RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ARHGEF7 (Homo sapiens)

Ensembl gene IDs: ENSG00000102606

Ensembl transcript IDs: ENST00000218789.9, ENST00000317133.9, ENST00000375723.5, ENST00000375736.8, ENST00000375739.6, ENST00000375741.6, ENST00000422836.2, ENST00000426073.6, ENST00000426768.2, ENST00000449979.5, ENST00000466143.5, ENST00000467053.5, ENST00000469877.5, ENST00000478679.5, ENST00000483189.1, ENST00000483540.1, ENST00000491688.1, ENST00000491775.5, ENST00000544132.2, ENST00000646102.1, ENST00000646102.2

Found 1644 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGGCAGCGTGTGGTAGGCGGGCGTCAGCGGCGCGGGCTTGCTGTCTaGGTGCTTGCTGGACGGAGTGACCGGGTGGGAGGGGAGGGTATG +
Preference number: 1 (lower is better)
Translates to: GQRVVGGRQRRGLAV*VLAGRSDRVGGEGM
Trigger: CATACCCTCCCCTCCCACCCGGTCACTCCGTCCAGCAAGCACGCAGACAGCAAGCCCGCGCCGCTGACGCCCGCCTACCACACGCTGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469877.5
3UTR CCA 90 bp GCCGGGCTTCCTGCCCAGGACCGCACAGGCTTTCCAGAGCCAGCCTaGGCCCAGCGAGCCGCGGTGAGGACAGGCTTCGTCTCCTCTGCA +
Preference number: 1 (lower is better)
Translates to: AGLPAQDRTGFPEPA*AQRAAVRTGFVSSA
Trigger: TGCAGAGGAGACGAAGCCTGTCCTCACCGCGGCTCGCTGGGCCCAGGCTGGCTCTGGAAAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR TCA 90 bp ACCGCACAGGCTTTCCAGAGCCAGCCTGGGCCCAGCGAGCCGCGGTaGGGACAGGCTTCGTCTCCTCTGCACTGGAACACAGTGGGGGAA +
Preference number: 1 (lower is better)
Translates to: TAQAFQSQPGPSEPR*GQASSPLHWNTVGE
Trigger: TTCCCCCACTGTGTTCCAGTGCAGAGGAGACGAAGCCTGTCCTCACCGCGGCTCGCTGGGCCCAGGCTGGCTCTGGAAAGCCTGTGCGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR GCA 90 bp AGCCTGGGCCCAGCGAGCCGCGGTGAGGACAGGCTTCGTCTCCTCTaGACTGGAACACAGTGGGGGAAACGTTCCCTGCTTATGCCTATG +
Preference number: 1 (lower is better)
Translates to: SLGPASRGEDRLRLL*TGTQWGKRSLLMPM
Trigger: CATAGGCATAAGCAGGGAACGTTTCCCCCACTGTGTTCCAGTGCAGAGGAGACGAAGCCTGTCCTCACCGCGGCTCGCTGGGCCCAGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR CCA 90 bp TTCACGGCCACAACGCAGCACACAGAAGAGCACAGAGCCGTGAGGTaGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGCAC +
Preference number: 1 (lower is better)
Translates to: FTATTQHTEEHRAVR*RQALNTRDARPSVH
Trigger: GTGCACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGCTCTGTGCTCTTCTGTGTGCTGCGTTGTGGCCGTGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR TCA 90 bp ACTGAAGCCTGCTGGCTACGGCCAATGGTGGAGGAGACCTCGGGATaGGGCTGGCCTGATGACAAAACTCCACCCATCAGTATCAGCCTG +
Preference number: 1 (lower is better)
Translates to: TEACWLRPMVEETSG*GWPDDKTPPISISL
Trigger: CAGGCTGATACTGATGGGTGGAGTTTTGTCATCAGGCCAGCCTCATCCCGAGGTCTCCTCCACCATTGGCCGTAGCCAGCAGGCTTCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR GCA 90 bp CCAGGCAGACAACGTGACCAGTCACGGAAGGAAGCCAAAGGGGCTTaGTGGGCACCAGAGACTGTAATTAGCAAGGGCAAGGAAGAACCG +
Preference number: 1 (lower is better)
Translates to: PGRQRDQSRKEAKGA*WAPETVISKGKEEP
Trigger: CGGTTCTTCCTTGCCCTTGCTAATTACAGTCTCTGGTGCCCAGCAAGCCCCTTTGGCTTCCTTCCGTGACTGGTCACGTTGTCTGCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR TCA 90 bp TCTAGGGCCACACGGAGCAGAAGCAGCTTCCCACCCAAGCACCTCTaGACTGTGCGTGAGGAGGCACAATTCAGGGTTGTTTCTCGAGAA +
Preference number: 1 (lower is better)
Translates to: SRATRSRSSFPPKHL*TVREEAQFRVVSRE
Trigger: TTCTCGAGAAACAACCCTGAATTGTGCCTCCTCACGCACAGTTCAGAGGTGCTTGGGTGGGAAGCTGCTTCTGCTCCGTGTGGCCCTAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544132.2
3UTR GCA 90 bp CTGCGGAACGAACCAGGCATCCACCAGGCTTCTGCTTCCGGTGGATaGGGGCATGGGACTTCTTATTCACGTAGCTGGAAAGGACATTCT +
Preference number: 1 (lower is better)
Translates to: LRNEPGIHQASASGG*GHGTSYSRSWKGHS
Trigger: AGAATGTCCTTTCCAGCTACGTGAATAAGAAGTCCCATGCCCGCATCCACCGGAAGCAGAAGCCTGGTGGATGCCTGGTTCGTTCCGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR CCA 90 bp AGCGGACAAGAGCAAACACCTCTAGGTGGATGCGGCAGTGCCGTATaGGCCTTCCTTGAGGTCAAGACTGAGTCTGTCAGCCAGCAAGTT +
Preference number: 1 (lower is better)
Translates to: SGQEQTPLGGCGSAV*AFLEVKTESVSQQV
Trigger: AACTTGCTGGCTGACAGACTCAGTCTTGACCTCAAGGAAGGCCCATACGGCACTGCCGCATCCACCTAGAGGTGTTTGCTCTTGTCCGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR CCA 90 bp AGCCGCGGTGAGGACAGGCTTCGTCTCCTCTGCACTGGAACACAGTaGGGGAAACGTTCCCTGCTTATGCCTATGTTACTTAGTGGAACC +
Preference number: 1 (lower is better)
Translates to: SRGEDRLRLLCTGTQ*GKRSLLMPMLLSGT
Trigger: GGTTCCACTAAGTAACATAGGCATAAGCAGGGAACGTTTCCCCCACTGTGTTCCAGTGCAGAGGAGACGAAGCCTGTCCTCACCGCGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR TCA 90 bp CCAAGTGCAGCAACTGTGTTTGAGTGTTGTGGTCTACACAGCCCATaGCACAGGCAACCCACGCCTACGAGAAGGCAAAGGCAGCTTAGC +
Preference number: 1 (lower is better)
Translates to: PSAATVFECCGLHSP*HRQPTPTRRQRQLS
Trigger: GCTAAGCTGCCTTTGCCTTCTCGTAGGCGTGGGTTGCCTGTGTCATGGGCTGTGTAGACCACAACACTCAAACACAGTTGCTGCACTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR GCA 90 bp ATGGTGGGGTTTCCCACAGACGTGACCTTCGTTTGCTTCTGTAGGTaGTCCACCCATTCCTGCAGATCCTGCTGGTTGTTGCACGACACT +
Preference number: 1 (lower is better)
Translates to: MVGFPTDVTFVCFCR*STHSCRSCWLLHDT
Trigger: AGTGTCGTGCAACAACCAGCAGGATCTGCAGGAATGGGTGGAGCACCTACAGAAGCAAACGAAGGTCACGTCTGTGGGAAACCCCACCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469877.5
3UTR GCA 90 bp CCACACGGAGCAGAAGCAGCTTCCCACCCAAGCACCTCTGAACTGTaGGTGAGGAGGCACAATTCAGGGTTGTTTCTCGAGAACACTCAT +
Preference number: 1 (lower is better)
Translates to: PHGAEAASHPSTSEL*VRRHNSGLFLENTH
Trigger: ATGAGTGTTCTCGAGAAACAACCCTGAATTGTGCCTCCTCACGCACAGTTCAGAGGTGCTTGGGTGGGAAGCTGCTTCTGCTCCGTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544132.2
3UTR CCA 90 bp TCTGCTTCCGGTGGATGCGGGCATGGGACTTCTTATTCACGTAGCTaGAAAGGACATTCTAGCATGGGGATTAGCCCGGACAGAACCACC +
Preference number: 1 (lower is better)
Translates to: SASGGCGHGTSYSRS*KGHSSMGISPDRTT
Trigger: GGTGGTTCTGTCCGGGCTAATCCCCATGCTAGAATGTCCTTTCCAGCTACGTGAATAAGAAGTCCCATGCCCGCATCCACCGGAAGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR TCA 90 bp TGCTTTATTCTTGCTGAAGGAGGGGATTTTACTTTCGGTGAGCACTaGAGCCTGCTGGCTACGGCCAATGGTGGAGGAGACCTCGGGATG +
Preference number: 1 (lower is better)
Translates to: CFILAEGGDFTFGEH*SLLATANGGGDLGM
Trigger: CATCCCGAGGTCTCCTCCACCATTGGCCGTAGCCAGCAGGCTTCAGTGCTCACCGAAAGTAAAATCCCCTCCTTCAGCAAGAATAAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR TCA 90 bp AGCTCTGGGCTTGTGAGCAGCAGGACCCGGCTCCCAGGACAAGACTaGTACTGCATCAGAGTTCACTCTGCACAAACAAGATCAGAACAC +
Preference number: 1 (lower is better)
Translates to: SSGLVSSRTRLPGQD*YCIRVHSAQTRSEH
Trigger: GTGTTCTGATCTTGTTTGTGCAGAGTGAACTCTGATGCAGTATCAGTCTTGTCCTGGGAGCCGGGTCCTGCTGCTCACAAGCCCAGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR TCA 90 bp ACGGAGCAGAAGCAGCTTCCCACCCAAGCACCTCTGAACTGTGCGTaGGGAGGCACAATTCAGGGTTGTTTCTCGAGAACACTCATTGGA +
Preference number: 1 (lower is better)
Translates to: TEQKQLPTQAPLNCA*GGTIQGCFSRTLIG
Trigger: TCCAATGAGTGTTCTCGAGAAACAACCCTGAATTGTGCCTCCTCACGCACAGTTCAGAGGTGCTTGGGTGGGAAGCTGCTTCTGCTCCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544132.2
3UTR TCA 90 bp AAGGAAACCAAAAGCAAAGTCCCTGTGGTCACCCTTATTTATTGCTaGAGCAGAACGAAAACCTGCTCCACGGGCCGGGCTTCCTGCCCA +
Preference number: 1 (lower is better)
Translates to: KETKSKVPVVTLIYC*SRTKTCSTGRASCP
Trigger: TGGGCAGGAAGCCCGGCCCGTGGAGCAGGTTTTCGTTCTGCTTCAGCAATAAATAAGGGTGACCACAGGGACTTTGCTTTTGGTTTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR TCA 90 bp GAGATGGCACTGAATGAGGCTTTATGGTGGGGTTTCCCACAGACGTaGCCTTCGTTTGCTTCTGTAGGTGCTCCACCCATTCCTGCAGAT +
Preference number: 1 (lower is better)
Translates to: EMALNEALWWGFPQT*PSFASVGAPPIPAD
Trigger: ATCTGCAGGAATGGGTGGAGCACCTACAGAAGCAAACGAAGGTCACGTCTGTGGGAAACCCCACCATAAAGCCTCATTCAGTGCCATCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469877.5
3UTR CCA 90 bp TGTGTCCATGGCTCTTCCAGACAACATAAGTATGGATGTCAGGGGTaGGGAGCCGGGGGAACTGAAGCCACAGCACTTGACTTTGTAAGT +
Preference number: 1 (lower is better)
Translates to: CVHGSSRQHKYGCQG*GAGGTEATALDFVS
Trigger: ACTTACAAAGTCAAGTGCTGTGGCTTCAGTTCCCCCGGCTCCCCACCCCTGACATCCATACTTATGTTGTCTGGAAGAGCCATGGACACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR CCA 90 bp AAGATCAGAACACTGAATACGTGGGTTTGGCGAAGGAGTGGGCAGTaGGGAAGAAAGAAATCACGGCCACCTGGAATTACAGCCACCCTG +
Preference number: 1 (lower is better)
Translates to: KIRTLNTWVWRRSGQ*GRKKSRPPGITATL
Trigger: CAGGGTGGCTGTAATTCCAGGTGGCCGTGATTTCTTTCTTCCCCACTGCCCACTCCTTCGCCAAACCCACGTATTCAGTGTTCTGATCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR TCA 90 bp CACTGCAATTCAGGGAAGTTTGGGGTGAAGATGCGAGTGAACATCTaGGCCATGACAGTAAGCTCTGCCTTTGGAAAGGAGAGCTCCCAC +
Preference number: 1 (lower is better)
Translates to: HCNSGKFGVKMRVNI*AMTVSSAFGKESSH
Trigger: GTGGGAGCTCTCCTTTCCAAAGGCAGAGCTTACTGTCATGGCTCAGATGTTCACTCGCATCTTCACCCCAAACTTCCCTGAATTGCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR GCA 90 bp GACCCGGCTCCCAGGACAAGACTGATACTGCATCAGAGTTCACTCTaGACAAACAAGATCAGAACACTGAATACGTGGGTTTGGCGAAGG +
Preference number: 1 (lower is better)
Translates to: DPAPRTRLILHQSSL*TNKIRTLNTWVWRR
Trigger: CCTTCGCCAAACCCACGTATTCAGTGTTCTGATCTTGTTTGTGCAGAGTGAACTCTGATGCAGTATCAGTCTTGTCCTGGGAGCCGGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR GCA 90 bp ACCTTCGTTTGCTTCTGTAGGTGCTCCACCCATTCCTGCAGATCCTaGTGGTTGTTGCACGACACTAATATCCGCTCAATCATGCTCCCT +
Preference number: 1 (lower is better)
Translates to: TFVCFCRCSTHSCRS*WLLHDTNIRSIMLP
Trigger: AGGGAGCATGATTGAGCGGATATTAGTGTCGTGCAACAACCAGCAGGATCTGCAGGAATGGGTGGAGCACCTACAGAAGCAAACGAAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469877.5
3UTR GCA 90 bp ACAGACGTGACCTTCGTTTGCTTCTGTAGGTGCTCCACCCATTCCTaGAGATCCTGCTGGTTGTTGCACGACACTAATATCCGCTCAATC +
Preference number: 1 (lower is better)
Translates to: TDVTFVCFCRCSTHS*RSCWLLHDTNIRSI
Trigger: GATTGAGCGGATATTAGTGTCGTGCAACAACCAGCAGGATCTGCAGGAATGGGTGGAGCACCTACAGAAGCAAACGAAGGTCACGTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469877.5
3UTR CCA 90 bp CCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTaGAACTGGGCTCACAGCACCTTTGCTGCATATATTCTTCTCATC +
Preference number: 1 (lower is better)
Translates to: PEPTCCSARLPEHSR*NWAHSTFAAYILLI
Trigger: GATGAGAAGAATATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR TCA 90 bp CAACAACTACCCCTTACGAAGAGCACCCTCGGATGTAGGCTCACGTaGACACACCACCTCCCTCCAATAGTCAGTCATTCGAATGTATAC +
Preference number: 1 (lower is better)
Translates to: QQLPLTKSTLGCRLT*THHLPPIVSHSNVY
Trigger: GTATACATTCGAATGACTGACTATTGGAGGGAGGTGGTGTGTTCACGTGAGCCTACATCCGAGGGTGCTCTTCGTAAGGGGTAGTTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR GCA 90 bp AGGGCAAGGAAGAACCGTAAACAGCAACACAACACTCTCCCAAGGTaGCCAGCTCAAAGGCATCAGTACACAAAGGATTCAGGTGCAGTT +
Preference number: 1 (lower is better)
Translates to: RARKNRKQQHNTLPR*PAQRHQYTKDSGAV
Trigger: AACTGCACCTGAATCCTTTGTGTACTGATGCCTTTGAGCTGGGCACCTTGGGAGAGTGTTGTGTTGCTGTTTACGGTTCTTCCTTGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR CCA 90 bp CCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAACTaGGCTCACAGCACCTTTGCTGCATATATTCTTCTCATCTCTCCA +
Preference number: 1 (lower is better)
Translates to: PTCCSARLPEHSRWN*AHSTFAAYILLISP
Trigger: TGGAGAGATGAGAAGAATATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR CCA 90 bp AGTTCACTCTGCACAAACAAGATCAGAACACTGAATACGTGGGTTTaGCGAAGGAGTGGGCAGTGGGGAAGAAAGAAATCACGGCCACCT +
Preference number: 1 (lower is better)
Translates to: SSLCTNKIRTLNTWV*RRSGQWGRKKSRPP
Trigger: AGGTGGCCGTGATTTCTTTCTTCCCCACTGCCCACTCCTTCGCCAAACCCACGTATTCAGTGTTCTGATCTTGTTTGTGCAGAGTGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR CCA 90 bp TTCGTTTGCTTCTGTAGGTGCTCCACCCATTCCTGCAGATCCTGCTaGTTGTTGCACGACACTAATATCCGCTCAATCATGCTCCCTGAT +
Preference number: 1 (lower is better)
Translates to: FVCFCRCSTHSCRSC*LLHDTNIRSIMLPD
Trigger: ATCAGGGAGCATGATTGAGCGGATATTAGTGTCGTGCAACAACCAGCAGGATCTGCAGGAATGGGTGGAGCACCTACAGAAGCAAACGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469877.5
3UTR GCA 90 bp GGCTTCGTCTCCTCTGCACTGGAACACAGTGGGGGAAACGTTCCCTaGTTATGCCTATGTTACTTAGTGGAACCTAAGGTGTATATTGCT +
Preference number: 1 (lower is better)
Translates to: GFVSSALEHSGGNVP*LCLCYLVEPKVYIA
Trigger: AGCAATATACACCTTAGGTTCCACTAAGTAACATAGGCATAAGCAGGGAACGTTTCCCCCACTGTGTTCCAGTGCAGAGGAGACGAAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR GCA 90 bp GCTTCTGTAGGTGCTCCACCCATTCCTGCAGATCCTGCTGGTTGTTaGACGACACTAATATCCGCTCAATCATGCTCCCTGATAGATAAA +
Preference number: 1 (lower is better)
Translates to: ASVGAPPIPADPAGC*TTLISAQSCSLIDK
Trigger: TTTATCTATCAGGGAGCATGATTGAGCGGATATTAGTGTCGTGCAACAACCAGCAGGATCTGCAGGAATGGGTGGAGCACCTACAGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469877.5
3UTR TCA 90 bp CTATACAGAACCGTCTGTGTCCTCCCAAAACGCAGCAAACTCATCTaGGAATCACAGTACTCAGACAGCGGACAAGAGCAAACACCTCTA +
Preference number: 1 (lower is better)
Translates to: LYRTVCVLPKRSKLI*ESQYSDSGQEQTPL
Trigger: TAGAGGTGTTTGCTCTTGTCCGCTGTCTGAGTACTGTGATTCTCAGATGAGTTTGCTGCGTTTTGGGAGGACACAGACGGTTCTGTATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR CCA 90 bp GGCATGGGACTTCTTATTCACGTAGCTGGAAAGGACATTCTAGCATaGGGATTAGCCCGGACAGAACCACCACAGGTATGCATTCAAAAT +
Preference number: 1 (lower is better)
Translates to: GMGLLIHVAGKDILA*GLARTEPPQVCIQN
Trigger: ATTTTGAATGCATACCTGTGGTGGTTCTGTCCGGGCTAATCCCCATGCTAGAATGTCCTTTCCAGCTACGTGAATAAGAAGTCCCATGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR CCA 90 bp TGCGTGAGGAGGCACAATTCAGGGTTGTTTCTCGAGAACACTCATTaGAAAACAATTCACTACTGCACGAAGAGGGCCAAAGATCTGCAG +
Preference number: 1 (lower is better)
Translates to: CVRRHNSGLFLENTH*KTIHYCTKRAKDLQ
Trigger: CTGCAGATCTTTGGCCCTCTTCGTGCAGTAGTGAATTGTTTTCCAATGAGTGTTCTCGAGAAACAACCCTGAATTGTGCCTCCTCACGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544132.2
3UTR TCA 90 bp CATCTACAGGATAAGAAATGGCTTCATCTCCTCATCCATACAAGGTaGGAGCAAAGGAGTAACCCTCGGGCAAATCGTGGCCCCTTTAAA +
Preference number: 1 (lower is better)
Translates to: HLQDKKWLHLLIHTR*EQRSNPRANRGPFK
Trigger: TTTAAAGGGGCCACGATTTGCCCGAGGGTTACTCCTTTGCTCTCACCTTGTATGGATGAGGAGATGAAGCCATTTCTTATCCTGTAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR TCA 90 bp ATGTGGACAAGCACAGACGCCACTGAGTGTGAAGGAACGAGCTTCTaGTGCTACATTCCAACATCGCTGAAAACTGAAAGTGCTTCACAT +
Preference number: 1 (lower is better)
Translates to: MWTSTDATECEGTSF*CYIPTSLKTESASH
Trigger: ATGTGAAGCACTTTCAGTTTTCAGCGATGTTGGAATGTAGCATCAGAAGCTCGTTCCTTCACACTCAGTGGCGTCTGTGCTTGTCCACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR TCA 90 bp AATAGAGCGTGCATGGGACAGAACACAATTTGGCCCCTCAAGCAATaGCTAGGTGTGGATTTGATGCTACAACTGAATGCAACAGGTCAC +
Preference number: 1 (lower is better)
Translates to: NRACMGQNTIWPLKQ*LGVDLMLQLNATGH
Trigger: GTGACCTGTTGCATTCAGTTGTAGCATCAAATCCACACCTAGTCATTGCTTGAGGGGCCAAATTGTGTTCTGTCCCATGCACGCTCTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR TCA 90 bp ATGATACTTGGTATTAAAGGAAAATCCAAGTGCAGCAACTGTGTTTaGGTGTTGTGGTCTACACAGCCCATGACACAGGCAACCCACGCC +
Preference number: 1 (lower is better)
Translates to: MILGIKGKSKCSNCV*VLWSTQPMTQATHA
Trigger: GGCGTGGGTTGCCTGTGTCATGGGCTGTGTAGACCACAACACTCAAACACAGTTGCTGCACTTGGATTTTCCTTTAATACCAAGTATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR TCA 90 bp TGTATGATAATCCTGTGTTCCGTGAGGACATTCACTGCAGAAGGGTaGTTGGCACAATACGTGAGGTACAGGGTTTTCATCTGTGGCATC +
Preference number: 1 (lower is better)
Translates to: CMIILCSVRTFTAEG*LAQYVRYRVFICGI
Trigger: GATGCCACAGATGAAAACCCTGTACCTCACGTATTGTGCCAATCACCCTTCTGCAGTGAATGTCCTCACGGAACACAGGATTATCATACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469877.5
3UTR CCA 90 bp CTCAGGTCCTCAGAGTCAATCCCTCCTGTCTGGATTCATCAGTCATaGTTTGATCGTCTCCATTCGCAGAATAAGCTCCAGCTTTTCTAT +
Preference number: 1 (lower is better)
Translates to: LRSSESIPPVWIHQS*FDRLHSQNKLQLFY
Trigger: ATAGAAAAGCTGGAGCTTATTCTGCGAATGGAGACGATCAAACCATGACTGATGAATCCAGACAGGAGGGATTGACTCTGAGGACCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR GCA 90 bp GTCTCCTCTGCACTGGAACACAGTGGGGGAAACGTTCCCTGCTTATaGCTATGTTACTTAGTGGAACCTAAGGTGTATATTGCTTTATTC +
Preference number: 1 (lower is better)
Translates to: VSSALEHSGGNVPCL*LCYLVEPKVYIALF
Trigger: GAATAAAGCAATATACACCTTAGGTTCCACTAAGTAACATAGGCATAAGCAGGGAACGTTTCCCCCACTGTGTTCCAGTGCAGAGGAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR CCA 90 bp TCACTGAACTTATTGCAGAATGAGGTAACTGAGATGTTCACAGAGTaGATTGATGTAGCTCAGGTCCTCAGAGTCAATCCCTCCTGTCTG +
Preference number: 1 (lower is better)
Translates to: SLNLLQNEVTEMFTE*IDVAQVLRVNPSCL
Trigger: CAGACAGGAGGGATTGACTCTGAGGACCTGAGCTACATCAATCCACTCTGTGAACATCTCAGTTACCTCATTCTGCAATAAGTTCAGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR TCA 90 bp CTGAGTGTGAAGGAACGAGCTTCTGATGCTACATTCCAACATCGCTaGAAACTGAAAGTGCTTCACATCTACAGGATAAGAAATGGCTTC +
Preference number: 1 (lower is better)
Translates to: LSVKERASDATFQHR*KLKVLHIYRIRNGF
Trigger: GAAGCCATTTCTTATCCTGTAGATGTGAAGCACTTTCAGTTTTCAGCGATGTTGGAATGTAGCATCAGAAGCTCGTTCCTTCACACTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR GCA 90 bp AAAATCCCATTTACTATCTGGCTGAACATACATAAACCCCATCTCTaGCGGAGATTAACACTGGGCTCTGACTGCTCCTCAATGTTCTTA +
Preference number: 1 (lower is better)
Translates to: KIPFTIWLNIHKPHL*RRLTLGSDCSSMFL
Trigger: TAAGAACATTGAGGAGCAGTCAGAGCCCAGTGTTAATCTCCGGCAGAGATGGGGTTTATGTATGTTCAGCCAGATAGTAAATGGGATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR TCA 90 bp GTATCAGCCTGCAGCATGGCCTCCATCTGTTTTCATCAGCTGCAGTaGCTTATAATAAATAATACATTCTATTTACAGGTTCTAGTAAGA +
Preference number: 1 (lower is better)
Translates to: VSACSMASICFHQLQ*LIINNTFYLQVLVR
Trigger: TCTTACTAGAACCTGTAAATAGAATGTATTATTTATTATAAGTCACTGCAGCTGATGAAAACAGATGGAGGCCATGCTGCAGGCTGATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR TCA 90 bp TGGCAACCTAGTAATTCTTCAATGAACTTCAATATCCCATTACAATaGGGCATTGTGGTTTTATACTATGGGGTTGCTGTAAATGGAGTT +
Preference number: 1 (lower is better)
Translates to: WQPSNSSMNFNIPLQ*GIVVLYYGVAVNGV
Trigger: AACTCCATTTACAGCAACCCCATAGTATAAAACCACAATGCCTCATTGTAATGGGATATTGAAGTTCATTGAAGAATTACTAGGTTGCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR TCA 90 bp GTGGGAGGGGTGGGGCAGCGTGTGGTAGGCGGGCGTCAGCGGCGCGGGCTTGCTGCTTGCTGGACGGAGTaGCCGGGTGGGAGGGGAGGG +
Preference number: 2 (lower is better)
Translates to: VGGVGQRVVGGRQRRGLAACWTE*PGGRGG
Trigger: CCCTCCCCTCCCACCCGGTCACTCCGTCCAGCAAGC...AGCAAGCCCGCGCCGCTGACGCCCGCCTACCACACGCTGCCCCACCCCTCCCAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000469877.5
3UTR-3UTR CCA 90 bp AACGAAAACCTGCTCCACGGGCCGGGCTTCCTGCCCAGGACCGCACAGGCTTTCGCTGCCACAGCACGGTaGAGGCCCTGGTGCTGCGGA +
Preference number: 2 (lower is better)
Translates to: NENLLHGPGFLPRTAQAFAATAR*RPWCCG
Trigger: TCCGCAGCACCAGGGCCTCCACCGTGCTGTGGCAGC...GAAAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGTGGAGCAGGTTTTCGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR TCA 90 bp AAAACCTGCTCCACGGGCCGGGCTTCCTGCCCAGGACCGCACAGGCTTTCCAGACCTGCCCTGTGGTCCTaGGTGCACCCCGACTTGGGT +
Preference number: 2 (lower is better)
Translates to: KTCSTGRASCPGPHRLSRPALWS*VHPDLG
Trigger: ACCCAAGTCGGGGTGCACTCAGGACCACAGGGCAGG...TCTGGAAAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGTGGAGCAGGTTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR GCA 90 bp GTGGGAGGGGTGGGGCAGCGTGTGGTAGGCGGGCGTCAGCGGCGCGGGCTTGCTGTTTGCTTCTGTAGGTaGTCCACCCATTCCTGCAGA +
Preference number: 2 (lower is better)
Translates to: VGGVGQRVVGGRQRRGLAVCFCR*STHSCR
Trigger: TCTGCAGGAATGGGTGGAGCACCTACAGAAGCAAAC...AGCAAGCCCGCGCCGCTGACGCCCGCCTACCACACGCTGCCCCACCCCTCCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469877.5
3UTR-3UTR CCA 90 bp GTGGGAGGGGTGGGGCAGCGTGTGGTAGGCGGGCGTCAGCGGCGCGGGCTTGCTCTGAATGAGGCTTTATaGTGGGGTTTCCCACAGACG +
Preference number: 2 (lower is better)
Translates to: VGGVGQRVVGGRQRRGLALNEAL*WGFPQT
Trigger: CGTCTGTGGGAAACCCCACCATAAAGCCTCATTCAG...AGCAAGCCCGCGCCGCTGACGCCCGCCTACCACACGCTGCCCCACCCCTCCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000469877.5
3UTR-3UTR GCA 90 bp AACGAAAACCTGCTCCACGGGCCGGGCTTCCTGCCCAGGACCGCACAGGCTTTCTGGAGGCCCTGGTGCTaGGGAACGAACCAGGCATCC +
Preference number: 2 (lower is better)
Translates to: NENLLHGPGFLPRTAQAFWRPWC*GTNQAS
Trigger: GGATGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCA...GAAAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGTGGAGCAGGTTTTCGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR TCA 90 bp GCGTGTGGTAGGCGGGCGTCAGCGGCGCGGGCTTGCTGTCTGCGTGCTTGCTGGTTCACTGCAGAAGGGTaGTTGGCACAATACGTGAGG +
Preference number: 2 (lower is better)
Translates to: ACGRRASAARACCLRACWFTAEG*LAQYVR
Trigger: CCTCACGTATTGTGCCAATCACCCTTCTGCAGTGAA...CCAGCAAGCACGCAGACAGCAAGCCCGCGCCGCTGACGCCCGCCTACCACACGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469877.5
3UTR-3UTR TCA 90 bp GCGTGTGGTAGGCGGGCGTCAGCGGCGCGGGCTTGCTGTCTGCGTGCTTGCTGGGGTTTCCCACAGACGTaGCCTTCGTTTGCTTCTGTA +
Preference number: 2 (lower is better)
Translates to: ACGRRASAARACCLRACWGFPQT*PSFASV
Trigger: TACAGAAGCAAACGAAGGTCACGTCTGTGGGAAACC...CCAGCAAGCACGCAGACAGCAAGCCCGCGCCGCTGACGCCCGCCTACCACACGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469877.5
3UTR-3UTR TCA 90 bp GCGTGTGGTAGGCGGGCGTCAGCGGCGCGGGCTTGCTGTCTGCGTGCTTGCTGGGGTATGAGATGGCACTaGATGAGGCTTTATGGTGGG +
Preference number: 2 (lower is better)
Translates to: ACGRRASAARACCLRACWGMRWH*MRLYGG
Trigger: CCCACCATAAAGCCTCATTCAGTGCCATCTCATACC...CCAGCAAGCACGCAGACAGCAAGCCCGCGCCGCTGACGCCCGCCTACCACACGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469877.5
3UTR-3UTR GCA 90 bp ACGCCCAGCGCATGTGGACAAGCACAGACGCCACTGAGTGTGAAGGAACGAGCTACGGGCCGGGCTTCCTaGCCAGGACCGCACAGGCTT +
Preference number: 2 (lower is better)
Translates to: TPSACGQAQTPLSVKERATGRAS*PGPHRL
Trigger: AAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGT...AGCTCGTTCCTTCACACTCAGTGGCGTCTGTGCTTGTCCACATGCGCTGGGCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR GCA 90 bp GCGTGTGGTAGGCGGGCGTCAGCGGCGCGGGCTTGCTGTCTGCGTGCTTGCTGGCGTGAGGACATTCACTaGAGAAGGGTGATTGGCACA +
Preference number: 2 (lower is better)
Translates to: ACGRRASAARACCLRACWREDIH*RRVIGT
Trigger: TGTGCCAATCACCCTTCTGCAGTGAATGTCCTCACG...CCAGCAAGCACGCAGACAGCAAGCCCGCGCCGCTGACGCCCGCCTACCACACGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469877.5
3UTR-3UTR GCA 90 bp GCGGCAGTGCCGTATGGGCCTTCCTTGAGGTCAAGACTGAGTCTGTCAGCCAGCTGGAGGCCCTGGTGCTaGGGAACGAACCAGGCATCC +
Preference number: 2 (lower is better)
Translates to: AAVPYGPSLRSRLSLSASWRPWC*GTNQAS
Trigger: GGATGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCA...GCTGGCTGACAGACTCAGTCTTGACCTCAAGGAAGGCCCATACGGCACTGCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp GCGGCAGTGCCGTATGGGCCTTCCTTGAGGTCAAGACTGAGTCTGTCAGCCAGCGAGTGCACCCCGACTTaGGTCAGGGGTGCCCAGCTT +
Preference number: 2 (lower is better)
Translates to: AAVPYGPSLRSRLSLSASECTPT*VRGAQL
Trigger: AAGCTGGGCACCCCTGACCCAAGTCGGGGTGCACTC...GCTGGCTGACAGACTCAGTCTTGACCTCAAGGAAGGCCCATACGGCACTGCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp ACGCCCAGCGCATGTGGACAAGCACAGACGCCACTGAGTGTGAAGGAACGAGCTGCACGGTGGAGGCCCTaGTGCTGCGGAACGAACCAG +
Preference number: 2 (lower is better)
Translates to: TPSACGQAQTPLSVKERAARWRP*CCGTNQ
Trigger: CTGGTTCGTTCCGCAGCACCAGGGCCTCCACCGTGC...AGCTCGTTCCTTCACACTCAGTGGCGTCTGTGCTTGTCCACATGCGCTGGGCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp AAAACCTGCTCCACGGGCCGGGCTTCCTGCCCAGGACCGCACAGGCTTTCCAGAAGCACTGAAGCCTGCTaGCTACGGCCAATGGTGGAG +
Preference number: 2 (lower is better)
Translates to: KTCSTGRASCPGPHRLSRSTEAC*LRPMVE
Trigger: CTCCACCATTGGCCGTAGCCAGCAGGCTTCAGTGCT...TCTGGAAAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGTGGAGCAGGTTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp GCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGCACCCAGAACACAGCCGTTaGAACTGGGCTCACAGCACC +
Preference number: 2 (lower is better)
Translates to: AVRWRQALNTRDARPSVHPEHSR*NWAHST
Trigger: GGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCTGG...GTGCACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR TCA 90 bp GCGTGTGGTAGGCGGGCGTCAGCGGCGCGGGCTTGCTGTCTGCGTGCTTGCTGGTTCTTGACATTGGGCTaGAAGGTTTTTGAAGGCAGC +
Preference number: 2 (lower is better)
Translates to: ACGRRASAARACCLRACWFLTLG*KVFEGS
Trigger: GCTGCCTTCAAAAACCTTTCAGCCCAATGTCAAGAA...CCAGCAAGCACGCAGACAGCAAGCCCGCGCCGCTGACGCCCGCCTACCACACGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469877.5
3UTR-3UTR GCA 90 bp ACGCCCAGCGCATGTGGACAAGCACAGACGCCACTGAGTGTGAAGGAACGAGCTTGGAGGCCCTGGTGCTaGGGAACGAACCAGGCATCC +
Preference number: 2 (lower is better)
Translates to: TPSACGQAQTPLSVKERAWRPWC*GTNQAS
Trigger: GGATGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCA...AGCTCGTTCCTTCACACTCAGTGGCGTCTGTGCTTGTCCACATGCGCTGGGCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR GCA 90 bp AAAACCTGCTCCACGGGCCGGGCTTCCTGCCCAGGACCGCACAGGCTTTCCAGATGTCAGCCAGCAAGTTaGCCTCAGAAACCCGCAGGT +
Preference number: 2 (lower is better)
Translates to: KTCSTGRASCPGPHRLSRCQPAS*PQKPAG
Trigger: ACCTGCGGGTTTCTGAGGGCAACTTGCTGGCTGACA...TCTGGAAAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGTGGAGCAGGTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp ACGCCCAGCGCATGTGGACAAGCACAGACGCCACTGAGTGTGAAGGAACGAGCTGCAGGAGATCCGTCCTaGGGACTCGGACAGCAACGC +
Preference number: 2 (lower is better)
Translates to: TPSACGQAQTPLSVKERAAGDPS*GLGQQR
Trigger: GCGTTGCTGTCCGAGTCCCCAGGACGGATCTCCTGC...AGCTCGTTCCTTCACACTCAGTGGCGTCTGTGCTTGTCCACATGCGCTGGGCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR TCA 90 bp ACAGGCTTCGTCTCCTCTGCACTGGAACACAGTGGGGGAAACGTTCCCTGCTTACCTGCCCTGTGGTCCTaGGTGCACCCCGACTTGGGT +
Preference number: 2 (lower is better)
Translates to: TGFVSSALEHSGGNVPCLPALWS*VHPDLG
Trigger: ACCCAAGTCGGGGTGCACTCAGGACCACAGGGCAGG...TAAGCAGGGAACGTTTCCCCCACTGTGTTCCAGTGCAGAGGAGACGAAGCCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR TCA 90 bp TGTGGTAGGCGGGCGTCAGCGGCGCGGGCTTGCTGTCTGCGTGCTTGCTGGACGGATTGGCACAATACGTaGGGTACAGGGTTTTCATCT +
Preference number: 2 (lower is better)
Translates to: CGRRASAARACCLRACWTDWHNT*GTGFSS
Trigger: AGATGAAAACCCTGTACCTCACGTATTGTGCCAATC...CGTCCAGCAAGCACGCAGACAGCAAGCCCGCGCCGCTGACGCCCGCCTACCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469877.5
3UTR-3UTR TCA 90 bp CGTCAGCGGCGCGGGCTTGCTGTCTGCGTGCTTGCTGGACGGAGTGACCGGGTGGGGCTGAAAGGTTTTTaGAGGCAGCCATGGATTTTT +
Preference number: 2 (lower is better)
Translates to: RQRRGLAVCVLAGRSDRVGLKGF*RQPWIF
Trigger: AAAAATCCATGGCTGCCTTCAAAAACCTTTCAGCCC...CACCCGGTCACTCCGTCCAGCAAGCACGCAGACAGCAAGCCCGCGCCGCTGACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469877.5
3UTR-3UTR GCA 90 bp AAAACCTGCTCCACGGGCCGGGCTTCCTGCCCAGGACCGCACAGGCTTTCCAGATCTGCTTCCGGTGGATaGGGGCATGGGACTTCTTAT +
Preference number: 2 (lower is better)
Translates to: KTCSTGRASCPGPHRLSRSASGG*GHGTSY
Trigger: ATAAGAAGTCCCATGCCCGCATCCACCGGAAGCAGA...TCTGGAAAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGTGGAGCAGGTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR GCA 90 bp AAAACCTGCTCCACGGGCCGGGCTTCCTGCCCAGGACCGCACAGGCTTTCCAGACCATCAGTATCAGCCTaGAGCATGGCCTCCATCTGT +
Preference number: 2 (lower is better)
Translates to: KTCSTGRASCPGPHRLSRPSVSA*SMASIC
Trigger: ACAGATGGAGGCCATGCTGCAGGCTGATACTGATGG...TCTGGAAAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGTGGAGCAGGTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp ACGCCCAGCGCATGTGGACAAGCACAGACGCCACTGAGTGTGAAGGAACGAGCTGGCTACGGCCAATGGTaGAGGAGACCTCGGGATGAG +
Preference number: 2 (lower is better)
Translates to: TPSACGQAQTPLSVKERAGYGQW*RRPRDE
Trigger: CTCATCCCGAGGTCTCCTCCACCATTGGCCGTAGCC...AGCTCGTTCCTTCACACTCAGTGGCGTCTGTGCTTGTCCACATGCGCTGGGCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR TCA 90 bp CTGTGGTCACCCTTATTTATTGCTGAAGCAGAACGAAAACCTGCTCCACGGGCCCCCAGCGAGCCGCGGTaGGGACAGGCTTCGTCTCCT +
Preference number: 2 (lower is better)
Translates to: LWSPLFIAEAERKPAPRAPSEPR*GQASSP
Trigger: AGGAGACGAAGCCTGTCCTCACCGCGGCTCGCTGGG...GGCCCGTGGAGCAGGTTTTCGTTCTGCTTCAGCAATAAATAAGGGTGACCACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR GCA 90 bp ACAGGCTTCGTCTCCTCTGCACTGGAACACAGTGGGGGAAACGTTCCCTGCTTACCCTGTGGTCCTGAGTaGACCCCGACTTGGGTCAGG +
Preference number: 2 (lower is better)
Translates to: TGFVSSALEHSGGNVPCLPCGPE*TPTWVR
Trigger: CCTGACCCAAGTCGGGGTGCACTCAGGACCACAGGG...TAAGCAGGGAACGTTTCCCCCACTGTGTTCCAGTGCAGAGGAGACGAAGCCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR GCA 90 bp ACGCCCAGCGCATGTGGACAAGCACAGACGCCACTGAGTGTGAAGGAACGAGCTAGGCTTCGTCTCCTCTaGACTGGAACACAGTGGGGG +
Preference number: 2 (lower is better)
Translates to: TPSACGQAQTPLSVKERARLRLL*TGTQWG
Trigger: CCCCCACTGTGTTCCAGTGCAGAGGAGACGAAGCCT...AGCTCGTTCCTTCACACTCAGTGGCGTCTGTGCTTGTCCACATGCGCTGGGCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR GCA 90 bp AGAACCGTAAACAGCAACACAACACTCTCCCAAGGTGCCCAGCTCAAAGGCATCACGGGCCGGGCTTCCTaGCCAGGACCGCACAGGCTT +
Preference number: 2 (lower is better)
Translates to: RTVNSNTTLSQGAQLKGITGRAS*PGPHRL
Trigger: AAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGT...GATGCCTTTGAGCTGGGCACCTTGGGAGAGTGTTGTGTTGCTGTTTACGGTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp ACGCCCAGCGCATGTGGACAAGCACAGACGCCACTGAGTGTGAAGGAACGAGCTAGCACTGAAGCCTGCTaGCTACGGCCAATGGTGGAG +
Preference number: 2 (lower is better)
Translates to: TPSACGQAQTPLSVKERASTEAC*LRPMVE
Trigger: CTCCACCATTGGCCGTAGCCAGCAGGCTTCAGTGCT...AGCTCGTTCCTTCACACTCAGTGGCGTCTGTGCTTGTCCACATGCGCTGGGCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR TCA 90 bp GCGGGCATGGGACTTCTTATTCACGTAGCTGGAAAGGACATTCTAGCATGGGGACCTGCCCTGTGGTCCTaGGTGCACCCCGACTTGGGT +
Preference number: 2 (lower is better)
Translates to: AGMGLLIHVAGKDILAWGPALWS*VHPDLG
Trigger: ACCCAAGTCGGGGTGCACTCAGGACCACAGGGCAGG...TCCCCATGCTAGAATGTCCTTTCCAGCTACGTGAATAAGAAGTCCCATGCCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR TCA 90 bp ACAGGCTTCGTCTCCTCTGCACTGGAACACAGTGGGGGAAACGTTCCCTGCTTAACTTTCGGTGAGCACTaGAGCCTGCTGGCTACGGCC +
Preference number: 2 (lower is better)
Translates to: TGFVSSALEHSGGNVPCLTFGEH*SLLATA
Trigger: GGCCGTAGCCAGCAGGCTTCAGTGCTCACCGAAAGT...TAAGCAGGGAACGTTTCCCCCACTGTGTTCCAGTGCAGAGGAGACGAAGCCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR GCA 90 bp ACGCCCAGCGCATGTGGACAAGCACAGACGCCACTGAGTGTGAAGGAACGAGCTGAAGCCAAAGGGGCTTaGTGGGCACCAGAGACTGTA +
Preference number: 2 (lower is better)
Translates to: TPSACGQAQTPLSVKERAEAKGA*WAPETV
Trigger: TACAGTCTCTGGTGCCCAGCAAGCCCCTTTGGCTTC...AGCTCGTTCCTTCACACTCAGTGGCGTCTGTGCTTGTCCACATGCGCTGGGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp AACGAAAACCTGCTCCACGGGCCGGGCTTCCTGCCCAGGACCGCACAGGCTTTCAAGGACATTCTAGCATaGGGATTAGCCCGGACAGAA +
Preference number: 2 (lower is better)
Translates to: NENLLHGPGFLPRTAQAFKDILA*GLARTE
Trigger: TTCTGTCCGGGCTAATCCCCATGCTAGAATGTCCTT...GAAAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGTGGAGCAGGTTTTCGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp CTGTGGTCACCCTTATTTATTGCTGAAGCAGAACGAAAACCTGCTCCACGGGCCGCACGGTGGAGGCCCTaGTGCTGCGGAACGAACCAG +
Preference number: 2 (lower is better)
Translates to: LWSPLFIAEAERKPAPRAARWRP*CCGTNQ
Trigger: CTGGTTCGTTCCGCAGCACCAGGGCCTCCACCGTGC...GGCCCGTGGAGCAGGTTTTCGTTCTGCTTCAGCAATAAATAAGGGTGACCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp AAAACCTGCTCCACGGGCCGGGCTTCCTGCCCAGGACCGCACAGGCTTTCCAGAAGAAACCCGCAGGTCTaGGACTGTAATGCTGCTTTA +
Preference number: 2 (lower is better)
Translates to: KTCSTGRASCPGPHRLSRRNPQV*DCNAAL
Trigger: TAAAGCAGCATTACAGTCCCAGACCTGCGGGTTTCT...TCTGGAAAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGTGGAGCAGGTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR GCA 90 bp CTGTGGTCACCCTTATTTATTGCTGAAGCAGAACGAAAACCTGCTCCACGGGCCTGGAGGCCCTGGTGCTaGGGAACGAACCAGGCATCC +
Preference number: 2 (lower is better)
Translates to: LWSPLFIAEAERKPAPRAWRPWC*GTNQAS
Trigger: GGATGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCA...GGCCCGTGGAGCAGGTTTTCGTTCTGCTTCAGCAATAAATAAGGGTGACCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR GCA 90 bp CCTCTACTACAGTCCAGTAGTCTACACTTGCAGAGGCTGAATGCTTCAGCTTTCACGCCCGCCCGTCTGTaGACCTGCCAAGGCCCAGAG +
Preference number: 2 (lower is better)
Translates to: PLLQSSSLHLQRLNASAFTPARL*TCQGPE
Trigger: CTCTGGGCCTTGGCAGGTGCACAGACGGGCGGGCGT...GAAAGCTGAAGCATTCAGCCTCTGCAAGTGTAGACTACTGGACTGTAGTAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR CCA 90 bp GCGGGCATGGGACTTCTTATTCACGTAGCTGGAAAGGACATTCTAGCATGGGGAGAGTGCACCCCGACTTaGGTCAGGGGTGCCCAGCTT +
Preference number: 2 (lower is better)
Translates to: AGMGLLIHVAGKDILAWGECTPT*VRGAQL
Trigger: AAGCTGGGCACCCCTGACCCAAGTCGGGGTGCACTC...TCCCCATGCTAGAATGTCCTTTCCAGCTACGTGAATAAGAAGTCCCATGCCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp AGAACCGTAAACAGCAACACAACACTCTCCCAAGGTGCCCAGCTCAAAGGCATCGAGTGCACCCCGACTTaGGTCAGGGGTGCCCAGCTT +
Preference number: 2 (lower is better)
Translates to: RTVNSNTTLSQGAQLKGIECTPT*VRGAQL
Trigger: AAGCTGGGCACCCCTGACCCAAGTCGGGGTGCACTC...GATGCCTTTGAGCTGGGCACCTTGGGAGAGTGTTGTGTTGCTGTTTACGGTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp ACGCCCAGCGCATGTGGACAAGCACAGACGCCACTGAGTGTGAAGGAACGAGCTTTAGAAATACCGACATaGGGGGTGCTGCCACAGCAC +
Preference number: 2 (lower is better)
Translates to: TPSACGQAQTPLSVKERALEIPT*GVLPQH
Trigger: GTGCTGTGGCAGCACCCCCCATGTCGGTATTTCTAA...AGCTCGTTCCTTCACACTCAGTGGCGTCTGTGCTTGTCCACATGCGCTGGGCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR TCA 90 bp GCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGCACCTCTCCACAACTACTTaGTCAGTGTTCATAGCACTT +
Preference number: 2 (lower is better)
Translates to: AVRWRQALNTRDARPSVHLSTTT*SVFIAL
Trigger: AAGTGCTATGAACACTGATCAAGTAGTTGTGGAGAG...GTGCACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR TCA 90 bp AAACAATGGCCCTCTGGATGCCACATCGCCACTGCCACAGGAGAACTGTCTTTTGGTCTACACAGCCCATaGCACAGGCAACCCACGCCT +
Preference number: 2 (lower is better)
Translates to: KQWPSGCHIATATGELSFGLHSP*HRQPTP
Trigger: AGGCGTGGGTTGCCTGTGTCATGGGCTGTGTAGACC...AAAAGACAGTTCTCCTGTGGCAGTGGCGATGTGGCATCCAGAGGGCCATTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR GCA 90 bp TCCCAGAGAAGTGAAGAAATGATTGGCATTAAGGAGTCCACACAACCAGGGCAGCGGTGGAGGCCCTGGTaGTGCGGAACGAACCAGGCA +
Preference number: 2 (lower is better)
Translates to: SQRSEEMIGIKESTQPGQRWRPW*CGTNQA
Trigger: TGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCACCG...CTGCCCTGGTTGTGTGGACTCCTTAATGCCAATCATTTCTTCACTTCTCTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp CTGGGGACTCGGACAGCAACGCTACCGGCTCCGAGAGGACAGTTAATGTCGCCTAAGGACATTCTAGCATaGGGATTAGCCCGGACAGAA +
Preference number: 2 (lower is better)
Translates to: LGTRTATLPAPRGQLMSPKDILA*GLARTE
Trigger: TTCTGTCCGGGCTAATCCCCATGCTAGAATGTCCTT...AGGCGACATTAACTGTCCTCTCGGAGCCGGTAGCGTTGCTGTCCGAGTCCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp CTGTGGTCACCCTTATTTATTGCTGAAGCAGAACGAAAACCTGCTCCACGGGCCGGCTTCTGCTTCCGGTaGATGCGGGCATGGGACTTC +
Preference number: 2 (lower is better)
Translates to: LWSPLFIAEAERKPAPRAGFCFR*MRAWDF
Trigger: GAAGTCCCATGCCCGCATCCACCGGAAGCAGAAGCC...GGCCCGTGGAGCAGGTTTTCGTTCTGCTTCAGCAATAAATAAGGGTGACCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp AGAGCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGTCTCCTCCATGGTTCTaGCACTTAGATCACAAACCT +
Preference number: 2 (lower is better)
Translates to: RAVRWRQALNTRDARPSVSPPWF*HLDHKP
Trigger: AGGTTTGTGATCTAAGTGCCAGAACCATGGAGGAGA...CACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR CCA 90 bp CTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGCCAGAGTCTCCTCCATaGTTCTGGCACTTAGATCAC +
Preference number: 2 (lower is better)
Translates to: LPRPRAHMLFCTITRTQPPESPP*FWHLDH
Trigger: GTGATCTAAGTGCCAGAACCATGGAGGAGACTCTGG...CGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR TCA 90 bp ACGGTGGAGGCCCTGGTGCTGCGGAACGAACCAGGCATCCACCAGGCTTCTGCTCTTTTAGTCAGTCACTaGACTTATTGCAGAATGAGG +
Preference number: 2 (lower is better)
Translates to: TVEALVLRNEPGIHQASALLVSH*TYCRMR
Trigger: CCTCATTCTGCAATAAGTTCAGTGACTGACTAAAAG...AGCAGAAGCCTGGTGGATGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCACCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR TCA 90 bp CTTTCGGTGAGCACTGAAGCCTGCTGGCTACGGCCAATGGTGGAGGAGACCTCGACTTCTGAATGGGACTaGAGTGTATCTCTGCAGGTA +
