RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ARHGEF7 (Homo sapiens)

Ensembl gene IDs: ENSG00000102606

Ensembl transcript IDs: ENST00000218789.9, ENST00000317133.9, ENST00000375723.5, ENST00000375736.8, ENST00000375739.6, ENST00000375741.6, ENST00000422836.2, ENST00000426073.6, ENST00000426768.2, ENST00000449979.5, ENST00000466143.5, ENST00000467053.5, ENST00000469877.5, ENST00000478679.5, ENST00000483189.1, ENST00000483540.1, ENST00000491688.1, ENST00000491775.5, ENST00000544132.2, ENST00000646102.1, ENST00000646102.2

Found 1644 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGGCAGCGTGTGGTAGGCGGGCGTCAGCGGCGCGGGCTTGCTGTCTaGGTGCTTGCTGGACGGAGTGACCGGGTGGGAGGGGAGGGTATG +
Preference number: 1 (lower is better)
Translates to: GQRVVGGRQRRGLAV*VLAGRSDRVGGEGM
Trigger: CATACCCTCCCCTCCCACCCGGTCACTCCGTCCAGCAAGCACGCAGACAGCAAGCCCGCGCCGCTGACGCCCGCCTACCACACGCTGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469877.5
3UTR CCA 90 bp GCCGGGCTTCCTGCCCAGGACCGCACAGGCTTTCCAGAGCCAGCCTaGGCCCAGCGAGCCGCGGTGAGGACAGGCTTCGTCTCCTCTGCA +
Preference number: 1 (lower is better)
Translates to: AGLPAQDRTGFPEPA*AQRAAVRTGFVSSA
Trigger: TGCAGAGGAGACGAAGCCTGTCCTCACCGCGGCTCGCTGGGCCCAGGCTGGCTCTGGAAAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR TCA 90 bp ACCGCACAGGCTTTCCAGAGCCAGCCTGGGCCCAGCGAGCCGCGGTaGGGACAGGCTTCGTCTCCTCTGCACTGGAACACAGTGGGGGAA +
Preference number: 1 (lower is better)
Translates to: TAQAFQSQPGPSEPR*GQASSPLHWNTVGE
Trigger: TTCCCCCACTGTGTTCCAGTGCAGAGGAGACGAAGCCTGTCCTCACCGCGGCTCGCTGGGCCCAGGCTGGCTCTGGAAAGCCTGTGCGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR GCA 90 bp AGCCTGGGCCCAGCGAGCCGCGGTGAGGACAGGCTTCGTCTCCTCTaGACTGGAACACAGTGGGGGAAACGTTCCCTGCTTATGCCTATG +
Preference number: 1 (lower is better)
Translates to: SLGPASRGEDRLRLL*TGTQWGKRSLLMPM
Trigger: CATAGGCATAAGCAGGGAACGTTTCCCCCACTGTGTTCCAGTGCAGAGGAGACGAAGCCTGTCCTCACCGCGGCTCGCTGGGCCCAGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR CCA 90 bp TTCACGGCCACAACGCAGCACACAGAAGAGCACAGAGCCGTGAGGTaGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGCAC +
Preference number: 1 (lower is better)
Translates to: FTATTQHTEEHRAVR*RQALNTRDARPSVH
Trigger: GTGCACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGCTCTGTGCTCTTCTGTGTGCTGCGTTGTGGCCGTGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR TCA 90 bp ACTGAAGCCTGCTGGCTACGGCCAATGGTGGAGGAGACCTCGGGATaGGGCTGGCCTGATGACAAAACTCCACCCATCAGTATCAGCCTG +
Preference number: 1 (lower is better)
Translates to: TEACWLRPMVEETSG*GWPDDKTPPISISL
Trigger: CAGGCTGATACTGATGGGTGGAGTTTTGTCATCAGGCCAGCCTCATCCCGAGGTCTCCTCCACCATTGGCCGTAGCCAGCAGGCTTCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR GCA 90 bp CCAGGCAGACAACGTGACCAGTCACGGAAGGAAGCCAAAGGGGCTTaGTGGGCACCAGAGACTGTAATTAGCAAGGGCAAGGAAGAACCG +
Preference number: 1 (lower is better)
Translates to: PGRQRDQSRKEAKGA*WAPETVISKGKEEP
Trigger: CGGTTCTTCCTTGCCCTTGCTAATTACAGTCTCTGGTGCCCAGCAAGCCCCTTTGGCTTCCTTCCGTGACTGGTCACGTTGTCTGCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR TCA 90 bp TCTAGGGCCACACGGAGCAGAAGCAGCTTCCCACCCAAGCACCTCTaGACTGTGCGTGAGGAGGCACAATTCAGGGTTGTTTCTCGAGAA +
Preference number: 1 (lower is better)
Translates to: SRATRSRSSFPPKHL*TVREEAQFRVVSRE
Trigger: TTCTCGAGAAACAACCCTGAATTGTGCCTCCTCACGCACAGTTCAGAGGTGCTTGGGTGGGAAGCTGCTTCTGCTCCGTGTGGCCCTAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544132.2
3UTR GCA 90 bp CTGCGGAACGAACCAGGCATCCACCAGGCTTCTGCTTCCGGTGGATaGGGGCATGGGACTTCTTATTCACGTAGCTGGAAAGGACATTCT +
Preference number: 1 (lower is better)
Translates to: LRNEPGIHQASASGG*GHGTSYSRSWKGHS
Trigger: AGAATGTCCTTTCCAGCTACGTGAATAAGAAGTCCCATGCCCGCATCCACCGGAAGCAGAAGCCTGGTGGATGCCTGGTTCGTTCCGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR CCA 90 bp AGCGGACAAGAGCAAACACCTCTAGGTGGATGCGGCAGTGCCGTATaGGCCTTCCTTGAGGTCAAGACTGAGTCTGTCAGCCAGCAAGTT +
Preference number: 1 (lower is better)
Translates to: SGQEQTPLGGCGSAV*AFLEVKTESVSQQV
Trigger: AACTTGCTGGCTGACAGACTCAGTCTTGACCTCAAGGAAGGCCCATACGGCACTGCCGCATCCACCTAGAGGTGTTTGCTCTTGTCCGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR CCA 90 bp AGCCGCGGTGAGGACAGGCTTCGTCTCCTCTGCACTGGAACACAGTaGGGGAAACGTTCCCTGCTTATGCCTATGTTACTTAGTGGAACC +
Preference number: 1 (lower is better)
Translates to: SRGEDRLRLLCTGTQ*GKRSLLMPMLLSGT
Trigger: GGTTCCACTAAGTAACATAGGCATAAGCAGGGAACGTTTCCCCCACTGTGTTCCAGTGCAGAGGAGACGAAGCCTGTCCTCACCGCGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR TCA 90 bp CCAAGTGCAGCAACTGTGTTTGAGTGTTGTGGTCTACACAGCCCATaGCACAGGCAACCCACGCCTACGAGAAGGCAAAGGCAGCTTAGC +
Preference number: 1 (lower is better)
Translates to: PSAATVFECCGLHSP*HRQPTPTRRQRQLS
Trigger: GCTAAGCTGCCTTTGCCTTCTCGTAGGCGTGGGTTGCCTGTGTCATGGGCTGTGTAGACCACAACACTCAAACACAGTTGCTGCACTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR GCA 90 bp ATGGTGGGGTTTCCCACAGACGTGACCTTCGTTTGCTTCTGTAGGTaGTCCACCCATTCCTGCAGATCCTGCTGGTTGTTGCACGACACT +
Preference number: 1 (lower is better)
Translates to: MVGFPTDVTFVCFCR*STHSCRSCWLLHDT
Trigger: AGTGTCGTGCAACAACCAGCAGGATCTGCAGGAATGGGTGGAGCACCTACAGAAGCAAACGAAGGTCACGTCTGTGGGAAACCCCACCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469877.5
3UTR GCA 90 bp CCACACGGAGCAGAAGCAGCTTCCCACCCAAGCACCTCTGAACTGTaGGTGAGGAGGCACAATTCAGGGTTGTTTCTCGAGAACACTCAT +
Preference number: 1 (lower is better)
Translates to: PHGAEAASHPSTSEL*VRRHNSGLFLENTH
Trigger: ATGAGTGTTCTCGAGAAACAACCCTGAATTGTGCCTCCTCACGCACAGTTCAGAGGTGCTTGGGTGGGAAGCTGCTTCTGCTCCGTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544132.2
3UTR CCA 90 bp TCTGCTTCCGGTGGATGCGGGCATGGGACTTCTTATTCACGTAGCTaGAAAGGACATTCTAGCATGGGGATTAGCCCGGACAGAACCACC +
Preference number: 1 (lower is better)
Translates to: SASGGCGHGTSYSRS*KGHSSMGISPDRTT
Trigger: GGTGGTTCTGTCCGGGCTAATCCCCATGCTAGAATGTCCTTTCCAGCTACGTGAATAAGAAGTCCCATGCCCGCATCCACCGGAAGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR TCA 90 bp TGCTTTATTCTTGCTGAAGGAGGGGATTTTACTTTCGGTGAGCACTaGAGCCTGCTGGCTACGGCCAATGGTGGAGGAGACCTCGGGATG +
Preference number: 1 (lower is better)
Translates to: CFILAEGGDFTFGEH*SLLATANGGGDLGM
Trigger: CATCCCGAGGTCTCCTCCACCATTGGCCGTAGCCAGCAGGCTTCAGTGCTCACCGAAAGTAAAATCCCCTCCTTCAGCAAGAATAAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR TCA 90 bp AGCTCTGGGCTTGTGAGCAGCAGGACCCGGCTCCCAGGACAAGACTaGTACTGCATCAGAGTTCACTCTGCACAAACAAGATCAGAACAC +
Preference number: 1 (lower is better)
Translates to: SSGLVSSRTRLPGQD*YCIRVHSAQTRSEH
Trigger: GTGTTCTGATCTTGTTTGTGCAGAGTGAACTCTGATGCAGTATCAGTCTTGTCCTGGGAGCCGGGTCCTGCTGCTCACAAGCCCAGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR TCA 90 bp ACGGAGCAGAAGCAGCTTCCCACCCAAGCACCTCTGAACTGTGCGTaGGGAGGCACAATTCAGGGTTGTTTCTCGAGAACACTCATTGGA +
Preference number: 1 (lower is better)
Translates to: TEQKQLPTQAPLNCA*GGTIQGCFSRTLIG
Trigger: TCCAATGAGTGTTCTCGAGAAACAACCCTGAATTGTGCCTCCTCACGCACAGTTCAGAGGTGCTTGGGTGGGAAGCTGCTTCTGCTCCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544132.2
3UTR TCA 90 bp AAGGAAACCAAAAGCAAAGTCCCTGTGGTCACCCTTATTTATTGCTaGAGCAGAACGAAAACCTGCTCCACGGGCCGGGCTTCCTGCCCA +
Preference number: 1 (lower is better)
Translates to: KETKSKVPVVTLIYC*SRTKTCSTGRASCP
Trigger: TGGGCAGGAAGCCCGGCCCGTGGAGCAGGTTTTCGTTCTGCTTCAGCAATAAATAAGGGTGACCACAGGGACTTTGCTTTTGGTTTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR TCA 90 bp GAGATGGCACTGAATGAGGCTTTATGGTGGGGTTTCCCACAGACGTaGCCTTCGTTTGCTTCTGTAGGTGCTCCACCCATTCCTGCAGAT +
Preference number: 1 (lower is better)
Translates to: EMALNEALWWGFPQT*PSFASVGAPPIPAD
Trigger: ATCTGCAGGAATGGGTGGAGCACCTACAGAAGCAAACGAAGGTCACGTCTGTGGGAAACCCCACCATAAAGCCTCATTCAGTGCCATCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469877.5
3UTR CCA 90 bp TGTGTCCATGGCTCTTCCAGACAACATAAGTATGGATGTCAGGGGTaGGGAGCCGGGGGAACTGAAGCCACAGCACTTGACTTTGTAAGT +
Preference number: 1 (lower is better)
Translates to: CVHGSSRQHKYGCQG*GAGGTEATALDFVS
Trigger: ACTTACAAAGTCAAGTGCTGTGGCTTCAGTTCCCCCGGCTCCCCACCCCTGACATCCATACTTATGTTGTCTGGAAGAGCCATGGACACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR CCA 90 bp AAGATCAGAACACTGAATACGTGGGTTTGGCGAAGGAGTGGGCAGTaGGGAAGAAAGAAATCACGGCCACCTGGAATTACAGCCACCCTG +
Preference number: 1 (lower is better)
Translates to: KIRTLNTWVWRRSGQ*GRKKSRPPGITATL
Trigger: CAGGGTGGCTGTAATTCCAGGTGGCCGTGATTTCTTTCTTCCCCACTGCCCACTCCTTCGCCAAACCCACGTATTCAGTGTTCTGATCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR TCA 90 bp CACTGCAATTCAGGGAAGTTTGGGGTGAAGATGCGAGTGAACATCTaGGCCATGACAGTAAGCTCTGCCTTTGGAAAGGAGAGCTCCCAC +
Preference number: 1 (lower is better)
Translates to: HCNSGKFGVKMRVNI*AMTVSSAFGKESSH
Trigger: GTGGGAGCTCTCCTTTCCAAAGGCAGAGCTTACTGTCATGGCTCAGATGTTCACTCGCATCTTCACCCCAAACTTCCCTGAATTGCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR GCA 90 bp GACCCGGCTCCCAGGACAAGACTGATACTGCATCAGAGTTCACTCTaGACAAACAAGATCAGAACACTGAATACGTGGGTTTGGCGAAGG +
Preference number: 1 (lower is better)
Translates to: DPAPRTRLILHQSSL*TNKIRTLNTWVWRR
Trigger: CCTTCGCCAAACCCACGTATTCAGTGTTCTGATCTTGTTTGTGCAGAGTGAACTCTGATGCAGTATCAGTCTTGTCCTGGGAGCCGGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR GCA 90 bp ACCTTCGTTTGCTTCTGTAGGTGCTCCACCCATTCCTGCAGATCCTaGTGGTTGTTGCACGACACTAATATCCGCTCAATCATGCTCCCT +
Preference number: 1 (lower is better)
Translates to: TFVCFCRCSTHSCRS*WLLHDTNIRSIMLP
Trigger: AGGGAGCATGATTGAGCGGATATTAGTGTCGTGCAACAACCAGCAGGATCTGCAGGAATGGGTGGAGCACCTACAGAAGCAAACGAAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469877.5
3UTR GCA 90 bp ACAGACGTGACCTTCGTTTGCTTCTGTAGGTGCTCCACCCATTCCTaGAGATCCTGCTGGTTGTTGCACGACACTAATATCCGCTCAATC +
Preference number: 1 (lower is better)
Translates to: TDVTFVCFCRCSTHS*RSCWLLHDTNIRSI
Trigger: GATTGAGCGGATATTAGTGTCGTGCAACAACCAGCAGGATCTGCAGGAATGGGTGGAGCACCTACAGAAGCAAACGAAGGTCACGTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469877.5
3UTR CCA 90 bp CCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTaGAACTGGGCTCACAGCACCTTTGCTGCATATATTCTTCTCATC +
Preference number: 1 (lower is better)
Translates to: PEPTCCSARLPEHSR*NWAHSTFAAYILLI
Trigger: GATGAGAAGAATATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR TCA 90 bp CAACAACTACCCCTTACGAAGAGCACCCTCGGATGTAGGCTCACGTaGACACACCACCTCCCTCCAATAGTCAGTCATTCGAATGTATAC +
Preference number: 1 (lower is better)
Translates to: QQLPLTKSTLGCRLT*THHLPPIVSHSNVY
Trigger: GTATACATTCGAATGACTGACTATTGGAGGGAGGTGGTGTGTTCACGTGAGCCTACATCCGAGGGTGCTCTTCGTAAGGGGTAGTTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR GCA 90 bp AGGGCAAGGAAGAACCGTAAACAGCAACACAACACTCTCCCAAGGTaGCCAGCTCAAAGGCATCAGTACACAAAGGATTCAGGTGCAGTT +
Preference number: 1 (lower is better)
Translates to: RARKNRKQQHNTLPR*PAQRHQYTKDSGAV
Trigger: AACTGCACCTGAATCCTTTGTGTACTGATGCCTTTGAGCTGGGCACCTTGGGAGAGTGTTGTGTTGCTGTTTACGGTTCTTCCTTGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR CCA 90 bp CCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAACTaGGCTCACAGCACCTTTGCTGCATATATTCTTCTCATCTCTCCA +
Preference number: 1 (lower is better)
Translates to: PTCCSARLPEHSRWN*AHSTFAAYILLISP
Trigger: TGGAGAGATGAGAAGAATATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR CCA 90 bp AGTTCACTCTGCACAAACAAGATCAGAACACTGAATACGTGGGTTTaGCGAAGGAGTGGGCAGTGGGGAAGAAAGAAATCACGGCCACCT +
Preference number: 1 (lower is better)
Translates to: SSLCTNKIRTLNTWV*RRSGQWGRKKSRPP
Trigger: AGGTGGCCGTGATTTCTTTCTTCCCCACTGCCCACTCCTTCGCCAAACCCACGTATTCAGTGTTCTGATCTTGTTTGTGCAGAGTGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR CCA 90 bp TTCGTTTGCTTCTGTAGGTGCTCCACCCATTCCTGCAGATCCTGCTaGTTGTTGCACGACACTAATATCCGCTCAATCATGCTCCCTGAT +
Preference number: 1 (lower is better)
Translates to: FVCFCRCSTHSCRSC*LLHDTNIRSIMLPD
Trigger: ATCAGGGAGCATGATTGAGCGGATATTAGTGTCGTGCAACAACCAGCAGGATCTGCAGGAATGGGTGGAGCACCTACAGAAGCAAACGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469877.5
3UTR GCA 90 bp GGCTTCGTCTCCTCTGCACTGGAACACAGTGGGGGAAACGTTCCCTaGTTATGCCTATGTTACTTAGTGGAACCTAAGGTGTATATTGCT +
Preference number: 1 (lower is better)
Translates to: GFVSSALEHSGGNVP*LCLCYLVEPKVYIA
Trigger: AGCAATATACACCTTAGGTTCCACTAAGTAACATAGGCATAAGCAGGGAACGTTTCCCCCACTGTGTTCCAGTGCAGAGGAGACGAAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR GCA 90 bp GCTTCTGTAGGTGCTCCACCCATTCCTGCAGATCCTGCTGGTTGTTaGACGACACTAATATCCGCTCAATCATGCTCCCTGATAGATAAA +
Preference number: 1 (lower is better)
Translates to: ASVGAPPIPADPAGC*TTLISAQSCSLIDK
Trigger: TTTATCTATCAGGGAGCATGATTGAGCGGATATTAGTGTCGTGCAACAACCAGCAGGATCTGCAGGAATGGGTGGAGCACCTACAGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469877.5
3UTR TCA 90 bp CTATACAGAACCGTCTGTGTCCTCCCAAAACGCAGCAAACTCATCTaGGAATCACAGTACTCAGACAGCGGACAAGAGCAAACACCTCTA +
Preference number: 1 (lower is better)
Translates to: LYRTVCVLPKRSKLI*ESQYSDSGQEQTPL
Trigger: TAGAGGTGTTTGCTCTTGTCCGCTGTCTGAGTACTGTGATTCTCAGATGAGTTTGCTGCGTTTTGGGAGGACACAGACGGTTCTGTATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR CCA 90 bp GGCATGGGACTTCTTATTCACGTAGCTGGAAAGGACATTCTAGCATaGGGATTAGCCCGGACAGAACCACCACAGGTATGCATTCAAAAT +
Preference number: 1 (lower is better)
Translates to: GMGLLIHVAGKDILA*GLARTEPPQVCIQN
Trigger: ATTTTGAATGCATACCTGTGGTGGTTCTGTCCGGGCTAATCCCCATGCTAGAATGTCCTTTCCAGCTACGTGAATAAGAAGTCCCATGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR CCA 90 bp TGCGTGAGGAGGCACAATTCAGGGTTGTTTCTCGAGAACACTCATTaGAAAACAATTCACTACTGCACGAAGAGGGCCAAAGATCTGCAG +
Preference number: 1 (lower is better)
Translates to: CVRRHNSGLFLENTH*KTIHYCTKRAKDLQ
Trigger: CTGCAGATCTTTGGCCCTCTTCGTGCAGTAGTGAATTGTTTTCCAATGAGTGTTCTCGAGAAACAACCCTGAATTGTGCCTCCTCACGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544132.2
3UTR TCA 90 bp CATCTACAGGATAAGAAATGGCTTCATCTCCTCATCCATACAAGGTaGGAGCAAAGGAGTAACCCTCGGGCAAATCGTGGCCCCTTTAAA +
Preference number: 1 (lower is better)
Translates to: HLQDKKWLHLLIHTR*EQRSNPRANRGPFK
Trigger: TTTAAAGGGGCCACGATTTGCCCGAGGGTTACTCCTTTGCTCTCACCTTGTATGGATGAGGAGATGAAGCCATTTCTTATCCTGTAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR TCA 90 bp ATGTGGACAAGCACAGACGCCACTGAGTGTGAAGGAACGAGCTTCTaGTGCTACATTCCAACATCGCTGAAAACTGAAAGTGCTTCACAT +
Preference number: 1 (lower is better)
Translates to: MWTSTDATECEGTSF*CYIPTSLKTESASH
Trigger: ATGTGAAGCACTTTCAGTTTTCAGCGATGTTGGAATGTAGCATCAGAAGCTCGTTCCTTCACACTCAGTGGCGTCTGTGCTTGTCCACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR TCA 90 bp AATAGAGCGTGCATGGGACAGAACACAATTTGGCCCCTCAAGCAATaGCTAGGTGTGGATTTGATGCTACAACTGAATGCAACAGGTCAC +
Preference number: 1 (lower is better)
Translates to: NRACMGQNTIWPLKQ*LGVDLMLQLNATGH
Trigger: GTGACCTGTTGCATTCAGTTGTAGCATCAAATCCACACCTAGTCATTGCTTGAGGGGCCAAATTGTGTTCTGTCCCATGCACGCTCTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR TCA 90 bp ATGATACTTGGTATTAAAGGAAAATCCAAGTGCAGCAACTGTGTTTaGGTGTTGTGGTCTACACAGCCCATGACACAGGCAACCCACGCC +
Preference number: 1 (lower is better)
Translates to: MILGIKGKSKCSNCV*VLWSTQPMTQATHA
Trigger: GGCGTGGGTTGCCTGTGTCATGGGCTGTGTAGACCACAACACTCAAACACAGTTGCTGCACTTGGATTTTCCTTTAATACCAAGTATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR TCA 90 bp TGTATGATAATCCTGTGTTCCGTGAGGACATTCACTGCAGAAGGGTaGTTGGCACAATACGTGAGGTACAGGGTTTTCATCTGTGGCATC +
Preference number: 1 (lower is better)
Translates to: CMIILCSVRTFTAEG*LAQYVRYRVFICGI
Trigger: GATGCCACAGATGAAAACCCTGTACCTCACGTATTGTGCCAATCACCCTTCTGCAGTGAATGTCCTCACGGAACACAGGATTATCATACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469877.5
3UTR CCA 90 bp CTCAGGTCCTCAGAGTCAATCCCTCCTGTCTGGATTCATCAGTCATaGTTTGATCGTCTCCATTCGCAGAATAAGCTCCAGCTTTTCTAT +
Preference number: 1 (lower is better)
Translates to: LRSSESIPPVWIHQS*FDRLHSQNKLQLFY
Trigger: ATAGAAAAGCTGGAGCTTATTCTGCGAATGGAGACGATCAAACCATGACTGATGAATCCAGACAGGAGGGATTGACTCTGAGGACCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR GCA 90 bp GTCTCCTCTGCACTGGAACACAGTGGGGGAAACGTTCCCTGCTTATaGCTATGTTACTTAGTGGAACCTAAGGTGTATATTGCTTTATTC +
Preference number: 1 (lower is better)
Translates to: VSSALEHSGGNVPCL*LCYLVEPKVYIALF
Trigger: GAATAAAGCAATATACACCTTAGGTTCCACTAAGTAACATAGGCATAAGCAGGGAACGTTTCCCCCACTGTGTTCCAGTGCAGAGGAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR CCA 90 bp TCACTGAACTTATTGCAGAATGAGGTAACTGAGATGTTCACAGAGTaGATTGATGTAGCTCAGGTCCTCAGAGTCAATCCCTCCTGTCTG +
Preference number: 1 (lower is better)
Translates to: SLNLLQNEVTEMFTE*IDVAQVLRVNPSCL
Trigger: CAGACAGGAGGGATTGACTCTGAGGACCTGAGCTACATCAATCCACTCTGTGAACATCTCAGTTACCTCATTCTGCAATAAGTTCAGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR TCA 90 bp CTGAGTGTGAAGGAACGAGCTTCTGATGCTACATTCCAACATCGCTaGAAACTGAAAGTGCTTCACATCTACAGGATAAGAAATGGCTTC +
Preference number: 1 (lower is better)
Translates to: LSVKERASDATFQHR*KLKVLHIYRIRNGF
Trigger: GAAGCCATTTCTTATCCTGTAGATGTGAAGCACTTTCAGTTTTCAGCGATGTTGGAATGTAGCATCAGAAGCTCGTTCCTTCACACTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR GCA 90 bp AAAATCCCATTTACTATCTGGCTGAACATACATAAACCCCATCTCTaGCGGAGATTAACACTGGGCTCTGACTGCTCCTCAATGTTCTTA +
Preference number: 1 (lower is better)
Translates to: KIPFTIWLNIHKPHL*RRLTLGSDCSSMFL
Trigger: TAAGAACATTGAGGAGCAGTCAGAGCCCAGTGTTAATCTCCGGCAGAGATGGGGTTTATGTATGTTCAGCCAGATAGTAAATGGGATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR TCA 90 bp GTATCAGCCTGCAGCATGGCCTCCATCTGTTTTCATCAGCTGCAGTaGCTTATAATAAATAATACATTCTATTTACAGGTTCTAGTAAGA +
Preference number: 1 (lower is better)
Translates to: VSACSMASICFHQLQ*LIINNTFYLQVLVR
Trigger: TCTTACTAGAACCTGTAAATAGAATGTATTATTTATTATAAGTCACTGCAGCTGATGAAAACAGATGGAGGCCATGCTGCAGGCTGATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR TCA 90 bp TGGCAACCTAGTAATTCTTCAATGAACTTCAATATCCCATTACAATaGGGCATTGTGGTTTTATACTATGGGGTTGCTGTAAATGGAGTT +
Preference number: 1 (lower is better)
Translates to: WQPSNSSMNFNIPLQ*GIVVLYYGVAVNGV
Trigger: AACTCCATTTACAGCAACCCCATAGTATAAAACCACAATGCCTCATTGTAATGGGATATTGAAGTTCATTGAAGAATTACTAGGTTGCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR TCA 90 bp GTGGGAGGGGTGGGGCAGCGTGTGGTAGGCGGGCGTCAGCGGCGCGGGCTTGCTGCTTGCTGGACGGAGTaGCCGGGTGGGAGGGGAGGG +
Preference number: 2 (lower is better)
Translates to: VGGVGQRVVGGRQRRGLAACWTE*PGGRGG
Trigger: CCCTCCCCTCCCACCCGGTCACTCCGTCCAGCAAGC...AGCAAGCCCGCGCCGCTGACGCCCGCCTACCACACGCTGCCCCACCCCTCCCAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000469877.5
3UTR-3UTR CCA 90 bp AACGAAAACCTGCTCCACGGGCCGGGCTTCCTGCCCAGGACCGCACAGGCTTTCGCTGCCACAGCACGGTaGAGGCCCTGGTGCTGCGGA +
Preference number: 2 (lower is better)
Translates to: NENLLHGPGFLPRTAQAFAATAR*RPWCCG
Trigger: TCCGCAGCACCAGGGCCTCCACCGTGCTGTGGCAGC...GAAAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGTGGAGCAGGTTTTCGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR TCA 90 bp AAAACCTGCTCCACGGGCCGGGCTTCCTGCCCAGGACCGCACAGGCTTTCCAGACCTGCCCTGTGGTCCTaGGTGCACCCCGACTTGGGT +
Preference number: 2 (lower is better)
Translates to: KTCSTGRASCPGPHRLSRPALWS*VHPDLG
Trigger: ACCCAAGTCGGGGTGCACTCAGGACCACAGGGCAGG...TCTGGAAAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGTGGAGCAGGTTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR GCA 90 bp GTGGGAGGGGTGGGGCAGCGTGTGGTAGGCGGGCGTCAGCGGCGCGGGCTTGCTGTTTGCTTCTGTAGGTaGTCCACCCATTCCTGCAGA +
Preference number: 2 (lower is better)
Translates to: VGGVGQRVVGGRQRRGLAVCFCR*STHSCR
Trigger: TCTGCAGGAATGGGTGGAGCACCTACAGAAGCAAAC...AGCAAGCCCGCGCCGCTGACGCCCGCCTACCACACGCTGCCCCACCCCTCCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469877.5
3UTR-3UTR CCA 90 bp GTGGGAGGGGTGGGGCAGCGTGTGGTAGGCGGGCGTCAGCGGCGCGGGCTTGCTCTGAATGAGGCTTTATaGTGGGGTTTCCCACAGACG +
Preference number: 2 (lower is better)
Translates to: VGGVGQRVVGGRQRRGLALNEAL*WGFPQT
Trigger: CGTCTGTGGGAAACCCCACCATAAAGCCTCATTCAG...AGCAAGCCCGCGCCGCTGACGCCCGCCTACCACACGCTGCCCCACCCCTCCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000469877.5
3UTR-3UTR GCA 90 bp AACGAAAACCTGCTCCACGGGCCGGGCTTCCTGCCCAGGACCGCACAGGCTTTCTGGAGGCCCTGGTGCTaGGGAACGAACCAGGCATCC +
Preference number: 2 (lower is better)
Translates to: NENLLHGPGFLPRTAQAFWRPWC*GTNQAS
Trigger: GGATGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCA...GAAAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGTGGAGCAGGTTTTCGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR TCA 90 bp GCGTGTGGTAGGCGGGCGTCAGCGGCGCGGGCTTGCTGTCTGCGTGCTTGCTGGTTCACTGCAGAAGGGTaGTTGGCACAATACGTGAGG +
Preference number: 2 (lower is better)
Translates to: ACGRRASAARACCLRACWFTAEG*LAQYVR
Trigger: CCTCACGTATTGTGCCAATCACCCTTCTGCAGTGAA...CCAGCAAGCACGCAGACAGCAAGCCCGCGCCGCTGACGCCCGCCTACCACACGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469877.5
3UTR-3UTR TCA 90 bp GCGTGTGGTAGGCGGGCGTCAGCGGCGCGGGCTTGCTGTCTGCGTGCTTGCTGGGGTTTCCCACAGACGTaGCCTTCGTTTGCTTCTGTA +
Preference number: 2 (lower is better)
Translates to: ACGRRASAARACCLRACWGFPQT*PSFASV
Trigger: TACAGAAGCAAACGAAGGTCACGTCTGTGGGAAACC...CCAGCAAGCACGCAGACAGCAAGCCCGCGCCGCTGACGCCCGCCTACCACACGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469877.5
3UTR-3UTR TCA 90 bp GCGTGTGGTAGGCGGGCGTCAGCGGCGCGGGCTTGCTGTCTGCGTGCTTGCTGGGGTATGAGATGGCACTaGATGAGGCTTTATGGTGGG +
Preference number: 2 (lower is better)
Translates to: ACGRRASAARACCLRACWGMRWH*MRLYGG
Trigger: CCCACCATAAAGCCTCATTCAGTGCCATCTCATACC...CCAGCAAGCACGCAGACAGCAAGCCCGCGCCGCTGACGCCCGCCTACCACACGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469877.5
3UTR-3UTR GCA 90 bp ACGCCCAGCGCATGTGGACAAGCACAGACGCCACTGAGTGTGAAGGAACGAGCTACGGGCCGGGCTTCCTaGCCAGGACCGCACAGGCTT +
Preference number: 2 (lower is better)
Translates to: TPSACGQAQTPLSVKERATGRAS*PGPHRL
Trigger: AAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGT...AGCTCGTTCCTTCACACTCAGTGGCGTCTGTGCTTGTCCACATGCGCTGGGCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR GCA 90 bp GCGTGTGGTAGGCGGGCGTCAGCGGCGCGGGCTTGCTGTCTGCGTGCTTGCTGGCGTGAGGACATTCACTaGAGAAGGGTGATTGGCACA +
Preference number: 2 (lower is better)
Translates to: ACGRRASAARACCLRACWREDIH*RRVIGT
Trigger: TGTGCCAATCACCCTTCTGCAGTGAATGTCCTCACG...CCAGCAAGCACGCAGACAGCAAGCCCGCGCCGCTGACGCCCGCCTACCACACGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469877.5
3UTR-3UTR GCA 90 bp GCGGCAGTGCCGTATGGGCCTTCCTTGAGGTCAAGACTGAGTCTGTCAGCCAGCTGGAGGCCCTGGTGCTaGGGAACGAACCAGGCATCC +
Preference number: 2 (lower is better)
Translates to: AAVPYGPSLRSRLSLSASWRPWC*GTNQAS
Trigger: GGATGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCA...GCTGGCTGACAGACTCAGTCTTGACCTCAAGGAAGGCCCATACGGCACTGCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp GCGGCAGTGCCGTATGGGCCTTCCTTGAGGTCAAGACTGAGTCTGTCAGCCAGCGAGTGCACCCCGACTTaGGTCAGGGGTGCCCAGCTT +
Preference number: 2 (lower is better)
Translates to: AAVPYGPSLRSRLSLSASECTPT*VRGAQL
Trigger: AAGCTGGGCACCCCTGACCCAAGTCGGGGTGCACTC...GCTGGCTGACAGACTCAGTCTTGACCTCAAGGAAGGCCCATACGGCACTGCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp ACGCCCAGCGCATGTGGACAAGCACAGACGCCACTGAGTGTGAAGGAACGAGCTGCACGGTGGAGGCCCTaGTGCTGCGGAACGAACCAG +
Preference number: 2 (lower is better)
Translates to: TPSACGQAQTPLSVKERAARWRP*CCGTNQ
Trigger: CTGGTTCGTTCCGCAGCACCAGGGCCTCCACCGTGC...AGCTCGTTCCTTCACACTCAGTGGCGTCTGTGCTTGTCCACATGCGCTGGGCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp AAAACCTGCTCCACGGGCCGGGCTTCCTGCCCAGGACCGCACAGGCTTTCCAGAAGCACTGAAGCCTGCTaGCTACGGCCAATGGTGGAG +
Preference number: 2 (lower is better)
Translates to: KTCSTGRASCPGPHRLSRSTEAC*LRPMVE
Trigger: CTCCACCATTGGCCGTAGCCAGCAGGCTTCAGTGCT...TCTGGAAAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGTGGAGCAGGTTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp GCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGCACCCAGAACACAGCCGTTaGAACTGGGCTCACAGCACC +
Preference number: 2 (lower is better)
Translates to: AVRWRQALNTRDARPSVHPEHSR*NWAHST
Trigger: GGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCTGG...GTGCACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR TCA 90 bp GCGTGTGGTAGGCGGGCGTCAGCGGCGCGGGCTTGCTGTCTGCGTGCTTGCTGGTTCTTGACATTGGGCTaGAAGGTTTTTGAAGGCAGC +
Preference number: 2 (lower is better)
Translates to: ACGRRASAARACCLRACWFLTLG*KVFEGS
Trigger: GCTGCCTTCAAAAACCTTTCAGCCCAATGTCAAGAA...CCAGCAAGCACGCAGACAGCAAGCCCGCGCCGCTGACGCCCGCCTACCACACGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469877.5
3UTR-3UTR GCA 90 bp ACGCCCAGCGCATGTGGACAAGCACAGACGCCACTGAGTGTGAAGGAACGAGCTTGGAGGCCCTGGTGCTaGGGAACGAACCAGGCATCC +
Preference number: 2 (lower is better)
Translates to: TPSACGQAQTPLSVKERAWRPWC*GTNQAS
Trigger: GGATGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCA...AGCTCGTTCCTTCACACTCAGTGGCGTCTGTGCTTGTCCACATGCGCTGGGCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR GCA 90 bp AAAACCTGCTCCACGGGCCGGGCTTCCTGCCCAGGACCGCACAGGCTTTCCAGATGTCAGCCAGCAAGTTaGCCTCAGAAACCCGCAGGT +
Preference number: 2 (lower is better)
Translates to: KTCSTGRASCPGPHRLSRCQPAS*PQKPAG
Trigger: ACCTGCGGGTTTCTGAGGGCAACTTGCTGGCTGACA...TCTGGAAAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGTGGAGCAGGTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp ACGCCCAGCGCATGTGGACAAGCACAGACGCCACTGAGTGTGAAGGAACGAGCTGCAGGAGATCCGTCCTaGGGACTCGGACAGCAACGC +
Preference number: 2 (lower is better)
Translates to: TPSACGQAQTPLSVKERAAGDPS*GLGQQR
Trigger: GCGTTGCTGTCCGAGTCCCCAGGACGGATCTCCTGC...AGCTCGTTCCTTCACACTCAGTGGCGTCTGTGCTTGTCCACATGCGCTGGGCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR TCA 90 bp ACAGGCTTCGTCTCCTCTGCACTGGAACACAGTGGGGGAAACGTTCCCTGCTTACCTGCCCTGTGGTCCTaGGTGCACCCCGACTTGGGT +
Preference number: 2 (lower is better)
Translates to: TGFVSSALEHSGGNVPCLPALWS*VHPDLG
Trigger: ACCCAAGTCGGGGTGCACTCAGGACCACAGGGCAGG...TAAGCAGGGAACGTTTCCCCCACTGTGTTCCAGTGCAGAGGAGACGAAGCCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR TCA 90 bp TGTGGTAGGCGGGCGTCAGCGGCGCGGGCTTGCTGTCTGCGTGCTTGCTGGACGGATTGGCACAATACGTaGGGTACAGGGTTTTCATCT +
Preference number: 2 (lower is better)
Translates to: CGRRASAARACCLRACWTDWHNT*GTGFSS
Trigger: AGATGAAAACCCTGTACCTCACGTATTGTGCCAATC...CGTCCAGCAAGCACGCAGACAGCAAGCCCGCGCCGCTGACGCCCGCCTACCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469877.5
3UTR-3UTR TCA 90 bp CGTCAGCGGCGCGGGCTTGCTGTCTGCGTGCTTGCTGGACGGAGTGACCGGGTGGGGCTGAAAGGTTTTTaGAGGCAGCCATGGATTTTT +
Preference number: 2 (lower is better)
Translates to: RQRRGLAVCVLAGRSDRVGLKGF*RQPWIF
Trigger: AAAAATCCATGGCTGCCTTCAAAAACCTTTCAGCCC...CACCCGGTCACTCCGTCCAGCAAGCACGCAGACAGCAAGCCCGCGCCGCTGACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469877.5
3UTR-3UTR GCA 90 bp AAAACCTGCTCCACGGGCCGGGCTTCCTGCCCAGGACCGCACAGGCTTTCCAGATCTGCTTCCGGTGGATaGGGGCATGGGACTTCTTAT +
Preference number: 2 (lower is better)
Translates to: KTCSTGRASCPGPHRLSRSASGG*GHGTSY
Trigger: ATAAGAAGTCCCATGCCCGCATCCACCGGAAGCAGA...TCTGGAAAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGTGGAGCAGGTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR GCA 90 bp AAAACCTGCTCCACGGGCCGGGCTTCCTGCCCAGGACCGCACAGGCTTTCCAGACCATCAGTATCAGCCTaGAGCATGGCCTCCATCTGT +
Preference number: 2 (lower is better)
Translates to: KTCSTGRASCPGPHRLSRPSVSA*SMASIC
Trigger: ACAGATGGAGGCCATGCTGCAGGCTGATACTGATGG...TCTGGAAAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGTGGAGCAGGTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp ACGCCCAGCGCATGTGGACAAGCACAGACGCCACTGAGTGTGAAGGAACGAGCTGGCTACGGCCAATGGTaGAGGAGACCTCGGGATGAG +
Preference number: 2 (lower is better)
Translates to: TPSACGQAQTPLSVKERAGYGQW*RRPRDE
Trigger: CTCATCCCGAGGTCTCCTCCACCATTGGCCGTAGCC...AGCTCGTTCCTTCACACTCAGTGGCGTCTGTGCTTGTCCACATGCGCTGGGCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR TCA 90 bp CTGTGGTCACCCTTATTTATTGCTGAAGCAGAACGAAAACCTGCTCCACGGGCCCCCAGCGAGCCGCGGTaGGGACAGGCTTCGTCTCCT +
Preference number: 2 (lower is better)
Translates to: LWSPLFIAEAERKPAPRAPSEPR*GQASSP
Trigger: AGGAGACGAAGCCTGTCCTCACCGCGGCTCGCTGGG...GGCCCGTGGAGCAGGTTTTCGTTCTGCTTCAGCAATAAATAAGGGTGACCACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR GCA 90 bp ACAGGCTTCGTCTCCTCTGCACTGGAACACAGTGGGGGAAACGTTCCCTGCTTACCCTGTGGTCCTGAGTaGACCCCGACTTGGGTCAGG +
Preference number: 2 (lower is better)
Translates to: TGFVSSALEHSGGNVPCLPCGPE*TPTWVR
Trigger: CCTGACCCAAGTCGGGGTGCACTCAGGACCACAGGG...TAAGCAGGGAACGTTTCCCCCACTGTGTTCCAGTGCAGAGGAGACGAAGCCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR GCA 90 bp ACGCCCAGCGCATGTGGACAAGCACAGACGCCACTGAGTGTGAAGGAACGAGCTAGGCTTCGTCTCCTCTaGACTGGAACACAGTGGGGG +
Preference number: 2 (lower is better)
Translates to: TPSACGQAQTPLSVKERARLRLL*TGTQWG
Trigger: CCCCCACTGTGTTCCAGTGCAGAGGAGACGAAGCCT...AGCTCGTTCCTTCACACTCAGTGGCGTCTGTGCTTGTCCACATGCGCTGGGCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR GCA 90 bp AGAACCGTAAACAGCAACACAACACTCTCCCAAGGTGCCCAGCTCAAAGGCATCACGGGCCGGGCTTCCTaGCCAGGACCGCACAGGCTT +
Preference number: 2 (lower is better)
Translates to: RTVNSNTTLSQGAQLKGITGRAS*PGPHRL
Trigger: AAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGT...GATGCCTTTGAGCTGGGCACCTTGGGAGAGTGTTGTGTTGCTGTTTACGGTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp ACGCCCAGCGCATGTGGACAAGCACAGACGCCACTGAGTGTGAAGGAACGAGCTAGCACTGAAGCCTGCTaGCTACGGCCAATGGTGGAG +
Preference number: 2 (lower is better)
Translates to: TPSACGQAQTPLSVKERASTEAC*LRPMVE
Trigger: CTCCACCATTGGCCGTAGCCAGCAGGCTTCAGTGCT...AGCTCGTTCCTTCACACTCAGTGGCGTCTGTGCTTGTCCACATGCGCTGGGCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR TCA 90 bp GCGGGCATGGGACTTCTTATTCACGTAGCTGGAAAGGACATTCTAGCATGGGGACCTGCCCTGTGGTCCTaGGTGCACCCCGACTTGGGT +
Preference number: 2 (lower is better)
Translates to: AGMGLLIHVAGKDILAWGPALWS*VHPDLG
Trigger: ACCCAAGTCGGGGTGCACTCAGGACCACAGGGCAGG...TCCCCATGCTAGAATGTCCTTTCCAGCTACGTGAATAAGAAGTCCCATGCCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR TCA 90 bp ACAGGCTTCGTCTCCTCTGCACTGGAACACAGTGGGGGAAACGTTCCCTGCTTAACTTTCGGTGAGCACTaGAGCCTGCTGGCTACGGCC +
Preference number: 2 (lower is better)
Translates to: TGFVSSALEHSGGNVPCLTFGEH*SLLATA
Trigger: GGCCGTAGCCAGCAGGCTTCAGTGCTCACCGAAAGT...TAAGCAGGGAACGTTTCCCCCACTGTGTTCCAGTGCAGAGGAGACGAAGCCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR GCA 90 bp ACGCCCAGCGCATGTGGACAAGCACAGACGCCACTGAGTGTGAAGGAACGAGCTGAAGCCAAAGGGGCTTaGTGGGCACCAGAGACTGTA +
Preference number: 2 (lower is better)
Translates to: TPSACGQAQTPLSVKERAEAKGA*WAPETV
Trigger: TACAGTCTCTGGTGCCCAGCAAGCCCCTTTGGCTTC...AGCTCGTTCCTTCACACTCAGTGGCGTCTGTGCTTGTCCACATGCGCTGGGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp AACGAAAACCTGCTCCACGGGCCGGGCTTCCTGCCCAGGACCGCACAGGCTTTCAAGGACATTCTAGCATaGGGATTAGCCCGGACAGAA +
Preference number: 2 (lower is better)
Translates to: NENLLHGPGFLPRTAQAFKDILA*GLARTE
Trigger: TTCTGTCCGGGCTAATCCCCATGCTAGAATGTCCTT...GAAAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGTGGAGCAGGTTTTCGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp CTGTGGTCACCCTTATTTATTGCTGAAGCAGAACGAAAACCTGCTCCACGGGCCGCACGGTGGAGGCCCTaGTGCTGCGGAACGAACCAG +
Preference number: 2 (lower is better)
Translates to: LWSPLFIAEAERKPAPRAARWRP*CCGTNQ
Trigger: CTGGTTCGTTCCGCAGCACCAGGGCCTCCACCGTGC...GGCCCGTGGAGCAGGTTTTCGTTCTGCTTCAGCAATAAATAAGGGTGACCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp AAAACCTGCTCCACGGGCCGGGCTTCCTGCCCAGGACCGCACAGGCTTTCCAGAAGAAACCCGCAGGTCTaGGACTGTAATGCTGCTTTA +
Preference number: 2 (lower is better)
Translates to: KTCSTGRASCPGPHRLSRRNPQV*DCNAAL
Trigger: TAAAGCAGCATTACAGTCCCAGACCTGCGGGTTTCT...TCTGGAAAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGTGGAGCAGGTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR GCA 90 bp CTGTGGTCACCCTTATTTATTGCTGAAGCAGAACGAAAACCTGCTCCACGGGCCTGGAGGCCCTGGTGCTaGGGAACGAACCAGGCATCC +
Preference number: 2 (lower is better)
Translates to: LWSPLFIAEAERKPAPRAWRPWC*GTNQAS
Trigger: GGATGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCA...GGCCCGTGGAGCAGGTTTTCGTTCTGCTTCAGCAATAAATAAGGGTGACCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR GCA 90 bp CCTCTACTACAGTCCAGTAGTCTACACTTGCAGAGGCTGAATGCTTCAGCTTTCACGCCCGCCCGTCTGTaGACCTGCCAAGGCCCAGAG +
Preference number: 2 (lower is better)
Translates to: PLLQSSSLHLQRLNASAFTPARL*TCQGPE
Trigger: CTCTGGGCCTTGGCAGGTGCACAGACGGGCGGGCGT...GAAAGCTGAAGCATTCAGCCTCTGCAAGTGTAGACTACTGGACTGTAGTAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR CCA 90 bp GCGGGCATGGGACTTCTTATTCACGTAGCTGGAAAGGACATTCTAGCATGGGGAGAGTGCACCCCGACTTaGGTCAGGGGTGCCCAGCTT +
Preference number: 2 (lower is better)
Translates to: AGMGLLIHVAGKDILAWGECTPT*VRGAQL
Trigger: AAGCTGGGCACCCCTGACCCAAGTCGGGGTGCACTC...TCCCCATGCTAGAATGTCCTTTCCAGCTACGTGAATAAGAAGTCCCATGCCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp AGAACCGTAAACAGCAACACAACACTCTCCCAAGGTGCCCAGCTCAAAGGCATCGAGTGCACCCCGACTTaGGTCAGGGGTGCCCAGCTT +
Preference number: 2 (lower is better)
Translates to: RTVNSNTTLSQGAQLKGIECTPT*VRGAQL
Trigger: AAGCTGGGCACCCCTGACCCAAGTCGGGGTGCACTC...GATGCCTTTGAGCTGGGCACCTTGGGAGAGTGTTGTGTTGCTGTTTACGGTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp ACGCCCAGCGCATGTGGACAAGCACAGACGCCACTGAGTGTGAAGGAACGAGCTTTAGAAATACCGACATaGGGGGTGCTGCCACAGCAC +
Preference number: 2 (lower is better)
Translates to: TPSACGQAQTPLSVKERALEIPT*GVLPQH
Trigger: GTGCTGTGGCAGCACCCCCCATGTCGGTATTTCTAA...AGCTCGTTCCTTCACACTCAGTGGCGTCTGTGCTTGTCCACATGCGCTGGGCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR TCA 90 bp GCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGCACCTCTCCACAACTACTTaGTCAGTGTTCATAGCACTT +
Preference number: 2 (lower is better)
Translates to: AVRWRQALNTRDARPSVHLSTTT*SVFIAL
Trigger: AAGTGCTATGAACACTGATCAAGTAGTTGTGGAGAG...GTGCACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR TCA 90 bp AAACAATGGCCCTCTGGATGCCACATCGCCACTGCCACAGGAGAACTGTCTTTTGGTCTACACAGCCCATaGCACAGGCAACCCACGCCT +
Preference number: 2 (lower is better)
Translates to: KQWPSGCHIATATGELSFGLHSP*HRQPTP
Trigger: AGGCGTGGGTTGCCTGTGTCATGGGCTGTGTAGACC...AAAAGACAGTTCTCCTGTGGCAGTGGCGATGTGGCATCCAGAGGGCCATTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR GCA 90 bp TCCCAGAGAAGTGAAGAAATGATTGGCATTAAGGAGTCCACACAACCAGGGCAGCGGTGGAGGCCCTGGTaGTGCGGAACGAACCAGGCA +
Preference number: 2 (lower is better)
Translates to: SQRSEEMIGIKESTQPGQRWRPW*CGTNQA
Trigger: TGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCACCG...CTGCCCTGGTTGTGTGGACTCCTTAATGCCAATCATTTCTTCACTTCTCTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp CTGGGGACTCGGACAGCAACGCTACCGGCTCCGAGAGGACAGTTAATGTCGCCTAAGGACATTCTAGCATaGGGATTAGCCCGGACAGAA +
Preference number: 2 (lower is better)
Translates to: LGTRTATLPAPRGQLMSPKDILA*GLARTE
Trigger: TTCTGTCCGGGCTAATCCCCATGCTAGAATGTCCTT...AGGCGACATTAACTGTCCTCTCGGAGCCGGTAGCGTTGCTGTCCGAGTCCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp CTGTGGTCACCCTTATTTATTGCTGAAGCAGAACGAAAACCTGCTCCACGGGCCGGCTTCTGCTTCCGGTaGATGCGGGCATGGGACTTC +
Preference number: 2 (lower is better)
Translates to: LWSPLFIAEAERKPAPRAGFCFR*MRAWDF
Trigger: GAAGTCCCATGCCCGCATCCACCGGAAGCAGAAGCC...GGCCCGTGGAGCAGGTTTTCGTTCTGCTTCAGCAATAAATAAGGGTGACCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp AGAGCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGTCTCCTCCATGGTTCTaGCACTTAGATCACAAACCT +
Preference number: 2 (lower is better)
Translates to: RAVRWRQALNTRDARPSVSPPWF*HLDHKP
Trigger: AGGTTTGTGATCTAAGTGCCAGAACCATGGAGGAGA...CACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR CCA 90 bp CTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGCCAGAGTCTCCTCCATaGTTCTGGCACTTAGATCAC +
Preference number: 2 (lower is better)
Translates to: LPRPRAHMLFCTITRTQPPESPP*FWHLDH
Trigger: GTGATCTAAGTGCCAGAACCATGGAGGAGACTCTGG...CGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR TCA 90 bp ACGGTGGAGGCCCTGGTGCTGCGGAACGAACCAGGCATCCACCAGGCTTCTGCTCTTTTAGTCAGTCACTaGACTTATTGCAGAATGAGG +
Preference number: 2 (lower is better)
Translates to: TVEALVLRNEPGIHQASALLVSH*TYCRMR
Trigger: CCTCATTCTGCAATAAGTTCAGTGACTGACTAAAAG...AGCAGAAGCCTGGTGGATGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCACCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR TCA 90 bp CTTTCGGTGAGCACTGAAGCCTGCTGGCTACGGCCAATGGTGGAGGAGACCTCGACTTCTGAATGGGACTaGAGTGTATCTCTGCAGGTA +
Preference number: 2 (lower is better)
Translates to: LSVSTEACWLRPMVEETSTSEWD*SVSLQV
Trigger: TACCTGCAGAGATACACTTCAGTCCCATTCAGAAGT...CGAGGTCTCCTCCACCATTGGCCGTAGCCAGCAGGCTTCAGTGCTCACCGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR TCA 90 bp CGATTACCAGAACACAGCCGTTGGAACTGGGCTCACAGCACCTTTGCTGCATATGGATGTAGGCTCACGTaGACACACCACCTCCCTCCA +
Preference number: 2 (lower is better)
Translates to: RLPEHSRWNWAHSTFAAYGCRLT*THHLPP
Trigger: TGGAGGGAGGTGGTGTGTTCACGTGAGCCTACATCC...ATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR TCA 90 bp CATCTGAGCCATGACAGTAAGCTCTGCCTTTGGAAAGGAGAGCTCCCACTTCACGGATGTAGGCTCACGTaGACACACCACCTCCCTCCA +
Preference number: 2 (lower is better)
Translates to: HLSHDSKLCLWKGELPLHGCRLT*THHLPP
Trigger: TGGAGGGAGGTGGTGTGTTCACGTGAGCCTACATCC...GTGAAGTGGGAGCTCTCCTTTCCAAAGGCAGAGCTTACTGTCATGGCTCAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR TCA 90 bp CCTCTACTACAGTCCAGTAGTCTACACTTGCAGAGGCTGAATGCTTCAGCTTTCAGCTCTGAACACACGTaGCGCCCGCCCGTCTGTGCA +
Preference number: 2 (lower is better)
Translates to: PLLQSSSLHLQRLNASAFSSEHT*RPPVCA
Trigger: TGCACAGACGGGCGGGCGTCACGTGTGTTCAGAGCT...GAAAGCTGAAGCATTCAGCCTCTGCAAGTGTAGACTACTGGACTGTAGTAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR GCA 90 bp AGAACCGTAAACAGCAACACAACACTCTCCCAAGGTGCCCAGCTCAAAGGCATCGACTTGGGTCAGGGGTaGCCAGCTTCACCTCAGAAC +
Preference number: 2 (lower is better)
Translates to: RTVNSNTTLSQGAQLKGIDLGQG*PASPQN
Trigger: GTTCTGAGGTGAAGCTGGGCACCCCTGACCCAAGTC...GATGCCTTTGAGCTGGGCACCTTGGGAGAGTGTTGTGTTGCTGTTTACGGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR GCA 90 bp CAGCACGGTGGAGGCCCTGGTGCTGCGGAACGAACCAGGCATCCACCAGGCTTCGAACCACCACAGGTATaGATTCAAAATGGGATATTT +
Preference number: 2 (lower is better)
Translates to: QHGGGPGAAERTRHPPGFEPPQV*IQNGIF
Trigger: AAATATCCCATTTTGAATGCATACCTGTGGTGGTTC...GAAGCCTGGTGGATGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCACCGTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR GCA 90 bp AGAACCGTAAACAGCAACACAACACTCTCCCAAGGTGCCCAGCTCAAAGGCATCGTGAGCACTGAAGCCTaGTGGCTACGGCCAATGGTG +
Preference number: 2 (lower is better)
Translates to: RTVNSNTTLSQGAQLKGIVSTEA*WLRPMV
Trigger: CACCATTGGCCGTAGCCAGCAGGCTTCAGTGCTCAC...GATGCCTTTGAGCTGGGCACCTTGGGAGAGTGTTGTGTTGCTGTTTACGGTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR GCA 90 bp AACGAAAACCTGCTCCACGGGCCGGGCTTCCTGCCCAGGACCGCACAGGCTTTCAACGTTCCCTGCTTATaGCTATGTTACTTAGTGGAA +
