGCTTTGATGGTCTGTCTTGTCCTAGATTTGGCAGCGTCGATCAGGATTCCATCTaGAGGCAGCAGATCACCGTA +
Preference number: 4 (lower is better)
Translates to: EPTKVCFDGLSCPRFGSVDQDSI*RQQITV
Trigger: TACGGTGATCTGCTGCCTGCAGATGGAATCCTGATC...GACGCTGCCAAATCTAGGACAAGACAGACCATCAAAGCAGACTTTTGTGGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR GCA 90 bp AGCTGTCCGACTGGGGGAGCTGCACTTGGTTGCAATCCACCGCATTGTTGTTTGTCACAAGCATCCAAGTaGCGTACTAGGTTATTGTCT +
Preference number: 4 (lower is better)
Translates to: SCPTGGAALGCNPPHCCLSQASK*RTRLLS
Trigger: AGACAATAACCTAGTACGGCACTTGGATGCTTGTGA...CAAACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCCCCAGTCGGACAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR GCA 90 bp AATCTCCTAGCAAAGTCCCCAACTCCTGAGAGGCAGATGGGAAGGGGATGCTTTGGTTCATGGTCAACGTaGCTGTCTTATCAGAGCAGA +
Preference number: 4 (lower is better)
Translates to: NLLAKSPTPERQMGRGCFGSWST*LSYQSR
Trigger: TCTGCTCTGATAAGACAGGCACGTTGACCATGAACC...AAAGCATCCCCTTCCCATCTGCCTCTCAGGAGTTGGGGACTTTGCTAGGAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR GCA 90 bp ACTGGGGGAGCTGCACTTGGTTGCAATCCACCGCATTGTTGTTTGTATTGGCATCTTGTACCACAGTCATaGGGTTCATGGTCAACGTGC +
Preference number: 4 (lower is better)
Translates to: TGGAALGCNPPHCCLYWHLVPQS*GSWSTC
Trigger: GCACGTTGACCATGAACCGCATGACTGTGGTACAAG...ATGCCAATACAAACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCCCCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR GCA 90 bp TTCTTTATGTTTCCTACTGTGGACAGCTCAGGTGAAAGGGGTGAGGGAGGACAGCTTGTACCACAGTCATaGGGTTCATGGTCAACGTGC +
Preference number: 4 (lower is better)
Translates to: FFMFPTVDSSGERGEGGQLVPQS*GSWSTC
Trigger: GCACGTTGACCATGAACCGCATGACTGTGGTACAAG...CTGTCCTCCCTCACCCCTTTCACCTGAGCTGTCCACAGTAGGAAACATAAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR GCA 90 bp CACAGACTTGTAGGACAAAATCCAGAATTCAGGAGAGGAACATCGGGGAGAATGTCTCAGAGGCGCCCTTaGTGTACATACGGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: HRLVGQNPEFRRGTSGRMSQRRP*CTYGSH
Trigger: GTGGCTTCCGTATGTACAGCAAGGGCGCCTCTGAGA...CATTCTCCCCGATGTTCCTCTCCTGAATTCTGGATTTTGTCCTACAAGTCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000357681.10
ENST00000367218.7
CDS-3UTR GCA 90 bp CCAAAGAGGAGCCCACAAAAGTCTGCTTTGATGGTCTGTCTTGTCCTAGATTTGTCTCAGAGGCGCCCTTaGTGTACATACGGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: PKRSPQKSALMVCLVLDLSQRRP*CTYGSH
Trigger: GTGGCTTCCGTATGTACAGCAAGGGCGCCTCTGAGA...CAAATCTAGGACAAGACAGACCATCAAAGCAGACTTTTGTGGGCTCCTCTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR GCA 90 bp CCTGAATGGGGTTTGACTGGGTCCCGCTACAAACCCCAAGTCAAGCTTAAGTTGCAGTGCTGTCAATTATaGCTTTCACCAGGGTGTGCT +
Preference number: 4 (lower is better)
Translates to: PEWGLTGSRYKPQVKLKLQCCQL*LSPGCA
Trigger: AGCACACCCTGGTGAAAGGCATAATTGACAGCACTG...CAACTTAAGCTTGACTTGGGGTTTGTAGCGGGACCCAGTCAAACCCCATTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000357681.10
ENST00000367218.7
CDS-3UTR GCA 90 bp GACCTCACCATCCAACAGGAGCACCCTAGTCCCAAACTTAGAAGCCTTGTCAGGGGTGTTCCCCAACAGTaGTGTCAATTATGCCTTTCA +
Preference number: 4 (lower is better)
Translates to: DLTIQQEHPSPKLRSLVRGVPQQ*CQLCLS
Trigger: TGAAAGGCATAATTGACAGCACTGTTGGGGAACACC...CCTGACAAGGCTTCTAAGTTTGGGACTAGGGTGCTCCTGTTGGATGGTGAGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR GCA 90 bp TGGGGGAGCTGCACTTGGTTGCAATCCACCGCATTGTTGTTTGTATTGGCATATCCTTTGCTACATCTGTaGCTGCGATGCCCATGGCAA +
Preference number: 4 (lower is better)
Translates to: WGSCTWLQSTALLFVLAYPLLHL*LRCPWQ
Trigger: TTGCCATGGGCATCGCAGGCACAGATGTAGCAAAGG...ATATGCCAATACAAACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR GCA 90 bp TACCACTCTGCCAGCTATTCTTCAAGAAACACAAATCCAACAGAGGCCCCTGATTCTTTGGTGGTGCCATaGCCAGCCTCCTTCAGGAAC +
Preference number: 4 (lower is better)
Translates to: YHSASYSSRNTNPTEAPDSLVVP*PASFRN
Trigger: GTTCCTGAAGGAGGCTGGGCATGGCACCACCAAAGA...ATCAGGGGCCTCTGTTGGATTTGTGTTTCTTGAAGAATAGCTGGCAGAGTGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR GCA 90 bp ATGCAACCTTCATGGGCAAGGCTGATCTCCCTGGCACTTAAGAACCACATACACGGAGCTGCACTTGGTTaGAATCCACCGCATTGTTGT +
Preference number: 4 (lower is better)
Translates to: MQPSWARLISLALKNHIHGAALG*NPPHCC
Trigger: ACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCC...GTGTATGTGGTTCTTAAGTGCCAGGGAGATCAGCCTTGCCCATGAAGGTTGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR GCA 90 bp GAGCCCACAAAAGTCTGCTTTGATGGTCTGTCTTGTCCTAGATTTGGCAGCGTCGGAGCTGCACTTGGTTaGAATCCACCGCATTGTTGT +
Preference number: 4 (lower is better)
Translates to: EPTKVCFDGLSCPRFGSVGAALG*NPPHCC
Trigger: ACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCC...GACGCTGCCAAATCTAGGACAAGACAGACCATCAAAGCAGACTTTTGTGGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR GCA 90 bp TGCACAGCAGTATTGGTTTCTGTTCATCAGCAAAAAGCTTTATTGGCTCCAACACCACCAGTCAGGTCCTaGCCTGGAGAGCCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: CTAVLVSVHQQKALLAPTPPVRS*PGEPWQ
Trigger: CTGCCAAGGCTCTCCAGGGCAGGACCTGACTGGTGG...TGTTGGAGCCAATAAAGCTTTTTGCTGATGAACAGAAACCAATACTGCTGTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR GCA 90 bp ACTGGGGGAGCTGCACTTGGTTGCAATCCACCGCATTGTTGTTTGTATTGGCATTACAAATGGAGCTCCTaGAAACGTGGCTCCACGTTG +
Preference number: 4 (lower is better)
Translates to: TGGAALGCNPPHCCLYWHYKWSS*KRGSTL
Trigger: CAACGTGGAGCCACGTTTGCAGGAGCTCCATTTGTA...ATGCCAATACAAACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCCCCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367218.7
CDS-3UTR GCA 90 bp TTCTTTATGTTTCCTACTGTGGACAGCTCAGGTGAAAGGGGTGAGGGAGGACAGAAACAGCTGGTTATGTaGTCCCTTCCACAGGGCTAC +
Preference number: 4 (lower is better)
Translates to: FFMFPTVDSSGERGEGGQKQLVM*SLPQGY
Trigger: GTAGCCCTGTGGAAGGGAGCACATAACCAGCTGTTT...CTGTCCTCCCTCACCCCTTTCACCTGAGCTGTCCACAGTAGGAAACATAAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp ATGGCTTTGAAAGCAGTGGTCACCCCAAAGAGGAGCCCACAAAAGTCTGCTTTGGAACTGAGTGGAAGGTaGACTCCGTGTCACGATGAT +
Preference number: 4 (lower is better)
Translates to: MALKAVVTPKRSPQKSALELSGR*TPCHDD
Trigger: ATCATCGTGACACGGAGTCCACCTTCCACTCAGTTC...CAAAGCAGACTTTTGTGGGCTCCTCTTTGGGGTGACCACTGCTTTCAAAGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CCA 90 bp ATCCAACAGGAGCACCCTAGTCCCAAACTTAGAAGCCTTGTCAGGATTTTCCTCAGGGCCACTCCGTCTTaGGTCTTTGCTTTGTTGCGA +
Preference number: 4 (lower is better)
Translates to: IQQEHPSPKLRSLVRIFLRATPS*VFALLR
Trigger: TCGCAACAAAGCAAAGACCCAAGACGGAGTGGCCCT...GAGGAAAATCCTGACAAGGCTTCTAAGTTTGGGACTAGGGTGCTCCTGTTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR CCA 90 bp AAATGGCACAGACTTGTAGGACAAAATCCAGAATTCAGGAGAGGAACATCGGGGGCCTCCCTCCTTCTCTaGAGGCAGAATCTTGGAGGT +
Preference number: 4 (lower is better)
Translates to: KWHRLVGQNPEFRRGTSGASLLL*RQNLGG
Trigger: ACCTCCAAGATTCTGCCTCCAGAGAAGGAGGGAGGC...CCCCGATGTTCCTCTCCTGAATTCTGGATTTTGTCCTACAAGTCTGTGCCATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CCA 90 bp TGGCAACTCCTCCTCTATGGCGAATTCAGGGTGGGTCATGAAGCTGTGGATGGACTGCACAGCTTTCAATaGGGAATCCTGAGTGATACA +
Preference number: 4 (lower is better)
Translates to: WQLLLYGEFRVGHEAVDGLHSFQ*GILSDT
Trigger: TGTATCACTCAGGATTCCCCATTGAAAGCTGTGCAG...TCCATCCACAGCTTCATGACCCACCCTGAATTCGCCATAGAGGAGGAGTTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR CCA 90 bp ATGCAACCTTCATGGGCAAGGCTGATCTCCCTGGCACTTAAGAACCACATACACTGGTATAGTGCTGGCTaGGTGGTGAATGTAGAGGTG +
Preference number: 4 (lower is better)
Translates to: MQPSWARLISLALKNHIHWYSAG*VVNVEV
Trigger: CACCTCTACATTCACCACCCAGCCAGCACTATACCA...GTGTATGTGGTTCTTAAGTGCCAGGGAGATCAGCCTTGCCCATGAAGGTTGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CCA 90 bp ACTGGGGGAGCTGCACTTGGTTGCAATCCACCGCATTGTTGTTTGTATTGGCATATGGCGAATTCAGGGTaGGTCATGAAGCTGTGGATG +
Preference number: 4 (lower is better)
Translates to: TGGAALGCNPPHCCLYWHMANSG*VMKLWM
Trigger: CATCCACAGCTTCATGACCCACCCTGAATTCGCCAT...ATGCCAATACAAACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCCCCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR CCA 90 bp ATGGCTTTGAAAGCAGTGGTCACCCCAAAGAGGAGCCCACAAAAGTCTGCTTTGATGGCGAATTCAGGGTaGGTCATGAAGCTGTGGATG +
Preference number: 4 (lower is better)
Translates to: MALKAVVTPKRSPQKSALMANSG*VMKLWM
Trigger: CATCCACAGCTTCATGACCCACCCTGAATTCGCCAT...CAAAGCAGACTTTTGTGGGCTCCTCTTTGGGGTGACCACTGCTTTCAAAGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CCA 90 bp CCTTGTAAGTCTGTGCTCTTGCCTCTTCATGGTCAGGTAGAGGTTCACTTCACATTCCTCATCCAGGAGTaGTGTTCGTGGCAACTCCTC +
Preference number: 4 (lower is better)
Translates to: PCKSVLLPLHGQVEVHFTFLIQE*CSWQLL
Trigger: GAGGAGTTGCCACGAACACCACTCCTGGATGAGGAA...TGTGAAGTGAACCTCTACCTGACCATGAAGAGGCAAGAGCACAGACTTACAAGG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CCA 90 bp AAATGGCACAGACTTGTAGGACAAAATCCAGAATTCAGGAGAGGAACATCGGGGACATCGGGGAGAATGTaGGGTGGGGTGATGCCAAGA +
Preference number: 4 (lower is better)
Translates to: KWHRLVGQNPEFRRGTSGTSGRM*GGVMPR
Trigger: TCTTGGCATCACCCCACCCCACATTCTCCCCGATGT...CCCCGATGTTCCTCTCCTGAATTCTGGATTTTGTCCTACAAGTCTGTGCCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000341360.6
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp GCTCATCTCCTTCCATCTCTCCTAATCAAGAGCAAAGGGAACAGCAGGCCTAACGGGAAGGGGATGCTTTaGGCAGTATTCAGGGGAAAA +
Preference number: 4 (lower is better)
Translates to: AHLLPSLLIKSKGNSRPNGKGML*AVFRGK
Trigger: TTTTCCCCTGAATACTGCCCAAAGCATCCCCTTCCC...GTTAGGCCTGCTGTTCCCTTTGCTCTTGATTAGGAGAGATGGAAGGAGATGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp GGCTGGAATGGCTTAACAATAGCAGGCATTTATAAGTGCCCACCCTCACCAATGCAGCAGGGATACAAATaGAGCTCCTGCAAACGTGGC +
Preference number: 4 (lower is better)
Translates to: GWNGLTIAGIYKCPPSPMQQGYK*SSCKRG
Trigger: GCCACGTTTGCAGGAGCTCCATTTGTATCCCTGCTG...CATTGGTGAGGGTGGGCACTTATAAATGCCTGCTATTGTTAAGCCATTCCAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp TCTTTATGTTTCCTACTGTGGACAGCTCAGGTGAAAGGGGTGAGGGAGGACAGAGTCAGGGACATGAACTaGCCCCTACACAGAAGTCAA +
Preference number: 4 (lower is better)
Translates to: SLCFLLWTAQVKGVREDRVRDMN*PLHRSQ
Trigger: TTGACTTCTGTGTAGGGGCCAGTTCATGTCCCTGAC...TCTGTCCTCCCTCACCCCTTTCACCTGAGCTGTCCACAGTAGGAAACATAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp CCTGAATGGGGTTTGACTGGGTCCCGCTACAAACCCCAAGTCAAGCTTAAGTTGTCTCACATGGGAATTTaGCCGTTCATACATCCCCTC +
Preference number: 4 (lower is better)
Translates to: PEWGLTGSRYKPQVKLKLSHMGI*PFIHPL
Trigger: GAGGGGATGTATGAACGGCCAAATTCCCATGTGAGA...CAACTTAAGCTTGACTTGGGGTTTGTAGCGGGACCCAGTCAAACCCCATTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR TCA 90 bp CCTTGTAAGTCTGTGCTCTTGCCTCTTCATGGTCAGGTAGAGGTTCACTTCACAATCCTTTCTTCCGTATaGAGTCTGGCAGCGAGAGGA +
Preference number: 4 (lower is better)
Translates to: PCKSVLLPLHGQVEVHFTILSSV*SLAARG
Trigger: TCCTCTCGCTGCCAGACTTCATACGGAAGAAAGGAT...TGTGAAGTGAACCTCTACCTGACCATGAAGAGGCAAGAGCACAGACTTACAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000357681.10
ENST00000367218.7
CDS-3UTR TCA 90 bp GGGGAGCTGCACTTGGTTGCAATCCACCGCATTGTTGTTTGTATTGGCATATGGTCTCTGGGGGCCCAGTaGGGGAATAGATTGAATATA +
Preference number: 4 (lower is better)
Translates to: GELHLVAIHRIVVCIGIWSLGAQ*GNRLNI
Trigger: TATATTCAATCTATTCCCTCACTGGGCCCCCAGAGA...CCATATGCCAATACAAACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR TCA 90 bp ACTGGGGGAGCTGCACTTGGTTGCAATCCACCGCATTGTTGTTTGTATTGGCATTTGAACGCAGCTCCATaGGCTTCCTCAGTTCCATTA +
Preference number: 4 (lower is better)
Translates to: TGGAALGCNPPHCCLYWHLNAAP*ASSVPL
Trigger: TAATGGAACTGAGGAAGCTCATGGAGCTGCGTTCAA...ATGCCAATACAAACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCCCCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR TCA 90 bp GGGGAGCTGCACTTGGTTGCAATCCACCGCATTGTTGTTTGTATTGGCATATGGGGGGTAGTTGCGACTTaGCCACACAGTTCATTTTCT +
Preference number: 4 (lower is better)
Translates to: GELHLVAIHRIVVCIGIWGVVAT*PHSSFS
Trigger: AGAAAATGAACTGTGTGGTCAAGTCGCAACTACCCC...CCATATGCCAATACAAACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCCC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR TCA 90 bp GAAACTGGAGAGAATGTCGAAGCTGGTCCCCAGGCACCTAAGCTCAAGGTTTCTTCACTAACACCACGATaGTCACTGAGAAAAGGATGG +
Preference number: 4 (lower is better)
Translates to: ETGENVEAGPQAPKLKVSSLTPR*SLRKGW
Trigger: CCATCCTTTTCTCAGTGATCATCGTGGTGTTAGTGA...AGAAACCTTGAGCTTAGGTGCCTGGGGACCAGCTTCGACATTCTCTCCAGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR TCA 90 bp CAGAGAAAGAAAATTCAAACTGATGTCTCTAGGCTCTGTAGAGAGCTGTCCGACGGGAGCTGGATGAGTTaGCCGTTTCGGATGATGGAG +
Preference number: 4 (lower is better)
Translates to: QRKKIQTDVSRLCRELSDGSWMS*PFRMME
Trigger: CTCCATCATCCGAAACGGTCAACTCATCCAGCTCCC...GTCGGACAGCTCTCTACAGAGCCTAGAGACATCAGTTTGAATTTTCTTTCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR TCA 90 bp TTGTTGTTTGTATTGGCATATGGAGTGACCTCACCATCCAACAGGAGCACCCTACCTGCTTCAGATCTGTaGCAAAGCCTAGCAGAGCAC +
Preference number: 4 (lower is better)
Translates to: LLFVLAYGVTSPSNRSTLPASDL*QSLAEH
Trigger: GTGCTCTGCTAGGCTTTGTCACAGATCTGAAGCAGG...TAGGGTGCTCCTGTTGGATGGTGAGGTCACTCCATATGCCAATACAAACAACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR TCA 90 bp CCTTGTAAGTCTGTGCTCTTGCCTCTTCATGGTCAGGTAGAGGTTCACTTCACAGTTGCGGTAGATGCCTaGAAAGACGTTCTTCTCTCC +
Preference number: 4 (lower is better)
Translates to: PCKSVLLPLHGQVEVHFTVAVDA*KDVLLS
Trigger: GGAGAGAAGAACGTCTTTTCAGGCATCTACCGCAAC...TGTGAAGTGAACCTCTACCTGACCATGAAGAGGCAAGAGCACAGACTTACAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000357681.10
ENST00000367218.7
CDS-3UTR TCA 90 bp GGCTGGAATGGCTTAACAATAGCAGGCATTTATAAGTGCCCACCCTCACCAATGGTTCTCCAATCCCAATaGAGAGACACCACAGCCACT +
Preference number: 4 (lower is better)
Translates to: GWNGLTIAGIYKCPPSPMVLQSQ*RDTTAT
Trigger: AGTGGCTGTGGTGTCTCTTCATTGGGATTGGAGAAC...CATTGGTGAGGGTGGGCACTTATAAATGCCTGCTATTGTTAAGCCATTCCAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR TCA 90 bp TTGGTTAAAGTGGATGCCACGTGCTCTCTTGTGGTCATTTTAGCAAATCATGCACCTCGGCATCCTTGGTaGTCTCCTCTTTGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: LVKVDATCSLVVILANHAPRHPW*SPLWWC
Trigger: GCACCACCAAAGAGGAGATCACCAAGGATGCCGAGG...TGCATGATTTGCTAAAATGACCACAAGAGAGCACGTGGCATCCACTTTAACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356729.5
CDS-3UTR TCA 90 bp TGTCCAGAGGGATTTCTAGGTGATCTCTCTCTTAACCCCTTTAGGGACAGGAGATGGTGGGGGAAGATTTaGCTGGTGCAACTGCTACAT +
Preference number: 4 (lower is better)
Translates to: CPEGFLGDLSLNPFRDRRWWGKI*LVQLLH
Trigger: ATGTAGCAGTTGCACCAGTCAAATCTTCCCCCACCA...TCTCCTGTCCCTAAAGGGGTTAAGAGAGAGATCACCTAGAAATCCCTCTGGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367218.7
ENST00000484746.1
CDS-3UTR TCA 90 bp CATACTGTGATGGTACCACGGGCTGCTTCAATTGTAAGGCAAAGGAAGCAGGAAGACCTCTCAGGTTCCTaGAAGAAAAAGGGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: HTVMVPRAASIVRQRKQEDLSGS*KKKGAG
Trigger: TCCTGCACCCTTTTTCTTTCAGGAACCTGAGAGGTC...TTCCTGCTTCCTTTGCCTTACAATTGAAGCAGCCCGTGGTACCATCACAGTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR TCA 90 bp AGTGAAAGGGCGTCTGGTCTATTCAGAGGAAGAGGCTGGAATGGCTTAACAATACTTCATGGGCAAGGCTaGTCTCCCTGGCACTTAAGA +
Preference number: 4 (lower is better)
Translates to: SERASGLFRGRGWNGLTILHGQG*SPWHLR
Trigger: TCTTAAGTGCCAGGGAGATCAGCCTTGCCCATGAAG...TATTGTTAAGCCATTCCAGCCTCTTCCTCTGAATAGACCAGACGCCCTTTCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR TCA 90 bp CCAAAGAGGAGCCCACAAAAGTCTGCTTTGATGGTCTGTCTTGTCCTAGATTTGCTTCATGGGCAAGGCTaGTCTCCCTGGCACTTAAGA +
Preference number: 4 (lower is better)
Translates to: PKRSPQKSALMVCLVLDLLHGQG*SPWHLR
Trigger: TCTTAAGTGCCAGGGAGATCAGCCTTGCCCATGAAG...CAAATCTAGGACAAGACAGACCATCAAAGCAGACTTTTGTGGGCTCCTCTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR TCA 90 bp AAATGGCACAGACTTGTAGGACAAAATCCAGAATTCAGGAGAGGAACATCGGGGCTTCATGGGCAAGGCTaGTCTCCCTGGCACTTAAGA +
Preference number: 4 (lower is better)
Translates to: KWHRLVGQNPEFRRGTSGLHGQG*SPWHLR
Trigger: TCTTAAGTGCCAGGGAGATCAGCCTTGCCCATGAAG...CCCCGATGTTCCTCTCCTGAATTCTGGATTTTGTCCTACAAGTCTGTGCCATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR TCA 90 bp CACAGACTTGTAGGACAAAATCCAGAATTCAGGAGAGGAACATCGGGGAGAATGCTTGGCAGATGGCTTTaGAAGCAGTGGTCACCCCAA +
Preference number: 4 (lower is better)
Translates to: HRLVGQNPEFRRGTSGRMLGRWL*KQWSPQ
Trigger: TTGGGGTGACCACTGCTTTCAAAGCCATCTGCCAAG...CATTCTCCCCGATGTTCCTCTCCTGAATTCTGGATTTTGTCCTACAAGTCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR TCA 90 bp TACCACTCTGCCAGCTATTCTTCAAGAAACACAAATCCAACAGAGGCCCCTGATAGTCTCTGCATACTGTaGTGGTACCACGGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: YHSASYSSRNTNPTEAPDSLCIL*WYHGLL
Trigger: AAGCAGCCCGTGGTACCATCACAGTATGCAGAGACT...ATCAGGGGCCTCTGTTGGATTTGTGTTTCTTGAAGAATAGCTGGCAGAGTGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR GCA 90 bp CCTTGTAAGTCTGTGCTCTTGCCTCTTCATGGTCAGGTAGAGGTTCACTTCACAATGGGTTCGTCATTTTaGCTGCTGTTACCAAGCCCC +
Preference number: 4 (lower is better)
Translates to: PCKSVLLPLHGQVEVHFTMGSSF*LLLPSP
Trigger: GGGGCTTGGTAACAGCAGGCAAAATGACGAACCCAT...TGTGAAGTGAACCTCTACCTGACCATGAAGAGGCAAGAGCACAGACTTACAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000357681.10
ENST00000367218.7
CDS-3UTR GCA 90 bp ACTGGGGGAGCTGCACTTGGTTGCAATCCACCGCATTGTTGTTTGTATTGGCATTCAGTTCCATTACTGTaGAGCCAAAGTCCCCTTCAC +
Preference number: 4 (lower is better)
Translates to: TGGAALGCNPPHCCLYWHSVPLL*SQSPLH
Trigger: GTGAAGGGGACTTTGGCTGCACAGTAATGGAACTGA...ATGCCAATACAAACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCCCCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR GCA 90 bp ATCCACCGCATTGTTGTTTGTATTGGCATATGGAGTGACCTCACCATCCAACAGACGTTTCTCCAGATCTaGAGGGTTCCCAGACAGACC +
Preference number: 4 (lower is better)
Translates to: IHRIVVCIGIWSDLTIQQTFLQI*RVPRQT
Trigger: GGTCTGTCTGGGAACCCTGCAGATCTGGAGAAACGT...CTGTTGGATGGTGAGGTCACTCCATATGCCAATACAAACAACAATGCGGTGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR GCA 90 bp ATGGCTTTGAAAGCAGTGGTCACCCCAAAGAGGAGCCCACAAAAGTCTGCTTTGATCTTCTGGGGTAGTTaGGACTTGACCACACAGTTC +
Preference number: 4 (lower is better)
Translates to: MALKAVVTPKRSPQKSALIFWGS*DLTTQF
Trigger: GAACTGTGTGGTCAAGTCGCAACTACCCCAGAAGAT...CAAAGCAGACTTTTGTGGGCTCCTCTTTGGGGTGACCACTGCTTTCAAAGCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR GCA 90 bp GAGGAAGTCTCTGCATACTGTGATGGTACCACGGGCTGCTTCAATTGTAAGGCATTGTCCAGCTTTTCTTaGTCTACCTCGCCTTTCTCG +
Preference number: 4 (lower is better)
Translates to: EEVSAYCDGTTGCFNCKALSSFS*STSPFS
Trigger: CGAGAAAGGCGAGGTAGAGCAAGAAAAGCTGGACAA...TGCCTTACAATTGAAGCAGCCCGTGGTACCATCACAGTATGCAGAGACTTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR GCA 90 bp ATGCAACCTTCATGGGCAAGGCTGATCTCCCTGGCACTTAAGAACCACATACACCAGTGCTGTCAATTATaGCTTTCACCAGGGTGTGCT +
Preference number: 4 (lower is better)
Translates to: MQPSWARLISLALKNHIHQCCQL*LSPGCA
Trigger: AGCACACCCTGGTGAAAGGCATAATTGACAGCACTG...GTGTATGTGGTTCTTAAGTGCCAGGGAGATCAGCCTTGCCCATGAAGGTTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR GCA 90 bp CCTGAATGGGGTTTGACTGGGTCCCGCTACAAACCCCAAGTCAAGCTTAAGTTGGGTGTTCCCCAACAGTaGTGTCAATTATGCCTTTCA +
Preference number: 4 (lower is better)
Translates to: PEWGLTGSRYKPQVKLKLGVPQQ*CQLCLS
Trigger: TGAAAGGCATAATTGACAGCACTGTTGGGGAACACC...CAACTTAAGCTTGACTTGGGGTTTGTAGCGGGACCCAGTCAAACCCCATTCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000357681.10
ENST00000367218.7
CDS-3UTR GCA 90 bp CACAGACTTGTAGGACAAAATCCAGAATTCAGGAGAGGAACATCGGGGAGAATGTGCTACATCTGTGCCTaGGATGCCCATGGCAAAACC +
Preference number: 4 (lower is better)
Translates to: HRLVGQNPEFRRGTSGRMCYICA*DAHGKT
Trigger: GGTTTTGCCATGGGCATCGCAGGCACAGATGTAGCA...CATTCTCCCCGATGTTCCTCTCCTGAATTCTGGATTTTGTCCTACAAGTCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000357681.10
ENST00000367218.7
CDS-3UTR GCA 90 bp ATCCAGGAGTGGTGTTCGTGGCAACTCCTCCTCTATGGCGAATTCAGGGTGGGTAATGAGCTGATAGAATaGATGGCCCAAGATGTTCTT +
Preference number: 4 (lower is better)
Translates to: IQEWCSWQLLLYGEFRVGNELIE*MAQDVL
Trigger: AAGAACATCTTGGGCCATGCATTCTATCAGCTCATT...ACCCACCCTGAATTCGCCATAGAGGAGGAGTTGCCACGAACACCACTCCTGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR GCA 90 bp TTCCTCATCCAGGAGTGGTGTTCGTGGCAACTCCTCCTCTATGGCGAATTCAGGTGTAGGGTTTCTGAATaGTTTCGTGGAGGGAACTAT +
Preference number: 4 (lower is better)
Translates to: FLIQEWCSWQLLLYGEFRCRVSE*FRGGNY
Trigger: ATAGTTCCCTCCACGAAAGCATTCAGAAACCCTACA...CCTGAATTCGCCATAGAGGAGGAGTTGCCACGAACACCACTCCTGGATGAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR GCA 90 bp GAGCTGTCCGACTGGGGGAGCTGCACTTGGTTGCAATCCACCGCATTGTTGTTTGACTGGGGTATACGTTaGTTTGATATCACCATTTGT +
Preference number: 4 (lower is better)
Translates to: ELSDWGSCTWLQSTALLFDWGIR*FDITIC
Trigger: ACAAATGGTGATATCAAAGCAACGTATACCCCAGTC...AAACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCCCCAGTCGGACAGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp CGCATTGTTGTTTGTATTGGCATATGGAGTGACCTCACCATCCAACAGGAGCACGAACTGAGTGGAAGGTaGACTCCGTGTCACGATGAT +
Preference number: 4 (lower is better)
Translates to: RIVVCIGIWSDLTIQQEHELSGR*TPCHDD
Trigger: ATCATCGTGACACGGAGTCCACCTTCCACTCAGTTC...GTGCTCCTGTTGGATGGTGAGGTCACTCCATATGCCAATACAAACAACAATGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR CCA 90 bp AAATGGCACAGACTTGTAGGACAAAATCCAGAATTCAGGAGAGGAACATCGGGGAGGGCCACTCCGTCTTaGGTCTTTGCTTTGTTGCGA +
Preference number: 4 (lower is better)
Translates to: KWHRLVGQNPEFRRGTSGRATPS*VFALLR
Trigger: TCGCAACAAAGCAAAGACCCAAGACGGAGTGGCCCT...CCCCGATGTTCCTCTCCTGAATTCTGGATTTTGTCCTACAAGTCTGTGCCATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CCA 90 bp GTGATCTCTCTCTTAACCCCTTTAGGGACAGGAGAGTCATTCCAGAGGACAGATTTGTCGATTCCCTCCTaGCTGTTGAGTGGCTGGATT +
Preference number: 4 (lower is better)
Translates to: VISLLTPLGTGESFQRTDLSIPS*LLSGWI
Trigger: AATCCAGCCACTCAACAGCCAGGAGGGAATCGACAA...ATCTGTCCTCTGGAATGACTCTCCTGTCCCTAAAGGGGTTAAGAGAGAGATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CCA 90 bp AATCTCCTAGCAAAGTCCCCAACTCCTGAGAGGCAGATGGGAAGGGGATGCTTTACACTCAGGGAGCCATaGTCTGCGATTTATCACAAA +
Preference number: 4 (lower is better)
Translates to: NLLAKSPTPERQMGRGCFTLREP*SAIYHK
Trigger: TTTGTGATAAATCGCAGACCATGGCTCCCTGAGTGT...AAAGCATCCCCTTCCCATCTGCCTCTCAGGAGTTGGGGACTTTGCTAGGAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CCA 90 bp CAGAGAAAGAAAATTCAAACTGATGTCTCTAGGCTCTGTAGAGAGCTGTCCGACGCCTCCCTCCTTCTCTaGAGGCAGAATCTTGGAGGT +
Preference number: 4 (lower is better)
Translates to: QRKKIQTDVSRLCRELSDASLLL*RQNLGG
Trigger: ACCTCCAAGATTCTGCCTCCAGAGAAGGAGGGAGGC...GTCGGACAGCTCTCTACAGAGCCTAGAGACATCAGTTTGAATTTTCTTTCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR CCA 90 bp CCTGAATGGGGTTTGACTGGGTCCCGCTACAAACCCCAAGTCAAGCTTAAGTTGGTCTTTATTCTTGAATaGCACTGCTTCCCCTTTCCG +
Preference number: 4 (lower is better)
Translates to: PEWGLTGSRYKPQVKLKLVFILE*HCFPFP
Trigger: CGGAAAGGGGAAGCAGTGCCATTCAAGAATAAAGAC...CAACTTAAGCTTGACTTGGGGTTTGTAGCGGGACCCAGTCAAACCCCATTCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CCA 90 bp ATCCACCGCATTGTTGTTTGTATTGGCATATGGAGTGACCTCACCATCCAACAGTGCCTGCGATGCCCATaGCAAAACCAACATCCGCTT +
Preference number: 4 (lower is better)
Translates to: IHRIVVCIGIWSDLTIQQCLRCP*QNQHPL
Trigger: AAGCGGATGTTGGTTTTGCCATGGGCATCGCAGGCA...CTGTTGGATGGTGAGGTCACTCCATATGCCAATACAAACAACAATGCGGTGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR CCA 90 bp TTCTCAGATCATGCTAGAATGGCTCTTTGGCCTCTCCCAAGGCTTCTGAACACTTGGTATAGTGCTGGCTaGGTGGTGAATGTAGAGGTG +
Preference number: 4 (lower is better)
Translates to: FSDHARMALWPLPRLLNTWYSAG*VVNVEV
Trigger: CACCTCTACATTCACCACCCAGCCAGCACTATACCA...AGTGTTCAGAAGCCTTGGGAGAGGCCAAAGAGCCATTCTAGCATGATCTGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CCA 90 bp TCTTTATGTTTCCTACTGTGGACAGCTCAGGTGAAAGGGGTGAGGGAGGACAGATCGTGGAGGGAACTATaGAACGCTTTGACCACTTTG +
Preference number: 4 (lower is better)
Translates to: SLCFLLWTAQVKGVREDRSWREL*NALTTL
Trigger: CAAAGTGGTCAAAGCGTTCCATAGTTCCCTCCACGA...TCTGTCCTCCCTCACCCCTTTCACCTGAGCTGTCCACAGTAGGAAACATAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp AAATGGCACAGACTTGTAGGACAAAATCCAGAATTCAGGAGAGGAACATCGGGGTTCCTCATCCAGGAGTaGTGTTCGTGGCAACTCCTC +
Preference number: 4 (lower is better)
Translates to: KWHRLVGQNPEFRRGTSGFLIQE*CSWQLL