Preference number: 2 (lower is better)
Translates to: LSVSTEACWLRPMVEETSTSEWD*SVSLQV
Trigger: TACCTGCAGAGATACACTTCAGTCCCATTCAGAAGT...CGAGGTCTCCTCCACCATTGGCCGTAGCCAGCAGGCTTCAGTGCTCACCGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR TCA 90 bp CGATTACCAGAACACAGCCGTTGGAACTGGGCTCACAGCACCTTTGCTGCATATGGATGTAGGCTCACGTaGACACACCACCTCCCTCCA +
Preference number: 2 (lower is better)
Translates to: RLPEHSRWNWAHSTFAAYGCRLT*THHLPP
Trigger: TGGAGGGAGGTGGTGTGTTCACGTGAGCCTACATCC...ATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR TCA 90 bp CATCTGAGCCATGACAGTAAGCTCTGCCTTTGGAAAGGAGAGCTCCCACTTCACGGATGTAGGCTCACGTaGACACACCACCTCCCTCCA +
Preference number: 2 (lower is better)
Translates to: HLSHDSKLCLWKGELPLHGCRLT*THHLPP
Trigger: TGGAGGGAGGTGGTGTGTTCACGTGAGCCTACATCC...GTGAAGTGGGAGCTCTCCTTTCCAAAGGCAGAGCTTACTGTCATGGCTCAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR TCA 90 bp CCTCTACTACAGTCCAGTAGTCTACACTTGCAGAGGCTGAATGCTTCAGCTTTCAGCTCTGAACACACGTaGCGCCCGCCCGTCTGTGCA +
Preference number: 2 (lower is better)
Translates to: PLLQSSSLHLQRLNASAFSSEHT*RPPVCA
Trigger: TGCACAGACGGGCGGGCGTCACGTGTGTTCAGAGCT...GAAAGCTGAAGCATTCAGCCTCTGCAAGTGTAGACTACTGGACTGTAGTAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR GCA 90 bp AGAACCGTAAACAGCAACACAACACTCTCCCAAGGTGCCCAGCTCAAAGGCATCGACTTGGGTCAGGGGTaGCCAGCTTCACCTCAGAAC +
Preference number: 2 (lower is better)
Translates to: RTVNSNTTLSQGAQLKGIDLGQG*PASPQN
Trigger: GTTCTGAGGTGAAGCTGGGCACCCCTGACCCAAGTC...GATGCCTTTGAGCTGGGCACCTTGGGAGAGTGTTGTGTTGCTGTTTACGGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR GCA 90 bp CAGCACGGTGGAGGCCCTGGTGCTGCGGAACGAACCAGGCATCCACCAGGCTTCGAACCACCACAGGTATaGATTCAAAATGGGATATTT +
Preference number: 2 (lower is better)
Translates to: QHGGGPGAAERTRHPPGFEPPQV*IQNGIF
Trigger: AAATATCCCATTTTGAATGCATACCTGTGGTGGTTC...GAAGCCTGGTGGATGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCACCGTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR GCA 90 bp AGAACCGTAAACAGCAACACAACACTCTCCCAAGGTGCCCAGCTCAAAGGCATCGTGAGCACTGAAGCCTaGTGGCTACGGCCAATGGTG +
Preference number: 2 (lower is better)
Translates to: RTVNSNTTLSQGAQLKGIVSTEA*WLRPMV
Trigger: CACCATTGGCCGTAGCCAGCAGGCTTCAGTGCTCAC...GATGCCTTTGAGCTGGGCACCTTGGGAGAGTGTTGTGTTGCTGTTTACGGTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR GCA 90 bp AACGAAAACCTGCTCCACGGGCCGGGCTTCCTGCCCAGGACCGCACAGGCTTTCAACGTTCCCTGCTTATaGCTATGTTACTTAGTGGAA +
Preference number: 2 (lower is better)
Translates to: NENLLHGPGFLPRTAQAFNVPCL*LCYLVE
Trigger: TTCCACTAAGTAACATAGGCATAAGCAGGGAACGTT...GAAAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGTGGAGCAGGTTTTCGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR GCA 90 bp CAAAGGAGTAACCCTCGGGCAAATCGTGGCCCCTTTAAACGTTTATATCAAGTTACGGGCCGGGCTTCCTaGCCAGGACCGCACAGGCTT +
Preference number: 2 (lower is better)
Translates to: QRSNPRANRGPFKRLYQVTGRAS*PGPHRL
Trigger: AAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGT...AACTTGATATAAACGTTTAAAGGGGCCACGATTTGCCCGAGGGTTACTCCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR GCA 90 bp ACGCCCAGCGCATGTGGACAAGCACAGACGCCACTGAGTGTGAAGGAACGAGCTCAGACGCATTTTTCCTaGTCCCTAAAAAGCCGAGGA +
Preference number: 2 (lower is better)
Translates to: TPSACGQAQTPLSVKERAQTHFS*SLKSRG
Trigger: TCCTCGGCTTTTTAGGGAGCAGGAAAAATGCGTCTG...AGCTCGTTCCTTCACACTCAGTGGCGTCTGTGCTTGTCCACATGCGCTGGGCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp TTTGTTGTTACTGAACTAGCCTATACAGAACCGTCTGTGTCCTCCCAAAACGCAGCTGCCACAGCACGGTaGAGGCCCTGGTGCTGCGGA +
Preference number: 2 (lower is better)
Translates to: FVVTELAYTEPSVSSQNAAATAR*RPWCCG
Trigger: TCCGCAGCACCAGGGCCTCCACCGTGCTGTGGCAGC...TGCGTTTTGGGAGGACACAGACGGTTCTGTATAGGCTAGTTCAGTAACAACAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp AGAACCGTAAACAGCAACACAACACTCTCCCAAGGTGCCCAGCTCAAAGGCATCTGCGGCAGTGCCGTATaGGCCTTCCTTGAGGTCAAG +
Preference number: 2 (lower is better)
Translates to: RTVNSNTTLSQGAQLKGICGSAV*AFLEVK
Trigger: CTTGACCTCAAGGAAGGCCCATACGGCACTGCCGCA...GATGCCTTTGAGCTGGGCACCTTGGGAGAGTGTTGTGTTGCTGTTTACGGTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp CCTCTGCACTGGAACACAGTGGGGGAAACGTTCCCTGCTTATGCCTATGTTACTTGCGGCAGTGCCGTATaGGCCTTCCTTGAGGTCAAG +
Preference number: 2 (lower is better)
Translates to: PLHWNTVGETFPAYAYVTCGSAV*AFLEVK
Trigger: CTTGACCTCAAGGAAGGCCCATACGGCACTGCCGCA...AGTAACATAGGCATAAGCAGGGAACGTTTCCCCCACTGTGTTCCAGTGCAGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR TCA 90 bp ACGCCCAGCGCATGTGGACAAGCACAGACGCCACTGAGTGTGAAGGAACGAGCTTCATCAGTCATGGTTTaGTCGTCTCCATTCGCAGAA +
Preference number: 2 (lower is better)
Translates to: TPSACGQAQTPLSVKERASSVMV*SSPFAE
Trigger: TTCTGCGAATGGAGACGATCAAACCATGACTGATGA...AGCTCGTTCCTTCACACTCAGTGGCGTCTGTGCTTGTCCACATGCGCTGGGCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR TCA 90 bp CTGGGGACTCGGACAGCAACGCTACCGGCTCCGAGAGGACAGTTAATGTCGCCTGACAAGAGTTGTTCCTaGGTTAAAACCTGCTACAAC +
Preference number: 2 (lower is better)
Translates to: LGTRTATLPAPRGQLMSPDKSCS*VKTCYN
Trigger: GTTGTAGCAGGTTTTAACTCAGGAACAACTCTTGTC...AGGCGACATTAACTGTCCTCTCGGAGCCGGTAGCGTTGCTGTCCGAGTCCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR GCA 90 bp CATCTGAGAATCACAGTACTCAGACAGCGGACAAGAGCAAACACCTCTAGGTGGGACTTGGGTCAGGGGTaGCCAGCTTCACCTCAGAAC +
Preference number: 2 (lower is better)
Translates to: HLRITVLRQRTRANTSRWDLGQG*PASPQN
Trigger: GTTCTGAGGTGAAGCTGGGCACCCCTGACCCAAGTC...CCACCTAGAGGTGTTTGCTCTTGTCCGCTGTCTGAGTACTGTGATTCTCAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR GCA 90 bp TTTGTTGTTACTGAACTAGCCTATACAGAACCGTCTGTGTCCTCCCAAAACGCACGGTGGAGGCCCTGGTaGTGCGGAACGAACCAGGCA +
Preference number: 2 (lower is better)
Translates to: FVVTELAYTEPSVSSQNARWRPW*CGTNQA
Trigger: TGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCACCG...TGCGTTTTGGGAGGACACAGACGGTTCTGTATAGGCTAGTTCAGTAACAACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp CCTGCTACAACAGCAAACTCCAATAAACTCAAGTTGAATGGTTTCCCACTGCAAGCTGCCACAGCACGGTaGAGGCCCTGGTGCTGCGGA +
Preference number: 2 (lower is better)
Translates to: PATTANSNKLKLNGFPLQAATAR*RPWCCG
Trigger: TCCGCAGCACCAGGGCCTCCACCGTGCTGTGGCAGC...TTGCAGTGGGAAACCATTCAACTTGAGTTTATTGGAGTTTGCTGTTGTAGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp AGAGCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGCTCCACAAAGTACAATaGGAAATATCAGGAACACTC +
Preference number: 2 (lower is better)
Translates to: RAVRWRQALNTRDARPSVLHKVQ*EISGTL
Trigger: GAGTGTTCCTGATATTTCCCATTGTACTTTGTGGAG...CACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR CCA 90 bp CATCTGAGCCATGACAGTAAGCTCTGCCTTTGGAAAGGAGAGCTCCCACTTCACCACAGCCGTTGGAACTaGGCTCACAGCACCTTTGCT +
Preference number: 2 (lower is better)
Translates to: HLSHDSKLCLWKGELPLHHSRWN*AHSTFA
Trigger: AGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTG...GTGAAGTGGGAGCTCTCCTTTCCAAAGGCAGAGCTTACTGTCATGGCTCAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR CCA 90 bp GTGGGGAAGAAAGAAATCACGGCCACCTGGAATTACAGCCACCCTGAAGAAGGACACAGCCGTTGGAACTaGGCTCACAGCACCTTTGCT +
Preference number: 2 (lower is better)
Translates to: VGKKEITATWNYSHPEEGHSRWN*AHSTFA
Trigger: AGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTG...TCCTTCTTCAGGGTGGCTGTAATTCCAGGTGGCCGTGATTTCTTTCTTCCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR CCA 90 bp AAACAATGGCCCTCTGGATGCCACATCGCCACTGCCACAGGAGAACTGTCTTTTCACAGCCGTTGGAACTaGGCTCACAGCACCTTTGCT +
Preference number: 2 (lower is better)
Translates to: KQWPSGCHIATATGELSFHSRWN*AHSTFA
Trigger: AGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTG...AAAAGACAGTTCTCCTGTGGCAGTGGCGATGTGGCATCCAGAGGGCCATTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR CCA 90 bp AAACAATGGCCCTCTGGATGCCACATCGCCACTGCCACAGGAGAACTGTCTTTTCTGAATACGTGGGTTTaGCGAAGGAGTGGGCAGTGG +
Preference number: 2 (lower is better)
Translates to: KQWPSGCHIATATGELSFLNTWV*RRSGQW
Trigger: CCACTGCCCACTCCTTCGCCAAACCCACGTATTCAG...AAAAGACAGTTCTCCTGTGGCAGTGGCGATGTGGCATCCAGAGGGCCATTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR TCA 90 bp ACGCCCAGCGCATGTGGACAAGCACAGACGCCACTGAGTGTGAAGGAACGAGCTAAATCTGATGCGCAATaGGTTGTTCTGAGACCAGTA +
Preference number: 2 (lower is better)
Translates to: TPSACGQAQTPLSVKERAKSDAQ*VVLRPV
Trigger: TACTGGTCTCAGAACAACTCATTGCGCATCAGATTT...AGCTCGTTCCTTCACACTCAGTGGCGTCTGTGCTTGTCCACATGCGCTGGGCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR TCA 90 bp CTGGGGACTCGGACAGCAACGCTACCGGCTCCGAGAGGACAGTTAATGTCGCCTCCAATAAACTCAAGTTaGATGGTTTCCCACTGCAAT +
Preference number: 2 (lower is better)
Translates to: LGTRTATLPAPRGQLMSPPINSS*MVSHCN
Trigger: ATTGCAGTGGGAAACCATTCAACTTGAGTTTATTGG...AGGCGACATTAACTGTCCTCTCGGAGCCGGTAGCGTTGCTGTCCGAGTCCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR TCA 90 bp CCTCTACTACAGTCCAGTAGTCTACACTTGCAGAGGCTGAATGCTTCAGCTTTCGGATGTAGGCTCACGTaGACACACCACCTCCCTCCA +
Preference number: 2 (lower is better)
Translates to: PLLQSSSLHLQRLNASAFGCRLT*THHLPP
Trigger: TGGAGGGAGGTGGTGTGTTCACGTGAGCCTACATCC...GAAAGCTGAAGCATTCAGCCTCTGCAAGTGTAGACTACTGGACTGTAGTAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR GCA 90 bp TCCCAGAGAAGTGAAGAAATGATTGGCATTAAGGAGTCCACACAACCAGGGCAGGACTTGGGTCAGGGGTaGCCAGCTTCACCTCAGAAC +
Preference number: 2 (lower is better)
Translates to: SQRSEEMIGIKESTQPGQDLGQG*PASPQN
Trigger: GTTCTGAGGTGAAGCTGGGCACCCCTGACCCAAGTC...CTGCCCTGGTTGTGTGGACTCCTTAATGCCAATCATTTCTTCACTTCTCTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR GCA 90 bp AAAGGAAACCAAAAGCAAAGTCCCTGTGGTCACCCTTATTTATTGCTGAAGCAGCGGTGGAGGCCCTGGTaGTGCGGAACGAACCAGGCA +
Preference number: 2 (lower is better)
Translates to: KGNQKQSPCGHPYLLLKQRWRPW*CGTNQA
Trigger: TGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCACCG...CTGCTTCAGCAATAAATAAGGGTGACCACAGGGACTTTGCTTTTGGTTTCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR GCA 90 bp TATCAAGTTCCCACCCCCTTGGGAGGTCACACGGTGAAACAGACACAGTTATATGTGAGCACTGAAGCCTaGTGGCTACGGCCAATGGTG +
Preference number: 2 (lower is better)
Translates to: YQVPTPLGGHTVKQTQLYVSTEA*WLRPMV
Trigger: CACCATTGGCCGTAGCCAGCAGGCTTCAGTGCTCAC...ATATAACTGTGTCTGTTTCACCGTGTGACCTCCCAAGGGGGTGGGAACTTGATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR GCA 90 bp CAAAGGAGTAACCCTCGGGCAAATCGTGGCCCCTTTAAACGTTTATATCAAGTTGGTGAGGCCAGGTTCTaGAGCATGGGGCAGGTCCAC +
Preference number: 2 (lower is better)
Translates to: QRSNPRANRGPFKRLYQVGEARF*SMGQVH
Trigger: GTGGACCTGCCCCATGCTGCAGAACCTGGCCTCACC...AACTTGATATAAACGTTTAAAGGGGCCACGATTTGCCCGAGGGTTACTCCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR GCA 90 bp TCCCAGAGAAGTGAAGAAATGATTGGCATTAAGGAGTCCACACAACCAGGGCAGGCATTAAGGCAGGTCTaGAGGAGATCCGTCCTGGGG +
Preference number: 2 (lower is better)
Translates to: SQRSEEMIGIKESTQPGQALRQV*RRSVLG
Trigger: CCCCAGGACGGATCTCCTGCAGACCTGCCTTAATGC...CTGCCCTGGTTGTGTGGACTCCTTAATGCCAATCATTTCTTCACTTCTCTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR GCA 90 bp GACCTGGGACATGTAAGTGACGTTGCCCAGAGTTTTAATGTCATCGCCCTCCCAGCTTCCGTCAGGATCTaGAGCTCAAGCTCTTTCCTC +
Preference number: 2 (lower is better)
Translates to: DLGHVSDVAQSFNVIALPASVRI*SSSSFL
Trigger: GAGGAAAGAGCTTGAGCTGCAGATCCTGACGGAAGC...TGGGAGGGCGATGACATTAAAACTCTGGGCAACGTCACTTACATGTCCCAGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469877.5
3UTR-3UTR CCA 90 bp CTGGGGACTCGGACAGCAACGCTACCGGCTCCGAGAGGACAGTTAATGTCGCCTTCTTATTCACGTAGCTaGAAAGGACATTCTAGCATG +
Preference number: 2 (lower is better)
Translates to: LGTRTATLPAPRGQLMSPSYSRS*KGHSSM
Trigger: CATGCTAGAATGTCCTTTCCAGCTACGTGAATAAGA...AGGCGACATTAACTGTCCTCTCGGAGCCGGTAGCGTTGCTGTCCGAGTCCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp AGGGGAAGGGCTGTTAAAAACACAAGTATTCTTGTGAAATACTTCGATCTGAGCGCTGCCACAGCACGGTaGAGGCCCTGGTGCTGCGGA +
Preference number: 2 (lower is better)
Translates to: RGRAVKNTSILVKYFDLSAATAR*RPWCCG
Trigger: TCCGCAGCACCAGGGCCTCCACCGTGCTGTGGCAGC...GCTCAGATCGAAGTATTTCACAAGAATACTTGTGTTTTTAACAGCCCTTCCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp ACCTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCTCTCCTCCATGGTTCTaGCACTTAGATCACAAACCT +
Preference number: 2 (lower is better)
Translates to: TCQGPEPTCCSARLPEHSSPPWF*HLDHKP
Trigger: AGGTTTGTGATCTAAGTGCCAGAACCATGGAGGAGA...GCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR CCA 90 bp CCTCTACTACAGTCCAGTAGTCTACACTTGCAGAGGCTGAATGCTTCAGCTTTCCCAGAACACAGCCGTTaGAACTGGGCTCACAGCACC +
Preference number: 2 (lower is better)
Translates to: PLLQSSSLHLQRLNASAFPEHSR*NWAHST
Trigger: GGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCTGG...GAAAGCTGAAGCATTCAGCCTCTGCAAGTGTAGACTACTGGACTGTAGTAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR CCA 90 bp AAAGTAGAAACAATGGCCCTCTGGATGCCACATCGCCACTGCCACAGGAGAACTCACAGAGCCGTGAGGTaGAGACAAGCTCTGAACACA +
Preference number: 2 (lower is better)
Translates to: KVETMALWMPHRHCHRRTHRAVR*RQALNT
Trigger: TGTGTTCAGAGCTTGTCTCCACCTCACGGCTCTGTG...AGTTCTCCTGTGGCAGTGGCGATGTGGCATCCAGAGGGCCATTGTTTCTACTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR CAA 90 bp AGGAAAGGAAACCAAAAGCAAAGTCCCTGTGGTCACCCTTATTTATaGCTGAAGCAGAACGAAAACCTGCTCCACGGGCCGGGCTTCCTG +
Preference number: 2 (lower is better)
Translates to: RKGNQKQSPCGHPYL*LKQNENLLHGPGFL
Trigger: CAGGAAGCCCGGCCCGTGGAGCAGGTTTTCGTTCTGCTTCAGCAATAAATAAGGGTGACCACAGGGACTTTGCTTTTGGTTTCCTTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR CAA 90 bp CCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTaGGAACTGGGCTCACAGCACCTTTGCTGCATATATTCTTCTCAT +
Preference number: 2 (lower is better)
Translates to: PRAHMLFCTITRTQP*ELGSQHLCCIYSSH
Trigger: ATGAGAAGAATATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR CAA 90 bp GAGTTCACTCTGCACAAACAAGATCAGAACACTGAATACGTGGGTTaGGCGAAGGAGTGGGCAGTGGGGAAGAAAGAAATCACGGCCACC +
Preference number: 2 (lower is better)
Translates to: EFTLHKQDQNTEYVG*AKEWAVGKKEITAT
Trigger: GGTGGCCGTGATTTCTTTCTTCCCCACTGCCCACTCCTTCGCCAAACCCACGTATTCAGTGTTCTGATCTTGTTTGTGCAGAGTGAACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR TCA 90 bp CAGAGTTTTAATGTCATCGCCCTCCCAGTTCCGGATGGCTTCCGTCAGGATCTGAGACCTCAGAGTTTCTaGAGGACAACAGCAACAACC +
Preference number: 2 (lower is better)
Translates to: QSFNVIALPVPDGFRQDLRPQSF*RTTATT
Trigger: GGTTGTTGCTGTTGTCCTTCAGAAACTCTGAGGTCT...CAGATCCTGACGGAAGCCATCCGGAACTGGGAGGGCGATGACATTAAAACTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469877.5
3UTR-3UTR GCA 90 bp TCCCAGAGAAGTGAAGAAATGATTGGCATTAAGGAGTCCACACAACCAGGGCAGTGTCAGCCAGCAAGTTaGCCTCAGAAACCCGCAGGT +
Preference number: 2 (lower is better)
Translates to: SQRSEEMIGIKESTQPGQCQPAS*PQKPAG
Trigger: ACCTGCGGGTTTCTGAGGGCAACTTGCTGGCTGACA...CTGCCCTGGTTGTGTGGACTCCTTAATGCCAATCATTTCTTCACTTCTCTGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR GCA 90 bp CAAAGGAGTAACCCTCGGGCAAATCGTGGCCCCTTTAAACGTTTATATCAAGTTAGCAGAACGAAAACCTaGTCCACGGGCCGGGCTTCC +
Preference number: 2 (lower is better)
Translates to: QRSNPRANRGPFKRLYQVSRTKT*STGRAS
Trigger: GGAAGCCCGGCCCGTGGAGCAGGTTTTCGTTCTGCT...AACTTGATATAAACGTTTAAAGGGGCCACGATTTGCCCGAGGGTTACTCCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR GCA 90 bp GCTTGTTCCATGCTGAATGAAGCCACCCAACTTTCTAAACAACGTGCTACTGCCGGCCCAGAGCCCACATaGTGTTCTGCACGATTACCA +
Preference number: 2 (lower is better)
Translates to: ACSMLNEATQLSKQRATAGPEPT*CSARLP
Trigger: TGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCC...GGCAGTAGCACGTTGTTTAGAAAGTTGGGTGGCTTCATTCAGCATGGAACAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR CCA 90 bp AAAGGAAACCAAAAGCAAAGTCCCTGTGGTCACCCTTATTTATTGCTGAAGCAGATACAGAGAGCAAGGTaGCGCCCCACCCAGCCCTGC +
Preference number: 2 (lower is better)
Translates to: KGNQKQSPCGHPYLLLKQIQRAR*RPTQPC
Trigger: GCAGGGCTGGGTGGGGCGCCACCTTGCTCTCTGTAT...CTGCTTCAGCAATAAATAAGGGTGACCACAGGGACTTTGCTTTTGGTTTCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp CATCTGAGAATCACAGTACTCAGACAGCGGACAAGAGCAAACACCTCTAGGTGGTTAGAAATACCGACATaGGGGGTGCTGCCACAGCAC +
Preference number: 2 (lower is better)
Translates to: HLRITVLRQRTRANTSRWLEIPT*GVLPQH
Trigger: GTGCTGTGGCAGCACCCCCCATGTCGGTATTTCTAA...CCACCTAGAGGTGTTTGCTCTTGTCCGCTGTCTGAGTACTGTGATTCTCAGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp TATCAAGTTCCCACCCCCTTGGGAGGTCACACGGTGAAACAGACACAGTTATATGCAAACACCTCTAGGTaGATGCGGCAGTGCCGTATG +
Preference number: 2 (lower is better)
Translates to: YQVPTPLGGHTVKQTQLYANTSR*MRQCRM
Trigger: CATACGGCACTGCCGCATCCACCTAGAGGTGTTTGC...ATATAACTGTGTCTGTTTCACCGTGTGACCTCCCAAGGGGGTGGGAACTTGATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp CAAAGGAGTAACCCTCGGGCAAATCGTGGCCCCTTTAAACGTTTATATCAAGTTGCTGGCTACGGCCAATaGTGGAGGAGACCTCGGGAT +
Preference number: 2 (lower is better)
Translates to: QRSNPRANRGPFKRLYQVAGYGQ*WRRPRD
Trigger: ATCCCGAGGTCTCCTCCACCATTGGCCGTAGCCAGC...AACTTGATATAAACGTTTAAAGGGGCCACGATTTGCCCGAGGGTTACTCCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR CAA 90 bp GTTTGCTTCTGTAGGTGCTCCACCCATTCCTGCAGATCCTGCTGGTaGTTGCACGACACTAATATCCGCTCAATCATGCTCCCTGATAGA +
Preference number: 2 (lower is better)
Translates to: VCFCRCSTHSCRSCW*LHDTNIRSIMLPDR
Trigger: TCTATCAGGGAGCATGATTGAGCGGATATTAGTGTCGTGCAACAACCAGCAGGATCTGCAGGAATGGGTGGAGCACCTACAGAAGCAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469877.5
3UTR-3UTR TCA 90 bp AAAACAGTGTATTTTGTTGTTACTGAACTAGCCTATACAGAACCGTCTGTGTCCCCTGCCCTGTGGTCCTaGGTGCACCCCGACTTGGGT +
Preference number: 2 (lower is better)
Translates to: KTVYFVVTELAYTEPSVSPALWS*VHPDLG
Trigger: ACCCAAGTCGGGGTGCACTCAGGACCACAGGGCAGG...GGACACAGACGGTTCTGTATAGGCTAGTTCAGTAACAACAAAATACACTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR TCA 90 bp ATCTACAGGATAAGAAATGGCTTCATCTCCTCATCCATACAAGGTGAGAGCAAAGGCAATGCCGTAACATaGGGCCCTCATGGCCGCACC +
Preference number: 2 (lower is better)
Translates to: IYRIRNGFISSSIQGESKGNAVT*GPHGRT
Trigger: GGTGCGGCCATGAGGGCCTCATGTTACGGCATTGCC...TTTGCTCTCACCTTGTATGGATGAGGAGATGAAGCCATTTCTTATCCTGTAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR TCA 90 bp GGATTTGATGCTACAACTGAATGCAACAGGTCACATTCAGTGCTTTTTGAAGCAGGTGGAGACAAGCTCTaGACACACGTGACGCCCGCC +
Preference number: 2 (lower is better)
Translates to: GFDATTECNRSHSVLFEAGGDKL*THVTPA
Trigger: GGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACC...TGCTTCAAAAAGCACTGAATGTGACCTGTTGCATTCAGTTGTAGCATCAAATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR TCA 90 bp AAAGTAGAAACAATGGCCCTCTGGATGCCACATCGCCACTGCCACAGGAGAACTATGCGAGTGAACATCTaGGCCATGACAGTAAGCTCT +
Preference number: 2 (lower is better)
Translates to: KVETMALWMPHRHCHRRTMRVNI*AMTVSS
Trigger: AGAGCTTACTGTCATGGCTCAGATGTTCACTCGCAT...AGTTCTCCTGTGGCAGTGGCGATGTGGCATCCAGAGGGCCATTGTTTCTACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR GCA 90 bp CAAAGGAGTAACCCTCGGGCAAATCGTGGCCCCTTTAAACGTTTATATCAAGTTGACTTGGGTCAGGGGTaGCCAGCTTCACCTCAGAAC +
Preference number: 2 (lower is better)
Translates to: QRSNPRANRGPFKRLYQVDLGQG*PASPQN
Trigger: GTTCTGAGGTGAAGCTGGGCACCCCTGACCCAAGTC...AACTTGATATAAACGTTTAAAGGGGCCACGATTTGCCCGAGGGTTACTCCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR GCA 90 bp CAAAGGAGTAACCCTCGGGCAAATCGTGGCCCCTTTAAACGTTTATATCAAGTTGCATTAAGGCAGGTCTaGAGGAGATCCGTCCTGGGG +
Preference number: 2 (lower is better)
Translates to: QRSNPRANRGPFKRLYQVALRQV*RRSVLG
Trigger: CCCCAGGACGGATCTCCTGCAGACCTGCCTTAATGC...AACTTGATATAAACGTTTAAAGGGGCCACGATTTGCCCGAGGGTTACTCCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp AGGGGAAGGGCTGTTAAAAACACAAGTATTCTTGTGAAATACTTCGATCTGAGCGAGTGCACCCCGACTTaGGTCAGGGGTGCCCAGCTT +
Preference number: 2 (lower is better)
Translates to: RGRAVKNTSILVKYFDLSECTPT*VRGAQL
Trigger: AAGCTGGGCACCCCTGACCCAAGTCGGGGTGCACTC...GCTCAGATCGAAGTATTTCACAAGAATACTTGTGTTTTTAACAGCCCTTCCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp ACAGGCTTCGTCTCCTCTGCACTGGAACACAGTGGGGGAAACGTTCCCTGCTTATCAATCCCTCCTGTCTaGATTCATCAGTCATGGTTT +
Preference number: 2 (lower is better)
Translates to: TGFVSSALEHSGGNVPCLSIPPV*IHQSWF
Trigger: AAACCATGACTGATGAATCCAGACAGGAGGGATTGA...TAAGCAGGGAACGTTTCCCCCACTGTGTTCCAGTGCAGAGGAGACGAAGCCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp GTGTATTTTGTTGTTACTGAACTAGCCTATACAGAACCGTCTGTGTCCTCCCAAGGCTTCTGCTTCCGGTaGATGCGGGCATGGGACTTC +
Preference number: 2 (lower is better)
Translates to: VYFVVTELAYTEPSVSSQGFCFR*MRAWDF
Trigger: GAAGTCCCATGCCCGCATCCACCGGAAGCAGAAGCC...TTGGGAGGACACAGACGGTTCTGTATAGGCTAGTTCAGTAACAACAAAATACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp AGAACCGTAAACAGCAACACAACACTCTCCCAAGGTGCCCAGCTCAAAGGCATCAGAAACCCGCAGGTCTaGGACTGTAATGCTGCTTTA +
Preference number: 2 (lower is better)
Translates to: RTVNSNTTLSQGAQLKGIRNPQV*DCNAAL
Trigger: TAAAGCAGCATTACAGTCCCAGACCTGCGGGTTTCT...GATGCCTTTGAGCTGGGCACCTTGGGAGAGTGTTGTGTTGCTGTTTACGGTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp CTGTGGTCACCCTTATTTATTGCTGAAGCAGAACGAAAACCTGCTCCACGGGCCTATCAGCCTGCAGCATaGCCTCCATCTGTTTTCATC +
Preference number: 2 (lower is better)
Translates to: LWSPLFIAEAERKPAPRAYQPAA*PPSVFI
Trigger: GATGAAAACAGATGGAGGCCATGCTGCAGGCTGATA...GGCCCGTGGAGCAGGTTTTCGTTCTGCTTCAGCAATAAATAAGGGTGACCACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp AAAGGAAACCAAAAGCAAAGTCCCTGTGGTCACCCTTATTTATTGCTGAAGCAGGCTGGCTACGGCCAATaGTGGAGGAGACCTCGGGAT +
Preference number: 2 (lower is better)
Translates to: KGNQKQSPCGHPYLLLKQAGYGQ*WRRPRD
Trigger: ATCCCGAGGTCTCCTCCACCATTGGCCGTAGCCAGC...CTGCTTCAGCAATAAATAAGGGTGACCACAGGGACTTTGCTTTTGGTTTCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp ATCTACAGGATAAGAAATGGCTTCATCTCCTCATCCATACAAGGTGAGAGCAAAGCAGGAGATCCGTCCTaGGGACTCGGACAGCAACGC +
Preference number: 2 (lower is better)
Translates to: IYRIRNGFISSSIQGESKAGDPS*GLGQQR
Trigger: GCGTTGCTGTCCGAGTCCCCAGGACGGATCTCCTGC...TTTGCTCTCACCTTGTATGGATGAGGAGATGAAGCCATTTCTTATCCTGTAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp AAACAATGGCCCTCTGGATGCCACATCGCCACTGCCACAGGAGAACTGTCTTTTAGTAAGCTCTGCCTTTaGAAAGGAGAGCTCCCACTT +
Preference number: 2 (lower is better)
Translates to: KQWPSGCHIATATGELSFSKLCL*KGELPL
Trigger: AAGTGGGAGCTCTCCTTTCCAAAGGCAGAGCTTACT...AAAAGACAGTTCTCCTGTGGCAGTGGCGATGTGGCATCCAGAGGGCCATTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR CCA 90 bp CCATTAGCTTGTTCCATGCTGAATGAAGCCACCCAACTTTCTAAACAACGTGCTTATGGATGTCAGGGGTaGGGAGCCGGGGGAACTGAA +
Preference number: 2 (lower is better)
Translates to: PLACSMLNEATQLSKQRAYGCQG*GAGGTE
Trigger: TTCAGTTCCCCCGGCTCCCCACCCCTGACATCCATA...AGCACGTTGTTTAGAAAGTTGGGTGGCTTCATTCAGCATGGAACAAGCTAATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR CCA 90 bp GCTTGTTCCATGCTGAATGAAGCCACCCAACTTTCTAAACAACGTGCTACTGCCGGTTTGGCGAAGGAGTaGGCAGTGGGGAAGAAAGAA +
Preference number: 2 (lower is better)
Translates to: ACSMLNEATQLSKQRATAGLAKE*AVGKKE
Trigger: TTCTTTCTTCCCCACTGCCCACTCCTTCGCCAAACC...GGCAGTAGCACGTTGTTTAGAAAGTTGGGTGGCTTCATTCAGCATGGAACAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR CAA 90 bp CACCCAAGCACCTCTGAACTGTGCGTGAGGAGGCACAATTCAGGGTaGTTTCTCGAGAACACTCATTGGAAAACAATTCACTACTGCACG +
Preference number: 2 (lower is better)
Translates to: HPSTSELCVRRHNSG*FLENTHWKTIHYCT
Trigger: CGTGCAGTAGTGAATTGTTTTCCAATGAGTGTTCTCGAGAAACAACCCTGAATTGTGCCTCCTCACGCACAGTTCAGAGGTGCTTGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544132.2
3UTR-3UTR TCA 90 bp AAACAATGGCCCTCTGGATGCCACATCGCCACTGCCACAGGAGAACTGTCTTTTAAGCAGAAATTGGTCTaGGTGAGGCCAGTGAAAACT +
Preference number: 2 (lower is better)
Translates to: KQWPSGCHIATATGELSFKQKLV*VRPVKT
Trigger: AGTTTTCACTGGCCTCACTCAGACCAATTTCTGCTT...AAAAGACAGTTCTCCTGTGGCAGTGGCGATGTGGCATCCAGAGGGCCATTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR TCA 90 bp AAACAATGGCCCTCTGGATGCCACATCGCCACTGCCACAGGAGAACTGTCTTTTATTAACACTGGGCTCTaGCTGCTCCTCAATGTTCTT +
Preference number: 2 (lower is better)
Translates to: KQWPSGCHIATATGELSFINTGL*LLLNVL
Trigger: AAGAACATTGAGGAGCAGTCAGAGCCCAGTGTTAAT...AAAAGACAGTTCTCCTGTGGCAGTGGCGATGTGGCATCCAGAGGGCCATTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR CCA 90 bp CATCTGAGAATCACAGTACTCAGACAGCGGACAAGAGCAAACACCTCTAGGTGGAAGGACATTCTAGCATaGGGATTAGCCCGGACAGAA +
Preference number: 2 (lower is better)
Translates to: HLRITVLRQRTRANTSRWKDILA*GLARTE
Trigger: TTCTGTCCGGGCTAATCCCCATGCTAGAATGTCCTT...CCACCTAGAGGTGTTTGCTCTTGTCCGCTGTCTGAGTACTGTGATTCTCAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp AAAGGAAACCAAAAGCAAAGTCCCTGTGGTCACCCTTATTTATTGCTGAAGCAGTGCGGCAGTGCCGTATaGGCCTTCCTTGAGGTCAAG +
Preference number: 2 (lower is better)
Translates to: KGNQKQSPCGHPYLLLKQCGSAV*AFLEVK
Trigger: CTTGACCTCAAGGAAGGCCCATACGGCACTGCCGCA...CTGCTTCAGCAATAAATAAGGGTGACCACAGGGACTTTGCTTTTGGTTTCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp ATCTACAGGATAAGAAATGGCTTCATCTCCTCATCCATACAAGGTGAGAGCAAAGGCTACGGCCAATGGTaGAGGAGACCTCGGGATGAG +
Preference number: 2 (lower is better)
Translates to: IYRIRNGFISSSIQGESKGYGQW*RRPRDE
Trigger: CTCATCCCGAGGTCTCCTCCACCATTGGCCGTAGCC...TTTGCTCTCACCTTGTATGGATGAGGAGATGAAGCCATTTCTTATCCTGTAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp CAAAGGAGTAACCCTCGGGCAAATCGTGGCCCCTTTAAACGTTTATATCAAGTTTCGTCTCCTCTGCACTaGAACACAGTGGGGGAAACG +
Preference number: 2 (lower is better)
Translates to: QRSNPRANRGPFKRLYQVSSPLH*NTVGET
Trigger: CGTTTCCCCCACTGTGTTCCAGTGCAGAGGAGACGA...AACTTGATATAAACGTTTAAAGGGGCCACGATTTGCCCGAGGGTTACTCCTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp CCATTAGCTTGTTCCATGCTGAATGAAGCCACCCAACTTTCTAAACAACGTGCTCTGAATACGTGGGTTTaGCGAAGGAGTGGGCAGTGG +
Preference number: 2 (lower is better)
Translates to: PLACSMLNEATQLSKQRALNTWV*RRSGQW
Trigger: CCACTGCCCACTCCTTCGCCAAACCCACGTATTCAG...AGCACGTTGTTTAGAAAGTTGGGTGGCTTCATTCAGCATGGAACAAGCTAATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR CAA 90 bp GTGCGTGAGGAGGCACAATTCAGGGTTGTTTCTCGAGAACACTCATaGGAAAACAATTCACTACTGCACGAAGAGGGCCAAAGATCTGCA +
Preference number: 2 (lower is better)
Translates to: VREEAQFRVVSREHS*ENNSLLHEEGQRSA
Trigger: TGCAGATCTTTGGCCCTCTTCGTGCAGTAGTGAATTGTTTTCCAATGAGTGTTCTCGAGAAACAACCCTGAATTGTGCCTCCTCACGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544132.2
3UTR-3UTR TCA 90 bp TCCCAGAGAAGTGAAGAAATGATTGGCATTAAGGAGTCCACACAACCAGGGCAGCGCAGCAAACTCATCTaGGAATCACAGTACTCAGAC +
Preference number: 2 (lower is better)
Translates to: SQRSEEMIGIKESTQPGQRSKLI*ESQYSD
Trigger: GTCTGAGTACTGTGATTCTCAGATGAGTTTGCTGCG...CTGCCCTGGTTGTGTGGACTCCTTAATGCCAATCATTTCTTCACTTCTCTGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR TCA 90 bp AGAACCGTAAACAGCAACACAACACTCTCCCAAGGTGCCCAGCTCAAAGGCATCACCCTTATTTATTGCTaGAGCAGAACGAAAACCTGC +
Preference number: 2 (lower is better)
Translates to: RTVNSNTTLSQGAQLKGITLIYC*SRTKTC
Trigger: GCAGGTTTTCGTTCTGCTTCAGCAATAAATAAGGGT...GATGCCTTTGAGCTGGGCACCTTGGGAGAGTGTTGTGTTGCTGTTTACGGTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR TCA 90 bp GTGGGGAAGAAAGAAATCACGGCCACCTGGAATTACAGCCACCCTGAAGAAGGACTCTCCACAACTACTTaGTCAGTGTTCATAGCACTT +
Preference number: 2 (lower is better)
Translates to: VGKKEITATWNYSHPEEGLSTTT*SVFIAL
Trigger: AAGTGCTATGAACACTGATCAAGTAGTTGTGGAGAG...TCCTTCTTCAGGGTGGCTGTAATTCCAGGTGGCCGTGATTTCTTTCTTCCCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR GCA 90 bp TCCACCAGGCTTCTGCTTCCGGTGGATGCGGGCATGGGACTTCTTATTCACGTAGAACCACCACAGGTATaGATTCAAAATGGGATATTT +
Preference number: 2 (lower is better)
Translates to: STRLLLPVDAGMGLLIHVEPPQV*IQNGIF
Trigger: AAATATCCCATTTTGAATGCATACCTGTGGTGGTTC...TACGTGAATAAGAAGTCCCATGCCCGCATCCACCGGAAGCAGAAGCCTGGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR GCA 90 bp GCTTGTTCCATGCTGAATGAAGCCACCCAACTTTCTAAACAACGTGCTACTGCCCTTGCAGAGGCTGAATaGTTCAGCTTTCGGGCTTTA +
Preference number: 2 (lower is better)
Translates to: ACSMLNEATQLSKQRATALAEAE*FSFRAL
Trigger: TAAAGCCCGAAAGCTGAAGCATTCAGCCTCTGCAAG...GGCAGTAGCACGTTGTTTAGAAAGTTGGGTGGCTTCATTCAGCATGGAACAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR GCA 90 bp AAAGTAGAAACAATGGCCCTCTGGATGCCACATCGCCACTGCCACAGGAGAACTGATGCTACAACTGAATaGAACAGGTCACATTCAGTG +
Preference number: 2 (lower is better)
Translates to: KVETMALWMPHRHCHRRTDATTE*NRSHSV
Trigger: CACTGAATGTGACCTGTTGCATTCAGTTGTAGCATC...AGTTCTCCTGTGGCAGTGGCGATGTGGCATCCAGAGGGCCATTGTTTCTACTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR CCA 90 bp CCTCTGCACTGGAACACAGTGGGGGAAACGTTCCCTGCTTATGCCTATGTTACTTGGATTCATCAGTCATaGTTTGATCGTCTCCATTCG +
Preference number: 2 (lower is better)
Translates to: PLHWNTVGETFPAYAYVTWIHQS*FDRLHS
Trigger: CGAATGGAGACGATCAAACCATGACTGATGAATCCA...AGTAACATAGGCATAAGCAGGGAACGTTTCCCCCACTGTGTTCCAGTGCAGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp GCGGGCATGGGACTTCTTATTCACGTAGCTGGAAAGGACATTCTAGCATGGGGATCAATCCCTCCTGTCTaGATTCATCAGTCATGGTTT +
Preference number: 2 (lower is better)
Translates to: AGMGLLIHVAGKDILAWGSIPPV*IHQSWF
Trigger: AAACCATGACTGATGAATCCAGACAGGAGGGATTGA...TCCCCATGCTAGAATGTCCTTTCCAGCTACGTGAATAAGAAGTCCCATGCCCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp AGAACCGTAAACAGCAACACAACACTCTCCCAAGGTGCCCAGCTCAAAGGCATCTCAATCCCTCCTGTCTaGATTCATCAGTCATGGTTT +
Preference number: 2 (lower is better)
Translates to: RTVNSNTTLSQGAQLKGISIPPV*IHQSWF
Trigger: AAACCATGACTGATGAATCCAGACAGGAGGGATTGA...GATGCCTTTGAGCTGGGCACCTTGGGAGAGTGTTGTGTTGCTGTTTACGGTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp TCCCAGAGAAGTGAAGAAATGATTGGCATTAAGGAGTCCACACAACCAGGGCAGAAGGACATTCTAGCATaGGGATTAGCCCGGACAGAA +
Preference number: 2 (lower is better)
Translates to: SQRSEEMIGIKESTQPGQKDILA*GLARTE
Trigger: TTCTGTCCGGGCTAATCCCCATGCTAGAATGTCCTT...CTGCCCTGGTTGTGTGGACTCCTTAATGCCAATCATTTCTTCACTTCTCTGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp TTTGTTGTTACTGAACTAGCCTATACAGAACCGTCTGTGTCCTCCCAAAACGCATTAGAAATACCGACATaGGGGGTGCTGCCACAGCAC +
Preference number: 2 (lower is better)
Translates to: FVVTELAYTEPSVSSQNALEIPT*GVLPQH
Trigger: GTGCTGTGGCAGCACCCCCCATGTCGGTATTTCTAA...TGCGTTTTGGGAGGACACAGACGGTTCTGTATAGGCTAGTTCAGTAACAACAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp GTGTATTTTGTTGTTACTGAACTAGCCTATACAGAACCGTCTGTGTCCTCCCAAGCAAACACCTCTAGGTaGATGCGGCAGTGCCGTATG +
Preference number: 2 (lower is better)
Translates to: VYFVVTELAYTEPSVSSQANTSR*MRQCRM
Trigger: CATACGGCACTGCCGCATCCACCTAGAGGTGTTTGC...TTGGGAGGACACAGACGGTTCTGTATAGGCTAGTTCAGTAACAACAAAATACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp ACGGTGAAACAGACACAGTTATATACAACAGGGCAGGTTTTTAAAAAGAGTTGCGCTGGCTACGGCCAATaGTGGAGGAGACCTCGGGAT +
Preference number: 2 (lower is better)
Translates to: TVKQTQLYTTGQVFKKSCAGYGQ*WRRPRD
Trigger: ATCCCGAGGTCTCCTCCACCATTGGCCGTAGCCAGC...GCAACTCTTTTTAAAAACCTGCCCTGTTGTATATAACTGTGTCTGTTTCACCGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp ATCTACAGGATAAGAAATGGCTTCATCTCCTCATCCATACAAGGTGAGAGCAAAAGCACTGAAGCCTGCTaGCTACGGCCAATGGTGGAG +
Preference number: 2 (lower is better)
Translates to: IYRIRNGFISSSIQGESKSTEAC*LRPMVE
Trigger: CTCCACCATTGGCCGTAGCCAGCAGGCTTCAGTGCT...TTTGCTCTCACCTTGTATGGATGAGGAGATGAAGCCATTTCTTATCCTGTAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp GCTTGTTCCATGCTGAATGAAGCCACCCAACTTTCTAAACAACGTGCTACTGCCAGTAAGCTCTGCCTTTaGAAAGGAGAGCTCCCACTT +
Preference number: 2 (lower is better)
Translates to: ACSMLNEATQLSKQRATASKLCL*KGELPL
Trigger: AAGTGGGAGCTCTCCTTTCCAAAGGCAGAGCTTACT...GGCAGTAGCACGTTGTTTAGAAAGTTGGGTGGCTTCATTCAGCATGGAACAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR CCA 90 bp CCTCTACTACAGTCCAGTAGTCTACACTTGCAGAGGCTGAATGCTTCAGCTTTCAGTAAGCTCTGCCTTTaGAAAGGAGAGCTCCCACTT +
Preference number: 2 (lower is better)
Translates to: PLLQSSSLHLQRLNASAFSKLCL*KGELPL
Trigger: AAGTGGGAGCTCTCCTTTCCAAAGGCAGAGCTTACT...GAAAGCTGAAGCATTCAGCCTCTGCAAGTGTAGACTACTGGACTGTAGTAGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR CCA 90 bp CCATTAGCTTGTTCCATGCTGAATGAAGCCACCCAACTTTCTAAACAACGTGCTGGTTTGGCGAAGGAGTaGGCAGTGGGGAAGAAAGAA +
Preference number: 2 (lower is better)
Translates to: PLACSMLNEATQLSKQRAGLAKE*AVGKKE
Trigger: TTCTTTCTTCCCCACTGCCCACTCCTTCGCCAAACC...AGCACGTTGTTTAGAAAGTTGGGTGGCTTCATTCAGCATGGAACAAGCTAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR CAA 90 bp CACGATTACCAGAACACAGCCGTTGGAACTGGGCTCACAGCACCTTaGCTGCATATATTCTTCTCATCTCTCCACAACTACTTGATCAGT +
Preference number: 2 (lower is better)
Translates to: HDYQNTAVGTGLTAP*LHIFFSSLHNYLIS
Trigger: ACTGATCAAGTAGTTGTGGAGAGATGAGAAGAATATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR TCA 90 bp CAAAGGAGTAACCCTCGGGCAAATCGTGGCCCCTTTAAACGTTTATATCAAGTTGTTCACAGAGTGGATTaGTGTAGCTCAGGTCCTCAG +
Preference number: 2 (lower is better)
Translates to: QRSNPRANRGPFKRLYQVVHRVD*CSSGPQ
Trigger: CTGAGGACCTGAGCTACATCAATCCACTCTGTGAAC...AACTTGATATAAACGTTTAAAGGGGCCACGATTTGCCCGAGGGTTACTCCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR TCA 90 bp TCCCAGAGAAGTGAAGAAATGATTGGCATTAAGGAGTCCACACAACCAGGGCAGACTTCTGAATGGGACTaGAGTGTATCTCTGCAGGTA +
Preference number: 2 (lower is better)
Translates to: SQRSEEMIGIKESTQPGQTSEWD*SVSLQV
Trigger: TACCTGCAGAGATACACTTCAGTCCCATTCAGAAGT...CTGCCCTGGTTGTGTGGACTCCTTAATGCCAATCATTTCTTCACTTCTCTGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR GCA 90 bp CTGTGGTCACCCTTATTTATTGCTGAAGCAGAACGAAAACCTGCTCCACGGGCCAACGTTCCCTGCTTATaGCTATGTTACTTAGTGGAA +
Preference number: 2 (lower is better)
Translates to: LWSPLFIAEAERKPAPRANVPCL*LCYLVE
Trigger: TTCCACTAAGTAACATAGGCATAAGCAGGGAACGTT...GGCCCGTGGAGCAGGTTTTCGTTCTGCTTCAGCAATAAATAAGGGTGACCACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR GCA 90 bp GTGGGGAAGAAAGAAATCACGGCCACCTGGAATTACAGCCACCCTGAAGAAGGATCACAGCACCTTTGCTaGATATATTCTTCTCATCTC +
Preference number: 2 (lower is better)
Translates to: VGKKEITATWNYSHPEEGSQHLC*IYSSHL
Trigger: GAGATGAGAAGAATATATGCAGCAAAGGTGCTGTGA...TCCTTCTTCAGGGTGGCTGTAATTCCAGGTGGCCGTGATTTCTTTCTTCCCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR CCA 90 bp TATCAAGTTCCCACCCCCTTGGGAGGTCACACGGTGAAACAGACACAGTTATATGAGATGTTCACAGAGTaGATTGATGTAGCTCAGGTC +
Preference number: 2 (lower is better)
Translates to: YQVPTPLGGHTVKQTQLYEMFTE*IDVAQV
Trigger: GACCTGAGCTACATCAATCCACTCTGTGAACATCTC...ATATAACTGTGTCTGTTTCACCGTGTGACCTCCCAAGGGGGTGGGAACTTGATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp TCCCAGAGAAGTGAAGAAATGATTGGCATTAAGGAGTCCACACAACCAGGGCAGGAGATGTTCACAGAGTaGATTGATGTAGCTCAGGTC +
Preference number: 2 (lower is better)
Translates to: SQRSEEMIGIKESTQPGQEMFTE*IDVAQV
Trigger: GACCTGAGCTACATCAATCCACTCTGTGAACATCTC...CTGCCCTGGTTGTGTGGACTCCTTAATGCCAATCATTTCTTCACTTCTCTGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp CCTCTGCACTGGAACACAGTGGGGGAAACGTTCCCTGCTTATGCCTATGTTACTTCTTATTCACGTAGCTaGAAAGGACATTCTAGCATG +
Preference number: 2 (lower is better)
Translates to: PLHWNTVGETFPAYAYVTSYSRS*KGHSSM
Trigger: CATGCTAGAATGTCCTTTCCAGCTACGTGAATAAGA...AGTAACATAGGCATAAGCAGGGAACGTTTCCCCCACTGTGTTCCAGTGCAGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp AGGGGAAGGGCTGTTAAAAACACAAGTATTCTTGTGAAATACTTCGATCTGAGCGCAAACACCTCTAGGTaGATGCGGCAGTGCCGTATG +
Preference number: 2 (lower is better)
Translates to: RGRAVKNTSILVKYFDLSANTSR*MRQCRM
Trigger: CATACGGCACTGCCGCATCCACCTAGAGGTGTTTGC...GCTCAGATCGAAGTATTTCACAAGAATACTTGTGTTTTTAACAGCCCTTCCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp CATCTGAGCCATGACAGTAAGCTCTGCCTTTGGAAAGGAGAGCTCCCACTTCACCTCCACAAAGTACAATaGGAAATATCAGGAACACTC +
Preference number: 2 (lower is better)
Translates to: HLSHDSKLCLWKGELPLHLHKVQ*EISGTL
Trigger: GAGTGTTCCTGATATTTCCCATTGTACTTTGTGGAG...GTGAAGTGGGAGCTCTCCTTTCCAAAGGCAGAGCTTACTGTCATGGCTCAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR CCA 90 bp AGAACACAGCCGTTGGAACTGGGCTCACAGCACCTTTGCTGCATATATTCTTCTTCTCCTCCATGGTTCTaGCACTTAGATCACAAACCT +
Preference number: 2 (lower is better)
Translates to: RTQPLELGSQHLCCIYSSSPPWF*HLDHKP
Trigger: AGGTTTGTGATCTAAGTGCCAGAACCATGGAGGAGA...AGAAGAATATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR CCA 90 bp GTGGGGAAGAAAGAAATCACGGCCACCTGGAATTACAGCCACCCTGAAGAAGGAGAGTTTCACTGCAGCTaGTTGCTGAAAATAATGATG +
Preference number: 2 (lower is better)
