RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ARL6IP4 (Homo sapiens)

Ensembl gene IDs: ENSG00000182196

Ensembl transcript IDs: ENST00000315580.10, ENST00000315580.9, ENST00000357866.4, ENST00000392433.3, ENST00000392435.6, ENST00000392435.7, ENST00000412505.6, ENST00000413381.6, ENST00000426960.6, ENST00000439686.6, ENST00000442210.2, ENST00000453766.6, ENST00000453766.7, ENST00000454885.6, ENST00000456762.2, ENST00000456762.3, ENST00000536073.1, ENST00000536502.5, ENST00000539576.5, ENST00000539770.5, ENST00000539770.6, ENST00000540382.5, ENST00000540708.5, ENST00000542099.5, ENST00000543566.5, ENST00000543566.6

Found 252 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGCACCCATCAGGCTTCCCACTGGCACCCTGAAACCTGCCCAGGCTaGGCCGCCAGCGTCGTCCACAGGCCTTGGCCAGCGGGGGCCCTC +
Preference number: 1 (lower is better)
Translates to: STHQASHWHPETCPG*AASVVHRPWPAGAL
Trigger: GAGGGCCCCCGCTGGCCAAGGCCTGTGGACGACGCTGGCGGCCCAGCCTGGGCAGGTTTCAGGGTGCCAGTGGGAAGCCTGATGGGTGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539770.5
3UTR CCA 90 bp CCTGAAACCTGCCCAGGCTGGGCCGCCAGCGTCGTCCACAGGCCTTaGCCAGCGGGGGCCCTCAGGGAAGCAACCCAGCTCGCATCTGGA +
Preference number: 1 (lower is better)
Translates to: PETCPGWAASVVHRP*PAGALREATQLASG
Trigger: TCCAGATGCGAGCTGGGTTGCTTCCCTGAGGGCCCCCGCTGGCCAAGGCCTGTGGACGACGCTGGCGGCCCAGCCTGGGCAGGTTTCAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539770.5
3UTR-3UTR CCA 90 bp GCCCAGGCTGGGCCGCCAGCGTCGTCCACAGGCCTTGGCCAGCGGGGGCCCTCAGAAACCTGCCCAGGCTaGGCCGCCAGCGTCGTCCAC +
Preference number: 2 (lower is better)
Translates to: AQAGPPASSTGLGQRGPSETCPG*AASVVH
Trigger: GTGGACGACGCTGGCGGCCCAGCCTGGGCAGGTTTC...TGAGGGCCCCCGCTGGCCAAGGCCTGTGGACGACGCTGGCGGCCCAGCCTGGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539770.5
3UTR-3UTR CCA 90 bp CTGGGCCGCCAGCGTCGTCCACAGGCCTTGGCCAGCGGGGGCCCTCAGGGAAGCAACCCAGCTCGCATCTaGAAGGCCAGGCAGTCCCCT +
Preference number: 2 (lower is better)
Translates to: LGRQRRPQALASGGPQGSNPARI*KARQSP
Trigger: AGGGGACTGCCTGGCCTTCCAGATGCGAGCTGGGTT...GCTTCCCTGAGGGCCCCCGCTGGCCAAGGCCTGTGGACGACGCTGGCGGCCCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000456762.2
ENST00000539770.5
3UTR-3UTR GCA 90 bp CCGCCAGCGTCGTCCACAGGCCTTGGCCAGCGGGGGCCCTCAGGGAAGCAACCCTCCCCTCGGGTGGCTTaGTGGGGAAGAAAGCACACA +
Preference number: 2 (lower is better)
Translates to: PPASSTGLGQRGPSGKQPSPRVA*WGRKHT
Trigger: TGTGTGCTTTCTTCCCCAGCAAGCCACCCGAGGGGA...GGGTTGCTTCCCTGAGGGCCCCCGCTGGCCAAGGCCTGTGGACGACGCTGGCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000456762.2
3UTR-3UTR CCA 90 bp TGGGCTGGGCCAGAGACCAATCCACGGGGGAAAGGCCACCAGCACCCATCAGGCGAAACCTGCCCAGGCTaGGCCGCCAGCGTCGTCCAC +
Preference number: 2 (lower is better)
Translates to: WAGPETNPRGKGHQHPSGETCPG*AASVVH
Trigger: GTGGACGACGCTGGCGGCCCAGCCTGGGCAGGTTTC...GCCTGATGGGTGCTGGTGGCCTTTCCCCCGTGGATTGGTCTCTGGCCCAGCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000315580.9
ENST00000412505.6
ENST00000453766.6
ENST00000454885.6
ENST00000539770.5
ENST00000543566.5
3UTR-3UTR CCA 90 bp AGAGACTGGGCTGGGCCAGAGACCAATCCACGGGGGAAAGGCCACCAGCACCCAGAAACCTGCCCAGGCTaGGCCGCCAGCGTCGTCCAC +
Preference number: 2 (lower is better)
Translates to: RDWAGPETNPRGKGHQHPETCPG*AASVVH
Trigger: GTGGACGACGCTGGCGGCCCAGCCTGGGCAGGTTTC...TGGGTGCTGGTGGCCTTTCCCCCGTGGATTGGTCTCTGGCCCAGCCCAGTCTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000315580.9
ENST00000412505.6
ENST00000453766.6
ENST00000454885.6
ENST00000539770.5
ENST00000543566.5
3UTR-3UTR CCA 90 bp CGCCAGCGTCGTCCACAGGCCTTGGCCAGCGGGGGCCCTCAGGGAAGCAACCCACCTCGGGTGGCTTGCTaGGGAAGAAAGCACACAGGA +
Preference number: 2 (lower is better)
Translates to: RQRRPQALASGGPQGSNPPRVAC*GRKHTG
Trigger: TCCTGTGTGCTTTCTTCCCCAGCAAGCCACCCGAGG...TGGGTTGCTTCCCTGAGGGCCCCCGCTGGCCAAGGCCTGTGGACGACGCTGGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456762.2
3UTR-3UTR CCA 90 bp AGGGGGCCTTTAATAGCTGAGAAGTGCTGCTCTTTCAGATGGGGGTGCCAAGCAGTCGTCCACAGGCCTTaGCCAGCGGGGGCCCTCAGG +
Preference number: 2 (lower is better)
Translates to: RGPLIAEKCCSFRWGCQAVVHRP*PAGALR
Trigger: CCTGAGGGCCCCCGCTGGCCAAGGCCTGTGGACGAC...TGCTTGGCACCCCCATCTGAAAGAGCAGCACTTCTCAGCTATTAAAGGCCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000539770.5
3UTR CAA 90 bp TCTCCCTTAATAAGCCTGGTGCGCCCCGTCTCAGGGTCCACCACCTaGCGGATGATGCTCTGCTGTGCTTCCGCCTTCTCCTTGCCCTTC +
Preference number: 2 (lower is better)
Translates to: SPLISLVRPVSGSTT*RMMLCCASAFSLPF
Trigger: GAAGGGCAAGGAGAAGGCGGAAGCACAGCAGAGCATCATCCGCAAGGTGGTGGACCCTGAGACGGGGCGCACCAGGCTTATTAAGGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539770.5
3UTR-3UTR CCA 90 bp TCCAGGGGGCCTTTAATAGCTGAGAAGTGCTGCTCTTTCAGATGGGGGTGCCAAGAAACCTGCCCAGGCTaGGCCGCCAGCGTCGTCCAC +
Preference number: 2 (lower is better)
Translates to: SRGPLIAEKCCSFRWGCQETCPG*AASVVH
Trigger: GTGGACGACGCTGGCGGCCCAGCCTGGGCAGGTTTC...TTGGCACCCCCATCTGAAAGAGCAGCACTTCTCAGCTATTAAAGGCCCCCTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000315580.9
ENST00000453766.6
ENST00000454885.6
ENST00000539770.5
ENST00000543566.5
3UTR-3UTR CCA 90 bp AGGGGGCCTTTAATAGCTGAGAAGTGCTGCTCTTTCAGATGGGGGTGCCAAGCAGAAACCTGCCCAGGCTaGGCCGCCAGCGTCGTCCAC +
Preference number: 2 (lower is better)
Translates to: RGPLIAEKCCSFRWGCQAETCPG*AASVVH
Trigger: GTGGACGACGCTGGCGGCCCAGCCTGGGCAGGTTTC...TGCTTGGCACCCCCATCTGAAAGAGCAGCACTTCTCAGCTATTAAAGGCCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000315580.9
ENST00000453766.6
ENST00000454885.6
ENST00000539770.5
ENST00000543566.5
3UTR-3UTR CCA 90 bp TCCAGGGGGCCTTTAATAGCTGAGAAGTGCTGCTCTTTCAGATGGGGGTGCCAAGAGAAGAGACTGGGCTaGGCCAGAGACCAATCCACG +
Preference number: 2 (lower is better)
Translates to: SRGPLIAEKCCSFRWGCQEKRLG*ARDQST
Trigger: CGTGGATTGGTCTCTGGCCCAGCCCAGTCTCTTCTC...TTGGCACCCCCATCTGAAAGAGCAGCACTTCTCAGCTATTAAAGGCCCCCTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000315580.9
ENST00000453766.6
ENST00000454885.6
ENST00000539770.5
ENST00000543566.5
3UTR-3UTR CCA 90 bp AGGGGGCCTTTAATAGCTGAGAAGTGCTGCTCTTTCAGATGGGGGTGCCAAGCAGAGAAGAGACTGGGCTaGGCCAGAGACCAATCCACG +
Preference number: 2 (lower is better)
Translates to: RGPLIAEKCCSFRWGCQAEKRLG*ARDQST
Trigger: CGTGGATTGGTCTCTGGCCCAGCCCAGTCTCTTCTC...TGCTTGGCACCCCCATCTGAAAGAGCAGCACTTCTCAGCTATTAAAGGCCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000315580.9
ENST00000453766.6
ENST00000454885.6
ENST00000539770.5
ENST00000543566.5
3UTR-3UTR TCA 90 bp ATCTCTCTGTGTCGTTCTTTGGTTACGATTTCCTCTAGGACCTCGCCATCTCCCCCACCACCTTGCGGATaGTGCTCTGCTGTGCTTCCG +
Preference number: 2 (lower is better)
Translates to: ISLCRSLVTISSRTSPSPPPPCG*CSAVLP
Trigger: CGGAAGCACAGCAGAGCATCATCCGCAAGGTGGTGG...GGGAGATGGCGAGGTCCTAGAGGAAATCGTAACCAAAGAACGACACAGAGAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539770.5
3UTR-3UTR CCA 90 bp CGGGTGGCTTGCTTGTTGATCTCTCTGTGTCGTTCTTTGGTTACGATTTCCTCTAACCCAGCTCGCATCTaGAAGGCCAGGCAGTCCCCT +
Preference number: 2 (lower is better)
Translates to: RVACLLISLCRSLVTISSNPARI*KARQSP
Trigger: AGGGGACTGCCTGGCCTTCCAGATGCGAGCTGGGTT...AGAGGAAATCGTAACCAAAGAACGACACAGAGAGATCAACAAGCAAGCCACCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539770.5
3UTR CAA 90 bp CAGTCCCCTCGGGTGGCTTGCTTGTTGATCTCTCTGTGTCGTTCTTaGGTTACGATTTCCTCTAGGACCTCGCCATCTCCCTTAATAAGC +
Preference number: 2 (lower is better)
Translates to: QSPRVACLLISLCRS*VTISSRTSPSPLIS
Trigger: GCTTATTAAGGGAGATGGCGAGGTCCTAGAGGAAATCGTAACCAAAGAACGACACAGAGAGATCAACAAGCAAGCCACCCGAGGGGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539770.5
3UTR CCA 72 bp CAGGCTTCCCACTGGCACCCTGAAACCTGCCCAGGCTaGGCCGCCAGCGTCGTCCACAGGCCTTGGCCAGCG +
Preference number: 3 (lower is better)
Translates to: QASHWHPETCPG*AASVVHRPWPA
Trigger: CGCTGGCCAAGGCCTGTGGACGACGCTGGCGGCCCAGCCTGGGCAGGTTTCAGGGTGCCAGTGGGAAGCCTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000315580.9
ENST00000412505.6
ENST00000426960.6
ENST00000453766.6
ENST00000454885.6
ENST00000539770.5
ENST00000543566.5
3UTR CCA 72 bp AGCGGGGGCCCTCAGGGAAGCAACCCAGCTCGCATCTaGAAGGCCAGGCAGTCCCCTCGGGTGGCTTGCTGG +
Preference number: 3 (lower is better)
Translates to: SGGPQGSNPARI*KARQSPRVACW
Trigger: CCAGCAAGCCACCCGAGGGGACTGCCTGGCCTTCCAGATGCGAGCTGGGTTGCTTCCCTGAGGGCCCCCGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392435.6
ENST00000456762.2
3UTR CCA 72 bp AGCGGGGGCCCTCAGGGAAGCAACCCAGCTCGCATCTaGAAGGCCAGGCAGTCCCCTCGGGTGGCTTGCTTG +
Preference number: 3 (lower is better)
Translates to: SGGPQGSNPARI*KARQSPRVACL
Trigger: CAAGCAAGCCACCCGAGGGGACTGCCTGGCCTTCCAGATGCGAGCTGGGTTGCTTCCCTGAGGGCCCCCGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539770.5
3UTR TCA 72 bp TGGTGCGCCCCGTCTCAGGGTCCACCACCTTGCGGATaGTGCTCTGCTGTGCTTCCGCCTTCTCCTTGCCCT +
Preference number: 3 (lower is better)
Translates to: WCAPSQGPPPCG*CSAVLPPSPCP
Trigger: AGGGCAAGGAGAAGGCGGAAGCACAGCAGAGCATCATCCGCAAGGTGGTGGACCCTGAGACGGGGCGCACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539770.5
3UTR-3UTR CAA 90 bp TCGCATCTGGAAGGCCAGGCAGTCCCCTCGGGTGGCTTGCTTGTTGATCTCTCTTCAGGGTCCACCACCTaGCGGATGATGCTCTGCTGT +
Preference number: 3 (lower is better)
Translates to: SHLEGQAVPSGGLLVDLSSGSTT*RMMLCC
Trigger: ACAGCAGAGCATCATCCGCAAGGTGGTGGACCCTGA...AGAGAGATCAACAAGCAAGCCACCCGAGGGGACTGCCTGGCCTTCCAGATGCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539770.5
3UTR GCA 72 bp GAAAGTCTATCCAGGGGGCCTTTAATAGCTGAGAAGTaGTGCTCTTTCAGATGGGGGTGCCAAGCAGGCCGG +
Preference number: 3 (lower is better)
Translates to: ESLSRGPLIAEK*CSFRWGCQAGR
Trigger: CCGGCCTGCTTGGCACCCCCATCTGAAAGAGCAGCACTTCTCAGCTATTAAAGGCCCCCTGGATAGACTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000543566.5
3UTR-3UTR CAA 90 bp AGGGGGCCTTTAATAGCTGAGAAGTGCTGCTCTTTCAGATGGGGGTGCCAAGCACCTCGGGTGGCTTGCTaGTTGATCTCTCTGTGTCGT +
Preference number: 3 (lower is better)
Translates to: RGPLIAEKCCSFRWGCQAPRVAC*LISLCR
Trigger: ACGACACAGAGAGATCAACAAGCAAGCCACCCGAGG...TGCTTGGCACCCCCATCTGAAAGAGCAGCACTTCTCAGCTATTAAAGGCCCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000539770.5
CDS-3UTR TCA 90 bp ACCTGCCCAGGCTGGGCCGCCAGCGTCGTCCACAGGCCTTGGCCAGCGGGGGCCTTGCGGGAGCCGACGTaGGCCATGGCGCCGCGGGGA +
Preference number: 4 (lower is better)
Translates to: TCPGWAASVVHRPWPAGALREPT*AMAPRG
Trigger: TCCCCGCGGCGCCATGGCTCACGTCGGCTCCCGCAA...GGCCCCCGCTGGCCAAGGCCTGTGGACGACGCTGGCGGCCCAGCCTGGGCAGGT
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426960.6
CDS-3UTR CCA 90 bp ACCTGCCCAGGCTGGGCCGCCAGCGTCGTCCACAGGCCTTGGCCAGCGGGGGCCAGCCGACGTGAGCCATaGCGCCGCGGGCCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: TCPGWAASVVHRPWPAGASRREP*RRGPPA
Trigger: GGCTGGAGGCCCGCGGCGCCATGGCTCACGTCGGCT...GGCCCCCGCTGGCCAAGGCCTGTGGACGACGCTGGCGGCCCAGCCTGGGCAGGT
77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412505.6
CDS-3UTR TCA 90 bp AAACCTGCCCAGGCTGGGCCGCCAGCGTCGTCCACAGGCCTTGGCCAGCGGGGGTTGCGGGAGCCGACGTaGGCCATGGCGCCGCGGGCC +
Preference number: 4 (lower is better)
Translates to: KPAQAGPPASSTGLGQRGLREPT*AMAPRA
Trigger: GGCCCGCGGCGCCATGGCTCACGTCGGCTCCCGCAA...CCCCCGCTGGCCAAGGCCTGTGGACGACGCTGGCGGCCCAGCCTGGGCAGGTTT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412505.6
ENST00000454885.6
CDS-3UTR GCA 90 bp ACCTGCCCAGGCTGGGCCGCCAGCGTCGTCCACAGGCCTTGGCCAGCGGGGGCCGTCCCCGGGACCGGCTaGGACTCCTCGAGCGCTTGC +
Preference number: 4 (lower is better)
Translates to: TCPGWAASVVHRPWPAGAVPGTG*DSSSAC
Trigger: GCAAGCGCTCGAGGAGTCGCAGCCGGTCCCGGGGAC...GGCCCCCGCTGGCCAAGGCCTGTGGACGACGCTGGCGGCCCAGCCTGGGCAGGT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000412505.6
ENST00000426960.6
ENST00000454885.6
CDS-3UTR CCA 90 bp ACCTGCCCAGGCTGGGCCGCCAGCGTCGTCCACAGGCCTTGGCCAGCGGGGGCCGTCGTCCACAGGCCTTaGCCAGCGGGGGCCCTCAGG +
Preference number: 4 (lower is better)
Translates to: TCPGWAASVVHRPWPAGAVVHRP*PAGALR
Trigger: CCTGAGGGCCCCCGCTGGCCAAGGCCTGTGGACGAC...GGCCCCCGCTGGCCAAGGCCTGTGGACGACGCTGGCGGCCCAGCCTGGGCAGGT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000412505.6
ENST00000426960.6
ENST00000454885.6
CDS-3UTR CCA 90 bp ACCTGCCCAGGCTGGGCCGCCAGCGTCGTCCACAGGCCTTGGCCAGCGGGGGCCAGCCGACGTGAGCCATaGCGCCGCGGGGACTGCGAG +
Preference number: 4 (lower is better)
Translates to: TCPGWAASVVHRPWPAGASRREP*RRGDCE
Trigger: CTCGCAGTCCCCGCGGCGCCATGGCTCACGTCGGCT...GGCCCCCGCTGGCCAAGGCCTGTGGACGACGCTGGCGGCCCAGCCTGGGCAGGT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426960.6
CDS-3UTR GCA 90 bp AACCTGCCCAGGCTGGGCCGCCAGCGTCGTCCACAGGCCTTGGCCAGCGGGGGCTGGCGCCGCGGGGACTaGGAGCTCCAGACTGAGGCG +
Preference number: 4 (lower is better)
Translates to: NLPRLGRQRRPQALASGGWRRGD*ELQTEA