Trigger: GAGGAGTTGCCACGAACACCACTCCTGGATGAGGAA...CCCCGATGTTCCTCTCCTGAATTCTGGATTTTGTCCTACAAGTCTGTGCCATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CCA 90 bp GGAGAAAACATGAACCAAAGGCCAATTCAGTTATGGGAGCTCATCTCCTTCCATACATCGGGGAGAATGTaGGGTGGGGTGATGCCAAGA +
Preference number: 4 (lower is better)
Translates to: GENMNQRPIQLWELISFHTSGRM*GGVMPR
Trigger: TCTTGGCATCACCCCACCCCACATTCTCCCCGATGT...ATGGAAGGAGATGAGCTCCCATAACTGAATTGGCCTTTGGTTCATGTTTTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp ATCCAGGAGTGGTGTTCGTGGCAACTCCTCCTCTATGGCGAATTCAGGGTGGGTGCAACATATTTCACTTaGGGATATTTGTCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: IQEWCSWQLLLYGEFRVGATYFT*GYLSPS
Trigger: AGAGGGAGACAAATATCCCCAAGTGAAATATGTTGC...ACCCACCCTGAATTCGCCATAGAGGAGGAGTTGCCACGAACACCACTCCTGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR CCA 90 bp ATGCAACCTTCATGGGCAAGGCTGATCTCCCTGGCACTTAAGAACCACATACACAAGAGGAGAGCTTCCTaGATACCGATGACAACTGGA +
Preference number: 4 (lower is better)
Translates to: MQPSWARLISLALKNHIHKRRAS*IPMTTG
Trigger: TCCAGTTGTCATCGGTATCCAGGAAGCTCTCCTCTT...GTGTATGTGGTTCTTAAGTGCCAGGGAGATCAGCCTTGCCCATGAAGGTTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CCA 90 bp CCAAATCAGAGTATCCTTATAGACCAGGAGATATTCGTGTCTTTTATACCACTCAGCAGCTGGAGCATGTaGCTGAAGCGGGGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: PNQSILIDQEIFVSFIPLSSWSM*LKRGWR
Trigger: CCTCCAGCCCCGCTTCAGCCACATGCTCCAGCTGCT...GAGTGGTATAAAAGACACGAATATCTCCTGGTCTATAAGGATACTCTGATTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR CAA 72 bp TGCACTTGGTTGCAATCCACCGCATTGTTGTTTGTATaGGCATATGGAGTGACCTCACCATCCAACAGGAGC +
Preference number: 4 (lower is better)
Translates to: CTWLQSTALLFV*AYGVTSPSNRS
Trigger: GCTCCTGTTGGATGGTGAGGTCACTCCATATGCCAATACAAACAACAATGCGGTGGATTGCAACCAAGTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR TCA 90 bp CTGGCGGATTTTATACATTCCATCTCTACCGCAACATATTTCACTTGGGGATATGACTCCGTGTCACGATaGTTGGTGTCCCCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: LADFIHSISTATYFTWGYDSVSR*LVSPGG
Trigger: ACCACCTGGGGACACCAATCATCGTGACACGGAGTC...ATATCCCCAAGTGAAATATGTTGCGGTAGAGATGGAATGTATAAAATCCGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000357681.10
ENST00000367218.7
CDS-3UTR TCA 90 bp TGGGGGAGCTGCACTTGGTTGCAATCCACCGCATTGTTGTTTGTATTGGCATATTTGAACGCAGCTCCATaGGCTTCCTCAGTTCCATTA +
Preference number: 4 (lower is better)
Translates to: WGSCTWLQSTALLFVLAYLNAAP*ASSVPL
Trigger: TAATGGAACTGAGGAAGCTCATGGAGCTGCGTTCAA...ATATGCCAATACAAACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR TCA 90 bp ACCCCAAAGAGGAGCCCACAAAAGTCTGCTTTGATGGTCTGTCTTGTCCTAGATTTGAACGCAGCTCCATaGGCTTCCTCAGTTCCATTA +
Preference number: 4 (lower is better)
Translates to: TPKRSPQKSALMVCLVLDLNAAP*ASSVPL
Trigger: TAATGGAACTGAGGAAGCTCATGGAGCTGCGTTCAA...ATCTAGGACAAGACAGACCATCAAAGCAGACTTTTGTGGGCTCCTCTTTGGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR TCA 90 bp CCTTGTAAGTCTGTGCTCTTGCCTCTTCATGGTCAGGTAGAGGTTCACTTCACAGGGGTAGTTGCGACTTaGCCACACAGTTCATTTTCT +
Preference number: 4 (lower is better)
Translates to: PCKSVLLPLHGQVEVHFTGVVAT*PHSSFS
Trigger: AGAAAATGAACTGTGTGGTCAAGTCGCAACTACCCC...TGTGAAGTGAACCTCTACCTGACCATGAAGAGGCAAGAGCACAGACTTACAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000357681.10
ENST00000367218.7
CDS-3UTR TCA 90 bp TGCACAGCAGTATTGGTTTCTGTTCATCAGCAAAAAGCTTTATTGGCTCCAACATTCCCTCCTGGCTGTTaGGTGGCTGGATTTCCAGGG +
Preference number: 4 (lower is better)
Translates to: CTAVLVSVHQQKALLAPTFPPGC*VAGFPG
Trigger: CCCTGGAAATCCAGCCACTCAACAGCCAGGAGGGAA...TGTTGGAGCCAATAAAGCTTTTTGCTGATGAACAGAAACCAATACTGCTGTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR TCA 90 bp CCAAAGAGGAGCCCACAAAAGTCTGCTTTGATGGTCTGTCTTGTCCTAGATTTGGTTGCGGTAGATGCCTaGAAAGACGTTCTTCTCTCC +
Preference number: 4 (lower is better)
Translates to: PKRSPQKSALMVCLVLDLVAVDA*KDVLLS
Trigger: GGAGAGAAGAACGTCTTTTCAGGCATCTACCGCAAC...CAAATCTAGGACAAGACAGACCATCAAAGCAGACTTTTGTGGGCTCCTCTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR TCA 90 bp CTGGCGGATTTTATACATTCCATCTCTACCGCAACATATTTCACTTGGGGATATCCTCGGCATCCTTGGTaGTCTCCTCTTTGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: LADFIHSISTATYFTWGYPRHPW*SPLWWC
Trigger: GCACCACCAAAGAGGAGATCACCAAGGATGCCGAGG...ATATCCCCAAGTGAAATATGTTGCGGTAGAGATGGAATGTATAAAATCCGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000357681.10
ENST00000367218.7
CDS-3UTR TCA 90 bp ATCCTAATGACTAGTCAGGAAAGATTCTGTCTATCCATCTGCATGGTGGGGGTTGCCAACTCTCCTCTCTaGAGCTCAAGGGGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: ILMTSQERFCLSICMVGVANSPL*SSRGRR
Trigger: TCTTCTTCCCCTTGAGCTTCAGAGAGGAGAGTTGGC...AACCCCCACCATGCAGATGGATAGACAGAATCTTTCCTGACTAGTCATTAGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR GCA 90 bp ACCCCAAAGAGGAGCCCACAAAAGTCTGCTTTGATGGTCTGTCTTGTCCTAGATGTTCGTCATTTTGCCTaGTGTTACCAAGCCCCTCAA +
Preference number: 4 (lower is better)
Translates to: TPKRSPQKSALMVCLVLDVRHFA*CYQAPQ
Trigger: TTGAGGGGCTTGGTAACAGCAGGCAAAATGACGAAC...ATCTAGGACAAGACAGACCATCAAAGCAGACTTTTGTGGGCTCCTCTTTGGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR GCA 90 bp GAGCCCACAAAAGTCTGCTTTGATGGTCTGTCTTGTCCTAGATTTGGCAGCGTCAATCCAGCCAGCTTGTaGCTCATTTTCATCTTCTGG +
Preference number: 4 (lower is better)
Translates to: EPTKVCFDGLSCPRFGSVNPASL*LIFIFW
Trigger: CCAGAAGATGAAAATGAGGCACAAGCTGGCTGGATT...GACGCTGCCAAATCTAGGACAAGACAGACCATCAAAGCAGACTTTTGTGGGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR GCA 90 bp GGGGAGCTGCACTTGGTTGCAATCCACCGCATTGTTGTTTGTATTGGCATATGGATGATGGAGAACTTTTaGTCCTGTTCAATGCGGCAC +
Preference number: 4 (lower is better)
Translates to: GELHLVAIHRIVVCIGIWMMENF*SCSMRH
Trigger: GTGCCGCATTGAACAGGAGCAAAAGTTCTCCATCAT...CCATATGCCAATACAAACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR GCA 90 bp GAGGAAGTCTCTGCATACTGTGATGGTACCACGGGCTGCTTCAATTGTAAGGCAGGGTCTTTGCTTTGTTaGGATTTTCAGGGACTCCTT +
Preference number: 4 (lower is better)
Translates to: EEVSAYCDGTTGCFNCKAGSLLC*DFQGLL
Trigger: AAGGAGTCCCTGAAAATCGCAACAAAGCAAAGACCC...TGCCTTACAATTGAAGCAGCCCGTGGTACCATCACAGTATGCAGAGACTTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR GCA 90 bp GGGGAGCTGCACTTGGTTGCAATCCACCGCATTGTTGTTTGTATTGGCATATGGTCCGTCTTGGGTCTTTaGTTTGTTGCGATTTTCAGG +
Preference number: 4 (lower is better)
Translates to: GELHLVAIHRIVVCIGIWSVLGL*FVAIFR
Trigger: CCTGAAAATCGCAACAAAGCAAAGACCCAAGACGGA...CCATATGCCAATACAAACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR GCA 90 bp GAGGAAGTCTCTGCATACTGTGATGGTACCACGGGCTGCTTCAATTGTAAGGCATCCGTCTTGGGTCTTTaGTTTGTTGCGATTTTCAGG +
Preference number: 4 (lower is better)
Translates to: EEVSAYCDGTTGCFNCKASVLGL*FVAIFR
Trigger: CCTGAAAATCGCAACAAAGCAAAGACCCAAGACGGA...TGCCTTACAATTGAAGCAGCCCGTGGTACCATCACAGTATGCAGAGACTTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR GCA 90 bp TGTCCAGAGGGATTTCTAGGTGATCTCTCTCTTAACCCCTTTAGGGACAGGAGAGGTTCATGGTCAACGTaGCTGTCTTATCAGAGCAGA +
Preference number: 4 (lower is better)
Translates to: CPEGFLGDLSLNPFRDRRGSWST*LSYQSR
Trigger: TCTGCTCTGATAAGACAGGCACGTTGACCATGAACC...TCTCCTGTCCCTAAAGGGGTTAAGAGAGAGATCACCTAGAAATCCCTCTGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR GCA 90 bp CACAGACTTGTAGGACAAAATCCAGAATTCAGGAGAGGAACATCGGGGAGAATGATTCTTGAATGGCACTaGTTCCCCTTTCCGGTCCAG +
Preference number: 4 (lower is better)
Translates to: HRLVGQNPEFRRGTSGRMILEWH*FPFPVQ
Trigger: CTGGACCGGAAAGGGGAAGCAGTGCCATTCAAGAAT...CATTCTCCCCGATGTTCCTCTCCTGAATTCTGGATTTTGTCCTACAAGTCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000357681.10
ENST00000367218.7
CDS-3UTR GCA 90 bp ATCCACCGCATTGTTGTTTGTATTGGCATATGGAGTGACCTCACCATCCAACAGCCTTTCACCAGGGTGTaGTTGTCAGTGGGAGAAGAT +
Preference number: 4 (lower is better)
Translates to: IHRIVVCIGIWSDLTIQQPFTRV*LSVGED
Trigger: ATCTTCTCCCACTGACAAGCACACCCTGGTGAAAGG...CTGTTGGATGGTGAGGTCACTCCATATGCCAATACAAACAACAATGCGGTGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR GCA 90 bp CACAGACTTGTAGGACAAAATCCAGAATTCAGGAGAGGAACATCGGGGAGAATGCCTTTCACCAGGGTGTaGTTGTCAGTGGGAGAAGAT +
Preference number: 4 (lower is better)
Translates to: HRLVGQNPEFRRGTSGRMPFTRV*LSVGED
Trigger: ATCTTCTCCCACTGACAAGCACACCCTGGTGAAAGG...CATTCTCCCCGATGTTCCTCTCCTGAATTCTGGATTTTGTCCTACAAGTCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000357681.10
ENST00000367218.7
CDS-3UTR GCA 90 bp TCTTTATGTTTCCTACTGTGGACAGCTCAGGTGAAAGGGGTGAGGGAGGACAGAGGTGTTCCCCAACAGTaGTGTCAATTATGCCTTTCA +
Preference number: 4 (lower is better)
Translates to: SLCFLLWTAQVKGVREDRGVPQQ*CQLCLS
Trigger: TGAAAGGCATAATTGACAGCACTGTTGGGGAACACC...TCTGTCCTCCCTCACCCCTTTCACCTGAGCTGTCCACAGTAGGAAACATAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR GCA 90 bp TTGGTTAAAGTGGATGCCACGTGCTCTCTTGTGGTCATTTTAGCAAATCATGCAGGATCGGGTAGGTATTaGGGAGATGAACTGGCCCCA +
Preference number: 4 (lower is better)
Translates to: LVKVDATCSLVVILANHAGSGRY*GDELAP
Trigger: TGGGGCCAGTTCATCTCCGCAATACCTACCCGATCC...TGCATGATTTGCTAAAATGACCACAAGAGAGCACGTGGCATCCACTTTAACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356729.5
CDS-3UTR GCA 90 bp TTGGTTAAAGTGGATGCCACGTGCTCTCTTGTGGTCATTTTAGCAAATCATGCATCTTTGGTGGTGCCATaGCCAGCCTCCTTCAGGAAC +
Preference number: 4 (lower is better)
Translates to: LVKVDATCSLVVILANHASLVVP*PASFRN
Trigger: GTTCCTGAAGGAGGCTGGGCATGGCACCACCAAAGA...TGCATGATTTGCTAAAATGACCACAAGAGAGCACGTGGCATCCACTTTAACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356729.5
CDS-3UTR GCA 90 bp TTGGTTAAAGTGGATGCCACGTGCTCTCTTGTGGTCATTTTAGCAAATCATGCATCTCCTCTTTGGTGGTaGCATGCCCAGCCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: LVKVDATCSLVVILANHASPLWW*HAQPPS
Trigger: TGAAGGAGGCTGGGCATGGCACCACCAAAGAGGAGA...TGCATGATTTGCTAAAATGACCACAAGAGAGCACGTGGCATCCACTTTAACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356729.5
CDS-3UTR GCA 90 bp GGGGAGCTGCACTTGGTTGCAATCCACCGCATTGTTGTTTGTATTGGCATATGGGAGCCCACAAAAGTCTaGTTTGATGGTCTGTCTTGT +
Preference number: 4 (lower is better)
Translates to: GELHLVAIHRIVVCIGIWEPTKV*FDGLSC
Trigger: ACAAGACAGACCATCAAAGCAGACTTTTGTGGGCTC...CCATATGCCAATACAAACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367218.7
CDS-3UTR GCA 90 bp GAGCCCACAAAAGTCTGCTTTGATGGTCTGTCTTGTCCTAGATTTGGCAGCGTCAAGGTTTCTGGCCTCTaGAGGAAGGTTTTCTCAGAT +
Preference number: 4 (lower is better)
Translates to: EPTKVCFDGLSCPRFGSVKVSGL*RKVFSD
Trigger: ATCTGAGAAAACCTTCCTGCAGAGGCCAGAAACCTT...GACGCTGCCAAATCTAGGACAAGACAGACCATCAAAGCAGACTTTTGTGGGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR GCA 90 bp AAATGGCACAGACTTGTAGGACAAAATCCAGAATTCAGGAGAGGAACATCGGGGAAACAGCTGGTTATGTaGTCCCTTCCACAGGGCTAC +
Preference number: 4 (lower is better)
Translates to: KWHRLVGQNPEFRRGTSGKQLVM*SLPQGY
Trigger: GTAGCCCTGTGGAAGGGAGCACATAACCAGCTGTTT...CCCCGATGTTCCTCTCCTGAATTCTGGATTTTGTCCTACAAGTCTGTGCCATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR GCA 90 bp GCTCATCTCCTTCCATCTCTCCTAATCAAGAGCAAAGGGAACAGCAGGCCTAACCTAAGTCACCTGTCATaGCAAACAGCTGGTTATGTG +
Preference number: 4 (lower is better)
Translates to: AHLLPSLLIKSKGNSRPNLSHLS*QTAGYV
Trigger: CACATAACCAGCTGTTTGGCATGACAGGTGACTTAG...GTTAGGCCTGCTGTTCCCTTTGCTCTTGATTAGGAGAGATGGAAGGAGATGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR GCA 90 bp GTGATCTCTCTCTTAACCCCTTTAGGGACAGGAGAGTCATTCCAGAGGACAGATGATGGTACCACGGGCTaGTTCAATTGTAAGGCAAAG +
Preference number: 4 (lower is better)
Translates to: VISLLTPLGTGESFQRTDDGTTG*FNCKAK
Trigger: CTTTGCCTTACAATTGAAGCAGCCCGTGGTACCATC...ATCTGTCCTCTGGAATGACTCTCCTGTCCCTAAAGGGGTTAAGAGAGAGATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR GCA 90 bp CCTTGTAAGTCTGTGCTCTTGCCTCTTCATGGTCAGGTAGAGGTTCACTTCACAGATGGTACCACGGGCTaGTTCAATTGTAAGGCAAAG +
Preference number: 4 (lower is better)
Translates to: PCKSVLLPLHGQVEVHFTDGTTG*FNCKAK
Trigger: CTTTGCCTTACAATTGAAGCAGCCCGTGGTACCATC...TGTGAAGTGAACCTCTACCTGACCATGAAGAGGCAAGAGCACAGACTTACAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR GCA 90 bp TTCTCAGATCATGCTAGAATGGCTCTTTGGCCTCTCCCAAGGCTTCTGAACACTGCAGGCATTTATAAGTaGCCACCCTCACCAATGCAT +
Preference number: 4 (lower is better)
Translates to: FSDHARMALWPLPRLLNTAGIYK*PPSPMH
Trigger: ATGCATTGGTGAGGGTGGGCACTTATAAATGCCTGC...AGTGTTCAGAAGCCTTGGGAGAGGCCAAAGAGCCATTCTAGCATGATCTGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp TACCACTCTGCCAGCTATTCTTCAAGAAACACAAATCCAACAGAGGCCCCTGATAGCTCCATCTCAGCATaGTCAATCTCATCCAGTCCC +
Preference number: 4 (lower is better)
Translates to: YHSASYSSRNTNPTEAPDSSISA*SISSSP
Trigger: GGGACTGGATGAGATTGACCATGCTGAGATGGAGCT...ATCAGGGGCCTCTGTTGGATTTGTGTTTCTTGAAGAATAGCTGGCAGAGTGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp CCTTGTAAGTCTGTGCTCTTGCCTCTTCATGGTCAGGTAGAGGTTCACTTCACAGGGGGAAGATTTGACTaGTGCAACTGCTACATAGGA +
Preference number: 4 (lower is better)
Translates to: PCKSVLLPLHGQVEVHFTGGRFD*CNCYIG
Trigger: TCCTATGTAGCAGTTGCACCAGTCAAATCTTCCCCC...TGTGAAGTGAACCTCTACCTGACCATGAAGAGGCAAGAGCACAGACTTACAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp ACCCCAAAGAGGAGCCCACAAAAGTCTGCTTTGATGGTCTGTCTTGTCCTAGATTCGTGGAGGGAACTATaGAACGCTTTGACCACTTTG +
Preference number: 4 (lower is better)
Translates to: TPKRSPQKSALMVCLVLDSWREL*NALTTL
Trigger: CAAAGTGGTCAAAGCGTTCCATAGTTCCCTCCACGA...ATCTAGGACAAGACAGACCATCAAAGCAGACTTTTGTGGGCTCCTCTTTGGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp GAGCTGCACTTGGTTGCAATCCACCGCATTGTTGTTTGTATTGGCGAATTCAGGTCGTGGAGGGAACTATaGAACGCTTTGACCACTTTG +
Preference number: 4 (lower is better)
Translates to: ELHLVAIHRIVVCIGEFRSWREL*NALTTL
Trigger: CAAAGTGGTCAAAGCGTTCCATAGTTCCCTCCACGA...CCTGAATTCGCCAATACAAACAACAATGCGGTGGATTGCAACCAAGTGCAGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484746.1
CDS-3UTR CCA 90 bp CACAGACTTGTAGGACAAAATCCAGAATTCAGGAGAGGAACATCGGGGAGAATGATGGCGAATTCAGGGTaGGTCATGAAGCTGTGGATG +
Preference number: 4 (lower is better)
Translates to: HRLVGQNPEFRRGTSGRMMANSG*VMKLWM
Trigger: CATCCACAGCTTCATGACCCACCCTGAATTCGCCAT...CATTCTCCCCGATGTTCCTCTCCTGAATTCTGGATTTTGTCCTACAAGTCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CCA 90 bp GAAGCTGTGGATGGACTTTTGGTTGTAGGGTTTCTGAATGCTTTCGTGGAGGGAGCTCTTGCCTCTTCATaGTCAGGTAGAGGTTCACTT +
Preference number: 4 (lower is better)
Translates to: EAVDGLLVVGFLNAFVEGALASS*SGRGSL
Trigger: AAGTGAACCTCTACCTGACCATGAAGAGGCAAGAGC...TCCCTCCACGAAAGCATTCAGAAACCCTACAACCAAAAGTCCATCCACAGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp GCAAAAATTAGAATCAGAAACTGGAGAGAATGTCGAAGCTGGTCCCCAGGCACCGCTCTTGCCTCTTCATaGTCAGGTAGAGGTTCACTT +
Preference number: 4 (lower is better)
Translates to: AKIRIRNWRECRSWSPGTALASS*SGRGSL
Trigger: AAGTGAACCTCTACCTGACCATGAAGAGGCAAGAGC...GGTGCCTGGGGACCAGCTTCGACATTCTCTCCAGTTTCTGATTCTAATTTTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp CCTGAATGGGGTTTGACTGGGTCCCGCTACAAACCCCAAGTCAAGCTTAAGTTGAATCAAGGGTTCTTTTaGGCCAAAAGGGAGAAGGAT +
Preference number: 4 (lower is better)
Translates to: PEWGLTGSRYKPQVKLKLNQGFF*AKREKD
Trigger: ATCCTTCTCCCTTTTGGCCCAAAAGAACCCTTGATT...CAACTTAAGCTTGACTTGGGGTTTGTAGCGGGACCCAGTCAAACCCCATTCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp AAATGGCACAGACTTGTAGGACAAAATCCAGAATTCAGGAGAGGAACATCGGGGCATATGCAACCTTCATaGGCAAGGCTGATCTCCCTG +
Preference number: 4 (lower is better)
Translates to: KWHRLVGQNPEFRRGTSGHMQPS*ARLISL
Trigger: CAGGGAGATCAGCCTTGCCCATGAAGGTTGCATATG...CCCCGATGTTCCTCTCCTGAATTCTGGATTTTGTCCTACAAGTCTGTGCCATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp GGCTGGAATGGCTTAACAATAGCAGGCATTTATAAGTGCCCACCCTCACCAATGGACCTTCTCAGAGACTaGAAAAGTTGTGACACGTGG +
Preference number: 4 (lower is better)
Translates to: GWNGLTIAGIYKCPPSPMDLLRD*KSCDTW
Trigger: CCACGTGTCACAACTTTTCCAGTCTCTGAGAAGGTC...CATTGGTGAGGGTGGGCACTTATAAATGCCTGCTATTGTTAAGCCATTCCAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp GAGGAAGTCTCTGCATACTGTGATGGTACCACGGGCTGCTTCAATTGTAAGGCAATATTTGAGAAAGGCTaGGACCTTCTCAGAGACTGG +
Preference number: 4 (lower is better)
Translates to: EEVSAYCDGTTGCFNCKAIFEKG*DLLRDW
Trigger: CCAGTCTCTGAGAAGGTCCCAGCCTTTCTCAAATAT...TGCCTTACAATTGAAGCAGCCCGTGGTACCATCACAGTATGCAGAGACTTCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp CTGGCGGATTTTATACATTCCATCTCTACCGCAACATATTTCACTTGGGGATATTTACTGGGCAGCAGCTaGAGCATGTGGCTGAAGCGG +
Preference number: 4 (lower is better)
Translates to: LADFIHSISTATYFTWGYLLGSS*SMWLKR
Trigger: CCGCTTCAGCCACATGCTCCAGCTGCTGCCCAGTAA...ATATCCCCAAGTGAAATATGTTGCGGTAGAGATGGAATGTATAAAATCCGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp GAGGAAGTCTCTGCATACTGTGATGGTACCACGGGCTGCTTCAATTGTAAGGCAAGGCCAATTCAGTTATaGGAGCTCATCTCCTTCCAT +
Preference number: 4 (lower is better)
Translates to: EEVSAYCDGTTGCFNCKARPIQL*ELISFH
Trigger: ATGGAAGGAGATGAGCTCCCATAACTGAATTGGCCT...TGCCTTACAATTGAAGCAGCCCGTGGTACCATCACAGTATGCAGAGACTTCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp ATGGCTTTGAAAGCAGTGGTCACCCCAAAGAGGAGCCCACAAAAGTCTGCTTTGCAACACACACTGGACTaGGGTATACGTTGCTTTGAT +
Preference number: 4 (lower is better)
Translates to: MALKAVVTPKRSPQKSALQHTLD*GIRCFD
Trigger: ATCAAAGCAACGTATACCCCAGTCCAGTGTGTGTTG...CAAAGCAGACTTTTGTGGGCTCCTCTTTGGGGTGACCACTGCTTTCAAAGCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp GCAAAAATTAGAATCAGAAACTGGAGAGAATGTCGAAGCTGGTCCCCAGGCACCTATGGCAACACACACTaGACTGGGGTATACGTTGCT +
Preference number: 4 (lower is better)
Translates to: AKIRIRNWRECRSWSPGTYGNTH*TGVYVA
Trigger: AGCAACGTATACCCCAGTCCAGTGTGTGTTGCCATA...GGTGCCTGGGGACCAGCTTCGACATTCTCTCCAGTTTCTGATTCTAATTTTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp CATACTGTGATGGTACCACGGGCTGCTTCAATTGTAAGGCAAAGGAAGCAGGAATATGGCAACACACACTaGACTGGGGTATACGTTGCT +
Preference number: 4 (lower is better)
Translates to: HTVMVPRAASIVRQRKQEYGNTH*TGVYVA
Trigger: AGCAACGTATACCCCAGTCCAGTGTGTGTTGCCATA...TTCCTGCTTCCTTTGCCTTACAATTGAAGCAGCCCGTGGTACCATCACAGTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp CTAGCAAAGTCCCCAACTCCTGAGAGGCAGATGGGAAGGGGATGCTTTGGGCAGTTCTTCTGGTCTCAGTaGAACAACACATTTGAATTT +
Preference number: 4 (lower is better)
Translates to: LAKSPTPERQMGRGCFGQFFWSQ*NNTFEF
Trigger: AAATTCAAATGTGTTGTTCCACTGAGACCAGAAGAA...CTGCCCAAAGCATCCCCTTCCCATCTGCCTCTCAGGAGTTGGGGACTTTGCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR TCA 90 bp AGTGAAAGGGCGTCTGGTCTATTCAGAGGAAGAGGCTGGAATGGCTTAACAATAGGGGTAGTTGCGACTTaGCCACACAGTTCATTTTCT +
Preference number: 4 (lower is better)
Translates to: SERASGLFRGRGWNGLTIGVVAT*PHSSFS
Trigger: AGAAAATGAACTGTGTGGTCAAGTCGCAACTACCCC...TATTGTTAAGCCATTCCAGCCTCTTCCTCTGAATAGACCAGACGCCCTTTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR TCA 90 bp CACAGACTTGTAGGACAAAATCCAGAATTCAGGAGAGGAACATCGGGGAGAATGGTTGACCGTTTCGGATaGTGGAGAACTTTTGCTCCT +
Preference number: 4 (lower is better)
Translates to: HRLVGQNPEFRRGTSGRMVDRFG*WRTFAP
Trigger: AGGAGCAAAAGTTCTCCATCATCCGAAACGGTCAAC...CATTCTCCCCGATGTTCCTCTCCTGAATTCTGGATTTTGTCCTACAAGTCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000357681.10
ENST00000367218.7
CDS-3UTR TCA 90 bp AGTGAAAGGGCGTCTGGTCTATTCAGAGGAAGAGGCTGGAATGGCTTAACAATAGTTGACCGTTTCGGATaGTGGAGAACTTTTGCTCCT +
Preference number: 4 (lower is better)
Translates to: SERASGLFRGRGWNGLTIVDRFG*WRTFAP
Trigger: AGGAGCAAAAGTTCTCCATCATCCGAAACGGTCAAC...TATTGTTAAGCCATTCCAGCCTCTTCCTCTGAATAGACCAGACGCCCTTTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR TCA 90 bp TCTGGAACTAAATCAAGGGTTCTTTTGGGCCAAAAGGGAGAAGGATCTAAGTTTGGGAGCTGGATGAGTTaGCCGTTTCGGATGATGGAG +
Preference number: 4 (lower is better)
Translates to: SGTKSRVLLGQKGEGSKFGSWMS*PFRMME
Trigger: CTCCATCATCCGAAACGGTCAACTCATCCAGCTCCC...AAACTTAGATCCTTCTCCCTTTTGGCCCAAAAGAACCCTTGATTTAGTTCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR TCA 90 bp GCAAAAATTAGAATCAGAAACTGGAGAGAATGTCGAAGCTGGTCCCCAGGCACCCTCTGTCTTTATTCTTaGATGGCACTGCTTCCCCTT +
Preference number: 4 (lower is better)
Translates to: AKIRIRNWRECRSWSPGTLCLYS*MALLPL
Trigger: AAGGGGAAGCAGTGCCATTCAAGAATAAAGACAGAG...GGTGCCTGGGGACCAGCTTCGACATTCTCTCCAGTTTCTGATTCTAATTTTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR TCA 90 bp GAAGCTGTGGATGGACTTTTGGTTGTAGGGTTTCTGAATGCTTTCGTGGAGGGATGTCATCTGTTAGGATaGTGTCTGAAGCCTCCTTTG +
Preference number: 4 (lower is better)
Translates to: EAVDGLLVVGFLNAFVEGCHLLG*CLKPPL
Trigger: CAAAGGAGGCTTCAGACATCATCCTAACAGATGACA...TCCCTCCACGAAAGCATTCAGAAACCCTACAACCAAAAGTCCATCCACAGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR TCA 90 bp AATCTCCTAGCAAAGTCCCCAACTCCTGAGAGGCAGATGGGAAGGGGATGCTTTATATTTGTCTCCCTCTaGACCCTCAACTTAGCTTAT +
Preference number: 4 (lower is better)
Translates to: NLLAKSPTPERQMGRGCFIFVSL*TLNLAY
Trigger: ATAAGCTAAGTTGAGGGTTCAGAGGGAGACAAATAT...AAAGCATCCCCTTCCCATCTGCCTCTCAGGAGTTGGGGACTTTGCTAGGAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR TCA 90 bp TGGGGGAGCTGCACTTGGTTGCAATCCACCGCATTGTTGTTTGTATTGGCATATCCTAGATATGAAAGGTaGGGAAGTCTCTGCATACTG +
Preference number: 4 (lower is better)
Translates to: WGSCTWLQSTALLFVLAYPRYER*GSLCIL
Trigger: CAGTATGCAGAGACTTCCTCACCTTTCATATCTAGG...ATATGCCAATACAAACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367218.7
CDS-3UTR GCA 90 bp GACCTCACCATCCAACAGGAGCACCCTAGTCCCAAACTTAGAAGCCTTGTCAGGATTGAATATATCTTGTaGAATAAGCTCCCGAGTAGC +
Preference number: 4 (lower is better)
Translates to: DLTIQQEHPSPKLRSLVRIEYIL*NKLPSS
Trigger: GCTACTCGGGAGCTTATTGCACAAGATATATTCAAT...CCTGACAAGGCTTCTAAGTTTGGGACTAGGGTGCTCCTGTTGGATGGTGAGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR GCA 90 bp CACAGACTTGTAGGACAAAATCCAGAATTCAGGAGAGGAACATCGGGGAGAATGGTTCGTCATTTTGCCTaGTGTTACCAAGCCCCTCAA +
Preference number: 4 (lower is better)
Translates to: HRLVGQNPEFRRGTSGRMVRHFA*CYQAPQ
Trigger: TTGAGGGGCTTGGTAACAGCAGGCAAAATGACGAAC...CATTCTCCCCGATGTTCCTCTCCTGAATTCTGGATTTTGTCCTACAAGTCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000357681.10
ENST00000367218.7
CDS-3UTR GCA 90 bp TTGTTGTTTGTATTGGCATATGGAGTGACCTCACCATCCAACAGGAGCACCCTATCAGTTCCATTACTGTaGAGCCAAAGTCCCCTTCAC +
Preference number: 4 (lower is better)
Translates to: LLFVLAYGVTSPSNRSTLSVPLL*SQSPLH
Trigger: GTGAAGGGGACTTTGGCTGCACAGTAATGGAACTGA...TAGGGTGCTCCTGTTGGATGGTGAGGTCACTCCATATGCCAATACAAACAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR GCA 90 bp TTCTTTATGTTTCCTACTGTGGACAGCTCAGGTGAAAGGGGTGAGGGAGGACAGAGGTTTTCAGTCTACTaGAGAGATTCTGTACACCTC +
Preference number: 4 (lower is better)
Translates to: FFMFPTVDSSGERGEGGQRFSVY*RDSVHL
Trigger: GAGGTGTACAGAATCTCTGCAGTAGACTGAAAACCT...CTGTCCTCCCTCACCCCTTTCACCTGAGCTGTCCACAGTAGGAAACATAAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR GCA 90 bp GTGATCTCTCTCTTAACCCCTTTAGGGACAGGAGAGTCATTCCAGAGGACAGATATGATGGAGAACTTTTaGTCCTGTTCAATGCGGCAC +
Preference number: 4 (lower is better)
Translates to: VISLLTPLGTGESFQRTDMMENF*SCSMRH
Trigger: GTGCCGCATTGAACAGGAGCAAAAGTTCTCCATCAT...ATCTGTCCTCTGGAATGACTCTCCTGTCCCTAAAGGGGTTAAGAGAGAGATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR GCA 90 bp CAGAGAAAGAAAATTCAAACTGATGTCTCTAGGCTCTGTAGAGAGCTGTCCGACGATCAGGATTCCATCTaGAGGCAGCAGATCACCGTA +
Preference number: 4 (lower is better)
Translates to: QRKKIQTDVSRLCRELSDDQDSI*RQQITV
Trigger: TACGGTGATCTGCTGCCTGCAGATGGAATCCTGATC...GTCGGACAGCTCTCTACAGAGCCTAGAGACATCAGTTTGAATTTTCTTTCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR GCA 90 bp CATACTGTGATGGTACCACGGGCTGCTTCAATTGTAAGGCAAAGGAAGCAGGAAGGGTCTTTGCTTTGTTaGGATTTTCAGGGACTCCTT +
Preference number: 4 (lower is better)
Translates to: HTVMVPRAASIVRQRKQEGSLLC*DFQGLL
Trigger: AAGGAGTCCCTGAAAATCGCAACAAAGCAAAGACCC...TTCCTGCTTCCTTTGCCTTACAATTGAAGCAGCCCGTGGTACCATCACAGTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR GCA 90 bp ATCCAACAGGAGCACCCTAGTCCCAAACTTAGAAGCCTTGTCAGGATTTTCCTCTTTAGGCACCTTGACTaGCTTCTTGTCCTTTTCCTC +
Preference number: 4 (lower is better)
Translates to: IQQEHPSPKLRSLVRIFLFRHLD*LLVLFL
Trigger: GAGGAAAAGGACAAGAAGGCAGTCAAGGTGCCTAAA...GAGGAAAATCCTGACAAGGCTTCTAAGTTTGGGACTAGGGTGCTCCTGTTGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR GCA 90 bp TTCTCAGATCATGCTAGAATGGCTCTTTGGCCTCTCCCAAGGCTTCTGAACACTTTTAGGCACCTTGACTaGCTTCTTGTCCTTTTCCTC +
Preference number: 4 (lower is better)
Translates to: FSDHARMALWPLPRLLNTFRHLD*LLVLFL