Preference number: 2 (lower is better)
Translates to: NENLLHGPGFLPRTAQAFNVPCL*LCYLVE
Trigger: TTCCACTAAGTAACATAGGCATAAGCAGGGAACGTT...GAAAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGTGGAGCAGGTTTTCGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR GCA 90 bp CAAAGGAGTAACCCTCGGGCAAATCGTGGCCCCTTTAAACGTTTATATCAAGTTACGGGCCGGGCTTCCTaGCCAGGACCGCACAGGCTT +
Preference number: 2 (lower is better)
Translates to: QRSNPRANRGPFKRLYQVTGRAS*PGPHRL
Trigger: AAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGT...AACTTGATATAAACGTTTAAAGGGGCCACGATTTGCCCGAGGGTTACTCCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR GCA 90 bp ACGCCCAGCGCATGTGGACAAGCACAGACGCCACTGAGTGTGAAGGAACGAGCTCAGACGCATTTTTCCTaGTCCCTAAAAAGCCGAGGA +
Preference number: 2 (lower is better)
Translates to: TPSACGQAQTPLSVKERAQTHFS*SLKSRG
Trigger: TCCTCGGCTTTTTAGGGAGCAGGAAAAATGCGTCTG...AGCTCGTTCCTTCACACTCAGTGGCGTCTGTGCTTGTCCACATGCGCTGGGCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp TTTGTTGTTACTGAACTAGCCTATACAGAACCGTCTGTGTCCTCCCAAAACGCAGCTGCCACAGCACGGTaGAGGCCCTGGTGCTGCGGA +
Preference number: 2 (lower is better)
Translates to: FVVTELAYTEPSVSSQNAAATAR*RPWCCG
Trigger: TCCGCAGCACCAGGGCCTCCACCGTGCTGTGGCAGC...TGCGTTTTGGGAGGACACAGACGGTTCTGTATAGGCTAGTTCAGTAACAACAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp AGAACCGTAAACAGCAACACAACACTCTCCCAAGGTGCCCAGCTCAAAGGCATCTGCGGCAGTGCCGTATaGGCCTTCCTTGAGGTCAAG +
Preference number: 2 (lower is better)
Translates to: RTVNSNTTLSQGAQLKGICGSAV*AFLEVK
Trigger: CTTGACCTCAAGGAAGGCCCATACGGCACTGCCGCA...GATGCCTTTGAGCTGGGCACCTTGGGAGAGTGTTGTGTTGCTGTTTACGGTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp CCTCTGCACTGGAACACAGTGGGGGAAACGTTCCCTGCTTATGCCTATGTTACTTGCGGCAGTGCCGTATaGGCCTTCCTTGAGGTCAAG +
Preference number: 2 (lower is better)
Translates to: PLHWNTVGETFPAYAYVTCGSAV*AFLEVK
Trigger: CTTGACCTCAAGGAAGGCCCATACGGCACTGCCGCA...AGTAACATAGGCATAAGCAGGGAACGTTTCCCCCACTGTGTTCCAGTGCAGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR TCA 90 bp ACGCCCAGCGCATGTGGACAAGCACAGACGCCACTGAGTGTGAAGGAACGAGCTTCATCAGTCATGGTTTaGTCGTCTCCATTCGCAGAA +
Preference number: 2 (lower is better)
Translates to: TPSACGQAQTPLSVKERASSVMV*SSPFAE
Trigger: TTCTGCGAATGGAGACGATCAAACCATGACTGATGA...AGCTCGTTCCTTCACACTCAGTGGCGTCTGTGCTTGTCCACATGCGCTGGGCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR TCA 90 bp CTGGGGACTCGGACAGCAACGCTACCGGCTCCGAGAGGACAGTTAATGTCGCCTGACAAGAGTTGTTCCTaGGTTAAAACCTGCTACAAC +
Preference number: 2 (lower is better)
Translates to: LGTRTATLPAPRGQLMSPDKSCS*VKTCYN
Trigger: GTTGTAGCAGGTTTTAACTCAGGAACAACTCTTGTC...AGGCGACATTAACTGTCCTCTCGGAGCCGGTAGCGTTGCTGTCCGAGTCCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR GCA 90 bp CATCTGAGAATCACAGTACTCAGACAGCGGACAAGAGCAAACACCTCTAGGTGGGACTTGGGTCAGGGGTaGCCAGCTTCACCTCAGAAC +
Preference number: 2 (lower is better)
Translates to: HLRITVLRQRTRANTSRWDLGQG*PASPQN
Trigger: GTTCTGAGGTGAAGCTGGGCACCCCTGACCCAAGTC...CCACCTAGAGGTGTTTGCTCTTGTCCGCTGTCTGAGTACTGTGATTCTCAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR GCA 90 bp TTTGTTGTTACTGAACTAGCCTATACAGAACCGTCTGTGTCCTCCCAAAACGCACGGTGGAGGCCCTGGTaGTGCGGAACGAACCAGGCA +
Preference number: 2 (lower is better)
Translates to: FVVTELAYTEPSVSSQNARWRPW*CGTNQA
Trigger: TGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCACCG...TGCGTTTTGGGAGGACACAGACGGTTCTGTATAGGCTAGTTCAGTAACAACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp CCTGCTACAACAGCAAACTCCAATAAACTCAAGTTGAATGGTTTCCCACTGCAAGCTGCCACAGCACGGTaGAGGCCCTGGTGCTGCGGA +
Preference number: 2 (lower is better)
Translates to: PATTANSNKLKLNGFPLQAATAR*RPWCCG
Trigger: TCCGCAGCACCAGGGCCTCCACCGTGCTGTGGCAGC...TTGCAGTGGGAAACCATTCAACTTGAGTTTATTGGAGTTTGCTGTTGTAGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp AGAGCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGCTCCACAAAGTACAATaGGAAATATCAGGAACACTC +
Preference number: 2 (lower is better)
Translates to: RAVRWRQALNTRDARPSVLHKVQ*EISGTL
Trigger: GAGTGTTCCTGATATTTCCCATTGTACTTTGTGGAG...CACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR CCA 90 bp CATCTGAGCCATGACAGTAAGCTCTGCCTTTGGAAAGGAGAGCTCCCACTTCACCACAGCCGTTGGAACTaGGCTCACAGCACCTTTGCT +
Preference number: 2 (lower is better)
Translates to: HLSHDSKLCLWKGELPLHHSRWN*AHSTFA
Trigger: AGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTG...GTGAAGTGGGAGCTCTCCTTTCCAAAGGCAGAGCTTACTGTCATGGCTCAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR CCA 90 bp GTGGGGAAGAAAGAAATCACGGCCACCTGGAATTACAGCCACCCTGAAGAAGGACACAGCCGTTGGAACTaGGCTCACAGCACCTTTGCT +
Preference number: 2 (lower is better)
Translates to: VGKKEITATWNYSHPEEGHSRWN*AHSTFA
Trigger: AGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTG...TCCTTCTTCAGGGTGGCTGTAATTCCAGGTGGCCGTGATTTCTTTCTTCCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR CCA 90 bp AAACAATGGCCCTCTGGATGCCACATCGCCACTGCCACAGGAGAACTGTCTTTTCACAGCCGTTGGAACTaGGCTCACAGCACCTTTGCT +
Preference number: 2 (lower is better)
Translates to: KQWPSGCHIATATGELSFHSRWN*AHSTFA
Trigger: AGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTG...AAAAGACAGTTCTCCTGTGGCAGTGGCGATGTGGCATCCAGAGGGCCATTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR CCA 90 bp AAACAATGGCCCTCTGGATGCCACATCGCCACTGCCACAGGAGAACTGTCTTTTCTGAATACGTGGGTTTaGCGAAGGAGTGGGCAGTGG +
Preference number: 2 (lower is better)
Translates to: KQWPSGCHIATATGELSFLNTWV*RRSGQW
Trigger: CCACTGCCCACTCCTTCGCCAAACCCACGTATTCAG...AAAAGACAGTTCTCCTGTGGCAGTGGCGATGTGGCATCCAGAGGGCCATTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR TCA 90 bp ACGCCCAGCGCATGTGGACAAGCACAGACGCCACTGAGTGTGAAGGAACGAGCTAAATCTGATGCGCAATaGGTTGTTCTGAGACCAGTA +
Preference number: 2 (lower is better)
Translates to: TPSACGQAQTPLSVKERAKSDAQ*VVLRPV
Trigger: TACTGGTCTCAGAACAACTCATTGCGCATCAGATTT...AGCTCGTTCCTTCACACTCAGTGGCGTCTGTGCTTGTCCACATGCGCTGGGCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR TCA 90 bp CTGGGGACTCGGACAGCAACGCTACCGGCTCCGAGAGGACAGTTAATGTCGCCTCCAATAAACTCAAGTTaGATGGTTTCCCACTGCAAT +
Preference number: 2 (lower is better)
Translates to: LGTRTATLPAPRGQLMSPPINSS*MVSHCN
Trigger: ATTGCAGTGGGAAACCATTCAACTTGAGTTTATTGG...AGGCGACATTAACTGTCCTCTCGGAGCCGGTAGCGTTGCTGTCCGAGTCCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR TCA 90 bp CCTCTACTACAGTCCAGTAGTCTACACTTGCAGAGGCTGAATGCTTCAGCTTTCGGATGTAGGCTCACGTaGACACACCACCTCCCTCCA +
Preference number: 2 (lower is better)
Translates to: PLLQSSSLHLQRLNASAFGCRLT*THHLPP
Trigger: TGGAGGGAGGTGGTGTGTTCACGTGAGCCTACATCC...GAAAGCTGAAGCATTCAGCCTCTGCAAGTGTAGACTACTGGACTGTAGTAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR GCA 90 bp TCCCAGAGAAGTGAAGAAATGATTGGCATTAAGGAGTCCACACAACCAGGGCAGGACTTGGGTCAGGGGTaGCCAGCTTCACCTCAGAAC +
Preference number: 2 (lower is better)
Translates to: SQRSEEMIGIKESTQPGQDLGQG*PASPQN
Trigger: GTTCTGAGGTGAAGCTGGGCACCCCTGACCCAAGTC...CTGCCCTGGTTGTGTGGACTCCTTAATGCCAATCATTTCTTCACTTCTCTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR GCA 90 bp AAAGGAAACCAAAAGCAAAGTCCCTGTGGTCACCCTTATTTATTGCTGAAGCAGCGGTGGAGGCCCTGGTaGTGCGGAACGAACCAGGCA +
Preference number: 2 (lower is better)
Translates to: KGNQKQSPCGHPYLLLKQRWRPW*CGTNQA
Trigger: TGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCACCG...CTGCTTCAGCAATAAATAAGGGTGACCACAGGGACTTTGCTTTTGGTTTCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR GCA 90 bp TATCAAGTTCCCACCCCCTTGGGAGGTCACACGGTGAAACAGACACAGTTATATGTGAGCACTGAAGCCTaGTGGCTACGGCCAATGGTG +
Preference number: 2 (lower is better)
Translates to: YQVPTPLGGHTVKQTQLYVSTEA*WLRPMV
Trigger: CACCATTGGCCGTAGCCAGCAGGCTTCAGTGCTCAC...ATATAACTGTGTCTGTTTCACCGTGTGACCTCCCAAGGGGGTGGGAACTTGATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR GCA 90 bp CAAAGGAGTAACCCTCGGGCAAATCGTGGCCCCTTTAAACGTTTATATCAAGTTGGTGAGGCCAGGTTCTaGAGCATGGGGCAGGTCCAC +
Preference number: 2 (lower is better)
Translates to: QRSNPRANRGPFKRLYQVGEARF*SMGQVH
Trigger: GTGGACCTGCCCCATGCTGCAGAACCTGGCCTCACC...AACTTGATATAAACGTTTAAAGGGGCCACGATTTGCCCGAGGGTTACTCCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR GCA 90 bp TCCCAGAGAAGTGAAGAAATGATTGGCATTAAGGAGTCCACACAACCAGGGCAGGCATTAAGGCAGGTCTaGAGGAGATCCGTCCTGGGG +
Preference number: 2 (lower is better)
Translates to: SQRSEEMIGIKESTQPGQALRQV*RRSVLG
Trigger: CCCCAGGACGGATCTCCTGCAGACCTGCCTTAATGC...CTGCCCTGGTTGTGTGGACTCCTTAATGCCAATCATTTCTTCACTTCTCTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR GCA 90 bp GACCTGGGACATGTAAGTGACGTTGCCCAGAGTTTTAATGTCATCGCCCTCCCAGCTTCCGTCAGGATCTaGAGCTCAAGCTCTTTCCTC +
Preference number: 2 (lower is better)
Translates to: DLGHVSDVAQSFNVIALPASVRI*SSSSFL
Trigger: GAGGAAAGAGCTTGAGCTGCAGATCCTGACGGAAGC...TGGGAGGGCGATGACATTAAAACTCTGGGCAACGTCACTTACATGTCCCAGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469877.5
3UTR-3UTR CCA 90 bp CTGGGGACTCGGACAGCAACGCTACCGGCTCCGAGAGGACAGTTAATGTCGCCTTCTTATTCACGTAGCTaGAAAGGACATTCTAGCATG +
Preference number: 2 (lower is better)
Translates to: LGTRTATLPAPRGQLMSPSYSRS*KGHSSM
Trigger: CATGCTAGAATGTCCTTTCCAGCTACGTGAATAAGA...AGGCGACATTAACTGTCCTCTCGGAGCCGGTAGCGTTGCTGTCCGAGTCCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp AGGGGAAGGGCTGTTAAAAACACAAGTATTCTTGTGAAATACTTCGATCTGAGCGCTGCCACAGCACGGTaGAGGCCCTGGTGCTGCGGA +
Preference number: 2 (lower is better)
Translates to: RGRAVKNTSILVKYFDLSAATAR*RPWCCG
Trigger: TCCGCAGCACCAGGGCCTCCACCGTGCTGTGGCAGC...GCTCAGATCGAAGTATTTCACAAGAATACTTGTGTTTTTAACAGCCCTTCCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp ACCTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCTCTCCTCCATGGTTCTaGCACTTAGATCACAAACCT +
Preference number: 2 (lower is better)
Translates to: TCQGPEPTCCSARLPEHSSPPWF*HLDHKP
Trigger: AGGTTTGTGATCTAAGTGCCAGAACCATGGAGGAGA...GCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR CCA 90 bp CCTCTACTACAGTCCAGTAGTCTACACTTGCAGAGGCTGAATGCTTCAGCTTTCCCAGAACACAGCCGTTaGAACTGGGCTCACAGCACC +
Preference number: 2 (lower is better)
Translates to: PLLQSSSLHLQRLNASAFPEHSR*NWAHST
Trigger: GGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCTGG...GAAAGCTGAAGCATTCAGCCTCTGCAAGTGTAGACTACTGGACTGTAGTAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR CCA 90 bp AAAGTAGAAACAATGGCCCTCTGGATGCCACATCGCCACTGCCACAGGAGAACTCACAGAGCCGTGAGGTaGAGACAAGCTCTGAACACA +
Preference number: 2 (lower is better)
Translates to: KVETMALWMPHRHCHRRTHRAVR*RQALNT
Trigger: TGTGTTCAGAGCTTGTCTCCACCTCACGGCTCTGTG...AGTTCTCCTGTGGCAGTGGCGATGTGGCATCCAGAGGGCCATTGTTTCTACTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR CAA 90 bp AGGAAAGGAAACCAAAAGCAAAGTCCCTGTGGTCACCCTTATTTATaGCTGAAGCAGAACGAAAACCTGCTCCACGGGCCGGGCTTCCTG +
Preference number: 2 (lower is better)
Translates to: RKGNQKQSPCGHPYL*LKQNENLLHGPGFL
Trigger: CAGGAAGCCCGGCCCGTGGAGCAGGTTTTCGTTCTGCTTCAGCAATAAATAAGGGTGACCACAGGGACTTTGCTTTTGGTTTCCTTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR CAA 90 bp CCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTaGGAACTGGGCTCACAGCACCTTTGCTGCATATATTCTTCTCAT +
Preference number: 2 (lower is better)
Translates to: PRAHMLFCTITRTQP*ELGSQHLCCIYSSH
Trigger: ATGAGAAGAATATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR CAA 90 bp GAGTTCACTCTGCACAAACAAGATCAGAACACTGAATACGTGGGTTaGGCGAAGGAGTGGGCAGTGGGGAAGAAAGAAATCACGGCCACC +
Preference number: 2 (lower is better)
Translates to: EFTLHKQDQNTEYVG*AKEWAVGKKEITAT
Trigger: GGTGGCCGTGATTTCTTTCTTCCCCACTGCCCACTCCTTCGCCAAACCCACGTATTCAGTGTTCTGATCTTGTTTGTGCAGAGTGAACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR TCA 90 bp CAGAGTTTTAATGTCATCGCCCTCCCAGTTCCGGATGGCTTCCGTCAGGATCTGAGACCTCAGAGTTTCTaGAGGACAACAGCAACAACC +
Preference number: 2 (lower is better)
Translates to: QSFNVIALPVPDGFRQDLRPQSF*RTTATT
Trigger: GGTTGTTGCTGTTGTCCTTCAGAAACTCTGAGGTCT...CAGATCCTGACGGAAGCCATCCGGAACTGGGAGGGCGATGACATTAAAACTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469877.5
3UTR-3UTR GCA 90 bp TCCCAGAGAAGTGAAGAAATGATTGGCATTAAGGAGTCCACACAACCAGGGCAGTGTCAGCCAGCAAGTTaGCCTCAGAAACCCGCAGGT +
Preference number: 2 (lower is better)
Translates to: SQRSEEMIGIKESTQPGQCQPAS*PQKPAG
Trigger: ACCTGCGGGTTTCTGAGGGCAACTTGCTGGCTGACA...CTGCCCTGGTTGTGTGGACTCCTTAATGCCAATCATTTCTTCACTTCTCTGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR GCA 90 bp CAAAGGAGTAACCCTCGGGCAAATCGTGGCCCCTTTAAACGTTTATATCAAGTTAGCAGAACGAAAACCTaGTCCACGGGCCGGGCTTCC +
Preference number: 2 (lower is better)
Translates to: QRSNPRANRGPFKRLYQVSRTKT*STGRAS
Trigger: GGAAGCCCGGCCCGTGGAGCAGGTTTTCGTTCTGCT...AACTTGATATAAACGTTTAAAGGGGCCACGATTTGCCCGAGGGTTACTCCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR GCA 90 bp GCTTGTTCCATGCTGAATGAAGCCACCCAACTTTCTAAACAACGTGCTACTGCCGGCCCAGAGCCCACATaGTGTTCTGCACGATTACCA +
Preference number: 2 (lower is better)
Translates to: ACSMLNEATQLSKQRATAGPEPT*CSARLP
Trigger: TGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCC...GGCAGTAGCACGTTGTTTAGAAAGTTGGGTGGCTTCATTCAGCATGGAACAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR CCA 90 bp AAAGGAAACCAAAAGCAAAGTCCCTGTGGTCACCCTTATTTATTGCTGAAGCAGATACAGAGAGCAAGGTaGCGCCCCACCCAGCCCTGC +
Preference number: 2 (lower is better)
Translates to: KGNQKQSPCGHPYLLLKQIQRAR*RPTQPC
Trigger: GCAGGGCTGGGTGGGGCGCCACCTTGCTCTCTGTAT...CTGCTTCAGCAATAAATAAGGGTGACCACAGGGACTTTGCTTTTGGTTTCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp CATCTGAGAATCACAGTACTCAGACAGCGGACAAGAGCAAACACCTCTAGGTGGTTAGAAATACCGACATaGGGGGTGCTGCCACAGCAC +
Preference number: 2 (lower is better)
Translates to: HLRITVLRQRTRANTSRWLEIPT*GVLPQH
Trigger: GTGCTGTGGCAGCACCCCCCATGTCGGTATTTCTAA...CCACCTAGAGGTGTTTGCTCTTGTCCGCTGTCTGAGTACTGTGATTCTCAGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp TATCAAGTTCCCACCCCCTTGGGAGGTCACACGGTGAAACAGACACAGTTATATGCAAACACCTCTAGGTaGATGCGGCAGTGCCGTATG +
Preference number: 2 (lower is better)
Translates to: YQVPTPLGGHTVKQTQLYANTSR*MRQCRM
Trigger: CATACGGCACTGCCGCATCCACCTAGAGGTGTTTGC...ATATAACTGTGTCTGTTTCACCGTGTGACCTCCCAAGGGGGTGGGAACTTGATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp CAAAGGAGTAACCCTCGGGCAAATCGTGGCCCCTTTAAACGTTTATATCAAGTTGCTGGCTACGGCCAATaGTGGAGGAGACCTCGGGAT +
Preference number: 2 (lower is better)
Translates to: QRSNPRANRGPFKRLYQVAGYGQ*WRRPRD
Trigger: ATCCCGAGGTCTCCTCCACCATTGGCCGTAGCCAGC...AACTTGATATAAACGTTTAAAGGGGCCACGATTTGCCCGAGGGTTACTCCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR CAA 90 bp GTTTGCTTCTGTAGGTGCTCCACCCATTCCTGCAGATCCTGCTGGTaGTTGCACGACACTAATATCCGCTCAATCATGCTCCCTGATAGA +
Preference number: 2 (lower is better)
Translates to: VCFCRCSTHSCRSCW*LHDTNIRSIMLPDR
Trigger: TCTATCAGGGAGCATGATTGAGCGGATATTAGTGTCGTGCAACAACCAGCAGGATCTGCAGGAATGGGTGGAGCACCTACAGAAGCAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469877.5
3UTR-3UTR TCA 90 bp AAAACAGTGTATTTTGTTGTTACTGAACTAGCCTATACAGAACCGTCTGTGTCCCCTGCCCTGTGGTCCTaGGTGCACCCCGACTTGGGT +
Preference number: 2 (lower is better)
Translates to: KTVYFVVTELAYTEPSVSPALWS*VHPDLG
Trigger: ACCCAAGTCGGGGTGCACTCAGGACCACAGGGCAGG...GGACACAGACGGTTCTGTATAGGCTAGTTCAGTAACAACAAAATACACTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR TCA 90 bp ATCTACAGGATAAGAAATGGCTTCATCTCCTCATCCATACAAGGTGAGAGCAAAGGCAATGCCGTAACATaGGGCCCTCATGGCCGCACC +
Preference number: 2 (lower is better)
Translates to: IYRIRNGFISSSIQGESKGNAVT*GPHGRT
Trigger: GGTGCGGCCATGAGGGCCTCATGTTACGGCATTGCC...TTTGCTCTCACCTTGTATGGATGAGGAGATGAAGCCATTTCTTATCCTGTAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR TCA 90 bp GGATTTGATGCTACAACTGAATGCAACAGGTCACATTCAGTGCTTTTTGAAGCAGGTGGAGACAAGCTCTaGACACACGTGACGCCCGCC +
Preference number: 2 (lower is better)
Translates to: GFDATTECNRSHSVLFEAGGDKL*THVTPA
Trigger: GGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACC...TGCTTCAAAAAGCACTGAATGTGACCTGTTGCATTCAGTTGTAGCATCAAATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR TCA 90 bp AAAGTAGAAACAATGGCCCTCTGGATGCCACATCGCCACTGCCACAGGAGAACTATGCGAGTGAACATCTaGGCCATGACAGTAAGCTCT +
Preference number: 2 (lower is better)
Translates to: KVETMALWMPHRHCHRRTMRVNI*AMTVSS
Trigger: AGAGCTTACTGTCATGGCTCAGATGTTCACTCGCAT...AGTTCTCCTGTGGCAGTGGCGATGTGGCATCCAGAGGGCCATTGTTTCTACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR GCA 90 bp CAAAGGAGTAACCCTCGGGCAAATCGTGGCCCCTTTAAACGTTTATATCAAGTTGACTTGGGTCAGGGGTaGCCAGCTTCACCTCAGAAC +
Preference number: 2 (lower is better)
Translates to: QRSNPRANRGPFKRLYQVDLGQG*PASPQN
Trigger: GTTCTGAGGTGAAGCTGGGCACCCCTGACCCAAGTC...AACTTGATATAAACGTTTAAAGGGGCCACGATTTGCCCGAGGGTTACTCCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR GCA 90 bp CAAAGGAGTAACCCTCGGGCAAATCGTGGCCCCTTTAAACGTTTATATCAAGTTGCATTAAGGCAGGTCTaGAGGAGATCCGTCCTGGGG +
Preference number: 2 (lower is better)
Translates to: QRSNPRANRGPFKRLYQVALRQV*RRSVLG
Trigger: CCCCAGGACGGATCTCCTGCAGACCTGCCTTAATGC...AACTTGATATAAACGTTTAAAGGGGCCACGATTTGCCCGAGGGTTACTCCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp AGGGGAAGGGCTGTTAAAAACACAAGTATTCTTGTGAAATACTTCGATCTGAGCGAGTGCACCCCGACTTaGGTCAGGGGTGCCCAGCTT +
Preference number: 2 (lower is better)
Translates to: RGRAVKNTSILVKYFDLSECTPT*VRGAQL
Trigger: AAGCTGGGCACCCCTGACCCAAGTCGGGGTGCACTC...GCTCAGATCGAAGTATTTCACAAGAATACTTGTGTTTTTAACAGCCCTTCCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp ACAGGCTTCGTCTCCTCTGCACTGGAACACAGTGGGGGAAACGTTCCCTGCTTATCAATCCCTCCTGTCTaGATTCATCAGTCATGGTTT +
Preference number: 2 (lower is better)
Translates to: TGFVSSALEHSGGNVPCLSIPPV*IHQSWF
Trigger: AAACCATGACTGATGAATCCAGACAGGAGGGATTGA...TAAGCAGGGAACGTTTCCCCCACTGTGTTCCAGTGCAGAGGAGACGAAGCCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp GTGTATTTTGTTGTTACTGAACTAGCCTATACAGAACCGTCTGTGTCCTCCCAAGGCTTCTGCTTCCGGTaGATGCGGGCATGGGACTTC +
Preference number: 2 (lower is better)
Translates to: VYFVVTELAYTEPSVSSQGFCFR*MRAWDF
Trigger: GAAGTCCCATGCCCGCATCCACCGGAAGCAGAAGCC...TTGGGAGGACACAGACGGTTCTGTATAGGCTAGTTCAGTAACAACAAAATACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp AGAACCGTAAACAGCAACACAACACTCTCCCAAGGTGCCCAGCTCAAAGGCATCAGAAACCCGCAGGTCTaGGACTGTAATGCTGCTTTA +
Preference number: 2 (lower is better)
Translates to: RTVNSNTTLSQGAQLKGIRNPQV*DCNAAL
Trigger: TAAAGCAGCATTACAGTCCCAGACCTGCGGGTTTCT...GATGCCTTTGAGCTGGGCACCTTGGGAGAGTGTTGTGTTGCTGTTTACGGTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp CTGTGGTCACCCTTATTTATTGCTGAAGCAGAACGAAAACCTGCTCCACGGGCCTATCAGCCTGCAGCATaGCCTCCATCTGTTTTCATC +
Preference number: 2 (lower is better)
Translates to: LWSPLFIAEAERKPAPRAYQPAA*PPSVFI
Trigger: GATGAAAACAGATGGAGGCCATGCTGCAGGCTGATA...GGCCCGTGGAGCAGGTTTTCGTTCTGCTTCAGCAATAAATAAGGGTGACCACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp AAAGGAAACCAAAAGCAAAGTCCCTGTGGTCACCCTTATTTATTGCTGAAGCAGGCTGGCTACGGCCAATaGTGGAGGAGACCTCGGGAT +
Preference number: 2 (lower is better)
Translates to: KGNQKQSPCGHPYLLLKQAGYGQ*WRRPRD
Trigger: ATCCCGAGGTCTCCTCCACCATTGGCCGTAGCCAGC...CTGCTTCAGCAATAAATAAGGGTGACCACAGGGACTTTGCTTTTGGTTTCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp ATCTACAGGATAAGAAATGGCTTCATCTCCTCATCCATACAAGGTGAGAGCAAAGCAGGAGATCCGTCCTaGGGACTCGGACAGCAACGC +
Preference number: 2 (lower is better)
Translates to: IYRIRNGFISSSIQGESKAGDPS*GLGQQR
Trigger: GCGTTGCTGTCCGAGTCCCCAGGACGGATCTCCTGC...TTTGCTCTCACCTTGTATGGATGAGGAGATGAAGCCATTTCTTATCCTGTAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp AAACAATGGCCCTCTGGATGCCACATCGCCACTGCCACAGGAGAACTGTCTTTTAGTAAGCTCTGCCTTTaGAAAGGAGAGCTCCCACTT +
Preference number: 2 (lower is better)
Translates to: KQWPSGCHIATATGELSFSKLCL*KGELPL
Trigger: AAGTGGGAGCTCTCCTTTCCAAAGGCAGAGCTTACT...AAAAGACAGTTCTCCTGTGGCAGTGGCGATGTGGCATCCAGAGGGCCATTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR CCA 90 bp CCATTAGCTTGTTCCATGCTGAATGAAGCCACCCAACTTTCTAAACAACGTGCTTATGGATGTCAGGGGTaGGGAGCCGGGGGAACTGAA +
Preference number: 2 (lower is better)
Translates to: PLACSMLNEATQLSKQRAYGCQG*GAGGTE
Trigger: TTCAGTTCCCCCGGCTCCCCACCCCTGACATCCATA...AGCACGTTGTTTAGAAAGTTGGGTGGCTTCATTCAGCATGGAACAAGCTAATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR CCA 90 bp GCTTGTTCCATGCTGAATGAAGCCACCCAACTTTCTAAACAACGTGCTACTGCCGGTTTGGCGAAGGAGTaGGCAGTGGGGAAGAAAGAA +
Preference number: 2 (lower is better)
Translates to: ACSMLNEATQLSKQRATAGLAKE*AVGKKE
Trigger: TTCTTTCTTCCCCACTGCCCACTCCTTCGCCAAACC...GGCAGTAGCACGTTGTTTAGAAAGTTGGGTGGCTTCATTCAGCATGGAACAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR CAA 90 bp CACCCAAGCACCTCTGAACTGTGCGTGAGGAGGCACAATTCAGGGTaGTTTCTCGAGAACACTCATTGGAAAACAATTCACTACTGCACG +
Preference number: 2 (lower is better)
Translates to: HPSTSELCVRRHNSG*FLENTHWKTIHYCT
Trigger: CGTGCAGTAGTGAATTGTTTTCCAATGAGTGTTCTCGAGAAACAACCCTGAATTGTGCCTCCTCACGCACAGTTCAGAGGTGCTTGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544132.2
3UTR-3UTR TCA 90 bp AAACAATGGCCCTCTGGATGCCACATCGCCACTGCCACAGGAGAACTGTCTTTTAAGCAGAAATTGGTCTaGGTGAGGCCAGTGAAAACT +
Preference number: 2 (lower is better)
Translates to: KQWPSGCHIATATGELSFKQKLV*VRPVKT
Trigger: AGTTTTCACTGGCCTCACTCAGACCAATTTCTGCTT...AAAAGACAGTTCTCCTGTGGCAGTGGCGATGTGGCATCCAGAGGGCCATTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR TCA 90 bp AAACAATGGCCCTCTGGATGCCACATCGCCACTGCCACAGGAGAACTGTCTTTTATTAACACTGGGCTCTaGCTGCTCCTCAATGTTCTT +
Preference number: 2 (lower is better)
Translates to: KQWPSGCHIATATGELSFINTGL*LLLNVL
Trigger: AAGAACATTGAGGAGCAGTCAGAGCCCAGTGTTAAT...AAAAGACAGTTCTCCTGTGGCAGTGGCGATGTGGCATCCAGAGGGCCATTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR CCA 90 bp CATCTGAGAATCACAGTACTCAGACAGCGGACAAGAGCAAACACCTCTAGGTGGAAGGACATTCTAGCATaGGGATTAGCCCGGACAGAA +
Preference number: 2 (lower is better)
Translates to: HLRITVLRQRTRANTSRWKDILA*GLARTE
Trigger: TTCTGTCCGGGCTAATCCCCATGCTAGAATGTCCTT...CCACCTAGAGGTGTTTGCTCTTGTCCGCTGTCTGAGTACTGTGATTCTCAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp AAAGGAAACCAAAAGCAAAGTCCCTGTGGTCACCCTTATTTATTGCTGAAGCAGTGCGGCAGTGCCGTATaGGCCTTCCTTGAGGTCAAG +
Preference number: 2 (lower is better)
Translates to: KGNQKQSPCGHPYLLLKQCGSAV*AFLEVK
Trigger: CTTGACCTCAAGGAAGGCCCATACGGCACTGCCGCA...CTGCTTCAGCAATAAATAAGGGTGACCACAGGGACTTTGCTTTTGGTTTCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp ATCTACAGGATAAGAAATGGCTTCATCTCCTCATCCATACAAGGTGAGAGCAAAGGCTACGGCCAATGGTaGAGGAGACCTCGGGATGAG +
Preference number: 2 (lower is better)
Translates to: IYRIRNGFISSSIQGESKGYGQW*RRPRDE
Trigger: CTCATCCCGAGGTCTCCTCCACCATTGGCCGTAGCC...TTTGCTCTCACCTTGTATGGATGAGGAGATGAAGCCATTTCTTATCCTGTAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp CAAAGGAGTAACCCTCGGGCAAATCGTGGCCCCTTTAAACGTTTATATCAAGTTTCGTCTCCTCTGCACTaGAACACAGTGGGGGAAACG +
Preference number: 2 (lower is better)
Translates to: QRSNPRANRGPFKRLYQVSSPLH*NTVGET
Trigger: CGTTTCCCCCACTGTGTTCCAGTGCAGAGGAGACGA...AACTTGATATAAACGTTTAAAGGGGCCACGATTTGCCCGAGGGTTACTCCTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp CCATTAGCTTGTTCCATGCTGAATGAAGCCACCCAACTTTCTAAACAACGTGCTCTGAATACGTGGGTTTaGCGAAGGAGTGGGCAGTGG +
Preference number: 2 (lower is better)
Translates to: PLACSMLNEATQLSKQRALNTWV*RRSGQW
Trigger: CCACTGCCCACTCCTTCGCCAAACCCACGTATTCAG...AGCACGTTGTTTAGAAAGTTGGGTGGCTTCATTCAGCATGGAACAAGCTAATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR CAA 90 bp GTGCGTGAGGAGGCACAATTCAGGGTTGTTTCTCGAGAACACTCATaGGAAAACAATTCACTACTGCACGAAGAGGGCCAAAGATCTGCA +
Preference number: 2 (lower is better)
Translates to: VREEAQFRVVSREHS*ENNSLLHEEGQRSA
Trigger: TGCAGATCTTTGGCCCTCTTCGTGCAGTAGTGAATTGTTTTCCAATGAGTGTTCTCGAGAAACAACCCTGAATTGTGCCTCCTCACGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544132.2
3UTR-3UTR TCA 90 bp TCCCAGAGAAGTGAAGAAATGATTGGCATTAAGGAGTCCACACAACCAGGGCAGCGCAGCAAACTCATCTaGGAATCACAGTACTCAGAC +
Preference number: 2 (lower is better)
Translates to: SQRSEEMIGIKESTQPGQRSKLI*ESQYSD
Trigger: GTCTGAGTACTGTGATTCTCAGATGAGTTTGCTGCG...CTGCCCTGGTTGTGTGGACTCCTTAATGCCAATCATTTCTTCACTTCTCTGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR TCA 90 bp AGAACCGTAAACAGCAACACAACACTCTCCCAAGGTGCCCAGCTCAAAGGCATCACCCTTATTTATTGCTaGAGCAGAACGAAAACCTGC +
Preference number: 2 (lower is better)
Translates to: RTVNSNTTLSQGAQLKGITLIYC*SRTKTC
Trigger: GCAGGTTTTCGTTCTGCTTCAGCAATAAATAAGGGT...GATGCCTTTGAGCTGGGCACCTTGGGAGAGTGTTGTGTTGCTGTTTACGGTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR TCA 90 bp GTGGGGAAGAAAGAAATCACGGCCACCTGGAATTACAGCCACCCTGAAGAAGGACTCTCCACAACTACTTaGTCAGTGTTCATAGCACTT +
Preference number: 2 (lower is better)
Translates to: VGKKEITATWNYSHPEEGLSTTT*SVFIAL
Trigger: AAGTGCTATGAACACTGATCAAGTAGTTGTGGAGAG...TCCTTCTTCAGGGTGGCTGTAATTCCAGGTGGCCGTGATTTCTTTCTTCCCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR GCA 90 bp TCCACCAGGCTTCTGCTTCCGGTGGATGCGGGCATGGGACTTCTTATTCACGTAGAACCACCACAGGTATaGATTCAAAATGGGATATTT +
Preference number: 2 (lower is better)
Translates to: STRLLLPVDAGMGLLIHVEPPQV*IQNGIF
Trigger: AAATATCCCATTTTGAATGCATACCTGTGGTGGTTC...TACGTGAATAAGAAGTCCCATGCCCGCATCCACCGGAAGCAGAAGCCTGGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR GCA 90 bp GCTTGTTCCATGCTGAATGAAGCCACCCAACTTTCTAAACAACGTGCTACTGCCCTTGCAGAGGCTGAATaGTTCAGCTTTCGGGCTTTA +
Preference number: 2 (lower is better)
Translates to: ACSMLNEATQLSKQRATALAEAE*FSFRAL
Trigger: TAAAGCCCGAAAGCTGAAGCATTCAGCCTCTGCAAG...GGCAGTAGCACGTTGTTTAGAAAGTTGGGTGGCTTCATTCAGCATGGAACAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR GCA 90 bp AAAGTAGAAACAATGGCCCTCTGGATGCCACATCGCCACTGCCACAGGAGAACTGATGCTACAACTGAATaGAACAGGTCACATTCAGTG +
Preference number: 2 (lower is better)
Translates to: KVETMALWMPHRHCHRRTDATTE*NRSHSV
Trigger: CACTGAATGTGACCTGTTGCATTCAGTTGTAGCATC...AGTTCTCCTGTGGCAGTGGCGATGTGGCATCCAGAGGGCCATTGTTTCTACTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR CCA 90 bp CCTCTGCACTGGAACACAGTGGGGGAAACGTTCCCTGCTTATGCCTATGTTACTTGGATTCATCAGTCATaGTTTGATCGTCTCCATTCG +
Preference number: 2 (lower is better)
Translates to: PLHWNTVGETFPAYAYVTWIHQS*FDRLHS
Trigger: CGAATGGAGACGATCAAACCATGACTGATGAATCCA...AGTAACATAGGCATAAGCAGGGAACGTTTCCCCCACTGTGTTCCAGTGCAGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp GCGGGCATGGGACTTCTTATTCACGTAGCTGGAAAGGACATTCTAGCATGGGGATCAATCCCTCCTGTCTaGATTCATCAGTCATGGTTT +
Preference number: 2 (lower is better)
Translates to: AGMGLLIHVAGKDILAWGSIPPV*IHQSWF
Trigger: AAACCATGACTGATGAATCCAGACAGGAGGGATTGA...TCCCCATGCTAGAATGTCCTTTCCAGCTACGTGAATAAGAAGTCCCATGCCCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp AGAACCGTAAACAGCAACACAACACTCTCCCAAGGTGCCCAGCTCAAAGGCATCTCAATCCCTCCTGTCTaGATTCATCAGTCATGGTTT +
Preference number: 2 (lower is better)
Translates to: RTVNSNTTLSQGAQLKGISIPPV*IHQSWF
Trigger: AAACCATGACTGATGAATCCAGACAGGAGGGATTGA...GATGCCTTTGAGCTGGGCACCTTGGGAGAGTGTTGTGTTGCTGTTTACGGTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp TCCCAGAGAAGTGAAGAAATGATTGGCATTAAGGAGTCCACACAACCAGGGCAGAAGGACATTCTAGCATaGGGATTAGCCCGGACAGAA +
Preference number: 2 (lower is better)
Translates to: SQRSEEMIGIKESTQPGQKDILA*GLARTE
Trigger: TTCTGTCCGGGCTAATCCCCATGCTAGAATGTCCTT...CTGCCCTGGTTGTGTGGACTCCTTAATGCCAATCATTTCTTCACTTCTCTGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp TTTGTTGTTACTGAACTAGCCTATACAGAACCGTCTGTGTCCTCCCAAAACGCATTAGAAATACCGACATaGGGGGTGCTGCCACAGCAC +
Preference number: 2 (lower is better)
Translates to: FVVTELAYTEPSVSSQNALEIPT*GVLPQH
Trigger: GTGCTGTGGCAGCACCCCCCATGTCGGTATTTCTAA...TGCGTTTTGGGAGGACACAGACGGTTCTGTATAGGCTAGTTCAGTAACAACAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp GTGTATTTTGTTGTTACTGAACTAGCCTATACAGAACCGTCTGTGTCCTCCCAAGCAAACACCTCTAGGTaGATGCGGCAGTGCCGTATG +
Preference number: 2 (lower is better)
Translates to: VYFVVTELAYTEPSVSSQANTSR*MRQCRM
Trigger: CATACGGCACTGCCGCATCCACCTAGAGGTGTTTGC...TTGGGAGGACACAGACGGTTCTGTATAGGCTAGTTCAGTAACAACAAAATACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp ACGGTGAAACAGACACAGTTATATACAACAGGGCAGGTTTTTAAAAAGAGTTGCGCTGGCTACGGCCAATaGTGGAGGAGACCTCGGGAT +
Preference number: 2 (lower is better)
Translates to: TVKQTQLYTTGQVFKKSCAGYGQ*WRRPRD
Trigger: ATCCCGAGGTCTCCTCCACCATTGGCCGTAGCCAGC...GCAACTCTTTTTAAAAACCTGCCCTGTTGTATATAACTGTGTCTGTTTCACCGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp ATCTACAGGATAAGAAATGGCTTCATCTCCTCATCCATACAAGGTGAGAGCAAAAGCACTGAAGCCTGCTaGCTACGGCCAATGGTGGAG +
Preference number: 2 (lower is better)
Translates to: IYRIRNGFISSSIQGESKSTEAC*LRPMVE
Trigger: CTCCACCATTGGCCGTAGCCAGCAGGCTTCAGTGCT...TTTGCTCTCACCTTGTATGGATGAGGAGATGAAGCCATTTCTTATCCTGTAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp GCTTGTTCCATGCTGAATGAAGCCACCCAACTTTCTAAACAACGTGCTACTGCCAGTAAGCTCTGCCTTTaGAAAGGAGAGCTCCCACTT +
Preference number: 2 (lower is better)
Translates to: ACSMLNEATQLSKQRATASKLCL*KGELPL
Trigger: AAGTGGGAGCTCTCCTTTCCAAAGGCAGAGCTTACT...GGCAGTAGCACGTTGTTTAGAAAGTTGGGTGGCTTCATTCAGCATGGAACAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR CCA 90 bp CCTCTACTACAGTCCAGTAGTCTACACTTGCAGAGGCTGAATGCTTCAGCTTTCAGTAAGCTCTGCCTTTaGAAAGGAGAGCTCCCACTT +
Preference number: 2 (lower is better)
Translates to: PLLQSSSLHLQRLNASAFSKLCL*KGELPL
Trigger: AAGTGGGAGCTCTCCTTTCCAAAGGCAGAGCTTACT...GAAAGCTGAAGCATTCAGCCTCTGCAAGTGTAGACTACTGGACTGTAGTAGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR CCA 90 bp CCATTAGCTTGTTCCATGCTGAATGAAGCCACCCAACTTTCTAAACAACGTGCTGGTTTGGCGAAGGAGTaGGCAGTGGGGAAGAAAGAA +
Preference number: 2 (lower is better)
Translates to: PLACSMLNEATQLSKQRAGLAKE*AVGKKE
Trigger: TTCTTTCTTCCCCACTGCCCACTCCTTCGCCAAACC...AGCACGTTGTTTAGAAAGTTGGGTGGCTTCATTCAGCATGGAACAAGCTAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR CAA 90 bp CACGATTACCAGAACACAGCCGTTGGAACTGGGCTCACAGCACCTTaGCTGCATATATTCTTCTCATCTCTCCACAACTACTTGATCAGT +
Preference number: 2 (lower is better)
Translates to: HDYQNTAVGTGLTAP*LHIFFSSLHNYLIS
Trigger: ACTGATCAAGTAGTTGTGGAGAGATGAGAAGAATATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR TCA 90 bp CAAAGGAGTAACCCTCGGGCAAATCGTGGCCCCTTTAAACGTTTATATCAAGTTGTTCACAGAGTGGATTaGTGTAGCTCAGGTCCTCAG +
Preference number: 2 (lower is better)
Translates to: QRSNPRANRGPFKRLYQVVHRVD*CSSGPQ
Trigger: CTGAGGACCTGAGCTACATCAATCCACTCTGTGAAC...AACTTGATATAAACGTTTAAAGGGGCCACGATTTGCCCGAGGGTTACTCCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR TCA 90 bp TCCCAGAGAAGTGAAGAAATGATTGGCATTAAGGAGTCCACACAACCAGGGCAGACTTCTGAATGGGACTaGAGTGTATCTCTGCAGGTA +
Preference number: 2 (lower is better)
Translates to: SQRSEEMIGIKESTQPGQTSEWD*SVSLQV
Trigger: TACCTGCAGAGATACACTTCAGTCCCATTCAGAAGT...CTGCCCTGGTTGTGTGGACTCCTTAATGCCAATCATTTCTTCACTTCTCTGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR GCA 90 bp CTGTGGTCACCCTTATTTATTGCTGAAGCAGAACGAAAACCTGCTCCACGGGCCAACGTTCCCTGCTTATaGCTATGTTACTTAGTGGAA +
Preference number: 2 (lower is better)
Translates to: LWSPLFIAEAERKPAPRANVPCL*LCYLVE
Trigger: TTCCACTAAGTAACATAGGCATAAGCAGGGAACGTT...GGCCCGTGGAGCAGGTTTTCGTTCTGCTTCAGCAATAAATAAGGGTGACCACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR GCA 90 bp GTGGGGAAGAAAGAAATCACGGCCACCTGGAATTACAGCCACCCTGAAGAAGGATCACAGCACCTTTGCTaGATATATTCTTCTCATCTC +
Preference number: 2 (lower is better)
Translates to: VGKKEITATWNYSHPEEGSQHLC*IYSSHL
Trigger: GAGATGAGAAGAATATATGCAGCAAAGGTGCTGTGA...TCCTTCTTCAGGGTGGCTGTAATTCCAGGTGGCCGTGATTTCTTTCTTCCCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR CCA 90 bp TATCAAGTTCCCACCCCCTTGGGAGGTCACACGGTGAAACAGACACAGTTATATGAGATGTTCACAGAGTaGATTGATGTAGCTCAGGTC +
Preference number: 2 (lower is better)
Translates to: YQVPTPLGGHTVKQTQLYEMFTE*IDVAQV
Trigger: GACCTGAGCTACATCAATCCACTCTGTGAACATCTC...ATATAACTGTGTCTGTTTCACCGTGTGACCTCCCAAGGGGGTGGGAACTTGATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp TCCCAGAGAAGTGAAGAAATGATTGGCATTAAGGAGTCCACACAACCAGGGCAGGAGATGTTCACAGAGTaGATTGATGTAGCTCAGGTC +
Preference number: 2 (lower is better)
Translates to: SQRSEEMIGIKESTQPGQEMFTE*IDVAQV
Trigger: GACCTGAGCTACATCAATCCACTCTGTGAACATCTC...CTGCCCTGGTTGTGTGGACTCCTTAATGCCAATCATTTCTTCACTTCTCTGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp CCTCTGCACTGGAACACAGTGGGGGAAACGTTCCCTGCTTATGCCTATGTTACTTCTTATTCACGTAGCTaGAAAGGACATTCTAGCATG +
Preference number: 2 (lower is better)
Translates to: PLHWNTVGETFPAYAYVTSYSRS*KGHSSM
Trigger: CATGCTAGAATGTCCTTTCCAGCTACGTGAATAAGA...AGTAACATAGGCATAAGCAGGGAACGTTTCCCCCACTGTGTTCCAGTGCAGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp AGGGGAAGGGCTGTTAAAAACACAAGTATTCTTGTGAAATACTTCGATCTGAGCGCAAACACCTCTAGGTaGATGCGGCAGTGCCGTATG +
Preference number: 2 (lower is better)
Translates to: RGRAVKNTSILVKYFDLSANTSR*MRQCRM
Trigger: CATACGGCACTGCCGCATCCACCTAGAGGTGTTTGC...GCTCAGATCGAAGTATTTCACAAGAATACTTGTGTTTTTAACAGCCCTTCCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp CATCTGAGCCATGACAGTAAGCTCTGCCTTTGGAAAGGAGAGCTCCCACTTCACCTCCACAAAGTACAATaGGAAATATCAGGAACACTC +
Preference number: 2 (lower is better)
Translates to: HLSHDSKLCLWKGELPLHLHKVQ*EISGTL
Trigger: GAGTGTTCCTGATATTTCCCATTGTACTTTGTGGAG...GTGAAGTGGGAGCTCTCCTTTCCAAAGGCAGAGCTTACTGTCATGGCTCAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR CCA 90 bp AGAACACAGCCGTTGGAACTGGGCTCACAGCACCTTTGCTGCATATATTCTTCTTCTCCTCCATGGTTCTaGCACTTAGATCACAAACCT +
Preference number: 2 (lower is better)
Translates to: RTQPLELGSQHLCCIYSSSPPWF*HLDHKP
Trigger: AGGTTTGTGATCTAAGTGCCAGAACCATGGAGGAGA...AGAAGAATATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR CCA 90 bp GTGGGGAAGAAAGAAATCACGGCCACCTGGAATTACAGCCACCCTGAAGAAGGAGAGTTTCACTGCAGCTaGTTGCTGAAAATAATGATG +
Preference number: 2 (lower is better)
Translates to: VGKKEITATWNYSHPEEGEFHCS*LLKIMM
Trigger: CATCATTATTTTCAGCAACCAGCTGCAGTGAAACTC...TCCTTCTTCAGGGTGGCTGTAATTCCAGGTGGCCGTGATTTCTTTCTTCCCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR CAA 90 bp GGTCCTCAGAGTCAATCCCTCCTGTCTGGATTCATCAGTCATGGTTaGATCGTCTCCATTCGCAGAATAAGCTCCAGCTTTTCTATATAC +
Preference number: 2 (lower is better)
Translates to: GPQSQSLLSGFISHG*IVSIRRISSSFSIY
Trigger: GTATATAGAAAAGCTGGAGCTTATTCTGCGAATGGAGACGATCAAACCATGACTGATGAATCCAGACAGGAGGGATTGACTCTGAGGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR TCA 90 bp GTGTATTTTGTTGTTACTGAACTAGCCTATACAGAACCGTCTGTGTCCTCCCAAGTTCACAGAGTGGATTaGTGTAGCTCAGGTCCTCAG +
Preference number: 2 (lower is better)
Translates to: VYFVVTELAYTEPSVSSQVHRVD*CSSGPQ
Trigger: CTGAGGACCTGAGCTACATCAATCCACTCTGTGAAC...TTGGGAGGACACAGACGGTTCTGTATAGGCTAGTTCAGTAACAACAAAATACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR TCA 90 bp AGGGGAAGGGCTGTTAAAAACACAAGTATTCTTGTGAAATACTTCGATCTGAGCGGATTTTACTTTCGGTaGGCACTGAAGCCTGCTGGC +
Preference number: 2 (lower is better)
Translates to: RGRAVKNTSILVKYFDLSGFYFR*ALKPAG
Trigger: GCCAGCAGGCTTCAGTGCTCACCGAAAGTAAAATCC...GCTCAGATCGAAGTATTTCACAAGAATACTTGTGTTTTTAACAGCCCTTCCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR TCA 90 bp AGAACCGTAAACAGCAACACAACACTCTCCCAAGGTGCCCAGCTCAAAGGCATCTTGCTTTATTCTTGCTaGAGGAGGGGATTTTACTTT +
Preference number: 2 (lower is better)
Translates to: RTVNSNTTLSQGAQLKGILLYSC*RRGFYF
Trigger: AAAGTAAAATCCCCTCCTTCAGCAAGAATAAAGCAA...GATGCCTTTGAGCTGGGCACCTTGGGAGAGTGTTGTGTTGCTGTTTACGGTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR TCA 90 bp TCCCAGAGAAGTGAAGAAATGATTGGCATTAAGGAGTCCACACAACCAGGGCAGGACAAGAGTTGTTCCTaGGTTAAAACCTGCTACAAC +
Preference number: 2 (lower is better)
Translates to: SQRSEEMIGIKESTQPGQDKSCS*VKTCYN
Trigger: GTTGTAGCAGGTTTTAACTCAGGAACAACTCTTGTC...CTGCCCTGGTTGTGTGGACTCCTTAATGCCAATCATTTCTTCACTTCTCTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR TCA 90 bp AGAACACAGCCGTTGGAACTGGGCTCACAGCACCTTTGCTGCATATATTCTTCTCTCTCCACAACTACTTaGTCAGTGTTCATAGCACTT +
Preference number: 2 (lower is better)
Translates to: RTQPLELGSQHLCCIYSSLSTTT*SVFIAL
Trigger: AAGTGCTATGAACACTGATCAAGTAGTTGTGGAGAG...AGAAGAATATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR GCA 90 bp GTGGGGAAGAAAGAAATCACGGCCACCTGGAATTACAGCCACCCTGAAGAAGGATACAGGCTTGCTATGTaGCTTATAACAGAAATCACT +
Preference number: 2 (lower is better)
Translates to: VGKKEITATWNYSHPEEGYRLAM*LITEIT
Trigger: AGTGATTTCTGTTATAAGGCACATAGCAAGCCTGTA...TCCTTCTTCAGGGTGGCTGTAATTCCAGGTGGCCGTGATTTCTTTCTTCCCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR GCA 90 bp GAACTGTGCGTGAGGAGGCACAATTCAGGGTTGTTTCTCGAGAACACTCATTGGAAAACAATTCACTACTaGACGAAGAGGGCCAAAGAT +
Preference number: 2 (lower is better)
Translates to: ELCVRRHNSGLFLENTHWKTIHY*TKRAKD
Trigger: ATCTTTGGCCCTCTTCGTGCAGTAGTGAATTGTTTT...CCAATGAGTGTTCTCGAGAAACAACCCTGAATTGTGCCTCCTCACGCACAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544132.2
3UTR-3UTR CCA 90 bp TATCAAGTTCCCACCCCCTTGGGAGGTCACACGGTGAAACAGACACAGTTATATTGGATTCATCAGTCATaGTTTGATCGTCTCCATTCG +
Preference number: 2 (lower is better)
Translates to: YQVPTPLGGHTVKQTQLYWIHQS*FDRLHS
Trigger: CGAATGGAGACGATCAAACCATGACTGATGAATCCA...ATATAACTGTGTCTGTTTCACCGTGTGACCTCCCAAGGGGGTGGGAACTTGATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp CAAAGGAGTAACCCTCGGGCAAATCGTGGCCCCTTTAAACGTTTATATCAAGTTAGAAACCCGCAGGTCTaGGACTGTAATGCTGCTTTA +
Preference number: 2 (lower is better)
Translates to: QRSNPRANRGPFKRLYQVRNPQV*DCNAAL
Trigger: TAAAGCAGCATTACAGTCCCAGACCTGCGGGTTTCT...AACTTGATATAAACGTTTAAAGGGGCCACGATTTGCCCGAGGGTTACTCCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp CAAAGGAGTAACCCTCGGGCAAATCGTGGCCCCTTTAAACGTTTATATCAAGTTTATCAGCCTGCAGCATaGCCTCCATCTGTTTTCATC +
Preference number: 2 (lower is better)
Translates to: QRSNPRANRGPFKRLYQVYQPAA*PPSVFI
Trigger: GATGAAAACAGATGGAGGCCATGCTGCAGGCTGATA...AACTTGATATAAACGTTTAAAGGGGCCACGATTTGCCCGAGGGTTACTCCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp CCATTAGCTTGTTCCATGCTGAATGAAGCCACCCAACTTTCTAAACAACGTGCTTGGGGTTGCTGTAAATaGAGTTTCACTGCAGCTGGT +
Preference number: 2 (lower is better)
Translates to: PLACSMLNEATQLSKQRAWGCCK*SFTAAG
Trigger: ACCAGCTGCAGTGAAACTCCATTTACAGCAACCCCA...AGCACGTTGTTTAGAAAGTTGGGTGGCTTCATTCAGCATGGAACAAGCTAATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR CAA 90 bp TACTTGTGGCAAGCGTTATTTCAAAGGGAACACCATTTAGGCCATTaGCAAAGGCCTGGTGATGGCTTAAACCTACCTTCTAGTTCAGAC +
Preference number: 2 (lower is better)
Translates to: YLWQALFQREHHLGH*QRPGDGLNLPSSSD
Trigger: GTCTGAACTAGAAGGTAGGTTTAAGCCATCACCAGGCCTTTGCAAATGGCCTAAATGGTGTTCCCTTTGAAATAACGCTTGCCACAAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR TCA 90 bp TCCCAGAGAAGTGAAGAAATGATTGGCATTAAGGAGTCCACACAACCAGGGCAGCTTTTAGTCAGTCACTaGACTTATTGCAGAATGAGG +
Preference number: 2 (lower is better)
Translates to: SQRSEEMIGIKESTQPGQLLVSH*TYCRMR
