RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ARMCX4 (Homo sapiens)

Ensembl gene IDs: ENSG00000196440

Ensembl transcript IDs: ENST00000354842.4, ENST00000423738.4, ENST00000430461.5, ENST00000431677.1, ENST00000433011.5, ENST00000442270.5, ENST00000445416.5, ENST00000452188.5, ENST00000453574.1, ENST00000455331.5

Found 817 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACTTTCCCACTTCCCAGGACTATTAGGCAAAGCAGTACTAGGAGGTaGCCCAGTGAGTATCCCTGGGCTCTGAGCATTGCTCTCCCTGTT +
Preference number: 1 (lower is better)
Translates to: TFPLPRTIRQSSTRR*PSEYPWALSIALPV
Trigger: AACAGGGAGAGCAATGCTCAGAGCCCAGGGATACTCACTGGGGCACCTCCTAGTACTGCTTTGCCTAATAGTCCTGGGAAGTGGGAAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433011.5
3UTR TCA 90 bp GGCAAAGCAGTACTAGGAGGTGCCCCAGTGAGTATCCCTGGGCTCTaGGCATTGCTCTCCCTGTTTGTATATCAGCAACCTTATTTCCCC +
Preference number: 1 (lower is better)
Translates to: GKAVLGGAPVSIPGL*ALLSLFVYQQPYFP
Trigger: GGGGAAATAAGGTTGCTGATATACAAACAGGGAGAGCAATGCTCAGAGCCCAGGGATACTCACTGGGGCACCTCCTAGTACTGCTTTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433011.5
3UTR GCA 90 bp GTAATTGGGCTCAATCCCTCTAGCCACTATAGCAGCCCCTTTCCCTaGCTGTCAGTTCAGTGGCACGAGAGGACAAAAATGGCCAGAATG +
Preference number: 1 (lower is better)
Translates to: VIGLNPSSHYSSPFP*LSVQWHERTKMARM
Trigger: CATTCTGGCCATTTTTGTCCTCTCGTGCCACTGAACTGACAGGCAGGGAAAGGGGCTGCTATAGTGGCTAGAGGGATTGAGCCCAATTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433011.5
3UTR CCA 90 bp ATTCCATTGACCAAACCCAAGCAGAAGTCAATTACAAATGGAGTCTaGGGGATGCAGTCCCTAAGGATCAGCCGCCCAGGGCATAGAACA +
Preference number: 1 (lower is better)
Translates to: IPLTKPKQKSITNGV*GMQSLRISRPGHRT
Trigger: TGTTCTATGCCCTGGGCGGCTGATCCTTAGGGACTGCATCCCCCAGACTCCATTTGTAATTGACTTCTGCTTGGGTTTGGTCAATGGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433011.5
3UTR GCA 90 bp TCGATGCTAAAATCTCAGTTGGAAATGCAGAAATCACCCGTCTTCTaGAACGATCACACTGGAAGCTGTAGACCGGAGCTGTTCCTATTT +
Preference number: 1 (lower is better)
Translates to: SMLKSQLEMQKSPVF*NDHTGSCRPELFLF
Trigger: AAATAGGAACAGCTCCGGTCTACAGCTTCCAGTGTGATCGTTGCAGAAGACGGGTGATTTCTGCATTTCCAACTGAGATTTTAGCATCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433011.5
ENST00000442270.5
3UTR TCA 90 bp GGTACCACCTCCCAACACTGTCACATTGGGAACCCATCCTCAACATaGCTTTGGATGGGGATAAACCATATTCAAATCATAGTACATAAG +
Preference number: 1 (lower is better)
Translates to: GTTSQHCHIGNPSST*LWMGINHIQIIVHK
Trigger: CTTATGTACTATGATTTGAATATGGTTTATCCCCATCCAAAGTCATGTTGAGGATGGGTTCCCAATGTGACAGTGTTGGGAGGTGGTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
3UTR GCA 90 bp AAAGACAGGCTTATAGATTATCTGCTTTCTCTTCTTGCTTTCTCCTaGTCCCGCCAGCCTGACTCCTTTTCCTTTATTAGGACTCCAAAA +
Preference number: 1 (lower is better)
Translates to: KDRLIDYLLSLLAFS*SRQPDSFSFIRTPK
Trigger: TTTTGGAGTCCTAATAAAGGAAAAGGAGTCAGGCTGGCGGGAGCAGGAGAAAGCAAGAAGAGAAAGCAGATAATCTATAAGCCTGTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445416.5
3UTR CCA 90 bp AAAAATGGCCAGAATGTAGTCTCAGCTTTTAATATAATGGAACCATaGCTTTATTCCCTGGTGAAAGCATTCATCCCTGATATACCTAAG +
Preference number: 1 (lower is better)
Translates to: KNGQNVVSAFNIMEP*LYSLVKAFIPDIPK
Trigger: CTTAGGTATATCAGGGATGAATGCTTTCACCAGGGAATAAAGCCATGGTTCCATTATATTAAAAGCTGAGACTACATTCTGGCCATTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433011.5
3UTR-3UTR GCA 90 bp TCAAGACTGGGCAGTCACATCCGACAACTTCTTTTGAGGGCATCAAAACATGGCGGCCAGGATAGGAGGTaGGGGCAGATTCTGAGGAAA +
Preference number: 2 (lower is better)
Translates to: SRLGSHIRQLLLRASKHGGQDRR*GQILRK
Trigger: TTTCCTCAGAATCTGCCCGCACCTCCTATCCTGGCC...GCCATGTTTTGATGCCCTCAAAAGAAGTTGTCGGATGTGACTGCCCAGTCTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
3UTR-3UTR CCA 90 bp CAAAGCAGTACTAGGAGGTGCCCCAGTGAGTATCCCTGGGCTCTGAGCATTGCTGTCTTCATTGACAGCTaGGTAGCAGGTGATTCATCT +
Preference number: 2 (lower is better)
Translates to: QSSTRRCPSEYPWALSIAVFIDS*VAGDSS
Trigger: AGATGAATCACCTGCTACCCAGCTGTCAATGAAGAC...AGCAATGCTCAGAGCCCAGGGATACTCACTGGGGCACCTCCTAGTACTGCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433011.5
3UTR-3UTR CCA 90 bp CTCTTCTTCCCTCCAAAGCTGTGCCAGGGCATTCCATTGACCAAACCCAAGCAGAGTTCAAGGCCATCCTaGGCAATGTGGCAAAACCAT +
Preference number: 2 (lower is better)
Translates to: LFFPPKLCQGIPLTKPKQSSRPS*AMWQNH
Trigger: ATGGTTTTGCCACATTGCCCAGGATGGCCTTGAACT...CTGCTTGGGTTTGGTCAATGGAATGCCCTGGCACAGCTTTGGAGGGAAGAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000452188.5
3UTR CAA 90 bp CAGTGTTTGCTTTCTCGAACCACTTCTTGTACCAACTGTTGCAGGTaGGCTTCCCAGGAAGCAGGCCCAGAGATAGAGTTCAGCATGAAG +
Preference number: 2 (lower is better)
Translates to: QCLLSRTTSCTNCCR*ASQEAGPEIEFSMK
Trigger: CTTCATGCTGAACTCTATCTCTGGGCCTGCTTCCTGGGAAGCCAACCTGCAACAGTTGGTACAAGAAGTGGTTCGAGAAAGCAAACACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442270.5
ENST00000445416.5
3UTR-3UTR TCA 90 bp CAAAGCAGTACTAGGAGGTGCCCCAGTGAGTATCCCTGGGCTCTGAGCATTGCTAAGGATTCCATATATTaGAGCAAGATGGAGTGCCAG +
Preference number: 2 (lower is better)
Translates to: QSSTRRCPSEYPWALSIAKDSIY*SKMECQ
Trigger: CTGGCACTCCATCTTGCTTCAATATATGGAATCCTT...AGCAATGCTCAGAGCCCAGGGATACTCACTGGGGCACCTCCTAGTACTGCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433011.5
3UTR-3UTR CCA 90 bp CATTCCATTGACCAAACCCAAGCAGAAGTCAATTACAAATGGAGTCTGGGGGATCCAACTGTTGCAGGTTaGCTTCCCAGGAAGCAGGCC +
Preference number: 2 (lower is better)
Translates to: HSIDQTQAEVNYKWSLGDPTVAG*LPRKQA
Trigger: GGCCTGCTTCCTGGGAAGCCAACCTGCAACAGTTGG...ATCCCCCAGACTCCATTTGTAATTGACTTCTGCTTGGGTTTGGTCAATGGAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000452188.5
3UTR-3UTR CCA 90 bp ATTATGCGTGGCTTAACCCTAGTTATAGGCCCAGTGGCCAGGATAGGAGGTGCGGTCTTCATTGACAGCTaGGTAGCAGGTGATTCATCT +
Preference number: 2 (lower is better)
Translates to: IMRGLTLVIGPVARIGGAVFIDS*VAGDSS
Trigger: AGATGAATCACCTGCTACCCAGCTGTCAATGAAGAC...CGCACCTCCTATCCTGGCCACTGGGCCTATAACTAGGGTTAAGCCACGCATAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
ENST00000455331.5
3UTR-3UTR CCA 90 bp AAGATGGAGTGCCAGCCCTTAATAGGGAGGAGTAGGACACTTCTCAAGGGGCTCGTCTTCATTGACAGCTaGGTAGCAGGTGATTCATCT +
Preference number: 2 (lower is better)
Translates to: KMECQPLIGRSRTLLKGLVFIDS*VAGDSS
Trigger: AGATGAATCACCTGCTACCCAGCTGTCAATGAAGAC...GAGCCCCTTGAGAAGTGTCCTACTCCTCCCTATTAAGGGCTGGCACTCCATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
ENST00000455331.5
3UTR-3UTR CCA 90 bp CTCTTCTTCCCTCCAAAGCTGTGCCAGGGCATTCCATTGACCAAACCCAAGCAGGGGCTCAGGGGAATCTaGGGATATAAGATTTTTAGG +
Preference number: 2 (lower is better)
Translates to: LFFPPKLCQGIPLTKPKQGLRGI*GYKIFR
Trigger: CCTAAAAATCTTATATCCCCAGATTCCCCTGAGCCC...CTGCTTGGGTTTGGTCAATGGAATGCCCTGGCACAGCTTTGGAGGGAAGAAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000452188.5
3UTR-3UTR CCA 90 bp CCCAGGACTATTAGGCAAAGCAGTACTAGGAGGTGCCCCAGTGAGTATCCCTGGCAACAAGCAATTTTGTaGCACCCAGAGGTTAGCAAT +
Preference number: 2 (lower is better)
Translates to: PRTIRQSSTRRCPSEYPWQQAIL*HPEVSN
Trigger: ATTGCTAACCTCTGGGTGCCACAAAATTGCTTGTTG...CCAGGGATACTCACTGGGGCACCTCCTAGTACTGCTTTGCCTAATAGTCCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433011.5
3UTR-3UTR CCA 90 bp ATTAAGGCATTCTGGAAGTCCATGGAGATGGTGATGACAGAATCATTGTCAGCACCAACTGTTGCAGGTTaGCTTCCCAGGAAGCAGGCC +
Preference number: 2 (lower is better)
Translates to: IKAFWKSMEMVMTESLSAPTVAG*LPRKQA
Trigger: GGCCTGCTTCCTGGGAAGCCAACCTGCAACAGTTGG...TGCTGACAATGATTCTGTCATCACCATCTCCATGGACTTCCAGAATGCCTTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000452188.5
3UTR-3UTR CCA 90 bp CAGGTTATCTTACAGGGGAAAGGATTCCATATATTGAAGCAAGATGGAGTGCCACCAACTGTTGCAGGTTaGCTTCCCAGGAAGCAGGCC +
Preference number: 2 (lower is better)
Translates to: QVILQGKGFHILKQDGVPPTVAG*LPRKQA
Trigger: GGCCTGCTTCCTGGGAAGCCAACCTGCAACAGTTGG...TGGCACTCCATCTTGCTTCAATATATGGAATCCTTTCCCCTGTAAGATAACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
ENST00000455331.5
3UTR-3UTR CCA 90 bp GCTGTTACCCTAGGCCTAAGAGGGCAAGAGGAAGAAATAGTATTTCTGGAGCCTCTAACACCATGGGACTaGCTGATGCCCCTAAGGAAT +
Preference number: 2 (lower is better)
Translates to: AVTLGLRGQEEEIVFLEPLTPWD*LMPLRN
Trigger: ATTCCTTAGGGGCATCAGCCAGTCCCATGGTGTTAG...AGGCTCCAGAAATACTATTTCTTCCTCTTGCCCTCTTAGGCCTAGGGTAACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000452188.5
3UTR-3UTR TCA 90 bp AGTGGCCAGGATAGGAGGTGCGGGCAGATTCTGAGGAAAACCCAGGTTATCTTAAAGGATTCCATATATTaGAGCAAGATGGAGTGCCAG +
Preference number: 2 (lower is better)
Translates to: SGQDRRCGQILRKTQVILKDSIY*SKMECQ
Trigger: CTGGCACTCCATCTTGCTTCAATATATGGAATCCTT...TAAGATAACCTGGGTTTTCCTCAGAATCTGCCCGCACCTCCTATCCTGGCCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
ENST00000455331.5
3UTR-3UTR GCA 90 bp CCTAGTTATAGGCCCAGTGGCCAGGATAGGAGGTGCGGGCAGATTCTGAGGAAATTTCATCACAGTGTTTaGTTTCTCGAACCACTTCTT +
Preference number: 2 (lower is better)
Translates to: PSYRPSGQDRRCGQILRKFHHSV*FLEPLL
Trigger: AAGAAGTGGTTCGAGAAAGCAAACACTGTGATGAAA...TTTCCTCAGAATCTGCCCGCACCTCCTATCCTGGCCACTGGGCCTATAACTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
ENST00000455331.5
3UTR-3UTR CCA 90 bp AAATTCGAAGAGTTCAAATCAGGATTAATCCTCTCCCTCTCCCAAATCTTCTCCCCAACTGTTGCAGGTTaGCTTCCCAGGAAGCAGGCC +
Preference number: 2 (lower is better)
Translates to: KFEEFKSGLILSLSQIFSPTVAG*LPRKQA
Trigger: GGCCTGCTTCCTGGGAAGCCAACCTGCAACAGTTGG...GGAGAAGATTTGGGAGAGGGAGAGGATTAATCCTGATTTGAACTCTTCGAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
3UTR-3UTR CCA 90 bp CACAAATGCCTCTTAAGGGTACCACCTCCCAACACTGTCACATTGGGAACCCATGGGCTCAGGGGAATCTaGGGATATAAGATTTTTAGG +
Preference number: 2 (lower is better)
Translates to: HKCLLRVPPPNTVTLGTHGLRGI*GYKIFR
Trigger: CCTAAAAATCTTATATCCCCAGATTCCCCTGAGCCC...ATGGGTTCCCAATGTGACAGTGTTGGGAGGTGGTACCCTTAAGAGGCATTTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
3UTR-3UTR CCA 90 bp TCAAGACTGGGCAGTCACATCCGACAACTTCTTTTGAGGGCATCAAAACATGGCTCCCGCCATCTTCTATaGCAACTCTGGCATTTACAC +
Preference number: 2 (lower is better)
Translates to: SRLGSHIRQLLLRASKHGSRHLL*QLWHLH
Trigger: GTGTAAATGCCAGAGTTGCCATAGAAGATGGCGGGA...GCCATGTTTTGATGCCCTCAAAAGAAGTTGTCGGATGTGACTGCCCAGTCTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
3UTR-3UTR CCA 90 bp AAAGGGGAAACAGGTACACGCAAAAGACACCAAGCACAAGAGGCAGACTCACTTTCCCGCCATCTTCTATaGCAACTCTGGCATTTACAC +
Preference number: 2 (lower is better)
Translates to: KGETGTRKRHQAQEADSLSRHLL*QLWHLH
Trigger: GTGTAAATGCCAGAGTTGCCATAGAAGATGGCGGGA...AAGTGAGTCTGCCTCTTGTGCTTGGTGTCTTTTGCGTGTACCTGTTTCCCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
3UTR-3UTR GCA 90 bp CCCAGGACTATTAGGCAAAGCAGTACTAGGAGGTGCCCCAGTGAGTATCCCTGGAAGATCTCAGAAGTGTaGTTTGCATATACACTTTCT +
Preference number: 2 (lower is better)
Translates to: PRTIRQSSTRRCPSEYPWKISEV*FAYTLS
Trigger: AGAAAGTGTATATGCAAAGCACACTTCTGAGATCTT...CCAGGGATACTCACTGGGGCACCTCCTAGTACTGCTTTGCCTAATAGTCCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433011.5
3UTR-3UTR GCA 90 bp CCCTTTCCCTGCCTGTCAGTTCAGTGGCACGAGAGGACAAAAATGGCCAGAATGACTTACAGAGGTATATaGAAGATTATGAGACCCAAC +
Preference number: 2 (lower is better)
Translates to: PFPCLSVQWHERTKMARMTYRGI*KIMRPN
Trigger: GTTGGGTCTCATAATCTTGCATATACCTCTGTAAGT...CATTCTGGCCATTTTTGTCCTCTCGTGCCACTGAACTGACAGGCAGGGAAAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433011.5
3UTR-3UTR CCA 90 bp CCATGGCACATAACTCGGCATAGAAGACTTGTCTTGGTTAGAATTTTAACTTTCCCAACTGTTGCAGGTTaGCTTCCCAGGAAGCAGGCC +
Preference number: 2 (lower is better)
Translates to: PWHITRHRRLVLVRILTFPTVAG*LPRKQA
Trigger: GGCCTGCTTCCTGGGAAGCCAACCTGCAACAGTTGG...GAAAGTTAAAATTCTAACCAAGACAAGTCTTCTATGCCGAGTTATGTGCCATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
ENST00000455331.5
3UTR-3UTR CCA 90 bp TGTTCTGTTAGTTTTGAGGGCTGGGAAGTTCAAGACTGGGCAGTCACATCCGACCCTTCTAGTATATGCTaGCTAGGTTATGTCCCGAAA +
Preference number: 2 (lower is better)
Translates to: CSVSFEGWEVQDWAVTSDPSSIC*LGYVPK
Trigger: TTTCGGGACATAACCTAGCCAGCATATACTAGAAGG...GTCGGATGTGACTGCCCAGTCTTGAACTTCCCAGCCCTCAAAACTAACAGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433011.5
ENST00000445416.5
3UTR-3UTR CCA 90 bp CAGGAAGCTACTGGAAGATATGTTAGTTTTGAGGGCTGGGAAGTTCAAGACTGGTCCCGCCATCTTCTATaGCAACTCTGGCATTTACAC +
Preference number: 2 (lower is better)
Translates to: QEATGRYVSFEGWEVQDWSRHLL*QLWHLH
Trigger: GTGTAAATGCCAGAGTTGCCATAGAAGATGGCGGGA...CCAGTCTTGAACTTCCCAGCCCTCAAAACTAACATATCTTCCAGTAGCTTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354842.4
ENST00000442270.5
ENST00000452188.5
3UTR-3UTR CCA 90 bp GCTGTTACCCTAGGCCTAAGAGGGCAAGAGGAAGAAATAGTATTTCTGGAGCCTGAAGTCAATTACAAATaGAGTCTGGGGGATGCAGTC +
Preference number: 2 (lower is better)
Translates to: AVTLGLRGQEEEIVFLEPEVNYK*SLGDAV
Trigger: GACTGCATCCCCCAGACTCCATTTGTAATTGACTTC...AGGCTCCAGAAATACTATTTCTTCCTCTTGCCCTCTTAGGCCTAGGGTAACAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000452188.5
3UTR-3UTR TCA 90 bp CTAAAATCTCAGTTGGAAATGCAGAAATCACCCGTCTTCTGCAACGATCACACTGTCTCTCTGAGTCTTTaGTCCCTTTTCCCGCCATCT +
Preference number: 2 (lower is better)
Translates to: LKSQLEMQKSPVFCNDHTVSLSL*SLFPPS
Trigger: AGATGGCGGGAAAAGGGATCAAAGACTCAGAGAGAC...AGTGTGATCGTTGCAGAAGACGGGTGATTTCTGCATTTCCAACTGAGATTTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433011.5
ENST00000442270.5
3UTR-3UTR TCA 90 bp TACCACCTCCCAACACTGTCACATTGGGAACCCATCCTCAACATGACTTTGGATTCCTTTATGTCTCTCTaGGTCTTTGATCCCTTTTCC +
Preference number: 2 (lower is better)
Translates to: YHLPTLSHWEPILNMTLDSFMSL*VFDPFS
Trigger: GGAAAAGGGATCAAAGACTCAGAGAGACATAAAGGA...ATCCAAAGTCATGTTGAGGATGGGTTCCCAATGTGACAGTGTTGGGAGGTGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
3UTR-3UTR TCA 90 bp ATGCAGTCCCTGCCAATAAAACATAGCCCAAATCAGAGTGGGAGCAGTGAAGAATGCAGTCCCATTAAATaGGTTCCTTGGTCAGAGACA +
Preference number: 2 (lower is better)
Translates to: MQSLPIKHSPNQSGSSEECSPIK*VPWSET
Trigger: TGTCTCTGACCAAGGAACTCATTTAATGGGACTGCA...TTCTTCACTGCTCCCACTCTGATTTGGGCTATGTTTTATTGGCAGGGACTGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354842.4
ENST00000442270.5
ENST00000452188.5
3UTR-3UTR GCA 90 bp CTCTTCTTCCCTCCAAAGCTGTGCCAGGGCATTCCATTGACCAAACCCAAGCAGAAGATCTCAGAAGTGTaGTTTGCATATACACTTTCT +
Preference number: 2 (lower is better)
Translates to: LFFPPKLCQGIPLTKPKQKISEV*FAYTLS
Trigger: AGAAAGTGTATATGCAAAGCACACTTCTGAGATCTT...CTGCTTGGGTTTGGTCAATGGAATGCCCTGGCACAGCTTTGGAGGGAAGAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000452188.5
3UTR-3UTR CCA 90 bp CAGGAAGCTACTGGAAGATATGTTAGTTTTGAGGGCTGGGAAGTTCAAGACTGGGTCTTCATTGACAGCTaGGTAGCAGGTGATTCATCT +
Preference number: 2 (lower is better)
Translates to: QEATGRYVSFEGWEVQDWVFIDS*VAGDSS
Trigger: AGATGAATCACCTGCTACCCAGCTGTCAATGAAGAC...CCAGTCTTGAACTTCCCAGCCCTCAAAACTAACATATCTTCCAGTAGCTTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354842.4
ENST00000442270.5
ENST00000452188.5
3UTR-3UTR CCA 90 bp TTGATCCCTTTTCCCGCCATCTTCTATGGCAACTCTGGCATTTACACCTCACTTGGGCTCAGGGGAATCTaGGGATATAAGATTTTTAGG +
Preference number: 2 (lower is better)
Translates to: LIPFPAIFYGNSGIYTSLGLRGI*GYKIFR
Trigger: CCTAAAAATCTTATATCCCCAGATTCCCCTGAGCCC...AAGTGAGGTGTAAATGCCAGAGTTGCCATAGAAGATGGCGGGAAAAGGGATCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
3UTR-3UTR CCA 90 bp TCAAGACTGGGCAGTCACATCCGACAACTTCTTTTGAGGGCATCAAAACATGGCCCTTCTAGTATATGCTaGCTAGGTTATGTCCCGAAA +
Preference number: 2 (lower is better)
Translates to: SRLGSHIRQLLLRASKHGPSSIC*LGYVPK
Trigger: TTTCGGGACATAACCTAGCCAGCATATACTAGAAGG...GCCATGTTTTGATGCCCTCAAAAGAAGTTGTCGGATGTGACTGCCCAGTCTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
3UTR CAA 90 bp TATACACTTTCTCAGGAAGCTACTGGAAGATATGTTCTGTTAGTTTaGAGGGCTGGGAAGTTCAAGACTGGGCAGTCACATCCGACAACT +
Preference number: 2 (lower is better)
Translates to: YTLSQEATGRYVLLV*RAGKFKTGQSHPTT
Trigger: AGTTGTCGGATGTGACTGCCCAGTCTTGAACTTCCCAGCCCTCAAAACTAACAGAACATATCTTCCAGTAGCTTCCTGAGAAAGTGTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433011.5
ENST00000445416.5
3UTR-3UTR TCA 90 bp TGGAAGATATGTTCTGTTAGTTTTGAGGGCTGGGAAGTTCAAGACTGGGCAGTCAAGGATTCCATATATTaGAGCAAGATGGAGTGCCAG +
Preference number: 2 (lower is better)
Translates to: WKICSVSFEGWEVQDWAVKDSIY*SKMECQ
Trigger: CTGGCACTCCATCTTGCTTCAATATATGGAATCCTT...GACTGCCCAGTCTTGAACTTCCCAGCCCTCAAAACTAACAGAACATATCTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433011.5
ENST00000445416.5
3UTR-3UTR TCA 90 bp ATGATGATTAAGGCATTCTGGAAGTCCATGGAGATGGTGATGACAGAATCATTGGTCTCTCTGAGTCTTTaGTCCCTTTTCCCGCCATCT +
Preference number: 2 (lower is better)
Translates to: MMIKAFWKSMEMVMTESLVSLSL*SLFPPS
Trigger: AGATGGCGGGAAAAGGGATCAAAGACTCAGAGAGAC...CAATGATTCTGTCATCACCATCTCCATGGACTTCCAGAATGCCTTAATCATCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000452188.5
3UTR-3UTR TCA 90 bp AGCTACTGGAAGATATGTTCTGTTAGTTTTGAGGGCTGGGAAGTTCAAGACTGGAACCCATCCTCAACATaGCTTTGGATGGGGATAAAC +
Preference number: 2 (lower is better)
Translates to: SYWKICSVSFEGWEVQDWNPSST*LWMGIN
Trigger: GTTTATCCCCATCCAAAGTCATGTTGAGGATGGGTT...CCAGTCTTGAACTTCCCAGCCCTCAAAACTAACAGAACATATCTTCCAGTAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433011.5
ENST00000445416.5
3UTR-3UTR GCA 90 bp CACAAATGCCTCTTAAGGGTACCACCTCCCAACACTGTCACATTGGGAACCCATTTTCATCACAGTGTTTaGTTTCTCGAACCACTTCTT +
Preference number: 2 (lower is better)
Translates to: HKCLLRVPPPNTVTLGTHFHHSV*FLEPLL
Trigger: AAGAAGTGGTTCGAGAAAGCAAACACTGTGATGAAA...ATGGGTTCCCAATGTGACAGTGTTGGGAGGTGGTACCCTTAAGAGGCATTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
3UTR-3UTR CCA 90 bp CACAAATGCCTCTTAAGGGTACCACCTCCCAACACTGTCACATTGGGAACCCATAGCCGCCCAATTTTCTaGCCTTCCTTATATTTAATA +
Preference number: 2 (lower is better)
Translates to: HKCLLRVPPPNTVTLGTHSRPIF*PSLYLI
Trigger: TATTAAATATAAGGAAGGCCAGAAAATTGGGCGGCT...ATGGGTTCCCAATGTGACAGTGTTGGGAGGTGGTACCCTTAAGAGGCATTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
3UTR-3UTR CCA 90 bp AGCTACTGGAAGATATGTTCTGTTAGTTTTGAGGGCTGGGAAGTTCAAGACTGGGGGCTCAGGGGAATCTaGGGATATAAGATTTTTAGG +
Preference number: 2 (lower is better)
Translates to: SYWKICSVSFEGWEVQDWGLRGI*GYKIFR
Trigger: CCTAAAAATCTTATATCCCCAGATTCCCCTGAGCCC...CCAGTCTTGAACTTCCCAGCCCTCAAAACTAACAGAACATATCTTCCAGTAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000433011.5
ENST00000445416.5
3UTR-3UTR TCA 90 bp TCAAGACTGGGCAGTCACATCCGACAACTTCTTTTGAGGGCATCAAAACATGGCTATTTCTCAAAGGTCTaGTACATGGCACCAGTTAAT +
Preference number: 2 (lower is better)
Translates to: SRLGSHIRQLLLRASKHGYFSKV*YMAPVN
Trigger: ATTAACTGGTGCCATGTATCAGACCTTTGAGAAATA...GCCATGTTTTGATGCCCTCAAAAGAAGTTGTCGGATGTGACTGCCCAGTCTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
3UTR-3UTR TCA 90 bp TACCACCTCCCAACACTGTCACATTGGGAACCCATCCTCAACATGACTTTGGATTATTTCTCAAAGGTCTaGTACATGGCACCAGTTAAT +
Preference number: 2 (lower is better)
Translates to: YHLPTLSHWEPILNMTLDYFSKV*YMAPVN
Trigger: ATTAACTGGTGCCATGTATCAGACCTTTGAGAAATA...ATCCAAAGTCATGTTGAGGATGGGTTCCCAATGTGACAGTGTTGGGAGGTGGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
3UTR-3UTR CCA 90 bp CATTCCATTGACCAAACCCAAGCAGAAGTCAATTACAAATGGAGTCTGGGGGATCCTTCTAGTATATGCTaGCTAGGTTATGTCCCGAAA +
Preference number: 2 (lower is better)
Translates to: HSIDQTQAEVNYKWSLGDPSSIC*LGYVPK
Trigger: TTTCGGGACATAACCTAGCCAGCATATACTAGAAGG...ATCCCCCAGACTCCATTTGTAATTGACTTCTGCTTGGGTTTGGTCAATGGAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000452188.5
3UTR-3UTR CCA 90 bp ATGATGATTAAGGCATTCTGGAAGTCCATGGAGATGGTGATGACAGAATCATTGAGTTCAAGGCCATCCTaGGCAATGTGGCAAAACCAT +
Preference number: 2 (lower is better)
Translates to: MMIKAFWKSMEMVMTESLSSRPS*AMWQNH
Trigger: ATGGTTTTGCCACATTGCCCAGGATGGCCTTGAACT...CAATGATTCTGTCATCACCATCTCCATGGACTTCCAGAATGCCTTAATCATCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000452188.5
3UTR-3UTR TCA 90 bp CAGGGGAAAGGATTCCATATATTGAAGCAAGATGGAGTGCCAGCCCTTAATAGGTATTTCTCAAAGGTCTaGTACATGGCACCAGTTAAT +
Preference number: 2 (lower is better)
Translates to: QGKGFHILKQDGVPALNRYFSKV*YMAPVN
Trigger: ATTAACTGGTGCCATGTATCAGACCTTTGAGAAATA...CCTATTAAGGGCTGGCACTCCATCTTGCTTCAATATATGGAATCCTTTCCCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
3UTR-3UTR TCA 90 bp GTTATCTTACAGGGGAAAGGATTCCATATATTGAAGCAAGATGGAGTGCCAGCCGCTTTTAACAAATCCTaGGTCTACTCCTCAGATTTC +
Preference number: 2 (lower is better)
Translates to: VILQGKGFHILKQDGVPAAFNKS*VYSSDF
Trigger: GAAATCTGAGGAGTAGACTCAGGATTTGTTAAAAGC...GGCTGGCACTCCATCTTGCTTCAATATATGGAATCCTTTCCCCTGTAAGATAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
ENST00000455331.5
3UTR-3UTR TCA 90 bp GAGTTCGTGTCATTTCCTGTGGTTTTCTCCAGGGTATTAAATCCTGTATTCTGGATATTCCAGCCCTCCTaGTCAAGCTCCTTAGAATTT +
Preference number: 2 (lower is better)
Translates to: EFVSFPVVFSRVLNPVFWIFQPS*SSSLEF
Trigger: AAATTCTAAGGAGCTTGATCAGGAGGGCTGGAATAT...CCAGAATACAGGATTTAATACCCTGGAGAAAACCACAGGAAATGACACGAACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
3UTR-3UTR TCA 90 bp AAACATAGCCCAAATCAGAGTGGGAGCAGTGAAGAAATACATTGTCTTCTCTCTAACCCATCCTCAACATaGCTTTGGATGGGGATAAAC +
Preference number: 2 (lower is better)
Translates to: KHSPNQSGSSEEIHCLLSNPSST*LWMGIN
Trigger: GTTTATCCCCATCCAAAGTCATGTTGAGGATGGGTT...AGAGAGAAGACAATGTATTTCTTCACTGCTCCCACTCTGATTTGGGCTATGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000452188.5
3UTR-3UTR GCA 90 bp TTGATCCCTTTTCCCGCCATCTTCTATGGCAACTCTGGCATTTACACCTCACTTTTTCATCACAGTGTTTaGTTTCTCGAACCACTTCTT +
Preference number: 2 (lower is better)
Translates to: LIPFPAIFYGNSGIYTSLFHHSV*FLEPLL
Trigger: AAGAAGTGGTTCGAGAAAGCAAACACTGTGATGAAA...AAGTGAGGTGTAAATGCCAGAGTTGCCATAGAAGATGGCGGGAAAAGGGATCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
3UTR-3UTR CCA 90 bp AAACATAGCCCAAATCAGAGTGGGAGCAGTGAAGAAATACATTGTCTTCTCTCTGTCTTCATTGACAGCTaGGTAGCAGGTGATTCATCT +
Preference number: 2 (lower is better)
Translates to: KHSPNQSGSSEEIHCLLSVFIDS*VAGDSS
Trigger: AGATGAATCACCTGCTACCCAGCTGTCAATGAAGAC...AGAGAGAAGACAATGTATTTCTTCACTGCTCCCACTCTGATTTGGGCTATGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000452188.5
3UTR CAA 90 bp CTGGGCAATGTGGCAAAACCATCTGAAAGATCTCAGAAGTGTGCTTaGCATATACACTTTCTCAGGAAGCTACTGGAAGATATGTTAGTT +
Preference number: 2 (lower is better)
Translates to: LGNVAKPSERSQKCA*HIHFLRKLLEDMLV
Trigger: AACTAACATATCTTCCAGTAGCTTCCTGAGAAAGTGTATATGCAAAGCACACTTCTGAGATCTTTCAGATGGTTTTGCCACATTGCCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354842.4
ENST00000442270.5
ENST00000452188.5
3UTR-3UTR TCA 90 bp ATCTTACAGGGGAAAGGATTCCATATATTGAAGCAAGATGGAGTGCCAGCCCTTTATTTCTCAAAGGTCTaGTACATGGCACCAGTTAAT +
Preference number: 2 (lower is better)
Translates to: ILQGKGFHILKQDGVPALYFSKV*YMAPVN
Trigger: ATTAACTGGTGCCATGTATCAGACCTTTGAGAAATA...AAGGGCTGGCACTCCATCTTGCTTCAATATATGGAATCCTTTCCCCTGTAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
3UTR-3UTR TCA 90 bp AAATTCGAAGAGTTCAAATCAGGATTAATCCTCTCCCTCTCCCAAATCTTCTCCAAGGATTCCATATATTaGAGCAAGATGGAGTGCCAG +
Preference number: 2 (lower is better)
Translates to: KFEEFKSGLILSLSQIFSKDSIY*SKMECQ
Trigger: CTGGCACTCCATCTTGCTTCAATATATGGAATCCTT...GGAGAAGATTTGGGAGAGGGAGAGGATTAATCCTGATTTGAACTCTTCGAATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
3UTR-3UTR TCA 90 bp AAATTCGAAGAGTTCAAATCAGGATTAATCCTCTCCCTCTCCCAAATCTTCTCCATATTCCAGCCCTCCTaGTCAAGCTCCTTAGAATTT +
Preference number: 2 (lower is better)
Translates to: KFEEFKSGLILSLSQIFSIFQPS*SSSLEF
Trigger: AAATTCTAAGGAGCTTGATCAGGAGGGCTGGAATAT...GGAGAAGATTTGGGAGAGGGAGAGGATTAATCCTGATTTGAACTCTTCGAATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
3UTR-3UTR GCA 90 bp ATCTTACAGGGGAAAGGATTCCATATATTGAAGCAAGATGGAGTGCCAGCCCTTTTTCATCACAGTGTTTaGTTTCTCGAACCACTTCTT +
Preference number: 2 (lower is better)
Translates to: ILQGKGFHILKQDGVPALFHHSV*FLEPLL
Trigger: AAGAAGTGGTTCGAGAAAGCAAACACTGTGATGAAA...AAGGGCTGGCACTCCATCTTGCTTCAATATATGGAATCCTTTCCCCTGTAAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
ENST00000455331.5
3UTR-3UTR CCA 90 bp CCATGGCACATAACTCGGCATAGAAGACTTGTCTTGGTTAGAATTTTAACTTTCGTCTTCATTGACAGCTaGGTAGCAGGTGATTCATCT +
Preference number: 2 (lower is better)
Translates to: PWHITRHRRLVLVRILTFVFIDS*VAGDSS
Trigger: AGATGAATCACCTGCTACCCAGCTGTCAATGAAGAC...GAAAGTTAAAATTCTAACCAAGACAAGTCTTCTATGCCGAGTTATGTGCCATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
ENST00000455331.5
3UTR-3UTR CCA 90 bp CCAGGTTATCTTACAGGGGAAAGGATTCCATATATTGAAGCAAGATGGAGTGCCAGCCGCCCAATTTTCTaGCCTTCCTTATATTTAATA +
Preference number: 2 (lower is better)
Translates to: PGYLTGERIPYIEARWSASRPIF*PSLYLI
Trigger: TATTAAATATAAGGAAGGCCAGAAAATTGGGCGGCT...GGCACTCCATCTTGCTTCAATATATGGAATCCTTTCCCCTGTAAGATAACCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
3UTR-3UTR CCA 90 bp AAATTCGAAGAGTTCAAATCAGGATTAATCCTCTCCCTCTCCCAAATCTTCTCCCCTTCTAGTATATGCTaGCTAGGTTATGTCCCGAAA +
Preference number: 2 (lower is better)
Translates to: KFEEFKSGLILSLSQIFSPSSIC*LGYVPK
Trigger: TTTCGGGACATAACCTAGCCAGCATATACTAGAAGG...GGAGAAGATTTGGGAGAGGGAGAGGATTAATCCTGATTTGAACTCTTCGAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
3UTR-3UTR TCA 90 bp ACAGCTGATCCCATAACTAAGCTTCCAGTAAGTTATTTATTTTTGTGTAAGGCATGTGGCAAAACCATCTaGAAGATCTCAGAAGTGTGC +
Preference number: 2 (lower is better)
Translates to: TADPITKLPVSYLFLCKACGKTI*KISEVC
Trigger: GCACACTTCTGAGATCTTTCAGATGGTTTTGCCACA...TGCCTTACACAAAAATAAATAACTTACTGGAAGCTTAGTTATGGGATCAGCTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433011.5
3UTR-3UTR CCA 90 bp GAAGTCCATGGAGATGGTGATGACAGAATCATTGTCAGCAAAGAAGGTAAATGTAGCCGCCCAATTTTCTaGCCTTCCTTATATTTAATA +
Preference number: 2 (lower is better)
Translates to: EVHGDGDDRIIVSKEGKCSRPIF*PSLYLI
Trigger: TATTAAATATAAGGAAGGCCAGAAAATTGGGCGGCT...ACATTTACCTTCTTTGCTGACAATGATTCTGTCATCACCATCTCCATGGACTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000452188.5
3UTR-3UTR CCA 90 bp TCCTGGACCATGAAGAAAGACAGGCTTATAGATTATCTGCTTTCTCTTCTTGCTTTCTCAGGAAGCTACTaGAAGATATGTTCTGTTAGT +
Preference number: 2 (lower is better)
Translates to: SWTMKKDRLIDYLLSLLAFSGSY*KICSVS
Trigger: ACTAACAGAACATATCTTCCAGTAGCTTCCTGAGAA...AGCAAGAAGAGAAAGCAGATAATCTATAAGCCTGTCTTTCTTCATGGTCCAGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445416.5
3UTR-3UTR GCA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGATGCAATTTACAATGTaGATTACTTCCAGAGTGCAA +
Preference number: 2 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKMQFTM*ITSRVQ
Trigger: TTGCACTCTGGAAGTAATGCACATTGTAAATTGCAT...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423738.4
3UTR-3UTR CAA 90 bp AAGATGGAGTGCCAGCCCTTAATAGGGAGGAGTAGGACACTTCTCAAGGGGCTCACCAACTGTTGCAGGTaGGCTTCCCAGGAAGCAGGC +
Preference number: 3 (lower is better)
Translates to: KMECQPLIGRSRTLLKGLTNCCR*ASQEAG
Trigger: GCCTGCTTCCTGGGAAGCCAACCTGCAACAGTTGGT...GAGCCCCTTGAGAAGTGTCCTACTCCTCCCTATTAAGGGCTGGCACTCCATCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
ENST00000455331.5
3UTR-3UTR CAA 90 bp CACCTCCCAACACTGTCACATTGGGAACCCATCCTCAACATGACTTTGGATGGGACCAACTGTTGCAGGTaGGCTTCCCAGGAAGCAGGC +
Preference number: 3 (lower is better)
Translates to: HLPTLSHWEPILNMTLDGTNCCR*ASQEAG
Trigger: GCCTGCTTCCTGGGAAGCCAACCTGCAACAGTTGGT...CCCATCCAAAGTCATGTTGAGGATGGGTTCCCAATGTGACAGTGTTGGGAGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
3UTR GCA 72 bp CTTCCCAGGACTATTAGGCAAAGCAGTACTAGGAGGTaGCCCAGTGAGTATCCCTGGGCTCTGAGCATTGCT +
Preference number: 3 (lower is better)
Translates to: LPRTIRQSSTRR*PSEYPWALSIA
Trigger: AGCAATGCTCAGAGCCCAGGGATACTCACTGGGGCACCTCCTAGTACTGCTTTGCCTAATAGTCCTGGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433011.5
3UTR TCA 72 bp GTACTAGGAGGTGCCCCAGTGAGTATCCCTGGGCTCTaGGCATTGCTCTCCCTGTTTGTATATCAGCAACCT +
Preference number: 3 (lower is better)
Translates to: VLGGAPVSIPGL*ALLSLFVYQQP
Trigger: AGGTTGCTGATATACAAACAGGGAGAGCAATGCTCAGAGCCCAGGGATACTCACTGGGGCACCTCCTAGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433011.5
3UTR GCA 72 bp CTCAATCCCTCTAGCCACTATAGCAGCCCCTTTCCCTaGCTGTCAGTTCAGTGGCACGAGAGGACAAAAATG +
Preference number: 3 (lower is better)
Translates to: LNPSSHYSSPFP*LSVQWHERTKM
Trigger: CATTTTTGTCCTCTCGTGCCACTGAACTGACAGGCAGGGAAAGGGGCTGCTATAGTGGCTAGAGGGATTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433011.5
3UTR-3UTR CAA 90 bp TTGATCCCTTTTCCCGCCATCTTCTATGGCAACTCTGGCATTTACACCTCACTTACCAACTGTTGCAGGTaGGCTTCCCAGGAAGCAGGC +
Preference number: 3 (lower is better)
Translates to: LIPFPAIFYGNSGIYTSLTNCCR*ASQEAG
Trigger: GCCTGCTTCCTGGGAAGCCAACCTGCAACAGTTGGT...AAGTGAGGTGTAAATGCCAGAGTTGCCATAGAAGATGGCGGGAAAAGGGATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
3UTR GCA 72 bp AACCCTAGTTATAGGCCCAGTGGCCAGGATAGGAGGTaGGGGCAGATTCTGAGGAAAACCCAGGTTATCTTA +
Preference number: 3 (lower is better)
Translates to: NPSYRPSGQDRR*GQILRKTQVIL
Trigger: TAAGATAACCTGGGTTTTCCTCAGAATCTGCCCGCACCTCCTATCCTGGCCACTGGGCCTATAACTAGGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
ENST00000455331.5
3UTR CCA 72 bp CAAAGCAGTACTAGGAGGTGCCCCAGTGAGTATCCCTaGGCTCTGAGCATTGCTCTCCCTGTTTGTATATCA +
Preference number: 3 (lower is better)
Translates to: QSSTRRCPSEYP*ALSIALPVCIS
Trigger: TGATATACAAACAGGGAGAGCAATGCTCAGAGCCCAGGGATACTCACTGGGGCACCTCCTAGTACTGCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433011.5
3UTR-3UTR CAA 90 bp CCCAGGACTATTAGGCAAAGCAGTACTAGGAGGTGCCCCAGTGAGTATCCCTGGTCTCAGAAGTGTGCTTaGCATATACACTTTCTCAGG +
Preference number: 3 (lower is better)
Translates to: PRTIRQSSTRRCPSEYPWSQKCA*HIHFLR
Trigger: CCTGAGAAAGTGTATATGCAAAGCACACTTCTGAGA...CCAGGGATACTCACTGGGGCACCTCCTAGTACTGCTTTGCCTAATAGTCCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433011.5
3UTR GCA 72 bp TGTTTGCTTTCTCGAACCACTTCTTGTACCAACTGTTaGAGGTTGGCTTCCCAGGAAGCAGGCCCAGAGATA +
Preference number: 3 (lower is better)
Translates to: CLLSRTTSCTNC*RLASQEAGPEI
Trigger: TATCTCTGGGCCTGCTTCCTGGGAAGCCAACCTGCAACAGTTGGTACAAGAAGTGGTTCGAGAAAGCAAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
ENST00000455331.5
3UTR CCA 72 bp TCCATTGACCAAACCCAAGCAGAAGTCAATTACAAATaGAGTCTGGGGGATGCAGTCCCTAAGGATCAGCCG +
Preference number: 3 (lower is better)
Translates to: SIDQTQAEVNYK*SLGDAVPKDQP
Trigger: CGGCTGATCCTTAGGGACTGCATCCCCCAGACTCCATTTGTAATTGACTTCTGCTTGGGTTTGGTCAATGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433011.5
3UTR-3UTR CAA 90 bp CCCAGGACTATTAGGCAAAGCAGTACTAGGAGGTGCCCCAGTGAGTATCCCTGGAAAGGATTCCATATATaGAAGCAAGATGGAGTGCCA +
Preference number: 3 (lower is better)
Translates to: PRTIRQSSTRRCPSEYPWKGFHI*KQDGVP
Trigger: TGGCACTCCATCTTGCTTCAATATATGGAATCCTTT...CCAGGGATACTCACTGGGGCACCTCCTAGTACTGCTTTGCCTAATAGTCCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433011.5
3UTR TCA 72 bp GGGCTGCGTGCAGTACTGATAATGCCAAGGCTGCAGTaGGCTAACTTGCATTTTTCTATCAGACGAGGGTTT +
Preference number: 3 (lower is better)
Translates to: GLRAVLIMPRLQ*ANLHFSIRRGF
Trigger: AAACCCTCGTCTGATAGAAAAATGCAAGTTAGCTCACTGCAGCCTTGGCATTATCAGTACTGCACGCAGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445416.5
3UTR GCA 72 bp AAATCTCAGTTGGAAATGCAGAAATCACCCGTCTTCTaGAACGATCACACTGGAAGCTGTAGACCGGAGCTG +
Preference number: 3 (lower is better)
Translates to: KSQLEMQKSPVF*NDHTGSCRPEL
Trigger: CAGCTCCGGTCTACAGCTTCCAGTGTGATCGTTGCAGAAGACGGGTGATTTCTGCATTTCCAACTGAGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433011.5
ENST00000442270.5
3UTR CCA 72 bp CAGGAAGCTACTGGAAGATATGTTAGTTTTGAGGGCTaGGAAGTTCAAGACTGGGCAGTCACATCCGACAAC +
Preference number: 3 (lower is better)
Translates to: QEATGRYVSFEG*EVQDWAVTSDN
Trigger: GTTGTCGGATGTGACTGCCCAGTCTTGAACTTCCCAGCCCTCAAAACTAACATATCTTCCAGTAGCTTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354842.4
ENST00000442270.5
ENST00000452188.5
3UTR-3UTR CAA 90 bp AAATTCGAAGAGTTCAAATCAGGATTAATCCTCTCCCTCTCCCAAATCTTCTCCACCAACTGTTGCAGGTaGGCTTCCCAGGAAGCAGGC +
Preference number: 3 (lower is better)
Translates to: KFEEFKSGLILSLSQIFSTNCCR*ASQEAG
Trigger: GCCTGCTTCCTGGGAAGCCAACCTGCAACAGTTGGT...GGAGAAGATTTGGGAGAGGGAGAGGATTAATCCTGATTTGAACTCTTCGAATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
3UTR-3UTR CAA 90 bp ATTATGCGTGGCTTAACCCTAGTTATAGGCCCAGTGGCCAGGATAGGAGGTGCGAAAGGATTCCATATATaGAAGCAAGATGGAGTGCCA +
Preference number: 3 (lower is better)
Translates to: IMRGLTLVIGPVARIGGAKGFHI*KQDGVP
Trigger: TGGCACTCCATCTTGCTTCAATATATGGAATCCTTT...CGCACCTCCTATCCTGGCCACTGGGCCTATAACTAGGGTTAAGCCACGCATAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
ENST00000455331.5
3UTR-3UTR CAA 90 bp AGTGGCCAGGATAGGAGGTGCGGGCAGATTCTGAGGAAAACCCAGGTTATCTTAAAAGGATTCCATATATaGAAGCAAGATGGAGTGCCA +
Preference number: 3 (lower is better)
Translates to: SGQDRRCGQILRKTQVILKGFHI*KQDGVP
Trigger: TGGCACTCCATCTTGCTTCAATATATGGAATCCTTT...TAAGATAACCTGGGTTTTCCTCAGAATCTGCCCGCACCTCCTATCCTGGCCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
ENST00000455331.5
3UTR-3UTR CAA 90 bp CTCTTCTTCCCTCCAAAGCTGTGCCAGGGCATTCCATTGACCAAACCCAAGCAGGTGATGACAGAATCATaGTCAGCAAAGAAGGTAAAT +
Preference number: 3 (lower is better)
Translates to: LFFPPKLCQGIPLTKPKQVMTES*SAKKVN
Trigger: ATTTACCTTCTTTGCTGACAATGATTCTGTCATCAC...CTGCTTGGGTTTGGTCAATGGAATGCCCTGGCACAGCTTTGGAGGGAAGAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000452188.5
3UTR TCA 72 bp CCCAGGTTATCTTACAGGGGAAAGGATTCCATATATTaGAGCAAGATGGAGTGCCAGCCCTTAATAGGGAGG +
Preference number: 3 (lower is better)
Translates to: PRLSYRGKDSIY*SKMECQPLIGR
Trigger: CCTCCCTATTAAGGGCTGGCACTCCATCTTGCTTCAATATATGGAATCCTTTCCCCTGTAAGATAACCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
ENST00000455331.5
3UTR TCA 72 bp TCTTCTTCCCTCCAAAGCTGTGCCAGGGCATTCCATTaGCCAAACCCAAGCAGAAGTCAATTACAAATGGAG +
Preference number: 3 (lower is better)
Translates to: SSSLQSCARAFH*PNPSRSQLQME
Trigger: CTCCATTTGTAATTGACTTCTGCTTGGGTTTGGTCAATGGAATGCCCTGGCACAGCTTTGGAGGGAAGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000452188.5
3UTR CCA 72 bp CCTAACACCATGGGACTGGCTGATGCCCCTAAGGAATaGTGTCTTATAAAGGCTCATCATCTTCTCTGTTGT +
Preference number: 3 (lower is better)
Translates to: PNTMGLADAPKE*CLIKAHHLLCC
Trigger: ACAACAGAGAAGATGATGAGCCTTTATAAGACACCATTCCTTAGGGGCATCAGCCAGTCCCATGGTGTTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000452188.5
3UTR CCA 72 bp GATTGTGAGTTATCTGCGCAGGAGGGGTGTGTGTCCTaGACCATGAAGAAAGACAGGCTTATAGATTATCTG +
Preference number: 3 (lower is better)
Translates to: DCELSAQEGCVS*TMKKDRLIDYL
Trigger: CAGATAATCTATAAGCCTGTCTTTCTTCATGGTCCAGGACACACACCCCTCCTGCGCAGATAACTCACAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445416.5
3UTR-3UTR CAA 90 bp AGCACAAGAACTCTCCCACTCCAAAGAGACTGCATTCATACCCTCATCAGGAGAAAAGGATTCCATATATaGAAGCAAGATGGAGTGCCA +
Preference number: 3 (lower is better)
Translates to: STRTLPLQRDCIHTLIRRKGFHI*KQDGVP
Trigger: TGGCACTCCATCTTGCTTCAATATATGGAATCCTTT...TCTCCTGATGAGGGTATGAATGCAGTCTCTTTGGAGTGGGAGAGTTCTTGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
3UTR-3UTR CAA 90 bp ATGATGATTAAGGCATTCTGGAAGTCCATGGAGATGGTGATGACAGAATCATTGTGTCTCTCTGAGTCTTaGATCCCTTTTCCCGCCATC +
Preference number: 3 (lower is better)
Translates to: MMIKAFWKSMEMVMTESLCLSES*IPFPAI
Trigger: GATGGCGGGAAAAGGGATCAAAGACTCAGAGAGACA...CAATGATTCTGTCATCACCATCTCCATGGACTTCCAGAATGCCTTAATCATCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000452188.5
3UTR TCA 72 bp GCAAGAAAGCAACAAGCAAATCAGGAAGAGAGGAGCTaGCTGCAAAAAGACAAAGGCTTGCTGGCGATTTTT +
Preference number: 3 (lower is better)
Translates to: ARKQQANQEERS*LQKDKGLLAIF
Trigger: AAAAATCGCCAGCAAGCCTTTGTCTTTTTGCAGTCAGCTCCTCTCTTCCTGATTTGCTTGTTGCTTTCTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445416.5
3UTR GCA 72 bp CTTATAGATTATCTGCTTTCTCTTCTTGCTTTCTCCTaGTCCCGCCAGCCTGACTCCTTTTCCTTTATTAGG +
Preference number: 3 (lower is better)
Translates to: LIDYLLSLLAFS*SRQPDSFSFIR
Trigger: CCTAATAAAGGAAAAGGAGTCAGGCTGGCGGGAGCAGGAGAAAGCAAGAAGAGAAAGCAGATAATCTATAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445416.5
3UTR CCA 72 bp TCCATTGACCAAACCCAAGCAGAAGTCAATTACAAATaGAGTCTGGGGGATGCAGTCCCATTAAATGAGTTC +
Preference number: 3 (lower is better)
Translates to: SIDQTQAEVNYK*SLGDAVPLNEF
Trigger: GAACTCATTTAATGGGACTGCATCCCCCAGACTCCATTTGTAATTGACTTCTGCTTGGGTTTGGTCAATGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354842.4
ENST00000442270.5
ENST00000452188.5
3UTR-3UTR CAA 90 bp GAGTTCGTGTCATTTCCTGTGGTTTTCTCCAGGGTATTAAATCCTGTATTCTGGTTCTCGAACCACTTCTaGTACCAACTGTTGCAGGTT +
Preference number: 3 (lower is better)
Translates to: EFVSFPVVFSRVLNPVFWFSNHF*YQLLQV
Trigger: AACCTGCAACAGTTGGTACAAGAAGTGGTTCGAGAA...CCAGAATACAGGATTTAATACCCTGGAGAAAACCACAGGAAATGACACGAACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