Trigger: GAGGAAAAGGACAAGAAGGCAGTCAAGGTGCCTAAA...AGTGTTCAGAAGCCTTGGGAGAGGCCAAAGAGCCATTCTAGCATGATCTGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR GCA 90 bp CCTTGTAAGTCTGTGCTCTTGCCTCTTCATGGTCAGGTAGAGGTTCACTTCACACAGGGAGCCATGGTCTaGGATTTATCACAAAGTTGT +
Preference number: 4 (lower is better)
Translates to: PCKSVLLPLHGQVEVHFTQGAMV*DLSQSC
Trigger: ACAACTTTGTGATAAATCGCAGACCATGGCTCCCTG...TGTGAAGTGAACCTCTACCTGACCATGAAGAGGCAAGAGCACAGACTTACAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000357681.10
ENST00000367218.7
CDS-3UTR GCA 90 bp GCAAAAATTAGAATCAGAAACTGGAGAGAATGTCGAAGCTGGTCCCCAGGCACCCAGGGAGCCATGGTCTaGGATTTATCACAAAGTTGT +
Preference number: 4 (lower is better)
Translates to: AKIRIRNWRECRSWSPGTQGAMV*DLSQSC
Trigger: ACAACTTTGTGATAAATCGCAGACCATGGCTCCCTG...GGTGCCTGGGGACCAGCTTCGACATTCTCTCCAGTTTCTGATTCTAATTTTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR GCA 90 bp TTCTCAGATCATGCTAGAATGGCTCTTTGGCCTCTCCCAAGGCTTCTGAACACTCAGGGAGCCATGGTCTaGGATTTATCACAAAGTTGT +
Preference number: 4 (lower is better)
Translates to: FSDHARMALWPLPRLLNTQGAMV*DLSQSC
Trigger: ACAACTTTGTGATAAATCGCAGACCATGGCTCCCTG...AGTGTTCAGAAGCCTTGGGAGAGGCCAAAGAGCCATTCTAGCATGATCTGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR GCA 90 bp GGAGAAAACATGAACCAAAGGCCAATTCAGTTATGGGAGCTCATCTCCTTCCATATTCTTGAATGGCACTaGTTCCCCTTTCCGGTCCAG +
Preference number: 4 (lower is better)
Translates to: GENMNQRPIQLWELISFHILEWH*FPFPVQ
Trigger: CTGGACCGGAAAGGGGAAGCAGTGCCATTCAAGAAT...ATGGAAGGAGATGAGCTCCCATAACTGAATTGGCCTTTGGTTCATGTTTTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR GCA 90 bp CACAGACTTGTAGGACAAAATCCAGAATTCAGGAGAGGAACATCGGGGAGAATGTTGTCCAGCTTTTCTTaGTCTACCTCGCCTTTCTCG +
Preference number: 4 (lower is better)
Translates to: HRLVGQNPEFRRGTSGRMLSSFS*STSPFS
Trigger: CGAGAAAGGCGAGGTAGAGCAAGAAAAGCTGGACAA...CATTCTCCCCGATGTTCCTCTCCTGAATTCTGGATTTTGTCCTACAAGTCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000357681.10
ENST00000367218.7
CDS-3UTR GCA 90 bp AAATGGCACAGACTTGTAGGACAAAATCCAGAATTCAGGAGAGGAACATCGGGGTTGTCCAGCTTTTCTTaGTCTACCTCGCCTTTCTCG +
Preference number: 4 (lower is better)
Translates to: KWHRLVGQNPEFRRGTSGLSSFS*STSPFS
Trigger: CGAGAAAGGCGAGGTAGAGCAAGAAAAGCTGGACAA...CCCCGATGTTCCTCTCCTGAATTCTGGATTTTGTCCTACAAGTCTGTGCCATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000357681.10
ENST00000367218.7
CDS-3UTR GCA 90 bp CACAGACTTGTAGGACAAAATCCAGAATTCAGGAGAGGAACATCGGGGAGAATGCAGTGCTGTCAATTATaGCTTTCACCAGGGTGTGCT +
Preference number: 4 (lower is better)
Translates to: HRLVGQNPEFRRGTSGRMQCCQL*LSPGCA
Trigger: AGCACACCCTGGTGAAAGGCATAATTGACAGCACTG...CATTCTCCCCGATGTTCCTCTCCTGAATTCTGGATTTTGTCCTACAAGTCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000357681.10
ENST00000367218.7
CDS-3UTR GCA 90 bp GAGCCCACAAAAGTCTGCTTTGATGGTCTGTCTTGTCCTAGATTTGGCAGCGTCTGTAGGGTTTCTGAATaGTTTCGTGGAGGGAACTAT +
Preference number: 4 (lower is better)
Translates to: EPTKVCFDGLSCPRFGSVCRVSE*FRGGNY
Trigger: ATAGTTCCCTCCACGAAAGCATTCAGAAACCCTACA...GACGCTGCCAAATCTAGGACAAGACAGACCATCAAAGCAGACTTTTGTGGGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR GCA 90 bp AAAAGTTGTGACACGTGGCAAAAATTAGAATCAGAAACTGGAGAGAATGTCGAATCTTCGGAGGGATGGTaGCCCACGAAGTTCGTGCCC +
Preference number: 4 (lower is better)
Translates to: KSCDTWQKLESETGENVESSEGW*PTKFVP
Trigger: GGGCACGAACTTCGTGGGGCACCATCCCTCCGAAGA...TTCGACATTCTCTCCAGTTTCTGATTCTAATTTTTGCCACGTGTCACAACTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR GCA 90 bp CATACTGTGATGGTACCACGGGCTGCTTCAATTGTAAGGCAAAGGAAGCAGGAAGAGCCCACAAAAGTCTaGTTTGATGGTCTGTCTTGT +
Preference number: 4 (lower is better)
Translates to: HTVMVPRAASIVRQRKQEEPTKV*FDGLSC
Trigger: ACAAGACAGACCATCAAAGCAGACTTTTGTGGGCTC...TTCCTGCTTCCTTTGCCTTACAATTGAAGCAGCCCGTGGTACCATCACAGTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR GCA 90 bp CCTTGTAAGTCTGTGCTCTTGCCTCTTCATGGTCAGGTAGAGGTTCACTTCACAAAGGTTTCTGGCCTCTaGAGGAAGGTTTTCTCAGAT +
Preference number: 4 (lower is better)
Translates to: PCKSVLLPLHGQVEVHFTKVSGL*RKVFSD
Trigger: ATCTGAGAAAACCTTCCTGCAGAGGCCAGAAACCTT...TGTGAAGTGAACCTCTACCTGACCATGAAGAGGCAAGAGCACAGACTTACAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR GCA 90 bp CATACTGTGATGGTACCACGGGCTGCTTCAATTGTAAGGCAAAGGAAGCAGGAAAAGGTTTCTGGCCTCTaGAGGAAGGTTTTCTCAGAT +
Preference number: 4 (lower is better)
Translates to: HTVMVPRAASIVRQRKQEKVSGL*RKVFSD
Trigger: ATCTGAGAAAACCTTCCTGCAGAGGCCAGAAACCTT...TTCCTGCTTCCTTTGCCTTACAATTGAAGCAGCCCGTGGTACCATCACAGTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR GCA 90 bp GAGCTGTCCGACTGGGGGAGCTGCACTTGGTTGCAATCCACCGCATTGTTGTTTTCTTTTATACCACTCTaGCAGCTATTCTTCAAGAAA +
Preference number: 4 (lower is better)
Translates to: ELSDWGSCTWLQSTALLFSFIPL*QLFFKK
Trigger: TTTCTTGAAGAATAGCTGGCAGAGTGGTATAAAAGA...AAACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCCCCAGTCGGACAGCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367218.7
ENST00000484746.1
CDS-3UTR GCA 90 bp CACAGACTTGTAGGACAAAATCCAGAATTCAGGAGAGGAACATCGGGGAGAATGGATGGTACCACGGGCTaGTTCAATTGTAAGGCAAAG +
Preference number: 4 (lower is better)
Translates to: HRLVGQNPEFRRGTSGRMDGTTG*FNCKAK
Trigger: CTTTGCCTTACAATTGAAGCAGCCCGTGGTACCATC...CATTCTCCCCGATGTTCCTCTCCTGAATTCTGGATTTTGTCCTACAAGTCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp CTGGCGGATTTTATACATTCCATCTCTACCGCAACATATTTCACTTGGGGATATGATGGGGGAACTGAGTaGAAGGTGGACTCCGTGTCA +
Preference number: 4 (lower is better)
Translates to: LADFIHSISTATYFTWGYDGGTE*KVDSVS
Trigger: TGACACGGAGTCCACCTTCCACTCAGTTCCCCCATC...ATATCCCCAAGTGAAATATGTTGCGGTAGAGATGGAATGTATAAAATCCGCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CCA 90 bp CAGAGAAAGAAAATTCAAACTGATGTCTCTAGGCTCTGTAGAGAGCTGTCCGACGAACCTTCCATGACATaGGTCCCTGAGAGCAACATG +
Preference number: 4 (lower is better)
Translates to: QRKKIQTDVSRLCRELSDEPSMT*VPESNM
Trigger: CATGTTGCTCTCAGGGACCCATGTCATGGAAGGTTC...GTCGGACAGCTCTCTACAGAGCCTAGAGACATCAGTTTGAATTTTCTTTCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR CCA 90 bp GGCAGGGTCATACCCAGTTCATTCTTTTGCCACCACTTTAGGAATAAGAGAAAGTTGTCGATTCCCTCCTaGCTGTTGAGTGGCTGGATT +
Preference number: 4 (lower is better)
Translates to: GRVIPSSFFCHHFRNKRKLSIPS*LLSGWI
Trigger: AATCCAGCCACTCAACAGCCAGGAGGGAATCGACAA...CTTTCTCTTATTCCTAAAGTGGTGGCAAAAGAATGAACTGGGTATGACCCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CCA 90 bp ATCCAACAGGAGCACCCTAGTCCCAAACTTAGAAGCCTTGTCAGGATTTTCCTCGAAGACATCAGGGCTTaGGATTTGACGGTAATGGAT +
Preference number: 4 (lower is better)
Translates to: IQQEHPSPKLRSLVRIFLEDIRA*DLTVMD
Trigger: ATCCATTACCGTCAAATCCCAAGCCCTGATGTCTTC...GAGGAAAATCCTGACAAGGCTTCTAAGTTTGGGACTAGGGTGCTCCTGTTGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR CCA 90 bp CCTTGTAAGTCTGTGCTCTTGCCTCTTCATGGTCAGGTAGAGGTTCACTTCACAGAAGACATCAGGGCTTaGGATTTGACGGTAATGGAT +
Preference number: 4 (lower is better)
Translates to: PCKSVLLPLHGQVEVHFTEDIRA*DLTVMD
Trigger: ATCCATTACCGTCAAATCCCAAGCCCTGATGTCTTC...TGTGAAGTGAACCTCTACCTGACCATGAAGAGGCAAGAGCACAGACTTACAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CCA 90 bp GTGATCTCTCTCTTAACCCCTTTAGGGACAGGAGAGTCATTCCAGAGGACAGATGTCTTTATTCTTGAATaGCACTGCTTCCCCTTTCCG +
Preference number: 4 (lower is better)
Translates to: VISLLTPLGTGESFQRTDVFILE*HCFPFP
Trigger: CGGAAAGGGGAAGCAGTGCCATTCAAGAATAAAGAC...ATCTGTCCTCTGGAATGACTCTCCTGTCCCTAAAGGGGTTAAGAGAGAGATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CCA 90 bp CATACTGTGATGGTACCACGGGCTGCTTCAATTGTAAGGCAAAGGAAGCAGGAACTGCACAGCTTTCAATaGGGAATCCTGAGTGATACA +
Preference number: 4 (lower is better)
Translates to: HTVMVPRAASIVRQRKQELHSFQ*GILSDT
Trigger: TGTATCACTCAGGATTCCCCATTGAAAGCTGTGCAG...TTCCTGCTTCCTTTGCCTTACAATTGAAGCAGCCCGTGGTACCATCACAGTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CCA 90 bp ACCCCAAAGAGGAGCCCACAAAAGTCTGCTTTGATGGTCTGTCTTGTCCTAGATTCCACGATGAAAATCTaGCAGATGAATGTGCCCAAG +
Preference number: 4 (lower is better)
Translates to: TPKRSPQKSALMVCLVLDSTMKI*QMNVPK
Trigger: CTTGGGCACATTCATCTGCCAGATTTTCATCGTGGA...ATCTAGGACAAGACAGACCATCAAAGCAGACTTTTGTGGGCTCCTCTTTGGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CCA 90 bp TGGGGGAGCTGCACTTGGTTGCAATCCACCGCATTGTTGTTTGTATTGGCATATTCCACGATGAAAATCTaGCAGATGAATGTGCCCAAG +
Preference number: 4 (lower is better)
Translates to: WGSCTWLQSTALLFVLAYSTMKI*QMNVPK
Trigger: CTTGGGCACATTCATCTGCCAGATTTTCATCGTGGA...ATATGCCAATACAAACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR CCA 90 bp CAGAGAAAGAAAATTCAAACTGATGTCTCTAGGCTCTGTAGAGAGCTGTCCGACAGCTCCATCTCAGCATaGTCAATCTCATCCAGTCCC +
Preference number: 4 (lower is better)
Translates to: QRKKIQTDVSRLCRELSDSSISA*SISSSP
Trigger: GGGACTGGATGAGATTGACCATGCTGAGATGGAGCT...GTCGGACAGCTCTCTACAGAGCCTAGAGACATCAGTTTGAATTTTCTTTCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp GAAGCTGTGGATGGACTTTTGGTTGTAGGGTTTCTGAATGCTTTCGTGGAGGGAAAAGAGGCTCCCGTCTaGAATGTGTTAATTACGTCG +
Preference number: 4 (lower is better)
Translates to: EAVDGLLVVGFLNAFVEGKEAPV*NVLITS
Trigger: CGACGTAATTAACACATTCCAGACGGGAGCCTCTTT...TCCCTCCACGAAAGCATTCAGAAACCCTACAACCAAAAGTCCATCCACAGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp ACCCCAAAGAGGAGCCCACAAAAGTCTGCTTTGATGGTCTGTCTTGTCCTAGATAAAGAGGCTCCCGTCTaGAATGTGTTAATTACGTCG +
Preference number: 4 (lower is better)
Translates to: TPKRSPQKSALMVCLVLDKEAPV*NVLITS
Trigger: CGACGTAATTAACACATTCCAGACGGGAGCCTCTTT...ATCTAGGACAAGACAGACCATCAAAGCAGACTTTTGTGGGCTCCTCTTTGGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp AGAAAGCTCAGGCTTTCAGGTAAAAACTGTATACCACACATATGCAACCTTCATAGAGAGCTGTCCGACTaGGGGAGCTGCACTTGGTTG +
Preference number: 4 (lower is better)
Translates to: RKLRLSGKNCIPHICNLHRELSD*GSCTWL
Trigger: CAACCAAGTGCAGCTCCCCCAGTCGGACAGCTCTCT...ATGAAGGTTGCATATGTGTGGTATACAGTTTTTACCTGAAAGCCTGAGCTTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp ATCCACCGCATTGTTGTTTGTATTGGCATATGGAGTGACCTCACCATCCAACAGGCTCTTGCCTCTTCATaGTCAGGTAGAGGTTCACTT +
Preference number: 4 (lower is better)
Translates to: IHRIVVCIGIWSDLTIQQALASS*SGRGSL
Trigger: AAGTGAACCTCTACCTGACCATGAAGAGGCAAGAGC...CTGTTGGATGGTGAGGTCACTCCATATGCCAATACAAACAACAATGCGGTGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR CCA 90 bp ATGAAAAATGCAAACCCCAAATCAGAGTATCCTTATAGACCAGGAGATATTCGTCCCCTGCCCCTCCAATaGGAAGGACCTCTCAGGTTC +
Preference number: 4 (lower is better)
Translates to: MKNANPKSEYPYRPGDIRPLPLQ*EGPLRF
Trigger: GAACCTGAGAGGTCCTTCCCATTGGAGGGGCAGGGG...ACGAATATCTCCTGGTCTATAAGGATACTCTGATTTGGGGTTTGCATTTTTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CCA 90 bp ATGAAAAATGCAAACCCCAAATCAGAGTATCCTTATAGACCAGGAGATATTCGTCCCTCCGGGTTTCCATaGATGAGGGTAGGGTGGGGT +
Preference number: 4 (lower is better)
Translates to: MKNANPKSEYPYRPGDIRPSGFP*MRVGWG
Trigger: ACCCCACCCTACCCTCATCCATGGAAACCCGGAGGG...ACGAATATCTCCTGGTCTATAAGGATACTCTGATTTGGGGTTTGCATTTTTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CCA 90 bp GCTCATCTCCTTCCATCTCTCCTAATCAAGAGCAAAGGGAACAGCAGGCCTAACAATCAAGGGTTCTTTTaGGCCAAAAGGGAGAAGGAT +
Preference number: 4 (lower is better)
Translates to: AHLLPSLLIKSKGNSRPNNQGFF*AKREKD
Trigger: ATCCTTCTCCCTTTTGGCCCAAAAGAACCCTTGATT...GTTAGGCCTGCTGTTCCCTTTGCTCTTGATTAGGAGAGATGGAAGGAGATGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp TTTTCAAAATCAGAATATTTGAGAAAGGCTGGGACCTTCTCAGAGACTGGAAAAAGTCAGGTCCTGCCCTaGAGAGCCTTGGCAGATGGC +
Preference number: 4 (lower is better)
Translates to: FSKSEYLRKAGTFSETGKSQVLP*RALADG
Trigger: GCCATCTGCCAAGGCTCTCCAGGGCAGGACCTGACT...TTTTCCAGTCTCTGAGAAGGTCCCAGCCTTTCTCAAATATTCTGATTTTGAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp GAAACTGGAGAGAATGTCGAAGCTGGTCCCCAGGCACCTAAGCTCAAGGTTTCTATTAGAATCAGAAACTaGAGAGAATGTCGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: ETGENVEAGPQAPKLKVSIRIRN*RECRSW
Trigger: CCAGCTTCGACATTCTCTCCAGTTTCTGATTCTAAT...AGAAACCTTGAGCTTAGGTGCCTGGGGACCAGCTTCGACATTCTCTCCAGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp CACAGACTTGTAGGACAAAATCCAGAATTCAGGAGAGGAACATCGGGGAGAATGGACCTTCTCAGAGACTaGAAAAGTTGTGACACGTGG +
Preference number: 4 (lower is better)
Translates to: HRLVGQNPEFRRGTSGRMDLLRD*KSCDTW
Trigger: CCACGTGTCACAACTTTTCCAGTCTCTGAGAAGGTC...CATTCTCCCCGATGTTCCTCTCCTGAATTCTGGATTTTGTCCTACAAGTCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp AAAAGTCTAGAACCCAACAATTTTTCTTCCCTAAGTATAAAGATGGCTGTTTGCAGCAGCTGGAGCATGTaGCTGAAGCGGGGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: KSLEPNNFSSLSIKMAVCSSWSM*LKRGWR
Trigger: CCTCCAGCCCCGCTTCAGCCACATGCTCCAGCTGCT...GCAAACAGCCATCTTTATACTTAGGGAAGAAAAATTGTTGGGTTCTAGACTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp AGAAAGCTCAGGCTTTCAGGTAAAAACTGTATACCACACATATGCAACCTTCATGGCACAGGGCTTTACTaGGCAGCAGCTGGAGCATGT +
Preference number: 4 (lower is better)
Translates to: RKLRLSGKNCIPHICNLHGTGLY*AAAGAC
Trigger: ACATGCTCCAGCTGCTGCCCAGTAAAGCCCTGTGCC...ATGAAGGTTGCATATGTGTGGTATACAGTTTTTACCTGAAAGCCTGAGCTTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp GGAGAAAACATGAACCAAAGGCCAATTCAGTTATGGGAGCTCATCTCCTTCCATGGGAAGGGGATGCTTTaGGCAGTATTCAGGGGAAAA +
Preference number: 4 (lower is better)
Translates to: GENMNQRPIQLWELISFHGKGML*AVFRGK
Trigger: TTTTCCCCTGAATACTGCCCAAAGCATCCCCTTCCC...ATGGAAGGAGATGAGCTCCCATAACTGAATTGGCCTTTGGTTCATGTTTTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp CACAGACTTGTAGGACAAAATCCAGAATTCAGGAGAGGAACATCGGGGAGAATGTCTCACATGGGAATTTaGCCGTTCATACATCCCCTC +
Preference number: 4 (lower is better)
Translates to: HRLVGQNPEFRRGTSGRMSHMGI*PFIHPL
Trigger: GAGGGGATGTATGAACGGCCAAATTCCCATGTGAGA...CATTCTCCCCGATGTTCCTCTCCTGAATTCTGGATTTTGTCCTACAAGTCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp GAAGCTGTGGATGGACTTTTGGTTGTAGGGTTTCTGAATGCTTTCGTGGAGGGACATCTTCCTCTCACATaGGAATTTGGCCGTTCATAC +
Preference number: 4 (lower is better)
Translates to: EAVDGLLVVGFLNAFVEGHLPLT*EFGRSY
Trigger: GTATGAACGGCCAAATTCCCATGTGAGAGGAAGATG...TCCCTCCACGAAAGCATTCAGAAACCCTACAACCAAAAGTCCATCCACAGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp AAAGTCTGCTTTGATGGTCTGTCTTGTCCTAGATTTGGCAGCGTCTGGTCCTCAGAAGAAAAGGCTAGGTaGATCAGGTCATCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: KVCFDGLSCPRFGSVWSSEEKAR*IRSSSS
Trigger: AGAGGAAGATGACCTGATCCACCTAGCCTTTTCTTC...TGAGGACCAGACGCTGCCAAATCTAGGACAAGACAGACCATCAAAGCAGACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp GAAGCTGTGGATGGACTTTTGGTTGTAGGGTTTCTGAATGCTTTCGTGGAGGGAGAAGAAAAGGCTAGGTaGATCAGGTCATCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: EAVDGLLVVGFLNAFVEGEEKAR*IRSSSS
Trigger: AGAGGAAGATGACCTGATCCACCTAGCCTTTTCTTC...TCCCTCCACGAAAGCATTCAGAAACCCTACAACCAAAAGTCCATCCACAGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp ATCCTAATGACTAGTCAGGAAAGATTCTGTCTATCCATCTGCATGGTGGGGGTTCCAATGCATCGGGGGTaGTCCCTAGATATGAAAGGT +
Preference number: 4 (lower is better)
Translates to: ILMTSQERFCLSICMVGVPMHRG*SLDMKG
Trigger: ACCTTTCATATCTAGGGACCACCCCCGATGCATTGG...AACCCCCACCATGCAGATGGATAGACAGAATCTTTCCTGACTAGTCATTAGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp GCAAAAATTAGAATCAGAAACTGGAGAGAATGTCGAAGCTGGTCCCCAGGCACCAGGAAGAGGCTGGAATaGCTTAACAATAGCAGGCAT +
Preference number: 4 (lower is better)
Translates to: AKIRIRNWRECRSWSPGTRKRLE*LNNSRH
Trigger: ATGCCTGCTATTGTTAAGCCATTCCAGCCTCTTCCT...GGTGCCTGGGGACCAGCTTCGACATTCTCTCCAGTTTCTGATTCTAATTTTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp CCTTGTAAGTCTGTGCTCTTGCCTCTTCATGGTCAGGTAGAGGTTCACTTCACAAGGCCAATTCAGTTATaGGAGCTCATCTCCTTCCAT +
Preference number: 4 (lower is better)
Translates to: PCKSVLLPLHGQVEVHFTRPIQL*ELISFH
Trigger: ATGGAAGGAGATGAGCTCCCATAACTGAATTGGCCT...TGTGAAGTGAACCTCTACCTGACCATGAAGAGGCAAGAGCACAGACTTACAAGG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp GTGATCTCTCTCTTAACCCCTTTAGGGACAGGAGAGTCATTCCAGAGGACAGATCAACACACACTGGACTaGGGTATACGTTGCTTTGAT +
Preference number: 4 (lower is better)
Translates to: VISLLTPLGTGESFQRTDQHTLD*GIRCFD
Trigger: ATCAAAGCAACGTATACCCCAGTCCAGTGTGTGTTG...ATCTGTCCTCTGGAATGACTCTCCTGTCCCTAAAGGGGTTAAGAGAGAGATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR TCA 90 bp ATCCTAATGACTAGTCAGGAAAGATTCTGTCTATCCATCTGCATGGTGGGGGTTACCAACTTGCCCAGATaGAGGTGTAAACAGGATGTG +
Preference number: 4 (lower is better)
Translates to: ILMTSQERFCLSICMVGVTNLPR*RCKQDV
Trigger: CACATCCTGTTTACACCTTCATCTGGGCAAGTTGGT...AACCCCCACCATGCAGATGGATAGACAGAATCTTTCCTGACTAGTCATTAGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR TCA 90 bp CACAGACTTGTAGGACAAAATCCAGAATTCAGGAGAGGAACATCGGGGAGAATGGCAGATCACCGTATTTaGCTTGGGCAATATCACCAA +
Preference number: 4 (lower is better)
Translates to: HRLVGQNPEFRRGTSGRMADHRI*LGQYHQ
Trigger: TTGGTGATATTGCCCAAGTCAAATACGGTGATCTGC...CATTCTCCCCGATGTTCCTCTCCTGAATTCTGGATTTTGTCCTACAAGTCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000357681.10
ENST00000367218.7
CDS-3UTR TCA 90 bp AGTGAAAGGGCGTCTGGTCTATTCAGAGGAAGAGGCTGGAATGGCTTAACAATAGCAGATCACCGTATTTaGCTTGGGCAATATCACCAA +
Preference number: 4 (lower is better)
Translates to: SERASGLFRGRGWNGLTIADHRI*LGQYHQ
Trigger: TTGGTGATATTGCCCAAGTCAAATACGGTGATCTGC...TATTGTTAAGCCATTCCAGCCTCTTCCTCTGAATAGACCAGACGCCCTTTCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR TCA 90 bp AAAAGTTGTGACACGTGGCAAAAATTAGAATCAGAAACTGGAGAGAATGTCGAATTCCCTCCTGGCTGTTaGGTGGCTGGATTTCCAGGG +
Preference number: 4 (lower is better)
Translates to: KSCDTWQKLESETGENVEFPPGC*VAGFPG
Trigger: CCCTGGAAATCCAGCCACTCAACAGCCAGGAGGGAA...TTCGACATTCTCTCCAGTTTCTGATTCTAATTTTTGCCACGTGTCACAACTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR TCA 90 bp TTGGTTAAAGTGGATGCCACGTGCTCTCTTGTGGTCATTTTAGCAAATCATGCATGGTGGGGGAAGATTTaGCTGGTGCAACTGCTACAT +
Preference number: 4 (lower is better)
Translates to: LVKVDATCSLVVILANHAWWGKI*LVQLLH
Trigger: ATGTAGCAGTTGCACCAGTCAAATCTTCCCCCACCA...TGCATGATTTGCTAAAATGACCACAAGAGAGCACGTGGCATCCACTTTAACCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356729.5
CDS-3UTR TCA 90 bp GGCAGGGTCATACCCAGTTCATTCTTTTGCCACCACTTTAGGAATAAGAGAAAGTATTGGCATATGGAGTaGCCTCACCATCCAACAGGA +
Preference number: 4 (lower is better)
Translates to: GRVIPSSFFCHHFRNKRKYWHME*PHHPTG
Trigger: TCCTGTTGGATGGTGAGGTCACTCCATATGCCAATA...CTTTCTCTTATTCCTAAAGTGGTGGCAAAAGAATGAACTGGGTATGACCCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR TCA 90 bp ACCCCAAAGAGGAGCCCACAAAAGTCTGCTTTGATGGTCTGTCTTGTCCTAGATATTCCAGAGGACAGATaGTACTATGGGAAGGATCTA +
Preference number: 4 (lower is better)
Translates to: TPKRSPQKSALMVCLVLDIPEDR*YYGKDL
Trigger: TAGATCCTTCCCATAGTATCATCTGTCCTCTGGAAT...ATCTAGGACAAGACAGACCATCAAAGCAGACTTTTGTGGGCTCCTCTTTGGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR TCA 90 bp TCTGGAACTAAATCAAGGGTTCTTTTGGGCCAAAAGGGAGAAGGATCTAAGTTTGCCAACTCTCCTCTCTaGAGCTCAAGGGGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: SGTKSRVLLGQKGEGSKFANSPL*SSRGRR
Trigger: TCTTCTTCCCCTTGAGCTTCAGAGAGGAGAGTTGGC...AAACTTAGATCCTTCTCCCTTTTGGCCCAAAAGAACCCTTGATTTAGTTCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR TCA 90 bp GCAAAAATTAGAATCAGAAACTGGAGAGAATGTCGAAGCTGGTCCCCAGGCACCCTGGGTTTTCAGCAGTaGGGTAACCATTCAGATTTA +
Preference number: 4 (lower is better)
Translates to: AKIRIRNWRECRSWSPGTLGFQQ*GNHSDL
Trigger: TAAATCTGAATGGTTACCTCACTGCTGAAAACCCAG...GGTGCCTGGGGACCAGCTTCGACATTCTCTCCAGTTTCTGATTCTAATTTTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR TCA 90 bp TCTGGAACTAAATCAAGGGTTCTTTTGGGCCAAAAGGGAGAAGGATCTAAGTTTAGTCTCTGCATACTGTaGTGGTACCACGGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: SGTKSRVLLGQKGEGSKFSLCIL*WYHGLL
Trigger: AAGCAGCCCGTGGTACCATCACAGTATGCAGAGACT...AAACTTAGATCCTTCTCCCTTTTGGCCCAAAAGAACCCTTGATTTAGTTCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR TCA 90 bp GAGCTGCACTTGGTTGCAATCCACCGCATTGTTGTTTGTATTGGCGAATTCAGGTATGGGGAGAAAACATaGACCAAAGGCCAATTCAGT +
Preference number: 4 (lower is better)
Translates to: ELHLVAIHRIVVCIGEFRYGEKT*TKGQFS
Trigger: ACTGAATTGGCCTTTGGTTCATGTTTTCTCCCCATA...CCTGAATTCGCCAATACAAACAACAATGCGGTGGATTGCAACCAAGTGCAGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484746.1
CDS-3UTR GCA 90 bp AGTGAAAGGGCGTCTGGTCTATTCAGAGGAAGAGGCTGGAATGGCTTAACAATATTGTGTCCAAACACCTaGCTACGTTTCTCCAGATCT +
Preference number: 4 (lower is better)
Translates to: SERASGLFRGRGWNGLTILCPNT*LRFSRS
Trigger: AGATCTGGAGAAACGTAGGCAGGTGTTTGGACACAA...TATTGTTAAGCCATTCCAGCCTCTTCCTCTGAATAGACCAGACGCCCTTTCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR GCA 90 bp CAGAGAAAGAAAATTCAAACTGATGTCTCTAGGCTCTGTAGAGAGCTGTCCGACATCTTCTGGGGTAGTTaGGACTTGACCACACAGTTC +
Preference number: 4 (lower is better)
Translates to: QRKKIQTDVSRLCRELSDIFWGS*DLTTQF
Trigger: GAACTGTGTGGTCAAGTCGCAACTACCCCAGAAGAT...GTCGGACAGCTCTCTACAGAGCCTAGAGACATCAGTTTGAATTTTCTTTCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR GCA 90 bp AGTGAAAGGGCGTCTGGTCTATTCAGAGGAAGAGGCTGGAATGGCTTAACAATAAATCCAGCCAGCTTGTaGCTCATTTTCATCTTCTGG +
Preference number: 4 (lower is better)
Translates to: SERASGLFRGRGWNGLTINPASL*LIFIFW
Trigger: CCAGAAGATGAAAATGAGGCACAAGCTGGCTGGATT...TATTGTTAAGCCATTCCAGCCTCTTCCTCTGAATAGACCAGACGCCCTTTCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR GCA 90 bp CACAGACTTGTAGGACAAAATCCAGAATTCAGGAGAGGAACATCGGGGAGAATGGGGTCTTTGCTTTGTTaGGATTTTCAGGGACTCCTT +
Preference number: 4 (lower is better)
Translates to: HRLVGQNPEFRRGTSGRMGSLLC*DFQGLL
Trigger: AAGGAGTCCCTGAAAATCGCAACAAAGCAAAGACCC...CATTCTCCCCGATGTTCCTCTCCTGAATTCTGGATTTTGTCCTACAAGTCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000357681.10
ENST00000367218.7
CDS-3UTR GCA 90 bp GTATTGGTTTCTGTTCATCAGCAAAAAGCTTTATTGGCTCCAACAAATTATCCCCCAGGCGAGTCAGCTTaGCCTGCAGCACTGACTTCT +
Preference number: 4 (lower is better)
Translates to: VLVSVHQQKALLAPTNYPPGESA*PAALTS
Trigger: AGAAGTCAGTGCTGCAGGGCAAGCTGACTCGCCTGG...GGGATAATTTGTTGGAGCCAATAAAGCTTTTTGCTGATGAACAGAAACCAATAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR GCA 90 bp TGTCCAGAGGGATTTCTAGGTGATCTCTCTCTTAACCCCTTTAGGGACAGGAGATCACAAGCATCCAAGTaGCGTACTAGGTTATTGTCT +
Preference number: 4 (lower is better)
Translates to: CPEGFLGDLSLNPFRDRRSQASK*RTRLLS
Trigger: AGACAATAACCTAGTACGGCACTTGGATGCTTGTGA...TCTCCTGTCCCTAAAGGGGTTAAGAGAGAGATCACCTAGAAATCCCTCTGGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR GCA 90 bp CCAAATCAGAGTATCCTTATAGACCAGGAGATATTCGTGTCTTTTATACCACTCTCTCCTCTTTGGTGGTaGCATGCCCAGCCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: PNQSILIDQEIFVSFIPLSPLWW*HAQPPS
Trigger: TGAAGGAGGCTGGGCATGGCACCACCAAAGAGGAGA...GAGTGGTATAAAAGACACGAATATCTCCTGGTCTATAAGGATACTCTGATTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR GCA 90 bp AAAAGTTGTGACACGTGGCAAAAATTAGAATCAGAAACTGGAGAGAATGTCGAATCCGACTGGGGGAGCTaGACTTGGTTGCAATCCACC +
Preference number: 4 (lower is better)
Translates to: KSCDTWQKLESETGENVESDWGS*TWLQST
Trigger: GGTGGATTGCAACCAAGTGCAGCTCCCCCAGTCGGA...TTCGACATTCTCTCCAGTTTCTGATTCTAATTTTTGCCACGTGTCACAACTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR GCA 90 bp AAAAGTCTAGAACCCAACAATTTTTCTTCCCTAAGTATAAAGATGGCTGTTTGCTCTTCGGAGGGATGGTaGCCCACGAAGTTCGTGCCC +
Preference number: 4 (lower is better)
Translates to: KSLEPNNFSSLSIKMAVCSSEGW*PTKFVP
Trigger: GGGCACGAACTTCGTGGGGCACCATCCCTCCGAAGA...GCAAACAGCCATCTTTATACTTAGGGAAGAAAAATTGTTGGGTTCTAGACTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR GCA 90 bp AGTGAAAGGGCGTCTGGTCTATTCAGAGGAAGAGGCTGGAATGGCTTAACAATATGTATACCACACATATaGAACCTTCATGGGCAAGGC +
Preference number: 4 (lower is better)
Translates to: SERASGLFRGRGWNGLTICIPHI*NLHGQG
Trigger: GCCTTGCCCATGAAGGTTGCATATGTGTGGTATACA...TATTGTTAAGCCATTCCAGCCTCTTCCTCTGAATAGACCAGACGCCCTTTCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR GCA 90 bp CCAAAGAGGAGCCCACAAAAGTCTGCTTTGATGGTCTGTCTTGTCCTAGATTTGCTAAGTCACCTGTCATaGCAAACAGCTGGTTATGTG +
Preference number: 4 (lower is better)
Translates to: PKRSPQKSALMVCLVLDLLSHLS*QTAGYV
Trigger: CACATAACCAGCTGTTTGGCATGACAGGTGACTTAG...CAAATCTAGGACAAGACAGACCATCAAAGCAGACTTTTGTGGGCTCCTCTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR GCA 90 bp GGGGAGCTGCACTTGGTTGCAATCCACCGCATTGTTGTTTGTATTGGCATATGGGACTGGGGTATACGTTaGTTTGATATCACCATTTGT +