Trigger: CCTCATTCTGCAATAAGTTCAGTGACTGACTAAAAG...CTGCCCTGGTTGTGTGGACTCCTTAATGCCAATCATTTCTTCACTTCTCTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR TCA 90 bp GTGTATTTTGTTGTTACTGAACTAGCCTATACAGAACCGTCTGTGTCCTCCCAACGCAGCAAACTCATCTaGGAATCACAGTACTCAGAC +
Preference number: 2 (lower is better)
Translates to: VYFVVTELAYTEPSVSSQRSKLI*ESQYSD
Trigger: GTCTGAGTACTGTGATTCTCAGATGAGTTTGCTGCG...TTGGGAGGACACAGACGGTTCTGTATAGGCTAGTTCAGTAACAACAAAATACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR TCA 90 bp CCTGCTACAACAGCAAACTCCAATAAACTCAAGTTGAATGGTTTCCCACTGCAATTGCTTGTGCCCGCATaGGTGAATGATCTGCTAAGT +
Preference number: 2 (lower is better)
Translates to: PATTANSNKLKLNGFPLQLLVPA*VNDLLS
Trigger: ACTTAGCAGATCATTCACTCATGCGGGCACAAGCAA...TTGCAGTGGGAAACCATTCAACTTGAGTTTATTGGAGTTTGCTGTTGTAGCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR TCA 90 bp CAAAGGAGTAACCCTCGGGCAAATCGTGGCCCCTTTAAACGTTTATATCAAGTTTGGGAGGTCACACGGTaGAACAGACACAGTTATATA +
Preference number: 2 (lower is better)
Translates to: QRSNPRANRGPFKRLYQVWEVTR*NRHSYI
Trigger: TATATAACTGTGTCTGTTTCACCGTGTGACCTCCCA...AACTTGATATAAACGTTTAAAGGGGCCACGATTTGCCCGAGGGTTACTCCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR GCA 90 bp AGAACACAGCCGTTGGAACTGGGCTCACAGCACCTTTGCTGCATATATTCTTCTCTAAGAAAAGCAGGCTaGGATACAACAAGCATTTGT +
Preference number: 2 (lower is better)
Translates to: RTQPLELGSQHLCCIYSSLRKAG*DTTSIC
Trigger: ACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAG...AGAAGAATATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR GCA 90 bp GCTTGTTCCATGCTGAATGAAGCCACCCAACTTTCTAAACAACGTGCTACTGCCCTAAGAAAAGCAGGCTaGGATACAACAAGCATTTGT +
Preference number: 2 (lower is better)
Translates to: ACSMLNEATQLSKQRATALRKAG*DTTSIC
Trigger: ACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAG...GGCAGTAGCACGTTGTTTAGAAAGTTGGGTGGCTTCATTCAGCATGGAACAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR GCA 90 bp GGATTTGATGCTACAACTGAATGCAACAGGTCACATTCAGTGCTTTTTGAAGCAGCCCACATGCTGTTCTaGACGATTACCAGAACACAG +
Preference number: 2 (lower is better)
Translates to: GFDATTECNRSHSVLFEAAHMLF*TITRTQ
Trigger: CTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGC...TGCTTCAAAAAGCACTGAATGTGACCTGTTGCATTCAGTTGTAGCATCAAATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR GCA 90 bp GAAATTGGTCTGAGTGAGGCCAGTGAAAACTCCTTACAACAAATCCCAGGAAAACTTGCAGAGGCTGAATaGTTCAGCTTTCGGGCTTTA +
Preference number: 2 (lower is better)
Translates to: EIGLSEASENSLQQIPGKLAEAE*FSFRAL
Trigger: TAAAGCCCGAAAGCTGAAGCATTCAGCCTCTGCAAG...TTTTCCTGGGATTTGTTGTAAGGAGTTTTCACTGGCCTCACTCAGACCAATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR CCA 90 bp ACGGTGAAACAGACACAGTTATATACAACAGGGCAGGTTTTTAAAAAGAGTTGCTGCACTGGAACACAGTaGGGGAAACGTTCCCTGCTT +
Preference number: 2 (lower is better)
Translates to: TVKQTQLYTTGQVFKKSCCTGTQ*GKRSLL
Trigger: AAGCAGGGAACGTTTCCCCCACTGTGTTCCAGTGCA...GCAACTCTTTTTAAAAACCTGCCCTGTTGTATATAACTGTGTCTGTTTCACCGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp GGATTTGATGCTACAACTGAATGCAACAGGTCACATTCAGTGCTTTTTGAAGCACCAGAGTCTCCTCCATaGTTCTGGCACTTAGATCAC +
Preference number: 2 (lower is better)
Translates to: GFDATTECNRSHSVLFEAPESPP*FWHLDH
Trigger: GTGATCTAAGTGCCAGAACCATGGAGGAGACTCTGG...TGCTTCAAAAAGCACTGAATGTGACCTGTTGCATTCAGTTGTAGCATCAAATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR CAA 90 bp TGCCTATGTTACTTAGTGGAACCTAAGGTGTATATTGCTTTATTCTaGCTGAAGGAGGGGATTTTACTTTCGGTGAGCACTGAAGCCTGC +
Preference number: 2 (lower is better)
Translates to: CLCYLVEPKVYIALF*LKEGILLSVSTEAC
Trigger: GCAGGCTTCAGTGCTCACCGAAAGTAAAATCCCCTCCTTCAGCAAGAATAAAGCAATATACACCTTAGGTTCCACTAAGTAACATAGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR TCA 90 bp GTGTATTTTGTTGTTACTGAACTAGCCTATACAGAACCGTCTGTGTCCTCCCAAACTTCTGAATGGGACTaGAGTGTATCTCTGCAGGTA +
Preference number: 2 (lower is better)
Translates to: VYFVVTELAYTEPSVSSQTSEWD*SVSLQV
Trigger: TACCTGCAGAGATACACTTCAGTCCCATTCAGAAGT...TTGGGAGGACACAGACGGTTCTGTATAGGCTAGTTCAGTAACAACAAAATACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR TCA 90 bp AGGGGAAGGGCTGTTAAAAACACAAGTATTCTTGTGAAATACTTCGATCTGAGCCGCAGCAAACTCATCTaGGAATCACAGTACTCAGAC +
Preference number: 2 (lower is better)
Translates to: RGRAVKNTSILVKYFDLSRSKLI*ESQYSD
Trigger: GTCTGAGTACTGTGATTCTCAGATGAGTTTGCTGCG...GCTCAGATCGAAGTATTTCACAAGAATACTTGTGTTTTTAACAGCCCTTCCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR TCA 90 bp ATCTACAGGATAAGAAATGGCTTCATCTCCTCATCCATACAAGGTGAGAGCAAACGCAGCAAACTCATCTaGGAATCACAGTACTCAGAC +
Preference number: 2 (lower is better)
Translates to: IYRIRNGFISSSIQGESKRSKLI*ESQYSD
Trigger: GTCTGAGTACTGTGATTCTCAGATGAGTTTGCTGCG...TTTGCTCTCACCTTGTATGGATGAGGAGATGAAGCCATTTCTTATCCTGTAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR TCA 90 bp ACGGTGAAACAGACACAGTTATATACAACAGGGCAGGTTTTTAAAAAGAGTTGCGCCCGCATGAGTGAATaGTCTGCTAAGTTGAGGAAG +
Preference number: 2 (lower is better)
Translates to: TVKQTQLYTTGQVFKKSCARMSE*SAKLRK
Trigger: CTTCCTCAACTTAGCAGATCATTCACTCATGCGGGC...GCAACTCTTTTTAAAAACCTGCCCTGTTGTATATAACTGTGTCTGTTTCACCGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR GCA 90 bp AAAGGAAACCAAAAGCAAAGTCCCTGTGGTCACCCTTATTTATTGCTGAAGCAGGGGGGAAACGTTCCCTaGTTATGCCTATGTTACTTA +
Preference number: 2 (lower is better)
Translates to: KGNQKQSPCGHPYLLLKQGGNVP*LCLCYL
Trigger: TAAGTAACATAGGCATAAGCAGGGAACGTTTCCCCC...CTGCTTCAGCAATAAATAAGGGTGACCACAGGGACTTTGCTTTTGGTTTCCTTT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR GCA 90 bp GCTTGTTCCATGCTGAATGAAGCCACCCAACTTTCTAAACAACGTGCTACTGCCTATAACAGAAATCACTaGAATTCAGGGAAGTTTGGG +
Preference number: 2 (lower is better)
Translates to: ACSMLNEATQLSKQRATAYNRNH*NSGKFG
Trigger: CCCAAACTTCCCTGAATTGCAGTGATTTCTGTTATA...GGCAGTAGCACGTTGTTTAGAAAGTTGGGTGGCTTCATTCAGCATGGAACAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR GCA 90 bp CCTCTACTACAGTCCAGTAGTCTACACTTGCAGAGGCTGAATGCTTCAGCTTTCTATAACAGAAATCACTaGAATTCAGGGAAGTTTGGG +
Preference number: 2 (lower is better)
Translates to: PLLQSSSLHLQRLNASAFYNRNH*NSGKFG
Trigger: CCCAAACTTCCCTGAATTGCAGTGATTTCTGTTATA...GAAAGCTGAAGCATTCAGCCTCTGCAAGTGTAGACTACTGGACTGTAGTAGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR CCA 90 bp CAAAGGAGTAACCCTCGGGCAAATCGTGGCCCCTTTAAACGTTTATATCAAGTTTGGATTCATCAGTCATaGTTTGATCGTCTCCATTCG +
Preference number: 2 (lower is better)
Translates to: QRSNPRANRGPFKRLYQVWIHQS*FDRLHS
Trigger: CGAATGGAGACGATCAAACCATGACTGATGAATCCA...AACTTGATATAAACGTTTAAAGGGGCCACGATTTGCCCGAGGGTTACTCCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp CCTGCTACAACAGCAAACTCCAATAAACTCAAGTTGAATGGTTTCCCACTGCAAGAGATGTTCACAGAGTaGATTGATGTAGCTCAGGTC +
Preference number: 2 (lower is better)
Translates to: PATTANSNKLKLNGFPLQEMFTE*IDVAQV
Trigger: GACCTGAGCTACATCAATCCACTCTGTGAACATCTC...TTGCAGTGGGAAACCATTCAACTTGAGTTTATTGGAGTTTGCTGTTGTAGCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp ATCTACAGGATAAGAAATGGCTTCATCTCCTCATCCATACAAGGTGAGAGCAAAAGAAACCCGCAGGTCTaGGACTGTAATGCTGCTTTA +
Preference number: 2 (lower is better)
Translates to: IYRIRNGFISSSIQGESKRNPQV*DCNAAL
Trigger: TAAAGCAGCATTACAGTCCCAGACCTGCGGGTTTCT...TTTGCTCTCACCTTGTATGGATGAGGAGATGAAGCCATTTCTTATCCTGTAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp GAAATTGGTCTGAGTGAGGCCAGTGAAAACTCCTTACAACAAATCCCAGGAAAACAATTCAGGGAAGTTTaGGGTGAAGATGCGAGTGAA +
Preference number: 2 (lower is better)
Translates to: EIGLSEASENSLQQIPGKQFREV*GEDASE
Trigger: TTCACTCGCATCTTCACCCCAAACTTCCCTGAATTG...TTTTCCTGGGATTTGTTGTAAGGAGTTTTCACTGGCCTCACTCAGACCAATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR CCA 90 bp GGATTTGATGCTACAACTGAATGCAACAGGTCACATTCAGTGCTTTTTGAAGCATGGGGTTGCTGTAAATaGAGTTTCACTGCAGCTGGT +
Preference number: 2 (lower is better)
Translates to: GFDATTECNRSHSVLFEAWGCCK*SFTAAG
Trigger: ACCAGCTGCAGTGAAACTCCATTTACAGCAACCCCA...TGCTTCAAAAAGCACTGAATGTGACCTGTTGCATTCAGTTGTAGCATCAAATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR TCA 90 bp CAAAGGAGTAACCCTCGGGCAAATCGTGGCCCCTTTAAACGTTTATATCAAGTTCTTTTAGTCAGTCACTaGACTTATTGCAGAATGAGG +
Preference number: 2 (lower is better)
Translates to: QRSNPRANRGPFKRLYQVLLVSH*TYCRMR
Trigger: CCTCATTCTGCAATAAGTTCAGTGACTGACTAAAAG...AACTTGATATAAACGTTTAAAGGGGCCACGATTTGCCCGAGGGTTACTCCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR TCA 90 bp AGGGGAAGGGCTGTTAAAAACACAAGTATTCTTGTGAAATACTTCGATCTGAGCACTTCTGAATGGGACTaGAGTGTATCTCTGCAGGTA +
Preference number: 2 (lower is better)
Translates to: RGRAVKNTSILVKYFDLSTSEWD*SVSLQV
Trigger: TACCTGCAGAGATACACTTCAGTCCCATTCAGAAGT...GCTCAGATCGAAGTATTTCACAAGAATACTTGTGTTTTTAACAGCCCTTCCCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR TCA 90 bp CAAAGGAGTAACCCTCGGGCAAATCGTGGCCCCTTTAAACGTTTATATCAAGTTAGTAAGATCTCTCTTTaGGGGAAGACAAAACAGTGT +
Preference number: 2 (lower is better)
Translates to: QRSNPRANRGPFKRLYQVSKISL*GKTKQC
Trigger: ACACTGTTTTGTCTTCCCTCAAAGAGAGATCTTACT...AACTTGATATAAACGTTTAAAGGGGCCACGATTTGCCCGAGGGTTACTCCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR TCA 90 bp ACGGTGAAACAGACACAGTTATATACAACAGGGCAGGTTTTTAAAAAGAGTTGCTTGCTTGTGCCCGCATaGGTGAATGATCTGCTAAGT +
Preference number: 2 (lower is better)
Translates to: TVKQTQLYTTGQVFKKSCLLVPA*VNDLLS
Trigger: ACTTAGCAGATCATTCACTCATGCGGGCACAAGCAA...GCAACTCTTTTTAAAAACCTGCCCTGTTGTATATAACTGTGTCTGTTTCACCGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR GCA 90 bp ATCTACAGGATAAGAAATGGCTTCATCTCCTCATCCATACAAGGTGAGAGCAAAGGGGGAAACGTTCCCTaGTTATGCCTATGTTACTTA +
Preference number: 2 (lower is better)
Translates to: IYRIRNGFISSSIQGESKGGNVP*LCLCYL
Trigger: TAAGTAACATAGGCATAAGCAGGGAACGTTTCCCCC...TTTGCTCTCACCTTGTATGGATGAGGAGATGAAGCCATTTCTTATCCTGTAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp AGGGGAAGGGCTGTTAAAAACACAAGTATTCTTGTGAAATACTTCGATCTGAGCGAGATGTTCACAGAGTaGATTGATGTAGCTCAGGTC +
Preference number: 2 (lower is better)
Translates to: RGRAVKNTSILVKYFDLSEMFTE*IDVAQV
Trigger: GACCTGAGCTACATCAATCCACTCTGTGAACATCTC...GCTCAGATCGAAGTATTTCACAAGAATACTTGTGTTTTTAACAGCCCTTCCCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp TTTGTTGTTACTGAACTAGCCTATACAGAACCGTCTGTGTCCTCCCAAAACGCATCTTATTCACGTAGCTaGAAAGGACATTCTAGCATG +
Preference number: 2 (lower is better)
Translates to: FVVTELAYTEPSVSSQNASYSRS*KGHSSM
Trigger: CATGCTAGAATGTCCTTTCCAGCTACGTGAATAAGA...TGCGTTTTGGGAGGACACAGACGGTTCTGTATAGGCTAGTTCAGTAACAACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp CCATTAGCTTGTTCCATGCTGAATGAAGCCACCCAACTTTCTAAACAACGTGCTCTCCACAAAGTACAATaGGAAATATCAGGAACACTC +
Preference number: 2 (lower is better)
Translates to: PLACSMLNEATQLSKQRALHKVQ*EISGTL
Trigger: GAGTGTTCCTGATATTTCCCATTGTACTTTGTGGAG...AGCACGTTGTTTAGAAAGTTGGGTGGCTTCATTCAGCATGGAACAAGCTAATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR TCA 90 bp CAAAGGAGTAACCCTCGGGCAAATCGTGGCCCCTTTAAACGTTTATATCAAGTTGTATTTTGTTGTTACTaGACTAGCCTATACAGAACC +
Preference number: 2 (lower is better)
Translates to: QRSNPRANRGPFKRLYQVVFCCY*TSLYRT
Trigger: GGTTCTGTATAGGCTAGTTCAGTAACAACAAAATAC...AACTTGATATAAACGTTTAAAGGGGCCACGATTTGCCCGAGGGTTACTCCTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR TCA 90 bp ATCTACAGGATAAGAAATGGCTTCATCTCCTCATCCATACAAGGTGAGAGCAAAACCCTTATTTATTGCTaGAGCAGAACGAAAACCTGC +
Preference number: 2 (lower is better)
Translates to: IYRIRNGFISSSIQGESKTLIYC*SRTKTC
Trigger: GCAGGTTTTCGTTCTGCTTCAGCAATAAATAAGGGT...TTTGCTCTCACCTTGTATGGATGAGGAGATGAAGCCATTTCTTATCCTGTAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR GCA 90 bp ATAGTCAGTCATTCGAATGTATACTCGCATCGGCAGTTAAGCCTCCACAAAGTACTAAGAAAAGCAGGCTaGGATACAACAAGCATTTGT +
Preference number: 2 (lower is better)
Translates to: IVSHSNVYSHRQLSLHKVLRKAG*DTTSIC
Trigger: ACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAG...TACTTTGTGGAGGCTTAACTGCCGATGCGAGTATACATTCGAATGACTGACTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR CCA 90 bp ATCTACAGGATAAGAAATGGCTTCATCTCCTCATCCATACAAGGTGAGAGCAAATCAATCCCTCCTGTCTaGATTCATCAGTCATGGTTT +
Preference number: 2 (lower is better)
Translates to: IYRIRNGFISSSIQGESKSIPPV*IHQSWF
Trigger: AAACCATGACTGATGAATCCAGACAGGAGGGATTGA...TTTGCTCTCACCTTGTATGGATGAGGAGATGAAGCCATTTCTTATCCTGTAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp ACGGTGAAACAGACACAGTTATATACAACAGGGCAGGTTTTTAAAAAGAGTTGCAGCCGAGGAAGATACTaGATCCACAGAAAGAAAAGG +
Preference number: 2 (lower is better)
Translates to: TVKQTQLYTTGQVFKKSCSRGRY*IHRKKR
Trigger: CCTTTTCTTTCTGTGGATCCAGTATCTTCCTCGGCT...GCAACTCTTTTTAAAAACCTGCCCTGTTGTATATAACTGTGTCTGTTTCACCGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp TTGATGCTACAACTGAATGCAACAGGTCACATTCAGTGCTTTTTGAAGCAGAAATCTCCTCCATGGTTCTaGCACTTAGATCACAAACCT +
Preference number: 2 (lower is better)
Translates to: LMLQLNATGHIQCFLKQKSPPWF*HLDHKP
Trigger: AGGTTTGTGATCTAAGTGCCAGAACCATGGAGGAGA...TTTCTGCTTCAAAAAGCACTGAATGTGACCTGTTGCATTCAGTTGTAGCATCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR TCA 90 bp AAAGGAAACCAAAAGCAAAGTCCCTGTGGTCACCCTTATTTATTGCTGAAGCAGGTATTTTGTTGTTACTaGACTAGCCTATACAGAACC +
Preference number: 2 (lower is better)
Translates to: KGNQKQSPCGHPYLLLKQVFCCY*TSLYRT
Trigger: GGTTCTGTATAGGCTAGTTCAGTAACAACAAAATAC...CTGCTTCAGCAATAAATAAGGGTGACCACAGGGACTTTGCTTTTGGTTTCCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR TCA 90 bp CCTGCTACAACAGCAAACTCCAATAAACTCAAGTTGAATGGTTTCCCACTGCAAGTATTTTGTTGTTACTaGACTAGCCTATACAGAACC +
Preference number: 2 (lower is better)
Translates to: PATTANSNKLKLNGFPLQVFCCY*TSLYRT
Trigger: GGTTCTGTATAGGCTAGTTCAGTAACAACAAAATAC...TTGCAGTGGGAAACCATTCAACTTGAGTTTATTGGAGTTTGCTGTTGTAGCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR TCA 90 bp ATCTACAGGATAAGAAATGGCTTCATCTCCTCATCCATACAAGGTGAGAGCAAACCAATAAACTCAAGTTaGATGGTTTCCCACTGCAAT +
Preference number: 2 (lower is better)
Translates to: IYRIRNGFISSSIQGESKPINSS*MVSHCN
Trigger: ATTGCAGTGGGAAACCATTCAACTTGAGTTTATTGG...TTTGCTCTCACCTTGTATGGATGAGGAGATGAAGCCATTTCTTATCCTGTAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR TCA 90 bp ACGGTGAAACAGACACAGTTATATACAACAGGGCAGGTTTTTAAAAAGAGTTGCGACAAGAGTTGTTCCTaGGTTAAAACCTGCTACAAC +
Preference number: 2 (lower is better)
Translates to: TVKQTQLYTTGQVFKKSCDKSCS*VKTCYN
Trigger: GTTGTAGCAGGTTTTAACTCAGGAACAACTCTTGTC...GCAACTCTTTTTAAAAACCTGCCCTGTTGTATATAACTGTGTCTGTTTCACCGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR GCA 90 bp GGATTTGATGCTACAACTGAATGCAACAGGTCACATTCAGTGCTTTTTGAAGCACTAAGAAAAGCAGGCTaGGATACAACAAGCATTTGT +
Preference number: 2 (lower is better)
Translates to: GFDATTECNRSHSVLFEALRKAG*DTTSIC
Trigger: ACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAG...TGCTTCAAAAAGCACTGAATGTGACCTGTTGCATTCAGTTGTAGCATCAAATCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR CCA 90 bp GAAATTGGTCTGAGTGAGGCCAGTGAAAACTCCTTACAACAAATCCCAGGAAAATGTGGTTTTATACTATaGGGTTGCTGTAAATGGAGT +
Preference number: 2 (lower is better)
Translates to: EIGLSEASENSLQQIPGKCGFIL*GCCKWS
Trigger: ACTCCATTTACAGCAACCCCATAGTATAAAACCACA...TTTTCCTGGGATTTGTTGTAAGGAGTTTTCACTGGCCTCACTCAGACCAATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR TCA 90 bp ATCTACAGGATAAGAAATGGCTTCATCTCCTCATCCATACAAGGTGAGAGCAAATTGCTTTATTCTTGCTaGAGGAGGGGATTTTACTTT +
Preference number: 2 (lower is better)
Translates to: IYRIRNGFISSSIQGESKLLYSC*RRGFYF
Trigger: AAAGTAAAATCCCCTCCTTCAGCAAGAATAAAGCAA...TTTGCTCTCACCTTGTATGGATGAGGAGATGAAGCCATTTCTTATCCTGTAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR GCA 90 bp GGATTTGATGCTACAACTGAATGCAACAGGTCACATTCAGTGCTTTTTGAAGCATATAACAGAAATCACTaGAATTCAGGGAAGTTTGGG +
Preference number: 2 (lower is better)
Translates to: GFDATTECNRSHSVLFEAYNRNH*NSGKFG
Trigger: CCCAAACTTCCCTGAATTGCAGTGATTTCTGTTATA...TGCTTCAAAAAGCACTGAATGTGACCTGTTGCATTCAGTTGTAGCATCAAATCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR CCA 90 bp AAAACAGTGTATTTTGTTGTTACTGAACTAGCCTATACAGAACCGTCTGTGTCCTCTTATTCACGTAGCTaGAAAGGACATTCTAGCATG +
Preference number: 2 (lower is better)
Translates to: KTVYFVVTELAYTEPSVSSYSRS*KGHSSM
Trigger: CATGCTAGAATGTCCTTTCCAGCTACGTGAATAAGA...GGACACAGACGGTTCTGTATAGGCTAGTTCAGTAACAACAAAATACACTGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CCA 90 bp GGATTTGATGCTACAACTGAATGCAACAGGTCACATTCAGTGCTTTTTGAAGCATGTGGTTTTATACTATaGGGTTGCTGTAAATGGAGT +
Preference number: 2 (lower is better)
Translates to: GFDATTECNRSHSVLFEACGFIL*GCCKWS
Trigger: ACTCCATTTACAGCAACCCCATAGTATAAAACCACA...TGCTTCAAAAAGCACTGAATGTGACCTGTTGCATTCAGTTGTAGCATCAAATCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR GCA 90 bp GGATTTGATGCTACAACTGAATGCAACAGGTCACATTCAGTGCTTTTTGAAGCATTTATACTATGGGGTTaGTGTAAATGGAGTTTCACT +
Preference number: 2 (lower is better)
Translates to: GFDATTECNRSHSVLFEAFILWG*CKWSFT
Trigger: AGTGAAACTCCATTTACAGCAACCCCATAGTATAAA...TGCTTCAAAAAGCACTGAATGTGACCTGTTGCATTCAGTTGTAGCATCAAATCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR CAA 90 bp TTACAACAGTGTAGCATCAACATTGTAGTAGTCAACACTAGGACATaGTCTGTGACATTTAAATTAGGAGTTTCTCCACACTTGTCAACA +
Preference number: 2 (lower is better)
Translates to: LQQCSINIVVVNTRT*SVTFKLGVSPHLST
Trigger: TGTTGACAAGTGTGGAGAAACTCCTAATTTAAATGTCACAGACAATGTCCTAGTGTTGACTACTACAATGTTGATGCTACACTGTTGTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR GCA 72 bp GTGGTAGGCGGGCGTCAGCGGCGCGGGCTTGCTGTCTaGGTGCTTGCTGGACGGAGTGACCGGGTGGGAGGG +
Preference number: 3 (lower is better)
Translates to: VVGGRQRRGLAV*VLAGRSDRVGG
Trigger: CCCTCCCACCCGGTCACTCCGTCCAGCAAGCACGCAGACAGCAAGCCCGCGCCGCTGACGCCCGCCTACCAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469877.5
3UTR GCA 72 bp GGGGGTGCTGCCACAGCACGGTGGAGGCCCTGGTGCTaGGGAACGAACCAGGCATCCACCAGGCTTCTGCTT +
Preference number: 3 (lower is better)
Translates to: GGAATARWRPWC*GTNQASTRLLL
Trigger: AAGCAGAAGCCTGGTGGATGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCACCGTGCTGTGGCAGCACCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CAA 90 bp GTGGGAGGGGTGGGGCAGCGTGTGGTAGGCGGGCGTCAGCGGCGCGGGCTTGCTTGCAGATCCTGCTGGTaGTTGCACGACACTAATATC +
Preference number: 3 (lower is better)
Translates to: VGGVGQRVVGGRQRRGLACRSCW*LHDTNI
Trigger: GATATTAGTGTCGTGCAACAACCAGCAGGATCTGCA...AGCAAGCCCGCGCCGCTGACGCCCGCCTACCACACGCTGCCCCACCCCTCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469877.5
3UTR-3UTR CAA 90 bp CGTGTGGTAGGCGGGCGTCAGCGGCGCGGGCTTGCTGTCTGCGTGCTTGCTGGAAGATCCTGCTGGTTGTaGCACGACACTAATATCCGC +
Preference number: 3 (lower is better)
Translates to: RVVGGRQRRGLAVCVLAGRSCWL*HDTNIR
Trigger: GCGGATATTAGTGTCGTGCAACAACCAGCAGGATCT...TCCAGCAAGCACGCAGACAGCAAGCCCGCGCCGCTGACGCCCGCCTACCACACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469877.5
3UTR TCA 72 bp ATGGGGCAGGTCCACGCTGAGCCCAGGCAGACAACGTaGCCAGTCACGGAAGGAAGCCAAAGGGGCTTGCTG +
Preference number: 3 (lower is better)
Translates to: MGQVHAEPRQTT*PVTEGSQRGLL
Trigger: CAGCAAGCCCCTTTGGCTTCCTTCCGTGACTGGTCACGTTGTCTGCCTGGGCTCAGCGTGGACCTGCCCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR GCA 72 bp CCAGCGAGCCGCGGTGAGGACAGGCTTCGTCTCCTCTaGACTGGAACACAGTGGGGGAAACGTTCCCTGCTT +
Preference number: 3 (lower is better)
Translates to: PASRGEDRLRLL*TGTQWGKRSLL
Trigger: AAGCAGGGAACGTTTCCCCCACTGTGTTCCAGTGCAGAGGAGACGAAGCCTGTCCTCACCGCGGCTCGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR CCA 72 bp ACAACGCAGCACACAGAAGAGCACAGAGCCGTGAGGTaGAGACAAGCTCTGAACACACGTGACGCCCGCCCG +
Preference number: 3 (lower is better)
Translates to: TTQHTEEHRAVR*RQALNTRDARP
Trigger: CGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGCTCTGTGCTCTTCTGTGTGCTGCGTTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR GCA 72 bp GCAATTCTAGTGAAAAGTCCAGGTGAGGCCAGGTTCTaGAGCATGGGGCAGGTCCACGCTGAGCCCAGGCAG +
Preference number: 3 (lower is better)
Translates to: AILVKSPGEARF*SMGQVHAEPRQ
Trigger: CTGCCTGGGCTCAGCGTGGACCTGCCCCATGCTGCAGAACCTGGCCTCACCTGGACTTTTCACTAGAATTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CAA 90 bp CTGGGGACTCGGACAGCAACGCTACCGGCTCCGAGAGGACAGTTAATGTCGCCTCCGTATGGGCCTTCCTaGAGGTCAAGACTGAGTCTG +
Preference number: 3 (lower is better)
Translates to: LGTRTATLPAPRGQLMSPPYGPS*RSRLSL
Trigger: CAGACTCAGTCTTGACCTCAAGGAAGGCCCATACGG...AGGCGACATTAACTGTCCTCTCGGAGCCGGTAGCGTTGCTGTCCGAGTCCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR TCA 72 bp ACTGGATCCACAGAAAGAAAAGGCAATGCCGTAACATaGGGCCCTCATGGCCGCACCGTCCAGGGGAAGGGC +
Preference number: 3 (lower is better)
Translates to: TGSTERKGNAVT*GPHGRTVQGKG
Trigger: GCCCTTCCCCTGGACGGTGCGGCCATGAGGGCCTCATGTTACGGCATTGCCTTTTCTTTCTGTGGATCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CAA 90 bp AACGAAAACCTGCTCCACGGGCCGGGCTTCCTGCCCAGGACCGCACAGGCTTTCTTCATCAGTCATGGTTaGATCGTCTCCATTCGCAGA +
Preference number: 3 (lower is better)
Translates to: NENLLHGPGFLPRTAQAFFISHG*IVSIRR
Trigger: TCTGCGAATGGAGACGATCAAACCATGACTGATGAA...GAAAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGTGGAGCAGGTTTTCGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR GCA 72 bp AAGGAGGGGATTTTACTTTCGGTGAGCACTGAAGCCTaGTGGCTACGGCCAATGGTGGAGGAGACCTCGGGA +
Preference number: 3 (lower is better)
Translates to: KEGILLSVSTEA*WLRPMVEETSG
Trigger: TCCCGAGGTCTCCTCCACCATTGGCCGTAGCCAGCAGGCTTCAGTGCTCACCGAAAGTAAAATCCCCTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR CCA 72 bp GAGCAAACACCTCTAGGTGGATGCGGCAGTGCCGTATaGGCCTTCCTTGAGGTCAAGACTGAGTCTGTCAGC +
Preference number: 3 (lower is better)
Translates to: EQTPLGGCGSAV*AFLEVKTESVS
Trigger: GCTGACAGACTCAGTCTTGACCTCAAGGAAGGCCCATACGGCACTGCCGCATCCACCTAGAGGTGTTTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR CCA 72 bp GGCTCTTCCAGACAACATAAGTATGGATGTCAGGGGTaGGGAGCCGGGGGAACTGAAGCCACAGCACTTGAC +
Preference number: 3 (lower is better)
Translates to: GSSRQHKYGCQG*GAGGTEATALD
Trigger: GTCAAGTGCTGTGGCTTCAGTTCCCCCGGCTCCCCACCCCTGACATCCATACTTATGTTGTCTGGAAGAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR TCA 72 bp CTTGCTGAAGGAGGGGATTTTACTTTCGGTGAGCACTaGAGCCTGCTGGCTACGGCCAATGGTGGAGGAGAC +
Preference number: 3 (lower is better)
Translates to: LAEGGDFTFGEH*SLLATANGGGD
Trigger: GTCTCCTCCACCATTGGCCGTAGCCAGCAGGCTTCAGTGCTCACCGAAAGTAAAATCCCCTCCTTCAGCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR TCA 72 bp CCCCTTACGAAGAGCACCCTCGGATGTAGGCTCACGTaGACACACCACCTCCCTCCAATAGTCAGTCATTCG +
Preference number: 3 (lower is better)
Translates to: PLTKSTLGCRLT*THHLPPIVSHS
Trigger: CGAATGACTGACTATTGGAGGGAGGTGGTGTGTTCACGTGAGCCTACATCCGAGGGTGCTCTTCGTAAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR GCA 72 bp GAACCAGGCATCCACCAGGCTTCTGCTTCCGGTGGATaGGGGCATGGGACTTCTTATTCACGTAGCTGGAAA +
Preference number: 3 (lower is better)
Translates to: EPGIHQASASGG*GHGTSYSRSWK
Trigger: TTTCCAGCTACGTGAATAAGAAGTCCCATGCCCGCATCCACCGGAAGCAGAAGCCTGGTGGATGCCTGGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR GCA 72 bp GCAGAAGCAGCTTCCCACCCAAGCACCTCTGAACTGTaGGTGAGGAGGCACAATTCAGGGTTGTTTCTCGAG +
Preference number: 3 (lower is better)
Translates to: AEAASHPSTSEL*VRRHNSGLFLE
Trigger: CTCGAGAAACAACCCTGAATTGTGCCTCCTCACGCACAGTTCAGAGGTGCTTGGGTGGGAAGCTGCTTCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544132.2
3UTR CCA 72 bp CGTGACCAGTCACGGAAGGAAGCCAAAGGGGCTTGCTaGGCACCAGAGACTGTAATTAGCAAGGGCAAGGAA +
Preference number: 3 (lower is better)
Translates to: RDQSRKEAKGAC*APETVISKGKE
Trigger: TTCCTTGCCCTTGCTAATTACAGTCTCTGGTGCCCAGCAAGCCCCTTTGGCTTCCTTCCGTGACTGGTCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CAA 90 bp CTGGGGACTCGGACAGCAACGCTACCGGCTCCGAGAGGACAGTTAATGTCGCCTTTCATCAGTCATGGTTaGATCGTCTCCATTCGCAGA +
Preference number: 3 (lower is better)
Translates to: LGTRTATLPAPRGQLMSPFISHG*IVSIRR
Trigger: TCTGCGAATGGAGACGATCAAACCATGACTGATGAA...AGGCGACATTAACTGTCCTCTCGGAGCCGGTAGCGTTGCTGTCCGAGTCCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CAA 90 bp AGAGCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGTCTCTCCACAACTACTaGATCAGTGTTCATAGCACT +
Preference number: 3 (lower is better)
Translates to: RAVRWRQALNTRDARPSVSLHNY*ISVHST
Trigger: AGTGCTATGAACACTGATCAAGTAGTTGTGGAGAGA...CACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR CAA 90 bp CTAGGGCCACACGGAGCAGAAGCAGCTTCCCACCCAAGCACCTCTGAACTGTGCAGGCACAATTCAGGGTaGTTTCTCGAGAACACTCAT +
Preference number: 3 (lower is better)
Translates to: LGPHGAEAASHPSTSELCRHNSG*FLENTH
Trigger: ATGAGTGTTCTCGAGAAACAACCCTGAATTGTGCCT...GCACAGTTCAGAGGTGCTTGGGTGGGAAGCTGCTTCTGCTCCGTGTGGCCCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544132.2
3UTR TCA 72 bp GCAACTGTGTTTGAGTGTTGTGGTCTACACAGCCCATaGCACAGGCAACCCACGCCTACGAGAAGGCAAAGG +
Preference number: 3 (lower is better)
Translates to: ATVFECCGLHSP*HRQPTPTRRQR
Trigger: CCTTTGCCTTCTCGTAGGCGTGGGTTGCCTGTGTCATGGGCTGTGTAGACCACAACACTCAAACACAGTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR GCA 72 bp GATGCGAGTGAACATCTGAGCCATGACAGTAAGCTCTaGCTTTGGAAAGGAGAGCTCCCACTTCACGGCCAC +
Preference number: 3 (lower is better)
Translates to: DASEHLSHDSKL*LWKGELPLHGH
Trigger: GTGGCCGTGAAGTGGGAGCTCTCCTTTCCAAAGGCAGAGCTTACTGTCATGGCTCAGATGTTCACTCGCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR GCA 72 bp GGTGCTCCACCCATTCCTGCAGATCCTGCTGGTTGTTaGACGACACTAATATCCGCTCAATCATGCTCCCTG +
Preference number: 3 (lower is better)
Translates to: GAPPIPADPAGC*TTLISAQSCSL
Trigger: CAGGGAGCATGATTGAGCGGATATTAGTGTCGTGCAACAACCAGCAGGATCTGCAGGAATGGGTGGAGCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469877.5
3UTR CCA 72 bp GGTGGATGCGGGCATGGGACTTCTTATTCACGTAGCTaGAAAGGACATTCTAGCATGGGGATTAGCCCGGAC +
Preference number: 3 (lower is better)
Translates to: GGCGHGTSYSRS*KGHSSMGISPD
Trigger: GTCCGGGCTAATCCCCATGCTAGAATGTCCTTTCCAGCTACGTGAATAAGAAGTCCCATGCCCGCATCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR CCA 72 bp GATCAGAACACTGAATACGTGGGTTTGGCGAAGGAGTaGGCAGTGGGGAAGAAAGAAATCACGGCCACCTGG +
Preference number: 3 (lower is better)
Translates to: DQNTEYVGLAKE*AVGKKEITATW
Trigger: CCAGGTGGCCGTGATTTCTTTCTTCCCCACTGCCCACTCCTTCGCCAAACCCACGTATTCAGTGTTCTGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR CAA 90 bp AGAACCGTAAACAGCAACACAACACTCTCCCAAGGTGCCCAGCTCAAAGGCATCCCGTATGGGCCTTCCTaGAGGTCAAGACTGAGTCTG +
Preference number: 3 (lower is better)
Translates to: RTVNSNTTLSQGAQLKGIPYGPS*RSRLSL
Trigger: CAGACTCAGTCTTGACCTCAAGGAAGGCCCATACGG...GATGCCTTTGAGCTGGGCACCTTGGGAGAGTGTTGTGTTGCTGTTTACGGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR TCA 72 bp CTTGTGAGCAGCAGGACCCGGCTCCCAGGACAAGACTaGTACTGCATCAGAGTTCACTCTGCACAAACAAGA +
Preference number: 3 (lower is better)
Translates to: LVSSRTRLPGQD*YCIRVHSAQTR
Trigger: TCTTGTTTGTGCAGAGTGAACTCTGATGCAGTATCAGTCTTGTCCTGGGAGCCGGGTCCTGCTGCTCACAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR TCA 72 bp AAGCAGCTTCCCACCCAAGCACCTCTGAACTGTGCGTaGGGAGGCACAATTCAGGGTTGTTTCTCGAGAACA +
Preference number: 3 (lower is better)
Translates to: KQLPTQAPLNCA*GGTIQGCFSRT
Trigger: TGTTCTCGAGAAACAACCCTGAATTGTGCCTCCTCACGCACAGTTCAGAGGTGCTTGGGTGGGAAGCTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544132.2
3UTR GCA 72 bp TTTCCCACAGACGTGACCTTCGTTTGCTTCTGTAGGTaGTCCACCCATTCCTGCAGATCCTGCTGGTTGTTG +
Preference number: 3 (lower is better)
Translates to: FPTDVTFVCFCR*STHSCRSCWLL
Trigger: CAACAACCAGCAGGATCTGCAGGAATGGGTGGAGCACCTACAGAAGCAAACGAAGGTCACGTCTGTGGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469877.5
3UTR CCA 72 bp GAGGACAGGCTTCGTCTCCTCTGCACTGGAACACAGTaGGGGAAACGTTCCCTGCTTATGCCTATGTTACTT +
Preference number: 3 (lower is better)
Translates to: EDRLRLLCTGTQ*GKRSLLMPMLL
Trigger: AAGTAACATAGGCATAAGCAGGGAACGTTTCCCCCACTGTGTTCCAGTGCAGAGGAGACGAAGCCTGTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR CCA 72 bp AGTGAACATCTGAGCCATGACAGTAAGCTCTGCCTTTaGAAAGGAGAGCTCCCACTTCACGGCCACAACGCA +
Preference number: 3 (lower is better)
Translates to: SEHLSHDSKLCL*KGELPLHGHNA
Trigger: TGCGTTGTGGCCGTGAAGTGGGAGCTCTCCTTTCCAAAGGCAGAGCTTACTGTCATGGCTCAGATGTTCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR CAA 90 bp CTGGGGACTCGGACAGCAACGCTACCGGCTCCGAGAGGACAGTTAATGTCGCCTTCCAATAAACTCAAGTaGAATGGTTTCCCACTGCAA +
Preference number: 3 (lower is better)
Translates to: LGTRTATLPAPRGQLMSPSNKLK*NGFPLQ
Trigger: TTGCAGTGGGAAACCATTCAACTTGAGTTTATTGGA...AGGCGACATTAACTGTCCTCTCGGAGCCGGTAGCGTTGCTGTCCGAGTCCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CAA 90 bp ACCTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCTCTCTCCACAACTACTaGATCAGTGTTCATAGCACT +
Preference number: 3 (lower is better)
Translates to: TCQGPEPTCCSARLPEHSSLHNY*ISVHST
Trigger: AGTGCTATGAACACTGATCAAGTAGTTGTGGAGAGA...GCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR CAA 90 bp AAAGTAGAAACAATGGCCCTCTGGATGCCACATCGCCACTGCCACAGGAGAACTGGGACAGAACACAATTaGGCCCCTCAAGCAATGACT +
Preference number: 3 (lower is better)
Translates to: KVETMALWMPHRHCHRRTGTEHN*APQAMT
Trigger: AGTCATTGCTTGAGGGGCCAAATTGTGTTCTGTCCC...AGTTCTCCTGTGGCAGTGGCGATGTGGCATCCAGAGGGCCATTGTTTCTACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR TCA 72 bp AAAAGCAAAGTCCCTGTGGTCACCCTTATTTATTGCTaGAGCAGAACGAAAACCTGCTCCACGGGCCGGGCT +
Preference number: 3 (lower is better)
Translates to: KSKVPVVTLIYC*SRTKTCSTGRA
Trigger: AGCCCGGCCCGTGGAGCAGGTTTTCGTTCTGCTTCAGCAATAAATAAGGGTGACCACAGGGACTTTGCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR TCA 72 bp CTGAATGAGGCTTTATGGTGGGGTTTCCCACAGACGTaGCCTTCGTTTGCTTCTGTAGGTGCTCCACCCATT +
Preference number: 3 (lower is better)
Translates to: LNEALWWGFPQT*PSFASVGAPPI
Trigger: AATGGGTGGAGCACCTACAGAAGCAAACGAAGGTCACGTCTGTGGGAAACCCCACCATAAAGCCTCATTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469877.5
3UTR GCA 72 bp TGCTTCTGTAGGTGCTCCACCCATTCCTGCAGATCCTaGTGGTTGTTGCACGACACTAATATCCGCTCAATC +
Preference number: 3 (lower is better)
Translates to: CFCRCSTHSCRS*WLLHDTNIRSI
Trigger: GATTGAGCGGATATTAGTGTCGTGCAACAACCAGCAGGATCTGCAGGAATGGGTGGAGCACCTACAGAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469877.5
3UTR CCA 72 bp ACACTGAATACGTGGGTTTGGCGAAGGAGTGGGCAGTaGGGAAGAAAGAAATCACGGCCACCTGGAATTACA +
Preference number: 3 (lower is better)
Translates to: TLNTWVWRRSGQ*GRKKSRPPGIT
Trigger: TGTAATTCCAGGTGGCCGTGATTTCTTTCTTCCCCACTGCCCACTCCTTCGCCAAACCCACGTATTCAGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR CAA 90 bp CTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGCGATACAACAAGCATTaGTTAAGAAAAGCTCAGAAG +
Preference number: 3 (lower is better)
Translates to: LPRPRAHMLFCTITRTQPRYNKH*LRKAQK
Trigger: CTTCTGAGCTTTTCTTAACAAATGCTTGTTGTATCG...CGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR CAA 90 bp CATCTGAGCCATGACAGTAAGCTCTGCCTTTGGAAAGGAGAGCTCCCACTTCACGGGCTCACAGCACCTTaGCTGCATATATTCTTCTCA +
Preference number: 3 (lower is better)
Translates to: HLSHDSKLCLWKGELPLHGLTAP*LHIFFS
Trigger: TGAGAAGAATATATGCAGCAAAGGTGCTGTGAGCCC...GTGAAGTGGGAGCTCTCCTTTCCAAAGGCAGAGCTTACTGTCATGGCTCAGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR CAA 90 bp AAAGTAGAAACAATGGCCCTCTGGATGCCACATCGCCACTGCCACAGGAGAACTGGGCTCACAGCACCTTaGCTGCATATATTCTTCTCA +
Preference number: 3 (lower is better)
Translates to: KVETMALWMPHRHCHRRTGLTAP*LHIFFS
Trigger: TGAGAAGAATATATGCAGCAAAGGTGCTGTGAGCCC...AGTTCTCCTGTGGCAGTGGCGATGTGGCATCCAGAGGGCCATTGTTTCTACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR CAA 90 bp AAACAATGGCCCTCTGGATGCCACATCGCCACTGCCACAGGAGAACTGTCTTTTGTGCAGCAACTGTGTTaGAGTGTTGTGGTCTACACA +
Preference number: 3 (lower is better)
Translates to: KQWPSGCHIATATGELSFVQQLC*SVVVYT
Trigger: TGTGTAGACCACAACACTCAAACACAGTTGCTGCAC...AAAAGACAGTTCTCCTGTGGCAGTGGCGATGTGGCATCCAGAGGGCCATTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR TCA 72 bp ATCAGAGTTCACTCTGCACAAACAAGATCAGAACACTaGATACGTGGGTTTGGCGAAGGAGTGGGCAGTGGG +
Preference number: 3 (lower is better)
Translates to: IRVHSAQTRSEH*IRGFGEGVGSG
Trigger: CCCACTGCCCACTCCTTCGCCAAACCCACGTATTCAGTGTTCTGATCTTGTTTGTGCAGAGTGAACTCTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR GCA 72 bp TCCTCTGCACTGGAACACAGTGGGGGAAACGTTCCCTaGTTATGCCTATGTTACTTAGTGGAACCTAAGGTG +
Preference number: 3 (lower is better)
Translates to: SSALEHSGGNVP*LCLCYLVEPKV
Trigger: CACCTTAGGTTCCACTAAGTAACATAGGCATAAGCAGGGAACGTTTCCCCCACTGTGTTCCAGTGCAGAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR GCA 72 bp ACCTTCGTTTGCTTCTGTAGGTGCTCCACCCATTCCTaGAGATCCTGCTGGTTGTTGCACGACACTAATATC +
Preference number: 3 (lower is better)
Translates to: TFVCFCRCSTHS*RSCWLLHDTNI
Trigger: GATATTAGTGTCGTGCAACAACCAGCAGGATCTGCAGGAATGGGTGGAGCACCTACAGAAGCAAACGAAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469877.5
3UTR CCA 72 bp TTCTGTAGGTGCTCCACCCATTCCTGCAGATCCTGCTaGTTGTTGCACGACACTAATATCCGCTCAATCATG +
Preference number: 3 (lower is better)
Translates to: FCRCSTHSCRSC*LLHDTNIRSIM
Trigger: CATGATTGAGCGGATATTAGTGTCGTGCAACAACCAGCAGGATCTGCAGGAATGGGTGGAGCACCTACAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469877.5
3UTR-3UTR CAA 90 bp AGGGGAAGGGCTGTTAAAAACACAAGTATTCTTGTGAAATACTTCGATCTGAGCCTGTCAGCCAGCAAGTaGCCCTCAGAAACCCGCAGG +
Preference number: 3 (lower is better)
Translates to: RGRAVKNTSILVKYFDLSLSASK*PSETRR
Trigger: CCTGCGGGTTTCTGAGGGCAACTTGCTGGCTGACAG...GCTCAGATCGAAGTATTTCACAAGAATACTTGTGTTTTTAACAGCCCTTCCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR TCA 72 bp GATAAGAAATGGCTTCATCTCCTCATCCATACAAGGTaGGAGCAAAGGAGTAACCCTCGGGCAAATCGTGGC +
Preference number: 3 (lower is better)
Translates to: DKKWLHLLIHTR*EQRSNPRANRG
Trigger: GCCACGATTTGCCCGAGGGTTACTCCTTTGCTCTCACCTTGTATGGATGAGGAGATGAAGCCATTTCTTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR TCA 72 bp ATCCTGTGTTCCGTGAGGACATTCACTGCAGAAGGGTaGTTGGCACAATACGTGAGGTACAGGGTTTTCATC +
Preference number: 3 (lower is better)
Translates to: ILCSVRTFTAEG*LAQYVRYRVFI
Trigger: GATGAAAACCCTGTACCTCACGTATTGTGCCAATCACCCTTCTGCAGTGAATGTCCTCACGGAACACAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469877.5
3UTR CCA 72 bp TGTTCTGCACGATTACCAGAACACAGCCGTTGGAACTaGGCTCACAGCACCTTTGCTGCATATATTCTTCTC +
Preference number: 3 (lower is better)
Translates to: CSARLPEHSRWN*AHSTFAAYILL
Trigger: GAGAAGAATATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR CCA 72 bp ACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTaGAACTGGGCTCACAGCACCTTTGCTGCATATATT +
Preference number: 3 (lower is better)
Translates to: TCCSARLPEHSR*NWAHSTFAAYI
Trigger: AATATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR CAA 90 bp CATCTGAGAATCACAGTACTCAGACAGCGGACAAGAGCAAACACCTCTAGGTGGTTCATCAGTCATGGTTaGATCGTCTCCATTCGCAGA +
Preference number: 3 (lower is better)
Translates to: HLRITVLRQRTRANTSRWFISHG*IVSIRR
Trigger: TCTGCGAATGGAGACGATCAAACCATGACTGATGAA...CCACCTAGAGGTGTTTGCTCTTGTCCGCTGTCTGAGTACTGTGATTCTCAGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CAA 90 bp GTGTATTTTGTTGTTACTGAACTAGCCTATACAGAACCGTCTGTGTCCTCCCAACCGTATGGGCCTTCCTaGAGGTCAAGACTGAGTCTG +
Preference number: 3 (lower is better)
Translates to: VYFVVTELAYTEPSVSSQPYGPS*RSRLSL
Trigger: CAGACTCAGTCTTGACCTCAAGGAAGGCCCATACGG...TTGGGAGGACACAGACGGTTCTGTATAGGCTAGTTCAGTAACAACAAAATACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CAA 90 bp GTGGGGAAGAAAGAAATCACGGCCACCTGGAATTACAGCCACCCTGAAGAAGGATCTCTCCACAACTACTaGATCAGTGTTCATAGCACT +
Preference number: 3 (lower is better)
Translates to: VGKKEITATWNYSHPEEGSLHNY*ISVHST
Trigger: AGTGCTATGAACACTGATCAAGTAGTTGTGGAGAGA...TCCTTCTTCAGGGTGGCTGTAATTCCAGGTGGCCGTGATTTCTTTCTTCCCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR CAA 90 bp TATCAAGTTCCCACCCCCTTGGGAGGTCACACGGTGAAACAGACACAGTTATATTTCATCAGTCATGGTTaGATCGTCTCCATTCGCAGA +
Preference number: 3 (lower is better)
Translates to: YQVPTPLGGHTVKQTQLYFISHG*IVSIRR
Trigger: TCTGCGAATGGAGACGATCAAACCATGACTGATGAA...ATATAACTGTGTCTGTTTCACCGTGTGACCTCCCAAGGGGGTGGGAACTTGATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CAA 90 bp GGACATGTAAGTGACGTTGCCCAGAGTTTTAATGTCATCGCCCTCCCAGTTCCGGGCAGCCATGGATTTTaGAATATCTTGTCTATCTGT +
Preference number: 3 (lower is better)
Translates to: GHVSDVAQSFNVIALPVPGSHGF*NILSIC
Trigger: ACAGATAGACAAGATATTCAAAAATCCATGGCTGCC...CGGAACTGGGAGGGCGATGACATTAAAACTCTGGGCAACGTCACTTACATGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469877.5
3UTR TCA 72 bp TATATCAAGTTCCCACCCCCTTGGGAGGTCACACGGTaGAACAGACACAGTTATATACAACAGGGCAGGTTT +
Preference number: 3 (lower is better)
Translates to: YIKFPPPWEVTR*NRHSYIQQGRF
Trigger: AAACCTGCCCTGTTGTATATAACTGTGTCTGTTTCACCGTGTGACCTCCCAAGGGGGTGGGAACTTGATATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR TCA 72 bp AGCACAGACGCCACTGAGTGTGAAGGAACGAGCTTCTaGTGCTACATTCCAACATCGCTGAAAACTGAAAGT +
Preference number: 3 (lower is better)
Translates to: STDATECEGTSF*CYIPTSLKTES
Trigger: ACTTTCAGTTTTCAGCGATGTTGGAATGTAGCATCAGAAGCTCGTTCCTTCACACTCAGTGGCGTCTGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR TCA 72 bp GGACATTCACTGCAGAAGGGTGATTGGCACAATACGTaGGGTACAGGGTTTTCATCTGTGGCATCAGGTTTA +
Preference number: 3 (lower is better)
Translates to: GHSLQKGDWHNT*GTGFSSVASGL
Trigger: TAAACCTGATGCCACAGATGAAAACCCTGTACCTCACGTATTGTGCCAATCACCCTTCTGCAGTGAATGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469877.5
3UTR GCA 72 bp AAGAACCGTAAACAGCAACACAACACTCTCCCAAGGTaGCCAGCTCAAAGGCATCAGTACACAAAGGATTCA +
Preference number: 3 (lower is better)
Translates to: KNRKQQHNTLPR*PAQRHQYTKDS
Trigger: TGAATCCTTTGTGTACTGATGCCTTTGAGCTGGGCACCTTGGGAGAGTGTTGTGTTGCTGTTTACGGTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR CCA 72 bp TCAGAGTCAATCCCTCCTGTCTGGATTCATCAGTCATaGTTTGATCGTCTCCATTCGCAGAATAAGCTCCAG +
Preference number: 3 (lower is better)
Translates to: SESIPPVWIHQS*FDRLHSQNKLQ
Trigger: CTGGAGCTTATTCTGCGAATGGAGACGATCAAACCATGACTGATGAATCCAGACAGGAGGGATTGACTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CAA 90 bp TATCAAGTTCCCACCCCCTTGGGAGGTCACACGGTGAAACAGACACAGTTATATGGTCACCCTTATTTATaGCTGAAGCAGAACGAAAAC +
Preference number: 3 (lower is better)
Translates to: YQVPTPLGGHTVKQTQLYGHPYL*LKQNEN
Trigger: GTTTTCGTTCTGCTTCAGCAATAAATAAGGGTGACC...ATATAACTGTGTCTGTTTCACCGTGTGACCTCCCAAGGGGGTGGGAACTTGATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CAA 90 bp AAACAATGGCCCTCTGGATGCCACATCGCCACTGCCACAGGAGAACTGTCTTTTCGATACAACAAGCATTaGTTAAGAAAAGCTCAGAAG +
Preference number: 3 (lower is better)
Translates to: KQWPSGCHIATATGELSFRYNKH*LRKAQK
Trigger: CTTCTGAGCTTTTCTTAACAAATGCTTGTTGTATCG...AAAAGACAGTTCTCCTGTGGCAGTGGCGATGTGGCATCCAGAGGGCCATTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR CAA 90 bp CGATTACCAGAACACAGCCGTTGGAACTGGGCTCACAGCACCTTTGCTGCATATCGATACAACAAGCATTaGTTAAGAAAAGCTCAGAAG +
Preference number: 3 (lower is better)
Translates to: RLPEHSRWNWAHSTFAAYRYNKH*LRKAQK