Translates to: VGKKEITATWNYSHPEEGEFHCS*LLKIMM
Trigger: CATCATTATTTTCAGCAACCAGCTGCAGTGAAACTC...TCCTTCTTCAGGGTGGCTGTAATTCCAGGTGGCCGTGATTTCTTTCTTCCCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR CAA 90 bp GGTCCTCAGAGTCAATCCCTCCTGTCTGGATTCATCAGTCATGGTTaGATCGTCTCCATTCGCAGAATAAGCTCCAGCTTTTCTATATAC +
Preference number: 2 (lower is better)
Translates to: GPQSQSLLSGFISHG*IVSIRRISSSFSIY
Trigger: GTATATAGAAAAGCTGGAGCTTATTCTGCGAATGGAGACGATCAAACCATGACTGATGAATCCAGACAGGAGGGATTGACTCTGAGGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR TCA 90 bp GTGTATTTTGTTGTTACTGAACTAGCCTATACAGAACCGTCTGTGTCCTCCCAAGTTCACAGAGTGGATTaGTGTAGCTCAGGTCCTCAG +
Preference number: 2 (lower is better)
Translates to: VYFVVTELAYTEPSVSSQVHRVD*CSSGPQ
Trigger: CTGAGGACCTGAGCTACATCAATCCACTCTGTGAAC...TTGGGAGGACACAGACGGTTCTGTATAGGCTAGTTCAGTAACAACAAAATACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR TCA 90 bp AGGGGAAGGGCTGTTAAAAACACAAGTATTCTTGTGAAATACTTCGATCTGAGCGGATTTTACTTTCGGTaGGCACTGAAGCCTGCTGGC +
Preference number: 2 (lower is better)
Translates to: RGRAVKNTSILVKYFDLSGFYFR*ALKPAG
Trigger: GCCAGCAGGCTTCAGTGCTCACCGAAAGTAAAATCC...GCTCAGATCGAAGTATTTCACAAGAATACTTGTGTTTTTAACAGCCCTTCCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR TCA 90 bp AGAACCGTAAACAGCAACACAACACTCTCCCAAGGTGCCCAGCTCAAAGGCATCTTGCTTTATTCTTGCTaGAGGAGGGGATTTTACTTT +
Preference number: 2 (lower is better)
Translates to: RTVNSNTTLSQGAQLKGILLYSC*RRGFYF
Trigger: AAAGTAAAATCCCCTCCTTCAGCAAGAATAAAGCAA...GATGCCTTTGAGCTGGGCACCTTGGGAGAGTGTTGTGTTGCTGTTTACGGTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR TCA 90 bp TCCCAGAGAAGTGAAGAAATGATTGGCATTAAGGAGTCCACACAACCAGGGCAGGACAAGAGTTGTTCCTaGGTTAAAACCTGCTACAAC +
Preference number: 2 (lower is better)
Translates to: SQRSEEMIGIKESTQPGQDKSCS*VKTCYN
Trigger: GTTGTAGCAGGTTTTAACTCAGGAACAACTCTTGTC...CTGCCCTGGTTGTGTGGACTCCTTAATGCCAATCATTTCTTCACTTCTCTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR TCA 90 bp AGAACACAGCCGTTGGAACTGGGCTCACAGCACCTTTGCTGCATATATTCTTCTCTCTCCACAACTACTTaGTCAGTGTTCATAGCACTT +
Preference number: 2 (lower is better)
Translates to: RTQPLELGSQHLCCIYSSLSTTT*SVFIAL
Trigger: AAGTGCTATGAACACTGATCAAGTAGTTGTGGAGAG...AGAAGAATATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR GCA 90 bp GTGGGGAAGAAAGAAATCACGGCCACCTGGAATTACAGCCACCCTGAAGAAGGATACAGGCTTGCTATGTaGCTTATAACAGAAATCACT +
Preference number: 2 (lower is better)
Translates to: VGKKEITATWNYSHPEEGYRLAM*LITEIT
Trigger: AGTGATTTCTGTTATAAGGCACATAGCAAGCCTGTA...TCCTTCTTCAGGGTGGCTGTAATTCCAGGTGGCCGTGATTTCTTTCTTCCCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR GCA 90 bp GAACTGTGCGTGAGGAGGCACAATTCAGGGTTGTTTCTCGAGAACACTCATTGGAAAACAATTCACTACTaGACGAAGAGGGCCAAAGAT +
Preference number: 2 (lower is better)
Translates to: ELCVRRHNSGLFLENTHWKTIHY*TKRAKD
Trigger: ATCTTTGGCCCTCTTCGTGCAGTAGTGAATTGTTTT...CCAATGAGTGTTCTCGAGAAACAACCCTGAATTGTGCCTCCTCACGCACAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544132.2
3UTR-3UTR CCA 90 bp TATCAAGTTCCCACCCCCTTGGGAGGTCACACGGTGAAACAGACACAGTTATATTGGATTCATCAGTCATaGTTTGATCGTCTCCATTCG +
Preference number: 2 (lower is better)
Translates to: YQVPTPLGGHTVKQTQLYWIHQS*FDRLHS
Trigger: CGAATGGAGACGATCAAACCATGACTGATGAATCCA...ATATAACTGTGTCTGTTTCACCGTGTGACCTCCCAAGGGGGTGGGAACTTGATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp CAAAGGAGTAACCCTCGGGCAAATCGTGGCCCCTTTAAACGTTTATATCAAGTTAGAAACCCGCAGGTCTaGGACTGTAATGCTGCTTTA +
Preference number: 2 (lower is better)
Translates to: QRSNPRANRGPFKRLYQVRNPQV*DCNAAL
Trigger: TAAAGCAGCATTACAGTCCCAGACCTGCGGGTTTCT...AACTTGATATAAACGTTTAAAGGGGCCACGATTTGCCCGAGGGTTACTCCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp CAAAGGAGTAACCCTCGGGCAAATCGTGGCCCCTTTAAACGTTTATATCAAGTTTATCAGCCTGCAGCATaGCCTCCATCTGTTTTCATC +
Preference number: 2 (lower is better)
Translates to: QRSNPRANRGPFKRLYQVYQPAA*PPSVFI
Trigger: GATGAAAACAGATGGAGGCCATGCTGCAGGCTGATA...AACTTGATATAAACGTTTAAAGGGGCCACGATTTGCCCGAGGGTTACTCCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp CCATTAGCTTGTTCCATGCTGAATGAAGCCACCCAACTTTCTAAACAACGTGCTTGGGGTTGCTGTAAATaGAGTTTCACTGCAGCTGGT +
Preference number: 2 (lower is better)
Translates to: PLACSMLNEATQLSKQRAWGCCK*SFTAAG
Trigger: ACCAGCTGCAGTGAAACTCCATTTACAGCAACCCCA...AGCACGTTGTTTAGAAAGTTGGGTGGCTTCATTCAGCATGGAACAAGCTAATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR CAA 90 bp TACTTGTGGCAAGCGTTATTTCAAAGGGAACACCATTTAGGCCATTaGCAAAGGCCTGGTGATGGCTTAAACCTACCTTCTAGTTCAGAC +
Preference number: 2 (lower is better)
Translates to: YLWQALFQREHHLGH*QRPGDGLNLPSSSD
Trigger: GTCTGAACTAGAAGGTAGGTTTAAGCCATCACCAGGCCTTTGCAAATGGCCTAAATGGTGTTCCCTTTGAAATAACGCTTGCCACAAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR TCA 90 bp TCCCAGAGAAGTGAAGAAATGATTGGCATTAAGGAGTCCACACAACCAGGGCAGCTTTTAGTCAGTCACTaGACTTATTGCAGAATGAGG +
Preference number: 2 (lower is better)
Translates to: SQRSEEMIGIKESTQPGQLLVSH*TYCRMR
Trigger: CCTCATTCTGCAATAAGTTCAGTGACTGACTAAAAG...CTGCCCTGGTTGTGTGGACTCCTTAATGCCAATCATTTCTTCACTTCTCTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR TCA 90 bp GTGTATTTTGTTGTTACTGAACTAGCCTATACAGAACCGTCTGTGTCCTCCCAACGCAGCAAACTCATCTaGGAATCACAGTACTCAGAC +
Preference number: 2 (lower is better)
Translates to: VYFVVTELAYTEPSVSSQRSKLI*ESQYSD
Trigger: GTCTGAGTACTGTGATTCTCAGATGAGTTTGCTGCG...TTGGGAGGACACAGACGGTTCTGTATAGGCTAGTTCAGTAACAACAAAATACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR TCA 90 bp CCTGCTACAACAGCAAACTCCAATAAACTCAAGTTGAATGGTTTCCCACTGCAATTGCTTGTGCCCGCATaGGTGAATGATCTGCTAAGT +
Preference number: 2 (lower is better)
Translates to: PATTANSNKLKLNGFPLQLLVPA*VNDLLS
Trigger: ACTTAGCAGATCATTCACTCATGCGGGCACAAGCAA...TTGCAGTGGGAAACCATTCAACTTGAGTTTATTGGAGTTTGCTGTTGTAGCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR TCA 90 bp CAAAGGAGTAACCCTCGGGCAAATCGTGGCCCCTTTAAACGTTTATATCAAGTTTGGGAGGTCACACGGTaGAACAGACACAGTTATATA +
Preference number: 2 (lower is better)
Translates to: QRSNPRANRGPFKRLYQVWEVTR*NRHSYI
Trigger: TATATAACTGTGTCTGTTTCACCGTGTGACCTCCCA...AACTTGATATAAACGTTTAAAGGGGCCACGATTTGCCCGAGGGTTACTCCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR GCA 90 bp AGAACACAGCCGTTGGAACTGGGCTCACAGCACCTTTGCTGCATATATTCTTCTCTAAGAAAAGCAGGCTaGGATACAACAAGCATTTGT +
Preference number: 2 (lower is better)
Translates to: RTQPLELGSQHLCCIYSSLRKAG*DTTSIC
Trigger: ACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAG...AGAAGAATATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR GCA 90 bp GCTTGTTCCATGCTGAATGAAGCCACCCAACTTTCTAAACAACGTGCTACTGCCCTAAGAAAAGCAGGCTaGGATACAACAAGCATTTGT +
Preference number: 2 (lower is better)
Translates to: ACSMLNEATQLSKQRATALRKAG*DTTSIC
Trigger: ACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAG...GGCAGTAGCACGTTGTTTAGAAAGTTGGGTGGCTTCATTCAGCATGGAACAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR GCA 90 bp GGATTTGATGCTACAACTGAATGCAACAGGTCACATTCAGTGCTTTTTGAAGCAGCCCACATGCTGTTCTaGACGATTACCAGAACACAG +
Preference number: 2 (lower is better)
Translates to: GFDATTECNRSHSVLFEAAHMLF*TITRTQ
Trigger: CTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGC...TGCTTCAAAAAGCACTGAATGTGACCTGTTGCATTCAGTTGTAGCATCAAATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR GCA 90 bp GAAATTGGTCTGAGTGAGGCCAGTGAAAACTCCTTACAACAAATCCCAGGAAAACTTGCAGAGGCTGAATaGTTCAGCTTTCGGGCTTTA +
Preference number: 2 (lower is better)
Translates to: EIGLSEASENSLQQIPGKLAEAE*FSFRAL
Trigger: TAAAGCCCGAAAGCTGAAGCATTCAGCCTCTGCAAG...TTTTCCTGGGATTTGTTGTAAGGAGTTTTCACTGGCCTCACTCAGACCAATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR CCA 90 bp ACGGTGAAACAGACACAGTTATATACAACAGGGCAGGTTTTTAAAAAGAGTTGCTGCACTGGAACACAGTaGGGGAAACGTTCCCTGCTT +
Preference number: 2 (lower is better)
Translates to: TVKQTQLYTTGQVFKKSCCTGTQ*GKRSLL
Trigger: AAGCAGGGAACGTTTCCCCCACTGTGTTCCAGTGCA...GCAACTCTTTTTAAAAACCTGCCCTGTTGTATATAACTGTGTCTGTTTCACCGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp GGATTTGATGCTACAACTGAATGCAACAGGTCACATTCAGTGCTTTTTGAAGCACCAGAGTCTCCTCCATaGTTCTGGCACTTAGATCAC +
Preference number: 2 (lower is better)
Translates to: GFDATTECNRSHSVLFEAPESPP*FWHLDH
Trigger: GTGATCTAAGTGCCAGAACCATGGAGGAGACTCTGG...TGCTTCAAAAAGCACTGAATGTGACCTGTTGCATTCAGTTGTAGCATCAAATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR CAA 90 bp TGCCTATGTTACTTAGTGGAACCTAAGGTGTATATTGCTTTATTCTaGCTGAAGGAGGGGATTTTACTTTCGGTGAGCACTGAAGCCTGC +
Preference number: 2 (lower is better)
Translates to: CLCYLVEPKVYIALF*LKEGILLSVSTEAC
Trigger: GCAGGCTTCAGTGCTCACCGAAAGTAAAATCCCCTCCTTCAGCAAGAATAAAGCAATATACACCTTAGGTTCCACTAAGTAACATAGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR TCA 90 bp GTGTATTTTGTTGTTACTGAACTAGCCTATACAGAACCGTCTGTGTCCTCCCAAACTTCTGAATGGGACTaGAGTGTATCTCTGCAGGTA +
Preference number: 2 (lower is better)
Translates to: VYFVVTELAYTEPSVSSQTSEWD*SVSLQV
Trigger: TACCTGCAGAGATACACTTCAGTCCCATTCAGAAGT...TTGGGAGGACACAGACGGTTCTGTATAGGCTAGTTCAGTAACAACAAAATACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR TCA 90 bp AGGGGAAGGGCTGTTAAAAACACAAGTATTCTTGTGAAATACTTCGATCTGAGCCGCAGCAAACTCATCTaGGAATCACAGTACTCAGAC +
Preference number: 2 (lower is better)
Translates to: RGRAVKNTSILVKYFDLSRSKLI*ESQYSD
Trigger: GTCTGAGTACTGTGATTCTCAGATGAGTTTGCTGCG...GCTCAGATCGAAGTATTTCACAAGAATACTTGTGTTTTTAACAGCCCTTCCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR TCA 90 bp ATCTACAGGATAAGAAATGGCTTCATCTCCTCATCCATACAAGGTGAGAGCAAACGCAGCAAACTCATCTaGGAATCACAGTACTCAGAC +
Preference number: 2 (lower is better)
Translates to: IYRIRNGFISSSIQGESKRSKLI*ESQYSD
Trigger: GTCTGAGTACTGTGATTCTCAGATGAGTTTGCTGCG...TTTGCTCTCACCTTGTATGGATGAGGAGATGAAGCCATTTCTTATCCTGTAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR TCA 90 bp ACGGTGAAACAGACACAGTTATATACAACAGGGCAGGTTTTTAAAAAGAGTTGCGCCCGCATGAGTGAATaGTCTGCTAAGTTGAGGAAG +
Preference number: 2 (lower is better)
Translates to: TVKQTQLYTTGQVFKKSCARMSE*SAKLRK
Trigger: CTTCCTCAACTTAGCAGATCATTCACTCATGCGGGC...GCAACTCTTTTTAAAAACCTGCCCTGTTGTATATAACTGTGTCTGTTTCACCGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR GCA 90 bp AAAGGAAACCAAAAGCAAAGTCCCTGTGGTCACCCTTATTTATTGCTGAAGCAGGGGGGAAACGTTCCCTaGTTATGCCTATGTTACTTA +
Preference number: 2 (lower is better)
Translates to: KGNQKQSPCGHPYLLLKQGGNVP*LCLCYL
Trigger: TAAGTAACATAGGCATAAGCAGGGAACGTTTCCCCC...CTGCTTCAGCAATAAATAAGGGTGACCACAGGGACTTTGCTTTTGGTTTCCTTT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR GCA 90 bp GCTTGTTCCATGCTGAATGAAGCCACCCAACTTTCTAAACAACGTGCTACTGCCTATAACAGAAATCACTaGAATTCAGGGAAGTTTGGG +
Preference number: 2 (lower is better)
Translates to: ACSMLNEATQLSKQRATAYNRNH*NSGKFG
Trigger: CCCAAACTTCCCTGAATTGCAGTGATTTCTGTTATA...GGCAGTAGCACGTTGTTTAGAAAGTTGGGTGGCTTCATTCAGCATGGAACAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR GCA 90 bp CCTCTACTACAGTCCAGTAGTCTACACTTGCAGAGGCTGAATGCTTCAGCTTTCTATAACAGAAATCACTaGAATTCAGGGAAGTTTGGG +
Preference number: 2 (lower is better)
Translates to: PLLQSSSLHLQRLNASAFYNRNH*NSGKFG
Trigger: CCCAAACTTCCCTGAATTGCAGTGATTTCTGTTATA...GAAAGCTGAAGCATTCAGCCTCTGCAAGTGTAGACTACTGGACTGTAGTAGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR CCA 90 bp CAAAGGAGTAACCCTCGGGCAAATCGTGGCCCCTTTAAACGTTTATATCAAGTTTGGATTCATCAGTCATaGTTTGATCGTCTCCATTCG +
Preference number: 2 (lower is better)
Translates to: QRSNPRANRGPFKRLYQVWIHQS*FDRLHS
Trigger: CGAATGGAGACGATCAAACCATGACTGATGAATCCA...AACTTGATATAAACGTTTAAAGGGGCCACGATTTGCCCGAGGGTTACTCCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp CCTGCTACAACAGCAAACTCCAATAAACTCAAGTTGAATGGTTTCCCACTGCAAGAGATGTTCACAGAGTaGATTGATGTAGCTCAGGTC +
Preference number: 2 (lower is better)
Translates to: PATTANSNKLKLNGFPLQEMFTE*IDVAQV
Trigger: GACCTGAGCTACATCAATCCACTCTGTGAACATCTC...TTGCAGTGGGAAACCATTCAACTTGAGTTTATTGGAGTTTGCTGTTGTAGCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp ATCTACAGGATAAGAAATGGCTTCATCTCCTCATCCATACAAGGTGAGAGCAAAAGAAACCCGCAGGTCTaGGACTGTAATGCTGCTTTA +
Preference number: 2 (lower is better)
Translates to: IYRIRNGFISSSIQGESKRNPQV*DCNAAL
Trigger: TAAAGCAGCATTACAGTCCCAGACCTGCGGGTTTCT...TTTGCTCTCACCTTGTATGGATGAGGAGATGAAGCCATTTCTTATCCTGTAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp GAAATTGGTCTGAGTGAGGCCAGTGAAAACTCCTTACAACAAATCCCAGGAAAACAATTCAGGGAAGTTTaGGGTGAAGATGCGAGTGAA +
Preference number: 2 (lower is better)
Translates to: EIGLSEASENSLQQIPGKQFREV*GEDASE
Trigger: TTCACTCGCATCTTCACCCCAAACTTCCCTGAATTG...TTTTCCTGGGATTTGTTGTAAGGAGTTTTCACTGGCCTCACTCAGACCAATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR CCA 90 bp GGATTTGATGCTACAACTGAATGCAACAGGTCACATTCAGTGCTTTTTGAAGCATGGGGTTGCTGTAAATaGAGTTTCACTGCAGCTGGT +
Preference number: 2 (lower is better)
Translates to: GFDATTECNRSHSVLFEAWGCCK*SFTAAG
Trigger: ACCAGCTGCAGTGAAACTCCATTTACAGCAACCCCA...TGCTTCAAAAAGCACTGAATGTGACCTGTTGCATTCAGTTGTAGCATCAAATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR TCA 90 bp CAAAGGAGTAACCCTCGGGCAAATCGTGGCCCCTTTAAACGTTTATATCAAGTTCTTTTAGTCAGTCACTaGACTTATTGCAGAATGAGG +
Preference number: 2 (lower is better)
Translates to: QRSNPRANRGPFKRLYQVLLVSH*TYCRMR
Trigger: CCTCATTCTGCAATAAGTTCAGTGACTGACTAAAAG...AACTTGATATAAACGTTTAAAGGGGCCACGATTTGCCCGAGGGTTACTCCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR TCA 90 bp AGGGGAAGGGCTGTTAAAAACACAAGTATTCTTGTGAAATACTTCGATCTGAGCACTTCTGAATGGGACTaGAGTGTATCTCTGCAGGTA +
Preference number: 2 (lower is better)
Translates to: RGRAVKNTSILVKYFDLSTSEWD*SVSLQV
Trigger: TACCTGCAGAGATACACTTCAGTCCCATTCAGAAGT...GCTCAGATCGAAGTATTTCACAAGAATACTTGTGTTTTTAACAGCCCTTCCCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR TCA 90 bp CAAAGGAGTAACCCTCGGGCAAATCGTGGCCCCTTTAAACGTTTATATCAAGTTAGTAAGATCTCTCTTTaGGGGAAGACAAAACAGTGT +
Preference number: 2 (lower is better)
Translates to: QRSNPRANRGPFKRLYQVSKISL*GKTKQC
Trigger: ACACTGTTTTGTCTTCCCTCAAAGAGAGATCTTACT...AACTTGATATAAACGTTTAAAGGGGCCACGATTTGCCCGAGGGTTACTCCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR TCA 90 bp ACGGTGAAACAGACACAGTTATATACAACAGGGCAGGTTTTTAAAAAGAGTTGCTTGCTTGTGCCCGCATaGGTGAATGATCTGCTAAGT +
Preference number: 2 (lower is better)
Translates to: TVKQTQLYTTGQVFKKSCLLVPA*VNDLLS
Trigger: ACTTAGCAGATCATTCACTCATGCGGGCACAAGCAA...GCAACTCTTTTTAAAAACCTGCCCTGTTGTATATAACTGTGTCTGTTTCACCGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR GCA 90 bp ATCTACAGGATAAGAAATGGCTTCATCTCCTCATCCATACAAGGTGAGAGCAAAGGGGGAAACGTTCCCTaGTTATGCCTATGTTACTTA +
Preference number: 2 (lower is better)
Translates to: IYRIRNGFISSSIQGESKGGNVP*LCLCYL
Trigger: TAAGTAACATAGGCATAAGCAGGGAACGTTTCCCCC...TTTGCTCTCACCTTGTATGGATGAGGAGATGAAGCCATTTCTTATCCTGTAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp AGGGGAAGGGCTGTTAAAAACACAAGTATTCTTGTGAAATACTTCGATCTGAGCGAGATGTTCACAGAGTaGATTGATGTAGCTCAGGTC +
Preference number: 2 (lower is better)
Translates to: RGRAVKNTSILVKYFDLSEMFTE*IDVAQV
Trigger: GACCTGAGCTACATCAATCCACTCTGTGAACATCTC...GCTCAGATCGAAGTATTTCACAAGAATACTTGTGTTTTTAACAGCCCTTCCCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp TTTGTTGTTACTGAACTAGCCTATACAGAACCGTCTGTGTCCTCCCAAAACGCATCTTATTCACGTAGCTaGAAAGGACATTCTAGCATG +
Preference number: 2 (lower is better)
Translates to: FVVTELAYTEPSVSSQNASYSRS*KGHSSM
Trigger: CATGCTAGAATGTCCTTTCCAGCTACGTGAATAAGA...TGCGTTTTGGGAGGACACAGACGGTTCTGTATAGGCTAGTTCAGTAACAACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp CCATTAGCTTGTTCCATGCTGAATGAAGCCACCCAACTTTCTAAACAACGTGCTCTCCACAAAGTACAATaGGAAATATCAGGAACACTC +
Preference number: 2 (lower is better)
Translates to: PLACSMLNEATQLSKQRALHKVQ*EISGTL
Trigger: GAGTGTTCCTGATATTTCCCATTGTACTTTGTGGAG...AGCACGTTGTTTAGAAAGTTGGGTGGCTTCATTCAGCATGGAACAAGCTAATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR TCA 90 bp CAAAGGAGTAACCCTCGGGCAAATCGTGGCCCCTTTAAACGTTTATATCAAGTTGTATTTTGTTGTTACTaGACTAGCCTATACAGAACC +
Preference number: 2 (lower is better)
Translates to: QRSNPRANRGPFKRLYQVVFCCY*TSLYRT
Trigger: GGTTCTGTATAGGCTAGTTCAGTAACAACAAAATAC...AACTTGATATAAACGTTTAAAGGGGCCACGATTTGCCCGAGGGTTACTCCTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR TCA 90 bp ATCTACAGGATAAGAAATGGCTTCATCTCCTCATCCATACAAGGTGAGAGCAAAACCCTTATTTATTGCTaGAGCAGAACGAAAACCTGC +
Preference number: 2 (lower is better)
Translates to: IYRIRNGFISSSIQGESKTLIYC*SRTKTC
Trigger: GCAGGTTTTCGTTCTGCTTCAGCAATAAATAAGGGT...TTTGCTCTCACCTTGTATGGATGAGGAGATGAAGCCATTTCTTATCCTGTAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR GCA 90 bp ATAGTCAGTCATTCGAATGTATACTCGCATCGGCAGTTAAGCCTCCACAAAGTACTAAGAAAAGCAGGCTaGGATACAACAAGCATTTGT +
Preference number: 2 (lower is better)
Translates to: IVSHSNVYSHRQLSLHKVLRKAG*DTTSIC
Trigger: ACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAG...TACTTTGTGGAGGCTTAACTGCCGATGCGAGTATACATTCGAATGACTGACTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR CCA 90 bp ATCTACAGGATAAGAAATGGCTTCATCTCCTCATCCATACAAGGTGAGAGCAAATCAATCCCTCCTGTCTaGATTCATCAGTCATGGTTT +
Preference number: 2 (lower is better)
Translates to: IYRIRNGFISSSIQGESKSIPPV*IHQSWF
Trigger: AAACCATGACTGATGAATCCAGACAGGAGGGATTGA...TTTGCTCTCACCTTGTATGGATGAGGAGATGAAGCCATTTCTTATCCTGTAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp ACGGTGAAACAGACACAGTTATATACAACAGGGCAGGTTTTTAAAAAGAGTTGCAGCCGAGGAAGATACTaGATCCACAGAAAGAAAAGG +
Preference number: 2 (lower is better)
Translates to: TVKQTQLYTTGQVFKKSCSRGRY*IHRKKR
Trigger: CCTTTTCTTTCTGTGGATCCAGTATCTTCCTCGGCT...GCAACTCTTTTTAAAAACCTGCCCTGTTGTATATAACTGTGTCTGTTTCACCGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp TTGATGCTACAACTGAATGCAACAGGTCACATTCAGTGCTTTTTGAAGCAGAAATCTCCTCCATGGTTCTaGCACTTAGATCACAAACCT +
Preference number: 2 (lower is better)
Translates to: LMLQLNATGHIQCFLKQKSPPWF*HLDHKP
Trigger: AGGTTTGTGATCTAAGTGCCAGAACCATGGAGGAGA...TTTCTGCTTCAAAAAGCACTGAATGTGACCTGTTGCATTCAGTTGTAGCATCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR TCA 90 bp AAAGGAAACCAAAAGCAAAGTCCCTGTGGTCACCCTTATTTATTGCTGAAGCAGGTATTTTGTTGTTACTaGACTAGCCTATACAGAACC +
Preference number: 2 (lower is better)
Translates to: KGNQKQSPCGHPYLLLKQVFCCY*TSLYRT
Trigger: GGTTCTGTATAGGCTAGTTCAGTAACAACAAAATAC...CTGCTTCAGCAATAAATAAGGGTGACCACAGGGACTTTGCTTTTGGTTTCCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR TCA 90 bp CCTGCTACAACAGCAAACTCCAATAAACTCAAGTTGAATGGTTTCCCACTGCAAGTATTTTGTTGTTACTaGACTAGCCTATACAGAACC +
Preference number: 2 (lower is better)
Translates to: PATTANSNKLKLNGFPLQVFCCY*TSLYRT
Trigger: GGTTCTGTATAGGCTAGTTCAGTAACAACAAAATAC...TTGCAGTGGGAAACCATTCAACTTGAGTTTATTGGAGTTTGCTGTTGTAGCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR TCA 90 bp ATCTACAGGATAAGAAATGGCTTCATCTCCTCATCCATACAAGGTGAGAGCAAACCAATAAACTCAAGTTaGATGGTTTCCCACTGCAAT +
Preference number: 2 (lower is better)
Translates to: IYRIRNGFISSSIQGESKPINSS*MVSHCN
Trigger: ATTGCAGTGGGAAACCATTCAACTTGAGTTTATTGG...TTTGCTCTCACCTTGTATGGATGAGGAGATGAAGCCATTTCTTATCCTGTAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR TCA 90 bp ACGGTGAAACAGACACAGTTATATACAACAGGGCAGGTTTTTAAAAAGAGTTGCGACAAGAGTTGTTCCTaGGTTAAAACCTGCTACAAC +
Preference number: 2 (lower is better)
Translates to: TVKQTQLYTTGQVFKKSCDKSCS*VKTCYN
Trigger: GTTGTAGCAGGTTTTAACTCAGGAACAACTCTTGTC...GCAACTCTTTTTAAAAACCTGCCCTGTTGTATATAACTGTGTCTGTTTCACCGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR GCA 90 bp GGATTTGATGCTACAACTGAATGCAACAGGTCACATTCAGTGCTTTTTGAAGCACTAAGAAAAGCAGGCTaGGATACAACAAGCATTTGT +
Preference number: 2 (lower is better)
Translates to: GFDATTECNRSHSVLFEALRKAG*DTTSIC
Trigger: ACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAG...TGCTTCAAAAAGCACTGAATGTGACCTGTTGCATTCAGTTGTAGCATCAAATCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR CCA 90 bp GAAATTGGTCTGAGTGAGGCCAGTGAAAACTCCTTACAACAAATCCCAGGAAAATGTGGTTTTATACTATaGGGTTGCTGTAAATGGAGT +
Preference number: 2 (lower is better)
Translates to: EIGLSEASENSLQQIPGKCGFIL*GCCKWS
Trigger: ACTCCATTTACAGCAACCCCATAGTATAAAACCACA...TTTTCCTGGGATTTGTTGTAAGGAGTTTTCACTGGCCTCACTCAGACCAATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR TCA 90 bp ATCTACAGGATAAGAAATGGCTTCATCTCCTCATCCATACAAGGTGAGAGCAAATTGCTTTATTCTTGCTaGAGGAGGGGATTTTACTTT +
Preference number: 2 (lower is better)
Translates to: IYRIRNGFISSSIQGESKLLYSC*RRGFYF
Trigger: AAAGTAAAATCCCCTCCTTCAGCAAGAATAAAGCAA...TTTGCTCTCACCTTGTATGGATGAGGAGATGAAGCCATTTCTTATCCTGTAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR GCA 90 bp GGATTTGATGCTACAACTGAATGCAACAGGTCACATTCAGTGCTTTTTGAAGCATATAACAGAAATCACTaGAATTCAGGGAAGTTTGGG +
Preference number: 2 (lower is better)
Translates to: GFDATTECNRSHSVLFEAYNRNH*NSGKFG
Trigger: CCCAAACTTCCCTGAATTGCAGTGATTTCTGTTATA...TGCTTCAAAAAGCACTGAATGTGACCTGTTGCATTCAGTTGTAGCATCAAATCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR CCA 90 bp AAAACAGTGTATTTTGTTGTTACTGAACTAGCCTATACAGAACCGTCTGTGTCCTCTTATTCACGTAGCTaGAAAGGACATTCTAGCATG +
Preference number: 2 (lower is better)
Translates to: KTVYFVVTELAYTEPSVSSYSRS*KGHSSM
Trigger: CATGCTAGAATGTCCTTTCCAGCTACGTGAATAAGA...GGACACAGACGGTTCTGTATAGGCTAGTTCAGTAACAACAAAATACACTGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp GGATTTGATGCTACAACTGAATGCAACAGGTCACATTCAGTGCTTTTTGAAGCATGTGGTTTTATACTATaGGGTTGCTGTAAATGGAGT +
Preference number: 2 (lower is better)
Translates to: GFDATTECNRSHSVLFEACGFIL*GCCKWS
Trigger: ACTCCATTTACAGCAACCCCATAGTATAAAACCACA...TGCTTCAAAAAGCACTGAATGTGACCTGTTGCATTCAGTTGTAGCATCAAATCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR GCA 90 bp GGATTTGATGCTACAACTGAATGCAACAGGTCACATTCAGTGCTTTTTGAAGCATTTATACTATGGGGTTaGTGTAAATGGAGTTTCACT +
Preference number: 2 (lower is better)
Translates to: GFDATTECNRSHSVLFEAFILWG*CKWSFT
Trigger: AGTGAAACTCCATTTACAGCAACCCCATAGTATAAA...TGCTTCAAAAAGCACTGAATGTGACCTGTTGCATTCAGTTGTAGCATCAAATCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR CAA 90 bp TTACAACAGTGTAGCATCAACATTGTAGTAGTCAACACTAGGACATaGTCTGTGACATTTAAATTAGGAGTTTCTCCACACTTGTCAACA +
Preference number: 2 (lower is better)
Translates to: LQQCSINIVVVNTRT*SVTFKLGVSPHLST
Trigger: TGTTGACAAGTGTGGAGAAACTCCTAATTTAAATGTCACAGACAATGTCCTAGTGTTGACTACTACAATGTTGATGCTACACTGTTGTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR GCA 72 bp GTGGTAGGCGGGCGTCAGCGGCGCGGGCTTGCTGTCTaGGTGCTTGCTGGACGGAGTGACCGGGTGGGAGGG +
Preference number: 3 (lower is better)
Translates to: VVGGRQRRGLAV*VLAGRSDRVGG
Trigger: CCCTCCCACCCGGTCACTCCGTCCAGCAAGCACGCAGACAGCAAGCCCGCGCCGCTGACGCCCGCCTACCAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469877.5
3UTR GCA 72 bp GGGGGTGCTGCCACAGCACGGTGGAGGCCCTGGTGCTaGGGAACGAACCAGGCATCCACCAGGCTTCTGCTT +
Preference number: 3 (lower is better)
Translates to: GGAATARWRPWC*GTNQASTRLLL
Trigger: AAGCAGAAGCCTGGTGGATGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCACCGTGCTGTGGCAGCACCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CAA 90 bp GTGGGAGGGGTGGGGCAGCGTGTGGTAGGCGGGCGTCAGCGGCGCGGGCTTGCTTGCAGATCCTGCTGGTaGTTGCACGACACTAATATC +
Preference number: 3 (lower is better)
Translates to: VGGVGQRVVGGRQRRGLACRSCW*LHDTNI
Trigger: GATATTAGTGTCGTGCAACAACCAGCAGGATCTGCA...AGCAAGCCCGCGCCGCTGACGCCCGCCTACCACACGCTGCCCCACCCCTCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469877.5
3UTR-3UTR CAA 90 bp CGTGTGGTAGGCGGGCGTCAGCGGCGCGGGCTTGCTGTCTGCGTGCTTGCTGGAAGATCCTGCTGGTTGTaGCACGACACTAATATCCGC +
Preference number: 3 (lower is better)
Translates to: RVVGGRQRRGLAVCVLAGRSCWL*HDTNIR
Trigger: GCGGATATTAGTGTCGTGCAACAACCAGCAGGATCT...TCCAGCAAGCACGCAGACAGCAAGCCCGCGCCGCTGACGCCCGCCTACCACACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469877.5
3UTR TCA 72 bp ATGGGGCAGGTCCACGCTGAGCCCAGGCAGACAACGTaGCCAGTCACGGAAGGAAGCCAAAGGGGCTTGCTG +
Preference number: 3 (lower is better)
Translates to: MGQVHAEPRQTT*PVTEGSQRGLL
Trigger: CAGCAAGCCCCTTTGGCTTCCTTCCGTGACTGGTCACGTTGTCTGCCTGGGCTCAGCGTGGACCTGCCCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR GCA 72 bp CCAGCGAGCCGCGGTGAGGACAGGCTTCGTCTCCTCTaGACTGGAACACAGTGGGGGAAACGTTCCCTGCTT +
Preference number: 3 (lower is better)
Translates to: PASRGEDRLRLL*TGTQWGKRSLL
Trigger: AAGCAGGGAACGTTTCCCCCACTGTGTTCCAGTGCAGAGGAGACGAAGCCTGTCCTCACCGCGGCTCGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR CCA 72 bp ACAACGCAGCACACAGAAGAGCACAGAGCCGTGAGGTaGAGACAAGCTCTGAACACACGTGACGCCCGCCCG +
Preference number: 3 (lower is better)
Translates to: TTQHTEEHRAVR*RQALNTRDARP
Trigger: CGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGCTCTGTGCTCTTCTGTGTGCTGCGTTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR GCA 72 bp GCAATTCTAGTGAAAAGTCCAGGTGAGGCCAGGTTCTaGAGCATGGGGCAGGTCCACGCTGAGCCCAGGCAG +
Preference number: 3 (lower is better)
Translates to: AILVKSPGEARF*SMGQVHAEPRQ
Trigger: CTGCCTGGGCTCAGCGTGGACCTGCCCCATGCTGCAGAACCTGGCCTCACCTGGACTTTTCACTAGAATTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CAA 90 bp CTGGGGACTCGGACAGCAACGCTACCGGCTCCGAGAGGACAGTTAATGTCGCCTCCGTATGGGCCTTCCTaGAGGTCAAGACTGAGTCTG +
Preference number: 3 (lower is better)
Translates to: LGTRTATLPAPRGQLMSPPYGPS*RSRLSL
Trigger: CAGACTCAGTCTTGACCTCAAGGAAGGCCCATACGG...AGGCGACATTAACTGTCCTCTCGGAGCCGGTAGCGTTGCTGTCCGAGTCCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR TCA 72 bp ACTGGATCCACAGAAAGAAAAGGCAATGCCGTAACATaGGGCCCTCATGGCCGCACCGTCCAGGGGAAGGGC +
Preference number: 3 (lower is better)
Translates to: TGSTERKGNAVT*GPHGRTVQGKG
Trigger: GCCCTTCCCCTGGACGGTGCGGCCATGAGGGCCTCATGTTACGGCATTGCCTTTTCTTTCTGTGGATCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CAA 90 bp AACGAAAACCTGCTCCACGGGCCGGGCTTCCTGCCCAGGACCGCACAGGCTTTCTTCATCAGTCATGGTTaGATCGTCTCCATTCGCAGA +
Preference number: 3 (lower is better)
Translates to: NENLLHGPGFLPRTAQAFFISHG*IVSIRR
Trigger: TCTGCGAATGGAGACGATCAAACCATGACTGATGAA...GAAAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGTGGAGCAGGTTTTCGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR GCA 72 bp AAGGAGGGGATTTTACTTTCGGTGAGCACTGAAGCCTaGTGGCTACGGCCAATGGTGGAGGAGACCTCGGGA +
Preference number: 3 (lower is better)
Translates to: KEGILLSVSTEA*WLRPMVEETSG
Trigger: TCCCGAGGTCTCCTCCACCATTGGCCGTAGCCAGCAGGCTTCAGTGCTCACCGAAAGTAAAATCCCCTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR CCA 72 bp GAGCAAACACCTCTAGGTGGATGCGGCAGTGCCGTATaGGCCTTCCTTGAGGTCAAGACTGAGTCTGTCAGC +
Preference number: 3 (lower is better)
Translates to: EQTPLGGCGSAV*AFLEVKTESVS
Trigger: GCTGACAGACTCAGTCTTGACCTCAAGGAAGGCCCATACGGCACTGCCGCATCCACCTAGAGGTGTTTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR CCA 72 bp GGCTCTTCCAGACAACATAAGTATGGATGTCAGGGGTaGGGAGCCGGGGGAACTGAAGCCACAGCACTTGAC +
Preference number: 3 (lower is better)
Translates to: GSSRQHKYGCQG*GAGGTEATALD
Trigger: GTCAAGTGCTGTGGCTTCAGTTCCCCCGGCTCCCCACCCCTGACATCCATACTTATGTTGTCTGGAAGAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR TCA 72 bp CTTGCTGAAGGAGGGGATTTTACTTTCGGTGAGCACTaGAGCCTGCTGGCTACGGCCAATGGTGGAGGAGAC +
Preference number: 3 (lower is better)
Translates to: LAEGGDFTFGEH*SLLATANGGGD
Trigger: GTCTCCTCCACCATTGGCCGTAGCCAGCAGGCTTCAGTGCTCACCGAAAGTAAAATCCCCTCCTTCAGCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR TCA 72 bp CCCCTTACGAAGAGCACCCTCGGATGTAGGCTCACGTaGACACACCACCTCCCTCCAATAGTCAGTCATTCG +
Preference number: 3 (lower is better)
Translates to: PLTKSTLGCRLT*THHLPPIVSHS
Trigger: CGAATGACTGACTATTGGAGGGAGGTGGTGTGTTCACGTGAGCCTACATCCGAGGGTGCTCTTCGTAAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR GCA 72 bp GAACCAGGCATCCACCAGGCTTCTGCTTCCGGTGGATaGGGGCATGGGACTTCTTATTCACGTAGCTGGAAA +
Preference number: 3 (lower is better)
Translates to: EPGIHQASASGG*GHGTSYSRSWK
Trigger: TTTCCAGCTACGTGAATAAGAAGTCCCATGCCCGCATCCACCGGAAGCAGAAGCCTGGTGGATGCCTGGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR GCA 72 bp GCAGAAGCAGCTTCCCACCCAAGCACCTCTGAACTGTaGGTGAGGAGGCACAATTCAGGGTTGTTTCTCGAG +
Preference number: 3 (lower is better)
Translates to: AEAASHPSTSEL*VRRHNSGLFLE
Trigger: CTCGAGAAACAACCCTGAATTGTGCCTCCTCACGCACAGTTCAGAGGTGCTTGGGTGGGAAGCTGCTTCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544132.2
3UTR CCA 72 bp CGTGACCAGTCACGGAAGGAAGCCAAAGGGGCTTGCTaGGCACCAGAGACTGTAATTAGCAAGGGCAAGGAA +
Preference number: 3 (lower is better)
Translates to: RDQSRKEAKGAC*APETVISKGKE
Trigger: TTCCTTGCCCTTGCTAATTACAGTCTCTGGTGCCCAGCAAGCCCCTTTGGCTTCCTTCCGTGACTGGTCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CAA 90 bp CTGGGGACTCGGACAGCAACGCTACCGGCTCCGAGAGGACAGTTAATGTCGCCTTTCATCAGTCATGGTTaGATCGTCTCCATTCGCAGA +
Preference number: 3 (lower is better)
Translates to: LGTRTATLPAPRGQLMSPFISHG*IVSIRR
Trigger: TCTGCGAATGGAGACGATCAAACCATGACTGATGAA...AGGCGACATTAACTGTCCTCTCGGAGCCGGTAGCGTTGCTGTCCGAGTCCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CAA 90 bp AGAGCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGTCTCTCCACAACTACTaGATCAGTGTTCATAGCACT +
Preference number: 3 (lower is better)
Translates to: RAVRWRQALNTRDARPSVSLHNY*ISVHST
Trigger: AGTGCTATGAACACTGATCAAGTAGTTGTGGAGAGA...CACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR CAA 90 bp CTAGGGCCACACGGAGCAGAAGCAGCTTCCCACCCAAGCACCTCTGAACTGTGCAGGCACAATTCAGGGTaGTTTCTCGAGAACACTCAT +
Preference number: 3 (lower is better)
Translates to: LGPHGAEAASHPSTSELCRHNSG*FLENTH
Trigger: ATGAGTGTTCTCGAGAAACAACCCTGAATTGTGCCT...GCACAGTTCAGAGGTGCTTGGGTGGGAAGCTGCTTCTGCTCCGTGTGGCCCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544132.2
3UTR TCA 72 bp GCAACTGTGTTTGAGTGTTGTGGTCTACACAGCCCATaGCACAGGCAACCCACGCCTACGAGAAGGCAAAGG +
Preference number: 3 (lower is better)
Translates to: ATVFECCGLHSP*HRQPTPTRRQR
Trigger: CCTTTGCCTTCTCGTAGGCGTGGGTTGCCTGTGTCATGGGCTGTGTAGACCACAACACTCAAACACAGTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR GCA 72 bp GATGCGAGTGAACATCTGAGCCATGACAGTAAGCTCTaGCTTTGGAAAGGAGAGCTCCCACTTCACGGCCAC +
Preference number: 3 (lower is better)
Translates to: DASEHLSHDSKL*LWKGELPLHGH
Trigger: GTGGCCGTGAAGTGGGAGCTCTCCTTTCCAAAGGCAGAGCTTACTGTCATGGCTCAGATGTTCACTCGCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR GCA 72 bp GGTGCTCCACCCATTCCTGCAGATCCTGCTGGTTGTTaGACGACACTAATATCCGCTCAATCATGCTCCCTG +
Preference number: 3 (lower is better)
Translates to: GAPPIPADPAGC*TTLISAQSCSL
Trigger: CAGGGAGCATGATTGAGCGGATATTAGTGTCGTGCAACAACCAGCAGGATCTGCAGGAATGGGTGGAGCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469877.5
3UTR CCA 72 bp GGTGGATGCGGGCATGGGACTTCTTATTCACGTAGCTaGAAAGGACATTCTAGCATGGGGATTAGCCCGGAC +
Preference number: 3 (lower is better)
Translates to: GGCGHGTSYSRS*KGHSSMGISPD
Trigger: GTCCGGGCTAATCCCCATGCTAGAATGTCCTTTCCAGCTACGTGAATAAGAAGTCCCATGCCCGCATCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR CCA 72 bp GATCAGAACACTGAATACGTGGGTTTGGCGAAGGAGTaGGCAGTGGGGAAGAAAGAAATCACGGCCACCTGG +
Preference number: 3 (lower is better)
Translates to: DQNTEYVGLAKE*AVGKKEITATW
Trigger: CCAGGTGGCCGTGATTTCTTTCTTCCCCACTGCCCACTCCTTCGCCAAACCCACGTATTCAGTGTTCTGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR CAA 90 bp AGAACCGTAAACAGCAACACAACACTCTCCCAAGGTGCCCAGCTCAAAGGCATCCCGTATGGGCCTTCCTaGAGGTCAAGACTGAGTCTG +
Preference number: 3 (lower is better)
Translates to: RTVNSNTTLSQGAQLKGIPYGPS*RSRLSL
Trigger: CAGACTCAGTCTTGACCTCAAGGAAGGCCCATACGG...GATGCCTTTGAGCTGGGCACCTTGGGAGAGTGTTGTGTTGCTGTTTACGGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR TCA 72 bp CTTGTGAGCAGCAGGACCCGGCTCCCAGGACAAGACTaGTACTGCATCAGAGTTCACTCTGCACAAACAAGA +
Preference number: 3 (lower is better)
Translates to: LVSSRTRLPGQD*YCIRVHSAQTR
Trigger: TCTTGTTTGTGCAGAGTGAACTCTGATGCAGTATCAGTCTTGTCCTGGGAGCCGGGTCCTGCTGCTCACAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR TCA 72 bp AAGCAGCTTCCCACCCAAGCACCTCTGAACTGTGCGTaGGGAGGCACAATTCAGGGTTGTTTCTCGAGAACA +
Preference number: 3 (lower is better)
Translates to: KQLPTQAPLNCA*GGTIQGCFSRT
Trigger: TGTTCTCGAGAAACAACCCTGAATTGTGCCTCCTCACGCACAGTTCAGAGGTGCTTGGGTGGGAAGCTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544132.2
3UTR GCA 72 bp TTTCCCACAGACGTGACCTTCGTTTGCTTCTGTAGGTaGTCCACCCATTCCTGCAGATCCTGCTGGTTGTTG +
Preference number: 3 (lower is better)
Translates to: FPTDVTFVCFCR*STHSCRSCWLL
Trigger: CAACAACCAGCAGGATCTGCAGGAATGGGTGGAGCACCTACAGAAGCAAACGAAGGTCACGTCTGTGGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469877.5
3UTR CCA 72 bp GAGGACAGGCTTCGTCTCCTCTGCACTGGAACACAGTaGGGGAAACGTTCCCTGCTTATGCCTATGTTACTT +
Preference number: 3 (lower is better)
Translates to: EDRLRLLCTGTQ*GKRSLLMPMLL
Trigger: AAGTAACATAGGCATAAGCAGGGAACGTTTCCCCCACTGTGTTCCAGTGCAGAGGAGACGAAGCCTGTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR CCA 72 bp AGTGAACATCTGAGCCATGACAGTAAGCTCTGCCTTTaGAAAGGAGAGCTCCCACTTCACGGCCACAACGCA +
Preference number: 3 (lower is better)
Translates to: SEHLSHDSKLCL*KGELPLHGHNA
Trigger: TGCGTTGTGGCCGTGAAGTGGGAGCTCTCCTTTCCAAAGGCAGAGCTTACTGTCATGGCTCAGATGTTCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR CAA 90 bp CTGGGGACTCGGACAGCAACGCTACCGGCTCCGAGAGGACAGTTAATGTCGCCTTCCAATAAACTCAAGTaGAATGGTTTCCCACTGCAA +
Preference number: 3 (lower is better)
Translates to: LGTRTATLPAPRGQLMSPSNKLK*NGFPLQ
Trigger: TTGCAGTGGGAAACCATTCAACTTGAGTTTATTGGA...AGGCGACATTAACTGTCCTCTCGGAGCCGGTAGCGTTGCTGTCCGAGTCCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CAA 90 bp ACCTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCTCTCTCCACAACTACTaGATCAGTGTTCATAGCACT +
Preference number: 3 (lower is better)
Translates to: TCQGPEPTCCSARLPEHSSLHNY*ISVHST
Trigger: AGTGCTATGAACACTGATCAAGTAGTTGTGGAGAGA...GCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR CAA 90 bp AAAGTAGAAACAATGGCCCTCTGGATGCCACATCGCCACTGCCACAGGAGAACTGGGACAGAACACAATTaGGCCCCTCAAGCAATGACT +
Preference number: 3 (lower is better)
Translates to: KVETMALWMPHRHCHRRTGTEHN*APQAMT
Trigger: AGTCATTGCTTGAGGGGCCAAATTGTGTTCTGTCCC...AGTTCTCCTGTGGCAGTGGCGATGTGGCATCCAGAGGGCCATTGTTTCTACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR TCA 72 bp AAAAGCAAAGTCCCTGTGGTCACCCTTATTTATTGCTaGAGCAGAACGAAAACCTGCTCCACGGGCCGGGCT +
Preference number: 3 (lower is better)
Translates to: KSKVPVVTLIYC*SRTKTCSTGRA
Trigger: AGCCCGGCCCGTGGAGCAGGTTTTCGTTCTGCTTCAGCAATAAATAAGGGTGACCACAGGGACTTTGCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR TCA 72 bp CTGAATGAGGCTTTATGGTGGGGTTTCCCACAGACGTaGCCTTCGTTTGCTTCTGTAGGTGCTCCACCCATT +
Preference number: 3 (lower is better)
Translates to: LNEALWWGFPQT*PSFASVGAPPI
Trigger: AATGGGTGGAGCACCTACAGAAGCAAACGAAGGTCACGTCTGTGGGAAACCCCACCATAAAGCCTCATTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469877.5
3UTR GCA 72 bp TGCTTCTGTAGGTGCTCCACCCATTCCTGCAGATCCTaGTGGTTGTTGCACGACACTAATATCCGCTCAATC +
Preference number: 3 (lower is better)
Translates to: CFCRCSTHSCRS*WLLHDTNIRSI
Trigger: GATTGAGCGGATATTAGTGTCGTGCAACAACCAGCAGGATCTGCAGGAATGGGTGGAGCACCTACAGAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469877.5
3UTR CCA 72 bp ACACTGAATACGTGGGTTTGGCGAAGGAGTGGGCAGTaGGGAAGAAAGAAATCACGGCCACCTGGAATTACA +
Preference number: 3 (lower is better)
Translates to: TLNTWVWRRSGQ*GRKKSRPPGIT
Trigger: TGTAATTCCAGGTGGCCGTGATTTCTTTCTTCCCCACTGCCCACTCCTTCGCCAAACCCACGTATTCAGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR CAA 90 bp CTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGCGATACAACAAGCATTaGTTAAGAAAAGCTCAGAAG +
Preference number: 3 (lower is better)
Translates to: LPRPRAHMLFCTITRTQPRYNKH*LRKAQK
Trigger: CTTCTGAGCTTTTCTTAACAAATGCTTGTTGTATCG...CGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR CAA 90 bp CATCTGAGCCATGACAGTAAGCTCTGCCTTTGGAAAGGAGAGCTCCCACTTCACGGGCTCACAGCACCTTaGCTGCATATATTCTTCTCA +
Preference number: 3 (lower is better)
Translates to: HLSHDSKLCLWKGELPLHGLTAP*LHIFFS
Trigger: TGAGAAGAATATATGCAGCAAAGGTGCTGTGAGCCC...GTGAAGTGGGAGCTCTCCTTTCCAAAGGCAGAGCTTACTGTCATGGCTCAGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR CAA 90 bp AAAGTAGAAACAATGGCCCTCTGGATGCCACATCGCCACTGCCACAGGAGAACTGGGCTCACAGCACCTTaGCTGCATATATTCTTCTCA +
Preference number: 3 (lower is better)
Translates to: KVETMALWMPHRHCHRRTGLTAP*LHIFFS