3UTR-3UTR CAA 90 bp CATTCCATTGACCAAACCCAAGCAGAAGTCAATTACAAATGGAGTCTGGGGGATGAAGATATGTTAGTTTaGAGGGCTGGGAAGTTCAAG +
Preference number: 3 (lower is better)
Translates to: HSIDQTQAEVNYKWSLGDEDMLV*RAGKFK
Trigger: CTTGAACTTCCCAGCCCTCAAAACTAACATATCTTC...ATCCCCCAGACTCCATTTGTAATTGACTTCTGCTTGGGTTTGGTCAATGGAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354842.4
ENST00000442270.5
ENST00000452188.5
3UTR TCA 72 bp TTACAAATGGAGTCTGGGGGATGCAGTCCCATTAAATaGGTTCCTTGGTCAGAGACAACTTTGTGTAGGATA +
Preference number: 3 (lower is better)
Translates to: LQMESGGCSPIK*VPWSETTLCRI
Trigger: TATCCTACACAAAGTTGTCTCTGACCAAGGAACTCATTTAATGGGACTGCATCCCCCAGACTCCATTTGTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354842.4
ENST00000442270.5
ENST00000452188.5
3UTR CCA 72 bp TTGCATTTTTCTATCAGACGAGGGTTTGGTAATAGCTaGACACAAGAAGATTGTGAGTTATCTGCGCAGGAG +
Preference number: 3 (lower is better)
Translates to: LHFSIRRGFGNS*TQEDCELSAQE
Trigger: CTCCTGCGCAGATAACTCACAATCTTCTTGTGTCCAGCTATTACCAAACCCTCGTCTGATAGAAAAATGCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445416.5
3UTR-3UTR CAA 90 bp CTAAAATCTCAGTTGGAAATGCAGAAATCACCCGTCTTCTGCAACGATCACACTTCTCAGAAGTGTGCTTaGCATATACACTTTCTCAGG +
Preference number: 3 (lower is better)
Translates to: LKSQLEMQKSPVFCNDHTSQKCA*HIHFLR
Trigger: CCTGAGAAAGTGTATATGCAAAGCACACTTCTGAGA...AGTGTGATCGTTGCAGAAGACGGGTGATTTCTGCATTTCCAACTGAGATTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433011.5
ENST00000442270.5
3UTR-3UTR CAA 90 bp GAAGTCCATGGAGATGGTGATGACAGAATCATTGTCAGCAAAGAAGGTAAATGTTCATCATCTTCTCTGTaGTCAGGTTGGGCACTTAGT +
Preference number: 3 (lower is better)
Translates to: EVHGDGDDRIIVSKEGKCSSSSL*SGWALS
Trigger: ACTAAGTGCCCAACCTGACAACAGAGAAGATGATGA...ACATTTACCTTCTTTGCTGACAATGATTCTGTCATCACCATCTCCATGGACTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000452188.5
3UTR TCA 72 bp TCCCAACACTGTCACATTGGGAACCCATCCTCAACATaGCTTTGGATGGGGATAAACCATATTCAAATCATA +
Preference number: 3 (lower is better)
Translates to: SQHCHIGNPSST*LWMGINHIQII
Trigger: TATGATTTGAATATGGTTTATCCCCATCCAAAGTCATGTTGAGGATGGGTTCCCAATGTGACAGTGTTGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
3UTR-3UTR CAA 90 bp GAGTTCGTGTCATTTCCTGTGGTTTTCTCCAGGGTATTAAATCCTGTATTCTGGTCCCGAAACTCTTTGTaGGTGTATTCTCTTTCTTTC +
Preference number: 3 (lower is better)
Translates to: EFVSFPVVFSRVLNPVFWSRNSL*VYSLSF
Trigger: GAAAGAAAGAGAATACACCAACAAAGAGTTTCGGGA...CCAGAATACAGGATTTAATACCCTGGAGAAAACCACAGGAAATGACACGAACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
3UTR-3UTR CAA 90 bp ATGATGATTAAGGCATTCTGGAAGTCCATGGAGATGGTGATGACAGAATCATTGAAAGGATTCCATATATaGAAGCAAGATGGAGTGCCA +
Preference number: 3 (lower is better)
Translates to: MMIKAFWKSMEMVMTESLKGFHI*KQDGVP
Trigger: TGGCACTCCATCTTGCTTCAATATATGGAATCCTTT...CAATGATTCTGTCATCACCATCTCCATGGACTTCCAGAATGCCTTAATCATCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000452188.5
3UTR-3UTR CAA 90 bp GAAGTCCATGGAGATGGTGATGACAGAATCATTGTCAGCAAAGAAGGTAAATGTTCCCGAAACTCTTTGTaGGTGTATTCTCTTTCTTTC +
Preference number: 3 (lower is better)
Translates to: EVHGDGDDRIIVSKEGKCSRNSL*VYSLSF
Trigger: GAAAGAAAGAGAATACACCAACAAAGAGTTTCGGGA...ACATTTACCTTCTTTGCTGACAATGATTCTGTCATCACCATCTCCATGGACTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000452188.5
3UTR CCA 72 bp GAGCTCAATCTGCTTAGCAACAGCCGCCCAATTTTCTaGCCTTCCTTATATTTAATATATCCCATATTTCTC +
Preference number: 3 (lower is better)
Translates to: ELNLLSNSRPIF*PSLYLIYPIFL
Trigger: GAGAAATATGGGATATATTAAATATAAGGAAGGCCAGAAAATTGGGCGGCTGTTGCTAAGCAGATTGAGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
3UTR TCA 72 bp GTGAATCTTTGGATGTGCACTTCACTTACCATTAAATaGGTTCCTTGGTCAGAGACAACTTTGTGTAGGATA +
Preference number: 3 (lower is better)
Translates to: VNLWMCTSLTIK*VPWSETTLCRI
Trigger: TATCCTACACAAAGTTGTCTCTGACCAAGGAACTCATTTAATGGTAAGTGAAGTGCACATCCAAAGATTCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433011.5
3UTR CCA 72 bp CAGAATGTAGTCTCAGCTTTTAATATAATGGAACCATaGCTTTATTCCCTGGTGAAAGCATTCATCCCTGAT +
Preference number: 3 (lower is better)
Translates to: QNVVSAFNIMEP*LYSLVKAFIPD
Trigger: ATCAGGGATGAATGCTTTCACCAGGGAATAAAGCCATGGTTCCATTATATTAAAAGCTGAGACTACATTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433011.5
3UTR CCA 72 bp CCTGTGGTTTTCTCCAGGGTATTAAATCCTGTATTCTaGGAAAGCACTTTCAAATTGATTAATTCTCCCATA +
Preference number: 3 (lower is better)
Translates to: PVVFSRVLNPVF*ESTFKLINSPI
Trigger: TATGGGAGAATTAATCAATTTGAAAGTGCTTTCCCAGAATACAGGATTTAATACCCTGGAGAAAACCACAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
3UTR-3UTR CAA 90 bp ACAGCTGATCCCATAACTAAGCTTCCAGTAAGTTATTTATTTTTGTGTAAGGCAGTGATGACAGAATCATaGTCAGCAAAGAAGGTAAAT +
Preference number: 3 (lower is better)
Translates to: TADPITKLPVSYLFLCKAVMTES*SAKKVN
Trigger: ATTTACCTTCTTTGCTGACAATGATTCTGTCATCAC...TGCCTTACACAAAAATAAATAACTTACTGGAAGCTTAGTTATGGGATCAGCTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433011.5
3UTR TCA 72 bp ATTCCCCTTACAGAAACCTGGTCAAAATTATTTCCCTaGTGTAGTGACCCTAATCTTCAATCCTGTATTTAT +
Preference number: 3 (lower is better)
Translates to: IPLTETWSKLFP*CSDPNLQSCIY
Trigger: ATAAATACAGGATTGAAGATTAGGGTCACTACATCAGGGAAATAATTTTGACCAGGTTTCTGTAAGGGGAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433011.5
3UTR CCA 72 bp TTTAATATATCCCATATTTCTCAAAGGTCTGATACATaGCACCAGTTAATGTGTCCCATTTTACCAGTATGC +
Preference number: 3 (lower is better)
Translates to: FNISHISQRSDT*HQLMCPILPVC
Trigger: GCATACTGGTAAAATGGGACACATTAACTGGTGCCATGTATCAGACCTTTGAGAAATATGGGATATATTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
CDS-3UTR TCA 90 bp TTCTTGTACCAACTGTTGCAGGTTGGCTTCCCAGGAAGCAGGCCCAGAGATAGAGTGGGTGTAGGCCTGTaGGGGTGCTGGTCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: FLYQLLQVGFPGSRPRDRVGVGL*GCWSSA
Trigger: GGCTGAAGACCAGCACCCTCACAGGCCTACACCCAC...TCTATCTCTGGGCCTGCTTCCTGGGAAGCCAACCTGCAACAGTTGGTACAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR GCA 90 bp CAAAGCAGTACTAGGAGGTGCCCCAGTGAGTATCCCTGGGCTCTGAGCATTGCTCCAGATCACCAGTCCTaGAGTCACCCAGCCCACTTC +
Preference number: 4 (lower is better)
Translates to: QSSTRRCPSEYPWALSIAPDHQS*SHPAHF
Trigger: GAAGTGGGCTGGGTGACTGCAGGACTGGTGATCTGG...AGCAATGCTCAGAGCCCAGGGATACTCACTGGGGCACCTCCTAGTACTGCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433011.5
CDS-3UTR TCA 90 bp CACAAATGCCTCTTAAGGGTACCACCTCCCAACACTGTCACATTGGGAACCCATGTGGGTGTAGGCCTGTaGGGGTGCTGGTCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: HKCLLRVPPPNTVTLGTHVGVGL*GCWSSA
Trigger: GGCTGAAGACCAGCACCCTCACAGGCCTACACCCAC...ATGGGTTCCCAATGTGACAGTGTTGGGAGGTGGTACCCTTAAGAGGCATTTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
CDS-3UTR TCA 90 bp CCTAGTTATAGGCCCAGTGGCCAGGATAGGAGGTGCGGGCAGATTCTGAGGAAATCACTGCCTCTGTCATaGCCAGTGTTCCAGCCACCA +
Preference number: 4 (lower is better)
Translates to: PSYRPSGQDRRCGQILRKSLPLS*PVFQPP
Trigger: TGGTGGCTGGAACACTGGTCATGACAGAGGCAGTGA...TTTCCTCAGAATCTGCCCGCACCTCCTATCCTGGCCACTGGGCCTATAACTAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR TCA 90 bp AAACATAGCCCAAATCAGAGTGGGAGCAGTGAAGAAATACATTGTCTTCTCTCTTCTGCTGCCTCCCGCTaGAGCCCCAGCCCGGCCGCG +
Preference number: 4 (lower is better)
Translates to: KHSPNQSGSSEEIHCLLSSAASR*SPSPAA
Trigger: CGCGGCCGGGCTGGGGCTTCAGCGGGAGGCAGCAGA...AGAGAGAAGACAATGTATTTCTTCACTGCTCCCACTCTGATTTGGGCTATGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433011.5
CDS-3UTR GCA 90 bp GTTTGCTTTCTCGAACCACTTCTTGTACCAACTGTTGCAGGTTGGCTTCCCAGGCCGTTCTCTGGTCTGTaGTCGGTGCCCCAGTGCGCA +
Preference number: 4 (lower is better)
Translates to: VCFLEPLLVPTVAGWLPRPFSGL*SVPQCA
Trigger: TGCGCACTGGGGCACCGAGCACAGACCAGAGAACGG...CCTGGGAAGCCAACCTGCAACAGTTGGTACAAGAAGTGGTTCGAGAAAGCAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445416.5
CDS-3UTR GCA 90 bp AAGATGGAGTGCCAGCCCTTAATAGGGAGGAGTAGGACACTTCTCAAGGGGCTCGCCCTGCAGCAGACATaGAGGCAGATCTCCATGCTT +
Preference number: 4 (lower is better)
Translates to: KMECQPLIGRSRTLLKGLALQQT*RQISML
Trigger: AAGCATGGAGATCTGCCTGCATGTCTGCTGCAGGGC...GAGCCCCTTGAGAAGTGTCCTACTCCTCCCTATTAAGGGCTGGCACTCCATCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR GCA 90 bp AGTGGCCAGGATAGGAGGTGCGGGCAGATTCTGAGGAAAACCCAGGTTATCTTACCAGATCACCAGTCCTaGAGTCACCCAGCCCACTTC +
Preference number: 4 (lower is better)
Translates to: SGQDRRCGQILRKTQVILPDHQS*SHPAHF
Trigger: GAAGTGGGCTGGGTGACTGCAGGACTGGTGATCTGG...TAAGATAACCTGGGTTTTCCTCAGAATCTGCCCGCACCTCCTATCCTGGCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR GCA 90 bp TCTTGTACCAACTGTTGCAGGTTGGCTTCCCAGGAAGCAGGCCCAGAGATAGAGGGCCAGGATAGGAGGTaGGGGCAGATTCTGAGGAAA +
Preference number: 4 (lower is better)
Translates to: SCTNCCRLASQEAGPEIEGQDRR*GQILRK
Trigger: TTTCCTCAGAATCTGCCCGCACCTCCTATCCTGGCC...CTCTATCTCTGGGCCTGCTTCCTGGGAAGCCAACCTGCAACAGTTGGTACAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CCA 90 bp CTCTTCTTCCCTCCAAAGCTGTGCCAGGGCATTCCATTGACCAAACCCAAGCAGAGAGCGCACTCGGGCTaGGGTAAAGAGAGTGGTAGT +
Preference number: 4 (lower is better)
Translates to: LFFPPKLCQGIPLTKPKQRAHSG*GKESGS
Trigger: ACTACCACTCTCTTTACCCCAGCCCGAGTGCGCTCT...CTGCTTGGGTTTGGTCAATGGAATGCCCTGGCACAGCTTTGGAGGGAAGAAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
CDS-3UTR CCA 90 bp TCTTGTACCAACTGTTGCAGGTTGGCTTCCCAGGAAGCAGGCCCAGAGATAGAGCCCCAACCATTGCCTTaGCCTGAGAGTTGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: SCTNCCRLASQEAGPEIEPQPLP*PESWLC
Trigger: ACAGAGCCAACTCTCAGGCCAAGGCAATGGTTGGGG...CTCTATCTCTGGGCCTGCTTCCTGGGAAGCCAACCTGCAACAGTTGGTACAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CCA 90 bp TCTTGTACCAACTGTTGCAGGTTGGCTTCCCAGGAAGCAGGCCCAGAGATAGAGTCTTGGCCTCTGTCTTaGCAACCAGCGCCCAAGCTT +
Preference number: 4 (lower is better)
Translates to: SCTNCCRLASQEAGPEIESWPLS*QPAPKL
Trigger: AAGCTTGGGCGCTGGTTGCCAAGACAGAGGCCAAGA...CTCTATCTCTGGGCCTGCTTCCTGGGAAGCCAACCTGCAACAGTTGGTACAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR TCA 90 bp ATGCAGTCCCTGCCAATAAAACATAGCCCAAATCAGAGTGGGAGCAGTGAAGAAGTGGGTGTAGGCCTGTaGGGGTGCTGGTCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: MQSLPIKHSPNQSGSSEEVGVGL*GCWSSA
Trigger: GGCTGAAGACCAGCACCCTCACAGGCCTACACCCAC...TTCTTCACTGCTCCCACTCTGATTTGGGCTATGTTTTATTGGCAGGGACTGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
CDS-3UTR TCA 90 bp AAGATGGAGTGCCAGCCCTTAATAGGGAGGAGTAGGACACTTCTCAAGGGGCTCACTTTGGACTCAGATTaGGTCTCTGGCTCTGCCCCA +
Preference number: 4 (lower is better)
Translates to: KMECQPLIGRSRTLLKGLTLDSD*VSGSAP
Trigger: TGGGGCAGAGCCAGAGACTCAATCTGAGTCCAAAGT...GAGCCCCTTGAGAAGTGTCCTACTCCTCCCTATTAAGGGCTGGCACTCCATCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR GCA 90 bp TTCTTGTACCAACTGTTGCAGGTTGGCTTCCCAGGAAGCAGGCCCAGAGATAGACCTCGCCGCAAACAGTaGTACACCGAACTACTGCTC +
Preference number: 4 (lower is better)
Translates to: FLYQLLQVGFPGSRPRDRPRRKQ*YTELLL
Trigger: GAGCAGTAGTTCGGTGTAGCACTGTTTGCGGCGAGG...TCTATCTCTGGGCCTGCTTCCTGGGAAGCCAACCTGCAACAGTTGGTACAAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
CDS-3UTR GCA 90 bp AGTGGCCAGGATAGGAGGTGCGGGCAGATTCTGAGGAAAACCCAGGTTATCTTAGCCCTGCAGCAGACATaGAGGCAGATCTCCATGCTT +
Preference number: 4 (lower is better)
Translates to: SGQDRRCGQILRKTQVILALQQT*RQISML
Trigger: AAGCATGGAGATCTGCCTGCATGTCTGCTGCAGGGC...TAAGATAACCTGGGTTTTCCTCAGAATCTGCCCGCACCTCCTATCCTGGCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR GCA 90 bp AGTGGCCAGGATAGGAGGTGCGGGCAGATTCTGAGGAAAACCCAGGTTATCTTAAAAGGCCACTACAGCTaGCTCTGGAGGTGGACCTGT +
Preference number: 4 (lower is better)
Translates to: SGQDRRCGQILRKTQVILKGHYS*LWRWTC
Trigger: ACAGGTCCACCTCCAGAGGCAGCTGTAGTGGCCTTT...TAAGATAACCTGGGTTTTCCTCAGAATCTGCCCGCACCTCCTATCCTGGCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR GCA 90 bp CCTAGTTATAGGCCCAGTGGCCAGGATAGGAGGTGCGGGCAGATTCTGAGGAAACCTAGGCCCACTTCTTaGTCCAGTTTCTGCTCCAAT +
Preference number: 4 (lower is better)
Translates to: PSYRPSGQDRRCGQILRKPRPTS*SSFCSN
Trigger: ATTGGAGCAGAAACTGGAGCAAGAAGTGGGCCTAGG...TTTCCTCAGAATCTGCCCGCACCTCCTATCCTGGCCACTGGGCCTATAACTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR GCA 90 bp CATTCCATTGACCAAACCCAAGCAGAAGTCAATTACAAATGGAGTCTGGGGGATCCACTTCCCCTCTGCTaGCTCCCGCTGAAGCCCCAG +
Preference number: 4 (lower is better)
Translates to: HSIDQTQAEVNYKWSLGDPLPLC*LPLKPQ
Trigger: CTGGGGCTTCAGCGGGAGGCAGCAGAGGGGAAGTGG...ATCCCCCAGACTCCATTTGTAATTGACTTCTGCTTGGGTTTGGTCAATGGAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000433011.5
CDS-3UTR CCA 90 bp AGTGGCCAGGATAGGAGGTGCGGGCAGATTCTGAGGAAAACCCAGGTTATCTTACCCCAACCATTGCCTTaGCCTGAGAGTTGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: SGQDRRCGQILRKTQVILPQPLP*PESWLC
Trigger: ACAGAGCCAACTCTCAGGCCAAGGCAATGGTTGGGG...TAAGATAACCTGGGTTTTCCTCAGAATCTGCCCGCACCTCCTATCCTGGCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CCA 90 bp TTCTTGTACCAACTGTTGCAGGTTGGCTTCCCAGGAAGCAGGCCCAGAGATAGATCTTGGCCACTTCCCTaGGTACTGCCAAGGTCTCAC +
Preference number: 4 (lower is better)
Translates to: FLYQLLQVGFPGSRPRDRSWPLP*VLPRSH
Trigger: GTGAGACCTTGGCAGTACCCAGGGAAGTGGCCAAGA...TCTATCTCTGGGCCTGCTTCCTGGGAAGCCAACCTGCAACAGTTGGTACAAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CCA 90 bp TCTTGTACCAACTGTTGCAGGTTGGCTTCCCAGGAAGCAGGCCCAGAGATAGAGTTCCAGTCTTGTTCGTaGCCCCCATCTTGGCCACTT +
Preference number: 4 (lower is better)
Translates to: SCTNCCRLASQEAGPEIEFQSCS*PPSWPL
Trigger: AAGTGGCCAAGATGGGGGCCACGAACAAGACTGGAA...CTCTATCTCTGGGCCTGCTTCCTGGGAAGCCAACCTGCAACAGTTGGTACAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CCA 90 bp TGTTCTGTTAGTTTTGAGGGCTGGGAAGTTCAAGACTGGGCAGTCACATCCGACCCAACTGTTGCAGGTTaGCTTCCCAGGAAGCAGGCC +
Preference number: 4 (lower is better)
Translates to: CSVSFEGWEVQDWAVTSDPTVAG*LPRKQA
Trigger: GGCCTGCTTCCTGGGAAGCCAACCTGCAACAGTTGG...GTCGGATGTGACTGCCCAGTCTTGAACTTCCCAGCCCTCAAAACTAACAGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433011.5
ENST00000445416.5
CDS-3UTR TCA 90 bp TTCTTGTACCAACTGTTGCAGGTTGGCTTCCCAGGAAGCAGGCCCAGAGATAGAACTTTGGACTCAGATTaGGTCTCTGGCTCTGCCCCA +
Preference number: 4 (lower is better)
Translates to: FLYQLLQVGFPGSRPRDRTLDSD*VSGSAP
Trigger: TGGGGCAGAGCCAGAGACTCAATCTGAGTCCAAAGT...TCTATCTCTGGGCCTGCTTCCTGGGAAGCCAACCTGCAACAGTTGGTACAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR GCA 90 bp AAATGCCTCTTAAGGGTACCACCTCCCAACACTGTCACATTGGGAACCCATCCTGCCCTGCAGCAGACATaGAGGCAGATCTCCATGCTT +
Preference number: 4 (lower is better)
Translates to: KCLLRVPPPNTVTLGTHPALQQT*RQISML
Trigger: AAGCATGGAGATCTGCCTGCATGTCTGCTGCAGGGC...AGGATGGGTTCCCAATGTGACAGTGTTGGGAGGTGGTACCCTTAAGAGGCATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
CDS-3UTR GCA 90 bp AAGATGGAGTGCCAGCCCTTAATAGGGAGGAGTAGGACACTTCTCAAGGGGCTCAGTGATCTTAAGCCCTaGAGCAGACATGCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: KMECQPLIGRSRTLLKGLSDLKP*SRHAGR
Trigger: TCTGCCTGCATGTCTGCTGCAGGGCTTAAGATCACT...GAGCCCCTTGAGAAGTGTCCTACTCCTCCCTATTAAGGGCTGGCACTCCATCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR GCA 90 bp CACAAATGCCTCTTAAGGGTACCACCTCCCAACACTGTCACATTGGGAACCCATAGCCCACTTCCTGAATaGGGCCCATGTAATCACCCC +
Preference number: 4 (lower is better)
Translates to: HKCLLRVPPPNTVTLGTHSPLPE*GPCNHP
Trigger: GGGGTGATTACATGGGCCGCATTCAGGAAGTGGGCT...ATGGGTTCCCAATGTGACAGTGTTGGGAGGTGGTACCCTTAAGAGGCATTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
CDS-3UTR GCA 90 bp CCCTTTCCCTGCCTGTCAGTTCAGTGGCACGAGAGGACAAAAATGGCCAGAATGTCTTGCTCCAGTTTCTaGTCCAATCTCGACTTGGGG +
Preference number: 4 (lower is better)
Translates to: PFPCLSVQWHERTKMARMSCSSF*SNLDLG
Trigger: CCCCAAGTCGAGATTGGAGCAGAAACTGGAGCAAGA...CATTCTGGCCATTTTTGTCCTCTCGTGCCACTGAACTGACAGGCAGGGAAAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433011.5
CDS-3UTR CCA 90 bp AGTGGCCAGGATAGGAGGTGCGGGCAGATTCTGAGGAAAACCCAGGTTATCTTACCTACTGCAGGCCTATaGGAAGACCTCCTTGATCCA +
Preference number: 4 (lower is better)
Translates to: SGQDRRCGQILRKTQVILPTAGL*EDLLDP
Trigger: TGGATCAAGGAGGTCTTCCCATAGGCCTGCAGTAGG...TAAGATAACCTGGGTTTTCCTCAGAATCTGCCCGCACCTCCTATCCTGGCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000445416.5
ENST00000455331.5
CDS-3UTR CCA 90 bp AAATGCCTCTTAAGGGTACCACCTCCCAACACTGTCACATTGGGAACCCATCCTAGCTGCCTCTGGAGGTaGACCTGTAATGATCCGAGG +
Preference number: 4 (lower is better)
Translates to: KCLLRVPPPNTVTLGTHPSCLWR*TCNDPR
Trigger: CCTCGGATCATTACAGGTCCACCTCCAGAGGCAGCT...AGGATGGGTTCCCAATGTGACAGTGTTGGGAGGTGGTACCCTTAAGAGGCATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
CDS-3UTR CCA 90 bp CCTAGTTATAGGCCCAGTGGCCAGGATAGGAGGTGCGGGCAGATTCTGAGGAAAAGAGTCCTCACACTCTaGGCTCTTCCCTTGGTAAAT +
Preference number: 4 (lower is better)
Translates to: PSYRPSGQDRRCGQILRKRVLTL*ALPLVN
Trigger: ATTTACCAAGGGAAGAGCCCAGAGTGTGAGGACTCT...TTTCCTCAGAATCTGCCCGCACCTCCTATCCTGGCCACTGGGCCTATAACTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CCA 90 bp ATTATGCGTGGCTTAACCCTAGTTATAGGCCCAGTGGCCAGGATAGGAGGTGCGTTTATGGCCAAGGTCTaGCTCTGTACCCCAACCACA +
Preference number: 4 (lower is better)
Translates to: IMRGLTLVIGPVARIGGAFMAKV*LCTPTT
Trigger: TGTGGTTGGGGTACAGAGCCAGACCTTGGCCATAAA...CGCACCTCCTATCCTGGCCACTGGGCCTATAACTAGGGTTAAGCCACGCATAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CCA 90 bp GTTTGCTTTCTCGAACCACTTCTTGTACCAACTGTTGCAGGTTGGCTTCCCAGGTCTTGGCCTCTGTCTTaGCAACCAGCGCCCAAGCTT +
Preference number: 4 (lower is better)
Translates to: VCFLEPLLVPTVAGWLPRSWPLS*QPAPKL
Trigger: AAGCTTGGGCGCTGGTTGCCAAGACAGAGGCCAAGA...CCTGGGAAGCCAACCTGCAACAGTTGGTACAAGAAGTGGTTCGAGAAAGCAAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CCA 90 bp TACCACCTCCCAACACTGTCACATTGGGAACCCATCCTCAACATGACTTTGGATCCAACTGTTGCAGGTTaGCTTCCCAGGAAGCAGGCC +
Preference number: 4 (lower is better)
Translates to: YHLPTLSHWEPILNMTLDPTVAG*LPRKQA
Trigger: GGCCTGCTTCCTGGGAAGCCAACCTGCAACAGTTGG...ATCCAAAGTCATGTTGAGGATGGGTTCCCAATGTGACAGTGTTGGGAGGTGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
CDS-3UTR CCA 90 bp TCTTGTACCAACTGTTGCAGGTTGGCTTCCCAGGAAGCAGGCCCAGAGATAGAGCTAACACCATGGGACTaGCTGATGCCCCTAAGGAAT +
Preference number: 4 (lower is better)
Translates to: SCTNCCRLASQEAGPEIELTPWD*LMPLRN
Trigger: ATTCCTTAGGGGCATCAGCCAGTCCCATGGTGTTAG...CTCTATCTCTGGGCCTGCTTCCTGGGAAGCCAACCTGCAACAGTTGGTACAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000452188.5
CDS-3UTR CCA 90 bp CACAGTGTTTGCTTTCTCGAACCACTTCTTGTACCAACTGTTGCAGGTTGGCTTGACATCCCCGTTCTCTaGTCTGTGCTCGGTGCCCCA +
Preference number: 4 (lower is better)
Translates to: HSVCFLEPLLVPTVAGWLDIPVL*SVLGAP
Trigger: TGGGGCACCGAGCACAGACCAGAGAACGGGGATGTC...AAGCCAACCTGCAACAGTTGGTACAAGAAGTGGTTCGAGAAAGCAAACACTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445416.5
CDS-3UTR TCA 90 bp CTAAAATCTCAGTTGGAAATGCAGAAATCACCCGTCTTCTGCAACGATCACACTGTGGGTGTAGGCCTGTaGGGGTGCTGGTCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: LKSQLEMQKSPVFCNDHTVGVGL*GCWSSA
Trigger: GGCTGAAGACCAGCACCCTCACAGGCCTACACCCAC...AGTGTGATCGTTGCAGAAGACGGGTGATTTCTGCATTTCCAACTGAGATTTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433011.5
CDS-3UTR TCA 90 bp CACAAATGCCTCTTAAGGGTACCACCTCCCAACACTGTCACATTGGGAACCCATACTTTGGACTCAGATTaGGTCTCTGGCTCTGCCCCA +
Preference number: 4 (lower is better)
Translates to: HKCLLRVPPPNTVTLGTHTLDSD*VSGSAP
Trigger: TGGGGCAGAGCCAGAGACTCAATCTGAGTCCAAAGT...ATGGGTTCCCAATGTGACAGTGTTGGGAGGTGGTACCCTTAAGAGGCATTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
CDS-3UTR TCA 90 bp GCTACTGGAAGATATGTTAGTTTTGAGGGCTGGGAAGTTCAAGACTGGGCAGTCTCACTGCCTCTGTCATaGCCAGTGTTCCAGCCACCA +
Preference number: 4 (lower is better)
Translates to: ATGRYVSFEGWEVQDWAVSLPLS*PVFQPP
Trigger: TGGTGGCTGGAACACTGGTCATGACAGAGGCAGTGA...GACTGCCCAGTCTTGAACTTCCCAGCCCTCAAAACTAACATATCTTCCAGTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354842.4
ENST00000452188.5
CDS-3UTR TCA 90 bp CCCAGGACTATTAGGCAAAGCAGTACTAGGAGGTGCCCCAGTGAGTATCCCTGGAACCCATCCTCAACATaGCTTTGGATGGGGATAAAC +
Preference number: 4 (lower is better)
Translates to: PRTIRQSSTRRCPSEYPWNPSST*LWMGIN
Trigger: GTTTATCCCCATCCAAAGTCATGTTGAGGATGGGTT...CCAGGGATACTCACTGGGGCACCTCCTAGTACTGCTTTGCCTAATAGTCCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433011.5
CDS-3UTR TCA 90 bp ATTATGCGTGGCTTAACCCTAGTTATAGGCCCAGTGGCCAGGATAGGAGGTGCGAAGAAGCTAAAATCTTaGAGGGATGCAGTCCCTGCC +
Preference number: 4 (lower is better)
Translates to: IMRGLTLVIGPVARIGGAKKLKS*RDAVPA
Trigger: GGCAGGGACTGCATCCCTTCAAGATTTTAGCTTCTT...CGCACCTCCTATCCTGGCCACTGGGCCTATAACTAGGGTTAAGCCACGCATAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000452188.5
CDS-3UTR GCA 90 bp AGCACAAGAACTCTCCCACTCCAAAGAGACTGCATTCATACCCTCATCAGGAGACCTCGCCGCAAACAGTaGTACACCGAACTACTGCTC +
Preference number: 4 (lower is better)
Translates to: STRTLPLQRDCIHTLIRRPRRKQ*YTELLL
Trigger: GAGCAGTAGTTCGGTGTAGCACTGTTTGCGGCGAGG...TCTCCTGATGAGGGTATGAATGCAGTCTCTTTGGAGTGGGAGAGTTCTTGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
CDS-3UTR GCA 90 bp CATCAATCCAGATGTCCCCCATTCCAAGTGTCAGAGTCCCATTCCTTCTTAACCGCCCTGCAGCAGACATaGAGGCAGATCTCCATGCTT +
Preference number: 4 (lower is better)
Translates to: HQSRCPPFQVSESHSFLTALQQT*RQISML
Trigger: AAGCATGGAGATCTGCCTGCATGTCTGCTGCAGGGC...GGTTAAGAAGGAATGGGACTCTGACACTTGGAATGGGGGACATCTGGATTGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR GCA 90 bp TTTGCTTTCTCGAACCACTTCTTGTACCAACTGTTGCAGGTTGGCTTCCCAGGAGCCCTGCAGCAGACATaGAGGCAGATCTCCATGCTT +
Preference number: 4 (lower is better)
Translates to: FAFSNHFLYQLLQVGFPGALQQT*RQISML
Trigger: AAGCATGGAGATCTGCCTGCATGTCTGCTGCAGGGC...TCCTGGGAAGCCAACCTGCAACAGTTGGTACAAGAAGTGGTTCGAGAAAGCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR GCA 90 bp TTTGCTTTCTCGAACCACTTCTTGTACCAACTGTTGCAGGTTGGCTTCCCAGGATTGAGTCTCTGGCTCTaGCCCAACCATTGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: FAFSNHFLYQLLQVGFPGLSLWL*PNHCLG
Trigger: GCCAAGGCAATGGTTGGGGCAGAGCCAGAGACTCAA...TCCTGGGAAGCCAACCTGCAACAGTTGGTACAAGAAGTGGTTCGAGAAAGCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR GCA 90 bp CATCAATCCAGATGTCCCCCATTCCAAGTGTCAGAGTCCCATTCCTTCTTAACCGGCCAGGATAGGAGGTaGGGGCAGATTCTGAGGAAA +
Preference number: 4 (lower is better)
Translates to: HQSRCPPFQVSESHSFLTGQDRR*GQILRK
Trigger: TTTCCTCAGAATCTGCCCGCACCTCCTATCCTGGCC...GGTTAAGAAGGAATGGGACTCTGACACTTGGAATGGGGGACATCTGGATTGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR GCA 90 bp CCAGGTTATCTTACAGGGGAAAGGATTCCATATATTGAAGCAAGATGGAGTGCCCCTCGCCGCAAACAGTaGTACACCGAACTGCTCCGC +
Preference number: 4 (lower is better)
Translates to: PGYLTGERIPYIEARWSAPRRKQ*YTELLR
Trigger: GCGGAGCAGTTCGGTGTAGCACTGTTTGCGGCGAGG...GGCACTCCATCTTGCTTCAATATATGGAATCCTTTCCCCTGTAAGATAACCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455331.5
CDS-3UTR CCA 90 bp TTTGCTTTCTCGAACCACTTCTTGTACCAACTGTTGCAGGTTGGCTTCCCAGGAAGAGCGCACTCGGGCTaGGGTAAAGAGAGTGGTAGT +
Preference number: 4 (lower is better)
Translates to: FAFSNHFLYQLLQVGFPGRAHSG*GKESGS
Trigger: ACTACCACTCTCTTTACCCCAGCCCGAGTGCGCTCT...TCCTGGGAAGCCAACCTGCAACAGTTGGTACAAGAAGTGGTTCGAGAAAGCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CCA 90 bp CCCAGGACTATTAGGCAAAGCAGTACTAGGAGGTGCCCCAGTGAGTATCCCTGGTCTCTGCTTCATTTATaGCCAAGGTCTGGCTCTGTA +
Preference number: 4 (lower is better)
Translates to: PRTIRQSSTRRCPSEYPWSLLHL*PRSGSV
Trigger: TACAGAGCCAGACCTTGGCCATAAATGAAGCAGAGA...CCAGGGATACTCACTGGGGCACCTCCTAGTACTGCTTTGCCTAATAGTCCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433011.5
CDS-3UTR CCA 90 bp CATCAATCCAGATGTCCCCCATTCCAAGTGTCAGAGTCCCATTCCTTCTTAACCCCCCAACCATTGCCTTaGCCTGAGAGTTGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: HQSRCPPFQVSESHSFLTPQPLP*PESWLC
Trigger: ACAGAGCCAACTCTCAGGCCAAGGCAATGGTTGGGG...GGTTAAGAAGGAATGGGACTCTGACACTTGGAATGGGGGACATCTGGATTGATG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CCA 90 bp CATCAATCCAGATGTCCCCCATTCCAAGTGTCAGAGTCCCATTCCTTCTTAACCTCTTGGCCACTTCCCTaGGTACTGCCAAGGTCTCAC +
Preference number: 4 (lower is better)
Translates to: HQSRCPPFQVSESHSFLTSWPLP*VLPRSH
Trigger: GTGAGACCTTGGCAGTACCCAGGGAAGTGGCCAAGA...GGTTAAGAAGGAATGGGACTCTGACACTTGGAATGGGGGACATCTGGATTGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CCA 90 bp AAATGCCTCTTAAGGGTACCACCTCCCAACACTGTCACATTGGGAACCCATCCTTTCCAGTCTTGTTCGTaGCCCCCATCTTGGCCACTT +
Preference number: 4 (lower is better)
Translates to: KCLLRVPPPNTVTLGTHPFQSCS*PPSWPL
Trigger: AAGTGGCCAAGATGGGGGCCACGAACAAGACTGGAA...AGGATGGGTTCCCAATGTGACAGTGTTGGGAGGTGGTACCCTTAAGAGGCATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
CDS-3UTR CCA 90 bp CCTAGTTATAGGCCCAGTGGCCAGGATAGGAGGTGCGGGCAGATTCTGAGGAAAGGGCTCAGGGGAATCTaGGGATATAAGATTTTTAGG +
Preference number: 4 (lower is better)
Translates to: PSYRPSGQDRRCGQILRKGLRGI*GYKIFR
Trigger: CCTAAAAATCTTATATCCCCAGATTCCCCTGAGCCC...TTTCCTCAGAATCTGCCCGCACCTCCTATCCTGGCCACTGGGCCTATAACTAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
ENST00000455331.5
3UTR CAA 72 bp GTGTTTGCTTTCTCGAACCACTTCTTGTACCAACTGTaGCAGGTTGGCTTCCCAGGAAGCAGGCCCAGAGAT +
Preference number: 4 (lower is better)
Translates to: VFAFSNHFLYQL*QVGFPGSRPRD
Trigger: ATCTCTGGGCCTGCTTCCTGGGAAGCCAACCTGCAACAGTTGGTACAAGAAGTGGTTCGAGAAAGCAAACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
ENST00000455331.5
3UTR CAA 72 bp CTTTCTCGAACCACTTCTTGTACCAACTGTTGCAGGTaGGCTTCCCAGGAAGCAGGCCCAGAGATAGAGTTC +
Preference number: 4 (lower is better)
Translates to: LSRTTSCTNCCR*ASQEAGPEIEF
Trigger: GAACTCTATCTCTGGGCCTGCTTCCTGGGAAGCCAACCTGCAACAGTTGGTACAAGAAGTGGTTCGAGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442270.5
ENST00000445416.5
CDS-3UTR TCA 90 bp AAAGGGGAAACAGGTACACGCAAAAGACACCAAGCACAAGAGGCAGACTCACTTACCATTGCCTTGGCCTaGGAGTTGGCTCTGTGTATG +
Preference number: 4 (lower is better)
Translates to: KGETGTRKRHQAQEADSLTIALA*ELALCM
Trigger: CATACACAGAGCCAACTCTCAGGCCAAGGCAATGGT...AAGTGAGTCTGCCTCTTGTGCTTGGTGTCTTTTGCGTGTACCTGTTTCCCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
CDS-3UTR TCA 90 bp TCTTGTACCAACTGTTGCAGGTTGGCTTCCCAGGAAGCAGGCCCAGAGATAGAGAACCCATCCTCAACATaGCTTTGGATGGGGATAAAC +
Preference number: 4 (lower is better)
Translates to: SCTNCCRLASQEAGPEIENPSST*LWMGIN
Trigger: GTTTATCCCCATCCAAAGTCATGTTGAGGATGGGTT...CTCTATCTCTGGGCCTGCTTCCTGGGAAGCCAACCTGCAACAGTTGGTACAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
CDS-3UTR TCA 90 bp CCCAGGACTATTAGGCAAAGCAGTACTAGGAGGTGCCCCAGTGAGTATCCCTGGTCAGAGTGGGAGCAGTaGAGAAATACATTGTCTTCT +
Preference number: 4 (lower is better)
Translates to: PRTIRQSSTRRCPSEYPWSEWEQ*RNTLSS
Trigger: AGAAGACAATGTATTTCTTCACTGCTCCCACTCTGA...CCAGGGATACTCACTGGGGCACCTCCTAGTACTGCTTTGCCTAATAGTCCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433011.5
CDS-3UTR GCA 90 bp ATGCAGTCCCTGCCAATAAAACATAGCCCAAATCAGAGTGGGAGCAGTGAAGAACCTCGCCGCAAACAGTaGTACACCGAACTACTGCTC +
Preference number: 4 (lower is better)
Translates to: MQSLPIKHSPNQSGSSEEPRRKQ*YTELLL
Trigger: GAGCAGTAGTTCGGTGTAGCACTGTTTGCGGCGAGG...TTCTTCACTGCTCCCACTCTGATTTGGGCTATGTTTTATTGGCAGGGACTGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354842.4
ENST00000442270.5
ENST00000452188.5
CDS-3UTR GCA 90 bp TTGATCCCTTTTCCCGCCATCTTCTATGGCAACTCTGGCATTTACACCTCACTTAAAGGCCACTACAGCTaGCTCTGGAGGTGGACCTGT +
Preference number: 4 (lower is better)
Translates to: LIPFPAIFYGNSGIYTSLKGHYS*LWRWTC
Trigger: ACAGGTCCACCTCCAGAGGCAGCTGTAGTGGCCTTT...AAGTGAGGTGTAAATGCCAGAGTTGCCATAGAAGATGGCGGGAAAAGGGATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
CDS-3UTR GCA 90 bp ATGCAGTCCCTGCCAATAAAACATAGCCCAAATCAGAGTGGGAGCAGTGAAGAAAGCCCACTTCCTGAATaGGGCCCATGTAATCACCCC +
Preference number: 4 (lower is better)
Translates to: MQSLPIKHSPNQSGSSEESPLPE*GPCNHP
Trigger: GGGGTGATTACATGGGCCGCATTCAGGAAGTGGGCT...TTCTTCACTGCTCCCACTCTGATTTGGGCTATGTTTTATTGGCAGGGACTGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
CDS-3UTR GCA 90 bp TTGATCCCTTTTCCCGCCATCTTCTATGGCAACTCTGGCATTTACACCTCACTTTTGAGTCTCTGGCTCTaGCCCAACCATTGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: LIPFPAIFYGNSGIYTSLLSLWL*PNHCLG
Trigger: GCCAAGGCAATGGTTGGGGCAGAGCCAGAGACTCAA...AAGTGAGGTGTAAATGCCAGAGTTGCCATAGAAGATGGCGGGAAAAGGGATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
CDS-3UTR GCA 90 bp AGCACAAGAACTCTCCCACTCCAAAGAGACTGCATTCATACCCTCATCAGGAGACACTTCCCTGGGTACTaGCAAGGTCTCACTCTGTGT +
Preference number: 4 (lower is better)
Translates to: STRTLPLQRDCIHTLIRRHFPGY*QGLTLC
Trigger: ACACAGAGTGAGACCTTGGCAGTACCCAGGGAAGTG...TCTCCTGATGAGGGTATGAATGCAGTCTCTTTGGAGTGGGAGAGTTCTTGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
CDS-3UTR GCA 90 bp GTTTGCTTTCTCGAACCACTTCTTGTACCAACTGTTGCAGGTTGGCTTCCCAGGTCTGCTTTCTCTTCTTaGTTTCTCCTGCTCCCGCCA +
Preference number: 4 (lower is better)
Translates to: VCFLEPLLVPTVAGWLPRSAFSS*FLLLPP
Trigger: TGGCGGGAGCAGGAGAAAGCAAGAAGAGAAAGCAGA...CCTGGGAAGCCAACCTGCAACAGTTGGTACAAGAAGTGGTTCGAGAAAGCAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445416.5
CDS-3UTR CCA 90 bp GCTGTTACCCTAGGCCTAAGAGGGCAAGAGGAAGAAATAGTATTTCTGGAGCCTCCTACTGCAGGCCTATaGGAAGACCTCCTTGATCCA +
Preference number: 4 (lower is better)
Translates to: AVTLGLRGQEEEIVFLEPPTAGL*EDLLDP
Trigger: TGGATCAAGGAGGTCTTCCCATAGGCCTGCAGTAGG...AGGCTCCAGAAATACTATTTCTTCCTCTTGCCCTCTTAGGCCTAGGGTAACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354842.4
ENST00000433011.5
CDS-3UTR CCA 90 bp GTTTGCTTTCTCGAACCACTTCTTGTACCAACTGTTGCAGGTTGGCTTCCCAGGCACTACAGCTGCCTCTaGAGGTGGACCTGTAATGAT +
Preference number: 4 (lower is better)
Translates to: VCFLEPLLVPTVAGWLPRHYSCL*RWTCND
Trigger: ATCATTACAGGTCCACCTCCAGAGGCAGCTGTAGTG...CCTGGGAAGCCAACCTGCAACAGTTGGTACAAGAAGTGGTTCGAGAAAGCAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CCA 90 bp CCTAGTTATAGGCCCAGTGGCCAGGATAGGAGGTGCGGGCAGATTCTGAGGAAATATGAGTTTCAGCTTTaGTCTGGGTCATTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: PSYRPSGQDRRCGQILRKYEFQL*SGSLLL
Trigger: GAGAAGCAATGACCCAGACCAAAGCTGAAACTCATA...TTTCCTCAGAATCTGCCCGCACCTCCTATCCTGGCCACTGGGCCTATAACTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CCA 90 bp CACAGTGTTTGCTTTCTCGAACCACTTCTTGTACCAACTGTTGCAGGTTGGCTTTCTTGGCCACTTCCCTaGGTACTGCCAAGGTCTCAC +
Preference number: 4 (lower is better)
Translates to: HSVCFLEPLLVPTVAGWLSWPLP*VLPRSH
Trigger: GTGAGACCTTGGCAGTACCCAGGGAAGTGGCCAAGA...AAGCCAACCTGCAACAGTTGGTACAAGAAGTGGTTCGAGAAAGCAAACACTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CCA 90 bp CCAGGTTATCTTACAGGGGAAAGGATTCCATATATTGAAGCAAGATGGAGTGCCCCAACTGTTGCAGGTTaGCTTCCCAGGAAGCAGGCC +
Preference number: 4 (lower is better)
Translates to: PGYLTGERIPYIEARWSAPTVAG*LPRKQA
Trigger: GGCCTGCTTCCTGGGAAGCCAACCTGCAACAGTTGG...GGCACTCCATCTTGCTTCAATATATGGAATCCTTTCCCCTGTAAGATAACCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CCA 90 bp TCTTGTACCAACTGTTGCAGGTTGGCTTCCCAGGAAGCAGGCCCAGAGATAGAGGGGCTCAGGGGAATCTaGGGATATAAGATTTTTAGG +
Preference number: 4 (lower is better)
Translates to: SCTNCCRLASQEAGPEIEGLRGI*GYKIFR
Trigger: CCTAAAAATCTTATATCCCCAGATTCCCCTGAGCCC...CTCTATCTCTGGGCCTGCTTCCTGGGAAGCCAACCTGCAACAGTTGGTACAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CCA 90 bp TTCTTGTACCAACTGTTGCAGGTTGGCTTCCCAGGAAGCAGGCCCAGAGATAGAAGTTCAAGGCCATCCTaGGCAATGTGGCAAAACCAT +
Preference number: 4 (lower is better)
Translates to: FLYQLLQVGFPGSRPRDRSSRPS*AMWQNH
Trigger: ATGGTTTTGCCACATTGCCCAGGATGGCCTTGAACT...TCTATCTCTGGGCCTGCTTCCTGGGAAGCCAACCTGCAACAGTTGGTACAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
CDS-3UTR CCA 90 bp CCTAGTTATAGGCCCAGTGGCCAGGATAGGAGGTGCGGGCAGATTCTGAGGAAAGATGCCCCTAAGGAATaGTGTCTTATAAAGGCTCAT +
Preference number: 4 (lower is better)
Translates to: PSYRPSGQDRRCGQILRKDAPKE*CLIKAH
Trigger: ATGAGCCTTTATAAGACACCATTCCTTAGGGGCATC...TTTCCTCAGAATCTGCCCGCACCTCCTATCCTGGCCACTGGGCCTATAACTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000452188.5
CDS-3UTR CCA 90 bp CAGGGGAAAGGATTCCATATATTGAAGCAAGATGGAGTGCCAGCCCTTAATAGGCCCAGTGAGTATCCCTaGGCTCTGAGCATTGCTCTC +
Preference number: 4 (lower is better)
Translates to: QGKGFHILKQDGVPALNRPSEYP*ALSIAL
Trigger: GAGAGCAATGCTCAGAGCCCAGGGATACTCACTGGG...CCTATTAAGGGCTGGCACTCCATCTTGCTTCAATATATGGAATCCTTTCCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433011.5
CDS-3UTR CCA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGCCCAGGACCCACCACTaGACTGGTCTGCAGGCCCCG +
Preference number: 4 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKPRTHH*TGLQAP
Trigger: CGGGGCCTGCAGACCAGTCCAGTGGTGGGTCCTGGG...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR TCA 90 bp CAAATCCTGAGTCTACTCCTCAGATTTCTCCACCTTCTACCACCAATGATGGAGACCATTGCCTTGGCCTaGGAGTTGGCTCTGTGTATG +
Preference number: 4 (lower is better)
Translates to: QILSLLLRFLHLLPPMMETIALA*ELALCM
Trigger: CATACACAGAGCCAACTCTCAGGCCAAGGCAATGGT...CTCCATCATTGGTGGTAGAAGGTGGAGAAATCTGAGGAGTAGACTCAGGATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455331.5
CDS-3UTR TCA 90 bp AAGATGGAGTGCCAGCCCTTAATAGGGAGGAGTAGGACACTTCTCAAGGGGCTCATATTCCAGCCCTCCTaGTCAAGCTCCTTAGAATTT +
Preference number: 4 (lower is better)
Translates to: KMECQPLIGRSRTLLKGLIFQPS*SSSLEF
Trigger: AAATTCTAAGGAGCTTGATCAGGAGGGCTGGAATAT...GAGCCCCTTGAGAAGTGTCCTACTCCTCCCTATTAAGGGCTGGCACTCCATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
CDS-3UTR TCA 90 bp TTTGCTTTCTCGAACCACTTCTTGTACCAACTGTTGCAGGTTGGCTTCCCAGGAGTCTCTCTGAGTCTTTaGTCCCTTTTCCCGCCATCT +
Preference number: 4 (lower is better)
Translates to: FAFSNHFLYQLLQVGFPGVSLSL*SLFPPS
Trigger: AGATGGCGGGAAAAGGGATCAAAGACTCAGAGAGAC...TCCTGGGAAGCCAACCTGCAACAGTTGGTACAAGAAGTGGTTCGAGAAAGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
CDS-3UTR TCA 90 bp TTGGAAATGCAGAAATCACCCGTCTTCTGCAACGATCACACTGGAAGCTGTAGAAGTATCCCTGGGCTCTaGGCATTGCTCTCCCTGTTT +
Preference number: 4 (lower is better)
Translates to: LEMQKSPVFCNDHTGSCRSIPGL*ALLSLF
Trigger: AAACAGGGAGAGCAATGCTCAGAGCCCAGGGATACT...TCTACAGCTTCCAGTGTGATCGTTGCAGAAGACGGGTGATTTCTGCATTTCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433011.5
CDS-3UTR TCA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGGTCCCCTCACTAGTCTaGCCCCCAGCCCAGAGCCCT +
Preference number: 4 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKVPSLV*PPAQSP
Trigger: AGGGCTCTGGGCTGGGGGTCAGACTAGTGAGGGGAC...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR GCA 90 bp GTTATCTTACAGGGGAAAGGATTCCATATATTGAAGCAAGATGGAGTGCCAGCCAAAGGCCACTACAGCTaGCTCTGGAGGTGGACCTGT +
Preference number: 4 (lower is better)
Translates to: VILQGKGFHILKQDGVPAKGHYS*LWRWTC
Trigger: ACAGGTCCACCTCCAGAGGCAGCTGTAGTGGCCTTT...GGCTGGCACTCCATCTTGCTTCAATATATGGAATCCTTTCCCCTGTAAGATAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR GCA 90 bp TTATGTCTCTCTGAGTCTTTGATCCCTTTTCCCGCCATCTTCTATGGCAACTCTAGCCCACTTCCTGAATaGGGCCCATGTAATCACCCC +
Preference number: 4 (lower is better)
Translates to: LCLSESLIPFPAIFYGNSSPLPE*GPCNHP
Trigger: GGGGTGATTACATGGGCCGCATTCAGGAAGTGGGCT...AGAGTTGCCATAGAAGATGGCGGGAAAAGGGATCAAAGACTCAGAGAGACATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
CDS-3UTR GCA 90 bp ATCTTACAGGGGAAAGGATTCCATATATTGAAGCAAGATGGAGTGCCAGCCCTTAGCCCACTTCCTGAATaGGGCCCATGTAATCACCCC +
Preference number: 4 (lower is better)
Translates to: ILQGKGFHILKQDGVPALSPLPE*GPCNHP
Trigger: GGGGTGATTACATGGGCCGCATTCAGGAAGTGGGCT...AAGGGCTGGCACTCCATCTTGCTTCAATATATGGAATCCTTTCCCCTGTAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR GCA 90 bp ATTAAGGCATTCTGGAAGTCCATGGAGATGGTGATGACAGAATCATTGTCAGCACCAGATCACCAGTCCTaGAGTCACCCAGCCCACTTC +
Preference number: 4 (lower is better)
Translates to: IKAFWKSMEMVMTESLSAPDHQS*SHPAHF
Trigger: GAAGTGGGCTGGGTGACTGCAGGACTGGTGATCTGG...TGCTGACAATGATTCTGTCATCACCATCTCCATGGACTTCCAGAATGCCTTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
CDS-3UTR GCA 90 bp TCAAGACTGGGCAGTCACATCCGACAACTTCTTTTGAGGGCATCAAAACATGGCCCTAGGCCCACTTCTTaGTCCAGTTTCTGCTCCAAT +
Preference number: 4 (lower is better)
Translates to: SRLGSHIRQLLLRASKHGPRPTS*SSFCSN
Trigger: ATTGGAGCAGAAACTGGAGCAAGAAGTGGGCCTAGG...GCCATGTTTTGATGCCCTCAAAAGAAGTTGTCGGATGTGACTGCCCAGTCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
CDS-3UTR GCA 90 bp CACAGTGTTTGCTTTCTCGAACCACTTCTTGTACCAACTGTTGCAGGTTGGCTTCACTTCCCTGGGTACTaGCAAGGTCTCACTCTGTGT +
Preference number: 4 (lower is better)
Translates to: HSVCFLEPLLVPTVAGWLHFPGY*QGLTLC
Trigger: ACACAGAGTGAGACCTTGGCAGTACCCAGGGAAGTG...AAGCCAACCTGCAACAGTTGGTACAAGAAGTGGTTCGAGAAAGCAAACACTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR GCA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGACCACTGGACTGGTCTaGAGGCCCCGGCCTAGCTCC +
Preference number: 4 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKTTGLV*RPRPSS