Trigger: CTTCTGAGCTTTTCTTAACAAATGCTTGTTGTATCG...ATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR CAA 90 bp GTGGGGAAGAAAGAAATCACGGCCACCTGGAATTACAGCCACCCTGAAGAAGGAATTTACTATGGCATCTaGTTTTCTGAAGCTGGTTTC +
Preference number: 3 (lower is better)
Translates to: VGKKEITATWNYSHPEEGIYYGI*FSEAGF
Trigger: GAAACCAGCTTCAGAAAACAAGATGCCATAGTAAAT...TCCTTCTTCAGGGTGGCTGTAATTCCAGGTGGCCGTGATTTCTTTCTTCCCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR CAA 90 bp AAACAATGGCCCTCTGGATGCCACATCGCCACTGCCACAGGAGAACTGTCTTTTCAGTTCAGTAGCTACTaGGGAACAAATATTTGGAAT +
Preference number: 3 (lower is better)
Translates to: KQWPSGCHIATATGELSFQFSSY*GTNIWN
Trigger: ATTCCAAATATTTGTTCCCAAGTAGCTACTGAACTG...AAAAGACAGTTCTCCTGTGGCAGTGGCGATGTGGCATCCAGAGGGCCATTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR TCA 72 bp GGTATTAAAGGAAAATCCAAGTGCAGCAACTGTGTTTaGGTGTTGTGGTCTACACAGCCCATGACACAGGCA +
Preference number: 3 (lower is better)
Translates to: GIKGKSKCSNCV*VLWSTQPMTQA
Trigger: TGCCTGTGTCATGGGCTGTGTAGACCACAACACTCAAACACAGTTGCTGCACTTGGATTTTCCTTTAATACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR GCA 72 bp GCACTGGAACACAGTGGGGGAAACGTTCCCTGCTTATaGCTATGTTACTTAGTGGAACCTAAGGTGTATATT +
Preference number: 3 (lower is better)
Translates to: ALEHSGGNVPCL*LCYLVEPKVYI
Trigger: AATATACACCTTAGGTTCCACTAAGTAACATAGGCATAAGCAGGGAACGTTTCCCCCACTGTGTTCCAGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR GCA 72 bp GTACAGGCTTGCTATGTGCCTTATAACAGAAATCACTaGAATTCAGGGAAGTTTGGGGTGAAGATGCGAGTG +
Preference number: 3 (lower is better)
Translates to: VQACYVPYNRNH*NSGKFGVKMRV
Trigger: CACTCGCATCTTCACCCCAAACTTCCCTGAATTGCAGTGATTTCTGTTATAAGGCACATAGCAAGCCTGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR CAA 90 bp GCTTGTTCCATGCTGAATGAAGCCACCCAACTTTCTAAACAACGTGCTACTGCCCATTACAATGAGGCATaGTGGTTTTATACTATGGGG +
Preference number: 3 (lower is better)
Translates to: ACSMLNEATQLSKQRATAHYNEA*WFYTMG
Trigger: CCCCATAGTATAAAACCACAATGCCTCATTGTAATG...GGCAGTAGCACGTTGTTTAGAAAGTTGGGTGGCTTCATTCAGCATGGAACAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR TCA 72 bp AAAGTGTTGATCTTTGCTTGTGCCCGCATGAGTGAATaGTCTGCTAAGTTGAGGAAGCTGGCAATTCTAGTG +
Preference number: 3 (lower is better)
Translates to: KVLIFACARMSE*SAKLRKLAILV
Trigger: CACTAGAATTGCCAGCTTCCTCAACTTAGCAGATCATTCACTCATGCGGGCACAAGCAAAGATCAACACTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR-3UTR CAA 90 bp CCTCTACTACAGTCCAGTAGTCTACACTTGCAGAGGCTGAATGCTTCAGCTTTCCGATACAACAAGCATTaGTTAAGAAAAGCTCAGAAG +
Preference number: 3 (lower is better)
Translates to: PLLQSSSLHLQRLNASAFRYNKH*LRKAQK
Trigger: CTTCTGAGCTTTTCTTAACAAATGCTTGTTGTATCG...GAAAGCTGAAGCATTCAGCCTCTGCAAGTGTAGACTACTGGACTGTAGTAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR CAA 90 bp GCTTGTTCCATGCTGAATGAAGCCACCCAACTTTCTAAACAACGTGCTACTGCCATTTACTATGGCATCTaGTTTTCTGAAGCTGGTTTC +
Preference number: 3 (lower is better)
Translates to: ACSMLNEATQLSKQRATAIYYGI*FSEAGF
Trigger: GAAACCAGCTTCAGAAAACAAGATGCCATAGTAAAT...GGCAGTAGCACGTTGTTTAGAAAGTTGGGTGGCTTCATTCAGCATGGAACAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR TCA 72 bp GGTCACATTCAGTGCTTTTTGAAGCAGAAATTGGTCTaGGTGAGGCCAGTGAAAACTCCTTACAACAAATCC +
Preference number: 3 (lower is better)
Translates to: GHIQCFLKQKLV*VRPVKTPYNKS
Trigger: GGATTTGTTGTAAGGAGTTTTCACTGGCCTCACTCAGACCAATTTCTGCTTCAAAAAGCACTGAATGTGACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR GCA 72 bp GTAGCTACTTGGGAACAAATATTTGGAATTAACAGCTaGCCTGATGTCTCCTGTGCCATTAGCTTGTTCCAT +
Preference number: 3 (lower is better)
Translates to: VATWEQIFGINS*PDVSCAISLFH
Trigger: ATGGAACAAGCTAATGGCACAGGAGACATCAGGGCAGCTGTTAATTCCAAATATTTGTTCCCAAGTAGCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR CAA 90 bp GAAATTGGTCTGAGTGAGGCCAGTGAAAACTCCTTACAACAAATCCCAGGAAAATCTCTCCACAACTACTaGATCAGTGTTCATAGCACT +
Preference number: 3 (lower is better)
Translates to: EIGLSEASENSLQQIPGKSLHNY*ISVHST
Trigger: AGTGCTATGAACACTGATCAAGTAGTTGTGGAGAGA...TTTTCCTGGGATTTGTTGTAAGGAGTTTTCACTGGCCTCACTCAGACCAATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR TCA 72 bp GTCTGGGACTGTAATGCTGCTTTAAGAGAAGACTTCTaGATGGGACTGAAGTGTATCTCTGCAGGTATAAAT +
Preference number: 3 (lower is better)
Translates to: VWDCNAALREDF*MGLKCISAGIN
Trigger: ATTTATACCTGCAGAGATACACTTCAGTCCCATTCAGAAGTCTTCTCTTAAAGCAGCATTACAGTCCCAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR TCA 72 bp TTTGAGGGAAGACAAAACAGTGTATTTTGTTGTTACTaGACTAGCCTATACAGAACCGTCTGTGTCCTCCCA +
Preference number: 3 (lower is better)
Translates to: FEGRQNSVFCCY*TSLYRTVCVLP
Trigger: TGGGAGGACACAGACGGTTCTGTATAGGCTAGTTCAGTAACAACAAAATACACTGTTTTGTCTTCCCTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR CCA 72 bp TATCCCATTACAATGAGGCATTGTGGTTTTATACTATaGGGTTGCTGTAAATGGAGTTTCACTGCAGCTGGT +
Preference number: 3 (lower is better)
Translates to: YPITMRHCGFIL*GCCKWSFTAAG
Trigger: ACCAGCTGCAGTGAAACTCCATTTACAGCAACCCCATAGTATAAAACCACAATGCCTCATTGTAATGGGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR-3UTR CAA 90 bp ACGGTGAAACAGACACAGTTATATACAACAGGGCAGGTTTTTAAAAAGAGTTGCGGTCACCCTTATTTATaGCTGAAGCAGAACGAAAAC +
Preference number: 3 (lower is better)
Translates to: TVKQTQLYTTGQVFKKSCGHPYL*LKQNEN
Trigger: GTTTTCGTTCTGCTTCAGCAATAAATAAGGGTGACC...GCAACTCTTTTTAAAAACCTGCCCTGTTGTATATAACTGTGTCTGTTTCACCGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR TCA 72 bp ATTTGGCCAATAGACAGAAAATCAGAGAGTCAAATCTaGTGCGCAATGAGTTGTTCTGAGACCAGTAATCCA +
Preference number: 3 (lower is better)
Translates to: IWPIDRKSESQI*CAMSCSETSNP
Trigger: TGGATTACTGGTCTCAGAACAACTCATTGCGCATCAGATTTGACTCTCTGATTTTCTGTCTATTGGCCAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR GCA 72 bp AGAGATTTTACTGTAGAGTGGTACAGGCTTGCTATGTaGCTTATAACAGAAATCACTGCAATTCAGGGAAGT +
Preference number: 3 (lower is better)
Translates to: RDFTVEWYRLAM*LITEITAIQGS
Trigger: ACTTCCCTGAATTGCAGTGATTTCTGTTATAAGGCACATAGCAAGCCTGTACCACTCTACAGTAAAATCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR CCA 72 bp TTTTCACAGGAAAGGAAACCAAAAGCAAAGTCCCTGTaGTCACCCTTATTTATTGCTGAAGCAGAACGAAAA +
Preference number: 3 (lower is better)
Translates to: FSQERKPKAKSL*SPLFIAEAERK
Trigger: TTTTCGTTCTGCTTCAGCAATAAATAAGGGTGACCACAGGGACTTTGCTTTTGGTTTCCTTTCCTGTGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR CCA 72 bp GTTGTTCTGAGACCAGTAATCCACGGTGCTGCAATTTaGGTTTTTAAAGATAGAACACTTGTTCTACGGAAA +
Preference number: 3 (lower is better)
Translates to: VVLRPVIHGAAI*VFKDRTLVLRK
Trigger: TTTCCGTAGAACAAGTGTTCTATCTTTAAAAACCCAAATTGCAGCACCGTGGATTACTGGTCTCAGAACAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR TCA 72 bp AATTGTATGAACAGAAGATTCTATTATCAGCATGACTaGAGTCCCACAAAAGTAGAAACAATGGCCCTCTGG +
Preference number: 3 (lower is better)
Translates to: NCMNRRFYYQHD*SPTKVETMALW
Trigger: CCAGAGGGCCATTGTTTCTACTTTTGTGGGACTTCAGTCATGCTGATAATAGAATCTTCTGTTCATACAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR TCA 72 bp ACAGAATTGTATGAACAGAAGATTCTATTATCAGCATaGCTGAAGTCCCACAAAAGTAGAAACAATGGCCCT +
Preference number: 3 (lower is better)
Translates to: TELYEQKILLSA*LKSHKSRNNGP
Trigger: AGGGCCATTGTTTCTACTTTTGTGGGACTTCAGTCATGCTGATAATAGAATCTTCTGTTCATACAATTCTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR CAA 72 bp GCGGGCGTCAGCGGCGCGGGCTTGCTGTCTGCGTGCTaGCTGGACGGAGTGACCGGGTGGGAGGGGAGGGTA +
Preference number: 4 (lower is better)
Translates to: AGVSGAGLLSAC*LDGVTGWEGRV
Trigger: TACCCTCCCCTCCCACCCGGTCACTCCGTCCAGCAAGCACGCAGACAGCAAGCCCGCGCCGCTGACGCCCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR TCA 90 bp GTGGGAGGGGTGGGGCAGCGTGTGGTAGGCGGGCGTCAGCGGCGCGGGCTTGCTGTGCCTCCACCTTCATaGGCACTGCTTTCCGCTCCG +
Preference number: 4 (lower is better)
Translates to: VGGVGQRVVGGRQRRGLAVPPPS*ALLSAP
Trigger: CGGAGCGGAAAGCAGTGCTCATGAAGGTGGAGGCAC...AGCAAGCCCGCGCCGCTGACGCCCGCCTACCACACGCTGCCCCACCCCTCCCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR GCA 90 bp GTGGGAGGGGTGGGGCAGCGTGTGGTAGGCGGGCGTCAGCGGCGCGGGCTTGCTCCGGTTCCACCTCCATaGAGTCTCTGGGTGTGCCTC +
Preference number: 4 (lower is better)
Translates to: VGGVGQRVVGGRQRRGLAPVPPP*SLWVCL
Trigger: GAGGCACACCCAGAGACTGCATGGAGGTGGAACCGG...AGCAAGCCCGCGCCGCTGACGCCCGCCTACCACACGCTGCCCCACCCCTCCCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR GCA 90 bp CGTCAGCGGCGCGGGCTTGCTGTCTGCGTGCTTGCTGGACGGAGTGACCGGGTGCCTCGCGCACGTAGTTaGTGGGGAACCAGCCGGTCC +
Preference number: 4 (lower is better)
Translates to: RQRRGLAVCVLAGRSDRVPRARS*WGTSRS
Trigger: GGACCGGCTGGTTCCCCAGCAACTACGTGCGCGAGG...CACCCGGTCACTCCGTCCAGCAAGCACGCAGACAGCAAGCCCGCGCCGCTGACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR GCA 90 bp TGTGGTAGGCGGGCGTCAGCGGCGCGGGCTTGCTGTCTGCGTGCTTGCTGGACGTCAGCGGCGCGGGCTTaGTGTCTGCGTGCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: CGRRASAARACCLRACWTSAARA*CLRACW
Trigger: CCAGCAAGCACGCAGACAGCAAGCCCGCGCCGCTGA...CGTCCAGCAAGCACGCAGACAGCAAGCCCGCGCCGCTGACGCCCGCCTACCACA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR TCA 90 bp AAAACCTGCTCCACGGGCCGGGCTTCCTGCCCAGGACCGCACAGGCTTTCCAGAGCTTGCTGGACGGAGTaGCCGGGTGGGAGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: KTCSTGRASCPGPHRLSRACWTE*PGGRGG
Trigger: CCCTCCCCTCCCACCCGGTCACTCCGTCCAGCAAGC...TCTGGAAAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGTGGAGCAGGTTTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp AAAACCTGCTCCACGGGCCGGGCTTCCTGCCCAGGACCGCACAGGCTTTCCAGACTGGAGCGAGCCCGCTaGCCCAGATGCCAACCCGCT +
Preference number: 4 (lower is better)
Translates to: KTCSTGRASCPGPHRLSRLERAR*PRCQPA
Trigger: AGCGGGTTGGCATCTGGGGCAGCGGGCTCGCTCCAG...TCTGGAAAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGTGGAGCAGGTTTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218789.9
ENST00000375736.8
CDS-3UTR GCA 90 bp CGTGTGGTAGGCGGGCGTCAGCGGCGCGGGCTTGCTGTCTGCGTGCTTGCTGGAGGCTTGCTGTCTGCGTaGTTGCTGGACGGAGTGACC +
Preference number: 4 (lower is better)
Translates to: RVVGGRQRRGLAVCVLAGGLLSA*LLDGVT
Trigger: GGTCACTCCGTCCAGCAAGCACGCAGACAGCAAGCC...TCCAGCAAGCACGCAGACAGCAAGCCCGCGCCGCTGACGCCCGCCTACCACACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR TCA 90 bp GCGGCAGTGCCGTATGGGCCTTCCTTGAGGTCAAGACTGAGTCTGTCAGCCAGCACAGAGCACAAGCGCTaGGCGCCGTGGCCGGCAGCG +
Preference number: 4 (lower is better)
Translates to: AAVPYGPSLRSRLSLSASTEHKR*APWPAA
Trigger: CGCTGCCGGCCACGGCGCTCAGCGCTTGTGCTCTGT...GCTGGCTGACAGACTCAGTCTTGACCTCAAGGAAGGCCCATACGGCACTGCCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218789.9
ENST00000375736.8
CDS-3UTR TCA 90 bp GTGGGAGGGGTGGGGCAGCGTGTGGTAGGCGGGCGTCAGCGGCGCGGGCTTGCTGGTATGAGATGGCACTaGATGAGGCTTTATGGTGGG +
Preference number: 4 (lower is better)
Translates to: VGGVGQRVVGGRQRRGLAGMRWH*MRLYGG
Trigger: CCCACCATAAAGCCTCATTCAGTGCCATCTCATACC...AGCAAGCCCGCGCCGCTGACGCCCGCCTACCACACGCTGCCCCACCCCTCCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR TCA 90 bp CAGCACGGTGGAGGCCCTGGTGCTGCGGAACGAACCAGGCATCCACCAGGCTTCGGCAATGCCGTAACATaGGGCCCTCATGGCCGCACC +
Preference number: 4 (lower is better)
Translates to: QHGGGPGAAERTRHPPGFGNAVT*GPHGRT
Trigger: GGTGCGGCCATGAGGGCCTCATGTTACGGCATTGCC...GAAGCCTGGTGGATGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCACCGTGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp ACGGTGGAGGCCCTGGTGCTGCGGAACGAACCAGGCATCCACCAGGCTTCTGCTTCAGCGGCGCGGGCTTaGTGTCTGCGTGCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: TVEALVLRNEPGIHQASASAARA*CLRACW
Trigger: CCAGCAAGCACGCAGACAGCAAGCCCGCGCCGCTGA...AGCAGAAGCCTGGTGGATGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCACCGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp GCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGCACGGCGCTCCAGCAGCCTaGAGAGGACCACCCCATCCT +
Preference number: 4 (lower is better)
Translates to: AVRWRQALNTRDARPSVHGAPAA*RGPPHP
Trigger: AGGATGGGGTGGTCCTCTGCAGGCTGCTGGAGCGCC...GTGCACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317133.9
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp AGAGCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGCGCGCACGTAGTTGCTaGGGAACCAGCCGGTCCGGC +
Preference number: 4 (lower is better)
Translates to: RAVRWRQALNTRDARPSVRARSC*GTSRSG
Trigger: GCCGGACCGGCTGGTTCCCCAGCAACTACGTGCGCG...CACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGCTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp CTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGAGCCGGTCCGGCCGTTaGGTGTGCCCTCCCACCAGC +
Preference number: 4 (lower is better)
Translates to: LPRPRAHMLFCTITRTQPSRSGR*VCPPTS
Trigger: GCTGGTGGGAGGGCACACTCAACGGCCGGACCGGCT...CGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp AACGAAAACCTGCTCCACGGGCCGGGCTTCCTGCCCAGGACCGCACAGGCTTTCGCTTCTCGCTGGCCTTaGCCTCGCGCACGTAGTTGC +
Preference number: 4 (lower is better)
Translates to: NENLLHGPGFLPRTAQAFASRWP*PRARSC
Trigger: GCAACTACGTGCGCGAGGTCAAGGCCAGCGAGAAGC...GAAAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGTGGAGCAGGTTTTCGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp ACGCCCAGCGCATGTGGACAAGCACAGACGCCACTGAGTGTGAAGGAACGAGCTGCTTGCTGGACGGAGTaGCCGGGTGGGAGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: TPSACGQAQTPLSVKERAACWTE*PGGRGG
Trigger: CCCTCCCCTCCCACCCGGTCACTCCGTCCAGCAAGC...AGCTCGTTCCTTCACACTCAGTGGCGTCTGTGCTTGTCCACATGCGCTGGGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp CTTTCGGTGAGCACTGAAGCCTGCTGGCTACGGCCAATGGTGGAGGAGACCTCGCCCAGCGAGCCGCGGTaGGGACAGGCTTCGTCTCCT +
Preference number: 4 (lower is better)
Translates to: LSVSTEACWLRPMVEETSPSEPR*GQASSP
Trigger: AGGAGACGAAGCCTGTCCTCACCGCGGCTCGCTGGG...CGAGGTCTCCTCCACCATTGGCCGTAGCCAGCAGGCTTCAGTGCTCACCGAAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp GCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGCACAGCTCTGAACACACGTaGCGCCCGCCCGTCTGTGCA +
Preference number: 4 (lower is better)
Translates to: AVRWRQALNTRDARPSVHSSEHT*RPPVCA
Trigger: TGCACAGACGGGCGGGCGTCACGTGTGTTCAGAGCT...GTGCACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp AGAGCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGCCTCGCGCACGTAGTTaGTGGGGAACCAGCCGGTCC +
Preference number: 4 (lower is better)
Translates to: RAVRWRQALNTRDARPSVPRARS*WGTSRS
Trigger: GGACCGGCTGGTTCCCCAGCAACTACGTGCGCGAGG...CACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp ACGGTGGAGGCCCTGGTGCTGCGGAACGAACCAGGCATCCACCAGGCTTCTGCTCCCTGTGGTCCTGAGTaGACCCCGACTTGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: TVEALVLRNEPGIHQASAPCGPE*TPTWVR
Trigger: CCTGACCCAAGTCGGGGTGCACTCAGGACCACAGGG...AGCAGAAGCCTGGTGGATGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCACCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp AACGAAAACCTGCTCCACGGGCCGGGCTTCCTGCCCAGGACCGCACAGGCTTTCCCCTGTGGTCCTGAGTaGACCCCGACTTGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: NENLLHGPGFLPRTAQAFPCGPE*TPTWVR
Trigger: CCTGACCCAAGTCGGGGTGCACTCAGGACCACAGGG...GAAAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGTGGAGCAGGTTTTCGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp AAAACCTGCTCCACGGGCCGGGCTTCCTGCCCAGGACCGCACAGGCTTTCCAGATGGAGGCCCTGGTGCTaGGGAACGAACCAGGCATCC +
Preference number: 4 (lower is better)
Translates to: KTCSTGRASCPGPHRLSRWRPWC*GTNQAS
Trigger: GGATGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCA...TCTGGAAAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGTGGAGCAGGTTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp CAGCACGGTGGAGGCCCTGGTGCTGCGGAACGAACCAGGCATCCACCAGGCTTCGCTGGCTACGGCCAATaGTGGAGGAGACCTCGGGAT +
Preference number: 4 (lower is better)
Translates to: QHGGGPGAAERTRHPPGFAGYGQ*WRRPRD
Trigger: ATCCCGAGGTCTCCTCCACCATTGGCCGTAGCCAGC...GAAGCCTGGTGGATGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCACCGTGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp CTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGCGGCGTGGCCTGAAGTaGGGCTGTGCAGAGGGCCGG +
Preference number: 4 (lower is better)
Translates to: LPRPRAHMLFCTITRTQPRRGLK*GCAEGR
Trigger: CCGGCCCTCTGCACAGCCCCACTTCAGGCCACGCCG...CGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317133.9
CDS-3UTR TCA 90 bp ACCTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCGCTTGCTGGACGGAGTaGCCGGGTGGGAGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: TCQGPEPTCCSARLPEHSACWTE*PGGRGG
Trigger: CCCTCCCCTCCCACCCGGTCACTCCGTCCAGCAAGC...GCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp AAAACCTGCTCCACGGGCCGGGCTTCCTGCCCAGGACCGCACAGGCTTTCCAGACCCAGGCAGACAACGTaGCCAGTCACGGAAGGAAGC +
Preference number: 4 (lower is better)
Translates to: KTCSTGRASCPGPHRLSRPRQTT*PVTEGS
Trigger: GCTTCCTTCCGTGACTGGTCACGTTGTCTGCCTGGG...TCTGGAAAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGTGGAGCAGGTTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp GCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGCACGGTCTACACAGCCCATaGCACAGGCAACCCACGCCT +
Preference number: 4 (lower is better)
Translates to: AVRWRQALNTRDARPSVHGLHSP*HRQPTP
Trigger: AGGCGTGGGTTGCCTGTGTCATGGGCTGTGTAGACC...GTGCACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp AAAACCTGCTCCACGGGCCGGGCTTCCTGCCCAGGACCGCACAGGCTTTCCAGAGGCTTGCTGTCTGCGTaGTTGCTGGACGGAGTGACC +
Preference number: 4 (lower is better)
Translates to: KTCSTGRASCPGPHRLSRGLLSA*LLDGVT
Trigger: GGTCACTCCGTCCAGCAAGCACGCAGACAGCAAGCC...TCTGGAAAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGTGGAGCAGGTTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp TGTGGTCCTGAGTGCACCCCGACTTGGGTCAGGGGTGCCCAGCTTCACCTCAGACGCGGGCTTGCTGTCTaGGTGCTTGCTGGACGGAGT +
Preference number: 4 (lower is better)
Translates to: CGPECTPTWVRGAQLHLRRGLAV*VLAGRS
Trigger: ACTCCGTCCAGCAAGCACGCAGACAGCAAGCCCGCG...TCTGAGGTGAAGCTGGGCACCCCTGACCCAAGTCGGGGTGCACTCAGGACCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp TGTGGTCCTGAGTGCACCCCGACTTGGGTCAGGGGTGCCCAGCTTCACCTCAGAGGTGAGGCCAGGTTCTaGAGCATGGGGCAGGTCCAC +
Preference number: 4 (lower is better)
Translates to: CGPECTPTWVRGAQLHLRGEARF*SMGQVH
Trigger: GTGGACCTGCCCCATGCTGCAGAACCTGGCCTCACC...TCTGAGGTGAAGCTGGGCACCCCTGACCCAAGTCGGGGTGCACTCAGGACCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp TGTGGTAGGCGGGCGTCAGCGGCGCGGGCTTGCTGTCTGCGTGCTTGCTGGACGGCTCCCAAATGTGTCTaGTGGCAGGCATGCCTTTCA +
Preference number: 4 (lower is better)
Translates to: CGRRASAARACCLRACWTAPKCV*WQACLS
Trigger: TGAAAGGCATGCCTGCCAGCAGACACATTTGGGAGC...CGTCCAGCAAGCACGCAGACAGCAAGCCCGCGCCGCTGACGCCCGCCTACCACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR CCA 90 bp CAGCACGGTGGAGGCCCTGGTGCTGCGGAACGAACCAGGCATCCACCAGGCTTCTCAGGCTCCAGGGCTTaGGTGTTTTCGGAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: QHGGGPGAAERTRHPPGFSGSRA*VFSEAP
Trigger: TGGAGCCTCCGAAAACACCCAAGCCCTGGAGCCTGA...GAAGCCTGGTGGATGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCACCGTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp ACGCCCAGCGCATGTGGACAAGCACAGACGCCACTGAGTGTGAAGGAACGAGCTGCTGCCACAGCACGGTaGAGGCCCTGGTGCTGCGGA +
Preference number: 4 (lower is better)
Translates to: TPSACGQAQTPLSVKERAAATAR*RPWCCG
Trigger: TCCGCAGCACCAGGGCCTCCACCGTGCTGTGGCAGC...AGCTCGTTCCTTCACACTCAGTGGCGTCTGTGCTTGTCCACATGCGCTGGGCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp CAGCACGGTGGAGGCCCTGGTGCTGCGGAACGAACCAGGCATCCACCAGGCTTCTGCGGCAGTGCCGTATaGGCCTTCCTTGAGGTCAAG +
Preference number: 4 (lower is better)
Translates to: QHGGGPGAAERTRHPPGFCGSAV*AFLEVK
Trigger: CTTGACCTCAAGGAAGGCCCATACGGCACTGCCGCA...GAAGCCTGGTGGATGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCACCGTGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp AAAACCTGCTCCACGGGCCGGGCTTCCTGCCCAGGACCGCACAGGCTTTCCAGAGGCTACGGCCAATGGTaGAGGAGACCTCGGGATGAG +
Preference number: 4 (lower is better)
Translates to: KTCSTGRASCPGPHRLSRGYGQW*RRPRDE
Trigger: CTCATCCCGAGGTCTCCTCCACCATTGGCCGTAGCC...TCTGGAAAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGTGGAGCAGGTTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp ACGGTGGAGGCCCTGGTGCTGCGGAACGAACCAGGCATCCACCAGGCTTCTGCTGACGCCCAGCGCATGTaGACAAGCACAGACGCCACT +
Preference number: 4 (lower is better)
Translates to: TVEALVLRNEPGIHQASADAQRM*TSTDAT
Trigger: AGTGGCGTCTGTGCTTGTCCACATGCGCTGGGCGTC...AGCAGAAGCCTGGTGGATGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCACCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp AGAGCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGGCTCCCTGGCAGCTCTaGGCTTGTGAGCAGCAGGAC +
Preference number: 4 (lower is better)
Translates to: RAVRWRQALNTRDARPSVAPWQL*ACEQQD
Trigger: GTCCTGCTGCTCACAAGCCCAGAGCTGCCAGGGAGC...CACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGCTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp AGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAAAGCCGGTCCGGCCGTTaGGTGTGCCCTCCCACCAGC +
Preference number: 4 (lower is better)
Translates to: RPRAHMLFCTITRTQPLESRSGR*VCPPTS
Trigger: GCTGGTGGGAGGGCACACTCAACGGCCGGACCGGCT...TTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp AGAGCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGCCTCCGACTCTCTGCTaGGCTTCGGGCAACTTGGTG +
Preference number: 4 (lower is better)
Translates to: RAVRWRQALNTRDARPSVPPTLC*ASGNLV
Trigger: CACCAAGTTGCCCGAAGCTCAGCAGAGAGTCGGAGG...CACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp AGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAAGCTTGCTGGACGGAGTaGCCGGGTGGGAGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: RPRAHMLFCTITRTQPLEACWTE*PGGRGG
Trigger: CCCTCCCCTCCCACCCGGTCACTCCGTCCAGCAAGC...TTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp ACGCCCAGCGCATGTGGACAAGCACAGACGCCACTGAGTGTGAAGGAACGAGCTCCTGCCCTGTGGTCCTaGGTGCACCCCGACTTGGGT +
Preference number: 4 (lower is better)
Translates to: TPSACGQAQTPLSVKERAPALWS*VHPDLG
Trigger: ACCCAAGTCGGGGTGCACTCAGGACCACAGGGCAGG...AGCTCGTTCCTTCACACTCAGTGGCGTCTGTGCTTGTCCACATGCGCTGGGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp CTGGGGACTCGGACAGCAACGCTACCGGCTCCGAGAGGACAGTTAATGTCGCCTGGCAATGCCGTAACATaGGGCCCTCATGGCCGCACC +
Preference number: 4 (lower is better)
Translates to: LGTRTATLPAPRGQLMSPGNAVT*GPHGRT
Trigger: GGTGCGGCCATGAGGGCCTCATGTTACGGCATTGCC...AGGCGACATTAACTGTCCTCTCGGAGCCGGTAGCGTTGCTGTCCGAGTCCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp CTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGGCTCTAGACGGACGGTaGCGCTTCAGACCCTGCCGG +
Preference number: 4 (lower is better)
Translates to: LPRPRAHMLFCTITRTQPALDGR*RFRPCR
Trigger: CCGGCAGGGTCTGAAGCGTCACCGTCCGTCTAGAGC...CGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317133.9
CDS-3UTR GCA 90 bp GCGGCAGTGCCGTATGGGCCTTCCTTGAGGTCAAGACTGAGTCTGTCAGCCAGCGGTGAGGCCAGGTTCTaGAGCATGGGGCAGGTCCAC +
Preference number: 4 (lower is better)
Translates to: AAVPYGPSLRSRLSLSASGEARF*SMGQVH
Trigger: GTGGACCTGCCCCATGCTGCAGAACCTGGCCTCACC...GCTGGCTGACAGACTCAGTCTTGACCTCAAGGAAGGCCCATACGGCACTGCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp ACGGTGGAGGCCCTGGTGCTGCGGAACGAACCAGGCATCCACCAGGCTTCTGCTGCATTAAGGCAGGTCTaGAGGAGATCCGTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: TVEALVLRNEPGIHQASAALRQV*RRSVLG
Trigger: CCCCAGGACGGATCTCCTGCAGACCTGCCTTAATGC...AGCAGAAGCCTGGTGGATGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCACCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp GCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGCACGTTTGCTCAGGCCCGTaGTCAGCACGAGAATCCCAG +
Preference number: 4 (lower is better)
Translates to: AVRWRQALNTRDARPSVHVCSGP*SARESQ
Trigger: CTGGGATTCTCGTGCTGACCACGGGCCTGAGCAAAC...GTGCACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp ACGGTGGAGGCCCTGGTGCTGCGGAACGAACCAGGCATCCACCAGGCTTCTGCTGTTTGCTCAGGCCCGTaGTCAGCACGAGAATCCCAG +
Preference number: 4 (lower is better)
Translates to: TVEALVLRNEPGIHQASAVCSGP*SARESQ
Trigger: CTGGGATTCTCGTGCTGACCACGGGCCTGAGCAAAC...AGCAGAAGCCTGGTGGATGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCACCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp GCGTGTGGTAGGCGGGCGTCAGCGGCGCGGGCTTGCTGTCTGCGTGCTTGCTGGTCCTGCAGATCCTGCTaGTTGTTGCACGACACTAAT +
Preference number: 4 (lower is better)
Translates to: ACGRRASAARACCLRACWSCRSC*LLHDTN
Trigger: ATTAGTGTCGTGCAACAACCAGCAGGATCTGCAGGA...CCAGCAAGCACGCAGACAGCAAGCCCGCGCCGCTGACGCCCGCCTACCACACGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR CCA 90 bp ACGGTGGAGGCCCTGGTGCTGCGGAACGAACCAGGCATCCACCAGGCTTCTGCTTCAGGCTCCAGGGCTTaGGTGTTTTCGGAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: TVEALVLRNEPGIHQASASGSRA*VFSEAP
Trigger: TGGAGCCTCCGAAAACACCCAAGCCCTGGAGCCTGA...AGCAGAAGCCTGGTGGATGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCACCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp CTGGGGACTCGGACAGCAACGCTACCGGCTCCGAGAGGACAGTTAATGTCGCCTGCAGGAGATCCGTCCTaGGGACTCGGACAGCAACGC +
Preference number: 4 (lower is better)
Translates to: LGTRTATLPAPRGQLMSPAGDPS*GLGQQR
Trigger: GCGTTGCTGTCCGAGTCCCCAGGACGGATCTCCTGC...AGGCGACATTAACTGTCCTCTCGGAGCCGGTAGCGTTGCTGTCCGAGTCCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp GCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGCACTATGGATGTCAGGGGTaGGGAGCCGGGGGAACTGAA +
Preference number: 4 (lower is better)
Translates to: AVRWRQALNTRDARPSVHYGCQG*GAGGTE
Trigger: TTCAGTTCCCCCGGCTCCCCACCCCTGACATCCATA...GTGCACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp GCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGCACCAAACGTTTTCTCGATaGTCCCGGGGAGCAGGCGCT +
Preference number: 4 (lower is better)
Translates to: AVRWRQALNTRDARPSVHQTFSR*SRGAGA
Trigger: AGCGCCTGCTCCCCGGGACCATCGAGAAAACGTTTG...GTGCACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375739.6
CDS-3UTR TCA 90 bp CTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGGCTTCTCGCTGGCCTTaGCCTCGCGCACGTAGTTGC +
Preference number: 4 (lower is better)
Translates to: LPRPRAHMLFCTITRTQPASRWP*PRARSC
Trigger: GCAACTACGTGCGCGAGGTCAAGGCCAGCGAGAAGC...CGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp GCGGCAGTGCCGTATGGGCCTTCCTTGAGGTCAAGACTGAGTCTGTCAGCCAGCCCTCCGACTCTCTGCTaGGCTTCGGGCAACTTGGTG +
Preference number: 4 (lower is better)
Translates to: AAVPYGPSLRSRLSLSASPPTLC*ASGNLV
Trigger: CACCAAGTTGCCCGAAGCTCAGCAGAGAGTCGGAGG...GCTGGCTGACAGACTCAGTCTTGACCTCAAGGAAGGCCCATACGGCACTGCCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp ACCTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCGCCGCCGTCGCCCAATaGCATCACCGCCAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: TCQGPEPTCCSARLPEHSAAVAQ*HHRQEK
Trigger: CTTCTCCTGGCGGTGATGTCATTGGGCGACGGCGGC...GCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317133.9
CDS-3UTR TCA 90 bp TGTGGTAGGCGGGCGTCAGCGGCGCGGGCTTGCTGTCTGCGTGCTTGCTGGACGAGACCTCAGAGTTTCTaGAGGACAACAGCAACAACC +
Preference number: 4 (lower is better)
Translates to: CGRRASAARACCLRACWTRPQSF*RTTATT
Trigger: GGTTGTTGCTGTTGTCCTTCAGAAACTCTGAGGTCT...CGTCCAGCAAGCACGCAGACAGCAAGCCCGCGCCGCTGACGCCCGCCTACCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR GCA 90 bp CAGCACGGTGGAGGCCCTGGTGCTGCGGAACGAACCAGGCATCCACCAGGCTTCGCTTCCGTCAGGATCTaGAGCTCAAGCTCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: QHGGGPGAAERTRHPPGFASVRI*SSSSFL
Trigger: GAGGAAAGAGCTTGAGCTGCAGATCCTGACGGAAGC...GAAGCCTGGTGGATGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCACCGTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp CTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGCGCGGGCTTGCTGTCTaGGTGCTTGCTGGACGGAGT +
Preference number: 4 (lower is better)
Translates to: LPRPRAHMLFCTITRTQPRGLAV*VLAGRS
Trigger: ACTCCGTCCAGCAAGCACGCAGACAGCAAGCCCGCG...CGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp ACCTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCTCAGCGGCGCGGGCTTaGTGTCTGCGTGCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: TCQGPEPTCCSARLPEHSSAARA*CLRACW
Trigger: CCAGCAAGCACGCAGACAGCAAGCCCGCGCCGCTGA...GCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp GCGGCAGTGCCGTATGGGCCTTCCTTGAGGTCAAGACTGAGTCTGTCAGCCAGCAGCAGAACGAAAACCTaGTCCACGGGCCGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: AAVPYGPSLRSRLSLSASSRTKT*STGRAS
Trigger: GGAAGCCCGGCCCGTGGAGCAGGTTTTCGTTCTGCT...GCTGGCTGACAGACTCAGTCTTGACCTCAAGGAAGGCCCATACGGCACTGCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp CCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAACTGGGCTCACACGCCCGCCCGTCTGTaGACCTGCCAAGGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: PTCCSARLPEHSRWNWAHTPARL*TCQGPE
Trigger: CTCTGGGCCTTGGCAGGTGCACAGACGGGCGGGCGT...GTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp TTACGAAGAGCACCCTCGGATGTAGGCTCACGTGAACACACCACCTCCCTCCAACGCGCACGTAGTTGCTaGGGAACCAGCCGGTCCGGC +
Preference number: 4 (lower is better)
Translates to: LRRAPSDVGSREHTTSLQRARSC*GTSRSG
Trigger: GCCGGACCGGCTGGTTCCCCAGCAACTACGTGCGCG...TTGGAGGGAGGTGGTGTGTTCACGTGAGCCTACATCCGAGGGTGCTCTTCGTAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp TTTAATGTCATCGCCCTCCCAGTTCCGGATGGCTTCCGTCAGGATCTGCAGCTCCGCGCACGTAGTTGCTaGGGAACCAGCCGGTCCGGC +
Preference number: 4 (lower is better)
Translates to: FNVIALPVPDGFRQDLQLRARSC*GTSRSG
Trigger: GCCGGACCGGCTGGTTCCCCAGCAACTACGTGCGCG...GAGCTGCAGATCCTGACGGAAGCCATCCGGAACTGGGAGGGCGATGACATTAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR CCA 90 bp AGAGCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGTCAGGCTCCAGGGCTTaGGTGTTTTCGGAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: RAVRWRQALNTRDARPSVSGSRA*VFSEAP
Trigger: TGGAGCCTCCGAAAACACCCAAGCCCTGGAGCCTGA...CACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp ACGCCCAGCGCATGTGGACAAGCACAGACGCCACTGAGTGTGAAGGAACGAGCTATACAGAGAGCAAGGTaGCGCCCCACCCAGCCCTGC +
Preference number: 4 (lower is better)
Translates to: TPSACGQAQTPLSVKERAIQRAR*RPTQPC
Trigger: GCAGGGCTGGGTGGGGCGCCACCTTGCTCTCTGTAT...AGCTCGTTCCTTCACACTCAGTGGCGTCTGTGCTTGTCCACATGCGCTGGGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp CTTTCGGTGAGCACTGAAGCCTGCTGGCTACGGCCAATGGTGGAGGAGACCTCGGGCTTCTGCTTCCGGTaGATGCGGGCATGGGACTTC +
Preference number: 4 (lower is better)
Translates to: LSVSTEACWLRPMVEETSGFCFR*MRAWDF
Trigger: GAAGTCCCATGCCCGCATCCACCGGAAGCAGAAGCC...CGAGGTCTCCTCCACCATTGGCCGTAGCCAGCAGGCTTCAGTGCTCACCGAAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp ACGGTGGAGGCCCTGGTGCTGCGGAACGAACCAGGCATCCACCAGGCTTCTGCTGCAAACACCTCTAGGTaGATGCGGCAGTGCCGTATG +
Preference number: 4 (lower is better)
Translates to: TVEALVLRNEPGIHQASAANTSR*MRQCRM
Trigger: CATACGGCACTGCCGCATCCACCTAGAGGTGTTTGC...AGCAGAAGCCTGGTGGATGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCACCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp AAAACCTGCTCCACGGGCCGGGCTTCCTGCCCAGGACCGCACAGGCTTTCCAGAGCAAACACCTCTAGGTaGATGCGGCAGTGCCGTATG +
Preference number: 4 (lower is better)
Translates to: KTCSTGRASCPGPHRLSRANTSR*MRQCRM
Trigger: CATACGGCACTGCCGCATCCACCTAGAGGTGTTTGC...TCTGGAAAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGTGGAGCAGGTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp CTTTCGGTGAGCACTGAAGCCTGCTGGCTACGGCCAATGGTGGAGGAGACCTCGAACATGAGGCCCTCATaGCCGCACCGTCCAGGGGAA +
Preference number: 4 (lower is better)
Translates to: LSVSTEACWLRPMVEETSNMRPS*PHRPGE
Trigger: TTCCCCTGGACGGTGCGGCCATGAGGGCCTCATGTT...CGAGGTCTCCTCCACCATTGGCCGTAGCCAGCAGGCTTCAGTGCTCACCGAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp GCGGCAGTGCCGTATGGGCCTTCCTTGAGGTCAAGACTGAGTCTGTCAGCCAGCAACATGAGGCCCTCATaGCCGCACCGTCCAGGGGAA +
Preference number: 4 (lower is better)
Translates to: AAVPYGPSLRSRLSLSASNMRPS*PHRPGE
Trigger: TTCCCCTGGACGGTGCGGCCATGAGGGCCTCATGTT...GCTGGCTGACAGACTCAGTCTTGACCTCAAGGAAGGCCCATACGGCACTGCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp ACGGTGGAGGCCCTGGTGCTGCGGAACGAACCAGGCATCCACCAGGCTTCTGCTTGTCAACAGGCGCCCTaGGTGTCCCAGAGAAGTGAA +
Preference number: 4 (lower is better)
Translates to: TVEALVLRNEPGIHQASACQQAP*VSQRSE
Trigger: TTCACTTCTCTGGGACACCCAGGGCGCCTGTTGACA...AGCAGAAGCCTGGTGGATGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCACCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp CTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGCTGCCAGGAGCTCCCTaGCAGCTCTGGGCTTGTGAG +
Preference number: 4 (lower is better)
Translates to: LPRPRAHMLFCTITRTQPLPGAP*QLWACE
Trigger: CTCACAAGCCCAGAGCTGCCAGGGAGCTCCTGGCAG...CGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp GCGGGCATGGGACTTCTTATTCACGTAGCTGGAAAGGACATTCTAGCATGGGGAACAGAGCACAAGCGCTaGGCGCCGTGGCCGGCAGCG +
Preference number: 4 (lower is better)
Translates to: AGMGLLIHVAGKDILAWGTEHKR*APWPAA
Trigger: CGCTGCCGGCCACGGCGCTCAGCGCTTGTGCTCTGT...TCCCCATGCTAGAATGTCCTTTCCAGCTACGTGAATAAGAAGTCCCATGCCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218789.9
ENST00000375736.8
CDS-3UTR TCA 90 bp CTTTCGGTGAGCACTGAAGCCTGCTGGCTACGGCCAATGGTGGAGGAGACCTCGAAAGACTTTATGCGGTaGGACGAGGGCCGGGCACAC +
Preference number: 4 (lower is better)
Translates to: LSVSTEACWLRPMVEETSKDFMR*DEGRAH
Trigger: GTGTGCCCGGCCCTCGTCTCACCGCATAAAGTCTTT...CGAGGTCTCCTCCACCATTGGCCGTAGCCAGCAGGCTTCAGTGCTCACCGAAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp AGAACCGTAAACAGCAACACAACACTCTCCCAAGGTGCCCAGCTCAAAGGCATCAGCCGGTCCGGCCGTTaGGTGTGCCCTCCCACCAGC +
Preference number: 4 (lower is better)
Translates to: RTVNSNTTLSQGAQLKGISRSGR*VCPPTS
Trigger: GCTGGTGGGAGGGCACACTCAACGGCCGGACCGGCT...GATGCCTTTGAGCTGGGCACCTTGGGAGAGTGTTGTGTTGCTGTTTACGGTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp GCGGGCATGGGACTTCTTATTCACGTAGCTGGAAAGGACATTCTAGCATGGGGAAGCCGGTCCGGCCGTTaGGTGTGCCCTCCCACCAGC +
Preference number: 4 (lower is better)
Translates to: AGMGLLIHVAGKDILAWGSRSGR*VCPPTS
Trigger: GCTGGTGGGAGGGCACACTCAACGGCCGGACCGGCT...TCCCCATGCTAGAATGTCCTTTCCAGCTACGTGAATAAGAAGTCCCATGCCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp CTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGCCTCCGACTCTCTGCTaGGCTTCGGGCAACTTGGTG +
Preference number: 4 (lower is better)
Translates to: LPRPRAHMLFCTITRTQPPPTLC*ASGNLV
Trigger: CACCAAGTTGCCCGAAGCTCAGCAGAGAGTCGGAGG...CGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp GGACATGTAAGTGACGTTGCCCAGAGTTTTAATGTCATCGCCCTCCCAGTTCCGGCTTGCTGGACGGAGTaGCCGGGTGGGAGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: GHVSDVAQSFNVIALPVPACWTE*PGGRGG
Trigger: CCCTCCCCTCCCACCCGGTCACTCCGTCCAGCAAGC...CGGAACTGGGAGGGCGATGACATTAAAACTCTGGGCAACGTCACTTACATGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR TCA 90 bp AACGAAAACCTGCTCCACGGGCCGGGCTTCCTGCCCAGGACCGCACAGGCTTTCGTCTTCCGAGAGGTCTaGAGGCTCCAAACGAGAAAG +
Preference number: 4 (lower is better)
Translates to: NENLLHGPGFLPRTAQAFVFREV*RLQTRK
Trigger: CTTTCTCGTTTGGAGCCTTCAGACCTCTCGGAAGAC...GAAAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGTGGAGCAGGTTTTCGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000218789.9
CDS-3UTR TCA 90 bp GCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGCACGTCTTCCGAGAGGTCTaGAGGCTCCAAACGAGAAAG +
Preference number: 4 (lower is better)
Translates to: AVRWRQALNTRDARPSVHVFREV*RLQTRK
Trigger: CTTTCTCGTTTGGAGCCTTCAGACCTCTCGGAAGAC...GTGCACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp ACGGTGGAGGCCCTGGTGCTGCGGAACGAACCAGGCATCCACCAGGCTTCTGCTGGATTTTACTTTCGGTaGGCACTGAAGCCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: TVEALVLRNEPGIHQASAGFYFR*ALKPAG
Trigger: GCCAGCAGGCTTCAGTGCTCACCGAAAGTAAAATCC...AGCAGAAGCCTGGTGGATGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCACCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp AGAGCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGGTGGCGGGGACAGGCTaGAAACGAGACGTTTGTTTC +
Preference number: 4 (lower is better)
Translates to: RAVRWRQALNTRDARPSVVAGTG*KRDVCF
Trigger: GAAACAAACGTCTCGTTTTCAGCCTGTCCCCGCCAC...CACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317133.9
CDS-3UTR GCA 90 bp CTTTCGGTGAGCACTGAAGCCTGCTGGCTACGGCCAATGGTGGAGGAGACCTCGCGAGAATCCCAGGGCTaGTGGCACCTTTGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: LSVSTEACWLRPMVEETSRESQG*WHLWSP
Trigger: TGGAGACCAAAGGTGCCAGCAGCCCTGGGATTCTCG...CGAGGTCTCCTCCACCATTGGCCGTAGCCAGCAGGCTTCAGTGCTCACCGAAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp CTGGGGACTCGGACAGCAACGCTACCGGCTCCGAGAGGACAGTTAATGTCGCCTCGAGAATCCCAGGGCTaGTGGCACCTTTGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: LGTRTATLPAPRGQLMSPRESQG*WHLWSP
Trigger: TGGAGACCAAAGGTGCCAGCAGCCCTGGGATTCTCG...AGGCGACATTAACTGTCCTCTCGGAGCCGGTAGCGTTGCTGTCCGAGTCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp ACCTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGCGGGCTTGCTGTCTaGGTGCTTGCTGGACGGAGT +
Preference number: 4 (lower is better)
Translates to: TCQGPEPTCCSARLPEHSRGLAV*VLAGRS
Trigger: ACTCCGTCCAGCAAGCACGCAGACAGCAAGCCCGCG...GCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp CCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAACTGGGCTCACTCAGCGGCGCGGGCTTaGTGTCTGCGTGCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: PTCCSARLPEHSRWNWAHSAARA*CLRACW
Trigger: CCAGCAAGCACGCAGACAGCAAGCCCGCGCCGCTGA...GTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp AACGAAAACCTGCTCCACGGGCCGGGCTTCCTGCCCAGGACCGCACAGGCTTTCGCTTCCGTTCAGGTTTaGGCTTGGGCAGCAGCTTTT +
Preference number: 4 (lower is better)
Translates to: NENLLHGPGFLPRTAQAFASVQV*AWAAAF
Trigger: AAAAGCTGCTGCCCAAGCGCAAACCTGAACGGAAGC...GAAAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGTGGAGCAGGTTTTCGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp AGAGCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGAACGAGAAAGGCTACTaGGACGCCCCAGGGAGTCTA +
Preference number: 4 (lower is better)
Translates to: RAVRWRQALNTRDARPSVNEKGY*DAPGSL
Trigger: TAGACTCCCTGGGGCGTCGCAGTAGCCTTTCTCGTT...CACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp GCGGCAGTGCCGTATGGGCCTTCCTTGAGGTCAAGACTGAGTCTGTCAGCCAGCAGGCTTCGTCTCCTCTaGACTGGAACACAGTGGGGG +
Preference number: 4 (lower is better)
Translates to: AAVPYGPSLRSRLSLSASRLRLL*TGTQWG
Trigger: CCCCCACTGTGTTCCAGTGCAGAGGAGACGAAGCCT...GCTGGCTGACAGACTCAGTCTTGACCTCAAGGAAGGCCCATACGGCACTGCCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp CTGGGGACTCGGACAGCAACGCTACCGGCTCCGAGAGGACAGTTAATGTCGCCTAGGCTTCGTCTCCTCTaGACTGGAACACAGTGGGGG +
Preference number: 4 (lower is better)
Translates to: LGTRTATLPAPRGQLMSPRLRLL*TGTQWG
Trigger: CCCCCACTGTGTTCCAGTGCAGAGGAGACGAAGCCT...AGGCGACATTAACTGTCCTCTCGGAGCCGGTAGCGTTGCTGTCCGAGTCCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp GCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGCACAGCCACGTAACGGTTTaGTCGGCGGAATTCATCGCT +
Preference number: 4 (lower is better)
Translates to: AVRWRQALNTRDARPSVHSHVTV*SAEFIA