Trigger: TGAGAAGAATATATGCAGCAAAGGTGCTGTGAGCCC...AGTTCTCCTGTGGCAGTGGCGATGTGGCATCCAGAGGGCCATTGTTTCTACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR CAA 90 bp AAACAATGGCCCTCTGGATGCCACATCGCCACTGCCACAGGAGAACTGTCTTTTGTGCAGCAACTGTGTTaGAGTGTTGTGGTCTACACA +
Preference number: 3 (lower is better)
Translates to: KQWPSGCHIATATGELSFVQQLC*SVVVYT
Trigger: TGTGTAGACCACAACACTCAAACACAGTTGCTGCAC...AAAAGACAGTTCTCCTGTGGCAGTGGCGATGTGGCATCCAGAGGGCCATTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR TCA 72 bp ATCAGAGTTCACTCTGCACAAACAAGATCAGAACACTaGATACGTGGGTTTGGCGAAGGAGTGGGCAGTGGG +
Preference number: 3 (lower is better)
Translates to: IRVHSAQTRSEH*IRGFGEGVGSG
Trigger: CCCACTGCCCACTCCTTCGCCAAACCCACGTATTCAGTGTTCTGATCTTGTTTGTGCAGAGTGAACTCTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR GCA 72 bp TCCTCTGCACTGGAACACAGTGGGGGAAACGTTCCCTaGTTATGCCTATGTTACTTAGTGGAACCTAAGGTG +
Preference number: 3 (lower is better)
Translates to: SSALEHSGGNVP*LCLCYLVEPKV
Trigger: CACCTTAGGTTCCACTAAGTAACATAGGCATAAGCAGGGAACGTTTCCCCCACTGTGTTCCAGTGCAGAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR GCA 72 bp ACCTTCGTTTGCTTCTGTAGGTGCTCCACCCATTCCTaGAGATCCTGCTGGTTGTTGCACGACACTAATATC +
Preference number: 3 (lower is better)
Translates to: TFVCFCRCSTHS*RSCWLLHDTNI
Trigger: GATATTAGTGTCGTGCAACAACCAGCAGGATCTGCAGGAATGGGTGGAGCACCTACAGAAGCAAACGAAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469877.5
3UTR CCA 72 bp TTCTGTAGGTGCTCCACCCATTCCTGCAGATCCTGCTaGTTGTTGCACGACACTAATATCCGCTCAATCATG +
Preference number: 3 (lower is better)
Translates to: FCRCSTHSCRSC*LLHDTNIRSIM
Trigger: CATGATTGAGCGGATATTAGTGTCGTGCAACAACCAGCAGGATCTGCAGGAATGGGTGGAGCACCTACAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469877.5
3UTR-3UTR CAA 90 bp AGGGGAAGGGCTGTTAAAAACACAAGTATTCTTGTGAAATACTTCGATCTGAGCCTGTCAGCCAGCAAGTaGCCCTCAGAAACCCGCAGG +
Preference number: 3 (lower is better)
Translates to: RGRAVKNTSILVKYFDLSLSASK*PSETRR
Trigger: CCTGCGGGTTTCTGAGGGCAACTTGCTGGCTGACAG...GCTCAGATCGAAGTATTTCACAAGAATACTTGTGTTTTTAACAGCCCTTCCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR TCA 72 bp GATAAGAAATGGCTTCATCTCCTCATCCATACAAGGTaGGAGCAAAGGAGTAACCCTCGGGCAAATCGTGGC +
Preference number: 3 (lower is better)
Translates to: DKKWLHLLIHTR*EQRSNPRANRG
Trigger: GCCACGATTTGCCCGAGGGTTACTCCTTTGCTCTCACCTTGTATGGATGAGGAGATGAAGCCATTTCTTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR TCA 72 bp ATCCTGTGTTCCGTGAGGACATTCACTGCAGAAGGGTaGTTGGCACAATACGTGAGGTACAGGGTTTTCATC +
Preference number: 3 (lower is better)
Translates to: ILCSVRTFTAEG*LAQYVRYRVFI
Trigger: GATGAAAACCCTGTACCTCACGTATTGTGCCAATCACCCTTCTGCAGTGAATGTCCTCACGGAACACAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469877.5
3UTR CCA 72 bp TGTTCTGCACGATTACCAGAACACAGCCGTTGGAACTaGGCTCACAGCACCTTTGCTGCATATATTCTTCTC +
Preference number: 3 (lower is better)
Translates to: CSARLPEHSRWN*AHSTFAAYILL
Trigger: GAGAAGAATATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR CCA 72 bp ACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTaGAACTGGGCTCACAGCACCTTTGCTGCATATATT +
Preference number: 3 (lower is better)
Translates to: TCCSARLPEHSR*NWAHSTFAAYI
Trigger: AATATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR CAA 90 bp CATCTGAGAATCACAGTACTCAGACAGCGGACAAGAGCAAACACCTCTAGGTGGTTCATCAGTCATGGTTaGATCGTCTCCATTCGCAGA +
Preference number: 3 (lower is better)
Translates to: HLRITVLRQRTRANTSRWFISHG*IVSIRR
Trigger: TCTGCGAATGGAGACGATCAAACCATGACTGATGAA...CCACCTAGAGGTGTTTGCTCTTGTCCGCTGTCTGAGTACTGTGATTCTCAGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CAA 90 bp GTGTATTTTGTTGTTACTGAACTAGCCTATACAGAACCGTCTGTGTCCTCCCAACCGTATGGGCCTTCCTaGAGGTCAAGACTGAGTCTG +
Preference number: 3 (lower is better)
Translates to: VYFVVTELAYTEPSVSSQPYGPS*RSRLSL
Trigger: CAGACTCAGTCTTGACCTCAAGGAAGGCCCATACGG...TTGGGAGGACACAGACGGTTCTGTATAGGCTAGTTCAGTAACAACAAAATACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CAA 90 bp GTGGGGAAGAAAGAAATCACGGCCACCTGGAATTACAGCCACCCTGAAGAAGGATCTCTCCACAACTACTaGATCAGTGTTCATAGCACT +
Preference number: 3 (lower is better)
Translates to: VGKKEITATWNYSHPEEGSLHNY*ISVHST
Trigger: AGTGCTATGAACACTGATCAAGTAGTTGTGGAGAGA...TCCTTCTTCAGGGTGGCTGTAATTCCAGGTGGCCGTGATTTCTTTCTTCCCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR CAA 90 bp TATCAAGTTCCCACCCCCTTGGGAGGTCACACGGTGAAACAGACACAGTTATATTTCATCAGTCATGGTTaGATCGTCTCCATTCGCAGA +
Preference number: 3 (lower is better)
Translates to: YQVPTPLGGHTVKQTQLYFISHG*IVSIRR
Trigger: TCTGCGAATGGAGACGATCAAACCATGACTGATGAA...ATATAACTGTGTCTGTTTCACCGTGTGACCTCCCAAGGGGGTGGGAACTTGATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CAA 90 bp GGACATGTAAGTGACGTTGCCCAGAGTTTTAATGTCATCGCCCTCCCAGTTCCGGGCAGCCATGGATTTTaGAATATCTTGTCTATCTGT +
Preference number: 3 (lower is better)
Translates to: GHVSDVAQSFNVIALPVPGSHGF*NILSIC
Trigger: ACAGATAGACAAGATATTCAAAAATCCATGGCTGCC...CGGAACTGGGAGGGCGATGACATTAAAACTCTGGGCAACGTCACTTACATGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469877.5
3UTR TCA 72 bp TATATCAAGTTCCCACCCCCTTGGGAGGTCACACGGTaGAACAGACACAGTTATATACAACAGGGCAGGTTT +
Preference number: 3 (lower is better)
Translates to: YIKFPPPWEVTR*NRHSYIQQGRF
Trigger: AAACCTGCCCTGTTGTATATAACTGTGTCTGTTTCACCGTGTGACCTCCCAAGGGGGTGGGAACTTGATATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR TCA 72 bp AGCACAGACGCCACTGAGTGTGAAGGAACGAGCTTCTaGTGCTACATTCCAACATCGCTGAAAACTGAAAGT +
Preference number: 3 (lower is better)
Translates to: STDATECEGTSF*CYIPTSLKTES
Trigger: ACTTTCAGTTTTCAGCGATGTTGGAATGTAGCATCAGAAGCTCGTTCCTTCACACTCAGTGGCGTCTGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR TCA 72 bp GGACATTCACTGCAGAAGGGTGATTGGCACAATACGTaGGGTACAGGGTTTTCATCTGTGGCATCAGGTTTA +
Preference number: 3 (lower is better)
Translates to: GHSLQKGDWHNT*GTGFSSVASGL
Trigger: TAAACCTGATGCCACAGATGAAAACCCTGTACCTCACGTATTGTGCCAATCACCCTTCTGCAGTGAATGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469877.5
3UTR GCA 72 bp AAGAACCGTAAACAGCAACACAACACTCTCCCAAGGTaGCCAGCTCAAAGGCATCAGTACACAAAGGATTCA +
Preference number: 3 (lower is better)
Translates to: KNRKQQHNTLPR*PAQRHQYTKDS
Trigger: TGAATCCTTTGTGTACTGATGCCTTTGAGCTGGGCACCTTGGGAGAGTGTTGTGTTGCTGTTTACGGTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR CCA 72 bp TCAGAGTCAATCCCTCCTGTCTGGATTCATCAGTCATaGTTTGATCGTCTCCATTCGCAGAATAAGCTCCAG +
Preference number: 3 (lower is better)
Translates to: SESIPPVWIHQS*FDRLHSQNKLQ
Trigger: CTGGAGCTTATTCTGCGAATGGAGACGATCAAACCATGACTGATGAATCCAGACAGGAGGGATTGACTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CAA 90 bp TATCAAGTTCCCACCCCCTTGGGAGGTCACACGGTGAAACAGACACAGTTATATGGTCACCCTTATTTATaGCTGAAGCAGAACGAAAAC +
Preference number: 3 (lower is better)
Translates to: YQVPTPLGGHTVKQTQLYGHPYL*LKQNEN
Trigger: GTTTTCGTTCTGCTTCAGCAATAAATAAGGGTGACC...ATATAACTGTGTCTGTTTCACCGTGTGACCTCCCAAGGGGGTGGGAACTTGATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CAA 90 bp AAACAATGGCCCTCTGGATGCCACATCGCCACTGCCACAGGAGAACTGTCTTTTCGATACAACAAGCATTaGTTAAGAAAAGCTCAGAAG +
Preference number: 3 (lower is better)
Translates to: KQWPSGCHIATATGELSFRYNKH*LRKAQK
Trigger: CTTCTGAGCTTTTCTTAACAAATGCTTGTTGTATCG...AAAAGACAGTTCTCCTGTGGCAGTGGCGATGTGGCATCCAGAGGGCCATTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR CAA 90 bp CGATTACCAGAACACAGCCGTTGGAACTGGGCTCACAGCACCTTTGCTGCATATCGATACAACAAGCATTaGTTAAGAAAAGCTCAGAAG +
Preference number: 3 (lower is better)
Translates to: RLPEHSRWNWAHSTFAAYRYNKH*LRKAQK
Trigger: CTTCTGAGCTTTTCTTAACAAATGCTTGTTGTATCG...ATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR CAA 90 bp GTGGGGAAGAAAGAAATCACGGCCACCTGGAATTACAGCCACCCTGAAGAAGGAATTTACTATGGCATCTaGTTTTCTGAAGCTGGTTTC +
Preference number: 3 (lower is better)
Translates to: VGKKEITATWNYSHPEEGIYYGI*FSEAGF
Trigger: GAAACCAGCTTCAGAAAACAAGATGCCATAGTAAAT...TCCTTCTTCAGGGTGGCTGTAATTCCAGGTGGCCGTGATTTCTTTCTTCCCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR CAA 90 bp AAACAATGGCCCTCTGGATGCCACATCGCCACTGCCACAGGAGAACTGTCTTTTCAGTTCAGTAGCTACTaGGGAACAAATATTTGGAAT +
Preference number: 3 (lower is better)
Translates to: KQWPSGCHIATATGELSFQFSSY*GTNIWN
Trigger: ATTCCAAATATTTGTTCCCAAGTAGCTACTGAACTG...AAAAGACAGTTCTCCTGTGGCAGTGGCGATGTGGCATCCAGAGGGCCATTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR TCA 72 bp GGTATTAAAGGAAAATCCAAGTGCAGCAACTGTGTTTaGGTGTTGTGGTCTACACAGCCCATGACACAGGCA +
Preference number: 3 (lower is better)
Translates to: GIKGKSKCSNCV*VLWSTQPMTQA
Trigger: TGCCTGTGTCATGGGCTGTGTAGACCACAACACTCAAACACAGTTGCTGCACTTGGATTTTCCTTTAATACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR GCA 72 bp GCACTGGAACACAGTGGGGGAAACGTTCCCTGCTTATaGCTATGTTACTTAGTGGAACCTAAGGTGTATATT +
Preference number: 3 (lower is better)
Translates to: ALEHSGGNVPCL*LCYLVEPKVYI
Trigger: AATATACACCTTAGGTTCCACTAAGTAACATAGGCATAAGCAGGGAACGTTTCCCCCACTGTGTTCCAGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR GCA 72 bp GTACAGGCTTGCTATGTGCCTTATAACAGAAATCACTaGAATTCAGGGAAGTTTGGGGTGAAGATGCGAGTG +
Preference number: 3 (lower is better)
Translates to: VQACYVPYNRNH*NSGKFGVKMRV
Trigger: CACTCGCATCTTCACCCCAAACTTCCCTGAATTGCAGTGATTTCTGTTATAAGGCACATAGCAAGCCTGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR CAA 90 bp GCTTGTTCCATGCTGAATGAAGCCACCCAACTTTCTAAACAACGTGCTACTGCCCATTACAATGAGGCATaGTGGTTTTATACTATGGGG +
Preference number: 3 (lower is better)
Translates to: ACSMLNEATQLSKQRATAHYNEA*WFYTMG
Trigger: CCCCATAGTATAAAACCACAATGCCTCATTGTAATG...GGCAGTAGCACGTTGTTTAGAAAGTTGGGTGGCTTCATTCAGCATGGAACAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR TCA 72 bp AAAGTGTTGATCTTTGCTTGTGCCCGCATGAGTGAATaGTCTGCTAAGTTGAGGAAGCTGGCAATTCTAGTG +
Preference number: 3 (lower is better)
Translates to: KVLIFACARMSE*SAKLRKLAILV
Trigger: CACTAGAATTGCCAGCTTCCTCAACTTAGCAGATCATTCACTCATGCGGGCACAAGCAAAGATCAACACTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CAA 90 bp CCTCTACTACAGTCCAGTAGTCTACACTTGCAGAGGCTGAATGCTTCAGCTTTCCGATACAACAAGCATTaGTTAAGAAAAGCTCAGAAG +
Preference number: 3 (lower is better)
Translates to: PLLQSSSLHLQRLNASAFRYNKH*LRKAQK
Trigger: CTTCTGAGCTTTTCTTAACAAATGCTTGTTGTATCG...GAAAGCTGAAGCATTCAGCCTCTGCAAGTGTAGACTACTGGACTGTAGTAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR CAA 90 bp GCTTGTTCCATGCTGAATGAAGCCACCCAACTTTCTAAACAACGTGCTACTGCCATTTACTATGGCATCTaGTTTTCTGAAGCTGGTTTC +
Preference number: 3 (lower is better)
Translates to: ACSMLNEATQLSKQRATAIYYGI*FSEAGF
Trigger: GAAACCAGCTTCAGAAAACAAGATGCCATAGTAAAT...GGCAGTAGCACGTTGTTTAGAAAGTTGGGTGGCTTCATTCAGCATGGAACAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR TCA 72 bp GGTCACATTCAGTGCTTTTTGAAGCAGAAATTGGTCTaGGTGAGGCCAGTGAAAACTCCTTACAACAAATCC +
Preference number: 3 (lower is better)
Translates to: GHIQCFLKQKLV*VRPVKTPYNKS
Trigger: GGATTTGTTGTAAGGAGTTTTCACTGGCCTCACTCAGACCAATTTCTGCTTCAAAAAGCACTGAATGTGACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR GCA 72 bp GTAGCTACTTGGGAACAAATATTTGGAATTAACAGCTaGCCTGATGTCTCCTGTGCCATTAGCTTGTTCCAT +
Preference number: 3 (lower is better)
Translates to: VATWEQIFGINS*PDVSCAISLFH
Trigger: ATGGAACAAGCTAATGGCACAGGAGACATCAGGGCAGCTGTTAATTCCAAATATTTGTTCCCAAGTAGCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR CAA 90 bp GAAATTGGTCTGAGTGAGGCCAGTGAAAACTCCTTACAACAAATCCCAGGAAAATCTCTCCACAACTACTaGATCAGTGTTCATAGCACT +
Preference number: 3 (lower is better)
Translates to: EIGLSEASENSLQQIPGKSLHNY*ISVHST
Trigger: AGTGCTATGAACACTGATCAAGTAGTTGTGGAGAGA...TTTTCCTGGGATTTGTTGTAAGGAGTTTTCACTGGCCTCACTCAGACCAATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR TCA 72 bp GTCTGGGACTGTAATGCTGCTTTAAGAGAAGACTTCTaGATGGGACTGAAGTGTATCTCTGCAGGTATAAAT +
Preference number: 3 (lower is better)
Translates to: VWDCNAALREDF*MGLKCISAGIN
Trigger: ATTTATACCTGCAGAGATACACTTCAGTCCCATTCAGAAGTCTTCTCTTAAAGCAGCATTACAGTCCCAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR TCA 72 bp TTTGAGGGAAGACAAAACAGTGTATTTTGTTGTTACTaGACTAGCCTATACAGAACCGTCTGTGTCCTCCCA +
Preference number: 3 (lower is better)
Translates to: FEGRQNSVFCCY*TSLYRTVCVLP
Trigger: TGGGAGGACACAGACGGTTCTGTATAGGCTAGTTCAGTAACAACAAAATACACTGTTTTGTCTTCCCTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR CCA 72 bp TATCCCATTACAATGAGGCATTGTGGTTTTATACTATaGGGTTGCTGTAAATGGAGTTTCACTGCAGCTGGT +
Preference number: 3 (lower is better)
Translates to: YPITMRHCGFIL*GCCKWSFTAAG
Trigger: ACCAGCTGCAGTGAAACTCCATTTACAGCAACCCCATAGTATAAAACCACAATGCCTCATTGTAATGGGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR CAA 90 bp ACGGTGAAACAGACACAGTTATATACAACAGGGCAGGTTTTTAAAAAGAGTTGCGGTCACCCTTATTTATaGCTGAAGCAGAACGAAAAC +
Preference number: 3 (lower is better)
Translates to: TVKQTQLYTTGQVFKKSCGHPYL*LKQNEN
Trigger: GTTTTCGTTCTGCTTCAGCAATAAATAAGGGTGACC...GCAACTCTTTTTAAAAACCTGCCCTGTTGTATATAACTGTGTCTGTTTCACCGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR TCA 72 bp ATTTGGCCAATAGACAGAAAATCAGAGAGTCAAATCTaGTGCGCAATGAGTTGTTCTGAGACCAGTAATCCA +
Preference number: 3 (lower is better)
Translates to: IWPIDRKSESQI*CAMSCSETSNP
Trigger: TGGATTACTGGTCTCAGAACAACTCATTGCGCATCAGATTTGACTCTCTGATTTTCTGTCTATTGGCCAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR GCA 72 bp AGAGATTTTACTGTAGAGTGGTACAGGCTTGCTATGTaGCTTATAACAGAAATCACTGCAATTCAGGGAAGT +
Preference number: 3 (lower is better)
Translates to: RDFTVEWYRLAM*LITEITAIQGS
Trigger: ACTTCCCTGAATTGCAGTGATTTCTGTTATAAGGCACATAGCAAGCCTGTACCACTCTACAGTAAAATCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR CCA 72 bp TTTTCACAGGAAAGGAAACCAAAAGCAAAGTCCCTGTaGTCACCCTTATTTATTGCTGAAGCAGAACGAAAA +
Preference number: 3 (lower is better)
Translates to: FSQERKPKAKSL*SPLFIAEAERK
Trigger: TTTTCGTTCTGCTTCAGCAATAAATAAGGGTGACCACAGGGACTTTGCTTTTGGTTTCCTTTCCTGTGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR CCA 72 bp GTTGTTCTGAGACCAGTAATCCACGGTGCTGCAATTTaGGTTTTTAAAGATAGAACACTTGTTCTACGGAAA +
Preference number: 3 (lower is better)
Translates to: VVLRPVIHGAAI*VFKDRTLVLRK
Trigger: TTTCCGTAGAACAAGTGTTCTATCTTTAAAAACCCAAATTGCAGCACCGTGGATTACTGGTCTCAGAACAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR TCA 72 bp AATTGTATGAACAGAAGATTCTATTATCAGCATGACTaGAGTCCCACAAAAGTAGAAACAATGGCCCTCTGG +
Preference number: 3 (lower is better)
Translates to: NCMNRRFYYQHD*SPTKVETMALW
Trigger: CCAGAGGGCCATTGTTTCTACTTTTGTGGGACTTCAGTCATGCTGATAATAGAATCTTCTGTTCATACAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR TCA 72 bp ACAGAATTGTATGAACAGAAGATTCTATTATCAGCATaGCTGAAGTCCCACAAAAGTAGAAACAATGGCCCT +
Preference number: 3 (lower is better)
Translates to: TELYEQKILLSA*LKSHKSRNNGP
Trigger: AGGGCCATTGTTTCTACTTTTGTGGGACTTCAGTCATGCTGATAATAGAATCTTCTGTTCATACAATTCTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR CAA 72 bp GCGGGCGTCAGCGGCGCGGGCTTGCTGTCTGCGTGCTaGCTGGACGGAGTGACCGGGTGGGAGGGGAGGGTA +
Preference number: 4 (lower is better)
Translates to: AGVSGAGLLSAC*LDGVTGWEGRV
Trigger: TACCCTCCCCTCCCACCCGGTCACTCCGTCCAGCAAGCACGCAGACAGCAAGCCCGCGCCGCTGACGCCCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR TCA 90 bp GTGGGAGGGGTGGGGCAGCGTGTGGTAGGCGGGCGTCAGCGGCGCGGGCTTGCTGTGCCTCCACCTTCATaGGCACTGCTTTCCGCTCCG +
Preference number: 4 (lower is better)
Translates to: VGGVGQRVVGGRQRRGLAVPPPS*ALLSAP
Trigger: CGGAGCGGAAAGCAGTGCTCATGAAGGTGGAGGCAC...AGCAAGCCCGCGCCGCTGACGCCCGCCTACCACACGCTGCCCCACCCCTCCCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR GCA 90 bp GTGGGAGGGGTGGGGCAGCGTGTGGTAGGCGGGCGTCAGCGGCGCGGGCTTGCTCCGGTTCCACCTCCATaGAGTCTCTGGGTGTGCCTC +
Preference number: 4 (lower is better)
Translates to: VGGVGQRVVGGRQRRGLAPVPPP*SLWVCL
Trigger: GAGGCACACCCAGAGACTGCATGGAGGTGGAACCGG...AGCAAGCCCGCGCCGCTGACGCCCGCCTACCACACGCTGCCCCACCCCTCCCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR GCA 90 bp CGTCAGCGGCGCGGGCTTGCTGTCTGCGTGCTTGCTGGACGGAGTGACCGGGTGCCTCGCGCACGTAGTTaGTGGGGAACCAGCCGGTCC +
Preference number: 4 (lower is better)
Translates to: RQRRGLAVCVLAGRSDRVPRARS*WGTSRS
Trigger: GGACCGGCTGGTTCCCCAGCAACTACGTGCGCGAGG...CACCCGGTCACTCCGTCCAGCAAGCACGCAGACAGCAAGCCCGCGCCGCTGACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR GCA 90 bp TGTGGTAGGCGGGCGTCAGCGGCGCGGGCTTGCTGTCTGCGTGCTTGCTGGACGTCAGCGGCGCGGGCTTaGTGTCTGCGTGCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: CGRRASAARACCLRACWTSAARA*CLRACW
Trigger: CCAGCAAGCACGCAGACAGCAAGCCCGCGCCGCTGA...CGTCCAGCAAGCACGCAGACAGCAAGCCCGCGCCGCTGACGCCCGCCTACCACA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR TCA 90 bp AAAACCTGCTCCACGGGCCGGGCTTCCTGCCCAGGACCGCACAGGCTTTCCAGAGCTTGCTGGACGGAGTaGCCGGGTGGGAGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: KTCSTGRASCPGPHRLSRACWTE*PGGRGG
Trigger: CCCTCCCCTCCCACCCGGTCACTCCGTCCAGCAAGC...TCTGGAAAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGTGGAGCAGGTTTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp AAAACCTGCTCCACGGGCCGGGCTTCCTGCCCAGGACCGCACAGGCTTTCCAGACTGGAGCGAGCCCGCTaGCCCAGATGCCAACCCGCT +
Preference number: 4 (lower is better)
Translates to: KTCSTGRASCPGPHRLSRLERAR*PRCQPA
Trigger: AGCGGGTTGGCATCTGGGGCAGCGGGCTCGCTCCAG...TCTGGAAAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGTGGAGCAGGTTTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218789.9
ENST00000375736.8
CDS-3UTR GCA 90 bp CGTGTGGTAGGCGGGCGTCAGCGGCGCGGGCTTGCTGTCTGCGTGCTTGCTGGAGGCTTGCTGTCTGCGTaGTTGCTGGACGGAGTGACC +
Preference number: 4 (lower is better)
Translates to: RVVGGRQRRGLAVCVLAGGLLSA*LLDGVT
Trigger: GGTCACTCCGTCCAGCAAGCACGCAGACAGCAAGCC...TCCAGCAAGCACGCAGACAGCAAGCCCGCGCCGCTGACGCCCGCCTACCACACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR TCA 90 bp GCGGCAGTGCCGTATGGGCCTTCCTTGAGGTCAAGACTGAGTCTGTCAGCCAGCACAGAGCACAAGCGCTaGGCGCCGTGGCCGGCAGCG +
Preference number: 4 (lower is better)
Translates to: AAVPYGPSLRSRLSLSASTEHKR*APWPAA
Trigger: CGCTGCCGGCCACGGCGCTCAGCGCTTGTGCTCTGT...GCTGGCTGACAGACTCAGTCTTGACCTCAAGGAAGGCCCATACGGCACTGCCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218789.9
ENST00000375736.8
CDS-3UTR TCA 90 bp GTGGGAGGGGTGGGGCAGCGTGTGGTAGGCGGGCGTCAGCGGCGCGGGCTTGCTGGTATGAGATGGCACTaGATGAGGCTTTATGGTGGG +
Preference number: 4 (lower is better)
Translates to: VGGVGQRVVGGRQRRGLAGMRWH*MRLYGG
Trigger: CCCACCATAAAGCCTCATTCAGTGCCATCTCATACC...AGCAAGCCCGCGCCGCTGACGCCCGCCTACCACACGCTGCCCCACCCCTCCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR TCA 90 bp CAGCACGGTGGAGGCCCTGGTGCTGCGGAACGAACCAGGCATCCACCAGGCTTCGGCAATGCCGTAACATaGGGCCCTCATGGCCGCACC +
Preference number: 4 (lower is better)
Translates to: QHGGGPGAAERTRHPPGFGNAVT*GPHGRT
Trigger: GGTGCGGCCATGAGGGCCTCATGTTACGGCATTGCC...GAAGCCTGGTGGATGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCACCGTGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp ACGGTGGAGGCCCTGGTGCTGCGGAACGAACCAGGCATCCACCAGGCTTCTGCTTCAGCGGCGCGGGCTTaGTGTCTGCGTGCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: TVEALVLRNEPGIHQASASAARA*CLRACW
Trigger: CCAGCAAGCACGCAGACAGCAAGCCCGCGCCGCTGA...AGCAGAAGCCTGGTGGATGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCACCGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp GCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGCACGGCGCTCCAGCAGCCTaGAGAGGACCACCCCATCCT +
Preference number: 4 (lower is better)
Translates to: AVRWRQALNTRDARPSVHGAPAA*RGPPHP
Trigger: AGGATGGGGTGGTCCTCTGCAGGCTGCTGGAGCGCC...GTGCACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317133.9
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp AGAGCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGCGCGCACGTAGTTGCTaGGGAACCAGCCGGTCCGGC +
Preference number: 4 (lower is better)
Translates to: RAVRWRQALNTRDARPSVRARSC*GTSRSG
Trigger: GCCGGACCGGCTGGTTCCCCAGCAACTACGTGCGCG...CACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGCTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp CTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGAGCCGGTCCGGCCGTTaGGTGTGCCCTCCCACCAGC +
Preference number: 4 (lower is better)
Translates to: LPRPRAHMLFCTITRTQPSRSGR*VCPPTS
Trigger: GCTGGTGGGAGGGCACACTCAACGGCCGGACCGGCT...CGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp AACGAAAACCTGCTCCACGGGCCGGGCTTCCTGCCCAGGACCGCACAGGCTTTCGCTTCTCGCTGGCCTTaGCCTCGCGCACGTAGTTGC +
Preference number: 4 (lower is better)
Translates to: NENLLHGPGFLPRTAQAFASRWP*PRARSC
Trigger: GCAACTACGTGCGCGAGGTCAAGGCCAGCGAGAAGC...GAAAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGTGGAGCAGGTTTTCGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp ACGCCCAGCGCATGTGGACAAGCACAGACGCCACTGAGTGTGAAGGAACGAGCTGCTTGCTGGACGGAGTaGCCGGGTGGGAGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: TPSACGQAQTPLSVKERAACWTE*PGGRGG
Trigger: CCCTCCCCTCCCACCCGGTCACTCCGTCCAGCAAGC...AGCTCGTTCCTTCACACTCAGTGGCGTCTGTGCTTGTCCACATGCGCTGGGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp CTTTCGGTGAGCACTGAAGCCTGCTGGCTACGGCCAATGGTGGAGGAGACCTCGCCCAGCGAGCCGCGGTaGGGACAGGCTTCGTCTCCT +
Preference number: 4 (lower is better)
Translates to: LSVSTEACWLRPMVEETSPSEPR*GQASSP
Trigger: AGGAGACGAAGCCTGTCCTCACCGCGGCTCGCTGGG...CGAGGTCTCCTCCACCATTGGCCGTAGCCAGCAGGCTTCAGTGCTCACCGAAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp GCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGCACAGCTCTGAACACACGTaGCGCCCGCCCGTCTGTGCA +
Preference number: 4 (lower is better)
Translates to: AVRWRQALNTRDARPSVHSSEHT*RPPVCA
Trigger: TGCACAGACGGGCGGGCGTCACGTGTGTTCAGAGCT...GTGCACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp AGAGCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGCCTCGCGCACGTAGTTaGTGGGGAACCAGCCGGTCC +
Preference number: 4 (lower is better)
Translates to: RAVRWRQALNTRDARPSVPRARS*WGTSRS
Trigger: GGACCGGCTGGTTCCCCAGCAACTACGTGCGCGAGG...CACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp ACGGTGGAGGCCCTGGTGCTGCGGAACGAACCAGGCATCCACCAGGCTTCTGCTCCCTGTGGTCCTGAGTaGACCCCGACTTGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: TVEALVLRNEPGIHQASAPCGPE*TPTWVR
Trigger: CCTGACCCAAGTCGGGGTGCACTCAGGACCACAGGG...AGCAGAAGCCTGGTGGATGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCACCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp AACGAAAACCTGCTCCACGGGCCGGGCTTCCTGCCCAGGACCGCACAGGCTTTCCCCTGTGGTCCTGAGTaGACCCCGACTTGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: NENLLHGPGFLPRTAQAFPCGPE*TPTWVR
Trigger: CCTGACCCAAGTCGGGGTGCACTCAGGACCACAGGG...GAAAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGTGGAGCAGGTTTTCGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp AAAACCTGCTCCACGGGCCGGGCTTCCTGCCCAGGACCGCACAGGCTTTCCAGATGGAGGCCCTGGTGCTaGGGAACGAACCAGGCATCC +
Preference number: 4 (lower is better)
Translates to: KTCSTGRASCPGPHRLSRWRPWC*GTNQAS
Trigger: GGATGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCA...TCTGGAAAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGTGGAGCAGGTTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp CAGCACGGTGGAGGCCCTGGTGCTGCGGAACGAACCAGGCATCCACCAGGCTTCGCTGGCTACGGCCAATaGTGGAGGAGACCTCGGGAT +
Preference number: 4 (lower is better)
Translates to: QHGGGPGAAERTRHPPGFAGYGQ*WRRPRD
Trigger: ATCCCGAGGTCTCCTCCACCATTGGCCGTAGCCAGC...GAAGCCTGGTGGATGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCACCGTGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp CTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGCGGCGTGGCCTGAAGTaGGGCTGTGCAGAGGGCCGG +
Preference number: 4 (lower is better)
Translates to: LPRPRAHMLFCTITRTQPRRGLK*GCAEGR
Trigger: CCGGCCCTCTGCACAGCCCCACTTCAGGCCACGCCG...CGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317133.9
CDS-3UTR TCA 90 bp ACCTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCGCTTGCTGGACGGAGTaGCCGGGTGGGAGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: TCQGPEPTCCSARLPEHSACWTE*PGGRGG
Trigger: CCCTCCCCTCCCACCCGGTCACTCCGTCCAGCAAGC...GCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp AAAACCTGCTCCACGGGCCGGGCTTCCTGCCCAGGACCGCACAGGCTTTCCAGACCCAGGCAGACAACGTaGCCAGTCACGGAAGGAAGC +
Preference number: 4 (lower is better)
Translates to: KTCSTGRASCPGPHRLSRPRQTT*PVTEGS
Trigger: GCTTCCTTCCGTGACTGGTCACGTTGTCTGCCTGGG...TCTGGAAAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGTGGAGCAGGTTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp GCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGCACGGTCTACACAGCCCATaGCACAGGCAACCCACGCCT +
Preference number: 4 (lower is better)
Translates to: AVRWRQALNTRDARPSVHGLHSP*HRQPTP
Trigger: AGGCGTGGGTTGCCTGTGTCATGGGCTGTGTAGACC...GTGCACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp AAAACCTGCTCCACGGGCCGGGCTTCCTGCCCAGGACCGCACAGGCTTTCCAGAGGCTTGCTGTCTGCGTaGTTGCTGGACGGAGTGACC +
Preference number: 4 (lower is better)
Translates to: KTCSTGRASCPGPHRLSRGLLSA*LLDGVT
Trigger: GGTCACTCCGTCCAGCAAGCACGCAGACAGCAAGCC...TCTGGAAAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGTGGAGCAGGTTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp TGTGGTCCTGAGTGCACCCCGACTTGGGTCAGGGGTGCCCAGCTTCACCTCAGACGCGGGCTTGCTGTCTaGGTGCTTGCTGGACGGAGT +
Preference number: 4 (lower is better)
Translates to: CGPECTPTWVRGAQLHLRRGLAV*VLAGRS
Trigger: ACTCCGTCCAGCAAGCACGCAGACAGCAAGCCCGCG...TCTGAGGTGAAGCTGGGCACCCCTGACCCAAGTCGGGGTGCACTCAGGACCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp TGTGGTCCTGAGTGCACCCCGACTTGGGTCAGGGGTGCCCAGCTTCACCTCAGAGGTGAGGCCAGGTTCTaGAGCATGGGGCAGGTCCAC +
Preference number: 4 (lower is better)
Translates to: CGPECTPTWVRGAQLHLRGEARF*SMGQVH
Trigger: GTGGACCTGCCCCATGCTGCAGAACCTGGCCTCACC...TCTGAGGTGAAGCTGGGCACCCCTGACCCAAGTCGGGGTGCACTCAGGACCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp TGTGGTAGGCGGGCGTCAGCGGCGCGGGCTTGCTGTCTGCGTGCTTGCTGGACGGCTCCCAAATGTGTCTaGTGGCAGGCATGCCTTTCA +
Preference number: 4 (lower is better)
Translates to: CGRRASAARACCLRACWTAPKCV*WQACLS
Trigger: TGAAAGGCATGCCTGCCAGCAGACACATTTGGGAGC...CGTCCAGCAAGCACGCAGACAGCAAGCCCGCGCCGCTGACGCCCGCCTACCACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR CCA 90 bp CAGCACGGTGGAGGCCCTGGTGCTGCGGAACGAACCAGGCATCCACCAGGCTTCTCAGGCTCCAGGGCTTaGGTGTTTTCGGAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: QHGGGPGAAERTRHPPGFSGSRA*VFSEAP
Trigger: TGGAGCCTCCGAAAACACCCAAGCCCTGGAGCCTGA...GAAGCCTGGTGGATGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCACCGTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp ACGCCCAGCGCATGTGGACAAGCACAGACGCCACTGAGTGTGAAGGAACGAGCTGCTGCCACAGCACGGTaGAGGCCCTGGTGCTGCGGA +
Preference number: 4 (lower is better)
Translates to: TPSACGQAQTPLSVKERAAATAR*RPWCCG
Trigger: TCCGCAGCACCAGGGCCTCCACCGTGCTGTGGCAGC...AGCTCGTTCCTTCACACTCAGTGGCGTCTGTGCTTGTCCACATGCGCTGGGCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp CAGCACGGTGGAGGCCCTGGTGCTGCGGAACGAACCAGGCATCCACCAGGCTTCTGCGGCAGTGCCGTATaGGCCTTCCTTGAGGTCAAG +
Preference number: 4 (lower is better)
Translates to: QHGGGPGAAERTRHPPGFCGSAV*AFLEVK
Trigger: CTTGACCTCAAGGAAGGCCCATACGGCACTGCCGCA...GAAGCCTGGTGGATGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCACCGTGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp AAAACCTGCTCCACGGGCCGGGCTTCCTGCCCAGGACCGCACAGGCTTTCCAGAGGCTACGGCCAATGGTaGAGGAGACCTCGGGATGAG +
Preference number: 4 (lower is better)
Translates to: KTCSTGRASCPGPHRLSRGYGQW*RRPRDE
Trigger: CTCATCCCGAGGTCTCCTCCACCATTGGCCGTAGCC...TCTGGAAAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGTGGAGCAGGTTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp ACGGTGGAGGCCCTGGTGCTGCGGAACGAACCAGGCATCCACCAGGCTTCTGCTGACGCCCAGCGCATGTaGACAAGCACAGACGCCACT +
Preference number: 4 (lower is better)
Translates to: TVEALVLRNEPGIHQASADAQRM*TSTDAT
Trigger: AGTGGCGTCTGTGCTTGTCCACATGCGCTGGGCGTC...AGCAGAAGCCTGGTGGATGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCACCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp AGAGCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGGCTCCCTGGCAGCTCTaGGCTTGTGAGCAGCAGGAC +
Preference number: 4 (lower is better)
Translates to: RAVRWRQALNTRDARPSVAPWQL*ACEQQD
Trigger: GTCCTGCTGCTCACAAGCCCAGAGCTGCCAGGGAGC...CACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGCTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp AGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAAAGCCGGTCCGGCCGTTaGGTGTGCCCTCCCACCAGC +
Preference number: 4 (lower is better)
Translates to: RPRAHMLFCTITRTQPLESRSGR*VCPPTS
Trigger: GCTGGTGGGAGGGCACACTCAACGGCCGGACCGGCT...TTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp AGAGCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGCCTCCGACTCTCTGCTaGGCTTCGGGCAACTTGGTG +
Preference number: 4 (lower is better)
Translates to: RAVRWRQALNTRDARPSVPPTLC*ASGNLV
Trigger: CACCAAGTTGCCCGAAGCTCAGCAGAGAGTCGGAGG...CACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp AGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAAGCTTGCTGGACGGAGTaGCCGGGTGGGAGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: RPRAHMLFCTITRTQPLEACWTE*PGGRGG
Trigger: CCCTCCCCTCCCACCCGGTCACTCCGTCCAGCAAGC...TTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp ACGCCCAGCGCATGTGGACAAGCACAGACGCCACTGAGTGTGAAGGAACGAGCTCCTGCCCTGTGGTCCTaGGTGCACCCCGACTTGGGT +
Preference number: 4 (lower is better)
Translates to: TPSACGQAQTPLSVKERAPALWS*VHPDLG
Trigger: ACCCAAGTCGGGGTGCACTCAGGACCACAGGGCAGG...AGCTCGTTCCTTCACACTCAGTGGCGTCTGTGCTTGTCCACATGCGCTGGGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp CTGGGGACTCGGACAGCAACGCTACCGGCTCCGAGAGGACAGTTAATGTCGCCTGGCAATGCCGTAACATaGGGCCCTCATGGCCGCACC +
Preference number: 4 (lower is better)
Translates to: LGTRTATLPAPRGQLMSPGNAVT*GPHGRT
Trigger: GGTGCGGCCATGAGGGCCTCATGTTACGGCATTGCC...AGGCGACATTAACTGTCCTCTCGGAGCCGGTAGCGTTGCTGTCCGAGTCCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp CTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGGCTCTAGACGGACGGTaGCGCTTCAGACCCTGCCGG +
Preference number: 4 (lower is better)
Translates to: LPRPRAHMLFCTITRTQPALDGR*RFRPCR
Trigger: CCGGCAGGGTCTGAAGCGTCACCGTCCGTCTAGAGC...CGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317133.9
CDS-3UTR GCA 90 bp GCGGCAGTGCCGTATGGGCCTTCCTTGAGGTCAAGACTGAGTCTGTCAGCCAGCGGTGAGGCCAGGTTCTaGAGCATGGGGCAGGTCCAC +
Preference number: 4 (lower is better)
Translates to: AAVPYGPSLRSRLSLSASGEARF*SMGQVH
Trigger: GTGGACCTGCCCCATGCTGCAGAACCTGGCCTCACC...GCTGGCTGACAGACTCAGTCTTGACCTCAAGGAAGGCCCATACGGCACTGCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp ACGGTGGAGGCCCTGGTGCTGCGGAACGAACCAGGCATCCACCAGGCTTCTGCTGCATTAAGGCAGGTCTaGAGGAGATCCGTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: TVEALVLRNEPGIHQASAALRQV*RRSVLG
Trigger: CCCCAGGACGGATCTCCTGCAGACCTGCCTTAATGC...AGCAGAAGCCTGGTGGATGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCACCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp GCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGCACGTTTGCTCAGGCCCGTaGTCAGCACGAGAATCCCAG +
Preference number: 4 (lower is better)
Translates to: AVRWRQALNTRDARPSVHVCSGP*SARESQ
Trigger: CTGGGATTCTCGTGCTGACCACGGGCCTGAGCAAAC...GTGCACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp ACGGTGGAGGCCCTGGTGCTGCGGAACGAACCAGGCATCCACCAGGCTTCTGCTGTTTGCTCAGGCCCGTaGTCAGCACGAGAATCCCAG +
Preference number: 4 (lower is better)
Translates to: TVEALVLRNEPGIHQASAVCSGP*SARESQ
Trigger: CTGGGATTCTCGTGCTGACCACGGGCCTGAGCAAAC...AGCAGAAGCCTGGTGGATGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCACCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp GCGTGTGGTAGGCGGGCGTCAGCGGCGCGGGCTTGCTGTCTGCGTGCTTGCTGGTCCTGCAGATCCTGCTaGTTGTTGCACGACACTAAT +
Preference number: 4 (lower is better)
Translates to: ACGRRASAARACCLRACWSCRSC*LLHDTN
Trigger: ATTAGTGTCGTGCAACAACCAGCAGGATCTGCAGGA...CCAGCAAGCACGCAGACAGCAAGCCCGCGCCGCTGACGCCCGCCTACCACACGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR CCA 90 bp ACGGTGGAGGCCCTGGTGCTGCGGAACGAACCAGGCATCCACCAGGCTTCTGCTTCAGGCTCCAGGGCTTaGGTGTTTTCGGAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: TVEALVLRNEPGIHQASASGSRA*VFSEAP
Trigger: TGGAGCCTCCGAAAACACCCAAGCCCTGGAGCCTGA...AGCAGAAGCCTGGTGGATGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCACCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp CTGGGGACTCGGACAGCAACGCTACCGGCTCCGAGAGGACAGTTAATGTCGCCTGCAGGAGATCCGTCCTaGGGACTCGGACAGCAACGC +
Preference number: 4 (lower is better)
Translates to: LGTRTATLPAPRGQLMSPAGDPS*GLGQQR
Trigger: GCGTTGCTGTCCGAGTCCCCAGGACGGATCTCCTGC...AGGCGACATTAACTGTCCTCTCGGAGCCGGTAGCGTTGCTGTCCGAGTCCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp GCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGCACTATGGATGTCAGGGGTaGGGAGCCGGGGGAACTGAA +
Preference number: 4 (lower is better)
Translates to: AVRWRQALNTRDARPSVHYGCQG*GAGGTE
Trigger: TTCAGTTCCCCCGGCTCCCCACCCCTGACATCCATA...GTGCACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp GCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGCACCAAACGTTTTCTCGATaGTCCCGGGGAGCAGGCGCT +
Preference number: 4 (lower is better)
Translates to: AVRWRQALNTRDARPSVHQTFSR*SRGAGA
Trigger: AGCGCCTGCTCCCCGGGACCATCGAGAAAACGTTTG...GTGCACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375739.6
CDS-3UTR TCA 90 bp CTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGGCTTCTCGCTGGCCTTaGCCTCGCGCACGTAGTTGC +
Preference number: 4 (lower is better)
Translates to: LPRPRAHMLFCTITRTQPASRWP*PRARSC
Trigger: GCAACTACGTGCGCGAGGTCAAGGCCAGCGAGAAGC...CGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp GCGGCAGTGCCGTATGGGCCTTCCTTGAGGTCAAGACTGAGTCTGTCAGCCAGCCCTCCGACTCTCTGCTaGGCTTCGGGCAACTTGGTG +
Preference number: 4 (lower is better)
Translates to: AAVPYGPSLRSRLSLSASPPTLC*ASGNLV
Trigger: CACCAAGTTGCCCGAAGCTCAGCAGAGAGTCGGAGG...GCTGGCTGACAGACTCAGTCTTGACCTCAAGGAAGGCCCATACGGCACTGCCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp ACCTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCGCCGCCGTCGCCCAATaGCATCACCGCCAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: TCQGPEPTCCSARLPEHSAAVAQ*HHRQEK
Trigger: CTTCTCCTGGCGGTGATGTCATTGGGCGACGGCGGC...GCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317133.9
CDS-3UTR TCA 90 bp TGTGGTAGGCGGGCGTCAGCGGCGCGGGCTTGCTGTCTGCGTGCTTGCTGGACGAGACCTCAGAGTTTCTaGAGGACAACAGCAACAACC +
Preference number: 4 (lower is better)
Translates to: CGRRASAARACCLRACWTRPQSF*RTTATT
Trigger: GGTTGTTGCTGTTGTCCTTCAGAAACTCTGAGGTCT...CGTCCAGCAAGCACGCAGACAGCAAGCCCGCGCCGCTGACGCCCGCCTACCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR GCA 90 bp CAGCACGGTGGAGGCCCTGGTGCTGCGGAACGAACCAGGCATCCACCAGGCTTCGCTTCCGTCAGGATCTaGAGCTCAAGCTCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: QHGGGPGAAERTRHPPGFASVRI*SSSSFL
Trigger: GAGGAAAGAGCTTGAGCTGCAGATCCTGACGGAAGC...GAAGCCTGGTGGATGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCACCGTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp CTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGCGCGGGCTTGCTGTCTaGGTGCTTGCTGGACGGAGT +
Preference number: 4 (lower is better)
Translates to: LPRPRAHMLFCTITRTQPRGLAV*VLAGRS
Trigger: ACTCCGTCCAGCAAGCACGCAGACAGCAAGCCCGCG...CGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp ACCTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCTCAGCGGCGCGGGCTTaGTGTCTGCGTGCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: TCQGPEPTCCSARLPEHSSAARA*CLRACW
Trigger: CCAGCAAGCACGCAGACAGCAAGCCCGCGCCGCTGA...GCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp GCGGCAGTGCCGTATGGGCCTTCCTTGAGGTCAAGACTGAGTCTGTCAGCCAGCAGCAGAACGAAAACCTaGTCCACGGGCCGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: AAVPYGPSLRSRLSLSASSRTKT*STGRAS
Trigger: GGAAGCCCGGCCCGTGGAGCAGGTTTTCGTTCTGCT...GCTGGCTGACAGACTCAGTCTTGACCTCAAGGAAGGCCCATACGGCACTGCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp CCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAACTGGGCTCACACGCCCGCCCGTCTGTaGACCTGCCAAGGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: PTCCSARLPEHSRWNWAHTPARL*TCQGPE
Trigger: CTCTGGGCCTTGGCAGGTGCACAGACGGGCGGGCGT...GTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp TTACGAAGAGCACCCTCGGATGTAGGCTCACGTGAACACACCACCTCCCTCCAACGCGCACGTAGTTGCTaGGGAACCAGCCGGTCCGGC +