Preference number: 4 (lower is better)
Translates to: GELHLVAIHRIVVCIGIWDWGIR*FDITIC
Trigger: ACAAATGGTGATATCAAAGCAACGTATACCCCAGTC...CCATATGCCAATACAAACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367218.7
CDS-3UTR CCA 90 bp GTATTGGTTTCTGTTCATCAGCAAAAAGCTTTATTGGCTCCAACAAATTATCCCTCTCGGCCATCGAGTTaGCAGGCAAGACACGGTCTG +
Preference number: 4 (lower is better)
Translates to: VLVSVHQQKALLAPTNYPSRPSS*QARHGL
Trigger: CAGACCGTGTCTTGCCTGCCAACTCGATGGCCGAGA...GGGATAATTTGTTGGAGCCAATAAAGCTTTTTGCTGATGAACAGAAACCAATAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CCA 90 bp ATCCAACAGGAGCACCCTAGTCCCAAACTTAGAAGCCTTGTCAGGATTTTCCTCTTCAGATCATTCCCTTaGATCAGGATTCCATCTGCA +
Preference number: 4 (lower is better)
Translates to: IQQEHPSPKLRSLVRIFLFRSFP*IRIPSA
Trigger: TGCAGATGGAATCCTGATCCAAGGGAATGATCTGAA...GAGGAAAATCCTGACAAGGCTTCTAAGTTTGGGACTAGGGTGCTCCTGTTGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR CCA 90 bp AACTTAGCTTATAAATGGCACAGACTTGTAGGACAAAATCCAGAATTCAGGAGACTCCTGGCTGTTGAGTaGCTGGATTTCCAGGGCCAC +
Preference number: 4 (lower is better)
Translates to: NLAYKWHRLVGQNPEFRRLLAVE*LDFQGH
Trigger: GTGGCCCTGGAAATCCAGCCACTCAACAGCCAGGAG...TCTCCTGAATTCTGGATTTTGTCCTACAAGTCTGTGCCATTTATAAGCTAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CCA 90 bp CACAGACTTGTAGGACAAAATCCAGAATTCAGGAGAGGAACATCGGGGAGAATGACACTCAGGGAGCCATaGTCTGCGATTTATCACAAA +
Preference number: 4 (lower is better)
Translates to: HRLVGQNPEFRRGTSGRMTLREP*SAIYHK
Trigger: TTTGTGATAAATCGCAGACCATGGCTCCCTGAGTGT...CATTCTCCCCGATGTTCCTCTCCTGAATTCTGGATTTTGTCCTACAAGTCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CCA 90 bp ATCCACCGCATTGTTGTTTGTATTGGCATATGGAGTGACCTCACCATCCAACAGCTGCACAGCTTTCAATaGGGAATCCTGAGTGATACA +
Preference number: 4 (lower is better)
Translates to: IHRIVVCIGIWSDLTIQQLHSFQ*GILSDT
Trigger: TGTATCACTCAGGATTCCCCATTGAAAGCTGTGCAG...CTGTTGGATGGTGAGGTCACTCCATATGCCAATACAAACAACAATGCGGTGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR CCA 90 bp GTGATCTCTCTCTTAACCCCTTTAGGGACAGGAGAGTCATTCCAGAGGACAGATACGTTCTTCTCTCCATaGATCTTTCGGGAGTTGATT +
Preference number: 4 (lower is better)
Translates to: VISLLTPLGTGESFQRTDTFFSP*IFRELI
Trigger: AATCAACTCCCGAAAGATCCATGGAGAGAAGAACGT...ATCTGTCCTCTGGAATGACTCTCCTGTCCCTAAAGGGGTTAAGAGAGAGATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CCA 90 bp ATCCAACAGGAGCACCCTAGTCCCAAACTTAGAAGCCTTGTCAGGATTTTCCTCACGTTCTTCTCTCCATaGATCTTTCGGGAGTTGATT +
Preference number: 4 (lower is better)
Translates to: IQQEHPSPKLRSLVRIFLTFFSP*IFRELI
Trigger: AATCAACTCCCGAAAGATCCATGGAGAGAAGAACGT...GAGGAAAATCCTGACAAGGCTTCTAAGTTTGGGACTAGGGTGCTCCTGTTGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR CCA 90 bp TTGGTTAAAGTGGATGCCACGTGCTCTCTTGTGGTCATTTTAGCAAATCATGCAAGCTCCATCTCAGCATaGTCAATCTCATCCAGTCCC +
Preference number: 4 (lower is better)
Translates to: LVKVDATCSLVVILANHASSISA*SISSSP
Trigger: GGGACTGGATGAGATTGACCATGCTGAGATGGAGCT...TGCATGATTTGCTAAAATGACCACAAGAGAGCACGTGGCATCCACTTTAACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356729.5
CDS-3UTR CCA 90 bp CAGAGAAAGAAAATTCAAACTGATGTCTCTAGGCTCTGTAGAGAGCTGTCCGACTCGTGGAGGGAACTATaGAACGCTTTGACCACTTTG +
Preference number: 4 (lower is better)
Translates to: QRKKIQTDVSRLCRELSDSWREL*NALTTL
Trigger: CAAAGTGGTCAAAGCGTTCCATAGTTCCCTCCACGA...GTCGGACAGCTCTCTACAGAGCCTAGAGACATCAGTTTGAATTTTCTTTCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp TGGGGGAGCTGCACTTGGTTGCAATCCACCGCATTGTTGTTTGTATTGGCATATGTTTGTATTGGCATATaGAGTGACCTCACCATCCAA +
Preference number: 4 (lower is better)
Translates to: WGSCTWLQSTALLFVLAYVCIGI*SDLTIQ
Trigger: TTGGATGGTGAGGTCACTCCATATGCCAATACAAAC...ATATGCCAATACAAACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR CCA 90 bp ATGGCTTTGAAAGCAGTGGTCACCCCAAAGAGGAGCCCACAAAAGTCTGCTTTGGCAACATATTTCACTTaGGGATATTTGTCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: MALKAVVTPKRSPQKSALATYFT*GYLSPS
Trigger: AGAGGGAGACAAATATCCCCAAGTGAAATATGTTGC...CAAAGCAGACTTTTGTGGGCTCCTCTTTGGGGTGACCACTGCTTTCAAAGCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp AGTGTTATTAACTTATGCCATATTTACCCACTGCCAGTTGGATCAGTGAAACTGGAGCTCCTGCAAACGTaGCTCCACGTTGTCCCAGTA +
Preference number: 4 (lower is better)
Translates to: SVINLCHIYPLPVGSVKLELLQT*LHVVPV
Trigger: TACTGGGACAACGTGGAGCCACGTTTGCAGGAGCTC...CAGTTTCACTGATCCAACTGGCAGTGGGTAAATATGGCATAAGTTAATAACACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp GGCTGGAATGGCTTAACAATAGCAGGCATTTATAAGTGCCCACCCTCACCAATGGGACAGATGATACTATaGGAAGGATCTAGCCTTAAG +
Preference number: 4 (lower is better)
Translates to: GWNGLTIAGIYKCPPSPMGQMIL*EGSSLK
Trigger: CTTAAGGCTAGATCCTTCCCATAGTATCATCTGTCC...CATTGGTGAGGGTGGGCACTTATAAATGCCTGCTATTGTTAAGCCATTCCAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp CAGAGAAAGAAAATTCAAACTGATGTCTCTAGGCTCTGTAGAGAGCTGTCCGACTATGGCAACACACACTaGACTGGGGTATACGTTGCT +
Preference number: 4 (lower is better)
Translates to: QRKKIQTDVSRLCRELSDYGNTH*TGVYVA
Trigger: AGCAACGTATACCCCAGTCCAGTGTGTGTTGCCATA...GTCGGACAGCTCTCTACAGAGCCTAGAGACATCAGTTTGAATTTTCTTTCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp GAGCCCACAAAAGTCTGCTTTGATGGTCTGTCTTGTCCTAGATTTGGCAGCGTCAGTGCACAGCAGTATTaGTTTCTGTTCATCAGCAAA +
Preference number: 4 (lower is better)
Translates to: EPTKVCFDGLSCPRFGSVSAQQY*FLFISK
Trigger: TTTGCTGATGAACAGAAACCAATACTGCTGTGCACT...GACGCTGCCAAATCTAGGACAAGACAGACCATCAAAGCAGACTTTTGTGGGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp GAGGAAGTCTCTGCATACTGTGATGGTACCACGGGCTGCTTCAATTGTAAGGCAAGTGCACAGCAGTATTaGTTTCTGTTCATCAGCAAA +
Preference number: 4 (lower is better)
Translates to: EEVSAYCDGTTGCFNCKASAQQY*FLFISK
Trigger: TTTGCTGATGAACAGAAACCAATACTGCTGTGCACT...TGCCTTACAATTGAAGCAGCCCGTGGTACCATCACAGTATGCAGAGACTTCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR TCA 90 bp AGTGTTATTAACTTATGCCATATTTACCCACTGCCAGTTGGATCAGTGAAACTGAGGCAAGACACGGTCTaGTGGGTTCGTCATTTTGCC +
Preference number: 4 (lower is better)
Translates to: SVINLCHIYPLPVGSVKLRQDTV*WVRHFA
Trigger: GGCAAAATGACGAACCCATCAGACCGTGTCTTGCCT...CAGTTTCACTGATCCAACTGGCAGTGGGTAAATATGGCATAAGTTAATAACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR TCA 90 bp AACTTAGCTTATAAATGGCACAGACTTGTAGGACAAAATCCAGAATTCAGGAGACACCACGATGATCACTaGGAAAAGGATGGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: NLAYKWHRLVGQNPEFRRHHDDH*EKDGCP
Trigger: GGGGCAGCCATCCTTTTCTCAGTGATCATCGTGGTG...TCTCCTGAATTCTGGATTTTGTCCTACAAGTCTGTGCCATTTATAAGCTAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000357681.10
ENST00000367218.7
CDS-3UTR TCA 90 bp AAAAGTTGTGACACGTGGCAAAAATTAGAATCAGAAACTGGAGAGAATGTCGAACACCACGATGATCACTaGGAAAAGGATGGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: KSCDTWQKLESETGENVEHHDDH*EKDGCP
Trigger: GGGGCAGCCATCCTTTTCTCAGTGATCATCGTGGTG...TTCGACATTCTCTCCAGTTTCTGATTCTAATTTTTGCCACGTGTCACAACTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR TCA 90 bp CAGAGAAAGAAAATTCAAACTGATGTCTCTAGGCTCTGTAGAGAGCTGTCCGACTCACTAACACCACGATaGTCACTGAGAAAAGGATGG +
Preference number: 4 (lower is better)
Translates to: QRKKIQTDVSRLCRELSDSLTPR*SLRKGW
Trigger: CCATCCTTTTCTCAGTGATCATCGTGGTGTTAGTGA...GTCGGACAGCTCTCTACAGAGCCTAGAGACATCAGTTTGAATTTTCTTTCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR TCA 90 bp ATCCTAATGACTAGTCAGGAAAGATTCTGTCTATCCATCTGCATGGTGGGGGTTGCAGATCACCGTATTTaGCTTGGGCAATATCACCAA +
Preference number: 4 (lower is better)
Translates to: ILMTSQERFCLSICMVGVADHRI*LGQYHQ
Trigger: TTGGTGATATTGCCCAAGTCAAATACGGTGATCTGC...AACCCCCACCATGCAGATGGATAGACAGAATCTTTCCTGACTAGTCATTAGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR TCA 90 bp AAAAGTCTAGAACCCAACAATTTTTCTTCCCTAAGTATAAAGATGGCTGTTTGCTGGCCCGGGCTGTGTTaGTGTTGTCACCTGTCACCA +
Preference number: 4 (lower is better)
Translates to: KSLEPNNFSSLSIKMAVCWPGLC*CCHLSP
Trigger: TGGTGACAGGTGACAACATCAACACAGCCCGGGCCA...GCAAACAGCCATCTTTATACTTAGGGAAGAAAAATTGTTGGGTTCTAGACTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR TCA 90 bp GGGGAGCTGCACTTGGTTGCAATCCACCGCATTGTTGTTTGTATTGGCATATGGAACTGCTACATAGGATaGACTAGGAACAAGTTTTAC +
Preference number: 4 (lower is better)
Translates to: GELHLVAIHRIVVCIGIWNCYIG*TRNKFY
Trigger: GTAAAACTTGTTCCTAGTTCATCCTATGTAGCAGTT...CCATATGCCAATACAAACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR TCA 90 bp ATGGCTTTGAAAGCAGTGGTCACCCCAAAGAGGAGCCCACAAAAGTCTGCTTTGAAGTCAAGCTTAAGTTaGAATCCTTGTAAGTCTGTG +
Preference number: 4 (lower is better)
Translates to: MALKAVVTPKRSPQKSALKSSLS*NPCKSV
Trigger: CACAGACTTACAAGGATTTCAACTTAAGCTTGACTT...CAAAGCAGACTTTTGTGGGCTCCTCTTTGGGGTGACCACTGCTTTCAAAGCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR TCA 90 bp CTGGCGGATTTTATACATTCCATCTCTACCGCAACATATTTCACTTGGGGATATGATTCTACCATGACCTaGATGGGGTTTGACTGGGTC +
Preference number: 4 (lower is better)
Translates to: LADFIHSISTATYFTWGYDSTMT*MGFDWV
Trigger: GACCCAGTCAAACCCCATTCAGGTCATGGTAGAATC...ATATCCCCAAGTGAAATATGTTGCGGTAGAGATGGAATGTATAAAATCCGCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341360.6
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR TCA 90 bp AAAGTCTGCTTTGATGGTCTGTCTTGTCCTAGATTTGGCAGCGTCTGGTCCTCAATATTTGTCTCCCTCTaGACCCTCAACTTAGCTTAT +
Preference number: 4 (lower is better)
Translates to: KVCFDGLSCPRFGSVWSSIFVSL*TLNLAY
Trigger: ATAAGCTAAGTTGAGGGTTCAGAGGGAGACAAATAT...TGAGGACCAGACGCTGCCAAATCTAGGACAAGACAGACCATCAAAGCAGACTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR TCA 90 bp GGCTGGAATGGCTTAACAATAGCAGGCATTTATAAGTGCCCACCCTCACCAATGAGACTGGAAAAGTTGTaGCACGTGGCAAAAATTAGA +
Preference number: 4 (lower is better)
Translates to: GWNGLTIAGIYKCPPSPMRLEKL*HVAKIR
Trigger: TCTAATTTTTGCCACGTGTCACAACTTTTCCAGTCT...CATTGGTGAGGGTGGGCACTTATAAATGCCTGCTATTGTTAAGCCATTCCAGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR TCA 90 bp GCAAAAATTAGAATCAGAAACTGGAGAGAATGTCGAAGCTGGTCCCCAGGCACCTTCCACAGGGCTACATaGCGGCACTTTATTTTAAAT +
Preference number: 4 (lower is better)
Translates to: AKIRIRNWRECRSWSPGTFHRAT*RHFILN
Trigger: ATTTAAAATAAAGTGCCGTCATGTAGCCCTGTGGAA...GGTGCCTGGGGACCAGCTTCGACATTCTCTCCAGTTTCTGATTCTAATTTTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR TCA 90 bp AGTGAAAGGGCGTCTGGTCTATTCAGAGGAAGAGGCTGGAATGGCTTAACAATAATTCCAGAGGACAGATaGTACTATGGGAAGGATCTA +
Preference number: 4 (lower is better)
Translates to: SERASGLFRGRGWNGLTIIPEDR*YYGKDL
Trigger: TAGATCCTTCCCATAGTATCATCTGTCCTCTGGAAT...TATTGTTAAGCCATTCCAGCCTCTTCCTCTGAATAGACCAGACGCCCTTTCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR TCA 90 bp TACCACTCTGCCAGCTATTCTTCAAGAAACACAAATCCAACAGAGGCCCCTGATCTGGGTTTTCAGCAGTaGGGTAACCATTCAGATTTA +
Preference number: 4 (lower is better)
Translates to: YHSASYSSRNTNPTEAPDLGFQQ*GNHSDL
Trigger: TAAATCTGAATGGTTACCTCACTGCTGAAAACCCAG...ATCAGGGGCCTCTGTTGGATTTGTGTTTCTTGAAGAATAGCTGGCAGAGTGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR TCA 90 bp CACAGACTTGTAGGACAAAATCCAGAATTCAGGAGAGGAACATCGGGGAGAATGCTGGGTTTTCAGCAGTaGGGTAACCATTCAGATTTA +
Preference number: 4 (lower is better)
Translates to: HRLVGQNPEFRRGTSGRMLGFQQ*GNHSDL
Trigger: TAAATCTGAATGGTTACCTCACTGCTGAAAACCCAG...CATTCTCCCCGATGTTCCTCTCCTGAATTCTGGATTTTGTCCTACAAGTCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR TCA 90 bp GGAGAAAACATGAACCAAAGGCCAATTCAGTTATGGGAGCTCATCTCCTTCCATCCTAGATATGAAAGGTaGGGAAGTCTCTGCATACTG +
Preference number: 4 (lower is better)
Translates to: GENMNQRPIQLWELISFHPRYER*GSLCIL
Trigger: CAGTATGCAGAGACTTCCTCACCTTTCATATCTAGG...ATGGAAGGAGATGAGCTCCCATAACTGAATTGGCCTTTGGTTCATGTTTTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR TCA 90 bp TACCACTCTGCCAGCTATTCTTCAAGAAACACAAATCCAACAGAGGCCCCTGATTATGGGGAGAAAACATaGACCAAAGGCCAATTCAGT +
Preference number: 4 (lower is better)
Translates to: YHSASYSSRNTNPTEAPDYGEKT*TKGQFS
Trigger: ACTGAATTGGCCTTTGGTTCATGTTTTCTCCCCATA...ATCAGGGGCCTCTGTTGGATTTGTGTTTCTTGAAGAATAGCTGGCAGAGTGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR TCA 90 bp GAGCCCACAAAAGTCTGCTTTGATGGTCTGTCTTGTCCTAGATTTGGCAGCGTCGGGTATACGTTGCTTTaGTATCACCATTTGTTTGTT +
Preference number: 4 (lower is better)
Translates to: EPTKVCFDGLSCPRFGSVGYTLL*YHHLFV
Trigger: AACAAACAAATGGTGATATCAAAGCAACGTATACCC...GACGCTGCCAAATCTAGGACAAGACAGACCATCAAAGCAGACTTTTGTGGGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR GCA 90 bp GCTCATCTCCTTCCATCTCTCCTAATCAAGAGCAAAGGGAACAGCAGGCCTAACATTGAATATATCTTGTaGAATAAGCTCCCGAGTAGC +
Preference number: 4 (lower is better)
Translates to: AHLLPSLLIKSKGNSRPNIEYIL*NKLPSS
Trigger: GCTACTCGGGAGCTTATTGCACAAGATATATTCAAT...GTTAGGCCTGCTGTTCCCTTTGCTCTTGATTAGGAGAGATGGAAGGAGATGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR GCA 90 bp AGTGTTATTAACTTATGCCATATTTACCCACTGCCAGTTGGATCAGTGAAACTGCTTCTTCCTACTTCTTaGTTCTCTGGGGGCCCAGTG +
Preference number: 4 (lower is better)
Translates to: SVINLCHIYPLPVGSVKLLLPTS*FSGGPV
Trigger: CACTGGGCCCCCAGAGAAGCAAGAAGTAGGAAGAAG...CAGTTTCACTGATCCAACTGGCAGTGGGTAAATATGGCATAAGTTAATAACACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR GCA 90 bp CCAAATCAGAGTATCCTTATAGACCAGGAGATATTCGTGTCTTTTATACCACTCCCCCAGGTGTCAGAATaGCACATTTGGTGGCAATGG +
Preference number: 4 (lower is better)
Translates to: PNQSILIDQEIFVSFIPLPQVSE*HIWWQW
Trigger: CCATTGCCACCAAATGTGGCATTCTGACACCTGGGG...GAGTGGTATAAAAGACACGAATATCTCCTGGTCTATAAGGATACTCTGATTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR GCA 90 bp ATCCAACAGGAGCACCCTAGTCCCAAACTTAGAAGCCTTGTCAGGATTTTCCTCAATGAGCTGATAGAATaGATGGCCCAAGATGTTCTT +
Preference number: 4 (lower is better)
Translates to: IQQEHPSPKLRSLVRIFLNELIE*MAQDVL
Trigger: AAGAACATCTTGGGCCATGCATTCTATCAGCTCATT...GAGGAAAATCCTGACAAGGCTTCTAAGTTTGGGACTAGGGTGCTCCTGTTGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR GCA 90 bp AACTTAGCTTATAAATGGCACAGACTTGTAGGACAAAATCCAGAATTCAGGAGAGGATCGGGTAGGTATTaGGGAGATGAACTGGCCCCA +
Preference number: 4 (lower is better)
Translates to: NLAYKWHRLVGQNPEFRRGSGRY*GDELAP
Trigger: TGGGGCCAGTTCATCTCCGCAATACCTACCCGATCC...TCTCCTGAATTCTGGATTTTGTCCTACAAGTCTGTGCCATTTATAAGCTAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000357681.10
ENST00000367218.7
CDS-3UTR GCA 90 bp TACCACTCTGCCAGCTATTCTTCAAGAAACACAAATCCAACAGAGGCCCCTGATTGTAGGGTTTCTGAATaGTTTCGTGGAGGGAACTAT +
Preference number: 4 (lower is better)
Translates to: YHSASYSSRNTNPTEAPDCRVSE*FRGGNY
Trigger: ATAGTTCCCTCCACGAAAGCATTCAGAAACCCTACA...ATCAGGGGCCTCTGTTGGATTTGTGTTTCTTGAAGAATAGCTGGCAGAGTGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR GCA 90 bp GTGATCTCTCTCTTAACCCCTTTAGGGACAGGAGAGTCATTCCAGAGGACAGATCCCAGTTCATTCTTTTaGCACCACTTTAGGAATAAG +
Preference number: 4 (lower is better)
Translates to: VISLLTPLGTGESFQRTDPSSFF*HHFRNK
Trigger: CTTATTCCTAAAGTGGTGGCAAAAGAATGAACTGGG...ATCTGTCCTCTGGAATGACTCTCCTGTCCCTAAAGGGGTTAAGAGAGAGATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR GCA 90 bp GGCAGGGTCATACCCAGTTCATTCTTTTGCCACCACTTTAGGAATAAGAGAAAGGAGCCCACAAAAGTCTaGTTTGATGGTCTGTCTTGT +
Preference number: 4 (lower is better)
Translates to: GRVIPSSFFCHHFRNKRKEPTKV*FDGLSC
Trigger: ACAAGACAGACCATCAAAGCAGACTTTTGTGGGCTC...CTTTCTCTTATTCCTAAAGTGGTGGCAAAAGAATGAACTGGGTATGACCCTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR GCA 90 bp GGCTGGAATGGCTTAACAATAGCAGGCATTTATAAGTGCCCACCCTCACCAATGGACTGGGGTATACGTTaGTTTGATATCACCATTTGT +
Preference number: 4 (lower is better)
Translates to: GWNGLTIAGIYKCPPSPMDWGIR*FDITIC
Trigger: ACAAATGGTGATATCAAAGCAACGTATACCCCAGTC...CATTGGTGAGGGTGGGCACTTATAAATGCCTGCTATTGTTAAGCCATTCCAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp AACTTAGCTTATAAATGGCACAGACTTGTAGGACAAAATCCAGAATTCAGGAGACCGTGTCACGATGATTaGTGTCCCCAGGTGGTGATG +
Preference number: 4 (lower is better)
Translates to: NLAYKWHRLVGQNPEFRRPCHDD*CPQVVM
Trigger: CATCACCACCTGGGGACACCAATCATCGTGACACGG...TCTCCTGAATTCTGGATTTTGTCCTACAAGTCTGTGCCATTTATAAGCTAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CCA 90 bp AACTTAGCTTATAAATGGCACAGACTTGTAGGACAAAATCCAGAATTCAGGAGAGATGGGGGAACTGAGTaGAAGGTGGACTCCGTGTCA +
Preference number: 4 (lower is better)
Translates to: NLAYKWHRLVGQNPEFRRDGGTE*KVDSVS
Trigger: TGACACGGAGTCCACCTTCCACTCAGTTCCCCCATC...TCTCCTGAATTCTGGATTTTGTCCTACAAGTCTGTGCCATTTATAAGCTAAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CCA 90 bp CCAAATCAGAGTATCCTTATAGACCAGGAGATATTCGTGTCTTTTATACCACTCTCACTGAGAAAAGGATaGCTGCCCCCTCAATCCAGC +
Preference number: 4 (lower is better)
Translates to: PNQSILIDQEIFVSFIPLSLRKG*LPPQSS
Trigger: GCTGGATTGAGGGGGCAGCCATCCTTTTCTCAGTGA...GAGTGGTATAAAAGACACGAATATCTCCTGGTCTATAAGGATACTCTGATTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CCA 90 bp AAATGGCACAGACTTGTAGGACAAAATCCAGAATTCAGGAGAGGAACATCGGGGTCACCGTATTTGACTTaGGCAATATCACCAACCACA +
Preference number: 4 (lower is better)
Translates to: KWHRLVGQNPEFRRGTSGSPYLT*AISPTT
Trigger: TGTGGTTGGTGATATTGCCCAAGTCAAATACGGTGA...CCCCGATGTTCCTCTCCTGAATTCTGGATTTTGTCCTACAAGTCTGTGCCATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CCA 90 bp TTGGTTAAAGTGGATGCCACGTGCTCTCTTGTGGTCATTTTAGCAAATCATGCAGGGGGAAGATTTGACTaGTGCAACTGCTACATAGGA +
Preference number: 4 (lower is better)
Translates to: LVKVDATCSLVVILANHAGGRFD*CNCYIG
Trigger: TCCTATGTAGCAGTTGCACCAGTCAAATCTTCCCCC...TGCATGATTTGCTAAAATGACCACAAGAGAGCACGTGGCATCCACTTTAACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356729.5
CDS-3UTR CCA 90 bp TACCACTCTGCCAGCTATTCTTCAAGAAACACAAATCCAACAGAGGCCCCTGATGTTTGTATTGGCATATaGAGTGACCTCACCATCCAA +
Preference number: 4 (lower is better)
Translates to: YHSASYSSRNTNPTEAPDVCIGI*SDLTIQ
Trigger: TTGGATGGTGAGGTCACTCCATATGCCAATACAAAC...ATCAGGGGCCTCTGTTGGATTTGTGTTTCTTGAAGAATAGCTGGCAGAGTGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CCA 90 bp AAAAGTCTAGAACCCAACAATTTTTCTTCCCTAAGTATAAAGATGGCTGTTTGCAGAGAGCTGTCCGACTaGGGGAGCTGCACTTGGTTG +
Preference number: 4 (lower is better)
Translates to: KSLEPNNFSSLSIKMAVCRELSD*GSCTWL
Trigger: CAACCAAGTGCAGCTCCCCCAGTCGGACAGCTCTCT...GCAAACAGCCATCTTTATACTTAGGGAAGAAAAATTGTTGGGTTCTAGACTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp ACTGGGGGAGCTGCACTTGGTTGCAATCCACCGCATTGTTGTTTGTATTGGCATTCATCACCTCATAGATaGGATAGACGAAAATGGAAA +
Preference number: 4 (lower is better)
Translates to: TGGAALGCNPPHCCLYWHSSPHR*DRRKWK
Trigger: TTTCCATTTTCGTCTATCCCATCTATGAGGTGATGA...ATGCCAATACAAACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCCCCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR CCA 90 bp GCTCATCTCCTTCCATCTCTCCTAATCAAGAGCAAAGGGAACAGCAGGCCTAACTCATCACCTCATAGATaGGATAGACGAAAATGGAAA +
Preference number: 4 (lower is better)
Translates to: AHLLPSLLIKSKGNSRPNSSPHR*DRRKWK
Trigger: TTTCCATTTTCGTCTATCCCATCTATGAGGTGATGA...GTTAGGCCTGCTGTTCCCTTTGCTCTTGATTAGGAGAGATGGAAGGAGATGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp GAAGCTGTGGATGGACTTTTGGTTGTAGGGTTTCTGAATGCTTTCGTGGAGGGAGCAACATATTTCACTTaGGGATATTTGTCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: EAVDGLLVVGFLNAFVEGATYFT*GYLSPS
Trigger: AGAGGGAGACAAATATCCCCAAGTGAAATATGTTGC...TCCCTCCACGAAAGCATTCAGAAACCCTACAACCAAAAGTCCATCCACAGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp CCAAATCAGAGTATCCTTATAGACCAGGAGATATTCGTGTCTTTTATACCACTCGCTAGAATGGCTCTTTaGCCTCTCCCAAGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: PNQSILIDQEIFVSFIPLARMAL*PLPRLL
Trigger: CAGAAGCCTTGGGAGAGGCCAAAGAGCCATTCTAGC...GAGTGGTATAAAAGACACGAATATCTCCTGGTCTATAAGGATACTCTGATTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp CATACTGTGATGGTACCACGGGCTGCTTCAATTGTAAGGCAAAGGAAGCAGGAAATTAGAATCAGAAACTaGAGAGAATGTCGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: HTVMVPRAASIVRQRKQEIRIRN*RECRSW
Trigger: CCAGCTTCGACATTCTCTCCAGTTTCTGATTCTAAT...TTCCTGCTTCCTTTGCCTTACAATTGAAGCAGCCCGTGGTACCATCACAGTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp GGAGAAAACATGAACCAAAGGCCAATTCAGTTATGGGAGCTCATCTCCTTCCATATATTTGAGAAAGGCTaGGACCTTCTCAGAGACTGG +
Preference number: 4 (lower is better)
Translates to: GENMNQRPIQLWELISFHIFEKG*DLLRDW
Trigger: CCAGTCTCTGAGAAGGTCCCAGCCTTTCTCAAATAT...ATGGAAGGAGATGAGCTCCCATAACTGAATTGGCCTTTGGTTCATGTTTTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp AGTGAAAGGGCGTCTGGTCTATTCAGAGGAAGAGGCTGGAATGGCTTAACAATAGGACAGATGATACTATaGGAAGGATCTAGCCTTAAG +
Preference number: 4 (lower is better)
Translates to: SERASGLFRGRGWNGLTIGQMIL*EGSSLK
Trigger: CTTAAGGCTAGATCCTTCCCATAGTATCATCTGTCC...TATTGTTAAGCCATTCCAGCCTCTTCCTCTGAATAGACCAGACGCCCTTTCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp TACCACTCTGCCAGCTATTCTTCAAGAAACACAAATCCAACAGAGGCCCCTGATGGACAGATGATACTATaGGAAGGATCTAGCCTTAAG +
Preference number: 4 (lower is better)
Translates to: YHSASYSSRNTNPTEAPDGQMIL*EGSSLK
Trigger: CTTAAGGCTAGATCCTTCCCATAGTATCATCTGTCC...ATCAGGGGCCTCTGTTGGATTTGTGTTTCTTGAAGAATAGCTGGCAGAGTGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp GGAGAAAACATGAACCAAAGGCCAATTCAGTTATGGGAGCTCATCTCCTTCCATAGGAAGAGGCTGGAATaGCTTAACAATAGCAGGCAT +
Preference number: 4 (lower is better)
Translates to: GENMNQRPIQLWELISFHRKRLE*LNNSRH
Trigger: ATGCCTGCTATTGTTAAGCCATTCCAGCCTCTTCCT...ATGGAAGGAGATGAGCTCCCATAACTGAATTGGCCTTTGGTTCATGTTTTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp TTGGTTAAAGTGGATGCCACGTGCTCTCTTGTGGTCATTTTAGCAAATCATGCACATGGTTGGTTAAAGTaGATGCCACGTGCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: LVKVDATCSLVVILANHAHGWLK*MPRALL
Trigger: CAAGAGAGCACGTGGCATCCACTTTAACCAACCATG...TGCATGATTTGCTAAAATGACCACAAGAGAGCACGTGGCATCCACTTTAACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356729.5
CDS-3UTR CCA 90 bp AAATGGCACAGACTTGTAGGACAAAATCCAGAATTCAGGAGAGGAACATCGGGGCATTGTTGTTTGTATTaGCGAATTCAGGGTGGGTCA +
Preference number: 4 (lower is better)
Translates to: KWHRLVGQNPEFRRGTSGHCCLY*RIQGGS
Trigger: TGACCCACCCTGAATTCGCCAATACAAACAACAATG...CCCCGATGTTCCTCTCCTGAATTCTGGATTTTGTCCTACAAGTCTGTGCCATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484746.1
CDS-3UTR TCA 90 bp ATGAAAAATGCAAACCCCAAATCAGAGTATCCTTATAGACCAGGAGATATTCGTAGGCAAGACACGGTCTaGTGGGTTCGTCATTTTGCC +
Preference number: 4 (lower is better)
Translates to: MKNANPKSEYPYRPGDIRRQDTV*WVRHFA
Trigger: GGCAAAATGACGAACCCATCAGACCGTGTCTTGCCT...ACGAATATCTCCTGGTCTATAAGGATACTCTGATTTGGGGTTTGCATTTTTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR TCA 90 bp CTGGCGGATTTTATACATTCCATCTCTACCGCAACATATTTCACTTGGGGATATTATTGGCATATGGAGTaGCCTCACCATCCAACAGGA +
Preference number: 4 (lower is better)
Translates to: LADFIHSISTATYFTWGYYWHME*PHHPTG
Trigger: TCCTGTTGGATGGTGAGGTCACTCCATATGCCAATA...ATATCCCCAAGTGAAATATGTTGCGGTAGAGATGGAATGTATAAAATCCGCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000357681.10
ENST00000367218.7
CDS-3UTR TCA 90 bp AGAAAGCTCAGGCTTTCAGGTAAAAACTGTATACCACACATATGCAACCTTCATGATTCTACCATGACCTaGATGGGGTTTGACTGGGTC +
Preference number: 4 (lower is better)
Translates to: RKLRLSGKNCIPHICNLHDSTMT*MGFDWV
Trigger: GACCCAGTCAAACCCCATTCAGGTCATGGTAGAATC...ATGAAGGTTGCATATGTGTGGTATACAGTTTTTACCTGAAAGCCTGAGCTTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR TCA 90 bp CCAAATCAGAGTATCCTTATAGACCAGGAGATATTCGTGTCTTTTATACCACTCACCTGTCAGGCACCATaGGAACCTTTTGTGAACAGG +
Preference number: 4 (lower is better)
Translates to: PNQSILIDQEIFVSFIPLTCQAP*EPFVNR
Trigger: CCTGTTCACAAAAGGTTCTCATGGTGCCTGACAGGT...GAGTGGTATAAAAGACACGAATATCTCCTGGTCTATAAGGATACTCTGATTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR TCA 90 bp TTTTCAAAATCAGAATATTTGAGAAAGGCTGGGACCTTCTCAGAGACTGGAAAAGAGAGGAAGCTAGGATaGTACGTTCTCCTTCTCCCC +
Preference number: 4 (lower is better)
Translates to: FSKSEYLRKAGTFSETGKERKLG*YVLLLP
Trigger: GGGGAGAAGGAGAACGTATCATCCTAGCTTCCTCTC...TTTTCCAGTCTCTGAGAAGGTCCCAGCCTTTCTCAAATATTCTGATTTTGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR TCA 90 bp AGTGTTATTAACTTATGCCATATTTACCCACTGCCAGTTGGATCAGTGAAACTGGGAAGATTCATTTCCTaGCAGCTGTGTCCCTTGCTG +
Preference number: 4 (lower is better)
Translates to: SVINLCHIYPLPVGSVKLGRFIS*QLCPLL
Trigger: CAGCAAGGGACACAGCTGTCAGGAAATGAATCTTCC...CAGTTTCACTGATCCAACTGGCAGTGGGTAAATATGGCATAAGTTAATAACACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR TCA 90 bp CCAAATCAGAGTATCCTTATAGACCAGGAGATATTCGTGTCTTTTATACCACTCGGAAGATTCATTTCCTaGCAGCTGTGTCCCTTGCTG +