Trigger: GGAGCTAGGCCGGGGCCTGCAGACCAGTCCAGTGGT...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CCA 90 bp TTGATCCCTTTTCCCGCCATCTTCTATGGCAACTCTGGCATTTACACCTCACTTCCTACTGCAGGCCTATaGGAAGACCTCCTTGATCCA +
Preference number: 4 (lower is better)
Translates to: LIPFPAIFYGNSGIYTSLPTAGL*EDLLDP
Trigger: TGGATCAAGGAGGTCTTCCCATAGGCCTGCAGTAGG...AAGTGAGGTGTAAATGCCAGAGTTGCCATAGAAGATGGCGGGAAAAGGGATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000445416.5
CDS-3UTR CCA 90 bp TACCACCTCCCAACACTGTCACATTGGGAACCCATCCTCAACATGACTTTGGATTTTATGGCCAAGGTCTaGCTCTGTACCCCAACCACA +
Preference number: 4 (lower is better)
Translates to: YHLPTLSHWEPILNMTLDFMAKV*LCTPTT
Trigger: TGTGGTTGGGGTACAGAGCCAGACCTTGGCCATAAA...ATCCAAAGTCATGTTGAGGATGGGTTCCCAATGTGACAGTGTTGGGAGGTGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
CDS-3UTR CCA 90 bp TGTTCTGTTAGTTTTGAGGGCTGGGAAGTTCAAGACTGGGCAGTCACATCCGACGCCTCAGCATCAGTTTaGGTCACTGCTTCTTTCATG +
Preference number: 4 (lower is better)
Translates to: CSVSFEGWEVQDWAVTSDASASV*VTASFM
Trigger: CATGAAAGAAGCAGTGACCCAAACTGATGCTGAGGC...GTCGGATGTGACTGCCCAGTCTTGAACTTCCCAGCCCTCAAAACTAACAGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433011.5
CDS-3UTR CCA 90 bp CAGGGGAAAGGATTCCATATATTGAAGCAAGATGGAGTGCCAGCCCTTAATAGGTTCCAGTCTTGTTCGTaGCCCCCATCTTGGCCACTT +
Preference number: 4 (lower is better)
Translates to: QGKGFHILKQDGVPALNRFQSCS*PPSWPL
Trigger: AAGTGGCCAAGATGGGGGCCACGAACAAGACTGGAA...CCTATTAAGGGCTGGCACTCCATCTTGCTTCAATATATGGAATCCTTTCCCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CCA 90 bp AGTGGCCAGGATAGGAGGTGCGGGCAGATTCTGAGGAAAACCCAGGTTATCTTACCAGAGCTCTTGTCTTaGTTTCATCCACAATTCCAG +
Preference number: 4 (lower is better)
Translates to: SGQDRRCGQILRKTQVILPELLS*FHPQFQ
Trigger: CTGGAATTGTGGATGAAACCAAGACAAGAGCTCTGG...TAAGATAACCTGGGTTTTCCTCAGAATCTGCCCGCACCTCCTATCCTGGCCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CCA 90 bp TTCATCACAGTGTTTGCTTTCTCGAACCACTTCTTGTACCAACTGTTGCAGGTTCCAACTGTTGCAGGTTaGCTTCCCAGGAAGCAGGCC +
Preference number: 4 (lower is better)
Translates to: FITVFAFSNHFLYQLLQVPTVAG*LPRKQA
Trigger: GGCCTGCTTCCTGGGAAGCCAACCTGCAACAGTTGG...AACCTGCAACAGTTGGTACAAGAAGTGGTTCGAGAAAGCAAACACTGTGATGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CCA 90 bp CACAAATGCCTCTTAAGGGTACCACCTCCCAACACTGTCACATTGGGAACCCATTCCCGCCATCTTCTATaGCAACTCTGGCATTTACAC +
Preference number: 4 (lower is better)
Translates to: HKCLLRVPPPNTVTLGTHSRHLL*QLWHLH
Trigger: GTGTAAATGCCAGAGTTGCCATAGAAGATGGCGGGA...ATGGGTTCCCAATGTGACAGTGTTGGGAGGTGGTACCCTTAAGAGGCATTTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
CDS-3UTR CCA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGCTTCAGGCCCCACCTTaGACCCTCCACCAGCCTGGC +
Preference number: 4 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKLQAPP*TLHQPG
Trigger: GCCAGGCTGGTGGAGGGTCCAAGGTGGGGCCTGAAG...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CCA 90 bp AGCACAAGAACTCTCCCACTCCAAAGAGACTGCATTCATACCCTCATCAGGAGACCTACTGCAGGCCTATaGGAAGACACTAACCTCCTT +
Preference number: 4 (lower is better)
Translates to: STRTLPLQRDCIHTLIRRPTAGL*EDTNLL
Trigger: AAGGAGGTTAGTGTCTTCCCATAGGCCTGCAGTAGG...TCTCCTGATGAGGGTATGAATGCAGTCTCTTTGGAGTGGGAGAGTTCTTGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442270.5
ENST00000452188.5
CDS-3UTR TCA 90 bp TCAAGACTGGGCAGTCACATCCGACAACTTCTTTTGAGGGCATCAAAACATGGCACACCCAGTCTATACTaGTCAGGAGCAATCTCCTCT +
Preference number: 4 (lower is better)
Translates to: SRLGSHIRQLLLRASKHGTPSLY*SGAISS
Trigger: AGAGGAGATTGCTCCTGATCAGTATAGACTGGGTGT...GCCATGTTTTGATGCCCTCAAAAGAAGTTGTCGGATGTGACTGCCCAGTCTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354842.4
ENST00000442270.5
ENST00000445416.5
CDS-3UTR TCA 90 bp TTCTTGTACCAACTGTTGCAGGTTGGCTTCCCAGGAAGCAGGCCCAGAGATAGAAAGGATTCCATATATTaGAGCAAGATGGAGTGCCAG +
Preference number: 4 (lower is better)
Translates to: FLYQLLQVGFPGSRPRDRKDSIY*SKMECQ
Trigger: CTGGCACTCCATCTTGCTTCAATATATGGAATCCTT...TCTATCTCTGGGCCTGCTTCCTGGGAAGCCAACCTGCAACAGTTGGTACAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR TCA 90 bp CACAGTGTTTGCTTTCTCGAACCACTTCTTGTACCAACTGTTGCAGGTTGGCTTGTCTCTCTGAGTCTTTaGTCCCTTTTCCCGCCATCT +
Preference number: 4 (lower is better)
Translates to: HSVCFLEPLLVPTVAGWLVSLSL*SLFPPS
Trigger: AGATGGCGGGAAAAGGGATCAAAGACTCAGAGAGAC...AAGCCAACCTGCAACAGTTGGTACAAGAAGTGGTTCGAGAAAGCAAACACTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
CDS-3UTR TCA 90 bp GCTGTTACCCTAGGCCTAAGAGGGCAAGAGGAAGAAATAGTATTTCTGGAGCCTAGGAGAGATTCCCCATaGCACAAATGCCTCTTAAGG +
Preference number: 4 (lower is better)
Translates to: AVTLGLRGQEEEIVFLEPRRDSP*HKCLLR
Trigger: CCTTAAGAGGCATTTGTGTCATGGGGAATCTCTCCT...AGGCTCCAGAAATACTATTTCTTCCTCTTGCCCTCTTAGGCCTAGGGTAACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000452188.5
CDS-3UTR TCA 90 bp TCAAGACTGGGCAGTCACATCCGACAACTTCTTTTGAGGGCATCAAAACATGGCAGGAGAGATTCCCCATaGCACAAATGCCTCTTAAGG +
Preference number: 4 (lower is better)
Translates to: SRLGSHIRQLLLRASKHGRRDSP*HKCLLR
Trigger: CCTTAAGAGGCATTTGTGTCATGGGGAATCTCTCCT...GCCATGTTTTGATGCCCTCAAAAGAAGTTGTCGGATGTGACTGCCCAGTCTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
CDS-3UTR TCA 90 bp CACAGTGTTTGCTTTCTCGAACCACTTCTTGTACCAACTGTTGCAGGTTGGCTTACTAATCCAGTCCCATaGGCACAAGAACTCTCCCAC +
Preference number: 4 (lower is better)
Translates to: HSVCFLEPLLVPTVAGWLTNPVP*AQELSH
Trigger: GTGGGAGAGTTCTTGTGCTCATGGGACTGGATTAGT...AAGCCAACCTGCAACAGTTGGTACAAGAAGTGGTTCGAGAAAGCAAACACTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
CDS-3UTR TCA 90 bp CAGGGGAAAGGATTCCATATATTGAAGCAAGATGGAGTGCCAGCCCTTAATAGGACTAATCCAGTCCCATaGGCACAAGAACTCTCCCAC +
Preference number: 4 (lower is better)
Translates to: QGKGFHILKQDGVPALNRTNPVP*AQELSH
Trigger: GTGGGAGAGTTCTTGTGCTCATGGGACTGGATTAGT...CCTATTAAGGGCTGGCACTCCATCTTGCTTCAATATATGGAATCCTTTCCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
CDS-3UTR TCA 90 bp ATGCAGTCCCTGCCAATAAAACATAGCCCAAATCAGAGTGGGAGCAGTGAAGAAACTAATCCAGTCCCATaGGCACAAGAACTCTCCCAC +
Preference number: 4 (lower is better)
Translates to: MQSLPIKHSPNQSGSSEETNPVP*AQELSH
Trigger: GTGGGAGAGTTCTTGTGCTCATGGGACTGGATTAGT...TTCTTCACTGCTCCCACTCTGATTTGGGCTATGTTTTATTGGCAGGGACTGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000452188.5
CDS-3UTR TCA 90 bp TGGAAGATATGTTCTGTTAGTTTTGAGGGCTGGGAAGTTCAAGACTGGGCAGTCACTAATCCAGTCCCATaGGCACAAGAACTCTCCCAC +
Preference number: 4 (lower is better)
Translates to: WKICSVSFEGWEVQDWAVTNPVP*AQELSH
Trigger: GTGGGAGAGTTCTTGTGCTCATGGGACTGGATTAGT...GACTGCCCAGTCTTGAACTTCCCAGCCCTCAAAACTAACAGAACATATCTTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433011.5
ENST00000445416.5
CDS-3UTR TCA 90 bp CACAAATGCCTCTTAAGGGTACCACCTCCCAACACTGTCACATTGGGAACCCATTGTGGCAAAACCATCTaGAAGATCTCAGAAGTGTGC +
Preference number: 4 (lower is better)
Translates to: HKCLLRVPPPNTVTLGTHCGKTI*KISEVC
Trigger: GCACACTTCTGAGATCTTTCAGATGGTTTTGCCACA...ATGGGTTCCCAATGTGACAGTGTTGGGAGGTGGTACCCTTAAGAGGCATTTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
CDS-3UTR TCA 90 bp TGTTCTGTTAGTTTTGAGGGCTGGGAAGTTCAAGACTGGGCAGTCACATCCGACTGTGGCAAAACCATCTaGAAGATCTCAGAAGTGTGC +
Preference number: 4 (lower is better)
Translates to: CSVSFEGWEVQDWAVTSDCGKTI*KISEVC
Trigger: GCACACTTCTGAGATCTTTCAGATGGTTTTGCCACA...GTCGGATGTGACTGCCCAGTCTTGAACTTCCCAGCCCTCAAAACTAACAGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433011.5
ENST00000445416.5
CDS-3UTR TCA 90 bp TCTTGTACCAACTGTTGCAGGTTGGCTTCCCAGGAAGCAGGCCCAGAGATAGAGCGCCCACCTGAAACCTaGTTTATAACAATTATCTCA +
Preference number: 4 (lower is better)
Translates to: SCTNCCRLASQEAGPEIERPPET*FITIIS
Trigger: TGAGATAATTGTTATAAATCAGGTTTCAGGTGGGCG...CTCTATCTCTGGGCCTGCTTCCTGGGAAGCCAACCTGCAACAGTTGGTACAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433011.5
CDS-3UTR TCA 90 bp AAATTCGAAGAGTTCAAATCAGGATTAATCCTCTCCCTCTCCCAAATCTTCTCCGTAGCCAGATGCGAGTaGCGACTGCAACGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: KFEEFKSGLILSLSQIFSVARCE*RLQRRL
Trigger: CAGCCTTCGTTGCAGTCGTCACTCGCATCTGGCTAC...GGAGAAGATTTGGGAGAGGGAGAGGATTAATCCTGATTTGAACTCTTCGAATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445416.5
ENST00000452188.5
CDS-3UTR GCA 90 bp TTATGTCTCTCTGAGTCTTTGATCCCTTTTCCCGCCATCTTCTATGGCAACTCTGGTAAACAGCCCTACTaGAGGCCTATGGGAAGACCT +
Preference number: 4 (lower is better)
Translates to: LCLSESLIPFPAIFYGNSGKQPY*RPMGRP
Trigger: AGGTCTTCCCATAGGCCTGCAGTAGGGCTGTTTACC...AGAGTTGCCATAGAAGATGGCGGGAAAAGGGATCAAAGACTCAGAGAGACATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000445416.5
CDS-3UTR GCA 90 bp ATGCAGTCCCTGCCAATAAAACATAGCCCAAATCAGAGTGGGAGCAGTGAAGAAAGTGATCTTAAGCCCTaGAGCAGACATGCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: MQSLPIKHSPNQSGSSEESDLKP*SRHAGR
Trigger: TCTGCCTGCATGTCTGCTGCAGGGCTTAAGATCACT...TTCTTCACTGCTCCCACTCTGATTTGGGCTATGTTTTATTGGCAGGGACTGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000452188.5
CDS-3UTR GCA 90 bp CTAAAATCTCAGTTGGAAATGCAGAAATCACCCGTCTTCTGCAACGATCACACTAAAGGCCACTACAGCTaGCTCTGGAGGTGGACCTGT +
Preference number: 4 (lower is better)
Translates to: LKSQLEMQKSPVFCNDHTKGHYS*LWRWTC
Trigger: ACAGGTCCACCTCCAGAGGCAGCTGTAGTGGCCTTT...AGTGTGATCGTTGCAGAAGACGGGTGATTTCTGCATTTCCAACTGAGATTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433011.5
CDS-3UTR GCA 90 bp ATTAAGGCATTCTGGAAGTCCATGGAGATGGTGATGACAGAATCATTGTCAGCATTGAGTCTCTGGCTCTaGCCCAACCATTGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: IKAFWKSMEMVMTESLSALSLWL*PNHCLG
Trigger: GCCAAGGCAATGGTTGGGGCAGAGCCAGAGACTCAA...TGCTGACAATGATTCTGTCATCACCATCTCCATGGACTTCCAGAATGCCTTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
CDS-3UTR GCA 90 bp CATCAATCCAGATGTCCCCCATTCCAAGTGTCAGAGTCCCATTCCTTCTTAACCTTTGGTCTGGGTCATTaGTTCTCTCTTGGCCTCTGT +
Preference number: 4 (lower is better)
Translates to: HQSRCPPFQVSESHSFLTFGLGH*FSLGLC
Trigger: ACAGAGGCCAAGAGAGAAGCAATGACCCAGACCAAA...GGTTAAGAAGGAATGGGACTCTGACACTTGGAATGGGGGACATCTGGATTGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR GCA 90 bp TTTGCTTTCTCGAACCACTTCTTGTACCAACTGTTGCAGGTTGGCTTCCCAGGATTTGGTCTGGGTCATTaGTTCTCTCTTGGCCTCTGT +
Preference number: 4 (lower is better)
Translates to: FAFSNHFLYQLLQVGFPGFGLGH*FSLGLC
Trigger: ACAGAGGCCAAGAGAGAAGCAATGACCCAGACCAAA...TCCTGGGAAGCCAACCTGCAACAGTTGGTACAAGAAGTGGTTCGAGAAAGCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR GCA 90 bp ATTTCATCACAGTGTTTGCTTTCTCGAACCACTTCTTGTACCAACTGTTGCAGGGGCCAGGATAGGAGGTaGGGGCAGATTCTGAGGAAA +
Preference number: 4 (lower is better)
Translates to: ISSQCLLSRTTSCTNCCRGQDRR*GQILRK
Trigger: TTTCCTCAGAATCTGCCCGCACCTCCTATCCTGGCC...CCTGCAACAGTTGGTACAAGAAGTGGTTCGAGAAAGCAAACACTGTGATGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR GCA 90 bp AAATTCGAAGAGTTCAAATCAGGATTAATCCTCTCCCTCTCCCAAATCTTCTCCAGCAGCCCCTTTCCCTaGCTGTCAGTTCAGTGGCAC +
Preference number: 4 (lower is better)
Translates to: KFEEFKSGLILSLSQIFSSSPFP*LSVQWH
Trigger: GTGCCACTGAACTGACAGGCAGGGAAAGGGGCTGCT...GGAGAAGATTTGGGAGAGGGAGAGGATTAATCCTGATTTGAACTCTTCGAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433011.5
CDS-3UTR GCA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGGGGCAGAGTGCCTTGTaGCTGCCCCAGTCCCTGCTT +
Preference number: 4 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKGQSAL*LPQSLL
Trigger: AAGCAGGGACTGGGGCAGGCACAAGGCACTCTGCCC...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR GCA 90 bp ATCTTACAGGGGAAAGGATTCCATATATTGAAGCAAGATGGAGTGCCAGCCCTTGGTAAACAGCCCTACTaGAGGCCTATGGGAAGACAC +
Preference number: 4 (lower is better)
Translates to: ILQGKGFHILKQDGVPALGKQPY*RPMGRH
Trigger: GTGTCTTCCCATAGGCCTGCAGTAGGGCTGTTTACC...AAGGGCTGGCACTCCATCTTGCTTCAATATATGGAATCCTTTCCCCTGTAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442270.5
ENST00000452188.5
CDS-3UTR GCA 90 bp TCCTGGACCATGAAGAAAGACAGGCTTATAGATTATCTGCTTTCTCTTCTTGCTTTAGGACGGTGCTTGTaGTGGAGAGGGCTGCGTGCA +
Preference number: 4 (lower is better)
Translates to: SWTMKKDRLIDYLLSLLALGRCL*WRGLRA
Trigger: TGCACGCAGCCCTCTCCAGCACAAGCACCGTCCTAA...AGCAAGAAGAGAAAGCAGATAATCTATAAGCCTGTCTTTCTTCATGGTCCAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445416.5
CDS-3UTR CCA 90 bp TACCACCTCCCAACACTGTCACATTGGGAACCCATCCTCAACATGACTTTGGATAGAGTCCTCACACTCTaGGCTCTTCCCTTGGTAAAT +
Preference number: 4 (lower is better)
Translates to: YHLPTLSHWEPILNMTLDRVLTL*ALPLVN
Trigger: ATTTACCAAGGGAAGAGCCCAGAGTGTGAGGACTCT...ATCCAAAGTCATGTTGAGGATGGGTTCCCAATGTGACAGTGTTGGGAGGTGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
CDS-3UTR CCA 90 bp TCAAGACTGGGCAGTCACATCCGACAACTTCTTTTGAGGGCATCAAAACATGGCAGAGTCCTCACACTCTaGGCTCTTCCCTTGGTAAAT +
Preference number: 4 (lower is better)
Translates to: SRLGSHIRQLLLRASKHGRVLTL*ALPLVN
Trigger: ATTTACCAAGGGAAGAGCCCAGAGTGTGAGGACTCT...GCCATGTTTTGATGCCCTCAAAAGAAGTTGTCGGATGTGACTGCCCAGTCTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
CDS-3UTR CCA 90 bp AAAGGGGAAACAGGTACACGCAAAAGACACCAAGCACAAGAGGCAGACTCACTTTTCCAGCCACCACTTTaGACTCAGATTGAGTCTCTG +
Preference number: 4 (lower is better)
Translates to: KGETGTRKRHQAQEADSLFQPPL*TQIESL
Trigger: CAGAGACTCAATCTGAGTCCAAAGTGGTGGCTGGAA...AAGTGAGTCTGCCTCTTGTGCTTGGTGTCTTTTGCGTGTACCTGTTTCCCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
CDS-3UTR CCA 90 bp CAGGTTATCTTACAGGGGAAAGGATTCCATATATTGAAGCAAGATGGAGTGCCATCTTGGCCTCTGTCTTaGCAACCAGCGCCCAAGCTT +
Preference number: 4 (lower is better)
Translates to: QVILQGKGFHILKQDGVPSWPLS*QPAPKL
Trigger: AAGCTTGGGCGCTGGTTGCCAAGACAGAGGCCAAGA...TGGCACTCCATCTTGCTTCAATATATGGAATCCTTTCCCCTGTAAGATAACCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CCA 90 bp TTCTTGTACCAACTGTTGCAGGTTGGCTTCCCAGGAAGCAGGCCCAGAGATAGATATGAGTTTCAGCTTTaGTCTGGGTCATTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: FLYQLLQVGFPGSRPRDRYEFQL*SGSLLL
Trigger: GAGAAGCAATGACCCAGACCAAAGCTGAAACTCATA...TCTATCTCTGGGCCTGCTTCCTGGGAAGCCAACCTGCAACAGTTGGTACAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CCA 90 bp ATTTCATCACAGTGTTTGCTTTCTCGAACCACTTCTTGTACCAACTGTTGCAGGTCTTGGCCACTTCCCTaGGTACTGCCAAGGTCTCAC +
Preference number: 4 (lower is better)
Translates to: ISSQCLLSRTTSCTNCCRSWPLP*VLPRSH
Trigger: GTGAGACCTTGGCAGTACCCAGGGAAGTGGCCAAGA...CCTGCAACAGTTGGTACAAGAAGTGGTTCGAGAAAGCAAACACTGTGATGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CCA 90 bp TGTTCTGTTAGTTTTGAGGGCTGGGAAGTTCAAGACTGGGCAGTCACATCCGACGGGCTCAGGGGAATCTaGGGATATAAGATTTTTAGG +
Preference number: 4 (lower is better)
Translates to: CSVSFEGWEVQDWAVTSDGLRGI*GYKIFR
Trigger: CCTAAAAATCTTATATCCCCAGATTCCCCTGAGCCC...GTCGGATGTGACTGCCCAGTCTTGAACTTCCCAGCCCTCAAAACTAACAGAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000433011.5
ENST00000445416.5
CDS-3UTR CCA 90 bp CACAAATGCCTCTTAAGGGTACCACCTCCCAACACTGTCACATTGGGAACCCATGAAGTCAATTACAAATaGAGTCTGGGGGATGCAGTC +
Preference number: 4 (lower is better)
Translates to: HKCLLRVPPPNTVTLGTHEVNYK*SLGDAV
Trigger: GACTGCATCCCCCAGACTCCATTTGTAATTGACTTC...ATGGGTTCCCAATGTGACAGTGTTGGGAGGTGGTACCCTTAAGAGGCATTTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000452188.5
CDS-3UTR CCA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGCCCAGGCCCCACCACTaGACTGATCTACGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKPRPHH*TDLRGP
Trigger: TGGGCCACGTAGATCAGTCCAGTGGTGGGGCCTGGG...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CCA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGGACCCAGCACTGGACTaGTTCGTGGGCCCTGGCCTA +
Preference number: 4 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKDPALD*FVGPGL
Trigger: TAGGCCAGGGCCCACGAACCAGTCCAGTGCTGGGTC...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CCA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGCCTCAGACCCTGGCCTaGAGCCTCCACCAGTCTGGT +
Preference number: 4 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKPQTLA*SLHQSG
Trigger: ACCAGACTGGTGGAGGCTCCAGGCCAGGGTCTGAGG...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CCA 90 bp GAAGAATCCATTCAGTTTCTGCTCATGAAGCATACTAAAAATATCTCAATCCAGGACCCACCACTGGACTaGTCTGCAGGCCCCGGCCTA +
Preference number: 4 (lower is better)
Translates to: EESIQFLLMKHTKNISIQDPPLD*SAGPGL
Trigger: TAGGCCGGGGCCTGCAGACCAGTCCAGTGGTGGGTC...CTGGATTGAGATATTTTTAGTATGCTTCATGAGCAGAAACTGAATGGATTCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR TCA 90 bp TTATGTCTCTCTGAGTCTTTGATCCCTTTTCCCGCCATCTTCTATGGCAACTCTATGGGAAGACCTCCTTaGTCCAGTGCAGTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: LCLSESLIPFPAIFYGNSMGRPP*SSAVFS
Trigger: GGAGAAAACTGCACTGGATCAAGGAGGTCTTCCCAT...AGAGTTGCCATAGAAGATGGCGGGAAAAGGGATCAAAGACTCAGAGAGACATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000445416.5
CDS-3UTR TCA 90 bp ATCTTACAGGGGAAAGGATTCCATATATTGAAGCAAGATGGAGTGCCAGCCCTTATGGGAAGACCTCCTTaGTCCAGTGCAGTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: ILQGKGFHILKQDGVPALMGRPP*SSAVFS
Trigger: GGAGAAAACTGCACTGGATCAAGGAGGTCTTCCCAT...AAGGGCTGGCACTCCATCTTGCTTCAATATATGGAATCCTTTCCCCTGTAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000445416.5
ENST00000455331.5
CDS-3UTR TCA 90 bp CCAGGTTATCTTACAGGGGAAAGGATTCCATATATTGAAGCAAGATGGAGTGCCATGGGAAGACCTCCTTaGTCCAGTGCAGTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: PGYLTGERIPYIEARWSAMGRPP*SSAVFS
Trigger: GGAGAAAACTGCACTGGATCAAGGAGGTCTTCCCAT...GGCACTCCATCTTGCTTCAATATATGGAATCCTTTCCCCTGTAAGATAACCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000445416.5
ENST00000455331.5
CDS-3UTR TCA 90 bp CAGGAAGCTACTGGAAGATATGTTAGTTTTGAGGGCTGGGAAGTTCAAGACTGGACACCCAGTCTATACTaGTCAGGAGCAATCTCCTCT +
Preference number: 4 (lower is better)
Translates to: QEATGRYVSFEGWEVQDWTPSLY*SGAISS
Trigger: AGAGGAGATTGCTCCTGATCAGTATAGACTGGGTGT...CCAGTCTTGAACTTCCCAGCCCTCAAAACTAACATATCTTCCAGTAGCTTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354842.4
ENST00000442270.5
CDS-3UTR TCA 90 bp CACAGTGTTTGCTTTCTCGAACCACTTCTTGTACCAACTGTTGCAGGTTGGCTTACACCCAGTCTATACTaGTCAGGAGCAATCTCCTCT +
Preference number: 4 (lower is better)
Translates to: HSVCFLEPLLVPTVAGWLTPSLY*SGAISS
Trigger: AGAGGAGATTGCTCCTGATCAGTATAGACTGGGTGT...AAGCCAACCTGCAACAGTTGGTACAAGAAGTGGTTCGAGAAAGCAAACACTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000442270.5
ENST00000445416.5
ENST00000455331.5
CDS-3UTR TCA 90 bp GAAGAATCCATTCAGTTTCTGCTCATGAAGCATACTAAAAATATCTCAATCCAGGTGGGTGTAGGCCTGTaGGGGTGCTGGTCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: EESIQFLLMKHTKNISIQVGVGL*GCWSSA
Trigger: GGCTGAAGACCAGCACCCTCACAGGCCTACACCCAC...CTGGATTGAGATATTTTTAGTATGCTTCATGAGCAGAAACTGAATGGATTCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR TCA 90 bp GAGTTCGTGTCATTTCCTGTGGTTTTCTCCAGGGTATTAAATCCTGTATTCTGGACCATTGCCTTGGCCTaGGAGTTGGCTCTGTGTATG +
Preference number: 4 (lower is better)
Translates to: EFVSFPVVFSRVLNPVFWTIALA*ELALCM
Trigger: CATACACAGAGCCAACTCTCAGGCCAAGGCAATGGT...CCAGAATACAGGATTTAATACCCTGGAGAAAACCACAGGAAATGACACGAACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
CDS-3UTR TCA 90 bp GAAGTCCATGGAGATGGTGATGACAGAATCATTGTCAGCAAAGAAGGTAAATGTTCACTGCCTCTGTCATaGCCAGTGTTCCAGCCACCA +
Preference number: 4 (lower is better)
Translates to: EVHGDGDDRIIVSKEGKCSLPLS*PVFQPP
Trigger: TGGTGGCTGGAACACTGGTCATGACAGAGGCAGTGA...ACATTTACCTTCTTTGCTGACAATGATTCTGTCATCACCATCTCCATGGACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
CDS-3UTR TCA 90 bp CACCTCCCAACACTGTCACATTGGGAACCCATCCTCAACATGACTTTGGATGGGTTTTCAGCCAATATATaGGTTTCAGCTTTGGTCTGG +
Preference number: 4 (lower is better)
Translates to: HLPTLSHWEPILNMTLDGFSANI*VSALVW
Trigger: CCAGACCAAAGCTGAAACTCATATATTGGCTGAAAA...CCCATCCAAAGTCATGTTGAGGATGGGTTCCCAATGTGACAGTGTTGGGAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
CDS-3UTR TCA 90 bp TTCTTGTACCAACTGTTGCAGGTTGGCTTCCCAGGAAGCAGGCCCAGAGATAGAGCTTTTAACAAATCCTaGGTCTACTCCTCAGATTTC +
Preference number: 4 (lower is better)
Translates to: FLYQLLQVGFPGSRPRDRAFNKS*VYSSDF
Trigger: GAAATCTGAGGAGTAGACTCAGGATTTGTTAAAAGC...TCTATCTCTGGGCCTGCTTCCTGGGAAGCCAACCTGCAACAGTTGGTACAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR TCA 90 bp ATCTTACAGGGGAAAGGATTCCATATATTGAAGCAAGATGGAGTGCCAGCCCTTGTCTCTCTGAGTCTTTaGTCCCTTTTCCCGCCATCT +
Preference number: 4 (lower is better)
Translates to: ILQGKGFHILKQDGVPALVSLSL*SLFPPS
Trigger: AGATGGCGGGAAAAGGGATCAAAGACTCAGAGAGAC...AAGGGCTGGCACTCCATCTTGCTTCAATATATGGAATCCTTTCCCCTGTAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
CDS-3UTR TCA 90 bp CATCAATCCAGATGTCCCCCATTCCAAGTGTCAGAGTCCCATTCCTTCTTAACCTGTGGCAAAACCATCTaGAAGATCTCAGAAGTGTGC +
Preference number: 4 (lower is better)
Translates to: HQSRCPPFQVSESHSFLTCGKTI*KISEVC
Trigger: GCACACTTCTGAGATCTTTCAGATGGTTTTGCCACA...GGTTAAGAAGGAATGGGACTCTGACACTTGGAATGGGGGACATCTGGATTGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
CDS-3UTR TCA 90 bp GCTACTGGAAGATATGTTAGTTTTGAGGGCTGGGAAGTTCAAGACTGGGCAGTCTGTGGCAAAACCATCTaGAAGATCTCAGAAGTGTGC +
Preference number: 4 (lower is better)
Translates to: ATGRYVSFEGWEVQDWAVCGKTI*KISEVC
Trigger: GCACACTTCTGAGATCTTTCAGATGGTTTTGCCACA...GACTGCCCAGTCTTGAACTTCCCAGCCCTCAAAACTAACATATCTTCCAGTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354842.4
ENST00000442270.5
ENST00000452188.5
CDS-3UTR TCA 90 bp AAATGCCTCTTAAGGGTACCACCTCCCAACACTGTCACATTGGGAACCCATCCTTCAGAGTGGGAGCAGTaGAGAAATACATTGTCTTCT +
Preference number: 4 (lower is better)
Translates to: KCLLRVPPPNTVTLGTHPSEWEQ*RNTLSS
Trigger: AGAAGACAATGTATTTCTTCACTGCTCCCACTCTGA...AGGATGGGTTCCCAATGTGACAGTGTTGGGAGGTGGTACCCTTAAGAGGCATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000452188.5
CDS-3UTR TCA 90 bp CACAGTGTTTGCTTTCTCGAACCACTTCTTGTACCAACTGTTGCAGGTTGGCTTAAGAAGCTAAAATCTTaGAGGGATGCAGTCCCTGCC +
Preference number: 4 (lower is better)
Translates to: HSVCFLEPLLVPTVAGWLKKLKS*RDAVPA
Trigger: GGCAGGGACTGCATCCCTTCAAGATTTTAGCTTCTT...AAGCCAACCTGCAACAGTTGGTACAAGAAGTGGTTCGAGAAAGCAAACACTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000452188.5
CDS-3UTR TCA 90 bp CCCTTTCCCTGCCTGTCAGTTCAGTGGCACGAGAGGACAAAAATGGCCAGAATGCAATCCTGTATTTATTaGATTTCTGCACTTTCCCAC +
Preference number: 4 (lower is better)
Translates to: PFPCLSVQWHERTKMARMQSCIY*ISALSH
Trigger: GTGGGAAAGTGCAGAAATTCAATAAATACAGGATTG...CATTCTGGCCATTTTTGTCCTCTCGTGCCACTGAACTGACAGGCAGGGAAAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433011.5
CDS-3UTR TCA 90 bp GAAGAATCCATTCAGTTTCTGCTCATGAAGCATACTAAAAATATCTCAATCCAGGCCACAACCAGGGGCTaGCCACAGACCCTCTGGTCT +
Preference number: 4 (lower is better)
Translates to: EESIQFLLMKHTKNISIQATTRG*PQTLWS
Trigger: AGACCAGAGGGTCTGTGGTCAGCCCCTGGTTGTGGC...CTGGATTGAGATATTTTTAGTATGCTTCATGAGCAGAAACTGAATGGATTCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR TCA 90 bp GAAGAATCCATTCAGTTTCTGCTCATGAAGCATACTAAAAATATCTCAATCCAGCCTCACCCTGGAAACTaGCCACTGCCTCAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: EESIQFLLMKHTKNISIQPHPGN*PLPQAG
Trigger: CCCAGCCTGAGGCAGTGGTCAGTTTCCAGGGTGAGG...CTGGATTGAGATATTTTTAGTATGCTTCATGAGCAGAAACTGAATGGATTCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR TCA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGGAGCTGGCCAAAACCTaGGGCTGGGTAGAGCCCACT +
Preference number: 4 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKELAKT*GWVEPT
Trigger: AGTGGGCTCTACCCAGCCTCAGGTTTTGGCCAGCTC...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR TCA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGCTCTTCCCCAGCCCCTaGTCTGGATGCAGTAGTGGC +
Preference number: 4 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKLFPSP*SGCSSG
Trigger: GCCACTACTGCATCCAGATCAGGGGCTGGGGAAGAG...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR TCA 90 bp GAAGAATCCATTCAGTTTCTGCTCATGAAGCATACTAAAAATATCTCAATCCAGCATGGCTCCATCCCATaGCCCCATTCCTGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: EESIQFLLMKHTKNISIQHGSIP*PHSCPR
Trigger: CCTGGGGCAGGAATGGGGTCATGGGATGGAGCCATG...CTGGATTGAGATATTTTTAGTATGCTTCATGAGCAGAAACTGAATGGATTCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR TCA 90 bp TCCAAAATTTCATCACAGTGTTTGCTTTCTCGAACCACTTCTTGTACCAACTGTGTAGCCAGATGCGAGTaGCGACTGCAACGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: SKISSQCLLSRTTSCTNCVARCE*RLQRRL
Trigger: CAGCCTTCGTTGCAGTCGTCACTCGCATCTGGCTAC...ACAGTTGGTACAAGAAGTGGTTCGAGAAAGCAAACACTGTGATGAAATTTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445416.5
ENST00000452188.5
CDS-3UTR GCA 90 bp CATTCCATTGACCAAACCCAAGCAGAAGTCAATTACAAATGGAGTCTGGGGGATAGTGATCTTAAGCCCTaGAGCAGACATGCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: HSIDQTQAEVNYKWSLGDSDLKP*SRHAGR
Trigger: TCTGCCTGCATGTCTGCTGCAGGGCTTAAGATCACT...ATCCCCCAGACTCCATTTGTAATTGACTTCTGCTTGGGTTTGGTCAATGGAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000452188.5
CDS-3UTR GCA 90 bp CCATGGCACATAACTCGGCATAGAAGACTTGTCTTGGTTAGAATTTTAACTTTCCCAGATCACCAGTCCTaGAGTCACCCAGCCCACTTC +
Preference number: 4 (lower is better)
Translates to: PWHITRHRRLVLVRILTFPDHQS*SHPAHF
Trigger: GAAGTGGGCTGGGTGACTGCAGGACTGGTGATCTGG...GAAAGTTAAAATTCTAACCAAGACAAGTCTTCTATGCCGAGTTATGTGCCATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR GCA 90 bp AGCTACTGGAAGATATGTTCTGTTAGTTTTGAGGGCTGGGAAGTTCAAGACTGGCCTAGGCCCACTTCTTaGTCCAGTTTCTGCTCCAAT +
Preference number: 4 (lower is better)
Translates to: SYWKICSVSFEGWEVQDWPRPTS*SSFCSN
Trigger: ATTGGAGCAGAAACTGGAGCAAGAAGTGGGCCTAGG...CCAGTCTTGAACTTCCCAGCCCTCAAAACTAACAGAACATATCTTCCAGTAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433011.5
CDS-3UTR GCA 90 bp ATCTTACAGGGGAAAGGATTCCATATATTGAAGCAAGATGGAGTGCCAGCCCTTCTCAGTCAGAGTCACTaGCTCTGTCATGACCAGTGT +
Preference number: 4 (lower is better)
Translates to: ILQGKGFHILKQDGVPALLSQSH*LCHDQC
Trigger: ACACTGGTCATGACAGAGGCAGTGACTCTGACTGAG...AAGGGCTGGCACTCCATCTTGCTTCAATATATGGAATCCTTTCCCCTGTAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR GCA 90 bp GCTGTTACCCTAGGCCTAAGAGGGCAAGAGGAAGAAATAGTATTTCTGGAGCCTATCAGTTTGGGTCACTaGTTCTTTCATGGCCACTTC +
Preference number: 4 (lower is better)
Translates to: AVTLGLRGQEEEIVFLEPISLGH*FFHGHF
Trigger: GAAGTGGCCATGAAAGAAGCAGTGACCCAAACTGAT...AGGCTCCAGAAATACTATTTCTTCCTCTTGCCCTCTTAGGCCTAGGGTAACAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
CDS-3UTR GCA 90 bp TTTGCTTTCTCGAACCACTTCTTGTACCAACTGTTGCAGGTTGGCTTCCCAGGAATCAGTTTGGGTCACTaGTTCTTTCATGGCCACTTC +
Preference number: 4 (lower is better)
Translates to: FAFSNHFLYQLLQVGFPGISLGH*FFHGHF
Trigger: GAAGTGGCCATGAAAGAAGCAGTGACCCAAACTGAT...TCCTGGGAAGCCAACCTGCAACAGTTGGTACAAGAAGTGGTTCGAGAAAGCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR GCA 90 bp CTAAAATCTCAGTTGGAAATGCAGAAATCACCCGTCTTCTGCAACGATCACACTCACTTCCCTGGGTACTaGCAAGGTCTCACTCTGTGT +
Preference number: 4 (lower is better)
Translates to: LKSQLEMQKSPVFCNDHTHFPGY*QGLTLC
Trigger: ACACAGAGTGAGACCTTGGCAGTACCCAGGGAAGTG...AGTGTGATCGTTGCAGAAGACGGGTGATTTCTGCATTTCCAACTGAGATTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433011.5
CDS-3UTR GCA 90 bp ATTATGCGTGGCTTAACCCTAGTTATAGGCCCAGTGGCCAGGATAGGAGGTGCGTTTCATCACAGTGTTTaGTTTCTCGAACCACTTCTT +
Preference number: 4 (lower is better)
Translates to: IMRGLTLVIGPVARIGGAFHHSV*FLEPLL
Trigger: AAGAAGTGGTTCGAGAAAGCAAACACTGTGATGAAA...CGCACCTCCTATCCTGGCCACTGGGCCTATAACTAGGGTTAAGCCACGCATAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR GCA 90 bp GAAAACCCAGGTTATCTTACAGGGGAAAGGATTCCATATATTGAAGCAAGATGGGGCCAGGATAGGAGGTaGGGGCAGATTCTGAGGAAA +
Preference number: 4 (lower is better)
Translates to: ENPGYLTGERIPYIEARWGQDRR*GQILRK
Trigger: TTTCCTCAGAATCTGCCCGCACCTCCTATCCTGGCC...CCATCTTGCTTCAATATATGGAATCCTTTCCCCTGTAAGATAACCTGGGTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR GCA 90 bp TCCTGGACCATGAAGAAAGACAGGCTTATAGATTATCTGCTTTCTCTTCTTGCTGGCCAGGATAGGAGGTaGGGGCAGATTCTGAGGAAA +
Preference number: 4 (lower is better)
Translates to: SWTMKKDRLIDYLLSLLAGQDRR*GQILRK
Trigger: TTTCCTCAGAATCTGCCCGCACCTCCTATCCTGGCC...AGCAAGAAGAGAAAGCAGATAATCTATAAGCCTGTCTTTCTTCATGGTCCAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445416.5
CDS-3UTR GCA 90 bp CCTAGTTATAGGCCCAGTGGCCAGGATAGGAGGTGCGGGCAGATTCTGAGGAAAAAGATCTCAGAAGTGTaGTTTGCATATACACTTTCT +
Preference number: 4 (lower is better)
Translates to: PSYRPSGQDRRCGQILRKKISEV*FAYTLS
Trigger: AGAAAGTGTATATGCAAAGCACACTTCTGAGATCTT...TTTCCTCAGAATCTGCCCGCACCTCCTATCCTGGCCACTGGGCCTATAACTAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
CDS-3UTR GCA 90 bp CAAAGCAGTACTAGGAGGTGCCCCAGTGAGTATCCCTGGGCTCTGAGCATTGCTGTGAATCTTTGGATGTaGACTTCACTTACCATTAAA +
Preference number: 4 (lower is better)
Translates to: QSSTRRCPSEYPWALSIAVNLWM*TSLTIK
Trigger: TTTAATGGTAAGTGAAGTGCACATCCAAAGATTCAC...AGCAATGCTCAGAGCCCAGGGATACTCACTGGGGCACCTCCTAGTACTGCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433011.5
CDS-3UTR GCA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGCCAACACTAGCTGGATaGCCAGCCCCAGTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKPTLAG*PAPVQD
Trigger: GTCCTGGACTGGGGCTGGGCATCCAGCTAGTGTTGG...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR GCA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGTGGACTGATTCCCAGTaGCAGCCCAGGACCCACCAC +
Preference number: 4 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKWTDSQ*QPRTHH
Trigger: GTGGTGGGTCCTGGGCTGGCACTGGGAATCAGTCCA...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR GCA 90 bp ATTTCATCACAGTGTTTGCTTTCTCGAACCACTTCTTGTACCAACTGTTGCAGGGGTAAACAGCCCTACTaGAGGCCTATGGGAAGACAC +
Preference number: 4 (lower is better)
Translates to: ISSQCLLSRTTSCTNCCRGKQPY*RPMGRH
Trigger: GTGTCTTCCCATAGGCCTGCAGTAGGGCTGTTTACC...CCTGCAACAGTTGGTACAAGAAGTGGTTCGAGAAAGCAAACACTGTGATGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442270.5
ENST00000452188.5
CDS-3UTR GCA 90 bp AAAGGGGAAACAGGTACACGCAAAAGACACCAAGCACAAGAGGCAGACTCACTTAAGAGAGGAGCTGACTaGAAAAAGACAAAGGCTTGC +
Preference number: 4 (lower is better)
Translates to: KGETGTRKRHQAQEADSLKRGAD*KKTKAC
Trigger: GCAAGCCTTTGTCTTTTTGCAGTCAGCTCCTCTCTT...AAGTGAGTCTGCCTCTTGTGCTTGGTGTCTTTTGCGTGTACCTGTTTCCCCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000445416.5
CDS-3UTR CCA 90 bp AAACATAGCCCAAATCAGAGTGGGAGCAGTGAAGAAATACATTGTCTTCTCTCTAGAGCGCACTCGGGCTaGGGTAAAGAGAGTGGTAGT +
Preference number: 4 (lower is better)
Translates to: KHSPNQSGSSEEIHCLLSRAHSG*GKESGS
Trigger: ACTACCACTCTCTTTACCCCAGCCCGAGTGCGCTCT...AGAGAGAAGACAATGTATTTCTTCACTGCTCCCACTCTGATTTGGGCTATGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
CDS-3UTR CCA 90 bp GAAGTCCATGGAGATGGTGATGACAGAATCATTGTCAGCAAAGAAGGTAAATGTCCCCAACCATTGCCTTaGCCTGAGAGTTGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: EVHGDGDDRIIVSKEGKCPQPLP*PESWLC
Trigger: ACAGAGCCAACTCTCAGGCCAAGGCAATGGTTGGGG...ACATTTACCTTCTTTGCTGACAATGATTCTGTCATCACCATCTCCATGGACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
CDS-3UTR CCA 90 bp CACAGTGTTTGCTTTCTCGAACCACTTCTTGTACCAACTGTTGCAGGTTGGCTTGCCTCAGCATCAGTTTaGGTCACTGCTTCTTTCATG +
Preference number: 4 (lower is better)
Translates to: HSVCFLEPLLVPTVAGWLASASV*VTASFM
Trigger: CATGAAAGAAGCAGTGACCCAAACTGATGCTGAGGC...AAGCCAACCTGCAACAGTTGGTACAAGAAGTGGTTCGAGAAAGCAAACACTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CCA 90 bp TACCACCTCCCAACACTGTCACATTGGGAACCCATCCTCAACATGACTTTGGATGTTTCAGCTTTGGTCTaGGTCATTGCTTCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: YHLPTLSHWEPILNMTLDVSALV*VIASLL
Trigger: CAAGAGAGAAGCAATGACCCAGACCAAAGCTGAAAC...ATCCAAAGTCATGTTGAGGATGGGTTCCCAATGTGACAGTGTTGGGAGGTGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
CDS-3UTR CCA 90 bp TGTTCTGTTAGTTTTGAGGGCTGGGAAGTTCAAGACTGGGCAGTCACATCCGACTATGAGTTTCAGCTTTaGTCTGGGTCATTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: CSVSFEGWEVQDWAVTSDYEFQL*SGSLLL
Trigger: GAGAAGCAATGACCCAGACCAAAGCTGAAACTCATA...GTCGGATGTGACTGCCCAGTCTTGAACTTCCCAGCCCTCAAAACTAACAGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433011.5
CDS-3UTR CCA 90 bp TCATCTCCAAAATTTCATCACAGTGTTTGCTTTCTCGAACCACTTCTTGTACCACCAACTGTTGCAGGTTaGCTTCCCAGGAAGCAGGCC +
Preference number: 4 (lower is better)
Translates to: SSPKFHHSVCFLEPLLVPPTVAG*LPRKQA
Trigger: GGCCTGCTTCCTGGGAAGCCAACCTGCAACAGTTGG...TGGTACAAGAAGTGGTTCGAGAAAGCAAACACTGTGATGAAATTTTGGAGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CCA 90 bp TCCAAAATTTCATCACAGTGTTTGCTTTCTCGAACCACTTCTTGTACCAACTGTCCAACTGTTGCAGGTTaGCTTCCCAGGAAGCAGGCC +
Preference number: 4 (lower is better)
Translates to: SKISSQCLLSRTTSCTNCPTVAG*LPRKQA
Trigger: GGCCTGCTTCCTGGGAAGCCAACCTGCAACAGTTGG...ACAGTTGGTACAAGAAGTGGTTCGAGAAAGCAAACACTGTGATGAAATTTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CCA 90 bp AGCACAAGAACTCTCCCACTCCAAAGAGACTGCATTCATACCCTCATCAGGAGAGTCTTCATTGACAGCTaGGTAGCAGGTGATTCATCT +
Preference number: 4 (lower is better)
Translates to: STRTLPLQRDCIHTLIRRVFIDS*VAGDSS
Trigger: AGATGAATCACCTGCTACCCAGCTGTCAATGAAGAC...TCTCCTGATGAGGGTATGAATGCAGTCTCTTTGGAGTGGGAGAGTTCTTGTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
CDS-3UTR CCA 90 bp ATTATGCGTGGCTTAACCCTAGTTATAGGCCCAGTGGCCAGGATAGGAGGTGCGAGCCGCCCAATTTTCTaGCCTTCCTTATATTTAATA +
Preference number: 4 (lower is better)
Translates to: IMRGLTLVIGPVARIGGASRPIF*PSLYLI
Trigger: TATTAAATATAAGGAAGGCCAGAAAATTGGGCGGCT...CGCACCTCCTATCCTGGCCACTGGGCCTATAACTAGGGTTAAGCCACGCATAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
CDS-3UTR CCA 90 bp CACAGTGTTTGCTTTCTCGAACCACTTCTTGTACCAACTGTTGCAGGTTGGCTTTCCCGCCATCTTCTATaGCAACTCTGGCATTTACAC +
Preference number: 4 (lower is better)
Translates to: HSVCFLEPLLVPTVAGWLSRHLL*QLWHLH
Trigger: GTGTAAATGCCAGAGTTGCCATAGAAGATGGCGGGA...AAGCCAACCTGCAACAGTTGGTACAAGAAGTGGTTCGAGAAAGCAAACACTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
CDS-3UTR CCA 90 bp CACAGTGTTTGCTTTCTCGAACCACTTCTTGTACCAACTGTTGCAGGTTGGCTTAGTTCAAGGCCATCCTaGGCAATGTGGCAAAACCAT +
Preference number: 4 (lower is better)
Translates to: HSVCFLEPLLVPTVAGWLSSRPS*AMWQNH
Trigger: ATGGTTTTGCCACATTGCCCAGGATGGCCTTGAACT...AAGCCAACCTGCAACAGTTGGTACAAGAAGTGGTTCGAGAAAGCAAACACTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
CDS-3UTR CCA 90 bp CAGGGGAAAGGATTCCATATATTGAAGCAAGATGGAGTGCCAGCCCTTAATAGGAGTTCAAGGCCATCCTaGGCAATGTGGCAAAACCAT +
Preference number: 4 (lower is better)
Translates to: QGKGFHILKQDGVPALNRSSRPS*AMWQNH
Trigger: ATGGTTTTGCCACATTGCCCAGGATGGCCTTGAACT...CCTATTAAGGGCTGGCACTCCATCTTGCTTCAATATATGGAATCCTTTCCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
CDS-3UTR CCA 90 bp TCAGCTTTTTGTTATTCTTTTCCAGAGCTCAATCTGCTTAGCAACAGCCGCCCACTAACACCATGGGACTaGCTGATGCCCCTAAGGAAT +
Preference number: 4 (lower is better)
Translates to: SAFCYSFPELNLLSNSRPLTPWD*LMPLRN
Trigger: ATTCCTTAGGGGCATCAGCCAGTCCCATGGTGTTAG...TGGGCGGCTGTTGCTAAGCAGATTGAGCTCTGGAAAAGAATAACAAAAAGCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000452188.5
CDS-3UTR CCA 90 bp AAAGGGGAAACAGGTACACGCAAAAGACACCAAGCACAAGAGGCAGACTCACTTGAAGTCAATTACAAATaGAGTCTGGGGGATGCAGTC +
Preference number: 4 (lower is better)
Translates to: KGETGTRKRHQAQEADSLEVNYK*SLGDAV
Trigger: GACTGCATCCCCCAGACTCCATTTGTAATTGACTTC...AAGTGAGTCTGCCTCTTGTGCTTGGTGTCTTTTGCGTGTACCTGTTTCCCCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000452188.5
CDS-3UTR CCA 90 bp GCTGTTACCCTAGGCCTAAGAGGGCAAGAGGAAGAAATAGTATTTCTGGAGCCTACGAGAGGACAAAAATaGCCAGAATGTAGTCTCAGC +
Preference number: 4 (lower is better)
Translates to: AVTLGLRGQEEEIVFLEPTRGQK*PECSLS
Trigger: GCTGAGACTACATTCTGGCCATTTTTGTCCTCTCGT...AGGCTCCAGAAATACTATTTCTTCCTCTTGCCCTCTTAGGCCTAGGGTAACAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433011.5
CDS-3UTR CCA 90 bp GAAGAATCCATTCAGTTTCTGCTCATGAAGCATACTAAAAATATCTCAATCCAGGCCAGGACCCATCACTaGCCTGACCCGCAGCCCAAA +
Preference number: 4 (lower is better)
Translates to: EESIQFLLMKHTKNISIQARTHH*PDPQPK
Trigger: TTTGGGCTGCGGGTCAGGCCAGTGATGGGTCCTGGC...CTGGATTGAGATATTTTTAGTATGCTTCATGAGCAGAAACTGAATGGATTCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CCA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGGACCCTCCAACATCCTaGCCACTAGCCCCACCCCAA +
Preference number: 4 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKDPPTS*PLAPPQ
Trigger: TTGGGGTGGGGCTAGTGGCCAGGATGTTGGAGGGTC...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CCA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGCTGGTTCGTGGGCCCTaGCCTAGACCCTCCAACATC +
Preference number: 4 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKLVRGP*PRPSNI
Trigger: GATGTTGGAGGGTCTAGGCCAGGGCCCACGAACCAG...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423738.4