Trigger: AGCGATGAATTCCGCCGAGCAAACCGTTACGTGGCT...GTGCACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317133.9
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp ACCTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCTCCTTCAGCGACGCCTaGAGAAAGCCCTCCGGGTCC +
Preference number: 4 (lower is better)
Translates to: TCQGPEPTCCSARLPEHSSFSDA*RKPSGS
Trigger: GGACCCGGAGGGCTTTCTGCAGGCGTCGCTGAAGGA...GCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317133.9
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp AGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAAGCCCGTCTGTGCACCTaGCAAGGCCCAGAGCCCACA +
Preference number: 4 (lower is better)
Translates to: RPRAHMLFCTITRTQPLEARLCT*QGPEPT
Trigger: TGTGGGCTCTGGGCCTTGGCAGGTGCACAGACGGGC...TTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp CTTCTAGGGCCACACGGAGCAGAAGCAGCTTCCCACCCAAGCACCTCTGAACTGAGCTCAGCCACGGGATaGCACGCCTGGAGTCTGGAA +
Preference number: 4 (lower is better)
Translates to: LLGPHGAEAASHPSTSELSSATG*HAWSLE
Trigger: TTCCAGACTCCAGGCGTGGCATCCCGTGGCTGAGCT...CAGTTCAGAGGTGCTTGGGTGGGAAGCTGCTTCTGCTCCGTGTGGCCCTAGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544132.2
CDS-3UTR CCA 90 bp CTGGGGACTCGGACAGCAACGCTACCGGCTCCGAGAGGACAGTTAATGTCGCCTCCTCCCAGTTCCGGATaGCTTCCGTCAGGATCTGCA +
Preference number: 4 (lower is better)
Translates to: LGTRTATLPAPRGQLMSPPPSSG*LPSGSA
Trigger: TGCAGATCCTGACGGAAGCCATCCGGAACTGGGAGG...AGGCGACATTAACTGTCCTCTCGGAGCCGGTAGCGTTGCTGTCCGAGTCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp CTGGGGACTCGGACAGCAACGCTACCGGCTCCGAGAGGACAGTTAATGTCGCCTAGCACTGAAGCCTGCTaGCTACGGCCAATGGTGGAG +
Preference number: 4 (lower is better)
Translates to: LGTRTATLPAPRGQLMSPSTEAC*LRPMVE
Trigger: CTCCACCATTGGCCGTAGCCAGCAGGCTTCAGTGCT...AGGCGACATTAACTGTCCTCTCGGAGCCGGTAGCGTTGCTGTCCGAGTCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp GCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGCACCACAGAGCCGTGAGGTaGAGACAAGCTCTGAACACA +
Preference number: 4 (lower is better)
Translates to: AVRWRQALNTRDARPSVHHRAVR*RQALNT
Trigger: TGTGTTCAGAGCTTGTCTCCACCTCACGGCTCTGTG...GTGCACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp ACCTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCTGCCAGGAGCTCCCTaGCAGCTCTGGGCTTGTGAG +
Preference number: 4 (lower is better)
Translates to: TCQGPEPTCCSARLPEHSLPGAP*QLWACE
Trigger: CTCACAAGCCCAGAGCTGCCAGGGAGCTCCTGGCAG...GCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp AGAGCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGGAAACAATGGCCCTCTaGATGCCACATCGCCACTGC +
Preference number: 4 (lower is better)
Translates to: RAVRWRQALNTRDARPSVETMAL*MPHRHC
Trigger: GCAGTGGCGATGTGGCATCCAGAGGGCCATTGTTTC...CACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp AACGAAAACCTGCTCCACGGGCCGGGCTTCCTGCCCAGGACCGCACAGGCTTTCGATGACGTCTCCTTTTaGGAAGGAAAGCTCGTCCTC +
Preference number: 4 (lower is better)
Translates to: NENLLHGPGFLPRTAQAFDDVSF*EGKLVL
Trigger: GAGGACGAGCTTTCCTTCTCAAAAGGAGACGTCATC...GAAAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGTGGAGCAGGTTTTCGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp TTACGAAGAGCACCCTCGGATGTAGGCTCACGTGAACACACCACCTCCCTCCAAGCTTCTCGCTGGCCTTaGCCTCGCGCACGTAGTTGC +
Preference number: 4 (lower is better)
Translates to: LRRAPSDVGSREHTTSLQASRWP*PRARSC
Trigger: GCAACTACGTGCGCGAGGTCAAGGCCAGCGAGAAGC...TTGGAGGGAGGTGGTGTGTTCACGTGAGCCTACATCCGAGGGTGCTCTTCGTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp TCCACCAGGCTTCTGCTTCCGGTGGATGCGGGCATGGGACTTCTTATTCACGTAGCTTCTCGCTGGCCTTaGCCTCGCGCACGTAGTTGC +
Preference number: 4 (lower is better)
Translates to: STRLLLPVDAGMGLLIHVASRWP*PRARSC
Trigger: GCAACTACGTGCGCGAGGTCAAGGCCAGCGAGAAGC...TACGTGAATAAGAAGTCCCATGCCCGCATCCACCGGAAGCAGAAGCCTGGTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp AAAACCTGCTCCACGGGCCGGGCTTCCTGCCCAGGACCGCACAGGCTTTCCAGATTCACTGCAGAAGGGTaGTTGGCACAATACGTGAGG +
Preference number: 4 (lower is better)
Translates to: KTCSTGRASCPGPHRLSRFTAEG*LAQYVR
Trigger: CCTCACGTATTGTGCCAATCACCCTTCTGCAGTGAA...TCTGGAAAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGTGGAGCAGGTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp AGAGCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGCCTCACTGTGTTCCGTaGGGACATTCACTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: RAVRWRQALNTRDARPSVPHCVP*GHSLQK
Trigger: CTTCTGCAGTGAATGTCCTCACGGAACACAGTGAGG...CACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp AACGAAAACCTGCTCCACGGGCCGGGCTTCCTGCCCAGGACCGCACAGGCTTTCGGTTTCCCACAGACGTaGCCTTCGTTTGCTTCTGTA +
Preference number: 4 (lower is better)
Translates to: NENLLHGPGFLPRTAQAFGFPQT*PSFASV
Trigger: TACAGAAGCAAACGAAGGTCACGTCTGTGGGAAACC...GAAAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGTGGAGCAGGTTTTCGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp GCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGCACGGTATGAGATGGCACTaGATGAGGCTTTATGGTGGG +
Preference number: 4 (lower is better)
Translates to: AVRWRQALNTRDARPSVHGMRWH*MRLYGG
Trigger: CCCACCATAAAGCCTCATTCAGTGCCATCTCATACC...GTGCACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp AAAACCTGCTCCACGGGCCGGGCTTCCTGCCCAGGACCGCACAGGCTTTCCAGAGGTATGAGATGGCACTaGATGAGGCTTTATGGTGGG +
Preference number: 4 (lower is better)
Translates to: KTCSTGRASCPGPHRLSRGMRWH*MRLYGG
Trigger: CCCACCATAAAGCCTCATTCAGTGCCATCTCATACC...TCTGGAAAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGTGGAGCAGGTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp ACGGTGGAGGCCCTGGTGCTGCGGAACGAACCAGGCATCCACCAGGCTTCTGCTGCCCGCATGAGTGAATaGTCTGCTAAGTTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: TVEALVLRNEPGIHQASAARMSE*SAKLRK
Trigger: CTTCCTCAACTTAGCAGATCATTCACTCATGCGGGC...AGCAGAAGCCTGGTGGATGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCACCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp AGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAAAGCTCTGAACACACGTaGCGCCCGCCCGTCTGTGCA +
Preference number: 4 (lower is better)
Translates to: RPRAHMLFCTITRTQPLESSEHT*RPPVCA
Trigger: TGCACAGACGGGCGGGCGTCACGTGTGTTCAGAGCT...TTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp CCTCTGCACTGGAACACAGTGGGGGAAACGTTCCCTGCTTATGCCTATGTTACTCTGGAGCGAGCCCGCTaGCCCAGATGCCAACCCGCT +
Preference number: 4 (lower is better)
Translates to: PLHWNTVGETFPAYAYVTLERAR*PRCQPA
Trigger: AGCGGGTTGGCATCTGGGGCAGCGGGCTCGCTCCAG...AGTAACATAGGCATAAGCAGGGAACGTTTCCCCCACTGTGTTCCAGTGCAGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000218789.9
ENST00000375736.8
CDS-3UTR GCA 90 bp AGAGCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGAGTCAAAAGACTTTATaGGGTGAGACGAGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: RAVRWRQALNTRDARPSVSQKTL*GETRAG
Trigger: CCCGGCCCTCGTCTCACCGCATAAAGTCTTTTGACT...CACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp ACGGTGGAGGCCCTGGTGCTGCGGAACGAACCAGGCATCCACCAGGCTTCTGCTCGTGAGGACATTCACTaGAGAAGGGTGATTGGCACA +
Preference number: 4 (lower is better)
Translates to: TVEALVLRNEPGIHQASAREDIH*RRVIGT
Trigger: TGTGCCAATCACCCTTCTGCAGTGAATGTCCTCACG...AGCAGAAGCCTGGTGGATGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCACCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp TTTAATGTCATCGCCCTCCCAGTTCCGGATGGCTTCCGTCAGGATCTGCAGCTCCGCGGGCTTGCTGTCTaGGTGCTTGCTGGACGGAGT +
Preference number: 4 (lower is better)
Translates to: FNVIALPVPDGFRQDLQLRGLAV*VLAGRS
Trigger: ACTCCGTCCAGCAAGCACGCAGACAGCAAGCCCGCG...GAGCTGCAGATCCTGACGGAAGCCATCCGGAACTGGGAGGGCGATGACATTAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR GCA 90 bp ACGCCCAGCGCATGTGGACAAGCACAGACGCCACTGAGTGTGAAGGAACGAGCTGACTTGGGTCAGGGGTaGCCAGCTTCACCTCAGAAC +
Preference number: 4 (lower is better)
Translates to: TPSACGQAQTPLSVKERADLGQG*PASPQN
Trigger: GTTCTGAGGTGAAGCTGGGCACCCCTGACCCAAGTC...AGCTCGTTCCTTCACACTCAGTGGCGTCTGTGCTTGTCCACATGCGCTGGGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp CTTTCGGTGAGCACTGAAGCCTGCTGGCTACGGCCAATGGTGGAGGAGACCTCGTGTCAGCCAGCAAGTTaGCCTCAGAAACCCGCAGGT +
Preference number: 4 (lower is better)
Translates to: LSVSTEACWLRPMVEETSCQPAS*PQKPAG
Trigger: ACCTGCGGGTTTCTGAGGGCAACTTGCTGGCTGACA...CGAGGTCTCCTCCACCATTGGCCGTAGCCAGCAGGCTTCAGTGCTCACCGAAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp CTGTGGTCACCCTTATTTATTGCTGAAGCAGAACGAAAACCTGCTCCACGGGCCACGGGCCGGGCTTCCTaGCCAGGACCGCACAGGCTT +
Preference number: 4 (lower is better)
Translates to: LWSPLFIAEAERKPAPRATGRAS*PGPHRL
Trigger: AAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGT...GGCCCGTGGAGCAGGTTTTCGTTCTGCTTCAGCAATAAATAAGGGTGACCACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp ACAGGCTTCGTCTCCTCTGCACTGGAACACAGTGGGGGAAACGTTCCCTGCTTAGGTGAGGCCAGGTTCTaGAGCATGGGGCAGGTCCAC +
Preference number: 4 (lower is better)
Translates to: TGFVSSALEHSGGNVPCLGEARF*SMGQVH
Trigger: GTGGACCTGCCCCATGCTGCAGAACCTGGCCTCACC...TAAGCAGGGAACGTTTCCCCCACTGTGTTCCAGTGCAGAGGAGACGAAGCCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp CGATTACCAGAACACAGCCGTTGGAACTGGGCTCACAGCACCTTTGCTGCATATACGCCCGCCCGTCTGTaGACCTGCCAAGGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: RLPEHSRWNWAHSTFAAYTPARL*TCQGPE
Trigger: CTCTGGGCCTTGGCAGGTGCACAGACGGGCGGGCGT...ATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp GCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGCACCATAAACCCCATCTCTaGCGGAGATTAACACTGGGC +
Preference number: 4 (lower is better)
Translates to: AVRWRQALNTRDARPSVHHKPHL*RRLTLG
Trigger: GCCCAGTGTTAATCTCCGGCAGAGATGGGGTTTATG...GTGCACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp CCTCTGCACTGGAACACAGTGGGGGAAACGTTCCCTGCTTATGCCTATGTTACTCGCGCACGTAGTTGCTaGGGAACCAGCCGGTCCGGC +
Preference number: 4 (lower is better)
Translates to: PLHWNTVGETFPAYAYVTRARSC*GTSRSG
Trigger: GCCGGACCGGCTGGTTCCCCAGCAACTACGTGCGCG...AGTAACATAGGCATAAGCAGGGAACGTTTCCCCCACTGTGTTCCAGTGCAGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp GCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGCACTCAGTGTTCCTGATTTaGGAGACACAGGCTTCTCGC +
Preference number: 4 (lower is better)
Translates to: AVRWRQALNTRDARPSVHSVFLI*ETQASR
Trigger: GCGAGAAGCCTGTGTCTCCCAAATCAGGAACACTGA...GTGCACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp CTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTCAGGCTCCAGGGCTTaGGTGTTTTCGGAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: LPRPRAHMLFCTITRTQPSGSRA*VFSEAP
Trigger: TGGAGCCTCCGAAAACACCCAAGCCCTGGAGCCTGA...CGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp CAGCACGGTGGAGGCCCTGGTGCTGCGGAACGAACCAGGCATCCACCAGGCTTCGTGTTTGCCTTGTTTTaGCGCTGGTGCAGTAAGCTT +
Preference number: 4 (lower is better)
Translates to: QHGGGPGAAERTRHPPGFVFALF*RWCSKL
Trigger: AAGCTTACTGCACCAGCGCCAAAACAAGGCAAACAC...GAAGCCTGGTGGATGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCACCGTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp AGAACCGTAAACAGCAACACAACACTCTCCCAAGGTGCCCAGCTCAAAGGCATCGCTGCCACAGCACGGTaGAGGCCCTGGTGCTGCGGA +
Preference number: 4 (lower is better)
Translates to: RTVNSNTTLSQGAQLKGIAATAR*RPWCCG
Trigger: TCCGCAGCACCAGGGCCTCCACCGTGCTGTGGCAGC...GATGCCTTTGAGCTGGGCACCTTGGGAGAGTGTTGTGTTGCTGTTTACGGTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp CAGCACGGTGGAGGCCCTGGTGCTGCGGAACGAACCAGGCATCCACCAGGCTTCAGAAACCCGCAGGTCTaGGACTGTAATGCTGCTTTA +
Preference number: 4 (lower is better)
Translates to: QHGGGPGAAERTRHPPGFRNPQV*DCNAAL
Trigger: TAAAGCAGCATTACAGTCCCAGACCTGCGGGTTTCT...GAAGCCTGGTGGATGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCACCGTGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp CTTTCGGTGAGCACTGAAGCCTGCTGGCTACGGCCAATGGTGGAGGAGACCTCGTCGTCTCCTCTGCACTaGAACACAGTGGGGGAAACG +
Preference number: 4 (lower is better)
Translates to: LSVSTEACWLRPMVEETSSSPLH*NTVGET
Trigger: CGTTTCCCCCACTGTGTTCCAGTGCAGAGGAGACGA...CGAGGTCTCCTCCACCATTGGCCGTAGCCAGCAGGCTTCAGTGCTCACCGAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp ACAGGCTTCGTCTCCTCTGCACTGGAACACAGTGGGGGAAACGTTCCCTGCTTACCAGGTTCTGCAGCATaGGGCAGGTCCACGCTGAGC +
Preference number: 4 (lower is better)
Translates to: TGFVSSALEHSGGNVPCLPGSAA*GRSTLS
Trigger: GCTCAGCGTGGACCTGCCCCATGCTGCAGAACCTGG...TAAGCAGGGAACGTTTCCCCCACTGTGTTCCAGTGCAGAGGAGACGAAGCCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp CCTCTACTACAGTCCAGTAGTCTACACTTGCAGAGGCTGAATGCTTCAGCTTTCAGCCGGTCCGGCCGTTaGGTGTGCCCTCCCACCAGC +
Preference number: 4 (lower is better)
Translates to: PLLQSSSLHLQRLNASAFSRSGR*VCPPTS
Trigger: GCTGGTGGGAGGGCACACTCAACGGCCGGACCGGCT...GAAAGCTGAAGCATTCAGCCTCTGCAAGTGTAGACTACTGGACTGTAGTAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp AGGGTGATTGGCACAATACGTGAGGTACAGGGTTTTCATCTGTGGCATCAGGTTAGCCGGTCCGGCCGTTaGGTGTGCCCTCCCACCAGC +
Preference number: 4 (lower is better)
Translates to: RVIGTIREVQGFHLWHQVSRSGR*VCPPTS
Trigger: GCTGGTGGGAGGGCACACTCAACGGCCGGACCGGCT...AACCTGATGCCACAGATGAAAACCCTGTACCTCACGTATTGTGCCAATCACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR TCA 90 bp CAGAGTTTTAATGTCATCGCCCTCCCAGTTCCGGATGGCTTCCGTCAGGATCTGGCTTCTCGCTGGCCTTaGCCTCGCGCACGTAGTTGC +
Preference number: 4 (lower is better)
Translates to: QSFNVIALPVPDGFRQDLASRWP*PRARSC
Trigger: GCAACTACGTGCGCGAGGTCAAGGCCAGCGAGAAGC...CAGATCCTGACGGAAGCCATCCGGAACTGGGAGGGCGATGACATTAAAACTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR TCA 90 bp ACGCCCAGCGCATGTGGACAAGCACAGACGCCACTGAGTGTGAAGGAACGAGCTCACCTTTGGTCTCCATaGACTCCCCCAACTCCTCAC +
Preference number: 4 (lower is better)
Translates to: TPSACGQAQTPLSVKERAHLWSP*TPPTPH
Trigger: GTGAGGAGTTGGGGGAGTTCATGGAGACCAAAGGTG...AGCTCGTTCCTTCACACTCAGTGGCGTCTGTGCTTGTCCACATGCGCTGGGCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp GCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGCACCTCTTCCGGACTTCTTaGCATTGGGCTGAAAGGTTT +
Preference number: 4 (lower is better)
Translates to: AVRWRQALNTRDARPSVHLFRTS*HWAERF
Trigger: AAACCTTTCAGCCCAATGTCAAGAAGTCCGGAAGAG...GTGCACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp TATCAAGTTCCCACCCCCTTGGGAGGTCACACGGTGAAACAGACACAGTTATATGCTTGCTGGACGGAGTaGCCGGGTGGGAGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: YQVPTPLGGHTVKQTQLYACWTE*PGGRGG
Trigger: CCCTCCCCTCCCACCCGGTCACTCCGTCCAGCAAGC...ATATAACTGTGTCTGTTTCACCGTGTGACCTCCCAAGGGGGTGGGAACTTGATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp AGAACACAGCCGTTGGAACTGGGCTCACAGCACCTTTGCTGCATATATTCTTCTGCTTGCTGGACGGAGTaGCCGGGTGGGAGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: RTQPLELGSQHLCCIYSSACWTE*PGGRGG
Trigger: CCCTCCCCTCCCACCCGGTCACTCCGTCCAGCAAGC...AGAAGAATATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp AACGAAAACCTGCTCCACGGGCCGGGCTTCCTGCCCAGGACCGCACAGGCTTTCCGCAGCAAACTCATCTaGGAATCACAGTACTCAGAC +
Preference number: 4 (lower is better)
Translates to: NENLLHGPGFLPRTAQAFRSKLI*ESQYSD
Trigger: GTCTGAGTACTGTGATTCTCAGATGAGTTTGCTGCG...GAAAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGTGGAGCAGGTTTTCGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp AAAACCTGCTCCACGGGCCGGGCTTCCTGCCCAGGACCGCACAGGCTTTCCAGACTCATCCATACAAGGTaGGAGCAAAGGAGTAACCCT +
Preference number: 4 (lower is better)
Translates to: KTCSTGRASCPGPHRLSRLIHTR*EQRSNP
Trigger: AGGGTTACTCCTTTGCTCTCACCTTGTATGGATGAG...TCTGGAAAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGTGGAGCAGGTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp AGAGCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGTGGCCCCTCAAGCAATaGCTAGGTGTGGATTTGATG +
Preference number: 4 (lower is better)
Translates to: RAVRWRQALNTRDARPSVWPLKQ*LGVDLM
Trigger: CATCAAATCCACACCTAGTCATTGCTTGAGGGGCCA...CACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp TTACGAAGAGCACCCTCGGATGTAGGCTCACGTGAACACACCACCTCCCTCCAAGGTCTACACAGCCCATaGCACAGGCAACCCACGCCT +
Preference number: 4 (lower is better)
Translates to: LRRAPSDVGSREHTTSLQGLHSP*HRQPTP
Trigger: AGGCGTGGGTTGCCTGTGTCATGGGCTGTGTAGACC...TTGGAGGGAGGTGGTGTGTTCACGTGAGCCTACATCCGAGGGTGCTCTTCGTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp GCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGCACTTTGCAAAGGCCTGGTaGTGGCTTAAACCTACCTTC +
Preference number: 4 (lower is better)
Translates to: AVRWRQALNTRDARPSVHFAKAW*WLKPTF
Trigger: GAAGGTAGGTTTAAGCCATCACCAGGCCTTTGCAAA...GTGCACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp TATCAAGTTCCCACCCCCTTGGGAGGTCACACGGTGAAACAGACACAGTTATATGCCCGCTGCCCCAGATaGCAACCCGCTCAGCCGCTG +
Preference number: 4 (lower is better)
Translates to: YQVPTPLGGHTVKQTQLYARCPR*QPAQPL
Trigger: CAGCGGCTGAGCGGGTTGGCATCTGGGGCAGCGGGC...ATATAACTGTGTCTGTTTCACCGTGTGACCTCCCAAGGGGGTGGGAACTTGATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000218789.9
CDS-3UTR GCA 90 bp GCGGCAGTGCCGTATGGGCCTTCCTTGAGGTCAAGACTGAGTCTGTCAGCCAGCAGTCAAAAGACTTTATaGGGTGAGACGAGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: AAVPYGPSLRSRLSLSASSQKTL*GETRAG
Trigger: CCCGGCCCTCGTCTCACCGCATAAAGTCTTTTGACT...GCTGGCTGACAGACTCAGTCTTGACCTCAAGGAAGGCCCATACGGCACTGCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp CTGGGGACTCGGACAGCAACGCTACCGGCTCCGAGAGGACAGTTAATGTCGCCTAGTCAAAAGACTTTATaGGGTGAGACGAGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: LGTRTATLPAPRGQLMSPSQKTL*GETRAG
Trigger: CCCGGCCCTCGTCTCACCGCATAAAGTCTTTTGACT...AGGCGACATTAACTGTCCTCTCGGAGCCGGTAGCGTTGCTGTCCGAGTCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp CAGCACGGTGGAGGCCCTGGTGCTGCGGAACGAACCAGGCATCCACCAGGCTTCTTTGAAGTCCGAGTGTaGAAAGACTGTGATCCAAGG +
Preference number: 4 (lower is better)
Translates to: QHGGGPGAAERTRHPPGFFEVRV*KDCDPR
Trigger: CCTTGGATCACAGTCTTTGCACACTCGGACTTCAAA...GAAGCCTGGTGGATGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCACCGTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp AGAACCGTAAACAGCAACACAACACTCTCCCAAGGTGCCCAGCTCAAAGGCATCCCTCGCGCACGTAGTTaGTGGGGAACCAGCCGGTCC +
Preference number: 4 (lower is better)
Translates to: RTVNSNTTLSQGAQLKGIPRARS*WGTSRS
Trigger: GGACCGGCTGGTTCCCCAGCAACTACGTGCGCGAGG...GATGCCTTTGAGCTGGGCACCTTGGGAGAGTGTTGTGTTGCTGTTTACGGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp GCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGCACAACTTCTCACTGGTCTaGAATGGCCGTAGGTACGTT +
Preference number: 4 (lower is better)
Translates to: AVRWRQALNTRDARPSVHNFSLV*NGRRYV
Trigger: AACGTACCTACGGCCATTGCAGACCAGTGAGAAGTT...GTGCACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp ACCTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGAGAATCCCAGGGCTaGTGGCACCTTTGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: TCQGPEPTCCSARLPEHSRESQG*WHLWSP
Trigger: TGGAGACCAAAGGTGCCAGCAGCCCTGGGATTCTCG...GCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp AGAGCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGGTTTGCTTCTGTAGGTaGTCCACCCATTCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: RAVRWRQALNTRDARPSVVCFCR*STHSCR
Trigger: TCTGCAGGAATGGGTGGAGCACCTACAGAAGCAAAC...CACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp GCGGCAGTGCCGTATGGGCCTTCCTTGAGGTCAAGACTGAGTCTGTCAGCCAGCGACGTGACCTTCGTTTaGTTCTGTAGGTGCTCCACC +
Preference number: 4 (lower is better)
Translates to: AAVPYGPSLRSRLSLSASDVTFV*FCRCST
Trigger: GGTGGAGCACCTACAGAAGCAAACGAAGGTCACGTC...GCTGGCTGACAGACTCAGTCTTGACCTCAAGGAAGGCCCATACGGCACTGCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp TTACGAAGAGCACCCTCGGATGTAGGCTCACGTGAACACACCACCTCCCTCCAAGGCTTGCTGTCTGCGTaGTTGCTGGACGGAGTGACC +
Preference number: 4 (lower is better)
Translates to: LRRAPSDVGSREHTTSLQGLLSA*LLDGVT
Trigger: GGTCACTCCGTCCAGCAAGCACGCAGACAGCAAGCC...TTGGAGGGAGGTGGTGTGTTCACGTGAGCCTACATCCGAGGGTGCTCTTCGTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp CTGTGGTCACCCTTATTTATTGCTGAAGCAGAACGAAAACCTGCTCCACGGGCCTCAGCGGCGCGGGCTTaGTGTCTGCGTGCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: LWSPLFIAEAERKPAPRASAARA*CLRACW
Trigger: CCAGCAAGCACGCAGACAGCAAGCCCGCGCCGCTGA...GGCCCGTGGAGCAGGTTTTCGTTCTGCTTCAGCAATAAATAAGGGTGACCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp CATCTGAGCCATGACAGTAAGCTCTGCCTTTGGAAAGGAGAGCTCCCACTTCACTCAGCGGCGCGGGCTTaGTGTCTGCGTGCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: HLSHDSKLCLWKGELPLHSAARA*CLRACW
Trigger: CCAGCAAGCACGCAGACAGCAAGCCCGCGCCGCTGA...GTGAAGTGGGAGCTCTCCTTTCCAAAGGCAGAGCTTACTGTCATGGCTCAGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp CTGGGGACTCGGACAGCAACGCTACCGGCTCCGAGAGGACAGTTAATGTCGCCTGCTTCCGTTCAGGTTTaGGCTTGGGCAGCAGCTTTT +
Preference number: 4 (lower is better)
Translates to: LGTRTATLPAPRGQLMSPASVQV*AWAAAF
Trigger: AAAAGCTGCTGCCCAAGCGCAAACCTGAACGGAAGC...AGGCGACATTAACTGTCCTCTCGGAGCCGGTAGCGTTGCTGTCCGAGTCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp CCTCTGCACTGGAACACAGTGGGGGAAACGTTCCCTGCTTATGCCTATGTTACTCGGTGGAGGCCCTGGTaGTGCGGAACGAACCAGGCA +
Preference number: 4 (lower is better)
Translates to: PLHWNTVGETFPAYAYVTRWRPW*CGTNQA
Trigger: TGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCACCG...AGTAACATAGGCATAAGCAGGGAACGTTTCCCCCACTGTGTTCCAGTGCAGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp CTGGGGACTCGGACAGCAACGCTACCGGCTCCGAGAGGACAGTTAATGTCGCCTCCATCAGTATCAGCCTaGAGCATGGCCTCCATCTGT +
Preference number: 4 (lower is better)
Translates to: LGTRTATLPAPRGQLMSPPSVSA*SMASIC
Trigger: ACAGATGGAGGCCATGCTGCAGGCTGATACTGATGG...AGGCGACATTAACTGTCCTCTCGGAGCCGGTAGCGTTGCTGTCCGAGTCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp CATCTGAGCCATGACAGTAAGCTCTGCCTTTGGAAAGGAGAGCTCCCACTTCACGGCGCTCCAGCAGCCTaGAGAGGACCACCCCATCCT +
Preference number: 4 (lower is better)
Translates to: HLSHDSKLCLWKGELPLHGAPAA*RGPPHP
Trigger: AGGATGGGGTGGTCCTCTGCAGGCTGCTGGAGCGCC...GTGAAGTGGGAGCTCTCCTTTCCAAAGGCAGAGCTTACTGTCATGGCTCAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317133.9
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp AGAGCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGGCCCACATGCTGTTCTaGACGATTACCAGAACACAG +
Preference number: 4 (lower is better)
Translates to: RAVRWRQALNTRDARPSVAHMLF*TITRTQ
Trigger: CTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGC...CACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp AAAGTAGAAACAATGGCCCTCTGGATGCCACATCGCCACTGCCACAGGAGAACTGCCCGTCTGTGCACCTaGCAAGGCCCAGAGCCCACA +
Preference number: 4 (lower is better)
Translates to: KVETMALWMPHRHCHRRTARLCT*QGPEPT
Trigger: TGTGGGCTCTGGGCCTTGGCAGGTGCACAGACGGGC...AGTTCTCCTGTGGCAGTGGCGATGTGGCATCCAGAGGGCCATTGTTTCTACTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp GCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGCACCATGACAGTAAGCTCTaGCTTTGGAAAGGAGAGCTC +
Preference number: 4 (lower is better)
Translates to: AVRWRQALNTRDARPSVHHDSKL*LWKGEL
Trigger: GAGCTCTCCTTTCCAAAGGCAGAGCTTACTGTCATG...GTGCACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp GCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGCACTTTGGAATTAACAGCTaGCCTGATGTCTCCTGTGCC +
Preference number: 4 (lower is better)
Translates to: AVRWRQALNTRDARPSVHFGINS*PDVSCA
Trigger: GGCACAGGAGACATCAGGGCAGCTGTTAATTCCAAA...GTGCACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp TGTGGTAGGCGGGCGTCAGCGGCGCGGGCTTGCTGTCTGCGTGCTTGCTGGACGCTACCAGTTGATTGTTaGTATTATCGGTCATGTCCT +
Preference number: 4 (lower is better)
Translates to: CGRRASAARACCLRACWTLPVDC*YYRSCP
Trigger: AGGACATGACCGATAATAGCAACAATCAACTGGTAG...CGTCCAGCAAGCACGCAGACAGCAAGCCCGCGCCGCTGACGCCCGCCTACCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR CCA 90 bp AGAGCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGTCCACACGGGTGACATaGATGACGTCTCCTTTTGAG +
Preference number: 4 (lower is better)
Translates to: RAVRWRQALNTRDARPSVSTRVT*MTSPFE
Trigger: CTCAAAAGGAGACGTCATCCATGTCACCCGTGTGGA...CACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp TGTGGTCCTGAGTGCACCCCGACTTGGGTCAGGGGTGCCCAGCTTCACCTCAGATCAGTGTTCCTGATTTaGGAGACACAGGCTTCTCGC +
Preference number: 4 (lower is better)
Translates to: CGPECTPTWVRGAQLHLRSVFLI*ETQASR
Trigger: GCGAGAAGCCTGTGTCTCCCAAATCAGGAACACTGA...TCTGAGGTGAAGCTGGGCACCCCTGACCCAAGTCGGGGTGCACTCAGGACCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp ATCGCCCTCCCAGTTCCGGATGGCTTCCGTCAGGATCTGCAGCTCAAGCTCTTTCCTCCCAGTTCCGGATaGCTTCCGTCAGGATCTGCA +
Preference number: 4 (lower is better)
Translates to: IALPVPDGFRQDLQLKLFPPSSG*LPSGSA
Trigger: TGCAGATCCTGACGGAAGCCATCCGGAACTGGGAGG...AAAGAGCTTGAGCTGCAGATCCTGACGGAAGCCATCCGGAACTGGGAGGGCGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR CCA 90 bp GCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGCACGTGTTTGCCTTGTTTTaGCGCTGGTGCAGTAAGCTT +
Preference number: 4 (lower is better)
Translates to: AVRWRQALNTRDARPSVHVFALF*RWCSKL
Trigger: AAGCTTACTGCACCAGCGCCAAAACAAGGCAAACAC...GTGCACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp CCTCTGCACTGGAACACAGTGGGGGAAACGTTCCCTGCTTATGCCTATGTTACTGCACGGTGGAGGCCCTaGTGCTGCGGAACGAACCAG +
Preference number: 4 (lower is better)
Translates to: PLHWNTVGETFPAYAYVTARWRP*CCGTNQ
Trigger: CTGGTTCGTTCCGCAGCACCAGGGCCTCCACCGTGC...AGTAACATAGGCATAAGCAGGGAACGTTTCCCCCACTGTGTTCCAGTGCAGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp AACGAAAACCTGCTCCACGGGCCGGGCTTCCTGCCCAGGACCGCACAGGCTTTCAGAAACCCGCAGGTCTaGGACTGTAATGCTGCTTTA +
Preference number: 4 (lower is better)
Translates to: NENLLHGPGFLPRTAQAFRNPQV*DCNAAL
Trigger: TAAAGCAGCATTACAGTCCCAGACCTGCGGGTTTCT...GAAAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGTGGAGCAGGTTTTCGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp CTGGGGACTCGGACAGCAACGCTACCGGCTCCGAGAGGACAGTTAATGTCGCCTTGCACTGGAACACAGTaGGGGAAACGTTCCCTGCTT +
Preference number: 4 (lower is better)
Translates to: LGTRTATLPAPRGQLMSPCTGTQ*GKRSLL
Trigger: AAGCAGGGAACGTTTCCCCCACTGTGTTCCAGTGCA...AGGCGACATTAACTGTCCTCTCGGAGCCGGTAGCGTTGCTGTCCGAGTCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp AGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAAGGTAGACTTTCTCGATaGTCCCGGGGAGCAGGCGCT +
Preference number: 4 (lower is better)
Translates to: RPRAHMLFCTITRTQPLEGRLSR*SRGAGA
Trigger: AGCGCCTGCTCCCCGGGACCATCGAGAAAGTCTACC...TTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317133.9
ENST00000375741.6
CDS-3UTR CCA 90 bp AGAGCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGCCAGAGTCTCCTCCATaGTTCTGGCACTTAGATCAC +
Preference number: 4 (lower is better)
Translates to: RAVRWRQALNTRDARPSVPESPP*FWHLDH
Trigger: GTGATCTAAGTGCCAGAACCATGGAGGAGACTCTGG...CACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp CTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGCACAGCCGTTGGAACTaGGCTCACAGCACCTTTGCT +
Preference number: 4 (lower is better)
Translates to: LPRPRAHMLFCTITRTQPHSRWN*AHSTFA
Trigger: AGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTG...CGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp GCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGCACAGTAAGCTCTGCCTTTaGAAAGGAGAGCTCCCACTT +
Preference number: 4 (lower is better)
Translates to: AVRWRQALNTRDARPSVHSKLCL*KGELPL
Trigger: AAGTGGGAGCTCTCCTTTCCAAAGGCAGAGCTTACT...GTGCACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp GCAGAAGCAGCTTCCCACCCAAGCACCTCTGAACTGTGCGTGAGGAGGCACAATACGGGATGCCACGCCTaGAGTCTGGAAGGAGGAGAA +
Preference number: 4 (lower is better)
Translates to: AEAASHPSTSELCVRRHNTGCHA*SLEGGE
Trigger: TTCTCCTCCTTCCAGACTCCAGGCGTGGCATCCCGT...ATTGTGCCTCCTCACGCACAGTTCAGAGGTGCTTGGGTGGGAAGCTGCTTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544132.2
CDS-3UTR TCA 90 bp GCGGGCATGGGACTTCTTATTCACGTAGCTGGAAAGGACATTCTAGCATGGGGAGCTTCTCGCTGGCCTTaGCCTCGCGCACGTAGTTGC +
Preference number: 4 (lower is better)
Translates to: AGMGLLIHVAGKDILAWGASRWP*PRARSC
Trigger: GCAACTACGTGCGCGAGGTCAAGGCCAGCGAGAAGC...TCCCCATGCTAGAATGTCCTTTCCAGCTACGTGAATAAGAAGTCCCATGCCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp ACGCCCAGCGCATGTGGACAAGCACAGACGCCACTGAGTGTGAAGGAACGAGCTCCTCACTGTGTTCCGTaGGGACATTCACTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: TPSACGQAQTPLSVKERAPHCVP*GHSLQK
Trigger: CTTCTGCAGTGAATGTCCTCACGGAACACAGTGAGG...AGCTCGTTCCTTCACACTCAGTGGCGTCTGTGCTTGTCCACATGCGCTGGGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp GCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGCACTTCTTGACATTGGGCTaGAAGGTTTTTGAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: AVRWRQALNTRDARPSVHFLTLG*KVFEGS
Trigger: GCTGCCTTCAAAAACCTTTCAGCCCAATGTCAAGAA...GTGCACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp AAAACCTGCTCCACGGGCCGGGCTTCCTGCCCAGGACCGCACAGGCTTTCCAGAAGTGCCTTGCCATGTTaGATTGAGTGTTTGCCTTGT +
Preference number: 4 (lower is better)
Translates to: KTCSTGRASCPGPHRLSRSALPC*IECLPC
Trigger: ACAAGGCAAACACTCAATTCAACATGGCAAGGCACT...TCTGGAAAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGTGGAGCAGGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000218789.9
CDS-3UTR TCA 90 bp CTTTCGGTGAGCACTGAAGCCTGCTGGCTACGGCCAATGGTGGAGGAGACCTCGGTTCACAGAGTGGATTaGTGTAGCTCAGGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: LSVSTEACWLRPMVEETSVHRVD*CSSGPQ
Trigger: CTGAGGACCTGAGCTACATCAATCCACTCTGTGAAC...CGAGGTCTCCTCCACCATTGGCCGTAGCCAGCAGGCTTCAGTGCTCACCGAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp CAGCACGGTGGAGGCCCTGGTGCTGCGGAACGAACCAGGCATCCACCAGGCTTCACCCTTATTTATTGCTaGAGCAGAACGAAAACCTGC +
Preference number: 4 (lower is better)
Translates to: QHGGGPGAAERTRHPPGFTLIYC*SRTKTC
Trigger: GCAGGTTTTCGTTCTGCTTCAGCAATAAATAAGGGT...GAAGCCTGGTGGATGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCACCGTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp GCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGCACCTGGTGAGAGATATATaGGCAACAGCTCTTACGAGA +
Preference number: 4 (lower is better)
Translates to: AVRWRQALNTRDARPSVHLVRDI*ATALTR
Trigger: TCTCGTAAGAGCTGTTGCTCATATATCTCTCACCAG...GTGCACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp CGATTACCAGAACACAGCCGTTGGAACTGGGCTCACAGCACCTTTGCTGCATATGGTGGAGACAAGCTCTaGACACACGTGACGCCCGCC +
Preference number: 4 (lower is better)
Translates to: RLPEHSRWNWAHSTFAAYGGDKL*THVTPA
Trigger: GGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACC...ATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp AGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAAGTGGTTACCAGATGCTaGGGAGGCTGGGAAGGAGGA +
Preference number: 4 (lower is better)
Translates to: RPRAHMLFCTITRTQPLEVVTRC*GGWEGG
Trigger: TCCTCCTTCCCAGCCTCCTCAGCATCTGGTAACCAC...TTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375741.6
CDS-3UTR GCA 90 bp CTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGAGTCAAAAGACTTTATaGGGTGAGACGAGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: LPRPRAHMLFCTITRTQPSQKTL*GETRAG
Trigger: CCCGGCCCTCGTCTCACCGCATAAAGTCTTTTGACT...CGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp GCGTGTGGTAGGCGGGCGTCAGCGGCGCGGGCTTGCTGTCTGCGTGCTTGCTGGCTGGAAGTTAAACTTTaGTCTTACTACCAGTTGATT +
Preference number: 4 (lower is better)
Translates to: ACGRRASAARACCLRACWLEVKL*SYYQLI
Trigger: AATCAACTGGTAGTAAGAGCAAAGTTTAACTTCCAG...CCAGCAAGCACGCAGACAGCAAGCCCGCGCCGCTGACGCCCGCCTACCACACGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR GCA 90 bp CAGCACGGTGGAGGCCCTGGTGCTGCGGAACGAACCAGGCATCCACCAGGCTTCTCGTCCTCATTGGTCTaGTGGAAGTTAAACTTTGCT +
Preference number: 4 (lower is better)
Translates to: QHGGGPGAAERTRHPPGFSSSLV*WKLNFA
Trigger: AGCAAAGTTTAACTTCCAGCAGACCAATGAGGACGA...GAAGCCTGGTGGATGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCACCGTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp CATCTGAGAATCACAGTACTCAGACAGCGGACAAGAGCAAACACCTCTAGGTGGCCTCGCGCACGTAGTTaGTGGGGAACCAGCCGGTCC +
Preference number: 4 (lower is better)
Translates to: HLRITVLRQRTRANTSRWPRARS*WGTSRS
Trigger: GGACCGGCTGGTTCCCCAGCAACTACGTGCGCGAGG...CCACCTAGAGGTGTTTGCTCTTGTCCGCTGTCTGAGTACTGTGATTCTCAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp AGAGCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGAACTTCTCACTGGTCTaGAATGGCCGTAGGTACGTT +
Preference number: 4 (lower is better)
Translates to: RAVRWRQALNTRDARPSVNFSLV*NGRRYV
Trigger: AACGTACCTACGGCCATTGCAGACCAGTGAGAAGTT...CACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp TCCACCAGGCTTCTGCTTCCGGTGGATGCGGGCATGGGACTTCTTATTCACGTACGAGAATCCCAGGGCTaGTGGCACCTTTGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: STRLLLPVDAGMGLLIHVRESQG*WHLWSP
Trigger: TGGAGACCAAAGGTGCCAGCAGCCCTGGGATTCTCG...TACGTGAATAAGAAGTCCCATGCCCGCATCCACCGGAAGCAGAAGCCTGGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp ACGCCCAGCGCATGTGGACAAGCACAGACGCCACTGAGTGTGAAGGAACGAGCTGCTTCCGTCAGGATCTaGAGCTCAAGCTCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: TPSACGQAQTPLSVKERAASVRI*SSSSFL
Trigger: GAGGAAAGAGCTTGAGCTGCAGATCCTGACGGAAGC...AGCTCGTTCCTTCACACTCAGTGGCGTCTGTGCTTGTCCACATGCGCTGGGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp CTGGGGACTCGGACAGCAACGCTACCGGCTCCGAGAGGACAGTTAATGTCGCCTGTTTGCTTCTGTAGGTaGTCCACCCATTCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: LGTRTATLPAPRGQLMSPVCFCR*STHSCR
Trigger: TCTGCAGGAATGGGTGGAGCACCTACAGAAGCAAAC...AGGCGACATTAACTGTCCTCTCGGAGCCGGTAGCGTTGCTGTCCGAGTCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp GTGGGGAAGAAAGAAATCACGGCCACCTGGAATTACAGCCACCCTGAAGAAGGACGCGGGCTTGCTGTCTaGGTGCTTGCTGGACGGAGT +
Preference number: 4 (lower is better)
Translates to: VGKKEITATWNYSHPEEGRGLAV*VLAGRS
Trigger: ACTCCGTCCAGCAAGCACGCAGACAGCAAGCCCGCG...TCCTTCTTCAGGGTGGCTGTAATTCCAGGTGGCCGTGATTTCTTTCTTCCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp GCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGCACGTTGAATTGAGTGTTTaGCTTGTTTTGGCGCTGGTG +
Preference number: 4 (lower is better)
Translates to: AVRWRQALNTRDARPSVHVELSV*LVLALV
Trigger: CACCAGCGCCAAAACAAGGCAAACACTCAATTCAAC...GTGCACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp CAGCACGGTGGAGGCCCTGGTGCTGCGGAACGAACCAGGCATCCACCAGGCTTCATCAGGTCAGTGCCTTaGCATGTTGAATTGAGTGTT +
Preference number: 4 (lower is better)
Translates to: QHGGGPGAAERTRHPPGFIRSVP*HVELSV
Trigger: AACACTCAATTCAACATGGCAAGGCACTGACCTGAT...GAAGCCTGGTGGATGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCACCGTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000218789.9
CDS-3UTR GCA 90 bp ACGCCCAGCGCATGTGGACAAGCACAGACGCCACTGAGTGTGAAGGAACGAGCTTCTGCTTCCGGTGGATaGGGGCATGGGACTTCTTAT +
Preference number: 4 (lower is better)
Translates to: TPSACGQAQTPLSVKERASASGG*GHGTSY
Trigger: ATAAGAAGTCCCATGCCCGCATCCACCGGAAGCAGA...AGCTCGTTCCTTCACACTCAGTGGCGTCTGTGCTTGTCCACATGCGCTGGGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp CCTCTGCACTGGAACACAGTGGGGGAAACGTTCCCTGCTTATGCCTATGTTACTTGGAGGCCCTGGTGCTaGGGAACGAACCAGGCATCC +
Preference number: 4 (lower is better)
Translates to: PLHWNTVGETFPAYAYVTWRPWC*GTNQAS
Trigger: GGATGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCA...AGTAACATAGGCATAAGCAGGGAACGTTTCCCCCACTGTGTTCCAGTGCAGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp ACGGTGGAGGCCCTGGTGCTGCGGAACGAACCAGGCATCCACCAGGCTTCTGCTGGGGGAAACGTTCCCTaGTTATGCCTATGTTACTTA +
Preference number: 4 (lower is better)
Translates to: TVEALVLRNEPGIHQASAGGNVP*LCLCYL
Trigger: TAAGTAACATAGGCATAAGCAGGGAACGTTTCCCCC...AGCAGAAGCCTGGTGGATGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCACCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp CCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAACTGGGCTCACCAATGGCCCTCTGGATaGCACATCGCCACTGCCACA +
Preference number: 4 (lower is better)
Translates to: PTCCSARLPEHSRWNWAHQWPSG*HIATAT
Trigger: TGTGGCAGTGGCGATGTGGCATCCAGAGGGCCATTG...GTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp TTTAATGTCATCGCCCTCCCAGTTCCGGATGGCTTCCGTCAGGATCTGCAGCTCGTCTGCTGGCAGGCATaGCTTTCAACCCTGCAGGCA +
Preference number: 4 (lower is better)
Translates to: FNVIALPVPDGFRQDLQLVCWQA*LSTLQA
Trigger: TGCCTGCAGGGTTGAAAGGCATGCCTGCCAGCAGAC...GAGCTGCAGATCCTGACGGAAGCCATCCGGAACTGGGAGGGCGATGACATTAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR CCA 90 bp CTGGGGACTCGGACAGCAACGCTACCGGCTCCGAGAGGACAGTTAATGTCGCCTTCCACACGGGTGACATaGATGACGTCTCCTTTTGAG +
Preference number: 4 (lower is better)
Translates to: LGTRTATLPAPRGQLMSPSTRVT*MTSPFE
Trigger: CTCAAAAGGAGACGTCATCCATGTCACCCGTGTGGA...AGGCGACATTAACTGTCCTCTCGGAGCCGGTAGCGTTGCTGTCCGAGTCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp AAAACCTGCTCCACGGGCCGGGCTTCCTGCCCAGGACCGCACAGGCTTTCCAGATCGTATCAAATCCTTTaGGAGGGCTCTTCAGTGTTC +
Preference number: 4 (lower is better)
Translates to: KTCSTGRASCPGPHRLSRSYQIL*EGSSVF
Trigger: GAACACTGAAGAGCCCTCCCAAAGGATTTGATACGA...TCTGGAAAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGTGGAGCAGGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp AACGAAAACCTGCTCCACGGGCCGGGCTTCCTGCCCAGGACCGCACAGGCTTTCGAGCTTCGGGCAACTTaGTGCATTCTTCTAAAGACT +
Preference number: 4 (lower is better)
Translates to: NENLLHGPGFLPRTAQAFELRAT*CILLKT
Trigger: AGTCTTTAGAAGAATGCACCAAGTTGCCCGAAGCTC...GAAAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGTGGAGCAGGTTTTCGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp GCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGCACGAGCTTCGGGCAACTTaGTGCATTCTTCTAAAGACT +
Preference number: 4 (lower is better)
Translates to: AVRWRQALNTRDARPSVHELRAT*CILLKT
Trigger: AGTCTTTAGAAGAATGCACCAAGTTGCCCGAAGCTC...GTGCACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp TTACGAAGAGCACCCTCGGATGTAGGCTCACGTGAACACACCACCTCCCTCCAAGTTTGCTCAGGCCCGTaGTCAGCACGAGAATCCCAG +
Preference number: 4 (lower is better)
Translates to: LRRAPSDVGSREHTTSLQVCSGP*SARESQ
Trigger: CTGGGATTCTCGTGCTGACCACGGGCCTGAGCAAAC...TTGGAGGGAGGTGGTGTGTTCACGTGAGCCTACATCCGAGGGTGCTCTTCGTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp AGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAAGTTTGCTCAGGCCCGTaGTCAGCACGAGAATCCCAG +
Preference number: 4 (lower is better)
Translates to: RPRAHMLFCTITRTQPLEVCSGP*SARESQ
Trigger: CTGGGATTCTCGTGCTGACCACGGGCCTGAGCAAAC...TTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp TTACGAAGAGCACCCTCGGATGTAGGCTCACGTGAACACACCACCTCCCTCCAACCTCCCAGTTCCGGATaGCTTCCGTCAGGATCTGCA +
Preference number: 4 (lower is better)
Translates to: LRRAPSDVGSREHTTSLQPPSSG*LPSGSA
Trigger: TGCAGATCCTGACGGAAGCCATCCGGAACTGGGAGG...TTGGAGGGAGGTGGTGTGTTCACGTGAGCCTACATCCGAGGGTGCTCTTCGTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp AGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAACCTCCCAGTTCCGGATaGCTTCCGTCAGGATCTGCA +
Preference number: 4 (lower is better)
Translates to: RPRAHMLFCTITRTQPLEPPSSG*LPSGSA