Trigger: CGCCTCAGTCTGGAGCTCGCAGTCCCCGCGGCGCCA...GCCCCCGCTGGCCAAGGCCTGTGGACGACGCTGGCGGCCCAGCCTGGGCAGGTT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426960.6
CDS-3UTR CCA 90 bp AACCTGCCCAGGCTGGGCCGCCAGCGTCGTCCACAGGCCTTGGCCAGCGGGGGCGCTGATCGGTGCCACTaGTCCAGCGAGGGGCCCGGC +
Preference number: 4 (lower is better)
Translates to: NLPRLGRQRRPQALASGGADRCH*SSEGPG
Trigger: GCCGGGCCCCTCGCTGGACCAGTGGCACCGATCAGC...GCCCCCGCTGGCCAAGGCCTGTGGACGACGCTGGCGGCCCAGCCTGGGCAGGTT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426960.6
ENST00000454885.6
CDS-3UTR CCA 90 bp AACCTGCCCAGGCTGGGCCGCCAGCGTCGTCCACAGGCCTTGGCCAGCGGGGGCCCGGCTCCAAACCCCTaGGAACTGGCCGCCGTCCGC +
Preference number: 4 (lower is better)
Translates to: NLPRLGRQRRPQALASGGPAPNP*ELAAVR
Trigger: GCGGACGGCGGCCAGTTCCCAGGGGTTTGGAGCCGG...GCCCCCGCTGGCCAAGGCCTGTGGACGACGCTGGCGGCCCAGCCTGGGCAGGTT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454885.6
CDS-3UTR TCA 90 bp ACCTGCCCAGGCTGGGCCGCCAGCGTCGTCCACAGGCCTTGGCCAGCGGGGGCCCTGCGAGCTCCAGACTaGGGCGCCCTGGTCTTTCCG +
Preference number: 4 (lower is better)
Translates to: TCPGWAASVVHRPWPAGALRAPD*GALVFP
Trigger: CGGAAAGACCAGGGCGCCTCAGTCTGGAGCTCGCAG...GGCCCCCGCTGGCCAAGGCCTGTGGACGACGCTGGCGGCCCAGCCTGGGCAGGT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426960.6
CDS-3UTR GCA 90 bp ACCTGCCCAGGCTGGGCCGCCAGCGTCGTCCACAGGCCTTGGCCAGCGGGGGCCTCCCCAGCTGATCGGTaGCACTGGTCCAGCGAGGGG +
Preference number: 4 (lower is better)
Translates to: TCPGWAASVVHRPWPAGASPADR*HWSSEG
Trigger: CCCCTCGCTGGACCAGTGGCACCGATCAGCTGGGGA...GGCCCCCGCTGGCCAAGGCCTGTGGACGACGCTGGCGGCCCAGCCTGGGCAGGT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426960.6
ENST00000454885.6
CDS-3UTR CCA 90 bp AAACCTGCCCAGGCTGGGCCGCCAGCGTCGTCCACAGGCCTTGGCCAGCGGGGGGTCGTCCACAGGCCTTaGCCAGCGGGGGCCCTCAGG +
Preference number: 4 (lower is better)
Translates to: KPAQAGPPASSTGLGQRGVVHRP*PAGALR
Trigger: CCTGAGGGCCCCCGCTGGCCAAGGCCTGTGGACGAC...CCCCCGCTGGCCAAGGCCTGTGGACGACGCTGGCGGCCCAGCCTGGGCAGGTTT
73% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000412505.6
ENST00000426960.6
ENST00000454885.6
CDS-3UTR CCA 90 bp ACCTGCCCAGGCTGGGCCGCCAGCGTCGTCCACAGGCCTTGGCCAGCGGGGGCCCAGACTGAGGCGCCCTaGTCTTTCCGACGCGCCCAC +
Preference number: 4 (lower is better)
Translates to: TCPGWAASVVHRPWPAGAQTEAP*SFRRAH
Trigger: GTGGGCGCGTCGGAAAGACCAGGGCGCCTCAGTCTG...GGCCCCCGCTGGCCAAGGCCTGTGGACGACGCTGGCGGCCCAGCCTGGGCAGGT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426960.6
CDS-3UTR TCA 90 bp ACCTGCCCAGGCTGGGCCGCCAGCGTCGTCCACAGGCCTTGGCCAGCGGGGGCCGACGCGCCCACCCAGTaGCTCAGAGGTCGCAAACTC +
Preference number: 4 (lower is better)
Translates to: TCPGWAASVVHRPWPAGADAPTQ*LRGRKL
Trigger: GAGTTTGCGACCTCTGAGTCACTGGGTGGGCGCGTC...GGCCCCCGCTGGCCAAGGCCTGTGGACGACGCTGGCGGCCCAGCCTGGGCAGGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426960.6
CDS-3UTR TCA 90 bp AACCTGCCCAGGCTGGGCCGCCAGCGTCGTCCACAGGCCTTGGCCAGCGGGGGCCGCTGCCTTTCGTTCTaGCGCCCCAGGTTCCGTCCC +
Preference number: 4 (lower is better)
Translates to: NLPRLGRQRRPQALASGGRCLSF*RPRFRP
Trigger: GGGACGGAACCTGGGGCGTCAGAACGAAAGGCAGCG...GCCCCCGCTGGCCAAGGCCTGTGGACGACGCTGGCGGCCCAGCCTGGGCAGGTT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454885.6
CDS-3UTR GCA 90 bp AACCTGCCCAGGCTGGGCCGCCAGCGTCGTCCACAGGCCTTGGCCAGCGGGGGCGACTCCTCGAGCGCTTaGGGGAGCCGACGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: NLPRLGRQRRPQALASGGDSSSA*GSRREP
Trigger: TGGCTCACGTCGGCTCCCGCAAGCGCTCGAGGAGTC...GCCCCCGCTGGCCAAGGCCTGTGGACGACGCTGGCGGCCCAGCCTGGGCAGGTT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000412505.6
ENST00000426960.6
ENST00000454885.6
CDS-3UTR GCA 90 bp AACCTGCCCAGGCTGGGCCGCCAGCGTCGTCCACAGGCCTTGGCCAGCGGGGGCTCCCCAGCTGATCGGTaGCACTGGTCCAGCGAGGGG +
Preference number: 4 (lower is better)
Translates to: NLPRLGRQRRPQALASGGSPADR*HWSSEG
Trigger: CCCCTCGCTGGACCAGTGGCACCGATCAGCTGGGGA...GCCCCCGCTGGCCAAGGCCTGTGGACGACGCTGGCGGCCCAGCCTGGGCAGGTT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426960.6
ENST00000454885.6
CDS-3UTR CCA 90 bp AAACCTGCCCAGGCTGGGCCGCCAGCGTCGTCCACAGGCCTTGGCCAGCGGGGGGAAACCTGCCCAGGCTaGGCCGCCAGCGTCGTCCAC +
Preference number: 4 (lower is better)
Translates to: KPAQAGPPASSTGLGQRGETCPG*AASVVH
Trigger: GTGGACGACGCTGGCGGCCCAGCCTGGGCAGGTTTC...CCCCCGCTGGCCAAGGCCTGTGGACGACGCTGGCGGCCCAGCCTGGGCAGGTTT
72% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000412505.6
ENST00000426960.6
ENST00000454885.6
CDS-3UTR TCA 90 bp AACCTGCCCAGGCTGGGCCGCCAGCGTCGTCCACAGGCCTTGGCCAGCGGGGGCCTCTTCCTCCCCAGCTaGTCGGTGCCACTGGTCCAG +
Preference number: 4 (lower is better)
Translates to: NLPRLGRQRRPQALASGGLFLPS*SVPLVQ
Trigger: CTGGACCAGTGGCACCGATCAGCTGGGGAGGAAGAG...GCCCCCGCTGGCCAAGGCCTGTGGACGACGCTGGCGGCCCAGCCTGGGCAGGTT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426960.6
ENST00000454885.6
CDS-3UTR TCA 90 bp AAACCTGCCCAGGCTGGGCCGCCAGCGTCGTCCACAGGCCTTGGCCAGCGGGGGCCACCACCTTGCGGATaGTGCTCTGCCGGGCATCCC +
Preference number: 4 (lower is better)
Translates to: KPAQAGPPASSTGLGQRGPPPCG*CSAGHP
Trigger: GGGATGCCCGGCAGAGCATCATCCGCAAGGTGGTGG...CCCCCGCTGGCCAAGGCCTGTGGACGACGCTGGCGGCCCAGCCTGGGCAGGTTT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426960.6
ENST00000454885.6
CDS-3UTR GCA 90 bp AAACCTGCCCAGGCTGGGCCGCCAGCGTCGTCCACAGGCCTTGGCCAGCGGGGGGACTCCTCGAGCGCTTaGGGGAGCCGACGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: KPAQAGPPASSTGLGQRGDSSSA*GSRREP
Trigger: TGGCTCACGTCGGCTCCCGCAAGCGCTCGAGGAGTC...CCCCCGCTGGCCAAGGCCTGTGGACGACGCTGGCGGCCCAGCCTGGGCAGGTTT
71% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000412505.6
ENST00000426960.6
ENST00000454885.6
CDS-3UTR GCA 90 bp AACCTGCCCAGGCTGGGCCGCCAGCGTCGTCCACAGGCCTTGGCCAGCGGGGGCGGCAGAGCCTCCACCTaGTGTGCTTCCGCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: NLPRLGRQRRPQALASGGGRAST*CASAFS
Trigger: GGAGAAGGCGGAAGCACAGCAGGTGGAGGCTCTGCC...GCCCCCGCTGGCCAAGGCCTGTGGACGACGCTGGCGGCCCAGCCTGGGCAGGTT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426960.6
ENST00000454885.6
CDS-3UTR CCA 90 bp ACCTGCCCAGGCTGGGCCGCCAGCGTCGTCCACAGGCCTTGGCCAGCGGGGGCCCTCATCCGTCAGGACTaGGCCATCCTCTTCCTCCCC +
Preference number: 4 (lower is better)
Translates to: TCPGWAASVVHRPWPAGALIRQD*AILFLP
Trigger: GGGGAGGAAGAGGATGGCCCAGTCCTGACGGATGAG...GGCCCCCGCTGGCCAAGGCCTGTGGACGACGCTGGCGGCCCAGCCTGGGCAGGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426960.6
ENST00000454885.6
CDS-3UTR CCA 90 bp ACCTGCCCAGGCTGGGCCGCCAGCGTCGTCCACAGGCCTTGGCCAGCGGGGGCCAACCCAGCTCGCATCTaGAAGGCCAGGCAGTCCCCT +
Preference number: 4 (lower is better)
Translates to: TCPGWAASVVHRPWPAGANPARI*KARQSP
Trigger: AGGGGACTGCCTGGCCTTCCAGATGCGAGCTGGGTT...GGCCCCCGCTGGCCAAGGCCTGTGGACGACGCTGGCGGCCCAGCCTGGGCAGGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000412505.6
ENST00000426960.6
ENST00000454885.6
CDS-3UTR CCA 90 bp ACCTGCCCAGGCTGGGCCGCCAGCGTCGTCCACAGGCCTTGGCCAGCGGGGGCCGGAGAAGGTGAGGCTTaGGATGTGGAGGCCGAGCAG +
Preference number: 4 (lower is better)
Translates to: TCPGWAASVVHRPWPAGAGEGEA*DVEAEQ
Trigger: CTGCTCGGCCTCCACATCCCAAGCCTCACCTTCTCC...GGCCCCCGCTGGCCAAGGCCTGTGGACGACGCTGGCGGCCCAGCCTGGGCAGGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454885.6
CDS-3UTR GCA 90 bp AACCTGCCCAGGCTGGGCCGCCAGCGTCGTCCACAGGCCTTGGCCAGCGGGGGCTTGCGGATGATGCTCTaGCGGGCATCCCACTCCTCC +
Preference number: 4 (lower is better)
Translates to: NLPRLGRQRRPQALASGGLRMML*RASHSS
Trigger: GGAGGAGTGGGATGCCCGGCAGAGCATCATCCGCAA...GCCCCCGCTGGCCAAGGCCTGTGGACGACGCTGGCGGCCCAGCCTGGGCAGGTT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426960.6
ENST00000454885.6
CDS-3UTR CCA 90 bp ACCTGCCCAGGCTGGGCCGCCAGCGTCGTCCACAGGCCTTGGCCAGCGGGGGCCTCTTCCGGCCATCACTaGAGGAAGAGGAGGAGGACG +
Preference number: 4 (lower is better)
Translates to: TCPGWAASVVHRPWPAGASSGHH*RKRRRT
Trigger: CGTCCTCCTCCTCTTCCTCCAGTGATGGCCGGAAGA...GGCCCCCGCTGGCCAAGGCCTGTGGACGACGCTGGCGGCCCAGCCTGGGCAGGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000412505.6
ENST00000426960.6
ENST00000454885.6
CDS-3UTR CCA 90 bp ACCTGCCCAGGCTGGGCCGCCAGCGTCGTCCACAGGCCTTGGCCAGCGGGGGCCCATCAGGCTTCCCACTaGCACCCTGAAACCTGCCCA +
Preference number: 4 (lower is better)
Translates to: TCPGWAASVVHRPWPAGAHQASH*HPETCP
Trigger: TGGGCAGGTTTCAGGGTGCCAGTGGGAAGCCTGATG...GGCCCCCGCTGGCCAAGGCCTGTGGACGACGCTGGCGGCCCAGCCTGGGCAGGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000412505.6
ENST00000426960.6
ENST00000454885.6
CDS-3UTR CCA 90 bp AACCTGCCCAGGCTGGGCCGCCAGCGTCGTCCACAGGCCTTGGCCAGCGGGGGCGTGAGGCTTGGGATGTaGAGGCCGAGCAGTTCCTCG +
Preference number: 4 (lower is better)
Translates to: NLPRLGRQRRPQALASGGVRLGM*RPSSSS
Trigger: CGAGGAACTGCTCGGCCTCCACATCCCAAGCCTCAC...GCCCCCGCTGGCCAAGGCCTGTGGACGACGCTGGCGGCCCAGCCTGGGCAGGTT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454885.6
CDS-3UTR GCA 90 bp ACCTGCCCAGGCTGGGCCGCCAGCGTCGTCCACAGGCCTTGGCCAGCGGGGGCCCTCCTCCGGGCCTTCTaGTTGCTTCTCTCTGTGATG +
Preference number: 4 (lower is better)
Translates to: TCPGWAASVVHRPWPAGALLRAF*LLLSVM
Trigger: CATCACAGAGAGAAGCAAGCAGAAGGCCCGGAGGAG...GGCCCCCGCTGGCCAAGGCCTGTGGACGACGCTGGCGGCCCAGCCTGGGCAGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454885.6
CDS-3UTR GCA 90 bp ACCTGCCCAGGCTGGGCCGCCAGCGTCGTCCACAGGCCTTGGCCAGCGGGGGCCTGGATTCGGGACTTCTaGTCATCCGTCAGGACTGGG +
Preference number: 4 (lower is better)
Translates to: TCPGWAASVVHRPWPAGAWIRDF*SSVRTG
Trigger: CCCAGTCCTGACGGATGAGCAGAAGTCCCGAATCCA...GGCCCCCGCTGGCCAAGGCCTGTGGACGACGCTGGCGGCCCAGCCTGGGCAGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426960.6
ENST00000454885.6
CDS-3UTR GCA 90 bp AAACCTGCCCAGGCTGGGCCGCCAGCGTCGTCCACAGGCCTTGGCCAGCGGGGGTTGCGGATGATGCTCTaGCGGGCATCCCACTCCTCC +
Preference number: 4 (lower is better)
Translates to: KPAQAGPPASSTGLGQRGLRMML*RASHSS
Trigger: GGAGGAGTGGGATGCCCGGCAGAGCATCATCCGCAA...CCCCCGCTGGCCAAGGCCTGTGGACGACGCTGGCGGCCCAGCCTGGGCAGGTTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426960.6
ENST00000454885.6
CDS-3UTR CCA 90 bp AAACCTGCCCAGGCTGGGCCGCCAGCGTCGTCCACAGGCCTTGGCCAGCGGGGGAACCCAGCTCGCATCTaGAAGGCCAGGCAGTCCCCT +
Preference number: 4 (lower is better)
Translates to: KPAQAGPPASSTGLGQRGNPARI*KARQSP
Trigger: AGGGGACTGCCTGGCCTTCCAGATGCGAGCTGGGTT...CCCCCGCTGGCCAAGGCCTGTGGACGACGCTGGCGGCCCAGCCTGGGCAGGTTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000412505.6
ENST00000426960.6
ENST00000454885.6
CDS-3UTR CCA 90 bp AACCTGCCCAGGCTGGGCCGCCAGCGTCGTCCACAGGCCTTGGCCAGCGGGGGCCATCAGGCTTCCCACTaGCACCCTGAAACCTGCCCA +
Preference number: 4 (lower is better)
Translates to: NLPRLGRQRRPQALASGGHQASH*HPETCP
Trigger: TGGGCAGGTTTCAGGGTGCCAGTGGGAAGCCTGATG...GCCCCCGCTGGCCAAGGCCTGTGGACGACGCTGGCGGCCCAGCCTGGGCAGGTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000412505.6
ENST00000426960.6
ENST00000454885.6
CDS-3UTR CCA 90 bp ACCTGCCCAGGCTGGGCCGCCAGCGTCGTCCACAGGCCTTGGCCAGCGGGGGCCTTCTCTCTTGGGATGTaGAGGCCGAGCAGTTCCTCG +
Preference number: 4 (lower is better)
Translates to: TCPGWAASVVHRPWPAGAFSLGM*RPSSSS
Trigger: CGAGGAACTGCTCGGCCTCCACATCCCAAGAGAGAA...GGCCCCCGCTGGCCAAGGCCTGTGGACGACGCTGGCGGCCCAGCCTGGGCAGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412505.6
ENST00000426960.6
CDS-3UTR CCA 90 bp ACCTGCCCAGGCTGGGCCGCCAGCGTCGTCCACAGGCCTTGGCCAGCGGGGGCCTGCTTGCTTCTCTCTTaGGATGTGGAGGCCGAGCAG +
Preference number: 4 (lower is better)
Translates to: TCPGWAASVVHRPWPAGACLLLS*DVEAEQ
Trigger: CTGCTCGGCCTCCACATCCCAAGAGAGAAGCAAGCA...GGCCCCCGCTGGCCAAGGCCTGTGGACGACGCTGGCGGCCCAGCCTGGGCAGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412505.6
ENST00000426960.6
CDS-3UTR CCA 90 bp AGAGACTGGGCTGGGCCAGAGACCAATCCACGGGGGAAAGGCCACCAGCACCCAGCCGTCCGCCGCGAGTaGCGTCTGGGGCGCTTTCCC +
Preference number: 4 (lower is better)
Translates to: RDWAGPETNPRGKGHQHPAVRRE*RLGRFP
Trigger: GGGAAAGCGCCCCAGACGCCACTCGCGGCGGACGGC...TGGGTGCTGGTGGCCTTTCCCCCGTGGATTGGTCTCTGGCCCAGCCCAGTCTCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454885.6
CDS-3UTR GCA 90 bp AGAGACTGGGCTGGGCCAGAGACCAATCCACGGGGGAAAGGCCACCAGCACCCAGTCCCCGGGACCGGCTaGGACTCCTCGAGCGCTTGC +
Preference number: 4 (lower is better)
Translates to: RDWAGPETNPRGKGHQHPVPGTG*DSSSAC
Trigger: GCAAGCGCTCGAGGAGTCGCAGCCGGTCCCGGGGAC...TGGGTGCTGGTGGCCTTTCCCCCGTGGATTGGTCTCTGGCCCAGCCCAGTCTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000412505.6
ENST00000454885.6
CDS-3UTR GCA 90 bp AACCTGCCCAGGCTGGGCCGCCAGCGTCGTCCACAGGCCTTGGCCAGCGGGGGCTCCGGGCCTTCTGCTTaGTTCTCTCTTGGGATGTGG +
Preference number: 4 (lower is better)
Translates to: NLPRLGRQRRPQALASGGSGPSA*FSLGMW