Preference number: 4 (lower is better)
Translates to: PNQSILIDQEIFVSFIPLGRFIS*QLCPLL
Trigger: CAGCAAGGGACACAGCTGTCAGGAAATGAATCTTCC...GAGTGGTATAAAAGACACGAATATCTCCTGGTCTATAAGGATACTCTGATTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR TCA 90 bp CAGAGAAAGAAAATTCAAACTGATGTCTCTAGGCTCTGTAGAGAGCTGTCCGACTATGGGGAGAAAACATaGACCAAAGGCCAATTCAGT +
Preference number: 4 (lower is better)
Translates to: QRKKIQTDVSRLCRELSDYGEKT*TKGQFS
Trigger: ACTGAATTGGCCTTTGGTTCATGTTTTCTCCCCATA...GTCGGACAGCTCTCTACAGAGCCTAGAGACATCAGTTTGAATTTTCTTTCTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367218.7
ENST00000484746.1
CDS-3UTR GCA 90 bp TTTTCAAAATCAGAATATTTGAGAAAGGCTGGGACCTTCTCAGAGACTGGAAAACTGACCAGTGTCTCCTaGCTCCCTGTCTCAACTTCT +
Preference number: 4 (lower is better)
Translates to: FSKSEYLRKAGTFSETGKLTSVS*LPVSTS
Trigger: AGAAGTTGAGACAGGGAGGCAGGAGACACTGGTCAG...TTTTCCAGTCTCTGAGAAGGTCCCAGCCTTTCTCAAATATTCTGATTTTGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR GCA 90 bp CTGGCGGATTTTATACATTCCATCTCTACCGCAACATATTTCACTTGGGGATATGGTTCATGGTCAACGTaGCTGTCTTATCAGAGCAGA +
Preference number: 4 (lower is better)
Translates to: LADFIHSISTATYFTWGYGSWST*LSYQSR
Trigger: TCTGCTCTGATAAGACAGGCACGTTGACCATGAACC...ATATCCCCAAGTGAAATATGTTGCGGTAGAGATGGAATGTATAAAATCCGCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000357681.10
ENST00000367218.7
CDS-3UTR GCA 90 bp TTGTTGTTTGTATTGGCATATGGAGTGACCTCACCATCCAACAGGAGCACCCTATTTGACGGTAATGGATaGCCCCAATATAAGCTTGTA +
Preference number: 4 (lower is better)
Translates to: LLFVLAYGVTSPSNRSTLFDGNG*PQYKLV
Trigger: TACAAGCTTATATTGGGGGCATCCATTACCGTCAAA...TAGGGTGCTCCTGTTGGATGGTGAGGTCACTCCATATGCCAATACAAACAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR GCA 90 bp AAATGGCACAGACTTGTAGGACAAAATCCAGAATTCAGGAGAGGAACATCGGGGAATGAGCTGATAGAATaGATGGCCCAAGATGTTCTT +
Preference number: 4 (lower is better)
Translates to: KWHRLVGQNPEFRRGTSGNELIE*MAQDVL
Trigger: AAGAACATCTTGGGCCATGCATTCTATCAGCTCATT...CCCCGATGTTCCTCTCCTGAATTCTGGATTTTGTCCTACAAGTCTGTGCCATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000357681.10
ENST00000367218.7
CDS-3UTR GCA 90 bp AAAAGTGTTATTAACTTATGCCATATTTACCCACTGCCAGTTGGATCAGTGAAATCTCCTCTTTGGTGGTaGCATGCCCAGCCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: KSVINLCHIYPLPVGSVKSPLWW*HAQPPS
Trigger: TGAAGGAGGCTGGGCATGGCACCACCAAAGAGGAGA...TTTCACTGATCCAACTGGCAGTGGGTAAATATGGCATAAGTTAATAACACTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR GCA 90 bp TACCACTCTGCCAGCTATTCTTCAAGAAACACAAATCCAACAGAGGCCCCTGATCCCAGTTCATTCTTTTaGCACCACTTTAGGAATAAG +
Preference number: 4 (lower is better)
Translates to: YHSASYSSRNTNPTEAPDPSSFF*HHFRNK
Trigger: CTTATTCCTAAAGTGGTGGCAAAAGAATGAACTGGG...ATCAGGGGCCTCTGTTGGATTTGTGTTTCTTGAAGAATAGCTGGCAGAGTGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR GCA 90 bp GCTCATCTCCTTCCATCTCTCCTAATCAAGAGCAAAGGGAACAGCAGGCCTAACAGTGTTATTAACTTATaGCATATTTACCCACTGCCA +
Preference number: 4 (lower is better)
Translates to: AHLLPSLLIKSKGNSRPNSVINL*HIYPLP
Trigger: TGGCAGTGGGTAAATATGGCATAAGTTAATAACACT...GTTAGGCCTGCTGTTCCCTTTGCTCTTGATTAGGAGAGATGGAAGGAGATGAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR GCA 90 bp GAGCCCACAAAAGTCTGCTTTGATGGTCTGTCTTGTCCTAGATTTGGCAGCGTCAGTGTTATTAACTTATaGCATATTTACCCACTGCCA +
Preference number: 4 (lower is better)
Translates to: EPTKVCFDGLSCPRFGSVSVINL*HIYPLP
Trigger: TGGCAGTGGGTAAATATGGCATAAGTTAATAACACT...GACGCTGCCAAATCTAGGACAAGACAGACCATCAAAGCAGACTTTTGTGGGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp TTGGTTAAAGTGGATGCCACGTGCTCTCTTGTGGTCATTTTAGCAAATCATGCAAAAGAGGCTCCCGTCTaGAATGTGTTAATTACGTCG +
Preference number: 4 (lower is better)
Translates to: LVKVDATCSLVVILANHAKEAPV*NVLITS
Trigger: CGACGTAATTAACACATTCCAGACGGGAGCCTCTTT...TGCATGATTTGCTAAAATGACCACAAGAGAGCACGTGGCATCCACTTTAACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356729.5
CDS-3UTR CCA 90 bp CTGGCGGATTTTATACATTCCATCTCTACCGCAACATATTTCACTTGGGGATATGGGGGAAGATTTGACTaGTGCAACTGCTACATAGGA +
Preference number: 4 (lower is better)
Translates to: LADFIHSISTATYFTWGYGGRFD*CNCYIG
Trigger: TCCTATGTAGCAGTTGCACCAGTCAAATCTTCCCCC...ATATCCCCAAGTGAAATATGTTGCGGTAGAGATGGAATGTATAAAATCCGCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp AAAAGTGTTATTAACTTATGCCATATTTACCCACTGCCAGTTGGATCAGTGAAAACATCGGGGAGAATGTaGGGTGGGGTGATGCCAAGA +
Preference number: 4 (lower is better)
Translates to: KSVINLCHIYPLPVGSVKTSGRM*GGVMPR
Trigger: TCTTGGCATCACCCCACCCCACATTCTCCCCGATGT...TTTCACTGATCCAACTGGCAGTGGGTAAATATGGCATAAGTTAATAACACTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp GGGGAGCTGCACTTGGTTGCAATCCACCGCATTGTTGTTTGTATTGGCATATGGAACTTAGCTTATAAATaGCACAGACTTGTAGGACAA +
Preference number: 4 (lower is better)
Translates to: GELHLVAIHRIVVCIGIWNLAYK*HRLVGQ
Trigger: TTGTCCTACAAGTCTGTGCCATTTATAAGCTAAGTT...CCATATGCCAATACAAACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR CCA 90 bp GGCAGGGTCATACCCAGTTCATTCTTTTGCCACCACTTTAGGAATAAGAGAAAGGATACCGATGACAACTaGATCTCTCTCTTTCTAGCA +
Preference number: 4 (lower is better)
Translates to: GRVIPSSFFCHHFRNKRKDTDDN*ISLFLA
Trigger: TGCTAGAAAGAGAGAGATCCAGTTGTCATCGGTATC...CTTTCTCTTATTCCTAAAGTGGTGGCAAAAGAATGAACTGGGTATGACCCTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CCA 90 bp ACTGGGGGAGCTGCACTTGGTTGCAATCCACCGCATTGTTGTTTGTATTGGCATAAAGACAAAGAACTTTaGAGAGGTTTGAATGAAAGG +
Preference number: 4 (lower is better)
Translates to: TGGAALGCNPPHCCLYWHKDKEL*RGLNER
Trigger: CCTTTCATTCAAACCTCTCCAAAGTTCTTTGTCTTT...ATGCCAATACAAACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCCCCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367218.7
CDS-3UTR CCA 90 bp GGAGAAAACATGAACCAAAGGCCAATTCAGTTATGGGAGCTCATCTCCTTCCATAATCAAGGGTTCTTTTaGGCCAAAAGGGAGAAGGAT +
Preference number: 4 (lower is better)
Translates to: GENMNQRPIQLWELISFHNQGFF*AKREKD
Trigger: ATCCTTCTCCCTTTTGGCCCAAAAGAACCCTTGATT...ATGGAAGGAGATGAGCTCCCATAACTGAATTGGCCTTTGGTTCATGTTTTCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp GGCTGGAATGGCTTAACAATAGCAGGCATTTATAAGTGCCCACCCTCACCAATGAAGCAGAAGGTAACCTaGCAACAACAGAGAAATATT +
Preference number: 4 (lower is better)
Translates to: GWNGLTIAGIYKCPPSPMKQKVT*QQQRNI
Trigger: AATATTTCTCTGTTGTTGCCAGGTTACCTTCTGCTT...CATTGGTGAGGGTGGGCACTTATAAATGCCTGCTATTGTTAAGCCATTCCAGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp AAAAGTCTAGAACCCAACAATTTTTCTTCCCTAAGTATAAAGATGGCTGTTTGCGAGCTCCTGCAAACGTaGCTCCACGTTGTCCCAGTA +
Preference number: 4 (lower is better)
Translates to: KSLEPNNFSSLSIKMAVCELLQT*LHVVPV
Trigger: TACTGGGACAACGTGGAGCCACGTTTGCAGGAGCTC...GCAAACAGCCATCTTTATACTTAGGGAAGAAAAATTGTTGGGTTCTAGACTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp TTTTCAAAATCAGAATATTTGAGAAAGGCTGGGACCTTCTCAGAGACTGGAAAACAGCAGGGATACAAATaGAGCTCCTGCAAACGTGGC +
Preference number: 4 (lower is better)
Translates to: FSKSEYLRKAGTFSETGKQQGYK*SSCKRG
Trigger: GCCACGTTTGCAGGAGCTCCATTTGTATCCCTGCTG...TTTTCCAGTCTCTGAGAAGGTCCCAGCCTTTCTCAAATATTCTGATTTTGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp CCAAATCAGAGTATCCTTATAGACCAGGAGATATTCGTGTCTTTTATACCACTCCCAATGCATCGGGGGTaGTCCCTAGATATGAAAGGT +
Preference number: 4 (lower is better)
Translates to: PNQSILIDQEIFVSFIPLPMHRG*SLDMKG
Trigger: ACCTTTCATATCTAGGGACCACCCCCGATGCATTGG...GAGTGGTATAAAAGACACGAATATCTCCTGGTCTATAAGGATACTCTGATTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp AGTGTTATTAACTTATGCCATATTTACCCACTGCCAGTTGGATCAGTGAAACTGCCAATGCATCGGGGGTaGTCCCTAGATATGAAAGGT +
Preference number: 4 (lower is better)
Translates to: SVINLCHIYPLPVGSVKLPMHRG*SLDMKG
Trigger: ACCTTTCATATCTAGGGACCACCCCCGATGCATTGG...CAGTTTCACTGATCCAACTGGCAGTGGGTAAATATGGCATAAGTTAATAACACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp GAGCCCACAAAAGTCTGCTTTGATGGTCTGTCTTGTCCTAGATTTGGCAGCGTCTTCTTCTGGTCTCAGTaGAACAACACATTTGAATTT +
Preference number: 4 (lower is better)
Translates to: EPTKVCFDGLSCPRFGSVFFWSQ*NNTFEF
Trigger: AAATTCAAATGTGTTGTTCCACTGAGACCAGAAGAA...GACGCTGCCAAATCTAGGACAAGACAGACCATCAAAGCAGACTTTTGTGGGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR TCA 90 bp CCAAATCAGAGTATCCTTATAGACCAGGAGATATTCGTGTCTTTTATACCACTCTCTCTGGGGGCCCAGTaGGGGAATAGATTGAATATA +
Preference number: 4 (lower is better)
Translates to: PNQSILIDQEIFVSFIPLSLGAQ*GNRLNI
Trigger: TATATTCAATCTATTCCCTCACTGGGCCCCCAGAGA...GAGTGGTATAAAAGACACGAATATCTCCTGGTCTATAAGGATACTCTGATTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR TCA 90 bp CTGGCGGATTTTATACATTCCATCTCTACCGCAACATATTTCACTTGGGGATATCTCTGTCTTTATTCTTaGATGGCACTGCTTCCCCTT +
Preference number: 4 (lower is better)
Translates to: LADFIHSISTATYFTWGYLCLYS*MALLPL
Trigger: AAGGGGAAGCAGTGCCATTCAAGAATAAAGACAGAG...ATATCCCCAAGTGAAATATGTTGCGGTAGAGATGGAATGTATAAAATCCGCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000357681.10
ENST00000367218.7
CDS-3UTR TCA 90 bp CTGGCGGATTTTATACATTCCATCTCTACCGCAACATATTTCACTTGGGGATATTGTCATCTGTTAGGATaGTGTCTGAAGCCTCCTTTG +
Preference number: 4 (lower is better)
Translates to: LADFIHSISTATYFTWGYCHLLG*CLKPPL
Trigger: CAAAGGAGGCTTCAGACATCATCCTAACAGATGACA...ATATCCCCAAGTGAAATATGTTGCGGTAGAGATGGAATGTATAAAATCCGCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000357681.10
ENST00000367218.7
CDS-3UTR TCA 90 bp AACTTAGCTTATAAATGGCACAGACTTGTAGGACAAAATCCAGAATTCAGGAGAGTTCTCCAATCCCAATaGAGAGACACCACAGCCACT +
Preference number: 4 (lower is better)
Translates to: NLAYKWHRLVGQNPEFRRVLQSQ*RDTTAT
Trigger: AGTGGCTGTGGTGTCTCTTCATTGGGATTGGAGAAC...TCTCCTGAATTCTGGATTTTGTCCTACAAGTCTGTGCCATTTATAAGCTAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000357681.10
ENST00000367218.7
CDS-3UTR TCA 90 bp CCAAAGAGGAGCCCACAAAAGTCTGCTTTGATGGTCTGTCTTGTCCTAGATTTGAAGTCAAGCTTAAGTTaGAATCCTTGTAAGTCTGTG +
Preference number: 4 (lower is better)
Translates to: PKRSPQKSALMVCLVLDLKSSLS*NPCKSV
Trigger: CACAGACTTACAAGGATTTCAACTTAAGCTTGACTT...CAAATCTAGGACAAGACAGACCATCAAAGCAGACTTTTGTGGGCTCCTCTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR TCA 90 bp GGAGAAAACATGAACCAAAGGCCAATTCAGTTATGGGAGCTCATCTCCTTCCATTTCCACAGGGCTACATaGCGGCACTTTATTTTAAAT +
Preference number: 4 (lower is better)
Translates to: GENMNQRPIQLWELISFHFHRAT*RHFILN
Trigger: ATTTAAAATAAAGTGCCGTCATGTAGCCCTGTGGAA...ATGGAAGGAGATGAGCTCCCATAACTGAATTGGCCTTTGGTTCATGTTTTCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR GCA 90 bp TCTGGAACTAAATCAAGGGTTCTTTTGGGCCAAAAGGGAGAAGGATCTAAGTTTTTGTGTCCAAACACCTaGCTACGTTTCTCCAGATCT +
Preference number: 4 (lower is better)
Translates to: SGTKSRVLLGQKGEGSKFLCPNT*LRFSRS
Trigger: AGATCTGGAGAAACGTAGGCAGGTGTTTGGACACAA...AAACTTAGATCCTTCTCCCTTTTGGCCCAAAAGAACCCTTGATTTAGTTCCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR GCA 90 bp TTTTCAAAATCAGAATATTTGAGAAAGGCTGGGACCTTCTCAGAGACTGGAAAACTTGTACCACAGTCATaGGGTTCATGGTCAACGTGC +
Preference number: 4 (lower is better)
Translates to: FSKSEYLRKAGTFSETGKLVPQS*GSWSTC
Trigger: GCACGTTGACCATGAACCGCATGACTGTGGTACAAG...TTTTCCAGTCTCTGAGAAGGTCCCAGCCTTTCTCAAATATTCTGATTTTGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR GCA 90 bp AAAAGTCTAGAACCCAACAATTTTTCTTCCCTAAGTATAAAGATGGCTGTTTGCCCTTTGCTACATCTGTaGCTGCGATGCCCATGGCAA +
Preference number: 4 (lower is better)
Translates to: KSLEPNNFSSLSIKMAVCPLLHL*LRCPWQ
Trigger: TTGCCATGGGCATCGCAGGCACAGATGTAGCAAAGG...GCAAACAGCCATCTTTATACTTAGGGAAGAAAAATTGTTGGGTTCTAGACTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR GCA 90 bp GAAGCTGTGGATGGACTTTTGGTTGTAGGGTTTCTGAATGCTTTCGTGGAGGGATTACCAGCACTTAATTaGTTCAAAAGGACCCTTTTA +
Preference number: 4 (lower is better)
Translates to: EAVDGLLVVGFLNAFVEGLPALN*FKRTLL
Trigger: TAAAAGGGTCCTTTTGAAGCAATTAAGTGCTGGTAA...TCCCTCCACGAAAGCATTCAGAAACCCTACAACCAAAAGTCCATCCACAGCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367218.7
ENST00000484746.1
CDS-3UTR GCA 90 bp ATGAAAAATGCAAACCCCAAATCAGAGTATCCTTATAGACCAGGAGATATTCGTTACAAATGGAGCTCCTaGAAACGTGGCTCCACGTTG +
Preference number: 4 (lower is better)
Translates to: MKNANPKSEYPYRPGDIRYKWSS*KRGSTL
Trigger: CAACGTGGAGCCACGTTTGCAGGAGCTCCATTTGTA...ACGAATATCTCCTGGTCTATAAGGATACTCTGATTTGGGGTTTGCATTTTTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR GCA 90 bp AAAAGTTGTGACACGTGGCAAAAATTAGAATCAGAAACTGGAGAGAATGTCGAATACAAATGGAGCTCCTaGAAACGTGGCTCCACGTTG +
Preference number: 4 (lower is better)
Translates to: KSCDTWQKLESETGENVEYKWSS*KRGSTL
Trigger: CAACGTGGAGCCACGTTTGCAGGAGCTCCATTTGTA...TTCGACATTCTCTCCAGTTTCTGATTCTAATTTTTGCCACGTGTCACAACTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR GCA 90 bp TTTTCAAAATCAGAATATTTGAGAAAGGCTGGGACCTTCTCAGAGACTGGAAAAAAACAGCTGGTTATGTaGTCCCTTCCACAGGGCTAC +
Preference number: 4 (lower is better)
Translates to: FSKSEYLRKAGTFSETGKKQLVM*SLPQGY
Trigger: GTAGCCCTGTGGAAGGGAGCACATAACCAGCTGTTT...TTTTCCAGTCTCTGAGAAGGTCCCAGCCTTTCTCAAATATTCTGATTTTGAAAA
42% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR GCA 90 bp TGCACAGCAGTATTGGTTTCTGTTCATCAGCAAAAAGCTTTATTGGCTCCAACACTAAGTCACCTGTCATaGCAAACAGCTGGTTATGTG +
Preference number: 4 (lower is better)
Translates to: CTAVLVSVHQQKALLAPTLSHLS*QTAGYV
Trigger: CACATAACCAGCTGTTTGGCATGACAGGTGACTTAG...TGTTGGAGCCAATAAAGCTTTTTGCTGATGAACAGAAACCAATACTGCTGTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR GCA 90 bp GCAAAAATTAGAATCAGAAACTGGAGAGAATGTCGAAGCTGGTCCCCAGGCACCAGTGTTATTAACTTATaGCATATTTACCCACTGCCA +
Preference number: 4 (lower is better)
Translates to: AKIRIRNWRECRSWSPGTSVINL*HIYPLP
Trigger: TGGCAGTGGGTAAATATGGCATAAGTTAATAACACT...GGTGCCTGGGGACCAGCTTCGACATTCTCTCCAGTTTCTGATTCTAATTTTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR GCA 90 bp TTCTCAGATCATGCTAGAATGGCTCTTTGGCCTCTCCCAAGGCTTCTGAACACTTCTTTTATACCACTCTaGCAGCTATTCTTCAAGAAA +
Preference number: 4 (lower is better)
Translates to: FSDHARMALWPLPRLLNTSFIPL*QLFFKK
Trigger: TTTCTTGAAGAATAGCTGGCAGAGTGGTATAAAAGA...AGTGTTCAGAAGCCTTGGGAGAGGCCAAAGAGCCATTCTAGCATGATCTGAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR GCA 90 bp CGCATTGTTGTTTGTATTGGCATATGGAGTGACCTCACCATCCAACAGGAGCACACTGTTAAGCTGAATTaGAAATTATGGCAACACACA +
Preference number: 4 (lower is better)
Translates to: RIVVCIGIWSDLTIQQEHTVKLN*KLWQHT
Trigger: TGTGTGTTGCCATAATTTGCAATTCAGCTTAACAGT...GTGCTCCTGTTGGATGGTGAGGTCACTCCATATGCCAATACAAACAACAATGCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367218.7
CDS-3UTR GCA 90 bp GAAGCTGTGGATGGACTTTTGGTTGTAGGGTTTCTGAATGCTTTCGTGGAGGGAACTGTTAAGCTGAATTaGAAATTATGGCAACACACA +
Preference number: 4 (lower is better)
Translates to: EAVDGLLVVGFLNAFVEGTVKLN*KLWQHT
Trigger: TGTGTGTTGCCATAATTTGCAATTCAGCTTAACAGT...TCCCTCCACGAAAGCATTCAGAAACCCTACAACCAAAAGTCCATCCACAGCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp AAAAGTTGTGACACGTGGCAAAAATTAGAATCAGAAACTGGAGAGAATGTCGAAGAACCTTCCATGACATaGGTCCCTGAGAGCAACATG +
Preference number: 4 (lower is better)
Translates to: KSCDTWQKLESETGENVEEPSMT*VPESNM
Trigger: CATGTTGCTCTCAGGGACCCATGTCATGGAAGGTTC...TTCGACATTCTCTCCAGTTTCTGATTCTAATTTTTGCCACGTGTCACAACTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CCA 90 bp AACTTAGCTTATAAATGGCACAGACTTGTAGGACAAAATCCAGAATTCAGGAGAAGTACTGGATGTAGATaGGAGTACACTCAGGGAGCC +
Preference number: 4 (lower is better)
Translates to: NLAYKWHRLVGQNPEFRRSTGCR*EYTQGA
Trigger: GGCTCCCTGAGTGTACTCCCATCTACATCCAGTACT...TCTCCTGAATTCTGGATTTTGTCCTACAAGTCTGTGCCATTTATAAGCTAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CCA 90 bp AACTTAGCTTATAAATGGCACAGACTTGTAGGACAAAATCCAGAATTCAGGAGATGGTATAGTGCTGGCTaGGTGGTGAATGTAGAGGTG +
Preference number: 4 (lower is better)
Translates to: NLAYKWHRLVGQNPEFRRWYSAG*VVNVEV
Trigger: CACCTCTACATTCACCACCCAGCCAGCACTATACCA...TCTCCTGAATTCTGGATTTTGTCCTACAAGTCTGTGCCATTTATAAGCTAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CCA 90 bp AAAAGTCTAGAACCCAACAATTTTTCTTCCCTAAGTATAAAGATGGCTGTTTGCGCAACTCCTCCTCTATaGCGAATTCAGGGTGGGTCA +
Preference number: 4 (lower is better)
Translates to: KSLEPNNFSSLSIKMAVCATPPL*RIQGGS
Trigger: TGACCCACCCTGAATTCGCCATAGAGGAGGAGTTGC...GCAAACAGCCATCTTTATACTTAGGGAAGAAAAATTGTTGGGTTCTAGACTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CCA 90 bp TTCTCAGATCATGCTAGAATGGCTCTTTGGCCTCTCCCAAGGCTTCTGAACACTAACTTAGCTTATAAATaGCACAGACTTGTAGGACAA +
Preference number: 4 (lower is better)
Translates to: FSDHARMALWPLPRLLNTNLAYK*HRLVGQ
Trigger: TTGTCCTACAAGTCTGTGCCATTTATAAGCTAAGTT...AGTGTTCAGAAGCCTTGGGAGAGGCCAAAGAGCCATTCTAGCATGATCTGAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp CCTTGTAAGTCTGTGCTCTTGCCTCTTCATGGTCAGGTAGAGGTTCACTTCACAAAACAATCACACTACTaGCGGATTTTATACATTCCA +
Preference number: 4 (lower is better)
Translates to: PCKSVLLPLHGQVEVHFTKQSHY*RILYIP
Trigger: TGGAATGTATAAAATCCGCCAGTAGTGTGATTGTTT...TGTGAAGTGAACCTCTACCTGACCATGAAGAGGCAAGAGCACAGACTTACAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp TGTCCAGAGGGATTTCTAGGTGATCTCTCTCTTAACCCCTTTAGGGACAGGAGAAAAGACAAAGAACTTTaGAGAGGTTTGAATGAAAGG +
Preference number: 4 (lower is better)
Translates to: CPEGFLGDLSLNPFRDRRKDKEL*RGLNER
Trigger: CCTTTCATTCAAACCTCTCCAAAGTTCTTTGTCTTT...TCTCCTGTCCCTAAAGGGGTTAAGAGAGAGATCACCTAGAAATCCCTCTGGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp CCAAAGAGGAGCCCACAAAAGTCTGCTTTGATGGTCTGTCTTGTCCTAGATTTGAAGCAGAAGGTAACCTaGCAACAACAGAGAAATATT +
Preference number: 4 (lower is better)
Translates to: PKRSPQKSALMVCLVLDLKQKVT*QQQRNI
Trigger: AATATTTCTCTGTTGTTGCCAGGTTACCTTCTGCTT...CAAATCTAGGACAAGACAGACCATCAAAGCAGACTTTTGTGGGCTCCTCTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp AACTTAGCTTATAAATGGCACAGACTTGTAGGACAAAATCCAGAATTCAGGAGACATATGCAACCTTCATaGGCAAGGCTGATCTCCCTG +
Preference number: 4 (lower is better)
Translates to: NLAYKWHRLVGQNPEFRRHMQPS*ARLISL
Trigger: CAGGGAGATCAGCCTTGCCCATGAAGGTTGCATATG...TCTCCTGAATTCTGGATTTTGTCCTACAAGTCTGTGCCATTTATAAGCTAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp ATGAAAAATGCAAACCCCAAATCAGAGTATCCTTATAGACCAGGAGATATTCGTGTCAGGGACATGAACTaGCCCCTACACAGAAGTCAA +
Preference number: 4 (lower is better)
Translates to: MKNANPKSEYPYRPGDIRVRDMN*PLHRSQ
Trigger: TTGACTTCTGTGTAGGGGCCAGTTCATGTCCCTGAC...ACGAATATCTCCTGGTCTATAAGGATACTCTGATTTGGGGTTTGCATTTTTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp AGTGTTATTAACTTATGCCATATTTACCCACTGCCAGTTGGATCAGTGAAACTGTCTCACATGGGAATTTaGCCGTTCATACATCCCCTC +
Preference number: 4 (lower is better)
Translates to: SVINLCHIYPLPVGSVKLSHMGI*PFIHPL
Trigger: GAGGGGATGTATGAACGGCCAAATTCCCATGTGAGA...CAGTTTCACTGATCCAACTGGCAGTGGGTAAATATGGCATAAGTTAATAACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp CTGGCGGATTTTATACATTCCATCTCTACCGCAACATATTTCACTTGGGGATATCATCTTCCTCTCACATaGGAATTTGGCCGTTCATAC +
Preference number: 4 (lower is better)
Translates to: LADFIHSISTATYFTWGYHLPLT*EFGRSY
Trigger: GTATGAACGGCCAAATTCCCATGTGAGAGGAAGATG...ATATCCCCAAGTGAAATATGTTGCGGTAGAGATGGAATGTATAAAATCCGCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp TGCACAGCAGTATTGGTTTCTGTTCATCAGCAAAAAGCTTTATTGGCTCCAACAAGGCCAATTCAGTTATaGGAGCTCATCTCCTTCCAT +
Preference number: 4 (lower is better)
Translates to: CTAVLVSVHQQKALLAPTRPIQL*ELISFH
Trigger: ATGGAAGGAGATGAGCTCCCATAACTGAATTGGCCT...TGTTGGAGCCAATAAAGCTTTTTGCTGATGAACAGAAACCAATACTGCTGTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp ATCCAACAGGAGCACCCTAGTCCCAAACTTAGAAGCCTTGTCAGGATTTTCCTCAGCAAAAAGCTTTATTaGCTCCAACAAATTATCCCT +
Preference number: 4 (lower is better)
Translates to: IQQEHPSPKLRSLVRIFLSKKLY*LQQIIP
Trigger: AGGGATAATTTGTTGGAGCCAATAAAGCTTTTTGCT...GAGGAAAATCCTGACAAGGCTTCTAAGTTTGGGACTAGGGTGCTCCTGTTGGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367218.7
CDS-3UTR CCA 90 bp CAGAGAAAGAAAATTCAAACTGATGTCTCTAGGCTCTGTAGAGAGCTGTCCGACAGTGCACAGCAGTATTaGTTTCTGTTCATCAGCAAA +
Preference number: 4 (lower is better)
Translates to: QRKKIQTDVSRLCRELSDSAQQY*FLFISK
Trigger: TTTGCTGATGAACAGAAACCAATACTGCTGTGCACT...GTCGGACAGCTCTCTACAGAGCCTAGAGACATCAGTTTGAATTTTCTTTCTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367218.7
ENST00000484746.1
CDS-3UTR TCA 90 bp AAAAGTCTAGAACCCAACAATTTTTCTTCCCTAAGTATAAAGATGGCTGTTTGCATCCTTTCTTCCGTATaGAGTCTGGCAGCGAGAGGA +
Preference number: 4 (lower is better)
Translates to: KSLEPNNFSSLSIKMAVCILSSV*SLAARG
Trigger: TCCTCTCGCTGCCAGACTTCATACGGAAGAAAGGAT...GCAAACAGCCATCTTTATACTTAGGGAAGAAAAATTGTTGGGTTCTAGACTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR TCA 90 bp GGCAGGGTCATACCCAGTTCATTCTTTTGCCACCACTTTAGGAATAAGAGAAAGAACTGCTACATAGGATaGACTAGGAACAAGTTTTAC +
Preference number: 4 (lower is better)
Translates to: GRVIPSSFFCHHFRNKRKNCYIG*TRNKFY
Trigger: GTAAAACTTGTTCCTAGTTCATCCTATGTAGCAGTT...CTTTCTCTTATTCCTAAAGTGGTGGCAAAAGAATGAACTGGGTATGACCCTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367218.7
ENST00000484746.1
CDS-3UTR TCA 90 bp GTATTGGTTTCTGTTCATCAGCAAAAAGCTTTATTGGCTCCAACAAATTATCCCCTTCCTGGATACCGATaGCAACTGGATCTCTCTCTT +
Preference number: 4 (lower is better)
Translates to: VLVSVHQQKALLAPTNYPLPGYR*QLDLSL
Trigger: AAGAGAGAGATCCAGTTGTCATCGGTATCCAGGAAG...GGGATAATTTGTTGGAGCCAATAAAGCTTTTTGCTGATGAACAGAAACCAATAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR TCA 90 bp GGAGAAAACATGAACCAAAGGCCAATTCAGTTATGGGAGCTCATCTCCTTCCATGGGTATACGTTGCTTTaGTATCACCATTTGTTTGTT +
Preference number: 4 (lower is better)
Translates to: GENMNQRPIQLWELISFHGYTLL*YHHLFV
Trigger: AACAAACAAATGGTGATATCAAAGCAACGTATACCC...ATGGAAGGAGATGAGCTCCCATAACTGAATTGGCCTTTGGTTCATGTTTTCTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR GCA 90 bp AAAAGTGTTATTAACTTATGCCATATTTACCCACTGCCAGTTGGATCAGTGAAAATTCTTGAATGGCACTaGTTCCCCTTTCCGGTCCAG +
Preference number: 4 (lower is better)
Translates to: KSVINLCHIYPLPVGSVKILEWH*FPFPVQ
Trigger: CTGGACCGGAAAGGGGAAGCAGTGCCATTCAAGAAT...TTTCACTGATCCAACTGGCAGTGGGTAAATATGGCATAAGTTAATAACACTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR GCA 90 bp CCAAAGAGGAGCCCACAAAAGTCTGCTTTGATGGTCTGTCTTGTCCTAGATTTGTCTTTTATACCACTCTaGCAGCTATTCTTCAAGAAA +
Preference number: 4 (lower is better)
Translates to: PKRSPQKSALMVCLVLDLSFIPL*QLFFKK
Trigger: TTTCTTGAAGAATAGCTGGCAGAGTGGTATAAAAGA...CAAATCTAGGACAAGACAGACCATCAAAGCAGACTTTTGTGGGCTCCTCTTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR GCA 90 bp TTTTCAAAATCAGAATATTTGAGAAAGGCTGGGACCTTCTCAGAGACTGGAAAAGCAGGCATTTATAAGTaGCCACCCTCACCAATGCAT +
Preference number: 4 (lower is better)
Translates to: FSKSEYLRKAGTFSETGKAGIYK*PPSPMH
Trigger: ATGCATTGGTGAGGGTGGGCACTTATAAATGCCTGC...TTTTCCAGTCTCTGAGAAGGTCCCAGCCTTTCTCAAATATTCTGATTTTGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR GCA 90 bp AAATGGCACAGACTTGTAGGACAAAATCCAGAATTCAGGAGAGGAACATCGGGGACTGTTAAGCTGAATTaGAAATTATGGCAACACACA +
Preference number: 4 (lower is better)
Translates to: KWHRLVGQNPEFRRGTSGTVKLN*KLWQHT
Trigger: TGTGTGTTGCCATAATTTGCAATTCAGCTTAACAGT...CCCCGATGTTCCTCTCCTGAATTCTGGATTTTGTCCTACAAGTCTGTGCCATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp AGAAAGCTCAGGCTTTCAGGTAAAAACTGTATACCACACATATGCAACCTTCATCTCATTTTCATCTTCTaGGGTAGTTGCGACTTGACC +
Preference number: 4 (lower is better)
Translates to: RKLRLSGKNCIPHICNLHLIFIF*GSCDLT
Trigger: GGTCAAGTCGCAACTACCCCAGAAGATGAAAATGAG...ATGAAGGTTGCATATGTGTGGTATACAGTTTTTACCTGAAAGCCTGAGCTTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CCA 90 bp TCTGGAACTAAATCAAGGGTTCTTTTGGGCCAAAAGGGAGAAGGATCTAAGTTTTTCAGATCATTCCCTTaGATCAGGATTCCATCTGCA +
Preference number: 4 (lower is better)
Translates to: SGTKSRVLLGQKGEGSKFFRSFP*IRIPSA
Trigger: TGCAGATGGAATCCTGATCCAAGGGAATGATCTGAA...AAACTTAGATCCTTCTCCCTTTTGGCCCAAAAGAACCCTTGATTTAGTTCCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CCA 90 bp CCAAATCAGAGTATCCTTATAGACCAGGAGATATTCGTGTCTTTTATACCACTCACACTCAGGGAGCCATaGTCTGCGATTTATCACAAA +
Preference number: 4 (lower is better)
Translates to: PNQSILIDQEIFVSFIPLTLREP*SAIYHK
Trigger: TTTGTGATAAATCGCAGACCATGGCTCCCTGAGTGT...GAGTGGTATAAAAGACACGAATATCTCCTGGTCTATAAGGATACTCTGATTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CCA 90 bp AGTGTTATTAACTTATGCCATATTTACCCACTGCCAGTTGGATCAGTGAAACTGGTCTTTATTCTTGAATaGCACTGCTTCCCCTTTCCG +