Trigger: TGCAGATCCTGACGGAAGCCATCCGGAACTGGGAGG...TTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp GCGGCAGTGCCGTATGGGCCTTCCTTGAGGTCAAGACTGAGTCTGTCAGCCAGCCTGAATGAGGCTTTATaGTGGGGTTTCCCACAGACG +
Preference number: 4 (lower is better)
Translates to: AAVPYGPSLRSRLSLSASLNEAL*WGFPQT
Trigger: CGTCTGTGGGAAACCCCACCATAAAGCCTCATTCAG...GCTGGCTGACAGACTCAGTCTTGACCTCAAGGAAGGCCCATACGGCACTGCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp CTGGGGACTCGGACAGCAACGCTACCGGCTCCGAGAGGACAGTTAATGTCGCCTGAGTCTAGGCTTGGTTaGTCATCATCAGCCAAGACG +
Preference number: 4 (lower is better)
Translates to: LGTRTATLPAPRGQLMSPESRLG*SSSAKT
Trigger: CGTCTTGGCTGATGATGACCAACCAAGCCTAGACTC...AGGCGACATTAACTGTCCTCTCGGAGCCGGTAGCGTTGCTGTCCGAGTCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000218789.9
CDS-3UTR CCA 90 bp CCTCTGCACTGGAACACAGTGGGGGAAACGTTCCCTGCTTATGCCTATGTTACTGAGTGCACCCCGACTTaGGTCAGGGGTGCCCAGCTT +
Preference number: 4 (lower is better)
Translates to: PLHWNTVGETFPAYAYVTECTPT*VRGAQL
Trigger: AAGCTGGGCACCCCTGACCCAAGTCGGGGTGCACTC...AGTAACATAGGCATAAGCAGGGAACGTTTCCCCCACTGTGTTCCAGTGCAGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp AACGAAAACCTGCTCCACGGGCCGGGCTTCCTGCCCAGGACCGCACAGGCTTTCGAGATGTTCACAGAGTaGATTGATGTAGCTCAGGTC +
Preference number: 4 (lower is better)
Translates to: NENLLHGPGFLPRTAQAFEMFTE*IDVAQV
Trigger: GACCTGAGCTACATCAATCCACTCTGTGAACATCTC...GAAAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGTGGAGCAGGTTTTCGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp CATCTGAGAATCACAGTACTCAGACAGCGGACAAGAGCAAACACCTCTAGGTGGGCACGGTGGAGGCCCTaGTGCTGCGGAACGAACCAG +
Preference number: 4 (lower is better)
Translates to: HLRITVLRQRTRANTSRWARWRP*CCGTNQ
Trigger: CTGGTTCGTTCCGCAGCACCAGGGCCTCCACCGTGC...CCACCTAGAGGTGTTTGCTCTTGTCCGCTGTCTGAGTACTGTGATTCTCAGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp TCCACCAGGCTTCTGCTTCCGGTGGATGCGGGCATGGGACTTCTTATTCACGTATGCGGCAGTGCCGTATaGGCCTTCCTTGAGGTCAAG +
Preference number: 4 (lower is better)
Translates to: STRLLLPVDAGMGLLIHVCGSAV*AFLEVK
Trigger: CTTGACCTCAAGGAAGGCCCATACGGCACTGCCGCA...TACGTGAATAAGAAGTCCCATGCCCGCATCCACCGGAAGCAGAAGCCTGGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp TCCACCAGGCTTCTGCTTCCGGTGGATGCGGGCATGGGACTTCTTATTCACGTAAGCACTGAAGCCTGCTaGCTACGGCCAATGGTGGAG +
Preference number: 4 (lower is better)
Translates to: STRLLLPVDAGMGLLIHVSTEAC*LRPMVE
Trigger: CTCCACCATTGGCCGTAGCCAGCAGGCTTCAGTGCT...TACGTGAATAAGAAGTCCCATGCCCGCATCCACCGGAAGCAGAAGCCTGGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp CTGTGGTCACCCTTATTTATTGCTGAAGCAGAACGAAAACCTGCTCCACGGGCCCCAGGTTCTGCAGCATaGGGCAGGTCCACGCTGAGC +
Preference number: 4 (lower is better)
Translates to: LWSPLFIAEAERKPAPRAPGSAA*GRSTLS
Trigger: GCTCAGCGTGGACCTGCCCCATGCTGCAGAACCTGG...GGCCCGTGGAGCAGGTTTTCGTTCTGCTTCAGCAATAAATAAGGGTGACCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp ACGGTGGAGGCCCTGGTGCTGCGGAACGAACCAGGCATCCACCAGGCTTCTGCTAGCCGAGGAAGATACTaGATCCACAGAAAGAAAAGG +
Preference number: 4 (lower is better)
Translates to: TVEALVLRNEPGIHQASASRGRY*IHRKKR
Trigger: CCTTTTCTTTCTGTGGATCCAGTATCTTCCTCGGCT...AGCAGAAGCCTGGTGGATGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCACCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp TTACGAAGAGCACCCTCGGATGTAGGCTCACGTGAACACACCACCTCCCTCCAATATGGATGTCAGGGGTaGGGAGCCGGGGGAACTGAA +
Preference number: 4 (lower is better)
Translates to: LRRAPSDVGSREHTTSLQYGCQG*GAGGTE
Trigger: TTCAGTTCCCCCGGCTCCCCACCCCTGACATCCATA...TTGGAGGGAGGTGGTGTGTTCACGTGAGCCTACATCCGAGGGTGCTCTTCGTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp ACCTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCTGAATACGTGGGTTTaGCGAAGGAGTGGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: TCQGPEPTCCSARLPEHSLNTWV*RRSGQW
Trigger: CCACTGCCCACTCCTTCGCCAAACCCACGTATTCAG...GCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp AAAGTAGAAACAATGGCCCTCTGGATGCCACATCGCCACTGCCACAGGAGAACTGCTCCCTGGCAGCTCTaGGCTTGTGAGCAGCAGGAC +
Preference number: 4 (lower is better)
Translates to: KVETMALWMPHRHCHRRTAPWQL*ACEQQD
Trigger: GTCCTGCTGCTCACAAGCCCAGAGCTGCCAGGGAGC...AGTTCTCCTGTGGCAGTGGCGATGTGGCATCCAGAGGGCCATTGTTTCTACTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp TGTGGTCCTGAGTGCACCCCGACTTGGGTCAGGGGTGCCCAGCTTCACCTCAGAGATTGGCACAATACGTaGGGTACAGGGTTTTCATCT +
Preference number: 4 (lower is better)
Translates to: CGPECTPTWVRGAQLHLRDWHNT*GTGFSS
Trigger: AGATGAAAACCCTGTACCTCACGTATTGTGCCAATC...TCTGAGGTGAAGCTGGGCACCCCTGACCCAAGTCGGGGTGCACTCAGGACCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp AGAGCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGGATTGGCACAATACGTaGGGTACAGGGTTTTCATCT +
Preference number: 4 (lower is better)
Translates to: RAVRWRQALNTRDARPSVDWHNT*GTGFSS
Trigger: AGATGAAAACCCTGTACCTCACGTATTGTGCCAATC...CACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp CTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTCACTGCAGAAGGGTaGTTGGCACAATACGTGAGG +
Preference number: 4 (lower is better)
Translates to: LPRPRAHMLFCTITRTQPFTAEG*LAQYVR
Trigger: CCTCACGTATTGTGCCAATCACCCTTCTGCAGTGAA...CGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp AGAGCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGGGGCTGAAAGGTTTTTaGAGGCAGCCATGGATTTTT +
Preference number: 4 (lower is better)
Translates to: RAVRWRQALNTRDARPSVGLKGF*RQPWIF
Trigger: AAAAATCCATGGCTGCCTTCAAAAACCTTTCAGCCC...CACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp CTGGGGACTCGGACAGCAACGCTACCGGCTCCGAGAGGACAGTTAATGTCGCCTCTCTTCCGGACTTCTTaGCATTGGGCTGAAAGGTTT +
Preference number: 4 (lower is better)
Translates to: LGTRTATLPAPRGQLMSPLFRTS*HWAERF
Trigger: AAACCTTTCAGCCCAATGTCAAGAAGTCCGGAAGAG...AGGCGACATTAACTGTCCTCTCGGAGCCGGTAGCGTTGCTGTCCGAGTCCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp AGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAATCACTTCCGGCACACTaGATCAGGACCTGGGACATG +
Preference number: 4 (lower is better)
Translates to: RPRAHMLFCTITRTQPLESLPAH*IRTWDM
Trigger: CATGTCCCAGGTCCTGATTCAGTGTGCCGGAAGTGA...TTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp AGAGCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGAGTGCCTTGCCATGTTaGATTGAGTGTTTGCCTTGT +
Preference number: 4 (lower is better)
Translates to: RAVRWRQALNTRDARPSVSALPC*IECLPC
Trigger: ACAAGGCAAACACTCAATTCAACATGGCAAGGCACT...CACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp AGAACCGTAAACAGCAACACAACACTCTCCCAAGGTGCCCAGCTCAAAGGCATCACTTTCGGTGAGCACTaGAGCCTGCTGGCTACGGCC +
Preference number: 4 (lower is better)
Translates to: RTVNSNTTLSQGAQLKGITFGEH*SLLATA
Trigger: GGCCGTAGCCAGCAGGCTTCAGTGCTCACCGAAAGT...GATGCCTTTGAGCTGGGCACCTTGGGAGAGTGTTGTGTTGCTGTTTACGGTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp GCGGGCATGGGACTTCTTATTCACGTAGCTGGAAAGGACATTCTAGCATGGGGAACTTTCGGTGAGCACTaGAGCCTGCTGGCTACGGCC +
Preference number: 4 (lower is better)
Translates to: AGMGLLIHVAGKDILAWGTFGEH*SLLATA
Trigger: GGCCGTAGCCAGCAGGCTTCAGTGCTCACCGAAAGT...TCCCCATGCTAGAATGTCCTTTCCAGCTACGTGAATAAGAAGTCCCATGCCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp GCGGCAGTGCCGTATGGGCCTTCCTTGAGGTCAAGACTGAGTCTGTCAGCCAGCGAAGGAACGAGCTTCTaGTGCTACATTCCAACATCG +
Preference number: 4 (lower is better)
Translates to: AAVPYGPSLRSRLSLSASEGTSF*CYIPTS
Trigger: CGATGTTGGAATGTAGCATCAGAAGCTCGTTCCTTC...GCTGGCTGACAGACTCAGTCTTGACCTCAAGGAAGGCCCATACGGCACTGCCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp CAGCACGGTGGAGGCCCTGGTGCTGCGGAACGAACCAGGCATCCACCAGGCTTCAGAGAAGTGAAGAAATaGTTGGCATTAAGGAGTCCA +
Preference number: 4 (lower is better)
Translates to: QHGGGPGAAERTRHPPGFREVKK*LALRSP
Trigger: TGGACTCCTTAATGCCAATCATTTCTTCACTTCTCT...GAAGCCTGGTGGATGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCACCGTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp GCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGCACAATGATGGTTCCATCTaGAGCCATATGGGTCTGAAT +
Preference number: 4 (lower is better)
Translates to: AVRWRQALNTRDARPSVHNDGSI*SHMGLN
Trigger: ATTCAGACCCATATGGCTTCAGATGGAACCATCATT...GTGCACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317133.9
CDS-3UTR TCA 90 bp CTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTGGCCCCTCAAGCAATaGCTAGGTGTGGATTTGATG +
Preference number: 4 (lower is better)
Translates to: LPRPRAHMLFCTITRTQPWPLKQ*LGVDLM
Trigger: CATCAAATCCACACCTAGTCATTGCTTGAGGGGCCA...CGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp AAAACCTGCTCCACGGGCCGGGCTTCCTGCCCAGGACCGCACAGGCTTTCCAGATCGTCCTCATTGGTCTaGTGGAAGTTAAACTTTGCT +
Preference number: 4 (lower is better)
Translates to: KTCSTGRASCPGPHRLSRSSSLV*WKLNFA
Trigger: AGCAAAGTTTAACTTCCAGCAGACCAATGAGGACGA...TCTGGAAAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGTGGAGCAGGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp ACCTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCGCTTCCGTCAGGATCTaGAGCTCAAGCTCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: TCQGPEPTCCSARLPEHSASVRI*SSSSFL
Trigger: GAGGAAAGAGCTTGAGCTGCAGATCCTGACGGAAGC...GCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp CTAGGGCCACACGGAGCAGAAGCAGCTTCCCACCCAAGCACCTCTGAACTGTGCGATCCTGCTGGTTGTTaGACGACACTAATATCCGCT +
Preference number: 4 (lower is better)
Translates to: LGPHGAEAASHPSTSELCDPAGC*TTLISA
Trigger: AGCGGATATTAGTGTCGTGCAACAACCAGCAGGATC...GCACAGTTCAGAGGTGCTTGGGTGGGAAGCTGCTTCTGCTCCGTGTGGCCCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544132.2
CDS-3UTR GCA 90 bp ACCTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCGACGTGACCTTCGTTTaGTTCTGTAGGTGCTCCACC +
Preference number: 4 (lower is better)
Translates to: TCQGPEPTCCSARLPEHSDVTFV*FCRCST
Trigger: GGTGGAGCACCTACAGAAGCAAACGAAGGTCACGTC...GCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp CATCTGAGCCATGACAGTAAGCTCTGCCTTTGGAAAGGAGAGCTCCCACTTCACGGCTTGCTGTCTGCGTaGTTGCTGGACGGAGTGACC +
Preference number: 4 (lower is better)
Translates to: HLSHDSKLCLWKGELPLHGLLSA*LLDGVT
Trigger: GGTCACTCCGTCCAGCAAGCACGCAGACAGCAAGCC...GTGAAGTGGGAGCTCTCCTTTCCAAAGGCAGAGCTTACTGTCATGGCTCAGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp TATCAAGTTCCCACCCCCTTGGGAGGTCACACGGTGAAACAGACACAGTTATATTCAGCGGCGCGGGCTTaGTGTCTGCGTGCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: YQVPTPLGGHTVKQTQLYSAARA*CLRACW
Trigger: CCAGCAAGCACGCAGACAGCAAGCCCGCGCCGCTGA...ATATAACTGTGTCTGTTTCACCGTGTGACCTCCCAAGGGGGTGGGAACTTGATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp TGTGGTCCTGAGTGCACCCCGACTTGGGTCAGGGGTGCCCAGCTTCACCTCAGAGGGGGAAACGTTCCCTaGTTATGCCTATGTTACTTA +
Preference number: 4 (lower is better)
Translates to: CGPECTPTWVRGAQLHLRGGNVP*LCLCYL
Trigger: TAAGTAACATAGGCATAAGCAGGGAACGTTTCCCCC...TCTGAGGTGAAGCTGGGCACCCCTGACCCAAGTCGGGGTGCACTCAGGACCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp CTTTCGGTGAGCACTGAAGCCTGCTGGCTACGGCCAATGGTGGAGGAGACCTCGCAGACGCATTTTTCCTaGTCCCTAAAAAGCCGAGGA +
Preference number: 4 (lower is better)
Translates to: LSVSTEACWLRPMVEETSQTHFS*SLKSRG
Trigger: TCCTCGGCTTTTTAGGGAGCAGGAAAAATGCGTCTG...CGAGGTCTCCTCCACCATTGGCCGTAGCCAGCAGGCTTCAGTGCTCACCGAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp GCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGCACTGTCATTCCTGTCGTTaGAAGCTTTCCCTGATAGAT +
Preference number: 4 (lower is better)
Translates to: AVRWRQALNTRDARPSVHCHSCR*KLSLID
Trigger: ATCTATCAGGGAAAGCTTCCAACGACAGGAATGACA...GTGCACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp CTAGGGCCACACGGAGCAGAAGCAGCTTCCCACCCAAGCACCTCTGAACTGTGCTCCTGCAGATCCTGCTaGTTGTTGCACGACACTAAT +
Preference number: 4 (lower is better)
Translates to: LGPHGAEAASHPSTSELCSCRSC*LLHDTN
Trigger: ATTAGTGTCGTGCAACAACCAGCAGGATCTGCAGGA...GCACAGTTCAGAGGTGCTTGGGTGGGAAGCTGCTTCTGCTCCGTGTGGCCCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544132.2
CDS-3UTR CCA 90 bp CTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGGAGTCTAGGCTTGGTTaGTCATCATCAGCCAAGACG +
Preference number: 4 (lower is better)
Translates to: LPRPRAHMLFCTITRTQPESRLG*SSSAKT
Trigger: CGTCTTGGCTGATGATGACCAACCAAGCCTAGACTC...CGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp AACGAAAACCTGCTCCACGGGCCGGGCTTCCTGCCCAGGACCGCACAGGCTTTCTGGATTCATCAGTCATaGTTTGATCGTCTCCATTCG +
Preference number: 4 (lower is better)
Translates to: NENLLHGPGFLPRTAQAFWIHQS*FDRLHS
Trigger: CGAATGGAGACGATCAAACCATGACTGATGAATCCA...GAAAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGTGGAGCAGGTTTTCGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp TGTGGTCCTGAGTGCACCCCGACTTGGGTCAGGGGTGCCCAGCTTCACCTCAGAGAGATGTTCACAGAGTaGATTGATGTAGCTCAGGTC +
Preference number: 4 (lower is better)
Translates to: CGPECTPTWVRGAQLHLREMFTE*IDVAQV
Trigger: GACCTGAGCTACATCAATCCACTCTGTGAACATCTC...TCTGAGGTGAAGCTGGGCACCCCTGACCCAAGTCGGGGTGCACTCAGGACCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp CCTCTGCACTGGAACACAGTGGGGGAAACGTTCCCTGCTTATGCCTATGTTACTGGCTTCTGCTTCCGGTaGATGCGGGCATGGGACTTC +
Preference number: 4 (lower is better)
Translates to: PLHWNTVGETFPAYAYVTGFCFR*MRAWDF
Trigger: GAAGTCCCATGCCCGCATCCACCGGAAGCAGAAGCC...AGTAACATAGGCATAAGCAGGGAACGTTTCCCCCACTGTGTTCCAGTGCAGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp CCTCTGCACTGGAACACAGTGGGGGAAACGTTCCCTGCTTATGCCTATGTTACTGCTGGCTACGGCCAATaGTGGAGGAGACCTCGGGAT +
Preference number: 4 (lower is better)
Translates to: PLHWNTVGETFPAYAYVTAGYGQ*WRRPRD
Trigger: ATCCCGAGGTCTCCTCCACCATTGGCCGTAGCCAGC...AGTAACATAGGCATAAGCAGGGAACGTTTCCCCCACTGTGTTCCAGTGCAGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp CTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGGAAATCACGGCCACCTaGAATTACAGCCACCCTGAA +
Preference number: 4 (lower is better)
Translates to: LPRPRAHMLFCTITRTQPEITAT*NYSHPE
Trigger: TTCAGGGTGGCTGTAATTCCAGGTGGCCGTGATTTC...CGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp TTTAATGTCATCGCCCTCCCAGTTCCGGATGGCTTCCGTCAGGATCTGCAGCTCCCTCCATGCAGTCTCTaGGTGTGCCTCCACCTTCAT +
Preference number: 4 (lower is better)
Translates to: FNVIALPVPDGFRQDLQLPPCSL*VCLHLH
Trigger: ATGAAGGTGGAGGCACACCCAGAGACTGCATGGAGG...GAGCTGCAGATCCTGACGGAAGCCATCCGGAACTGGGAGGGCGATGACATTAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR TCA 90 bp CATCTGAGCCATGACAGTAAGCTCTGCCTTTGGAAAGGAGAGCTCCCACTTCACAAAGACTTTATGCGGTaGGACGAGGGCCGGGCACAC +
Preference number: 4 (lower is better)
Translates to: HLSHDSKLCLWKGELPLHKDFMR*DEGRAH
Trigger: GTGTGCCCGGCCCTCGTCTCACCGCATAAAGTCTTT...GTGAAGTGGGAGCTCTCCTTTCCAAAGGCAGAGCTTACTGTCATGGCTCAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp CATCTGAGAATCACAGTACTCAGACAGCGGACAAGAGCAAACACCTCTAGGTGGCCTCCGACTCTCTGCTaGGCTTCGGGCAACTTGGTG +
Preference number: 4 (lower is better)
Translates to: HLRITVLRQRTRANTSRWPPTLC*ASGNLV
Trigger: CACCAAGTTGCCCGAAGCTCAGCAGAGAGTCGGAGG...CCACCTAGAGGTGTTTGCTCTTGTCCGCTGTCTGAGTACTGTGATTCTCAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp ACCTCAGAGTTTCTGAAGGACAACAGCAACAACCCGGAGCAGGGGCACGTGTGCGGTTTCCCACAGACGTaGCCTTCGTTTGCTTCTGTA +
Preference number: 4 (lower is better)
Translates to: TSEFLKDNSNNPEQGHVCGFPQT*PSFASV
Trigger: TACAGAAGCAAACGAAGGTCACGTCTGTGGGAAACC...GCACACGTGCCCCTGCTCCGGGTTGTTGCTGTTGTCCTTCAGAAACTCTGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR TCA 90 bp AAAACCTGCTCCACGGGCCGGGCTTCCTGCCCAGGACCGCACAGGCTTTCCAGAAGTAAGATCTCTCTTTaGGGGAAGACAAAACAGTGT +
Preference number: 4 (lower is better)
Translates to: KTCSTGRASCPGPHRLSRSKISL*GKTKQC
Trigger: ACACTGTTTTGTCTTCCCTCAAAGAGAGATCTTACT...TCTGGAAAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGTGGAGCAGGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp TCAGGTCCTCAGAGTCAATCCCTCCTGTCTGGATTCATCAGTCATGGTTTGATCGGCAATGCCGTAACATaGGGCCCTCATGGCCGCACC +
Preference number: 4 (lower is better)
Translates to: SGPQSQSLLSGFISHGLIGNAVT*GPHGRT
Trigger: GGTGCGGCCATGAGGGCCTCATGTTACGGCATTGCC...GATCAAACCATGACTGATGAATCCAGACAGGAGGGATTGACTCTGAGGACCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp CTGGGGACTCGGACAGCAACGCTACCGGCTCCGAGAGGACAGTTAATGTCGCCTTGGGAGGTCACACGGTaGAACAGACACAGTTATATA +
Preference number: 4 (lower is better)
Translates to: LGTRTATLPAPRGQLMSPWEVTR*NRHSYI
Trigger: TATATAACTGTGTCTGTTTCACCGTGTGACCTCCCA...AGGCGACATTAACTGTCCTCTCGGAGCCGGTAGCGTTGCTGTCCGAGTCCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp AAAGTAGAAACAATGGCCCTCTGGATGCCACATCGCCACTGCCACAGGAGAACTGGATGTAGGCTCACGTaGACACACCACCTCCCTCCA +
Preference number: 4 (lower is better)
Translates to: KVETMALWMPHRHCHRRTGCRLT*THHLPP
Trigger: TGGAGGGAGGTGGTGTGTTCACGTGAGCCTACATCC...AGTTCTCCTGTGGCAGTGGCGATGTGGCATCCAGAGGGCCATTGTTTCTACTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp AGAACACAGCCGTTGGAACTGGGCTCACAGCACCTTTGCTGCATATATTCTTCTAGCTCTGAACACACGTaGCGCCCGCCCGTCTGTGCA +
Preference number: 4 (lower is better)
Translates to: RTQPLELGSQHLCCIYSSSSEHT*RPPVCA
Trigger: TGCACAGACGGGCGGGCGTCACGTGTGTTCAGAGCT...AGAAGAATATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp CCTCTACTACAGTCCAGTAGTCTACACTTGCAGAGGCTGAATGCTTCAGCTTTCGGTGGAGACAAGCTCTaGACACACGTGACGCCCGCC +
Preference number: 4 (lower is better)
Translates to: PLLQSSSLHLQRLNASAFGGDKL*THVTPA
Trigger: GGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACC...GAAAGCTGAAGCATTCAGCCTCTGCAAGTGTAGACTACTGGACTGTAGTAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp ACGGTGGAGGCCCTGGTGCTGCGGAACGAACCAGGCATCCACCAGGCTTCTGCTCTACCAGTTGATTGTTaGTATTATCGGTCATGTCCA +
Preference number: 4 (lower is better)
Translates to: TVEALVLRNEPGIHQASALPVDC*YYRSCP
Trigger: TGGACATGACCGATAATAGCAACAATCAACTGGTAG...AGCAGAAGCCTGGTGGATGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCACCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp AGAGCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGCTTCGGGCAACTTGGTaGATTCTTCTAAAGACTGTA +
Preference number: 4 (lower is better)
Translates to: RAVRWRQALNTRDARPSVLRATW*ILLKTV
Trigger: TACAGTCTTTAGAAGAATGCACCAAGTTGCCCGAAG...CACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp CGATTACCAGAACACAGCCGTTGGAACTGGGCTCACAGCACCTTTGCTGCATATCGAGAATCCCAGGGCTaGTGGCACCTTTGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: RLPEHSRWNWAHSTFAAYRESQG*WHLWSP
Trigger: TGGAGACCAAAGGTGCCAGCAGCCCTGGGATTCTCG...ATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp TTACGAAGAGCACCCTCGGATGTAGGCTCACGTGAACACACCACCTCCCTCCAAGCTTCCGTCAGGATCTaGAGCTCAAGCTCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: LRRAPSDVGSREHTTSLQASVRI*SSSSFL
Trigger: GAGGAAAGAGCTTGAGCTGCAGATCCTGACGGAAGC...TTGGAGGGAGGTGGTGTGTTCACGTGAGCCTACATCCGAGGGTGCTCTTCGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp ACGCCCAGCGCATGTGGACAAGCACAGACGCCACTGAGTGTGAAGGAACGAGCTGATCCTGCTGGTTGTTaGACGACACTAATATCCGCT +
Preference number: 4 (lower is better)
Translates to: TPSACGQAQTPLSVKERADPAGC*TTLISA
Trigger: AGCGGATATTAGTGTCGTGCAACAACCAGCAGGATC...AGCTCGTTCCTTCACACTCAGTGGCGTCTGTGCTTGTCCACATGCGCTGGGCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp CCTCTACTACAGTCCAGTAGTCTACACTTGCAGAGGCTGAATGCTTCAGCTTTCCGCGGGCTTGCTGTCTaGGTGCTTGCTGGACGGAGT +
Preference number: 4 (lower is better)
Translates to: PLLQSSSLHLQRLNASAFRGLAV*VLAGRS
Trigger: ACTCCGTCCAGCAAGCACGCAGACAGCAAGCCCGCG...GAAAGCTGAAGCATTCAGCCTCTGCAAGTGTAGACTACTGGACTGTAGTAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp CCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAACTGGGCTCACGCTTCCGTTCAGGTTTaGGCTTGGGCAGCAGCTTTT +
Preference number: 4 (lower is better)
Translates to: PTCCSARLPEHSRWNWAHASVQV*AWAAAF
Trigger: AAAAGCTGCTGCCCAAGCGCAAACCTGAACGGAAGC...GTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp AGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAAGCTTCCGTTCAGGTTTaGGCTTGGGCAGCAGCTTTT +
Preference number: 4 (lower is better)
Translates to: RPRAHMLFCTITRTQPLEASVQV*AWAAAF
Trigger: AAAAGCTGCTGCCCAAGCGCAAACCTGAACGGAAGC...TTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp TCCACCAGGCTTCTGCTTCCGGTGGATGCGGGCATGGGACTTCTTATTCACGTATCTGCTTCCGGTGGATaGGGGCATGGGACTTCTTAT +
Preference number: 4 (lower is better)
Translates to: STRLLLPVDAGMGLLIHVSASGG*GHGTSY
Trigger: ATAAGAAGTCCCATGCCCGCATCCACCGGAAGCAGA...TACGTGAATAAGAAGTCCCATGCCCGCATCCACCGGAAGCAGAAGCCTGGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp CCTCTACTACAGTCCAGTAGTCTACACTTGCAGAGGCTGAATGCTTCAGCTTTCTCCTTCAGCGACGCCTaGAGAAAGCCCTCCGGGTCC +
Preference number: 4 (lower is better)
Translates to: PLLQSSSLHLQRLNASAFSFSDA*RKPSGS
Trigger: GGACCCGGAGGGCTTTCTGCAGGCGTCGCTGAAGGA...GAAAGCTGAAGCATTCAGCCTCTGCAAGTGTAGACTACTGGACTGTAGTAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317133.9
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp CTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGCTTGCAGAGGCTGAATaGTTCAGCTTTCGGGCTTTA +
Preference number: 4 (lower is better)
Translates to: LPRPRAHMLFCTITRTQPLAEAE*FSFRAL
Trigger: TAAAGCCCGAAAGCTGAAGCATTCAGCCTCTGCAAG...CGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp ACCTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCATGCCACATCGCCACTaGCACAGGAGAACTGTCTTT +
Preference number: 4 (lower is better)
Translates to: TCQGPEPTCCSARLPEHSMPHRH*HRRTVF
Trigger: AAAGACAGTTCTCCTGTGGCAGTGGCGATGTGGCAT...GCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp GGACATGTAAGTGACGTTGCCCAGAGTTTTAATGTCATCGCCCTCCCAGTTCCGCATGCCTTTCAACCCTaGAGGCAGGACCTCAGACCC +
Preference number: 4 (lower is better)
Translates to: GHVSDVAQSFNVIALPVPHAFQP*RQDLRP
Trigger: GGGTCTGAGGTCCTGCCTGCAGGGTTGAAAGGCATG...CGGAACTGGGAGGGCGATGACATTAAAACTCTGGGCAACGTCACTTACATGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR CCA 90 bp CAAAGGAGTAACCCTCGGGCAAATCGTGGCCCCTTTAAACGTTTATATCAAGTTCGCGCACGTAGTTGCTaGGGAACCAGCCGGTCCGGC +
Preference number: 4 (lower is better)
Translates to: QRSNPRANRGPFKRLYQVRARSC*GTSRSG
Trigger: GCCGGACCGGCTGGTTCCCCAGCAACTACGTGCGCG...AACTTGATATAAACGTTTAAAGGGGCCACGATTTGCCCGAGGGTTACTCCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp ATCGCCCTCCCAGTTCCGGATGGCTTCCGTCAGGATCTGCAGCTCAAGCTCTTTTCAGTGTTCCTGATTTaGGAGACACAGGCTTCTCGC +
Preference number: 4 (lower is better)
Translates to: IALPVPDGFRQDLQLKLFSVFLI*ETQASR
Trigger: GCGAGAAGCCTGTGTCTCCCAAATCAGGAACACTGA...AAAGAGCTTGAGCTGCAGATCCTGACGGAAGCCATCCGGAACTGGGAGGGCGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR CCA 90 bp CTGGGGACTCGGACAGCAACGCTACCGGCTCCGAGAGGACAGTTAATGTCGCCTTCGTATCAAATCCTTTaGGAGGGCTCTTCAGTGTTC +
Preference number: 4 (lower is better)
Translates to: LGTRTATLPAPRGQLMSPSYQIL*EGSSVF
Trigger: GAACACTGAAGAGCCCTCCCAAAGGATTTGATACGA...AGGCGACATTAACTGTCCTCTCGGAGCCGGTAGCGTTGCTGTCCGAGTCCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp GCGGCAGTGCCGTATGGGCCTTCCTTGAGGTCAAGACTGAGTCTGTCAGCCAGCAACTTAACTTCTCACTaGTCTGCAATGGCCGTAGGT +
Preference number: 4 (lower is better)
Translates to: AAVPYGPSLRSRLSLSASNLTSH*SAMAVG
Trigger: ACCTACGGCCATTGCAGACCAGTGAGAAGTTAAGTT...GCTGGCTGACAGACTCAGTCTTGACCTCAAGGAAGGCCCATACGGCACTGCCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp CATCTGAGCCATGACAGTAAGCTCTGCCTTTGGAAAGGAGAGCTCCCACTTCACCCTCCCAGTTCCGGATaGCTTCCGTCAGGATCTGCA +
Preference number: 4 (lower is better)
Translates to: HLSHDSKLCLWKGELPLHPPSSG*LPSGSA
Trigger: TGCAGATCCTGACGGAAGCCATCCGGAACTGGGAGG...GTGAAGTGGGAGCTCTCCTTTCCAAAGGCAGAGCTTACTGTCATGGCTCAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp ACGCCCAGCGCATGTGGACAAGCACAGACGCCACTGAGTGTGAAGGAACGAGCTTCCTGCAGATCCTGCTaGTTGTTGCACGACACTAAT +
Preference number: 4 (lower is better)
Translates to: TPSACGQAQTPLSVKERASCRSC*LLHDTN
Trigger: ATTAGTGTCGTGCAACAACCAGCAGGATCTGCAGGA...AGCTCGTTCCTTCACACTCAGTGGCGTCTGTGCTTGTCCACATGCGCTGGGCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp CGATTACCAGAACACAGCCGTTGGAACTGGGCTCACAGCACCTTTGCTGCATATTCAGGCTCCAGGGCTTaGGTGTTTTCGGAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: RLPEHSRWNWAHSTFAAYSGSRA*VFSEAP
Trigger: TGGAGCCTCCGAAAACACCCAAGCCCTGGAGCCTGA...ATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp AAAGTAGAAACAATGGCCCTCTGGATGCCACATCGCCACTGCCACAGGAGAACTTCAGGCTCCAGGGCTTaGGTGTTTTCGGAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: KVETMALWMPHRHCHRRTSGSRA*VFSEAP
Trigger: TGGAGCCTCCGAAAACACCCAAGCCCTGGAGCCTGA...AGTTCTCCTGTGGCAGTGGCGATGTGGCATCCAGAGGGCCATTGTTTCTACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp ACCTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCGAGTCTAGGCTTGGTTaGTCATCATCAGCCAAGACG +
Preference number: 4 (lower is better)
Translates to: TCQGPEPTCCSARLPEHSESRLG*SSSAKT
Trigger: CGTCTTGGCTGATGATGACCAACCAAGCCTAGACTC...GCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp TATCAAGTTCCCACCCCCTTGGGAGGTCACACGGTGAAACAGACACAGTTATATATACAGAGAGCAAGGTaGCGCCCCACCCAGCCCTGC +
Preference number: 4 (lower is better)
Translates to: YQVPTPLGGHTVKQTQLYIQRAR*RPTQPC
Trigger: GCAGGGCTGGGTGGGGCGCCACCTTGCTCTCTGTAT...ATATAACTGTGTCTGTTTCACCGTGTGACCTCCCAAGGGGGTGGGAACTTGATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp TGTGGTCCTGAGTGCACCCCGACTTGGGTCAGGGGTGCCCAGCTTCACCTCAGATCAATCCCTCCTGTCTaGATTCATCAGTCATGGTTT +
Preference number: 4 (lower is better)
Translates to: CGPECTPTWVRGAQLHLRSIPPV*IHQSWF
Trigger: AAACCATGACTGATGAATCCAGACAGGAGGGATTGA...TCTGAGGTGAAGCTGGGCACCCCTGACCCAAGTCGGGGTGCACTCAGGACCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp CTGTGGTCACCCTTATTTATTGCTGAAGCAGAACGAAAACCTGCTCCACGGGCCAGCACTGAAGCCTGCTaGCTACGGCCAATGGTGGAG +
Preference number: 4 (lower is better)
Translates to: LWSPLFIAEAERKPAPRASTEAC*LRPMVE
Trigger: CTCCACCATTGGCCGTAGCCAGCAGGCTTCAGTGCT...GGCCCGTGGAGCAGGTTTTCGTTCTGCTTCAGCAATAAATAAGGGTGACCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp TCAGGTCCTCAGAGTCAATCCCTCCTGTCTGGATTCATCAGTCATGGTTTGATCCCAGGTTCTGCAGCATaGGGCAGGTCCACGCTGAGC +
Preference number: 4 (lower is better)
Translates to: SGPQSQSLLSGFISHGLIPGSAA*GRSTLS
Trigger: GCTCAGCGTGGACCTGCCCCATGCTGCAGAACCTGG...GATCAAACCATGACTGATGAATCCAGACAGGAGGGATTGACTCTGAGGACCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp CTGGGGACTCGGACAGCAACGCTACCGGCTCCGAGAGGACAGTTAATGTCGCCTAGCCGAGGAAGATACTaGATCCACAGAAAGAAAAGG +
Preference number: 4 (lower is better)
Translates to: LGTRTATLPAPRGQLMSPSRGRY*IHRKKR
Trigger: CCTTTTCTTTCTGTGGATCCAGTATCTTCCTCGGCT...AGGCGACATTAACTGTCCTCTCGGAGCCGGTAGCGTTGCTGTCCGAGTCCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp TTACGAAGAGCACCCTCGGATGTAGGCTCACGTGAACACACCACCTCCCTCCAACACAGAGCCGTGAGGTaGAGACAAGCTCTGAACACA +
Preference number: 4 (lower is better)
Translates to: LRRAPSDVGSREHTTSLQHRAVR*RQALNT
Trigger: TGTGTTCAGAGCTTGTCTCCACCTCACGGCTCTGTG...TTGGAGGGAGGTGGTGTGTTCACGTGAGCCTACATCCGAGGGTGCTCTTCGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp AGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAAGGTTTGGCGAAGGAGTaGGCAGTGGGGAAGAAAGAA +
Preference number: 4 (lower is better)
Translates to: RPRAHMLFCTITRTQPLEGLAKE*AVGKKE
Trigger: TTCTTTCTTCCCCACTGCCCACTCCTTCGCCAAACC...TTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp AGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAAGATGACGTCTCCTTTTaGGAAGGAAAGCTCGTCCTC +
Preference number: 4 (lower is better)
Translates to: RPRAHMLFCTITRTQPLEDDVSF*EGKLVL
Trigger: GAGGACGAGCTTTCCTTCTCAAAAGGAGACGTCATC...TTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp TTACGAAGAGCACCCTCGGATGTAGGCTCACGTGAACACACCACCTCCCTCCAAGATGACGTCTCCTTTTaGGAAGGAAAGCTCGTCCTC +
Preference number: 4 (lower is better)
Translates to: LRRAPSDVGSREHTTSLQDDVSF*EGKLVL
Trigger: GAGGACGAGCTTTCCTTCTCAAAAGGAGACGTCATC...TTGGAGGGAGGTGGTGTGTTCACGTGAGCCTACATCCGAGGGTGCTCTTCGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp ACAGGCTTCGTCTCCTCTGCACTGGAACACAGTGGGGGAAACGTTCCCTGCTTAGATGACGTCTCCTTTTaGGAAGGAAAGCTCGTCCTC +
Preference number: 4 (lower is better)
Translates to: TGFVSSALEHSGGNVPCLDDVSF*EGKLVL
Trigger: GAGGACGAGCTTTCCTTCTCAAAAGGAGACGTCATC...TAAGCAGGGAACGTTTCCCCCACTGTGTTCCAGTGCAGAGGAGACGAAGCCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp ATCTACAGGATAAGAAATGGCTTCATCTCCTCATCCATACAAGGTGAGAGCAAAAGCCGGTCCGGCCGTTaGGTGTGCCCTCCCACCAGC +
Preference number: 4 (lower is better)
Translates to: IYRIRNGFISSSIQGESKSRSGR*VCPPTS
Trigger: GCTGGTGGGAGGGCACACTCAACGGCCGGACCGGCT...TTTGCTCTCACCTTGTATGGATGAGGAGATGAAGCCATTTCTTATCCTGTAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp AGAACACAGCCGTTGGAACTGGGCTCACAGCACCTTTGCTGCATATATTCTTCTCCTCCGACTCTCTGCTaGGCTTCGGGCAACTTGGTG +
Preference number: 4 (lower is better)
Translates to: RTQPLELGSQHLCCIYSSPPTLC*ASGNLV
Trigger: CACCAAGTTGCCCGAAGCTCAGCAGAGAGTCGGAGG...AGAAGAATATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp CGATTACCAGAACACAGCCGTTGGAACTGGGCTCACAGCACCTTTGCTGCATATCACCTTTGGTCTCCATaGACTCCCCCAACTCCTCAC +
Preference number: 4 (lower is better)
Translates to: RLPEHSRWNWAHSTFAAYHLWSP*TPPTPH
Trigger: GTGAGGAGTTGGGGGAGTTCATGGAGACCAAAGGTG...ATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp CATCTGAGCCATGACAGTAAGCTCTGCCTTTGGAAAGGAGAGCTCCCACTTCACCACCTTTGGTCTCCATaGACTCCCCCAACTCCTCAC +
Preference number: 4 (lower is better)
Translates to: HLSHDSKLCLWKGELPLHHLWSP*TPPTPH
Trigger: GTGAGGAGTTGGGGGAGTTCATGGAGACCAAAGGTG...GTGAAGTGGGAGCTCTCCTTTCCAAAGGCAGAGCTTACTGTCATGGCTCAGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp AAAGTAGAAACAATGGCCCTCTGGATGCCACATCGCCACTGCCACAGGAGAACTCACCTTTGGTCTCCATaGACTCCCCCAACTCCTCAC +
Preference number: 4 (lower is better)
Translates to: KVETMALWMPHRHCHRRTHLWSP*TPPTPH
Trigger: GTGAGGAGTTGGGGGAGTTCATGGAGACCAAAGGTG...AGTTCTCCTGTGGCAGTGGCGATGTGGCATCCAGAGGGCCATTGTTTCTACTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp ACGCCCAGCGCATGTGGACAAGCACAGACGCCACTGAGTGTGAAGGAACGAGCTTTCTTGACATTGGGCTaGAAGGTTTTTGAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: TPSACGQAQTPLSVKERAFLTLG*KVFEGS
Trigger: GCTGCCTTCAAAAACCTTTCAGCCCAATGTCAAGAA...AGCTCGTTCCTTCACACTCAGTGGCGTCTGTGCTTGTCCACATGCGCTGGGCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp CATCTGAGCCATGACAGTAAGCTCTGCCTTTGGAAAGGAGAGCTCCCACTTCACTCACTTCCGGCACACTaGATCAGGACCTGGGACATG +
Preference number: 4 (lower is better)
Translates to: HLSHDSKLCLWKGELPLHSLPAH*IRTWDM
Trigger: CATGTCCCAGGTCCTGATTCAGTGTGCCGGAAGTGA...GTGAAGTGGGAGCTCTCCTTTCCAAAGGCAGAGCTTACTGTCATGGCTCAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp AGAACCGTAAACAGCAACACAACACTCTCCCAAGGTGCCCAGCTCAAAGGCATCTCACTTCCGGCACACTaGATCAGGACCTGGGACATG +
Preference number: 4 (lower is better)
Translates to: RTVNSNTTLSQGAQLKGISLPAH*IRTWDM
Trigger: CATGTCCCAGGTCCTGATTCAGTGTGCCGGAAGTGA...GATGCCTTTGAGCTGGGCACCTTGGGAGAGTGTTGTGTTGCTGTTTACGGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp AAACAATGGCCCTCTGGATGCCACATCGCCACTGCCACAGGAGAACTGTCTTTTTCACTTCCGGCACACTaGATCAGGACCTGGGACATG +
Preference number: 4 (lower is better)
Translates to: KQWPSGCHIATATGELSFSLPAH*IRTWDM
Trigger: CATGTCCCAGGTCCTGATTCAGTGTGCCGGAAGTGA...AAAAGACAGTTCTCCTGTGGCAGTGGCGATGTGGCATCCAGAGGGCCATTGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp CCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAACTGGGCTCACGGTTTCCCACAGACGTaGCCTTCGTTTGCTTCTGTA +
Preference number: 4 (lower is better)
Translates to: PTCCSARLPEHSRWNWAHGFPQT*PSFASV
Trigger: TACAGAAGCAAACGAAGGTCACGTCTGTGGGAAACC...GTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp TCCACCAGGCTTCTGCTTCCGGTGGATGCGGGCATGGGACTTCTTATTCACGTAGGTTTCCCACAGACGTaGCCTTCGTTTGCTTCTGTA +
Preference number: 4 (lower is better)
Translates to: STRLLLPVDAGMGLLIHVGFPQT*PSFASV
Trigger: TACAGAAGCAAACGAAGGTCACGTCTGTGGGAAACC...TACGTGAATAAGAAGTCCCATGCCCGCATCCACCGGAAGCAGAAGCCTGGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp TTACGAAGAGCACCCTCGGATGTAGGCTCACGTGAACACACCACCTCCCTCCAAGGTATGAGATGGCACTaGATGAGGCTTTATGGTGGG +
Preference number: 4 (lower is better)
Translates to: LRRAPSDVGSREHTTSLQGMRWH*MRLYGG
Trigger: CCCACCATAAAGCCTCATTCAGTGCCATCTCATACC...TTGGAGGGAGGTGGTGTGTTCACGTGAGCCTACATCCGAGGGTGCTCTTCGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp AGAGCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGTGCAGTAAGCTTCAATaGCTTTCAGAATCTGAGCAT +
Preference number: 4 (lower is better)
Translates to: RAVRWRQALNTRDARPSVCSKLQ*LSESEH
Trigger: ATGCTCAGATTCTGAAAGTCATTGAAGCTTACTGCA...CACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp ACCTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCTCATCAGCCAAGACGTaGTTATGCATCAGGTCAGTG +
Preference number: 4 (lower is better)
Translates to: TCQGPEPTCCSARLPEHSSSAKT*LCIRSV
Trigger: CACTGACCTGATGCATAATCACGTCTTGGCTGATGA...GCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp GCGGCAGTGCCGTATGGGCCTTCCTTGAGGTCAAGACTGAGTCTGTCAGCCAGCAAATCTGATGCGCAATaGGTTGTTCTGAGACCAGTA +
Preference number: 4 (lower is better)
Translates to: AAVPYGPSLRSRLSLSASKSDAQ*VVLRPV
Trigger: TACTGGTCTCAGAACAACTCATTGCGCATCAGATTT...GCTGGCTGACAGACTCAGTCTTGACCTCAAGGAAGGCCCATACGGCACTGCCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp CTTTCGGTGAGCACTGAAGCCTGCTGGCTACGGCCAATGGTGGAGGAGACCTCGGACAAGAGTTGTTCCTaGGTTAAAACCTGCTACAAC +
Preference number: 4 (lower is better)
Translates to: LSVSTEACWLRPMVEETSDKSCS*VKTCYN
Trigger: GTTGTAGCAGGTTTTAACTCAGGAACAACTCTTGTC...CGAGGTCTCCTCCACCATTGGCCGTAGCCAGCAGGCTTCAGTGCTCACCGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp GCGGCAGTGCCGTATGGGCCTTCCTTGAGGTCAAGACTGAGTCTGTCAGCCAGCGACAAGAGTTGTTCCTaGGTTAAAACCTGCTACAAC +
Preference number: 4 (lower is better)
Translates to: AAVPYGPSLRSRLSLSASDKSCS*VKTCYN
Trigger: GTTGTAGCAGGTTTTAACTCAGGAACAACTCTTGTC...GCTGGCTGACAGACTCAGTCTTGACCTCAAGGAAGGCCCATACGGCACTGCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp CTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGCTGGTGAGAGATATATaGGCAACAGCTCTTACGAGA +
Preference number: 4 (lower is better)
Translates to: LPRPRAHMLFCTITRTQPLVRDI*ATALTR
Trigger: TCTCGTAAGAGCTGTTGCTCATATATCTCTCACCAG...CGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp ACCTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCATGCGAGTGAACATCTaGGCCATGACAGTAAGCTCT +
Preference number: 4 (lower is better)
Translates to: TCQGPEPTCCSARLPEHSMRVNI*AMTVSS
Trigger: AGAGCTTACTGTCATGGCTCAGATGTTCACTCGCAT...GCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp TTACGAAGAGCACCCTCGGATGTAGGCTCACGTGAACACACCACCTCCCTCCAATGGCCCCTCAAGCAATaGCTAGGTGTGGATTTGATG +
Preference number: 4 (lower is better)
Translates to: LRRAPSDVGSREHTTSLQWPLKQ*LGVDLM
Trigger: CATCAAATCCACACCTAGTCATTGCTTGAGGGGCCA...TTGGAGGGAGGTGGTGTGTTCACGTGAGCCTACATCCGAGGGTGCTCTTCGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp AGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAACTCCCAGGACAAGACTaGTACTGCATCAGAGTTCAC +
Preference number: 4 (lower is better)
Translates to: RPRAHMLFCTITRTQPLELPGQD*YCIRVH
Trigger: GTGAACTCTGATGCAGTATCAGTCTTGTCCTGGGAG...TTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp AAAACTCCCCTAAATCAGTCTTCTAGGGCCACACGGAGCAGAAGCAGCTTCCCACAACTGATCACTTGCTaGCAGCTCAGCCACGGGATG +
Preference number: 4 (lower is better)
Translates to: KTPLNQSSRATRSRSSFPQLITC*QLSHGM
Trigger: CATCCCGTGGCTGAGCTGTCAGCAAGTGATCAGTTG...TGGGAAGCTGCTTCTGCTCCGTGTGGCCCTAGAAGACTGATTTAGGGGAGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544132.2
CDS-3UTR GCA 90 bp CCATTAGCTTGTTCCATGCTGAATGAAGCCACCCAACTTTCTAAACAACGTGCTCCTCGCGCACGTAGTTaGTGGGGAACCAGCCGGTCC +
Preference number: 4 (lower is better)
Translates to: PLACSMLNEATQLSKQRAPRARS*WGTSRS
Trigger: GGACCGGCTGGTTCCCCAGCAACTACGTGCGCGAGG...AGCACGTTGTTTAGAAAGTTGGGTGGCTTCATTCAGCATGGAACAAGCTAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp ACCTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCAACTTCTCACTGGTCTaGAATGGCCGTAGGTACGTT +
Preference number: 4 (lower is better)
Translates to: TCQGPEPTCCSARLPEHSNFSLV*NGRRYV
Trigger: AACGTACCTACGGCCATTGCAGACCAGTGAGAAGTT...GCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp AGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAACGTGAGGACATTCACTaGAGAAGGGTGATTGGCACA +
Preference number: 4 (lower is better)
Translates to: RPRAHMLFCTITRTQPLEREDIH*RRVIGT
Trigger: TGTGCCAATCACCCTTCTGCAGTGAATGTCCTCACG...TTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp TCCCAGAGAAGTGAAGAAATGATTGGCATTAAGGAGTCCACACAACCAGGGCAGGGCTTGCTGTCTGCGTaGTTGCTGGACGGAGTGACC +
Preference number: 4 (lower is better)
Translates to: SQRSEEMIGIKESTQPGQGLLSA*LLDGVT
Trigger: GGTCACTCCGTCCAGCAAGCACGCAGACAGCAAGCC...CTGCCCTGGTTGTGTGGACTCCTTAATGCCAATCATTTCTTCACTTCTCTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp AAACAATGGCCCTCTGGATGCCACATCGCCACTGCCACAGGAGAACTGTCTTTTAACGAGAAAGGCTACTaGGACGCCCCAGGGAGTCTA +
Preference number: 4 (lower is better)
Translates to: KQWPSGCHIATATGELSFNEKGY*DAPGSL
Trigger: TAGACTCCCTGGGGCGTCGCAGTAGCCTTTCTCGTT...AAAAGACAGTTCTCCTGTGGCAGTGGCGATGTGGCATCCAGAGGGCCATTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp AACGAAAACCTGCTCCACGGGCCGGGCTTCCTGCCCAGGACCGCACAGGCTTTCGAACCACCACAGGTATaGATTCAAAATGGGATATTT +
Preference number: 4 (lower is better)
Translates to: NENLLHGPGFLPRTAQAFEPPQV*IQNGIF
Trigger: AAATATCCCATTTTGAATGCATACCTGTGGTGGTTC...GAAAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGTGGAGCAGGTTTTCGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp ACGGTGGAGGCCCTGGTGCTGCGGAACGAACCAGGCATCCACCAGGCTTCTGCTGAACCACCACAGGTATaGATTCAAAATGGGATATTT +
Preference number: 4 (lower is better)
Translates to: TVEALVLRNEPGIHQASAEPPQV*IQNGIF
Trigger: AAATATCCCATTTTGAATGCATACCTGTGGTGGTTC...AGCAGAAGCCTGGTGGATGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCACCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp CCTCTGCACTGGAACACAGTGGGGGAAACGTTCCCTGCTTATGCCTATGTTACTTGTCAGCCAGCAAGTTaGCCTCAGAAACCCGCAGGT +
Preference number: 4 (lower is better)
Translates to: PLHWNTVGETFPAYAYVTCQPAS*PQKPAG
Trigger: ACCTGCGGGTTTCTGAGGGCAACTTGCTGGCTGACA...AGTAACATAGGCATAAGCAGGGAACGTTTCCCCCACTGTGTTCCAGTGCAGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp TGTGGTCCTGAGTGCACCCCGACTTGGGTCAGGGGTGCCCAGCTTCACCTCAGAAACGTTCCCTGCTTATaGCTATGTTACTTAGTGGAA +
Preference number: 4 (lower is better)
Translates to: CGPECTPTWVRGAQLHLRNVPCL*LCYLVE
Trigger: TTCCACTAAGTAACATAGGCATAAGCAGGGAACGTT...TCTGAGGTGAAGCTGGGCACCCCTGACCCAAGTCGGGGTGCACTCAGGACCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp CCTGCTACAACAGCAAACTCCAATAAACTCAAGTTGAATGGTTTCCCACTGCAAACGGGCCGGGCTTCCTaGCCAGGACCGCACAGGCTT +
Preference number: 4 (lower is better)
Translates to: PATTANSNKLKLNGFPLQTGRAS*PGPHRL