Trigger: CCACATCCCAAGAGAGAAGCAAGCAGAAGGCCCGGA...GCCCCCGCTGGCCAAGGCCTGTGGACGACGCTGGCGGCCCAGCCTGGGCAGGTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412505.6
ENST00000426960.6
CDS-3UTR GCA 90 bp AACCTGCCCAGGCTGGGCCGCCAGCGTCGTCCACAGGCCTTGGCCAGCGGGGGCCTCCTCCGGGCCTTCTaGTTGCTTCTCTCTTGGGAT +
Preference number: 4 (lower is better)
Translates to: NLPRLGRQRRPQALASGGLLRAF*LLLSWD
Trigger: ATCCCAAGAGAGAAGCAAGCAGAAGGCCCGGAGGAG...GCCCCCGCTGGCCAAGGCCTGTGGACGACGCTGGCGGCCCAGCCTGGGCAGGTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412505.6
ENST00000426960.6
CDS-3UTR CCA 90 bp AAGAGACTGGGCTGGGCCAGAGACCAATCCACGGGGGAAAGGCCACCAGCACCCGTCGTCCACAGGCCTTaGCCAGCGGGGGCCCTCAGG +
Preference number: 4 (lower is better)
Translates to: KRLGWARDQSTGERPPAPVVHRP*PAGALR
Trigger: CCTGAGGGCCCCCGCTGGCCAAGGCCTGTGGACGAC...GGGTGCTGGTGGCCTTTCCCCCGTGGATTGGTCTCTGGCCCAGCCCAGTCTCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000412505.6
ENST00000454885.6
CDS-3UTR CCA 90 bp AACCTGCCCAGGCTGGGCCGCCAGCGTCGTCCACAGGCCTTGGCCAGCGGGGGCTTCTCTCTTGGGATGTaGAGGCCGAGCAGTTCCTCG +
Preference number: 4 (lower is better)
Translates to: NLPRLGRQRRPQALASGGFSLGM*RPSSSS
Trigger: CGAGGAACTGCTCGGCCTCCACATCCCAAGAGAGAA...GCCCCCGCTGGCCAAGGCCTGTGGACGACGCTGGCGGCCCAGCCTGGGCAGGTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412505.6
ENST00000426960.6
CDS-3UTR CCA 90 bp AAGAGACTGGGCTGGGCCAGAGACCAATCCACGGGGGAAAGGCCACCAGCACCCGCCGCGAGTGGCGTCTaGGGCGCTTTCCCGCGCTCT +
Preference number: 4 (lower is better)
Translates to: KRLGWARDQSTGERPPAPAASGV*GAFPRS
Trigger: AGAGCGCGGGAAAGCGCCCCAGACGCCACTCGCGGC...GGGTGCTGGTGGCCTTTCCCCCGTGGATTGGTCTCTGGCCCAGCCCAGTCTCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454885.6
CDS-3UTR GCA 90 bp AACCTGCCCAGGCTGGGCCGCCAGCGTCGTCCACAGGCCTTGGCCAGCGGGGGCTCCCCTCGGGTGGCTTaGTTGTTGATCTCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: NLPRLGRQRRPQALASGGSPRVA*LLISLC
Trigger: ACACAGAGAGATCAACAAGCAAGCCACCCGAGGGGA...GCCCCCGCTGGCCAAGGCCTGTGGACGACGCTGGCGGCCCAGCCTGGGCAGGTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000412505.6
ENST00000426960.6
ENST00000454885.6
CDS-3UTR CCA 90 bp AACCTGCCCAGGCTGGGCCGCCAGCGTCGTCCACAGGCCTTGGCCAGCGGGGGCATGGGCTTCATGGCCTaGATTCGGGACTTCTGCTCA +
Preference number: 4 (lower is better)
Translates to: NLPRLGRQRRPQALASGGMGFMA*IRDFCS
Trigger: TGAGCAGAAGTCCCGAATCCAGGCCATGAAGCCCAT...GCCCCCGCTGGCCAAGGCCTGTGGACGACGCTGGCGGCCCAGCCTGGGCAGGTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426960.6
ENST00000454885.6
CDS-3UTR CCA 90 bp AACCTGCCCAGGCTGGGCCGCCAGCGTCGTCCACAGGCCTTGGCCAGCGGGGGCACTCCTCCTTGGTCATaGGCTTCATGGCCTGGATTC +
Preference number: 4 (lower is better)
Translates to: NLPRLGRQRRPQALASGGTPPWS*ASWPGF
Trigger: GAATCCAGGCCATGAAGCCCATGACCAAGGAGGAGT...GCCCCCGCTGGCCAAGGCCTGTGGACGACGCTGGCGGCCCAGCCTGGGCAGGTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426960.6
ENST00000454885.6
CDS-3UTR GCA 90 bp AAACCTGCCCAGGCTGGGCCGCCAGCGTCGTCCACAGGCCTTGGCCAGCGGGGGTCCCCTCGGGTGGCTTaGTTGTTGATCTCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: KPAQAGPPASSTGLGQRGSPRVA*LLISLC
Trigger: ACACAGAGAGATCAACAAGCAAGCCACCCGAGGGGA...CCCCCGCTGGCCAAGGCCTGTGGACGACGCTGGCGGCCCAGCCTGGGCAGGTTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000412505.6
ENST00000426960.6
ENST00000454885.6
CDS-3UTR CCA 90 bp AAACCTGCCCAGGCTGGGCCGCCAGCGTCGTCCACAGGCCTTGGCCAGCGGGGGATGGGCTTCATGGCCTaGATTCGGGACTTCTGCTCA +
Preference number: 4 (lower is better)
Translates to: KPAQAGPPASSTGLGQRGMGFMA*IRDFCS
Trigger: TGAGCAGAAGTCCCGAATCCAGGCCATGAAGCCCAT...CCCCCGCTGGCCAAGGCCTGTGGACGACGCTGGCGGCCCAGCCTGGGCAGGTTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426960.6
ENST00000454885.6
CDS-3UTR TCA 90 bp AGAGACTGGGCTGGGCCAGAGACCAATCCACGGGGGAAAGGCCACCAGCACCCACTCTTCCTCCCCAGCTaGTCGGTGCCACTGGTCCAG +
Preference number: 4 (lower is better)
Translates to: RDWAGPETNPRGKGHQHPLFLPS*SVPLVQ
Trigger: CTGGACCAGTGGCACCGATCAGCTGGGGAGGAAGAG...TGGGTGCTGGTGGCCTTTCCCCCGTGGATTGGTCTCTGGCCCAGCCCAGTCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454885.6
CDS-3UTR TCA 90 bp AAACCTGCCCAGGCTGGGCCGCCAGCGTCGTCCACAGGCCTTGGCCAGCGGGGGGGGTGGCTTGCTTGTTaGTCTCTCTGTGTCGTTCTT +
Preference number: 4 (lower is better)
Translates to: KPAQAGPPASSTGLGQRGGWLAC*SLCVVL
Trigger: AAGAACGACACAGAGAGATCAACAAGCAAGCCACCC...CCCCCGCTGGCCAAGGCCTGTGGACGACGCTGGCGGCCCAGCCTGGGCAGGTTT
64% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412505.6
ENST00000426960.6
ENST00000454885.6
CDS-3UTR TCA 90 bp TGGGCTGGGCCAGAGACCAATCCACGGGGGAAAGGCCACCAGCACCCATCAGGCCCACCACCTTGCGGATaGTGCTCTGCTGTGCTTCCG +
Preference number: 4 (lower is better)
Translates to: WAGPETNPRGKGHQHPSGPPPCG*CSAVLP
Trigger: CGGAAGCACAGCAGAGCATCATCCGCAAGGTGGTGG...GCCTGATGGGTGCTGGTGGCCTTTCCCCCGTGGATTGGTCTCTGGCCCAGCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412505.6
CDS-3UTR GCA 90 bp AGAGACTGGGCTGGGCCAGAGACCAATCCACGGGGGAAAGGCCACCAGCACCCAGGCAGAGCCTCCACCTaGTGTGCTTCCGCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: RDWAGPETNPRGKGHQHPGRAST*CASAFS
Trigger: GGAGAAGGCGGAAGCACAGCAGGTGGAGGCTCTGCC...TGGGTGCTGGTGGCCTTTCCCCCGTGGATTGGTCTCTGGCCCAGCCCAGTCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454885.6
CDS-3UTR TCA 90 bp AGGGGGCCTTTAATAGCTGAGAAGTGCTGCTCTTTCAGATGGGGGTGCCAAGCATTGCGGGAGCCGACGTaGGCCATGGCGCCGCGGGCC +
Preference number: 4 (lower is better)
Translates to: RGPLIAEKCCSFRWGCQALREPT*AMAPRA
Trigger: GGCCCGCGGCGCCATGGCTCACGTCGGCTCCCGCAA...TGCTTGGCACCCCCATCTGAAAGAGCAGCACTTCTCAGCTATTAAAGGCCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000454885.6
CDS-3UTR CCA 90 bp TGGGCTGGGCCAGAGACCAATCCACGGGGGAAAGGCCACCAGCACCCATCAGGCCATCAGGCTTCCCACTaGCACCCTGAAACCTGCCCA +
Preference number: 4 (lower is better)
Translates to: WAGPETNPRGKGHQHPSGHQASH*HPETCP
Trigger: TGGGCAGGTTTCAGGGTGCCAGTGGGAAGCCTGATG...GCCTGATGGGTGCTGGTGGCCTTTCCCCCGTGGATTGGTCTCTGGCCCAGCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412505.6
ENST00000454885.6
CDS-3UTR CCA 90 bp AGAGACTGGGCTGGGCCAGAGACCAATCCACGGGGGAAAGGCCACCAGCACCCATGCTGCTCTTTCAGATaGGGGTGCCAAGCAGGCCGG +
Preference number: 4 (lower is better)
Translates to: RDWAGPETNPRGKGHQHPCCSFR*GCQAGR
Trigger: CCGGCCTGCTTGGCACCCCCATCTGAAAGAGCAGCA...TGGGTGCTGGTGGCCTTTCCCCCGTGGATTGGTCTCTGGCCCAGCCCAGTCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454885.6
CDS-3UTR CCA 90 bp AAGAGACTGGGCTGGGCCAGAGACCAATCCACGGGGGAAAGGCCACCAGCACCCTCTTCCGGCCATCACTaGAGGAAGAGGAGGAGGACG +
Preference number: 4 (lower is better)
Translates to: KRLGWARDQSTGERPPAPSSGHH*RKRRRT
Trigger: CGTCCTCCTCCTCTTCCTCCAGTGATGGCCGGAAGA...GGGTGCTGGTGGCCTTTCCCCCGTGGATTGGTCTCTGGCCCAGCCCAGTCTCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412505.6
ENST00000454885.6
CDS-3UTR CCA 90 bp AGAGACTGGGCTGGGCCAGAGACCAATCCACGGGGGAAAGGCCACCAGCACCCATCTTCCGGCCATCACTaGAGGAAGAGGAGGAGGACG +
Preference number: 4 (lower is better)
Translates to: RDWAGPETNPRGKGHQHPSSGHH*RKRRRT
Trigger: CGTCCTCCTCCTCTTCCTCCAGTGATGGCCGGAAGA...TGGGTGCTGGTGGCCTTTCCCCCGTGGATTGGTCTCTGGCCCAGCCCAGTCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412505.6
ENST00000454885.6
CDS-3UTR CCA 90 bp AACCTGCCCAGGCTGGGCCGCCAGCGTCGTCCACAGGCCTTGGCCAGCGGGGGCCTCTGTGTCGTTCTTTaGTTACGATTTCCTCTAGGA +
Preference number: 4 (lower is better)
Translates to: NLPRLGRQRRPQALASGGLCVVL*LRFPLG
Trigger: TCCTAGAGGAAATCGTAACCAAAGAACGACACAGAG...GCCCCCGCTGGCCAAGGCCTGTGGACGACGCTGGCGGCCCAGCCTGGGCAGGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000412505.6
ENST00000426960.6
ENST00000454885.6
CDS-3UTR CCA 90 bp AGAGACTGGGCTGGGCCAGAGACCAATCCACGGGGGAAAGGCCACCAGCACCCAGAGAAGAGACTGGGCTaGGCCAGAGACCAATCCACG +
Preference number: 4 (lower is better)
Translates to: RDWAGPETNPRGKGHQHPEKRLG*ARDQST
Trigger: CGTGGATTGGTCTCTGGCCCAGCCCAGTCTCTTCTC...TGGGTGCTGGTGGCCTTTCCCCCGTGGATTGGTCTCTGGCCCAGCCCAGTCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412505.6
ENST00000454885.6
CDS-3UTR CCA 90 bp AAGAGACTGGGCTGGGCCAGAGACCAATCCACGGGGGAAAGGCCACCAGCACCCGAGAAGAGACTGGGCTaGGCCAGAGACCAATCCACG +
Preference number: 4 (lower is better)
Translates to: KRLGWARDQSTGERPPAPEKRLG*ARDQST
Trigger: CGTGGATTGGTCTCTGGCCCAGCCCAGTCTCTTCTC...GGGTGCTGGTGGCCTTTCCCCCGTGGATTGGTCTCTGGCCCAGCCCAGTCTCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412505.6
ENST00000454885.6
CDS-3UTR CCA 90 bp TCCAGGGGGCCTTTAATAGCTGAGAAGTGCTGCTCTTTCAGATGGGGGTGCCAAAGCCGACGTGAGCCATaGCGCCGCGGGCCGGCTCCA +
Preference number: 4 (lower is better)
Translates to: SRGPLIAEKCCSFRWGCQSRREP*RRGPAP
Trigger: TGGAGCCGGCCCGCGGCGCCATGGCTCACGTCGGCT...TTGGCACCCCCATCTGAAAGAGCAGCACTTCTCAGCTATTAAAGGCCCCCTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000454885.6
3UTR CAA 72 bp ATAAGCCTGGTGCGCCCCGTCTCAGGGTCCACCACCTaGCGGATGATGCTCTGCTGTGCTTCCGCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: ISLVRPVSGSTT*RMMLCCASAFS
Trigger: GGAGAAGGCGGAAGCACAGCAGAGCATCATCCGCAAGGTGGTGGACCCTGAGACGGGGCGCACCAGGCTTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539770.5
CDS-3UTR GCA 90 bp AGAGACTGGGCTGGGCCAGAGACCAATCCACGGGGGAAAGGCCACCAGCACCCATCCGGGCCTTCTGCTTaGTTCTCTCTTGGGATGTGG +
Preference number: 4 (lower is better)
Translates to: RDWAGPETNPRGKGHQHPSGPSA*FSLGMW
Trigger: CCACATCCCAAGAGAGAAGCAAGCAGAAGGCCCGGA...TGGGTGCTGGTGGCCTTTCCCCCGTGGATTGGTCTCTGGCCCAGCCCAGTCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412505.6
CDS-3UTR GCA 90 bp AAGAGACTGGGCTGGGCCAGAGACCAATCCACGGGGGAAAGGCCACCAGCACCCCTCCTCCGGGCCTTCTaGTTGCTTCTCTCTTGGGAT +
Preference number: 4 (lower is better)
Translates to: KRLGWARDQSTGERPPAPLLRAF*LLLSWD
Trigger: ATCCCAAGAGAGAAGCAAGCAGAAGGCCCGGAGGAG...GGGTGCTGGTGGCCTTTCCCCCGTGGATTGGTCTCTGGCCCAGCCCAGTCTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412505.6
CDS-3UTR CCA 90 bp AGGGGGCCTTTAATAGCTGAGAAGTGCTGCTCTTTCAGATGGGGGTGCCAAGCAGCTGATCGGTGCCACTaGTCCAGCGAGGGGCCCGGC +
Preference number: 4 (lower is better)
Translates to: RGPLIAEKCCSFRWGCQAADRCH*SSEGPG
Trigger: GCCGGGCCCCTCGCTGGACCAGTGGCACCGATCAGC...TGCTTGGCACCCCCATCTGAAAGAGCAGCACTTCTCAGCTATTAAAGGCCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000454885.6
CDS-3UTR CCA 90 bp AGAGACTGGGCTGGGCCAGAGACCAATCCACGGGGGAAAGGCCACCAGCACCCATGCTTGCTTCTCTCTTaGGATGTGGAGGCCGAGCAG +
Preference number: 4 (lower is better)
Translates to: RDWAGPETNPRGKGHQHPCLLLS*DVEAEQ
Trigger: CTGCTCGGCCTCCACATCCCAAGAGAGAAGCAAGCA...TGGGTGCTGGTGGCCTTTCCCCCGTGGATTGGTCTCTGGCCCAGCCCAGTCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412505.6
CDS-3UTR CCA 90 bp TCCAGGGGGCCTTTAATAGCTGAGAAGTGCTGCTCTTTCAGATGGGGGTGCCAACAAACCCCTGGGAACTaGCCGCCGTCCGCCGCGAGT +
Preference number: 4 (lower is better)
Translates to: SRGPLIAEKCCSFRWGCQQTPGN*PPSAAS
Trigger: ACTCGCGGCGGACGGCGGCCAGTTCCCAGGGGTTTG...TTGGCACCCCCATCTGAAAGAGCAGCACTTCTCAGCTATTAAAGGCCCCCTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000454885.6
CDS-3UTR TCA 90 bp AGAGACTGGGCTGGGCCAGAGACCAATCCACGGGGGAAAGGCCACCAGCACCCAGGGGCCTTTAATAGCTaGGAAGTGCTGCTCTTTCAG +
Preference number: 4 (lower is better)
Translates to: RDWAGPETNPRGKGHQHPGAFNS*EVLLFQ
Trigger: CTGAAAGAGCAGCACTTCTCAGCTATTAAAGGCCCC...TGGGTGCTGGTGGCCTTTCCCCCGTGGATTGGTCTCTGGCCCAGCCCAGTCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454885.6
CDS-3UTR GCA 90 bp TCCAGGGGGCCTTTAATAGCTGAGAAGTGCTGCTCTTTCAGATGGGGGTGCCAAGACTCCTCGAGCGCTTaGGGGAGCCGACGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: SRGPLIAEKCCSFRWGCQDSSSA*GSRREP
Trigger: TGGCTCACGTCGGCTCCCGCAAGCGCTCGAGGAGTC...TTGGCACCCCCATCTGAAAGAGCAGCACTTCTCAGCTATTAAAGGCCCCCTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000454885.6
CDS-3UTR GCA 90 bp TGGGCTGGGCCAGAGACCAATCCACGGGGGAAAGGCCACCAGCACCCATCAGGCTTAATAGCTGAGAAGTaGTGCTCTTTCAGATGGGGG +
Preference number: 4 (lower is better)
Translates to: WAGPETNPRGKGHQHPSGLIAEK*CSFRWG
Trigger: CCCCCATCTGAAAGAGCAGCACTTCTCAGCTATTAA...GCCTGATGGGTGCTGGTGGCCTTTCCCCCGTGGATTGGTCTCTGGCCCAGCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454885.6
CDS-3UTR GCA 90 bp AGGGGGCCTTTAATAGCTGAGAAGTGCTGCTCTTTCAGATGGGGGTGCCAAGCACCTCACGCCTGTGTCTaGCGAAGCTGCGCCCACTTC +
Preference number: 4 (lower is better)
Translates to: RGPLIAEKCCSFRWGCQAPHACV*RSCAHF
Trigger: GAAGTGGGCGCAGCTTCGGCAGACACAGGCGTGAGG...TGCTTGGCACCCCCATCTGAAAGAGCAGCACTTCTCAGCTATTAAAGGCCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000454885.6
CDS-3UTR TCA 90 bp TCCAGGGGGCCTTTAATAGCTGAGAAGTGCTGCTCTTTCAGATGGGGGTGCCAAGATGCAGGGAGAAGGTaGGGCTTGGGATGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: SRGPLIAEKCCSFRWGCQDAGRR*GLGCGG
Trigger: GCCTCCACATCCCAAGCCTCACCTTCTCCCTGCATC...TTGGCACCCCCATCTGAAAGAGCAGCACTTCTCAGCTATTAAAGGCCCCCTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000454885.6