3UTR CAA 72 bp ACCATGGCCCACTCCTTTCACATTCAGCATCTATTCTaGTTATTCTATTCTCCCAACAGGGAGGCAGGGACA +
Preference number: 4 (lower is better)
Translates to: TMAHSFHIQHLF*LFYSPNREAGT
Trigger: TGTCCCTGCCTCCCTGTTGGGAGAATAGAATAACAAGAATAGATGCTGAATGTGAAAGGAGTGGGCCATGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433011.5
CDS-3UTR TCA 90 bp TTCATCACAGTGTTTGCTTTCTCGAACCACTTCTTGTACCAACTGTTGCAGGTTATGGGAAGACCTCCTTaGTCCAGTGCAGTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: FITVFAFSNHFLYQLLQVMGRPP*SSAVFS
Trigger: GGAGAAAACTGCACTGGATCAAGGAGGTCTTCCCAT...AACCTGCAACAGTTGGTACAAGAAGTGGTTCGAGAAAGCAAACACTGTGATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000445416.5
ENST00000455331.5
CDS-3UTR TCA 90 bp CATTCCATTGACCAAACCCAAGCAGAAGTCAATTACAAATGGAGTCTGGGGGATACACCCAGTCTATACTaGTCAGGAGCAATCTCCTCT +
Preference number: 4 (lower is better)
Translates to: HSIDQTQAEVNYKWSLGDTPSLY*SGAISS
Trigger: AGAGGAGATTGCTCCTGATCAGTATAGACTGGGTGT...ATCCCCCAGACTCCATTTGTAATTGACTTCTGCTTGGGTTTGGTCAATGGAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354842.4
ENST00000442270.5
CDS-3UTR TCA 90 bp AGGAAAACCCAGGTTATCTTACAGGGGAAAGGATTCCATATATTGAAGCAAGATTCACTGCCTCTGTCATaGCCAGTGTTCCAGCCACCA +
Preference number: 4 (lower is better)
Translates to: RKTQVILQGKGFHILKQDSLPLS*PVFQPP
Trigger: TGGTGGCTGGAACACTGGTCATGACAGAGGCAGTGA...ATCTTGCTTCAATATATGGAATCCTTTCCCCTGTAAGATAACCTGGGTTTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR TCA 90 bp CACCTCCCAACACTGTCACATTGGGAACCCATCCTCAACATGACTTTGGATGGGTATTTCTCAAAGGTCTaGTACATGGCACCAGTTAAT +
Preference number: 4 (lower is better)
Translates to: HLPTLSHWEPILNMTLDGYFSKV*YMAPVN
Trigger: ATTAACTGGTGCCATGTATCAGACCTTTGAGAAATA...CCCATCCAAAGTCATGTTGAGGATGGGTTCCCAATGTGACAGTGTTGGGAGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
CDS-3UTR TCA 90 bp GTTTGCTTTCTCGAACCACTTCTTGTACCAACTGTTGCAGGTTGGCTTCCCAGGGCTTTTAACAAATCCTaGGTCTACTCCTCAGATTTC +
Preference number: 4 (lower is better)
Translates to: VCFLEPLLVPTVAGWLPRAFNKS*VYSSDF
Trigger: GAAATCTGAGGAGTAGACTCAGGATTTGTTAAAAGC...CCTGGGAAGCCAACCTGCAACAGTTGGTACAAGAAGTGGTTCGAGAAAGCAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR TCA 90 bp AAAGGGGAAACAGGTACACGCAAAAGACACCAAGCACAAGAGGCAGACTCACTTATATTCCAGCCCTCCTaGTCAAGCTCCTTAGAATTT +
Preference number: 4 (lower is better)
Translates to: KGETGTRKRHQAQEADSLIFQPS*SSSLEF
Trigger: AAATTCTAAGGAGCTTGATCAGGAGGGCTGGAATAT...AAGTGAGTCTGCCTCTTGTGCTTGGTGTCTTTTGCGTGTACCTGTTTCCCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
CDS-3UTR TCA 90 bp GAGTTCGTGTCATTTCCTGTGGTTTTCTCCAGGGTATTAAATCCTGTATTCTGGGTCTCTCTGAGTCTTTaGTCCCTTTTCCCGCCATCT +
Preference number: 4 (lower is better)
Translates to: EFVSFPVVFSRVLNPVFWVSLSL*SLFPPS
Trigger: AGATGGCGGGAAAAGGGATCAAAGACTCAGAGAGAC...CCAGAATACAGGATTTAATACCCTGGAGAAAACCACAGGAAATGACACGAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
CDS-3UTR TCA 90 bp CATCAATCCAGATGTCCCCCATTCCAAGTGTCAGAGTCCCATTCCTTCTTAACCTCCTTTATGTCTCTCTaGGTCTTTGATCCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: HQSRCPPFQVSESHSFLTSFMSL*VFDPFS
Trigger: GGAAAAGGGATCAAAGACTCAGAGAGACATAAAGGA...GGTTAAGAAGGAATGGGACTCTGACACTTGGAATGGGGGACATCTGGATTGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
CDS-3UTR TCA 90 bp TCAGCTTTTTGTTATTCTTTTCCAGAGCTCAATCTGCTTAGCAACAGCCGCCCAAGGAGAGATTCCCCATaGCACAAATGCCTCTTAAGG +
Preference number: 4 (lower is better)
Translates to: SAFCYSFPELNLLSNSRPRRDSP*HKCLLR
Trigger: CCTTAAGAGGCATTTGTGTCATGGGGAATCTCTCCT...TGGGCGGCTGTTGCTAAGCAGATTGAGCTCTGGAAAAGAATAACAAAAAGCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
CDS-3UTR TCA 90 bp GTTATCTTACAGGGGAAAGGATTCCATATATTGAAGCAAGATGGAGTGCCAGCCAGGAGAGATTCCCCATaGCACAAATGCCTCTTAAGG +
Preference number: 4 (lower is better)
Translates to: VILQGKGFHILKQDGVPARRDSP*HKCLLR
Trigger: CCTTAAGAGGCATTTGTGTCATGGGGAATCTCTCCT...GGCTGGCACTCCATCTTGCTTCAATATATGGAATCCTTTCCCCTGTAAGATAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
CDS-3UTR TCA 90 bp TTATGTCTCTCTGAGTCTTTGATCCCTTTTCCCGCCATCTTCTATGGCAACTCTAAGAAGCTAAAATCTTaGAGGGATGCAGTCCCTGCC +
Preference number: 4 (lower is better)
Translates to: LCLSESLIPFPAIFYGNSKKLKS*RDAVPA
Trigger: GGCAGGGACTGCATCCCTTCAAGATTTTAGCTTCTT...AGAGTTGCCATAGAAGATGGCGGGAAAAGGGATCAAAGACTCAGAGAGACATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000452188.5
CDS-3UTR TCA 90 bp CATTCCATTGACCAAACCCAAGCAGAAGTCAATTACAAATGGAGTCTGGGGGATAAGAAGCTAAAATCTTaGAGGGATGCAGTCCCTGCC +
Preference number: 4 (lower is better)
Translates to: HSIDQTQAEVNYKWSLGDKKLKS*RDAVPA
Trigger: GGCAGGGACTGCATCCCTTCAAGATTTTAGCTTCTT...ATCCCCCAGACTCCATTTGTAATTGACTTCTGCTTGGGTTTGGTCAATGGAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000452188.5
CDS-3UTR TCA 90 bp GAAGAATCCATTCAGTTTCTGCTCATGAAGCATACTAAAAATATCTCAATCCAGGCAGGCTTGAGTGCCTaGCCCACCCTCACTCTCAGA +
Preference number: 4 (lower is better)
Translates to: EESIQFLLMKHTKNISIQAGLSA*PTLTLR
Trigger: TCTGAGAGTGAGGGTGGGTCAGGCACTCAAGCCTGC...CTGGATTGAGATATTTTTAGTATGCTTCATGAGCAGAAACTGAATGGATTCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR TCA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGAGCTCTCCAATGGCCTaGTTCCCAGCGAGAGCCCAA +
Preference number: 4 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKSSPMA*FPARAQ
Trigger: TTGGGCTCTCGCTGGGAATCAGGCCATTGGAGAGCT...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR TCA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGGACCCTCCATTCGTCTaGCTCCCAGGGCAAACACAG +
Preference number: 4 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKDPPFV*LPGQTQ
Trigger: CTGTGTTTGCCCTGGGAGTCAGACGAATGGAGGGTC...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR TCA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGGAACAGTCAACAGCCTaGTCCCCAGGCCCAATCCAG +
Preference number: 4 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKEQSTA*SPGPIQ
Trigger: CTGGATTGGGCCTGGGGATCAGGCTGTTGACTGTTC...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR GCA 90 bp GATTCTGAGGAAAACCCAGGTTATCTTACAGGGGAAAGGATTCCATATATTGAACCTCGCCGCAAACAGTaGTACACCGAACTACTGCTC +
Preference number: 4 (lower is better)
Translates to: DSEENPGYLTGERIPYIEPRRKQ*YTELLL
Trigger: GAGCAGTAGTTCGGTGTAGCACTGTTTGCGGCGAGG...TTCAATATATGGAATCCTTTCCCCTGTAAGATAACCTGGGTTTTCCTCAGAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
CDS-3UTR GCA 90 bp GATTCTGAGGAAAACCCAGGTTATCTTACAGGGGAAAGGATTCCATATATTGAAGCCCTGCAGCAGACATaGAGGCAGATCTCCATGCTT +
Preference number: 4 (lower is better)
Translates to: DSEENPGYLTGERIPYIEALQQT*RQISML
Trigger: AAGCATGGAGATCTGCCTGCATGTCTGCTGCAGGGC...TTCAATATATGGAATCCTTTCCCCTGTAAGATAACCTGGGTTTTCCTCAGAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR GCA 90 bp ATTTCATCACAGTGTTTGCTTTCTCGAACCACTTCTTGTACCAACTGTTGCAGGAGTGATCTTAAGCCCTaGAGCAGACATGCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: ISSQCLLSRTTSCTNCCRSDLKP*SRHAGR
Trigger: TCTGCCTGCATGTCTGCTGCAGGGCTTAAGATCACT...CCTGCAACAGTTGGTACAAGAAGTGGTTCGAGAAAGCAAACACTGTGATGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR GCA 90 bp AGGAAAACCCAGGTTATCTTACAGGGGAAAGGATTCCATATATTGAAGCAAGATTTGAGTCTCTGGCTCTaGCCCAACCATTGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: RKTQVILQGKGFHILKQDLSLWL*PNHCLG
Trigger: GCCAAGGCAATGGTTGGGGCAGAGCCAGAGACTCAA...ATCTTGCTTCAATATATGGAATCCTTTCCCCTGTAAGATAACCTGGGTTTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR GCA 90 bp AAATTCGAAGAGTTCAAATCAGGATTAATCCTCTCCCTCTCCCAAATCTTCTCCCACTTCCCTGGGTACTaGCAAGGTCTCACTCTGTGT +
Preference number: 4 (lower is better)
Translates to: KFEEFKSGLILSLSQIFSHFPGY*QGLTLC
Trigger: ACACAGAGTGAGACCTTGGCAGTACCCAGGGAAGTG...GGAGAAGATTTGGGAGAGGGAGAGGATTAATCCTGATTTGAACTCTTCGAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
CDS-3UTR GCA 90 bp GATTCTGAGGAAAACCCAGGTTATCTTACAGGGGAAAGGATTCCATATATTGAAGGCCAGGATAGGAGGTaGGGGCAGATTCTGAGGAAA +
Preference number: 4 (lower is better)
Translates to: DSEENPGYLTGERIPYIEGQDRR*GQILRK
Trigger: TTTCCTCAGAATCTGCCCGCACCTCCTATCCTGGCC...TTCAATATATGGAATCCTTTCCCCTGTAAGATAACCTGGGTTTTCCTCAGAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR GCA 90 bp CACCTCCCAACACTGTCACATTGGGAACCCATCCTCAACATGACTTTGGATGGGACTTACAGAGGTATATaGAAGATTATGAGACCCAAC +
Preference number: 4 (lower is better)
Translates to: HLPTLSHWEPILNMTLDGTYRGI*KIMRPN
Trigger: GTTGGGTCTCATAATCTTGCATATACCTCTGTAAGT...CCCATCCAAAGTCATGTTGAGGATGGGTTCCCAATGTGACAGTGTTGGGAGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000452188.5
CDS-3UTR GCA 90 bp CAGGTTATCTTACAGGGGAAAGGATTCCATATATTGAAGCAAGATGGAGTGCCACCTCGCCGCAAACAGTaGTACACCGAACTAATAAGC +
Preference number: 4 (lower is better)
Translates to: QVILQGKGFHILKQDGVPPRRKQ*YTELIS
Trigger: GCTTATTAGTTCGGTGTAGCACTGTTTGCGGCGAGG...TGGCACTCCATCTTGCTTCAATATATGGAATCCTTTCCCCTGTAAGATAACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433011.5
CDS-3UTR GCA 90 bp CCAGGTTATCTTACAGGGGAAAGGATTCCATATATTGAAGCAAGATGGAGTGCCAAATCACCCGTCTTCTaGAACGATCACACTGGAAGC +
Preference number: 4 (lower is better)
Translates to: PGYLTGERIPYIEARWSAKSPVF*NDHTGS
Trigger: GCTTCCAGTGTGATCGTTGCAGAAGACGGGTGATTT...GGCACTCCATCTTGCTTCAATATATGGAATCCTTTCCCCTGTAAGATAACCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433011.5
ENST00000442270.5
CDS-3UTR GCA 90 bp AAATGCCTCTTAAGGGTACCACCTCCCAACACTGTCACATTGGGAACCCATCCTAATCTCAGTTGGAAATaGAGAAATCACCCGTCTTCT +
Preference number: 4 (lower is better)
Translates to: KCLLRVPPPNTVTLGTHPNLSWK*RNHPSS
Trigger: AGAAGACGGGTGATTTCTGCATTTCCAACTGAGATT...AGGATGGGTTCCCAATGTGACAGTGTTGGGAGGTGGTACCCTTAAGAGGCATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433011.5
ENST00000442270.5
CDS-3UTR GCA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGAGAAGCCCTCGTGTCTaGCCCAGACTCTGCCCTAGA +
Preference number: 4 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKRSPRV*PRLCPR
Trigger: TCTAGGGCAGAGTCTGGGGCAGACACGAGGGCTTCT...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR GCA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGCTGGGCAGTGCCCATTaGACCTTCCCCAACTTCTGC +
Preference number: 4 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKLGSAH*TFPNFC
Trigger: GCAGAAGTTGGGGAAGGTGCAATGGGCACTGCCCAG...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR GCA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGCTGGACAGAGCCTGTTaGACCCATCCCAGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKLDRAC*THPSFC
Trigger: GCAGAAGCTGGGATGGGTGCAACAGGCTCTGTCCAG...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR GCA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGGCCTGCCCCAGTCCCTaGTTTAGGCACAGCAATGGT +
Preference number: 4 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKACPSP*FRHSNG
Trigger: ACCATTGCTGTGCCTAAAGCAGGGACTGGGGCAGGC...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CCA 90 bp TACTTCTTCAGTAGGTTAACTGGTGCAATAGTGAAAAGGGCCACTGCTTTCATGCACTACAGCTGCCTCTaGAGGTGGACCTGTAATGAT +
Preference number: 4 (lower is better)
Translates to: YFFSRLTGAIVKRATAFMHYSCL*RWTCND
Trigger: ATCATTACAGGTCCACCTCCAGAGGCAGCTGTAGTG...CATGAAAGCAGTGGCCCTTTTCACTATTGCACCAGTTAACCTACTGAAGAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433011.5
CDS-3UTR CCA 90 bp GATTCTGAGGAAAACCCAGGTTATCTTACAGGGGAAAGGATTCCATATATTGAAAGAGCGCACTCGGGCTaGGGTAAAGAGAGTGGTAGT +
Preference number: 4 (lower is better)
Translates to: DSEENPGYLTGERIPYIERAHSG*GKESGS
Trigger: ACTACCACTCTCTTTACCCCAGCCCGAGTGCGCTCT...TTCAATATATGGAATCCTTTCCCCTGTAAGATAACCTGGGTTTTCCTCAGAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CCA 90 bp TTATGTCTCTCTGAGTCTTTGATCCCTTTTCCCGCCATCTTCTATGGCAACTCTAGAGTCCTCACACTCTaGGCTCTTCCCTTGGTAAAT +
Preference number: 4 (lower is better)
Translates to: LCLSESLIPFPAIFYGNSRVLTL*ALPLVN
Trigger: ATTTACCAAGGGAAGAGCCCAGAGTGTGAGGACTCT...AGAGTTGCCATAGAAGATGGCGGGAAAAGGGATCAAAGACTCAGAGAGACATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
CDS-3UTR CCA 90 bp TTATGTCTCTCTGAGTCTTTGATCCCTTTTCCCGCCATCTTCTATGGCAACTCTTTCCAGCCACCACTTTaGACTCAGATTGAGTCTCTG +
Preference number: 4 (lower is better)
Translates to: LCLSESLIPFPAIFYGNSFQPPL*TQIESL
Trigger: CAGAGACTCAATCTGAGTCCAAAGTGGTGGCTGGAA...AGAGTTGCCATAGAAGATGGCGGGAAAAGGGATCAAAGACTCAGAGAGACATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
CDS-3UTR CCA 90 bp CAAATCCTGAGTCTACTCCTCAGATTTCTCCACCTTCTACCACCAATGATGGAGGTTTCAGCTTTGGTCTaGGTCATTGCTTCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: QILSLLLRFLHLLPPMMEVSALV*VIASLL
Trigger: CAAGAGAGAAGCAATGACCCAGACCAAAGCTGAAAC...CTCCATCATTGGTGGTAGAAGGTGGAGAAATCTGAGGAGTAGACTCAGGATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455331.5
CDS-3UTR CCA 90 bp TTGATCCCTTTTCCCGCCATCTTCTATGGCAACTCTGGCATTTACACCTCACTTACTAGGGAATGCTCTTaGGATCAACACAGTCTCTTC +
Preference number: 4 (lower is better)
Translates to: LIPFPAIFYGNSGIYTSLTRECS*DQHSLF
Trigger: GAAGAGACTGTGTTGATCCCAAGAGCATTCCCTAGT...AAGTGAGGTGTAAATGCCAGAGTTGCCATAGAAGATGGCGGGAAAAGGGATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
CDS-3UTR CCA 90 bp CACAGTGTTTGCTTTCTCGAACCACTTCTTGTACCAACTGTTGCAGGTTGGCTTACTAGGGAATGCTCTTaGGATCAACACAGTCTCTTC +
Preference number: 4 (lower is better)
Translates to: HSVCFLEPLLVPTVAGWLTRECS*DQHSLF
Trigger: GAAGAGACTGTGTTGATCCCAAGAGCATTCCCTAGT...AAGCCAACCTGCAACAGTTGGTACAAGAAGTGGTTCGAGAAAGCAAACACTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CCA 90 bp CACAGTGTTTGCTTTCTCGAACCACTTCTTGTACCAACTGTTGCAGGTTGGCTTGTCTTCATTGACAGCTaGGTAGCAGGTGATTCATCT +
Preference number: 4 (lower is better)
Translates to: HSVCFLEPLLVPTVAGWLVFIDS*VAGDSS
Trigger: AGATGAATCACCTGCTACCCAGCTGTCAATGAAGAC...AAGCCAACCTGCAACAGTTGGTACAAGAAGTGGTTCGAGAAAGCAAACACTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CCA 90 bp AAAGGGGAAACAGGTACACGCAAAAGACACCAAGCACAAGAGGCAGACTCACTTGATGCCCCTAAGGAATaGTGTCTTATAAAGGCTCAT +
Preference number: 4 (lower is better)
Translates to: KGETGTRKRHQAQEADSLDAPKE*CLIKAH
Trigger: ATGAGCCTTTATAAGACACCATTCCTTAGGGGCATC...AAGTGAGTCTGCCTCTTGTGCTTGGTGTCTTTTGCGTGTACCTGTTTCCCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000452188.5
CDS-3UTR CCA 90 bp TACTTCTTCAGTAGGTTAACTGGTGCAATAGTGAAAAGGGCCACTGCTTTCATGCTAACACCATGGGACTaGCTGATGCCCCTAAGGAAT +
Preference number: 4 (lower is better)
Translates to: YFFSRLTGAIVKRATAFMLTPWD*LMPLRN
Trigger: ATTCCTTAGGGGCATCAGCCAGTCCCATGGTGTTAG...CATGAAAGCAGTGGCCCTTTTCACTATTGCACCAGTTAACCTACTGAAGAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433011.5
CDS-3UTR CCA 90 bp TTGATCCCTTTTCCCGCCATCTTCTATGGCAACTCTGGCATTTACACCTCACTTGAAGTCAATTACAAATaGAGTCTGGGGGATGCAGTC +
Preference number: 4 (lower is better)
Translates to: LIPFPAIFYGNSGIYTSLEVNYK*SLGDAV
Trigger: GACTGCATCCCCCAGACTCCATTTGTAATTGACTTC...AAGTGAGGTGTAAATGCCAGAGTTGCCATAGAAGATGGCGGGAAAAGGGATCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000452188.5
CDS-3UTR CCA 90 bp GTTATCTTACAGGGGAAAGGATTCCATATATTGAAGCAAGATGGAGTGCCAGCCTGCCTGTCAGTTCAGTaGCACGAGAGGACAAAAATG +
Preference number: 4 (lower is better)
Translates to: VILQGKGFHILKQDGVPACLSVQ*HERTKM
Trigger: CATTTTTGTCCTCTCGTGCCACTGAACTGACAGGCA...GGCTGGCACTCCATCTTGCTTCAATATATGGAATCCTTTCCCCTGTAAGATAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433011.5
CDS-3UTR CCA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGCCCCCACCTTACACATaGCATTGGTGTTACCCCCGG +
Preference number: 4 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKPPPYT*HWCYPR
Trigger: CCGGGGGTAACACCAATGCCATGTGTAAGGTGGGGG...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CCA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGGACCCTCCACTGGCTTaGTCTGCAGTGTCAGCCCAA +
Preference number: 4 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKDPPLA*SAVSAQ
Trigger: TTGGGCTGACACTGCAGACCAAGCCAGTGGAGGGTC...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CCA 90 bp GAAGAATCCATTCAGTTTCTGCTCATGAAGCATACTAAAAATATCTCAATCCAGCAACAACCTGCTCCCTaGCATCAGCCCAGGACCCTC +
Preference number: 4 (lower is better)
Translates to: EESIQFLLMKHTKNISIQQQPAP*HQPRTL
Trigger: GAGGGTCCTGGGCTGATGCCAGGGAGCAGGTTGTTG...CTGGATTGAGATATTTTTAGTATGCTTCATGAGCAGAAACTGAATGGATTCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CCA 90 bp GAAGAATCCATTCAGTTTCTGCTCATGAAGCATACTAAAAATATCTCAATCCAGCTGATCCTCAGACCCTaGCCTGGAGCCTCCACCAGT +
Preference number: 4 (lower is better)
Translates to: EESIQFLLMKHTKNISIQLILRP*PGASTS
Trigger: ACTGGTGGAGGCTCCAGGCCAGGGTCTGAGGATCAG...CTGGATTGAGATATTTTTAGTATGCTTCATGAGCAGAAACTGAATGGATTCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CCA 90 bp GAAGAATCCATTCAGTTTCTGCTCATGAAGCATACTAAAAATATCTCAATCCAGGATTCTCCACTGGCTTaGCTCCCAGCACCAGCCCAG +
Preference number: 4 (lower is better)
Translates to: EESIQFLLMKHTKNISIQDSPLA*LPAPAQ
Trigger: CTGGGCTGGTGCTGGGAGCCAAGCCAGTGGAGAATC...CTGGATTGAGATATTTTTAGTATGCTTCATGAGCAGAAACTGAATGGATTCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CCA 90 bp GAAGAATCCATTCAGTTTCTGCTCATGAAGCATACTAAAAATATCTCAATCCAGCCCAGGATTCTCCACTaGCTTGGCTCCCAGCACCAG +
Preference number: 4 (lower is better)
Translates to: EESIQFLLMKHTKNISIQPRILH*LGSQHQ
Trigger: CTGGTGCTGGGAGCCAAGCCAGTGGAGAATCCTGGG...CTGGATTGAGATATTTTTAGTATGCTTCATGAGCAGAAACTGAATGGATTCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CCA 90 bp CAGGTTATCTTACAGGGGAAAGGATTCCATATATTGAAGCAAGATGGAGTGCCACCTACTGCAGGCCTATaGGAAGACACTAACCTCCTT +
Preference number: 4 (lower is better)
Translates to: QVILQGKGFHILKQDGVPPTAGL*EDTNLL
Trigger: AAGGAGGTTAGTGTCTTCCCATAGGCCTGCAGTAGG...TGGCACTCCATCTTGCTTCAATATATGGAATCCTTTCCCCTGTAAGATAACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442270.5
ENST00000452188.5
3UTR CAA 72 bp AATTTCATCACAGTGTTTGCTTTCTCGAACCACTTCTaGTACCAACTGTTGCAGGTTGGCTTCCCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: NFITVFAFSNHF*YQLLQVGFPGS
Trigger: GCTTCCTGGGAAGCCAACCTGCAACAGTTGGTACAAGAAGTGGTTCGAGAAAGCAAACACTGTGATGAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
ENST00000455331.5
3UTR CAA 72 bp ACCCAGGTTATCTTACAGGGGAAAGGATTCCATATATaGAAGCAAGATGGAGTGCCAGCCCTTAATAGGGAG +
Preference number: 4 (lower is better)
Translates to: TQVILQGKGFHI*KQDGVPALNRE
Trigger: CTCCCTATTAAGGGCTGGCACTCCATCTTGCTTCAATATATGGAATCCTTTCCCCTGTAAGATAACCTGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
ENST00000455331.5
3UTR CAA 72 bp CACTTTCTCAGGAAGCTACTGGAAGATATGTTAGTTTaGAGGGCTGGGAAGTTCAAGACTGGGCAGTCACAT +
Preference number: 4 (lower is better)
Translates to: HFLRKLLEDMLV*RAGKFKTGQSH
Trigger: ATGTGACTGCCCAGTCTTGAACTTCCCAGCCCTCAAAACTAACATATCTTCCAGTAGCTTCCTGAGAAAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354842.4
ENST00000442270.5
ENST00000452188.5
3UTR CAA 72 bp TCTCAGGAAGCTACTGGAAGATATGTTCTGTTAGTTTaGAGGGCTGGGAAGTTCAAGACTGGGCAGTCACAT +
Preference number: 4 (lower is better)
Translates to: SQEATGRYVLLV*RAGKFKTGQSH
Trigger: ATGTGACTGCCCAGTCTTGAACTTCCCAGCCCTCAAAACTAACAGAACATATCTTCCAGTAGCTTCCTGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433011.5
ENST00000445416.5
CDS-3UTR TCA 90 bp AGGAAAACCCAGGTTATCTTACAGGGGAAAGGATTCCATATATTGAAGCAAGATACCATTGCCTTGGCCTaGGAGTTGGCTCTGTGTATG +
Preference number: 4 (lower is better)
Translates to: RKTQVILQGKGFHILKQDTIALA*ELALCM
Trigger: CATACACAGAGCCAACTCTCAGGCCAAGGCAATGGT...ATCTTGCTTCAATATATGGAATCCTTTCCCCTGTAAGATAACCTGGGTTTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR TCA 90 bp TCATCTCCAAAATTTCATCACAGTGTTTGCTTTCTCGAACCACTTCTTGTACCAACTTTGGACTCAGATTaGGTCTCTGGCTCTGCCCCA +
Preference number: 4 (lower is better)
Translates to: SSPKFHHSVCFLEPLLVPTLDSD*VSGSAP
Trigger: TGGGGCAGAGCCAGAGACTCAATCTGAGTCCAAAGT...TGGTACAAGAAGTGGTTCGAGAAAGCAAACACTGTGATGAAATTTTGGAGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR TCA 90 bp AAATGCCTCTTAAGGGTACCACCTCCCAACACTGTCACATTGGGAACCCATCCTTATTTCTCAAAGGTCTaGTACATGGCACCAGTTAAT +
Preference number: 4 (lower is better)
Translates to: KCLLRVPPPNTVTLGTHPYFSKV*YMAPVN
Trigger: ATTAACTGGTGCCATGTATCAGACCTTTGAGAAATA...AGGATGGGTTCCCAATGTGACAGTGTTGGGAGGTGGTACCCTTAAGAGGCATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
CDS-3UTR TCA 90 bp CAGGAAGCTACTGGAAGATATGTTAGTTTTGAGGGCTGGGAAGTTCAAGACTGGATATTCCAGCCCTCCTaGTCAAGCTCCTTAGAATTT +
Preference number: 4 (lower is better)
Translates to: QEATGRYVSFEGWEVQDWIFQPS*SSSLEF
Trigger: AAATTCTAAGGAGCTTGATCAGGAGGGCTGGAATAT...CCAGTCTTGAACTTCCCAGCCCTCAAAACTAACATATCTTCCAGTAGCTTCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354842.4
ENST00000442270.5
ENST00000452188.5
CDS-3UTR TCA 90 bp CTAAAATCTCAGTTGGAAATGCAGAAATCACCCGTCTTCTGCAACGATCACACTAGGAGAGATTCCCCATaGCACAAATGCCTCTTAAGG +
Preference number: 4 (lower is better)
Translates to: LKSQLEMQKSPVFCNDHTRRDSP*HKCLLR
Trigger: CCTTAAGAGGCATTTGTGTCATGGGGAATCTCTCCT...AGTGTGATCGTTGCAGAAGACGGGTGATTTCTGCATTTCCAACTGAGATTTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433011.5
ENST00000442270.5
CDS-3UTR TCA 90 bp TTGATCCCTTTTCCCGCCATCTTCTATGGCAACTCTGGCATTTACACCTCACTTTCAGAGTGGGAGCAGTaGAGAAATACATTGTCTTCT +
Preference number: 4 (lower is better)
Translates to: LIPFPAIFYGNSGIYTSLSEWEQ*RNTLSS
Trigger: AGAAGACAATGTATTTCTTCACTGCTCCCACTCTGA...AAGTGAGGTGTAAATGCCAGAGTTGCCATAGAAGATGGCGGGAAAAGGGATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000452188.5
CDS-3UTR TCA 90 bp ATTTCATCACAGTGTTTGCTTTCTCGAACCACTTCTTGTACCAACTGTTGCAGGTGGACCAGTCTATACTaGTCAGGAGCAATCTCCTCT +
Preference number: 4 (lower is better)
Translates to: ISSQCLLSRTTSCTNCCRWTSLY*SGAISS
Trigger: AGAGGAGATTGCTCCTGATCAGTATAGACTGGTCCA...CCTGCAACAGTTGGTACAAGAAGTGGTTCGAGAAAGCAAACACTGTGATGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433011.5
ENST00000452188.5
CDS-3UTR TCA 90 bp ATCTTACAGGGGAAAGGATTCCATATATTGAAGCAAGATGGAGTGCCAGCCCTTGGCTTTATTCCCTGGTaGAAGCATTCATCCCTGATA +
Preference number: 4 (lower is better)
Translates to: ILQGKGFHILKQDGVPALGFIPW*KHSSLI
Trigger: TATCAGGGATGAATGCTTTCACCAGGGAATAAAGCC...AAGGGCTGGCACTCCATCTTGCTTCAATATATGGAATCCTTTCCCCTGTAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433011.5
CDS-3UTR TCA 90 bp GAAGAATCCATTCAGTTTCTGCTCATGAAGCATACTAAAAATATCTCAATCCAGGGCCTGGCCTCAGACTaGGTCTTAGCCACACTCACA +
Preference number: 4 (lower is better)
Translates to: EESIQFLLMKHTKNISIQGLASD*VLATLT
Trigger: TGTGAGTGTGGCTAAGACTCAGTCTGAGGCCAGGCC...CTGGATTGAGATATTTTTAGTATGCTTCATGAGCAGAAACTGAATGGATTCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR TCA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGACACTGGCCACAAGCTaGGGCTGTGTACAGGACAAC +
Preference number: 4 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKTLATS*GCVQDN
Trigger: GTTGTCCTGTACACAGCCTCAGCTTGTGGCCAGTGT...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR TCA 90 bp GAAGAATCCATTCAGTTTCTGCTCATGAAGCATACTAAAAATATCTCAATCCAGCCTATTCCACTGGACTaGTCCTCAGACCCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: EESIQFLLMKHTKNISIQPIPLD*SSDPGL
Trigger: CAGGCCAGGGTCTGAGGATCAGTCCAGTGGAATAGG...CTGGATTGAGATATTTTTAGTATGCTTCATGAGCAGAAACTGAATGGATTCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR TCA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGCCTCCACCTCAAAACTaGCCTGGAACCTTCCACTGG +
Preference number: 4 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKPPPQN*PGTFHW
Trigger: CCAGTGGAAGGTTCCAGGTCAGTTTTGAGGTGGAGG...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR GCA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGAAAGGCCACTACAGCTaGCTCTGGAGGTGGACCTGT +
Preference number: 4 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKKGHYS*LWRWTC
Trigger: ACAGGTCCACCTCCAGAGGCAGCTGTAGTGGCCTTT...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR GCA 90 bp GAAGAATCCATTCAGTTTCTGCTCATGAAGCATACTAAAAATATCTCAATCCAGCCAGATCACCAGTCCTaGAGTCACCCAGCCCACTTC +
Preference number: 4 (lower is better)
Translates to: EESIQFLLMKHTKNISIQPDHQS*SHPAHF
Trigger: GAAGTGGGCTGGGTGACTGCAGGACTGGTGATCTGG...CTGGATTGAGATATTTTTAGTATGCTTCATGAGCAGAAACTGAATGGATTCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR GCA 90 bp TTCTTGTACCAACTGTTGCAGGTTGGCTTCCCAGGAAGCAGGCCCAGAGATAGATTTAGTCTTAATCTCTaGTTCATTTATGGCCAAGGT +
Preference number: 4 (lower is better)
Translates to: FLYQLLQVGFPGSRPRDRFSLNL*FIYGQG
Trigger: ACCTTGGCCATAAATGAAGCAGAGATTAAGACTAAA...TCTATCTCTGGGCCTGCTTCCTGGGAAGCCAACCTGCAACAGTTGGTACAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR GCA 90 bp AAACATAGCCCAAATCAGAGTGGGAGCAGTGAAGAAATACATTGTCTTCTCTCTTCTTGCTCCAGTTTCTaGTCCAATCTCGACTTGGGG +
Preference number: 4 (lower is better)
Translates to: KHSPNQSGSSEEIHCLLSSCSSF*SNLDLG
Trigger: CCCCAAGTCGAGATTGGAGCAGAAACTGGAGCAAGA...AGAGAGAAGACAATGTATTTCTTCACTGCTCCCACTCTGATTTGGGCTATGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
CDS-3UTR GCA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGTTGAGTCTCTGGCTCTaGCCCAACCATTGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKLSLWL*PNHCLG
Trigger: GCCAAGGCAATGGTTGGGGCAGAGCCAGAGACTCAA...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR GCA 90 bp GAAGCTGATCATGAGGCCAAAGTCAATAATCAACTTCATTCTTCTACCACCCATCTCAGTCAGAGTCACTaGCTCTGTCATGACCAGTGT +
Preference number: 4 (lower is better)
Translates to: EADHEAKVNNQLHSSTTHLSQSH*LCHDQC
Trigger: ACACTGGTCATGACAGAGGCAGTGACTCTGACTGAG...ATGGGTGGTAGAAGAATGAAGTTGATTATTGACTTTGGCCTCATGATCAGCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433011.5
CDS-3UTR GCA 90 bp AGTGGCCAGGATAGGAGGTGCGGGCAGATTCTGAGGAAAACCCAGGTTATCTTACTTGGTCTGTGTCACTaGTTCTTTCTTAACTATTTT +
Preference number: 4 (lower is better)
Translates to: SGQDRRCGQILRKTQVILLGLCH*FFLNYF
Trigger: AAAATAGTTAAGAAAGAAGCAGTGACACAGACCAAG...TAAGATAACCTGGGTTTTCCTCAGAATCTGCCCGCACCTCCTATCCTGGCCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR GCA 90 bp CAGGTTATCTTACAGGGGAAAGGATTCCATATATTGAAGCAAGATGGAGTGCCATTTGGTCTGGGTCATTaGTTCTCTCTTGGCCTCTGT +
Preference number: 4 (lower is better)
Translates to: QVILQGKGFHILKQDGVPFGLGH*FSLGLC
Trigger: ACAGAGGCCAAGAGAGAAGCAATGACCCAGACCAAA...TGGCACTCCATCTTGCTTCAATATATGGAATCCTTTCCCCTGTAAGATAACCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR GCA 90 bp TTCTTGTACCAACTGTTGCAGGTTGGCTTCCCAGGAAGCAGGCCCAGAGATAGAAAGATCTCAGAAGTGTaGTTTGCATATACACTTTCT +
Preference number: 4 (lower is better)
Translates to: FLYQLLQVGFPGSRPRDRKISEV*FAYTLS
Trigger: AGAAAGTGTATATGCAAAGCACACTTCTGAGATCTT...TCTATCTCTGGGCCTGCTTCCTGGGAAGCCAACCTGCAACAGTTGGTACAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
CDS-3UTR GCA 90 bp CACAAATGCCTCTTAAGGGTACCACCTCCCAACACTGTCACATTGGGAACCCATACTTACAGAGGTATATaGAAGATTATGAGACCCAAC +
Preference number: 4 (lower is better)
Translates to: HKCLLRVPPPNTVTLGTHTYRGI*KIMRPN
Trigger: GTTGGGTCTCATAATCTTGCATATACCTCTGTAAGT...ATGGGTTCCCAATGTGACAGTGTTGGGAGGTGGTACCCTTAAGAGGCATTTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000452188.5
CDS-3UTR GCA 90 bp TTTGCTTTCTCGAACCACTTCTTGTACCAACTGTTGCAGGTTGGCTTCCCAGGAAATCTCAGTTGGAAATaGAGAAATCACCCGTCTTCT +
Preference number: 4 (lower is better)
Translates to: FAFSNHFLYQLLQVGFPGNLSWK*RNHPSS
Trigger: AGAAGACGGGTGATTTCTGCATTTCCAACTGAGATT...TCCTGGGAAGCCAACCTGCAACAGTTGGTACAAGAAGTGGTTCGAGAAAGCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433011.5
ENST00000442270.5
CDS-3UTR GCA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGTCTGAAGCTGGGCAGTaGCCATTGCACCTTCCCCAA +
Preference number: 4 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKSEAGQ*PLHLPQ
Trigger: TTGGGGAAGGTGCAATGGGCACTGCCCAGCTTCAGA...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR GCA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGCATAGACTTGTCCCTTaGCCCAGGCAAGGTCTCACC +
Preference number: 4 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKHRLVP*PRQGLT
Trigger: GGTGAGACCTTGCCTGGGGCAAGGGACAAGTCTATG...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CCA 90 bp AGGAAAACCCAGGTTATCTTACAGGGGAAAGGATTCCATATATTGAAGCAAGATCCTACTGCAGGCCTATaGGAAGACCTCCTTGATCCA +
Preference number: 4 (lower is better)
Translates to: RKTQVILQGKGFHILKQDPTAGL*EDLLDP
Trigger: TGGATCAAGGAGGTCTTCCCATAGGCCTGCAGTAGG...ATCTTGCTTCAATATATGGAATCCTTTCCCCTGTAAGATAACCTGGGTTTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000445416.5
ENST00000455331.5
CDS-3UTR CCA 90 bp GAAAACCCAGGTTATCTTACAGGGGAAAGGATTCCATATATTGAAGCAAGATGGCACTACAGCTGCCTCTaGAGGTGGACCTGTAATGAT +
Preference number: 4 (lower is better)
Translates to: ENPGYLTGERIPYIEARWHYSCL*RWTCND
Trigger: ATCATTACAGGTCCACCTCCAGAGGCAGCTGTAGTG...CCATCTTGCTTCAATATATGGAATCCTTTCCCCTGTAAGATAACCTGGGTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CCA 90 bp ATGATGATTAAGGCATTCTGGAAGTCCATGGAGATGGTGATGACAGAATCATTGCACTACAGCTGCCTCTaGAGGTGGACCTGTAATGAT +
Preference number: 4 (lower is better)
Translates to: MMIKAFWKSMEMVMTESLHYSCL*RWTCND
Trigger: ATCATTACAGGTCCACCTCCAGAGGCAGCTGTAGTG...CAATGATTCTGTCATCACCATCTCCATGGACTTCCAGAATGCCTTAATCATCAT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
CDS-3UTR CCA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGAGAGCGCACTCGGGCTaGGGTAAAGAGAGTGGTAGT +
Preference number: 4 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKRAHSG*GKESGS
Trigger: ACTACCACTCTCTTTACCCCAGCCCGAGTGCGCTCT...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CCA 90 bp GAAAACCCAGGTTATCTTACAGGGGAAAGGATTCCATATATTGAAGCAAGATGGTTTATGGCCAAGGTCTaGCTCTGTACCCCAACCACA +
Preference number: 4 (lower is better)
Translates to: ENPGYLTGERIPYIEARWFMAKV*LCTPTT
Trigger: TGTGGTTGGGGTACAGAGCCAGACCTTGGCCATAAA...CCATCTTGCTTCAATATATGGAATCCTTTCCCCTGTAAGATAACCTGGGTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CCA 90 bp TTATGTCTCTCTGAGTCTTTGATCCCTTTTCCCGCCATCTTCTATGGCAACTCTTCTCTGCTTCATTTATaGCCAAGGTCTGGCTCTGTA +
Preference number: 4 (lower is better)
Translates to: LCLSESLIPFPAIFYGNSSLLHL*PRSGSV
Trigger: TACAGAGCCAGACCTTGGCCATAAATGAAGCAGAGA...AGAGTTGCCATAGAAGATGGCGGGAAAAGGGATCAAAGACTCAGAGAGACATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
CDS-3UTR CCA 90 bp CAGGGGAAAGGATTCCATATATTGAAGCAAGATGGAGTGCCAGCCCTTAATAGGGCTCCAATCTCGACTTaGGGTTTAGTCTTAATCTCT +
Preference number: 4 (lower is better)
Translates to: QGKGFHILKQDGVPALNRAPIST*GLVLIS
Trigger: AGAGATTAAGACTAAACCCCAAGTCGAGATTGGAGC...CCTATTAAGGGCTGGCACTCCATCTTGCTTCAATATATGGAATCCTTTCCCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CCA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGCCCCAACCATTGCCTTaGCCTGAGAGTTGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKPQPLP*PESWLC
Trigger: ACAGAGCCAACTCTCAGGCCAAGGCAATGGTTGGGG...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CCA 90 bp TTCATCACAGTGTTTGCTTTCTCGAACCACTTCTTGTACCAACTGTTGCAGGTTTTCCAGCCACCACTTTaGACTCAGATTGAGTCTCTG +
Preference number: 4 (lower is better)
Translates to: FITVFAFSNHFLYQLLQVFQPPL*TQIESL
Trigger: CAGAGACTCAATCTGAGTCCAAAGTGGTGGCTGGAA...AACCTGCAACAGTTGGTACAAGAAGTGGTTCGAGAAAGCAAACACTGTGATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CCA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGTCTTGGCCTCTGTCTTaGCAACCAGCGCCCAAGCTT +
Preference number: 4 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKSWPLS*QPAPKL
Trigger: AAGCTTGGGCGCTGGTTGCCAAGACAGAGGCCAAGA...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CCA 90 bp TCCAAAATTTCATCACAGTGTTTGCTTTCTCGAACCACTTCTTGTACCAACTGTTTCCAGTCTTGTTCGTaGCCCCCATCTTGGCCACTT +
Preference number: 4 (lower is better)
Translates to: SKISSQCLLSRTTSCTNCFQSCS*PPSWPL
Trigger: AAGTGGCCAAGATGGGGGCCACGAACAAGACTGGAA...ACAGTTGGTACAAGAAGTGGTTCGAGAAAGCAAACACTGTGATGAAATTTTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CCA 90 bp ATCTTACAGGGGAAAGGATTCCATATATTGAAGCAAGATGGAGTGCCAGCCCTTCCAGAGCTCTTGTCTTaGTTTCATCCACAATTCCAG +
Preference number: 4 (lower is better)
Translates to: ILQGKGFHILKQDGVPALPELLS*FHPQFQ
Trigger: CTGGAATTGTGGATGAAACCAAGACAAGAGCTCTGG...AAGGGCTGGCACTCCATCTTGCTTCAATATATGGAATCCTTTCCCCTGTAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CCA 90 bp GTTATCTTACAGGGGAAAGGATTCCATATATTGAAGCAAGATGGAGTGCCAGCCACTAGGGAATGCTCTTaGGATCAACACAGTCTCTTC +
Preference number: 4 (lower is better)
Translates to: VILQGKGFHILKQDGVPATRECS*DQHSLF
Trigger: GAAGAGACTGTGTTGATCCCAAGAGCATTCCCTAGT...GGCTGGCACTCCATCTTGCTTCAATATATGGAATCCTTTCCCCTGTAAGATAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CCA 90 bp ATCTTACAGGGGAAAGGATTCCATATATTGAAGCAAGATGGAGTGCCAGCCCTTGTCTTCATTGACAGCTaGGTAGCAGGTGATTCATCT +
Preference number: 4 (lower is better)
Translates to: ILQGKGFHILKQDGVPALVFIDS*VAGDSS
Trigger: AGATGAATCACCTGCTACCCAGCTGTCAATGAAGAC...AAGGGCTGGCACTCCATCTTGCTTCAATATATGGAATCCTTTCCCCTGTAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CCA 90 bp ATTTCATCACAGTGTTTGCTTTCTCGAACCACTTCTTGTACCAACTGTTGCAGGTCCCGCCATCTTCTATaGCAACTCTGGCATTTACAC +
Preference number: 4 (lower is better)
Translates to: ISSQCLLSRTTSCTNCCRSRHLL*QLWHLH
Trigger: GTGTAAATGCCAGAGTTGCCATAGAAGATGGCGGGA...CCTGCAACAGTTGGTACAAGAAGTGGTTCGAGAAAGCAAACACTGTGATGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
CDS-3UTR CCA 90 bp CACAGTGTTTGCTTTCTCGAACCACTTCTTGTACCAACTGTTGCAGGTTGGCTTGATGCCCCTAAGGAATaGTGTCTTATAAAGGCTCAT +
Preference number: 4 (lower is better)
Translates to: HSVCFLEPLLVPTVAGWLDAPKE*CLIKAH
Trigger: ATGAGCCTTTATAAGACACCATTCCTTAGGGGCATC...AAGCCAACCTGCAACAGTTGGTACAAGAAGTGGTTCGAGAAAGCAAACACTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000452188.5
CDS-3UTR CCA 90 bp CAGGGGAAAGGATTCCATATATTGAAGCAAGATGGAGTGCCAGCCCTTAATAGGCAACAAGCAATTTTGTaGCACCCAGAGGTTAGCAAT +
Preference number: 4 (lower is better)
Translates to: QGKGFHILKQDGVPALNRQQAIL*HPEVSN
Trigger: ATTGCTAACCTCTGGGTGCCACAAAATTGCTTGTTG...CCTATTAAGGGCTGGCACTCCATCTTGCTTCAATATATGGAATCCTTTCCCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000452188.5
CDS-3UTR CCA 90 bp AGTGGCCAGGATAGGAGGTGCGGGCAGATTCTGAGGAAAACCCAGGTTATCTTACCTATTTGGCCATCTTaGAATGATCAGTCTAAAATT +
Preference number: 4 (lower is better)
Translates to: SGQDRRCGQILRKTQVILPIWPS*NDQSKI
Trigger: AATTTTAGACTGATCATTCCAAGATGGCCAAATAGG...TAAGATAACCTGGGTTTTCCTCAGAATCTGCCCGCACCTCCTATCCTGGCCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433011.5
ENST00000442270.5
CDS-3UTR CCA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGCTCCAGCCACCTCCCTaGACATGCCATTGGGATTTC +
Preference number: 4 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKLQPPP*TCHWDF
Trigger: GAAATCCCAATGGCATGTCCAGGGAGGTGGCTGGAG...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CCA 90 bp GAAGAATCCATTCAGTTTCTGCTCATGAAGCATACTAAAAATATCTCAATCCAGCCCTACCATCAACCCTaGCACCAGACGTCACCTCAG +
Preference number: 4 (lower is better)
Translates to: EESIQFLLMKHTKNISIQPYHQP*HQTSPQ
Trigger: CTGAGGTGACGTCTGGTGCCAGGGTTGATGGTAGGG...CTGGATTGAGATATTTTTAGTATGCTTCATGAGCAGAAACTGAATGGATTCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CCA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGCCTCAGCGTGAGTACTaGCAACAGCTTGAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKPQREY*QQLEAE
Trigger: CTCAGCCTCAAGCTGTTGCCAGTACTCACGCTGAGG...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CCA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGACCACTGCCTCAGGCTaGGCAGAGTCTGTTGTACCT +
Preference number: 4 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKTTASG*AESVVP
Trigger: AGGTACAACAGACTCTGCCCAGCCTGAGGCAGTGGT...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CCA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGGCCACAACCTGGACCTaGACAGAGCCCATTATGCCT +
Preference number: 4 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKATTWT*TEPIMP
Trigger: AGGCATAATGGGCTCTGTCCAGGTCCAGGTTGTGGC...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CCA 90 bp GAAGAATCCATTCAGTTTCTGCTCATGAAGCATACTAAAAATATCTCAATCCAGCCTCACTCTCAGAAGTaGGCATGGCCTCAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: EESIQFLLMKHTKNISIQPHSQK*AWPQPQ
Trigger: CTGAGGCTGAGGCCATGCCCACTTCTGAGAGTGAGG...CTGGATTGAGATATTTTTAGTATGCTTCATGAGCAGAAACTGAATGGATTCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CCA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGCCCAAAGCTCTCCAATaGCCTGATTCCCAGCGAGAG +
Preference number: 4 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKPKALQ*PDSQRE
Trigger: CTCTCGCTGGGAATCAGGCCATTGGAGAGCTTTGGG...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CCA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGGATCCTCCAGTGGCCTaGTCCTCAGATCCCATCCTA +
Preference number: 4 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKDPPVA*SSDPIL