Trigger: AAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGT...TTGCAGTGGGAAACCATTCAACTTGAGTTTATTGGAGTTTGCTGTTGTAGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp CTGTGGTCACCCTTATTTATTGCTGAAGCAGAACGAAAACCTGCTCCACGGGCCGAAGCCAAAGGGGCTTaGTGGGCACCAGAGACTGTA +
Preference number: 4 (lower is better)
Translates to: LWSPLFIAEAERKPAPRAEAKGA*WAPETV
Trigger: TACAGTCTCTGGTGCCCAGCAAGCCCCTTTGGCTTC...GGCCCGTGGAGCAGGTTTTCGTTCTGCTTCAGCAATAAATAAGGGTGACCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp AAACAATGGCCCTCTGGATGCCACATCGCCACTGCCACAGGAGAACTGTCTTTTGGCCCAGAGCCCACATaGTGTTCTGCACGATTACCA +
Preference number: 4 (lower is better)
Translates to: KQWPSGCHIATATGELSFGPEPT*CSARLP
Trigger: TGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCC...AAAAGACAGTTCTCCTGTGGCAGTGGCGATGTGGCATCCAGAGGGCCATTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp GTGGGGAAGAAAGAAATCACGGCCACCTGGAATTACAGCCACCCTGAAGAAGGAGGCCCAGAGCCCACATaGTGTTCTGCACGATTACCA +
Preference number: 4 (lower is better)
Translates to: VGKKEITATWNYSHPEEGGPEPT*CSARLP
Trigger: TGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCC...TCCTTCTTCAGGGTGGCTGTAATTCCAGGTGGCCGTGATTTCTTTCTTCCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp ACCTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCTTGCAGAGGCTGAATaGTTCAGCTTTCGGGCTTTA +
Preference number: 4 (lower is better)
Translates to: TCQGPEPTCCSARLPEHSLAEAE*FSFRAL
Trigger: TAAAGCCCGAAAGCTGAAGCATTCAGCCTCTGCAAG...GCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp GCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGCACACAGGTCACATTCAGTaGTTTTTGAAGCAGAAATTG +
Preference number: 4 (lower is better)
Translates to: AVRWRQALNTRDARPSVHTGHIQ*FLKQKL
Trigger: CAATTTCTGCTTCAAAAAGCACTGAATGTGACCTGT...GTGCACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp CCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAACTGGGCTCACCATAAACCCCATCTCTaGCGGAGATTAACACTGGGC +
Preference number: 4 (lower is better)
Translates to: PTCCSARLPEHSRWNWAHHKPHL*RRLTLG
Trigger: GCCCAGTGTTAATCTCCGGCAGAGATGGGGTTTATG...GTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp GCGGGCATGGGACTTCTTATTCACGTAGCTGGAAAGGACATTCTAGCATGGGGACAAAAGAATGCCTCCTaGCTCCATGGTAGCGCTGGC +
Preference number: 4 (lower is better)
Translates to: AGMGLLIHVAGKDILAWGQKNAS*LHGSAG
Trigger: GCCAGCGCTACCATGGAGGCAGGAGGCATTCTTTTG...TCCCCATGCTAGAATGTCCTTTCCAGCTACGTGAATAAGAAGTCCCATGCCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426073.6
CDS-3UTR CCA 90 bp CCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAACTGGGCTCACTCCACACGGGTGACATaGATGACGTCTCCTTTTGAG +
Preference number: 4 (lower is better)
Translates to: PTCCSARLPEHSRWNWAHSTRVT*MTSPFE
Trigger: CTCAAAAGGAGACGTCATCCATGTCACCCGTGTGGA...GTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp CCTGCTACAACAGCAAACTCCAATAAACTCAAGTTGAATGGTTTCCCACTGCAACGCGCACGTAGTTGCTaGGGAACCAGCCGGTCCGGC +
Preference number: 4 (lower is better)
Translates to: PATTANSNKLKLNGFPLQRARSC*GTSRSG
Trigger: GCCGGACCGGCTGGTTCCCCAGCAACTACGTGCGCG...TTGCAGTGGGAAACCATTCAACTTGAGTTTATTGGAGTTTGCTGTTGTAGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp CTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTCGTATCAAATCCTTTaGGAGGGCTCTTCAGTGTTC +
Preference number: 4 (lower is better)
Translates to: LPRPRAHMLFCTITRTQPSYQIL*EGSSVF
Trigger: GAACACTGAAGAGCCCTCCCAAAGGATTTGATACGA...CGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp CTTTCGGTGAGCACTGAAGCCTGCTGGCTACGGCCAATGGTGGAGGAGACCTCGTGTCATTCCTGTCGTTaGAAGCTTTCCCTGATAGAT +
Preference number: 4 (lower is better)
Translates to: LSVSTEACWLRPMVEETSCHSCR*KLSLID
Trigger: ATCTATCAGGGAAAGCTTCCAACGACAGGAATGACA...CGAGGTCTCCTCCACCATTGGCCGTAGCCAGCAGGCTTCAGTGCTCACCGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp TCCACCAGGCTTCTGCTTCCGGTGGATGCGGGCATGGGACTTCTTATTCACGTACTGAATGAGGCTTTATaGTGGGGTTTCCCACAGACG +
Preference number: 4 (lower is better)
Translates to: STRLLLPVDAGMGLLIHVLNEAL*WGFPQT
Trigger: CGTCTGTGGGAAACCCCACCATAAAGCCTCATTCAG...TACGTGAATAAGAAGTCCCATGCCCGCATCCACCGGAAGCAGAAGCCTGGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp CCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAACTGGGCTCACCTGAATGAGGCTTTATaGTGGGGTTTCCCACAGACG +
Preference number: 4 (lower is better)
Translates to: PTCCSARLPEHSRWNWAHLNEAL*WGFPQT
Trigger: CGTCTGTGGGAAACCCCACCATAAAGCCTCATTCAG...GTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp TTTAATGTCATCGCCCTCCCAGTTCCGGATGGCTTCCGTCAGGATCTGCAGCTCCTGAATGAGGCTTTATaGTGGGGTTTCCCACAGACG +
Preference number: 4 (lower is better)
Translates to: FNVIALPVPDGFRQDLQLLNEAL*WGFPQT
Trigger: CGTCTGTGGGAAACCCCACCATAAAGCCTCATTCAG...GAGCTGCAGATCCTGACGGAAGCCATCCGGAACTGGGAGGGCGATGACATTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR CCA 90 bp CCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAACTGGGCTCACGAGTCTAGGCTTGGTTaGTCATCATCAGCCAAGACG +
Preference number: 4 (lower is better)
Translates to: PTCCSARLPEHSRWNWAHESRLG*SSSAKT
Trigger: CGTCTTGGCTGATGATGACCAACCAAGCCTAGACTC...GTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp GCGGCAGTGCCGTATGGGCCTTCCTTGAGGTCAAGACTGAGTCTGTCAGCCAGCTCAATCCCTCCTGTCTaGATTCATCAGTCATGGTTT +
Preference number: 4 (lower is better)
Translates to: AAVPYGPSLRSRLSLSASSIPPV*IHQSWF
Trigger: AAACCATGACTGATGAATCCAGACAGGAGGGATTGA...GCTGGCTGACAGACTCAGTCTTGACCTCAAGGAAGGCCCATACGGCACTGCCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp TTTGTTGTTACTGAACTAGCCTATACAGAACCGTCTGTGTCCTCCCAAAACGCAGCACGGTGGAGGCCCTaGTGCTGCGGAACGAACCAG +
Preference number: 4 (lower is better)
Translates to: FVVTELAYTEPSVSSQNAARWRP*CCGTNQ
Trigger: CTGGTTCGTTCCGCAGCACCAGGGCCTCCACCGTGC...TGCGTTTTGGGAGGACACAGACGGTTCTGTATAGGCTAGTTCAGTAACAACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp GCGGGCATGGGACTTCTTATTCACGTAGCTGGAAAGGACATTCTAGCATGGGGATCGTCTCCTCTGCACTaGAACACAGTGGGGGAAACG +
Preference number: 4 (lower is better)
Translates to: AGMGLLIHVAGKDILAWGSSPLH*NTVGET
Trigger: CGTTTCCCCCACTGTGTTCCAGTGCAGAGGAGACGA...TCCCCATGCTAGAATGTCCTTTCCAGCTACGTGAATAAGAAGTCCCATGCCCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp TCCCAGAGAAGTGAAGAAATGATTGGCATTAAGGAGTCCACACAACCAGGGCAGAACATGAGGCCCTCATaGCCGCACCGTCCAGGGGAA +
Preference number: 4 (lower is better)
Translates to: SQRSEEMIGIKESTQPGQNMRPS*PHRPGE
Trigger: TTCCCCTGGACGGTGCGGCCATGAGGGCCTCATGTT...CTGCCCTGGTTGTGTGGACTCCTTAATGCCAATCATTTCTTCACTTCTCTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp TATCAAGTTCCCACCCCCTTGGGAGGTCACACGGTGAAACAGACACAGTTATATGACGCCCAGCGCATGTaGACAAGCACAGACGCCACT +
Preference number: 4 (lower is better)
Translates to: YQVPTPLGGHTVKQTQLYDAQRM*TSTDAT
Trigger: AGTGGCGTCTGTGCTTGTCCACATGCGCTGGGCGTC...ATATAACTGTGTCTGTTTCACCGTGTGACCTCCCAAGGGGGTGGGAACTTGATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp CCTCTGCACTGGAACACAGTGGGGGAAACGTTCCCTGCTTATGCCTATGTTACTTGTCAACAGGCGCCCTaGGTGTCCCAGAGAAGTGAA +
Preference number: 4 (lower is better)
Translates to: PLHWNTVGETFPAYAYVTCQQAP*VSQRSE
Trigger: TTCACTTCTCTGGGACACCCAGGGCGCCTGTTGACA...AGTAACATAGGCATAAGCAGGGAACGTTTCCCCCACTGTGTTCCAGTGCAGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp AGAACCGTAAACAGCAACACAACACTCTCCCAAGGTGCCCAGCTCAAAGGCATCTGTCAACAGGCGCCCTaGGTGTCCCAGAGAAGTGAA +
Preference number: 4 (lower is better)
Translates to: RTVNSNTTLSQGAQLKGICQQAP*VSQRSE
Trigger: TTCACTTCTCTGGGACACCCAGGGCGCCTGTTGACA...GATGCCTTTGAGCTGGGCACCTTGGGAGAGTGTTGTGTTGCTGTTTACGGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp TTACGAAGAGCACCCTCGGATGTAGGCTCACGTGAACACACCACCTCCCTCCAACCAGAGTCTCCTCCATaGTTCTGGCACTTAGATCAC +
Preference number: 4 (lower is better)
Translates to: LRRAPSDVGSREHTTSLQPESPP*FWHLDH
Trigger: GTGATCTAAGTGCCAGAACCATGGAGGAGACTCTGG...TTGGAGGGAGGTGGTGTGTTCACGTGAGCCTACATCCGAGGGTGCTCTTCGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp CGATTACCAGAACACAGCCGTTGGAACTGGGCTCACAGCACCTTTGCTGCATATCACAGCCGTTGGAACTaGGCTCACAGCACCTTTGCT +
Preference number: 4 (lower is better)
Translates to: RLPEHSRWNWAHSTFAAYHSRWN*AHSTFA
Trigger: AGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTG...ATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp CTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGCAATTCAGGGAAGTTTaGGGTGAAGATGCGAGTGAA +
Preference number: 4 (lower is better)
Translates to: LPRPRAHMLFCTITRTQPQFREV*GEDASE
Trigger: TTCACTCGCATCTTCACCCCAAACTTCCCTGAATTG...CGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp GAACTGTGCGTGAGGAGGCACAATTCAGGGTTGTTTCTCGAGAACACTCATTGGGCCACGCCTGGAGTCTaGAAGGAGGAGAAGCACCAA +
Preference number: 4 (lower is better)
Translates to: ELCVRRHNSGLFLENTHWATPGV*KEEKHQ
Trigger: TTGGTGCTTCTCCTCCTTCCAGACTCCAGGCGTGGC...CCAATGAGTGTTCTCGAGAAACAACCCTGAATTGTGCCTCCTCACGCACAGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544132.2
3UTR CAA 72 bp AGGTGCTCCACCCATTCCTGCAGATCCTGCTGGTTGTaGCACGACACTAATATCCGCTCAATCATGCTCCCT +
Preference number: 4 (lower is better)
Translates to: RCSTHSCRSCWL*HDTNIRSIMLP
Trigger: AGGGAGCATGATTGAGCGGATATTAGTGTCGTGCAACAACCAGCAGGATCTGCAGGAATGGGTGGAGCACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR TCA 90 bp CCTCTACTACAGTCCAGTAGTCTACACTTGCAGAGGCTGAATGCTTCAGCTTTCAAAGACTTTATGCGGTaGGACGAGGGCCGGGCACAC +
Preference number: 4 (lower is better)
Translates to: PLLQSSSLHLQRLNASAFKDFMR*DEGRAH
Trigger: GTGTGCCCGGCCCTCGTCTCACCGCATAAAGTCTTT...GAAAGCTGAAGCATTCAGCCTCTGCAAGTGTAGACTACTGGACTGTAGTAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp ACATCTAAGAAAAGCAGGCTGCGATACAACAAGCATTTGTTAAGAAAAGCTCAGAGCCGGTCCGGCCGTTaGGTGTGCCCTCCCACCAGC +
Preference number: 4 (lower is better)
Translates to: TSKKSRLRYNKHLLRKAQSRSGR*VCPPTS
Trigger: GCTGGTGGGAGGGCACACTCAACGGCCGGACCGGCT...CTGAGCTTTTCTTAACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp ACCTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCTTCTTGACATTGGGCTaGAAGGTTTTTGAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: TCQGPEPTCCSARLPEHSFLTLG*KVFEGS
Trigger: GCTGCCTTCAAAAACCTTTCAGCCCAATGTCAAGAA...GCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp AGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAACTCTTCCGGACTTCTTaGCATTGGGCTGAAAGGTTT +
Preference number: 4 (lower is better)
Translates to: RPRAHMLFCTITRTQPLELFRTS*HWAERF
Trigger: AAACCTTTCAGCCCAATGTCAAGAAGTCCGGAAGAG...TTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp TTGATGCTACAACTGAATGCAACAGGTCACATTCAGTGCTTTTTGAAGCAGAAAGCTTGCTGGACGGAGTaGCCGGGTGGGAGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: LMLQLNATGHIQCFLKQKACWTE*PGGRGG
Trigger: CCCTCCCCTCCCACCCGGTCACTCCGTCCAGCAAGC...TTTCTGCTTCAAAAAGCACTGAATGTGACCTGTTGCATTCAGTTGTAGCATCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp ACATCTAAGAAAAGCAGGCTGCGATACAACAAGCATTTGTTAAGAAAAGCTCAGGCTTGCTGGACGGAGTaGCCGGGTGGGAGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: TSKKSRLRYNKHLLRKAQACWTE*PGGRGG
Trigger: CCCTCCCCTCCCACCCGGTCACTCCGTCCAGCAAGC...CTGAGCTTTTCTTAACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
ENST00000478679.5
CDS-3UTR TCA 90 bp AGAACCGTAAACAGCAACACAACACTCTCCCAAGGTGCCCAGCTCAAAGGCATCCGCGAACTCCTCATCTaGAGGCTTCCGTTCAGGTTT +
Preference number: 4 (lower is better)
Translates to: RTVNSNTTLSQGAQLKGIRELLI*RLPFRF
Trigger: AAACCTGAACGGAAGCCTTCAGATGAGGAGTTCGCG...GATGCCTTTGAGCTGGGCACCTTGGGAGAGTGTTGTGTTGCTGTTTACGGTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp CGATTACCAGAACACAGCCGTTGGAACTGGGCTCACAGCACCTTTGCTGCATATCGCGAACTCCTCATCTaGAGGCTTCCGTTCAGGTTT +
Preference number: 4 (lower is better)
Translates to: RLPEHSRWNWAHSTFAAYRELLI*RLPFRF
Trigger: AAACCTGAACGGAAGCCTTCAGATGAGGAGTTCGCG...ATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp AAAGTAGAAACAATGGCCCTCTGGATGCCACATCGCCACTGCCACAGGAGAACTCGCGAACTCCTCATCTaGAGGCTTCCGTTCAGGTTT +
Preference number: 4 (lower is better)
Translates to: KVETMALWMPHRHCHRRTRELLI*RLPFRF
Trigger: AAACCTGAACGGAAGCCTTCAGATGAGGAGTTCGCG...AGTTCTCCTGTGGCAGTGGCGATGTGGCATCCAGAGGGCCATTGTTTCTACTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp CTGGGGACTCGGACAGCAACGCTACCGGCTCCGAGAGGACAGTTAATGTCGCCTATGACTTTCAGAATCTaGGCATCTTCTTCCAAAGCA +
Preference number: 4 (lower is better)
Translates to: LGTRTATLPAPRGQLMSPMTFRI*ASSSKA
Trigger: TGCTTTGGAAGAAGATGCTCAGATTCTGAAAGTCAT...AGGCGACATTAACTGTCCTCTCGGAGCCGGTAGCGTTGCTGTCCGAGTCCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp AAAGTAGAAACAATGGCCCTCTGGATGCCACATCGCCACTGCCACAGGAGAACTGTCTTCCGAGAGGTCTaGAGGCTCCAAACGAGAAAG +
Preference number: 4 (lower is better)
Translates to: KVETMALWMPHRHCHRRTVFREV*RLQTRK
Trigger: CTTTCTCGTTTGGAGCCTTCAGACCTCTCGGAAGAC...AGTTCTCCTGTGGCAGTGGCGATGTGGCATCCAGAGGGCCATTGTTTCTACTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp GCGGGCATGGGACTTCTTATTCACGTAGCTGGAAAGGACATTCTAGCATGGGGAGGATTTTACTTTCGGTaGGCACTGAAGCCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: AGMGLLIHVAGKDILAWGGFYFR*ALKPAG
Trigger: GCCAGCAGGCTTCAGTGCTCACCGAAAGTAAAATCC...TCCCCATGCTAGAATGTCCTTTCCAGCTACGTGAATAAGAAGTCCCATGCCCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp AGGGGAAGGGCTGTTAAAAACACAAGTATTCTTGTGAAATACTTCGATCTGAGCCCCAGCGAGCCGCGGTaGGGACAGGCTTCGTCTCCT +
Preference number: 4 (lower is better)
Translates to: RGRAVKNTSILVKYFDLSPSEPR*GQASSP
Trigger: AGGAGACGAAGCCTGTCCTCACCGCGGCTCGCTGGG...GCTCAGATCGAAGTATTTCACAAGAATACTTGTGTTTTTAACAGCCCTTCCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp ACGCCCAGCGCATGTGGACAAGCACAGACGCCACTGAGTGTGAAGGAACGAGCTTCAGAGAGTCAAATCTaGTGCGCAATGAGTTGTTCT +
Preference number: 4 (lower is better)
Translates to: TPSACGQAQTPLSVKERASESQI*CAMSCS
Trigger: AGAACAACTCATTGCGCATCAGATTTGACTCTCTGA...AGCTCGTTCCTTCACACTCAGTGGCGTCTGTGCTTGTCCACATGCGCTGGGCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp GCGGCAGTGCCGTATGGGCCTTCCTTGAGGTCAAGACTGAGTCTGTCAGCCAGCCCAATAAACTCAAGTTaGATGGTTTCCCACTGCAAT +
Preference number: 4 (lower is better)
Translates to: AAVPYGPSLRSRLSLSASPINSS*MVSHCN
Trigger: ATTGCAGTGGGAAACCATTCAACTTGAGTTTATTGG...GCTGGCTGACAGACTCAGTCTTGACCTCAAGGAAGGCCCATACGGCACTGCCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp ACCTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCTGGTGAGAGATATATaGGCAACAGCTCTTACGAGA +
Preference number: 4 (lower is better)
Translates to: TCQGPEPTCCSARLPEHSLVRDI*ATALTR
Trigger: TCTCGTAAGAGCTGTTGCTCATATATCTCTCACCAG...GCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp GCTTGTTCCATGCTGAATGAAGCCACCCAACTTTCTAAACAACGTGCTACTGCCGGATGTAGGCTCACGTaGACACACCACCTCCCTCCA +
Preference number: 4 (lower is better)
Translates to: ACSMLNEATQLSKQRATAGCRLT*THHLPP
Trigger: TGGAGGGAGGTGGTGTGTTCACGTGAGCCTACATCC...GGCAGTAGCACGTTGTTTAGAAAGTTGGGTGGCTTCATTCAGCATGGAACAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp CCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAACTGGGCTCACATGCGAGTGAACATCTaGGCCATGACAGTAAGCTCT +
Preference number: 4 (lower is better)
Translates to: PTCCSARLPEHSRWNWAHMRVNI*AMTVSS
Trigger: AGAGCTTACTGTCATGGCTCAGATGTTCACTCGCAT...GTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp GAACTGTGCGTGAGGAGGCACAATTCAGGGTTGTTTCTCGAGAACACTCATTGGCCTCTGAACTGTGCGTaGGGAGGCACAATTCAGGGT +
Preference number: 4 (lower is better)
Translates to: ELCVRRHNSGLFLENTHWPLNCA*GGTIQG
Trigger: ACCCTGAATTGTGCCTCCTCACGCACAGTTCAGAGG...CCAATGAGTGTTCTCGAGAAACAACCCTGAATTGTGCCTCCTCACGCACAGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544132.2
CDS-3UTR GCA 90 bp ACGGTGGAGGCCCTGGTGCTGCGGAACGAACCAGGCATCCACCAGGCTTCTGCTCTGGAAGTTAAACTTTaGTCTTACTACCAGTTGATT +
Preference number: 4 (lower is better)
Translates to: TVEALVLRNEPGIHQASALEVKL*SYYQLI
Trigger: AATCAACTGGTAGTAAGAGCAAAGTTTAACTTCCAG...AGCAGAAGCCTGGTGGATGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCACCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp GCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGCACCTGGAAGTTAAACTTTaGTCTTACTACCAGTTGATT +
Preference number: 4 (lower is better)
Translates to: AVRWRQALNTRDARPSVHLEVKL*SYYQLI
Trigger: AATCAACTGGTAGTAAGAGCAAAGTTTAACTTCCAG...GTGCACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp AAAGGAAACCAAAAGCAAAGTCCCTGTGGTCACCCTTATTTATTGCTGAAGCAGCCTCGCGCACGTAGTTaGTGGGGAACCAGCCGGTCC +
Preference number: 4 (lower is better)
Translates to: KGNQKQSPCGHPYLLLKQPRARS*WGTSRS
Trigger: GGACCGGCTGGTTCCCCAGCAACTACGTGCGCGAGG...CTGCTTCAGCAATAAATAAGGGTGACCACAGGGACTTTGCTTTTGGTTTCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp CAGAGTTTTAATGTCATCGCCCTCCCAGTTCCGGATGGCTTCCGTCAGGATCTGCGTGAGGACATTCACTaGAGAAGGGTGATTGGCACA +
Preference number: 4 (lower is better)
Translates to: QSFNVIALPVPDGFRQDLREDIH*RRVIGT
Trigger: TGTGCCAATCACCCTTCTGCAGTGAATGTCCTCACG...CAGATCCTGACGGAAGCCATCCGGAACTGGGAGGGCGATGACATTAAAACTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR GCA 90 bp CCTCTGCACTGGAACACAGTGGGGGAAACGTTCCCTGCTTATGCCTATGTTACTGCTTCCGTCAGGATCTaGAGCTCAAGCTCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: PLHWNTVGETFPAYAYVTASVRI*SSSSFL
Trigger: GAGGAAAGAGCTTGAGCTGCAGATCCTGACGGAAGC...AGTAACATAGGCATAAGCAGGGAACGTTTCCCCCACTGTGTTCCAGTGCAGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp GTGGGGAAGAAAGAAATCACGGCCACCTGGAATTACAGCCACCCTGAAGAAGGAGCTTCCGTCAGGATCTaGAGCTCAAGCTCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: VGKKEITATWNYSHPEEGASVRI*SSSSFL
Trigger: GAGGAAAGAGCTTGAGCTGCAGATCCTGACGGAAGC...TCCTTCTTCAGGGTGGCTGTAATTCCAGGTGGCCGTGATTTCTTTCTTCCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp AGAGCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGATATCCGCTCAATCATaGTCCCTGATATTTCAAATG +
Preference number: 4 (lower is better)
Translates to: RAVRWRQALNTRDARPSVISAQS*SLIFQM
Trigger: CATTTGAAATATCAGGGAGCATGATTGAGCGGATAT...CACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp TCCACCAGGCTTCTGCTTCCGGTGGATGCGGGCATGGGACTTCTTATTCACGTAGATCCTGCTGGTTGTTaGACGACACTAATATCCGCT +
Preference number: 4 (lower is better)
Translates to: STRLLLPVDAGMGLLIHVDPAGC*TTLISA
Trigger: AGCGGATATTAGTGTCGTGCAACAACCAGCAGGATC...TACGTGAATAAGAAGTCCCATGCCCGCATCCACCGGAAGCAGAAGCCTGGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp CATCTGAGCCATGACAGTAAGCTCTGCCTTTGGAAAGGAGAGCTCCCACTTCACGACGTGACCTTCGTTTaGTTCTGTAGGTGCTCCACC +
Preference number: 4 (lower is better)
Translates to: HLSHDSKLCLWKGELPLHDVTFV*FCRCST
Trigger: GGTGGAGCACCTACAGAAGCAAACGAAGGTCACGTC...GTGAAGTGGGAGCTCTCCTTTCCAAAGGCAGAGCTTACTGTCATGGCTCAGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp AGAACCGTAAACAGCAACACAACACTCTCCCAAGGTGCCCAGCTCAAAGGCATCGACGTGACCTTCGTTTaGTTCTGTAGGTGCTCCACC +
Preference number: 4 (lower is better)
Translates to: RTVNSNTTLSQGAQLKGIDVTFV*FCRCST
Trigger: GGTGGAGCACCTACAGAAGCAAACGAAGGTCACGTC...GATGCCTTTGAGCTGGGCACCTTGGGAGAGTGTTGTGTTGCTGTTTACGGTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp CGATTACCAGAACACAGCCGTTGGAACTGGGCTCACAGCACCTTTGCTGCATATGACGTGACCTTCGTTTaGTTCTGTAGGTGCTCCACC +
Preference number: 4 (lower is better)
Translates to: RLPEHSRWNWAHSTFAAYDVTFV*FCRCST
Trigger: GGTGGAGCACCTACAGAAGCAAACGAAGGTCACGTC...ATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp GGACATGTAAGTGACGTTGCCCAGAGTTTTAATGTCATCGCCCTCCCAGTTCCGGACGTGACCTTCGTTTaGTTCTGTAGGTGCTCCACC +
Preference number: 4 (lower is better)
Translates to: GHVSDVAQSFNVIALPVPDVTFV*FCRCST
Trigger: GGTGGAGCACCTACAGAAGCAAACGAAGGTCACGTC...CGGAACTGGGAGGGCGATGACATTAAAACTCTGGGCAACGTCACTTACATGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR GCA 90 bp GTGGGGAAGAAAGAAATCACGGCCACCTGGAATTACAGCCACCCTGAAGAAGGAGCTTCCGTTCAGGTTTaGGCTTGGGCAGCAGCTTTT +
Preference number: 4 (lower is better)
Translates to: VGKKEITATWNYSHPEEGASVQV*AWAAAF
Trigger: AAAAGCTGCTGCCCAAGCGCAAACCTGAACGGAAGC...TCCTTCTTCAGGGTGGCTGTAATTCCAGGTGGCCGTGATTTCTTTCTTCCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp CTTCTTATTCACGTAGCTGGAAAGGACATTCTAGCATGGGGATTAGCCCGGACAGACTTGGGTCAGGGGTaGCCAGCTTCACCTCAGAAC +
Preference number: 4 (lower is better)
Translates to: LLIHVAGKDILAWGLARTDLGQG*PASPQN
Trigger: GTTCTGAGGTGAAGCTGGGCACCCCTGACCCAAGTC...TGTCCGGGCTAATCCCCATGCTAGAATGTCCTTTCCAGCTACGTGAATAAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp GCGGGCATGGGACTTCTTATTCACGTAGCTGGAAAGGACATTCTAGCATGGGGATCTGCTTCCGGTGGATaGGGGCATGGGACTTCTTAT +
Preference number: 4 (lower is better)
Translates to: AGMGLLIHVAGKDILAWGSASGG*GHGTSY
Trigger: ATAAGAAGTCCCATGCCCGCATCCACCGGAAGCAGA...TCCCCATGCTAGAATGTCCTTTCCAGCTACGTGAATAAGAAGTCCCATGCCCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp GTGTATTTTGTTGTTACTGAACTAGCCTATACAGAACCGTCTGTGTCCTCCCAACGGTGGAGGCCCTGGTaGTGCGGAACGAACCAGGCA +
Preference number: 4 (lower is better)
Translates to: VYFVVTELAYTEPSVSSQRWRPW*CGTNQA
Trigger: TGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCACCG...TTGGGAGGACACAGACGGTTCTGTATAGGCTAGTTCAGTAACAACAAAATACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp CCTGCTACAACAGCAAACTCCAATAAACTCAAGTTGAATGGTTTCCCACTGCAACGGTGGAGGCCCTGGTaGTGCGGAACGAACCAGGCA +
Preference number: 4 (lower is better)
Translates to: PATTANSNKLKLNGFPLQRWRPW*CGTNQA
Trigger: TGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCACCG...TTGCAGTGGGAAACCATTCAACTTGAGTTTATTGGAGTTTGCTGTTGTAGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp AGAACCGTAAACAGCAACACAACACTCTCCCAAGGTGCCCAGCTCAAAGGCATCCCATCAGTATCAGCCTaGAGCATGGCCTCCATCTGT +
Preference number: 4 (lower is better)
Translates to: RTVNSNTTLSQGAQLKGIPSVSA*SMASIC
Trigger: ACAGATGGAGGCCATGCTGCAGGCTGATACTGATGG...GATGCCTTTGAGCTGGGCACCTTGGGAGAGTGTTGTGTTGCTGTTTACGGTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp TCAGGTCCTCAGAGTCAATCCCTCCTGTCTGGATTCATCAGTCATGGTTTGATCGCATTAAGGCAGGTCTaGAGGAGATCCGTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: SGPQSQSLLSGFISHGLIALRQV*RRSVLG
Trigger: CCCCAGGACGGATCTCCTGCAGACCTGCCTTAATGC...GATCAAACCATGACTGATGAATCCAGACAGGAGGGATTGACTCTGAGGACCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp ATAGTCAGTCATTCGAATGTATACTCGCATCGGCAGTTAAGCCTCCACAAAGTAGGGCCTGCGCGACTCTaGTCTAGACGGACGGTGACG +
Preference number: 4 (lower is better)
Translates to: IVSHSNVYSHRQLSLHKVGPARL*SRRTVT
Trigger: CGTCACCGTCCGTCTAGAGCAGAGTCGCGCAGGCCC...TACTTTGTGGAGGCTTAACTGCCGATGCGAGTATACATTCGAATGACTGACTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317133.9
CDS-3UTR GCA 90 bp CATCTGAGCCATGACAGTAAGCTCTGCCTTTGGAAAGGAGAGCTCCCACTTCACAGCCACGTAACGGTTTaGTCGGCGGAATTCATCGCT +
Preference number: 4 (lower is better)
Translates to: HLSHDSKLCLWKGELPLHSHVTV*SAEFIA
Trigger: AGCGATGAATTCCGCCGAGCAAACCGTTACGTGGCT...GTGAAGTGGGAGCTCTCCTTTCCAAAGGCAGAGCTTACTGTCATGGCTCAGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317133.9
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp AGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAACATGACAGTAAGCTCTaGCTTTGGAAAGGAGAGCTC +
Preference number: 4 (lower is better)
Translates to: RPRAHMLFCTITRTQPLEHDSKL*LWKGEL
Trigger: GAGCTCTCCTTTCCAAAGGCAGAGCTTACTGTCATG...TTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp TTACGAAGAGCACCCTCGGATGTAGGCTCACGTGAACACACCACCTCCCTCCAACATGACAGTAAGCTCTaGCTTTGGAAAGGAGAGCTC +
Preference number: 4 (lower is better)
Translates to: LRRAPSDVGSREHTTSLQHDSKL*LWKGEL
Trigger: GAGCTCTCCTTTCCAAAGGCAGAGCTTACTGTCATG...TTGGAGGGAGGTGGTGTGTTCACGTGAGCCTACATCCGAGGGTGCTCTTCGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp TTACGAAGAGCACCCTCGGATGTAGGCTCACGTGAACACACCACCTCCCTCCAACTTGCAGAGGCTGAATaGTTCAGCTTTCGGGCTTTA +
Preference number: 4 (lower is better)
Translates to: LRRAPSDVGSREHTTSLQLAEAE*FSFRAL
Trigger: TAAAGCCCGAAAGCTGAAGCATTCAGCCTCTGCAAG...TTGGAGGGAGGTGGTGTGTTCACGTGAGCCTACATCCGAGGGTGCTCTTCGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp GCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGCACAAACAAACACTTCATTaGCATATGCAACCACAAACA +
Preference number: 4 (lower is better)
Translates to: AVRWRQALNTRDARPSVHKQTLH*HMQPQT
Trigger: TGTTTGTGGTTGCATATGGCAATGAAGTGTTTGTTT...GTGCACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp GCGGCAGTGCCGTATGGGCCTTCCTTGAGGTCAAGACTGAGTCTGTCAGCCAGCTCCTCATTGGTCTGCTaGAAGTTAAACTTTGCTCTT +
Preference number: 4 (lower is better)
Translates to: AAVPYGPSLRSRLSLSASSSLVC*KLNFAL
Trigger: AAGAGCAAAGTTTAACTTCCAGCAGACCAATGAGGA...GCTGGCTGACAGACTCAGTCTTGACCTCAAGGAAGGCCCATACGGCACTGCCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp ACCTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCTCGTATCAAATCCTTTaGGAGGGCTCTTCAGTGTTC +
Preference number: 4 (lower is better)
Translates to: TCQGPEPTCCSARLPEHSSYQIL*EGSSVF
Trigger: GAACACTGAAGAGCCCTCCCAAAGGATTTGATACGA...GCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp TCAGGTCCTCAGAGTCAATCCCTCCTGTCTGGATTCATCAGTCATGGTTTGATCGTTTGCTCAGGCCCGTaGTCAGCACGAGAATCCCAG +
Preference number: 4 (lower is better)
Translates to: SGPQSQSLLSGFISHGLIVCSGP*SARESQ
Trigger: CTGGGATTCTCGTGCTGACCACGGGCCTGAGCAAAC...GATCAAACCATGACTGATGAATCCAGACAGGAGGGATTGACTCTGAGGACCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp TCCCAGAGAAGTGAAGAAATGATTGGCATTAAGGAGTCCACACAACCAGGGCAGGTTTGCTCAGGCCCGTaGTCAGCACGAGAATCCCAG +
Preference number: 4 (lower is better)
Translates to: SQRSEEMIGIKESTQPGQVCSGP*SARESQ
Trigger: CTGGGATTCTCGTGCTGACCACGGGCCTGAGCAAAC...CTGCCCTGGTTGTGTGGACTCCTTAATGCCAATCATTTCTTCACTTCTCTGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp ACGCCCAGCGCATGTGGACAAGCACAGACGCCACTGAGTGTGAAGGAACGAGCTTGTCATTCCTGTCGTTaGAAGCTTTCCCTGATAGAT +
Preference number: 4 (lower is better)
Translates to: TPSACGQAQTPLSVKERACHSCR*KLSLID
Trigger: ATCTATCAGGGAAAGCTTCCAACGACAGGAATGACA...AGCTCGTTCCTTCACACTCAGTGGCGTCTGTGCTTGTCCACATGCGCTGGGCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp TTACGAAGAGCACCCTCGGATGTAGGCTCACGTGAACACACCACCTCCCTCCAATCCTGCAGATCCTGCTaGTTGTTGCACGACACTAAT +
Preference number: 4 (lower is better)
Translates to: LRRAPSDVGSREHTTSLQSCRSC*LLHDTN
Trigger: ATTAGTGTCGTGCAACAACCAGCAGGATCTGCAGGA...TTGGAGGGAGGTGGTGTGTTCACGTGAGCCTACATCCGAGGGTGCTCTTCGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp CCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAACTGGGCTCACTCCTGCAGATCCTGCTaGTTGTTGCACGACACTAAT +
Preference number: 4 (lower is better)
Translates to: PTCCSARLPEHSRWNWAHSCRSC*LLHDTN
Trigger: ATTAGTGTCGTGCAACAACCAGCAGGATCTGCAGGA...GTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp TCAGGTCCTCAGAGTCAATCCCTCCTGTCTGGATTCATCAGTCATGGTTTGATCTCAGGCTCCAGGGCTTaGGTGTTTTCGGAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: SGPQSQSLLSGFISHGLISGSRA*VFSEAP
Trigger: TGGAGCCTCCGAAAACACCCAAGCCCTGGAGCCTGA...GATCAAACCATGACTGATGAATCCAGACAGGAGGGATTGACTCTGAGGACCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp CTTTCGGTGAGCACTGAAGCCTGCTGGCTACGGCCAATGGTGGAGGAGACCTCGAAAGCAAAGTCCCTGTaGTCACCCTTATTTATTGCT +
Preference number: 4 (lower is better)
Translates to: LSVSTEACWLRPMVEETSKAKSL*SPLFIA
Trigger: AGCAATAAATAAGGGTGACCACAGGGACTTTGCTTT...CGAGGTCTCCTCCACCATTGGCCGTAGCCAGCAGGCTTCAGTGCTCACCGAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp GCGGCAGTGCCGTATGGGCCTTCCTTGAGGTCAAGACTGAGTCTGTCAGCCAGCAAAGCAAAGTCCCTGTaGTCACCCTTATTTATTGCT +
Preference number: 4 (lower is better)
Translates to: AAVPYGPSLRSRLSLSASKAKSL*SPLFIA
Trigger: AGCAATAAATAAGGGTGACCACAGGGACTTTGCTTT...GCTGGCTGACAGACTCAGTCTTGACCTCAAGGAAGGCCCATACGGCACTGCCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp CATCTGAGCCATGACAGTAAGCTCTGCCTTTGGAAAGGAGAGCTCCCACTTCACCACAGAGCCGTGAGGTaGAGACAAGCTCTGAACACA +
Preference number: 4 (lower is better)
Translates to: HLSHDSKLCLWKGELPLHHRAVR*RQALNT
Trigger: TGTGTTCAGAGCTTGTCTCCACCTCACGGCTCTGTG...GTGAAGTGGGAGCTCTCCTTTCCAAAGGCAGAGCTTACTGTCATGGCTCAGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp CCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAACTGGGCTCACTGGGGTTGCTGTAAATaGAGTTTCACTGCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: PTCCSARLPEHSRWNWAHWGCCK*SFTAAG
Trigger: ACCAGCTGCAGTGAAACTCCATTTACAGCAACCCCA...GTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp CGATTACCAGAACACAGCCGTTGGAACTGGGCTCACAGCACCTTTGCTGCATATGGTTTGGCGAAGGAGTaGGCAGTGGGGAAGAAAGAA +
Preference number: 4 (lower is better)
Translates to: RLPEHSRWNWAHSTFAAYGLAKE*AVGKKE
Trigger: TTCTTTCTTCCCCACTGCCCACTCCTTCGCCAAACC...ATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp CCATTAGCTTGTTCCATGCTGAATGAAGCCACCCAACTTTCTAAACAACGTGCTGCTCCCTGGCAGCTCTaGGCTTGTGAGCAGCAGGAC +
Preference number: 4 (lower is better)
Translates to: PLACSMLNEATQLSKQRAAPWQL*ACEQQD
Trigger: GTCCTGCTGCTCACAAGCCCAGAGCTGCCAGGGAGC...AGCACGTTGTTTAGAAAGTTGGGTGGCTTCATTCAGCATGGAACAAGCTAATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp CCATTAGCTTGTTCCATGCTGAATGAAGCCACCCAACTTTCTAAACAACGTGCTCTGCCAGGAGCTCCCTaGCAGCTCTGGGCTTGTGAG +
Preference number: 4 (lower is better)
Translates to: PLACSMLNEATQLSKQRALPGAP*QLWACE
Trigger: CTCACAAGCCCAGAGCTGCCAGGGAGCTCCTGGCAG...AGCACGTTGTTTAGAAAGTTGGGTGGCTTCATTCAGCATGGAACAAGCTAATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp ACAGGCTTCGTCTCCTCTGCACTGGAACACAGTGGGGGAAACGTTCCCTGCTTAAGTGTGCAAAGACTGTaGTCCAAGGGAGTCAAAAGA +
Preference number: 4 (lower is better)
Translates to: TGFVSSALEHSGGNVPCLSVQRL*SKGVKR
Trigger: TCTTTTGACTCCCTTGGATCACAGTCTTTGCACACT...TAAGCAGGGAACGTTTCCCCCACTGTGTTCCAGTGCAGAGGAGACGAAGCCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp ATCGCCCTCCCAGTTCCGGATGGCTTCCGTCAGGATCTGCAGCTCAAGCTCTTTGCTCTTACTACCAGTTaGTTGTTGCTATTATCGGTC +
Preference number: 4 (lower is better)
Translates to: IALPVPDGFRQDLQLKLFALTTS*LLLLSV
Trigger: GACCGATAATAGCAACAATCAACTGGTAGTAAGAGC...AAAGAGCTTGAGCTGCAGATCCTGACGGAAGCCATCCGGAACTGGGAGGGCGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR TCA 90 bp GACCTGGGACATGTAAGTGACGTTGCCCAGAGTTTTAATGTCATCGCCCTCCCAGATGACGTCTCCTTTTaGGAAGGAAAGCTCGTCCTC +
Preference number: 4 (lower is better)
Translates to: DLGHVSDVAQSFNVIALPDDVSF*EGKLVL
Trigger: GAGGACGAGCTTTCCTTCTCAAAAGGAGACGTCATC...TGGGAGGGCGATGACATTAAAACTCTGGGCAACGTCACTTACATGTCCCAGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR TCA 90 bp AAACAATGGCCCTCTGGATGCCACATCGCCACTGCCACAGGAGAACTGTCTTTTTTCACTGCAGAAGGGTaGTTGGCACAATACGTGAGG +
Preference number: 4 (lower is better)
Translates to: KQWPSGCHIATATGELSFFTAEG*LAQYVR
Trigger: CCTCACGTATTGTGCCAATCACCCTTCTGCAGTGAA...AAAAGACAGTTCTCCTGTGGCAGTGGCGATGTGGCATCCAGAGGGCCATTGTTT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp GGACATGTAAGTGACGTTGCCCAGAGTTTTAATGTCATCGCCCTCCCAGTTCCGTTCACTGCAGAAGGGTaGTTGGCACAATACGTGAGG +
Preference number: 4 (lower is better)
Translates to: GHVSDVAQSFNVIALPVPFTAEG*LAQYVR
Trigger: CCTCACGTATTGTGCCAATCACCCTTCTGCAGTGAA...CGGAACTGGGAGGGCGATGACATTAAAACTCTGGGCAACGTCACTTACATGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR TCA 90 bp TCAGGTCCTCAGAGTCAATCCCTCCTGTCTGGATTCATCAGTCATGGTTTGATCCACCTTTGGTCTCCATaGACTCCCCCAACTCCTCAC +
Preference number: 4 (lower is better)
Translates to: SGPQSQSLLSGFISHGLIHLWSP*TPPTPH
Trigger: GTGAGGAGTTGGGGGAGTTCATGGAGACCAAAGGTG...GATCAAACCATGACTGATGAATCCAGACAGGAGGGATTGACTCTGAGGACCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp CTTCTTATTCACGTAGCTGGAAAGGACATTCTAGCATGGGGATTAGCCCGGACACACCTTTGGTCTCCATaGACTCCCCCAACTCCTCAC +
Preference number: 4 (lower is better)
Translates to: LLIHVAGKDILAWGLARTHLWSP*TPPTPH
Trigger: GTGAGGAGTTGGGGGAGTTCATGGAGACCAAAGGTG...TGTCCGGGCTAATCCCCATGCTAGAATGTCCTTTCCAGCTACGTGAATAAGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp AGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAAGGGCTGAAAGGTTTTTaGAGGCAGCCATGGATTTTT +
Preference number: 4 (lower is better)
Translates to: RPRAHMLFCTITRTQPLEGLKGF*RQPWIF
Trigger: AAAAATCCATGGCTGCCTTCAAAAACCTTTCAGCCC...TTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp TTTAATGTCATCGCCCTCCCAGTTCCGGATGGCTTCCGTCAGGATCTGCAGCTCGGGCTGAAAGGTTTTTaGAGGCAGCCATGGATTTTT +
Preference number: 4 (lower is better)
Translates to: FNVIALPVPDGFRQDLQLGLKGF*RQPWIF
Trigger: AAAAATCCATGGCTGCCTTCAAAAACCTTTCAGCCC...GAGCTGCAGATCCTGACGGAAGCCATCCGGAACTGGGAGGGCGATGACATTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR TCA 90 bp CCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAACTGGGCTCACTTCTTGACATTGGGCTaGAAGGTTTTTGAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: PTCCSARLPEHSRWNWAHFLTLG*KVFEGS
Trigger: GCTGCCTTCAAAAACCTTTCAGCCCAATGTCAAGAA...GTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp TCCACCAGGCTTCTGCTTCCGGTGGATGCGGGCATGGGACTTCTTATTCACGTATTCTTGACATTGGGCTaGAAGGTTTTTGAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: STRLLLPVDAGMGLLIHVFLTLG*KVFEGS
Trigger: GCTGCCTTCAAAAACCTTTCAGCCCAATGTCAAGAA...TACGTGAATAAGAAGTCCCATGCCCGCATCCACCGGAAGCAGAAGCCTGGTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp TTTAATGTCATCGCCCTCCCAGTTCCGGATGGCTTCCGTCAGGATCTGCAGCTCTTCTTGACATTGGGCTaGAAGGTTTTTGAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: FNVIALPVPDGFRQDLQLFLTLG*KVFEGS
Trigger: GCTGCCTTCAAAAACCTTTCAGCCCAATGTCAAGAA...GAGCTGCAGATCCTGACGGAAGCCATCCGGAACTGGGAGGGCGATGACATTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR TCA 90 bp CCTCTACTACAGTCCAGTAGTCTACACTTGCAGAGGCTGAATGCTTCAGCTTTCTCACTTCCGGCACACTaGATCAGGACCTGGGACATG +
Preference number: 4 (lower is better)
Translates to: PLLQSSSLHLQRLNASAFSLPAH*IRTWDM
Trigger: CATGTCCCAGGTCCTGATTCAGTGTGCCGGAAGTGA...GAAAGCTGAAGCATTCAGCCTCTGCAAGTGTAGACTACTGGACTGTAGTAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp GGCACACTGAATCAGGACCTGGGACATGTAAGTGACGTTGCCCAGAGTTTTAATTCACTTCCGGCACACTaGATCAGGACCTGGGACATG +
Preference number: 4 (lower is better)
Translates to: GTLNQDLGHVSDVAQSFNSLPAH*IRTWDM
Trigger: CATGTCCCAGGTCCTGATTCAGTGTGCCGGAAGTGA...ATTAAAACTCTGGGCAACGTCACTTACATGTCCCAGGTCCTGATTCAGTGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR TCA 90 bp GTGGGGAAGAAAGAAATCACGGCCACCTGGAATTACAGCCACCCTGAAGAAGGAGGTTTCCCACAGACGTaGCCTTCGTTTGCTTCTGTA +
Preference number: 4 (lower is better)
Translates to: VGKKEITATWNYSHPEEGGFPQT*PSFASV
Trigger: TACAGAAGCAAACGAAGGTCACGTCTGTGGGAAACC...TCCTTCTTCAGGGTGGCTGTAATTCCAGGTGGCCGTGATTTCTTTCTTCCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp CGATTACCAGAACACAGCCGTTGGAACTGGGCTCACAGCACCTTTGCTGCATATGGTATGAGATGGCACTaGATGAGGCTTTATGGTGGG +
Preference number: 4 (lower is better)
Translates to: RLPEHSRWNWAHSTFAAYGMRWH*MRLYGG
Trigger: CCCACCATAAAGCCTCATTCAGTGCCATCTCATACC...ATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp GTGGGGAAGAAAGAAATCACGGCCACCTGGAATTACAGCCACCCTGAAGAAGGAGGTATGAGATGGCACTaGATGAGGCTTTATGGTGGG +
Preference number: 4 (lower is better)
Translates to: VGKKEITATWNYSHPEEGGMRWH*MRLYGG
Trigger: CCCACCATAAAGCCTCATTCAGTGCCATCTCATACC...TCCTTCTTCAGGGTGGCTGTAATTCCAGGTGGCCGTGATTTCTTTCTTCCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp AGCACCTCTGAACTGTGCGTGAGGAGGCACAATTCAGGGTTGTTTCTCGAGAACGGTATGAGATGGCACTaGATGAGGCTTTATGGTGGG +
Preference number: 4 (lower is better)
Translates to: STSELCVRRHNSGLFLENGMRWH*MRLYGG
Trigger: CCCACCATAAAGCCTCATTCAGTGCCATCTCATACC...GTTCTCGAGAAACAACCCTGAATTGTGCCTCCTCACGCACAGTTCAGAGGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544132.2
CDS-3UTR TCA 90 bp ACGCCCAGCGCATGTGGACAAGCACAGACGCCACTGAGTGTGAAGGAACGAGCTTGCAGTAAGCTTCAATaGCTTTCAGAATCTGAGCAT +
Preference number: 4 (lower is better)
Translates to: TPSACGQAQTPLSVKERACSKLQ*LSESEH
Trigger: ATGCTCAGATTCTGAAAGTCATTGAAGCTTACTGCA...AGCTCGTTCCTTCACACTCAGTGGCGTCTGTGCTTGTCCACATGCGCTGGGCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp AGGGGAAGGGCTGTTAAAAACACAAGTATTCTTGTGAAATACTTCGATCTGAGCCCTGCCCTGTGGTCCTaGGTGCACCCCGACTTGGGT +
Preference number: 4 (lower is better)
Translates to: RGRAVKNTSILVKYFDLSPALWS*VHPDLG
Trigger: ACCCAAGTCGGGGTGCACTCAGGACCACAGGGCAGG...GCTCAGATCGAAGTATTTCACAAGAATACTTGTGTTTTTAACAGCCCTTCCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp CTTTCGGTGAGCACTGAAGCCTGCTGGCTACGGCCAATGGTGGAGGAGACCTCGGTATTTTGTTGTTACTaGACTAGCCTATACAGAACC +
Preference number: 4 (lower is better)
Translates to: LSVSTEACWLRPMVEETSVFCCY*TSLYRT
Trigger: GGTTCTGTATAGGCTAGTTCAGTAACAACAAAATAC...CGAGGTCTCCTCCACCATTGGCCGTAGCCAGCAGGCTTCAGTGCTCACCGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp CTGGGGACTCGGACAGCAACGCTACCGGCTCCGAGAGGACAGTTAATGTCGCCTTTGCTTTATTCTTGCTaGAGGAGGGGATTTTACTTT +
Preference number: 4 (lower is better)
Translates to: LGTRTATLPAPRGQLMSPLLYSC*RRGFYF
Trigger: AAAGTAAAATCCCCTCCTTCAGCAAGAATAAAGCAA...AGGCGACATTAACTGTCCTCTCGGAGCCGGTAGCGTTGCTGTCCGAGTCCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp AAAACAGTGTATTTTGTTGTTACTGAACTAGCCTATACAGAACCGTCTGTGTCCCCCAGCGAGCCGCGGTaGGGACAGGCTTCGTCTCCT +
Preference number: 4 (lower is better)
Translates to: KTVYFVVTELAYTEPSVSPSEPR*GQASSP
Trigger: AGGAGACGAAGCCTGTCCTCACCGCGGCTCGCTGGG...GGACACAGACGGTTCTGTATAGGCTAGTTCAGTAACAACAAAATACACTGTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp AGAACACAGCCGTTGGAACTGGGCTCACAGCACCTTTGCTGCATATATTCTTCTGAAGCCATATGGGTCTaGATCGGGAGGAACCGACTC +
Preference number: 4 (lower is better)
Translates to: RTQPLELGSQHLCCIYSSEAIWV*IGRNRL
Trigger: GAGTCGGTTCCTCCCGATTCAGACCCATATGGCTTC...AGAAGAATATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317133.9
CDS-3UTR TCA 90 bp TTACGAAGAGCACCCTCGGATGTAGGCTCACGTGAACACACCACCTCCCTCCAACTGGTGAGAGATATATaGGCAACAGCTCTTACGAGA +
Preference number: 4 (lower is better)
Translates to: LRRAPSDVGSREHTTSLQLVRDI*ATALTR
Trigger: TCTCGTAAGAGCTGTTGCTCATATATCTCTCACCAG...TTGGAGGGAGGTGGTGTGTTCACGTGAGCCTACATCCGAGGGTGCTCTTCGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp TTACGAAGAGCACCCTCGGATGTAGGCTCACGTGAACACACCACCTCCCTCCAAATTAACACTGGGCTCTaGCTGCTCCTCAATGTTCTT +
Preference number: 4 (lower is better)
Translates to: LRRAPSDVGSREHTTSLQINTGL*LLLNVL
Trigger: AAGAACATTGAGGAGCAGTCAGAGCCCAGTGTTAAT...TTGGAGGGAGGTGGTGTGTTCACGTGAGCCTACATCCGAGGGTGCTCTTCGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp TTACGAAGAGCACCCTCGGATGTAGGCTCACGTGAACACACCACCTCCCTCCAATTTGAAGTCCGAGTGTaGAAAGACTGTGATCCAAGG +
Preference number: 4 (lower is better)
Translates to: LRRAPSDVGSREHTTSLQFEVRV*KDCDPR
Trigger: CCTTGGATCACAGTCTTTGCACACTCGGACTTCAAA...TTGGAGGGAGGTGGTGTGTTCACGTGAGCCTACATCCGAGGGTGCTCTTCGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp CTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGCTACCAGTTGATTGTTaGTATTATCGGTCATGTCCA +
Preference number: 4 (lower is better)
Translates to: LPRPRAHMLFCTITRTQPLPVDC*YYRSCP
Trigger: TGGACATGACCGATAATAGCAACAATCAACTGGTAG...CGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp GGATTTGATGCTACAACTGAATGCAACAGGTCACATTCAGTGCTTTTTGAAGCACCTCGCGCACGTAGTTaGTGGGGAACCAGCCGGTCC +