CDS-3UTR CCA 90 bp AGGGGGCCTTTAATAGCTGAGAAGTGCTGCTCTTTCAGATGGGGGTGCCAAGCACTCATCCGTCAGGACTaGGCCATCCTCTTCCTCCCC +
Preference number: 4 (lower is better)
Translates to: RGPLIAEKCCSFRWGCQALIRQD*AILFLP
Trigger: GGGGAGGAAGAGGATGGCCCAGTCCTGACGGATGAG...TGCTTGGCACCCCCATCTGAAAGAGCAGCACTTCTCAGCTATTAAAGGCCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000454885.6
CDS-3UTR CCA 90 bp TGGGCTGGGCCAGAGACCAATCCACGGGGGAAAGGCCACCAGCACCCATCAGGCCTCTGTGTCGTTCTTTaGTTACGATTTCCTCTAGGA +
Preference number: 4 (lower is better)
Translates to: WAGPETNPRGKGHQHPSGLCVVL*LRFPLG
Trigger: TCCTAGAGGAAATCGTAACCAAAGAACGACACAGAG...GCCTGATGGGTGCTGGTGGCCTTTCCCCCGTGGATTGGTCTCTGGCCCAGCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412505.6
ENST00000454885.6
CDS-3UTR GCA 90 bp TCCAGGGGGCCTTTAATAGCTGAGAAGTGCTGCTCTTTCAGATGGGGGTGCCAATGGATTCGGGACTTCTaGTCATCCGTCAGGACTGGG +
Preference number: 4 (lower is better)
Translates to: SRGPLIAEKCCSFRWGCQWIRDF*SSVRTG
Trigger: CCCAGTCCTGACGGATGAGCAGAAGTCCCGAATCCA...TTGGCACCCCCATCTGAAAGAGCAGCACTTCTCAGCTATTAAAGGCCCCCTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000454885.6
CDS-3UTR CCA 90 bp TCCAGGGGGCCTTTAATAGCTGAGAAGTGCTGCTCTTTCAGATGGGGGTGCCAAACTCCTCCTTGGTCATaGGCTTCATGGCCTGGATTC +
Preference number: 4 (lower is better)
Translates to: SRGPLIAEKCCSFRWGCQTPPWS*ASWPGF
Trigger: GAATCCAGGCCATGAAGCCCATGACCAAGGAGGAGT...TTGGCACCCCCATCTGAAAGAGCAGCACTTCTCAGCTATTAAAGGCCCCCTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000454885.6
3UTR CAA 72 bp CGGGTGGCTTGCTTGTTGATCTCTCTGTGTCGTTCTTaGGTTACGATTTCCTCTAGGACCTCGCCATCTCCC +
Preference number: 4 (lower is better)
Translates to: RVACLLISLCRS*VTISSRTSPSP
Trigger: GGGAGATGGCGAGGTCCTAGAGGAAATCGTAACCAAAGAACGACACAGAGAGATCAACAAGCAAGCCACCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539770.5
CDS-3UTR TCA 90 bp TCCAGGGGGCCTTTAATAGCTGAGAAGTGCTGCTCTTTCAGATGGGGGTGCCAAGGGTGGCTTGCTTGTTaGTCTCTCTGTGTCGTTCTT +
Preference number: 4 (lower is better)
Translates to: SRGPLIAEKCCSFRWGCQGWLAC*SLCVVL
Trigger: AAGAACGACACAGAGAGATCAACAAGCAAGCCACCC...TTGGCACCCCCATCTGAAAGAGCAGCACTTCTCAGCTATTAAAGGCCCCCTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000454885.6
CDS-3UTR CCA 90 bp AGGGGGCCTTTAATAGCTGAGAAGTGCTGCTCTTTCAGATGGGGGTGCCAAGCACTCTGTGTCGTTCTTTaGTTACGATTTCCTCTAGGA +
Preference number: 4 (lower is better)
Translates to: RGPLIAEKCCSFRWGCQALCVVL*LRFPLG
Trigger: TCCTAGAGGAAATCGTAACCAAAGAACGACACAGAG...TGCTTGGCACCCCCATCTGAAAGAGCAGCACTTCTCAGCTATTAAAGGCCCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000454885.6
CDS CCA 90 bp CTGCCCTCTCGGCGCACGCCCGCAGCACCCACGCCCCCGGTGCCCTaGGAAGAAGGCGACCCTCGCGCGCGCCGCCCTCCTCCCCGGCTG +
Preference number: 5 (lower is better)
Translates to: LPSRRTPAAPTPPVP*EEGDPRARRPPPRL
Trigger: CAGCCGGGGAGGAGGGCGGCGCGCGCGAGGGTCGCCTTCTTCCCAGGGCACCGGGGGCGTGGGTGCTGCGGGCGTGCGCCGAGAGGGCAG
80% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000392435.7
ENST00000453766.7
ENST00000539770.6
ENST00000542099.5
ENST00000543566.6
CDS GCA 90 bp CAAGGCTGCCCTCTCGGCGCACGCCCGCAGCACCCACGCCCCCGGTaGCCTGGGAAGAAGGCGACCCTCGCGCGCGCCGCCCTCCTCCCC +
Preference number: 5 (lower is better)
Translates to: QGCPLGARPQHPRPR*PGKKATLARAALLP
Trigger: GGGGAGGAGGGCGGCGCGCGCGAGGGTCGCCTTCTTCCCAGGGCACCGGGGGCGTGGGTGCTGCGGGCGTGCGCCGAGAGGGCAGCCTTG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000392435.7
ENST00000453766.7
ENST00000539770.6
ENST00000542099.5
ENST00000543566.6
CDS CCA 90 bp AAGCGGCGGCGAGGAGGCTTCCGGCCGGGGCGCTGCGCGGGAGGCTaGCCGGCTGGGAAGCGCGGCGCCGCTGCCTTTCGTTCTGACGCC +
Preference number: 5 (lower is better)
Translates to: KRRRGGFRPGRCAGG*PAGKRGAAAFRSDA
Trigger: GGCGTCAGAACGAAAGGCAGCGGCGCCGCGCTTCCCAGCCGGCCAGCCTCCCGCGCAGCGCCCCGGCCGGAAGCCTCCTCGCCGCCGCTT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392435.7
ENST00000453766.7
ENST00000454885.6
ENST00000539770.6
ENST00000542099.5
ENST00000543566.6
CDS TCA 90 bp GGGAGGCTGGCCGGCTGGGAAGCGCGGCGCCGCTGCCTTTCGTTCTaGCGCCCCAGGTTCCGTCCCGGGCGCGCCCACCTCCCGCAGAGG +
Preference number: 5 (lower is better)
Translates to: GRLAGWEARRRCLSF*RPRFRPGRAHLPQR
Trigger: CCTCTGCGGGAGGTGGGCGCGCCCGGGACGGAACCTGGGGCGTCAGAACGAAAGGCAGCGGCGCCGCGCTTCCCAGCCGGCCAGCCTCCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392435.7
ENST00000453766.7
ENST00000454885.6
ENST00000539770.6
ENST00000542099.5
ENST00000543566.6
CDS-3UTR CAA 90 bp AACCTGCCCAGGCTGGGCCGCCAGCGTCGTCCACAGGCCTTGGCCAGCGGGGGCCGTCGTCCACAGGCCTaGGCCAGCGGGGGCCCTCAG +
Preference number: 5 (lower is better)
Translates to: NLPRLGRQRRPQALASGGRRPQA*ASGGPQ
Trigger: CTGAGGGCCCCCGCTGGCCAAGGCCTGTGGACGACG...GCCCCCGCTGGCCAAGGCCTGTGGACGACGCTGGCGGCCCAGCCTGGGCAGGTT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000412505.6
ENST00000426960.6
ENST00000454885.6
CDS TCA 90 bp GACGTGAGCCATGGCGCCGCGGGCTGGCGACGAAGAAGACGCGCTTaGGCCGAAGCCCCCAAGGCCGGCCGCGGGCGGGCTCCAAGGGTG +
Preference number: 5 (lower is better)
Translates to: DVSHGAAGWRRRRRA*AEAPKAGRGRAPRV
Trigger: CACCCTTGGAGCCCGCCCGCGGCCGGCCTTGGGGGCTTCGGCTCAAGCGCGTCTTCTTCGTCGCCAGCCCGCGGCGCCATGGCTCACGTC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536502.5
CDS GCA 90 bp GCCCCTCACGCCTGTGTCTGCCGAAGCTGCGCCCACTTCCAAGGCTaGCCTCTCGGCGCACGCCCGCAGCACCCACGCCCCCGGTGCCCT +
Preference number: 5 (lower is better)
Translates to: APHACVCRSCAHFQG*PLGARPQHPRPRCP
Trigger: AGGGCACCGGGGGCGTGGGTGCTGCGGGCGTGCGCCGAGAGGGCAGCCTTGGAAGTGGGCGCAGCTTCGGCAGACACAGGCGTGAGGGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000392435.7
ENST00000453766.7
ENST00000539770.6
ENST00000542099.5
ENST00000543566.6
CDS TCA 90 bp CCCCGGGACCGGCTGCGACTCCTCGAGCGCTTGCGGGAGCCGACGTaGGCCATGGCGCCGCGGGCTGGCGACGAAGAAGACGCGCTTGAG +
Preference number: 5 (lower is better)
Translates to: PRDRLRLLERLREPT*AMAPRAGDEEDALE
Trigger: CTCAAGCGCGTCTTCTTCGTCGCCAGCCCGCGGCGCCATGGCTCACGTCGGCTCCCGCAAGCGCTCGAGGAGTCGCAGCCGGTCCCGGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536502.5
CDS CCA 90 bp CCTGGGAAGAAGGCGACCCTCGCGCGCGCCGCCCTCCTCCCCGGCTaGTCCTGCCCTCTCCATACGACTGCGAGCTCCAGACTGAGGCGC +
Preference number: 5 (lower is better)
Translates to: PGKKATLARAALLPG*SCPLHTTASSRLRR
Trigger: GCGCCTCAGTCTGGAGCTCGCAGTCGTATGGAGAGGGCAGGACCAGCCGGGGAGGAGGGCGGCGCGCGCGAGGGTCGCCTTCTTCCCAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392435.7
ENST00000453766.7
ENST00000539770.6
ENST00000542099.5
ENST00000543566.6
CDS-3UTR CAA 90 bp ACCTGCCCAGGCTGGGCCGCCAGCGTCGTCCACAGGCCTTGGCCAGCGGGGGCCTCAGGGTCCACCACCTaGCGGATGATGCTCTGCCGG +
Preference number: 5 (lower is better)
Translates to: TCPGWAASVVHRPWPAGASGSTT*RMMLCR
Trigger: CCGGCAGAGCATCATCCGCAAGGTGGTGGACCCTGA...GGCCCCCGCTGGCCAAGGCCTGTGGACGACGCTGGCGGCCCAGCCTGGGCAGGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426960.6
ENST00000454885.6
CDS CCA 90 bp ACCGGCTGCGACTCCTCGAGCGCTTGCGGGAGCCGACGTGAGCCATaGCGCCGCGGGCTGGCGACGAAGAAGACGCGCTTGAGCCGAAGC +
Preference number: 5 (lower is better)
Translates to: TGCDSSSACGSRREP*RRGLATKKTRLSRS
Trigger: GCTTCGGCTCAAGCGCGTCTTCTTCGTCGCCAGCCCGCGGCGCCATGGCTCACGTCGGCTCCCGCAAGCGCTCGAGGAGTCGCAGCCGGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536502.5
CDS-3UTR CAA 90 bp ACCTGCCCAGGCTGGGCCGCCAGCGTCGTCCACAGGCCTTGGCCAGCGGGGGCCCTCCGGGCCTTCTGCTaGCTTCTCTCTGTGATGCAG +
Preference number: 5 (lower is better)
Translates to: TCPGWAASVVHRPWPAGALRAFC*LLSVMQ
Trigger: CTGCATCACAGAGAGAAGCAAGCAGAAGGCCCGGAG...GGCCCCCGCTGGCCAAGGCCTGTGGACGACGCTGGCGGCCCAGCCTGGGCAGGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454885.6
CDS-3UTR CAA 90 bp ACCTGCCCAGGCTGGGCCGCCAGCGTCGTCCACAGGCCTTGGCCAGCGGGGGCCAGGAGGAGCTGGATCTaGTTCTCCTCCGGGCCTTCT +
Preference number: 5 (lower is better)
Translates to: TCPGWAASVVHRPWPAGARRSWI*FSSGPS
Trigger: AGAAGGCCCGGAGGAGAACAAGATCCAGCTCCTCCT...GGCCCCCGCTGGCCAAGGCCTGTGGACGACGCTGGCGGCCCAGCCTGGGCAGGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000412505.6
ENST00000426960.6
ENST00000454885.6
CDS-3UTR CAA 90 bp AACCTGCCCAGGCTGGGCCGCCAGCGTCGTCCACAGGCCTTGGCCAGCGGGGGCGCATCCCACTCCTCCTaGGTCATGGGCTTCATGGCC +
Preference number: 5 (lower is better)
Translates to: NLPRLGRQRRPQALASGGASHSS*VMGFMA
Trigger: GGCCATGAAGCCCATGACCAAGGAGGAGTGGGATGC...GCCCCCGCTGGCCAAGGCCTGTGGACGACGCTGGCGGCCCAGCCTGGGCAGGTT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426960.6
ENST00000454885.6
CDS-3UTR CAA 90 bp AAACCTGCCCAGGCTGGGCCGCCAGCGTCGTCCACAGGCCTTGGCCAGCGGGGGTCAGGGTCCACCACCTaGCGGATGATGCTCTGCCGG +
Preference number: 5 (lower is better)
Translates to: KPAQAGPPASSTGLGQRGSGSTT*RMMLCR
Trigger: CCGGCAGAGCATCATCCGCAAGGTGGTGGACCCTGA...CCCCCGCTGGCCAAGGCCTGTGGACGACGCTGGCGGCCCAGCCTGGGCAGGTTT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426960.6
ENST00000454885.6
CDS-3UTR CAA 90 bp ACCTGCCCAGGCTGGGCCGCCAGCGTCGTCCACAGGCCTTGGCCAGCGGGGGCCTCAGGGTCCACCACCTaGCGGATGATGCTCTGCTGT +
Preference number: 5 (lower is better)
Translates to: TCPGWAASVVHRPWPAGASGSTT*RMMLCC
Trigger: ACAGCAGAGCATCATCCGCAAGGTGGTGGACCCTGA...GGCCCCCGCTGGCCAAGGCCTGTGGACGACGCTGGCGGCCCAGCCTGGGCAGGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412505.6
CDS-3UTR CAA 90 bp AAACCTGCCCAGGCTGGGCCGCCAGCGTCGTCCACAGGCCTTGGCCAGCGGGGGGGGGCCAGAAAGATCTaGGCAGTGAGCGCGGGCATG +
Preference number: 5 (lower is better)
Translates to: KPAQAGPPASSTGLGQRGGARKI*AVSAGM
Trigger: CATGCCCGCGCTCACTGCCAAGATCTTTCTGGCCCC...CCCCCGCTGGCCAAGGCCTGTGGACGACGCTGGCGGCCCAGCCTGGGCAGGTTT
70% GC, longest homopolymer 9 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426960.6
CDS-3UTR CAA 90 bp ACCTGCCCAGGCTGGGCCGCCAGCGTCGTCCACAGGCCTTGGCCAGCGGGGGCCCTCCGGGCCTTCTGCTaGCTTCTCTCTTGGGATGTG +
Preference number: 5 (lower is better)
Translates to: TCPGWAASVVHRPWPAGALRAFC*LLSWDV
Trigger: CACATCCCAAGAGAGAAGCAAGCAGAAGGCCCGGAG...GGCCCCCGCTGGCCAAGGCCTGTGGACGACGCTGGCGGCCCAGCCTGGGCAGGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412505.6
ENST00000426960.6
CDS-3UTR CAA 90 bp ACCTGCCCAGGCTGGGCCGCCAGCGTCGTCCACAGGCCTTGGCCAGCGGGGGCCGCTTCCGCCTTCTCCTaGCCCTTCTTCTTCAGCTTC +
Preference number: 5 (lower is better)
Translates to: TCPGWAASVVHRPWPAGAASAFS*PFFFSF
Trigger: GAAGCTGAAGAAGAAGGGCAAGGAGAAGGCGGAAGC...GGCCCCCGCTGGCCAAGGCCTGTGGACGACGCTGGCGGCCCAGCCTGGGCAGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000412505.6
ENST00000426960.6
ENST00000454885.6
CDS-3UTR CAA 90 bp AGAGACTGGGCTGGGCCAGAGACCAATCCACGGGGGAAAGGCCACCAGCACCCACGTCGTCCACAGGCCTaGGCCAGCGGGGGCCCTCAG +
Preference number: 5 (lower is better)
Translates to: RDWAGPETNPRGKGHQHPRRPQA*ASGGPQ
Trigger: CTGAGGGCCCCCGCTGGCCAAGGCCTGTGGACGACG...TGGGTGCTGGTGGCCTTTCCCCCGTGGATTGGTCTCTGGCCCAGCCCAGTCTCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000412505.6
ENST00000454885.6
CDS-3UTR CAA 90 bp AACCTGCCCAGGCTGGGCCGCCAGCGTCGTCCACAGGCCTTGGCCAGCGGGGGCCTGCTTGCTTCTCTCTaGGGATGTGGAGGCCGAGCA +
Preference number: 5 (lower is better)
Translates to: NLPRLGRQRRPQALASGGLLASL*GCGGRA
Trigger: TGCTCGGCCTCCACATCCCAAGAGAGAAGCAAGCAG...GCCCCCGCTGGCCAAGGCCTGTGGACGACGCTGGCGGCCCAGCCTGGGCAGGTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412505.6
ENST00000426960.6
CDS TCA 90 bp GCGCCTGGCCCTCACATCTCAGGCCCGGCTGCACAGAGGCATGACTaGGCGTCCCCGACCACTGCTCGCCCGACTTCCCCGGGTAGTAAC +
Preference number: 5 (lower is better)
Translates to: APGPHISGPAAQRHD*ASPTTARPTSPGSN
Trigger: GTTACTACCCGGGGAAGTCGGGCGAGCAGTGGTCGGGGACGCTCAGTCATGCCTCTGTGCAGCCGGGCCTGAGATGTGAGGGCCAGGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392433.3
ENST00000539576.5
ENST00000540382.5
ENST00000540708.5
CDS CCA 90 bp GAGCCATGGCGCCGCGGGGACTGCGAGCTCCAGACTGAGGCGCCCTaGTCTTTCCGACGCGCCCACCCAGTGACTCAGAGGTCGCAAACT +
Preference number: 5 (lower is better)
Translates to: EPWRRGDCELQTEAP*SFRRAHPVTQRSQT
Trigger: AGTTTGCGACCTCTGAGTCACTGGGTGGGCGCGTCGGAAAGACCAGGGCGCCTCAGTCTGGAGCTCGCAGTCCCCGCGGCGCCATGGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413381.6
ENST00000426960.6
CDS-3UTR CAA 90 bp ACCTGCCCAGGCTGGGCCGCCAGCGTCGTCCACAGGCCTTGGCCAGCGGGGGCCTTCTTCTTCCTCCTCTaGTCCTTGTACTTCCCCCGC +
Preference number: 5 (lower is better)
Translates to: TCPGWAASVVHRPWPAGAFFFLL*SLYFPR
Trigger: GCGGGGGAAGTACAAGGACAAGAGGAGGAAGAAGAA...GGCCCCCGCTGGCCAAGGCCTGTGGACGACGCTGGCGGCCCAGCCTGGGCAGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000412505.6
ENST00000426960.6
ENST00000454885.6
CDS-3UTR CAA 90 bp AACCTGCCCAGGCTGGGCCGCCAGCGTCGTCCACAGGCCTTGGCCAGCGGGGGCCCTCGGGTGGCTTGCTaGTTGATCTCTCTGTGTCGT +
Preference number: 5 (lower is better)
Translates to: NLPRLGRQRRPQALASGGPRVAC*LISLCR