Preference number: 4 (lower is better)
Translates to: LRRAPSDVGSREHTTSLQRARSC*GTSRSG
Trigger: GCCGGACCGGCTGGTTCCCCAGCAACTACGTGCGCG...TTGGAGGGAGGTGGTGTGTTCACGTGAGCCTACATCCGAGGGTGCTCTTCGTAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp TTTAATGTCATCGCCCTCCCAGTTCCGGATGGCTTCCGTCAGGATCTGCAGCTCCGCGCACGTAGTTGCTaGGGAACCAGCCGGTCCGGC +
Preference number: 4 (lower is better)
Translates to: FNVIALPVPDGFRQDLQLRARSC*GTSRSG
Trigger: GCCGGACCGGCTGGTTCCCCAGCAACTACGTGCGCG...GAGCTGCAGATCCTGACGGAAGCCATCCGGAACTGGGAGGGCGATGACATTAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR CCA 90 bp AGAGCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGTCAGGCTCCAGGGCTTaGGTGTTTTCGGAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: RAVRWRQALNTRDARPSVSGSRA*VFSEAP
Trigger: TGGAGCCTCCGAAAACACCCAAGCCCTGGAGCCTGA...CACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp ACGCCCAGCGCATGTGGACAAGCACAGACGCCACTGAGTGTGAAGGAACGAGCTATACAGAGAGCAAGGTaGCGCCCCACCCAGCCCTGC +
Preference number: 4 (lower is better)
Translates to: TPSACGQAQTPLSVKERAIQRAR*RPTQPC
Trigger: GCAGGGCTGGGTGGGGCGCCACCTTGCTCTCTGTAT...AGCTCGTTCCTTCACACTCAGTGGCGTCTGTGCTTGTCCACATGCGCTGGGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp CTTTCGGTGAGCACTGAAGCCTGCTGGCTACGGCCAATGGTGGAGGAGACCTCGGGCTTCTGCTTCCGGTaGATGCGGGCATGGGACTTC +
Preference number: 4 (lower is better)
Translates to: LSVSTEACWLRPMVEETSGFCFR*MRAWDF
Trigger: GAAGTCCCATGCCCGCATCCACCGGAAGCAGAAGCC...CGAGGTCTCCTCCACCATTGGCCGTAGCCAGCAGGCTTCAGTGCTCACCGAAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp ACGGTGGAGGCCCTGGTGCTGCGGAACGAACCAGGCATCCACCAGGCTTCTGCTGCAAACACCTCTAGGTaGATGCGGCAGTGCCGTATG +
Preference number: 4 (lower is better)
Translates to: TVEALVLRNEPGIHQASAANTSR*MRQCRM
Trigger: CATACGGCACTGCCGCATCCACCTAGAGGTGTTTGC...AGCAGAAGCCTGGTGGATGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCACCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp AAAACCTGCTCCACGGGCCGGGCTTCCTGCCCAGGACCGCACAGGCTTTCCAGAGCAAACACCTCTAGGTaGATGCGGCAGTGCCGTATG +
Preference number: 4 (lower is better)
Translates to: KTCSTGRASCPGPHRLSRANTSR*MRQCRM
Trigger: CATACGGCACTGCCGCATCCACCTAGAGGTGTTTGC...TCTGGAAAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGTGGAGCAGGTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp CTTTCGGTGAGCACTGAAGCCTGCTGGCTACGGCCAATGGTGGAGGAGACCTCGAACATGAGGCCCTCATaGCCGCACCGTCCAGGGGAA +
Preference number: 4 (lower is better)
Translates to: LSVSTEACWLRPMVEETSNMRPS*PHRPGE
Trigger: TTCCCCTGGACGGTGCGGCCATGAGGGCCTCATGTT...CGAGGTCTCCTCCACCATTGGCCGTAGCCAGCAGGCTTCAGTGCTCACCGAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp GCGGCAGTGCCGTATGGGCCTTCCTTGAGGTCAAGACTGAGTCTGTCAGCCAGCAACATGAGGCCCTCATaGCCGCACCGTCCAGGGGAA +
Preference number: 4 (lower is better)
Translates to: AAVPYGPSLRSRLSLSASNMRPS*PHRPGE
Trigger: TTCCCCTGGACGGTGCGGCCATGAGGGCCTCATGTT...GCTGGCTGACAGACTCAGTCTTGACCTCAAGGAAGGCCCATACGGCACTGCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp ACGGTGGAGGCCCTGGTGCTGCGGAACGAACCAGGCATCCACCAGGCTTCTGCTTGTCAACAGGCGCCCTaGGTGTCCCAGAGAAGTGAA +
Preference number: 4 (lower is better)
Translates to: TVEALVLRNEPGIHQASACQQAP*VSQRSE
Trigger: TTCACTTCTCTGGGACACCCAGGGCGCCTGTTGACA...AGCAGAAGCCTGGTGGATGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCACCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp CTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGCTGCCAGGAGCTCCCTaGCAGCTCTGGGCTTGTGAG +
Preference number: 4 (lower is better)
Translates to: LPRPRAHMLFCTITRTQPLPGAP*QLWACE
Trigger: CTCACAAGCCCAGAGCTGCCAGGGAGCTCCTGGCAG...CGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp GCGGGCATGGGACTTCTTATTCACGTAGCTGGAAAGGACATTCTAGCATGGGGAACAGAGCACAAGCGCTaGGCGCCGTGGCCGGCAGCG +
Preference number: 4 (lower is better)
Translates to: AGMGLLIHVAGKDILAWGTEHKR*APWPAA
Trigger: CGCTGCCGGCCACGGCGCTCAGCGCTTGTGCTCTGT...TCCCCATGCTAGAATGTCCTTTCCAGCTACGTGAATAAGAAGTCCCATGCCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218789.9
ENST00000375736.8
CDS-3UTR TCA 90 bp CTTTCGGTGAGCACTGAAGCCTGCTGGCTACGGCCAATGGTGGAGGAGACCTCGAAAGACTTTATGCGGTaGGACGAGGGCCGGGCACAC +
Preference number: 4 (lower is better)
Translates to: LSVSTEACWLRPMVEETSKDFMR*DEGRAH
Trigger: GTGTGCCCGGCCCTCGTCTCACCGCATAAAGTCTTT...CGAGGTCTCCTCCACCATTGGCCGTAGCCAGCAGGCTTCAGTGCTCACCGAAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp AGAACCGTAAACAGCAACACAACACTCTCCCAAGGTGCCCAGCTCAAAGGCATCAGCCGGTCCGGCCGTTaGGTGTGCCCTCCCACCAGC +
Preference number: 4 (lower is better)
Translates to: RTVNSNTTLSQGAQLKGISRSGR*VCPPTS
Trigger: GCTGGTGGGAGGGCACACTCAACGGCCGGACCGGCT...GATGCCTTTGAGCTGGGCACCTTGGGAGAGTGTTGTGTTGCTGTTTACGGTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp GCGGGCATGGGACTTCTTATTCACGTAGCTGGAAAGGACATTCTAGCATGGGGAAGCCGGTCCGGCCGTTaGGTGTGCCCTCCCACCAGC +
Preference number: 4 (lower is better)
Translates to: AGMGLLIHVAGKDILAWGSRSGR*VCPPTS
Trigger: GCTGGTGGGAGGGCACACTCAACGGCCGGACCGGCT...TCCCCATGCTAGAATGTCCTTTCCAGCTACGTGAATAAGAAGTCCCATGCCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp CTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGCCTCCGACTCTCTGCTaGGCTTCGGGCAACTTGGTG +
Preference number: 4 (lower is better)
Translates to: LPRPRAHMLFCTITRTQPPPTLC*ASGNLV
Trigger: CACCAAGTTGCCCGAAGCTCAGCAGAGAGTCGGAGG...CGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp GGACATGTAAGTGACGTTGCCCAGAGTTTTAATGTCATCGCCCTCCCAGTTCCGGCTTGCTGGACGGAGTaGCCGGGTGGGAGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: GHVSDVAQSFNVIALPVPACWTE*PGGRGG
Trigger: CCCTCCCCTCCCACCCGGTCACTCCGTCCAGCAAGC...CGGAACTGGGAGGGCGATGACATTAAAACTCTGGGCAACGTCACTTACATGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR TCA 90 bp AACGAAAACCTGCTCCACGGGCCGGGCTTCCTGCCCAGGACCGCACAGGCTTTCGTCTTCCGAGAGGTCTaGAGGCTCCAAACGAGAAAG +
Preference number: 4 (lower is better)
Translates to: NENLLHGPGFLPRTAQAFVFREV*RLQTRK
Trigger: CTTTCTCGTTTGGAGCCTTCAGACCTCTCGGAAGAC...GAAAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGTGGAGCAGGTTTTCGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000218789.9
CDS-3UTR TCA 90 bp GCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGCACGTCTTCCGAGAGGTCTaGAGGCTCCAAACGAGAAAG +
Preference number: 4 (lower is better)
Translates to: AVRWRQALNTRDARPSVHVFREV*RLQTRK
Trigger: CTTTCTCGTTTGGAGCCTTCAGACCTCTCGGAAGAC...GTGCACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp ACGGTGGAGGCCCTGGTGCTGCGGAACGAACCAGGCATCCACCAGGCTTCTGCTGGATTTTACTTTCGGTaGGCACTGAAGCCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: TVEALVLRNEPGIHQASAGFYFR*ALKPAG
Trigger: GCCAGCAGGCTTCAGTGCTCACCGAAAGTAAAATCC...AGCAGAAGCCTGGTGGATGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCACCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp AGAGCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGGTGGCGGGGACAGGCTaGAAACGAGACGTTTGTTTC +
Preference number: 4 (lower is better)
Translates to: RAVRWRQALNTRDARPSVVAGTG*KRDVCF
Trigger: GAAACAAACGTCTCGTTTTCAGCCTGTCCCCGCCAC...CACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317133.9
CDS-3UTR GCA 90 bp CTTTCGGTGAGCACTGAAGCCTGCTGGCTACGGCCAATGGTGGAGGAGACCTCGCGAGAATCCCAGGGCTaGTGGCACCTTTGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: LSVSTEACWLRPMVEETSRESQG*WHLWSP
Trigger: TGGAGACCAAAGGTGCCAGCAGCCCTGGGATTCTCG...CGAGGTCTCCTCCACCATTGGCCGTAGCCAGCAGGCTTCAGTGCTCACCGAAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp CTGGGGACTCGGACAGCAACGCTACCGGCTCCGAGAGGACAGTTAATGTCGCCTCGAGAATCCCAGGGCTaGTGGCACCTTTGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: LGTRTATLPAPRGQLMSPRESQG*WHLWSP
Trigger: TGGAGACCAAAGGTGCCAGCAGCCCTGGGATTCTCG...AGGCGACATTAACTGTCCTCTCGGAGCCGGTAGCGTTGCTGTCCGAGTCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp ACCTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGCGGGCTTGCTGTCTaGGTGCTTGCTGGACGGAGT +
Preference number: 4 (lower is better)
Translates to: TCQGPEPTCCSARLPEHSRGLAV*VLAGRS
Trigger: ACTCCGTCCAGCAAGCACGCAGACAGCAAGCCCGCG...GCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp CCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAACTGGGCTCACTCAGCGGCGCGGGCTTaGTGTCTGCGTGCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: PTCCSARLPEHSRWNWAHSAARA*CLRACW
Trigger: CCAGCAAGCACGCAGACAGCAAGCCCGCGCCGCTGA...GTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp AACGAAAACCTGCTCCACGGGCCGGGCTTCCTGCCCAGGACCGCACAGGCTTTCGCTTCCGTTCAGGTTTaGGCTTGGGCAGCAGCTTTT +
Preference number: 4 (lower is better)
Translates to: NENLLHGPGFLPRTAQAFASVQV*AWAAAF
Trigger: AAAAGCTGCTGCCCAAGCGCAAACCTGAACGGAAGC...GAAAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGTGGAGCAGGTTTTCGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp AGAGCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGAACGAGAAAGGCTACTaGGACGCCCCAGGGAGTCTA +
Preference number: 4 (lower is better)
Translates to: RAVRWRQALNTRDARPSVNEKGY*DAPGSL
Trigger: TAGACTCCCTGGGGCGTCGCAGTAGCCTTTCTCGTT...CACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp GCGGCAGTGCCGTATGGGCCTTCCTTGAGGTCAAGACTGAGTCTGTCAGCCAGCAGGCTTCGTCTCCTCTaGACTGGAACACAGTGGGGG +
Preference number: 4 (lower is better)
Translates to: AAVPYGPSLRSRLSLSASRLRLL*TGTQWG
Trigger: CCCCCACTGTGTTCCAGTGCAGAGGAGACGAAGCCT...GCTGGCTGACAGACTCAGTCTTGACCTCAAGGAAGGCCCATACGGCACTGCCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp CTGGGGACTCGGACAGCAACGCTACCGGCTCCGAGAGGACAGTTAATGTCGCCTAGGCTTCGTCTCCTCTaGACTGGAACACAGTGGGGG +
Preference number: 4 (lower is better)
Translates to: LGTRTATLPAPRGQLMSPRLRLL*TGTQWG
Trigger: CCCCCACTGTGTTCCAGTGCAGAGGAGACGAAGCCT...AGGCGACATTAACTGTCCTCTCGGAGCCGGTAGCGTTGCTGTCCGAGTCCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp GCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGCACAGCCACGTAACGGTTTaGTCGGCGGAATTCATCGCT +
Preference number: 4 (lower is better)
Translates to: AVRWRQALNTRDARPSVHSHVTV*SAEFIA
Trigger: AGCGATGAATTCCGCCGAGCAAACCGTTACGTGGCT...GTGCACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317133.9
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp ACCTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCTCCTTCAGCGACGCCTaGAGAAAGCCCTCCGGGTCC +
Preference number: 4 (lower is better)
Translates to: TCQGPEPTCCSARLPEHSSFSDA*RKPSGS
Trigger: GGACCCGGAGGGCTTTCTGCAGGCGTCGCTGAAGGA...GCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317133.9
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp AGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAAGCCCGTCTGTGCACCTaGCAAGGCCCAGAGCCCACA +
Preference number: 4 (lower is better)
Translates to: RPRAHMLFCTITRTQPLEARLCT*QGPEPT
Trigger: TGTGGGCTCTGGGCCTTGGCAGGTGCACAGACGGGC...TTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp CTTCTAGGGCCACACGGAGCAGAAGCAGCTTCCCACCCAAGCACCTCTGAACTGAGCTCAGCCACGGGATaGCACGCCTGGAGTCTGGAA +
Preference number: 4 (lower is better)
Translates to: LLGPHGAEAASHPSTSELSSATG*HAWSLE
Trigger: TTCCAGACTCCAGGCGTGGCATCCCGTGGCTGAGCT...CAGTTCAGAGGTGCTTGGGTGGGAAGCTGCTTCTGCTCCGTGTGGCCCTAGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544132.2
CDS-3UTR CCA 90 bp CTGGGGACTCGGACAGCAACGCTACCGGCTCCGAGAGGACAGTTAATGTCGCCTCCTCCCAGTTCCGGATaGCTTCCGTCAGGATCTGCA +
Preference number: 4 (lower is better)
Translates to: LGTRTATLPAPRGQLMSPPPSSG*LPSGSA
Trigger: TGCAGATCCTGACGGAAGCCATCCGGAACTGGGAGG...AGGCGACATTAACTGTCCTCTCGGAGCCGGTAGCGTTGCTGTCCGAGTCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp CTGGGGACTCGGACAGCAACGCTACCGGCTCCGAGAGGACAGTTAATGTCGCCTAGCACTGAAGCCTGCTaGCTACGGCCAATGGTGGAG +
Preference number: 4 (lower is better)
Translates to: LGTRTATLPAPRGQLMSPSTEAC*LRPMVE
Trigger: CTCCACCATTGGCCGTAGCCAGCAGGCTTCAGTGCT...AGGCGACATTAACTGTCCTCTCGGAGCCGGTAGCGTTGCTGTCCGAGTCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp GCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGCACCACAGAGCCGTGAGGTaGAGACAAGCTCTGAACACA +
Preference number: 4 (lower is better)
Translates to: AVRWRQALNTRDARPSVHHRAVR*RQALNT
Trigger: TGTGTTCAGAGCTTGTCTCCACCTCACGGCTCTGTG...GTGCACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp ACCTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCTGCCAGGAGCTCCCTaGCAGCTCTGGGCTTGTGAG +
Preference number: 4 (lower is better)
Translates to: TCQGPEPTCCSARLPEHSLPGAP*QLWACE
Trigger: CTCACAAGCCCAGAGCTGCCAGGGAGCTCCTGGCAG...GCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp AGAGCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGGAAACAATGGCCCTCTaGATGCCACATCGCCACTGC +
Preference number: 4 (lower is better)
Translates to: RAVRWRQALNTRDARPSVETMAL*MPHRHC
Trigger: GCAGTGGCGATGTGGCATCCAGAGGGCCATTGTTTC...CACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp AACGAAAACCTGCTCCACGGGCCGGGCTTCCTGCCCAGGACCGCACAGGCTTTCGATGACGTCTCCTTTTaGGAAGGAAAGCTCGTCCTC +
Preference number: 4 (lower is better)
Translates to: NENLLHGPGFLPRTAQAFDDVSF*EGKLVL
Trigger: GAGGACGAGCTTTCCTTCTCAAAAGGAGACGTCATC...GAAAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGTGGAGCAGGTTTTCGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp TTACGAAGAGCACCCTCGGATGTAGGCTCACGTGAACACACCACCTCCCTCCAAGCTTCTCGCTGGCCTTaGCCTCGCGCACGTAGTTGC +
Preference number: 4 (lower is better)
Translates to: LRRAPSDVGSREHTTSLQASRWP*PRARSC
Trigger: GCAACTACGTGCGCGAGGTCAAGGCCAGCGAGAAGC...TTGGAGGGAGGTGGTGTGTTCACGTGAGCCTACATCCGAGGGTGCTCTTCGTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp TCCACCAGGCTTCTGCTTCCGGTGGATGCGGGCATGGGACTTCTTATTCACGTAGCTTCTCGCTGGCCTTaGCCTCGCGCACGTAGTTGC +
Preference number: 4 (lower is better)
Translates to: STRLLLPVDAGMGLLIHVASRWP*PRARSC
Trigger: GCAACTACGTGCGCGAGGTCAAGGCCAGCGAGAAGC...TACGTGAATAAGAAGTCCCATGCCCGCATCCACCGGAAGCAGAAGCCTGGTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp AAAACCTGCTCCACGGGCCGGGCTTCCTGCCCAGGACCGCACAGGCTTTCCAGATTCACTGCAGAAGGGTaGTTGGCACAATACGTGAGG +
Preference number: 4 (lower is better)
Translates to: KTCSTGRASCPGPHRLSRFTAEG*LAQYVR
Trigger: CCTCACGTATTGTGCCAATCACCCTTCTGCAGTGAA...TCTGGAAAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGTGGAGCAGGTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp AGAGCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGCCTCACTGTGTTCCGTaGGGACATTCACTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: RAVRWRQALNTRDARPSVPHCVP*GHSLQK
Trigger: CTTCTGCAGTGAATGTCCTCACGGAACACAGTGAGG...CACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp AACGAAAACCTGCTCCACGGGCCGGGCTTCCTGCCCAGGACCGCACAGGCTTTCGGTTTCCCACAGACGTaGCCTTCGTTTGCTTCTGTA +
Preference number: 4 (lower is better)
Translates to: NENLLHGPGFLPRTAQAFGFPQT*PSFASV
Trigger: TACAGAAGCAAACGAAGGTCACGTCTGTGGGAAACC...GAAAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGTGGAGCAGGTTTTCGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp GCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGCACGGTATGAGATGGCACTaGATGAGGCTTTATGGTGGG +
Preference number: 4 (lower is better)
Translates to: AVRWRQALNTRDARPSVHGMRWH*MRLYGG
Trigger: CCCACCATAAAGCCTCATTCAGTGCCATCTCATACC...GTGCACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp AAAACCTGCTCCACGGGCCGGGCTTCCTGCCCAGGACCGCACAGGCTTTCCAGAGGTATGAGATGGCACTaGATGAGGCTTTATGGTGGG +
Preference number: 4 (lower is better)
Translates to: KTCSTGRASCPGPHRLSRGMRWH*MRLYGG
Trigger: CCCACCATAAAGCCTCATTCAGTGCCATCTCATACC...TCTGGAAAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGTGGAGCAGGTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp ACGGTGGAGGCCCTGGTGCTGCGGAACGAACCAGGCATCCACCAGGCTTCTGCTGCCCGCATGAGTGAATaGTCTGCTAAGTTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: TVEALVLRNEPGIHQASAARMSE*SAKLRK
Trigger: CTTCCTCAACTTAGCAGATCATTCACTCATGCGGGC...AGCAGAAGCCTGGTGGATGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCACCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp AGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAAAGCTCTGAACACACGTaGCGCCCGCCCGTCTGTGCA +
Preference number: 4 (lower is better)
Translates to: RPRAHMLFCTITRTQPLESSEHT*RPPVCA
Trigger: TGCACAGACGGGCGGGCGTCACGTGTGTTCAGAGCT...TTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp CCTCTGCACTGGAACACAGTGGGGGAAACGTTCCCTGCTTATGCCTATGTTACTCTGGAGCGAGCCCGCTaGCCCAGATGCCAACCCGCT +
Preference number: 4 (lower is better)
Translates to: PLHWNTVGETFPAYAYVTLERAR*PRCQPA
Trigger: AGCGGGTTGGCATCTGGGGCAGCGGGCTCGCTCCAG...AGTAACATAGGCATAAGCAGGGAACGTTTCCCCCACTGTGTTCCAGTGCAGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000218789.9
ENST00000375736.8
CDS-3UTR GCA 90 bp AGAGCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGAGTCAAAAGACTTTATaGGGTGAGACGAGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: RAVRWRQALNTRDARPSVSQKTL*GETRAG
Trigger: CCCGGCCCTCGTCTCACCGCATAAAGTCTTTTGACT...CACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp ACGGTGGAGGCCCTGGTGCTGCGGAACGAACCAGGCATCCACCAGGCTTCTGCTCGTGAGGACATTCACTaGAGAAGGGTGATTGGCACA +
Preference number: 4 (lower is better)
Translates to: TVEALVLRNEPGIHQASAREDIH*RRVIGT
Trigger: TGTGCCAATCACCCTTCTGCAGTGAATGTCCTCACG...AGCAGAAGCCTGGTGGATGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCACCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp TTTAATGTCATCGCCCTCCCAGTTCCGGATGGCTTCCGTCAGGATCTGCAGCTCCGCGGGCTTGCTGTCTaGGTGCTTGCTGGACGGAGT +
Preference number: 4 (lower is better)
Translates to: FNVIALPVPDGFRQDLQLRGLAV*VLAGRS
Trigger: ACTCCGTCCAGCAAGCACGCAGACAGCAAGCCCGCG...GAGCTGCAGATCCTGACGGAAGCCATCCGGAACTGGGAGGGCGATGACATTAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR GCA 90 bp ACGCCCAGCGCATGTGGACAAGCACAGACGCCACTGAGTGTGAAGGAACGAGCTGACTTGGGTCAGGGGTaGCCAGCTTCACCTCAGAAC +
Preference number: 4 (lower is better)
Translates to: TPSACGQAQTPLSVKERADLGQG*PASPQN
Trigger: GTTCTGAGGTGAAGCTGGGCACCCCTGACCCAAGTC...AGCTCGTTCCTTCACACTCAGTGGCGTCTGTGCTTGTCCACATGCGCTGGGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp CTTTCGGTGAGCACTGAAGCCTGCTGGCTACGGCCAATGGTGGAGGAGACCTCGTGTCAGCCAGCAAGTTaGCCTCAGAAACCCGCAGGT +
Preference number: 4 (lower is better)
Translates to: LSVSTEACWLRPMVEETSCQPAS*PQKPAG
Trigger: ACCTGCGGGTTTCTGAGGGCAACTTGCTGGCTGACA...CGAGGTCTCCTCCACCATTGGCCGTAGCCAGCAGGCTTCAGTGCTCACCGAAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp CTGTGGTCACCCTTATTTATTGCTGAAGCAGAACGAAAACCTGCTCCACGGGCCACGGGCCGGGCTTCCTaGCCAGGACCGCACAGGCTT +
Preference number: 4 (lower is better)
Translates to: LWSPLFIAEAERKPAPRATGRAS*PGPHRL
Trigger: AAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGT...GGCCCGTGGAGCAGGTTTTCGTTCTGCTTCAGCAATAAATAAGGGTGACCACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp ACAGGCTTCGTCTCCTCTGCACTGGAACACAGTGGGGGAAACGTTCCCTGCTTAGGTGAGGCCAGGTTCTaGAGCATGGGGCAGGTCCAC +
Preference number: 4 (lower is better)
Translates to: TGFVSSALEHSGGNVPCLGEARF*SMGQVH
Trigger: GTGGACCTGCCCCATGCTGCAGAACCTGGCCTCACC...TAAGCAGGGAACGTTTCCCCCACTGTGTTCCAGTGCAGAGGAGACGAAGCCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp CGATTACCAGAACACAGCCGTTGGAACTGGGCTCACAGCACCTTTGCTGCATATACGCCCGCCCGTCTGTaGACCTGCCAAGGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: RLPEHSRWNWAHSTFAAYTPARL*TCQGPE
Trigger: CTCTGGGCCTTGGCAGGTGCACAGACGGGCGGGCGT...ATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp GCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGCACCATAAACCCCATCTCTaGCGGAGATTAACACTGGGC +
Preference number: 4 (lower is better)
Translates to: AVRWRQALNTRDARPSVHHKPHL*RRLTLG
Trigger: GCCCAGTGTTAATCTCCGGCAGAGATGGGGTTTATG...GTGCACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp CCTCTGCACTGGAACACAGTGGGGGAAACGTTCCCTGCTTATGCCTATGTTACTCGCGCACGTAGTTGCTaGGGAACCAGCCGGTCCGGC +
Preference number: 4 (lower is better)
Translates to: PLHWNTVGETFPAYAYVTRARSC*GTSRSG
Trigger: GCCGGACCGGCTGGTTCCCCAGCAACTACGTGCGCG...AGTAACATAGGCATAAGCAGGGAACGTTTCCCCCACTGTGTTCCAGTGCAGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp GCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGCACTCAGTGTTCCTGATTTaGGAGACACAGGCTTCTCGC +
Preference number: 4 (lower is better)
Translates to: AVRWRQALNTRDARPSVHSVFLI*ETQASR
Trigger: GCGAGAAGCCTGTGTCTCCCAAATCAGGAACACTGA...GTGCACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp CTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTCAGGCTCCAGGGCTTaGGTGTTTTCGGAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: LPRPRAHMLFCTITRTQPSGSRA*VFSEAP
Trigger: TGGAGCCTCCGAAAACACCCAAGCCCTGGAGCCTGA...CGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp CAGCACGGTGGAGGCCCTGGTGCTGCGGAACGAACCAGGCATCCACCAGGCTTCGTGTTTGCCTTGTTTTaGCGCTGGTGCAGTAAGCTT +
Preference number: 4 (lower is better)
Translates to: QHGGGPGAAERTRHPPGFVFALF*RWCSKL
Trigger: AAGCTTACTGCACCAGCGCCAAAACAAGGCAAACAC...GAAGCCTGGTGGATGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCACCGTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp AGAACCGTAAACAGCAACACAACACTCTCCCAAGGTGCCCAGCTCAAAGGCATCGCTGCCACAGCACGGTaGAGGCCCTGGTGCTGCGGA +
Preference number: 4 (lower is better)
Translates to: RTVNSNTTLSQGAQLKGIAATAR*RPWCCG
Trigger: TCCGCAGCACCAGGGCCTCCACCGTGCTGTGGCAGC...GATGCCTTTGAGCTGGGCACCTTGGGAGAGTGTTGTGTTGCTGTTTACGGTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp CAGCACGGTGGAGGCCCTGGTGCTGCGGAACGAACCAGGCATCCACCAGGCTTCAGAAACCCGCAGGTCTaGGACTGTAATGCTGCTTTA +
Preference number: 4 (lower is better)
Translates to: QHGGGPGAAERTRHPPGFRNPQV*DCNAAL
Trigger: TAAAGCAGCATTACAGTCCCAGACCTGCGGGTTTCT...GAAGCCTGGTGGATGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCACCGTGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp CTTTCGGTGAGCACTGAAGCCTGCTGGCTACGGCCAATGGTGGAGGAGACCTCGTCGTCTCCTCTGCACTaGAACACAGTGGGGGAAACG +
Preference number: 4 (lower is better)
Translates to: LSVSTEACWLRPMVEETSSSPLH*NTVGET
Trigger: CGTTTCCCCCACTGTGTTCCAGTGCAGAGGAGACGA...CGAGGTCTCCTCCACCATTGGCCGTAGCCAGCAGGCTTCAGTGCTCACCGAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp ACAGGCTTCGTCTCCTCTGCACTGGAACACAGTGGGGGAAACGTTCCCTGCTTACCAGGTTCTGCAGCATaGGGCAGGTCCACGCTGAGC +
Preference number: 4 (lower is better)
Translates to: TGFVSSALEHSGGNVPCLPGSAA*GRSTLS
Trigger: GCTCAGCGTGGACCTGCCCCATGCTGCAGAACCTGG...TAAGCAGGGAACGTTTCCCCCACTGTGTTCCAGTGCAGAGGAGACGAAGCCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp CCTCTACTACAGTCCAGTAGTCTACACTTGCAGAGGCTGAATGCTTCAGCTTTCAGCCGGTCCGGCCGTTaGGTGTGCCCTCCCACCAGC +
Preference number: 4 (lower is better)
Translates to: PLLQSSSLHLQRLNASAFSRSGR*VCPPTS
Trigger: GCTGGTGGGAGGGCACACTCAACGGCCGGACCGGCT...GAAAGCTGAAGCATTCAGCCTCTGCAAGTGTAGACTACTGGACTGTAGTAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp AGGGTGATTGGCACAATACGTGAGGTACAGGGTTTTCATCTGTGGCATCAGGTTAGCCGGTCCGGCCGTTaGGTGTGCCCTCCCACCAGC +
Preference number: 4 (lower is better)
Translates to: RVIGTIREVQGFHLWHQVSRSGR*VCPPTS
Trigger: GCTGGTGGGAGGGCACACTCAACGGCCGGACCGGCT...AACCTGATGCCACAGATGAAAACCCTGTACCTCACGTATTGTGCCAATCACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR TCA 90 bp CAGAGTTTTAATGTCATCGCCCTCCCAGTTCCGGATGGCTTCCGTCAGGATCTGGCTTCTCGCTGGCCTTaGCCTCGCGCACGTAGTTGC +
Preference number: 4 (lower is better)
Translates to: QSFNVIALPVPDGFRQDLASRWP*PRARSC
Trigger: GCAACTACGTGCGCGAGGTCAAGGCCAGCGAGAAGC...CAGATCCTGACGGAAGCCATCCGGAACTGGGAGGGCGATGACATTAAAACTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR TCA 90 bp ACGCCCAGCGCATGTGGACAAGCACAGACGCCACTGAGTGTGAAGGAACGAGCTCACCTTTGGTCTCCATaGACTCCCCCAACTCCTCAC +
Preference number: 4 (lower is better)
Translates to: TPSACGQAQTPLSVKERAHLWSP*TPPTPH
Trigger: GTGAGGAGTTGGGGGAGTTCATGGAGACCAAAGGTG...AGCTCGTTCCTTCACACTCAGTGGCGTCTGTGCTTGTCCACATGCGCTGGGCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp GCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGCACCTCTTCCGGACTTCTTaGCATTGGGCTGAAAGGTTT +
Preference number: 4 (lower is better)
Translates to: AVRWRQALNTRDARPSVHLFRTS*HWAERF
Trigger: AAACCTTTCAGCCCAATGTCAAGAAGTCCGGAAGAG...GTGCACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp TATCAAGTTCCCACCCCCTTGGGAGGTCACACGGTGAAACAGACACAGTTATATGCTTGCTGGACGGAGTaGCCGGGTGGGAGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: YQVPTPLGGHTVKQTQLYACWTE*PGGRGG
Trigger: CCCTCCCCTCCCACCCGGTCACTCCGTCCAGCAAGC...ATATAACTGTGTCTGTTTCACCGTGTGACCTCCCAAGGGGGTGGGAACTTGATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp AGAACACAGCCGTTGGAACTGGGCTCACAGCACCTTTGCTGCATATATTCTTCTGCTTGCTGGACGGAGTaGCCGGGTGGGAGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: RTQPLELGSQHLCCIYSSACWTE*PGGRGG
Trigger: CCCTCCCCTCCCACCCGGTCACTCCGTCCAGCAAGC...AGAAGAATATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp AACGAAAACCTGCTCCACGGGCCGGGCTTCCTGCCCAGGACCGCACAGGCTTTCCGCAGCAAACTCATCTaGGAATCACAGTACTCAGAC +
Preference number: 4 (lower is better)
Translates to: NENLLHGPGFLPRTAQAFRSKLI*ESQYSD
Trigger: GTCTGAGTACTGTGATTCTCAGATGAGTTTGCTGCG...GAAAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGTGGAGCAGGTTTTCGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp AAAACCTGCTCCACGGGCCGGGCTTCCTGCCCAGGACCGCACAGGCTTTCCAGACTCATCCATACAAGGTaGGAGCAAAGGAGTAACCCT +
Preference number: 4 (lower is better)
Translates to: KTCSTGRASCPGPHRLSRLIHTR*EQRSNP
Trigger: AGGGTTACTCCTTTGCTCTCACCTTGTATGGATGAG...TCTGGAAAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGTGGAGCAGGTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp AGAGCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGTGGCCCCTCAAGCAATaGCTAGGTGTGGATTTGATG +
Preference number: 4 (lower is better)
Translates to: RAVRWRQALNTRDARPSVWPLKQ*LGVDLM
Trigger: CATCAAATCCACACCTAGTCATTGCTTGAGGGGCCA...CACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp TTACGAAGAGCACCCTCGGATGTAGGCTCACGTGAACACACCACCTCCCTCCAAGGTCTACACAGCCCATaGCACAGGCAACCCACGCCT +
Preference number: 4 (lower is better)
Translates to: LRRAPSDVGSREHTTSLQGLHSP*HRQPTP
Trigger: AGGCGTGGGTTGCCTGTGTCATGGGCTGTGTAGACC...TTGGAGGGAGGTGGTGTGTTCACGTGAGCCTACATCCGAGGGTGCTCTTCGTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp GCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGCACTTTGCAAAGGCCTGGTaGTGGCTTAAACCTACCTTC +
Preference number: 4 (lower is better)
Translates to: AVRWRQALNTRDARPSVHFAKAW*WLKPTF
Trigger: GAAGGTAGGTTTAAGCCATCACCAGGCCTTTGCAAA...GTGCACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp TATCAAGTTCCCACCCCCTTGGGAGGTCACACGGTGAAACAGACACAGTTATATGCCCGCTGCCCCAGATaGCAACCCGCTCAGCCGCTG +
Preference number: 4 (lower is better)
Translates to: YQVPTPLGGHTVKQTQLYARCPR*QPAQPL
Trigger: CAGCGGCTGAGCGGGTTGGCATCTGGGGCAGCGGGC...ATATAACTGTGTCTGTTTCACCGTGTGACCTCCCAAGGGGGTGGGAACTTGATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000218789.9
CDS-3UTR GCA 90 bp GCGGCAGTGCCGTATGGGCCTTCCTTGAGGTCAAGACTGAGTCTGTCAGCCAGCAGTCAAAAGACTTTATaGGGTGAGACGAGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: AAVPYGPSLRSRLSLSASSQKTL*GETRAG
Trigger: CCCGGCCCTCGTCTCACCGCATAAAGTCTTTTGACT...GCTGGCTGACAGACTCAGTCTTGACCTCAAGGAAGGCCCATACGGCACTGCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp CTGGGGACTCGGACAGCAACGCTACCGGCTCCGAGAGGACAGTTAATGTCGCCTAGTCAAAAGACTTTATaGGGTGAGACGAGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: LGTRTATLPAPRGQLMSPSQKTL*GETRAG
Trigger: CCCGGCCCTCGTCTCACCGCATAAAGTCTTTTGACT...AGGCGACATTAACTGTCCTCTCGGAGCCGGTAGCGTTGCTGTCCGAGTCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp CAGCACGGTGGAGGCCCTGGTGCTGCGGAACGAACCAGGCATCCACCAGGCTTCTTTGAAGTCCGAGTGTaGAAAGACTGTGATCCAAGG +
Preference number: 4 (lower is better)
Translates to: QHGGGPGAAERTRHPPGFFEVRV*KDCDPR
Trigger: CCTTGGATCACAGTCTTTGCACACTCGGACTTCAAA...GAAGCCTGGTGGATGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCACCGTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp AGAACCGTAAACAGCAACACAACACTCTCCCAAGGTGCCCAGCTCAAAGGCATCCCTCGCGCACGTAGTTaGTGGGGAACCAGCCGGTCC +
Preference number: 4 (lower is better)
Translates to: RTVNSNTTLSQGAQLKGIPRARS*WGTSRS
Trigger: GGACCGGCTGGTTCCCCAGCAACTACGTGCGCGAGG...GATGCCTTTGAGCTGGGCACCTTGGGAGAGTGTTGTGTTGCTGTTTACGGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp GCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGCACAACTTCTCACTGGTCTaGAATGGCCGTAGGTACGTT +
Preference number: 4 (lower is better)
Translates to: AVRWRQALNTRDARPSVHNFSLV*NGRRYV
Trigger: AACGTACCTACGGCCATTGCAGACCAGTGAGAAGTT...GTGCACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp ACCTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGAGAATCCCAGGGCTaGTGGCACCTTTGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: TCQGPEPTCCSARLPEHSRESQG*WHLWSP
Trigger: TGGAGACCAAAGGTGCCAGCAGCCCTGGGATTCTCG...GCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp AGAGCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGGTTTGCTTCTGTAGGTaGTCCACCCATTCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: RAVRWRQALNTRDARPSVVCFCR*STHSCR
Trigger: TCTGCAGGAATGGGTGGAGCACCTACAGAAGCAAAC...CACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp GCGGCAGTGCCGTATGGGCCTTCCTTGAGGTCAAGACTGAGTCTGTCAGCCAGCGACGTGACCTTCGTTTaGTTCTGTAGGTGCTCCACC +
Preference number: 4 (lower is better)
Translates to: AAVPYGPSLRSRLSLSASDVTFV*FCRCST
Trigger: GGTGGAGCACCTACAGAAGCAAACGAAGGTCACGTC...GCTGGCTGACAGACTCAGTCTTGACCTCAAGGAAGGCCCATACGGCACTGCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp TTACGAAGAGCACCCTCGGATGTAGGCTCACGTGAACACACCACCTCCCTCCAAGGCTTGCTGTCTGCGTaGTTGCTGGACGGAGTGACC +
Preference number: 4 (lower is better)
Translates to: LRRAPSDVGSREHTTSLQGLLSA*LLDGVT
Trigger: GGTCACTCCGTCCAGCAAGCACGCAGACAGCAAGCC...TTGGAGGGAGGTGGTGTGTTCACGTGAGCCTACATCCGAGGGTGCTCTTCGTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp CTGTGGTCACCCTTATTTATTGCTGAAGCAGAACGAAAACCTGCTCCACGGGCCTCAGCGGCGCGGGCTTaGTGTCTGCGTGCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: LWSPLFIAEAERKPAPRASAARA*CLRACW
Trigger: CCAGCAAGCACGCAGACAGCAAGCCCGCGCCGCTGA...GGCCCGTGGAGCAGGTTTTCGTTCTGCTTCAGCAATAAATAAGGGTGACCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp CATCTGAGCCATGACAGTAAGCTCTGCCTTTGGAAAGGAGAGCTCCCACTTCACTCAGCGGCGCGGGCTTaGTGTCTGCGTGCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: HLSHDSKLCLWKGELPLHSAARA*CLRACW
Trigger: CCAGCAAGCACGCAGACAGCAAGCCCGCGCCGCTGA...GTGAAGTGGGAGCTCTCCTTTCCAAAGGCAGAGCTTACTGTCATGGCTCAGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp CTGGGGACTCGGACAGCAACGCTACCGGCTCCGAGAGGACAGTTAATGTCGCCTGCTTCCGTTCAGGTTTaGGCTTGGGCAGCAGCTTTT +
Preference number: 4 (lower is better)
Translates to: LGTRTATLPAPRGQLMSPASVQV*AWAAAF
Trigger: AAAAGCTGCTGCCCAAGCGCAAACCTGAACGGAAGC...AGGCGACATTAACTGTCCTCTCGGAGCCGGTAGCGTTGCTGTCCGAGTCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp CCTCTGCACTGGAACACAGTGGGGGAAACGTTCCCTGCTTATGCCTATGTTACTCGGTGGAGGCCCTGGTaGTGCGGAACGAACCAGGCA +
Preference number: 4 (lower is better)
Translates to: PLHWNTVGETFPAYAYVTRWRPW*CGTNQA
Trigger: TGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCACCG...AGTAACATAGGCATAAGCAGGGAACGTTTCCCCCACTGTGTTCCAGTGCAGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp CTGGGGACTCGGACAGCAACGCTACCGGCTCCGAGAGGACAGTTAATGTCGCCTCCATCAGTATCAGCCTaGAGCATGGCCTCCATCTGT +
Preference number: 4 (lower is better)
Translates to: LGTRTATLPAPRGQLMSPPSVSA*SMASIC
Trigger: ACAGATGGAGGCCATGCTGCAGGCTGATACTGATGG...AGGCGACATTAACTGTCCTCTCGGAGCCGGTAGCGTTGCTGTCCGAGTCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp CATCTGAGCCATGACAGTAAGCTCTGCCTTTGGAAAGGAGAGCTCCCACTTCACGGCGCTCCAGCAGCCTaGAGAGGACCACCCCATCCT +
Preference number: 4 (lower is better)
Translates to: HLSHDSKLCLWKGELPLHGAPAA*RGPPHP
Trigger: AGGATGGGGTGGTCCTCTGCAGGCTGCTGGAGCGCC...GTGAAGTGGGAGCTCTCCTTTCCAAAGGCAGAGCTTACTGTCATGGCTCAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317133.9
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp AGAGCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGGCCCACATGCTGTTCTaGACGATTACCAGAACACAG +
Preference number: 4 (lower is better)
Translates to: RAVRWRQALNTRDARPSVAHMLF*TITRTQ
Trigger: CTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGC...CACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp AAAGTAGAAACAATGGCCCTCTGGATGCCACATCGCCACTGCCACAGGAGAACTGCCCGTCTGTGCACCTaGCAAGGCCCAGAGCCCACA +
Preference number: 4 (lower is better)
Translates to: KVETMALWMPHRHCHRRTARLCT*QGPEPT
Trigger: TGTGGGCTCTGGGCCTTGGCAGGTGCACAGACGGGC...AGTTCTCCTGTGGCAGTGGCGATGTGGCATCCAGAGGGCCATTGTTTCTACTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp GCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGCACCATGACAGTAAGCTCTaGCTTTGGAAAGGAGAGCTC +
Preference number: 4 (lower is better)
Translates to: AVRWRQALNTRDARPSVHHDSKL*LWKGEL
Trigger: GAGCTCTCCTTTCCAAAGGCAGAGCTTACTGTCATG...GTGCACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp GCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGCACTTTGGAATTAACAGCTaGCCTGATGTCTCCTGTGCC +
Preference number: 4 (lower is better)
Translates to: AVRWRQALNTRDARPSVHFGINS*PDVSCA
Trigger: GGCACAGGAGACATCAGGGCAGCTGTTAATTCCAAA...GTGCACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp TGTGGTAGGCGGGCGTCAGCGGCGCGGGCTTGCTGTCTGCGTGCTTGCTGGACGCTACCAGTTGATTGTTaGTATTATCGGTCATGTCCT +
Preference number: 4 (lower is better)
Translates to: CGRRASAARACCLRACWTLPVDC*YYRSCP
Trigger: AGGACATGACCGATAATAGCAACAATCAACTGGTAG...CGTCCAGCAAGCACGCAGACAGCAAGCCCGCGCCGCTGACGCCCGCCTACCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR CCA 90 bp AGAGCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGTCCACACGGGTGACATaGATGACGTCTCCTTTTGAG +
Preference number: 4 (lower is better)
Translates to: RAVRWRQALNTRDARPSVSTRVT*MTSPFE
Trigger: CTCAAAAGGAGACGTCATCCATGTCACCCGTGTGGA...CACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp TGTGGTCCTGAGTGCACCCCGACTTGGGTCAGGGGTGCCCAGCTTCACCTCAGATCAGTGTTCCTGATTTaGGAGACACAGGCTTCTCGC +
Preference number: 4 (lower is better)
Translates to: CGPECTPTWVRGAQLHLRSVFLI*ETQASR
Trigger: GCGAGAAGCCTGTGTCTCCCAAATCAGGAACACTGA...TCTGAGGTGAAGCTGGGCACCCCTGACCCAAGTCGGGGTGCACTCAGGACCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp ATCGCCCTCCCAGTTCCGGATGGCTTCCGTCAGGATCTGCAGCTCAAGCTCTTTCCTCCCAGTTCCGGATaGCTTCCGTCAGGATCTGCA +
Preference number: 4 (lower is better)
Translates to: IALPVPDGFRQDLQLKLFPPSSG*LPSGSA
Trigger: TGCAGATCCTGACGGAAGCCATCCGGAACTGGGAGG...AAAGAGCTTGAGCTGCAGATCCTGACGGAAGCCATCCGGAACTGGGAGGGCGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR CCA 90 bp GCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGCACGTGTTTGCCTTGTTTTaGCGCTGGTGCAGTAAGCTT +
Preference number: 4 (lower is better)
Translates to: AVRWRQALNTRDARPSVHVFALF*RWCSKL
Trigger: AAGCTTACTGCACCAGCGCCAAAACAAGGCAAACAC...GTGCACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp CCTCTGCACTGGAACACAGTGGGGGAAACGTTCCCTGCTTATGCCTATGTTACTGCACGGTGGAGGCCCTaGTGCTGCGGAACGAACCAG +
Preference number: 4 (lower is better)
Translates to: PLHWNTVGETFPAYAYVTARWRP*CCGTNQ
Trigger: CTGGTTCGTTCCGCAGCACCAGGGCCTCCACCGTGC...AGTAACATAGGCATAAGCAGGGAACGTTTCCCCCACTGTGTTCCAGTGCAGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp AACGAAAACCTGCTCCACGGGCCGGGCTTCCTGCCCAGGACCGCACAGGCTTTCAGAAACCCGCAGGTCTaGGACTGTAATGCTGCTTTA +
Preference number: 4 (lower is better)
Translates to: NENLLHGPGFLPRTAQAFRNPQV*DCNAAL
Trigger: TAAAGCAGCATTACAGTCCCAGACCTGCGGGTTTCT...GAAAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGTGGAGCAGGTTTTCGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp CTGGGGACTCGGACAGCAACGCTACCGGCTCCGAGAGGACAGTTAATGTCGCCTTGCACTGGAACACAGTaGGGGAAACGTTCCCTGCTT +
Preference number: 4 (lower is better)
Translates to: LGTRTATLPAPRGQLMSPCTGTQ*GKRSLL
Trigger: AAGCAGGGAACGTTTCCCCCACTGTGTTCCAGTGCA...AGGCGACATTAACTGTCCTCTCGGAGCCGGTAGCGTTGCTGTCCGAGTCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp AGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAAGGTAGACTTTCTCGATaGTCCCGGGGAGCAGGCGCT +
Preference number: 4 (lower is better)
Translates to: RPRAHMLFCTITRTQPLEGRLSR*SRGAGA