Trigger: TAGGATGGGATCTGAGGACCAGGCCACTGGAGGATC...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423738.4
3UTR CAA 72 bp AGTTCAAGACTGGGCAGTCACATCCGACAACTTCTTTaGAGGGCATCAAAACATGGCAAAGAAACAAAAGGG +
Preference number: 4 (lower is better)
Translates to: SSRLGSHIRQLL*RASKHGKETKG
Trigger: CCCTTTTGTTTCTTTGCCATGTTTTGATGCCCTCAAAAGAAGTTGTCGGATGTGACTGCCCAGTCTTGAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
CDS-3UTR TCA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGACCATTGCCTTGGCCTaGGAGTTGGCTCTGTGTATG +
Preference number: 4 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKTIALA*ELALCM
Trigger: CATACACAGAGCCAACTCTCAGGCCAAGGCAATGGT...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR TCA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGACTTTGGACTCAGATTaGGTCTCTGGCTCTGCCCCA +
Preference number: 4 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKTLDSD*VSGSAP
Trigger: TGGGGCAGAGCCAGAGACTCAATCTGAGTCCAAAGT...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR TCA 90 bp GAAGAATCCATTCAGTTTCTGCTCATGAAGCATACTAAAAATATCTCAATCCAGTCACTGCCTCTGTCATaGCCAGTGTTCCAGCCACCA +
Preference number: 4 (lower is better)
Translates to: EESIQFLLMKHTKNISIQSLPLS*PVFQPP
Trigger: TGGTGGCTGGAACACTGGTCATGACAGAGGCAGTGA...CTGGATTGAGATATTTTTAGTATGCTTCATGAGCAGAAACTGAATGGATTCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR TCA 90 bp TCAGCTTTTTGTTATTCTTTTCCAGAGCTCAATCTGCTTAGCAACAGCCGCCCAAAGGATTCCATATATTaGAGCAAGATGGAGTGCCAG +
Preference number: 4 (lower is better)
Translates to: SAFCYSFPELNLLSNSRPKDSIY*SKMECQ
Trigger: CTGGCACTCCATCTTGCTTCAATATATGGAATCCTT...TGGGCGGCTGTTGCTAAGCAGATTGAGCTCTGGAAAAGAATAACAAAAAGCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
CDS-3UTR TCA 90 bp GTTATCTTACAGGGGAAAGGATTCCATATATTGAAGCAAGATGGAGTGCCAGCCAAGGATTCCATATATTaGAGCAAGATGGAGTGCCAG +
Preference number: 4 (lower is better)
Translates to: VILQGKGFHILKQDGVPAKDSIY*SKMECQ
Trigger: CTGGCACTCCATCTTGCTTCAATATATGGAATCCTT...GGCTGGCACTCCATCTTGCTTCAATATATGGAATCCTTTCCCCTGTAAGATAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR TCA 90 bp TTATGTCTCTCTGAGTCTTTGATCCCTTTTCCCGCCATCTTCTATGGCAACTCTATATTCCAGCCCTCCTaGTCAAGCTCCTTAGAATTT +
Preference number: 4 (lower is better)
Translates to: LCLSESLIPFPAIFYGNSIFQPS*SSSLEF
Trigger: AAATTCTAAGGAGCTTGATCAGGAGGGCTGGAATAT...AGAGTTGCCATAGAAGATGGCGGGAAAAGGGATCAAAGACTCAGAGAGACATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
CDS-3UTR TCA 90 bp AGGAAAACCCAGGTTATCTTACAGGGGAAAGGATTCCATATATTGAAGCAAGATGTCTCTCTGAGTCTTTaGTCCCTTTTCCCGCCATCT +
Preference number: 4 (lower is better)
Translates to: RKTQVILQGKGFHILKQDVSLSL*SLFPPS
Trigger: AGATGGCGGGAAAAGGGATCAAAGACTCAGAGAGAC...ATCTTGCTTCAATATATGGAATCCTTTCCCCTGTAAGATAACCTGGGTTTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
CDS-3UTR TCA 90 bp AGCTACTGGAAGATATGTTCTGTTAGTTTTGAGGGCTGGGAAGTTCAAGACTGGTCCTTTATGTCTCTCTaGGTCTTTGATCCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: SYWKICSVSFEGWEVQDWSFMSL*VFDPFS
Trigger: GGAAAAGGGATCAAAGACTCAGAGAGACATAAAGGA...CCAGTCTTGAACTTCCCAGCCCTCAAAACTAACAGAACATATCTTCCAGTAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433011.5
ENST00000445416.5
CDS-3UTR TCA 90 bp TTCATCACAGTGTTTGCTTTCTCGAACCACTTCTTGTACCAACTGTTGCAGGTTAACCCATCCTCAACATaGCTTTGGATGGGGATAAAC +
Preference number: 4 (lower is better)
Translates to: FITVFAFSNHFLYQLLQVNPSST*LWMGIN
Trigger: GTTTATCCCCATCCAAAGTCATGTTGAGGATGGGTT...AACCTGCAACAGTTGGTACAAGAAGTGGTTCGAGAAAGCAAACACTGTGATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
CDS-3UTR TCA 90 bp GAGTTCGTGTCATTTCCTGTGGTTTTCTCCAGGGTATTAAATCCTGTATTCTGGAACCCATCCTCAACATaGCTTTGGATGGGGATAAAC +
Preference number: 4 (lower is better)
Translates to: EFVSFPVVFSRVLNPVFWNPSST*LWMGIN
Trigger: GTTTATCCCCATCCAAAGTCATGTTGAGGATGGGTT...CCAGAATACAGGATTTAATACCCTGGAGAAAACCACAGGAAATGACACGAACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
CDS-3UTR TCA 90 bp CAGGTTATCTTACAGGGGAAAGGATTCCATATATTGAAGCAAGATGGAGTGCCATGCAGTCCCATTAAATaGGTTCCTTGGTCAGAGACA +
Preference number: 4 (lower is better)
Translates to: QVILQGKGFHILKQDGVPCSPIK*VPWSET
Trigger: TGTCTCTGACCAAGGAACTCATTTAATGGGACTGCA...TGGCACTCCATCTTGCTTCAATATATGGAATCCTTTCCCCTGTAAGATAACCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354842.4
ENST00000442270.5
ENST00000452188.5
CDS-3UTR TCA 90 bp TTATGTCTCTCTGAGTCTTTGATCCCTTTTCCCGCCATCTTCTATGGCAACTCTAAGCTTCCACAAATTTaGAGATGGTGCTATCAGCAG +
Preference number: 4 (lower is better)
Translates to: LCLSESLIPFPAIFYGNSKLPQI*RWCYQQ
Trigger: CTGCTGATAGCACCATCTTCAAATTTGTGGAAGCTT...AGAGTTGCCATAGAAGATGGCGGGAAAAGGGATCAAAGACTCAGAGAGACATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433011.5
CDS-3UTR TCA 90 bp AAATTCGAAGAGTTCAAATCAGGATTAATCCTCTCCCTCTCCCAAATCTTCTCCTGGACCAGTCTATACTaGTCAGGAGCAATCTCCTCT +
Preference number: 4 (lower is better)
Translates to: KFEEFKSGLILSLSQIFSWTSLY*SGAISS
Trigger: AGAGGAGATTGCTCCTGATCAGTATAGACTGGTCCA...GGAGAAGATTTGGGAGAGGGAGAGGATTAATCCTGATTTGAACTCTTCGAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433011.5
ENST00000452188.5
CDS-3UTR TCA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGATCTTGGTCACAGCCTaGGACTGTGCACAGGACTTC +
Preference number: 4 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKILVTA*DCAQDF
Trigger: GAAGTCCTGTGCACAGTCTCAGGCTGTGACCAAGAT...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR TCA 90 bp GAAGAATCCATTCAGTTTCTGCTCATGAAGCATACTAAAAATATCTCAATCCAGCTCTGGGCCATACCTTaGGCCTTCATATCCACCCCA +
Preference number: 4 (lower is better)
Translates to: EESIQFLLMKHTKNISIQLWAIP*AFISTP
Trigger: TGGGGTGGATATGAAGGCTCAAGGTATGGCCCAGAG...CTGGATTGAGATATTTTTAGTATGCTTCATGAGCAGAAACTGAATGGATTCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR GCA 90 bp GAAGAATCCATTCAGTTTCTGCTCATGAAGCATACTAAAAATATCTCAATCCAGAGCCCACTTCCTGAATaGGGCCCATGTAATCACCCC +
Preference number: 4 (lower is better)
Translates to: EESIQFLLMKHTKNISIQSPLPE*GPCNHP
Trigger: GGGGTGATTACATGGGCCGCATTCAGGAAGTGGGCT...CTGGATTGAGATATTTTTAGTATGCTTCATGAGCAGAAACTGAATGGATTCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR GCA 90 bp GATTCTGAGGAAAACCCAGGTTATCTTACAGGGGAAAGGATTCCATATATTGAATCTTGCTCCAGTTTCTaGTCCAATCTCGACTTGGGG +
Preference number: 4 (lower is better)
Translates to: DSEENPGYLTGERIPYIESCSSF*SNLDLG
Trigger: CCCCAAGTCGAGATTGGAGCAGAAACTGGAGCAAGA...TTCAATATATGGAATCCTTTCCCCTGTAAGATAACCTGGGTTTTCCTCAGAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR GCA 90 bp TCCAAAATTTCATCACAGTGTTTGCTTTCTCGAACCACTTCTTGTACCAACTGTTCTTGCTCCAGTTTCTaGTCCAATCTCGACTTGGGG +
Preference number: 4 (lower is better)
Translates to: SKISSQCLLSRTTSCTNCSCSSF*SNLDLG
Trigger: CCCCAAGTCGAGATTGGAGCAGAAACTGGAGCAAGA...ACAGTTGGTACAAGAAGTGGTTCGAGAAAGCAAACACTGTGATGAAATTTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR GCA 90 bp AGGAAAACCCAGGTTATCTTACAGGGGAAAGGATTCCATATATTGAAGCAAGATCTCAGTCAGAGTCACTaGCTCTGTCATGACCAGTGT +
Preference number: 4 (lower is better)
Translates to: RKTQVILQGKGFHILKQDLSQSH*LCHDQC
Trigger: ACACTGGTCATGACAGAGGCAGTGACTCTGACTGAG...ATCTTGCTTCAATATATGGAATCCTTTCCCCTGTAAGATAACCTGGGTTTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR GCA 90 bp CACAAATGCCTCTTAAGGGTACCACCTCCCAACACTGTCACATTGGGAACCCATCTTGGTCTGTGTCACTaGTTCTTTCTTAACTATTTT +
Preference number: 4 (lower is better)
Translates to: HKCLLRVPPPNTVTLGTHLGLCH*FFLNYF
Trigger: AAAATAGTTAAGAAAGAAGCAGTGACACAGACCAAG...ATGGGTTCCCAATGTGACAGTGTTGGGAGGTGGTACCCTTAAGAGGCATTTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
CDS-3UTR GCA 90 bp GAAAACCCAGGTTATCTTACAGGGGAAAGGATTCCATATATTGAAGCAAGATGGTTTGGTCTGGGTCATTaGTTCTCTCTTGGCCTCTGT +
Preference number: 4 (lower is better)
Translates to: ENPGYLTGERIPYIEARWFGLGH*FSLGLC
Trigger: ACAGAGGCCAAGAGAGAAGCAATGACCCAGACCAAA...CCATCTTGCTTCAATATATGGAATCCTTTCCCCTGTAAGATAACCTGGGTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR GCA 90 bp CATCAATCCAGATGTCCCCCATTCCAAGTGTCAGAGTCCCATTCCTTCTTAACCTTTCATCACAGTGTTTaGTTTCTCGAACCACTTCTT +
Preference number: 4 (lower is better)
Translates to: HQSRCPPFQVSESHSFLTFHHSV*FLEPLL
Trigger: AAGAAGTGGTTCGAGAAAGCAAACACTGTGATGAAA...GGTTAAGAAGGAATGGGACTCTGACACTTGGAATGGGGGACATCTGGATTGATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR GCA 90 bp GAAGTCCATGGAGATGGTGATGACAGAATCATTGTCAGCAAAGAAGGTAAATGTAAATCACCCGTCTTCTaGAACGATCACACTGGAAGC +
Preference number: 4 (lower is better)
Translates to: EVHGDGDDRIIVSKEGKCKSPVF*NDHTGS
Trigger: GCTTCCAGTGTGATCGTTGCAGAAGACGGGTGATTT...ACATTTACCTTCTTTGCTGACAATGATTCTGTCATCACCATCTCCATGGACTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433011.5
ENST00000442270.5
CDS-3UTR GCA 90 bp AAATTCGAAGAGTTCAAATCAGGATTAATCCTCTCCCTCTCCCAAATCTTCTCCCTGGGCTCTGAGCATTaGTCTCCCTGTTTGTATATC +
Preference number: 4 (lower is better)
Translates to: KFEEFKSGLILSLSQIFSLGSEH*SPCLYI
Trigger: GATATACAAACAGGGAGAGCAATGCTCAGAGCCCAG...GGAGAAGATTTGGGAGAGGGAGAGGATTAATCCTGATTTGAACTCTTCGAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433011.5
CDS-3UTR GCA 90 bp GAAGAATCCATTCAGTTTCTGCTCATGAAGCATACTAAAAATATCTCAATCCAGCCCGGCATCAATCTTTaGCCCAGGAATGGCCTCAGT +
Preference number: 4 (lower is better)
Translates to: EESIQFLLMKHTKNISIQPGINL*PRNGLS
Trigger: ACTGAGGCCATTCCTGGGGCAAAGATTGATGCCGGG...CTGGATTGAGATATTTTTAGTATGCTTCATGAGCAGAAACTGAATGGATTCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR GCA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGGTTTGCCTTGGCCCCTaGTTTAGTCATGGCATTGGG +
Preference number: 4 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKVCLGP*FSHGIG
Trigger: CCCAATGCCATGACTAAAGCAGGGGCCAAGGCAAAC...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR GCA 90 bp GAAGAATCCATTCAGTTTCTGCTCATGAAGCATACTAAAAATATCTCAATCCAGTCCACTGGCTTGGTCTaGAGTGTCAGCCCAAGACCT +
Preference number: 4 (lower is better)
Translates to: EESIQFLLMKHTKNISIQSTGLV*SVSPRP
Trigger: AGGTCTTGGGCTGACACTGCAGACCAAGCCAGTGGA...CTGGATTGAGATATTTTTAGTATGCTTCATGAGCAGAAACTGAATGGATTCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CCA 90 bp GATTCTGAGGAAAACCCAGGTTATCTTACAGGGGAAAGGATTCCATATATTGAATTTATGGCCAAGGTCTaGCTCTGTACCCCAACCACA +
Preference number: 4 (lower is better)
Translates to: DSEENPGYLTGERIPYIEFMAKV*LCTPTT
Trigger: TGTGGTTGGGGTACAGAGCCAGACCTTGGCCATAAA...TTCAATATATGGAATCCTTTCCCCTGTAAGATAACCTGGGTTTTCCTCAGAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CCA 90 bp GTTATCTTACAGGGGAAAGGATTCCATATATTGAAGCAAGATGGAGTGCCAGCCGCTCCAATCTCGACTTaGGGTTTAGTCTTAATCTCT +
Preference number: 4 (lower is better)
Translates to: VILQGKGFHILKQDGVPAAPIST*GLVLIS
Trigger: AGAGATTAAGACTAAACCCCAAGTCGAGATTGGAGC...GGCTGGCACTCCATCTTGCTTCAATATATGGAATCCTTTCCCCTGTAAGATAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CCA 90 bp TCTGAGGAAAACCCAGGTTATCTTACAGGGGAAAGGATTCCATATATTGAAGCATTCCAGCCACCACTTTaGACTCAGATTGAGTCTCTG +
Preference number: 4 (lower is better)
Translates to: SEENPGYLTGERIPYIEAFQPPL*TQIESL
Trigger: CAGAGACTCAATCTGAGTCCAAAGTGGTGGCTGGAA...TGCTTCAATATATGGAATCCTTTCCCCTGTAAGATAACCTGGGTTTTCCTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CCA 90 bp ATGATGATTAAGGCATTCTGGAAGTCCATGGAGATGGTGATGACAGAATCATTGGCCTCAGCATCAGTTTaGGTCACTGCTTCTTTCATG +
Preference number: 4 (lower is better)
Translates to: MMIKAFWKSMEMVMTESLASASV*VTASFM
Trigger: CATGAAAGAAGCAGTGACCCAAACTGATGCTGAGGC...CAATGATTCTGTCATCACCATCTCCATGGACTTCCAGAATGCCTTAATCATCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
CDS-3UTR CCA 90 bp TCTGAGGAAAACCCAGGTTATCTTACAGGGGAAAGGATTCCATATATTGAAGCAGCCTCAGCATCAGTTTaGGTCACTGCTTCTTTCATG +
Preference number: 4 (lower is better)
Translates to: SEENPGYLTGERIPYIEAASASV*VTASFM
Trigger: CATGAAAGAAGCAGTGACCCAAACTGATGCTGAGGC...TGCTTCAATATATGGAATCCTTTCCCCTGTAAGATAACCTGGGTTTTCCTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CCA 90 bp ATTAAGGCATTCTGGAAGTCCATGGAGATGGTGATGACAGAATCATTGTCAGCAGTTTCAGCTTTGGTCTaGGTCATTGCTTCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: IKAFWKSMEMVMTESLSAVSALV*VIASLL
Trigger: CAAGAGAGAAGCAATGACCCAGACCAAAGCTGAAAC...TGCTGACAATGATTCTGTCATCACCATCTCCATGGACTTCCAGAATGCCTTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
CDS-3UTR CCA 90 bp GAAGAATCCATTCAGTTTCTGCTCATGAAGCATACTAAAAATATCTCAATCCAGTCTTGGCCACTTCCCTaGGTACTGCCAAGGTCTCAC +
Preference number: 4 (lower is better)
Translates to: EESIQFLLMKHTKNISIQSWPLP*VLPRSH
Trigger: GTGAGACCTTGGCAGTACCCAGGGAAGTGGCCAAGA...CTGGATTGAGATATTTTTAGTATGCTTCATGAGCAGAAACTGAATGGATTCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CCA 90 bp TTCATCACAGTGTTTGCTTTCTCGAACCACTTCTTGTACCAACTGTTGCAGGTTCCAGAGCTCTTGTCTTaGTTTCATCCACAATTCCAG +
Preference number: 4 (lower is better)
Translates to: FITVFAFSNHFLYQLLQVPELLS*FHPQFQ
Trigger: CTGGAATTGTGGATGAAACCAAGACAAGAGCTCTGG...AACCTGCAACAGTTGGTACAAGAAGTGGTTCGAGAAAGCAAACACTGTGATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CCA 90 bp GAGTTCGTGTCATTTCCTGTGGTTTTCTCCAGGGTATTAAATCCTGTATTCTGGCCAGAGCTCTTGTCTTaGTTTCATCCACAATTCCAG +
Preference number: 4 (lower is better)
Translates to: EFVSFPVVFSRVLNPVFWPELLS*FHPQFQ
Trigger: CTGGAATTGTGGATGAAACCAAGACAAGAGCTCTGG...CCAGAATACAGGATTTAATACCCTGGAGAAAACCACAGGAAATGACACGAACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
CDS-3UTR CCA 90 bp CTAAAATCTCAGTTGGAAATGCAGAAATCACCCGTCTTCTGCAACGATCACACTGTCTTCATTGACAGCTaGGTAGCAGGTGATTCATCT +
Preference number: 4 (lower is better)
Translates to: LKSQLEMQKSPVFCNDHTVFIDS*VAGDSS
Trigger: AGATGAATCACCTGCTACCCAGCTGTCAATGAAGAC...AGTGTGATCGTTGCAGAAGACGGGTGATTTCTGCATTTCCAACTGAGATTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433011.5
ENST00000442270.5
CDS-3UTR CCA 90 bp GAGTTCGTGTCATTTCCTGTGGTTTTCTCCAGGGTATTAAATCCTGTATTCTGGGGGCTCAGGGGAATCTaGGGATATAAGATTTTTAGG +
Preference number: 4 (lower is better)
Translates to: EFVSFPVVFSRVLNPVFWGLRGI*GYKIFR
Trigger: CCTAAAAATCTTATATCCCCAGATTCCCCTGAGCCC...CCAGAATACAGGATTTAATACCCTGGAGAAAACCACAGGAAATGACACGAACTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
CDS-3UTR CCA 90 bp GAAGTCCATGGAGATGGTGATGACAGAATCATTGTCAGCAAAGAAGGTAAATGTAGTTCAAGGCCATCCTaGGCAATGTGGCAAAACCAT +
Preference number: 4 (lower is better)
Translates to: EVHGDGDDRIIVSKEGKCSSRPS*AMWQNH
Trigger: ATGGTTTTGCCACATTGCCCAGGATGGCCTTGAACT...ACATTTACCTTCTTTGCTGACAATGATTCTGTCATCACCATCTCCATGGACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000452188.5
CDS-3UTR CCA 90 bp TCTGAGGAAAACCCAGGTTATCTTACAGGGGAAAGGATTCCATATATTGAAGCAAGTTCAAGGCCATCCTaGGCAATGTGGCAAAACCAT +
Preference number: 4 (lower is better)
Translates to: SEENPGYLTGERIPYIEASSRPS*AMWQNH
Trigger: ATGGTTTTGCCACATTGCCCAGGATGGCCTTGAACT...TGCTTCAATATATGGAATCCTTTCCCCTGTAAGATAACCTGGGTTTTCCTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
CDS-3UTR CCA 90 bp AGCTACTGGAAGATATGTTCTGTTAGTTTTGAGGGCTGGGAAGTTCAAGACTGGGATGCCCCTAAGGAATaGTGTCTTATAAAGGCTCAT +
Preference number: 4 (lower is better)
Translates to: SYWKICSVSFEGWEVQDWDAPKE*CLIKAH
Trigger: ATGAGCCTTTATAAGACACCATTCCTTAGGGGCATC...CCAGTCTTGAACTTCCCAGCCCTCAAAACTAACAGAACATATCTTCCAGTAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433011.5
CDS-3UTR CCA 90 bp GTTATCTTACAGGGGAAAGGATTCCATATATTGAAGCAAGATGGAGTGCCAGCCCAACAAGCAATTTTGTaGCACCCAGAGGTTAGCAAT +
Preference number: 4 (lower is better)
Translates to: VILQGKGFHILKQDGVPAQQAIL*HPEVSN
Trigger: ATTGCTAACCTCTGGGTGCCACAAAATTGCTTGTTG...GGCTGGCACTCCATCTTGCTTCAATATATGGAATCCTTTCCCCTGTAAGATAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000452188.5
CDS-3UTR CCA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGCCTCAACCTGGGAATTaGCCCTCAAGTTTGCCTTGG +
Preference number: 4 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKPQPGN*PSSLPW
Trigger: CCAAGGCAAACTTGAGGGCCAATTCCCAGGTTGAGG...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CCA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGTATCAGCCTGAACACTaGCCACAAGCTGAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKYQPEH*PQAEAV
Trigger: CACAGCCTCAGCTTGTGGCCAGTGTTCAGGCTGATA...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CCA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGGACCCTCCATTGGCCTaGTCCACAATCCCAACTAAG +
Preference number: 4 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKDPPLA*STIPTK
Trigger: CTTAGTTGGGATTGTGGACCAGGCCAATGGAGGGTC...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CCA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGGAATCTCCACTAGACTaGTCCCTAAGCCCCAGCCTA +
Preference number: 4 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKESPLD*SLSPSL
Trigger: TAGGCTGGGGCTTAGGGACCAGTCTAGTGGAGATTC...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR TCA 90 bp ATTTCATCACAGTGTTTGCTTTCTCGAACCACTTCTTGTACCAACTGTTGCAGGATATTCCAGCCCTCCTaGTCAAGCTCCTTAGAATTT +
Preference number: 4 (lower is better)
Translates to: ISSQCLLSRTTSCTNCCRIFQPS*SSSLEF
Trigger: AAATTCTAAGGAGCTTGATCAGGAGGGCTGGAATAT...CCTGCAACAGTTGGTACAAGAAGTGGTTCGAGAAAGCAAACACTGTGATGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
CDS-3UTR TCA 90 bp AAATTCGAAGAGTTCAAATCAGGATTAATCCTCTCCCTCTCCCAAATCTTCTCCTGCAGTCCCATTAAATaGGTTCCTTGGTCAGAGACA +
Preference number: 4 (lower is better)
Translates to: KFEEFKSGLILSLSQIFSCSPIK*VPWSET
Trigger: TGTCTCTGACCAAGGAACTCATTTAATGGGACTGCA...GGAGAAGATTTGGGAGAGGGAGAGGATTAATCCTGATTTGAACTCTTCGAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354842.4
ENST00000442270.5
ENST00000452188.5
CDS-3UTR TCA 90 bp TTGATCCCTTTTCCCGCCATCTTCTATGGCAACTCTGGCATTTACACCTCACTTTCATATTCGCCCACCTaGAACCTGATTTATAACAAT +
Preference number: 4 (lower is better)
Translates to: LIPFPAIFYGNSGIYTSLSYSPT*NLIYNN
Trigger: ATTGTTATAAATCAGGTTTCAGGTGGGCGAATATGA...AAGTGAGGTGTAAATGCCAGAGTTGCCATAGAAGATGGCGGGAAAAGGGATCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433011.5
CDS-3UTR TCA 90 bp GAAGAATCCATTCAGTTTCTGCTCATGAAGCATACTAAAAATATCTCAATCCAGGTCTTGACCCCAGCCTaGGGTTGTGTACAGGTTTTC +
Preference number: 4 (lower is better)
Translates to: EESIQFLLMKHTKNISIQVLTPA*GCVQVF
Trigger: GAAAACCTGTACACAACCTCAGGCTGGGGTCAAGAC...CTGGATTGAGATATTTTTAGTATGCTTCATGAGCAGAAACTGAATGGATTCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR TCA 90 bp GAAGAATCCATTCAGTTTCTGCTCATGAAGCATACTAAAAATATCTCAATCCAGGAACTGGCCATAATCTaGAGCTGGGCAGTGCCCATT +
Preference number: 4 (lower is better)
Translates to: EESIQFLLMKHTKNISIQELAII*SWAVPI
Trigger: AATGGGCACTGCCCAGCTTCAGATTATGGCCAGTTC...CTGGATTGAGATATTTTTAGTATGCTTCATGAGCAGAAACTGAATGGATTCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR TCA 90 bp GAAGAATCCATTCAGTTTCTGCTCATGAAGCATACTAAAAATATCTCAATCCAGATATGGCCCAACCCCTaGATTAGGCACAGTAGTGGG +
Preference number: 4 (lower is better)
Translates to: EESIQFLLMKHTKNISIQIWPNP*IRHSSG
Trigger: CCCACTACTGTGCCTAATTCAGGGGTTGGGCCATAT...CTGGATTGAGATATTTTTAGTATGCTTCATGAGCAGAAACTGAATGGATTCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR TCA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGCCTTCTCCACTGGCTTaGTCCTCAAATCTAGGCTTG +
Preference number: 4 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKPSPLA*SSNLGL
Trigger: CAAGCCTAGATTTGAGGATCAAGCCAGTGGAGAAGG...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR TCA 90 bp GAAGAATCCATTCAGTTTCTGCTCATGAAGCATACTAAAAATATCTCAATCCAGCCTCCTCCACAAGCCTaGTCCTCAAATTCAGGCTTG +
Preference number: 4 (lower is better)
Translates to: EESIQFLLMKHTKNISIQPPPQA*SSNSGL
Trigger: CAAGCCTGAATTTGAGGATCAGGCTTGTGGAGGAGG...CTGGATTGAGATATTTTTAGTATGCTTCATGAGCAGAAACTGAATGGATTCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR TCA 90 bp ATTCATCTCCAAAATTTCATCACAGTGTTTGCTTTCTCGAACCACTTCTTGTACGACACAAGAAGATTGTaGGTTATCTGCGCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: IHLQNFITVFAFSNHFLYDTRRL*VICAGG
Trigger: CCCTCCTGCGCAGATAACTCACAATCTTCTTGTGTC...GTACAAGAAGTGGTTCGAGAAAGCAAACACTGTGATGAAATTTTGGAGATGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445416.5
CDS-3UTR GCA 90 bp ATTCATCTCCAAAATTTCATCACAGTGTTTGCTTTCTCGAACCACTTCTTGTACAGTGATCTTAAGCCCTaGAGCAGACATGCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: IHLQNFITVFAFSNHFLYSDLKP*SRHAGR
Trigger: TCTGCCTGCATGTCTGCTGCAGGGCTTAAGATCACT...GTACAAGAAGTGGTTCGAGAAAGCAAACACTGTGATGAAATTTTGGAGATGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR GCA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGCTCAGTCAGAGTCACTaGCTCTGTCATGACCAGTGT +
Preference number: 4 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKLSQSH*LCHDQC
Trigger: ACACTGGTCATGACAGAGGCAGTGACTCTGACTGAG...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR GCA 90 bp ATTCATCTCCAAAATTTCATCACAGTGTTTGCTTTCTCGAACCACTTCTTGTACCTCAGTCAGAGTCACTaGCTCTGTCATGACCAGTGT +
Preference number: 4 (lower is better)
Translates to: IHLQNFITVFAFSNHFLYLSQSH*LCHDQC
Trigger: ACACTGGTCATGACAGAGGCAGTGACTCTGACTGAG...GTACAAGAAGTGGTTCGAGAAAGCAAACACTGTGATGAAATTTTGGAGATGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR GCA 90 bp AAATTCGAAGAGTTCAAATCAGGATTAATCCTCTCCCTCTCCCAAATCTTCTCCATCAGTTTGGGTCACTaGTTCTTTCATGGCCACTTC +
Preference number: 4 (lower is better)
Translates to: KFEEFKSGLILSLSQIFSISLGH*FFHGHF
Trigger: GAAGTGGCCATGAAAGAAGCAGTGACCCAAACTGAT...GGAGAAGATTTGGGAGAGGGAGAGGATTAATCCTGATTTGAACTCTTCGAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
CDS-3UTR GCA 90 bp GAAGAATCCATTCAGTTTCTGCTCATGAAGCATACTAAAAATATCTCAATCCAGCACTTCCCTGGGTACTaGCAAGGTCTCACTCTGTGT +
Preference number: 4 (lower is better)
Translates to: EESIQFLLMKHTKNISIQHFPGY*QGLTLC
Trigger: ACACAGAGTGAGACCTTGGCAGTACCCAGGGAAGTG...CTGGATTGAGATATTTTTAGTATGCTTCATGAGCAGAAACTGAATGGATTCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR GCA 90 bp TTTGCTTTCTCGAACCACTTCTTGTACCAACTGTTGCAGGTTGGCTTCCCAGGAAAGATCTCAGAAGTGTaGTTTGCATATACACTTTCT +
Preference number: 4 (lower is better)
Translates to: FAFSNHFLYQLLQVGFPGKISEV*FAYTLS
Trigger: AGAAAGTGTATATGCAAAGCACACTTCTGAGATCTT...TCCTGGGAAGCCAACCTGCAACAGTTGGTACAAGAAGTGGTTCGAGAAAGCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
CDS-3UTR GCA 90 bp CAGGGGAAAGGATTCCATATATTGAAGCAAGATGGAGTGCCAGCCCTTAATAGGTATTTATTGAATTTCTaGACTTTCCCACTTCCCAGG +
Preference number: 4 (lower is better)
Translates to: QGKGFHILKQDGVPALNRYLLNF*TFPLPR
Trigger: CCTGGGAAGTGGGAAAGTGCAGAAATTCAATAAATA...CCTATTAAGGGCTGGCACTCCATCTTGCTTCAATATATGGAATCCTTTCCCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433011.5
CDS-3UTR GCA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGATTGGCCCTCAAGTTTaGCTTGGCCCCTGCTTTAGT +
Preference number: 4 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKIGPQV*LGPCFS
Trigger: ACTAAAGCAGGGGCCAAGGCAAACTTGAGGGCCAAT...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR GCA 90 bp GAAGAATCCATTCAGTTTCTGCTCATGAAGCATACTAAAAATATCTCAATCCAGACAGACCCTCTGGTCTaGCTTAGTCCCGGCTTTAGA +
Preference number: 4 (lower is better)
Translates to: EESIQFLLMKHTKNISIQTDPLV*LSPGFR
Trigger: TCTAAAGCCGGGACTAAGGCAGACCAGAGGGTCTGT...CTGGATTGAGATATTTTTAGTATGCTTCATGAGCAGAAACTGAATGGATTCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR GCA 90 bp GAAGAATCCATTCAGTTTCTGCTCATGAAGCATACTAAAAATATCTCAATCCAGCTCAGCCTCAGGCTTTaGATAGGCCTCATCTTCTGC +
Preference number: 4 (lower is better)
Translates to: EESIQFLLMKHTKNISIQLSLRL*IGLIFC
Trigger: GCAGAAGATGAGGCCTATGCAAAGCCTGAGGCTGAG...CTGGATTGAGATATTTTTAGTATGCTTCATGAGCAGAAACTGAATGGATTCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CCA 90 bp GAAGTCCATGGAGATGGTGATGACAGAATCATTGTCAGCAAAGAAGGTAAATGTGTTTCAGCTTTGGTCTaGGTCATTGCTTCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: EVHGDGDDRIIVSKEGKCVSALV*VIASLL
Trigger: CAAGAGAGAAGCAATGACCCAGACCAAAGCTGAAAC...ACATTTACCTTCTTTGCTGACAATGATTCTGTCATCACCATCTCCATGGACTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
CDS-3UTR CCA 90 bp GAAGAATCCATTCAGTTTCTGCTCATGAAGCATACTAAAAATATCTCAATCCAGTTCCAGTCTTGTTCGTaGCCCCCATCTTGGCCACTT +
Preference number: 4 (lower is better)
Translates to: EESIQFLLMKHTKNISIQFQSCS*PPSWPL
Trigger: AAGTGGCCAAGATGGGGGCCACGAACAAGACTGGAA...CTGGATTGAGATATTTTTAGTATGCTTCATGAGCAGAAACTGAATGGATTCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CCA 90 bp GAAAACCCAGGTTATCTTACAGGGGAAAGGATTCCATATATTGAAGCAAGATGGGTCTTCATTGACAGCTaGGTAGCAGGTGATTCATCT +
Preference number: 4 (lower is better)
Translates to: ENPGYLTGERIPYIEARWVFIDS*VAGDSS
Trigger: AGATGAATCACCTGCTACCCAGCTGTCAATGAAGAC...CCATCTTGCTTCAATATATGGAATCCTTTCCCCTGTAAGATAACCTGGGTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CCA 90 bp TCTATCAGACGAGGGTTTGGTAATAGCTGGACACAAGAAGATTGTGAGTTATCTGTCTTCATTGACAGCTaGGTAGCAGGTGATTCATCT +
Preference number: 4 (lower is better)
Translates to: SIRRGFGNSWTQEDCELSVFIDS*VAGDSS
Trigger: AGATGAATCACCTGCTACCCAGCTGTCAATGAAGAC...AGATAACTCACAATCTTCTTGTGTCCAGCTATTACCAAACCCTCGTCTGATAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445416.5
CDS-3UTR CCA 90 bp GAGTTCGTGTCATTTCCTGTGGTTTTCTCCAGGGTATTAAATCCTGTATTCTGGCCTTCTAGTATATGCTaGCTAGGTTATGTCCCGAAA +
Preference number: 4 (lower is better)
Translates to: EFVSFPVVFSRVLNPVFWPSSIC*LGYVPK
Trigger: TTTCGGGACATAACCTAGCCAGCATATACTAGAAGG...CCAGAATACAGGATTTAATACCCTGGAGAAAACCACAGGAAATGACACGAACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
CDS-3UTR CCA 90 bp ATTTCATCACAGTGTTTGCTTTCTCGAACCACTTCTTGTACCAACTGTTGCAGGCCTTCTAGTATATGCTaGCTAGGTTATGTCCCGAAA +
Preference number: 4 (lower is better)
Translates to: ISSQCLLSRTTSCTNCCRPSSIC*LGYVPK
Trigger: TTTCGGGACATAACCTAGCCAGCATATACTAGAAGG...CCTGCAACAGTTGGTACAAGAAGTGGTTCGAGAAAGCAAACACTGTGATGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
CDS-3UTR CCA 90 bp TTCATCACAGTGTTTGCTTTCTCGAACCACTTCTTGTACCAACTGTTGCAGGTTCCTTCTAGTATATGCTaGCTAGGTTATGTCCCGAAA +
Preference number: 4 (lower is better)
Translates to: FITVFAFSNHFLYQLLQVPSSIC*LGYVPK
Trigger: TTTCGGGACATAACCTAGCCAGCATATACTAGAAGG...AACCTGCAACAGTTGGTACAAGAAGTGGTTCGAGAAAGCAAACACTGTGATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
CDS-3UTR CCA 90 bp TCCAAAATTTCATCACAGTGTTTGCTTTCTCGAACCACTTCTTGTACCAACTGTTCCCGCCATCTTCTATaGCAACTCTGGCATTTACAC +
Preference number: 4 (lower is better)
Translates to: SKISSQCLLSRTTSCTNCSRHLL*QLWHLH
Trigger: GTGTAAATGCCAGAGTTGCCATAGAAGATGGCGGGA...ACAGTTGGTACAAGAAGTGGTTCGAGAAAGCAAACACTGTGATGAAATTTTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
CDS-3UTR CCA 90 bp GAAGAATCCATTCAGTTTCTGCTCATGAAGCATACTAAAAATATCTCAATCCAGCATCACCCTGGATCTTaGTCACAGCCTGAGACTGTG +
Preference number: 4 (lower is better)
Translates to: EESIQFLLMKHTKNISIQHHPGS*SQPETV
Trigger: CACAGTCTCAGGCTGTGACCAAGATCCAGGGTGATG...CTGGATTGAGATATTTTTAGTATGCTTCATGAGCAGAAACTGAATGGATTCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CCA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGCCTTACACATGGCATTaGTGTTACCCCCGGCATCAA +
Preference number: 4 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKPYTWH*CYPRHQ
Trigger: TTGATGCCGGGGGTAACACCAATGCCATGTGTAAGG...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CCA 90 bp GAAGAATCCATTCAGTTTCTGCTCATGAAGCATACTAAAAATATCTCAATCCAGGGCAAGGCCTCAACCTaGGAATTGGCCCTCAAGTTT +
Preference number: 4 (lower is better)
Translates to: EESIQFLLMKHTKNISIQGKAST*ELALKF
Trigger: AAACTTGAGGGCCAATTCCCAGGTTGAGGCCTTGCC...CTGGATTGAGATATTTTTAGTATGCTTCATGAGCAGAAACTGAATGGATTCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CCA 90 bp GAAGAATCCATTCAGTTTCTGCTCATGAAGCATACTAAAAATATCTCAATCCAGCTCTGCTCTTATCCCTaGCATCAGGCAAGGCCTCAA +
Preference number: 4 (lower is better)
Translates to: EESIQFLLMKHTKNISIQLCSYP*HQARPQ
Trigger: TTGAGGCCTTGCCTGATGCCAGGGATAAGAGCAGAG...CTGGATTGAGATATTTTTAGTATGCTTCATGAGCAGAAACTGAATGGATTCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CCA 90 bp GAAGAATCCATTCAGTTTCTGCTCATGAAGCATACTAAAAATATCTCAATCCAGCCCTACCATCAACCCTaGAATCAAGCAAGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: EESIQFLLMKHTKNISIQPYHQP*NQARPQ
Trigger: CTGAGGCCTTGCTTGATTCCAGGGTTGATGGTAGGG...CTGGATTGAGATATTTTTAGTATGCTTCATGAGCAGAAACTGAATGGATTCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CCA 90 bp GAAGAATCCATTCAGTTTCTGCTCATGAAGCATACTAAAAATATCTCAATCCAGCCTCATCTTCTGCTGTaGCTTCTGCCTCAGAAGTGG +
Preference number: 4 (lower is better)
Translates to: EESIQFLLMKHTKNISIQPHLLL*LLPQKW
Trigger: CCACTTCTGAGGCAGAAGCCACAGCAGAAGATGAGG...CTGGATTGAGATATTTTTAGTATGCTTCATGAGCAGAAACTGAATGGATTCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CCA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGAGGAACCTATTCCACTaGACTGATCCTCAGACCCTG +
Preference number: 4 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKRNLFH*TDPQTL
Trigger: CAGGGTCTGAGGATCAGTCCAGTGGAATAGGTTCCT...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CCA 90 bp GAAGAATCCATTCAGTTTCTGCTCATGAAGCATACTAAAAATATCTCAATCCAGTTTCCGACCAGATCATaGCTCCATCCCATGACCCCA +
Preference number: 4 (lower is better)
Translates to: EESIQFLLMKHTKNISIQFPTRS*LHPMTP
Trigger: TGGGGTCATGGGATGGAGCCATGATCTGGTCGGAAA...CTGGATTGAGATATTTTTAGTATGCTTCATGAGCAGAAACTGAATGGATTCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CCA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGCTTCAACTGGGAAGCTaGCCTCACTTTGGTGTGCAA +
Preference number: 4 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKLQLGS*PHFGVQ
Trigger: TTGCACACCAAAGTGAGGCCAGCTTCCCAGTTGAAG...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CCA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGGGACTCATCTTCAACTaGGAAGCTGGCCTCACTTTG +
Preference number: 4 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKGLIFN*EAGLTL
Trigger: CAAAGTGAGGCCAGCTTCCCAGTTGAAGATGAGTCC...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR TCA 90 bp AGGAAAACCCAGGTTATCTTACAGGGGAAAGGATTCCATATATTGAAGCAAGATTCCATGCTTCTAGATTaGTCTCCTCCTCTTTCCCTT +
Preference number: 4 (lower is better)
Translates to: RKTQVILQGKGFHILKQDSMLLD*SPPLSL
Trigger: AAGGGAAAGAGGAGGAGATCAATCTAGAAGCATGGA...ATCTTGCTTCAATATATGGAATCCTTTCCCCTGTAAGATAACCTGGGTTTTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR TCA 90 bp TCAGCTTTTTGTTATTCTTTTCCAGAGCTCAATCTGCTTAGCAACAGCCGCCCATATTTCTCAAAGGTCTaGTACATGGCACCAGTTAAT +
Preference number: 4 (lower is better)
Translates to: SAFCYSFPELNLLSNSRPYFSKV*YMAPVN
Trigger: ATTAACTGGTGCCATGTATCAGACCTTTGAGAAATA...TGGGCGGCTGTTGCTAAGCAGATTGAGCTCTGGAAAAGAATAACAAAAAGCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
CDS-3UTR TCA 90 bp ATTTCATCACAGTGTTTGCTTTCTCGAACCACTTCTTGTACCAACTGTTGCAGGGCTTTTAACAAATCCTaGGTCTACTCCTCAGATTTC +
Preference number: 4 (lower is better)
Translates to: ISSQCLLSRTTSCTNCCRAFNKS*VYSSDF
Trigger: GAAATCTGAGGAGTAGACTCAGGATTTGTTAAAAGC...CCTGCAACAGTTGGTACAAGAAGTGGTTCGAGAAAGCAAACACTGTGATGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR TCA 90 bp ATGATGATTAAGGCATTCTGGAAGTCCATGGAGATGGTGATGACAGAATCATTGTCCTTTATGTCTCTCTaGGTCTTTGATCCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: MMIKAFWKSMEMVMTESLSFMSL*VFDPFS
Trigger: GGAAAAGGGATCAAAGACTCAGAGAGACATAAAGGA...CAATGATTCTGTCATCACCATCTCCATGGACTTCCAGAATGCCTTAATCATCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000452188.5
CDS-3UTR TCA 90 bp AAATTCGAAGAGTTCAAATCAGGATTAATCCTCTCCCTCTCCCAAATCTTCTCCTCCTTTATGTCTCTCTaGGTCTTTGATCCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: KFEEFKSGLILSLSQIFSSFMSL*VFDPFS
Trigger: GGAAAAGGGATCAAAGACTCAGAGAGACATAAAGGA...GGAGAAGATTTGGGAGAGGGAGAGGATTAATCCTGATTTGAACTCTTCGAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
CDS-3UTR TCA 90 bp TCATCTCCAAAATTTCATCACAGTGTTTGCTTTCTCGAACCACTTCTTGTACCAAACCCATCCTCAACATaGCTTTGGATGGGGATAAAC +
Preference number: 4 (lower is better)
Translates to: SSPKFHHSVCFLEPLLVPNPSST*LWMGIN
Trigger: GTTTATCCCCATCCAAAGTCATGTTGAGGATGGGTT...TGGTACAAGAAGTGGTTCGAGAAAGCAAACACTGTGATGAAATTTTGGAGATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
CDS-3UTR TCA 90 bp TCCAAAATTTCATCACAGTGTTTGCTTTCTCGAACCACTTCTTGTACCAACTGTTGTGGCAAAACCATCTaGAAGATCTCAGAAGTGTGC +
Preference number: 4 (lower is better)
Translates to: SKISSQCLLSRTTSCTNCCGKTI*KISEVC
Trigger: GCACACTTCTGAGATCTTTCAGATGGTTTTGCCACA...ACAGTTGGTACAAGAAGTGGTTCGAGAAAGCAAACACTGTGATGAAATTTTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
CDS-3UTR TCA 90 bp GTTATCTTACAGGGGAAAGGATTCCATATATTGAAGCAAGATGGAGTGCCAGCCAGATACATAAATTCATaGGATCTCTGGACCAGTCTA +
Preference number: 4 (lower is better)
Translates to: VILQGKGFHILKQDGVPARYINS*DLWTSL
Trigger: TAGACTGGTCCAGAGATCTCATGAATTTATGTATCT...GGCTGGCACTCCATCTTGCTTCAATATATGGAATCCTTTCCCCTGTAAGATAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433011.5
ENST00000452188.5
CDS-3UTR TCA 90 bp GATTCTGAGGAAAACCCAGGTTATCTTACAGGGGAAAGGATTCCATATATTGAAGAGAAGGACAGGAAATaGATCAGGATGTGTGGGAAA +
Preference number: 4 (lower is better)
Translates to: DSEENPGYLTGERIPYIEEKDRK*IRMCGK
Trigger: TTTCCCACACATCCTGATTCATTTCCTGTCCTTCTC...TTCAATATATGGAATCCTTTCCCCTGTAAGATAACCTGGGTTTTCCTCAGAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433011.5
CDS-3UTR TCA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGTTCTTGGCCACAGTCTaGGGTTGTATACAAGCTCTC +
Preference number: 4 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKFLATV*GCIQAL
Trigger: GAGAGCTTGTATACAACCTCAGACTGTGGCCAAGAA...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR TCA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGCCTCAAACTTATCCTTaGTGCTGGTGTTATCCCCAG +
Preference number: 4 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKPQTYP*CWCYPQ
Trigger: CTGGGGATAACACCAGCATCAAGGATAAGTTTGAGG...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR TCA 90 bp AGGAAAACCCAGGTTATCTTACAGGGGAAAGGATTCCATATATTGAAGCAAGATATGCCAAGGCTGCAGTaGGCTAACTTGCATTTTTCT +
Preference number: 4 (lower is better)
Translates to: RKTQVILQGKGFHILKQDMPRLQ*ANLHFS
Trigger: AGAAAAATGCAAGTTAGCTCACTGCAGCCTTGGCAT...ATCTTGCTTCAATATATGGAATCCTTTCCCCTGTAAGATAACCTGGGTTTTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000445416.5
CDS-3UTR GCA 90 bp GAAGAATCCATTCAGTTTCTGCTCATGAAGCATACTAAAAATATCTCAATCCAGTCTTGCTCCAGTTTCTaGTCCAATCTCGACTTGGGG +
Preference number: 4 (lower is better)
Translates to: EESIQFLLMKHTKNISIQSCSSF*SNLDLG
Trigger: CCCCAAGTCGAGATTGGAGCAGAAACTGGAGCAAGA...CTGGATTGAGATATTTTTAGTATGCTTCATGAGCAGAAACTGAATGGATTCTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR GCA 90 bp GAAGAATCCATTCAGTTTCTGCTCATGAAGCATACTAAAAATATCTCAATCCAGCCTAGGCCCACTTCTTaGTCCAGTTTCTGCTCCAAT +
Preference number: 4 (lower is better)
Translates to: EESIQFLLMKHTKNISIQPRPTS*SSFCSN
Trigger: ATTGGAGCAGAAACTGGAGCAAGAAGTGGGCCTAGG...CTGGATTGAGATATTTTTAGTATGCTTCATGAGCAGAAACTGAATGGATTCTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR GCA 90 bp AGGAAAACCCAGGTTATCTTACAGGGGAAAGGATTCCATATATTGAAGCAAGATATCAGTTTGGGTCACTaGTTCTTTCATGGCCACTTC +
Preference number: 4 (lower is better)
Translates to: RKTQVILQGKGFHILKQDISLGH*FFHGHF
Trigger: GAAGTGGCCATGAAAGAAGCAGTGACCCAAACTGAT...ATCTTGCTTCAATATATGGAATCCTTTCCCCTGTAAGATAACCTGGGTTTTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR GCA 90 bp CAGGAAGCTACTGGAAGATATGTTAGTTTTGAGGGCTGGGAAGTTCAAGACTGGCTTGGTCTGTGTCACTaGTTCTTTCTTAACTATTTT +
Preference number: 4 (lower is better)
Translates to: QEATGRYVSFEGWEVQDWLGLCH*FFLNYF
Trigger: AAAATAGTTAAGAAAGAAGCAGTGACACAGACCAAG...CCAGTCTTGAACTTCCCAGCCCTCAAAACTAACATATCTTCCAGTAGCTTCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354842.4
ENST00000452188.5
CDS-3UTR GCA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGTTTGGTCTGGGTCATTaGTTCTCTCTTGGCCTCTGT +
Preference number: 4 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKFGLGH*FSLGLC
Trigger: ACAGAGGCCAAGAGAGAAGCAATGACCCAGACCAAA...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR GCA 90 bp TCAGCTTTTTGTTATTCTTTTCCAGAGCTCAATCTGCTTAGCAACAGCCGCCCATTTCATCACAGTGTTTaGTTTCTCGAACCACTTCTT +
Preference number: 4 (lower is better)
Translates to: SAFCYSFPELNLLSNSRPFHHSV*FLEPLL
Trigger: AAGAAGTGGTTCGAGAAAGCAAACACTGTGATGAAA...TGGGCGGCTGTTGCTAAGCAGATTGAGCTCTGGAAAAGAATAACAAAAAGCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
CDS-3UTR GCA 90 bp TTATGTCTCTCTGAGTCTTTGATCCCTTTTCCCGCCATCTTCTATGGCAACTCTTTTCATCACAGTGTTTaGTTTCTCGAACCACTTCTT +
Preference number: 4 (lower is better)
Translates to: LCLSESLIPFPAIFYGNSFHHSV*FLEPLL
Trigger: AAGAAGTGGTTCGAGAAAGCAAACACTGTGATGAAA...AGAGTTGCCATAGAAGATGGCGGGAAAAGGGATCAAAGACTCAGAGAGACATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
CDS-3UTR GCA 90 bp GAAGAATCCATTCAGTTTCTGCTCATGAAGCATACTAAAAATATCTCAATCCAGGTCTGCCCCAGACTCTaGCCTAGACATGGTTTTACA +