Trigger: ACGACACAGAGAGATCAACAAGCAAGCCACCCGAGG...GCCCCCGCTGGCCAAGGCCTGTGGACGACGCTGGCGGCCCAGCCTGGGCAGGTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000412505.6
ENST00000426960.6
ENST00000454885.6
CDS-3UTR CAA 90 bp AAACCTGCCCAGGCTGGGCCGCCAGCGTCGTCCACAGGCCTTGGCCAGCGGGGGCTCCGGGCCTTCTGCTaGCTTCTCTCTTGGGATGTG +
Preference number: 5 (lower is better)
Translates to: KPAQAGPPASSTGLGQRGLRAFC*LLSWDV
Trigger: CACATCCCAAGAGAGAAGCAAGCAGAAGGCCCGGAG...CCCCCGCTGGCCAAGGCCTGTGGACGACGCTGGCGGCCCAGCCTGGGCAGGTTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412505.6
ENST00000426960.6
CDS TCA 90 bp CTTCTGCTCATCCGTCAGGACTGGGCCATCCTCTTCCTCCCCAGCTaGTCGGTGCCACTGGTCCAGCGAGGGGCCCGGCAGAGCCTCCAC +
Preference number: 5 (lower is better)
Translates to: LLLIRQDWAILFLPS*SVPLVQRGARQSLH
Trigger: GTGGAGGCTCTGCCGGGCCCCTCGCTGGACCAGTGGCACCGATCAGCTGGGGAGGAAGAGGATGGCCCAGTCCTGACGGATGAGCAGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000315580.10
ENST00000392433.3
ENST00000392435.7
ENST00000413381.6
ENST00000426960.6
ENST00000439686.6
ENST00000453766.7
ENST00000454885.6
ENST00000456762.3
ENST00000536502.5
ENST00000539576.5
ENST00000540382.5
ENST00000540708.5
ENST00000542099.5
ENST00000543566.6
CDS TCA 90 bp TCCCCGGCTGGTCCTGCCCTCTCCATACGACTGCGAGCTCCAGACTaGGGCGCCCTGGTCTTTCCGACGCGCCCACCCAGTGACTCAGAG +
Preference number: 5 (lower is better)
Translates to: SPAGPALSIRLRAPD*GALVFPTRPPSDSE
Trigger: CTCTGAGTCACTGGGTGGGCGCGTCGGAAAGACCAGGGCGCCTCAGTCTGGAGCTCGCAGTCGTATGGAGAGGGCAGGACCAGCCGGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392435.7
ENST00000453766.7
ENST00000539770.6
ENST00000542099.5
ENST00000543566.6
CDS CCA 90 bp GAAGGTGAGGCCTCCGCCCCAGGGGCCGTGCTGGCCTTGCGACCTTaGGATGTGGAGGCCGAGCAGTTCCTCGAGGTGTCTTTCCTGCTC +
Preference number: 5 (lower is better)
Translates to: EGEASAPGAVLALRP*DVEAEQFLEVSFLL
Trigger: GAGCAGGAAAGACACCTCGAGGAACTGCTCGGCCTCCACATCCCAAGGTCGCAAGGCCAGCACGGCCCCTGGGGCGGAGGCCTCACCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315580.10
CDS CCA 90 bp TGGTCCTCACCCTCCGCCCCAGGGGCCGTGCTGGCCTTGCGACCTTaGGATGTGGAGGCCGAGCAGTTCCTCGAGGTGTCTTTCCTGCTC +
Preference number: 5 (lower is better)
Translates to: WSSPSAPGAVLALRP*DVEAEQFLEVSFLL
Trigger: GAGCAGGAAAGACACCTCGAGGAACTGCTCGGCCTCCACATCCCAAGGTCGCAAGGCCAGCACGGCCCCTGGGGCGGAGGGTGAGGACCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392433.3
ENST00000539576.5
ENST00000540382.5
ENST00000540708.5
CDS CCA 90 bp GGGCTTTCCAGAACAGAGATGGAGCTTCCCAGAGGAGCCCCTTCCTaGCTCCTGCGGCGCCTGGCCCTCACATCTCAGGCCCGGCTGCAC +
Preference number: 5 (lower is better)
Translates to: GLSRTEMELPRGAPS*LLRRLALTSQARLH
Trigger: GTGCAGCCGGGCCTGAGATGTGAGGGCCAGGCGCCGCAGGAGCCAGGAAGGGGCTCCTCTGGGAAGCTCCATCTCTGTTCTGGAAAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392433.3
ENST00000539576.5
ENST00000540382.5
ENST00000540708.5
CDS TCA 90 bp CTCCCCACCTGGTGCGCCCCGTCTCAGGGTCCACCACCTTGCGGATaGTGCTCTGCCGGGCATCCCACTCCTCCTTGGTCATGGGCTTCA +
Preference number: 5 (lower is better)
Translates to: LPTWCAPSQGPPPCG*CSAGHPTPPWSWAS
Trigger: TGAAGCCCATGACCAAGGAGGAGTGGGATGCCCGGCAGAGCATCATCCGCAAGGTGGTGGACCCTGAGACGGGGCGCACCAGGTGGGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539576.5
ENST00000540382.5
ENST00000540708.5
CDS CCA 90 bp CGGCTACAGGGTGAGCGCTTCCTGAGGGGCTTTCCAGAACAGAGATaGAGCTTCCCAGAGGAGCCCCTTCCTGGCTCCTGCGGCGCCTGG +
Preference number: 5 (lower is better)
Translates to: RLQGERFLRGFPEQR*SFPEEPLPGSCGAW
Trigger: CCAGGCGCCGCAGGAGCCAGGAAGGGGCTCCTCTGGGAAGCTCCATCTCTGTTCTGGAAAGCCCCTCAGGAAGCGCTCACCCTGTAGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392433.3
ENST00000539576.5
ENST00000540382.5
ENST00000540708.5
CDS-3UTR CAA 90 bp AAACCTGCCCAGGCTGGGCCGCCAGCGTCGTCCACAGGCCTTGGCCAGCGGGGGCGGGTGGCTTGCTTGTaGATCTCTCTGTGTCGTTCT +
Preference number: 5 (lower is better)
Translates to: KPAQAGPPASSTGLGQRGRVACL*ISLCRS
Trigger: AGAACGACACAGAGAGATCAACAAGCAAGCCACCCG...CCCCCGCTGGCCAAGGCCTGTGGACGACGCTGGCGGCCCAGCCTGGGCAGGTTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000412505.6
ENST00000426960.6
ENST00000454885.6
CDS TCA 90 bp TCTGGCCTGGGGCAGGCACAGACCGGCTACAGGGTGAGCGCTTCCTaGGGGGCTTTCCAGAACAGAGATGGAGCTTCCCAGAGGAGCCCC +
Preference number: 5 (lower is better)
Translates to: SGLGQAQTGYRVSAS*GAFQNRDGASQRSP
Trigger: GGGGCTCCTCTGGGAAGCTCCATCTCTGTTCTGGAAAGCCCCTCAGGAAGCGCTCACCCTGTAGCCGGTCTGTGCCTGCCCCAGGCCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000392433.3
ENST00000539576.5
ENST00000540382.5
ENST00000540708.5
CDS GCA 90 bp CCTTCTGCTTGCTTCTCTCCTCCGCCCCAGGGGCCGTGCTGGCCTTaGGACCTTGGGATGTGGAGGCCGAGCAGTTCCTCGAGGTGTCTT +
Preference number: 5 (lower is better)
Translates to: PSACFSPPPQGPCWP*DLGMWRPSSSSRCL
Trigger: AAGACACCTCGAGGAACTGCTCGGCCTCCACATCCCAAGGTCGCAAGGCCAGCACGGCCCCTGGGGCGGAGGAGAGAAGCAAGCAGAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357866.4
ENST00000413381.6
ENST00000439686.6
ENST00000453766.7
CDS GCA 90 bp GGGGCCTCACCCACTCTCCCTGATGAAGGCAGTGGAGCTGGGCTCTaGCTTGCCAGCCTCAGCCCGGCCAACAACAGCCCTTTCAAGAGC +
Preference number: 5 (lower is better)
Translates to: GASPTLPDEGSGAGL*LASLSPANNSPFKS
Trigger: GCTCTTGAAAGGGCTGTTGTTGGCCGGGCTGAGGCTGGCAAGGCAGAGCCCAGCTCCACTGCCTTCATCAGGGAGAGTGGGTGAGGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539576.5
ENST00000540382.5
ENST00000540708.5
CDS CCA 90 bp AGGCCTCCGCCCCAGGGGCCGTGCTGGCCTTGCGACCTTGGGATGTaGAGGCCGAGCAGTTCCTCGAGGTGTCTTTCCTGCTCTTCTTCT +
Preference number: 5 (lower is better)
Translates to: RPPPQGPCWPCDLGM*RPSSSSRCLSCSSS
Trigger: AGAAGAAGAGCAGGAAAGACACCTCGAGGAACTGCTCGGCCTCCACATCCCAAGGTCGCAAGGCCAGCACGGCCCCTGGGGCGGAGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315580.10
CDS CCA 90 bp TTGCTTCTCTCCTCCGCCCCAGGGGCCGTGCTGGCCTTGCGACCTTaGGATGTGGAGGCCGAGCAGTTCCTCGAGGTGTCTTTCCTGCTC +
Preference number: 5 (lower is better)
Translates to: LLLSSAPGAVLALRP*DVEAEQFLEVSFLL
Trigger: GAGCAGGAAAGACACCTCGAGGAACTGCTCGGCCTCCACATCCCAAGGTCGCAAGGCCAGCACGGCCCCTGGGGCGGAGGAGAGAAGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357866.4
ENST00000413381.6
ENST00000439686.6
ENST00000453766.7
CDS CCA 90 bp CACCCTCCGCCCCAGGGGCCGTGCTGGCCTTGCGACCTTGGGATGTaGAGGCCGAGCAGTTCCTCGAGGTGTCTTTCCTGCTCTTCTTCT +
Preference number: 5 (lower is better)
Translates to: HPPPQGPCWPCDLGM*RPSSSSRCLSCSSS
Trigger: AGAAGAAGAGCAGGAAAGACACCTCGAGGAACTGCTCGGCCTCCACATCCCAAGGTCGCAAGGCCAGCACGGCCCCTGGGGCGGAGGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392433.3
ENST00000539576.5
ENST00000540382.5
ENST00000540708.5
CDS CCA 90 bp GCTAGAAGAACCTCCGCCCCAGGGGCCGTGCTGGCCTTGCGACCTTaGGATGTGGAGGCCGAGCAGTTCCTCGAGGTGTCTTTCCTGCTC +
Preference number: 5 (lower is better)
Translates to: ARRTSAPGAVLALRP*DVEAEQFLEVSFLL
Trigger: GAGCAGGAAAGACACCTCGAGGAACTGCTCGGCCTCCACATCCCAAGGTCGCAAGGCCAGCACGGCCCCTGGGGCGGAGGTTCTTCTAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442210.2
ENST00000539770.6
CDS CCA 90 bp GAGGAAGAAGAGGAGCTAGAAGAACCTCCGCCCCAGGGGCCGTGCTaGCCTTGCGACCTTGGGATGTGGAGGCCGAGCAGTTCCTCGAGG +
Preference number: 5 (lower is better)
Translates to: EEEEELEEPPPQGPC*PCDLGMWRPSSSSR
Trigger: CCTCGAGGAACTGCTCGGCCTCCACATCCCAAGGTCGCAAGGCCAGCACGGCCCCTGGGGCGGAGGTTCTTCTAGCTCCTCTTCTTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442210.2
ENST00000539770.6
CDS-3UTR CAA 90 bp ACCTGCCCAGGCTGGGCCGCCAGCGTCGTCCACAGGCCTTGGCCAGCGGGGGCCTCTCTGTGTCGTTCTTaGGTTACGATTTCCTCTAGG +
Preference number: 5 (lower is better)
Translates to: TCPGWAASVVHRPWPAGASLCRS*VTISSR
Trigger: CCTAGAGGAAATCGTAACCAAAGAACGACACAGAGA...GGCCCCCGCTGGCCAAGGCCTGTGGACGACGCTGGCGGCCCAGCCTGGGCAGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000412505.6
ENST00000426960.6
ENST00000454885.6
CDS GCA 90 bp GAAGAGGAGCTAGAAGAACCTCCGCCCCAGGGGCCGTGCTGGCCTTaGGACCTTGGGATGTGGAGGCCGAGCAGTTCCTCGAGGTGTCTT +
Preference number: 5 (lower is better)
Translates to: EEELEEPPPQGPCWP*DLGMWRPSSSSRCL
Trigger: AAGACACCTCGAGGAACTGCTCGGCCTCCACATCCCAAGGTCGCAAGGCCAGCACGGCCCCTGGGGCGGAGGTTCTTCTAGCTCCTCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442210.2
ENST00000539770.6
CDS CCA 90 bp TCTCCTCCGCCCCAGGGGCCGTGCTGGCCTTGCGACCTTGGGATGTaGAGGCCGAGCAGTTCCTCGAGGTGTCTTTCCTGCTCTTCTTCT +
Preference number: 5 (lower is better)
Translates to: SPPPQGPCWPCDLGM*RPSSSSRCLSCSSS
Trigger: AGAAGAAGAGCAGGAAAGACACCTCGAGGAACTGCTCGGCCTCCACATCCCAAGGTCGCAAGGCCAGCACGGCCCCTGGGGCGGAGGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357866.4
ENST00000413381.6
ENST00000439686.6
ENST00000453766.7
CDS CCA 90 bp GTCCTGCCCTCTCCATACGACTGCGAGCTCCAGACTGAGGCGCCCTaGTCTTTCCGACGCGCCCACCCAGTGACTCAGAGGTCGCAAACT +
Preference number: 5 (lower is better)
Translates to: VLPSPYDCELQTEAP*SFRRAHPVTQRSQT
Trigger: AGTTTGCGACCTCTGAGTCACTGGGTGGGCGCGTCGGAAAGACCAGGGCGCCTCAGTCTGGAGCTCGCAGTCGTATGGAGAGGGCAGGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392435.7
ENST00000453766.7
ENST00000539770.6
ENST00000542099.5
ENST00000543566.6
CDS CCA 90 bp GAACCTCCGCCCCAGGGGCCGTGCTGGCCTTGCGACCTTGGGATGTaGAGGCCGAGCAGTTCCTCGAGGTGTCTTTCCTGCTCTTCTTCT +
Preference number: 5 (lower is better)
Translates to: EPPPQGPCWPCDLGM*RPSSSSRCLSCSSS
Trigger: AGAAGAAGAGCAGGAAAGACACCTCGAGGAACTGCTCGGCCTCCACATCCCAAGGTCGCAAGGCCAGCACGGCCCCTGGGGCGGAGGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442210.2
ENST00000539770.6
CDS-3UTR CAA 90 bp TGGGCTGGGCCAGAGACCAATCCACGGGGGAAAGGCCACCAGCACCCATCAGGCAGGAGGAGCTGGATCTaGTTCTCCTCCGGGCCTTCT +
Preference number: 5 (lower is better)
Translates to: WAGPETNPRGKGHQHPSGRRSWI*FSSGPS
Trigger: AGAAGGCCCGGAGGAGAACAAGATCCAGCTCCTCCT...GCCTGATGGGTGCTGGTGGCCTTTCCCCCGTGGATTGGTCTCTGGCCCAGCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412505.6
ENST00000454885.6
CDS-3UTR CAA 90 bp AAGAGACTGGGCTGGGCCAGAGACCAATCCACGGGGGAAAGGCCACCAGCACCCGCATCCCACTCCTCCTaGGTCATGGGCTTCATGGCC +
Preference number: 5 (lower is better)
Translates to: KRLGWARDQSTGERPPAPASHSS*VMGFMA
Trigger: GGCCATGAAGCCCATGACCAAGGAGGAGTGGGATGC...GGGTGCTGGTGGCCTTTCCCCCGTGGATTGGTCTCTGGCCCAGCCCAGTCTCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454885.6
CDS TCA 90 bp AGCTCCAGACTGAGGCGCCCTGGTCTTTCCGACGCGCCCACCCAGTaGCTCAGAGGTCGCAAACTCGTGTCCGTAGGGGCCAGAAAGATC +
Preference number: 5 (lower is better)
Translates to: SSRLRRPGLSDAPTQ*LRGRKLVSVGARKI
Trigger: GATCTTTCTGGCCCCTACGGACACGAGTTTGCGACCTCTGAGTCACTGGGTGGGCGCGTCGGAAAGACCAGGGCGCCTCAGTCTGGAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000392435.7
ENST00000413381.6
ENST00000426960.6
ENST00000453766.7
ENST00000539770.6
ENST00000542099.5
ENST00000543566.6
CDS-3UTR CAA 90 bp AAGAGACTGGGCTGGGCCAGAGACCAATCCACGGGGGAAAGGCCACCAGCACCCAGGAGGAGCTGGATCTaGTTCTCCTCCGGGCCTTCT +
Preference number: 5 (lower is better)
Translates to: KRLGWARDQSTGERPPAPRRSWI*FSSGPS
Trigger: AGAAGGCCCGGAGGAGAACAAGATCCAGCTCCTCCT...GGGTGCTGGTGGCCTTTCCCCCGTGGATTGGTCTCTGGCCCAGCCCAGTCTCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412505.6
ENST00000454885.6
CDS-3UTR CAA 90 bp AGAGACTGGGCTGGGCCAGAGACCAATCCACGGGGGAAAGGCCACCAGCACCCACTGCTTGCTTCTCTCTaGGGATGTGGAGGCCGAGCA +
Preference number: 5 (lower is better)
Translates to: RDWAGPETNPRGKGHQHPLLASL*GCGGRA
Trigger: TGCTCGGCCTCCACATCCCAAGAGAGAAGCAAGCAG...TGGGTGCTGGTGGCCTTTCCCCCGTGGATTGGTCTCTGGCCCAGCCCAGTCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412505.6
CDS CCA 90 bp CTCTGCCGGGCATCCCACTCCTCCTTGGTCATGGGCTTCATGGCCTaGATTCGGGACTTCTGCTCATCCGTCAGGACTGGGCCATCCTCT +
Preference number: 5 (lower is better)
Translates to: LCRASHSSLVMGFMA*IRDFCSSVRTGPSS
Trigger: AGAGGATGGCCCAGTCCTGACGGATGAGCAGAAGTCCCGAATCCAGGCCATGAAGCCCATGACCAAGGAGGAGTGGGATGCCCGGCAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000315580.10
ENST00000392433.3
ENST00000392435.7
ENST00000413381.6
ENST00000426960.6
ENST00000439686.6
ENST00000453766.7
ENST00000454885.6
ENST00000456762.3
ENST00000536502.5
ENST00000539576.5
ENST00000540382.5
ENST00000540708.5
ENST00000542099.5
ENST00000543566.6
CDS CCA 90 bp CCAGCTCGCATCTGGAAGGCCAGGCAGTCCCCTCGGGTGGCTTGCTaGGGAAGAAAGCACACAGGAGGAGGGGTACATCACAAACAGAGC +
Preference number: 5 (lower is better)
Translates to: PARIWKARQSPRVAC*GRKHTGGGVHHKQS
Trigger: GCTCTGTTTGTGATGTACCCCTCCTCCTGTGTGCTTTCTTCCCCAGCAAGCCACCCGAGGGGACTGCCTGGCCTTCCAGATGCGAGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000392433.3
ENST00000392435.7
ENST00000442210.2
ENST00000456762.3
ENST00000536073.1
ENST00000540708.5
CDS CCA 90 bp CTCCTCCCGAGAGCACACATCTTCAGCCAACACTCCCAGATCCTGTaGTGTAAGTCAGGCCGAAAGCTCCCCACCTGGTGCGCCCCGTCT +
Preference number: 5 (lower is better)