Trigger: AGCGCCTGCTCCCCGGGACCATCGAGAAAGTCTACC...TTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317133.9
ENST00000375741.6
CDS-3UTR CCA 90 bp AGAGCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGCCAGAGTCTCCTCCATaGTTCTGGCACTTAGATCAC +
Preference number: 4 (lower is better)
Translates to: RAVRWRQALNTRDARPSVPESPP*FWHLDH
Trigger: GTGATCTAAGTGCCAGAACCATGGAGGAGACTCTGG...CACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp CTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGCACAGCCGTTGGAACTaGGCTCACAGCACCTTTGCT +
Preference number: 4 (lower is better)
Translates to: LPRPRAHMLFCTITRTQPHSRWN*AHSTFA
Trigger: AGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTG...CGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp GCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGCACAGTAAGCTCTGCCTTTaGAAAGGAGAGCTCCCACTT +
Preference number: 4 (lower is better)
Translates to: AVRWRQALNTRDARPSVHSKLCL*KGELPL
Trigger: AAGTGGGAGCTCTCCTTTCCAAAGGCAGAGCTTACT...GTGCACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp GCAGAAGCAGCTTCCCACCCAAGCACCTCTGAACTGTGCGTGAGGAGGCACAATACGGGATGCCACGCCTaGAGTCTGGAAGGAGGAGAA +
Preference number: 4 (lower is better)
Translates to: AEAASHPSTSELCVRRHNTGCHA*SLEGGE
Trigger: TTCTCCTCCTTCCAGACTCCAGGCGTGGCATCCCGT...ATTGTGCCTCCTCACGCACAGTTCAGAGGTGCTTGGGTGGGAAGCTGCTTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544132.2
CDS-3UTR TCA 90 bp GCGGGCATGGGACTTCTTATTCACGTAGCTGGAAAGGACATTCTAGCATGGGGAGCTTCTCGCTGGCCTTaGCCTCGCGCACGTAGTTGC +
Preference number: 4 (lower is better)
Translates to: AGMGLLIHVAGKDILAWGASRWP*PRARSC
Trigger: GCAACTACGTGCGCGAGGTCAAGGCCAGCGAGAAGC...TCCCCATGCTAGAATGTCCTTTCCAGCTACGTGAATAAGAAGTCCCATGCCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp ACGCCCAGCGCATGTGGACAAGCACAGACGCCACTGAGTGTGAAGGAACGAGCTCCTCACTGTGTTCCGTaGGGACATTCACTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: TPSACGQAQTPLSVKERAPHCVP*GHSLQK
Trigger: CTTCTGCAGTGAATGTCCTCACGGAACACAGTGAGG...AGCTCGTTCCTTCACACTCAGTGGCGTCTGTGCTTGTCCACATGCGCTGGGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp GCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGCACTTCTTGACATTGGGCTaGAAGGTTTTTGAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: AVRWRQALNTRDARPSVHFLTLG*KVFEGS
Trigger: GCTGCCTTCAAAAACCTTTCAGCCCAATGTCAAGAA...GTGCACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp AAAACCTGCTCCACGGGCCGGGCTTCCTGCCCAGGACCGCACAGGCTTTCCAGAAGTGCCTTGCCATGTTaGATTGAGTGTTTGCCTTGT +
Preference number: 4 (lower is better)
Translates to: KTCSTGRASCPGPHRLSRSALPC*IECLPC
Trigger: ACAAGGCAAACACTCAATTCAACATGGCAAGGCACT...TCTGGAAAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGTGGAGCAGGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000218789.9
CDS-3UTR TCA 90 bp CTTTCGGTGAGCACTGAAGCCTGCTGGCTACGGCCAATGGTGGAGGAGACCTCGGTTCACAGAGTGGATTaGTGTAGCTCAGGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: LSVSTEACWLRPMVEETSVHRVD*CSSGPQ
Trigger: CTGAGGACCTGAGCTACATCAATCCACTCTGTGAAC...CGAGGTCTCCTCCACCATTGGCCGTAGCCAGCAGGCTTCAGTGCTCACCGAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp CAGCACGGTGGAGGCCCTGGTGCTGCGGAACGAACCAGGCATCCACCAGGCTTCACCCTTATTTATTGCTaGAGCAGAACGAAAACCTGC +
Preference number: 4 (lower is better)
Translates to: QHGGGPGAAERTRHPPGFTLIYC*SRTKTC
Trigger: GCAGGTTTTCGTTCTGCTTCAGCAATAAATAAGGGT...GAAGCCTGGTGGATGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCACCGTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp GCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGCACCTGGTGAGAGATATATaGGCAACAGCTCTTACGAGA +
Preference number: 4 (lower is better)
Translates to: AVRWRQALNTRDARPSVHLVRDI*ATALTR
Trigger: TCTCGTAAGAGCTGTTGCTCATATATCTCTCACCAG...GTGCACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp CGATTACCAGAACACAGCCGTTGGAACTGGGCTCACAGCACCTTTGCTGCATATGGTGGAGACAAGCTCTaGACACACGTGACGCCCGCC +
Preference number: 4 (lower is better)
Translates to: RLPEHSRWNWAHSTFAAYGGDKL*THVTPA
Trigger: GGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACC...ATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp AGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAAGTGGTTACCAGATGCTaGGGAGGCTGGGAAGGAGGA +
Preference number: 4 (lower is better)
Translates to: RPRAHMLFCTITRTQPLEVVTRC*GGWEGG
Trigger: TCCTCCTTCCCAGCCTCCTCAGCATCTGGTAACCAC...TTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375741.6
CDS-3UTR GCA 90 bp CTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGAGTCAAAAGACTTTATaGGGTGAGACGAGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: LPRPRAHMLFCTITRTQPSQKTL*GETRAG
Trigger: CCCGGCCCTCGTCTCACCGCATAAAGTCTTTTGACT...CGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp GCGTGTGGTAGGCGGGCGTCAGCGGCGCGGGCTTGCTGTCTGCGTGCTTGCTGGCTGGAAGTTAAACTTTaGTCTTACTACCAGTTGATT +
Preference number: 4 (lower is better)
Translates to: ACGRRASAARACCLRACWLEVKL*SYYQLI
Trigger: AATCAACTGGTAGTAAGAGCAAAGTTTAACTTCCAG...CCAGCAAGCACGCAGACAGCAAGCCCGCGCCGCTGACGCCCGCCTACCACACGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR GCA 90 bp CAGCACGGTGGAGGCCCTGGTGCTGCGGAACGAACCAGGCATCCACCAGGCTTCTCGTCCTCATTGGTCTaGTGGAAGTTAAACTTTGCT +
Preference number: 4 (lower is better)
Translates to: QHGGGPGAAERTRHPPGFSSSLV*WKLNFA
Trigger: AGCAAAGTTTAACTTCCAGCAGACCAATGAGGACGA...GAAGCCTGGTGGATGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCACCGTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp CATCTGAGAATCACAGTACTCAGACAGCGGACAAGAGCAAACACCTCTAGGTGGCCTCGCGCACGTAGTTaGTGGGGAACCAGCCGGTCC +
Preference number: 4 (lower is better)
Translates to: HLRITVLRQRTRANTSRWPRARS*WGTSRS
Trigger: GGACCGGCTGGTTCCCCAGCAACTACGTGCGCGAGG...CCACCTAGAGGTGTTTGCTCTTGTCCGCTGTCTGAGTACTGTGATTCTCAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp AGAGCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGAACTTCTCACTGGTCTaGAATGGCCGTAGGTACGTT +
Preference number: 4 (lower is better)
Translates to: RAVRWRQALNTRDARPSVNFSLV*NGRRYV
Trigger: AACGTACCTACGGCCATTGCAGACCAGTGAGAAGTT...CACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp TCCACCAGGCTTCTGCTTCCGGTGGATGCGGGCATGGGACTTCTTATTCACGTACGAGAATCCCAGGGCTaGTGGCACCTTTGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: STRLLLPVDAGMGLLIHVRESQG*WHLWSP
Trigger: TGGAGACCAAAGGTGCCAGCAGCCCTGGGATTCTCG...TACGTGAATAAGAAGTCCCATGCCCGCATCCACCGGAAGCAGAAGCCTGGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp ACGCCCAGCGCATGTGGACAAGCACAGACGCCACTGAGTGTGAAGGAACGAGCTGCTTCCGTCAGGATCTaGAGCTCAAGCTCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: TPSACGQAQTPLSVKERAASVRI*SSSSFL
Trigger: GAGGAAAGAGCTTGAGCTGCAGATCCTGACGGAAGC...AGCTCGTTCCTTCACACTCAGTGGCGTCTGTGCTTGTCCACATGCGCTGGGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp CTGGGGACTCGGACAGCAACGCTACCGGCTCCGAGAGGACAGTTAATGTCGCCTGTTTGCTTCTGTAGGTaGTCCACCCATTCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: LGTRTATLPAPRGQLMSPVCFCR*STHSCR
Trigger: TCTGCAGGAATGGGTGGAGCACCTACAGAAGCAAAC...AGGCGACATTAACTGTCCTCTCGGAGCCGGTAGCGTTGCTGTCCGAGTCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp GTGGGGAAGAAAGAAATCACGGCCACCTGGAATTACAGCCACCCTGAAGAAGGACGCGGGCTTGCTGTCTaGGTGCTTGCTGGACGGAGT +
Preference number: 4 (lower is better)
Translates to: VGKKEITATWNYSHPEEGRGLAV*VLAGRS
Trigger: ACTCCGTCCAGCAAGCACGCAGACAGCAAGCCCGCG...TCCTTCTTCAGGGTGGCTGTAATTCCAGGTGGCCGTGATTTCTTTCTTCCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp GCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGCACGTTGAATTGAGTGTTTaGCTTGTTTTGGCGCTGGTG +
Preference number: 4 (lower is better)
Translates to: AVRWRQALNTRDARPSVHVELSV*LVLALV
Trigger: CACCAGCGCCAAAACAAGGCAAACACTCAATTCAAC...GTGCACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp CAGCACGGTGGAGGCCCTGGTGCTGCGGAACGAACCAGGCATCCACCAGGCTTCATCAGGTCAGTGCCTTaGCATGTTGAATTGAGTGTT +
Preference number: 4 (lower is better)
Translates to: QHGGGPGAAERTRHPPGFIRSVP*HVELSV
Trigger: AACACTCAATTCAACATGGCAAGGCACTGACCTGAT...GAAGCCTGGTGGATGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCACCGTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000218789.9
CDS-3UTR GCA 90 bp ACGCCCAGCGCATGTGGACAAGCACAGACGCCACTGAGTGTGAAGGAACGAGCTTCTGCTTCCGGTGGATaGGGGCATGGGACTTCTTAT +
Preference number: 4 (lower is better)
Translates to: TPSACGQAQTPLSVKERASASGG*GHGTSY
Trigger: ATAAGAAGTCCCATGCCCGCATCCACCGGAAGCAGA...AGCTCGTTCCTTCACACTCAGTGGCGTCTGTGCTTGTCCACATGCGCTGGGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp CCTCTGCACTGGAACACAGTGGGGGAAACGTTCCCTGCTTATGCCTATGTTACTTGGAGGCCCTGGTGCTaGGGAACGAACCAGGCATCC +
Preference number: 4 (lower is better)
Translates to: PLHWNTVGETFPAYAYVTWRPWC*GTNQAS
Trigger: GGATGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCA...AGTAACATAGGCATAAGCAGGGAACGTTTCCCCCACTGTGTTCCAGTGCAGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp ACGGTGGAGGCCCTGGTGCTGCGGAACGAACCAGGCATCCACCAGGCTTCTGCTGGGGGAAACGTTCCCTaGTTATGCCTATGTTACTTA +
Preference number: 4 (lower is better)
Translates to: TVEALVLRNEPGIHQASAGGNVP*LCLCYL
Trigger: TAAGTAACATAGGCATAAGCAGGGAACGTTTCCCCC...AGCAGAAGCCTGGTGGATGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCACCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp CCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAACTGGGCTCACCAATGGCCCTCTGGATaGCACATCGCCACTGCCACA +
Preference number: 4 (lower is better)
Translates to: PTCCSARLPEHSRWNWAHQWPSG*HIATAT
Trigger: TGTGGCAGTGGCGATGTGGCATCCAGAGGGCCATTG...GTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp TTTAATGTCATCGCCCTCCCAGTTCCGGATGGCTTCCGTCAGGATCTGCAGCTCGTCTGCTGGCAGGCATaGCTTTCAACCCTGCAGGCA +
Preference number: 4 (lower is better)
Translates to: FNVIALPVPDGFRQDLQLVCWQA*LSTLQA
Trigger: TGCCTGCAGGGTTGAAAGGCATGCCTGCCAGCAGAC...GAGCTGCAGATCCTGACGGAAGCCATCCGGAACTGGGAGGGCGATGACATTAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR CCA 90 bp CTGGGGACTCGGACAGCAACGCTACCGGCTCCGAGAGGACAGTTAATGTCGCCTTCCACACGGGTGACATaGATGACGTCTCCTTTTGAG +
Preference number: 4 (lower is better)
Translates to: LGTRTATLPAPRGQLMSPSTRVT*MTSPFE
Trigger: CTCAAAAGGAGACGTCATCCATGTCACCCGTGTGGA...AGGCGACATTAACTGTCCTCTCGGAGCCGGTAGCGTTGCTGTCCGAGTCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp AAAACCTGCTCCACGGGCCGGGCTTCCTGCCCAGGACCGCACAGGCTTTCCAGATCGTATCAAATCCTTTaGGAGGGCTCTTCAGTGTTC +
Preference number: 4 (lower is better)
Translates to: KTCSTGRASCPGPHRLSRSYQIL*EGSSVF
Trigger: GAACACTGAAGAGCCCTCCCAAAGGATTTGATACGA...TCTGGAAAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGTGGAGCAGGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp AACGAAAACCTGCTCCACGGGCCGGGCTTCCTGCCCAGGACCGCACAGGCTTTCGAGCTTCGGGCAACTTaGTGCATTCTTCTAAAGACT +
Preference number: 4 (lower is better)
Translates to: NENLLHGPGFLPRTAQAFELRAT*CILLKT
Trigger: AGTCTTTAGAAGAATGCACCAAGTTGCCCGAAGCTC...GAAAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGTGGAGCAGGTTTTCGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp GCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGCACGAGCTTCGGGCAACTTaGTGCATTCTTCTAAAGACT +
Preference number: 4 (lower is better)
Translates to: AVRWRQALNTRDARPSVHELRAT*CILLKT
Trigger: AGTCTTTAGAAGAATGCACCAAGTTGCCCGAAGCTC...GTGCACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp TTACGAAGAGCACCCTCGGATGTAGGCTCACGTGAACACACCACCTCCCTCCAAGTTTGCTCAGGCCCGTaGTCAGCACGAGAATCCCAG +
Preference number: 4 (lower is better)
Translates to: LRRAPSDVGSREHTTSLQVCSGP*SARESQ
Trigger: CTGGGATTCTCGTGCTGACCACGGGCCTGAGCAAAC...TTGGAGGGAGGTGGTGTGTTCACGTGAGCCTACATCCGAGGGTGCTCTTCGTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp AGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAAGTTTGCTCAGGCCCGTaGTCAGCACGAGAATCCCAG +
Preference number: 4 (lower is better)
Translates to: RPRAHMLFCTITRTQPLEVCSGP*SARESQ
Trigger: CTGGGATTCTCGTGCTGACCACGGGCCTGAGCAAAC...TTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp TTACGAAGAGCACCCTCGGATGTAGGCTCACGTGAACACACCACCTCCCTCCAACCTCCCAGTTCCGGATaGCTTCCGTCAGGATCTGCA +
Preference number: 4 (lower is better)
Translates to: LRRAPSDVGSREHTTSLQPPSSG*LPSGSA
Trigger: TGCAGATCCTGACGGAAGCCATCCGGAACTGGGAGG...TTGGAGGGAGGTGGTGTGTTCACGTGAGCCTACATCCGAGGGTGCTCTTCGTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp AGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAACCTCCCAGTTCCGGATaGCTTCCGTCAGGATCTGCA +
Preference number: 4 (lower is better)
Translates to: RPRAHMLFCTITRTQPLEPPSSG*LPSGSA
Trigger: TGCAGATCCTGACGGAAGCCATCCGGAACTGGGAGG...TTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp GCGGCAGTGCCGTATGGGCCTTCCTTGAGGTCAAGACTGAGTCTGTCAGCCAGCCTGAATGAGGCTTTATaGTGGGGTTTCCCACAGACG +
Preference number: 4 (lower is better)
Translates to: AAVPYGPSLRSRLSLSASLNEAL*WGFPQT
Trigger: CGTCTGTGGGAAACCCCACCATAAAGCCTCATTCAG...GCTGGCTGACAGACTCAGTCTTGACCTCAAGGAAGGCCCATACGGCACTGCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp CTGGGGACTCGGACAGCAACGCTACCGGCTCCGAGAGGACAGTTAATGTCGCCTGAGTCTAGGCTTGGTTaGTCATCATCAGCCAAGACG +
Preference number: 4 (lower is better)
Translates to: LGTRTATLPAPRGQLMSPESRLG*SSSAKT
Trigger: CGTCTTGGCTGATGATGACCAACCAAGCCTAGACTC...AGGCGACATTAACTGTCCTCTCGGAGCCGGTAGCGTTGCTGTCCGAGTCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000218789.9
CDS-3UTR CCA 90 bp CCTCTGCACTGGAACACAGTGGGGGAAACGTTCCCTGCTTATGCCTATGTTACTGAGTGCACCCCGACTTaGGTCAGGGGTGCCCAGCTT +
Preference number: 4 (lower is better)
Translates to: PLHWNTVGETFPAYAYVTECTPT*VRGAQL
Trigger: AAGCTGGGCACCCCTGACCCAAGTCGGGGTGCACTC...AGTAACATAGGCATAAGCAGGGAACGTTTCCCCCACTGTGTTCCAGTGCAGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp AACGAAAACCTGCTCCACGGGCCGGGCTTCCTGCCCAGGACCGCACAGGCTTTCGAGATGTTCACAGAGTaGATTGATGTAGCTCAGGTC +
Preference number: 4 (lower is better)
Translates to: NENLLHGPGFLPRTAQAFEMFTE*IDVAQV
Trigger: GACCTGAGCTACATCAATCCACTCTGTGAACATCTC...GAAAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGTGGAGCAGGTTTTCGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp CATCTGAGAATCACAGTACTCAGACAGCGGACAAGAGCAAACACCTCTAGGTGGGCACGGTGGAGGCCCTaGTGCTGCGGAACGAACCAG +
Preference number: 4 (lower is better)
Translates to: HLRITVLRQRTRANTSRWARWRP*CCGTNQ
Trigger: CTGGTTCGTTCCGCAGCACCAGGGCCTCCACCGTGC...CCACCTAGAGGTGTTTGCTCTTGTCCGCTGTCTGAGTACTGTGATTCTCAGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp TCCACCAGGCTTCTGCTTCCGGTGGATGCGGGCATGGGACTTCTTATTCACGTATGCGGCAGTGCCGTATaGGCCTTCCTTGAGGTCAAG +
Preference number: 4 (lower is better)
Translates to: STRLLLPVDAGMGLLIHVCGSAV*AFLEVK
Trigger: CTTGACCTCAAGGAAGGCCCATACGGCACTGCCGCA...TACGTGAATAAGAAGTCCCATGCCCGCATCCACCGGAAGCAGAAGCCTGGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp TCCACCAGGCTTCTGCTTCCGGTGGATGCGGGCATGGGACTTCTTATTCACGTAAGCACTGAAGCCTGCTaGCTACGGCCAATGGTGGAG +
Preference number: 4 (lower is better)
Translates to: STRLLLPVDAGMGLLIHVSTEAC*LRPMVE
Trigger: CTCCACCATTGGCCGTAGCCAGCAGGCTTCAGTGCT...TACGTGAATAAGAAGTCCCATGCCCGCATCCACCGGAAGCAGAAGCCTGGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp CTGTGGTCACCCTTATTTATTGCTGAAGCAGAACGAAAACCTGCTCCACGGGCCCCAGGTTCTGCAGCATaGGGCAGGTCCACGCTGAGC +
Preference number: 4 (lower is better)
Translates to: LWSPLFIAEAERKPAPRAPGSAA*GRSTLS
Trigger: GCTCAGCGTGGACCTGCCCCATGCTGCAGAACCTGG...GGCCCGTGGAGCAGGTTTTCGTTCTGCTTCAGCAATAAATAAGGGTGACCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp ACGGTGGAGGCCCTGGTGCTGCGGAACGAACCAGGCATCCACCAGGCTTCTGCTAGCCGAGGAAGATACTaGATCCACAGAAAGAAAAGG +
Preference number: 4 (lower is better)
Translates to: TVEALVLRNEPGIHQASASRGRY*IHRKKR
Trigger: CCTTTTCTTTCTGTGGATCCAGTATCTTCCTCGGCT...AGCAGAAGCCTGGTGGATGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCACCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp TTACGAAGAGCACCCTCGGATGTAGGCTCACGTGAACACACCACCTCCCTCCAATATGGATGTCAGGGGTaGGGAGCCGGGGGAACTGAA +
Preference number: 4 (lower is better)
Translates to: LRRAPSDVGSREHTTSLQYGCQG*GAGGTE
Trigger: TTCAGTTCCCCCGGCTCCCCACCCCTGACATCCATA...TTGGAGGGAGGTGGTGTGTTCACGTGAGCCTACATCCGAGGGTGCTCTTCGTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp ACCTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCTGAATACGTGGGTTTaGCGAAGGAGTGGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: TCQGPEPTCCSARLPEHSLNTWV*RRSGQW
Trigger: CCACTGCCCACTCCTTCGCCAAACCCACGTATTCAG...GCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp AAAGTAGAAACAATGGCCCTCTGGATGCCACATCGCCACTGCCACAGGAGAACTGCTCCCTGGCAGCTCTaGGCTTGTGAGCAGCAGGAC +
Preference number: 4 (lower is better)
Translates to: KVETMALWMPHRHCHRRTAPWQL*ACEQQD
Trigger: GTCCTGCTGCTCACAAGCCCAGAGCTGCCAGGGAGC...AGTTCTCCTGTGGCAGTGGCGATGTGGCATCCAGAGGGCCATTGTTTCTACTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp TGTGGTCCTGAGTGCACCCCGACTTGGGTCAGGGGTGCCCAGCTTCACCTCAGAGATTGGCACAATACGTaGGGTACAGGGTTTTCATCT +
Preference number: 4 (lower is better)
Translates to: CGPECTPTWVRGAQLHLRDWHNT*GTGFSS
Trigger: AGATGAAAACCCTGTACCTCACGTATTGTGCCAATC...TCTGAGGTGAAGCTGGGCACCCCTGACCCAAGTCGGGGTGCACTCAGGACCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp AGAGCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGGATTGGCACAATACGTaGGGTACAGGGTTTTCATCT +
Preference number: 4 (lower is better)
Translates to: RAVRWRQALNTRDARPSVDWHNT*GTGFSS
Trigger: AGATGAAAACCCTGTACCTCACGTATTGTGCCAATC...CACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp CTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTCACTGCAGAAGGGTaGTTGGCACAATACGTGAGG +
Preference number: 4 (lower is better)
Translates to: LPRPRAHMLFCTITRTQPFTAEG*LAQYVR
Trigger: CCTCACGTATTGTGCCAATCACCCTTCTGCAGTGAA...CGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp AGAGCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGGGGCTGAAAGGTTTTTaGAGGCAGCCATGGATTTTT +
Preference number: 4 (lower is better)
Translates to: RAVRWRQALNTRDARPSVGLKGF*RQPWIF
Trigger: AAAAATCCATGGCTGCCTTCAAAAACCTTTCAGCCC...CACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp CTGGGGACTCGGACAGCAACGCTACCGGCTCCGAGAGGACAGTTAATGTCGCCTCTCTTCCGGACTTCTTaGCATTGGGCTGAAAGGTTT +
Preference number: 4 (lower is better)
Translates to: LGTRTATLPAPRGQLMSPLFRTS*HWAERF
Trigger: AAACCTTTCAGCCCAATGTCAAGAAGTCCGGAAGAG...AGGCGACATTAACTGTCCTCTCGGAGCCGGTAGCGTTGCTGTCCGAGTCCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp AGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAATCACTTCCGGCACACTaGATCAGGACCTGGGACATG +
Preference number: 4 (lower is better)
Translates to: RPRAHMLFCTITRTQPLESLPAH*IRTWDM
Trigger: CATGTCCCAGGTCCTGATTCAGTGTGCCGGAAGTGA...TTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp AGAGCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGAGTGCCTTGCCATGTTaGATTGAGTGTTTGCCTTGT +
Preference number: 4 (lower is better)
Translates to: RAVRWRQALNTRDARPSVSALPC*IECLPC
Trigger: ACAAGGCAAACACTCAATTCAACATGGCAAGGCACT...CACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp AGAACCGTAAACAGCAACACAACACTCTCCCAAGGTGCCCAGCTCAAAGGCATCACTTTCGGTGAGCACTaGAGCCTGCTGGCTACGGCC +
Preference number: 4 (lower is better)
Translates to: RTVNSNTTLSQGAQLKGITFGEH*SLLATA
Trigger: GGCCGTAGCCAGCAGGCTTCAGTGCTCACCGAAAGT...GATGCCTTTGAGCTGGGCACCTTGGGAGAGTGTTGTGTTGCTGTTTACGGTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp GCGGGCATGGGACTTCTTATTCACGTAGCTGGAAAGGACATTCTAGCATGGGGAACTTTCGGTGAGCACTaGAGCCTGCTGGCTACGGCC +
Preference number: 4 (lower is better)
Translates to: AGMGLLIHVAGKDILAWGTFGEH*SLLATA
Trigger: GGCCGTAGCCAGCAGGCTTCAGTGCTCACCGAAAGT...TCCCCATGCTAGAATGTCCTTTCCAGCTACGTGAATAAGAAGTCCCATGCCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp GCGGCAGTGCCGTATGGGCCTTCCTTGAGGTCAAGACTGAGTCTGTCAGCCAGCGAAGGAACGAGCTTCTaGTGCTACATTCCAACATCG +
Preference number: 4 (lower is better)
Translates to: AAVPYGPSLRSRLSLSASEGTSF*CYIPTS
Trigger: CGATGTTGGAATGTAGCATCAGAAGCTCGTTCCTTC...GCTGGCTGACAGACTCAGTCTTGACCTCAAGGAAGGCCCATACGGCACTGCCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp CAGCACGGTGGAGGCCCTGGTGCTGCGGAACGAACCAGGCATCCACCAGGCTTCAGAGAAGTGAAGAAATaGTTGGCATTAAGGAGTCCA +
Preference number: 4 (lower is better)
Translates to: QHGGGPGAAERTRHPPGFREVKK*LALRSP
Trigger: TGGACTCCTTAATGCCAATCATTTCTTCACTTCTCT...GAAGCCTGGTGGATGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCACCGTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp GCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGCACAATGATGGTTCCATCTaGAGCCATATGGGTCTGAAT +
Preference number: 4 (lower is better)
Translates to: AVRWRQALNTRDARPSVHNDGSI*SHMGLN
Trigger: ATTCAGACCCATATGGCTTCAGATGGAACCATCATT...GTGCACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317133.9
CDS-3UTR TCA 90 bp CTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTGGCCCCTCAAGCAATaGCTAGGTGTGGATTTGATG +
Preference number: 4 (lower is better)
Translates to: LPRPRAHMLFCTITRTQPWPLKQ*LGVDLM
Trigger: CATCAAATCCACACCTAGTCATTGCTTGAGGGGCCA...CGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp AAAACCTGCTCCACGGGCCGGGCTTCCTGCCCAGGACCGCACAGGCTTTCCAGATCGTCCTCATTGGTCTaGTGGAAGTTAAACTTTGCT +
Preference number: 4 (lower is better)
Translates to: KTCSTGRASCPGPHRLSRSSSLV*WKLNFA
Trigger: AGCAAAGTTTAACTTCCAGCAGACCAATGAGGACGA...TCTGGAAAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGTGGAGCAGGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp ACCTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCGCTTCCGTCAGGATCTaGAGCTCAAGCTCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: TCQGPEPTCCSARLPEHSASVRI*SSSSFL
Trigger: GAGGAAAGAGCTTGAGCTGCAGATCCTGACGGAAGC...GCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp CTAGGGCCACACGGAGCAGAAGCAGCTTCCCACCCAAGCACCTCTGAACTGTGCGATCCTGCTGGTTGTTaGACGACACTAATATCCGCT +
Preference number: 4 (lower is better)
Translates to: LGPHGAEAASHPSTSELCDPAGC*TTLISA
Trigger: AGCGGATATTAGTGTCGTGCAACAACCAGCAGGATC...GCACAGTTCAGAGGTGCTTGGGTGGGAAGCTGCTTCTGCTCCGTGTGGCCCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544132.2
CDS-3UTR GCA 90 bp ACCTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCGACGTGACCTTCGTTTaGTTCTGTAGGTGCTCCACC +
Preference number: 4 (lower is better)
Translates to: TCQGPEPTCCSARLPEHSDVTFV*FCRCST
Trigger: GGTGGAGCACCTACAGAAGCAAACGAAGGTCACGTC...GCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp CATCTGAGCCATGACAGTAAGCTCTGCCTTTGGAAAGGAGAGCTCCCACTTCACGGCTTGCTGTCTGCGTaGTTGCTGGACGGAGTGACC +
Preference number: 4 (lower is better)
Translates to: HLSHDSKLCLWKGELPLHGLLSA*LLDGVT
Trigger: GGTCACTCCGTCCAGCAAGCACGCAGACAGCAAGCC...GTGAAGTGGGAGCTCTCCTTTCCAAAGGCAGAGCTTACTGTCATGGCTCAGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp TATCAAGTTCCCACCCCCTTGGGAGGTCACACGGTGAAACAGACACAGTTATATTCAGCGGCGCGGGCTTaGTGTCTGCGTGCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: YQVPTPLGGHTVKQTQLYSAARA*CLRACW
Trigger: CCAGCAAGCACGCAGACAGCAAGCCCGCGCCGCTGA...ATATAACTGTGTCTGTTTCACCGTGTGACCTCCCAAGGGGGTGGGAACTTGATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp TGTGGTCCTGAGTGCACCCCGACTTGGGTCAGGGGTGCCCAGCTTCACCTCAGAGGGGGAAACGTTCCCTaGTTATGCCTATGTTACTTA +
Preference number: 4 (lower is better)
Translates to: CGPECTPTWVRGAQLHLRGGNVP*LCLCYL
Trigger: TAAGTAACATAGGCATAAGCAGGGAACGTTTCCCCC...TCTGAGGTGAAGCTGGGCACCCCTGACCCAAGTCGGGGTGCACTCAGGACCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp CTTTCGGTGAGCACTGAAGCCTGCTGGCTACGGCCAATGGTGGAGGAGACCTCGCAGACGCATTTTTCCTaGTCCCTAAAAAGCCGAGGA +
Preference number: 4 (lower is better)
Translates to: LSVSTEACWLRPMVEETSQTHFS*SLKSRG
Trigger: TCCTCGGCTTTTTAGGGAGCAGGAAAAATGCGTCTG...CGAGGTCTCCTCCACCATTGGCCGTAGCCAGCAGGCTTCAGTGCTCACCGAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp GCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGCACTGTCATTCCTGTCGTTaGAAGCTTTCCCTGATAGAT +
Preference number: 4 (lower is better)
Translates to: AVRWRQALNTRDARPSVHCHSCR*KLSLID
Trigger: ATCTATCAGGGAAAGCTTCCAACGACAGGAATGACA...GTGCACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp CTAGGGCCACACGGAGCAGAAGCAGCTTCCCACCCAAGCACCTCTGAACTGTGCTCCTGCAGATCCTGCTaGTTGTTGCACGACACTAAT +
Preference number: 4 (lower is better)
Translates to: LGPHGAEAASHPSTSELCSCRSC*LLHDTN
Trigger: ATTAGTGTCGTGCAACAACCAGCAGGATCTGCAGGA...GCACAGTTCAGAGGTGCTTGGGTGGGAAGCTGCTTCTGCTCCGTGTGGCCCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544132.2
CDS-3UTR CCA 90 bp CTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGGAGTCTAGGCTTGGTTaGTCATCATCAGCCAAGACG +
Preference number: 4 (lower is better)
Translates to: LPRPRAHMLFCTITRTQPESRLG*SSSAKT
Trigger: CGTCTTGGCTGATGATGACCAACCAAGCCTAGACTC...CGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp AACGAAAACCTGCTCCACGGGCCGGGCTTCCTGCCCAGGACCGCACAGGCTTTCTGGATTCATCAGTCATaGTTTGATCGTCTCCATTCG +
Preference number: 4 (lower is better)
Translates to: NENLLHGPGFLPRTAQAFWIHQS*FDRLHS
Trigger: CGAATGGAGACGATCAAACCATGACTGATGAATCCA...GAAAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGTGGAGCAGGTTTTCGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp TGTGGTCCTGAGTGCACCCCGACTTGGGTCAGGGGTGCCCAGCTTCACCTCAGAGAGATGTTCACAGAGTaGATTGATGTAGCTCAGGTC +
Preference number: 4 (lower is better)
Translates to: CGPECTPTWVRGAQLHLREMFTE*IDVAQV
Trigger: GACCTGAGCTACATCAATCCACTCTGTGAACATCTC...TCTGAGGTGAAGCTGGGCACCCCTGACCCAAGTCGGGGTGCACTCAGGACCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp CCTCTGCACTGGAACACAGTGGGGGAAACGTTCCCTGCTTATGCCTATGTTACTGGCTTCTGCTTCCGGTaGATGCGGGCATGGGACTTC +
Preference number: 4 (lower is better)
Translates to: PLHWNTVGETFPAYAYVTGFCFR*MRAWDF
Trigger: GAAGTCCCATGCCCGCATCCACCGGAAGCAGAAGCC...AGTAACATAGGCATAAGCAGGGAACGTTTCCCCCACTGTGTTCCAGTGCAGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp CCTCTGCACTGGAACACAGTGGGGGAAACGTTCCCTGCTTATGCCTATGTTACTGCTGGCTACGGCCAATaGTGGAGGAGACCTCGGGAT +
Preference number: 4 (lower is better)
Translates to: PLHWNTVGETFPAYAYVTAGYGQ*WRRPRD
Trigger: ATCCCGAGGTCTCCTCCACCATTGGCCGTAGCCAGC...AGTAACATAGGCATAAGCAGGGAACGTTTCCCCCACTGTGTTCCAGTGCAGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp CTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGGAAATCACGGCCACCTaGAATTACAGCCACCCTGAA +
Preference number: 4 (lower is better)
Translates to: LPRPRAHMLFCTITRTQPEITAT*NYSHPE
Trigger: TTCAGGGTGGCTGTAATTCCAGGTGGCCGTGATTTC...CGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp TTTAATGTCATCGCCCTCCCAGTTCCGGATGGCTTCCGTCAGGATCTGCAGCTCCCTCCATGCAGTCTCTaGGTGTGCCTCCACCTTCAT +
Preference number: 4 (lower is better)
Translates to: FNVIALPVPDGFRQDLQLPPCSL*VCLHLH
Trigger: ATGAAGGTGGAGGCACACCCAGAGACTGCATGGAGG...GAGCTGCAGATCCTGACGGAAGCCATCCGGAACTGGGAGGGCGATGACATTAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR TCA 90 bp CATCTGAGCCATGACAGTAAGCTCTGCCTTTGGAAAGGAGAGCTCCCACTTCACAAAGACTTTATGCGGTaGGACGAGGGCCGGGCACAC +
Preference number: 4 (lower is better)
Translates to: HLSHDSKLCLWKGELPLHKDFMR*DEGRAH
Trigger: GTGTGCCCGGCCCTCGTCTCACCGCATAAAGTCTTT...GTGAAGTGGGAGCTCTCCTTTCCAAAGGCAGAGCTTACTGTCATGGCTCAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp CATCTGAGAATCACAGTACTCAGACAGCGGACAAGAGCAAACACCTCTAGGTGGCCTCCGACTCTCTGCTaGGCTTCGGGCAACTTGGTG +
Preference number: 4 (lower is better)
Translates to: HLRITVLRQRTRANTSRWPPTLC*ASGNLV
Trigger: CACCAAGTTGCCCGAAGCTCAGCAGAGAGTCGGAGG...CCACCTAGAGGTGTTTGCTCTTGTCCGCTGTCTGAGTACTGTGATTCTCAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp ACCTCAGAGTTTCTGAAGGACAACAGCAACAACCCGGAGCAGGGGCACGTGTGCGGTTTCCCACAGACGTaGCCTTCGTTTGCTTCTGTA +
Preference number: 4 (lower is better)
Translates to: TSEFLKDNSNNPEQGHVCGFPQT*PSFASV
Trigger: TACAGAAGCAAACGAAGGTCACGTCTGTGGGAAACC...GCACACGTGCCCCTGCTCCGGGTTGTTGCTGTTGTCCTTCAGAAACTCTGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR TCA 90 bp AAAACCTGCTCCACGGGCCGGGCTTCCTGCCCAGGACCGCACAGGCTTTCCAGAAGTAAGATCTCTCTTTaGGGGAAGACAAAACAGTGT +
Preference number: 4 (lower is better)
Translates to: KTCSTGRASCPGPHRLSRSKISL*GKTKQC
Trigger: ACACTGTTTTGTCTTCCCTCAAAGAGAGATCTTACT...TCTGGAAAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGTGGAGCAGGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp TCAGGTCCTCAGAGTCAATCCCTCCTGTCTGGATTCATCAGTCATGGTTTGATCGGCAATGCCGTAACATaGGGCCCTCATGGCCGCACC +
Preference number: 4 (lower is better)
Translates to: SGPQSQSLLSGFISHGLIGNAVT*GPHGRT
Trigger: GGTGCGGCCATGAGGGCCTCATGTTACGGCATTGCC...GATCAAACCATGACTGATGAATCCAGACAGGAGGGATTGACTCTGAGGACCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp CTGGGGACTCGGACAGCAACGCTACCGGCTCCGAGAGGACAGTTAATGTCGCCTTGGGAGGTCACACGGTaGAACAGACACAGTTATATA +
Preference number: 4 (lower is better)
Translates to: LGTRTATLPAPRGQLMSPWEVTR*NRHSYI
Trigger: TATATAACTGTGTCTGTTTCACCGTGTGACCTCCCA...AGGCGACATTAACTGTCCTCTCGGAGCCGGTAGCGTTGCTGTCCGAGTCCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp AAAGTAGAAACAATGGCCCTCTGGATGCCACATCGCCACTGCCACAGGAGAACTGGATGTAGGCTCACGTaGACACACCACCTCCCTCCA +
Preference number: 4 (lower is better)
Translates to: KVETMALWMPHRHCHRRTGCRLT*THHLPP
Trigger: TGGAGGGAGGTGGTGTGTTCACGTGAGCCTACATCC...AGTTCTCCTGTGGCAGTGGCGATGTGGCATCCAGAGGGCCATTGTTTCTACTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp AGAACACAGCCGTTGGAACTGGGCTCACAGCACCTTTGCTGCATATATTCTTCTAGCTCTGAACACACGTaGCGCCCGCCCGTCTGTGCA +
Preference number: 4 (lower is better)
Translates to: RTQPLELGSQHLCCIYSSSSEHT*RPPVCA
Trigger: TGCACAGACGGGCGGGCGTCACGTGTGTTCAGAGCT...AGAAGAATATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp CCTCTACTACAGTCCAGTAGTCTACACTTGCAGAGGCTGAATGCTTCAGCTTTCGGTGGAGACAAGCTCTaGACACACGTGACGCCCGCC +
Preference number: 4 (lower is better)
Translates to: PLLQSSSLHLQRLNASAFGGDKL*THVTPA
Trigger: GGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACC...GAAAGCTGAAGCATTCAGCCTCTGCAAGTGTAGACTACTGGACTGTAGTAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp ACGGTGGAGGCCCTGGTGCTGCGGAACGAACCAGGCATCCACCAGGCTTCTGCTCTACCAGTTGATTGTTaGTATTATCGGTCATGTCCA +
Preference number: 4 (lower is better)
Translates to: TVEALVLRNEPGIHQASALPVDC*YYRSCP
Trigger: TGGACATGACCGATAATAGCAACAATCAACTGGTAG...AGCAGAAGCCTGGTGGATGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCACCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp AGAGCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGCTTCGGGCAACTTGGTaGATTCTTCTAAAGACTGTA +
Preference number: 4 (lower is better)
Translates to: RAVRWRQALNTRDARPSVLRATW*ILLKTV
Trigger: TACAGTCTTTAGAAGAATGCACCAAGTTGCCCGAAG...CACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp CGATTACCAGAACACAGCCGTTGGAACTGGGCTCACAGCACCTTTGCTGCATATCGAGAATCCCAGGGCTaGTGGCACCTTTGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: RLPEHSRWNWAHSTFAAYRESQG*WHLWSP
Trigger: TGGAGACCAAAGGTGCCAGCAGCCCTGGGATTCTCG...ATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp TTACGAAGAGCACCCTCGGATGTAGGCTCACGTGAACACACCACCTCCCTCCAAGCTTCCGTCAGGATCTaGAGCTCAAGCTCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: LRRAPSDVGSREHTTSLQASVRI*SSSSFL
Trigger: GAGGAAAGAGCTTGAGCTGCAGATCCTGACGGAAGC...TTGGAGGGAGGTGGTGTGTTCACGTGAGCCTACATCCGAGGGTGCTCTTCGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp ACGCCCAGCGCATGTGGACAAGCACAGACGCCACTGAGTGTGAAGGAACGAGCTGATCCTGCTGGTTGTTaGACGACACTAATATCCGCT +
Preference number: 4 (lower is better)
Translates to: TPSACGQAQTPLSVKERADPAGC*TTLISA
Trigger: AGCGGATATTAGTGTCGTGCAACAACCAGCAGGATC...AGCTCGTTCCTTCACACTCAGTGGCGTCTGTGCTTGTCCACATGCGCTGGGCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp CCTCTACTACAGTCCAGTAGTCTACACTTGCAGAGGCTGAATGCTTCAGCTTTCCGCGGGCTTGCTGTCTaGGTGCTTGCTGGACGGAGT +
Preference number: 4 (lower is better)
Translates to: PLLQSSSLHLQRLNASAFRGLAV*VLAGRS
Trigger: ACTCCGTCCAGCAAGCACGCAGACAGCAAGCCCGCG...GAAAGCTGAAGCATTCAGCCTCTGCAAGTGTAGACTACTGGACTGTAGTAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp CCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAACTGGGCTCACGCTTCCGTTCAGGTTTaGGCTTGGGCAGCAGCTTTT +
Preference number: 4 (lower is better)
Translates to: PTCCSARLPEHSRWNWAHASVQV*AWAAAF
Trigger: AAAAGCTGCTGCCCAAGCGCAAACCTGAACGGAAGC...GTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp AGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAAGCTTCCGTTCAGGTTTaGGCTTGGGCAGCAGCTTTT +
Preference number: 4 (lower is better)
Translates to: RPRAHMLFCTITRTQPLEASVQV*AWAAAF
Trigger: AAAAGCTGCTGCCCAAGCGCAAACCTGAACGGAAGC...TTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp TCCACCAGGCTTCTGCTTCCGGTGGATGCGGGCATGGGACTTCTTATTCACGTATCTGCTTCCGGTGGATaGGGGCATGGGACTTCTTAT +
Preference number: 4 (lower is better)
Translates to: STRLLLPVDAGMGLLIHVSASGG*GHGTSY
Trigger: ATAAGAAGTCCCATGCCCGCATCCACCGGAAGCAGA...TACGTGAATAAGAAGTCCCATGCCCGCATCCACCGGAAGCAGAAGCCTGGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp CCTCTACTACAGTCCAGTAGTCTACACTTGCAGAGGCTGAATGCTTCAGCTTTCTCCTTCAGCGACGCCTaGAGAAAGCCCTCCGGGTCC +
Preference number: 4 (lower is better)
Translates to: PLLQSSSLHLQRLNASAFSFSDA*RKPSGS
Trigger: GGACCCGGAGGGCTTTCTGCAGGCGTCGCTGAAGGA...GAAAGCTGAAGCATTCAGCCTCTGCAAGTGTAGACTACTGGACTGTAGTAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317133.9
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp CTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGCTTGCAGAGGCTGAATaGTTCAGCTTTCGGGCTTTA +
Preference number: 4 (lower is better)
Translates to: LPRPRAHMLFCTITRTQPLAEAE*FSFRAL
Trigger: TAAAGCCCGAAAGCTGAAGCATTCAGCCTCTGCAAG...CGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp ACCTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCATGCCACATCGCCACTaGCACAGGAGAACTGTCTTT +
Preference number: 4 (lower is better)
Translates to: TCQGPEPTCCSARLPEHSMPHRH*HRRTVF
Trigger: AAAGACAGTTCTCCTGTGGCAGTGGCGATGTGGCAT...GCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp GGACATGTAAGTGACGTTGCCCAGAGTTTTAATGTCATCGCCCTCCCAGTTCCGCATGCCTTTCAACCCTaGAGGCAGGACCTCAGACCC +
Preference number: 4 (lower is better)
Translates to: GHVSDVAQSFNVIALPVPHAFQP*RQDLRP
Trigger: GGGTCTGAGGTCCTGCCTGCAGGGTTGAAAGGCATG...CGGAACTGGGAGGGCGATGACATTAAAACTCTGGGCAACGTCACTTACATGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR CCA 90 bp CAAAGGAGTAACCCTCGGGCAAATCGTGGCCCCTTTAAACGTTTATATCAAGTTCGCGCACGTAGTTGCTaGGGAACCAGCCGGTCCGGC +
Preference number: 4 (lower is better)
Translates to: QRSNPRANRGPFKRLYQVRARSC*GTSRSG
Trigger: GCCGGACCGGCTGGTTCCCCAGCAACTACGTGCGCG...AACTTGATATAAACGTTTAAAGGGGCCACGATTTGCCCGAGGGTTACTCCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp ATCGCCCTCCCAGTTCCGGATGGCTTCCGTCAGGATCTGCAGCTCAAGCTCTTTTCAGTGTTCCTGATTTaGGAGACACAGGCTTCTCGC +
Preference number: 4 (lower is better)
Translates to: IALPVPDGFRQDLQLKLFSVFLI*ETQASR
Trigger: GCGAGAAGCCTGTGTCTCCCAAATCAGGAACACTGA...AAAGAGCTTGAGCTGCAGATCCTGACGGAAGCCATCCGGAACTGGGAGGGCGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR CCA 90 bp CTGGGGACTCGGACAGCAACGCTACCGGCTCCGAGAGGACAGTTAATGTCGCCTTCGTATCAAATCCTTTaGGAGGGCTCTTCAGTGTTC +
Preference number: 4 (lower is better)
Translates to: LGTRTATLPAPRGQLMSPSYQIL*EGSSVF
Trigger: GAACACTGAAGAGCCCTCCCAAAGGATTTGATACGA...AGGCGACATTAACTGTCCTCTCGGAGCCGGTAGCGTTGCTGTCCGAGTCCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp GCGGCAGTGCCGTATGGGCCTTCCTTGAGGTCAAGACTGAGTCTGTCAGCCAGCAACTTAACTTCTCACTaGTCTGCAATGGCCGTAGGT +
Preference number: 4 (lower is better)
Translates to: AAVPYGPSLRSRLSLSASNLTSH*SAMAVG
Trigger: ACCTACGGCCATTGCAGACCAGTGAGAAGTTAAGTT...GCTGGCTGACAGACTCAGTCTTGACCTCAAGGAAGGCCCATACGGCACTGCCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp CATCTGAGCCATGACAGTAAGCTCTGCCTTTGGAAAGGAGAGCTCCCACTTCACCCTCCCAGTTCCGGATaGCTTCCGTCAGGATCTGCA +
Preference number: 4 (lower is better)
Translates to: HLSHDSKLCLWKGELPLHPPSSG*LPSGSA
Trigger: TGCAGATCCTGACGGAAGCCATCCGGAACTGGGAGG...GTGAAGTGGGAGCTCTCCTTTCCAAAGGCAGAGCTTACTGTCATGGCTCAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp ACGCCCAGCGCATGTGGACAAGCACAGACGCCACTGAGTGTGAAGGAACGAGCTTCCTGCAGATCCTGCTaGTTGTTGCACGACACTAAT +
Preference number: 4 (lower is better)