Preference number: 4 (lower is better)
Translates to: SVINLCHIYPLPVGSVKLVFILE*HCFPFP
Trigger: CGGAAAGGGGAAGCAGTGCCATTCAAGAATAAAGAC...CAGTTTCACTGATCCAACTGGCAGTGGGTAAATATGGCATAAGTTAATAACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CCA 90 bp AGTGAAAGGGCGTCTGGTCTATTCAGAGGAAGAGGCTGGAATGGCTTAACAATAAAACAATCACACTACTaGCGGATTTTATACATTCCA +
Preference number: 4 (lower is better)
Translates to: SERASGLFRGRGWNGLTIKQSHY*RILYIP
Trigger: TGGAATGTATAAAATCCGCCAGTAGTGTGATTGTTT...TATTGTTAAGCCATTCCAGCCTCTTCCTCTGAATAGACCAGACGCCCTTTCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp AACTTAGCTTATAAATGGCACAGACTTGTAGGACAAAATCCAGAATTCAGGAGAGACCTTCTCAGAGACTaGAAAAGTTGTGACACGTGG +
Preference number: 4 (lower is better)
Translates to: NLAYKWHRLVGQNPEFRRDLLRD*KSCDTW
Trigger: CCACGTGTCACAACTTTTCCAGTCTCTGAGAAGGTC...TCTCCTGAATTCTGGATTTTGTCCTACAAGTCTGTGCCATTTATAAGCTAAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp CTGGCGGATTTTATACATTCCATCTCTACCGCAACATATTTCACTTGGGGATATCTGAATTGCAAATTATaGCAACACACACTGGACTGG +
Preference number: 4 (lower is better)
Translates to: LADFIHSISTATYFTWGYLNCKL*QHTLDW
Trigger: CCAGTCCAGTGTGTGTTGCCATAATTTGCAATTCAG...ATATCCCCAAGTGAAATATGTTGCGGTAGAGATGGAATGTATAAAATCCGCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp CCAAAGAGGAGCCCACAAAAGTCTGCTTTGATGGTCTGTCTTGTCCTAGATTTGAGCAAAAAGCTTTATTaGCTCCAACAAATTATCCCT +
Preference number: 4 (lower is better)
Translates to: PKRSPQKSALMVCLVLDLSKKLY*LQQIIP
Trigger: AGGGATAATTTGTTGGAGCCAATAAAGCTTTTTGCT...CAAATCTAGGACAAGACAGACCATCAAAGCAGACTTTTGTGGGCTCCTCTTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp TTGGTTAAAGTGGATGCCACGTGCTCTCTTGTGGTCATTTTAGCAAATCATGCAAAAGATAACCATGGTTaGTTAAAGTGGATGCCACGT +
Preference number: 4 (lower is better)
Translates to: LVKVDATCSLVVILANHAKDNHG*LKWMPR
Trigger: ACGTGGCATCCACTTTAACCAACCATGGTTATCTTT...TGCATGATTTGCTAAAATGACCACAAGAGAGCACGTGGCATCCACTTTAACCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356729.5
CDS-3UTR TCA 90 bp TTGGTTAAAGTGGATGCCACGTGCTCTCTTGTGGTCATTTTAGCAAATCATGCAAACTGCTACATAGGATaGACTAGGAACAAGTTTTAC +
Preference number: 4 (lower is better)
Translates to: LVKVDATCSLVVILANHANCYIG*TRNKFY
Trigger: GTAAAACTTGTTCCTAGTTCATCCTATGTAGCAGTT...TGCATGATTTGCTAAAATGACCACAAGAGAGCACGTGGCATCCACTTTAACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356729.5
CDS-3UTR TCA 90 bp CTGGCGGATTTTATACATTCCATCTCTACCGCAACATATTTCACTTGGGGATATATATTTGTCTCCCTCTaGACCCTCAACTTAGCTTAT +
Preference number: 4 (lower is better)
Translates to: LADFIHSISTATYFTWGYIFVSL*TLNLAY
Trigger: ATAAGCTAAGTTGAGGGTTCAGAGGGAGACAAATAT...ATATCCCCAAGTGAAATATGTTGCGGTAGAGATGGAATGTATAAAATCCGCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341360.6
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR TCA 90 bp TGCACAGCAGTATTGGTTTCTGTTCATCAGCAAAAAGCTTTATTGGCTCCAACAAGACTGGAAAAGTTGTaGCACGTGGCAAAAATTAGA +
Preference number: 4 (lower is better)
Translates to: CTAVLVSVHQQKALLAPTRLEKL*HVAKIR
Trigger: TCTAATTTTTGCCACGTGTCACAACTTTTCCAGTCT...TGTTGGAGCCAATAAAGCTTTTTGCTGATGAACAGAAACCAATACTGCTGTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR TCA 90 bp AACTTAGCTTATAAATGGCACAGACTTGTAGGACAAAATCCAGAATTCAGGAGACCTAGATATGAAAGGTaGGGAAGTCTCTGCATACTG +
Preference number: 4 (lower is better)
Translates to: NLAYKWHRLVGQNPEFRRPRYER*GSLCIL
Trigger: CAGTATGCAGAGACTTCCTCACCTTTCATATCTAGG...TCTCCTGAATTCTGGATTTTGTCCTACAAGTCTGTGCCATTTATAAGCTAAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR GCA 90 bp AGTGTTATTAACTTATGCCATATTTACCCACTGCCAGTTGGATCAGTGAAACTGAGGTTTTCAGTCTACTaGAGAGATTCTGTACACCTC +
Preference number: 4 (lower is better)
Translates to: SVINLCHIYPLPVGSVKLRFSVY*RDSVHL
Trigger: GAGGTGTACAGAATCTCTGCAGTAGACTGAAAACCT...CAGTTTCACTGATCCAACTGGCAGTGGGTAAATATGGCATAAGTTAATAACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR GCA 90 bp AACTTAGCTTATAAATGGCACAGACTTGTAGGACAAAATCCAGAATTCAGGAGATCCGTCTTGGGTCTTTaGTTTGTTGCGATTTTCAGG +
Preference number: 4 (lower is better)
Translates to: NLAYKWHRLVGQNPEFRRSVLGL*FVAIFR
Trigger: CCTGAAAATCGCAACAAAGCAAAGACCCAAGACGGA...TCTCCTGAATTCTGGATTTTGTCCTACAAGTCTGTGCCATTTATAAGCTAAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000357681.10
ENST00000367218.7
CDS-3UTR GCA 90 bp CCAAATCAGAGTATCCTTATAGACCAGGAGATATTCGTGTCTTTTATACCACTCTCACAAGCATCCAAGTaGCGTACTAGGTTATTGTCT +
Preference number: 4 (lower is better)
Translates to: PNQSILIDQEIFVSFIPLSQASK*RTRLLS
Trigger: AGACAATAACCTAGTACGGCACTTGGATGCTTGTGA...GAGTGGTATAAAAGACACGAATATCTCCTGGTCTATAAGGATACTCTGATTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR GCA 90 bp TCTGGAACTAAATCAAGGGTTCTTTTGGGCCAAAAGGGAGAAGGATCTAAGTTTTTTGACGGTAATGGATaGCCCCAATATAAGCTTGTA +
Preference number: 4 (lower is better)
Translates to: SGTKSRVLLGQKGEGSKFFDGNG*PQYKLV
Trigger: TACAAGCTTATATTGGGGGCATCCATTACCGTCAAA...AAACTTAGATCCTTCTCCCTTTTGGCCCAAAAGAACCCTTGATTTAGTTCCAGA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR GCA 90 bp GTATTGGTTTCTGTTCATCAGCAAAAAGCTTTATTGGCTCCAACAAATTATCCCTGTATACCACACATATaGAACCTTCATGGGCAAGGC +
Preference number: 4 (lower is better)
Translates to: VLVSVHQQKALLAPTNYPCIPHI*NLHGQG
Trigger: GCCTTGCCCATGAAGGTTGCATATGTGTGGTATACA...GGGATAATTTGTTGGAGCCAATAAAGCTTTTTGCTGATGAACAGAAACCAATAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR GCA 90 bp AAAAGTTGTGACACGTGGCAAAAATTAGAATCAGAAACTGGAGAGAATGTCGAATGTATACCACACATATaGAACCTTCATGGGCAAGGC +
Preference number: 4 (lower is better)
Translates to: KSCDTWQKLESETGENVECIPHI*NLHGQG
Trigger: GCCTTGCCCATGAAGGTTGCATATGTGTGGTATACA...TTCGACATTCTCTCCAGTTTCTGATTCTAATTTTTGCCACGTGTCACAACTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp AACTTAGCTTATAAATGGCACAGACTTGTAGGACAAAATCCAGAATTCAGGAGATCCACGATGAAAATCTaGCAGATGAATGTGCCCAAG +
Preference number: 4 (lower is better)
Translates to: NLAYKWHRLVGQNPEFRRSTMKI*QMNVPK
Trigger: CTTGGGCACATTCATCTGCCAGATTTTCATCGTGGA...TCTCCTGAATTCTGGATTTTGTCCTACAAGTCTGTGCCATTTATAAGCTAAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CCA 90 bp TTTTCAAAATCAGAATATTTGAGAAAGGCTGGGACCTTCTCAGAGACTGGAAAAGAAGAAAAGGCTAGGTaGATCAGGTCATCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: FSKSEYLRKAGTFSETGKEEKAR*IRSSSS
Trigger: AGAGGAAGATGACCTGATCCACCTAGCCTTTTCTTC...TTTTCCAGTCTCTGAGAAGGTCCCAGCCTTTCTCAAATATTCTGATTTTGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp AAAAGTTGTGACACGTGGCAAAAATTAGAATCAGAAACTGGAGAGAATGTCGAAAGGAAGAGGCTGGAATaGCTTAACAATAGCAGGCAT +
Preference number: 4 (lower is better)
Translates to: KSCDTWQKLESETGENVERKRLE*LNNSRH
Trigger: ATGCCTGCTATTGTTAAGCCATTCCAGCCTCTTCCT...TTCGACATTCTCTCCAGTTTCTGATTCTAATTTTTGCCACGTGTCACAACTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp ATGAAAAATGCAAACCCCAAATCAGAGTATCCTTATAGACCAGGAGATATTCGTCAACACACACTGGACTaGGGTATACGTTGCTTTGAT +
Preference number: 4 (lower is better)
Translates to: MKNANPKSEYPYRPGDIRQHTLD*GIRCFD
Trigger: ATCAAAGCAACGTATACCCCAGTCCAGTGTGTGTTG...ACGAATATCTCCTGGTCTATAAGGATACTCTGATTTGGGGTTTGCATTTTTCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
3UTR CAA 72 bp GTGGGCATGAGTTTTTATTCTCAGTGCACAGCAGTATaGGTTTCTGTTCATCAGCAAAAAGCTTTATTGGCT +
Preference number: 4 (lower is better)
Translates to: VGMSFYSQCTAV*VSVHQQKALLA
Trigger: AGCCAATAAAGCTTTTTGCTGATGAACAGAAACCAATACTGCTGTGCACTGAGAATAAAAACTCATGCCCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR TCA 90 bp CTGGCGGATTTTATACATTCCATCTCTACCGCAACATATTTCACTTGGGGATATAACTGCTACATAGGATaGACTAGGAACAAGTTTTAC +
Preference number: 4 (lower is better)
Translates to: LADFIHSISTATYFTWGYNCYIG*TRNKFY
Trigger: GTAAAACTTGTTCCTAGTTCATCCTATGTAGCAGTT...ATATCCCCAAGTGAAATATGTTGCGGTAGAGATGGAATGTATAAAATCCGCCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000367218.7
ENST00000484746.1
CDS-3UTR TCA 90 bp CTGGCGGATTTTATACATTCCATCTCTACCGCAACATATTTCACTTGGGGATATAAGTCAAGCTTAAGTTaGAATCCTTGTAAGTCTGTG +
Preference number: 4 (lower is better)
Translates to: LADFIHSISTATYFTWGYKSSLS*NPCKSV
Trigger: CACAGACTTACAAGGATTTCAACTTAAGCTTGACTT...ATATCCCCAAGTGAAATATGTTGCGGTAGAGATGGAATGTATAAAATCCGCCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341360.6
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR TCA 90 bp AAAAGTTGTGACACGTGGCAAAAATTAGAATCAGAAACTGGAGAGAATGTCGAAATTCCAGAGGACAGATaGTACTATGGGAAGGATCTA +
Preference number: 4 (lower is better)
Translates to: KSCDTWQKLESETGENVEIPEDR*YYGKDL
Trigger: TAGATCCTTCCCATAGTATCATCTGTCCTCTGGAAT...TTCGACATTCTCTCCAGTTTCTGATTCTAATTTTTGCCACGTGTCACAACTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp AAAAGTGTTATTAACTTATGCCATATTTACCCACTGCCAGTTGGATCAGTGAAAATATTTGAGAAAGGCTaGGACCTTCTCAGAGACTGG +
Preference number: 4 (lower is better)
Translates to: KSVINLCHIYPLPVGSVKIFEKG*DLLRDW
Trigger: CCAGTCTCTGAGAAGGTCCCAGCCTTTCTCAAATAT...TTTCACTGATCCAACTGGCAGTGGGTAAATATGGCATAAGTTAATAACACTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp AAAAGTCTAGAACCCAACAATTTTTCTTCCCTAAGTATAAAGATGGCTGTTTGCCATCTTCCTCTCACATaGGAATTTGGCCGTTCATAC +
Preference number: 4 (lower is better)
Translates to: KSLEPNNFSSLSIKMAVCHLPLT*EFGRSY
Trigger: GTATGAACGGCCAAATTCCCATGTGAGAGGAAGATG...GCAAACAGCCATCTTTATACTTAGGGAAGAAAAATTGTTGGGTTCTAGACTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp ATGAAAAATGCAAACCCCAAATCAGAGTATCCTTATAGACCAGGAGATATTCGTCTGAATTGCAAATTATaGCAACACACACTGGACTGG +
Preference number: 4 (lower is better)
Translates to: MKNANPKSEYPYRPGDIRLNCKL*QHTLDW
Trigger: CCAGTCCAGTGTGTGTTGCCATAATTTGCAATTCAG...ACGAATATCTCCTGGTCTATAAGGATACTCTGATTTGGGGTTTGCATTTTTCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR TCA 90 bp AGAAAGCTCAGGCTTTCAGGTAAAAACTGTATACCACACATATGCAACCTTCATAAGTCAAGCTTAAGTTaGAATCCTTGTAAGTCTGTG +
Preference number: 4 (lower is better)
Translates to: RKLRLSGKNCIPHICNLHKSSLS*NPCKSV
Trigger: CACAGACTTACAAGGATTTCAACTTAAGCTTGACTT...ATGAAGGTTGCATATGTGTGGTATACAGTTTTTACCTGAAAGCCTGAGCTTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR TCA 90 bp AAAAGTCTAGAACCCAACAATTTTTCTTCCCTAAGTATAAAGATGGCTGTTTGCGGTGCACTGTTAAGCTaGATTGCAAATTATGGCAAC +
Preference number: 4 (lower is better)
Translates to: KSLEPNNFSSLSIKMAVCGALLS*IANYGN
Trigger: GTTGCCATAATTTGCAATTCAGCTTAACAGTGCACC...GCAAACAGCCATCTTTATACTTAGGGAAGAAAAATTGTTGGGTTCTAGACTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR GCA 90 bp AAAAGTTGTGACACGTGGCAAAAATTAGAATCAGAAACTGGAGAGAATGTCGAATTTGACGGTAATGGATaGCCCCAATATAAGCTTGTA +
Preference number: 4 (lower is better)
Translates to: KSCDTWQKLESETGENVEFDGNG*PQYKLV
Trigger: TACAAGCTTATATTGGGGGCATCCATTACCGTCAAA...TTCGACATTCTCTCCAGTTTCTGATTCTAATTTTTGCCACGTGTCACAACTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CCA 90 bp ATGAAAAATGCAAACCCCAAATCAGAGTATCCTTATAGACCAGGAGATATTCGTGCAACATATTTCACTTaGGGATATTTGTCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: MKNANPKSEYPYRPGDIRATYFT*GYLSPS
Trigger: AGAGGGAGACAAATATCCCCAAGTGAAATATGTTGC...ACGAATATCTCCTGGTCTATAAGGATACTCTGATTTGGGGTTTGCATTTTTCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp AGAAAGCTCAGGCTTTCAGGTAAAAACTGTATACCACACATATGCAACCTTCATAAGCAGAAGGTAACCTaGCAACAACAGAGAAATATT +
Preference number: 4 (lower is better)
Translates to: RKLRLSGKNCIPHICNLHKQKVT*QQQRNI
Trigger: AATATTTCTCTGTTGTTGCCAGGTTACCTTCTGCTT...ATGAAGGTTGCATATGTGTGGTATACAGTTTTTACCTGAAAGCCTGAGCTTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp AACTTAGCTTATAAATGGCACAGACTTGTAGGACAAAATCCAGAATTCAGGAGAATTAGAATCAGAAACTaGAGAGAATGTCGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: NLAYKWHRLVGQNPEFRRIRIRN*RECRSW
Trigger: CCAGCTTCGACATTCTCTCCAGTTTCTGATTCTAAT...TCTCCTGAATTCTGGATTTTGTCCTACAAGTCTGTGCCATTTATAAGCTAAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR TCA 90 bp AAAAGTTGTGACACGTGGCAAAAATTAGAATCAGAAACTGGAGAGAATGTCGAAGGGTATACGTTGCTTTaGTATCACCATTTGTTTGTT +
Preference number: 4 (lower is better)
Translates to: KSCDTWQKLESETGENVEGYTLL*YHHLFV
Trigger: AACAAACAAATGGTGATATCAAAGCAACGTATACCC...TTCGACATTCTCTCCAGTTTCTGATTCTAATTTTTGCCACGTGTCACAACTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR GCA 90 bp ATGAAAAATGCAAACCCCAAATCAGAGTATCCTTATAGACCAGGAGATATTCGTATTGAATATATCTTGTaGAATAAGCTCCCGAGTAGC +
Preference number: 4 (lower is better)
Translates to: MKNANPKSEYPYRPGDIRIEYIL*NKLPSS
Trigger: GCTACTCGGGAGCTTATTGCACAAGATATATTCAAT...ACGAATATCTCCTGGTCTATAAGGATACTCTGATTTGGGGTTTGCATTTTTCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR GCA 90 bp AGAAAGCTCAGGCTTTCAGGTAAAAACTGTATACCACACATATGCAACCTTCATTTACCAGCACTTAATTaGTTCAAAAGGACCCTTTTA +
Preference number: 4 (lower is better)
Translates to: RKLRLSGKNCIPHICNLHLPALN*FKRTLL
Trigger: TAAAAGGGTCCTTTTGAAGCAATTAAGTGCTGGTAA...ATGAAGGTTGCATATGTGTGGTATACAGTTTTTACCTGAAAGCCTGAGCTTTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp TTTTCAAAATCAGAATATTTGAGAAAGGCTGGGACCTTCTCAGAGACTGGAAAATCATCACCTCATAGATaGGATAGACGAAAATGGAAA +
Preference number: 4 (lower is better)
Translates to: FSKSEYLRKAGTFSETGKSSPHR*DRRKWK
Trigger: TTTCCATTTTCGTCTATCCCATCTATGAGGTGATGA...TTTTCCAGTCTCTGAGAAGGTCCCAGCCTTTCTCAAATATTCTGATTTTGAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp AACTTAGCTTATAAATGGCACAGACTTGTAGGACAAAATCCAGAATTCAGGAGAAGCAAAAAGCTTTATTaGCTCCAACAAATTATCCCT +
Preference number: 4 (lower is better)
Translates to: NLAYKWHRLVGQNPEFRRSKKLY*LQQIIP
Trigger: AGGGATAATTTGTTGGAGCCAATAAAGCTTTTTGCT...TCTCCTGAATTCTGGATTTTGTCCTACAAGTCTGTGCCATTTATAAGCTAAGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp AAAAGTGTTATTAACTTATGCCATATTTACCCACTGCCAGTTGGATCAGTGAAAAACTTAGCTTATAAATaGCACAGACTTGTAGGACAA +
Preference number: 4 (lower is better)
Translates to: KSVINLCHIYPLPVGSVKNLAYK*HRLVGQ
Trigger: TTGTCCTACAAGTCTGTGCCATTTATAAGCTAAGTT...TTTCACTGATCCAACTGGCAGTGGGTAAATATGGCATAAGTTAATAACACTTTT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CCA 90 bp AAAAGTCTAGAACCCAACAATTTTTCTTCCCTAAGTATAAAGATGGCTGTTTGCAAAGACAAAGAACTTTaGAGAGGTTTGAATGAAAGG +
Preference number: 4 (lower is better)
Translates to: KSLEPNNFSSLSIKMAVCKDKEL*RGLNER
Trigger: CCTTTCATTCAAACCTCTCCAAAGTTCTTTGTCTTT...GCAAACAGCCATCTTTATACTTAGGGAAGAAAAATTGTTGGGTTCTAGACTTTT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS TCA 90 bp GCGGGACTCTCCCTCCGGGTTTCCATGGATGAGGGTAGGGTGGGGTaGCCACCCACCAGTCTCCCCAGTGTGGCAACCAAGCTAGAGACG +
Preference number: 5 (lower is better)
Translates to: AGLSLRVSMDEGRVG*PPTSLPSVATKLET
Trigger: CGTCTCTAGCTTGGTTGCCACACTGGGGAGACTGGTGGGTGGTCACCCCACCCTACCCTCATCCATGGAAACCCGGAGGGAGAGTCCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS CCA 90 bp AAAGATCCAGGTTTCTTCAGGCGGGACTCTCCCTCCGGGTTTCCATaGATGAGGGTAGGGTGGGGTGACCACCCACCAGTCTCCCCAGTG +
Preference number: 5 (lower is better)
Translates to: KDPGFFRRDSPSGFP*MRVGWGDHPPVSPV
Trigger: CACTGGGGAGACTGGTGGGTGGTCACCCCACCCTACCCTCATCCATGGAAACCCGGAGGGAGAGTCCCGCCTGAAGAAACCTGGATCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CAA 90 bp AGGGCTTTACTGGGCAGCAGCTGGAGCATGTGGCTGAAGCGGGGCTGGAGGAAGTTCACCAGGGTGTGCTaGTCAGTGGGAGAAGATCGC +
Preference number: 5 (lower is better)
Translates to: RALLGSSWSMWLKRGWRKFTRVC*SVGEDR
Trigger: GCGATCTTCTCCCACTGACAAGCACACCCTGGTGAA...CTTCCTCCAGCCCCGCTTCAGCCACATGCTCCAGCTGCTGCCCAGTAAAGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CAA 90 bp AGGGCTTTACTGGGCAGCAGCTGGAGCATGTGGCTGAAGCGGGGCTGGAGGAAGCTAGAGACGCTGGCTTaGCTCTCTTGCCTTTCTGGC +
Preference number: 5 (lower is better)
Translates to: RALLGSSWSMWLKRGWRKLETLA*LSCLSG
Trigger: GCCAGAAAGGCAAGAGAGCAAAGCCAGCGTCTCTAG...CTTCCTCCAGCCCCGCTTCAGCCACATGCTCCAGCTGCTGCCCAGTAAAGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CAA 90 bp CCTCCTCTTCCTCATCCAGGAGTGGTGTTCGTGGCAACTCCTCCTCTATGGCGACTCTCGGCCATCGAGTaGGCAGGCAAGACACGGTCT +
Preference number: 5 (lower is better)
Translates to: PPLPHPGVVFVATPPLWRLSAIE*AGKTRS
Trigger: AGACCGTGTCTTGCCTGCCAACTCGATGGCCGAGAG...TCGCCATAGAGGAGGAGTTGCCACGAACACCACTCCTGGATGAGGAAGAGGAGG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS TCA 90 bp CCCTTCACGGCTCTCGGCCATCGAGTTGGCAGGCAAGACACGGTCTaGTGGGTTCGTCATTTTGCCTGCTGTTACCAAGCCCCTCAACCA +
Preference number: 5 (lower is better)
Translates to: PFTALGHRVGRQDTV*WVRHFACCYQAPQP
Trigger: TGGTTGAGGGGCTTGGTAACAGCAGGCAAAATGACGAACCCATCAGACCGTGTCTTGCCTGCCAACTCGATGGCCGAGAGCCGTGAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000357681.10
ENST00000367218.7
CDS CCA 90 bp GGAAGGACCTCTCAGGTTCCTGAAAGAAAAAGGGTGCAGGAGAGCTaGGCGGGTGTCTCTGATCTTGCTCTCTTCGGAGGGATGGTGCCC +
Preference number: 5 (lower is better)
Translates to: GRTSQVPERKRVQES*AGVSDLALFGGMVP
Trigger: GGGCACCATCCCTCCGAAGAGAGCAAGATCAGAGACACCCGCCCAGCTCTCCTGCACCCTTTTTCTTTCAGGAACCTGAGAGGTCCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CAA 90 bp GAGTGGTGTTCGTGGCAACTCCTCCTCTATGGCGAATTCAGGGTGGGTCATGAAGCCAGGCGAGTCAGCTaGCCCTGCAGCACTGACTTC +
Preference number: 5 (lower is better)
Translates to: EWCSWQLLLYGEFRVGHEARRVS*PCSTDF
Trigger: GAAGTCAGTGCTGCAGGGCAAGCTGACTCGCCTGGC...TTCATGACCCACCCTGAATTCGCCATAGAGGAGGAGTTGCCACGAACACCACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR CAA 90 bp CCTCTCCCAAGGCTTCTGAACACTCATTCCCCACCAGTCAGGTCCTGCCCTGGAGGGAGCTGCACTTGGTaGCAATCCACCGCATTGTTG +
Preference number: 5 (lower is better)
Translates to: PLPRLLNTHSPPVRSCPGGSCTW*QSTALL
Trigger: CAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCC...TCCAGGGCAGGACCTGACTGGTGGGGAATGAGTGTTCAGAAGCCTTGGGAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CAA 90 bp AGGGCTTTACTGGGCAGCAGCTGGAGCATGTGGCTGAAGCGGGGCTGGAGGAAGTGTCTTGTCCTAGATTaGGCAGCGTCTGGTCCTCAA +
Preference number: 5 (lower is better)
Translates to: RALLGSSWSMWLKRGWRKCLVLD*AASGPQ
Trigger: TTGAGGACCAGACGCTGCCAAATCTAGGACAAGACA...CTTCCTCCAGCCCCGCTTCAGCCACATGCTCCAGCTGCTGCCCAGTAAAGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS CCA 90 bp TTACTGTGCAGCCAAAGTCCCCTTCACGGCTCTCGGCCATCGAGTTaGCAGGCAAGACACGGTCTGATGGGTTCGTCATTTTGCCTGCTG +
Preference number: 5 (lower is better)
Translates to: LLCSQSPLHGSRPSS*QARHGLMGSSFCLL
Trigger: CAGCAGGCAAAATGACGAACCCATCAGACCGTGTCTTGCCTGCCAACTCGATGGCCGAGAGCCGTGAAGGGGACTTTGGCTGCACAGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CAA 90 bp AGCTGTCCGACTGGGGGAGCTGCACTTGGTTGCAATCCACCGCATTGTTGTTTGCAGGGCCACTCCGTCTaGGGTCTTTGCTTTGTTGCG +
Preference number: 5 (lower is better)
Translates to: SCPTGGAALGCNPPHCCLQGHSV*GLCFVA
Trigger: CGCAACAAAGCAAAGACCCAAGACGGAGTGGCCCTG...CAAACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCCCCAGTCGGACAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS CCA 90 bp CTAGGGCTGCCCATCAGTAGTGAGCCTTTGGAAGGGAAGAGATGCTaGCCGACAAGAACTGCTACCCTCCCAACACCTTCCAAGATGGGA +
Preference number: 5 (lower is better)
Translates to: LGLPISSEPLEGKRC*PTRTATLPTPSKMG
Trigger: TCCCATCTTGGAAGGTGTTGGGAGGGTAGCAGTTCTTGTCGGCCAGCATCTCTTCCCTTCCAAAGGCTCACTACTGATGGGCAGCCCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466407.1
CDS-3UTR CAA 90 bp GCAGGCATTTATAAGTGCCCACCCTCACCAATGCATCGGGGGTGGTCCCTAGATTTCACCAGGGTGTGCTaGTCAGTGGGAGAAGATCGC +
Preference number: 5 (lower is better)
Translates to: AGIYKCPPSPMHRGWSLDFTRVC*SVGEDR
Trigger: GCGATCTTCTCCCACTGACAAGCACACCCTGGTGAA...ATCTAGGGACCACCCCCGATGCATTGGTGAGGGTGGGCACTTATAAATGCCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CAA 90 bp GACCTCACCATCCAACAGGAGCACCCTAGTCCCAAACTTAGAAGCCTTGTCAGGGCTGGCTTTGCTCTCTaGCCTTTCTGGCTAAGGCCG +
Preference number: 5 (lower is better)
Translates to: DLTIQQEHPSPKLRSLVRAGFAL*PFWLRP
Trigger: CGGCCTTAGCCAGAAAGGCAAGAGAGCAAAGCCAGC...CCTGACAAGGCTTCTAAGTTTGGGACTAGGGTGCTCCTGTTGGATGGTGAGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367218.7
CDS GCA 90 bp GATCTAGGGCTGCCCATCAGTAGTGAGCCTTTGGAAGGGAAGAGATaGTGGCCGACAAGAACTGCTACCCTCCCAACACCTTCCAAGATG +
Preference number: 5 (lower is better)
Translates to: DLGLPISSEPLEGKR*WPTRTATLPTPSKM
Trigger: CATCTTGGAAGGTGTTGGGAGGGTAGCAGTTCTTGTCGGCCAGCATCTCTTCCCTTCCAAAGGCTCACTACTGATGGGCAGCCCTAGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466407.1
CDS-3UTR CAA 90 bp GACCTCACCATCCAACAGGAGCACCCTAGTCCCAAACTTAGAAGCCTTGTCAGGATTCCCTCCTGGCTGTaGAGTGGCTGGATTTCCAGG +
Preference number: 5 (lower is better)
Translates to: DLTIQQEHPSPKLRSLVRIPSWL*SGWISR
Trigger: CCTGGAAATCCAGCCACTCAACAGCCAGGAGGGAAT...CCTGACAAGGCTTCTAAGTTTGGGACTAGGGTGCTCCTGTTGGATGGTGAGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR CAA 90 bp TCTCCCAAGGCTTCTGAACACTCATTCCCCACCAGTCAGGTCCTGCCCTGGAGATTGTCCTTTTCCTCATaGTCGATTCCCTCCTGGCTG +
Preference number: 5 (lower is better)
Translates to: SPKASEHSFPTSQVLPWRLSFSS*SIPSWL
Trigger: CAGCCAGGAGGGAATCGACAATGAGGAAAAGGACAA...TCTCCAGGGCAGGACCTGACTGGTGGGGAATGAGTGTTCAGAAGCCTTGGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CAA 90 bp TGGGGGAGCTGCACTTGGTTGCAATCCACCGCATTGTTGTTTGTATTGGCATATGCCAGGCGAGTCAGCTaGCCCTGCAGCACTGACTTC +
Preference number: 5 (lower is better)
Translates to: WGSCTWLQSTALLFVLAYARRVS*PCSTDF
Trigger: GAAGTCAGTGCTGCAGGGCAAGCTGACTCGCCTGGC...ATATGCCAATACAAACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR CAA 90 bp CCTCCTCTTCCTCATCCAGGAGTGGTGTTCGTGGCAACTCCTCCTCTATGGCGAACGGTGCTCATTGACTaGCGCACTGAGTTAAAGGTG +
Preference number: 5 (lower is better)
Translates to: PPLPHPGVVFVATPPLWRTVLID*RTELKV
Trigger: CACCTTTAACTCAGTGCGCAAGTCAATGAGCACCGT...TCGCCATAGAGGAGGAGTTGCCACGAACACCACTCCTGGATGAGGAAGAGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR CAA 90 bp GACCTCACCATCCAACAGGAGCACCCTAGTCCCAAACTTAGAAGCCTTGTCAGGATACGGAAGCCACCGTaGGGATTCCTGATGACGGTG +
Preference number: 5 (lower is better)
Translates to: DLTIQQEHPSPKLRSLVRIRKPP*GFLMTV
Trigger: CACCGTCATCAGGAATCCCAACGGTGGCTTCCGTAT...CCTGACAAGGCTTCTAAGTTTGGGACTAGGGTGCTCCTGTTGGATGGTGAGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR CAA 90 bp TGGCAACTCCTCCTCTATGGCGAATTCAGGGTGGGTCATGAAGCTGTGGATGGAAGTCCCTCGGCATCCTaGGTGATCTCCTCTTTGGTG +
Preference number: 5 (lower is better)
Translates to: WQLLLYGEFRVGHEAVDGSPSAS*VISSLV
Trigger: CACCAAAGAGGAGATCACCAAGGATGCCGAGGGACT...TCCATCCACAGCTTCATGACCCACCCTGAATTCGCCATAGAGGAGGAGTTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR CAA 90 bp TGGCAACTCCTCCTCTATGGCGAATTCAGGGTGGGTCATGAAGCTGTGGATGGAGGGAGCTGCACTTGGTaGCAATCCACCGCATTGTTG +
Preference number: 5 (lower is better)
Translates to: WQLLLYGEFRVGHEAVDGGSCTW*QSTALL
Trigger: CAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCC...TCCATCCACAGCTTCATGACCCACCCTGAATTCGCCATAGAGGAGGAGTTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR CAA 90 bp GAGCTGTCCGACTGGGGGAGCTGCACTTGGTTGCAATCCACCGCATTGTTGTTTTGGGAAGGGGATGCTTaGGGCAGTATTCAGGGGAAA +
Preference number: 5 (lower is better)
Translates to: ELSDWGSCTWLQSTALLFWEGDA*GSIQGK
Trigger: TTTCCCCTGAATACTGCCCAAAGCATCCCCTTCCCA...AAACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCCCCAGTCGGACAGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000367218.7
ENST00000484746.1
CDS GCA 90 bp CCGACAAGAACTGCTACCCTCCCAACACCTTCCAAGATGGGAAGCTaGTTCTCCCAAGGGAAGGACAGACCACTATCAGAGTACCTGAGT +
Preference number: 5 (lower is better)
Translates to: PTRTATLPTPSKMGS*FSQGKDRPLSEYLS
Trigger: ACTCAGGTACTCTGATAGTGGTCTGTCCTTCCCTTGGGAGAAGCAGCTTCCCATCTTGGAAGGTGTTGGGAGGGTAGCAGTTCTTGTCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466407.1
CDS-3UTR CAA 90 bp TGGCAACTCCTCCTCTATGGCGAATTCAGGGTGGGTCATGAAGCTGTGGATGGAGATGGGTTCGTCATTTaGCCTGCTGTTACCAAGCCC +
Preference number: 5 (lower is better)
Translates to: WQLLLYGEFRVGHEAVDGDGFVI*PAVTKP
Trigger: GGGCTTGGTAACAGCAGGCAAAATGACGAACCCATC...TCCATCCACAGCTTCATGACCCACCCTGAATTCGCCATAGAGGAGGAGTTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR CAA 90 bp TTCCTCATCCAGGAGTGGTGTTCGTGGCAACTCCTCCTCTATGGCGAATTCAGGAGGGAGCTGGATGAGTaGACCGTTTCGGATGATGGA +
Preference number: 5 (lower is better)
Translates to: FLIQEWCSWQLLLYGEFRRELDE*TVSDDG
Trigger: TCCATCATCCGAAACGGTCAACTCATCCAGCTCCCT...CCTGAATTCGCCATAGAGGAGGAGTTGCCACGAACACCACTCCTGGATGAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR CAA 90 bp GAGCCTTGGCAGATGGCTTTGAAAGCAGTGGTCACCCCAAAGAGGAGCCCACAATTGTCCAGGGACTTCTaGACATGGTCAGATTCCCCT +