Translates to: LLPRAHIFSQHSQIL*CKSGRKLPTWCAPS
Trigger: AGACGGGGCGCACCAGGTGGGGAGCTTTCGGCCTGACTTACACCACAGGATCTGGGAGTGTTGGCTGAAGATGTGTGCTCTCGGGAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539576.5
ENST00000540382.5
ENST00000540708.5
CDS-3UTR CAA 90 bp AGAGACTGGGCTGGGCCAGAGACCAATCCACGGGGGAAAGGCCACCAGCACCCAGCTTCCGCCTTCTCCTaGCCCTTCTTCTTCAGCTTC +
Preference number: 5 (lower is better)
Translates to: RDWAGPETNPRGKGHQHPASAFS*PFFFSF
Trigger: GAAGCTGAAGAAGAAGGGCAAGGAGAAGGCGGAAGC...TGGGTGCTGGTGGCCTTTCCCCCGTGGATTGGTCTCTGGCCCAGCCCAGTCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412505.6
ENST00000454885.6
CDS-3UTR CAA 90 bp AGAGACTGGGCTGGGCCAGAGACCAATCCACGGGGGAAAGGCCACCAGCACCCACCTCGGGTGGCTTGCTaGTTGATCTCTCTGTGTCGT +
Preference number: 5 (lower is better)
Translates to: RDWAGPETNPRGKGHQHPPRVAC*LISLCR
Trigger: ACGACACAGAGAGATCAACAAGCAAGCCACCCGAGG...TGGGTGCTGGTGGCCTTTCCCCCGTGGATTGGTCTCTGGCCCAGCCCAGTCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412505.6
ENST00000454885.6
CDS-3UTR CAA 90 bp AAGAGACTGGGCTGGGCCAGAGACCAATCCACGGGGGAAAGGCCACCAGCACCCCGGGTGGCTTGCTTGTaGATCTCTCTGTGTCGTTCT +
Preference number: 5 (lower is better)
Translates to: KRLGWARDQSTGERPPAPRVACL*ISLCRS
Trigger: AGAACGACACAGAGAGATCAACAAGCAAGCCACCCG...GGGTGCTGGTGGCCTTTCCCCCGTGGATTGGTCTCTGGCCCAGCCCAGTCTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000412505.6
ENST00000454885.6
CDS GCA 90 bp AGGGGCCCGGCAGAGCCTCCACCTGCTGTGCTTCCGCCTTCTCCTTaGCCTTCTTCTTCAGCTTCTTCCTCTTCTTCTTCTTCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: RGPAEPPPAVLPPSP*PSSSASSSSSSSSS
Trigger: GGAGGAAGAAGAAGAAGAAGAGGAAGAAGCTGAAGAAGAAGGGCAAGGAGAAGGCGGAAGCACAGCAGGTGGAGGCTCTGCCGGGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000315580.10
ENST00000392433.3
ENST00000392435.7
ENST00000413381.6
ENST00000426960.6
ENST00000439686.6
ENST00000453766.7
ENST00000454885.6
ENST00000456762.3
ENST00000536502.5
ENST00000539576.5
ENST00000540382.5
ENST00000540708.5
ENST00000542099.5
ENST00000543566.6
CDS GCA 90 bp CAGGATTCTGCTCCAGCTGATACGTGCAACGTGGCATGGGGCTGGTaGCCCACCTTCCCAGGGAGACCAAACTCAAGACTGCAATATGGA +
Preference number: 5 (lower is better)
Translates to: QDSAPADTCNVAWGW*PTFPGRPNSRLQYG
Trigger: TCCATATTGCAGTCTTGAGTTTGGTCTCCCTGGGAAGGTGGGGCACCAGCCCCATGCCACGTTGCACGTATCAGCTGGAGCAGAATCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543566.6
CDS CCA 90 bp AGCCAGGATTCTGCTCCAGCTGATACGTGCAACGTGGCATGGGGCTaGTGCCCCACCTTCCCAGGGAGACCAAACTCAAGACTGCAATAT +
Preference number: 5 (lower is better)
Translates to: SQDSAPADTCNVAWG*CPTFPGRPNSRLQY
Trigger: ATATTGCAGTCTTGAGTTTGGTCTCCCTGGGAAGGTGGGGCACCAGCCCCATGCCACGTTGCACGTATCAGCTGGAGCAGAATCCTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543566.6
CDS-3UTR CAA 90 bp AAGAGACTGGGCTGGGCCAGAGACCAATCCACGGGGGAAAGGCCACCAGCACCCTCTCTGTGTCGTTCTTaGGTTACGATTTCCTCTAGG +
Preference number: 5 (lower is better)
Translates to: KRLGWARDQSTGERPPAPSLCRS*VTISSR
Trigger: CCTAGAGGAAATCGTAACCAAAGAACGACACAGAGA...GGGTGCTGGTGGCCTTTCCCCCGTGGATTGGTCTCTGGCCCAGCCCAGTCTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412505.6
ENST00000454885.6
CDS GCA 90 bp GAAGAAGAGGAGGAGGAGCTGGATCTTGTTCTCCTCCGGGCCTTCTaGTTGCTTCTCTCTGTGATGCAGGGAGAAGGTGAGGCTTGGGAT +
Preference number: 5 (lower is better)
Translates to: EEEEEELDLVLLRAF*LLLSVMQGEGEAWD
Trigger: ATCCCAAGCCTCACCTTCTCCCTGCATCACAGAGAGAAGCAAGCAGAAGGCCCGGAGGAGAACAAGATCCAGCTCCTCCTCCTCTTCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000454885.6
ENST00000542099.5
CDS CCA 90 bp CTGGTGCCCCACCTTCCCAGGGAGACCAAACTCAAGACTGCAATATaGAAGCCCCCTGAGTTTCAAATGTGTAACCCAAAGCGTGGCTGT +
Preference number: 5 (lower is better)
Translates to: LVPHLPRETKLKTAI*KPPEFQMCNPKRGC
Trigger: ACAGCCACGCTTTGGGTTACACATTTGAAACTCAGGGGGCTTCCATATTGCAGTCTTGAGTTTGGTCTCCCTGGGAAGGTGGGGCACCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543566.6
CDS TCA 72 bp CGGCTGCGACTCCTCGAGCGCTTGCGGGAGCCGACGTaGGCCATGGCGCCGCGGGCCTCCAGCCCCGCGCCC +
Preference number: 6 (lower is better)
Translates to: RLRLLERLREPT*AMAPRASSPAP
Trigger: GGGCGCGGGGCTGGAGGCCCGCGGCGCCATGGCTCACGTCGGCTCCCGCAAGCGCTCGAGGAGTCGCAGCCG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000412505.6
ENST00000439686.6
ENST00000540382.5
ENST00000540708.5
CDS GCA 72 bp CCCGTCCCCGGGACCGGCTGCGACTCCTCGAGCGCTTaGGGGAGCCGACGTGAGCCATGGCGCCGCGGGCCC +
Preference number: 6 (lower is better)
Translates to: PVPGTGCDSSSA*GSRREPWRRGP
Trigger: GGGCCCGCGGCGCCATGGCTCACGTCGGCTCCCGCAAGCGCTCGAGGAGTCGCAGCCGGTCCCGGGGACGGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392433.3
CDS GCA 72 bp CCCGTCCCCGGGACCGGCTGCGACTCCTCGAGCGCTTaGGGGAGCCGACGTGAGCCATGGCGCCGCGGGCCG +
Preference number: 6 (lower is better)
Translates to: PVPGTGCDSSSA*GSRREPWRRGP
Trigger: CGGCCCGCGGCGCCATGGCTCACGTCGGCTCCCGCAAGCGCTCGAGGAGTCGCAGCCGGTCCCGGGGACGGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454885.6
CDS CCA 72 bp CGAGGAGGCTTCCGGCCGGGGCGCTGCGCGGGAGGCTaGCCGGCTGGGAAGCGCGGCGCCGCTGCCTTTCGT +
Preference number: 6 (lower is better)
Translates to: RGGFRPGRCAGG*PAGKRGAAAFR
Trigger: ACGAAAGGCAGCGGCGCCGCGCTTCCCAGCCGGCCAGCCTCCCGCGCAGCGCCCCGGCCGGAAGCCTCCTCG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392435.7
ENST00000453766.7
ENST00000454885.6
ENST00000539770.6
ENST00000542099.5
ENST00000543566.6
CDS TCA 72 bp CGGCTGCGACTCCTCGAGCGCTTGCGGGAGCCGACGTaGGCCATGGCGCCGCGGGCTCGACCGCCCTGCGGG +
Preference number: 6 (lower is better)
Translates to: RLRLLERLREPT*AMAPRARPPCG
Trigger: CCCGCAGGGCGGTCGAGCCCGCGGCGCCATGGCTCACGTCGGCTCCCGCAAGCGCTCGAGGAGTCGCAGCCG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315580.10
ENST00000392435.7
ENST00000442210.2
ENST00000453766.7
ENST00000539576.5
ENST00000539770.6
ENST00000542099.5
ENST00000543566.6
CDS GCA 72 bp CCCGTCCCCGGGACCGGCTGCGACTCCTCGAGCGCTTaGGGGAGCCGACGTGAGCCATGGCGCCGCGGGCTC +
Preference number: 6 (lower is better)
Translates to: PVPGTGCDSSSA*GSRREPWRRGL
Trigger: GAGCCCGCGGCGCCATGGCTCACGTCGGCTCCCGCAAGCGCTCGAGGAGTCGCAGCCGGTCCCGGGGACGGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000315580.10
ENST00000392435.7
ENST00000442210.2
ENST00000453766.7
ENST00000539576.5
ENST00000539770.6
ENST00000542099.5
ENST00000543566.6
CDS GCA 72 bp CCCGTCCCCGGGACCGGCTGCGACTCCTCGAGCGCTTaGGGGAGCCGACGTGAGCCATGGCGCCGCGGGCCT +
Preference number: 6 (lower is better)
Translates to: PVPGTGCDSSSA*GSRREPWRRGP
Trigger: AGGCCCGCGGCGCCATGGCTCACGTCGGCTCCCGCAAGCGCTCGAGGAGTCGCAGCCGGTCCCGGGGACGGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000412505.6
ENST00000439686.6
ENST00000540382.5
ENST00000540708.5
CDS GCA 72 bp CCCGTCCCCGGGACCGGCTGCGACTCCTCGAGCGCTTaGGGGAGCCGACGTGAGCCATGGCGCCGCGGGCTG +
Preference number: 6 (lower is better)
Translates to: PVPGTGCDSSSA*GSRREPWRRGL
Trigger: CAGCCCGCGGCGCCATGGCTCACGTCGGCTCCCGCAAGCGCTCGAGGAGTCGCAGCCGGTCCCGGGGACGGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536502.5
CDS CCA 72 bp CATGGCGCCGCGGGCCGGCTCCAAACCCCTGGGAACTaGCCGCCGTCCGCCGCGAGTGGCGTCTGGGGCGCT +
Preference number: 6 (lower is better)
Translates to: HGAAGRLQTPGN*PPSAASGVWGA
Trigger: AGCGCCCCAGACGCCACTCGCGGCGGACGGCGGCCAGTTCCCAGGGGTTTGGAGCCGGCCCGCGGCGCCATG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454885.6
CDS CAA 72 bp CCATGGCGCCGCGGGCTGGCGACGAAGAAGACGCGCTaGAGCCGAAGCCCCCAAGGCCGGCCGCGGGCGGGC +
Preference number: 6 (lower is better)
Translates to: PWRRGLATKKTR*SRSPQGRPRAG
Trigger: GCCCGCCCGCGGCCGGCCTTGGGGGCTTCGGCTCAAGCGCGTCTTCTTCGTCGCCAGCCCGCGGCGCCATGG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536502.5
CDS TCA 72 bp GCCGGCTGGGAAGCGCGGCGCCGCTGCCTTTCGTTCTaGCGCCCCAGGTTCCGTCCCGGGCGCGCCCACCTC +
Preference number: 6 (lower is better)
Translates to: AGWEARRRCLSF*RPRFRPGRAHL
Trigger: GAGGTGGGCGCGCCCGGGACGGAACCTGGGGCGTCAGAACGAAAGGCAGCGGCGCCGCGCTTCCCAGCCGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392435.7
ENST00000453766.7
ENST00000454885.6
ENST00000539770.6
ENST00000542099.5
ENST00000543566.6
CDS TCA 72 bp CATGGCGCCGCGGGCTGGCGACGAAGAAGACGCGCTTaGGCCGAAGCCCCCAAGGCCGGCCGCGGGCGGGCT +
Preference number: 6 (lower is better)
Translates to: HGAAGWRRRRRA*AEAPKAGRGRA
Trigger: AGCCCGCCCGCGGCCGGCCTTGGGGGCTTCGGCTCAAGCGCGTCTTCTTCGTCGCCAGCCCGCGGCGCCATG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536502.5
CDS CCA 72 bp GACTCCTCGAGCGCTTGCGGGAGCCGACGTGAGCCATaGCGCCGCGGGCTCGACCGCCCTGCGGGCCGGACA +
Preference number: 6 (lower is better)
Translates to: DSSSACGSRREP*RRGLDRPAGRT
Trigger: TGTCCGGCCCGCAGGGCGGTCGAGCCCGCGGCGCCATGGCTCACGTCGGCTCCCGCAAGCGCTCGAGGAGTC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315580.10
ENST00000392435.7
ENST00000442210.2
ENST00000453766.7
ENST00000539576.5
ENST00000539770.6
ENST00000542099.5
ENST00000543566.6
CDS CCA 72 bp CCACGCCTGCGCACCCGGCTCCAAACCCCTGGGAACTaGCCGCCGTCCGCCGCGAGTGGCGTCTGGGGCGCT +
Preference number: 6 (lower is better)
Translates to: PRLRTRLQTPGN*PPSAASGVWGA
Trigger: AGCGCCCCAGACGCCACTCGCGGCGGACGGCGGCCAGTTCCCAGGGGTTTGGAGCCGGGTGCGCAGGCGTGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536502.5
CDS CCA 72 bp GGAGGCCCCACGCCTGCGCACCCGGCTCCAAACCCCTaGGAACTGGCCGCCGTCCGCCGCGAGTGGCGTCTG +
Preference number: 6 (lower is better)
Translates to: GGPTPAHPAPNP*ELAAVRREWRL
Trigger: CAGACGCCACTCGCGGCGGACGGCGGCCAGTTCCCAGGGGTTTGGAGCCGGGTGCGCAGGCGTGGGGCCTCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536502.5
CDS TCA 72 bp CGGCTGCGACTCCTCGAGCGCTTGCGGGAGCCGACGTaGGCCATGGCGCCGCGGGCCGGCTCCAAACCCCTG +
Preference number: 6 (lower is better)
Translates to: RLRLLERLREPT*AMAPRAGSKPL
Trigger: CAGGGGTTTGGAGCCGGCCCGCGGCGCCATGGCTCACGTCGGCTCCCGCAAGCGCTCGAGGAGTCGCAGCCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454885.6
CDS CCA 72 bp CCTGGGAACTGGCCGCCGTCCGCCGCGAGTGGCGTCTaGGGCGCTTTCCCGCGCTCTCCTACCCTCCAGCCC +
Preference number: 6 (lower is better)
Translates to: PGNWPPSAASGV*GAFPRSPTLQP
Trigger: GGGCTGGAGGGTAGGAGAGCGCGGGAAAGCGCCCCAGACGCCACTCGCGGCGGACGGCGGCCAGTTCCCAGG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000454885.6
ENST00000536502.5
CDS CAA 90 bp CGACGTGAGCCATGGCGCCGCGGGCTGGCGACGAAGAAGACGCGCTaGAGCCGAAGCCCCCAAGGCCGGCCGCGGGCGGGCTCCAAGGGT +
Preference number: 6 (lower is better)
Translates to: RREPWRRGLATKKTR*SRSPQGRPRAGSKG
Trigger: ACCCTTGGAGCCCGCCCGCGGCCGGCCTTGGGGGCTTCGGCTCAAGCGCGTCTTCTTCGTCGCCAGCCCGCGGCGCCATGGCTCACGTCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536502.5
CDS TCA 72 bp CGGCTGCGACTCCTCGAGCGCTTGCGGGAGCCGACGTaGGCCATGGCGCCGCGGGGACTGCGAGCTCCAGAC +
Preference number: 6 (lower is better)
Translates to: RLRLLERLREPT*AMAPRGLRAPD
Trigger: GTCTGGAGCTCGCAGTCCCCGCGGCGCCATGGCTCACGTCGGCTCCCGCAAGCGCTCGAGGAGTCGCAGCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413381.6
ENST00000426960.6
CDS GCA 72 bp GCCTGTGTCTGCCGAAGCTGCGCCCACTTCCAAGGCTaGCCTCTCGGCGCACGCCCGCAGCACCCACGCCCC +
Preference number: 6 (lower is better)
Translates to: ACVCRSCAHFQG*PLGARPQHPRP
Trigger: GGGGCGTGGGTGCTGCGGGCGTGCGCCGAGAGGGCAGCCTTGGAAGTGGGCGCAGCTTCGGCAGACACAGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392435.7
ENST00000453766.7
ENST00000539770.6
ENST00000542099.5
ENST00000543566.6
CDS CCA 72 bp GCGGGCTCCAAGGGTGGCTCTAGCGGGGCCGGGGCCTaGCGACGCCCAGTACCCGTCACCGTCCCGGGAAAA +
Preference number: 6 (lower is better)
Translates to: AGSKGGSSGAGA*RRPVPVTVPGK
Trigger: TTTTCCCGGGACGGTGACGGGTACTGGGCGTCGCCAGGCCCCGGCCCCGCTAGAGCCACCCTTGGAGCCCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536502.5
CDS TCA 72 bp CGGCTGCGACTCCTCGAGCGCTTGCGGGAGCCGACGTaGGCCATGGCGCCGCGGGCTGGCGACGAAGAAGAC +
Preference number: 6 (lower is better)
Translates to: RLRLLERLREPT*AMAPRAGDEED
Trigger: GTCTTCTTCGTCGCCAGCCCGCGGCGCCATGGCTCACGTCGGCTCCCGCAAGCGCTCGAGGAGTCGCAGCCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536502.5
CDS CCA 72 bp CCAAACCCCTGGGAACTGGCCGCCGTCCGCCGCGAGTaGCGTCTGGGGCGCTTTCCCGCGCTCTCCTACCCT +
Preference number: 6 (lower is better)
Translates to: PNPWELAAVRRE*RLGRFPALSYP
Trigger: AGGGTAGGAGAGCGCGGGAAAGCGCCCCAGACGCCACTCGCGGCGGACGGCGGCCAGTTCCCAGGGGTTTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000454885.6
ENST00000536502.5
CDS CCA 72 bp GACTCCTCGAGCGCTTGCGGGAGCCGACGTGAGCCATaGCGCCGCGGGCCGGCTCCAAACCCCTGGGAACTG +
Preference number: 6 (lower is better)
Translates to: DSSSACGSRREP*RRGPAPNPWEL
Trigger: CAGTTCCCAGGGGTTTGGAGCCGGCCCGCGGCGCCATGGCTCACGTCGGCTCCCGCAAGCGCTCGAGGAGTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454885.6
CDS GCA 72 bp GGTCCTCACCCTCCGCCCCAGGGGCCGTGCTGGCCTTaGGACCTTGGGATGTGGAGGCCGAGCAGTTCCTCG +
Preference number: 6 (lower is better)