Translates to: TPSACGQAQTPLSVKERASCRSC*LLHDTN
Trigger: ATTAGTGTCGTGCAACAACCAGCAGGATCTGCAGGA...AGCTCGTTCCTTCACACTCAGTGGCGTCTGTGCTTGTCCACATGCGCTGGGCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp CGATTACCAGAACACAGCCGTTGGAACTGGGCTCACAGCACCTTTGCTGCATATTCAGGCTCCAGGGCTTaGGTGTTTTCGGAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: RLPEHSRWNWAHSTFAAYSGSRA*VFSEAP
Trigger: TGGAGCCTCCGAAAACACCCAAGCCCTGGAGCCTGA...ATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp AAAGTAGAAACAATGGCCCTCTGGATGCCACATCGCCACTGCCACAGGAGAACTTCAGGCTCCAGGGCTTaGGTGTTTTCGGAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: KVETMALWMPHRHCHRRTSGSRA*VFSEAP
Trigger: TGGAGCCTCCGAAAACACCCAAGCCCTGGAGCCTGA...AGTTCTCCTGTGGCAGTGGCGATGTGGCATCCAGAGGGCCATTGTTTCTACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp ACCTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCGAGTCTAGGCTTGGTTaGTCATCATCAGCCAAGACG +
Preference number: 4 (lower is better)
Translates to: TCQGPEPTCCSARLPEHSESRLG*SSSAKT
Trigger: CGTCTTGGCTGATGATGACCAACCAAGCCTAGACTC...GCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp TATCAAGTTCCCACCCCCTTGGGAGGTCACACGGTGAAACAGACACAGTTATATATACAGAGAGCAAGGTaGCGCCCCACCCAGCCCTGC +
Preference number: 4 (lower is better)
Translates to: YQVPTPLGGHTVKQTQLYIQRAR*RPTQPC
Trigger: GCAGGGCTGGGTGGGGCGCCACCTTGCTCTCTGTAT...ATATAACTGTGTCTGTTTCACCGTGTGACCTCCCAAGGGGGTGGGAACTTGATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp TGTGGTCCTGAGTGCACCCCGACTTGGGTCAGGGGTGCCCAGCTTCACCTCAGATCAATCCCTCCTGTCTaGATTCATCAGTCATGGTTT +
Preference number: 4 (lower is better)
Translates to: CGPECTPTWVRGAQLHLRSIPPV*IHQSWF
Trigger: AAACCATGACTGATGAATCCAGACAGGAGGGATTGA...TCTGAGGTGAAGCTGGGCACCCCTGACCCAAGTCGGGGTGCACTCAGGACCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp CTGTGGTCACCCTTATTTATTGCTGAAGCAGAACGAAAACCTGCTCCACGGGCCAGCACTGAAGCCTGCTaGCTACGGCCAATGGTGGAG +
Preference number: 4 (lower is better)
Translates to: LWSPLFIAEAERKPAPRASTEAC*LRPMVE
Trigger: CTCCACCATTGGCCGTAGCCAGCAGGCTTCAGTGCT...GGCCCGTGGAGCAGGTTTTCGTTCTGCTTCAGCAATAAATAAGGGTGACCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp TCAGGTCCTCAGAGTCAATCCCTCCTGTCTGGATTCATCAGTCATGGTTTGATCCCAGGTTCTGCAGCATaGGGCAGGTCCACGCTGAGC +
Preference number: 4 (lower is better)
Translates to: SGPQSQSLLSGFISHGLIPGSAA*GRSTLS
Trigger: GCTCAGCGTGGACCTGCCCCATGCTGCAGAACCTGG...GATCAAACCATGACTGATGAATCCAGACAGGAGGGATTGACTCTGAGGACCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp CTGGGGACTCGGACAGCAACGCTACCGGCTCCGAGAGGACAGTTAATGTCGCCTAGCCGAGGAAGATACTaGATCCACAGAAAGAAAAGG +
Preference number: 4 (lower is better)
Translates to: LGTRTATLPAPRGQLMSPSRGRY*IHRKKR
Trigger: CCTTTTCTTTCTGTGGATCCAGTATCTTCCTCGGCT...AGGCGACATTAACTGTCCTCTCGGAGCCGGTAGCGTTGCTGTCCGAGTCCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp TTACGAAGAGCACCCTCGGATGTAGGCTCACGTGAACACACCACCTCCCTCCAACACAGAGCCGTGAGGTaGAGACAAGCTCTGAACACA +
Preference number: 4 (lower is better)
Translates to: LRRAPSDVGSREHTTSLQHRAVR*RQALNT
Trigger: TGTGTTCAGAGCTTGTCTCCACCTCACGGCTCTGTG...TTGGAGGGAGGTGGTGTGTTCACGTGAGCCTACATCCGAGGGTGCTCTTCGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp AGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAAGGTTTGGCGAAGGAGTaGGCAGTGGGGAAGAAAGAA +
Preference number: 4 (lower is better)
Translates to: RPRAHMLFCTITRTQPLEGLAKE*AVGKKE
Trigger: TTCTTTCTTCCCCACTGCCCACTCCTTCGCCAAACC...TTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp AGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAAGATGACGTCTCCTTTTaGGAAGGAAAGCTCGTCCTC +
Preference number: 4 (lower is better)
Translates to: RPRAHMLFCTITRTQPLEDDVSF*EGKLVL
Trigger: GAGGACGAGCTTTCCTTCTCAAAAGGAGACGTCATC...TTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp TTACGAAGAGCACCCTCGGATGTAGGCTCACGTGAACACACCACCTCCCTCCAAGATGACGTCTCCTTTTaGGAAGGAAAGCTCGTCCTC +
Preference number: 4 (lower is better)
Translates to: LRRAPSDVGSREHTTSLQDDVSF*EGKLVL
Trigger: GAGGACGAGCTTTCCTTCTCAAAAGGAGACGTCATC...TTGGAGGGAGGTGGTGTGTTCACGTGAGCCTACATCCGAGGGTGCTCTTCGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp ACAGGCTTCGTCTCCTCTGCACTGGAACACAGTGGGGGAAACGTTCCCTGCTTAGATGACGTCTCCTTTTaGGAAGGAAAGCTCGTCCTC +
Preference number: 4 (lower is better)
Translates to: TGFVSSALEHSGGNVPCLDDVSF*EGKLVL
Trigger: GAGGACGAGCTTTCCTTCTCAAAAGGAGACGTCATC...TAAGCAGGGAACGTTTCCCCCACTGTGTTCCAGTGCAGAGGAGACGAAGCCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp ATCTACAGGATAAGAAATGGCTTCATCTCCTCATCCATACAAGGTGAGAGCAAAAGCCGGTCCGGCCGTTaGGTGTGCCCTCCCACCAGC +
Preference number: 4 (lower is better)
Translates to: IYRIRNGFISSSIQGESKSRSGR*VCPPTS
Trigger: GCTGGTGGGAGGGCACACTCAACGGCCGGACCGGCT...TTTGCTCTCACCTTGTATGGATGAGGAGATGAAGCCATTTCTTATCCTGTAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp AGAACACAGCCGTTGGAACTGGGCTCACAGCACCTTTGCTGCATATATTCTTCTCCTCCGACTCTCTGCTaGGCTTCGGGCAACTTGGTG +
Preference number: 4 (lower is better)
Translates to: RTQPLELGSQHLCCIYSSPPTLC*ASGNLV
Trigger: CACCAAGTTGCCCGAAGCTCAGCAGAGAGTCGGAGG...AGAAGAATATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp CGATTACCAGAACACAGCCGTTGGAACTGGGCTCACAGCACCTTTGCTGCATATCACCTTTGGTCTCCATaGACTCCCCCAACTCCTCAC +
Preference number: 4 (lower is better)
Translates to: RLPEHSRWNWAHSTFAAYHLWSP*TPPTPH
Trigger: GTGAGGAGTTGGGGGAGTTCATGGAGACCAAAGGTG...ATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp CATCTGAGCCATGACAGTAAGCTCTGCCTTTGGAAAGGAGAGCTCCCACTTCACCACCTTTGGTCTCCATaGACTCCCCCAACTCCTCAC +
Preference number: 4 (lower is better)
Translates to: HLSHDSKLCLWKGELPLHHLWSP*TPPTPH
Trigger: GTGAGGAGTTGGGGGAGTTCATGGAGACCAAAGGTG...GTGAAGTGGGAGCTCTCCTTTCCAAAGGCAGAGCTTACTGTCATGGCTCAGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp AAAGTAGAAACAATGGCCCTCTGGATGCCACATCGCCACTGCCACAGGAGAACTCACCTTTGGTCTCCATaGACTCCCCCAACTCCTCAC +
Preference number: 4 (lower is better)
Translates to: KVETMALWMPHRHCHRRTHLWSP*TPPTPH
Trigger: GTGAGGAGTTGGGGGAGTTCATGGAGACCAAAGGTG...AGTTCTCCTGTGGCAGTGGCGATGTGGCATCCAGAGGGCCATTGTTTCTACTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp ACGCCCAGCGCATGTGGACAAGCACAGACGCCACTGAGTGTGAAGGAACGAGCTTTCTTGACATTGGGCTaGAAGGTTTTTGAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: TPSACGQAQTPLSVKERAFLTLG*KVFEGS
Trigger: GCTGCCTTCAAAAACCTTTCAGCCCAATGTCAAGAA...AGCTCGTTCCTTCACACTCAGTGGCGTCTGTGCTTGTCCACATGCGCTGGGCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp CATCTGAGCCATGACAGTAAGCTCTGCCTTTGGAAAGGAGAGCTCCCACTTCACTCACTTCCGGCACACTaGATCAGGACCTGGGACATG +
Preference number: 4 (lower is better)
Translates to: HLSHDSKLCLWKGELPLHSLPAH*IRTWDM
Trigger: CATGTCCCAGGTCCTGATTCAGTGTGCCGGAAGTGA...GTGAAGTGGGAGCTCTCCTTTCCAAAGGCAGAGCTTACTGTCATGGCTCAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp AGAACCGTAAACAGCAACACAACACTCTCCCAAGGTGCCCAGCTCAAAGGCATCTCACTTCCGGCACACTaGATCAGGACCTGGGACATG +
Preference number: 4 (lower is better)
Translates to: RTVNSNTTLSQGAQLKGISLPAH*IRTWDM
Trigger: CATGTCCCAGGTCCTGATTCAGTGTGCCGGAAGTGA...GATGCCTTTGAGCTGGGCACCTTGGGAGAGTGTTGTGTTGCTGTTTACGGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp AAACAATGGCCCTCTGGATGCCACATCGCCACTGCCACAGGAGAACTGTCTTTTTCACTTCCGGCACACTaGATCAGGACCTGGGACATG +
Preference number: 4 (lower is better)
Translates to: KQWPSGCHIATATGELSFSLPAH*IRTWDM
Trigger: CATGTCCCAGGTCCTGATTCAGTGTGCCGGAAGTGA...AAAAGACAGTTCTCCTGTGGCAGTGGCGATGTGGCATCCAGAGGGCCATTGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp CCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAACTGGGCTCACGGTTTCCCACAGACGTaGCCTTCGTTTGCTTCTGTA +
Preference number: 4 (lower is better)
Translates to: PTCCSARLPEHSRWNWAHGFPQT*PSFASV
Trigger: TACAGAAGCAAACGAAGGTCACGTCTGTGGGAAACC...GTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp TCCACCAGGCTTCTGCTTCCGGTGGATGCGGGCATGGGACTTCTTATTCACGTAGGTTTCCCACAGACGTaGCCTTCGTTTGCTTCTGTA +
Preference number: 4 (lower is better)
Translates to: STRLLLPVDAGMGLLIHVGFPQT*PSFASV
Trigger: TACAGAAGCAAACGAAGGTCACGTCTGTGGGAAACC...TACGTGAATAAGAAGTCCCATGCCCGCATCCACCGGAAGCAGAAGCCTGGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp TTACGAAGAGCACCCTCGGATGTAGGCTCACGTGAACACACCACCTCCCTCCAAGGTATGAGATGGCACTaGATGAGGCTTTATGGTGGG +
Preference number: 4 (lower is better)
Translates to: LRRAPSDVGSREHTTSLQGMRWH*MRLYGG
Trigger: CCCACCATAAAGCCTCATTCAGTGCCATCTCATACC...TTGGAGGGAGGTGGTGTGTTCACGTGAGCCTACATCCGAGGGTGCTCTTCGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp AGAGCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGTGCAGTAAGCTTCAATaGCTTTCAGAATCTGAGCAT +
Preference number: 4 (lower is better)
Translates to: RAVRWRQALNTRDARPSVCSKLQ*LSESEH
Trigger: ATGCTCAGATTCTGAAAGTCATTGAAGCTTACTGCA...CACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp ACCTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCTCATCAGCCAAGACGTaGTTATGCATCAGGTCAGTG +
Preference number: 4 (lower is better)
Translates to: TCQGPEPTCCSARLPEHSSSAKT*LCIRSV
Trigger: CACTGACCTGATGCATAATCACGTCTTGGCTGATGA...GCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp GCGGCAGTGCCGTATGGGCCTTCCTTGAGGTCAAGACTGAGTCTGTCAGCCAGCAAATCTGATGCGCAATaGGTTGTTCTGAGACCAGTA +
Preference number: 4 (lower is better)
Translates to: AAVPYGPSLRSRLSLSASKSDAQ*VVLRPV
Trigger: TACTGGTCTCAGAACAACTCATTGCGCATCAGATTT...GCTGGCTGACAGACTCAGTCTTGACCTCAAGGAAGGCCCATACGGCACTGCCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp CTTTCGGTGAGCACTGAAGCCTGCTGGCTACGGCCAATGGTGGAGGAGACCTCGGACAAGAGTTGTTCCTaGGTTAAAACCTGCTACAAC +
Preference number: 4 (lower is better)
Translates to: LSVSTEACWLRPMVEETSDKSCS*VKTCYN
Trigger: GTTGTAGCAGGTTTTAACTCAGGAACAACTCTTGTC...CGAGGTCTCCTCCACCATTGGCCGTAGCCAGCAGGCTTCAGTGCTCACCGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp GCGGCAGTGCCGTATGGGCCTTCCTTGAGGTCAAGACTGAGTCTGTCAGCCAGCGACAAGAGTTGTTCCTaGGTTAAAACCTGCTACAAC +
Preference number: 4 (lower is better)
Translates to: AAVPYGPSLRSRLSLSASDKSCS*VKTCYN
Trigger: GTTGTAGCAGGTTTTAACTCAGGAACAACTCTTGTC...GCTGGCTGACAGACTCAGTCTTGACCTCAAGGAAGGCCCATACGGCACTGCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp CTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGCTGGTGAGAGATATATaGGCAACAGCTCTTACGAGA +
Preference number: 4 (lower is better)
Translates to: LPRPRAHMLFCTITRTQPLVRDI*ATALTR
Trigger: TCTCGTAAGAGCTGTTGCTCATATATCTCTCACCAG...CGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp ACCTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCATGCGAGTGAACATCTaGGCCATGACAGTAAGCTCT +
Preference number: 4 (lower is better)
Translates to: TCQGPEPTCCSARLPEHSMRVNI*AMTVSS
Trigger: AGAGCTTACTGTCATGGCTCAGATGTTCACTCGCAT...GCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp TTACGAAGAGCACCCTCGGATGTAGGCTCACGTGAACACACCACCTCCCTCCAATGGCCCCTCAAGCAATaGCTAGGTGTGGATTTGATG +
Preference number: 4 (lower is better)
Translates to: LRRAPSDVGSREHTTSLQWPLKQ*LGVDLM
Trigger: CATCAAATCCACACCTAGTCATTGCTTGAGGGGCCA...TTGGAGGGAGGTGGTGTGTTCACGTGAGCCTACATCCGAGGGTGCTCTTCGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp AGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAACTCCCAGGACAAGACTaGTACTGCATCAGAGTTCAC +
Preference number: 4 (lower is better)
Translates to: RPRAHMLFCTITRTQPLELPGQD*YCIRVH
Trigger: GTGAACTCTGATGCAGTATCAGTCTTGTCCTGGGAG...TTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp AAAACTCCCCTAAATCAGTCTTCTAGGGCCACACGGAGCAGAAGCAGCTTCCCACAACTGATCACTTGCTaGCAGCTCAGCCACGGGATG +
Preference number: 4 (lower is better)
Translates to: KTPLNQSSRATRSRSSFPQLITC*QLSHGM
Trigger: CATCCCGTGGCTGAGCTGTCAGCAAGTGATCAGTTG...TGGGAAGCTGCTTCTGCTCCGTGTGGCCCTAGAAGACTGATTTAGGGGAGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544132.2
CDS-3UTR GCA 90 bp CCATTAGCTTGTTCCATGCTGAATGAAGCCACCCAACTTTCTAAACAACGTGCTCCTCGCGCACGTAGTTaGTGGGGAACCAGCCGGTCC +
Preference number: 4 (lower is better)
Translates to: PLACSMLNEATQLSKQRAPRARS*WGTSRS
Trigger: GGACCGGCTGGTTCCCCAGCAACTACGTGCGCGAGG...AGCACGTTGTTTAGAAAGTTGGGTGGCTTCATTCAGCATGGAACAAGCTAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp ACCTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCAACTTCTCACTGGTCTaGAATGGCCGTAGGTACGTT +
Preference number: 4 (lower is better)
Translates to: TCQGPEPTCCSARLPEHSNFSLV*NGRRYV
Trigger: AACGTACCTACGGCCATTGCAGACCAGTGAGAAGTT...GCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp AGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAACGTGAGGACATTCACTaGAGAAGGGTGATTGGCACA +
Preference number: 4 (lower is better)
Translates to: RPRAHMLFCTITRTQPLEREDIH*RRVIGT
Trigger: TGTGCCAATCACCCTTCTGCAGTGAATGTCCTCACG...TTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp TCCCAGAGAAGTGAAGAAATGATTGGCATTAAGGAGTCCACACAACCAGGGCAGGGCTTGCTGTCTGCGTaGTTGCTGGACGGAGTGACC +
Preference number: 4 (lower is better)
Translates to: SQRSEEMIGIKESTQPGQGLLSA*LLDGVT
Trigger: GGTCACTCCGTCCAGCAAGCACGCAGACAGCAAGCC...CTGCCCTGGTTGTGTGGACTCCTTAATGCCAATCATTTCTTCACTTCTCTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp AAACAATGGCCCTCTGGATGCCACATCGCCACTGCCACAGGAGAACTGTCTTTTAACGAGAAAGGCTACTaGGACGCCCCAGGGAGTCTA +
Preference number: 4 (lower is better)
Translates to: KQWPSGCHIATATGELSFNEKGY*DAPGSL
Trigger: TAGACTCCCTGGGGCGTCGCAGTAGCCTTTCTCGTT...AAAAGACAGTTCTCCTGTGGCAGTGGCGATGTGGCATCCAGAGGGCCATTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp AACGAAAACCTGCTCCACGGGCCGGGCTTCCTGCCCAGGACCGCACAGGCTTTCGAACCACCACAGGTATaGATTCAAAATGGGATATTT +
Preference number: 4 (lower is better)
Translates to: NENLLHGPGFLPRTAQAFEPPQV*IQNGIF
Trigger: AAATATCCCATTTTGAATGCATACCTGTGGTGGTTC...GAAAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGTGGAGCAGGTTTTCGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp ACGGTGGAGGCCCTGGTGCTGCGGAACGAACCAGGCATCCACCAGGCTTCTGCTGAACCACCACAGGTATaGATTCAAAATGGGATATTT +
Preference number: 4 (lower is better)
Translates to: TVEALVLRNEPGIHQASAEPPQV*IQNGIF
Trigger: AAATATCCCATTTTGAATGCATACCTGTGGTGGTTC...AGCAGAAGCCTGGTGGATGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCACCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp CCTCTGCACTGGAACACAGTGGGGGAAACGTTCCCTGCTTATGCCTATGTTACTTGTCAGCCAGCAAGTTaGCCTCAGAAACCCGCAGGT +
Preference number: 4 (lower is better)
Translates to: PLHWNTVGETFPAYAYVTCQPAS*PQKPAG
Trigger: ACCTGCGGGTTTCTGAGGGCAACTTGCTGGCTGACA...AGTAACATAGGCATAAGCAGGGAACGTTTCCCCCACTGTGTTCCAGTGCAGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp TGTGGTCCTGAGTGCACCCCGACTTGGGTCAGGGGTGCCCAGCTTCACCTCAGAAACGTTCCCTGCTTATaGCTATGTTACTTAGTGGAA +
Preference number: 4 (lower is better)
Translates to: CGPECTPTWVRGAQLHLRNVPCL*LCYLVE
Trigger: TTCCACTAAGTAACATAGGCATAAGCAGGGAACGTT...TCTGAGGTGAAGCTGGGCACCCCTGACCCAAGTCGGGGTGCACTCAGGACCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp CCTGCTACAACAGCAAACTCCAATAAACTCAAGTTGAATGGTTTCCCACTGCAAACGGGCCGGGCTTCCTaGCCAGGACCGCACAGGCTT +
Preference number: 4 (lower is better)
Translates to: PATTANSNKLKLNGFPLQTGRAS*PGPHRL
Trigger: AAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGT...TTGCAGTGGGAAACCATTCAACTTGAGTTTATTGGAGTTTGCTGTTGTAGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp CTGTGGTCACCCTTATTTATTGCTGAAGCAGAACGAAAACCTGCTCCACGGGCCGAAGCCAAAGGGGCTTaGTGGGCACCAGAGACTGTA +
Preference number: 4 (lower is better)
Translates to: LWSPLFIAEAERKPAPRAEAKGA*WAPETV
Trigger: TACAGTCTCTGGTGCCCAGCAAGCCCCTTTGGCTTC...GGCCCGTGGAGCAGGTTTTCGTTCTGCTTCAGCAATAAATAAGGGTGACCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp AAACAATGGCCCTCTGGATGCCACATCGCCACTGCCACAGGAGAACTGTCTTTTGGCCCAGAGCCCACATaGTGTTCTGCACGATTACCA +
Preference number: 4 (lower is better)
Translates to: KQWPSGCHIATATGELSFGPEPT*CSARLP
Trigger: TGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCC...AAAAGACAGTTCTCCTGTGGCAGTGGCGATGTGGCATCCAGAGGGCCATTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp GTGGGGAAGAAAGAAATCACGGCCACCTGGAATTACAGCCACCCTGAAGAAGGAGGCCCAGAGCCCACATaGTGTTCTGCACGATTACCA +
Preference number: 4 (lower is better)
Translates to: VGKKEITATWNYSHPEEGGPEPT*CSARLP
Trigger: TGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCC...TCCTTCTTCAGGGTGGCTGTAATTCCAGGTGGCCGTGATTTCTTTCTTCCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp ACCTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCTTGCAGAGGCTGAATaGTTCAGCTTTCGGGCTTTA +
Preference number: 4 (lower is better)
Translates to: TCQGPEPTCCSARLPEHSLAEAE*FSFRAL
Trigger: TAAAGCCCGAAAGCTGAAGCATTCAGCCTCTGCAAG...GCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp GCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGCACACAGGTCACATTCAGTaGTTTTTGAAGCAGAAATTG +
Preference number: 4 (lower is better)
Translates to: AVRWRQALNTRDARPSVHTGHIQ*FLKQKL
Trigger: CAATTTCTGCTTCAAAAAGCACTGAATGTGACCTGT...GTGCACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp CCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAACTGGGCTCACCATAAACCCCATCTCTaGCGGAGATTAACACTGGGC +
Preference number: 4 (lower is better)
Translates to: PTCCSARLPEHSRWNWAHHKPHL*RRLTLG
Trigger: GCCCAGTGTTAATCTCCGGCAGAGATGGGGTTTATG...GTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp GCGGGCATGGGACTTCTTATTCACGTAGCTGGAAAGGACATTCTAGCATGGGGACAAAAGAATGCCTCCTaGCTCCATGGTAGCGCTGGC +
Preference number: 4 (lower is better)
Translates to: AGMGLLIHVAGKDILAWGQKNAS*LHGSAG
Trigger: GCCAGCGCTACCATGGAGGCAGGAGGCATTCTTTTG...TCCCCATGCTAGAATGTCCTTTCCAGCTACGTGAATAAGAAGTCCCATGCCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426073.6
CDS-3UTR CCA 90 bp CCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAACTGGGCTCACTCCACACGGGTGACATaGATGACGTCTCCTTTTGAG +
Preference number: 4 (lower is better)
Translates to: PTCCSARLPEHSRWNWAHSTRVT*MTSPFE
Trigger: CTCAAAAGGAGACGTCATCCATGTCACCCGTGTGGA...GTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp CCTGCTACAACAGCAAACTCCAATAAACTCAAGTTGAATGGTTTCCCACTGCAACGCGCACGTAGTTGCTaGGGAACCAGCCGGTCCGGC +
Preference number: 4 (lower is better)
Translates to: PATTANSNKLKLNGFPLQRARSC*GTSRSG
Trigger: GCCGGACCGGCTGGTTCCCCAGCAACTACGTGCGCG...TTGCAGTGGGAAACCATTCAACTTGAGTTTATTGGAGTTTGCTGTTGTAGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp CTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTCGTATCAAATCCTTTaGGAGGGCTCTTCAGTGTTC +
Preference number: 4 (lower is better)
Translates to: LPRPRAHMLFCTITRTQPSYQIL*EGSSVF
Trigger: GAACACTGAAGAGCCCTCCCAAAGGATTTGATACGA...CGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp CTTTCGGTGAGCACTGAAGCCTGCTGGCTACGGCCAATGGTGGAGGAGACCTCGTGTCATTCCTGTCGTTaGAAGCTTTCCCTGATAGAT +
Preference number: 4 (lower is better)
Translates to: LSVSTEACWLRPMVEETSCHSCR*KLSLID
Trigger: ATCTATCAGGGAAAGCTTCCAACGACAGGAATGACA...CGAGGTCTCCTCCACCATTGGCCGTAGCCAGCAGGCTTCAGTGCTCACCGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp TCCACCAGGCTTCTGCTTCCGGTGGATGCGGGCATGGGACTTCTTATTCACGTACTGAATGAGGCTTTATaGTGGGGTTTCCCACAGACG +
Preference number: 4 (lower is better)
Translates to: STRLLLPVDAGMGLLIHVLNEAL*WGFPQT
Trigger: CGTCTGTGGGAAACCCCACCATAAAGCCTCATTCAG...TACGTGAATAAGAAGTCCCATGCCCGCATCCACCGGAAGCAGAAGCCTGGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp CCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAACTGGGCTCACCTGAATGAGGCTTTATaGTGGGGTTTCCCACAGACG +
Preference number: 4 (lower is better)
Translates to: PTCCSARLPEHSRWNWAHLNEAL*WGFPQT
Trigger: CGTCTGTGGGAAACCCCACCATAAAGCCTCATTCAG...GTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp TTTAATGTCATCGCCCTCCCAGTTCCGGATGGCTTCCGTCAGGATCTGCAGCTCCTGAATGAGGCTTTATaGTGGGGTTTCCCACAGACG +
Preference number: 4 (lower is better)
Translates to: FNVIALPVPDGFRQDLQLLNEAL*WGFPQT
Trigger: CGTCTGTGGGAAACCCCACCATAAAGCCTCATTCAG...GAGCTGCAGATCCTGACGGAAGCCATCCGGAACTGGGAGGGCGATGACATTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR CCA 90 bp CCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAACTGGGCTCACGAGTCTAGGCTTGGTTaGTCATCATCAGCCAAGACG +
Preference number: 4 (lower is better)
Translates to: PTCCSARLPEHSRWNWAHESRLG*SSSAKT
Trigger: CGTCTTGGCTGATGATGACCAACCAAGCCTAGACTC...GTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp GCGGCAGTGCCGTATGGGCCTTCCTTGAGGTCAAGACTGAGTCTGTCAGCCAGCTCAATCCCTCCTGTCTaGATTCATCAGTCATGGTTT +
Preference number: 4 (lower is better)
Translates to: AAVPYGPSLRSRLSLSASSIPPV*IHQSWF
Trigger: AAACCATGACTGATGAATCCAGACAGGAGGGATTGA...GCTGGCTGACAGACTCAGTCTTGACCTCAAGGAAGGCCCATACGGCACTGCCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp TTTGTTGTTACTGAACTAGCCTATACAGAACCGTCTGTGTCCTCCCAAAACGCAGCACGGTGGAGGCCCTaGTGCTGCGGAACGAACCAG +
Preference number: 4 (lower is better)
Translates to: FVVTELAYTEPSVSSQNAARWRP*CCGTNQ
Trigger: CTGGTTCGTTCCGCAGCACCAGGGCCTCCACCGTGC...TGCGTTTTGGGAGGACACAGACGGTTCTGTATAGGCTAGTTCAGTAACAACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp GCGGGCATGGGACTTCTTATTCACGTAGCTGGAAAGGACATTCTAGCATGGGGATCGTCTCCTCTGCACTaGAACACAGTGGGGGAAACG +
Preference number: 4 (lower is better)
Translates to: AGMGLLIHVAGKDILAWGSSPLH*NTVGET
Trigger: CGTTTCCCCCACTGTGTTCCAGTGCAGAGGAGACGA...TCCCCATGCTAGAATGTCCTTTCCAGCTACGTGAATAAGAAGTCCCATGCCCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp TCCCAGAGAAGTGAAGAAATGATTGGCATTAAGGAGTCCACACAACCAGGGCAGAACATGAGGCCCTCATaGCCGCACCGTCCAGGGGAA +
Preference number: 4 (lower is better)
Translates to: SQRSEEMIGIKESTQPGQNMRPS*PHRPGE
Trigger: TTCCCCTGGACGGTGCGGCCATGAGGGCCTCATGTT...CTGCCCTGGTTGTGTGGACTCCTTAATGCCAATCATTTCTTCACTTCTCTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp TATCAAGTTCCCACCCCCTTGGGAGGTCACACGGTGAAACAGACACAGTTATATGACGCCCAGCGCATGTaGACAAGCACAGACGCCACT +
Preference number: 4 (lower is better)
Translates to: YQVPTPLGGHTVKQTQLYDAQRM*TSTDAT
Trigger: AGTGGCGTCTGTGCTTGTCCACATGCGCTGGGCGTC...ATATAACTGTGTCTGTTTCACCGTGTGACCTCCCAAGGGGGTGGGAACTTGATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp CCTCTGCACTGGAACACAGTGGGGGAAACGTTCCCTGCTTATGCCTATGTTACTTGTCAACAGGCGCCCTaGGTGTCCCAGAGAAGTGAA +
Preference number: 4 (lower is better)
Translates to: PLHWNTVGETFPAYAYVTCQQAP*VSQRSE
Trigger: TTCACTTCTCTGGGACACCCAGGGCGCCTGTTGACA...AGTAACATAGGCATAAGCAGGGAACGTTTCCCCCACTGTGTTCCAGTGCAGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp AGAACCGTAAACAGCAACACAACACTCTCCCAAGGTGCCCAGCTCAAAGGCATCTGTCAACAGGCGCCCTaGGTGTCCCAGAGAAGTGAA +
Preference number: 4 (lower is better)
Translates to: RTVNSNTTLSQGAQLKGICQQAP*VSQRSE
Trigger: TTCACTTCTCTGGGACACCCAGGGCGCCTGTTGACA...GATGCCTTTGAGCTGGGCACCTTGGGAGAGTGTTGTGTTGCTGTTTACGGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp TTACGAAGAGCACCCTCGGATGTAGGCTCACGTGAACACACCACCTCCCTCCAACCAGAGTCTCCTCCATaGTTCTGGCACTTAGATCAC +
Preference number: 4 (lower is better)
Translates to: LRRAPSDVGSREHTTSLQPESPP*FWHLDH
Trigger: GTGATCTAAGTGCCAGAACCATGGAGGAGACTCTGG...TTGGAGGGAGGTGGTGTGTTCACGTGAGCCTACATCCGAGGGTGCTCTTCGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp CGATTACCAGAACACAGCCGTTGGAACTGGGCTCACAGCACCTTTGCTGCATATCACAGCCGTTGGAACTaGGCTCACAGCACCTTTGCT +
Preference number: 4 (lower is better)
Translates to: RLPEHSRWNWAHSTFAAYHSRWN*AHSTFA
Trigger: AGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTG...ATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp CTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGCAATTCAGGGAAGTTTaGGGTGAAGATGCGAGTGAA +
Preference number: 4 (lower is better)
Translates to: LPRPRAHMLFCTITRTQPQFREV*GEDASE
Trigger: TTCACTCGCATCTTCACCCCAAACTTCCCTGAATTG...CGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp GAACTGTGCGTGAGGAGGCACAATTCAGGGTTGTTTCTCGAGAACACTCATTGGGCCACGCCTGGAGTCTaGAAGGAGGAGAAGCACCAA +
Preference number: 4 (lower is better)
Translates to: ELCVRRHNSGLFLENTHWATPGV*KEEKHQ
Trigger: TTGGTGCTTCTCCTCCTTCCAGACTCCAGGCGTGGC...CCAATGAGTGTTCTCGAGAAACAACCCTGAATTGTGCCTCCTCACGCACAGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544132.2
3UTR CAA 72 bp AGGTGCTCCACCCATTCCTGCAGATCCTGCTGGTTGTaGCACGACACTAATATCCGCTCAATCATGCTCCCT +
Preference number: 4 (lower is better)
Translates to: RCSTHSCRSCWL*HDTNIRSIMLP
Trigger: AGGGAGCATGATTGAGCGGATATTAGTGTCGTGCAACAACCAGCAGGATCTGCAGGAATGGGTGGAGCACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR TCA 90 bp CCTCTACTACAGTCCAGTAGTCTACACTTGCAGAGGCTGAATGCTTCAGCTTTCAAAGACTTTATGCGGTaGGACGAGGGCCGGGCACAC +
Preference number: 4 (lower is better)
Translates to: PLLQSSSLHLQRLNASAFKDFMR*DEGRAH
Trigger: GTGTGCCCGGCCCTCGTCTCACCGCATAAAGTCTTT...GAAAGCTGAAGCATTCAGCCTCTGCAAGTGTAGACTACTGGACTGTAGTAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp ACATCTAAGAAAAGCAGGCTGCGATACAACAAGCATTTGTTAAGAAAAGCTCAGAGCCGGTCCGGCCGTTaGGTGTGCCCTCCCACCAGC +
Preference number: 4 (lower is better)
Translates to: TSKKSRLRYNKHLLRKAQSRSGR*VCPPTS
Trigger: GCTGGTGGGAGGGCACACTCAACGGCCGGACCGGCT...CTGAGCTTTTCTTAACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp ACCTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCTTCTTGACATTGGGCTaGAAGGTTTTTGAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: TCQGPEPTCCSARLPEHSFLTLG*KVFEGS
Trigger: GCTGCCTTCAAAAACCTTTCAGCCCAATGTCAAGAA...GCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp AGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAACTCTTCCGGACTTCTTaGCATTGGGCTGAAAGGTTT +
Preference number: 4 (lower is better)
Translates to: RPRAHMLFCTITRTQPLELFRTS*HWAERF
Trigger: AAACCTTTCAGCCCAATGTCAAGAAGTCCGGAAGAG...TTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp TTGATGCTACAACTGAATGCAACAGGTCACATTCAGTGCTTTTTGAAGCAGAAAGCTTGCTGGACGGAGTaGCCGGGTGGGAGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: LMLQLNATGHIQCFLKQKACWTE*PGGRGG
Trigger: CCCTCCCCTCCCACCCGGTCACTCCGTCCAGCAAGC...TTTCTGCTTCAAAAAGCACTGAATGTGACCTGTTGCATTCAGTTGTAGCATCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp ACATCTAAGAAAAGCAGGCTGCGATACAACAAGCATTTGTTAAGAAAAGCTCAGGCTTGCTGGACGGAGTaGCCGGGTGGGAGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: TSKKSRLRYNKHLLRKAQACWTE*PGGRGG
Trigger: CCCTCCCCTCCCACCCGGTCACTCCGTCCAGCAAGC...CTGAGCTTTTCTTAACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
ENST00000478679.5
CDS-3UTR TCA 90 bp AGAACCGTAAACAGCAACACAACACTCTCCCAAGGTGCCCAGCTCAAAGGCATCCGCGAACTCCTCATCTaGAGGCTTCCGTTCAGGTTT +
Preference number: 4 (lower is better)
Translates to: RTVNSNTTLSQGAQLKGIRELLI*RLPFRF
Trigger: AAACCTGAACGGAAGCCTTCAGATGAGGAGTTCGCG...GATGCCTTTGAGCTGGGCACCTTGGGAGAGTGTTGTGTTGCTGTTTACGGTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp CGATTACCAGAACACAGCCGTTGGAACTGGGCTCACAGCACCTTTGCTGCATATCGCGAACTCCTCATCTaGAGGCTTCCGTTCAGGTTT +
Preference number: 4 (lower is better)
Translates to: RLPEHSRWNWAHSTFAAYRELLI*RLPFRF
Trigger: AAACCTGAACGGAAGCCTTCAGATGAGGAGTTCGCG...ATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp AAAGTAGAAACAATGGCCCTCTGGATGCCACATCGCCACTGCCACAGGAGAACTCGCGAACTCCTCATCTaGAGGCTTCCGTTCAGGTTT +
Preference number: 4 (lower is better)
Translates to: KVETMALWMPHRHCHRRTRELLI*RLPFRF
Trigger: AAACCTGAACGGAAGCCTTCAGATGAGGAGTTCGCG...AGTTCTCCTGTGGCAGTGGCGATGTGGCATCCAGAGGGCCATTGTTTCTACTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp CTGGGGACTCGGACAGCAACGCTACCGGCTCCGAGAGGACAGTTAATGTCGCCTATGACTTTCAGAATCTaGGCATCTTCTTCCAAAGCA +
Preference number: 4 (lower is better)
Translates to: LGTRTATLPAPRGQLMSPMTFRI*ASSSKA
Trigger: TGCTTTGGAAGAAGATGCTCAGATTCTGAAAGTCAT...AGGCGACATTAACTGTCCTCTCGGAGCCGGTAGCGTTGCTGTCCGAGTCCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp AAAGTAGAAACAATGGCCCTCTGGATGCCACATCGCCACTGCCACAGGAGAACTGTCTTCCGAGAGGTCTaGAGGCTCCAAACGAGAAAG +
Preference number: 4 (lower is better)
Translates to: KVETMALWMPHRHCHRRTVFREV*RLQTRK
Trigger: CTTTCTCGTTTGGAGCCTTCAGACCTCTCGGAAGAC...AGTTCTCCTGTGGCAGTGGCGATGTGGCATCCAGAGGGCCATTGTTTCTACTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp GCGGGCATGGGACTTCTTATTCACGTAGCTGGAAAGGACATTCTAGCATGGGGAGGATTTTACTTTCGGTaGGCACTGAAGCCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: AGMGLLIHVAGKDILAWGGFYFR*ALKPAG
Trigger: GCCAGCAGGCTTCAGTGCTCACCGAAAGTAAAATCC...TCCCCATGCTAGAATGTCCTTTCCAGCTACGTGAATAAGAAGTCCCATGCCCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp AGGGGAAGGGCTGTTAAAAACACAAGTATTCTTGTGAAATACTTCGATCTGAGCCCCAGCGAGCCGCGGTaGGGACAGGCTTCGTCTCCT +
Preference number: 4 (lower is better)
Translates to: RGRAVKNTSILVKYFDLSPSEPR*GQASSP
Trigger: AGGAGACGAAGCCTGTCCTCACCGCGGCTCGCTGGG...GCTCAGATCGAAGTATTTCACAAGAATACTTGTGTTTTTAACAGCCCTTCCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp ACGCCCAGCGCATGTGGACAAGCACAGACGCCACTGAGTGTGAAGGAACGAGCTTCAGAGAGTCAAATCTaGTGCGCAATGAGTTGTTCT +
Preference number: 4 (lower is better)
Translates to: TPSACGQAQTPLSVKERASESQI*CAMSCS
Trigger: AGAACAACTCATTGCGCATCAGATTTGACTCTCTGA...AGCTCGTTCCTTCACACTCAGTGGCGTCTGTGCTTGTCCACATGCGCTGGGCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp GCGGCAGTGCCGTATGGGCCTTCCTTGAGGTCAAGACTGAGTCTGTCAGCCAGCCCAATAAACTCAAGTTaGATGGTTTCCCACTGCAAT +
Preference number: 4 (lower is better)
Translates to: AAVPYGPSLRSRLSLSASPINSS*MVSHCN
Trigger: ATTGCAGTGGGAAACCATTCAACTTGAGTTTATTGG...GCTGGCTGACAGACTCAGTCTTGACCTCAAGGAAGGCCCATACGGCACTGCCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp ACCTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCTGGTGAGAGATATATaGGCAACAGCTCTTACGAGA +
Preference number: 4 (lower is better)
Translates to: TCQGPEPTCCSARLPEHSLVRDI*ATALTR
Trigger: TCTCGTAAGAGCTGTTGCTCATATATCTCTCACCAG...GCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp GCTTGTTCCATGCTGAATGAAGCCACCCAACTTTCTAAACAACGTGCTACTGCCGGATGTAGGCTCACGTaGACACACCACCTCCCTCCA +
Preference number: 4 (lower is better)
Translates to: ACSMLNEATQLSKQRATAGCRLT*THHLPP
Trigger: TGGAGGGAGGTGGTGTGTTCACGTGAGCCTACATCC...GGCAGTAGCACGTTGTTTAGAAAGTTGGGTGGCTTCATTCAGCATGGAACAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp CCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAACTGGGCTCACATGCGAGTGAACATCTaGGCCATGACAGTAAGCTCT +
Preference number: 4 (lower is better)
Translates to: PTCCSARLPEHSRWNWAHMRVNI*AMTVSS
Trigger: AGAGCTTACTGTCATGGCTCAGATGTTCACTCGCAT...GTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp GAACTGTGCGTGAGGAGGCACAATTCAGGGTTGTTTCTCGAGAACACTCATTGGCCTCTGAACTGTGCGTaGGGAGGCACAATTCAGGGT +
Preference number: 4 (lower is better)
Translates to: ELCVRRHNSGLFLENTHWPLNCA*GGTIQG
Trigger: ACCCTGAATTGTGCCTCCTCACGCACAGTTCAGAGG...CCAATGAGTGTTCTCGAGAAACAACCCTGAATTGTGCCTCCTCACGCACAGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544132.2
CDS-3UTR GCA 90 bp ACGGTGGAGGCCCTGGTGCTGCGGAACGAACCAGGCATCCACCAGGCTTCTGCTCTGGAAGTTAAACTTTaGTCTTACTACCAGTTGATT +
Preference number: 4 (lower is better)
Translates to: TVEALVLRNEPGIHQASALEVKL*SYYQLI
Trigger: AATCAACTGGTAGTAAGAGCAAAGTTTAACTTCCAG...AGCAGAAGCCTGGTGGATGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCACCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp GCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGCACCTGGAAGTTAAACTTTaGTCTTACTACCAGTTGATT +
Preference number: 4 (lower is better)
Translates to: AVRWRQALNTRDARPSVHLEVKL*SYYQLI
Trigger: AATCAACTGGTAGTAAGAGCAAAGTTTAACTTCCAG...GTGCACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp AAAGGAAACCAAAAGCAAAGTCCCTGTGGTCACCCTTATTTATTGCTGAAGCAGCCTCGCGCACGTAGTTaGTGGGGAACCAGCCGGTCC +
Preference number: 4 (lower is better)
Translates to: KGNQKQSPCGHPYLLLKQPRARS*WGTSRS
Trigger: GGACCGGCTGGTTCCCCAGCAACTACGTGCGCGAGG...CTGCTTCAGCAATAAATAAGGGTGACCACAGGGACTTTGCTTTTGGTTTCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp CAGAGTTTTAATGTCATCGCCCTCCCAGTTCCGGATGGCTTCCGTCAGGATCTGCGTGAGGACATTCACTaGAGAAGGGTGATTGGCACA +
Preference number: 4 (lower is better)
Translates to: QSFNVIALPVPDGFRQDLREDIH*RRVIGT
Trigger: TGTGCCAATCACCCTTCTGCAGTGAATGTCCTCACG...CAGATCCTGACGGAAGCCATCCGGAACTGGGAGGGCGATGACATTAAAACTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR GCA 90 bp CCTCTGCACTGGAACACAGTGGGGGAAACGTTCCCTGCTTATGCCTATGTTACTGCTTCCGTCAGGATCTaGAGCTCAAGCTCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: PLHWNTVGETFPAYAYVTASVRI*SSSSFL
Trigger: GAGGAAAGAGCTTGAGCTGCAGATCCTGACGGAAGC...AGTAACATAGGCATAAGCAGGGAACGTTTCCCCCACTGTGTTCCAGTGCAGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp GTGGGGAAGAAAGAAATCACGGCCACCTGGAATTACAGCCACCCTGAAGAAGGAGCTTCCGTCAGGATCTaGAGCTCAAGCTCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: VGKKEITATWNYSHPEEGASVRI*SSSSFL
Trigger: GAGGAAAGAGCTTGAGCTGCAGATCCTGACGGAAGC...TCCTTCTTCAGGGTGGCTGTAATTCCAGGTGGCCGTGATTTCTTTCTTCCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp AGAGCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGATATCCGCTCAATCATaGTCCCTGATATTTCAAATG +
Preference number: 4 (lower is better)
Translates to: RAVRWRQALNTRDARPSVISAQS*SLIFQM
Trigger: CATTTGAAATATCAGGGAGCATGATTGAGCGGATAT...CACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp TCCACCAGGCTTCTGCTTCCGGTGGATGCGGGCATGGGACTTCTTATTCACGTAGATCCTGCTGGTTGTTaGACGACACTAATATCCGCT +
Preference number: 4 (lower is better)
Translates to: STRLLLPVDAGMGLLIHVDPAGC*TTLISA
Trigger: AGCGGATATTAGTGTCGTGCAACAACCAGCAGGATC...TACGTGAATAAGAAGTCCCATGCCCGCATCCACCGGAAGCAGAAGCCTGGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp CATCTGAGCCATGACAGTAAGCTCTGCCTTTGGAAAGGAGAGCTCCCACTTCACGACGTGACCTTCGTTTaGTTCTGTAGGTGCTCCACC +
Preference number: 4 (lower is better)
Translates to: HLSHDSKLCLWKGELPLHDVTFV*FCRCST
Trigger: GGTGGAGCACCTACAGAAGCAAACGAAGGTCACGTC...GTGAAGTGGGAGCTCTCCTTTCCAAAGGCAGAGCTTACTGTCATGGCTCAGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp AGAACCGTAAACAGCAACACAACACTCTCCCAAGGTGCCCAGCTCAAAGGCATCGACGTGACCTTCGTTTaGTTCTGTAGGTGCTCCACC +
Preference number: 4 (lower is better)
Translates to: RTVNSNTTLSQGAQLKGIDVTFV*FCRCST
Trigger: GGTGGAGCACCTACAGAAGCAAACGAAGGTCACGTC...GATGCCTTTGAGCTGGGCACCTTGGGAGAGTGTTGTGTTGCTGTTTACGGTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp CGATTACCAGAACACAGCCGTTGGAACTGGGCTCACAGCACCTTTGCTGCATATGACGTGACCTTCGTTTaGTTCTGTAGGTGCTCCACC +
Preference number: 4 (lower is better)
Translates to: RLPEHSRWNWAHSTFAAYDVTFV*FCRCST
Trigger: GGTGGAGCACCTACAGAAGCAAACGAAGGTCACGTC...ATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp GGACATGTAAGTGACGTTGCCCAGAGTTTTAATGTCATCGCCCTCCCAGTTCCGGACGTGACCTTCGTTTaGTTCTGTAGGTGCTCCACC +
Preference number: 4 (lower is better)
Translates to: GHVSDVAQSFNVIALPVPDVTFV*FCRCST
Trigger: GGTGGAGCACCTACAGAAGCAAACGAAGGTCACGTC...CGGAACTGGGAGGGCGATGACATTAAAACTCTGGGCAACGTCACTTACATGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR GCA 90 bp GTGGGGAAGAAAGAAATCACGGCCACCTGGAATTACAGCCACCCTGAAGAAGGAGCTTCCGTTCAGGTTTaGGCTTGGGCAGCAGCTTTT +
Preference number: 4 (lower is better)
Translates to: VGKKEITATWNYSHPEEGASVQV*AWAAAF
Trigger: AAAAGCTGCTGCCCAAGCGCAAACCTGAACGGAAGC...TCCTTCTTCAGGGTGGCTGTAATTCCAGGTGGCCGTGATTTCTTTCTTCCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp CTTCTTATTCACGTAGCTGGAAAGGACATTCTAGCATGGGGATTAGCCCGGACAGACTTGGGTCAGGGGTaGCCAGCTTCACCTCAGAAC +
Preference number: 4 (lower is better)
Translates to: LLIHVAGKDILAWGLARTDLGQG*PASPQN
Trigger: GTTCTGAGGTGAAGCTGGGCACCCCTGACCCAAGTC...TGTCCGGGCTAATCCCCATGCTAGAATGTCCTTTCCAGCTACGTGAATAAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp GCGGGCATGGGACTTCTTATTCACGTAGCTGGAAAGGACATTCTAGCATGGGGATCTGCTTCCGGTGGATaGGGGCATGGGACTTCTTAT +
Preference number: 4 (lower is better)
Translates to: AGMGLLIHVAGKDILAWGSASGG*GHGTSY
Trigger: ATAAGAAGTCCCATGCCCGCATCCACCGGAAGCAGA...TCCCCATGCTAGAATGTCCTTTCCAGCTACGTGAATAAGAAGTCCCATGCCCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp GTGTATTTTGTTGTTACTGAACTAGCCTATACAGAACCGTCTGTGTCCTCCCAACGGTGGAGGCCCTGGTaGTGCGGAACGAACCAGGCA +
Preference number: 4 (lower is better)
Translates to: VYFVVTELAYTEPSVSSQRWRPW*CGTNQA
Trigger: TGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCACCG...TTGGGAGGACACAGACGGTTCTGTATAGGCTAGTTCAGTAACAACAAAATACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp CCTGCTACAACAGCAAACTCCAATAAACTCAAGTTGAATGGTTTCCCACTGCAACGGTGGAGGCCCTGGTaGTGCGGAACGAACCAGGCA +
Preference number: 4 (lower is better)