Preference number: 5 (lower is better)
Translates to: EPWQMALKAVVTPKRSPQLSRDF*TWSDSP
Trigger: AGGGGAATCTGACCATGTCAAGAAGTCCCTGGACAA...TTGTGGGCTCCTCTTTGGGGTGACCACTGCTTTCAAAGCCATCTGCCAAGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CAA 90 bp GAGCTGTCCGACTGGGGGAGCTGCACTTGGTTGCAATCCACCGCATTGTTGTTTGGAAGACATCAGGGCTaGGGATTTGACGGTAATGGA +
Preference number: 5 (lower is better)
Translates to: ELSDWGSCTWLQSTALLFGRHQG*GFDGNG
Trigger: TCCATTACCGTCAAATCCCAAGCCCTGATGTCTTCC...AAACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCCCCAGTCGGACAGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR CAA 90 bp GCAGGCATTTATAAGTGCCCACCCTCACCAATGCATCGGGGGTGGTCCCTAGATGGAAGACATCAGGGCTaGGGATTTGACGGTAATGGA +
Preference number: 5 (lower is better)
Translates to: AGIYKCPPSPMHRGWSLDGRHQG*GFDGNG
Trigger: TCCATTACCGTCAAATCCCAAGCCCTGATGTCTTCC...ATCTAGGGACCACCCCCGATGCATTGGTGAGGGTGGGCACTTATAAATGCCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CAA 90 bp CCTGAATGGGGTTTGACTGGGTCCCGCTACAAACCCCAAGTCAAGCTTAAGTTGATGAGGTCCAGGACTTaGGGCAGGAAGACATCAGGG +
Preference number: 5 (lower is better)
Translates to: PEWGLTGSRYKPQVKLKLMRSRT*GRKTSG
Trigger: CCCTGATGTCTTCCTGCCCAAAGTCCTGGACCTCAT...CAACTTAAGCTTGACTTGGGGTTTGTAGCGGGACCCAGTCAAACCCCATTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CAA 90 bp ATCCAGGAGTGGTGTTCGTGGCAACTCCTCCTCTATGGCGAATTCAGGGTGGGTCCAGCTTGTTTGCATTaGGCAATAGCATCTGGCACC +
Preference number: 5 (lower is better)
Translates to: IQEWCSWQLLLYGEFRVGPACLH*AIASGT
Trigger: GGTGCCAGATGCTATTGCCAAATGCAAACAAGCTGG...ACCCACCCTGAATTCGCCATAGAGGAGGAGTTGCCACGAACACCACTCCTGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR CAA 90 bp CCTGAATGGGGTTTGACTGGGTCCCGCTACAAACCCCAAGTCAAGCTTAAGTTGTTCACCAGGGTGTGCTaGTCAGTGGGAGAAGATCGC +
Preference number: 5 (lower is better)
Translates to: PEWGLTGSRYKPQVKLKLFTRVC*SVGEDR
Trigger: GCGATCTTCTCCCACTGACAAGCACACCCTGGTGAA...CAACTTAAGCTTGACTTGGGGTTTGTAGCGGGACCCAGTCAAACCCCATTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CAA 90 bp CCTCTCCCAAGGCTTCTGAACACTCATTCCCCACCAGTCAGGTCCTGCCCTGGACCAAACTTAGAAGCCTaGTCAGGATTTTCCTCCTCT +
Preference number: 5 (lower is better)
Translates to: PLPRLLNTHSPPVRSCPGPNLEA*SGFSSS
Trigger: AGAGGAGGAAAATCCTGACAAGGCTTCTAAGTTTGG...TCCAGGGCAGGACCTGACTGGTGGGGAATGAGTGTTCAGAAGCCTTGGGAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CAA 90 bp ACTGGGGGAGCTGCACTTGGTTGCAATCCACCGCATTGTTGTTTGTATTGGCATCTGGGGGAGCTGCACTaGGTTGCAATCCACCGCATT +
Preference number: 5 (lower is better)
Translates to: TGGAALGCNPPHCCLYWHLGELH*VAIHRI
Trigger: AATGCGGTGGATTGCAACCAAGTGCAGCTCCCCCAG...ATGCCAATACAAACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCCCCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR CAA 90 bp GAGCCCACAAAAGTCTGCTTTGATGGTCTGTCTTGTCCTAGATTTGGCAGCGTCCTGGGGGAGCTGCACTaGGTTGCAATCCACCGCATT +
Preference number: 5 (lower is better)
Translates to: EPTKVCFDGLSCPRFGSVLGELH*VAIHRI
Trigger: AATGCGGTGGATTGCAACCAAGTGCAGCTCCCCCAG...GACGCTGCCAAATCTAGGACAAGACAGACCATCAAAGCAGACTTTTGTGGGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CAA 90 bp GAGGAAGTCTCTGCATACTGTGATGGTACCACGGGCTGCTTCAATTGTAAGGCACTGGGGGAGCTGCACTaGGTTGCAATCCACCGCATT +
Preference number: 5 (lower is better)
Translates to: EEVSAYCDGTTGCFNCKALGELH*VAIHRI
Trigger: AATGCGGTGGATTGCAACCAAGTGCAGCTCCCCCAG...TGCCTTACAATTGAAGCAGCCCGTGGTACCATCACAGTATGCAGAGACTTCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CAA 90 bp TCTCCCAAGGCTTCTGAACACTCATTCCCCACCAGTCAGGTCCTGCCCTGGAGATTCACTTGGGGATATTaGTCTCCCTCTGAACCCTCA +
Preference number: 5 (lower is better)
Translates to: SPKASEHSFPTSQVLPWRFTWGY*SPSEPS
Trigger: TGAGGGTTCAGAGGGAGACAAATATCCCCAAGTGAA...TCTCCAGGGCAGGACCTGACTGGTGGGGAATGAGTGTTCAGAAGCCTTGGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CAA 90 bp CCTCTCCCAAGGCTTCTGAACACTCATTCCCCACCAGTCAGGTCCTGCCCTGGACGCAACATATTTCACTaGGGGATATTTGTCTCCCTC +
Preference number: 5 (lower is better)
Translates to: PLPRLLNTHSPPVRSCPGRNIFH*GIFVSL
Trigger: GAGGGAGACAAATATCCCCAAGTGAAATATGTTGCG...TCCAGGGCAGGACCTGACTGGTGGGGAATGAGTGTTCAGAAGCCTTGGGAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CAA 90 bp GCTCATCTCCTTCCATCTCTCCTAATCAAGAGCAAAGGGAACAGCAGGCCTAACCTGCCCTGGAGAGCCTaGGCAGATGGCTTTGAAAGC +
Preference number: 5 (lower is better)
Translates to: AHLLPSLLIKSKGNSRPNLPWRA*ADGFES
Trigger: GCTTTCAAAGCCATCTGCCAAGGCTCTCCAGGGCAG...GTTAGGCCTGCTGTTCCCTTTGCTCTTGATTAGGAGAGATGGAAGGAGATGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CAA 90 bp AGGGCTTTACTGGGCAGCAGCTGGAGCATGTGGCTGAAGCGGGGCTGGAGGAAGTCAAAATCAGAATATTaGAGAAAGGCTGGGACCTTC +
Preference number: 5 (lower is better)
Translates to: RALLGSSWSMWLKRGWRKSKSEY*RKAGTF
Trigger: GAAGGTCCCAGCCTTTCTCAAATATTCTGATTTTGA...CTTCCTCCAGCCCCGCTTCAGCCACATGCTCCAGCTGCTGCCCAGTAAAGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CAA 90 bp GCTCATCTCCTTCCATCTCTCCTAATCAAGAGCAAAGGGAACAGCAGGCCTAACGGCCTAACAGCAGGGTaGGGAAGGCAAAAGGACTGG +
Preference number: 5 (lower is better)
Translates to: AHLLPSLLIKSKGNSRPNGLTAG*GRQKDW
Trigger: CCAGTCCTTTTGCCTTCCCAACCCTGCTGTTAGGCC...GTTAGGCCTGCTGTTCCCTTTGCTCTTGATTAGGAGAGATGGAAGGAGATGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS GCA 90 bp CCATCGAGTTGGCAGGCAAGACACGGTCTGATGGGTTCGTCATTTTaGCTGCTGTTACCAAGCCCCTCAACCAGAGAAGATGTAGCGTTT +
Preference number: 5 (lower is better)
Translates to: PSSWQARHGLMGSSF*LLLPSPSTREDVAF
Trigger: AAACGCTACATCTTCTCTGGTTGAGGGGCTTGGTAACAGCAGGCAAAATGACGAACCCATCAGACCGTGTCTTGCCTGCCAACTCGATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000357681.10
ENST00000367218.7
CDS CCA 90 bp TTGTCCTTTTCCTCATTGTCGATTCCCTCCTGGCTGTTGAGTGGCTaGATTTCCAGGGCCACTCCGTCTTGGGTCTTTGCTTTGTTGCGA +
Preference number: 5 (lower is better)
Translates to: LSFSSLSIPSWLLSG*ISRATPSWVFALLR
Trigger: TCGCAACAAAGCAAAGACCCAAGACGGAGTGGCCCTGGAAATCCAGCCACTCAACAGCCAGGAGGGAATCGACAATGAGGAAAAGGACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CAA 90 bp CCTGAATGGGGTTTGACTGGGTCCCGCTACAAACCCCAAGTCAAGCTTAAGTTGGATGGGTTCGTCATTTaGCCTGCTGTTACCAAGCCC +
Preference number: 5 (lower is better)
Translates to: PEWGLTGSRYKPQVKLKLDGFVI*PAVTKP
Trigger: GGGCTTGGTAACAGCAGGCAAAATGACGAACCCATC...CAACTTAAGCTTGACTTGGGGTTTGTAGCGGGACCCAGTCAAACCCCATTCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CAA 90 bp AATCTCCTAGCAAAGTCCCCAACTCCTGAGAGGCAGATGGGAAGGGGATGCTTTAGGGAGCTGGATGAGTaGACCGTTTCGGATGATGGA +
Preference number: 5 (lower is better)
Translates to: NLLAKSPTPERQMGRGCFRELDE*TVSDDG
Trigger: TCCATCATCCGAAACGGTCAACTCATCCAGCTCCCT...AAAGCATCCCCTTCCCATCTGCCTCTCAGGAGTTGGGGACTTTGCTAGGAGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CAA 90 bp GAGCTGTCCGACTGGGGGAGCTGCACTTGGTTGCAATCCACCGCATTGTTGTTTCTCCGTCTTGGGTCTTaGCTTTGTTGCGATTTTCAG +
Preference number: 5 (lower is better)
Translates to: ELSDWGSCTWLQSTALLFLRLGS*LCCDFQ
Trigger: CTGAAAATCGCAACAAAGCAAAGACCCAAGACGGAG...AAACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCCCCAGTCGGACAGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR CAA 90 bp TTCTCAGATCATGCTAGAATGGCTCTTTGGCCTCTCCCAAGGCTTCTGAACACTCAGGGCCACTCCGTCTaGGGTCTTTGCTTTGTTGCG +
Preference number: 5 (lower is better)
Translates to: FSDHARMALWPLPRLLNTQGHSV*GLCFVA
Trigger: CGCAACAAAGCAAAGACCCAAGACGGAGTGGCCCTG...AGTGTTCAGAAGCCTTGGGAGAGGCCAAAGAGCCATTCTAGCATGATCTGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CAA 90 bp GAGCCCACAAAAGTCTGCTTTGATGGTCTGTCTTGTCCTAGATTTGGCAGCGTCATTCCCTCCTGGCTGTaGAGTGGCTGGATTTCCAGG +
Preference number: 5 (lower is better)
Translates to: EPTKVCFDGLSCPRFGSVIPSWL*SGWISR
Trigger: CCTGGAAATCCAGCCACTCAACAGCCAGGAGGGAAT...GACGCTGCCAAATCTAGGACAAGACAGACCATCAAAGCAGACTTTTGTGGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CAA 90 bp TGGCAACTCCTCCTCTATGGCGAATTCAGGGTGGGTCATGAAGCTGTGGATGGATTGTCCTTTTCCTCATaGTCGATTCCCTCCTGGCTG +
Preference number: 5 (lower is better)
Translates to: WQLLLYGEFRVGHEAVDGLSFSS*SIPSWL
Trigger: CAGCCAGGAGGGAATCGACAATGAGGAAAAGGACAA...TCCATCCACAGCTTCATGACCCACCCTGAATTCGCCATAGAGGAGGAGTTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR CAA 90 bp ATCCAGGAGTGGTGTTCGTGGCAACTCCTCCTCTATGGCGAATTCAGGGTGGGTACCTTGACTGCCTTCTaGTCCTTTTCCTCATTGTCG +
Preference number: 5 (lower is better)
Translates to: IQEWCSWQLLLYGEFRVGTLTAF*SFSSLS
Trigger: CGACAATGAGGAAAAGGACAAGAAGGCAGTCAAGGT...ACCCACCCTGAATTCGCCATAGAGGAGGAGTTGCCACGAACACCACTCCTGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR CAA 90 bp GACCTCACCATCCAACAGGAGCACCCTAGTCCCAAACTTAGAAGCCTTGTCAGGGCCCCCAATATAAGCTaGTACCACAGTCATGCGGTT +
Preference number: 5 (lower is better)
Translates to: DLTIQQEHPSPKLRSLVRAPNIS*YHSHAV
Trigger: AACCGCATGACTGTGGTACAAGCTTATATTGGGGGC...CCTGACAAGGCTTCTAAGTTTGGGACTAGGGTGCTCCTGTTGGATGGTGAGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR CAA 90 bp GCTCATCTCCTTCCATCTCTCCTAATCAAGAGCAAAGGGAACAGCAGGCCTAACATACGGAAGCCACCGTaGGGATTCCTGATGACGGTG +
Preference number: 5 (lower is better)
Translates to: AHLLPSLLIKSKGNSRPNIRKPP*GFLMTV
Trigger: CACCGTCATCAGGAATCCCAACGGTGGCTTCCGTAT...GTTAGGCCTGCTGTTCCCTTTGCTCTTGATTAGGAGAGATGGAAGGAGATGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CAA 90 bp GAGCTGTCCGACTGGGGGAGCTGCACTTGGTTGCAATCCACCGCATTGTTGTTTAGCCGGTTGAATTCTTaGCCTTCTAAGCACAGGAAG +
Preference number: 5 (lower is better)
Translates to: ELSDWGSCTWLQSTALLFSRLNS*PSKHRK
Trigger: CTTCCTGTGCTTAGAAGGCAAAGAATTCAACCGGCT...AAACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCCCCAGTCGGACAGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR CAA 90 bp TGGGGGAGCTGCACTTGGTTGCAATCCACCGCATTGTTGTTTGTATTGGCATATTTGGTGATCTCCTCTTaGGTGGTGCCATGCCCAGCC +
Preference number: 5 (lower is better)
Translates to: WGSCTWLQSTALLFVLAYLVISS*VVPCPA
Trigger: GGCTGGGCATGGCACCACCAAAGAGGAGATCACCAA...ATATGCCAATACAAACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR CAA 90 bp ATGCAACCTTCATGGGCAAGGCTGATCTCCCTGGCACTTAAGAACCACATACACGGGAGCTGCACTTGGTaGCAATCCACCGCATTGTTG +
Preference number: 5 (lower is better)
Translates to: MQPSWARLISLALKNHIHGSCTW*QSTALL
Trigger: CAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCC...GTGTATGTGGTTCTTAAGTGCCAGGGAGATCAGCCTTGCCCATGAAGGTTGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CAA 90 bp GCAAAAATTAGAATCAGAAACTGGAGAGAATGTCGAAGCTGGTCCCCAGGCACCTCCCAGCCCCCAGCTTaGGACGATCTCAACAGCAGA +
Preference number: 5 (lower is better)
Translates to: AKIRIRNWRECRSWSPGTSQPPA*DDLNSR
Trigger: TCTGCTGTTGAGATCGTCCAAAGCTGGGGGCTGGGA...GGTGCCTGGGGACCAGCTTCGACATTCTCTCCAGTTTCTGATTCTAATTTTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CAA 90 bp CATACTGTGATGGTACCACGGGCTGCTTCAATTGTAAGGCAAAGGAAGCAGGAACGGGTGTCTCTGATCTaGCTCTCTTCGGAGGGATGG +
Preference number: 5 (lower is better)
Translates to: HTVMVPRAASIVRQRKQERVSLI*LSSEGW
Trigger: CCATCCCTCCGAAGAGAGCAAGATCAGAGACACCCG...TTCCTGCTTCCTTTGCCTTACAATTGAAGCAGCCCGTGGTACCATCACAGTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CAA 90 bp TTCTCAGATCATGCTAGAATGGCTCTTTGGCCTCTCCCAAGGCTTCTGAACACTGCTGGCTTTGCTCTCTaGCCTTTCTGGCTAAGGCCG +
Preference number: 5 (lower is better)
Translates to: FSDHARMALWPLPRLLNTAGFAL*PFWLRP
Trigger: CGGCCTTAGCCAGAAAGGCAAGAGAGCAAAGCCAGC...AGTGTTCAGAAGCCTTGGGAGAGGCCAAAGAGCCATTCTAGCATGATCTGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CAA 90 bp GCAGGCATTTATAAGTGCCCACCCTCACCAATGCATCGGGGGTGGTCCCTAGATCCACCGCATTGTTGTTaGTATTGGCGAATTCAGGGT +
Preference number: 5 (lower is better)
Translates to: AGIYKCPPSPMHRGWSLDPPHCC*YWRIQG
Trigger: ACCCTGAATTCGCCAATACAAACAACAATGCGGTGG...ATCTAGGGACCACCCCCGATGCATTGGTGAGGGTGGGCACTTATAAATGCCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484746.1
CDS TCA 90 bp CCCCACAGAAGTTCTCCAATCCCAATGAAGAGACACCACAGCCACTaGGACAGGCTGAGGCTTGTACAACTGAAGGGTTTACCCCCAAAT +
Preference number: 5 (lower is better)
Translates to: PHRSSPIPMKRHHSH*DRLRLVQLKGLPPN
Trigger: ATTTGGGGGTAAACCCTTCAGTTGTACAAGCCTCAGCCTGTCTCAGTGGCTGTGGTGTCTCTTCATTGGGATTGGAGAACTTCTGTGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000357681.10
ENST00000367218.7
CDS CCA 90 bp CTTCTTGTCCTTTTCCTCATTGTCGATTCCCTCCTGGCTGTTGAGTaGCTGGATTTCCAGGGCCACTCCGTCTTGGGTCTTTGCTTTGTT +
Preference number: 5 (lower is better)
Translates to: LLVLFLIVDSLLAVE*LDFQGHSVLGLCFV
Trigger: AACAAAGCAAAGACCCAAGACGGAGTGGCCCTGGAAATCCAGCCACTCAACAGCCAGGAGGGAATCGACAATGAGGAAAAGGACAAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CAA 90 bp ATGCAACCTTCATGGGCAAGGCTGATCTCCCTGGCACTTAAGAACCACATACACACTTCTTCCTACTTCTaGCTTCTCTGGGGGCCCAGT +
Preference number: 5 (lower is better)
Translates to: MQPSWARLISLALKNHIHTSSYF*LLWGPS
Trigger: ACTGGGCCCCCAGAGAAGCAAGAAGTAGGAAGAAGT...GTGTATGTGGTTCTTAAGTGCCAGGGAGATCAGCCTTGCCCATGAAGGTTGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CAA 90 bp CAGAGAAAGAAAATTCAAACTGATGTCTCTAGGCTCTGTAGAGAGCTGTCCGACCTCTCGGCCATCGAGTaGGCAGGCAAGACACGGTCT +
Preference number: 5 (lower is better)
Translates to: QRKKIQTDVSRLCRELSDLSAIE*AGKTRS
Trigger: AGACCGTGTCTTGCCTGCCAACTCGATGGCCGAGAG...GTCGGACAGCTCTCTACAGAGCCTAGAGACATCAGTTTGAATTTTCTTTCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR CAA 90 bp TGGCAACTCCTCCTCTATGGCGAATTCAGGGTGGGTCATGAAGCTGTGGATGGAGATGATGGAGAACTTTaGCTCCTGTTCAATGCGGCA +
Preference number: 5 (lower is better)
Translates to: WQLLLYGEFRVGHEAVDGDDGEL*LLFNAA
Trigger: TGCCGCATTGAACAGGAGCAAAAGTTCTCCATCATC...TCCATCCACAGCTTCATGACCCACCCTGAATTCGCCATAGAGGAGGAGTTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR CAA 90 bp ATGGCTTTGAAAGCAGTGGTCACCCCAAAGAGGAGCCCACAAAAGTCTGCTTTGAGGGAGCTGGATGAGTaGACCGTTTCGGATGATGGA +
Preference number: 5 (lower is better)
Translates to: MALKAVVTPKRSPQKSALRELDE*TVSDDG
Trigger: TCCATCATCCGAAACGGTCAACTCATCCAGCTCCCT...CAAAGCAGACTTTTGTGGGCTCCTCTTTGGGGTGACCACTGCTTTCAAAGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CAA 90 bp ATGGCTTTGAAAGCAGTGGTCACCCCAAAGAGGAGCCCACAAAAGTCTGCTTTGCCTTCGTCATCCTCATaGACCCCCAAGAGAGTAAGG +
Preference number: 5 (lower is better)
Translates to: MALKAVVTPKRSPQKSALPSSSS*TPKRVR
Trigger: CCTTACTCTCTTGGGGGTCAATGAGGATGACGAAGG...CAAAGCAGACTTTTGTGGGCTCCTCTTTGGGGTGACCACTGCTTTCAAAGCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CAA 90 bp TGTCCAGAGGGATTTCTAGGTGATCTCTCTCTTAACCCCTTTAGGGACAGGAGAATTCCCTCCTGGCTGTaGAGTGGCTGGATTTCCAGG +
Preference number: 5 (lower is better)
Translates to: CPEGFLGDLSLNPFRDRRIPSWL*SGWISR
Trigger: CCTGGAAATCCAGCCACTCAACAGCCAGGAGGGAAT...TCTCCTGTCCCTAAAGGGGTTAAGAGAGAGATCACCTAGAAATCCCTCTGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CAA 90 bp CCTGAATGGGGTTTGACTGGGTCCCGCTACAAACCCCAAGTCAAGCTTAAGTTGGCCCCCAATATAAGCTaGTACCACAGTCATGCGGTT +
Preference number: 5 (lower is better)
Translates to: PEWGLTGSRYKPQVKLKLAPNIS*YHSHAV
Trigger: AACCGCATGACTGTGGTACAAGCTTATATTGGGGGC...CAACTTAAGCTTGACTTGGGGTTTGTAGCGGGACCCAGTCAAACCCCATTCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CAA 90 bp ACCCCAAAGAGGAGCCCACAAAAGTCTGCTTTGATGGTCTGTCTTGTCCTAGATATCAGGGCTTGGGATTaGACGGTAATGGATGCCCCC +
Preference number: 5 (lower is better)
Translates to: TPKRSPQKSALMVCLVLDIRAWD*TVMDAP
Trigger: GGGGGCATCCATTACCGTCAAATCCCAAGCCCTGAT...ATCTAGGACAAGACAGACCATCAAAGCAGACTTTTGTGGGCTCCTCTTTGGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CAA 90 bp AAAGTCTGCTTTGATGGTCTGTCTTGTCCTAGATTTGGCAGCGTCTGGTCCTCAATGAGGTCCAGGACTTaGGGCAGGAAGACATCAGGG +
Preference number: 5 (lower is better)
Translates to: KVCFDGLSCPRFGSVWSSMRSRT*GRKTSG
Trigger: CCCTGATGTCTTCCTGCCCAAAGTCCTGGACCTCAT...TGAGGACCAGACGCTGCCAAATCTAGGACAAGACAGACCATCAAAGCAGACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CAA 90 bp GAGCTGTCCGACTGGGGGAGCTGCACTTGGTTGCAATCCACCGCATTGTTGTTTTCTCTGTCTTTATTCTaGAATGGCACTGCTTCCCCT +
Preference number: 5 (lower is better)
Translates to: ELSDWGSCTWLQSTALLFSLSLF*NGTASP
Trigger: AGGGGAAGCAGTGCCATTCAAGAATAAAGACAGAGA...AAACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCCCCAGTCGGACAGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR CAA 90 bp AATCTCCTAGCAAAGTCCCCAACTCCTGAGAGGCAGATGGGAAGGGGATGCTTTCCAGCTTGTTTGCATTaGGCAATAGCATCTGGCACC +
Preference number: 5 (lower is better)
Translates to: NLLAKSPTPERQMGRGCFPACLH*AIASGT
Trigger: GGTGCCAGATGCTATTGCCAAATGCAAACAAGCTGG...AAAGCATCCCCTTCCCATCTGCCTCTCAGGAGTTGGGGACTTTGCTAGGAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CAA 90 bp CCTCCTCTTCCTCATCCAGGAGTGGTGTTCGTGGCAACTCCTCCTCTATGGCGAGTAATGCCAGCTTGTTaGCATTTGGCAATAGCATCT +
Preference number: 5 (lower is better)
Translates to: PPLPHPGVVFVATPPLWRVMPAC*HLAIAS
Trigger: AGATGCTATTGCCAAATGCAAACAAGCTGGCATTAC...TCGCCATAGAGGAGGAGTTGCCACGAACACCACTCCTGGATGAGGAAGAGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR CAA 90 bp CACAGACTTGTAGGACAAAATCCAGAATTCAGGAGAGGAACATCGGGGAGAATGTTGGTGATCTCCTCTTaGGTGGTGCCATGCCCAGCC +
Preference number: 5 (lower is better)
Translates to: HRLVGQNPEFRRGTSGRMLVISS*VVPCPA
Trigger: GGCTGGGCATGGCACCACCAAAGAGGAGATCACCAA...CATTCTCCCCGATGTTCCTCTCCTGAATTCTGGATTTTGTCCTACAAGTCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CAA 90 bp TGTCCAGAGGGATTTCTAGGTGATCTCTCTCTTAACCCCTTTAGGGACAGGAGAAGTCCCTCGGCATCCTaGGTGATCTCCTCTTTGGTG +
Preference number: 5 (lower is better)
Translates to: CPEGFLGDLSLNPFRDRRSPSAS*VISSLV
Trigger: CACCAAAGAGGAGATCACCAAGGATGCCGAGGGACT...TCTCCTGTCCCTAAAGGGGTTAAGAGAGAGATCACCTAGAAATCCCTCTGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CAA 90 bp GAGCCTTGGCAGATGGCTTTGAAAGCAGTGGTCACCCCAAAGAGGAGCCCACAAGCTGTGGATGGACTTTaGGTTGTAGGGTTTCTGAAT +
Preference number: 5 (lower is better)
Translates to: EPWQMALKAVVTPKRSPQAVDGL*VVGFLN
Trigger: ATTCAGAAACCCTACAACCAAAAGTCCATCCACAGC...TTGTGGGCTCCTCTTTGGGGTGACCACTGCTTTCAAAGCCATCTGCCAAGGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CAA 90 bp GCAGGCATTTATAAGTGCCCACCCTCACCAATGCATCGGGGGTGGTCCCTAGATCCAAACTTAGAAGCCTaGTCAGGATTTTCCTCCTCT +
Preference number: 5 (lower is better)
Translates to: AGIYKCPPSPMHRGWSLDPNLEA*SGFSSS
Trigger: AGAGGAGGAAAATCCTGACAAGGCTTCTAAGTTTGG...ATCTAGGGACCACCCCCGATGCATTGGTGAGGGTGGGCACTTATAAATGCCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CAA 90 bp CACAGACTTGTAGGACAAAATCCAGAATTCAGGAGAGGAACATCGGGGAGAATGCGGGTGTCTCTGATCTaGCTCTCTTCGGAGGGATGG +
Preference number: 5 (lower is better)
Translates to: HRLVGQNPEFRRGTSGRMRVSLI*LSSEGW
Trigger: CCATCCCTCCGAAGAGAGCAAGATCAGAGACACCCG...CATTCTCCCCGATGTTCCTCTCCTGAATTCTGGATTTTGTCCTACAAGTCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CAA 90 bp ACCCCAAAGAGGAGCCCACAAAAGTCTGCTTTGATGGTCTGTCTTGTCCTAGATCTAGAGACGCTGGCTTaGCTCTCTTGCCTTTCTGGC +
Preference number: 5 (lower is better)
Translates to: TPKRSPQKSALMVCLVLDLETLA*LSCLSG
Trigger: GCCAGAAAGGCAAGAGAGCAAAGCCAGCGTCTCTAG...ATCTAGGACAAGACAGACCATCAAAGCAGACTTTTGTGGGCTCCTCTTTGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CAA 90 bp GAAACTGGAGAGAATGTCGAAGCTGGTCCCCAGGCACCTAAGCTCAAGGTTTCTCTCTCACATGGGAATTaGGCCGTTCATACATCCCCT +
Preference number: 5 (lower is better)
Translates to: ETGENVEAGPQAPKLKVSLSHGN*AVHTSP
Trigger: AGGGGATGTATGAACGGCCAAATTCCCATGTGAGAG...AGAAACCTTGAGCTTAGGTGCCTGGGGACCAGCTTCGACATTCTCTCCAGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS GCA 90 bp CTTTGGGCAGGAAGACATCAGGGCTTGGGATTTGACGGTAATGGATaGCCCCAATATAAGCTTGTACCACAGTCATGCGGTTCATGGTCA +
Preference number: 5 (lower is better)
Translates to: LWAGRHQGLGFDGNG*PQYKLVPQSCGSWS
Trigger: TGACCATGAACCGCATGACTGTGGTACAAGCTTATATTGGGGGCATCCATTACCGTCAAATCCCAAGCCCTGATGTCTTCCTGCCCAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CAA 90 bp TCTTTATGTTTCCTACTGTGGACAGCTCAGGTGAAAGGGGTGAGGGAGGACAGATTGTCCAGGGACTTCTaGACATGGTCAGATTCCCCT +
Preference number: 5 (lower is better)
Translates to: SLCFLLWTAQVKGVREDRLSRDF*TWSDSP
Trigger: AGGGGAATCTGACCATGTCAAGAAGTCCCTGGACAA...TCTGTCCTCCCTCACCCCTTTCACCTGAGCTGTCCACAGTAGGAAACATAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CAA 90 bp TGGGGGAGCTGCACTTGGTTGCAATCCACCGCATTGTTGTTTGTATTGGCATATCCTTCGTCATCCTCATaGACCCCCAAGAGAGTAAGG +
Preference number: 5 (lower is better)
Translates to: WGSCTWLQSTALLFVLAYPSSSS*TPKRVR
Trigger: CCTTACTCTCTTGGGGGTCAATGAGGATGACGAAGG...ATATGCCAATACAAACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR CAA 90 bp CAGAGAAAGAAAATTCAAACTGATGTCTCTAGGCTCTGTAGAGAGCTGTCCGACCAGGGCCACTCCGTCTaGGGTCTTTGCTTTGTTGCG +
Preference number: 5 (lower is better)
Translates to: QRKKIQTDVSRLCRELSDQGHSV*GLCFVA
Trigger: CGCAACAAAGCAAAGACCCAAGACGGAGTGGCCCTG...GTCGGACAGCTCTCTACAGAGCCTAGAGACATCAGTTTGAATTTTCTTTCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR CAA 90 bp AAATGGCACAGACTTGTAGGACAAAATCCAGAATTCAGGAGAGGAACATCGGGGATGAGGTCCAGGACTTaGGGCAGGAAGACATCAGGG +
Preference number: 5 (lower is better)
Translates to: KWHRLVGQNPEFRRGTSGMRSRT*GRKTSG
Trigger: CCCTGATGTCTTCCTGCCCAAAGTCCTGGACCTCAT...CCCCGATGTTCCTCTCCTGAATTCTGGATTTTGTCCTACAAGTCTGTGCCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CAA 90 bp TACCACTCTGCCAGCTATTCTTCAAGAAACACAAATCCAACAGAGGCCCCTGATATACGGAAGCCACCGTaGGGATTCCTGATGACGGTG +
Preference number: 5 (lower is better)
Translates to: YHSASYSSRNTNPTEAPDIRKPP*GFLMTV
Trigger: CACCGTCATCAGGAATCCCAACGGTGGCTTCCGTAT...ATCAGGGGCCTCTGTTGGATTTGTGTTTCTTGAAGAATAGCTGGCAGAGTGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CAA 90 bp TTCCTCATCCAGGAGTGGTGTTCGTGGCAACTCCTCCTCTATGGCGAATTCAGGGACAGTAATGCCAGCTaGTTTGCATTTGGCAATAGC +
Preference number: 5 (lower is better)
Translates to: FLIQEWCSWQLLLYGEFRDSNAS*FAFGNS
Trigger: GCTATTGCCAAATGCAAACAAGCTGGCATTACTGTC...CCTGAATTCGCCATAGAGGAGGAGTTGCCACGAACACCACTCCTGGATGAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR CAA 90 bp GGCTGGAATGGCTTAACAATAGCAGGCATTTATAAGTGCCCACCCTCACCAATGTGTCTGAAGCCTCCTTaGCTACATCTGTGCCTGCGA +
Preference number: 5 (lower is better)
Translates to: GWNGLTIAGIYKCPPSPMCLKPP*LHLCLR
Trigger: TCGCAGGCACAGATGTAGCAAAGGAGGCTTCAGACA...CATTGGTGAGGGTGGGCACTTATAAATGCCTGCTATTGTTAAGCCATTCCAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CAA 90 bp GTGATCTCTCTCTTAACCCCTTTAGGGACAGGAGAGTCATTCCAGAGGACAGATTGTCTGAAGCCTCCTTaGCTACATCTGTGCCTGCGA +
Preference number: 5 (lower is better)
Translates to: VISLLTPLGTGESFQRTDCLKPP*LHLCLR
Trigger: TCGCAGGCACAGATGTAGCAAAGGAGGCTTCAGACA...ATCTGTCCTCTGGAATGACTCTCCTGTCCCTAAAGGGGTTAAGAGAGAGATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CAA 90 bp CAGAGAAAGAAAATTCAAACTGATGTCTCTAGGCTCTGTAGAGAGCTGTCCGACTTGGTGATCTCCTCTTaGGTGGTGCCATGCCCAGCC +
Preference number: 5 (lower is better)
Translates to: QRKKIQTDVSRLCRELSDLVISS*VVPCPA
Trigger: GGCTGGGCATGGCACCACCAAAGAGGAGATCACCAA...GTCGGACAGCTCTCTACAGAGCCTAGAGACATCAGTTTGAATTTTCTTTCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR CAA 90 bp GAGTGGTGTTCGTGGCAACTCCTCCTCTATGGCGAATTCAGGGTGGGTCATGAATTTTACATCAAGGTGTaGACCCATGTTCTGTCGCCT +
Preference number: 5 (lower is better)
Translates to: EWCSWQLLLYGEFRVGHEFYIKV*THVLSP
Trigger: AGGCGACAGAACATGGGTCAACACCTTGATGTAAAA...TTCATGACCCACCCTGAATTCGCCATAGAGGAGGAGTTGCCACGAACACCACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR CAA 90 bp GGGGAGCTGCACTTGGTTGCAATCCACCGCATTGTTGTTTGTATTGGCATATGGTGTCTTGTCCTAGATTaGGCAGCGTCTGGTCCTCAA +
Preference number: 5 (lower is better)
Translates to: GELHLVAIHRIVVCIGIWCLVLD*AASGPQ
Trigger: TTGAGGACCAGACGCTGCCAAATCTAGGACAAGACA...CCATATGCCAATACAAACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367218.7
CDS-3UTR CAA 90 bp TTCTTTATGTTTCCTACTGTGGACAGCTCAGGTGAAAGGGGTGAGGGAGGACAGTGTCTTGTCCTAGATTaGGCAGCGTCTGGTCCTCAA +
Preference number: 5 (lower is better)
Translates to: FFMFPTVDSSGERGEGGQCLVLD*AASGPQ
Trigger: TTGAGGACCAGACGCTGCCAAATCTAGGACAAGACA...CTGTCCTCCCTCACCCCTTTCACCTGAGCTGTCCACAGTAGGAAACATAAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CAA 90 bp TGGCAACTCCTCCTCTATGGCGAATTCAGGGTGGGTCATGAAGCTGTGGATGGACCACAAAAGTCTGCTTaGATGGTCTGTCTTGTCCTA +
Preference number: 5 (lower is better)
Translates to: WQLLLYGEFRVGHEAVDGPQKSA*MVCLVL
Trigger: TAGGACAAGACAGACCATCAAAGCAGACTTTTGTGG...TCCATCCACAGCTTCATGACCCACCCTGAATTCGCCATAGAGGAGGAGTTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367218.7