Translates to: GPHPPPQGPCWP*DLGMWRPSSSS
Trigger: CGAGGAACTGCTCGGCCTCCACATCCCAAGGTCGCAAGGCCAGCACGGCCCCTGGGGCGGAGGGTGAGGACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392433.3
ENST00000539576.5
ENST00000540382.5
ENST00000540708.5
CDS GCA 72 bp CGGCCCTCGAGCTCCGCAGCCCCTCACGCCTGTGTCTaGCGAAGCTGCGCCCACTTCCAAGGCTGCCCTCTC +
Preference number: 6 (lower is better)
Translates to: RPSSSAAPHACV*RSCAHFQGCPL
Trigger: GAGAGGGCAGCCTTGGAAGTGGGCGCAGCTTCGGCAGACACAGGCGTGAGGGGCTGCGGAGCTCGAGGGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392435.7
ENST00000453766.7
ENST00000539770.6
ENST00000542099.5
ENST00000543566.6
CDS CCA 72 bp GGGCCATCCTCTTCCTCCCCAGCTGATCGGTGCCACTaGTCCAGCGAGGGGCCCGGCAGAGCCTCCACCTGC +
Preference number: 6 (lower is better)
Translates to: GPSSSSPADRCH*SSEGPGRASTC
Trigger: GCAGGTGGAGGCTCTGCCGGGCCCCTCGCTGGACCAGTGGCACCGATCAGCTGGGGAGGAAGAGGATGGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000315580.10
ENST00000392433.3
ENST00000392435.7
ENST00000413381.6
ENST00000426960.6
ENST00000439686.6
ENST00000453766.7
ENST00000454885.6
ENST00000456762.3
ENST00000536502.5
ENST00000539576.5
ENST00000540382.5
ENST00000540708.5
ENST00000542099.5
ENST00000543566.6
CDS CCA 72 bp CGCCGCGGGGACTGCGAGCTCCAGACTGAGGCGCCCTaGTCTTTCCGACGCGCCCACCCAGTGACTCAGAGG +
Preference number: 6 (lower is better)
Translates to: RRGDCELQTEAP*SFRRAHPVTQR
Trigger: CCTCTGAGTCACTGGGTGGGCGCGTCGGAAAGACCAGGGCGCCTCAGTCTGGAGCTCGCAGTCCCCGCGGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413381.6
ENST00000426960.6
CDS GCA 72 bp AAGGTGAGGCCTCCGCCCCAGGGGCCGTGCTGGCCTTaGGACCTTGGGATGTGGAGGCCGAGCAGTTCCTCG +
Preference number: 6 (lower is better)
Translates to: KVRPPPQGPCWP*DLGMWRPSSSS
Trigger: CGAGGAACTGCTCGGCCTCCACATCCCAAGGTCGCAAGGCCAGCACGGCCCCTGGGGCGGAGGCCTCACCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315580.10
CDS CCA 72 bp AGGGAGAAGGTGAGGCCTCCGCCCCAGGGGCCGTGCTaGCCTTGCGACCTTGGGATGTGGAGGCCGAGCAGT +
Preference number: 6 (lower is better)
Translates to: REKVRPPPQGPC*PCDLGMWRPSS
Trigger: ACTGCTCGGCCTCCACATCCCAAGGTCGCAAGGCCAGCACGGCCCCTGGGGCGGAGGCCTCACCTTCTCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315580.10
CDS CCA 72 bp CCCTCCGCCCCAGGGGCCGTGCTGGCCTTGCGACCTTaGGATGTGGAGGCCGAGCAGTTCCTCGAGGTGTCT +
Preference number: 6 (lower is better)
Translates to: PSAPGAVLALRP*DVEAEQFLEVS
Trigger: AGACACCTCGAGGAACTGCTCGGCCTCCACATCCCAAGGTCGCAAGGCCAGCACGGCCCCTGGGGCGGAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392433.3
ENST00000539576.5
ENST00000540382.5
ENST00000540708.5
CDS CCA 72 bp TTCCCAGAGGAGCCCCTTCCTGGCTCCTGCGGCGCCTaGCCCTCACATCTCAGGCCCGGCTGCACAGAGGCA +
Preference number: 6 (lower is better)
Translates to: FPEEPLPGSCGA*PSHLRPGCTEA
Trigger: TGCCTCTGTGCAGCCGGGCCTGAGATGTGAGGGCCAGGCGCCGCAGGAGCCAGGAAGGGGCTCCTCTGGGAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392433.3
ENST00000539576.5
ENST00000540382.5
ENST00000540708.5
CDS CAA 72 bp GAAGGTGAGGCCTCCGCCCCAGGGGCCGTGCTGGCCTaGCGACCTTGGGATGTGGAGGCCGAGCAGTTCCTC +
Preference number: 6 (lower is better)
Translates to: EGEASAPGAVLA*RPWDVEAEQFL
Trigger: GAGGAACTGCTCGGCCTCCACATCCCAAGGTCGCAAGGCCAGCACGGCCCCTGGGGCGGAGGCCTCACCTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315580.10
CDS CAA 72 bp CTCCTCCGCCCCAGGGGCCGTGCTGGCCTTGCGACCTaGGGATGTGGAGGCCGAGCAGTTCCTCGAGGTGTC +
Preference number: 6 (lower is better)
Translates to: LLRPRGRAGLAT*GCGGRAVPRGV
Trigger: GACACCTCGAGGAACTGCTCGGCCTCCACATCCCAAGGTCGCAAGGCCAGCACGGCCCCTGGGGCGGAGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357866.4
ENST00000413381.6
ENST00000439686.6
ENST00000453766.7
CDS CAA 72 bp ACCCTCCGCCCCAGGGGCCGTGCTGGCCTTGCGACCTaGGGATGTGGAGGCCGAGCAGTTCCTCGAGGTGTC +
Preference number: 6 (lower is better)
Translates to: TLRPRGRAGLAT*GCGGRAVPRGV
Trigger: GACACCTCGAGGAACTGCTCGGCCTCCACATCCCAAGGTCGCAAGGCCAGCACGGCCCCTGGGGCGGAGGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392433.3
ENST00000539576.5
ENST00000540382.5
ENST00000540708.5
CDS CAA 72 bp TGGTCCTCACCCTCCGCCCCAGGGGCCGTGCTGGCCTaGCGACCTTGGGATGTGGAGGCCGAGCAGTTCCTC +
Preference number: 6 (lower is better)
Translates to: WSSPSAPGAVLA*RPWDVEAEQFL
Trigger: GAGGAACTGCTCGGCCTCCACATCCCAAGGTCGCAAGGCCAGCACGGCCCCTGGGGCGGAGGGTGAGGACCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392433.3
ENST00000539576.5
ENST00000540382.5
ENST00000540708.5
CDS CAA 72 bp CCCCACCTGGTGCGCCCCGTCTCAGGGTCCACCACCTaGCGGATGATGCTCTGCCGGGCATCCCACTCCTCC +
Preference number: 6 (lower is better)
Translates to: PHLVRPVSGSTT*RMMLCRASHSS
Trigger: GGAGGAGTGGGATGCCCGGCAGAGCATCATCCGCAAGGTGGTGGACCCTGAGACGGGGCGCACCAGGTGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539576.5
ENST00000540382.5
ENST00000540708.5
CDS TCA 72 bp CCTCACATCTCAGGCCCGGCTGCACAGAGGCATGACTaGGCGTCCCCGACCACTGCTCGCCCGACTTCCCCG +
Preference number: 6 (lower is better)
Translates to: PHISGPAAQRHD*ASPTTARPTSP
Trigger: CGGGGAAGTCGGGCGAGCAGTGGTCGGGGACGCTCAGTCATGCCTCTGTGCAGCCGGGCCTGAGATGTGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392433.3
ENST00000539576.5
ENST00000540382.5
ENST00000540708.5
CDS GCA 72 bp TGCTTCTCTCCTCCGCCCCAGGGGCCGTGCTGGCCTTaGGACCTTGGGATGTGGAGGCCGAGCAGTTCCTCG +
Preference number: 6 (lower is better)
Translates to: CFSPPPQGPCWP*DLGMWRPSSSS
Trigger: CGAGGAACTGCTCGGCCTCCACATCCCAAGGTCGCAAGGCCAGCACGGCCCCTGGGGCGGAGGAGAGAAGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357866.4
ENST00000413381.6
ENST00000439686.6
ENST00000453766.7
CDS CCA 72 bp TCCTCCGCCCCAGGGGCCGTGCTGGCCTTGCGACCTTaGGATGTGGAGGCCGAGCAGTTCCTCGAGGTGTCT +
Preference number: 6 (lower is better)
Translates to: SSAPGAVLALRP*DVEAEQFLEVS
Trigger: AGACACCTCGAGGAACTGCTCGGCCTCCACATCCCAAGGTCGCAAGGCCAGCACGGCCCCTGGGGCGGAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357866.4
ENST00000413381.6
ENST00000439686.6
ENST00000453766.7
CDS CCA 72 bp ACCTCCGCCCCAGGGGCCGTGCTGGCCTTGCGACCTTaGGATGTGGAGGCCGAGCAGTTCCTCGAGGTGTCT +
Preference number: 6 (lower is better)
Translates to: TSAPGAVLALRP*DVEAEQFLEVS
Trigger: AGACACCTCGAGGAACTGCTCGGCCTCCACATCCCAAGGTCGCAAGGCCAGCACGGCCCCTGGGGCGGAGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442210.2
ENST00000539770.6
CDS CAA 72 bp AACCTCCGCCCCAGGGGCCGTGCTGGCCTTGCGACCTaGGGATGTGGAGGCCGAGCAGTTCCTCGAGGTGTC +
Preference number: 6 (lower is better)
Translates to: NLRPRGRAGLAT*GCGGRAVPRGV
Trigger: GACACCTCGAGGAACTGCTCGGCCTCCACATCCCAAGGTCGCAAGGCCAGCACGGCCCCTGGGGCGGAGGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442210.2
ENST00000539770.6
CDS CAA 90 bp GTGGTCCTCACCCTCCGCCCCAGGGGCCGTGCTGGCCTTGCGACCTaGGGATGTGGAGGCCGAGCAGTTCCTCGAGGTGTCTTTCCTGCT +
Preference number: 6 (lower is better)
Translates to: VVLTLRPRGRAGLAT*GCGGRAVPRGVFPA
Trigger: AGCAGGAAAGACACCTCGAGGAACTGCTCGGCCTCCACATCCCAAGGTCGCAAGGCCAGCACGGCCCCTGGGGCGGAGGGTGAGGACCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392433.3
ENST00000539576.5
ENST00000540382.5
ENST00000540708.5
CDS TCA 72 bp CTGAGGCGCCCTGGTCTTTCCGACGCGCCCACCCAGTaGCTCAGAGGTCGCAAACTCGTGTCCGTAGGGGCC +
Preference number: 6 (lower is better)
Translates to: LRRPGLSDAPTQ*LRGRKLVSVGA
Trigger: GGCCCCTACGGACACGAGTTTGCGACCTCTGAGTCACTGGGTGGGCGCGTCGGAAAGACCAGGGCGCCTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000392435.7
ENST00000413381.6
ENST00000426960.6
ENST00000453766.7
ENST00000539770.6
ENST00000542099.5
ENST00000543566.6
CDS TCA 72 bp GGTCCTGCCCTCTCCATACGACTGCGAGCTCCAGACTaGGGCGCCCTGGTCTTTCCGACGCGCCCACCCAGT +
Preference number: 6 (lower is better)
Translates to: GPALSIRLRAPD*GALVFPTRPPS
Trigger: ACTGGGTGGGCGCGTCGGAAAGACCAGGGCGCCTCAGTCTGGAGCTCGCAGTCGTATGGAGAGGGCAGGACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392435.7
ENST00000453766.7
ENST00000539770.6
ENST00000542099.5
ENST00000543566.6
CDS GCA 72 bp CCTCCTCCCCGGCTGGTCCTGCCCTCTCCATACGACTaGGAGCTCCAGACTGAGGCGCCCTGGTCTTTCCGA +
Preference number: 6 (lower is better)
Translates to: PPPRLVLPSPYD*ELQTEAPWSFR
Trigger: TCGGAAAGACCAGGGCGCCTCAGTCTGGAGCTCGCAGTCGTATGGAGAGGGCAGGACCAGCCGGGGAGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392435.7
ENST00000453766.7
ENST00000539770.6
ENST00000542099.5
ENST00000543566.6
CDS GCA 72 bp CTAGAAGAACCTCCGCCCCAGGGGCCGTGCTGGCCTTaGGACCTTGGGATGTGGAGGCCGAGCAGTTCCTCG +
Preference number: 6 (lower is better)
Translates to: LEEPPPQGPCWP*DLGMWRPSSSS
Trigger: CGAGGAACTGCTCGGCCTCCACATCCCAAGGTCGCAAGGCCAGCACGGCCCCTGGGGCGGAGGTTCTTCTAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442210.2
ENST00000539770.6
CDS CCA 72 bp CCCCAGGGGCCGTGCTGGCCTTGCGACCTTGGGATGTaGAGGCCGAGCAGTTCCTCGAGGTGTCTTTCCTGC +
Preference number: 6 (lower is better)
Translates to: PQGPCWPCDLGM*RPSSSSRCLSC
Trigger: GCAGGAAAGACACCTCGAGGAACTGCTCGGCCTCCACATCCCAAGGTCGCAAGGCCAGCACGGCCCCTGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000315580.10
ENST00000357866.4
ENST00000392433.3
ENST00000413381.6
ENST00000439686.6
ENST00000442210.2
ENST00000453766.7
ENST00000539576.5
ENST00000539770.6
ENST00000540382.5
ENST00000540708.5
CDS CCA 72 bp TCTGCTTGCTTCTCTCCTCCGCCCCAGGGGCCGTGCTaGCCTTGCGACCTTGGGATGTGGAGGCCGAGCAGT +
Preference number: 6 (lower is better)
Translates to: SACFSPPPQGPC*PCDLGMWRPSS
Trigger: ACTGCTCGGCCTCCACATCCCAAGGTCGCAAGGCCAGCACGGCCCCTGGGGCGGAGGAGAGAAGCAAGCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357866.4
ENST00000413381.6
ENST00000439686.6
ENST00000453766.7
CDS CCA 72 bp GAGGAGCTAGAAGAACCTCCGCCCCAGGGGCCGTGCTaGCCTTGCGACCTTGGGATGTGGAGGCCGAGCAGT +
Preference number: 6 (lower is better)
Translates to: EELEEPPPQGPC*PCDLGMWRPSS
Trigger: ACTGCTCGGCCTCCACATCCCAAGGTCGCAAGGCCAGCACGGCCCCTGGGGCGGAGGTTCTTCTAGCTCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442210.2
ENST00000539770.6
CDS CAA 72 bp TTGCTTCTCTCCTCCGCCCCAGGGGCCGTGCTGGCCTaGCGACCTTGGGATGTGGAGGCCGAGCAGTTCCTC +
Preference number: 6 (lower is better)
Translates to: LLLSSAPGAVLA*RPWDVEAEQFL
Trigger: GAGGAACTGCTCGGCCTCCACATCCCAAGGTCGCAAGGCCAGCACGGCCCCTGGGGCGGAGGAGAGAAGCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357866.4
ENST00000413381.6
ENST00000439686.6
ENST00000453766.7
CDS CAA 72 bp GCTAGAAGAACCTCCGCCCCAGGGGCCGTGCTGGCCTaGCGACCTTGGGATGTGGAGGCCGAGCAGTTCCTC +
Preference number: 6 (lower is better)
Translates to: ARRTSAPGAVLA*RPWDVEAEQFL
Trigger: GAGGAACTGCTCGGCCTCCACATCCCAAGGTCGCAAGGCCAGCACGGCCCCTGGGGCGGAGGTTCTTCTAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442210.2
ENST00000539770.6
CDS CAA 90 bp GCCTTCTGCTTGCTTCTCTCCTCCGCCCCAGGGGCCGTGCTGGCCTaGCGACCTTGGGATGTGGAGGCCGAGCAGTTCCTCGAGGTGTCT +
Preference number: 6 (lower is better)
Translates to: AFCLLLSSAPGAVLA*RPWDVEAEQFLEVS
Trigger: AGACACCTCGAGGAACTGCTCGGCCTCCACATCCCAAGGTCGCAAGGCCAGCACGGCCCCTGGGGCGGAGGAGAGAAGCAAGCAGAAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357866.4
ENST00000413381.6
ENST00000439686.6
ENST00000453766.7
CDS TCA 72 bp TGGTGCGCCCCGTCTCAGGGTCCACCACCTTGCGGATaGTGCTCTGCCGGGCATCCCACTCCTCCTTGGTCA +
Preference number: 6 (lower is better)
Translates to: WCAPSQGPPPCG*CSAGHPTPPWS
Trigger: TGACCAAGGAGGAGTGGGATGCCCGGCAGAGCATCATCCGCAAGGTGGTGGACCCTGAGACGGGGCGCACCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000315580.10
ENST00000392433.3
ENST00000392435.7
ENST00000413381.6
ENST00000426960.6
ENST00000439686.6
ENST00000453766.7
ENST00000454885.6
ENST00000456762.3
ENST00000536073.1
ENST00000536502.5
ENST00000539576.5
ENST00000540382.5
ENST00000540708.5
ENST00000542099.5
ENST00000543566.6
CDS GCA 72 bp GAGGAGGAGCTGGATCTTGTTCTCCTCCGGGCCTTCTaGTTGCTTCTCTCCTCCGCCCCAGGGGCCGTGCTG +
Preference number: 6 (lower is better)
Translates to: EEELDLVLLRAF*LLLSSAPGAVL
Trigger: CAGCACGGCCCCTGGGGCGGAGGAGAGAAGCAAGCAGAAGGCCCGGAGGAGAACAAGATCCAGCTCCTCCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357866.4
ENST00000413381.6
ENST00000439686.6
ENST00000453766.7
CDS CAA 72 bp ATAAGCCTGGTGCGCCCCGTCTCAGGGTCCACCACCTaGCGGATGATGCTCTGCCGGGCATCCCACTCCTCC +
Preference number: 6 (lower is better)
Translates to: ISLVRPVSGSTT*RMMLCRASHSS
Trigger: GGAGGAGTGGGATGCCCGGCAGAGCATCATCCGCAAGGTGGTGGACCCTGAGACGGGGCGCACCAGGCTTAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000315580.10
ENST00000392433.3
ENST00000392435.7
ENST00000413381.6
ENST00000426960.6
ENST00000439686.6
ENST00000453766.7
ENST00000454885.6
ENST00000456762.3
ENST00000536073.1
ENST00000536502.5
ENST00000543566.6
CDS CAA 90 bp CTTGCTTCTCTCCTCCGCCCCAGGGGCCGTGCTGGCCTTGCGACCTaGGGATGTGGAGGCCGAGCAGTTCCTCGAGGTGTCTTTCCTGCT +
Preference number: 6 (lower is better)