Preference number: 4 (lower is better)
Translates to: EESIQFLLMKHTKNISIQVCPRL*PRHGFT
Trigger: TGTAAAACCATGTCTAGGGCAGAGTCTGGGGCAGAC...CTGGATTGAGATATTTTTAGTATGCTTCATGAGCAGAAACTGAATGGATTCTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR GCA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGACCTTCCCCAACTTCTaGCTTAAGCACAACATTGGG +
Preference number: 4 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKTFPNF*LKHNIG
Trigger: CCCAATGTTGTGCTTAAGGCAGAAGTTGGGGAAGGT...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR GCA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGTTCTGCTGTGGCTTCTaGCTCAGAAGTGGACATAGA +
Preference number: 4 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKFCCGF*LRSGHR
Trigger: TCTATGTCCACTTCTGAGGCAGAAGCCACAGCAGAA...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR GCA 90 bp GAAGAATCCATTCAGTTTCTGCTCATGAAGCATACTAAAAATATCTCAATCCAGATAGGCCTCATCTTCTaGTGTGGCTTCTGCCTCAGA +
Preference number: 4 (lower is better)
Translates to: EESIQFLLMKHTKNISIQIGLIF*CGFCLR
Trigger: TCTGAGGCAGAAGCCACAGCAGAAGATGAGGCCTAT...CTGGATTGAGATATTTTTAGTATGCTTCATGAGCAGAAACTGAATGGATTCTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR GCA 90 bp GAAGAATCCATTCAGTTTCTGCTCATGAAGCATACTAAAAATATCTCAATCCAGAGACTCTACAGTGGTTaGATCTCCATCCCAGGACCA +
Preference number: 4 (lower is better)
Translates to: EESIQFLLMKHTKNISIQRLYSG*ISIPGP
Trigger: TGGTCCTGGGATGGAGATGCAACCACTGTAGAGTCT...CTGGATTGAGATATTTTTAGTATGCTTCATGAGCAGAAACTGAATGGATTCTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR GCA 90 bp GAAGAATCCATTCAGTTTCTGCTCATGAAGCATACTAAAAATATCTCAATCCAGTCACCTCAGGGTCATTaGATTCTGCTGCTAAGGCTC +
Preference number: 4 (lower is better)
Translates to: EESIQFLLMKHTKNISIQSPQGH*ILLLRL
Trigger: GAGCCTTAGCAGCAGAATGCAATGACCCTGAGGTGA...CTGGATTGAGATATTTTTAGTATGCTTCATGAGCAGAAACTGAATGGATTCTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CCA 90 bp GAAGAATCCATTCAGTTTCTGCTCATGAAGCATACTAAAAATATCTCAATCCAGCACTACAGCTGCCTCTaGAGGTGGACCTGTAATGAT +
Preference number: 4 (lower is better)
Translates to: EESIQFLLMKHTKNISIQHYSCL*RWTCND
Trigger: ATCATTACAGGTCCACCTCCAGAGGCAGCTGTAGTG...CTGGATTGAGATATTTTTAGTATGCTTCATGAGCAGAAACTGAATGGATTCTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CCA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGAGAGTCCTCACACTCTaGGCTCTTCCCTTGGTAAAT +
Preference number: 4 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKRVLTL*ALPLVN
Trigger: ATTTACCAAGGGAAGAGCCCAGAGTGTGAGGACTCT...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CCA 90 bp GAAGAATCCATTCAGTTTCTGCTCATGAAGCATACTAAAAATATCTCAATCCAGTTTATGGCCAAGGTCTaGCTCTGTACCCCAACCACA +
Preference number: 4 (lower is better)
Translates to: EESIQFLLMKHTKNISIQFMAKV*LCTPTT
Trigger: TGTGGTTGGGGTACAGAGCCAGACCTTGGCCATAAA...CTGGATTGAGATATTTTTAGTATGCTTCATGAGCAGAAACTGAATGGATTCTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CCA 90 bp TCATCTCCAAAATTTCATCACAGTGTTTGCTTTCTCGAACCACTTCTTGTACCATCTCTGCTTCATTTATaGCCAAGGTCTGGCTCTGTA +
Preference number: 4 (lower is better)
Translates to: SSPKFHHSVCFLEPLLVPSLLHL*PRSGSV
Trigger: TACAGAGCCAGACCTTGGCCATAAATGAAGCAGAGA...TGGTACAAGAAGTGGTTCGAGAAAGCAAACACTGTGATGAAATTTTGGAGATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CCA 90 bp TCCAAAATTTCATCACAGTGTTTGCTTTCTCGAACCACTTCTTGTACCAACTGTTCTCTGCTTCATTTATaGCCAAGGTCTGGCTCTGTA +
Preference number: 4 (lower is better)
Translates to: SKISSQCLLSRTTSCTNCSLLHL*PRSGSV
Trigger: TACAGAGCCAGACCTTGGCCATAAATGAAGCAGAGA...ACAGTTGGTACAAGAAGTGGTTCGAGAAAGCAAACACTGTGATGAAATTTTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CCA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGTTCCAGCCACCACTTTaGACTCAGATTGAGTCTCTG +
Preference number: 4 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKFQPPL*TQIESL
Trigger: CAGAGACTCAATCTGAGTCCAAAGTGGTGGCTGGAA...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CCA 90 bp ATGATGATTAAGGCATTCTGGAAGTCCATGGAGATGGTGATGACAGAATCATTGTATGAGTTTCAGCTTTaGTCTGGGTCATTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: MMIKAFWKSMEMVMTESLYEFQL*SGSLLL
Trigger: GAGAAGCAATGACCCAGACCAAAGCTGAAACTCATA...CAATGATTCTGTCATCACCATCTCCATGGACTTCCAGAATGCCTTAATCATCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
CDS-3UTR CCA 90 bp AGGAAAACCCAGGTTATCTTACAGGGGAAAGGATTCCATATATTGAAGCAAGATACTAGGGAATGCTCTTaGGATCAACACAGTCTCTTC +
Preference number: 4 (lower is better)
Translates to: RKTQVILQGKGFHILKQDTRECS*DQHSLF
Trigger: GAAGAGACTGTGTTGATCCCAAGAGCATTCCCTAGT...ATCTTGCTTCAATATATGGAATCCTTTCCCCTGTAAGATAACCTGGGTTTTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CCA 90 bp AGGAAAACCCAGGTTATCTTACAGGGGAAAGGATTCCATATATTGAAGCAAGATGGGCTCAGGGGAATCTaGGGATATAAGATTTTTAGG +
Preference number: 4 (lower is better)
Translates to: RKTQVILQGKGFHILKQDGLRGI*GYKIFR
Trigger: CCTAAAAATCTTATATCCCCAGATTCCCCTGAGCCC...ATCTTGCTTCAATATATGGAATCCTTTCCCCTGTAAGATAACCTGGGTTTTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CCA 90 bp AAACATAGCCCAAATCAGAGTGGGAGCAGTGAAGAAATACATTGTCTTCTCTCTCAACAAGCAATTTTGTaGCACCCAGAGGTTAGCAAT +
Preference number: 4 (lower is better)
Translates to: KHSPNQSGSSEEIHCLLSQQAIL*HPEVSN
Trigger: ATTGCTAACCTCTGGGTGCCACAAAATTGCTTGTTG...AGAGAGAAGACAATGTATTTCTTCACTGCTCCCACTCTGATTTGGGCTATGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000452188.5
CDS-3UTR CCA 90 bp GAAGAATCCATTCAGTTTCTGCTCATGAAGCATACTAAAAATATCTCAATCCAGCCTCAGCCTGTTTCTTaGCCACAGTCTGAGGTTGTA +
Preference number: 4 (lower is better)
Translates to: EESIQFLLMKHTKNISIQPQPVS*PQSEVV
Trigger: TACAACCTCAGACTGTGGCCAAGAAACAGGCTGAGG...CTGGATTGAGATATTTTTAGTATGCTTCATGAGCAGAAACTGAATGGATTCTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR TCA 90 bp GAAAACCCAGGTTATCTTACAGGGGAAAGGATTCCATATATTGAAGCAAGATGGTTTTCAGCCAATATATaGGTTTCAGCTTTGGTCTGG +
Preference number: 4 (lower is better)
Translates to: ENPGYLTGERIPYIEARWFSANI*VSALVW
Trigger: CCAGACCAAAGCTGAAACTCATATATTGGCTGAAAA...CCATCTTGCTTCAATATATGGAATCCTTTCCCCTGTAAGATAACCTGGGTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR TCA 90 bp AAACATAGCCCAAATCAGAGTGGGAGCAGTGAAGAAATACATTGTCTTCTCTCTTTTTCAGCCAATATATaGGTTTCAGCTTTGGTCTGG +
Preference number: 4 (lower is better)
Translates to: KHSPNQSGSSEEIHCLLSFSANI*VSALVW
Trigger: CCAGACCAAAGCTGAAACTCATATATTGGCTGAAAA...AGAGAGAAGACAATGTATTTCTTCACTGCTCCCACTCTGATTTGGGCTATGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
CDS-3UTR TCA 90 bp AAACATAGCCCAAATCAGAGTGGGAGCAGTGAAGAAATACATTGTCTTCTCTCTGCTTTTAACAAATCCTaGGTCTACTCCTCAGATTTC +
Preference number: 4 (lower is better)
Translates to: KHSPNQSGSSEEIHCLLSAFNKS*VYSSDF
Trigger: GAAATCTGAGGAGTAGACTCAGGATTTGTTAAAAGC...AGAGAGAAGACAATGTATTTCTTCACTGCTCCCACTCTGATTTGGGCTATGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000452188.5
CDS-3UTR TCA 90 bp CCATGGCACATAACTCGGCATAGAAGACTTGTCTTGGTTAGAATTTTAACTTTCAAGGATTCCATATATTaGAGCAAGATGGAGTGCCAG +
Preference number: 4 (lower is better)
Translates to: PWHITRHRRLVLVRILTFKDSIY*SKMECQ
Trigger: CTGGCACTCCATCTTGCTTCAATATATGGAATCCTT...GAAAGTTAAAATTCTAACCAAGACAAGTCTTCTATGCCGAGTTATGTGCCATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR TCA 90 bp TCCAAAATTTCATCACAGTGTTTGCTTTCTCGAACCACTTCTTGTACCAACTGTAAGGATTCCATATATTaGAGCAAGATGGAGTGCCAG +
Preference number: 4 (lower is better)
Translates to: SKISSQCLLSRTTSCTNCKDSIY*SKMECQ
Trigger: CTGGCACTCCATCTTGCTTCAATATATGGAATCCTT...ACAGTTGGTACAAGAAGTGGTTCGAGAAAGCAAACACTGTGATGAAATTTTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR TCA 90 bp ATTCATCTCCAAAATTTCATCACAGTGTTTGCTTTCTCGAACCACTTCTTGTACTGCAGTCCCATTAAATaGGTTCCTTGGTCAGAGACA +
Preference number: 4 (lower is better)
Translates to: IHLQNFITVFAFSNHFLYCSPIK*VPWSET
Trigger: TGTCTCTGACCAAGGAACTCATTTAATGGGACTGCA...GTACAAGAAGTGGTTCGAGAAAGCAAACACTGTGATGAAATTTTGGAGATGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354842.4
ENST00000442270.5
ENST00000452188.5
CDS-3UTR TCA 90 bp GATTCTGAGGAAAACCCAGGTTATCTTACAGGGGAAAGGATTCCATATATTGAATCAGAGTGGGAGCAGTaGAGAAATACATTGTCTTCT +
Preference number: 4 (lower is better)
Translates to: DSEENPGYLTGERIPYIESEWEQ*RNTLSS
Trigger: AGAAGACAATGTATTTCTTCACTGCTCCCACTCTGA...TTCAATATATGGAATCCTTTCCCCTGTAAGATAACCTGGGTTTTCCTCAGAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000452188.5
CDS-3UTR GCA 90 bp GAAGAATCCATTCAGTTTCTGCTCATGAAGCATACTAAAAATATCTCAATCCAGGGCCTCACTTTGGTGTaGAAACTTAGTTTCCGACCA +
Preference number: 4 (lower is better)
Translates to: EESIQFLLMKHTKNISIQGLTLV*KLSFRP
Trigger: TGGTCGGAAACTAAGTTTGCACACCAAAGTGAGGCC...CTGGATTGAGATATTTTTAGTATGCTTCATGAGCAGAAACTGAATGGATTCTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR GCA 90 bp TCTATCAGACGAGGGTTTGGTAATAGCTGGACACAAGAAGATTGTGAGTTATCTTGCAGTGAGCTAACTTaGATTTTTCTATCAGACGAG +
Preference number: 4 (lower is better)
Translates to: SIRRGFGNSWTQEDCELSCSELT*IFLSDE
Trigger: CTCGTCTGATAGAAAAATGCAAGTTAGCTCACTGCA...AGATAACTCACAATCTTCTTGTGTCCAGCTATTACCAAACCCTCGTCTGATAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445416.5
CDS-3UTR CCA 90 bp GAAGAATCCATTCAGTTTCTGCTCATGAAGCATACTAAAAATATCTCAATCCAGGCCTCAGCATCAGTTTaGGTCACTGCTTCTTTCATG +
Preference number: 4 (lower is better)
Translates to: EESIQFLLMKHTKNISIQASASV*VTASFM
Trigger: CATGAAAGAAGCAGTGACCCAAACTGATGCTGAGGC...CTGGATTGAGATATTTTTAGTATGCTTCATGAGCAGAAACTGAATGGATTCTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CCA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGGTTTCAGCTTTGGTCTaGGTCATTGCTTCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKVSALV*VIASLL
Trigger: CAAGAGAGAAGCAATGACCCAGACCAAAGCTGAAAC...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CCA 90 bp ATTCATCTCCAAAATTTCATCACAGTGTTTGCTTTCTCGAACCACTTCTTGTACGGGCTCAGGGGAATCTaGGGATATAAGATTTTTAGG +
Preference number: 4 (lower is better)
Translates to: IHLQNFITVFAFSNHFLYGLRGI*GYKIFR
Trigger: CCTAAAAATCTTATATCCCCAGATTCCCCTGAGCCC...GTACAAGAAGTGGTTCGAGAAAGCAAACACTGTGATGAAATTTTGGAGATGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CCA 90 bp TCCAAAATTTCATCACAGTGTTTGCTTTCTCGAACCACTTCTTGTACCAACTGTCAACAAGCAATTTTGTaGCACCCAGAGGTTAGCAAT +
Preference number: 4 (lower is better)
Translates to: SKISSQCLLSRTTSCTNCQQAIL*HPEVSN
Trigger: ATTGCTAACCTCTGGGTGCCACAAAATTGCTTGTTG...ACAGTTGGTACAAGAAGTGGTTCGAGAAAGCAAACACTGTGATGAAATTTTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000452188.5
CDS-3UTR CCA 90 bp ATTTCATCACAGTGTTTGCTTTCTCGAACCACTTCTTGTACCAACTGTTGCAGGTTCTCAGGAAGCTACTaGAAGATATGTTCTGTTAGT +
Preference number: 4 (lower is better)
Translates to: ISSQCLLSRTTSCTNCCRFSGSY*KICSVS
Trigger: ACTAACAGAACATATCTTCCAGTAGCTTCCTGAGAA...CCTGCAACAGTTGGTACAAGAAGTGGTTCGAGAAAGCAAACACTGTGATGAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433011.5
ENST00000445416.5
CDS-3UTR CCA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGTCCAGGACCCAATACTaGCTTCATTCTCATCATCAG +
Preference number: 4 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKSRTQY*LHSHHQ
Trigger: CTGATGATGAGAATGAAGCCAGTATTGGGTCCTGGA...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CCA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGCTCAAATATAGGCTTTaGCCCAACACTAGCTGGATG +
Preference number: 4 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKLKYRL*PNTSWM
Trigger: CATCCAGCTAGTGTTGGGCCAAAGCCTATATTTGAG...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CCA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGCCTCAAATTCAGGCTTaGAACAGTCAACAGCCTGAT +
Preference number: 4 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKPQIQA*NSQQPD
Trigger: ATCAGGCTGTTGACTGTTCCAAGCCTGAATTTGAGG...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CCA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGCCTCAATATCAGGGCTaGACTCTCTACTTAGCTCAT +
Preference number: 4 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKPQYQG*TLYLAH
Trigger: ATGAGCTAAGTAGAGAGTCCAGCCCTGATATTGAGG...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423738.4
3UTR CAA 72 bp GGAATGGTGTCTTATAAAGGCTCATCATCTTCTCTGTaGTCAGGTTGGGCACTTAGTATTAGTACAAGATCA +
Preference number: 4 (lower is better)
Translates to: GMVSYKGSSSSL*SGWALSISTRS
Trigger: TGATCTTGTACTAATACTAAGTGCCCAACCTGACAACAGAGAAGATGATGAGCCTTTATAAGACACCATTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000452188.5
CDS-3UTR TCA 90 bp TCCAAAATTTCATCACAGTGTTTGCTTTCTCGAACCACTTCTTGTACCAACTGTGCTTTTAACAAATCCTaGGTCTACTCCTCAGATTTC +
Preference number: 4 (lower is better)
Translates to: SKISSQCLLSRTTSCTNCAFNKS*VYSSDF
Trigger: GAAATCTGAGGAGTAGACTCAGGATTTGTTAAAAGC...ACAGTTGGTACAAGAAGTGGTTCGAGAAAGCAAACACTGTGATGAAATTTTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR TCA 90 bp ATTCATCTCCAAAATTTCATCACAGTGTTTGCTTTCTCGAACCACTTCTTGTACTCCTTTATGTCTCTCTaGGTCTTTGATCCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: IHLQNFITVFAFSNHFLYSFMSL*VFDPFS
Trigger: GGAAAAGGGATCAAAGACTCAGAGAGACATAAAGGA...GTACAAGAAGTGGTTCGAGAAAGCAAACACTGTGATGAAATTTTGGAGATGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
CDS-3UTR TCA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGTCTCCATCCATGGTCTaGAACCTAAATTTGATCCAC +
Preference number: 4 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKSPSMV*NLNLIH
Trigger: GTGGATCAAATTTAGGTTTCAGACCATGGATGGAGA...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR TCA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGCCTTCTTCTGTGGTCTaGTTTTCAAATCTAGGCTTG +
Preference number: 4 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKPSSVV*FSNLGL
Trigger: CAAGCCTAGATTTGAAAATCAGACCACAGAAGAAGG...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR GCA 90 bp GAAGAATCCATTCAGTTTCTGCTCATGAAGCATACTAAAAATATCTCAATCCAGATCAGTTTGGGTCACTaGTTCTTTCATGGCCACTTC +
Preference number: 4 (lower is better)
Translates to: EESIQFLLMKHTKNISIQISLGH*FFHGHF
Trigger: GAAGTGGCCATGAAAGAAGCAGTGACCCAAACTGAT...CTGGATTGAGATATTTTTAGTATGCTTCATGAGCAGAAACTGAATGGATTCTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR GCA 90 bp AAACATAGCCCAAATCAGAGTGGGAGCAGTGAAGAAATACATTGTCTTCTCTCTTTTCATCACAGTGTTTaGTTTCTCGAACCACTTCTT +
Preference number: 4 (lower is better)
Translates to: KHSPNQSGSSEEIHCLLSFHHSV*FLEPLL
Trigger: AAGAAGTGGTTCGAGAAAGCAAACACTGTGATGAAA...AGAGAGAAGACAATGTATTTCTTCACTGCTCCCACTCTGATTTGGGCTATGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000452188.5
CDS-3UTR GCA 90 bp ATGATGATTAAGGCATTCTGGAAGTCCATGGAGATGGTGATGACAGAATCATTGTTTCATCACAGTGTTTaGTTTCTCGAACCACTTCTT +
Preference number: 4 (lower is better)
Translates to: MMIKAFWKSMEMVMTESLFHHSV*FLEPLL
Trigger: AAGAAGTGGTTCGAGAAAGCAAACACTGTGATGAAA...CAATGATTCTGTCATCACCATCTCCATGGACTTCCAGAATGCCTTAATCATCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000452188.5
CDS-3UTR GCA 90 bp TTCATCACAGTGTTTGCTTTCTCGAACCACTTCTTGTACCAACTGTTGCAGGTTAAGATCTCAGAAGTGTaGTTTGCATATACACTTTCT +
Preference number: 4 (lower is better)
Translates to: FITVFAFSNHFLYQLLQVKISEV*FAYTLS
Trigger: AGAAAGTGTATATGCAAAGCACACTTCTGAGATCTT...AACCTGCAACAGTTGGTACAAGAAGTGGTTCGAGAAAGCAAACACTGTGATGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
CDS-3UTR GCA 90 bp ATGATGATTAAGGCATTCTGGAAGTCCATGGAGATGGTGATGACAGAATCATTGAGTGAAAAGGGCCACTaGTTTCATGACTTCTTTATT +
Preference number: 4 (lower is better)
Translates to: MMIKAFWKSMEMVMTESLSEKGH*FHDFFI
Trigger: AATAAAGAAGTCATGAAAGCAGTGGCCCTTTTCACT...CAATGATTCTGTCATCACCATCTCCATGGACTTCCAGAATGCCTTAATCATCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433011.5
CDS-3UTR CCA 90 bp GAAGAATCCATTCAGTTTCTGCTCATGAAGCATACTAAAAATATCTCAATCCAGTCTCTGCTTCATTTATaGCCAAGGTCTGGCTCTGTA +
Preference number: 4 (lower is better)
Translates to: EESIQFLLMKHTKNISIQSLLHL*PRSGSV
Trigger: TACAGAGCCAGACCTTGGCCATAAATGAAGCAGAGA...CTGGATTGAGATATTTTTAGTATGCTTCATGAGCAGAAACTGAATGGATTCTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CCA 90 bp ATTCATCTCCAAAATTTCATCACAGTGTTTGCTTTCTCGAACCACTTCTTGTACGCTCCAATCTCGACTTaGGGTTTAGTCTTAATCTCT +
Preference number: 4 (lower is better)
Translates to: IHLQNFITVFAFSNHFLYAPIST*GLVLIS
Trigger: AGAGATTAAGACTAAACCCCAAGTCGAGATTGGAGC...GTACAAGAAGTGGTTCGAGAAAGCAAACACTGTGATGAAATTTTGGAGATGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CCA 90 bp GAAGAATCCATTCAGTTTCTGCTCATGAAGCATACTAAAAATATCTCAATCCAGCCAGAGCTCTTGTCTTaGTTTCATCCACAATTCCAG +
Preference number: 4 (lower is better)
Translates to: EESIQFLLMKHTKNISIQPELLS*FHPQFQ
Trigger: CTGGAATTGTGGATGAAACCAAGACAAGAGCTCTGG...CTGGATTGAGATATTTTTAGTATGCTTCATGAGCAGAAACTGAATGGATTCTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CCA 90 bp GAAGAATCCATTCAGTTTCTGCTCATGAAGCATACTAAAAATATCTCAATCCAGCCTCAGTCTGGGTTTTaGCAAAAATTTGAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: EESIQFLLMKHTKNISIQPQSGF*QKFEAE
Trigger: CTCAGCCTCAAATTTTTGCCAAAACCCAGACTGAGG...CTGGATTGAGATATTTTTAGTATGCTTCATGAGCAGAAACTGAATGGATTCTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CCA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGGTTTTAACCTTCCTATaGTTTTCAGCAGCCACTGAG +
Preference number: 4 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKVLTFL*FSAATE
Trigger: CTCAGTGGCTGCTGAAAACCATAGGAAGGTTAAAAC...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423738.4
3UTR CAA 72 bp TTCTGGAAGTCCATGGAGATGGTGATGACAGAATCATaGTCAGCAAAGAAGGTAAATGTGTGTCTAAAATAC +
Preference number: 4 (lower is better)
Translates to: FWKSMEMVMTES*SAKKVNVCLKY
Trigger: GTATTTTAGACACACATTTACCTTCTTTGCTGACAATGATTCTGTCATCACCATCTCCATGGACTTCCAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000452188.5
3UTR CAA 72 bp AGTGAGCTAACTTGCATTTTTCTATCAGACGAGGGTTaGGTAATAGCTGGACACAAGAAGATTGTGAGTTAT +
Preference number: 4 (lower is better)
Translates to: SELTCIFLSDEG*VIAGHKKIVSY
Trigger: ATAACTCACAATCTTCTTGTGTCCAGCTATTACCAAACCCTCGTCTGATAGAAAAATGCAAGTTAGCTCACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445416.5
CDS-3UTR TCA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGTTTTCAGCCAATATATaGGTTTCAGCTTTGGTCTGG +
Preference number: 4 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKFSANI*VSALVW
Trigger: CCAGACCAAAGCTGAAACTCATATATTGGCTGAAAA...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR TCA 90 bp ATTCATCTCCAAAATTTCATCACAGTGTTTGCTTTCTCGAACCACTTCTTGTACTTTTCAGCCAATATATaGGTTTCAGCTTTGGTCTGG +
Preference number: 4 (lower is better)
Translates to: IHLQNFITVFAFSNHFLYFSANI*VSALVW
Trigger: CCAGACCAAAGCTGAAACTCATATATTGGCTGAAAA...GTACAAGAAGTGGTTCGAGAAAGCAAACACTGTGATGAAATTTTGGAGATGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR TCA 90 bp GATTCTGAGGAAAACCCAGGTTATCTTACAGGGGAAAGGATTCCATATATTGAAAGATACATAAATTCATaGGATCTCTGGACCAGTCTA +
Preference number: 4 (lower is better)
Translates to: DSEENPGYLTGERIPYIERYINS*DLWTSL
Trigger: TAGACTGGTCCAGAGATCTCATGAATTTATGTATCT...TTCAATATATGGAATCCTTTCCCCTGTAAGATAACCTGGGTTTTCCTCAGAATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433011.5
ENST00000452188.5
CDS-3UTR GCA 90 bp ATGATGATTAAGGCATTCTGGAAGTCCATGGAGATGGTGATGACAGAATCATTGCTTGGTCTGTGTCACTaGTTCTTTCTTAACTATTTT +
Preference number: 4 (lower is better)
Translates to: MMIKAFWKSMEMVMTESLLGLCH*FFLNYF
Trigger: AAAATAGTTAAGAAAGAAGCAGTGACACAGACCAAG...CAATGATTCTGTCATCACCATCTCCATGGACTTCCAGAATGCCTTAATCATCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
CDS-3UTR GCA 90 bp TCATCTCCAAAATTTCATCACAGTGTTTGCTTTCTCGAACCACTTCTTGTACCAACTTACAGAGGTATATaGAAGATTATGAGACCCAAC +
Preference number: 4 (lower is better)
Translates to: SSPKFHHSVCFLEPLLVPTYRGI*KIMRPN
Trigger: GTTGGGTCTCATAATCTTGCATATACCTCTGTAAGT...TGGTACAAGAAGTGGTTCGAGAAAGCAAACACTGTGATGAAATTTTGGAGATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000452188.5
CDS-3UTR GCA 90 bp TCCAAAATTTCATCACAGTGTTTGCTTTCTCGAACCACTTCTTGTACCAACTGTACTTACAGAGGTATATaGAAGATTATGAGACCCAAC +
Preference number: 4 (lower is better)
Translates to: SKISSQCLLSRTTSCTNCTYRGI*KIMRPN
Trigger: GTTGGGTCTCATAATCTTGCATATACCTCTGTAAGT...ACAGTTGGTACAAGAAGTGGTTCGAGAAAGCAAACACTGTGATGAAATTTTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000452188.5
CDS-3UTR GCA 90 bp GAAGAATCCATTCAGTTTCTGCTCATGAAGCATACTAAAAATATCTCAATCCAGCTTAGTCCAGCCAACTaGACATTTGAATTCAAGGGA +
Preference number: 4 (lower is better)
Translates to: EESIQFLLMKHTKNISIQLSPAN*TFEFKG
Trigger: TCCCTTGAATTCAAATGTGCAGTTGGCTGGACTAAG...CTGGATTGAGATATTTTTAGTATGCTTCATGAGCAGAAACTGAATGGATTCTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR GCA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGCTGGTAATAGTCAGATaGCTTATCAACCTTAGTCCA +
Preference number: 4 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKLVIVR*LINLSP
Trigger: TGGACTAAGGTTGATAAGGCATCTGACTATTACCAG...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CCA 90 bp GAAGAATCCATTCAGTTTCTGCTCATGAAGCATACTAAAAATATCTCAATCCAGGCTCCAATCTCGACTTaGGGTTTAGTCTTAATCTCT +
Preference number: 4 (lower is better)
Translates to: EESIQFLLMKHTKNISIQAPIST*GLVLIS
Trigger: AGAGATTAAGACTAAACCCCAAGTCGAGATTGGAGC...CTGGATTGAGATATTTTTAGTATGCTTCATGAGCAGAAACTGAATGGATTCTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CCA 90 bp GAAGAATCCATTCAGTTTCTGCTCATGAAGCATACTAAAAATATCTCAATCCAGTATGAGTTTCAGCTTTaGTCTGGGTCATTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: EESIQFLLMKHTKNISIQYEFQL*SGSLLL
Trigger: GAGAAGCAATGACCCAGACCAAAGCTGAAACTCATA...CTGGATTGAGATATTTTTAGTATGCTTCATGAGCAGAAACTGAATGGATTCTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CCA 90 bp TCCAAAATTTCATCACAGTGTTTGCTTTCTCGAACCACTTCTTGTACCAACTGTAGCCGCCCAATTTTCTaGCCTTCCTTATATTTAATA +
Preference number: 4 (lower is better)
Translates to: SKISSQCLLSRTTSCTNCSRPIF*PSLYLI
Trigger: TATTAAATATAAGGAAGGCCAGAAAATTGGGCGGCT...ACAGTTGGTACAAGAAGTGGTTCGAGAAAGCAAACACTGTGATGAAATTTTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
CDS-3UTR CCA 90 bp CCATGGCACATAACTCGGCATAGAAGACTTGTCTTGGTTAGAATTTTAACTTTCAGCCGCCCAATTTTCTaGCCTTCCTTATATTTAATA +
Preference number: 4 (lower is better)
Translates to: PWHITRHRRLVLVRILTFSRPIF*PSLYLI
Trigger: TATTAAATATAAGGAAGGCCAGAAAATTGGGCGGCT...GAAAGTTAAAATTCTAACCAAGACAAGTCTTCTATGCCGAGTTATGTGCCATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
CDS-3UTR CCA 90 bp AGGAAAACCCAGGTTATCTTACAGGGGAAAGGATTCCATATATTGAAGCAAGATTTCTCAGGAAGCTACTaGAAGATATGTTCTGTTAGT +
Preference number: 4 (lower is better)
Translates to: RKTQVILQGKGFHILKQDFSGSY*KICSVS
Trigger: ACTAACAGAACATATCTTCCAGTAGCTTCCTGAGAA...ATCTTGCTTCAATATATGGAATCCTTTCCCCTGTAAGATAACCTGGGTTTTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433011.5
ENST00000445416.5
CDS-3UTR CCA 90 bp GAAGAATCCATTCAGTTTCTGCTCATGAAGCATACTAAAAATATCTCAATCCAGTCCTGGTTTGTTTTCTaGACTCATCTTCAACTGGGA +
Preference number: 4 (lower is better)
Translates to: EESIQFLLMKHTKNISIQSWFVF*THLQLG
Trigger: TCCCAGTTGAAGATGAGTCCAGAAAACAAACCAGGA...CTGGATTGAGATATTTTTAGTATGCTTCATGAGCAGAAACTGAATGGATTCTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR TCA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGTCTCAATCATGCAAATaGGTTTTTCAAGATCTCGTG +
Preference number: 4 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKSQSCK*VFQDLV
Trigger: CACGAGATCTTGAAAAACTCATTTGCATGATTGAGA...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR TCA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGTTATTGGCTATTTCATaGACAGAAGGATCTTCAGTC +
Preference number: 4 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKLLAIS*TEGSSV
Trigger: GACTGAAGATCCTTCTGTTCATGAAATAGCCAATAA...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR TCA 90 bp GAAGAATCCATTCAGTTTCTGCTCATGAAGCATACTAAAAATATCTCAATCCAGAATTCAAGGGATAGGTaGCAGTGTCTTCACATACTT +
Preference number: 4 (lower is better)
Translates to: EESIQFLLMKHTKNISIQNSRDR*QCLHIL
Trigger: AAGTATGTGAAGACACTGTCACCTATCCCTTGAATT...CTGGATTGAGATATTTTTAGTATGCTTCATGAGCAGAAACTGAATGGATTCTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR GCA 90 bp GATTCTGAGGAAAACCCAGGTTATCTTACAGGGGAAAGGATTCCATATATTGAATTTAGTCTTAATCTCTaGTTCATTTATGGCCAAGGT +
Preference number: 4 (lower is better)
Translates to: DSEENPGYLTGERIPYIEFSLNL*FIYGQG
Trigger: ACCTTGGCCATAAATGAAGCAGAGATTAAGACTAAA...TTCAATATATGGAATCCTTTCCCCTGTAAGATAACCTGGGTTTTCCTCAGAATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR GCA 90 bp TCCAAAATTTCATCACAGTGTTTGCTTTCTCGAACCACTTCTTGTACCAACTGTTTTAGTCTTAATCTCTaGTTCATTTATGGCCAAGGT +
Preference number: 4 (lower is better)
Translates to: SKISSQCLLSRTTSCTNCFSLNL*FIYGQG
Trigger: ACCTTGGCCATAAATGAAGCAGAGATTAAGACTAAA...ACAGTTGGTACAAGAAGTGGTTCGAGAAAGCAAACACTGTGATGAAATTTTGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR GCA 90 bp GAAGAATCCATTCAGTTTCTGCTCATGAAGCATACTAAAAATATCTCAATCCAGGTCAGCTCCAGTTATTaGCTTAGATATGACATTGGT +
Preference number: 4 (lower is better)
Translates to: EESIQFLLMKHTKNISIQVSSSY*LRYDIG
Trigger: ACCAATGTCATATCTAAGGCAATAACTGGAGCTGAC...CTGGATTGAGATATTTTTAGTATGCTTCATGAGCAGAAACTGAATGGATTCTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CCA 90 bp CCATGGCACATAACTCGGCATAGAAGACTTGTCTTGGTTAGAATTTTAACTTTCCCTATTTGGCCATCTTaGAATGATCAGTCTAAAATT +
Preference number: 4 (lower is better)
Translates to: PWHITRHRRLVLVRILTFPIWPS*NDQSKI
Trigger: AATTTTAGACTGATCATTCCAAGATGGCCAAATAGG...GAAAGTTAAAATTCTAACCAAGACAAGTCTTCTATGCCGAGTTATGTGCCATGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433011.5
ENST00000442270.5
CDS-3UTR CCA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGCTTTATCATCAGGCCTaGACACAATATCAGCTTTTT +
Preference number: 4 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKLYHQA*TQYQLF
Trigger: AAAAAGCTGATATTGTGTCCAGGCCTGATGATAAAG...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR GCA 90 bp ATTCATCTCCAAAATTTCATCACAGTGTTTGCTTTCTCGAACCACTTCTTGTACTTTAGTCTTAATCTCTaGTTCATTTATGGCCAAGGT +
Preference number: 4 (lower is better)
Translates to: IHLQNFITVFAFSNHFLYFSLNL*FIYGQG
Trigger: ACCTTGGCCATAAATGAAGCAGAGATTAAGACTAAA...GTACAAGAAGTGGTTCGAGAAAGCAAACACTGTGATGAAATTTTGGAGATGAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR GCA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGCTTGGTCTGTGTCACTaGTTCTTTCTTAACTATTTT +
Preference number: 4 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKLGLCH*FFLNYF
Trigger: AAAATAGTTAAGAAAGAAGCAGTGACACAGACCAAG...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR GCA 90 bp ATTCATCTCCAAAATTTCATCACAGTGTTTGCTTTCTCGAACCACTTCTTGTACAAGATCTCAGAAGTGTaGTTTGCATATACACTTTCT +
Preference number: 4 (lower is better)
Translates to: IHLQNFITVFAFSNHFLYKISEV*FAYTLS
Trigger: AGAAAGTGTATATGCAAAGCACACTTCTGAGATCTT...GTACAAGAAGTGGTTCGAGAAAGCAAACACTGTGATGAAATTTTGGAGATGAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
CDS-3UTR CCA 90 bp GAAGAATCCATTCAGTTTCTGCTCATGAAGCATACTAAAAATATCTCAATCCAGTTTTTCAAGATCTCGTaGATCCATATTAGCTTCGTG +
Preference number: 4 (lower is better)
Translates to: EESIQFLLMKHTKNISIQFFKIS*IHISFV
Trigger: CACGAAGCTAATATGGATCCACGAGATCTTGAAAAA...CTGGATTGAGATATTTTTAGTATGCTTCATGAGCAGAAACTGAATGGATTCTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR GCA 90 bp GAAGAATCCATTCAGTTTCTGCTCATGAAGCATACTAAAAATATCTCAATCCAGTTTAGTCTTAATCTCTaGTTCATTTATGGCCAAGGT +
Preference number: 4 (lower is better)
Translates to: EESIQFLLMKHTKNISIQFSLNL*FIYGQG
Trigger: ACCTTGGCCATAAATGAAGCAGAGATTAAGACTAAA...CTGGATTGAGATATTTTTAGTATGCTTCATGAGCAGAAACTGAATGGATTCTTC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CCA 90 bp GAAGAATCCATTCAGTTTCTGCTCATGAAGCATACTAAAAATATCTCAATCCAGTTACTCAAATTTGTTTaGGAACATACAGCCAATCAG +
Preference number: 4 (lower is better)
Translates to: EESIQFLLMKHTKNISIQLLKFV*EHTANQ
Trigger: CTGATTGGCTGTATGTTCCCAAACAAATTTGAGTAA...CTGGATTGAGATATTTTTAGTATGCTTCATGAGCAGAAACTGAATGGATTCTTC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CAA 90 bp CCTAGTTATAGGCCCAGTGGCCAGGATAGGAGGTGCGGGCAGATTCTGAGGAAACTCTTGGCCTCTGTCTaGGCAACCAGCGCCCAAGCT +
Preference number: 5 (lower is better)
Translates to: PSYRPSGQDRRCGQILRKLLASV*ATSAQA
Trigger: AGCTTGGGCGCTGGTTGCCAAGACAGAGGCCAAGAG...TTTCCTCAGAATCTGCCCGCACCTCCTATCCTGGCCACTGGGCCTATAACTAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS CCA 90 bp CCCCTGCTAAAAGCACGAACAAGGTATGGTAGAGCGCACTCGGGCTaGGGTAAAGAGAGTGGTAGTTGTGGGTGTAGGCCTGTGAGGGTG +
Preference number: 5 (lower is better)
Translates to: PLLKARTRYGRAHSG*GKESGSCGCRPVRV
Trigger: CACCCTCACAGGCCTACACCCACAACTACCACTCTCTTTACCCCAGCCCGAGTGCGCTCTACCATACCTTGTTCGTGCTTTTAGCAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000423738.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS GCA 90 bp CAGTGTTCCAGCCACCACTTTGGACTCAGATTGAGTCTCTGGCTCTaGCCCAACCATTGCCTTGGCCTGAGAGTTGGCTCTGTGTATGGC +
Preference number: 5 (lower is better)
Translates to: QCSSHHFGLRLSLWL*PNHCLGLRVGSVYG
Trigger: GCCATACACAGAGCCAACTCTCAGGCCAAGGCAATGGTTGGGGCAGAGCCAGAGACTCAATCTGAGTCCAAAGTGGTGGCTGGAACACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000423738.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS GCA 90 bp CATGGCCACTTCCCTGGCTTTGGCCTTGACCTCAGTCAGAGTCACTaGCTCTGTCATGACCAGTGTTCCAGCCACCACTTTGGACTCAGA +
Preference number: 5 (lower is better)
Translates to: HGHFPGFGLDLSQSH*LCHDQCSSHHFGLR
Trigger: TCTGAGTCCAAAGTGGTGGCTGGAACACTGGTCATGACAGAGGCAGTGACTCTGACTGAGGTCAAGGCCAAAGCCAGGGAAGTGGCCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000423738.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS GCA 90 bp CTCAGCCTCAGGCTTTGCATAGGCCTCATCTTCTGCTGTGGCTTCTaGCTCAGAAGTGGACATAGACTTGTCCCTTGCCCCAGGCAAGGT +
Preference number: 5 (lower is better)
Translates to: LSLRLCIGLIFCCGF*LRSGHRLVPCPRQG
Trigger: ACCTTGCCTGGGGCAAGGGACAAGTCTATGTCCACTTCTGAGGCAGAAGCCACAGCAGAAGATGAGGCCTATGCAAAGCCTGAGGCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS GCA 90 bp AGTGGGCATGGCCTCAGCCTCAGGCTTTGCATAGGCCTCATCTTCTaGTGTGGCTTCTGCCTCAGAAGTGGACATAGACTTGTCCCTTGC +
Preference number: 5 (lower is better)
Translates to: SGHGLSLRLCIGLIF*CGFCLRSGHRLVPC
Trigger: GCAAGGGACAAGTCTATGTCCACTTCTGAGGCAGAAGCCACAGCAGAAGATGAGGCCTATGCAAAGCCTGAGGCTGAGGCCATGCCCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS CCA 90 bp CCATGTCCTCAACCCCAGTACCAGGCATGTCATCACCCTGGATCTTaGTCACAGCCTGAGACTGTGCACAGGACTTCATGTCCACTCCAG +
Preference number: 5 (lower is better)
Translates to: PCPQPQYQACHHPGS*SQPETVHRTSCPLQ
Trigger: CTGGAGTGGACATGAAGTCCTGTGCACAGTCTCAGGCTGTGACCAAGATCCAGGGTGATGACATGCCTGGTACTGGGGTTGAGGACATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CAA 90 bp ATTATGCGTGGCTTAACCCTAGTTATAGGCCCAGTGGCCAGGATAGGAGGTGCGACCAACTGTTGCAGGTaGGCTTCCCAGGAAGCAGGC +
Preference number: 5 (lower is better)
Translates to: IMRGLTLVIGPVARIGGATNCCR*ASQEAG
Trigger: GCCTGCTTCCTGGGAAGCCAACCTGCAACAGTTGGT...CGCACCTCCTATCCTGGCCACTGGGCCTATAACTAGGGTTAAGCCACGCATAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
ENST00000455331.5
CDS CCA 90 bp CCAGAGCTCTTGTCTTGGTTTCATCCACAATTCCAGTCTTGTTCGTaGCCCCCATCTTGGCCACTTCCCTGGGTACTGCCAAGGTCTCAC +
Preference number: 5 (lower is better)
Translates to: PELLSWFHPQFQSCS*PPSWPLPWVLPRSH
Trigger: GTGAGACCTTGGCAGTACCCAGGGAAGTGGCCAAGATGGGGGCCACGAACAAGACTGGAATTGTGGATGAAACCAAGACAAGAGCTCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000423738.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CAA 90 bp CAAAGCAGTACTAGGAGGTGCCCCAGTGAGTATCCCTGGGCTCTGAGCATTGCTCTTTGGTCTGGGTCATaGCTTCTCTCTTGGCCTCTG +
Preference number: 5 (lower is better)
Translates to: QSSTRRCPSEYPWALSIALWSGS*LLSWPL
Trigger: CAGAGGCCAAGAGAGAAGCAATGACCCAGACCAAAG...AGCAATGCTCAGAGCCCAGGGATACTCACTGGGGCACCTCCTAGTACTGCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433011.5
CDS-3UTR CAA 90 bp ATTATGCGTGGCTTAACCCTAGTTATAGGCCCAGTGGCCAGGATAGGAGGTGCGGTCATTGCTTCTCTCTaGGCCTCTGTCTTGGCAACC +
Preference number: 5 (lower is better)
Translates to: IMRGLTLVIGPVARIGGAVIASL*ASVLAT
Trigger: GGTTGCCAAGACAGAGGCCAAGAGAGAAGCAATGAC...CGCACCTCCTATCCTGGCCACTGGGCCTATAACTAGGGTTAAGCCACGCATAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CAA 90 bp GCTGTTACCCTAGGCCTAAGAGGGCAAGAGGAAGAAATAGTATTTCTGGAGCCTTTCGTGGCCCCCATCTaGGCCACTTCCCTGGGTACT +
Preference number: 5 (lower is better)
Translates to: AVTLGLRGQEEEIVFLEPFVAPI*ATSLGT
Trigger: AGTACCCAGGGAAGTGGCCAAGATGGGGGCCACGAA...AGGCTCCAGAAATACTATTTCTTCCTCTTGCCCTCTTAGGCCTAGGGTAACAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
CDS-3UTR CAA 90 bp TTTGCTTTCTCGAACCACTTCTTGTACCAACTGTTGCAGGTTGGCTTCCCAGGATTCGTGGCCCCCATCTaGGCCACTTCCCTGGGTACT +
Preference number: 5 (lower is better)
Translates to: FAFSNHFLYQLLQVGFPGFVAPI*ATSLGT
Trigger: AGTACCCAGGGAAGTGGCCAAGATGGGGGCCACGAA...TCCTGGGAAGCCAACCTGCAACAGTTGGTACAAGAAGTGGTTCGAGAAAGCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CAA 90 bp CACAAATGCCTCTTAAGGGTACCACCTCCCAACACTGTCACATTGGGAACCCATACCAACTGTTGCAGGTaGGCTTCCCAGGAAGCAGGC +
Preference number: 5 (lower is better)
Translates to: HKCLLRVPPPNTVTLGTHTNCCR*ASQEAG
Trigger: GCCTGCTTCCTGGGAAGCCAACCTGCAACAGTTGGT...ATGGGTTCCCAATGTGACAGTGTTGGGAGGTGGTACCCTTAAGAGGCATTTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
CDS TCA 90 bp TTGGTGTGCAAACTTAGTTTCCGACCAGATCATGGCTCCATCCCATaGCCCCATTCCTGCCCCAGGGACCATGTACGGATATATGCCTCT +
Preference number: 5 (lower is better)
Translates to: LVCKLSFRPDHGSIP*PHSCPRDHVRIYAS
Trigger: AGAGGCATATATCCGTACATGGTCCCTGGGGCAGGAATGGGGTCATGGGATGGAGCCATGATCTGGTCGGAAACTAAGTTTGCACACCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS GCA 90 bp AAAACCAGACACAAGCATAACAGACAGGAGGTAGCAGACACTGAATaGTGGGTGGGCAGCCGAGCTCCCAGACAGCCTTTTCCAATTCAG +
Preference number: 5 (lower is better)
Translates to: KTRHKHNRQEVADTE*WVGSRAPRQPFPIQ
Trigger: CTGAATTGGAAAAGGCTGTCTGGGAGCTCGGCTGCCCACCCAGCATTCAGTGTCTGCTACCTCCTGTCTGTTATGCTTGTGTCTGGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431677.1
CDS-3UTR CAA 90 bp AGTGGCCAGGATAGGAGGTGCGGGCAGATTCTGAGGAAAACCCAGGTTATCTTAGCTATAGCAGTGGCCTaGGTCTCTACTTCAGCCCTA +
Preference number: 5 (lower is better)
Translates to: SGQDRRCGQILRKTQVILAIAVA*VSTSAL
Trigger: TAGGGCTGAAGTAGAGACCAAGGCCACTGCTATAGC...TAAGATAACCTGGGTTTTCCTCAGAATCTGCCCGCACCTCCTATCCTGGCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CAA 90 bp AAAGGGGAAACAGGTACACGCAAAAGACACCAAGCACAAGAGGCAGACTCACTTGCCACTTCCCTGGCTTaGGCCTTGACCTCAGTCAGA +
Preference number: 5 (lower is better)
Translates to: KGETGTRKRHQAQEADSLATSLA*ALTSVR
Trigger: TCTGACTGAGGTCAAGGCCAAAGCCAGGGAAGTGGC...AAGTGAGTCTGCCTCTTGTGCTTGGTGTCTTTTGCGTGTACCTGTTTCCCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
CDS-3UTR CAA 90 bp TTCTTGTACCAACTGTTGCAGGTTGGCTTCCCAGGAAGCAGGCCCAGAGATAGACTTTGGTCTGGGTCATaGCTTCTCTCTTGGCCTCTG +
Preference number: 5 (lower is better)
Translates to: FLYQLLQVGFPGSRPRDRLWSGS*LLSWPL
Trigger: CAGAGGCCAAGAGAGAAGCAATGACCCAGACCAAAG...TCTATCTCTGGGCCTGCTTCCTGGGAAGCCAACCTGCAACAGTTGGTACAAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CAA 90 bp TTCTTGTACCAACTGTTGCAGGTTGGCTTCCCAGGAAGCAGGCCCAGAGATAGATCCACAATTCCAGTCTaGTTCGTGGCCCCCATCTTG +
Preference number: 5 (lower is better)
Translates to: FLYQLLQVGFPGSRPRDRSTIPV*FVAPIL
Trigger: CAAGATGGGGGCCACGAACAAGACTGGAATTGTGGA...TCTATCTCTGGGCCTGCTTCCTGGGAAGCCAACCTGCAACAGTTGGTACAAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CAA 90 bp AGTGGCCAGGATAGGAGGTGCGGGCAGATTCTGAGGAAAACCCAGGTTATCTTATGCCAGGGCATTCCATaGACCAAACCCAAGCAGAAG +
Preference number: 5 (lower is better)
Translates to: SGQDRRCGQILRKTQVILCQGIP*TKPKQK
Trigger: CTTCTGCTTGGGTTTGGTCAATGGAATGCCCTGGCA...TAAGATAACCTGGGTTTTCCTCAGAATCTGCCCGCACCTCCTATCCTGGCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000452188.5
CDS GCA 90 bp TCCAGTCTTGTTCGTGGCCCCCATCTTGGCCACTTCCCTGGGTACTaGCAAGGTCTCACTCTGTGTAACCATTACTCTGTTAATCTCTGT +
Preference number: 5 (lower is better)
Translates to: SSLVRGPHLGHFPGY*QGLTLCNHYSVNLC
Trigger: ACAGAGATTAACAGAGTAATGGTTACACAGAGTGAGACCTTGGCAGTACCCAGGGAAGTGGCCAAGATGGGGGCCACGAACAAGACTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000423738.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CAA 90 bp CCTAGTTATAGGCCCAGTGGCCAGGATAGGAGGTGCGGGCAGATTCTGAGGAAATGCTCCAATCTCGACTaGGGGTTTAGTCTTAATCTC +
Preference number: 5 (lower is better)
Translates to: PSYRPSGQDRRCGQILRKCSNLD*GFSLNL
Trigger: GAGATTAAGACTAAACCCCAAGTCGAGATTGGAGCA...TTTCCTCAGAATCTGCCCGCACCTCCTATCCTGGCCACTGGGCCTATAACTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CAA 90 bp GTTTGCTTTCTCGAACCACTTCTTGTACCAACTGTTGCAGGTTGGCTTCCCAGGGCTATAGCAGTGGCCTaGGTCTCTACTTCAGCCCTA +
Preference number: 5 (lower is better)
Translates to: VCFLEPLLVPTVAGWLPRAIAVA*VSTSAL