Translates to: PATTANSNKLKLNGFPLQRWRPW*CGTNQA
Trigger: TGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCACCG...TTGCAGTGGGAAACCATTCAACTTGAGTTTATTGGAGTTTGCTGTTGTAGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp AGAACCGTAAACAGCAACACAACACTCTCCCAAGGTGCCCAGCTCAAAGGCATCCCATCAGTATCAGCCTaGAGCATGGCCTCCATCTGT +
Preference number: 4 (lower is better)
Translates to: RTVNSNTTLSQGAQLKGIPSVSA*SMASIC
Trigger: ACAGATGGAGGCCATGCTGCAGGCTGATACTGATGG...GATGCCTTTGAGCTGGGCACCTTGGGAGAGTGTTGTGTTGCTGTTTACGGTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp TCAGGTCCTCAGAGTCAATCCCTCCTGTCTGGATTCATCAGTCATGGTTTGATCGCATTAAGGCAGGTCTaGAGGAGATCCGTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: SGPQSQSLLSGFISHGLIALRQV*RRSVLG
Trigger: CCCCAGGACGGATCTCCTGCAGACCTGCCTTAATGC...GATCAAACCATGACTGATGAATCCAGACAGGAGGGATTGACTCTGAGGACCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp ATAGTCAGTCATTCGAATGTATACTCGCATCGGCAGTTAAGCCTCCACAAAGTAGGGCCTGCGCGACTCTaGTCTAGACGGACGGTGACG +
Preference number: 4 (lower is better)
Translates to: IVSHSNVYSHRQLSLHKVGPARL*SRRTVT
Trigger: CGTCACCGTCCGTCTAGAGCAGAGTCGCGCAGGCCC...TACTTTGTGGAGGCTTAACTGCCGATGCGAGTATACATTCGAATGACTGACTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317133.9
CDS-3UTR GCA 90 bp CATCTGAGCCATGACAGTAAGCTCTGCCTTTGGAAAGGAGAGCTCCCACTTCACAGCCACGTAACGGTTTaGTCGGCGGAATTCATCGCT +
Preference number: 4 (lower is better)
Translates to: HLSHDSKLCLWKGELPLHSHVTV*SAEFIA
Trigger: AGCGATGAATTCCGCCGAGCAAACCGTTACGTGGCT...GTGAAGTGGGAGCTCTCCTTTCCAAAGGCAGAGCTTACTGTCATGGCTCAGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317133.9
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp AGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAACATGACAGTAAGCTCTaGCTTTGGAAAGGAGAGCTC +
Preference number: 4 (lower is better)
Translates to: RPRAHMLFCTITRTQPLEHDSKL*LWKGEL
Trigger: GAGCTCTCCTTTCCAAAGGCAGAGCTTACTGTCATG...TTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp TTACGAAGAGCACCCTCGGATGTAGGCTCACGTGAACACACCACCTCCCTCCAACATGACAGTAAGCTCTaGCTTTGGAAAGGAGAGCTC +
Preference number: 4 (lower is better)
Translates to: LRRAPSDVGSREHTTSLQHDSKL*LWKGEL
Trigger: GAGCTCTCCTTTCCAAAGGCAGAGCTTACTGTCATG...TTGGAGGGAGGTGGTGTGTTCACGTGAGCCTACATCCGAGGGTGCTCTTCGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp TTACGAAGAGCACCCTCGGATGTAGGCTCACGTGAACACACCACCTCCCTCCAACTTGCAGAGGCTGAATaGTTCAGCTTTCGGGCTTTA +
Preference number: 4 (lower is better)
Translates to: LRRAPSDVGSREHTTSLQLAEAE*FSFRAL
Trigger: TAAAGCCCGAAAGCTGAAGCATTCAGCCTCTGCAAG...TTGGAGGGAGGTGGTGTGTTCACGTGAGCCTACATCCGAGGGTGCTCTTCGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp GCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGCACAAACAAACACTTCATTaGCATATGCAACCACAAACA +
Preference number: 4 (lower is better)
Translates to: AVRWRQALNTRDARPSVHKQTLH*HMQPQT
Trigger: TGTTTGTGGTTGCATATGGCAATGAAGTGTTTGTTT...GTGCACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp GCGGCAGTGCCGTATGGGCCTTCCTTGAGGTCAAGACTGAGTCTGTCAGCCAGCTCCTCATTGGTCTGCTaGAAGTTAAACTTTGCTCTT +
Preference number: 4 (lower is better)
Translates to: AAVPYGPSLRSRLSLSASSSLVC*KLNFAL
Trigger: AAGAGCAAAGTTTAACTTCCAGCAGACCAATGAGGA...GCTGGCTGACAGACTCAGTCTTGACCTCAAGGAAGGCCCATACGGCACTGCCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp ACCTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCTCGTATCAAATCCTTTaGGAGGGCTCTTCAGTGTTC +
Preference number: 4 (lower is better)
Translates to: TCQGPEPTCCSARLPEHSSYQIL*EGSSVF
Trigger: GAACACTGAAGAGCCCTCCCAAAGGATTTGATACGA...GCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp TCAGGTCCTCAGAGTCAATCCCTCCTGTCTGGATTCATCAGTCATGGTTTGATCGTTTGCTCAGGCCCGTaGTCAGCACGAGAATCCCAG +
Preference number: 4 (lower is better)
Translates to: SGPQSQSLLSGFISHGLIVCSGP*SARESQ
Trigger: CTGGGATTCTCGTGCTGACCACGGGCCTGAGCAAAC...GATCAAACCATGACTGATGAATCCAGACAGGAGGGATTGACTCTGAGGACCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp TCCCAGAGAAGTGAAGAAATGATTGGCATTAAGGAGTCCACACAACCAGGGCAGGTTTGCTCAGGCCCGTaGTCAGCACGAGAATCCCAG +
Preference number: 4 (lower is better)
Translates to: SQRSEEMIGIKESTQPGQVCSGP*SARESQ
Trigger: CTGGGATTCTCGTGCTGACCACGGGCCTGAGCAAAC...CTGCCCTGGTTGTGTGGACTCCTTAATGCCAATCATTTCTTCACTTCTCTGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp ACGCCCAGCGCATGTGGACAAGCACAGACGCCACTGAGTGTGAAGGAACGAGCTTGTCATTCCTGTCGTTaGAAGCTTTCCCTGATAGAT +
Preference number: 4 (lower is better)
Translates to: TPSACGQAQTPLSVKERACHSCR*KLSLID
Trigger: ATCTATCAGGGAAAGCTTCCAACGACAGGAATGACA...AGCTCGTTCCTTCACACTCAGTGGCGTCTGTGCTTGTCCACATGCGCTGGGCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp TTACGAAGAGCACCCTCGGATGTAGGCTCACGTGAACACACCACCTCCCTCCAATCCTGCAGATCCTGCTaGTTGTTGCACGACACTAAT +
Preference number: 4 (lower is better)
Translates to: LRRAPSDVGSREHTTSLQSCRSC*LLHDTN
Trigger: ATTAGTGTCGTGCAACAACCAGCAGGATCTGCAGGA...TTGGAGGGAGGTGGTGTGTTCACGTGAGCCTACATCCGAGGGTGCTCTTCGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp CCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAACTGGGCTCACTCCTGCAGATCCTGCTaGTTGTTGCACGACACTAAT +
Preference number: 4 (lower is better)
Translates to: PTCCSARLPEHSRWNWAHSCRSC*LLHDTN
Trigger: ATTAGTGTCGTGCAACAACCAGCAGGATCTGCAGGA...GTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp TCAGGTCCTCAGAGTCAATCCCTCCTGTCTGGATTCATCAGTCATGGTTTGATCTCAGGCTCCAGGGCTTaGGTGTTTTCGGAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: SGPQSQSLLSGFISHGLISGSRA*VFSEAP
Trigger: TGGAGCCTCCGAAAACACCCAAGCCCTGGAGCCTGA...GATCAAACCATGACTGATGAATCCAGACAGGAGGGATTGACTCTGAGGACCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp CTTTCGGTGAGCACTGAAGCCTGCTGGCTACGGCCAATGGTGGAGGAGACCTCGAAAGCAAAGTCCCTGTaGTCACCCTTATTTATTGCT +
Preference number: 4 (lower is better)
Translates to: LSVSTEACWLRPMVEETSKAKSL*SPLFIA
Trigger: AGCAATAAATAAGGGTGACCACAGGGACTTTGCTTT...CGAGGTCTCCTCCACCATTGGCCGTAGCCAGCAGGCTTCAGTGCTCACCGAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp GCGGCAGTGCCGTATGGGCCTTCCTTGAGGTCAAGACTGAGTCTGTCAGCCAGCAAAGCAAAGTCCCTGTaGTCACCCTTATTTATTGCT +
Preference number: 4 (lower is better)
Translates to: AAVPYGPSLRSRLSLSASKAKSL*SPLFIA
Trigger: AGCAATAAATAAGGGTGACCACAGGGACTTTGCTTT...GCTGGCTGACAGACTCAGTCTTGACCTCAAGGAAGGCCCATACGGCACTGCCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp CATCTGAGCCATGACAGTAAGCTCTGCCTTTGGAAAGGAGAGCTCCCACTTCACCACAGAGCCGTGAGGTaGAGACAAGCTCTGAACACA +
Preference number: 4 (lower is better)
Translates to: HLSHDSKLCLWKGELPLHHRAVR*RQALNT
Trigger: TGTGTTCAGAGCTTGTCTCCACCTCACGGCTCTGTG...GTGAAGTGGGAGCTCTCCTTTCCAAAGGCAGAGCTTACTGTCATGGCTCAGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp CCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAACTGGGCTCACTGGGGTTGCTGTAAATaGAGTTTCACTGCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: PTCCSARLPEHSRWNWAHWGCCK*SFTAAG
Trigger: ACCAGCTGCAGTGAAACTCCATTTACAGCAACCCCA...GTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp CGATTACCAGAACACAGCCGTTGGAACTGGGCTCACAGCACCTTTGCTGCATATGGTTTGGCGAAGGAGTaGGCAGTGGGGAAGAAAGAA +
Preference number: 4 (lower is better)
Translates to: RLPEHSRWNWAHSTFAAYGLAKE*AVGKKE
Trigger: TTCTTTCTTCCCCACTGCCCACTCCTTCGCCAAACC...ATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp CCATTAGCTTGTTCCATGCTGAATGAAGCCACCCAACTTTCTAAACAACGTGCTGCTCCCTGGCAGCTCTaGGCTTGTGAGCAGCAGGAC +
Preference number: 4 (lower is better)
Translates to: PLACSMLNEATQLSKQRAAPWQL*ACEQQD
Trigger: GTCCTGCTGCTCACAAGCCCAGAGCTGCCAGGGAGC...AGCACGTTGTTTAGAAAGTTGGGTGGCTTCATTCAGCATGGAACAAGCTAATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp CCATTAGCTTGTTCCATGCTGAATGAAGCCACCCAACTTTCTAAACAACGTGCTCTGCCAGGAGCTCCCTaGCAGCTCTGGGCTTGTGAG +
Preference number: 4 (lower is better)
Translates to: PLACSMLNEATQLSKQRALPGAP*QLWACE
Trigger: CTCACAAGCCCAGAGCTGCCAGGGAGCTCCTGGCAG...AGCACGTTGTTTAGAAAGTTGGGTGGCTTCATTCAGCATGGAACAAGCTAATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp ACAGGCTTCGTCTCCTCTGCACTGGAACACAGTGGGGGAAACGTTCCCTGCTTAAGTGTGCAAAGACTGTaGTCCAAGGGAGTCAAAAGA +
Preference number: 4 (lower is better)
Translates to: TGFVSSALEHSGGNVPCLSVQRL*SKGVKR
Trigger: TCTTTTGACTCCCTTGGATCACAGTCTTTGCACACT...TAAGCAGGGAACGTTTCCCCCACTGTGTTCCAGTGCAGAGGAGACGAAGCCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp ATCGCCCTCCCAGTTCCGGATGGCTTCCGTCAGGATCTGCAGCTCAAGCTCTTTGCTCTTACTACCAGTTaGTTGTTGCTATTATCGGTC +
Preference number: 4 (lower is better)
Translates to: IALPVPDGFRQDLQLKLFALTTS*LLLLSV
Trigger: GACCGATAATAGCAACAATCAACTGGTAGTAAGAGC...AAAGAGCTTGAGCTGCAGATCCTGACGGAAGCCATCCGGAACTGGGAGGGCGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR TCA 90 bp GACCTGGGACATGTAAGTGACGTTGCCCAGAGTTTTAATGTCATCGCCCTCCCAGATGACGTCTCCTTTTaGGAAGGAAAGCTCGTCCTC +
Preference number: 4 (lower is better)
Translates to: DLGHVSDVAQSFNVIALPDDVSF*EGKLVL
Trigger: GAGGACGAGCTTTCCTTCTCAAAAGGAGACGTCATC...TGGGAGGGCGATGACATTAAAACTCTGGGCAACGTCACTTACATGTCCCAGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR TCA 90 bp AAACAATGGCCCTCTGGATGCCACATCGCCACTGCCACAGGAGAACTGTCTTTTTTCACTGCAGAAGGGTaGTTGGCACAATACGTGAGG +
Preference number: 4 (lower is better)
Translates to: KQWPSGCHIATATGELSFFTAEG*LAQYVR
Trigger: CCTCACGTATTGTGCCAATCACCCTTCTGCAGTGAA...AAAAGACAGTTCTCCTGTGGCAGTGGCGATGTGGCATCCAGAGGGCCATTGTTT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp GGACATGTAAGTGACGTTGCCCAGAGTTTTAATGTCATCGCCCTCCCAGTTCCGTTCACTGCAGAAGGGTaGTTGGCACAATACGTGAGG +
Preference number: 4 (lower is better)
Translates to: GHVSDVAQSFNVIALPVPFTAEG*LAQYVR
Trigger: CCTCACGTATTGTGCCAATCACCCTTCTGCAGTGAA...CGGAACTGGGAGGGCGATGACATTAAAACTCTGGGCAACGTCACTTACATGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR TCA 90 bp TCAGGTCCTCAGAGTCAATCCCTCCTGTCTGGATTCATCAGTCATGGTTTGATCCACCTTTGGTCTCCATaGACTCCCCCAACTCCTCAC +
Preference number: 4 (lower is better)
Translates to: SGPQSQSLLSGFISHGLIHLWSP*TPPTPH
Trigger: GTGAGGAGTTGGGGGAGTTCATGGAGACCAAAGGTG...GATCAAACCATGACTGATGAATCCAGACAGGAGGGATTGACTCTGAGGACCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp CTTCTTATTCACGTAGCTGGAAAGGACATTCTAGCATGGGGATTAGCCCGGACACACCTTTGGTCTCCATaGACTCCCCCAACTCCTCAC +
Preference number: 4 (lower is better)
Translates to: LLIHVAGKDILAWGLARTHLWSP*TPPTPH
Trigger: GTGAGGAGTTGGGGGAGTTCATGGAGACCAAAGGTG...TGTCCGGGCTAATCCCCATGCTAGAATGTCCTTTCCAGCTACGTGAATAAGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp AGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAAGGGCTGAAAGGTTTTTaGAGGCAGCCATGGATTTTT +
Preference number: 4 (lower is better)
Translates to: RPRAHMLFCTITRTQPLEGLKGF*RQPWIF
Trigger: AAAAATCCATGGCTGCCTTCAAAAACCTTTCAGCCC...TTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp TTTAATGTCATCGCCCTCCCAGTTCCGGATGGCTTCCGTCAGGATCTGCAGCTCGGGCTGAAAGGTTTTTaGAGGCAGCCATGGATTTTT +
Preference number: 4 (lower is better)
Translates to: FNVIALPVPDGFRQDLQLGLKGF*RQPWIF
Trigger: AAAAATCCATGGCTGCCTTCAAAAACCTTTCAGCCC...GAGCTGCAGATCCTGACGGAAGCCATCCGGAACTGGGAGGGCGATGACATTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR TCA 90 bp CCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAACTGGGCTCACTTCTTGACATTGGGCTaGAAGGTTTTTGAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: PTCCSARLPEHSRWNWAHFLTLG*KVFEGS
Trigger: GCTGCCTTCAAAAACCTTTCAGCCCAATGTCAAGAA...GTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp TCCACCAGGCTTCTGCTTCCGGTGGATGCGGGCATGGGACTTCTTATTCACGTATTCTTGACATTGGGCTaGAAGGTTTTTGAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: STRLLLPVDAGMGLLIHVFLTLG*KVFEGS
Trigger: GCTGCCTTCAAAAACCTTTCAGCCCAATGTCAAGAA...TACGTGAATAAGAAGTCCCATGCCCGCATCCACCGGAAGCAGAAGCCTGGTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp TTTAATGTCATCGCCCTCCCAGTTCCGGATGGCTTCCGTCAGGATCTGCAGCTCTTCTTGACATTGGGCTaGAAGGTTTTTGAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: FNVIALPVPDGFRQDLQLFLTLG*KVFEGS
Trigger: GCTGCCTTCAAAAACCTTTCAGCCCAATGTCAAGAA...GAGCTGCAGATCCTGACGGAAGCCATCCGGAACTGGGAGGGCGATGACATTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR TCA 90 bp CCTCTACTACAGTCCAGTAGTCTACACTTGCAGAGGCTGAATGCTTCAGCTTTCTCACTTCCGGCACACTaGATCAGGACCTGGGACATG +
Preference number: 4 (lower is better)
Translates to: PLLQSSSLHLQRLNASAFSLPAH*IRTWDM
Trigger: CATGTCCCAGGTCCTGATTCAGTGTGCCGGAAGTGA...GAAAGCTGAAGCATTCAGCCTCTGCAAGTGTAGACTACTGGACTGTAGTAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp GGCACACTGAATCAGGACCTGGGACATGTAAGTGACGTTGCCCAGAGTTTTAATTCACTTCCGGCACACTaGATCAGGACCTGGGACATG +
Preference number: 4 (lower is better)
Translates to: GTLNQDLGHVSDVAQSFNSLPAH*IRTWDM
Trigger: CATGTCCCAGGTCCTGATTCAGTGTGCCGGAAGTGA...ATTAAAACTCTGGGCAACGTCACTTACATGTCCCAGGTCCTGATTCAGTGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR TCA 90 bp GTGGGGAAGAAAGAAATCACGGCCACCTGGAATTACAGCCACCCTGAAGAAGGAGGTTTCCCACAGACGTaGCCTTCGTTTGCTTCTGTA +
Preference number: 4 (lower is better)
Translates to: VGKKEITATWNYSHPEEGGFPQT*PSFASV
Trigger: TACAGAAGCAAACGAAGGTCACGTCTGTGGGAAACC...TCCTTCTTCAGGGTGGCTGTAATTCCAGGTGGCCGTGATTTCTTTCTTCCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp CGATTACCAGAACACAGCCGTTGGAACTGGGCTCACAGCACCTTTGCTGCATATGGTATGAGATGGCACTaGATGAGGCTTTATGGTGGG +
Preference number: 4 (lower is better)
Translates to: RLPEHSRWNWAHSTFAAYGMRWH*MRLYGG
Trigger: CCCACCATAAAGCCTCATTCAGTGCCATCTCATACC...ATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp GTGGGGAAGAAAGAAATCACGGCCACCTGGAATTACAGCCACCCTGAAGAAGGAGGTATGAGATGGCACTaGATGAGGCTTTATGGTGGG +
Preference number: 4 (lower is better)
Translates to: VGKKEITATWNYSHPEEGGMRWH*MRLYGG
Trigger: CCCACCATAAAGCCTCATTCAGTGCCATCTCATACC...TCCTTCTTCAGGGTGGCTGTAATTCCAGGTGGCCGTGATTTCTTTCTTCCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp AGCACCTCTGAACTGTGCGTGAGGAGGCACAATTCAGGGTTGTTTCTCGAGAACGGTATGAGATGGCACTaGATGAGGCTTTATGGTGGG +
Preference number: 4 (lower is better)
Translates to: STSELCVRRHNSGLFLENGMRWH*MRLYGG
Trigger: CCCACCATAAAGCCTCATTCAGTGCCATCTCATACC...GTTCTCGAGAAACAACCCTGAATTGTGCCTCCTCACGCACAGTTCAGAGGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544132.2
CDS-3UTR TCA 90 bp ACGCCCAGCGCATGTGGACAAGCACAGACGCCACTGAGTGTGAAGGAACGAGCTTGCAGTAAGCTTCAATaGCTTTCAGAATCTGAGCAT +
Preference number: 4 (lower is better)
Translates to: TPSACGQAQTPLSVKERACSKLQ*LSESEH
Trigger: ATGCTCAGATTCTGAAAGTCATTGAAGCTTACTGCA...AGCTCGTTCCTTCACACTCAGTGGCGTCTGTGCTTGTCCACATGCGCTGGGCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp AGGGGAAGGGCTGTTAAAAACACAAGTATTCTTGTGAAATACTTCGATCTGAGCCCTGCCCTGTGGTCCTaGGTGCACCCCGACTTGGGT +
Preference number: 4 (lower is better)
Translates to: RGRAVKNTSILVKYFDLSPALWS*VHPDLG
Trigger: ACCCAAGTCGGGGTGCACTCAGGACCACAGGGCAGG...GCTCAGATCGAAGTATTTCACAAGAATACTTGTGTTTTTAACAGCCCTTCCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp CTTTCGGTGAGCACTGAAGCCTGCTGGCTACGGCCAATGGTGGAGGAGACCTCGGTATTTTGTTGTTACTaGACTAGCCTATACAGAACC +
Preference number: 4 (lower is better)
Translates to: LSVSTEACWLRPMVEETSVFCCY*TSLYRT
Trigger: GGTTCTGTATAGGCTAGTTCAGTAACAACAAAATAC...CGAGGTCTCCTCCACCATTGGCCGTAGCCAGCAGGCTTCAGTGCTCACCGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp CTGGGGACTCGGACAGCAACGCTACCGGCTCCGAGAGGACAGTTAATGTCGCCTTTGCTTTATTCTTGCTaGAGGAGGGGATTTTACTTT +
Preference number: 4 (lower is better)
Translates to: LGTRTATLPAPRGQLMSPLLYSC*RRGFYF
Trigger: AAAGTAAAATCCCCTCCTTCAGCAAGAATAAAGCAA...AGGCGACATTAACTGTCCTCTCGGAGCCGGTAGCGTTGCTGTCCGAGTCCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp AAAACAGTGTATTTTGTTGTTACTGAACTAGCCTATACAGAACCGTCTGTGTCCCCCAGCGAGCCGCGGTaGGGACAGGCTTCGTCTCCT +
Preference number: 4 (lower is better)
Translates to: KTVYFVVTELAYTEPSVSPSEPR*GQASSP
Trigger: AGGAGACGAAGCCTGTCCTCACCGCGGCTCGCTGGG...GGACACAGACGGTTCTGTATAGGCTAGTTCAGTAACAACAAAATACACTGTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp AGAACACAGCCGTTGGAACTGGGCTCACAGCACCTTTGCTGCATATATTCTTCTGAAGCCATATGGGTCTaGATCGGGAGGAACCGACTC +
Preference number: 4 (lower is better)
Translates to: RTQPLELGSQHLCCIYSSEAIWV*IGRNRL
Trigger: GAGTCGGTTCCTCCCGATTCAGACCCATATGGCTTC...AGAAGAATATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317133.9
CDS-3UTR TCA 90 bp TTACGAAGAGCACCCTCGGATGTAGGCTCACGTGAACACACCACCTCCCTCCAACTGGTGAGAGATATATaGGCAACAGCTCTTACGAGA +
Preference number: 4 (lower is better)
Translates to: LRRAPSDVGSREHTTSLQLVRDI*ATALTR
Trigger: TCTCGTAAGAGCTGTTGCTCATATATCTCTCACCAG...TTGGAGGGAGGTGGTGTGTTCACGTGAGCCTACATCCGAGGGTGCTCTTCGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp TTACGAAGAGCACCCTCGGATGTAGGCTCACGTGAACACACCACCTCCCTCCAAATTAACACTGGGCTCTaGCTGCTCCTCAATGTTCTT +
Preference number: 4 (lower is better)
Translates to: LRRAPSDVGSREHTTSLQINTGL*LLLNVL
Trigger: AAGAACATTGAGGAGCAGTCAGAGCCCAGTGTTAAT...TTGGAGGGAGGTGGTGTGTTCACGTGAGCCTACATCCGAGGGTGCTCTTCGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp TTACGAAGAGCACCCTCGGATGTAGGCTCACGTGAACACACCACCTCCCTCCAATTTGAAGTCCGAGTGTaGAAAGACTGTGATCCAAGG +
Preference number: 4 (lower is better)
Translates to: LRRAPSDVGSREHTTSLQFEVRV*KDCDPR
Trigger: CCTTGGATCACAGTCTTTGCACACTCGGACTTCAAA...TTGGAGGGAGGTGGTGTGTTCACGTGAGCCTACATCCGAGGGTGCTCTTCGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp CTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGCTACCAGTTGATTGTTaGTATTATCGGTCATGTCCA +
Preference number: 4 (lower is better)
Translates to: LPRPRAHMLFCTITRTQPLPVDC*YYRSCP
Trigger: TGGACATGACCGATAATAGCAACAATCAACTGGTAG...CGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp GGATTTGATGCTACAACTGAATGCAACAGGTCACATTCAGTGCTTTTTGAAGCACCTCGCGCACGTAGTTaGTGGGGAACCAGCCGGTCC +
Preference number: 4 (lower is better)
Translates to: GFDATTECNRSHSVLFEAPRARS*WGTSRS
Trigger: GGACCGGCTGGTTCCCCAGCAACTACGTGCGCGAGG...TGCTTCAAAAAGCACTGAATGTGACCTGTTGCATTCAGTTGTAGCATCAAATCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp CATCTGAGCCATGACAGTAAGCTCTGCCTTTGGAAAGGAGAGCTCCCACTTCACCGTGAGGACATTCACTaGAGAAGGGTGATTGGCACA +
Preference number: 4 (lower is better)
Translates to: HLSHDSKLCLWKGELPLHREDIH*RRVIGT
Trigger: TGTGCCAATCACCCTTCTGCAGTGAATGTCCTCACG...GTGAAGTGGGAGCTCTCCTTTCCAAAGGCAGAGCTTACTGTCATGGCTCAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp CCTCTGCACTGGAACACAGTGGGGGAAACGTTCCCTGCTTATGCCTATGTTACTCGTGAGGACATTCACTaGAGAAGGGTGATTGGCACA +
Preference number: 4 (lower is better)
Translates to: PLHWNTVGETFPAYAYVTREDIH*RRVIGT
Trigger: TGTGCCAATCACCCTTCTGCAGTGAATGTCCTCACG...AGTAACATAGGCATAAGCAGGGAACGTTTCCCCCACTGTGTTCCAGTGCAGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp GACCTGGGACATGTAAGTGACGTTGCCCAGAGTTTTAATGTCATCGCCCTCCCAGTTTGCTTCTGTAGGTaGTCCACCCATTCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: DLGHVSDVAQSFNVIALPVCFCR*STHSCR
Trigger: TCTGCAGGAATGGGTGGAGCACCTACAGAAGCAAAC...TGGGAGGGCGATGACATTAAAACTCTGGGCAACGTCACTTACATGTCCCAGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR GCA 90 bp CCATTAGCTTGTTCCATGCTGAATGAAGCCACCCAACTTTCTAAACAACGTGCTGGCTTGCTGTCTGCGTaGTTGCTGGACGGAGTGACC +
Preference number: 4 (lower is better)
Translates to: PLACSMLNEATQLSKQRAGLLSA*LLDGVT
Trigger: GGTCACTCCGTCCAGCAAGCACGCAGACAGCAAGCC...AGCACGTTGTTTAGAAAGTTGGGTGGCTTCATTCAGCATGGAACAAGCTAATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp GTGTATTTTGTTGTTACTGAACTAGCCTATACAGAACCGTCTGTGTCCTCCCAACGCGGGCTTGCTGTCTaGGTGCTTGCTGGACGGAGT +
Preference number: 4 (lower is better)
Translates to: VYFVVTELAYTEPSVSSQRGLAV*VLAGRS
Trigger: ACTCCGTCCAGCAAGCACGCAGACAGCAAGCCCGCG...TTGGGAGGACACAGACGGTTCTGTATAGGCTAGTTCAGTAACAACAAAATACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp CCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAACTGGGCTCACGTTGAATTGAGTGTTTaGCTTGTTTTGGCGCTGGTG +
Preference number: 4 (lower is better)
Translates to: PTCCSARLPEHSRWNWAHVELSV*LVLALV
Trigger: CACCAGCGCCAAAACAAGGCAAACACTCAATTCAAC...GTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp TTTGTTGTTACTGAACTAGCCTATACAGAACCGTCTGTGTCCTCCCAAAACGCAAGCAGAACGAAAACCTaGTCCACGGGCCGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: FVVTELAYTEPSVSSQNASRTKT*STGRAS
Trigger: GGAAGCCCGGCCCGTGGAGCAGGTTTTCGTTCTGCT...TGCGTTTTGGGAGGACACAGACGGTTCTGTATAGGCTAGTTCAGTAACAACAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp CATCTGAGCCATGACAGTAAGCTCTGCCTTTGGAAAGGAGAGCTCCCACTTCACTTCGCTTTGCTACCTTaGAAGCCGGTCATGACGGAA +
Preference number: 4 (lower is better)
Translates to: HLSHDSKLCLWKGELPLHFALLP*KPVMTE
Trigger: TTCCGTCATGACCGGCTTGCAAGGTAGCAAAGCGAA...GTGAAGTGGGAGCTCTCCTTTCCAAAGGCAGAGCTTACTGTCATGGCTCAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317133.9
CDS-3UTR GCA 90 bp CATCTGAGCCATGACAGTAAGCTCTGCCTTTGGAAAGGAGAGCTCCCACTTCACGCCCACATGCTGTTCTaGACGATTACCAGAACACAG +
Preference number: 4 (lower is better)
Translates to: HLSHDSKLCLWKGELPLHAHMLF*TITRTQ
Trigger: CTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGC...GTGAAGTGGGAGCTCTCCTTTCCAAAGGCAGAGCTTACTGTCATGGCTCAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp GTGGGGAAGAAAGAAATCACGGCCACCTGGAATTACAGCCACCCTGAAGAAGGAGCCCACATGCTGTTCTaGACGATTACCAGAACACAG +
Preference number: 4 (lower is better)
Translates to: VGKKEITATWNYSHPEEGAHMLF*TITRTQ
Trigger: CTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGC...TCCTTCTTCAGGGTGGCTGTAATTCCAGGTGGCCGTGATTTCTTTCTTCCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp CCTCTACTACAGTCCAGTAGTCTACACTTGCAGAGGCTGAATGCTTCAGCTTTCGGCCCAGAGCCCACATaGTGTTCTGCACGATTACCA +
Preference number: 4 (lower is better)
Translates to: PLLQSSSLHLQRLNASAFGPEPT*CSARLP
Trigger: TGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCC...GAAAGCTGAAGCATTCAGCCTCTGCAAGTGTAGACTACTGGACTGTAGTAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp ACCTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCGATGCTACAACTGAATaGAACAGGTCACATTCAGTG +
Preference number: 4 (lower is better)
Translates to: TCQGPEPTCCSARLPEHSDATTE*NRSHSV
Trigger: CACTGAATGTGACCTGTTGCATTCAGTTGTAGCATC...GCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp ACCTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCACACCAAATAGAGCGTaGATGGGACAGAACACAATT +
Preference number: 4 (lower is better)
Translates to: TCQGPEPTCCSARLPEHSTPNRA*MGQNTI
Trigger: AATTGTGTTCTGTCCCATGCACGCTCTATTTGGTGT...GCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp GTGGGGAAGAAAGAAATCACGGCCACCTGGAATTACAGCCACCCTGAAGAAGGAATGCCACATCGCCACTaGCACAGGAGAACTGTCTTT +
Preference number: 4 (lower is better)
Translates to: VGKKEITATWNYSHPEEGMPHRH*HRRTVF
Trigger: AAAGACAGTTCTCCTGTGGCAGTGGCGATGTGGCAT...TCCTTCTTCAGGGTGGCTGTAATTCCAGGTGGCCGTGATTTCTTTCTTCCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp TCCACCAGGCTTCTGCTTCCGGTGGATGCGGGCATGGGACTTCTTATTCACGTACTTGAATTGAGTGTTTaGCTTGTTTTGGCGCTGGTG +
Preference number: 4 (lower is better)
Translates to: STRLLLPVDAGMGLLIHVLELSV*LVLALV
Trigger: CACCAGCGCCAAAACAAGGCAAACACTCAATTCAAG...TACGTGAATAAGAAGTCCCATGCCCGCATCCACCGGAAGCAGAAGCCTGGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp TGCAGAAGGGTGATTGGCACAATACGTGAGGTACAGGGTTTTCATCTGTGGCATTGCAGTCTCTGGGTGTaGCTCCACCTTCATGAGCAC +
Preference number: 4 (lower is better)
Translates to: CRRVIGTIREVQGFHLWHCSLWV*LHLHEH
Trigger: GTGCTCATGAAGGTGGAGGCACACCCAGAGACTGCA...ATGCCACAGATGAAAACCCTGTACCTCACGTATTGTGCCAATCACCCTTCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR CCA 90 bp CCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAACTGGGCTCACTCCAAACTCCGATACTaGCCCTGGAACAGTTTTGAA +
Preference number: 4 (lower is better)
Translates to: PTCCSARLPEHSRWNWAHSKLRY*PWNSFE
Trigger: TTCAAAACTGTTCCAGGGCCAGTATCGGAGTTTGGA...GTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp CATCTGAGCCATGACAGTAAGCTCTGCCTTTGGAAAGGAGAGCTCCCACTTCACTCCACACGGGTGACATaGATGACGTCTCCTTTTGAG +
Preference number: 4 (lower is better)
Translates to: HLSHDSKLCLWKGELPLHSTRVT*MTSPFE
Trigger: CTCAAAAGGAGACGTCATCCATGTCACCCGTGTGGA...GTGAAGTGGGAGCTCTCCTTTCCAAAGGCAGAGCTTACTGTCATGGCTCAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp ACATCTAAGAAAAGCAGGCTGCGATACAACAAGCATTTGTTAAGAAAAGCTCAGCGCGCACGTAGTTGCTaGGGAACCAGCCGGTCCGGC +
Preference number: 4 (lower is better)
Translates to: TSKKSRLRYNKHLLRKAQRARSC*GTSRSG
Trigger: GCCGGACCGGCTGGTTCCCCAGCAACTACGTGCGCG...CTGAGCTTTTCTTAACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp TTGATGCTACAACTGAATGCAACAGGTCACATTCAGTGCTTTTTGAAGCAGAAACGCGCACGTAGTTGCTaGGGAACCAGCCGGTCCGGC +
Preference number: 4 (lower is better)
Translates to: LMLQLNATGHIQCFLKQKRARSC*GTSRSG
Trigger: GCCGGACCGGCTGGTTCCCCAGCAACTACGTGCGCG...TTTCTGCTTCAAAAAGCACTGAATGTGACCTGTTGCATTCAGTTGTAGCATCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp GTGGGGAAGAAAGAAATCACGGCCACCTGGAATTACAGCCACCCTGAAGAAGGATCAGTGTTCCTGATTTaGGAGACACAGGCTTCTCGC +
Preference number: 4 (lower is better)
Translates to: VGKKEITATWNYSHPEEGSVFLI*ETQASR
Trigger: GCGAGAAGCCTGTGTCTCCCAAATCAGGAACACTGA...TCCTTCTTCAGGGTGGCTGTAATTCCAGGTGGCCGTGATTTCTTTCTTCCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp CGATTACCAGAACACAGCCGTTGGAACTGGGCTCACAGCACCTTTGCTGCATATTCAGTGTTCCTGATTTaGGAGACACAGGCTTCTCGC +
Preference number: 4 (lower is better)
Translates to: RLPEHSRWNWAHSTFAAYSVFLI*ETQASR
Trigger: GCGAGAAGCCTGTGTCTCCCAAATCAGGAACACTGA...ATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp AGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAATCGTATCAAATCCTTTaGGAGGGCTCTTCAGTGTTC +
Preference number: 4 (lower is better)
Translates to: RPRAHMLFCTITRTQPLESYQIL*EGSSVF
Trigger: GAACACTGAAGAGCCCTCCCAAAGGATTTGATACGA...TTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp AAAGTAGAAACAATGGCCCTCTGGATGCCACATCGCCACTGCCACAGGAGAACTCTGAATGAGGCTTTATaGTGGGGTTTCCCACAGACG +
Preference number: 4 (lower is better)
Translates to: KVETMALWMPHRHCHRRTLNEAL*WGFPQT
Trigger: CGTCTGTGGGAAACCCCACCATAAAGCCTCATTCAG...AGTTCTCCTGTGGCAGTGGCGATGTGGCATCCAGAGGGCCATTGTTTCTACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp AAACAATGGCCCTCTGGATGCCACATCGCCACTGCCACAGGAGAACTGTCTTTTGTTCAGGTTTGCGCTTaGGCAGCAGCTTTTTCATGG +
Preference number: 4 (lower is better)
Translates to: KQWPSGCHIATATGELSFVQVCA*AAAFSW
Trigger: CCATGAAAAAGCTGCTGCCCAAGCGCAAACCTGAAC...AAAAGACAGTTCTCCTGTGGCAGTGGCGATGTGGCATCCAGAGGGCCATTGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp CCTCTGCACTGGAACACAGTGGGGGAAACGTTCCCTGCTTATGCCTATGTTACTGTTCAGGTTTGCGCTTaGGCAGCAGCTTTTTCATGG +
Preference number: 4 (lower is better)
Translates to: PLHWNTVGETFPAYAYVTVQVCA*AAAFSW
Trigger: CCATGAAAAAGCTGCTGCCCAAGCGCAAACCTGAAC...AGTAACATAGGCATAAGCAGGGAACGTTTCCCCCACTGTGTTCCAGTGCAGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp AAACAATGGCCCTCTGGATGCCACATCGCCACTGCCACAGGAGAACTGTCTTTTGAGTCTAGGCTTGGTTaGTCATCATCAGCCAAGACG +
Preference number: 4 (lower is better)
Translates to: KQWPSGCHIATATGELSFESRLG*SSSAKT
Trigger: CGTCTTGGCTGATGATGACCAACCAAGCCTAGACTC...AAAAGACAGTTCTCCTGTGGCAGTGGCGATGTGGCATCCAGAGGGCCATTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp ACAGGCTTCGTCTCCTCTGCACTGGAACACAGTGGGGGAAACGTTCCCTGCTTAACATCCCTTATAGATTaGTCTCATCCCAGGCAGGAT +
Preference number: 4 (lower is better)
Translates to: TGFVSSALEHSGGNVPCLTSLID*SHPRQD
Trigger: ATCCTGCCTGGGATGAGACCAATCTATAAGGGATGT...TAAGCAGGGAACGTTTCCCCCACTGTGTTCCAGTGCAGAGGAGACGAAGCCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp CATCTGAGAATCACAGTACTCAGACAGCGGACAAGAGCAAACACCTCTAGGTGGTGCACTGGAACACAGTaGGGGAAACGTTCCCTGCTT +
Preference number: 4 (lower is better)
Translates to: HLRITVLRQRTRANTSRWCTGTQ*GKRSLL
Trigger: AAGCAGGGAACGTTTCCCCCACTGTGTTCCAGTGCA...CCACCTAGAGGTGTTTGCTCTTGTCCGCTGTCTGAGTACTGTGATTCTCAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp ACAGGCTTCGTCTCCTCTGCACTGGAACACAGTGGGGGAAACGTTCCCTGCTTAAGCCGAGGAAGATACTaGATCCACAGAAAGAAAAGG +
Preference number: 4 (lower is better)
Translates to: TGFVSSALEHSGGNVPCLSRGRY*IHRKKR
Trigger: CCTTTTCTTTCTGTGGATCCAGTATCTTCCTCGGCT...TAAGCAGGGAACGTTTCCCCCACTGTGTTCCAGTGCAGAGGAGACGAAGCCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp AGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAACAATTCAGGGAAGTTTaGGGTGAAGATGCGAGTGAA +
Preference number: 4 (lower is better)
Translates to: RPRAHMLFCTITRTQPLEQFREV*GEDASE
Trigger: TTCACTCGCATCTTCACCCCAAACTTCCCTGAATTG...TTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp ACCTCAGAGTTTCTGAAGGACAACAGCAACAACCCGGAGCAGGGGCACGTGTGCTCCGCGGCTAAGTACTaGCACATTGTAATAGCTTTT +
Preference number: 4 (lower is better)
Translates to: TSEFLKDNSNNPEQGHVCSAAKY*HIVIAF
Trigger: AAAAGCTATTACAATGTGCCAGTACTTAGCCGCGGA...GCACACGTGCCCCTGCTCCGGGTTGTTGCTGTTGTCCTTCAGAAACTCTGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469877.5
3UTR CAA 72 bp TGTAGGTGCTCCACCCATTCCTGCAGATCCTGCTGGTaGTTGCACGACACTAATATCCGCTCAATCATGCTC +
Preference number: 4 (lower is better)
Translates to: CRCSTHSCRSCW*LHDTNIRSIML
Trigger: GAGCATGATTGAGCGGATATTAGTGTCGTGCAACAACCAGCAGGATCTGCAGGAATGGGTGGAGCACCTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR TCA 90 bp TTACGAAGAGCACCCTCGGATGTAGGCTCACGTGAACACACCACCTCCCTCCAAGCTCTTACTACCAGTTaGTTGTTGCTATTATCGGTC +
Preference number: 4 (lower is better)
Translates to: LRRAPSDVGSREHTTSLQALTTS*LLLLSV
Trigger: GACCGATAATAGCAACAATCAACTGGTAGTAAGAGC...TTGGAGGGAGGTGGTGTGTTCACGTGAGCCTACATCCGAGGGTGCTCTTCGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp GGATTTGATGCTACAACTGAATGCAACAGGTCACATTCAGTGCTTTTTGAAGCAGCTTCTCGCTGGCCTTaGCCTCGCGCACGTAGTTGC +
Preference number: 4 (lower is better)
Translates to: GFDATTECNRSHSVLFEAASRWP*PRARSC
Trigger: GCAACTACGTGCGCGAGGTCAAGGCCAGCGAGAAGC...TGCTTCAAAAAGCACTGAATGTGACCTGTTGCATTCAGTTGTAGCATCAAATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp CAGAGTTTTAATGTCATCGCCCTCCCAGTTCCGGATGGCTTCCGTCAGGATCTGGATTGGCACAATACGTaGGGTACAGGGTTTTCATCT +
Preference number: 4 (lower is better)
Translates to: QSFNVIALPVPDGFRQDLDWHNT*GTGFSS
Trigger: AGATGAAAACCCTGTACCTCACGTATTGTGCCAATC...CAGATCCTGACGGAAGCCATCCGGAACTGGGAGGGCGATGACATTAAAACTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR TCA 90 bp CCTCTACTACAGTCCAGTAGTCTACACTTGCAGAGGCTGAATGCTTCAGCTTTCCCTCACTGTGTTCCGTaGGGACATTCACTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: PLLQSSSLHLQRLNASAFPHCVP*GHSLQK
Trigger: CTTCTGCAGTGAATGTCCTCACGGAACACAGTGAGG...GAAAGCTGAAGCATTCAGCCTCTGCAAGTGTAGACTACTGGACTGTAGTAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp GGACATGTAAGTGACGTTGCCCAGAGTTTTAATGTCATCGCCCTCCCAGTTCCGCTCTTCCGGACTTCTTaGCATTGGGCTGAAAGGTTT +
Preference number: 4 (lower is better)
Translates to: GHVSDVAQSFNVIALPVPLFRTS*HWAERF
Trigger: AAACCTTTCAGCCCAATGTCAAGAAGTCCGGAAGAG...CGGAACTGGGAGGGCGATGACATTAAAACTCTGGGCAACGTCACTTACATGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR TCA 90 bp CCTCTACTACAGTCCAGTAGTCTACACTTGCAGAGGCTGAATGCTTCAGCTTTCCGCGAACTCCTCATCTaGAGGCTTCCGTTCAGGTTT +
Preference number: 4 (lower is better)
Translates to: PLLQSSSLHLQRLNASAFRELLI*RLPFRF
Trigger: AAACCTGAACGGAAGCCTTCAGATGAGGAGTTCGCG...GAAAGCTGAAGCATTCAGCCTCTGCAAGTGTAGACTACTGGACTGTAGTAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp CTGTGGTCACCCTTATTTATTGCTGAAGCAGAACGAAAACCTGCTCCACGGGCCTCATCAGCCAAGACGTaGTTATGCATCAGGTCAGTG +
Preference number: 4 (lower is better)
Translates to: LWSPLFIAEAERKPAPRASSAKT*LCIRSV
Trigger: CACTGACCTGATGCATAATCACGTCTTGGCTGATGA...GGCCCGTGGAGCAGGTTTTCGTTCTGCTTCAGCAATAAATAAGGGTGACCACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000218789.9
CDS-3UTR TCA 90 bp CATCTGAGCCATGACAGTAAGCTCTGCCTTTGGAAAGGAGAGCTCCCACTTCACTCATCAGCCAAGACGTaGTTATGCATCAGGTCAGTG +
Preference number: 4 (lower is better)
Translates to: HLSHDSKLCLWKGELPLHSSAKT*LCIRSV
Trigger: CACTGACCTGATGCATAATCACGTCTTGGCTGATGA...GTGAAGTGGGAGCTCTCCTTTCCAAAGGCAGAGCTTACTGTCATGGCTCAGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp AGAACACAGCCGTTGGAACTGGGCTCACAGCACCTTTGCTGCATATATTCTTCTGTCTTCCGAGAGGTCTaGAGGCTCCAAACGAGAAAG +
Preference number: 4 (lower is better)
Translates to: RTQPLELGSQHLCCIYSSVFREV*RLQTRK
Trigger: CTTTCTCGTTTGGAGCCTTCAGACCTCTCGGAAGAC...AGAAGAATATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp GTGTATTTTGTTGTTACTGAACTAGCCTATACAGAACCGTCTGTGTCCTCCCAACCCAGGCAGACAACGTaGCCAGTCACGGAAGGAAGC +
Preference number: 4 (lower is better)
Translates to: VYFVVTELAYTEPSVSSQPRQTT*PVTEGS
Trigger: GCTTCCTTCCGTGACTGGTCACGTTGTCTGCCTGGG...TTGGGAGGACACAGACGGTTCTGTATAGGCTAGTTCAGTAACAACAAAATACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp CCTCTGCACTGGAACACAGTGGGGGAAACGTTCCCTGCTTATGCCTATGTTACTTTGCTTGTGCCCGCATaGGTGAATGATCTGCTAAGT +
Preference number: 4 (lower is better)
Translates to: PLHWNTVGETFPAYAYVTLLVPA*VNDLLS
Trigger: ACTTAGCAGATCATTCACTCATGCGGGCACAAGCAA...AGTAACATAGGCATAAGCAGGGAACGTTTCCCCCACTGTGTTCCAGTGCAGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp CGATTACCAGAACACAGCCGTTGGAACTGGGCTCACAGCACCTTTGCTGCATATTGCAGCAACTGTGTTTaGGTGTTGTGGTCTACACAG +
Preference number: 4 (lower is better)
Translates to: RLPEHSRWNWAHSTFAAYCSNCV*VLWSTQ
Trigger: CTGTGTAGACCACAACACTCAAACACAGTTGCTGCA...ATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp ATCGCCCTCCCAGTTCCGGATGGCTTCCGTCAGGATCTGCAGCTCAAGCTCTTTATCTGTAGTAACAGATaGTCTGGGGAAACACATTCA +
Preference number: 4 (lower is better)
Translates to: IALPVPDGFRQDLQLKLFICSNR*SGETHS
Trigger: TGAATGTGTTTCCCCAGATCATCTGTTACTACAGAT...AAAGAGCTTGAGCTGCAGATCCTGACGGAAGCCATCCGGAACTGGGAGGGCGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR GCA 90 bp CCTGCTACAACAGCAAACTCCAATAAACTCAAGTTGAATGGTTTCCCACTGCAAGGAACTCGCGGATGTTaGTCAGGCACTCGCTCTCGC +
Preference number: 4 (lower is better)
Translates to: PATTANSNKLKLNGFPLQGTRGC*SGTRSR
Trigger: GCGAGAGCGAGTGCCTGAGCAACATCCGCGAGTTCC...TTGCAGTGGGAAACCATTCAACTTGAGTTTATTGGAGTTTGCTGTTGTAGCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218789.9
ENST00000375736.8
CDS-3UTR GCA 90 bp ACAGGCTTCGTCTCCTCTGCACTGGAACACAGTGGGGGAAACGTTCCCTGCTTACTGATACAAATCATTTaGATCAAACGTCTCCAGCCG +
Preference number: 4 (lower is better)
Translates to: TGFVSSALEHSGGNVPCLLIQII*IKRLQP
Trigger: CGGCTGGAGACGTTTGATGCAAATGATTTGTATCAG...TAAGCAGGGAACGTTTCCCCCACTGTGTTCCAGTGCAGAGGAGACGAAGCCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000218789.9
ENST00000375736.8
CDS-3UTR GCA 90 bp AGGGTGATTGGCACAATACGTGAGGTACAGGGTTTTCATCTGTGGCATCAGGTTGCTTCCGTCAGGATCTaGAGCTCAAGCTCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: RVIGTIREVQGFHLWHQVASVRI*SSSSFL
Trigger: GAGGAAAGAGCTTGAGCTGCAGATCCTGACGGAAGC...AACCTGATGCCACAGATGAAAACCCTGTACCTCACGTATTGTGCCAATCACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR GCA 90 bp AAAGGAAACCAAAAGCAAAGTCCCTGTGGTCACCCTTATTTATTGCTGAAGCAGGGCTTGCTGTCTGCGTaGTTGCTGGACGGAGTGACC +
Preference number: 4 (lower is better)
Translates to: KGNQKQSPCGHPYLLLKQGLLSA*LLDGVT
Trigger: GGTCACTCCGTCCAGCAAGCACGCAGACAGCAAGCC...CTGCTTCAGCAATAAATAAGGGTGACCACAGGGACTTTGCTTTTGGTTTCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp AGGGGAAGGGCTGTTAAAAACACAAGTATTCTTGTGAAATACTTCGATCTGAGCCGCGGGCTTGCTGTCTaGGTGCTTGCTGGACGGAGT +
Preference number: 4 (lower is better)
Translates to: RGRAVKNTSILVKYFDLSRGLAV*VLAGRS
Trigger: ACTCCGTCCAGCAAGCACGCAGACAGCAAGCCCGCG...GCTCAGATCGAAGTATTTCACAAGAATACTTGTGTTTTTAACAGCCCTTCCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp ACATCTAAGAAAAGCAGGCTGCGATACAACAAGCATTTGTTAAGAAAAGCTCAGTCAGCGGCGCGGGCTTaGTGTCTGCGTGCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: TSKKSRLRYNKHLLRKAQSAARA*CLRACW
Trigger: CCAGCAAGCACGCAGACAGCAAGCCCGCGCCGCTGA...CTGAGCTTTTCTTAACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
ENST00000478679.5
CDS-3UTR GCA 90 bp GCTTGTTCCATGCTGAATGAAGCCACCCAACTTTCTAAACAACGTGCTACTGCCGCTTCCGTTCAGGTTTaGGCTTGGGCAGCAGCTTTT +
Preference number: 4 (lower is better)
Translates to: ACSMLNEATQLSKQRATAASVQV*AWAAAF
Trigger: AAAAGCTGCTGCCCAAGCGCAAACCTGAACGGAAGC...GGCAGTAGCACGTTGTTTAGAAAGTTGGGTGGCTTCATTCAGCATGGAACAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp CCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAACTGGGCTCACATCAGGTCAGTGCCTTaGCATGTTGAATTGAGTGTT +