Translates to: LASLLRPRGRAGLAT*GCGGRAVPRGVFPA
Trigger: AGCAGGAAAGACACCTCGAGGAACTGCTCGGCCTCCACATCCCAAGGTCGCAAGGCCAGCACGGCCCCTGGGGCGGAGGAGAGAAGCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357866.4
ENST00000413381.6
ENST00000439686.6
ENST00000453766.7
CDS TCA 72 bp GCTCTGGCCTGGGGCAGGCACAGACCGGCTACAGGGTaGGCGCTTCCTGAGGGGCTTTCCAGAACAGAGATG +
Preference number: 6 (lower is better)
Translates to: ALAWGRHRPATG*ALPEGLSRTEM
Trigger: CATCTCTGTTCTGGAAAGCCCCTCAGGAAGCGCTCACCCTGTAGCCGGTCTGTGCCTGCCCCAGGCCAGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392433.3
ENST00000539576.5
ENST00000540382.5
ENST00000540708.5
CDS GCA 72 bp CCCGTCTCAGGGTCCACCACCTTGCGGATGATGCTCTaGCGGGCATCCCACTCCTCCTTGGTCATGGGCTTC +
Preference number: 6 (lower is better)
Translates to: PVSGSTTLRMML*RASHSSLVMGF
Trigger: GAAGCCCATGACCAAGGAGGAGTGGGATGCCCGGCAGAGCATCATCCGCAAGGTGGTGGACCCTGAGACGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000315580.10
ENST00000392433.3
ENST00000392435.7
ENST00000413381.6
ENST00000426960.6
ENST00000439686.6
ENST00000453766.7
ENST00000454885.6
ENST00000456762.3
ENST00000536073.1
ENST00000536502.5
ENST00000539576.5
ENST00000540382.5
ENST00000540708.5
ENST00000542099.5
ENST00000543566.6
CDS CCA 72 bp TCTCCATACGACTGCGAGCTCCAGACTGAGGCGCCCTaGTCTTTCCGACGCGCCCACCCAGTGACTCAGAGG +
Preference number: 6 (lower is better)
Translates to: SPYDCELQTEAP*SFRRAHPVTQR
Trigger: CCTCTGAGTCACTGGGTGGGCGCGTCGGAAAGACCAGGGCGCCTCAGTCTGGAGCTCGCAGTCGTATGGAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392435.7
ENST00000453766.7
ENST00000539770.6
ENST00000542099.5
ENST00000543566.6
CDS CAA 72 bp GGTCGCAAACTCGTGTCCGTAGGGGCCAGAAAGATCTaGGCAGTGAGCGCGGGCATGGACCCCAGGCCCATC +
Preference number: 6 (lower is better)
Translates to: GRKLVSVGARKI*AVSAGMDPRPI
Trigger: GATGGGCCTGGGGTCCATGCCCGCGCTCACTGCCAAGATCTTTCTGGCCCCTACGGACACGAGTTTGCGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000392435.7
ENST00000413381.6
ENST00000453766.7
ENST00000539770.6
ENST00000542099.5
ENST00000543566.6
CDS CAA 90 bp AGAAGAGGAGCTAGAAGAACCTCCGCCCCAGGGGCCGTGCTGGCCTaGCGACCTTGGGATGTGGAGGCCGAGCAGTTCCTCGAGGTGTCT +
Preference number: 6 (lower is better)
Translates to: RRGARRTSAPGAVLA*RPWDVEAEQFLEVS
Trigger: AGACACCTCGAGGAACTGCTCGGCCTCCACATCCCAAGGTCGCAAGGCCAGCACGGCCCCTGGGGCGGAGGTTCTTCTAGCTCCTCTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442210.2
ENST00000539770.6
CDS TCA 72 bp GGGCAGGCACAGACCGGCTACAGGGTGAGCGCTTCCTaGGGGGCTTTCCAGAACAGAGATGGAGCTTCCCAG +
Preference number: 6 (lower is better)
Translates to: GQAQTGYRVSAS*GAFQNRDGASQ
Trigger: CTGGGAAGCTCCATCTCTGTTCTGGAAAGCCCCTCAGGAAGCGCTCACCCTGTAGCCGGTCTGTGCCTGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000392433.3
ENST00000539576.5
ENST00000540382.5
ENST00000540708.5
CDS CAA 90 bp TCTCCCTTAATAAGCCTGGTGCGCCCCGTCTCAGGGTCCACCACCTaGCGGATGATGCTCTGCCGGGCATCCCACTCCTCCTTGGTCATG +
Preference number: 6 (lower is better)
Translates to: SPLISLVRPVSGSTT*RMMLCRASHSSLVM
Trigger: CATGACCAAGGAGGAGTGGGATGCCCGGCAGAGCATCATCCGCAAGGTGGTGGACCCTGAGACGGGGCGCACCAGGCTTATTAAGGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000315580.10
ENST00000392433.3
ENST00000392435.7
ENST00000413381.6
ENST00000426960.6
ENST00000439686.6
ENST00000453766.7
ENST00000454885.6
ENST00000456762.3
ENST00000536073.1
ENST00000536502.5
ENST00000543566.6
CDS GCA 72 bp GCTCCAGCTGATACGTGCAACGTGGCATGGGGCTGGTaGCCCACCTTCCCAGGGAGACCAAACTCAAGACTG +
Preference number: 6 (lower is better)
Translates to: APADTCNVAWGW*PTFPGRPNSRL
Trigger: CAGTCTTGAGTTTGGTCTCCCTGGGAAGGTGGGGCACCAGCCCCATGCCACGTTGCACGTATCAGCTGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543566.6
CDS CCA 72 bp ATCTGGAAGGCCAGGCAGTCCCCTCGGGTGGCTTGCTaGGGAAGAAAGCACACAGGAGGAGGGGTACATCAC +
Preference number: 6 (lower is better)
Translates to: IWKARQSPRVAC*GRKHTGGGVHH
Trigger: GTGATGTACCCCTCCTCCTGTGTGCTTTCTTCCCCAGCAAGCCACCCGAGGGGACTGCCTGGCCTTCCAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000392433.3
ENST00000392435.7
ENST00000442210.2
ENST00000456762.3
ENST00000536073.1
ENST00000540708.5
CDS CCA 72 bp CAGGATTCTGCTCCAGCTGATACGTGCAACGTGGCATaGGGCTGGTGCCCCACCTTCCCAGGGAGACCAAAC +
Preference number: 6 (lower is better)
Translates to: QDSAPADTCNVA*GWCPTFPGRPN
Trigger: GTTTGGTCTCCCTGGGAAGGTGGGGCACCAGCCCCATGCCACGTTGCACGTATCAGCTGGAGCAGAATCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543566.6
CDS CAA 90 bp TCCACCACCTTGCGGATGATGCTCTGCCGGGCATCCCACTCCTCCTaGGTCATGGGCTTCATGGCCTGGATTCGGGACTTCTGCTCATCC +
Preference number: 6 (lower is better)
Translates to: STTLRMMLCRASHSS*VMGFMAWIRDFCSS
Trigger: GGATGAGCAGAAGTCCCGAATCCAGGCCATGAAGCCCATGACCAAGGAGGAGTGGGATGCCCGGCAGAGCATCATCCGCAAGGTGGTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000315580.10
ENST00000392433.3
ENST00000392435.7
ENST00000413381.6
ENST00000426960.6
ENST00000439686.6
ENST00000453766.7
ENST00000454885.6
ENST00000456762.3
ENST00000536073.1
ENST00000536502.5
ENST00000539576.5
ENST00000540382.5
ENST00000540708.5
ENST00000542099.5
ENST00000543566.6
CDS GCA 72 bp GAGGAGGAGCTGGATCTTGTTCTCCTCCGGGCCTTCTaGTTGCTTCTCTCTTGGGATGTGGAGGCCGAGCAG +
Preference number: 6 (lower is better)
Translates to: EEELDLVLLRAF*LLLSWDVEAEQ
Trigger: CTGCTCGGCCTCCACATCCCAAGAGAGAAGCAAGCAGAAGGCCCGGAGGAGAACAAGATCCAGCTCCTCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000392435.7
ENST00000412505.6
ENST00000426960.6
ENST00000456762.3
ENST00000536502.5
ENST00000543566.6
CDS CCA 72 bp TCTGCTCCAGCTGATACGTGCAACGTGGCATGGGGCTaGTGCCCCACCTTCCCAGGGAGACCAAACTCAAGA +
Preference number: 6 (lower is better)
Translates to: SAPADTCNVAWG*CPTFPGRPNSR
Trigger: TCTTGAGTTTGGTCTCCCTGGGAAGGTGGGGCACCAGCCCCATGCCACGTTGCACGTATCAGCTGGAGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543566.6
CDS CAA 72 bp TTGCGGATGATGCTCTGCCGGGCATCCCACTCCTCCTaGGTCATGGGCTTCATGGCCTGGATTCGGGACTTC +
Preference number: 6 (lower is better)
Translates to: LRMMLCRASHSS*VMGFMAWIRDF
Trigger: GAAGTCCCGAATCCAGGCCATGAAGCCCATGACCAAGGAGGAGTGGGATGCCCGGCAGAGCATCATCCGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000315580.10
ENST00000392433.3
ENST00000392435.7
ENST00000413381.6
ENST00000426960.6
ENST00000439686.6
ENST00000453766.7
ENST00000454885.6
ENST00000456762.3
ENST00000536073.1
ENST00000536502.5
ENST00000539576.5
ENST00000540382.5
ENST00000540708.5
ENST00000542099.5
ENST00000543566.6
CDS CAA 90 bp GAGGGGCCCGGCAGAGCCTCCACCTGCTGTGCTTCCGCCTTCTCCTaGCCCTTCTTCTTCAGCTTCTTCCTCTTCTTCTTCTTCTTCCTC +
Preference number: 6 (lower is better)
Translates to: EGPGRASTCCASAFS*PFFFSFFLFFFFFL
Trigger: GAGGAAGAAGAAGAAGAAGAGGAAGAAGCTGAAGAAGAAGGGCAAGGAGAAGGCGGAAGCACAGCAGGTGGAGGCTCTGCCGGGCCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000315580.10
ENST00000392433.3
ENST00000392435.7
ENST00000413381.6
ENST00000426960.6
ENST00000439686.6
ENST00000453766.7
ENST00000454885.6
ENST00000456762.3
ENST00000536502.5
ENST00000539576.5
ENST00000540382.5
ENST00000540708.5
ENST00000542099.5
ENST00000543566.6
CDS GCA 72 bp TTGGTCATGGGCTTCATGGCCTGGATTCGGGACTTCTaGTCATCCGTCAGGACTGGGCCATCCTCTTCCTCC +
Preference number: 6 (lower is better)
Translates to: LVMGFMAWIRDF*SSVRTGPSSSS
Trigger: GGAGGAAGAGGATGGCCCAGTCCTGACGGATGAGCAGAAGTCCCGAATCCAGGCCATGAAGCCCATGACCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000315580.10
ENST00000392433.3
ENST00000392435.7
ENST00000413381.6
ENST00000426960.6
ENST00000439686.6
ENST00000453766.7
ENST00000454885.6
ENST00000456762.3
ENST00000536502.5
ENST00000539576.5
ENST00000540382.5
ENST00000540708.5
ENST00000542099.5
ENST00000543566.6
CDS GCA 72 bp GAGGAGGAGCTGGATCTTGTTCTCCTCCGGGCCTTCTaGTTGCTTCTCTCTGTGATGCAGGGAGAAGGTGAG +
Preference number: 6 (lower is better)
Translates to: EEELDLVLLRAF*LLLSVMQGEGE
Trigger: CTCACCTTCTCCCTGCATCACAGAGAGAAGCAAGCAGAAGGCCCGGAGGAGAACAAGATCCAGCTCCTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000315580.10
ENST00000392433.3
ENST00000454885.6
ENST00000539576.5
ENST00000540382.5
ENST00000540708.5
ENST00000542099.5
CDS GCA 72 bp CTCAGGGTCCACCACCTTGCGGATGATGCTCTGCTGTaGTTCCGCCTTCTCCTTGCCCTTCTTCTTCAGCTT +
Preference number: 6 (lower is better)
Translates to: LRVHHLADDALL*FRLLLALLLQL
Trigger: AAGCTGAAGAAGAAGGGCAAGGAGAAGGCGGAAGCACAGCAGAGCATCATCCGCAAGGTGGTGGACCCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357866.4
ENST00000412505.6
ENST00000442210.2
ENST00000539770.6
CDS CCA 72 bp AGAGCACACATCTTCAGCCAACACTCCCAGATCCTGTaGTGTAAGTCAGGCCGAAAGCTCCCCACCTGGTGC +
Preference number: 6 (lower is better)
Translates to: RAHIFSQHSQIL*CKSGRKLPTWC
Trigger: GCACCAGGTGGGGAGCTTTCGGCCTGACTTACACCACAGGATCTGGGAGTGTTGGCTGAAGATGTGTGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539576.5
ENST00000540382.5
ENST00000540708.5
CDS CAA 72 bp GAGGAGCTGGATCTTGTTCTCCTCCGGGCCTTCTGCTaGCTTCTCTCTGTGATGCAGGGAGAAGGTGAGGCT +
Preference number: 6 (lower is better)
Translates to: EELDLVLLRAFC*LLSVMQGEGEA
Trigger: AGCCTCACCTTCTCCCTGCATCACAGAGAGAAGCAAGCAGAAGGCCCGGAGGAGAACAAGATCCAGCTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000392433.3
ENST00000454885.6
ENST00000539576.5
ENST00000540382.5
ENST00000540708.5
ENST00000542099.5
CDS CAA 72 bp GGGCGGATGGCAGGCAGAGGGGCCACACCCACCTTGTaGATCTCTCTGTGTCGTTCTTTGGTTACGATTTCC +
Preference number: 6 (lower is better)
Translates to: GRMAGRGATPTL*ISLCRSLVTIS
Trigger: GGAAATCGTAACCAAAGAACGACACAGAGAGATCAACAAGGTGGGTGTGGCCCCTCTGCCTGCCATCCGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392433.3
ENST00000392435.7
ENST00000442210.2
ENST00000456762.3
ENST00000536073.1
ENST00000540708.5
CDS TCA 72 bp GGCGGATGGCAGGCAGAGGGGCCACACCCACCTTGTTaGTCTCTCTGTGTCGTTCTTTGGTTACGATTTCCT +
Preference number: 6 (lower is better)
Translates to: GGWQAEGPHPPC*SLCVVLWLRFP
Trigger: AGGAAATCGTAACCAAAGAACGACACAGAGAGATCAACAAGGTGGGTGTGGCCCCTCTGCCTGCCATCCGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392433.3
ENST00000392435.7
ENST00000442210.2
ENST00000456762.3
ENST00000536073.1
ENST00000540708.5
CDS GCA 72 bp GCAGAGCCTCCACCTGCTGTGCTTCCGCCTTCTCCTTaGCCTTCTTCTTCAGCTTCTTCCTCTTCTTCTTCT +
Preference number: 6 (lower is better)
Translates to: AEPPPAVLPPSP*PSSSASSSSSS
Trigger: AGAAGAAGAAGAGGAAGAAGCTGAAGAAGAAGGGCAAGGAGAAGGCGGAAGCACAGCAGGTGGAGGCTCTGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000315580.10
ENST00000392433.3
ENST00000392435.7
ENST00000413381.6
ENST00000426960.6
ENST00000439686.6
ENST00000453766.7
ENST00000454885.6
ENST00000456762.3
ENST00000536502.5
ENST00000539576.5
ENST00000540382.5
ENST00000540708.5
ENST00000542099.5
ENST00000543566.6
CDS CAA 72 bp GCCACACCCACCTTGTTGATCTCTCTGTGTCGTTCTTaGGTTACGATTTCCTCTAGGACCTCGCCATCTCCC +
Preference number: 6 (lower is better)
Translates to: ATPTLLISLCRS*VTISSRTSPSP
Trigger: GGGAGATGGCGAGGTCCTAGAGGAAATCGTAACCAAAGAACGACACAGAGAGATCAACAAGGTGGGTGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000392433.3
ENST00000392435.7
ENST00000442210.2
ENST00000456762.3
ENST00000536073.1
ENST00000540708.5
CDS CAA 90 bp TCCACCACCTTGCGGATGATGCTCTGCTGTGCTTCCGCCTTCTCCTaGCCCTTCTTCTTCAGCTTCTTCCTCTTCTTCTTCTTCTTCCTC +
Preference number: 6 (lower is better)
Translates to: STTLRMMLCCASAFS*PFFFSFFLFFFFFL
Trigger: GAGGAAGAAGAAGAAGAAGAGGAAGAAGCTGAAGAAGAAGGGCAAGGAGAAGGCGGAAGCACAGCAGAGCATCATCCGCAAGGTGGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357866.4
ENST00000412505.6
ENST00000442210.2
ENST00000539770.6
CDS CAA 90 bp GGCAGAGGGGCCACACCCACCTTGTTGATCTCTCTGTGTCGTTCTTaGGTTACGATTTCCTCTAGGACCTCGCCATCTCCCTTAATAAGC +
Preference number: 6 (lower is better)
Translates to: GRGATPTLLISLCRS*VTISSRTSPSPLIS
Trigger: GCTTATTAAGGGAGATGGCGAGGTCCTAGAGGAAATCGTAACCAAAGAACGACACAGAGAGATCAACAAGGTGGGTGTGGCCCCTCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392433.3
ENST00000392435.7
ENST00000442210.2
ENST00000456762.3
ENST00000536073.1
ENST00000540708.5
CDS CAA 72 bp TTGCGGATGATGCTCTGCTGTGCTTCCGCCTTCTCCTaGCCCTTCTTCTTCAGCTTCTTCCTCTTCTTCTTC +
Preference number: 6 (lower is better)
Translates to: LRMMLCCASAFS*PFFFSFFLFFF
Trigger: GAAGAAGAAGAGGAAGAAGCTGAAGAAGAAGGGCAAGGAGAAGGCGGAAGCACAGCAGAGCATCATCCGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357866.4
ENST00000412505.6
ENST00000442210.2
ENST00000539770.6
CDS CCA 72 bp CACCTTCCCAGGGAGACCAAACTCAAGACTGCAATATaGAAGCCCCCTGAGTTTCAAATGTGTAACCCAAAG +
Preference number: 6 (lower is better)
Translates to: HLPRETKLKTAI*KPPEFQMCNPK
Trigger: CTTTGGGTTACACATTTGAAACTCAGGGGGCTTCCATATTGCAGTCTTGAGTTTGGTCTCCCTGGGAAGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543566.6