Trigger: TAGGGCTGAAGTAGAGACCAAGGCCACTGCTATAGC...CCTGGGAAGCCAACCTGCAACAGTTGGTACAAGAAGTGGTTCGAGAAAGCAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CAA 90 bp TGGAAGATATGTTCTGTTAGTTTTGAGGGCTGGGAAGTTCAAGACTGGGCAGTCGCCACTTCCCTGGCTTaGGCCTTGACCTCAGTCAGA +
Preference number: 5 (lower is better)
Translates to: WKICSVSFEGWEVQDWAVATSLA*ALTSVR
Trigger: TCTGACTGAGGTCAAGGCCAAAGCCAGGGAAGTGGC...GACTGCCCAGTCTTGAACTTCCCAGCCCTCAAAACTAACAGAACATATCTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433011.5
CDS-3UTR CAA 90 bp ATCTTACAGGGGAAAGGATTCCATATATTGAAGCAAGATGGAGTGCCAGCCCTTCTCTTGGCCTCTGTCTaGGCAACCAGCGCCCAAGCT +
Preference number: 5 (lower is better)
Translates to: ILQGKGFHILKQDGVPALLLASV*ATSAQA
Trigger: AGCTTGGGCGCTGGTTGCCAAGACAGAGGCCAAGAG...AAGGGCTGGCACTCCATCTTGCTTCAATATATGGAATCCTTTCCCCTGTAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CAA 90 bp CACAAATGCCTCTTAAGGGTACCACCTCCCAACACTGTCACATTGGGAACCCATTCCACAATTCCAGTCTaGTTCGTGGCCCCCATCTTG +
Preference number: 5 (lower is better)
Translates to: HKCLLRVPPPNTVTLGTHSTIPV*FVAPIL
Trigger: CAAGATGGGGGCCACGAACAAGACTGGAATTGTGGA...ATGGGTTCCCAATGTGACAGTGTTGGGAGGTGGTACCCTTAAGAGGCATTTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
CDS-3UTR CAA 90 bp CACAGTGTTTGCTTTCTCGAACCACTTCTTGTACCAACTGTTGCAGGTTGGCTTACCAACTGTTGCAGGTaGGCTTCCCAGGAAGCAGGC +
Preference number: 5 (lower is better)
Translates to: HSVCFLEPLLVPTVAGWLTNCCR*ASQEAG
Trigger: GCCTGCTTCCTGGGAAGCCAACCTGCAACAGTTGGT...AAGCCAACCTGCAACAGTTGGTACAAGAAGTGGTTCGAGAAAGCAAACACTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CAA 90 bp CAGGGGAAAGGATTCCATATATTGAAGCAAGATGGAGTGCCAGCCCTTAATAGGACCAACTGTTGCAGGTaGGCTTCCCAGGAAGCAGGC +
Preference number: 5 (lower is better)
Translates to: QGKGFHILKQDGVPALNRTNCCR*ASQEAG
Trigger: GCCTGCTTCCTGGGAAGCCAACCTGCAACAGTTGGT...CCTATTAAGGGCTGGCACTCCATCTTGCTTCAATATATGGAATCCTTTCCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CAA 90 bp CCTAGTTATAGGCCCAGTGGCCAGGATAGGAGGTGCGGGCAGATTCTGAGGAAATTCTCGAACCACTTCTaGTACCAACTGTTGCAGGTT +
Preference number: 5 (lower is better)
Translates to: PSYRPSGQDRRCGQILRKFSNHF*YQLLQV
Trigger: AACCTGCAACAGTTGGTACAAGAAGTGGTTCGAGAA...TTTCCTCAGAATCTGCCCGCACCTCCTATCCTGGCCACTGGGCCTATAACTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CAA 90 bp CACAAATGCCTCTTAAGGGTACCACCTCCCAACACTGTCACATTGGGAACCCATTGCCAGGGCATTCCATaGACCAAACCCAAGCAGAAG +
Preference number: 5 (lower is better)
Translates to: HKCLLRVPPPNTVTLGTHCQGIP*TKPKQK
Trigger: CTTCTGCTTGGGTTTGGTCAATGGAATGCCCTGGCA...ATGGGTTCCCAATGTGACAGTGTTGGGAGGTGGTACCCTTAAGAGGCATTTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000452188.5
CDS CCA 90 bp GCCCTAGGCCCACTTCTTGCTCCAGTTTCTGCTCCAATCTCGACTTaGGGTTTAGTCTTAATCTCTGCTTCATTTATGGCCAAGGTCTGG +
Preference number: 5 (lower is better)
Translates to: ALGPLLAPVSAPIST*GLVLISASFMAKVW
Trigger: CCAGACCTTGGCCATAAATGAAGCAGAGATTAAGACTAAACCCCAAGTCGAGATTGGAGCAGAAACTGGAGCAAGAAGTGGGCCTAGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000423738.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS CCA 90 bp GGAATGCTCTTGGGATCAACACAGTCTCTTCCAGAGCTCTTGTCTTaGTTTCATCCACAATTCCAGTCTTGTTCGTGGCCCCCATCTTGG +
Preference number: 5 (lower is better)
Translates to: GMLLGSTQSLPELLS*FHPQFQSCSWPPSW
Trigger: CCAAGATGGGGGCCACGAACAAGACTGGAATTGTGGATGAAACCAAGACAAGAGCTCTGGAAGAGACTGTGTTGATCCCAAGAGCATTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CAA 90 bp TTCTTGTACCAACTGTTGCAGGTTGGCTTCCCAGGAAGCAGGCCCAGAGATAGATATGGGAAGACCTCCTaGATCCAGTGCAGTTTTCTC +
Preference number: 5 (lower is better)
Translates to: FLYQLLQVGFPGSRPRDRYGKTS*IQCSFL
Trigger: GAGAAAACTGCACTGGATCAAGGAGGTCTTCCCATA...TCTATCTCTGGGCCTGCTTCCTGGGAAGCCAACCTGCAACAGTTGGTACAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000445416.5
ENST00000455331.5
CDS-3UTR CAA 90 bp ATGCAGTCCCTGCCAATAAAACATAGCCCAAATCAGAGTGGGAGCAGTGAAGAATCCCTGGCTTTGGCCTaGACCTCAGTCAGAGTCACT +
Preference number: 5 (lower is better)
Translates to: MQSLPIKHSPNQSGSSEESLALA*TSVRVT
Trigger: AGTGACTCTGACTGAGGTCAAGGCCAAAGCCAGGGA...TTCTTCACTGCTCCCACTCTGATTTGGGCTATGTTTTATTGGCAGGGACTGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
CDS-3UTR CAA 90 bp AAAGGGGAAACAGGTACACGCAAAAGACACCAAGCACAAGAGGCAGACTCACTTCTTTGGTCTGGGTCATaGCTTCTCTCTTGGCCTCTG +
Preference number: 5 (lower is better)
Translates to: KGETGTRKRHQAQEADSLLWSGS*LLSWPL
Trigger: CAGAGGCCAAGAGAGAAGCAATGACCCAGACCAAAG...AAGTGAGTCTGCCTCTTGTGCTTGGTGTCTTTTGCGTGTACCTGTTTCCCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
CDS-3UTR CAA 90 bp ATCTTACAGGGGAAAGGATTCCATATATTGAAGCAAGATGGAGTGCCAGCCCTTACCAACTGTTGCAGGTaGGCTTCCCAGGAAGCAGGC +
Preference number: 5 (lower is better)
Translates to: ILQGKGFHILKQDGVPALTNCCR*ASQEAG
Trigger: GCCTGCTTCCTGGGAAGCCAACCTGCAACAGTTGGT...AAGGGCTGGCACTCCATCTTGCTTCAATATATGGAATCCTTTCCCCTGTAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CAA 90 bp TCTTGTACCAACTGTTGCAGGTTGGCTTCCCAGGAAGCAGGCCCAGAGATAGAGTTCTCGAACCACTTCTaGTACCAACTGTTGCAGGTT +
Preference number: 5 (lower is better)
Translates to: SCTNCCRLASQEAGPEIEFSNHF*YQLLQV
Trigger: AACCTGCAACAGTTGGTACAAGAAGTGGTTCGAGAA...CTCTATCTCTGGGCCTGCTTCCTGGGAAGCCAACCTGCAACAGTTGGTACAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CAA 90 bp CCTAGTTATAGGCCCAGTGGCCAGGATAGGAGGTGCGGGCAGATTCTGAGGAAAGAAGATATGTTAGTTTaGAGGGCTGGGAAGTTCAAG +
Preference number: 5 (lower is better)
Translates to: PSYRPSGQDRRCGQILRKEDMLV*RAGKFK
Trigger: CTTGAACTTCCCAGCCCTCAAAACTAACATATCTTC...TTTCCTCAGAATCTGCCCGCACCTCCTATCCTGGCCACTGGGCCTATAACTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354842.4
ENST00000442270.5
ENST00000452188.5
CDS-3UTR CAA 90 bp CATCAATCCAGATGTCCCCCATTCCAAGTGTCAGAGTCCCATTCCTTCTTAACCTGCCAGGGCATTCCATaGACCAAACCCAAGCAGAAG +
Preference number: 5 (lower is better)
Translates to: HQSRCPPFQVSESHSFLTCQGIP*TKPKQK
Trigger: CTTCTGCTTGGGTTTGGTCAATGGAATGCCCTGGCA...GGTTAAGAAGGAATGGGACTCTGACACTTGGAATGGGGGACATCTGGATTGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000452188.5
CDS-3UTR CAA 90 bp CACAGTGTTTGCTTTCTCGAACCACTTCTTGTACCAACTGTTGCAGGTTGGCTTATGGTGCTGTCACGGTaGGTGAGCTGTCTGTCCTTG +
Preference number: 5 (lower is better)
Translates to: HSVCFLEPLLVPTVAGWLMVLSR*VSCLSL
Trigger: CAAGGACAGACAGCTCACCAACCGTGACAGCACCAT...AAGCCAACCTGCAACAGTTGGTACAAGAAGTGGTTCGAGAAAGCAAACACTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433011.5
CDS TCA 90 bp TCATCAGCCCAGGACACGCTATTTTCCCAGTCTCCATCCATGGTCTaGAACCTAAATTTGATCCACCGCTCAGCAGCAATCCAGTCTTCA +
Preference number: 5 (lower is better)
Translates to: SSAQDTLFSQSPSMV*NLNLIHRSAAIQSS
Trigger: TGAAGACTGGATTGCTGCTGAGCGGTGGATCAAATTTAGGTTTCAGACCATGGATGGAGACTGGGAAAATAGCGTGTCCTGGGCTGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS GCA 90 bp TATAGCAGTGGCCTTGGTCTCTACTTCAGCCCTAGGCCCACTTCTTaGTCCAGTTTCTGCTCCAATCTCGACTTGGGGTTTAGTCTTAAT +
Preference number: 5 (lower is better)
Translates to: YSSGLGLYFSPRPTS*SSFCSNLDLGFSLN
Trigger: ATTAAGACTAAACCCCAAGTCGAGATTGGAGCAGAAACTGGAGCAAGAAGTGGGCCTAGGGCTGAAGTAGAGACCAAGGCCACTGCTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000423738.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS GCA 90 bp TGTCTTGGCAACCAGCGCCCAAGCTTTAGCCTTGGTCTGTGTCACTaGTTCTTTCTTAACTATTTTGCCAGCCTCAGCATCAGTTTGGGT +
Preference number: 5 (lower is better)
Translates to: CLGNQRPSFSLGLCH*FFLNYFASLSISLG
Trigger: ACCCAAACTGATGCTGAGGCTGGCAAAATAGTTAAGAAAGAAGCAGTGACACAGACCAAGGCTAAAGCTTGGGCGCTGGTTGCCAAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000423738.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CAA 90 bp TCTGAGGAAAACCCAGGTTATCTTACAGGGGAAAGGATTCCATATATTGAAGCACTCTTGGCCTCTGTCTaGGCAACCAGCGCCCAAGCT +
Preference number: 5 (lower is better)
Translates to: SEENPGYLTGERIPYIEALLASV*ATSAQA
Trigger: AGCTTGGGCGCTGGTTGCCAAGACAGAGGCCAAGAG...TGCTTCAATATATGGAATCCTTTCCCCTGTAAGATAACCTGGGTTTTCCTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CAA 90 bp GAAAACCCAGGTTATCTTACAGGGGAAAGGATTCCATATATTGAAGCAAGATGGTTCGTGGCCCCCATCTaGGCCACTTCCCTGGGTACT +
Preference number: 5 (lower is better)
Translates to: ENPGYLTGERIPYIEARWFVAPI*ATSLGT
Trigger: AGTACCCAGGGAAGTGGCCAAGATGGGGGCCACGAA...CCATCTTGCTTCAATATATGGAATCCTTTCCCCTGTAAGATAACCTGGGTTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CAA 90 bp TTCTTGTACCAACTGTTGCAGGTTGGCTTCCCAGGAAGCAGGCCCAGAGATAGATCCAGAGCTCTTGTCTaGGTTTCATCCACAATTCCA +
Preference number: 5 (lower is better)
Translates to: FLYQLLQVGFPGSRPRDRSRALV*VSSTIP
Trigger: TGGAATTGTGGATGAAACCAAGACAAGAGCTCTGGA...TCTATCTCTGGGCCTGCTTCCTGGGAAGCCAACCTGCAACAGTTGGTACAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CAA 90 bp AGTGGCCAGGATAGGAGGTGCGGGCAGATTCTGAGGAAAACCCAGGTTATCTTATCTCTTCCAGAGCTCTaGTCTTGGTTTCATCCACAA +
Preference number: 5 (lower is better)
Translates to: SGQDRRCGQILRKTQVILSLPEL*SWFHPQ
Trigger: TTGTGGATGAAACCAAGACAAGAGCTCTGGAAGAGA...TAAGATAACCTGGGTTTTCCTCAGAATCTGCCCGCACCTCCTATCCTGGCCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CAA 90 bp ATTAAGGCATTCTGGAAGTCCATGGAGATGGTGATGACAGAATCATTGTCAGCAACCAACTGTTGCAGGTaGGCTTCCCAGGAAGCAGGC +
Preference number: 5 (lower is better)
Translates to: IKAFWKSMEMVMTESLSATNCCR*ASQEAG
Trigger: GCCTGCTTCCTGGGAAGCCAACCTGCAACAGTTGGT...TGCTGACAATGATTCTGTCATCACCATCTCCATGGACTTCCAGAATGCCTTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000452188.5
CDS-3UTR CAA 90 bp CACAAATGCCTCTTAAGGGTACCACCTCCCAACACTGTCACATTGGGAACCCATCTCCTCTTGCTTCTCTaGGCAGTACACCCTAAAGTA +
Preference number: 5 (lower is better)
Translates to: HKCLLRVPPPNTVTLGTHLLLLL*AVHPKV
Trigger: TACTTTAGGGTGTACTGCCAAGAGAAGCAAGAGGAG...ATGGGTTCCCAATGTGACAGTGTTGGGAGGTGGTACCCTTAAGAGGCATTTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433011.5
ENST00000452188.5
CDS-3UTR CAA 90 bp TTCTTGTACCAACTGTTGCAGGTTGGCTTCCCAGGAAGCAGGCCCAGAGATAGAAAGACACTAACCTCCTaGATCCAGTGCAGTTTTCTC +
Preference number: 5 (lower is better)
Translates to: FLYQLLQVGFPGSRPRDRKTLTS*IQCSFL
Trigger: GAGAAAACTGCACTGGATCAAGGAGGTTAGTGTCTT...TCTATCTCTGGGCCTGCTTCCTGGGAAGCCAACCTGCAACAGTTGGTACAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442270.5
ENST00000452188.5
CDS TCA 90 bp ACCAAGACCCTATATCAACTCCACCAGCAGCCTCAAACTTATCCTTaGTGCTGGTGTTATCCCCAGCTCCAGACTCAAAACTGGCATCTT +
Preference number: 5 (lower is better)
Translates to: TKTLYQLHQQPQTYP*CWCYPQLQTQNWHL
Trigger: AAGATGCCAGTTTTGAGTCTGGAGCTGGGGATAACACCAGCATCAAGGATAAGTTTGAGGCTGCTGGTGGAGTTGATATAGGGTCTTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS GCA 90 bp CTTGGTCTCTACTTCAGCCCTAGGCCCACTTCTTGCTCCAGTTTCTaGTCCAATCTCGACTTGGGGTTTAGTCTTAATCTCTGCTTCATT +
Preference number: 5 (lower is better)
Translates to: LGLYFSPRPTSCSSF*SNLDLGFSLNLCFI
Trigger: AATGAAGCAGAGATTAAGACTAAACCCCAAGTCGAGATTGGAGCAGAAACTGGAGCAAGAAGTGGGCCTAGGGCTGAAGTAGAGACCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000423738.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS GCA 90 bp CTCTTTTTCAGCCAATATATGAGTTTCAGCTTTGGTCTGGGTCATTaGTTCTCTCTTGGCCTCTGTCTTGGCAACCAGCGCCCAAGCTTT +
Preference number: 5 (lower is better)
Translates to: LFFSQYMSFSFGLGH*FSLGLCLGNQRPSF
Trigger: AAAGCTTGGGCGCTGGTTGCCAAGACAGAGGCCAAGAGAGAAGCAATGACCCAGACCAAAGCTGAAACTCATATATTGGCTGAAAAAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000423738.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS CCA 90 bp GTTTGTTTTCTGGACTCATCTTCAACTGGGAAGCTGGCCTCACTTTaGTGTGCAAACTTAGTTTCCGACCAGATCATGGCTCCATCCCAT +
Preference number: 5 (lower is better)
Translates to: VCFLDSSSTGKLASL*CANLVSDQIMAPSH
Trigger: ATGGGATGGAGCCATGATCTGGTCGGAAACTAAGTTTGCACACCAAAGTGAGGCCAGCTTCCCAGTTGAAGATGAGTCCAGAAAACAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CAA 90 bp GAGTTCGTGTCATTTCCTGTGGTTTTCTCCAGGGTATTAAATCCTGTATTCTGGTCCCTGGCTTTGGCCTaGACCTCAGTCAGAGTCACT +
Preference number: 5 (lower is better)
Translates to: EFVSFPVVFSRVLNPVFWSLALA*TSVRVT
Trigger: AGTGACTCTGACTGAGGTCAAGGCCAAAGCCAGGGA...CCAGAATACAGGATTTAATACCCTGGAGAAAACCACAGGAAATGACACGAACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
CDS-3UTR CAA 90 bp GAAGTCCATGGAGATGGTGATGACAGAATCATTGTCAGCAAAGAAGGTAAATGTGCCACTTCCCTGGCTTaGGCCTTGACCTCAGTCAGA +
Preference number: 5 (lower is better)
Translates to: EVHGDGDDRIIVSKEGKCATSLA*ALTSVR
Trigger: TCTGACTGAGGTCAAGGCCAAAGCCAGGGAAGTGGC...ACATTTACCTTCTTTGCTGACAATGATTCTGTCATCACCATCTCCATGGACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
CDS-3UTR CAA 90 bp GATTCTGAGGAAAACCCAGGTTATCTTACAGGGGAAAGGATTCCATATATTGAACTCTTGGCCTCTGTCTaGGCAACCAGCGCCCAAGCT +
Preference number: 5 (lower is better)
Translates to: DSEENPGYLTGERIPYIELLASV*ATSAQA
Trigger: AGCTTGGGCGCTGGTTGCCAAGACAGAGGCCAAGAG...TTCAATATATGGAATCCTTTCCCCTGTAAGATAACCTGGGTTTTCCTCAGAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CAA 90 bp TTATGTCTCTCTGAGTCTTTGATCCCTTTTCCCGCCATCTTCTATGGCAACTCTGTCATTGCTTCTCTCTaGGCCTCTGTCTTGGCAACC +
Preference number: 5 (lower is better)
Translates to: LCLSESLIPFPAIFYGNSVIASL*ASVLAT
Trigger: GGTTGCCAAGACAGAGGCCAAGAGAGAAGCAATGAC...AGAGTTGCCATAGAAGATGGCGGGAAAAGGGATCAAAGACTCAGAGAGACATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
CDS-3UTR CAA 90 bp AGCTACTGGAAGATATGTTCTGTTAGTTTTGAGGGCTGGGAAGTTCAAGACTGGGTCATTGCTTCTCTCTaGGCCTCTGTCTTGGCAACC +
Preference number: 5 (lower is better)
Translates to: SYWKICSVSFEGWEVQDWVIASL*ASVLAT
Trigger: GGTTGCCAAGACAGAGGCCAAGAGAGAAGCAATGAC...CCAGTCTTGAACTTCCCAGCCCTCAAAACTAACAGAACATATCTTCCAGTAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433011.5
CDS-3UTR CAA 90 bp ATCTTACAGGGGAAAGGATTCCATATATTGAAGCAAGATGGAGTGCCAGCCCTTCTTTGGTCTGGGTCATaGCTTCTCTCTTGGCCTCTG +
Preference number: 5 (lower is better)
Translates to: ILQGKGFHILKQDGVPALLWSGS*LLSWPL
Trigger: CAGAGGCCAAGAGAGAAGCAATGACCCAGACCAAAG...AAGGGCTGGCACTCCATCTTGCTTCAATATATGGAATCCTTTCCCCTGTAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CAA 90 bp GATTCTGAGGAAAACCCAGGTTATCTTACAGGGGAAAGGATTCCATATATTGAATTCGTGGCCCCCATCTaGGCCACTTCCCTGGGTACT +
Preference number: 5 (lower is better)
Translates to: DSEENPGYLTGERIPYIEFVAPI*ATSLGT
Trigger: AGTACCCAGGGAAGTGGCCAAGATGGGGGCCACGAA...TTCAATATATGGAATCCTTTCCCCTGTAAGATAACCTGGGTTTTCCTCAGAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CAA 90 bp ATGCAGTCCCTGCCAATAAAACATAGCCCAAATCAGAGTGGGAGCAGTGAAGAATGTCTCTCTGAGTCTTaGATCCCTTTTCCCGCCATC +
Preference number: 5 (lower is better)
Translates to: MQSLPIKHSPNQSGSSEECLSES*IPFPAI
Trigger: GATGGCGGGAAAAGGGATCAAAGACTCAGAGAGACA...TTCTTCACTGCTCCCACTCTGATTTGGGCTATGTTTTATTGGCAGGGACTGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000452188.5
CDS-3UTR CAA 90 bp CAGGGGAAAGGATTCCATATATTGAAGCAAGATGGAGTGCCAGCCCTTAATAGGTGTCTCTCTGAGTCTTaGATCCCTTTTCCCGCCATC +
Preference number: 5 (lower is better)
Translates to: QGKGFHILKQDGVPALNRCLSES*IPFPAI
Trigger: GATGGCGGGAAAAGGGATCAAAGACTCAGAGAGACA...CCTATTAAGGGCTGGCACTCCATCTTGCTTCAATATATGGAATCCTTTCCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
CDS-3UTR CAA 90 bp CACAAATGCCTCTTAAGGGTACCACCTCCCAACACTGTCACATTGGGAACCCATTCATCATCTTCTCTGTaGTCAGGTTGGGCACTTAGT +
Preference number: 5 (lower is better)
Translates to: HKCLLRVPPPNTVTLGTHSSSSL*SGWALS
Trigger: ACTAAGTGCCCAACCTGACAACAGAGAAGATGATGA...ATGGGTTCCCAATGTGACAGTGTTGGGAGGTGGTACCCTTAAGAGGCATTTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000452188.5
CDS-3UTR CAA 90 bp TCTTGTACCAACTGTTGCAGGTTGGCTTCCCAGGAAGCAGGCCCAGAGATAGAGATGCTAAAATCTCAGTaGGAAATGCAGAAATCACCC +
Preference number: 5 (lower is better)
Translates to: SCTNCCRLASQEAGPEIEMLKSQ*EMQKSP
Trigger: GGGTGATTTCTGCATTTCCAACTGAGATTTTAGCAT...CTCTATCTCTGGGCCTGCTTCCTGGGAAGCCAACCTGCAACAGTTGGTACAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433011.5
ENST00000442270.5
CDS CCA 90 bp ACTTGGGGTTTAGTCTTAATCTCTGCTTCATTTATGGCCAAGGTCTaGCTCTGTACCCCAACCACAGTCTCCATCTTAACTGTGGATCCA +
Preference number: 5 (lower is better)
Translates to: TWGLVLISASFMAKV*LCTPTTVSILTVDP
Trigger: TGGATCCACAGTTAAGATGGAGACTGTGGTTGGGGTACAGAGCCAGACCTTGGCCATAAATGAAGCAGAGATTAAGACTAAACCCCAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000423738.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CAA 90 bp CAGGGGAAAGGATTCCATATATTGAAGCAAGATGGAGTGCCAGCCCTTAATAGGTATGGGAAGACCTCCTaGATCCAGTGCAGTTTTCTC +
Preference number: 5 (lower is better)
Translates to: QGKGFHILKQDGVPALNRYGKTS*IQCSFL
Trigger: GAGAAAACTGCACTGGATCAAGGAGGTCTTCCCATA...CCTATTAAGGGCTGGCACTCCATCTTGCTTCAATATATGGAATCCTTTCCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000445416.5
ENST00000455331.5
CDS-3UTR CAA 90 bp TTGATCCCTTTTCCCGCCATCTTCTATGGCAACTCTGGCATTTACACCTCACTTCTCCATGCTTCTAGATaGATCTCCTCCTCTTTCCCT +
Preference number: 5 (lower is better)
Translates to: LIPFPAIFYGNSGIYTSLLHASR*ISSSFP
Trigger: AGGGAAAGAGGAGGAGATCAATCTAGAAGCATGGAG...AAGTGAGGTGTAAATGCCAGAGTTGCCATAGAAGATGGCGGGAAAAGGGATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
CDS-3UTR CAA 90 bp GAAAACCCAGGTTATCTTACAGGGGAAAGGATTCCATATATTGAAGCAAGATGGTCCCTGGCTTTGGCCTaGACCTCAGTCAGAGTCACT +
Preference number: 5 (lower is better)
Translates to: ENPGYLTGERIPYIEARWSLALA*TSVRVT
Trigger: AGTGACTCTGACTGAGGTCAAGGCCAAAGCCAGGGA...CCATCTTGCTTCAATATATGGAATCCTTTCCCCTGTAAGATAACCTGGGTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CAA 90 bp TCCAAAATTTCATCACAGTGTTTGCTTTCTCGAACCACTTCTTGTACCAACTGTGCCACTTCCCTGGCTTaGGCCTTGACCTCAGTCAGA +
Preference number: 5 (lower is better)
Translates to: SKISSQCLLSRTTSCTNCATSLA*ALTSVR
Trigger: TCTGACTGAGGTCAAGGCCAAAGCCAGGGAAGTGGC...ACAGTTGGTACAAGAAGTGGTTCGAGAAAGCAAACACTGTGATGAAATTTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CAA 90 bp TTCTTGTACCAACTGTTGCAGGTTGGCTTCCCAGGAAGCAGGCCCAGAGATAGATCTTTCTTAACTATTTaGCCAGCCTCAGCATCAGTT +
Preference number: 5 (lower is better)
Translates to: FLYQLLQVGFPGSRPRDRSFLTI*PASASV
Trigger: AACTGATGCTGAGGCTGGCAAAATAGTTAAGAAAGA...TCTATCTCTGGGCCTGCTTCCTGGGAAGCCAACCTGCAACAGTTGGTACAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CAA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGCTCTTGGCCTCTGTCTaGGCAACCAGCGCCCAAGCT +
Preference number: 5 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKLLASV*ATSAQA
Trigger: AGCTTGGGCGCTGGTTGCCAAGACAGAGGCCAAGAG...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CAA 90 bp TTGCTTTTAACAAATCCTGAGTCTACTCCTCAGATTTCTCCACCTTCTACCACCGTCATTGCTTCTCTCTaGGCCTCTGTCTTGGCAACC +
Preference number: 5 (lower is better)
Translates to: LLLTNPESTPQISPPSTTVIASL*ASVLAT
Trigger: GGTTGCCAAGACAGAGGCCAAGAGAGAAGCAATGAC...GGTGGTAGAAGGTGGAGAAATCTGAGGAGTAGACTCAGGATTTGTTAAAAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455331.5
CDS-3UTR CAA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGTTCGTGGCCCCCATCTaGGCCACTTCCCTGGGTACT +
Preference number: 5 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKFVAPI*ATSLGT
Trigger: AGTACCCAGGGAAGTGGCCAAGATGGGGGCCACGAA...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CAA 90 bp CATCAATCCAGATGTCCCCCATTCCAAGTGTCAGAGTCCCATTCCTTCTTAACCTCCAGAGCTCTTGTCTaGGTTTCATCCACAATTCCA +
Preference number: 5 (lower is better)
Translates to: HQSRCPPFQVSESHSFLTSRALV*VSSTIP
Trigger: TGGAATTGTGGATGAAACCAAGACAAGAGCTCTGGA...GGTTAAGAAGGAATGGGACTCTGACACTTGGAATGGGGGACATCTGGATTGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CAA 90 bp AGCACAAGAACTCTCCCACTCCAAAGAGACTGCATTCATACCCTCATCAGGAGATTCTCGAACCACTTCTaGTACCAACTGTTGCAGGTT +
Preference number: 5 (lower is better)
Translates to: STRTLPLQRDCIHTLIRRFSNHF*YQLLQV
Trigger: AACCTGCAACAGTTGGTACAAGAAGTGGTTCGAGAA...TCTCCTGATGAGGGTATGAATGCAGTCTCTTTGGAGTGGGAGAGTTCTTGTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
CDS-3UTR CAA 90 bp TTGGAAATGCAGAAATCACCCGTCTTCTGCAACGATCACACTGGAAGCTGTAGAGCATCTATTGCAATCTaGTCGTACAGTACTCCCAGG +
Preference number: 5 (lower is better)
Translates to: LEMQKSPVFCNDHTGSCRASIAI*SYSTPR
Trigger: CCTGGGAGTACTGTACGACAAGATTGCAATAGATGC...TCTACAGCTTCCAGTGTGATCGTTGCAGAAGACGGGTGATTTCTGCATTTCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433011.5
CDS-3UTR CAA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGGCTGGGCAGAGTCTGTaGTACCTTCTCCAGCCCCCA +
Preference number: 5 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKAGQSL*YLLQPP
Trigger: TGGGGGCTGGAGAAGGTACAACAGACTCTGCCCAGC...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CAA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGGCTGGGCAGTGCCCATaGCACCTTCCCCAACTTCTG +
Preference number: 5 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKAGQCP*HLPQLL
Trigger: CAGAAGTTGGGGAAGGTGCAATGGGCACTGCCCAGC...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CAA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGGCTGGACAGAGCCTGTaGCACCCATCCCAGCTTCTG +
Preference number: 5 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKAGQSL*HPSQLL
Trigger: CAGAAGCTGGGATGGGTGCAACAGGCTCTGTCCAGC...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CAA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGAGACCCTCCACTGGCTaGGTCTGCAGTGTCAGCCCA +
Preference number: 5 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKRPSTG*VCSVSP
Trigger: TGGGCTGACACTGCAGACCAAGCCAGTGGAGGGTCT...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CAA 90 bp GAAGAATCCATTCAGTTTCTGCTCATGAAGCATACTAAAAATATCTCAATCCAGGGATTCTCCACTGGCTaGGCTCCCAGCACCAGCCCA +
Preference number: 5 (lower is better)
Translates to: EESIQFLLMKHTKNISIQGFSTG*APSTSP
Trigger: TGGGCTGGTGCTGGGAGCCAAGCCAGTGGAGAATCC...CTGGATTGAGATATTTTTAGTATGCTTCATGAGCAGAAACTGAATGGATTCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CAA 90 bp TACCACCTCCCAACACTGTCACATTGGGAACCCATCCTCAACATGACTTTGGATAAGACACTAACCTCCTaGATCCAGTGCAGTTTTCTC +
Preference number: 5 (lower is better)
Translates to: YHLPTLSHWEPILNMTLDKTLTS*IQCSFL
Trigger: GAGAAAACTGCACTGGATCAAGGAGGTTAGTGTCTT...ATCCAAAGTCATGTTGAGGATGGGTTCCCAATGTGACAGTGTTGGGAGGTGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442270.5
ENST00000452188.5
CDS-3UTR CAA 90 bp AGCTACTGGAAGATATGTTCTGTTAGTTTTGAGGGCTGGGAAGTTCAAGACTGGTATGGGAAGACCTCCTaGATCCAGTGCAGTTTTCTC +
Preference number: 5 (lower is better)
Translates to: SYWKICSVSFEGWEVQDWYGKTS*IQCSFL
Trigger: GAGAAAACTGCACTGGATCAAGGAGGTCTTCCCATA...CCAGTCTTGAACTTCCCAGCCCTCAAAACTAACAGAACATATCTTCCAGTAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433011.5
ENST00000445416.5
CDS-3UTR CAA 90 bp ATGATGATTAAGGCATTCTGGAAGTCCATGGAGATGGTGATGACAGAATCATTGGCTATAGCAGTGGCCTaGGTCTCTACTTCAGCCCTA +
Preference number: 5 (lower is better)
Translates to: MMIKAFWKSMEMVMTESLAIAVA*VSTSAL
Trigger: TAGGGCTGAAGTAGAGACCAAGGCCACTGCTATAGC...CAATGATTCTGTCATCACCATCTCCATGGACTTCCAGAATGCCTTAATCATCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
CDS-3UTR CAA 90 bp CAGGGGAAAGGATTCCATATATTGAAGCAAGATGGAGTGCCAGCCCTTAATAGGTTCTCGAACCACTTCTaGTACCAACTGTTGCAGGTT +
Preference number: 5 (lower is better)
Translates to: QGKGFHILKQDGVPALNRFSNHF*YQLLQV
Trigger: AACCTGCAACAGTTGGTACAAGAAGTGGTTCGAGAA...CCTATTAAGGGCTGGCACTCCATCTTGCTTCAATATATGGAATCCTTTCCCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CAA 90 bp AAATGCCTCTTAAGGGTACCACCTCCCAACACTGTCACATTGGGAACCCATCCTAAAGGATTCCATATATaGAAGCAAGATGGAGTGCCA +
Preference number: 5 (lower is better)
Translates to: KCLLRVPPPNTVTLGTHPKGFHI*KQDGVP
Trigger: TGGCACTCCATCTTGCTTCAATATATGGAATCCTTT...AGGATGGGTTCCCAATGTGACAGTGTTGGGAGGTGGTACCCTTAAGAGGCATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
CDS-3UTR CAA 90 bp ATTAAGGCATTCTGGAAGTCCATGGAGATGGTGATGACAGAATCATTGTCAGCATGTCTCTCTGAGTCTTaGATCCCTTTTCCCGCCATC +
Preference number: 5 (lower is better)
Translates to: IKAFWKSMEMVMTESLSACLSES*IPFPAI
Trigger: GATGGCGGGAAAAGGGATCAAAGACTCAGAGAGACA...TGCTGACAATGATTCTGTCATCACCATCTCCATGGACTTCCAGAATGCCTTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000452188.5
CDS-3UTR CAA 90 bp GCTACTGGAAGATATGTTAGTTTTGAGGGCTGGGAAGTTCAAGACTGGGCAGTCTCTCAGAAGTGTGCTTaGCATATACACTTTCTCAGG +
Preference number: 5 (lower is better)
Translates to: ATGRYVSFEGWEVQDWAVSQKCA*HIHFLR
Trigger: CCTGAGAAAGTGTATATGCAAAGCACACTTCTGAGA...GACTGCCCAGTCTTGAACTTCCCAGCCCTCAAAACTAACATATCTTCCAGTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354842.4
ENST00000442270.5
ENST00000452188.5
CDS-3UTR CAA 90 bp ATGCAGTCCCTGCCAATAAAACATAGCCCAAATCAGAGTGGGAGCAGTGAAGAATCATCATCTTCTCTGTaGTCAGGTTGGGCACTTAGT +
Preference number: 5 (lower is better)
Translates to: MQSLPIKHSPNQSGSSEESSSSL*SGWALS
Trigger: ACTAAGTGCCCAACCTGACAACAGAGAAGATGATGA...TTCTTCACTGCTCCCACTCTGATTTGGGCTATGTTTTATTGGCAGGGACTGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000452188.5
CDS-3UTR CAA 90 bp GAAGTCCATGGAGATGGTGATGACAGAATCATTGTCAGCAAAGAAGGTAAATGTTGCCAGGGCATTCCATaGACCAAACCCAAGCAGAAG +
Preference number: 5 (lower is better)
Translates to: EVHGDGDDRIIVSKEGKCCQGIP*TKPKQK
Trigger: CTTCTGCTTGGGTTTGGTCAATGGAATGCCCTGGCA...ACATTTACCTTCTTTGCTGACAATGATTCTGTCATCACCATCTCCATGGACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000452188.5
CDS-3UTR CAA 90 bp TCAGCTTTTTGTTATTCTTTTCCAGAGCTCAATCTGCTTAGCAACAGCCGCCCACTCCTCTTGCTTCTCTaGGCAGTACACCCTAAAGTA +
Preference number: 5 (lower is better)
Translates to: SAFCYSFPELNLLSNSRPLLLLL*AVHPKV
Trigger: TACTTTAGGGTGTACTGCCAAGAGAAGCAAGAGGAG...TGGGCGGCTGTTGCTAAGCAGATTGAGCTCTGGAAAAGAATAACAAAAAGCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433011.5
ENST00000452188.5
CDS-3UTR CAA 90 bp TTTGCTTTCTCGAACCACTTCTTGTACCAACTGTTGCAGGTTGGCTTCCCAGGATATGTTCTGTTAGTTTaGAGGGCTGGGAAGTTCAAG +
Preference number: 5 (lower is better)
Translates to: FAFSNHFLYQLLQVGFPGYVLLV*RAGKFK
Trigger: CTTGAACTTCCCAGCCCTCAAAACTAACAGAACATA...TCCTGGGAAGCCAACCTGCAACAGTTGGTACAAGAAGTGGTTCGAGAAAGCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433011.5
ENST00000445416.5
CDS-3UTR CAA 90 bp GAAGAATCCATTCAGTTTCTGCTCATGAAGCATACTAAAAATATCTCAATCCAGCCCCGGCATCAATCTTaGCCCCAGGAATGGCCTCAG +
Preference number: 5 (lower is better)
Translates to: EESIQFLLMKHTKNISIQPRHQS*PQEWPQ
Trigger: CTGAGGCCATTCCTGGGGCAAAGATTGATGCCGGGG...CTGGATTGAGATATTTTTAGTATGCTTCATGAGCAGAAACTGAATGGATTCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CAA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGGCTCTGGGCCATACCTaGAGCCTTCATATCCACCCC +
Preference number: 5 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKALGHT*SLHIHP
Trigger: GGGGTGGATATGAAGGCTCAAGGTATGGCCCAGAGC...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CAA 90 bp GAAGAATCCATTCAGTTTCTGCTCATGAAGCATACTAAAAATATCTCAATCCAGGCCGGGCAGAGTCTGTaGTATATGGCCCAACCCCTG +
Preference number: 5 (lower is better)
Translates to: EESIQFLLMKHTKNISIQAGQSL*YMAQPL
Trigger: CAGGGGTTGGGCCATATACAACAGACTCTGCCCGGC...CTGGATTGAGATATTTTTAGTATGCTTCATGAGCAGAAACTGAATGGATTCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CAA 90 bp TTGCTTTTAACAAATCCTGAGTCTACTCCTCAGATTTCTCCACCTTCTACCACCTATGGGAAGACCTCCTaGATCCAGTGCAGTTTTCTC +
Preference number: 5 (lower is better)
Translates to: LLLTNPESTPQISPPSTTYGKTS*IQCSFL
Trigger: GAGAAAACTGCACTGGATCAAGGAGGTCTTCCCATA...GGTGGTAGAAGGTGGAGAAATCTGAGGAGTAGACTCAGGATTTGTTAAAAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455331.5
CDS-3UTR CAA 90 bp TTATGTCTCTCTGAGTCTTTGATCCCTTTTCCCGCCATCTTCTATGGCAACTCTTGCTCCAATCTCGACTaGGGGTTTAGTCTTAATCTC +
Preference number: 5 (lower is better)
Translates to: LCLSESLIPFPAIFYGNSCSNLD*GFSLNL
Trigger: GAGATTAAGACTAAACCCCAAGTCGAGATTGGAGCA...AGAGTTGCCATAGAAGATGGCGGGAAAAGGGATCAAAGACTCAGAGAGACATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
CDS-3UTR CAA 90 bp TCCAAAATTTCATCACAGTGTTTGCTTTCTCGAACCACTTCTTGTACCAACTGTGCTATAGCAGTGGCCTaGGTCTCTACTTCAGCCCTA +
Preference number: 5 (lower is better)
Translates to: SKISSQCLLSRTTSCTNCAIAVA*VSTSAL
Trigger: TAGGGCTGAAGTAGAGACCAAGGCCACTGCTATAGC...ACAGTTGGTACAAGAAGTGGTTCGAGAAAGCAAACACTGTGATGAAATTTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CAA 90 bp ATTCATCTCCAAAATTTCATCACAGTGTTTGCTTTCTCGAACCACTTCTTGTACTCCCTGGCTTTGGCCTaGACCTCAGTCAGAGTCACT +
Preference number: 5 (lower is better)
Translates to: IHLQNFITVFAFSNHFLYSLALA*TSVRVT
Trigger: AGTGACTCTGACTGAGGTCAAGGCCAAAGCCAGGGA...GTACAAGAAGTGGTTCGAGAAAGCAAACACTGTGATGAAATTTTGGAGATGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CAA 90 bp GAAGAATCCATTCAGTTTCTGCTCATGAAGCATACTAAAAATATCTCAATCCAGGCCACTTCCCTGGCTTaGGCCTTGACCTCAGTCAGA +
Preference number: 5 (lower is better)
Translates to: EESIQFLLMKHTKNISIQATSLA*ALTSVR
Trigger: TCTGACTGAGGTCAAGGCCAAAGCCAGGGAAGTGGC...CTGGATTGAGATATTTTTAGTATGCTTCATGAGCAGAAACTGAATGGATTCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CAA 90 bp CCATGGCACATAACTCGGCATAGAAGACTTGTCTTGGTTAGAATTTTAACTTTCTCCACAATTCCAGTCTaGTTCGTGGCCCCCATCTTG +
Preference number: 5 (lower is better)
Translates to: PWHITRHRRLVLVRILTFSTIPV*FVAPIL
Trigger: CAAGATGGGGGCCACGAACAAGACTGGAATTGTGGA...GAAAGTTAAAATTCTAACCAAGACAAGTCTTCTATGCCGAGTTATGTGCCATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CAA 90 bp CATTCCATTGACCAAACCCAAGCAGAAGTCAATTACAAATGGAGTCTGGGGGATTCCAGAGCTCTTGTCTaGGTTTCATCCACAATTCCA +
Preference number: 5 (lower is better)
Translates to: HSIDQTQAEVNYKWSLGDSRALV*VSSTIP
Trigger: TGGAATTGTGGATGAAACCAAGACAAGAGCTCTGGA...ATCCCCCAGACTCCATTTGTAATTGACTTCTGCTTGGGTTTGGTCAATGGAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
CDS-3UTR CAA 90 bp ATCTTACAGGGGAAAGGATTCCATATATTGAAGCAAGATGGAGTGCCAGCCCTTTCTCTTCCAGAGCTCTaGTCTTGGTTTCATCCACAA +
Preference number: 5 (lower is better)
Translates to: ILQGKGFHILKQDGVPALSLPEL*SWFHPQ
Trigger: TTGTGGATGAAACCAAGACAAGAGCTCTGGAAGAGA...AAGGGCTGGCACTCCATCTTGCTTCAATATATGGAATCCTTTCCCCTGTAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CAA 90 bp AAAGGGGAAACAGGTACACGCAAAAGACACCAAGCACAAGAGGCAGACTCACTTTCCCGAAACTCTTTGTaGGTGTATTCTCTTTCTTTC +
Preference number: 5 (lower is better)
Translates to: KGETGTRKRHQAQEADSLSRNSL*VYSLSF
Trigger: GAAAGAAAGAGAATACACCAACAAAGAGTTTCGGGA...AAGTGAGTCTGCCTCTTGTGCTTGGTGTCTTTTGCGTGTACCTGTTTCCCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
CDS-3UTR CAA 90 bp TTTGCTTTCTCGAACCACTTCTTGTACCAACTGTTGCAGGTTGGCTTCCCAGGATCCCGAAACTCTTTGTaGGTGTATTCTCTTTCTTTC +
Preference number: 5 (lower is better)
Translates to: FAFSNHFLYQLLQVGFPGSRNSL*VYSLSF
Trigger: GAAAGAAAGAGAATACACCAACAAAGAGTTTCGGGA...TCCTGGGAAGCCAACCTGCAACAGTTGGTACAAGAAGTGGTTCGAGAAAGCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
CDS-3UTR CAA 90 bp TCTGAGGAAAACCCAGGTTATCTTACAGGGGAAAGGATTCCATATATTGAAGCATGTCTCTCTGAGTCTTaGATCCCTTTTCCCGCCATC +
Preference number: 5 (lower is better)
Translates to: SEENPGYLTGERIPYIEACLSES*IPFPAI
Trigger: GATGGCGGGAAAAGGGATCAAAGACTCAGAGAGACA...TGCTTCAATATATGGAATCCTTTCCCCTGTAAGATAACCTGGGTTTTCCTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
CDS-3UTR CAA 90 bp CACAGTGTTTGCTTTCTCGAACCACTTCTTGTACCAACTGTTGCAGGTTGGCTTTCTCAGAAGTGTGCTTaGCATATACACTTTCTCAGG +
Preference number: 5 (lower is better)
Translates to: HSVCFLEPLLVPTVAGWLSQKCA*HIHFLR
Trigger: CCTGAGAAAGTGTATATGCAAAGCACACTTCTGAGA...AAGCCAACCTGCAACAGTTGGTACAAGAAGTGGTTCGAGAAAGCAAACACTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
CDS-3UTR CAA 90 bp GTTATCTTACAGGGGAAAGGATTCCATATATTGAAGCAAGATGGAGTGCCAGCCTCATCATCTTCTCTGTaGTCAGGTTGGGCACTTAGT +
Preference number: 5 (lower is better)
Translates to: VILQGKGFHILKQDGVPASSSSL*SGWALS
Trigger: ACTAAGTGCCCAACCTGACAACAGAGAAGATGATGA...GGCTGGCACTCCATCTTGCTTCAATATATGGAATCCTTTCCCCTGTAAGATAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000452188.5
CDS-3UTR CAA 90 bp AAATGCCTCTTAAGGGTACCACCTCCCAACACTGTCACATTGGGAACCCATCCTGTGATGACAGAATCATaGTCAGCAAAGAAGGTAAAT +
Preference number: 5 (lower is better)
Translates to: KCLLRVPPPNTVTLGTHPVMTES*SAKKVN
Trigger: ATTTACCTTCTTTGCTGACAATGATTCTGTCATCAC...AGGATGGGTTCCCAATGTGACAGTGTTGGGAGGTGGTACCCTTAAGAGGCATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000452188.5
CDS-3UTR CAA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGGCCTCAACCTGGGAATaGGCCCTCAAGTTTGCCTTG +
Preference number: 5 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKASTWE*ALKFAL
Trigger: CAAGGCAAACTTGAGGGCCAATTCCCAGGTTGAGGC...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CAA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGGGCCCTGTCTTACACTaGGCTTTGGCTTTGCCCCTA +
Preference number: 5 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKGPVLH*ALALPL
Trigger: TAGGGGCAAAGCCAAAGCCAAGTGTAAGACAGGGCC...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CAA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGCCTCAGCCTCAGGCTTaGCATAGGCCTCATCTTCTG +
Preference number: 5 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKPQPQA*HRPHLL
Trigger: CAGAAGATGAGGCCTATGCAAAGCCTGAGGCTGAGG...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CAA 90 bp TTGCTTTTAACAAATCCTGAGTCTACTCCTCAGATTTCTCCACCTTCTACCACCTGCTCCAATCTCGACTaGGGGTTTAGTCTTAATCTC +
Preference number: 5 (lower is better)
Translates to: LLLTNPESTPQISPPSTTCSNLD*GFSLNL
Trigger: GAGATTAAGACTAAACCCCAAGTCGAGATTGGAGCA...GGTGGTAGAAGGTGGAGAAATCTGAGGAGTAGACTCAGGATTTGTTAAAAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455331.5
CDS-3UTR CAA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGGCTATAGCAGTGGCCTaGGTCTCTACTTCAGCCCTA +
Preference number: 5 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKAIAVA*VSTSAL
Trigger: TAGGGCTGAAGTAGAGACCAAGGCCACTGCTATAGC...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CAA 90 bp GAAGAATCCATTCAGTTTCTGCTCATGAAGCATACTAAAAATATCTCAATCCAGTCCCTGGCTTTGGCCTaGACCTCAGTCAGAGTCACT +
Preference number: 5 (lower is better)
Translates to: EESIQFLLMKHTKNISIQSLALA*TSVRVT
Trigger: AGTGACTCTGACTGAGGTCAAGGCCAAAGCCAGGGA...CTGGATTGAGATATTTTTAGTATGCTTCATGAGCAGAAACTGAATGGATTCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CAA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGGTCATTGCTTCTCTCTaGGCCTCTGTCTTGGCAACC +
Preference number: 5 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKVIASL*ASVLAT
Trigger: GGTTGCCAAGACAGAGGCCAAGAGAGAAGCAATGAC...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CAA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGCTTTGGTCTGGGTCATaGCTTCTCTCTTGGCCTCTG +
Preference number: 5 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKLWSGS*LLSWPL
Trigger: CAGAGGCCAAGAGAGAAGCAATGACCCAGACCAAAG...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CAA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGTCCACAATTCCAGTCTaGTTCGTGGCCCCCATCTTG +
Preference number: 5 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKSTIPV*FVAPIL
Trigger: CAAGATGGGGGCCACGAACAAGACTGGAATTGTGGA...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CAA 90 bp ATTCATCTCCAAAATTTCATCACAGTGTTTGCTTTCTCGAACCACTTCTTGTACTCCACAATTCCAGTCTaGTTCGTGGCCCCCATCTTG +
Preference number: 5 (lower is better)
Translates to: IHLQNFITVFAFSNHFLYSTIPV*FVAPIL
Trigger: CAAGATGGGGGCCACGAACAAGACTGGAATTGTGGA...GTACAAGAAGTGGTTCGAGAAAGCAAACACTGTGATGAAATTTTGGAGATGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CAA 90 bp TTCATCACAGTGTTTGCTTTCTCGAACCACTTCTTGTACCAACTGTTGCAGGTTTCCAGAGCTCTTGTCTaGGTTTCATCCACAATTCCA +
Preference number: 5 (lower is better)
Translates to: FITVFAFSNHFLYQLLQVSRALV*VSSTIP
Trigger: TGGAATTGTGGATGAAACCAAGACAAGAGCTCTGGA...AACCTGCAACAGTTGGTACAAGAAGTGGTTCGAGAAAGCAAACACTGTGATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CAA 90 bp CAGGTTATCTTACAGGGGAAAGGATTCCATATATTGAAGCAAGATGGAGTGCCATCTCTTCCAGAGCTCTaGTCTTGGTTTCATCCACAA +
Preference number: 5 (lower is better)
Translates to: QVILQGKGFHILKQDGVPSLPEL*SWFHPQ
Trigger: TTGTGGATGAAACCAAGACAAGAGCTCTGGAAGAGA...TGGCACTCCATCTTGCTTCAATATATGGAATCCTTTCCCCTGTAAGATAACCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CAA 90 bp TTCATCACAGTGTTTGCTTTCTCGAACCACTTCTTGTACCAACTGTTGCAGGTTTTCTCGAACCACTTCTaGTACCAACTGTTGCAGGTT +
Preference number: 5 (lower is better)
Translates to: FITVFAFSNHFLYQLLQVFSNHF*YQLLQV
Trigger: AACCTGCAACAGTTGGTACAAGAAGTGGTTCGAGAA...AACCTGCAACAGTTGGTACAAGAAGTGGTTCGAGAAAGCAAACACTGTGATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CAA 90 bp ATTTCATCACAGTGTTTGCTTTCTCGAACCACTTCTTGTACCAACTGTTGCAGGTTCTCGAACCACTTCTaGTACCAACTGTTGCAGGTT +
Preference number: 5 (lower is better)
Translates to: ISSQCLLSRTTSCTNCCRFSNHF*YQLLQV
Trigger: AACCTGCAACAGTTGGTACAAGAAGTGGTTCGAGAA...CCTGCAACAGTTGGTACAAGAAGTGGTTCGAGAAAGCAAACACTGTGATGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CAA 90 bp CACAGTGTTTGCTTTCTCGAACCACTTCTTGTACCAACTGTTGCAGGTTGGCTTTCCCGAAACTCTTTGTaGGTGTATTCTCTTTCTTTC +