CDS-3UTR CAA 90 bp CCTTGTAAGTCTGTGCTCTTGCCTCTTCATGGTCAGGTAGAGGTTCACTTCACATGGGAAGGGGATGCTTaGGGCAGTATTCAGGGGAAA +
Preference number: 5 (lower is better)
Translates to: PCKSVLLPLHGQVEVHFTWEGDA*GSIQGK
Trigger: TTTCCCCTGAATACTGCCCAAAGCATCCCCTTCCCA...TGTGAAGTGAACCTCTACCTGACCATGAAGAGGCAAGAGCACAGACTTACAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CAA 90 bp ACCCCAAAGAGGAGCCCACAAAAGTCTGCTTTGATGGTCTGTCTTGTCCTAGATTGGGAAGGGGATGCTTaGGGCAGTATTCAGGGGAAA +
Preference number: 5 (lower is better)
Translates to: TPKRSPQKSALMVCLVLDWEGDA*GSIQGK
Trigger: TTTCCCCTGAATACTGCCCAAAGCATCCCCTTCCCA...ATCTAGGACAAGACAGACCATCAAAGCAGACTTTTGTGGGCTCCTCTTTGGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS CCA 90 bp ATTGACAATGAGGTCCAGGACTTTGGGCAGGAAGACATCAGGGCTTaGGATTTGACGGTAATGGATGCCCCCAATATAAGCTTGTACCAC +
Preference number: 5 (lower is better)
Translates to: IDNEVQDFGQEDIRA*DLTVMDAPNISLYH
Trigger: GTGGTACAAGCTTATATTGGGGGCATCCATTACCGTCAAATCCCAAGCCCTGATGTCTTCCTGCCCAAAGTCCTGGACCTCATTGTCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CAA 90 bp AAATGGCACAGACTTGTAGGACAAAATCCAGAATTCAGGAGAGGAACATCGGGGACTTCTTCCTACTTCTaGCTTCTCTGGGGGCCCAGT +
Preference number: 5 (lower is better)
Translates to: KWHRLVGQNPEFRRGTSGTSSYF*LLWGPS
Trigger: ACTGGGCCCCCAGAGAAGCAAGAAGTAGGAAGAAGT...CCCCGATGTTCCTCTCCTGAATTCTGGATTTTGTCCTACAAGTCTGTGCCATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CAA 90 bp TACCACTCTGCCAGCTATTCTTCAAGAAACACAAATCCAACAGAGGCCCCTGATACTTCTTCCTACTTCTaGCTTCTCTGGGGGCCCAGT +
Preference number: 5 (lower is better)
Translates to: YHSASYSSRNTNPTEAPDTSSYF*LLWGPS
Trigger: ACTGGGCCCCCAGAGAAGCAAGAAGTAGGAAGAAGT...ATCAGGGGCCTCTGTTGGATTTGTGTTTCTTGAAGAATAGCTGGCAGAGTGGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CAA 90 bp GAGGAAGTCTCTGCATACTGTGATGGTACCACGGGCTGCTTCAATTGTAAGGCACTCAATCCAGCCAGCTaGTGCCTCATTTTCATCTTC +
Preference number: 5 (lower is better)
Translates to: EEVSAYCDGTTGCFNCKALNPAS*CLIFIF
Trigger: GAAGATGAAAATGAGGCACAAGCTGGCTGGATTGAG...TGCCTTACAATTGAAGCAGCCCGTGGTACCATCACAGTATGCAGAGACTTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CAA 90 bp AAATGGCACAGACTTGTAGGACAAAATCCAGAATTCAGGAGAGGAACATCGGGGCCTTCGTCATCCTCATaGACCCCCAAGAGAGTAAGG +
Preference number: 5 (lower is better)
Translates to: KWHRLVGQNPEFRRGTSGPSSSS*TPKRVR
Trigger: CCTTACTCTCTTGGGGGTCAATGAGGATGACGAAGG...CCCCGATGTTCCTCTCCTGAATTCTGGATTTTGTCCTACAAGTCTGTGCCATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CAA 90 bp ACTGGGGGAGCTGCACTTGGTTGCAATCCACCGCATTGTTGTTTGTATTGGCATTGGGTCTTTGCTTTGTaGCGATTTTCAGGGACTCCT +
Preference number: 5 (lower is better)
Translates to: TGGAALGCNPPHCCLYWHWVFAL*RFSGTP
Trigger: AGGAGTCCCTGAAAATCGCAACAAAGCAAAGACCCA...ATGCCAATACAAACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCCCCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR CAA 90 bp GAGGAAGTCTCTGCATACTGTGATGGTACCACGGGCTGCTTCAATTGTAAGGCACTCCGTCTTGGGTCTTaGCTTTGTTGCGATTTTCAG +
Preference number: 5 (lower is better)
Translates to: EEVSAYCDGTTGCFNCKALRLGS*LCCDFQ
Trigger: CTGAAAATCGCAACAAAGCAAAGACCCAAGACGGAG...TGCCTTACAATTGAAGCAGCCCGTGGTACCATCACAGTATGCAGAGACTTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CAA 90 bp GGCAGGGTCATACCCAGTTCATTCTTTTGCCACCACTTTAGGAATAAGAGAAAGATCAGGGCTTGGGATTaGACGGTAATGGATGCCCCC +
Preference number: 5 (lower is better)
Translates to: GRVIPSSFFCHHFRNKRKIRAWD*TVMDAP
Trigger: GGGGGCATCCATTACCGTCAAATCCCAAGCCCTGAT...CTTTCTCTTATTCCTAAAGTGGTGGCAAAAGAATGAACTGGGTATGACCCTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CAA 90 bp GAGTGGTGTTCGTGGCAACTCCTCCTCTATGGCGAATTCAGGGTGGGTCATGAAGTAATGCCAGCTTGTTaGCATTTGGCAATAGCATCT +
Preference number: 5 (lower is better)
Translates to: EWCSWQLLLYGEFRVGHEVMPAC*HLAIAS
Trigger: AGATGCTATTGCCAAATGCAAACAAGCTGGCATTAC...TTCATGACCCACCCTGAATTCGCCATAGAGGAGGAGTTGCCACGAACACCACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR CAA 90 bp GAGGAAGTCTCTGCATACTGTGATGGTACCACGGGCTGCTTCAATTGTAAGGCATTGCGGATGAGCCGGTaGAATTCTTTGCCTTCTAAG +
Preference number: 5 (lower is better)
Translates to: EEVSAYCDGTTGCFNCKALRMSR*NSLPSK
Trigger: CTTAGAAGGCAAAGAATTCAACCGGCTCATCCGCAA...TGCCTTACAATTGAAGCAGCCCGTGGTACCATCACAGTATGCAGAGACTTCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CAA 90 bp GAAGCTGTGGATGGACTTTTGGTTGTAGGGTTTCTGAATGCTTTCGTGGAGGGACTTGTCCAGCTTTTCTaGCTCTACCTCGCCTTTCTC +
Preference number: 5 (lower is better)
Translates to: EAVDGLLVVGFLNAFVEGLVQLF*LYLAFL
Trigger: GAGAAAGGCGAGGTAGAGCAAGAAAAGCTGGACAAG...TCCCTCCACGAAAGCATTCAGAAACCCTACAACCAAAAGTCCATCCACAGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR CAA 90 bp ACTGGGGGAGCTGCACTTGGTTGCAATCCACCGCATTGTTGTTTGTATTGGCATAGCTTAGGCCAGATCTaGTCCAGCTTTTCTTGCTCT +
Preference number: 5 (lower is better)
Translates to: TGGAALGCNPPHCCLYWHSLGQI*SSFSCS
Trigger: AGAGCAAGAAAAGCTGGACAAGATCTGGCCTAAGCT...ATGCCAATACAAACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCCCCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR CAA 90 bp TTGGTTAAAGTGGATGCCACGTGCTCTCTTGTGGTCATTTTAGCAAATCATGCATTGGTGATCTCCTCTTaGGTGGTGCCATGCCCAGCC +
Preference number: 5 (lower is better)
Translates to: LVKVDATCSLVVILANHALVISS*VVPCPA
Trigger: GGCTGGGCATGGCACCACCAAAGAGGAGATCACCAA...TGCATGATTTGCTAAAATGACCACAAGAGAGCACGTGGCATCCACTTTAACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356729.5
CDS-3UTR CAA 90 bp TTGTTGTTTGTATTGGCATATGGAGTGACCTCACCATCCAACAGGAGCACCCTAGTGGTGGGGGAAGATTaGACTGGTGCAACTGCTACA +
Preference number: 5 (lower is better)
Translates to: LLFVLAYGVTSPSNRSTLVVGED*TGATAT
Trigger: TGTAGCAGTTGCACCAGTCAAATCTTCCCCCACCAC...TAGGGTGCTCCTGTTGGATGGTGAGGTCACTCCATATGCCAATACAAACAACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR CAA 90 bp AATCTCCTAGCAAAGTCCCCAACTCCTGAGAGGCAGATGGGAAGGGGATGCTTTGAACTATGGAACGCTTaGACCACTTTGATTGCCCAT +
Preference number: 5 (lower is better)
Translates to: NLLAKSPTPERQMGRGCFELWNA*TTLIAH
Trigger: ATGGGCAATCAAAGTGGTCAAAGCGTTCCATAGTTC...AAAGCATCCCCTTCCCATCTGCCTCTCAGGAGTTGGGGACTTTGCTAGGAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CAA 90 bp TGGCAACTCCTCCTCTATGGCGAATTCAGGGTGGGTCATGAAGCTGTGGATGGACAATCCACCGCATTGTaGTTTGTATTGGCATATGGA +
Preference number: 5 (lower is better)
Translates to: WQLLLYGEFRVGHEAVDGQSTAL*FVLAYG
Trigger: TCCATATGCCAATACAAACAACAATGCGGTGGATTG...TCCATCCACAGCTTCATGACCCACCCTGAATTCGCCATAGAGGAGGAGTTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR CAA 90 bp ATCCTAATGACTAGTCAGGAAAGATTCTGTCTATCCATCTGCATGGTGGGGGTTGGGAGCTGCACTTGGTaGCAATCCACCGCATTGTTG +
Preference number: 5 (lower is better)
Translates to: ILMTSQERFCLSICMVGVGSCTW*QSTALL
Trigger: CAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCC...AACCCCCACCATGCAGATGGATAGACAGAATCTTTCCTGACTAGTCATTAGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CAA 90 bp CTGGCGGATTTTATACATTCCATCTCTACCGCAACATATTTCACTTGGGGATATACTCGGGCCAGACTCTaGCTCACCAGCTCTCCCCAA +
Preference number: 5 (lower is better)
Translates to: LADFIHSISTATYFTWGYTRARL*LTSSPQ
Trigger: TTGGGGAGAGCTGGTGAGCAAGAGTCTGGCCCGAGT...ATATCCCCAAGTGAAATATGTTGCGGTAGAGATGGAATGTATAAAATCCGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367218.7
CDS CCA 90 bp CTCGATGACAGTGCGTACCATATCATCTCTGTCTTTATTCTTGAATaGCACTGCTTCCCCTTTCCGGTCCAGGATTCGATTACACTTGCG +
Preference number: 5 (lower is better)
Translates to: LDDSAYHIISVFILE*HCFPFPVQDSITLA
Trigger: CGCAAGTGTAATCGAATCCTGGACCGGAAAGGGGAAGCAGTGCCATTCAAGAATAAAGACAGAGATGATATGGTACGCACTGTCATCGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CAA 90 bp CCTTGTAAGTCTGTGCTCTTGCCTCTTCATGGTCAGGTAGAGGTTCACTTCACACTCAATCCAGCCAGCTaGTGCCTCATTTTCATCTTC +
Preference number: 5 (lower is better)
Translates to: PCKSVLLPLHGQVEVHFTLNPAS*CLIFIF
Trigger: GAAGATGAAAATGAGGCACAAGCTGGCTGGATTGAG...TGTGAAGTGAACCTCTACCTGACCATGAAGAGGCAAGAGCACAGACTTACAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CAA 90 bp AAAGTCTGCTTTGATGGTCTGTCTTGTCCTAGATTTGGCAGCGTCTGGTCCTCACTCAATCCAGCCAGCTaGTGCCTCATTTTCATCTTC +
Preference number: 5 (lower is better)
Translates to: KVCFDGLSCPRFGSVWSSLNPAS*CLIFIF
Trigger: GAAGATGAAAATGAGGCACAAGCTGGCTGGATTGAG...TGAGGACCAGACGCTGCCAAATCTAGGACAAGACAGACCATCAAAGCAGACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CAA 90 bp AAAGTCTGCTTTGATGGTCTGTCTTGTCCTAGATTTGGCAGCGTCTGGTCCTCAGATGATGGAGAACTTTaGCTCCTGTTCAATGCGGCA +
Preference number: 5 (lower is better)
Translates to: KVCFDGLSCPRFGSVWSSDDGEL*LLFNAA
Trigger: TGCCGCATTGAACAGGAGCAAAAGTTCTCCATCATC...TGAGGACCAGACGCTGCCAAATCTAGGACAAGACAGACCATCAAAGCAGACTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CAA 90 bp GAAGCTGTGGATGGACTTTTGGTTGTAGGGTTTCTGAATGCTTTCGTGGAGGGAGATGATGGAGAACTTTaGCTCCTGTTCAATGCGGCA +
Preference number: 5 (lower is better)
Translates to: EAVDGLLVVGFLNAFVEGDDGEL*LLFNAA
Trigger: TGCCGCATTGAACAGGAGCAAAAGTTCTCCATCATC...TCCCTCCACGAAAGCATTCAGAAACCCTACAACCAAAAGTCCATCCACAGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR CAA 90 bp CGCATTGTTGTTTGTATTGGCATATGGAGTGACCTCACCATCCAACAGGAGCACCTTCAGATCATTCCCTaGGATCAGGATTCCATCTGC +
Preference number: 5 (lower is better)
Translates to: RIVVCIGIWSDLTIQQEHLQIIP*DQDSIC
Trigger: GCAGATGGAATCCTGATCCAAGGGAATGATCTGAAG...GTGCTCCTGTTGGATGGTGAGGTCACTCCATATGCCAATACAAACAACAATGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR CAA 90 bp AAATGGCACAGACTTGTAGGACAAAATCCAGAATTCAGGAGAGGAACATCGGGGTTGTCCAGGGACTTCTaGACATGGTCAGATTCCCCT +
Preference number: 5 (lower is better)
Translates to: KWHRLVGQNPEFRRGTSGLSRDF*TWSDSP
Trigger: AGGGGAATCTGACCATGTCAAGAAGTCCCTGGACAA...CCCCGATGTTCCTCTCCTGAATTCTGGATTTTGTCCTACAAGTCTGTGCCATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CAA 90 bp CCTTGTAAGTCTGTGCTCTTGCCTCTTCATGGTCAGGTAGAGGTTCACTTCACACTCCGTCTTGGGTCTTaGCTTTGTTGCGATTTTCAG +
Preference number: 5 (lower is better)
Translates to: PCKSVLLPLHGQVEVHFTLRLGS*LCCDFQ
Trigger: CTGAAAATCGCAACAAAGCAAAGACCCAAGACGGAG...TGTGAAGTGAACCTCTACCTGACCATGAAGAGGCAAGAGCACAGACTTACAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CAA 90 bp ATCCAACAGGAGCACCCTAGTCCCAAACTTAGAAGCCTTGTCAGGATTTTCCTCACCTTGACTGCCTTCTaGTCCTTTTCCTCATTGTCG +
Preference number: 5 (lower is better)
Translates to: IQQEHPSPKLRSLVRIFLTLTAF*SFSSLS
Trigger: CGACAATGAGGAAAAGGACAAGAAGGCAGTCAAGGT...GAGGAAAATCCTGACAAGGCTTCTAAGTTTGGGACTAGGGTGCTCCTGTTGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR CAA 90 bp AACTTAGCTTATAAATGGCACAGACTTGTAGGACAAAATCCAGAATTCAGGAGAGCCAGGCGAGTCAGCTaGCCCTGCAGCACTGACTTC +
Preference number: 5 (lower is better)
Translates to: NLAYKWHRLVGQNPEFRRARRVS*PCSTDF
Trigger: GAAGTCAGTGCTGCAGGGCAAGCTGACTCGCCTGGC...TCTCCTGAATTCTGGATTTTGTCCTACAAGTCTGTGCCATTTATAAGCTAAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CAA 90 bp ATGCAACCTTCATGGGCAAGGCTGATCTCCCTGGCACTTAAGAACCACATACACGACAGTAATGCCAGCTaGTTTGCATTTGGCAATAGC +
Preference number: 5 (lower is better)
Translates to: MQPSWARLISLALKNHIHDSNAS*FAFGNS
Trigger: GCTATTGCCAAATGCAAACAAGCTGGCATTACTGTC...GTGTATGTGGTTCTTAAGTGCCAGGGAGATCAGCCTTGCCCATGAAGGTTGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CAA 90 bp GGCTGGAATGGCTTAACAATAGCAGGCATTTATAAGTGCCCACCCTCACCAATGAGCCGGTTGAATTCTTaGCCTTCTAAGCACAGGAAG +
Preference number: 5 (lower is better)
Translates to: GWNGLTIAGIYKCPPSPMSRLNS*PSKHRK
Trigger: CTTCCTGTGCTTAGAAGGCAAAGAATTCAACCGGCT...CATTGGTGAGGGTGGGCACTTATAAATGCCTGCTATTGTTAAGCCATTCCAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CAA 90 bp TGGGGGAGCTGCACTTGGTTGCAATCCACCGCATTGTTGTTTGTATTGGCATATTTGCGGATGAGCCGGTaGAATTCTTTGCCTTCTAAG +
Preference number: 5 (lower is better)
Translates to: WGSCTWLQSTALLFVLAYLRMSR*NSLPSK
Trigger: CTTAGAAGGCAAAGAATTCAACCGGCTCATCCGCAA...ATATGCCAATACAAACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR CAA 90 bp TACCACTCTGCCAGCTATTCTTCAAGAAACACAAATCCAACAGAGGCCCCTGATCTTGTCCAGCTTTTCTaGCTCTACCTCGCCTTTCTC +
Preference number: 5 (lower is better)
Translates to: YHSASYSSRNTNPTEAPDLVQLF*LYLAFL
Trigger: GAGAAAGGCGAGGTAGAGCAAGAAAAGCTGGACAAG...ATCAGGGGCCTCTGTTGGATTTGTGTTTCTTGAAGAATAGCTGGCAGAGTGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CAA 90 bp GGCTGGAATGGCTTAACAATAGCAGGCATTTATAAGTGCCCACCCTCACCAATGAGCTTAGGCCAGATCTaGTCCAGCTTTTCTTGCTCT +
Preference number: 5 (lower is better)
Translates to: GWNGLTIAGIYKCPPSPMSLGQI*SSFSCS
Trigger: AGAGCAAGAAAAGCTGGACAAGATCTGGCCTAAGCT...CATTGGTGAGGGTGGGCACTTATAAATGCCTGCTATTGTTAAGCCATTCCAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CAA 90 bp TTGGTTAAAGTGGATGCCACGTGCTCTCTTGTGGTCATTTTAGCAAATCATGCAAGTCCCTCGGCATCCTaGGTGATCTCCTCTTTGGTG +
Preference number: 5 (lower is better)
Translates to: LVKVDATCSLVVILANHASPSAS*VISSLV
Trigger: CACCAAAGAGGAGATCACCAAGGATGCCGAGGGACT...TGCATGATTTGCTAAAATGACCACAAGAGAGCACGTGGCATCCACTTTAACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356729.5
CDS-3UTR CAA 90 bp GACCTCACCATCCAACAGGAGCACCCTAGTCCCAAACTTAGAAGCCTTGTCAGGTTGCAATCCACCGCATaGTTGTTTGTATTGGCATAT +
Preference number: 5 (lower is better)
Translates to: DLTIQQEHPSPKLRSLVRLQSTA*LFVLAY
Trigger: ATATGCCAATACAAACAACAATGCGGTGGATTGCAA...CCTGACAAGGCTTCTAAGTTTGGGACTAGGGTGCTCCTGTTGGATGGTGAGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR CAA 90 bp TGGCAACTCCTCCTCTATGGCGAATTCAGGGTGGGTCATGAAGCTGTGGATGGATTGCAATCCACCGCATaGTTGTTTGTATTGGCATAT +
Preference number: 5 (lower is better)
Translates to: WQLLLYGEFRVGHEAVDGLQSTA*LFVLAY
Trigger: ATATGCCAATACAAACAACAATGCGGTGGATTGCAA...TCCATCCACAGCTTCATGACCCACCCTGAATTCGCCATAGAGGAGGAGTTGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR CAA 90 bp TGTCCAGAGGGATTTCTAGGTGATCTCTCTCTTAACCCCTTTAGGGACAGGAGATTCACTTGGGGATATTaGTCTCCCTCTGAACCCTCA +
Preference number: 5 (lower is better)
Translates to: CPEGFLGDLSLNPFRDRRFTWGY*SPSEPS
Trigger: TGAGGGTTCAGAGGGAGACAAATATCCCCAAGTGAA...TCTCCTGTCCCTAAAGGGGTTAAGAGAGAGATCACCTAGAAATCCCTCTGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CAA 90 bp CATACTGTGATGGTACCACGGGCTGCTTCAATTGTAAGGCAAAGGAAGCAGGAATTCACTTGGGGATATTaGTCTCCCTCTGAACCCTCA +
Preference number: 5 (lower is better)
Translates to: HTVMVPRAASIVRQRKQEFTWGY*SPSEPS
Trigger: TGAGGGTTCAGAGGGAGACAAATATCCCCAAGTGAA...TTCCTGCTTCCTTTGCCTTACAATTGAAGCAGCCCGTGGTACCATCACAGTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CAA 90 bp TTCTTTATGTTTCCTACTGTGGACAGCTCAGGTGAAAGGGGTGAGGGAGGACAGAAATCAAGGGTTCTTTaGGGCCAAAAGGGAGAAGGA +
Preference number: 5 (lower is better)
Translates to: FFMFPTVDSSGERGEGGQKSRVL*GQKGEG
Trigger: TCCTTCTCCCTTTTGGCCCAAAAGAACCCTTGATTT...CTGTCCTCCCTCACCCCTTTCACCTGAGCTGTCCACAGTAGGAAACATAAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CAA 90 bp GAGCCCACAAAAGTCTGCTTTGATGGTCTGTCTTGTCCTAGATTTGGCAGCGTCAAATCAAGGGTTCTTTaGGGCCAAAAGGGAGAAGGA +
Preference number: 5 (lower is better)
Translates to: EPTKVCFDGLSCPRFGSVKSRVL*GQKGEG
Trigger: TCCTTCTCCCTTTTGGCCCAAAAGAACCCTTGATTT...GACGCTGCCAAATCTAGGACAAGACAGACCATCAAAGCAGACTTTTGTGGGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CAA 90 bp GCTCATCTCCTTCCATCTCTCCTAATCAAGAGCAAAGGGAACAGCAGGCCTAACAAATCAAGGGTTCTTTaGGGCCAAAAGGGAGAAGGA +
Preference number: 5 (lower is better)
Translates to: AHLLPSLLIKSKGNSRPNKSRVL*GQKGEG
Trigger: TCCTTCTCCCTTTTGGCCCAAAAGAACCCTTGATTT...GTTAGGCCTGCTGTTCCCTTTGCTCTTGATTAGGAGAGATGGAAGGAGATGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CAA 90 bp CTGGCGGATTTTATACATTCCATCTCTACCGCAACATATTTCACTTGGGGATATCTGCCCTGGAGAGCCTaGGCAGATGGCTTTGAAAGC +
Preference number: 5 (lower is better)
Translates to: LADFIHSISTATYFTWGYLPWRA*ADGFES
Trigger: GCTTTCAAAGCCATCTGCCAAGGCTCTCCAGGGCAG...ATATCCCCAAGTGAAATATGTTGCGGTAGAGATGGAATGTATAAAATCCGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CAA 90 bp GAGCCTTGGCAGATGGCTTTGAAAGCAGTGGTCACCCCAAAGAGGAGCCCACAATATAAAGATGGCTGTTaGCAGAAAGAAAGTATGGTG +
Preference number: 5 (lower is better)
Translates to: EPWQMALKAVVTPKRSPQYKDGC*QKESMV
Trigger: CACCATACTTTCTTTCTGCAAACAGCCATCTTTATA...TTGTGGGCTCCTCTTTGGGGTGACCACTGCTTTCAAAGCCATCTGCCAAGGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CAA 90 bp TCTGGAACTAAATCAAGGGTTCTTTTGGGCCAAAAGGGAGAAGGATCTAAGTTTGGCCTAACAGCAGGGTaGGGAAGGCAAAAGGACTGG +
Preference number: 5 (lower is better)
Translates to: SGTKSRVLLGQKGEGSKFGLTAG*GRQKDW
Trigger: CCAGTCCTTTTGCCTTCCCAACCCTGCTGTTAGGCC...AAACTTAGATCCTTCTCCCTTTTGGCCCAAAAGAACCCTTGATTTAGTTCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS TCA 90 bp CCCTGTCTCAACTTCTTCCTACTTCTTGCTTCTCTGGGGGCCCAGTaGGGGAATAGATTGAATATATCTTGTGCAATAAGCTCCCGAGTA +
Preference number: 5 (lower is better)
Translates to: PCLNFFLLLASLGAQ*GNRLNISCAISSRV
Trigger: TACTCGGGAGCTTATTGCACAAGATATATTCAATCTATTCCCTCACTGGGCCCCCAGAGAAGCAAGAAGTAGGAAGAAGTTGAGACAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000357681.10
ENST00000367218.7
CDS GCA 90 bp GACAGTGCGTACCATATCATCTCTGTCTTTATTCTTGAATGGCACTaGTTCCCCTTTCCGGTCCAGGATTCGATTACACTTGCGCAAGAT +
Preference number: 5 (lower is better)
Translates to: DSAYHIISVFILEWH*FPFPVQDSITLAQD
Trigger: ATCTTGCGCAAGTGTAATCGAATCCTGGACCGGAAAGGGGAAGCAGTGCCATTCAAGAATAAAGACAGAGATGATATGGTACGCACTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CAA 90 bp GTATTGGTTTCTGTTCATCAGCAAAAAGCTTTATTGGCTCCAACAAATTATCCCCTCTCGGCCATCGAGTaGGCAGGCAAGACACGGTCT +
Preference number: 5 (lower is better)
Translates to: VLVSVHQQKALLAPTNYPLSAIE*AGKTRS
Trigger: AGACCGTGTCTTGCCTGCCAACTCGATGGCCGAGAG...GGGATAATTTGTTGGAGCCAATAAAGCTTTTTGCTGATGAACAGAAACCAATAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CAA 90 bp CATACTGTGATGGTACCACGGGCTGCTTCAATTGTAAGGCAAAGGAAGCAGGAAATCACCGTATTTGACTaGGGCAATATCACCAACCAC +
Preference number: 5 (lower is better)
Translates to: HTVMVPRAASIVRQRKQEITVFD*GNITNH
Trigger: GTGGTTGGTGATATTGCCCAAGTCAAATACGGTGAT...TTCCTGCTTCCTTTGCCTTACAATTGAAGCAGCCCGTGGTACCATCACAGTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CAA 90 bp GTGATCTCTCTCTTAACCCCTTTAGGGACAGGAGAGTCATTCCAGAGGACAGATAGCAGATCACCGTATTaGACTTGGGCAATATCACCA +
Preference number: 5 (lower is better)
Translates to: VISLLTPLGTGESFQRTDSRSPY*TWAISP
Trigger: TGGTGATATTGCCCAAGTCAAATACGGTGATCTGCT...ATCTGTCCTCTGGAATGACTCTCCTGTCCCTAAAGGGGTTAAGAGAGAGATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CAA 90 bp CCAAAGAGGAGCCCACAAAAGTCTGCTTTGATGGTCTGTCTTGTCCTAGATTTGTGGGTCTTTGCTTTGTaGCGATTTTCAGGGACTCCT +
Preference number: 5 (lower is better)
Translates to: PKRSPQKSALMVCLVLDLWVFAL*RFSGTP
Trigger: AGGAGTCCCTGAAAATCGCAACAAAGCAAAGACCCA...CAAATCTAGGACAAGACAGACCATCAAAGCAGACTTTTGTGGGCTCCTCTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CAA 90 bp GGCTGGAATGGCTTAACAATAGCAGGCATTTATAAGTGCCCACCCTCACCAATGTCTTGGGTCTTTGCTTaGTTGCGATTTTCAGGGACT +
Preference number: 5 (lower is better)
Translates to: GWNGLTIAGIYKCPPSPMSWVFA*LRFSGT
Trigger: AGTCCCTGAAAATCGCAACAAAGCAAAGACCCAAGA...CATTGGTGAGGGTGGGCACTTATAAATGCCTGCTATTGTTAAGCCATTCCAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CAA 90 bp GTGATCTCTCTCTTAACCCCTTTAGGGACAGGAGAGTCATTCCAGAGGACAGATTCCTTTTTAGGCACCTaGACTGCCTTCTTGTCCTTT +
Preference number: 5 (lower is better)
Translates to: VISLLTPLGTGESFQRTDSFLGT*TAFLSF
Trigger: AAAGGACAAGAAGGCAGTCAAGGTGCCTAAAAAGGA...ATCTGTCCTCTGGAATGACTCTCCTGTCCCTAAAGGGGTTAAGAGAGAGATCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CAA 90 bp GGGGAGCTGCACTTGGTTGCAATCCACCGCATTGTTGTTTGTATTGGCATATGGTTGATAGAAATGCCATaGACAATGAGGTCCAGGACT +
Preference number: 5 (lower is better)
Translates to: GELHLVAIHRIVVCIGIWLIEMP*TMRSRT
Trigger: AGTCCTGGACCTCATTGTCAATGGCATTTCTATCAA...CCATATGCCAATACAAACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR CAA 90 bp GAGCCCACAAAAGTCTGCTTTGATGGTCTGTCTTGTCCTAGATTTGGCAGCGTCTTGATAGAAATGCCATaGACAATGAGGTCCAGGACT +
Preference number: 5 (lower is better)
Translates to: EPTKVCFDGLSCPRFGSVLIEMP*TMRSRT
Trigger: AGTCCTGGACCTCATTGTCAATGGCATTTCTATCAA...GACGCTGCCAAATCTAGGACAAGACAGACCATCAAAGCAGACTTTTGTGGGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CAA 90 bp ACTGGGGGAGCTGCACTTGGTTGCAATCCACCGCATTGTTGTTTGTATTGGCATTTGATAGAAATGCCATaGACAATGAGGTCCAGGACT +
Preference number: 5 (lower is better)
Translates to: TGGAALGCNPPHCCLYWHLIEMP*TMRSRT
Trigger: AGTCCTGGACCTCATTGTCAATGGCATTTCTATCAA...ATGCCAATACAAACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCCCCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR CAA 90 bp GGAGAAAACATGAACCAAAGGCCAATTCAGTTATGGGAGCTCATCTCCTTCCATACGGTGCTCATTGACTaGCGCACTGAGTTAAAGGTG +
Preference number: 5 (lower is better)
Translates to: GENMNQRPIQLWELISFHTVLID*RTELKV
Trigger: CACCTTTAACTCAGTGCGCAAGTCAATGAGCACCGT...ATGGAAGGAGATGAGCTCCCATAACTGAATTGGCCTTTGGTTCATGTTTTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CAA 90 bp CCTTGTAAGTCTGTGCTCTTGCCTCTTCATGGTCAGGTAGAGGTTCACTTCACAAGGATTCGATTACACTaGCGCAAGATGATCTCAGAG +
Preference number: 5 (lower is better)
Translates to: PCKSVLLPLHGQVEVHFTRIRLH*RKMISE
Trigger: CTCTGAGATCATCTTGCGCAAGTGTAATCGAATCCT...TGTGAAGTGAACCTCTACCTGACCATGAAGAGGCAAGAGCACAGACTTACAAGG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CAA 90 bp CTGGCGGATTTTATACATTCCATCTCTACCGCAACATATTTCACTTGGGGATATAGTCCCTCGGCATCCTaGGTGATCTCCTCTTTGGTG +
Preference number: 5 (lower is better)
Translates to: LADFIHSISTATYFTWGYSPSAS*VISSLV
Trigger: CACCAAAGAGGAGATCACCAAGGATGCCGAGGGACT...ATATCCCCAAGTGAAATATGTTGCGGTAGAGATGGAATGTATAAAATCCGCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341360.6
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CAA 90 bp ACCCCAAAGAGGAGCCCACAAAAGTCTGCTTTGATGGTCTGTCTTGTCCTAGATTTTTACATCAAGGTGTaGACCCATGTTCTGTCGCCT +
Preference number: 5 (lower is better)
Translates to: TPKRSPQKSALMVCLVLDFYIKV*THVLSP
Trigger: AGGCGACAGAACATGGGTCAACACCTTGATGTAAAA...ATCTAGGACAAGACAGACCATCAAAGCAGACTTTTGTGGGCTCCTCTTTGGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CAA 90 bp TTGGTTAAAGTGGATGCCACGTGCTCTCTTGTGGTCATTTTAGCAAATCATGCAGTGGTGGGGGAAGATTaGACTGGTGCAACTGCTACA +
Preference number: 5 (lower is better)
Translates to: LVKVDATCSLVVILANHAVVGED*TGATAT
Trigger: TGTAGCAGTTGCACCAGTCAAATCTTCCCCCACCAC...TGCATGATTTGCTAAAATGACCACAAGAGAGCACGTGGCATCCACTTTAACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356729.5
CDS-3UTR CAA 90 bp TGGGGGAGCTGCACTTGGTTGCAATCCACCGCATTGTTGTTTGTATTGGCATATGCTGTGGATGGACTTTaGGTTGTAGGGTTTCTGAAT +
Preference number: 5 (lower is better)
Translates to: WGSCTWLQSTALLFVLAYAVDGL*VVGFLN
Trigger: ATTCAGAAACCCTACAACCAAAAGTCCATCCACAGC...ATATGCCAATACAAACAACAATGCGGTGGATTGCAACCAAGTGCAGCTCCCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341360.6
ENST00000367218.7
CDS-3UTR CAA 90 bp ATGCAACCTTCATGGGCAAGGCTGATCTCCCTGGCACTTAAGAACCACATACACGCATTGTTGTTTGTATaGGCATATGGAGTGACCTCA +
Preference number: 5 (lower is better)
Translates to: MQPSWARLISLALKNHIHALLFV*AYGVTS
Trigger: TGAGGTCACTCCATATGCCAATACAAACAACAATGC...GTGTATGTGGTTCTTAAGTGCCAGGGAGATCAGCCTTGCCCATGAAGGTTGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CAA 90 bp GAGCCCACAAAAGTCTGCTTTGATGGTCTGTCTTGTCCTAGATTTGGCAGCGTCCAATCCACCGCATTGTaGTTTGTATTGGCATATGGA +
Preference number: 5 (lower is better)
Translates to: EPTKVCFDGLSCPRFGSVQSTAL*FVLAYG
Trigger: TCCATATGCCAATACAAACAACAATGCGGTGGATTG...GACGCTGCCAAATCTAGGACAAGACAGACCATCAAAGCAGACTTTTGTGGGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357681.10
ENST00000367218.7
CDS-3UTR CAA 90 bp GCAAAAATTAGAATCAGAAACTGGAGAGAATGTCGAAGCTGGTCCCCAGGCACCCGCAACATATTTCACTaGGGGATATTTGTCTCCCTC +
Preference number: 5 (lower is better)
Translates to: AKIRIRNWRECRSWSPGTRNIFH*GIFVSL
Trigger: GAGGGAGACAAATATCCCCAAGTGAAATATGTTGCG...GGTGCCTGGGGACCAGCTTCGACATTCTCTCCAGTTTCTGATTCTAATTTTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST00000484746.1
CDS-3UTR CAA 90 bp TTCTCAGATCATGCTAGAATGGCTCTTTGGCCTCTCCCAAGGCTTCTGAACACTCGCAACATATTTCACTaGGGGATATTTGTCTCCCTC +
Preference number: 5 (lower is better)
Translates to: FSDHARMALWPLPRLLNTRNIFH*GIFVSL
Trigger: GAGGGAGACAAATATCCCCAAGTGAAATATGTTGCG...AGTGTTCAGAAGCCTTGGGAGAGGCCAAAGAGCCATTCTAGCATGATCTGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357681.10
ENST00000367218.7
ENST000004847