Preference number: 5 (lower is better)
Translates to: HSVCFLEPLLVPTVAGWLSRNSL*VYSLSF
Trigger: GAAAGAAAGAGAATACACCAACAAAGAGTTTCGGGA...AAGCCAACCTGCAACAGTTGGTACAAGAAGTGGTTCGAGAAAGCAAACACTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
CDS-3UTR CAA 90 bp CAGGAAGCTACTGGAAGATATGTTAGTTTTGAGGGCTGGGAAGTTCAAGACTGGTCCCGAAACTCTTTGTaGGTGTATTCTCTTTCTTTC +
Preference number: 5 (lower is better)
Translates to: QEATGRYVSFEGWEVQDWSRNSL*VYSLSF
Trigger: GAAAGAAAGAGAATACACCAACAAAGAGTTTCGGGA...CCAGTCTTGAACTTCCCAGCCCTCAAAACTAACATATCTTCCAGTAGCTTCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354842.4
ENST00000442270.5
ENST00000452188.5
CDS-3UTR CAA 90 bp TCATCTCCAAAATTTCATCACAGTGTTTGCTTTCTCGAACCACTTCTTGTACCATGTCTCTCTGAGTCTTaGATCCCTTTTCCCGCCATC +
Preference number: 5 (lower is better)
Translates to: SSPKFHHSVCFLEPLLVPCLSES*IPFPAI
Trigger: GATGGCGGGAAAAGGGATCAAAGACTCAGAGAGACA...TGGTACAAGAAGTGGTTCGAGAAAGCAAACACTGTGATGAAATTTTGGAGATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
CDS-3UTR CAA 90 bp GTTATCTTACAGGGGAAAGGATTCCATATATTGAAGCAAGATGGAGTGCCAGCCGAAGATATGTTAGTTTaGAGGGCTGGGAAGTTCAAG +
Preference number: 5 (lower is better)
Translates to: VILQGKGFHILKQDGVPAEDMLV*RAGKFK
Trigger: CTTGAACTTCCCAGCCCTCAAAACTAACATATCTTC...GGCTGGCACTCCATCTTGCTTCAATATATGGAATCCTTTCCCCTGTAAGATAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354842.4
ENST00000442270.5
ENST00000452188.5
CDS-3UTR CAA 90 bp TCAGCTTTTTGTTATTCTTTTCCAGAGCTCAATCTGCTTAGCAACAGCCGCCCATCTCAGAAGTGTGCTTaGCATATACACTTTCTCAGG +
Preference number: 5 (lower is better)
Translates to: SAFCYSFPELNLLSNSRPSQKCA*HIHFLR
Trigger: CCTGAGAAAGTGTATATGCAAAGCACACTTCTGAGA...TGGGCGGCTGTTGCTAAGCAGATTGAGCTCTGGAAAAGAATAACAAAAAGCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
CDS-3UTR CAA 90 bp CAGGTTATCTTACAGGGGAAAGGATTCCATATATTGAAGCAAGATGGAGTGCCATCATCATCTTCTCTGTaGTCAGGTTGGGCACTTAGT +
Preference number: 5 (lower is better)
Translates to: QVILQGKGFHILKQDGVPSSSSL*SGWALS
Trigger: ACTAAGTGCCCAACCTGACAACAGAGAAGATGATGA...TGGCACTCCATCTTGCTTCAATATATGGAATCCTTTCCCCTGTAAGATAACCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000452188.5
CDS-3UTR CAA 90 bp GAAGAATCCATTCAGTTTCTGCTCATGAAGCATACTAAAAATATCTCAATCCAGGCCCTCAAGTTTGCCTaGGCCCCTGCTTTAGTCATG +
Preference number: 5 (lower is better)
Translates to: EESIQFLLMKHTKNISIQALKFA*APALVM
Trigger: CATGACTAAAGCAGGGGCCAAGGCAAACTTGAGGGC...CTGGATTGAGATATTTTTAGTATGCTTCATGAGCAGAAACTGAATGGATTCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CAA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGGACCCCAGCCTGAGGTaGTGTACAGGTTTTCATGTC +
Preference number: 5 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKDPSLR*CTGFHV
Trigger: GACATGAAAACCTGTACACAACCTCAGGCTGGGGTC...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CAA 90 bp GAAGAATCCATTCAGTTTCTGCTCATGAAGCATACTAAAAATATCTCAATCCAGGAAGTGGACATAGACTaGTCCCTTGCCCCAGGCAAG +
Preference number: 5 (lower is better)
Translates to: EESIQFLLMKHTKNISIQEVDID*SLAPGK
Trigger: CTTGCCTGGGGCAAGGGACAAGTCTATGTCCACTTC...CTGGATTGAGATATTTTTAGTATGCTTCATGAGCAGAAACTGAATGGATTCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CAA 90 bp TCCTGGACCATGAAGAAAGACAGGCTTATAGATTATCTGCTTTCTCTTCTTGCTCTATCAGACGAGGGTTaGGTAATAGCTGGACACAAG +
Preference number: 5 (lower is better)
Translates to: SWTMKKDRLIDYLLSLLALSDEG*VIAGHK
Trigger: CTTGTGTCCAGCTATTACCAAACCCTCGTCTGATAG...AGCAAGAAGAGAAAGCAGATAATCTATAAGCCTGTCTTTCTTCATGGTCCAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445416.5
CDS-3UTR CAA 90 bp CATTCCATTGACCAAACCCAAGCAGAAGTCAATTACAAATGGAGTCTGGGGGATTCTTTCTTAACTATTTaGCCAGCCTCAGCATCAGTT +
Preference number: 5 (lower is better)
Translates to: HSIDQTQAEVNYKWSLGDSFLTI*PASASV
Trigger: AACTGATGCTGAGGCTGGCAAAATAGTTAAGAAAGA...ATCCCCCAGACTCCATTTGTAATTGACTTCTGCTTGGGTTTGGTCAATGGAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
CDS-3UTR CAA 90 bp ATCTTACAGGGGAAAGGATTCCATATATTGAAGCAAGATGGAGTGCCAGCCCTTTCTTTCTTAACTATTTaGCCAGCCTCAGCATCAGTT +
Preference number: 5 (lower is better)
Translates to: ILQGKGFHILKQDGVPALSFLTI*PASASV
Trigger: AACTGATGCTGAGGCTGGCAAAATAGTTAAGAAAGA...AAGGGCTGGCACTCCATCTTGCTTCAATATATGGAATCCTTTCCCCTGTAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CAA 90 bp AAACATAGCCCAAATCAGAGTGGGAGCAGTGAAGAAATACATTGTCTTCTCTCTTCTCTTCCAGAGCTCTaGTCTTGGTTTCATCCACAA +
Preference number: 5 (lower is better)
Translates to: KHSPNQSGSSEEIHCLLSSLPEL*SWFHPQ
Trigger: TTGTGGATGAAACCAAGACAAGAGCTCTGGAAGAGA...AGAGAGAAGACAATGTATTTCTTCACTGCTCCCACTCTGATTTGGGCTATGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
CDS-3UTR CAA 90 bp TTATGTCTCTCTGAGTCTTTGATCCCTTTTCCCGCCATCTTCTATGGCAACTCTAAAGGATTCCATATATaGAAGCAAGATGGAGTGCCA +
Preference number: 5 (lower is better)
Translates to: LCLSESLIPFPAIFYGNSKGFHI*KQDGVP
Trigger: TGGCACTCCATCTTGCTTCAATATATGGAATCCTTT...AGAGTTGCCATAGAAGATGGCGGGAAAAGGGATCAAAGACTCAGAGAGACATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
CDS-3UTR CAA 90 bp CCAGGTTATCTTACAGGGGAAAGGATTCCATATATTGAAGCAAGATGGAGTGCCAAAGGATTCCATATATaGAAGCAAGATGGAGTGCCA +
Preference number: 5 (lower is better)
Translates to: PGYLTGERIPYIEARWSAKGFHI*KQDGVP
Trigger: TGGCACTCCATCTTGCTTCAATATATGGAATCCTTT...GGCACTCCATCTTGCTTCAATATATGGAATCCTTTCCCCTGTAAGATAACCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CAA 90 bp TCAGCTTTTTGTTATTCTTTTCCAGAGCTCAATCTGCTTAGCAACAGCCGCCCAAAAGGATTCCATATATaGAAGCAAGATGGAGTGCCA +
Preference number: 5 (lower is better)
Translates to: SAFCYSFPELNLLSNSRPKGFHI*KQDGVP
Trigger: TGGCACTCCATCTTGCTTCAATATATGGAATCCTTT...TGGGCGGCTGTTGCTAAGCAGATTGAGCTCTGGAAAAGAATAACAAAAAGCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
CDS-3UTR CAA 90 bp GTTATCTTACAGGGGAAAGGATTCCATATATTGAAGCAAGATGGAGTGCCAGCCTCCCGAAACTCTTTGTaGGTGTATTCTCTTTCTTTC +
Preference number: 5 (lower is better)
Translates to: VILQGKGFHILKQDGVPASRNSL*VYSLSF
Trigger: GAAAGAAAGAGAATACACCAACAAAGAGTTTCGGGA...GGCTGGCACTCCATCTTGCTTCAATATATGGAATCCTTTCCCCTGTAAGATAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
CDS-3UTR CAA 90 bp GAGTTCGTGTCATTTCCTGTGGTTTTCTCCAGGGTATTAAATCCTGTATTCTGGGAAGATATGTTAGTTTaGAGGGCTGGGAAGTTCAAG +
Preference number: 5 (lower is better)
Translates to: EFVSFPVVFSRVLNPVFWEDMLV*RAGKFK
Trigger: CTTGAACTTCCCAGCCCTCAAAACTAACATATCTTC...CCAGAATACAGGATTTAATACCCTGGAGAAAACCACAGGAAATGACACGAACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354842.4
ENST00000442270.5
ENST00000452188.5
CDS-3UTR CAA 90 bp ATTTCATCACAGTGTTTGCTTTCTCGAACCACTTCTTGTACCAACTGTTGCAGGTCTCAGAAGTGTGCTTaGCATATACACTTTCTCAGG +
Preference number: 5 (lower is better)
Translates to: ISSQCLLSRTTSCTNCCRSQKCA*HIHFLR
Trigger: CCTGAGAAAGTGTATATGCAAAGCACACTTCTGAGA...CCTGCAACAGTTGGTACAAGAAGTGGTTCGAGAAAGCAAACACTGTGATGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
CDS-3UTR CAA 90 bp TGGAAGATATGTTCTGTTAGTTTTGAGGGCTGGGAAGTTCAAGACTGGGCAGTCGTGATGACAGAATCATaGTCAGCAAAGAAGGTAAAT +
Preference number: 5 (lower is better)
Translates to: WKICSVSFEGWEVQDWAVVMTES*SAKKVN
Trigger: ATTTACCTTCTTTGCTGACAATGATTCTGTCATCAC...GACTGCCCAGTCTTGAACTTCCCAGCCCTCAAAACTAACAGAACATATCTTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433011.5
CDS-3UTR CAA 90 bp CAGGTTATCTTACAGGGGAAAGGATTCCATATATTGAAGCAAGATGGAGTGCCATATGTTCTGTTAGTTTaGAGGGCTGGGAAGTTCAAG +
Preference number: 5 (lower is better)
Translates to: QVILQGKGFHILKQDGVPYVLLV*RAGKFK
Trigger: CTTGAACTTCCCAGCCCTCAAAACTAACAGAACATA...TGGCACTCCATCTTGCTTCAATATATGGAATCCTTTCCCCTGTAAGATAACCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433011.5
ENST00000445416.5
CDS-3UTR CAA 90 bp GAAGAATCCATTCAGTTTCTGCTCATGAAGCATACTAAAAATATCTCAATCCAGACCTTACACATGGCATaGGTGTTACCCCCGGCATCA +
Preference number: 5 (lower is better)
Translates to: EESIQFLLMKHTKNISIQTLHMA*VLPPAS
Trigger: TGATGCCGGGGGTAACACCAATGCCATGTGTAAGGT...CTGGATTGAGATATTTTTAGTATGCTTCATGAGCAGAAACTGAATGGATTCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CAA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGGGCCACAGTCTGAGGTaGTATACAAGCTCTCACATC +
Preference number: 5 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKGHSLR*YTSSHI
Trigger: GATGTGAGAGCTTGTATACAACCTCAGACTGTGGCC...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CAA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGTTCACCTCAGGGTCATaGCATTCTGCTGCTAAGGCT +
Preference number: 5 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKFTSGS*HSAAKA
Trigger: AGCCTTAGCAGCAGAATGCAATGACCCTGAGGTGAA...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CAA 90 bp TCATCTCCAAAATTTCATCACAGTGTTTGCTTTCTCGAACCACTTCTTGTACCATGCTCCAATCTCGACTaGGGGTTTAGTCTTAATCTC +
Preference number: 5 (lower is better)
Translates to: SSPKFHHSVCFLEPLLVPCSNLD*GFSLNL
Trigger: GAGATTAAGACTAAACCCCAAGTCGAGATTGGAGCA...TGGTACAAGAAGTGGTTCGAGAAAGCAAACACTGTGATGAAATTTTGGAGATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CAA 90 bp ATTTCATCACAGTGTTTGCTTTCTCGAACCACTTCTTGTACCAACTGTTGCAGGTCTTTCTTAACTATTTaGCCAGCCTCAGCATCAGTT +
Preference number: 5 (lower is better)
Translates to: ISSQCLLSRTTSCTNCCRSFLTI*PASASV
Trigger: AACTGATGCTGAGGCTGGCAAAATAGTTAAGAAAGA...CCTGCAACAGTTGGTACAAGAAGTGGTTCGAGAAAGCAAACACTGTGATGAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS-3UTR CAA 90 bp TCTGAGGAAAACCCAGGTTATCTTACAGGGGAAAGGATTCCATATATTGAAGCATCTCAGAAGTGTGCTTaGCATATACACTTTCTCAGG +
Preference number: 5 (lower is better)
Translates to: SEENPGYLTGERIPYIEASQKCA*HIHFLR
Trigger: CCTGAGAAAGTGTATATGCAAAGCACACTTCTGAGA...TGCTTCAATATATGGAATCCTTTCCCCTGTAAGATAACCTGGGTTTTCCTCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000445416.5
ENST00000452188.5
CDS-3UTR CAA 90 bp CCAGGTTATCTTACAGGGGAAAGGATTCCATATATTGAAGCAAGATGGAGTGCCGTGATGACAGAATCATaGTCAGCAAAGAAGGTAAAT +
Preference number: 5 (lower is better)
Translates to: PGYLTGERIPYIEARWSAVMTES*SAKKVN
Trigger: ATTTACCTTCTTTGCTGACAATGATTCTGTCATCAC...GGCACTCCATCTTGCTTCAATATATGGAATCCTTTCCCCTGTAAGATAACCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000452188.5
CDS-3UTR CAA 90 bp CATTCCATTGACCAAACCCAAGCAGAAGTCAATTACAAATGGAGTCTGGGGGATGTGATGACAGAATCATaGTCAGCAAAGAAGGTAAAT +
Preference number: 5 (lower is better)
Translates to: HSIDQTQAEVNYKWSLGDVMTES*SAKKVN
Trigger: ATTTACCTTCTTTGCTGACAATGATTCTGTCATCAC...ATCCCCCAGACTCCATTTGTAATTGACTTCTGCTTGGGTTTGGTCAATGGAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000442270.5
ENST00000452188.5
CDS-3UTR CAA 90 bp ATTTCATCACAGTGTTTGCTTTCTCGAACCACTTCTTGTACCAACTGTTGCAGGATGCTAAAATCTCAGTaGGAAATGCAGAAATCACCC +
Preference number: 5 (lower is better)
Translates to: ISSQCLLSRTTSCTNCCRMLKSQ*EMQKSP
Trigger: GGGTGATTTCTGCATTTCCAACTGAGATTTTAGCAT...CCTGCAACAGTTGGTACAAGAAGTGGTTCGAGAAAGCAAACACTGTGATGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433011.5
ENST00000442270.5
CDS-3UTR CAA 90 bp GAAGAATCCATTCAGTTTCTGCTCATGAAGCATACTAAAAATATCTCAATCCAGGCCATAACATTGGGATaGCCTCTGCTCTTATCCCTG +
Preference number: 5 (lower is better)
Translates to: EESIQFLLMKHTKNISIQAITLG*PLLLSL
Trigger: CAGGGATAAGAGCAGAGGCAATCCCAATGTTATGGC...CTGGATTGAGATATTTTTAGTATGCTTCATGAGCAGAAACTGAATGGATTCTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CAA 90 bp GAAGAATCCATTCAGTTTCTGCTCATGAAGCATACTAAAAATATCTCAATCCAGGTCTTACACTTGGCTTaGGCTTTGCCCCTAGCCTTA +
Preference number: 5 (lower is better)
Translates to: EESIQFLLMKHTKNISIQVLHLA*ALPLAL
Trigger: TAAGGCTAGGGGCAAAGCCAAAGCCAAGTGTAAGAC...CTGGATTGAGATATTTTTAGTATGCTTCATGAGCAGAAACTGAATGGATTCTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CAA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGGGCACAGTAGTGGGATaGCCTCTGATCTTATTCTTG +
Preference number: 5 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKGTVVG*PLILFL
Trigger: CAAGAATAAGATCAGAGGCAATCCCACTACTGTGCC...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CAA 90 bp GAAGAATCCATTCAGTTTCTGCTCATGAAGCATACTAAAAATATCTCAATCCAGGAGCCACTACTAGCCTaGTTCTCAGCCTCAATCCTA +
Preference number: 5 (lower is better)
Translates to: EESIQFLLMKHTKNISIQEPLLA*FSASIL
Trigger: TAGGATTGAGGCTGAGAACAAGGCTAGTAGTGGCTC...CTGGATTGAGATATTTTTAGTATGCTTCATGAGCAGAAACTGAATGGATTCTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CAA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGTTCCCCAGTCCTGGTTaGTTTTCTGGACTCATCTTC +
Preference number: 5 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKFPSPG*FSGLIF
Trigger: GAAGATGAGTCCAGAAAACAAACCAGGACTGGGGAA...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS TCA 90 bp GCGTCTTCTCTTCACATTTGTTTGTTTCATTATCAGATTGTTGTCTaGCCACCTCTTCACCTCCCACTCTGTATAAGCTTCCACAAATTT +
Preference number: 5 (lower is better)
Translates to: ASSLHICLFHYQIVV*PPLHLPLCISFHKF
Trigger: AAATTTGTGGAAGCTTATACAGAGTGGGAGGTGAAGAGGTGGTCAGACAACAATCTGATAATGAAACAAACAAATGTGAAGAGAAGACGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431677.1
CDS-3UTR CAA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGTGCTCCAATCTCGACTaGGGGTTTAGTCTTAATCTC +
Preference number: 5 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKCSNLD*GFSLNL
Trigger: GAGATTAAGACTAAACCCCAAGTCGAGATTGGAGCA...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CAA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGTCTCTTCCAGAGCTCTaGTCTTGGTTTCATCCACAA +
Preference number: 5 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKSLPEL*SWFHPQ
Trigger: TTGTGGATGAAACCAAGACAAGAGCTCTGGAAGAGA...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CAA 90 bp GAAGAATCCATTCAGTTTCTGCTCATGAAGCATACTAAAAATATCTCAATCCAGGGTTTTGGCAAAAATTaGAGGCTGAGCAGAAGCCCT +
Preference number: 5 (lower is better)
Translates to: EESIQFLLMKHTKNISIQGFGKN*RLSRSP
Trigger: AGGGCTTCTGCTCAGCCTCAAATTTTTGCCAAAACC...CTGGATTGAGATATTTTTAGTATGCTTCATGAGCAGAAACTGAATGGATTCTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CAA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGGGCATGGTATTGACATaGCCCCTGACCTTAATTTTG +
Preference number: 5 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKGMVLT*PLTLIL
Trigger: CAAAATTAAGGTCAGGGGCAATGTCAATACCATGCC...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CAA 90 bp GAAGAATCCATTCAGTTTCTGCTCATGAAGCATACTAAAAATATCTCAATCCAGGAAGCTGGCCTCACTTaGGTGTGCAAACTTAGTTTC +
Preference number: 5 (lower is better)
Translates to: EESIQFLLMKHTKNISIQEAGLT*VCKLSF
Trigger: GAAACTAAGTTTGCACACCAAAGTGAGGCCAGCTTC...CTGGATTGAGATATTTTTAGTATGCTTCATGAGCAGAAACTGAATGGATTCTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CAA 90 bp GAAGAATCCATTCAGTTTCTGCTCATGAAGCATACTAAAAATATCTCAATCCAGAAGGCTCGAAGTTTCTaGGCACATGCTTTAGGTCGT +
Preference number: 5 (lower is better)
Translates to: EESIQFLLMKHTKNISIQKARSF*AHALGR
Trigger: ACGACCTAAAGCATGTGCCAAGAAACTTCGAGCCTT...CTGGATTGAGATATTTTTAGTATGCTTCATGAGCAGAAACTGAATGGATTCTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CAA 90 bp CAGGTTATCTTACAGGGGAAAGGATTCCATATATTGAAGCAAGATGGAGTGCCAAATAACACGACACATTaGTTAGAGATTTGGATGCAG +
Preference number: 5 (lower is better)
Translates to: QVILQGKGFHILKQDGVPNNTTH*LEIWMQ
Trigger: CTGCATCCAAATCTCTAACAAATGTGTCGTGTTATT...TGGCACTCCATCTTGCTTCAATATATGGAATCCTTTCCCCTGTAAGATAACCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445416.5
CDS-3UTR CAA 90 bp GAAGAATCCATTCAGTTTCTGCTCATGAAGCATACTAAAAATATCTCAATCCAGTCCAGAGCTCTTGTCTaGGTTTCATCCACAATTCCA +
Preference number: 5 (lower is better)
Translates to: EESIQFLLMKHTKNISIQSRALV*VSSTIP
Trigger: TGGAATTGTGGATGAAACCAAGACAAGAGCTCTGGA...CTGGATTGAGATATTTTTAGTATGCTTCATGAGCAGAAACTGAATGGATTCTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CAA 90 bp GAAGAATCCATTCAGTTTCTGCTCATGAAGCATACTAAAAATATCTCAATCCAGCCCCTGACCTTAATTTaGCCATCAGACAAGGTATCA +
Preference number: 5 (lower is better)
Translates to: EESIQFLLMKHTKNISIQPLTLI*PSDKVS
Trigger: TGATACCTTGTCTGATGGCAAAATTAAGGTCAGGGG...CTGGATTGAGATATTTTTAGTATGCTTCATGAGCAGAAACTGAATGGATTCTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CAA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGGCATTAAGATTGGCCTaGACCTTATTTTTGGCACCA +
Preference number: 5 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKALRLA*TLFLAP
Trigger: TGGTGCCAAAAATAAGGTCAAGGCCAATCTTAATGC...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CAA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGCAGATTTGTCCTCACTaGTGTTTTCATTACCAGCAC +
Preference number: 5 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKQICPH*CFHYQH
Trigger: GTGCTGGTAATGAAAACACAAGTGAGGACAAATCTG...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CAA 90 bp GAAGAATCCATTCAGTTTCTGCTCATGAAGCATACTAAAAATATCTCAATCCAGGCCTTAGGTGCAGATTaGTCCTCACTTGTGTTTTCA +
Preference number: 5 (lower is better)
Translates to: EESIQFLLMKHTKNISIQALGAD*SSLVFS
Trigger: TGAAAACACAAGTGAGGACAAATCTGCACCTAAGGC...CTGGATTGAGATATTTTTAGTATGCTTCATGAGCAGAAACTGAATGGATTCTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CAA 90 bp GAAGAATCCATTCAGTTTCTGCTCATGAAGCATACTAAAAATATCTCAATCCAGGACTCAGATGACTTTTaGGCTTTAGCCTTAGGTGCA +
Preference number: 5 (lower is better)
Translates to: EESIQFLLMKHTKNISIQDSDDF*ALALGA
Trigger: TGCACCTAAGGCTAAAGCCAAAAAGTCATCTGAGTC...CTGGATTGAGATATTTTTAGTATGCTTCATGAGCAGAAACTGAATGGATTCTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CAA 90 bp AGGACCAAAGATTACCTTACTTATGAAGAATCCATTCAGTTTCTGCTCATGAAGACGGATATATGCCTCTaGACTCAGATGACTTTTTGG +
Preference number: 5 (lower is better)
Translates to: RTKDYLTYEESIQFLLMKTDICL*TQMTFW
Trigger: CCAAAAAGTCATCTGAGTCAAGAGGCATATATCCGT...CTTCATGAGCAGAAACTGAATGGATTCTTCATAAGTAAGGTAATCTTTGGTCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS TCA 90 bp CTGCCTAACACTGGGGTAGGGATTATTGAGCAAGCTTTCAATAACTaGAATTCCACCTACATTACGAACAACTTCATGAGAATAAGAATA +
Preference number: 5 (lower is better)
Translates to: LPNTGVGIIEQAFNN*NSTYITNNFMRIRI
Trigger: TATTCTTATTCTCATGAAGTTGTTCGTAATGTAGGTGGAATTTCAGTTATTGAAAGCTTGCTCAATAATCCCTACCCCAGTGTTAGGCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CAA 90 bp GAAGAATCCATTCAGTTTCTGCTCATGAAGCATACTAAAAATATCTCAATCCAGGCCTTAGATATGACATaGGTATTTCCCCTACCATCA +
Preference number: 5 (lower is better)
Translates to: EESIQFLLMKHTKNISIQALDMT*VFPLPS
Trigger: TGATGGTAGGGGAAATACCAATGTCATATCTAAGGC...CTGGATTGAGATATTTTTAGTATGCTTCATGAGCAGAAACTGAATGGATTCTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CAA 90 bp GAAGAATCCATTCAGTTTCTGCTCATGAAGCATACTAAAAATATCTCAATCCAGAGTGATGTTGGTGCATaGGCAATGAGCAAGTCTTTT +
Preference number: 5 (lower is better)
Translates to: EESIQFLLMKHTKNISIQSDVGA*AMSKSF
Trigger: AAAAGACTTGCTCATTGCCAATGCACCAACATCACT...CTGGATTGAGATATTTTTAGTATGCTTCATGAGCAGAAACTGAATGGATTCTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS-3UTR CAA 90 bp GAAGAATCCATTCAGTTTCTGCTCATGAAGCATACTAAAAATATCTCAATCCAGTCTTTCTTAACTATTTaGCCAGCCTCAGCATCAGTT +
Preference number: 5 (lower is better)
Translates to: EESIQFLLMKHTKNISIQSFLTI*PASASV
Trigger: AACTGATGCTGAGGCTGGCAAAATAGTTAAGAAAGA...CTGGATTGAGATATTTTTAGTATGCTTCATGAGCAGAAACTGAATGGATTCTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS TCA 72 bp GTAGACAATGCGAGTTTCTTCCGTCATTCGCCACGCTaGCCACTTCCCCTCTGCTGCCTCCCGCTGAAGCCC +
Preference number: 6 (lower is better)
Translates to: VDNASFFRHSPR*PLPLCCLPLKP
Trigger: GGGCTTCAGCGGGAGGCAGCAGAGGGGAAGTGGTCAGCGTGGCGAATGACGGAAGAAACTCGCATTGTCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430461.5
ENST00000433011.5
ENST00000453574.1
CDS CAA 90 bp GACCCTATAACGGCCTCAGCTCCAGGCCCAAACCAGAATCCTTCATaGGCCTCCACCTCAAAACTGACCTGGAACCTTCCACTGGCCTGG +
Preference number: 6 (lower is better)
Translates to: DPITASAPGPNQNPS*ASTSKLTWNLPLAW
Trigger: CCAGGCCAGTGGAAGGTTCCAGGTCAGTTTTGAGGTGGAGGCCAATGAAGGATTCTGGTTTGGGCCTGGAGCTGAGGCCGTTATAGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS TCA 72 bp GATGTTAGGCTGAGTCTTTCTGCAGGCTTGAGTGCCTaGCCCACCCTCACTCTCAGAAGTGGGCATGGCCTC +
Preference number: 6 (lower is better)
Translates to: DVRLSLSAGLSA*PTLTLRSGHGL
Trigger: GAGGCCATGCCCACTTCTGAGAGTGAGGGTGGGTCAGGCACTCAAGCCTGCAGAAAGACTCAGCCTAACATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS TCA 72 bp ATGACCAGTGTTCCAGCCACCACTTTGGACTCAGATTaGGTCTCTGGCTCTGCCCCAACCATTGCCTTGGCC +
Preference number: 6 (lower is better)
Translates to: MTSVPATTLDSD*VSGSAPTIALA
Trigger: GGCCAAGGCAATGGTTGGGGCAGAGCCAGAGACTCAATCTGAGTCCAAAGTGGTGGCTGGAACACTGGTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000423738.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS TCA 72 bp CTAGCATCAACTGTGGCACCAGGCCTGGCCTCAGACTaGGTCTTAGCCACACTCACAGTCTCTTCCAGAGCT +
Preference number: 6 (lower is better)
Translates to: LASTVAPGLASD*VLATLTVSSRA
Trigger: AGCTCTGGAAGAGACTGTGAGTGTGGCTAAGACTCAGTCTGAGGCCAGGCCTGGTGCCACAGTTGATGCTAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS GCA 72 bp AGCCACCACTTTGGACTCAGATTGAGTCTCTGGCTCTaGCCCAACCATTGCCTTGGCCTGAGAGTTGGCTCT +
Preference number: 6 (lower is better)
Translates to: SHHFGLRLSLWL*PNHCLGLRVGS
Trigger: AGAGCCAACTCTCAGGCCAAGGCAATGGTTGGGGCAGAGCCAGAGACTCAATCTGAGTCCAAAGTGGTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000423738.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS GCA 72 bp CACAAGCATAACAGACAGGAGGTAGCAGACACTGAATaGTGGGTGGGCAGCCGAGCTCCCAGACAGCCTTTT +
Preference number: 6 (lower is better)
Translates to: HKHNRQEVADTE*WVGSRAPRQPF
Trigger: AAAAGGCTGTCTGGGAGCTCGGCTGCCCACCCAGCATTCAGTGTCTGCTACCTCCTGTCTGTTATGCTTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431677.1
CDS CAA 72 bp TGGGTCACTGCTTCTTTCATGGCCACTTCCCTGGCTTaGGCCTTGACCTCAGTCAGAGTCACTGCCTCTGTC +
Preference number: 6 (lower is better)
Translates to: WVTASFMATSLA*ALTSVRVTASV
Trigger: GACAGAGGCAGTGACTCTGACTGAGGTCAAGGCCAAAGCCAGGGAAGTGGCCATGAAAGAAGCAGTGACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000423738.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS CAA 72 bp TCATCCACAATTCCAGTCTTGTTCGTGGCCCCCATCTaGGCCACTTCCCTGGGTACTGCCAAGGTCTCACTC +
Preference number: 6 (lower is better)
Translates to: SSTIPVLFVAPI*ATSLGTAKVSL
Trigger: GAGTGAGACCTTGGCAGTACCCAGGGAAGTGGCCAAGATGGGGGCCACGAACAAGACTGGAATTGTGGATGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000423738.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS CAA 72 bp ACGGCCTCAGCTCCAGGCCCAAACCAGAATCCTTCATaGGCCTCCACCTCAAAACTGACCTGGAACCTTCCA +
Preference number: 6 (lower is better)
Translates to: TASAPGPNQNPS*ASTSKLTWNLP
Trigger: TGGAAGGTTCCAGGTCAGTTTTGAGGTGGAGGCCAATGAAGGATTCTGGTTTGGGCCTGGAGCTGAGGCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS GCA 72 bp TTCCCTGGCTTTGGCCTTGACCTCAGTCAGAGTCACTaGCTCTGTCATGACCAGTGTTCCAGCCACCACTTT +
Preference number: 6 (lower is better)
Translates to: FPGFGLDLSQSH*LCHDQCSSHHF
Trigger: AAAGTGGTGGCTGGAACACTGGTCATGACAGAGGCAGTGACTCTGACTGAGGTCAAGGCCAAAGCCAGGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000423738.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS GCA 72 bp GTTCGTGGCCCCCATCTTGGCCACTTCCCTGGGTACTaGCAAGGTCTCACTCTGTGTAACCATTACTCTGTT +
Preference number: 6 (lower is better)
Translates to: VRGPHLGHFPGY*QGLTLCNHYSV
Trigger: AACAGAGTAATGGTTACACAGAGTGAGACCTTGGCAGTACCCAGGGAAGTGGCCAAGATGGGGGCCACGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000423738.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS GCA 72 bp AGGCTTTGCATAGGCCTCATCTTCTGCTGTGGCTTCTaGCTCAGAAGTGGACATAGACTTGTCCCTTGCCCC +
Preference number: 6 (lower is better)
Translates to: RLCIGLIFCCGF*LRSGHRLVPCP
Trigger: GGGGCAAGGGACAAGTCTATGTCCACTTCTGAGGCAGAAGCCACAGCAGAAGATGAGGCCTATGCAAAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS GCA 72 bp GGCCTCAGCCTCAGGCTTTGCATAGGCCTCATCTTCTaGTGTGGCTTCTGCCTCAGAAGTGGACATAGACTT +
Preference number: 6 (lower is better)
Translates to: GLSLRLCIGLIF*CGFCLRSGHRL
Trigger: AAGTCTATGTCCACTTCTGAGGCAGAAGCCACAGCAGAAGATGAGGCCTATGCAAAGCCTGAGGCTGAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS CCA 72 bp AAAGCACGAACAAGGTATGGTAGAGCGCACTCGGGCTaGGGTAAAGAGAGTGGTAGTTGTGGGTGTAGGCCT +
Preference number: 6 (lower is better)
Translates to: KARTRYGRAHSG*GKESGSCGCRP
Trigger: AGGCCTACACCCACAACTACCACTCTCTTTACCCCAGCCCGAGTGCGCTCTACCATACCTTGTTCGTGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000423738.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS CCA 72 bp CAACCCCAGTACCAGGCATGTCATCACCCTGGATCTTaGTCACAGCCTGAGACTGTGCACAGGACTTCATGT +
Preference number: 6 (lower is better)
Translates to: QPQYQACHHPGS*SQPETVHRTSC
Trigger: ACATGAAGTCCTGTGCACAGTCTCAGGCTGTGACCAAGATCCAGGGTGATGACATGCCTGGTACTGGGGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS CAA 72 bp TTGGTCTGGGTCATTGCTTCTCTCTTGGCCTCTGTCTaGGCAACCAGCGCCCAAGCTTTAGCCTTGGTCTGT +
Preference number: 6 (lower is better)
Translates to: LVWVIASLLASV*ATSAQALALVC
Trigger: ACAGACCAAGGCTAAAGCTTGGGCGCTGGTTGCCAAGACAGAGGCCAAGAGAGAAGCAATGACCCAGACCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000423738.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS CAA 90 bp GCATCAGTTTGGGTCACTGCTTCTTTCATGGCCACTTCCCTGGCTTaGGCCTTGACCTCAGTCAGAGTCACTGCCTCTGTCATGACCAGT +
Preference number: 6 (lower is better)
Translates to: ASVWVTASFMATSLA*ALTSVRVTASVMTS
Trigger: ACTGGTCATGACAGAGGCAGTGACTCTGACTGAGGTCAAGGCCAAAGCCAGGGAAGTGGCCATGAAAGAAGCAGTGACCCAAACTGATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000423738.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS CAA 90 bp GTTTCAGCTTTGGTCTGGGTCATTGCTTCTCTCTTGGCCTCTGTCTaGGCAACCAGCGCCCAAGCTTTAGCCTTGGTCTGTGTCACTGCT +
Preference number: 6 (lower is better)
Translates to: VSALVWVIASLLASV*ATSAQALALVCVTA
Trigger: AGCAGTGACACAGACCAAGGCTAAAGCTTGGGCGCTGGTTGCCAAGACAGAGGCCAAGAGAGAAGCAATGACCCAGACCAAAGCTGAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000423738.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS CAA 90 bp GTCTTGGTTTCATCCACAATTCCAGTCTTGTTCGTGGCCCCCATCTaGGCCACTTCCCTGGGTACTGCCAAGGTCTCACTCTGTGTAACC +
Preference number: 6 (lower is better)
Translates to: VLVSSTIPVLFVAPI*ATSLGTAKVSLCVT
Trigger: GGTTACACAGAGTGAGACCTTGGCAGTACCCAGGGAAGTGGCCAAGATGGGGGCCACGAACAAGACTGGAATTGTGGATGAAACCAAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000423738.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS CAA 90 bp GTCTCTTCCAGAGCTCTTGTCTTGGTTTCATCCACAATTCCAGTCTaGTTCGTGGCCCCCATCTTGGCCACTTCCCTGGGTACTGCCAAG +
Preference number: 6 (lower is better)
Translates to: VSSRALVLVSSTIPV*FVAPILATSLGTAK
Trigger: CTTGGCAGTACCCAGGGAAGTGGCCAAGATGGGGGCCACGAACAAGACTGGAATTGTGGATGAAACCAAGACAAGAGCTCTGGAAGAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000423738.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS TCA 72 bp CAAACCAGAATCCTTCATTGGCCTCCACCTCAAAACTaGCCTGGAACCTTCCACTGGCCTGGTCCTCAGATC +
Preference number: 6 (lower is better)
Translates to: QTRILHWPPPQN*PGTFHWPGPQI
Trigger: GATCTGAGGACCAGGCCAGTGGAAGGTTCCAGGTCAGTTTTGAGGTGGAGGCCAATGAAGGATTCTGGTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS GCA 72 bp ACACATGGCATTGGTGTTACCCCCGGCATCAATCTTTaGCCCAGGAATGGCCTCAGTCTGGGTTTTGGCAAA +
Preference number: 6 (lower is better)
Translates to: THGIGVTPGINL*PRNGLSLGFGK
Trigger: TTTGCCAAAACCCAGACTGAGGCCATTCCTGGGGCAAAGATTGATGCCGGGGGTAACACCAATGCCATGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS CCA 72 bp TTGTCTTGGTTTCATCCACAATTCCAGTCTTGTTCGTaGCCCCCATCTTGGCCACTTCCCTGGGTACTGCCA +
Preference number: 6 (lower is better)
Translates to: LSWFHPQFQSCS*PPSWPLPWVLP
Trigger: TGGCAGTACCCAGGGAAGTGGCCAAGATGGGGGCCACGAACAAGACTGGAATTGTGGATGAAACCAAGACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000423738.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS CAA 90 bp TGGAGGTGGACCTGTAATGATCCGAGGCAGTTCCCTCCTCTCCTCTaGCTTCTCTTGGCAGTACACCCAGTCTATACTGATCAGGAGCAA +
Preference number: 6 (lower is better)
Translates to: WRWTCNDPRQFPPLL*LLLAVHPVYTDQEQ
Trigger: TTGCTCCTGATCAGTATAGACTGGGTGTACTGCCAAGAGAAGCAAGAGGAGAGGAGGGAACTGCCTCGGATCATTACAGGTCCACCTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354842.4
ENST00000455331.5
CDS CAA 90 bp GTTTTCATGTCCATCCCAGGCCCTGTCTTACACTTGGCTTTGGCTTaGCCCCTAGCCTTACCTCTAGTATTAGGTAAGGCTTCACCCTGG +
Preference number: 6 (lower is better)
Translates to: VFMSIPGPVLHLALA*PLALPLVLGKASPW
Trigger: CCAGGGTGAAGCCTTACCTAATACTAGAGGTAAGGCTAGGGGCAAAGCCAAAGCCAAGTGTAAGACAGGGCCTGGGATGGACATGAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS CAA 90 bp GGGATCAACACCTGTAATGATCCGAGGCAGTTCCCTCCTCTCCTCTaGCTTCTCTTGGCAGTACACCCAGTCTATACTGATCAGGAGCAA +
Preference number: 6 (lower is better)
Translates to: GINTCNDPRQFPPLL*LLLAVHPVYTDQEQ
Trigger: TTGCTCCTGATCAGTATAGACTGGGTGTACTGCCAAGAGAAGCAAGAGGAGAGGAGGGAACTGCCTCGGATCATTACAGGTGTTGATCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442270.5
ENST00000445416.5
CDS CAA 72 bp TCCATCCCAGGCCCTGTCTTACACTTGGCTTTGGCTTaGCCCCTAGCCTTACCTCTAGTATTAGGTAAGGCT +
Preference number: 6 (lower is better)
Translates to: SIPGPVLHLALA*PLALPLVLGKA
Trigger: AGCCTTACCTAATACTAGAGGTAAGGCTAGGGGCAAAGCCAAAGCCAAGTGTAAGACAGGGCCTGGGATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS CAA 72 bp CAGGTTTTCATGTCCATCCCAGGCCCTGTCTTACACTaGGCTTTGGCTTTGCCCCTAGCCTTACCTCTAGTA +
Preference number: 6 (lower is better)
Translates to: QVFMSIPGPVLH*ALALPLALPLV
Trigger: TACTAGAGGTAAGGCTAGGGGCAAAGCCAAAGCCAAGTGTAAGACAGGGCCTGGGATGGACATGAAAACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS CAA 90 bp GGGAATGCTCTTGGGATCAACACAGTCTCTTCCAGAGCTCTTGTCTaGGTTTCATCCACAATTCCAGTCTTGTTCGTGGCCCCCATCTTG +
Preference number: 6 (lower is better)
Translates to: GNALGINTVSSRALV*VSSTIPVLFVAPIL
Trigger: CAAGATGGGGGCCACGAACAAGACTGGAATTGTGGATGAAACCAAGACAAGAGCTCTGGAAGAGACTGTGTTGATCCCAAGAGCATTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS GCA 72 bp AGCCAATATATGAGTTTCAGCTTTGGTCTGGGTCATTaGTTCTCTCTTGGCCTCTGTCTTGGCAACCAGCGC +
Preference number: 6 (lower is better)
Translates to: SQYMSFSFGLGH*FSLGLCLGNQR
Trigger: GCGCTGGTTGCCAAGACAGAGGCCAAGAGAGAAGCAATGACCCAGACCAAAGCTGAAACTCATATATTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000423738.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS GCA 72 bp CTCATCTTCAACTGGGAAGCTGGCCTCACTTTGGTGTaGAAACTTAGTTTCCGACCAGATCATGGCTCCATC +
Preference number: 6 (lower is better)
Translates to: LIFNWEAGLTLV*KLSFRPDHGSI
Trigger: GATGGAGCCATGATCTGGTCGGAAACTAAGTTTGCACACCAAAGTGAGGCCAGCTTCCCAGTTGAAGATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS CAA 90 bp AGCCCTAGGCCCACTTCTTGCTCCAGTTTCTGCTCCAATCTCGACTaGGGGTTTAGTCTTAATCTCTGCTTCATTTATGGCCAAGGTCTG +
Preference number: 6 (lower is better)
Translates to: SPRPTSCSSFCSNLD*GFSLNLCFIYGQGL
Trigger: CAGACCTTGGCCATAAATGAAGCAGAGATTAAGACTAAACCCCAAGTCGAGATTGGAGCAGAAACTGGAGCAAGAAGTGGGCCTAGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000423738.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS CAA 90 bp GTACAGGTTTTCATGTCCATCCCAGGCCCTGTCTTACACTTGGCTTaGGCTTTGCCCCTAGCCTTACCTCTAGTATTAGGTAAGGCTTCA +
Preference number: 6 (lower is better)
Translates to: VQVFMSIPGPVLHLA*ALPLALPLVLGKAS
Trigger: TGAAGCCTTACCTAATACTAGAGGTAAGGCTAGGGGCAAAGCCAAAGCCAAGTGTAAGACAGGGCCTGGGATGGACATGAAAACCTGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS CAA 90 bp GGTTGTGTACAGGTTTTCATGTCCATCCCAGGCCCTGTCTTACACTaGGCTTTGGCTTTGCCCCTAGCCTTACCTCTAGTATTAGGTAAG +
Preference number: 6 (lower is better)
Translates to: GCVQVFMSIPGPVLH*ALALPLALPLVLGK
Trigger: CTTACCTAATACTAGAGGTAAGGCTAGGGGCAAAGCCAAAGCCAAGTGTAAGACAGGGCCTGGGATGGACATGAAAACCTGTACACAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS CAA 90 bp GGTTTGTTTTCTGGACTCATCTTCAACTGGGAAGCTGGCCTCACTTaGGTGTGCAAACTTAGTTTCCGACCAGATCATGGCTCCATCCCA +
Preference number: 6 (lower is better)
Translates to: GLFSGLIFNWEAGLT*VCKLSFRPDHGSIP
Trigger: TGGGATGGAGCCATGATCTGGTCGGAAACTAAGTTTGCACACCAAAGTGAGGCCAGCTTCCCAGTTGAAGATGAGTCCAGAAAACAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS GCA 72 bp TACTTCAGCCCTAGGCCCACTTCTTGCTCCAGTTTCTaGTCCAATCTCGACTTGGGGTTTAGTCTTAATCTC +
Preference number: 6 (lower is better)
Translates to: YFSPRPTSCSSF*SNLDLGFSLNL
Trigger: GAGATTAAGACTAAACCCCAAGTCGAGATTGGAGCAGAAACTGGAGCAAGAAGTGGGCCTAGGGCTGAAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000423738.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS GCA 72 bp AACCAGCGCCCAAGCTTTAGCCTTGGTCTGTGTCACTaGTTCTTTCTTAACTATTTTGCCAGCCTCAGCATC +
Preference number: 6 (lower is better)
Translates to: NQRPSFSLGLCH*FFLNYFASLSI
Trigger: GATGCTGAGGCTGGCAAAATAGTTAAGAAAGAAGCAGTGACACAGACCAAGGCTAAAGCTTGGGCGCTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000423738.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS CCA 72 bp TTGGGATCAACACAGTCTCTTCCAGAGCTCTTGTCTTaGTTTCATCCACAATTCCAGTCTTGTTCGTGGCCC +
Preference number: 6 (lower is better)
Translates to: LGSTQSLPELLS*FHPQFQSCSWP
Trigger: GGGCCACGAACAAGACTGGAATTGTGGATGAAACCAAGACAAGAGCTCTGGAAGAGACTGTGTTGATCCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS CAA 72 bp CTTGGGATCAACACAGTCTCTTCCAGAGCTCTTGTCTaGGTTTCATCCACAATTCCAGTCTTGTTCGTGGCC +
Preference number: 6 (lower is better)
Translates to: LGINTVSSRALV*VSSTIPVLFVA
Trigger: GGCCACGAACAAGACTGGAATTGTGGATGAAACCAAGACAAGAGCTCTGGAAGAGACTGTGTTGATCCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS CAA 90 bp AACCAAGACCCTATATCAACTCCACCAGCAGCCTCAAACTTATCCTaGATGCTGGTGTTATCCCCAGCTCCAGACTCAAAACTGGCATCT +
Preference number: 6 (lower is better)
Translates to: NQDPISTPPAASNLS*MLVLSPAPDSKLAS
Trigger: AGATGCCAGTTTTGAGTCTGGAGCTGGGGATAACACCAGCATCAAGGATAAGTTTGAGGCTGCTGGTGGAGTTGATATAGGGTCTTGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS TCA 72 bp CTATATCAACTCCACCAGCAGCCTCAAACTTATCCTTaGTGCTGGTGTTATCCCCAGCTCCAGACTCAAAAC +
Preference number: 6 (lower is better)
Translates to: LYQLHQQPQTYP*CWCYPQLQTQN
Trigger: GTTTTGAGTCTGGAGCTGGGGATAACACCAGCATCAAGGATAAGTTTGAGGCTGCTGGTGGAGTTGATATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS CCA 72 bp TCTTTCTTAACTATTTTGCCAGCCTCAGCATCAGTTTaGGTCACTGCTTCTTTCATGGCCACTTCCCTGGCT +
Preference number: 6 (lower is better)
Translates to: SFLTILPASASV*VTASFMATSLA
Trigger: AGCCAGGGAAGTGGCCATGAAAGAAGCAGTGACCCAAACTGATGCTGAGGCTGGCAAAATAGTTAAGAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000423738.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS CAA 72 bp CCTATATCAACTCCACCAGCAGCCTCAAACTTATCCTaGATGCTGGTGTTATCCCCAGCTCCAGACTCAAAA +
Preference number: 6 (lower is better)
Translates to: PISTPPAASNLS*MLVLSPAPDSK
Trigger: TTTTGAGTCTGGAGCTGGGGATAACACCAGCATCAAGGATAAGTTTGAGGCTGCTGGTGGAGTTGATATAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS CAA 72 bp ATGCTCTTGGGATCAACACAGTCTCTTCCAGAGCTCTaGTCTTGGTTTCATCCACAATTCCAGTCTTGTTCG +
Preference number: 6 (lower is better)
Translates to: MLLGSTQSLPEL*SWFHPQFQSCS
Trigger: CGAACAAGACTGGAATTGTGGATGAAACCAAGACAAGAGCTCTGGAAGAGACTGTGTTGATCCCAAGAGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354842.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS CAA 90 bp CCAGGGACCATGTACGGATATATGCCTCTTGACTCAGATGACTTTTaGGCTTTAGCCTTAGGTGCAGATTTGTCCTCACTTGTGTTTTCA +
Preference number: 6 (lower is better)
Translates to: PGTMYGYMPLDSDDF*ALALGADLSSLVFS
Trigger: TGAAAACACAAGTGAGGACAAATCTGCACCTAAGGCTAAAGCCAAAAAGTCATCTGAGTCAAGAGGCATATATCCGTACATGGTCCCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423738.4
CDS CCA 72 bp TTAGTCTTAATCTCTGCTTCATTTATGGCCAAGGTCTaGCTCTGTACCCCAACCACAGTCTCCATCTTAACT +
Preference number: 6 (lower is better)
Translates to: LVLISASFMAKV*LCTPTTVSILT
Trigger: AGTTAAGATGGAGACTGTGGTTGGGGTACAGAGCCAGACCTTGGCCATAAATGAAGCAGAGATTAAGACTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354842.4
ENST00000423738.4
ENST00000433011.5
ENST00000452188.5
ENST00000455331.5
CDS TCA 72 bp CTAACTGGACCGTTTGTAACACAAAGGATAAATGCTTaGTGTGATGGGTACCCCATTCTCCATGAGGTGATT +
Preference number: 6 (lower is better)
Translates to: LTGPFVTQRINA*CDGYPILHEVI
Trigger: AATCACCTCATGGAGAATGGGGTACCCATCACATCAAGCATTTATCCTTTGTGTTACAAACGGTCCAGTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431677.1
CDS CAA 72 bp TTCTTGCTAAAAATGTTAATCAGTGATGTTGGTGCATaGGCAATGAGCAAGTCTTTTGTCATAGATGGATTT +
Preference number: 6 (lower is better)
Translates to: FLLKMLISDVGA*AMSKSFVIDGF
Trigger: AAATCCATCTATGACAAAAGACTTGCTCATTGCCAATGCACCAACATCACTGATTAACATTTTTAGCAAGAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423738.4