Preference number: 4 (lower is better)
Translates to: GFDATTECNRSHSVLFEAPRARS*WGTSRS
Trigger: GGACCGGCTGGTTCCCCAGCAACTACGTGCGCGAGG...TGCTTCAAAAAGCACTGAATGTGACCTGTTGCATTCAGTTGTAGCATCAAATCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp CATCTGAGCCATGACAGTAAGCTCTGCCTTTGGAAAGGAGAGCTCCCACTTCACCGTGAGGACATTCACTaGAGAAGGGTGATTGGCACA +
Preference number: 4 (lower is better)
Translates to: HLSHDSKLCLWKGELPLHREDIH*RRVIGT
Trigger: TGTGCCAATCACCCTTCTGCAGTGAATGTCCTCACG...GTGAAGTGGGAGCTCTCCTTTCCAAAGGCAGAGCTTACTGTCATGGCTCAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp CCTCTGCACTGGAACACAGTGGGGGAAACGTTCCCTGCTTATGCCTATGTTACTCGTGAGGACATTCACTaGAGAAGGGTGATTGGCACA +
Preference number: 4 (lower is better)
Translates to: PLHWNTVGETFPAYAYVTREDIH*RRVIGT
Trigger: TGTGCCAATCACCCTTCTGCAGTGAATGTCCTCACG...AGTAACATAGGCATAAGCAGGGAACGTTTCCCCCACTGTGTTCCAGTGCAGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp GACCTGGGACATGTAAGTGACGTTGCCCAGAGTTTTAATGTCATCGCCCTCCCAGTTTGCTTCTGTAGGTaGTCCACCCATTCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: DLGHVSDVAQSFNVIALPVCFCR*STHSCR
Trigger: TCTGCAGGAATGGGTGGAGCACCTACAGAAGCAAAC...TGGGAGGGCGATGACATTAAAACTCTGGGCAACGTCACTTACATGTCCCAGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR GCA 90 bp CCATTAGCTTGTTCCATGCTGAATGAAGCCACCCAACTTTCTAAACAACGTGCTGGCTTGCTGTCTGCGTaGTTGCTGGACGGAGTGACC +
Preference number: 4 (lower is better)
Translates to: PLACSMLNEATQLSKQRAGLLSA*LLDGVT
Trigger: GGTCACTCCGTCCAGCAAGCACGCAGACAGCAAGCC...AGCACGTTGTTTAGAAAGTTGGGTGGCTTCATTCAGCATGGAACAAGCTAATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp GTGTATTTTGTTGTTACTGAACTAGCCTATACAGAACCGTCTGTGTCCTCCCAACGCGGGCTTGCTGTCTaGGTGCTTGCTGGACGGAGT +
Preference number: 4 (lower is better)
Translates to: VYFVVTELAYTEPSVSSQRGLAV*VLAGRS
Trigger: ACTCCGTCCAGCAAGCACGCAGACAGCAAGCCCGCG...TTGGGAGGACACAGACGGTTCTGTATAGGCTAGTTCAGTAACAACAAAATACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp CCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAACTGGGCTCACGTTGAATTGAGTGTTTaGCTTGTTTTGGCGCTGGTG +
Preference number: 4 (lower is better)
Translates to: PTCCSARLPEHSRWNWAHVELSV*LVLALV
Trigger: CACCAGCGCCAAAACAAGGCAAACACTCAATTCAAC...GTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp TTTGTTGTTACTGAACTAGCCTATACAGAACCGTCTGTGTCCTCCCAAAACGCAAGCAGAACGAAAACCTaGTCCACGGGCCGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: FVVTELAYTEPSVSSQNASRTKT*STGRAS
Trigger: GGAAGCCCGGCCCGTGGAGCAGGTTTTCGTTCTGCT...TGCGTTTTGGGAGGACACAGACGGTTCTGTATAGGCTAGTTCAGTAACAACAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp CATCTGAGCCATGACAGTAAGCTCTGCCTTTGGAAAGGAGAGCTCCCACTTCACTTCGCTTTGCTACCTTaGAAGCCGGTCATGACGGAA +
Preference number: 4 (lower is better)
Translates to: HLSHDSKLCLWKGELPLHFALLP*KPVMTE
Trigger: TTCCGTCATGACCGGCTTGCAAGGTAGCAAAGCGAA...GTGAAGTGGGAGCTCTCCTTTCCAAAGGCAGAGCTTACTGTCATGGCTCAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317133.9
CDS-3UTR GCA 90 bp CATCTGAGCCATGACAGTAAGCTCTGCCTTTGGAAAGGAGAGCTCCCACTTCACGCCCACATGCTGTTCTaGACGATTACCAGAACACAG +
Preference number: 4 (lower is better)
Translates to: HLSHDSKLCLWKGELPLHAHMLF*TITRTQ
Trigger: CTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGC...GTGAAGTGGGAGCTCTCCTTTCCAAAGGCAGAGCTTACTGTCATGGCTCAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp GTGGGGAAGAAAGAAATCACGGCCACCTGGAATTACAGCCACCCTGAAGAAGGAGCCCACATGCTGTTCTaGACGATTACCAGAACACAG +
Preference number: 4 (lower is better)
Translates to: VGKKEITATWNYSHPEEGAHMLF*TITRTQ
Trigger: CTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGC...TCCTTCTTCAGGGTGGCTGTAATTCCAGGTGGCCGTGATTTCTTTCTTCCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp CCTCTACTACAGTCCAGTAGTCTACACTTGCAGAGGCTGAATGCTTCAGCTTTCGGCCCAGAGCCCACATaGTGTTCTGCACGATTACCA +
Preference number: 4 (lower is better)
Translates to: PLLQSSSLHLQRLNASAFGPEPT*CSARLP
Trigger: TGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCC...GAAAGCTGAAGCATTCAGCCTCTGCAAGTGTAGACTACTGGACTGTAGTAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp ACCTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCGATGCTACAACTGAATaGAACAGGTCACATTCAGTG +
Preference number: 4 (lower is better)
Translates to: TCQGPEPTCCSARLPEHSDATTE*NRSHSV
Trigger: CACTGAATGTGACCTGTTGCATTCAGTTGTAGCATC...GCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp ACCTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCACACCAAATAGAGCGTaGATGGGACAGAACACAATT +
Preference number: 4 (lower is better)
Translates to: TCQGPEPTCCSARLPEHSTPNRA*MGQNTI
Trigger: AATTGTGTTCTGTCCCATGCACGCTCTATTTGGTGT...GCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp GTGGGGAAGAAAGAAATCACGGCCACCTGGAATTACAGCCACCCTGAAGAAGGAATGCCACATCGCCACTaGCACAGGAGAACTGTCTTT +
Preference number: 4 (lower is better)
Translates to: VGKKEITATWNYSHPEEGMPHRH*HRRTVF
Trigger: AAAGACAGTTCTCCTGTGGCAGTGGCGATGTGGCAT...TCCTTCTTCAGGGTGGCTGTAATTCCAGGTGGCCGTGATTTCTTTCTTCCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp TCCACCAGGCTTCTGCTTCCGGTGGATGCGGGCATGGGACTTCTTATTCACGTACTTGAATTGAGTGTTTaGCTTGTTTTGGCGCTGGTG +
Preference number: 4 (lower is better)
Translates to: STRLLLPVDAGMGLLIHVLELSV*LVLALV
Trigger: CACCAGCGCCAAAACAAGGCAAACACTCAATTCAAG...TACGTGAATAAGAAGTCCCATGCCCGCATCCACCGGAAGCAGAAGCCTGGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp TGCAGAAGGGTGATTGGCACAATACGTGAGGTACAGGGTTTTCATCTGTGGCATTGCAGTCTCTGGGTGTaGCTCCACCTTCATGAGCAC +
Preference number: 4 (lower is better)
Translates to: CRRVIGTIREVQGFHLWHCSLWV*LHLHEH
Trigger: GTGCTCATGAAGGTGGAGGCACACCCAGAGACTGCA...ATGCCACAGATGAAAACCCTGTACCTCACGTATTGTGCCAATCACCCTTCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR CCA 90 bp CCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAACTGGGCTCACTCCAAACTCCGATACTaGCCCTGGAACAGTTTTGAA +
Preference number: 4 (lower is better)
Translates to: PTCCSARLPEHSRWNWAHSKLRY*PWNSFE
Trigger: TTCAAAACTGTTCCAGGGCCAGTATCGGAGTTTGGA...GTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp CATCTGAGCCATGACAGTAAGCTCTGCCTTTGGAAAGGAGAGCTCCCACTTCACTCCACACGGGTGACATaGATGACGTCTCCTTTTGAG +
Preference number: 4 (lower is better)
Translates to: HLSHDSKLCLWKGELPLHSTRVT*MTSPFE
Trigger: CTCAAAAGGAGACGTCATCCATGTCACCCGTGTGGA...GTGAAGTGGGAGCTCTCCTTTCCAAAGGCAGAGCTTACTGTCATGGCTCAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp ACATCTAAGAAAAGCAGGCTGCGATACAACAAGCATTTGTTAAGAAAAGCTCAGCGCGCACGTAGTTGCTaGGGAACCAGCCGGTCCGGC +
Preference number: 4 (lower is better)
Translates to: TSKKSRLRYNKHLLRKAQRARSC*GTSRSG
Trigger: GCCGGACCGGCTGGTTCCCCAGCAACTACGTGCGCG...CTGAGCTTTTCTTAACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp TTGATGCTACAACTGAATGCAACAGGTCACATTCAGTGCTTTTTGAAGCAGAAACGCGCACGTAGTTGCTaGGGAACCAGCCGGTCCGGC +
Preference number: 4 (lower is better)
Translates to: LMLQLNATGHIQCFLKQKRARSC*GTSRSG
Trigger: GCCGGACCGGCTGGTTCCCCAGCAACTACGTGCGCG...TTTCTGCTTCAAAAAGCACTGAATGTGACCTGTTGCATTCAGTTGTAGCATCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp GTGGGGAAGAAAGAAATCACGGCCACCTGGAATTACAGCCACCCTGAAGAAGGATCAGTGTTCCTGATTTaGGAGACACAGGCTTCTCGC +
Preference number: 4 (lower is better)
Translates to: VGKKEITATWNYSHPEEGSVFLI*ETQASR
Trigger: GCGAGAAGCCTGTGTCTCCCAAATCAGGAACACTGA...TCCTTCTTCAGGGTGGCTGTAATTCCAGGTGGCCGTGATTTCTTTCTTCCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp CGATTACCAGAACACAGCCGTTGGAACTGGGCTCACAGCACCTTTGCTGCATATTCAGTGTTCCTGATTTaGGAGACACAGGCTTCTCGC +
Preference number: 4 (lower is better)
Translates to: RLPEHSRWNWAHSTFAAYSVFLI*ETQASR
Trigger: GCGAGAAGCCTGTGTCTCCCAAATCAGGAACACTGA...ATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp AGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAATCGTATCAAATCCTTTaGGAGGGCTCTTCAGTGTTC +
Preference number: 4 (lower is better)
Translates to: RPRAHMLFCTITRTQPLESYQIL*EGSSVF
Trigger: GAACACTGAAGAGCCCTCCCAAAGGATTTGATACGA...TTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp AAAGTAGAAACAATGGCCCTCTGGATGCCACATCGCCACTGCCACAGGAGAACTCTGAATGAGGCTTTATaGTGGGGTTTCCCACAGACG +
Preference number: 4 (lower is better)
Translates to: KVETMALWMPHRHCHRRTLNEAL*WGFPQT
Trigger: CGTCTGTGGGAAACCCCACCATAAAGCCTCATTCAG...AGTTCTCCTGTGGCAGTGGCGATGTGGCATCCAGAGGGCCATTGTTTCTACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp AAACAATGGCCCTCTGGATGCCACATCGCCACTGCCACAGGAGAACTGTCTTTTGTTCAGGTTTGCGCTTaGGCAGCAGCTTTTTCATGG +
Preference number: 4 (lower is better)
Translates to: KQWPSGCHIATATGELSFVQVCA*AAAFSW
Trigger: CCATGAAAAAGCTGCTGCCCAAGCGCAAACCTGAAC...AAAAGACAGTTCTCCTGTGGCAGTGGCGATGTGGCATCCAGAGGGCCATTGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp CCTCTGCACTGGAACACAGTGGGGGAAACGTTCCCTGCTTATGCCTATGTTACTGTTCAGGTTTGCGCTTaGGCAGCAGCTTTTTCATGG +
Preference number: 4 (lower is better)
Translates to: PLHWNTVGETFPAYAYVTVQVCA*AAAFSW
Trigger: CCATGAAAAAGCTGCTGCCCAAGCGCAAACCTGAAC...AGTAACATAGGCATAAGCAGGGAACGTTTCCCCCACTGTGTTCCAGTGCAGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp AAACAATGGCCCTCTGGATGCCACATCGCCACTGCCACAGGAGAACTGTCTTTTGAGTCTAGGCTTGGTTaGTCATCATCAGCCAAGACG +
Preference number: 4 (lower is better)
Translates to: KQWPSGCHIATATGELSFESRLG*SSSAKT
Trigger: CGTCTTGGCTGATGATGACCAACCAAGCCTAGACTC...AAAAGACAGTTCTCCTGTGGCAGTGGCGATGTGGCATCCAGAGGGCCATTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp ACAGGCTTCGTCTCCTCTGCACTGGAACACAGTGGGGGAAACGTTCCCTGCTTAACATCCCTTATAGATTaGTCTCATCCCAGGCAGGAT +
Preference number: 4 (lower is better)
Translates to: TGFVSSALEHSGGNVPCLTSLID*SHPRQD
Trigger: ATCCTGCCTGGGATGAGACCAATCTATAAGGGATGT...TAAGCAGGGAACGTTTCCCCCACTGTGTTCCAGTGCAGAGGAGACGAAGCCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp CATCTGAGAATCACAGTACTCAGACAGCGGACAAGAGCAAACACCTCTAGGTGGTGCACTGGAACACAGTaGGGGAAACGTTCCCTGCTT +
Preference number: 4 (lower is better)
Translates to: HLRITVLRQRTRANTSRWCTGTQ*GKRSLL
Trigger: AAGCAGGGAACGTTTCCCCCACTGTGTTCCAGTGCA...CCACCTAGAGGTGTTTGCTCTTGTCCGCTGTCTGAGTACTGTGATTCTCAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp ACAGGCTTCGTCTCCTCTGCACTGGAACACAGTGGGGGAAACGTTCCCTGCTTAAGCCGAGGAAGATACTaGATCCACAGAAAGAAAAGG +
Preference number: 4 (lower is better)
Translates to: TGFVSSALEHSGGNVPCLSRGRY*IHRKKR
Trigger: CCTTTTCTTTCTGTGGATCCAGTATCTTCCTCGGCT...TAAGCAGGGAACGTTTCCCCCACTGTGTTCCAGTGCAGAGGAGACGAAGCCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp AGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAACAATTCAGGGAAGTTTaGGGTGAAGATGCGAGTGAA +
Preference number: 4 (lower is better)
Translates to: RPRAHMLFCTITRTQPLEQFREV*GEDASE
Trigger: TTCACTCGCATCTTCACCCCAAACTTCCCTGAATTG...TTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp ACCTCAGAGTTTCTGAAGGACAACAGCAACAACCCGGAGCAGGGGCACGTGTGCTCCGCGGCTAAGTACTaGCACATTGTAATAGCTTTT +
Preference number: 4 (lower is better)
Translates to: TSEFLKDNSNNPEQGHVCSAAKY*HIVIAF
Trigger: AAAAGCTATTACAATGTGCCAGTACTTAGCCGCGGA...GCACACGTGCCCCTGCTCCGGGTTGTTGCTGTTGTCCTTCAGAAACTCTGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469877.5
3UTR CAA 72 bp TGTAGGTGCTCCACCCATTCCTGCAGATCCTGCTGGTaGTTGCACGACACTAATATCCGCTCAATCATGCTC +
Preference number: 4 (lower is better)
Translates to: CRCSTHSCRSCW*LHDTNIRSIML
Trigger: GAGCATGATTGAGCGGATATTAGTGTCGTGCAACAACCAGCAGGATCTGCAGGAATGGGTGGAGCACCTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR TCA 90 bp TTACGAAGAGCACCCTCGGATGTAGGCTCACGTGAACACACCACCTCCCTCCAAGCTCTTACTACCAGTTaGTTGTTGCTATTATCGGTC +
Preference number: 4 (lower is better)
Translates to: LRRAPSDVGSREHTTSLQALTTS*LLLLSV
Trigger: GACCGATAATAGCAACAATCAACTGGTAGTAAGAGC...TTGGAGGGAGGTGGTGTGTTCACGTGAGCCTACATCCGAGGGTGCTCTTCGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp GGATTTGATGCTACAACTGAATGCAACAGGTCACATTCAGTGCTTTTTGAAGCAGCTTCTCGCTGGCCTTaGCCTCGCGCACGTAGTTGC +
Preference number: 4 (lower is better)
Translates to: GFDATTECNRSHSVLFEAASRWP*PRARSC
Trigger: GCAACTACGTGCGCGAGGTCAAGGCCAGCGAGAAGC...TGCTTCAAAAAGCACTGAATGTGACCTGTTGCATTCAGTTGTAGCATCAAATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp CAGAGTTTTAATGTCATCGCCCTCCCAGTTCCGGATGGCTTCCGTCAGGATCTGGATTGGCACAATACGTaGGGTACAGGGTTTTCATCT +
Preference number: 4 (lower is better)
Translates to: QSFNVIALPVPDGFRQDLDWHNT*GTGFSS
Trigger: AGATGAAAACCCTGTACCTCACGTATTGTGCCAATC...CAGATCCTGACGGAAGCCATCCGGAACTGGGAGGGCGATGACATTAAAACTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR TCA 90 bp CCTCTACTACAGTCCAGTAGTCTACACTTGCAGAGGCTGAATGCTTCAGCTTTCCCTCACTGTGTTCCGTaGGGACATTCACTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: PLLQSSSLHLQRLNASAFPHCVP*GHSLQK
Trigger: CTTCTGCAGTGAATGTCCTCACGGAACACAGTGAGG...GAAAGCTGAAGCATTCAGCCTCTGCAAGTGTAGACTACTGGACTGTAGTAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp GGACATGTAAGTGACGTTGCCCAGAGTTTTAATGTCATCGCCCTCCCAGTTCCGCTCTTCCGGACTTCTTaGCATTGGGCTGAAAGGTTT +
Preference number: 4 (lower is better)
Translates to: GHVSDVAQSFNVIALPVPLFRTS*HWAERF
Trigger: AAACCTTTCAGCCCAATGTCAAGAAGTCCGGAAGAG...CGGAACTGGGAGGGCGATGACATTAAAACTCTGGGCAACGTCACTTACATGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR TCA 90 bp CCTCTACTACAGTCCAGTAGTCTACACTTGCAGAGGCTGAATGCTTCAGCTTTCCGCGAACTCCTCATCTaGAGGCTTCCGTTCAGGTTT +
Preference number: 4 (lower is better)
Translates to: PLLQSSSLHLQRLNASAFRELLI*RLPFRF
Trigger: AAACCTGAACGGAAGCCTTCAGATGAGGAGTTCGCG...GAAAGCTGAAGCATTCAGCCTCTGCAAGTGTAGACTACTGGACTGTAGTAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp CTGTGGTCACCCTTATTTATTGCTGAAGCAGAACGAAAACCTGCTCCACGGGCCTCATCAGCCAAGACGTaGTTATGCATCAGGTCAGTG +
Preference number: 4 (lower is better)
Translates to: LWSPLFIAEAERKPAPRASSAKT*LCIRSV
Trigger: CACTGACCTGATGCATAATCACGTCTTGGCTGATGA...GGCCCGTGGAGCAGGTTTTCGTTCTGCTTCAGCAATAAATAAGGGTGACCACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000218789.9
CDS-3UTR TCA 90 bp CATCTGAGCCATGACAGTAAGCTCTGCCTTTGGAAAGGAGAGCTCCCACTTCACTCATCAGCCAAGACGTaGTTATGCATCAGGTCAGTG +
Preference number: 4 (lower is better)
Translates to: HLSHDSKLCLWKGELPLHSSAKT*LCIRSV
Trigger: CACTGACCTGATGCATAATCACGTCTTGGCTGATGA...GTGAAGTGGGAGCTCTCCTTTCCAAAGGCAGAGCTTACTGTCATGGCTCAGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp AGAACACAGCCGTTGGAACTGGGCTCACAGCACCTTTGCTGCATATATTCTTCTGTCTTCCGAGAGGTCTaGAGGCTCCAAACGAGAAAG +
Preference number: 4 (lower is better)
Translates to: RTQPLELGSQHLCCIYSSVFREV*RLQTRK
Trigger: CTTTCTCGTTTGGAGCCTTCAGACCTCTCGGAAGAC...AGAAGAATATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp GTGTATTTTGTTGTTACTGAACTAGCCTATACAGAACCGTCTGTGTCCTCCCAACCCAGGCAGACAACGTaGCCAGTCACGGAAGGAAGC +
Preference number: 4 (lower is better)
Translates to: VYFVVTELAYTEPSVSSQPRQTT*PVTEGS
Trigger: GCTTCCTTCCGTGACTGGTCACGTTGTCTGCCTGGG...TTGGGAGGACACAGACGGTTCTGTATAGGCTAGTTCAGTAACAACAAAATACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp CCTCTGCACTGGAACACAGTGGGGGAAACGTTCCCTGCTTATGCCTATGTTACTTTGCTTGTGCCCGCATaGGTGAATGATCTGCTAAGT +
Preference number: 4 (lower is better)
Translates to: PLHWNTVGETFPAYAYVTLLVPA*VNDLLS
Trigger: ACTTAGCAGATCATTCACTCATGCGGGCACAAGCAA...AGTAACATAGGCATAAGCAGGGAACGTTTCCCCCACTGTGTTCCAGTGCAGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp CGATTACCAGAACACAGCCGTTGGAACTGGGCTCACAGCACCTTTGCTGCATATTGCAGCAACTGTGTTTaGGTGTTGTGGTCTACACAG +
Preference number: 4 (lower is better)
Translates to: RLPEHSRWNWAHSTFAAYCSNCV*VLWSTQ
Trigger: CTGTGTAGACCACAACACTCAAACACAGTTGCTGCA...ATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp ATCGCCCTCCCAGTTCCGGATGGCTTCCGTCAGGATCTGCAGCTCAAGCTCTTTATCTGTAGTAACAGATaGTCTGGGGAAACACATTCA +
Preference number: 4 (lower is better)
Translates to: IALPVPDGFRQDLQLKLFICSNR*SGETHS
Trigger: TGAATGTGTTTCCCCAGATCATCTGTTACTACAGAT...AAAGAGCTTGAGCTGCAGATCCTGACGGAAGCCATCCGGAACTGGGAGGGCGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR GCA 90 bp CCTGCTACAACAGCAAACTCCAATAAACTCAAGTTGAATGGTTTCCCACTGCAAGGAACTCGCGGATGTTaGTCAGGCACTCGCTCTCGC +
Preference number: 4 (lower is better)
Translates to: PATTANSNKLKLNGFPLQGTRGC*SGTRSR
Trigger: GCGAGAGCGAGTGCCTGAGCAACATCCGCGAGTTCC...TTGCAGTGGGAAACCATTCAACTTGAGTTTATTGGAGTTTGCTGTTGTAGCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000218789.9
ENST00000375736.8
CDS-3UTR GCA 90 bp ACAGGCTTCGTCTCCTCTGCACTGGAACACAGTGGGGGAAACGTTCCCTGCTTACTGATACAAATCATTTaGATCAAACGTCTCCAGCCG +
Preference number: 4 (lower is better)
Translates to: TGFVSSALEHSGGNVPCLLIQII*IKRLQP
Trigger: CGGCTGGAGACGTTTGATGCAAATGATTTGTATCAG...TAAGCAGGGAACGTTTCCCCCACTGTGTTCCAGTGCAGAGGAGACGAAGCCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000218789.9
ENST00000375736.8
CDS-3UTR GCA 90 bp AGGGTGATTGGCACAATACGTGAGGTACAGGGTTTTCATCTGTGGCATCAGGTTGCTTCCGTCAGGATCTaGAGCTCAAGCTCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: RVIGTIREVQGFHLWHQVASVRI*SSSSFL
Trigger: GAGGAAAGAGCTTGAGCTGCAGATCCTGACGGAAGC...AACCTGATGCCACAGATGAAAACCCTGTACCTCACGTATTGTGCCAATCACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR GCA 90 bp AAAGGAAACCAAAAGCAAAGTCCCTGTGGTCACCCTTATTTATTGCTGAAGCAGGGCTTGCTGTCTGCGTaGTTGCTGGACGGAGTGACC +
Preference number: 4 (lower is better)
Translates to: KGNQKQSPCGHPYLLLKQGLLSA*LLDGVT
Trigger: GGTCACTCCGTCCAGCAAGCACGCAGACAGCAAGCC...CTGCTTCAGCAATAAATAAGGGTGACCACAGGGACTTTGCTTTTGGTTTCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp AGGGGAAGGGCTGTTAAAAACACAAGTATTCTTGTGAAATACTTCGATCTGAGCCGCGGGCTTGCTGTCTaGGTGCTTGCTGGACGGAGT +
Preference number: 4 (lower is better)
Translates to: RGRAVKNTSILVKYFDLSRGLAV*VLAGRS
Trigger: ACTCCGTCCAGCAAGCACGCAGACAGCAAGCCCGCG...GCTCAGATCGAAGTATTTCACAAGAATACTTGTGTTTTTAACAGCCCTTCCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp ACATCTAAGAAAAGCAGGCTGCGATACAACAAGCATTTGTTAAGAAAAGCTCAGTCAGCGGCGCGGGCTTaGTGTCTGCGTGCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: TSKKSRLRYNKHLLRKAQSAARA*CLRACW
Trigger: CCAGCAAGCACGCAGACAGCAAGCCCGCGCCGCTGA...CTGAGCTTTTCTTAACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
ENST00000478679.5
CDS-3UTR GCA 90 bp GCTTGTTCCATGCTGAATGAAGCCACCCAACTTTCTAAACAACGTGCTACTGCCGCTTCCGTTCAGGTTTaGGCTTGGGCAGCAGCTTTT +
Preference number: 4 (lower is better)
Translates to: ACSMLNEATQLSKQRATAASVQV*AWAAAF
Trigger: AAAAGCTGCTGCCCAAGCGCAAACCTGAACGGAAGC...GGCAGTAGCACGTTGTTTAGAAAGTTGGGTGGCTTCATTCAGCATGGAACAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp CCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAACTGGGCTCACATCAGGTCAGTGCCTTaGCATGTTGAATTGAGTGTT +
Preference number: 4 (lower is better)
Translates to: PTCCSARLPEHSRWNWAHIRSVP*HVELSV
Trigger: AACACTCAATTCAACATGGCAAGGCACTGACCTGAT...GTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp CTTCTTATTCACGTAGCTGGAAAGGACATTCTAGCATGGGGATTAGCCCGGACACCATCAGTATCAGCCTaGAGCATGGCCTCCATCTGT +
Preference number: 4 (lower is better)
Translates to: LLIHVAGKDILAWGLARTPSVSA*SMASIC
Trigger: ACAGATGGAGGCCATGCTGCAGGCTGATACTGATGG...TGTCCGGGCTAATCCCCATGCTAGAATGTCCTTTCCAGCTACGTGAATAAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp TTTGTTGTTACTGAACTAGCCTATACAGAACCGTCTGTGTCCTCCCAAAACGCAGTGAGCACTGAAGCCTaGTGGCTACGGCCAATGGTG +
Preference number: 4 (lower is better)
Translates to: FVVTELAYTEPSVSSQNAVSTEA*WLRPMV
Trigger: CACCATTGGCCGTAGCCAGCAGGCTTCAGTGCTCAC...TGCGTTTTGGGAGGACACAGACGGTTCTGTATAGGCTAGTTCAGTAACAACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp AAAGGAAACCAAAAGCAAAGTCCCTGTGGTCACCCTTATTTATTGCTGAAGCAGAGCAGAACGAAAACCTaGTCCACGGGCCGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: KGNQKQSPCGHPYLLLKQSRTKT*STGRAS
Trigger: GGAAGCCCGGCCCGTGGAGCAGGTTTTCGTTCTGCT...CTGCTTCAGCAATAAATAAGGGTGACCACAGGGACTTTGCTTTTGGTTTCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp CTTCTTATTCACGTAGCTGGAAAGGACATTCTAGCATGGGGATTAGCCCGGACAAACACTCTCCCAAGGTaGCCAGCTCAAAGGCATCAG +
Preference number: 4 (lower is better)
Translates to: LLIHVAGKDILAWGLARTNTLPR*PAQRHQ
Trigger: CTGATGCCTTTGAGCTGGGCACCTTGGGAGAGTGTT...TGTCCGGGCTAATCCCCATGCTAGAATGTCCTTTCCAGCTACGTGAATAAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp TTTGTTGTTACTGAACTAGCCTATACAGAACCGTCTGTGTCCTCCCAAAACGCAGCATTAAGGCAGGTCTaGAGGAGATCCGTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: FVVTELAYTEPSVSSQNAALRQV*RRSVLG
Trigger: CCCCAGGACGGATCTCCTGCAGACCTGCCTTAATGC...TGCGTTTTGGGAGGACACAGACGGTTCTGTATAGGCTAGTTCAGTAACAACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp CATCTGAGCCATGACAGTAAGCTCTGCCTTTGGAAAGGAGAGCTCCCACTTCACACGTTTGTTTCGCTTTaGTACCTTGCAAGCCGGTCA +
Preference number: 4 (lower is better)
Translates to: HLSHDSKLCLWKGELPLHTFVSL*YLASRS
Trigger: TGACCGGCTTGCAAGGTAGCAAAGCGAAACAAACGT...GTGAAGTGGGAGCTCTCCTTTCCAAAGGCAGAGCTTACTGTCATGGCTCAGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317133.9
CDS-3UTR GCA 90 bp AGAACACAGCCGTTGGAACTGGGCTCACAGCACCTTTGCTGCATATATTCTTCTAGCCACGTAACGGTTTaGTCGGCGGAATTCATCGCT +
Preference number: 4 (lower is better)
Translates to: RTQPLELGSQHLCCIYSSSHVTV*SAEFIA
Trigger: AGCGATGAATTCCGCCGAGCAAACCGTTACGTGGCT...AGAAGAATATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317133.9
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp GGATTTGATGCTACAACTGAATGCAACAGGTCACATTCAGTGCTTTTTGAAGCATCCTTCAGCGACGCCTaGAGAAAGCCCTCCGGGTCC +
Preference number: 4 (lower is better)
Translates to: GFDATTECNRSHSVLFEASFSDA*RKPSGS
Trigger: GGACCCGGAGGGCTTTCTGCAGGCGTCGCTGAAGGA...TGCTTCAAAAAGCACTGAATGTGACCTGTTGCATTCAGTTGTAGCATCAAATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp AAACAATGGCCCTCTGGATGCCACATCGCCACTGCCACAGGAGAACTGTCTTTTCATGACAGTAAGCTCTaGCTTTGGAAAGGAGAGCTC +
Preference number: 4 (lower is better)
Translates to: KQWPSGCHIATATGELSFHDSKL*LWKGEL
Trigger: GAGCTCTCCTTTCCAAAGGCAGAGCTTACTGTCATG...AAAAGACAGTTCTCCTGTGGCAGTGGCGATGTGGCATCCAGAGGGCCATTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp CTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTACAGGCTTGCTATGTaGCTTATAACAGAAATCACT +
Preference number: 4 (lower is better)
Translates to: LPRPRAHMLFCTITRTQPYRLAM*LITEIT
Trigger: AGTGATTTCTGTTATAAGGCACATAGCAAGCCTGTA...CGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp GTGGGGAAGAAAGAAATCACGGCCACCTGGAATTACAGCCACCCTGAAGAAGGACTTGCAGAGGCTGAATaGTTCAGCTTTCGGGCTTTA +
Preference number: 4 (lower is better)
Translates to: VGKKEITATWNYSHPEEGLAEAE*FSFRAL
Trigger: TAAAGCCCGAAAGCTGAAGCATTCAGCCTCTGCAAG...TCCTTCTTCAGGGTGGCTGTAATTCCAGGTGGCCGTGATTTCTTTCTTCCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp CTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGACAGGTCACATTCAGTaGTTTTTGAAGCAGAAATTG +
Preference number: 4 (lower is better)
Translates to: LPRPRAHMLFCTITRTQPTGHIQ*FLKQKL
Trigger: CAATTTCTGCTTCAAAAAGCACTGAATGTGACCTGT...CGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp TTACGAAGAGCACCCTCGGATGTAGGCTCACGTGAACACACCACCTCCCTCCAAGATGCTACAACTGAATaGAACAGGTCACATTCAGTG +
Preference number: 4 (lower is better)
Translates to: LRRAPSDVGSREHTTSLQDATTE*NRSHSV
Trigger: CACTGAATGTGACCTGTTGCATTCAGTTGTAGCATC...TTGGAGGGAGGTGGTGTGTTCACGTGAGCCTACATCCGAGGGTGCTCTTCGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp AAAGTAGAAACAATGGCCCTCTGGATGCCACATCGCCACTGCCACAGGAGAACTTTTGGAATTAACAGCTaGCCTGATGTCTCCTGTGCC +
Preference number: 4 (lower is better)
Translates to: KVETMALWMPHRHCHRRTFGINS*PDVSCA
Trigger: GGCACAGGAGACATCAGGGCAGCTGTTAATTCCAAA...AGTTCTCCTGTGGCAGTGGCGATGTGGCATCCAGAGGGCCATTGTTTCTACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp ACCTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCGTCAGGTTATTCTTCTaGAGTGATCTTAGCATCAAG +
Preference number: 4 (lower is better)
Translates to: TCQGPEPTCCSARLPEHSVRLFF*SDLSIK
Trigger: CTTGATGCTAAGATCACTGCAGAAGAATAACCTGAC...GCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp CCATTAGCTTGTTCCATGCTGAATGAAGCCACCCAACTTTCTAAACAACGTGCTCAATGGCCCTCTGGATaGCACATCGCCACTGCCACA +
Preference number: 4 (lower is better)
Translates to: PLACSMLNEATQLSKQRAQWPSG*HIATAT
Trigger: TGTGGCAGTGGCGATGTGGCATCCAGAGGGCCATTG...AGCACGTTGTTTAGAAAGTTGGGTGGCTTCATTCAGCATGGAACAAGCTAATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp CGATTACCAGAACACAGCCGTTGGAACTGGGCTCACAGCACCTTTGCTGCATATTCCTGCAGATCCTGCTaGTTGTTGCACGACACTAAT +
Preference number: 4 (lower is better)
Translates to: RLPEHSRWNWAHSTFAAYSCRSC*LLHDTN
Trigger: ATTAGTGTCGTGCAACAACCAGCAGGATCTGCAGGA...ATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp CGATTACCAGAACACAGCCGTTGGAACTGGGCTCACAGCACCTTTGCTGCATATGTGTTTGCCTTGTTTTaGCGCTGGTGCAGTAAGCTT +
Preference number: 4 (lower is better)
Translates to: RLPEHSRWNWAHSTFAAYVFALF*RWCSKL
Trigger: AAGCTTACTGCACCAGCGCCAAAACAAGGCAAACAC...ATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp ATCTACAGGATAAGAAATGGCTTCATCTCCTCATCCATACAAGGTGAGAGCAAAATACAGAGAGCAAGGTaGCGCCCCACCCAGCCCTGC +
Preference number: 4 (lower is better)
Translates to: IYRIRNGFISSSIQGESKIQRAR*RPTQPC
Trigger: GCAGGGCTGGGTGGGGCGCCACCTTGCTCTCTGTAT...TTTGCTCTCACCTTGTATGGATGAGGAGATGAAGCCATTTCTTATCCTGTAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp AAAGGAAACCAAAAGCAAAGTCCCTGTGGTCACCCTTATTTATTGCTGAAGCAGGGCTTCTGCTTCCGGTaGATGCGGGCATGGGACTTC +
Preference number: 4 (lower is better)
Translates to: KGNQKQSPCGHPYLLLKQGFCFR*MRAWDF
Trigger: GAAGTCCCATGCCCGCATCCACCGGAAGCAGAAGCC...CTGCTTCAGCAATAAATAAGGGTGACCACAGGGACTTTGCTTTTGGTTTCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp CTTCTTATTCACGTAGCTGGAAAGGACATTCTAGCATGGGGATTAGCCCGGACATTAGAAATACCGACATaGGGGGTGCTGCCACAGCAC +
Preference number: 4 (lower is better)
Translates to: LLIHVAGKDILAWGLARTLEIPT*GVLPQH
Trigger: GTGCTGTGGCAGCACCCCCCATGTCGGTATTTCTAA...TGTCCGGGCTAATCCCCATGCTAGAATGTCCTTTCCAGCTACGTGAATAAGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp CCTCTGCACTGGAACACAGTGGGGGAAACGTTCCCTGCTTATGCCTATGTTACTTATCAGCCTGCAGCATaGCCTCCATCTGTTTTCATC +
Preference number: 4 (lower is better)
Translates to: PLHWNTVGETFPAYAYVTYQPAA*PPSVFI
Trigger: GATGAAAACAGATGGAGGCCATGCTGCAGGCTGATA...AGTAACATAGGCATAAGCAGGGAACGTTTCCCCCACTGTGTTCCAGTGCAGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp CATCTGAGCCATGACAGTAAGCTCTGCCTTTGGAAAGGAGAGCTCCCACTTCACAGTAAGCTCTGCCTTTaGAAAGGAGAGCTCCCACTT +
Preference number: 4 (lower is better)
Translates to: HLSHDSKLCLWKGELPLHSKLCL*KGELPL
Trigger: AAGTGGGAGCTCTCCTTTCCAAAGGCAGAGCTTACT...GTGAAGTGGGAGCTCTCCTTTCCAAAGGCAGAGCTTACTGTCATGGCTCAGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp CGATTACCAGAACACAGCCGTTGGAACTGGGCTCACAGCACCTTTGCTGCATATAGTAAGCTCTGCCTTTaGAAAGGAGAGCTCCCACTT +
Preference number: 4 (lower is better)
Translates to: RLPEHSRWNWAHSTFAAYSKLCL*KGELPL
Trigger: AAGTGGGAGCTCTCCTTTCCAAAGGCAGAGCTTACT...ATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp CATCTGAGCCATGACAGTAAGCTCTGCCTTTGGAAAGGAGAGCTCCCACTTCACTGGGGTTGCTGTAAATaGAGTTTCACTGCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: HLSHDSKLCLWKGELPLHWGCCK*SFTAAG
Trigger: ACCAGCTGCAGTGAAACTCCATTTACAGCAACCCCA...GTGAAGTGGGAGCTCTCCTTTCCAAAGGCAGAGCTTACTGTCATGGCTCAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp GTGGGGAAGAAAGAAATCACGGCCACCTGGAATTACAGCCACCCTGAAGAAGGATGGGGTTGCTGTAAATaGAGTTTCACTGCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: VGKKEITATWNYSHPEEGWGCCK*SFTAAG
Trigger: ACCAGCTGCAGTGAAACTCCATTTACAGCAACCCCA...TCCTTCTTCAGGGTGGCTGTAATTCCAGGTGGCCGTGATTTCTTTCTTCCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp AGGGTGATTGGCACAATACGTGAGGTACAGGGTTTTCATCTGTGGCATCAGGTTCCCAAATGTGTCTGCTaGCAGGCATGCCTTTCAACC +
Preference number: 4 (lower is better)
Translates to: RVIGTIREVQGFHLWHQVPKCVC*QACLST
Trigger: GGTTGAAAGGCATGCCTGCCAGCAGACACATTTGGG...AACCTGATGCCACAGATGAAAACCCTGTACCTCACGTATTGTGCCAATCACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR CCA 90 bp AGGGTGATTGGCACAATACGTGAGGTACAGGGTTTTCATCTGTGGCATCAGGTTGACCACAGCACACTCTaGCTCCCAAATGTGTCTGCT +
Preference number: 4 (lower is better)
Translates to: RVIGTIREVQGFHLWHQVDHSTL*LPNVSA
Trigger: AGCAGACACATTTGGGAGCCAGAGTGTGCTGTGGTC...AACCTGATGCCACAGATGAAAACCCTGTACCTCACGTATTGTGCCAATCACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469877.5
3UTR CAA 72 bp AACCAAAAGCAAAGTCCCTGTGGTCACCCTTATTTATaGCTGAAGCAGAACGAAAACCTGCTCCACGGGCCG +
Preference number: 4 (lower is better)
Translates to: NQKQSPCGHPYL*LKQNENLLHGP
Trigger: CGGCCCGTGGAGCAGGTTTTCGTTCTGCTTCAGCAATAAATAAGGGTGACCACAGGGACTTTGCTTTTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR CAA 72 bp CACATGCTGTTCTGCACGATTACCAGAACACAGCCGTaGGAACTGGGCTCACAGCACCTTTGCTGCATATAT +
Preference number: 4 (lower is better)
Translates to: HMLFCTITRTQP*ELGSQHLCCIY
Trigger: ATATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp CATCTGAGCCATGACAGTAAGCTCTGCCTTTGGAAAGGAGAGCTCCCACTTCACAGTGTGCAAAGACTGTaGTCCAAGGGAGTCAAAAGA +
Preference number: 4 (lower is better)
Translates to: HLSHDSKLCLWKGELPLHSVQRL*SKGVKR
Trigger: TCTTTTGACTCCCTTGGATCACAGTCTTTGCACACT...GTGAAGTGGGAGCTCTCCTTTCCAAAGGCAGAGCTTACTGTCATGGCTCAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp GTGGGGAAGAAAGAAATCACGGCCACCTGGAATTACAGCCACCCTGAAGAAGGAAGTGTGCAAAGACTGTaGTCCAAGGGAGTCAAAAGA +
Preference number: 4 (lower is better)
Translates to: VGKKEITATWNYSHPEEGSVQRL*SKGVKR
Trigger: TCTTTTGACTCCCTTGGATCACAGTCTTTGCACACT...TCCTTCTTCAGGGTGGCTGTAATTCCAGGTGGCCGTGATTTCTTTCTTCCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp GCTTGTTCCATGCTGAATGAAGCCACCCAACTTTCTAAACAACGTGCTACTGCCGATGACGTCTCCTTTTaGGAAGGAAAGCTCGTCCTC +
Preference number: 4 (lower is better)
Translates to: ACSMLNEATQLSKQRATADDVSF*EGKLVL
Trigger: GAGGACGAGCTTTCCTTCTCAAAAGGAGACGTCATC...GGCAGTAGCACGTTGTTTAGAAAGTTGGGTGGCTTCATTCAGCATGGAACAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp AGGGGAAGGGCTGTTAAAAACACAAGTATTCTTGTGAAATACTTCGATCTGAGCCCTCCGACTCTCTGCTaGGCTTCGGGCAACTTGGTG +
Preference number: 4 (lower is better)
Translates to: RGRAVKNTSILVKYFDLSPPTLC*ASGNLV
Trigger: CACCAAGTTGCCCGAAGCTCAGCAGAGAGTCGGAGG...GCTCAGATCGAAGTATTTCACAAGAATACTTGTGTTTTTAACAGCCCTTCCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp CGATTACCAGAACACAGCCGTTGGAACTGGGCTCACAGCACCTTTGCTGCATATGATTGGCACAATACGTaGGGTACAGGGTTTTCATCT +
Preference number: 4 (lower is better)
Translates to: RLPEHSRWNWAHSTFAAYDWHNT*GTGFSS
Trigger: AGATGAAAACCCTGTACCTCACGTATTGTGCCAATC...ATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp CTGTGGTCACCCTTATTTATTGCTGAAGCAGAACGAAAACCTGCTCCACGGGCCGGGCTGAAAGGTTTTTaGAGGCAGCCATGGATTTTT +
Preference number: 4 (lower is better)
Translates to: LWSPLFIAEAERKPAPRAGLKGF*RQPWIF
Trigger: AAAAATCCATGGCTGCCTTCAAAAACCTTTCAGCCC...GGCCCGTGGAGCAGGTTTTCGTTCTGCTTCAGCAATAAATAAGGGTGACCACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp AGAACCGTAAACAGCAACACAACACTCTCCCAAGGTGCCCAGCTCAAAGGCATCTTCTTGACATTGGGCTaGAAGGTTTTTGAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: RTVNSNTTLSQGAQLKGIFLTLG*KVFEGS
Trigger: GCTGCCTTCAAAAACCTTTCAGCCCAATGTCAAGAA...GATGCCTTTGAGCTGGGCACCTTGGGAGAGTGTTGTGTTGCTGTTTACGGTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp CATCTGAGCCATGACAGTAAGCTCTGCCTTTGGAAAGGAGAGCTCCCACTTCACTTCTTGACATTGGGCTaGAAGGTTTTTGAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: HLSHDSKLCLWKGELPLHFLTLG*KVFEGS
Trigger: GCTGCCTTCAAAAACCTTTCAGCCCAATGTCAAGAA...GTGAAGTGGGAGCTCTCCTTTCCAAAGGCAGAGCTTACTGTCATGGCTCAGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp TTTGTTGTTACTGAACTAGCCTATACAGAACCGTCTGTGTCCTCCCAAAACGCATCACTTCCGGCACACTaGATCAGGACCTGGGACATG +
Preference number: 4 (lower is better)
Translates to: FVVTELAYTEPSVSSQNASLPAH*IRTWDM
Trigger: CATGTCCCAGGTCCTGATTCAGTGTGCCGGAAGTGA...TGCGTTTTGGGAGGACACAGACGGTTCTGTATAGGCTAGTTCAGTAACAACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp AGAACACAGCCGTTGGAACTGGGCTCACAGCACCTTTGCTGCATATATTCTTCTGGTTTCCCACAGACGTaGCCTTCGTTTGCTTCTGTA +
Preference number: 4 (lower is better)
Translates to: RTQPLELGSQHLCCIYSSGFPQT*PSFASV
Trigger: TACAGAAGCAAACGAAGGTCACGTCTGTGGGAAACC...AGAAGAATATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp AGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAAATGACTTTCAGAATCTaGGCATCTTCTTCCAAAGCA +
Preference number: 4 (lower is better)
Translates to: RPRAHMLFCTITRTQPLEMTFRI*ASSSKA
Trigger: TGCTTTGGAAGAAGATGCTCAGATTCTGAAAGTCAT...TTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp ACAGGCTTCGTCTCCTCTGCACTGGAACACAGTGGGGGAAACGTTCCCTGCTTAATGACTTTCAGAATCTaGGCATCTTCTTCCAAAGCA +
Preference number: 4 (lower is better)
Translates to: TGFVSSALEHSGGNVPCLMTFRI*ASSSKA
Trigger: TGCTTTGGAAGAAGATGCTCAGATTCTGAAAGTCAT...TAAGCAGGGAACGTTTCCCCCACTGTGTTCCAGTGCAGAGGAGACGAAGCCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp TTACGAAGAGCACCCTCGGATGTAGGCTCACGTGAACACACCACCTCCCTCCAATGCAGTAAGCTTCAATaGCTTTCAGAATCTGAGCAT +
Preference number: 4 (lower is better)
Translates to: LRRAPSDVGSREHTTSLQCSKLQ*LSESEH
Trigger: ATGCTCAGATTCTGAAAGTCATTGAAGCTTACTGCA...TTGGAGGGAGGTGGTGTGTTCACGTGAGCCTACATCCGAGGGTGCTCTTCGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp CATCTGAGCCATGACAGTAAGCTCTGCCTTTGGAAAGGAGAGCTCCCACTTCACAGTGCCTTGCCATGTTaGATTGAGTGTTTGCCTTGT +
Preference number: 4 (lower is better)
Translates to: HLSHDSKLCLWKGELPLHSALPC*IECLPC
Trigger: ACAAGGCAAACACTCAATTCAACATGGCAAGGCACT...GTGAAGTGGGAGCTCTCCTTTCCAAAGGCAGAGCTTACTGTCATGGCTCAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp GCGGGCATGGGACTTCTTATTCACGTAGCTGGAAAGGACATTCTAGCATGGGGATCATCAGTCATGGTTTaGTCGTCTCCATTCGCAGAA +
Preference number: 4 (lower is better)
Translates to: AGMGLLIHVAGKDILAWGSSVMV*SSPFAE
Trigger: TTCTGCGAATGGAGACGATCAAACCATGACTGATGA...TCCCCATGCTAGAATGTCCTTTCCAGCTACGTGAATAAGAAGTCCCATGCCCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp TATCAAGTTCCCACCCCCTTGGGAGGTCACACGGTGAAACAGACACAGTTATATGTTCACAGAGTGGATTaGTGTAGCTCAGGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: YQVPTPLGGHTVKQTQLYVHRVD*CSSGPQ
Trigger: CTGAGGACCTGAGCTACATCAATCCACTCTGTGAAC...ATATAACTGTGTCTGTTTCACCGTGTGACCTCCCAAGGGGGTGGGAACTTGATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp CTGTGGTCACCCTTATTTATTGCTGAAGCAGAACGAAAACCTGCTCCACGGGCCACTTCTGAATGGGACTaGAGTGTATCTCTGCAGGTA +
Preference number: 4 (lower is better)
Translates to: LWSPLFIAEAERKPAPRATSEWD*SVSLQV
Trigger: TACCTGCAGAGATACACTTCAGTCCCATTCAGAAGT...GGCCCGTGGAGCAGGTTTTCGTTCTGCTTCAGCAATAAATAAGGGTGACCACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp AGAACCGTAAACAGCAACACAACACTCTCCCAAGGTGCCCAGCTCAAAGGCATCACTTCTGAATGGGACTaGAGTGTATCTCTGCAGGTA +
Preference number: 4 (lower is better)
Translates to: RTVNSNTTLSQGAQLKGITSEWD*SVSLQV
Trigger: TACCTGCAGAGATACACTTCAGTCCCATTCAGAAGT...GATGCCTTTGAGCTGGGCACCTTGGGAGAGTGTTGTGTTGCTGTTTACGGTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp TCCACCAGGCTTCTGCTTCCGGTGGATGCGGGCATGGGACTTCTTATTCACGTAAGTAAGATCTCTCTTTaGGGGAAGACAAAACAGTGT +
Preference number: 4 (lower is better)
Translates to: STRLLLPVDAGMGLLIHVSKISL*GKTKQC
Trigger: ACACTGTTTTGTCTTCCCTCAAAGAGAGATCTTACT...TACGTGAATAAGAAGTCCCATGCCCGCATCCACCGGAAGCAGAAGCCTGGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp ATCTACAGGATAAGAAATGGCTTCATCTCCTCATCCATACAAGGTGAGAGCAAACCCAGGCAGACAACGTaGCCAGTCACGGAAGGAAGC +
Preference number: 4 (lower is better)
Translates to: IYRIRNGFISSSIQGESKPRQTT*PVTEGS
Trigger: GCTTCCTTCCGTGACTGGTCACGTTGTCTGCCTGGG...TTTGCTCTCACCTTGTATGGATGAGGAGATGAAGCCATTTCTTATCCTGTAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp TTGATGCTACAACTGAATGCAACAGGTCACATTCAGTGCTTTTTGAAGCAGAAAAGCTCTGAACACACGTaGCGCCCGCCCGTCTGTGCA +
Preference number: 4 (lower is better)
Translates to: LMLQLNATGHIQCFLKQKSSEHT*RPPVCA
Trigger: TGCACAGACGGGCGGGCGTCACGTGTGTTCAGAGCT...TTTCTGCTTCAAAAAGCACTGAATGTGACCTGTTGCATTCAGTTGTAGCATCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp TTGATGCTACAACTGAATGCAACAGGTCACATTCAGTGCTTTTTGAAGCAGAAAGGTGGAGACAAGCTCTaGACACACGTGACGCCCGCC +
Preference number: 4 (lower is better)
Translates to: LMLQLNATGHIQCFLKQKGGDKL*THVTPA
Trigger: GGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACC...TTTCTGCTTCAAAAAGCACTGAATGTGACCTGTTGCATTCAGTTGTAGCATCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp CATCTGAGCCATGACAGTAAGCTCTGCCTTTGGAAAGGAGAGCTCCCACTTCACAAGCAGAAATTGGTCTaGGTGAGGCCAGTGAAAACT +
Preference number: 4 (lower is better)
Translates to: HLSHDSKLCLWKGELPLHKQKLV*VRPVKT
Trigger: AGTTTTCACTGGCCTCACTCAGACCAATTTCTGCTT...GTGAAGTGGGAGCTCTCCTTTCCAAAGGCAGAGCTTACTGTCATGGCTCAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp GTGGGGAAGAAAGAAATCACGGCCACCTGGAATTACAGCCACCCTGAAGAAGGAAAGCAGAAATTGGTCTaGGTGAGGCCAGTGAAAACT +
Preference number: 4 (lower is better)
Translates to: VGKKEITATWNYSHPEEGKQKLV*VRPVKT
Trigger: AGTTTTCACTGGCCTCACTCAGACCAATTTCTGCTT...TCCTTCTTCAGGGTGGCTGTAATTCCAGGTGGCCGTGATTTCTTTCTTCCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp CTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGCTGGAAGTTAAACTTTaGTCTTACTACCAGTTGATT +
Preference number: 4 (lower is better)
Translates to: LPRPRAHMLFCTITRTQPLEVKL*SYYQLI
Trigger: AATCAACTGGTAGTAAGAGCAAAGTTTAACTTCCAG...CGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp GAAATTGGTCTGAGTGAGGCCAGTGAAAACTCCTTACAACAAATCCCAGGAAAACGAGAATCCCAGGGCTaGTGGCACCTTTGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: EIGLSEASENSLQQIPGKRESQG*WHLWSP
Trigger: TGGAGACCAAAGGTGCCAGCAGCCCTGGGATTCTCG...TTTTCCTGGGATTTGTTGTAAGGAGTTTTCACTGGCCTCACTCAGACCAATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp AGAACACAGCCGTTGGAACTGGGCTCACAGCACCTTTGCTGCATATATTCTTCTGTTTGCTTCTGTAGGTaGTCCACCCATTCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: RTQPLELGSQHLCCIYSSVCFCR*STHSCR
Trigger: TCTGCAGGAATGGGTGGAGCACCTACAGAAGCAAAC...AGAAGAATATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp ACATCTAAGAAAAGCAGGCTGCGATACAACAAGCATTTGTTAAGAAAAGCTCAGCGCGGGCTTGCTGTCTaGGTGCTTGCTGGACGGAGT +
Preference number: 4 (lower is better)
Translates to: TSKKSRLRYNKHLLRKAQRGLAV*VLAGRS
Trigger: ACTCCGTCCAGCAAGCACGCAGACAGCAAGCCCGCG...CTGAGCTTTTCTTAACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
ENST00000478679.5
CDS-3UTR GCA 90 bp TTTGTTGTTACTGAACTAGCCTATACAGAACCGTCTGTGTCCTCCCAAAACGCAAACGAGAAAGGCTACTaGGACGCCCCAGGGAGTCTA +
Preference number: 4 (lower is better)
Translates to: FVVTELAYTEPSVSSQNANEKGY*DAPGSL
Trigger: TAGACTCCCTGGGGCGTCGCAGTAGCCTTTCTCGTT...TGCGTTTTGGGAGGACACAGACGGTTCTGTATAGGCTAGTTCAGTAACAACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000218789.9
CDS-3UTR GCA 90 bp CCATTAGCTTGTTCCATGCTGAATGAAGCCACCCAACTTTCTAAACAACGTGCTAACGAGAAAGGCTACTaGGACGCCCCAGGGAGTCTA +
Preference number: 4 (lower is better)
Translates to: PLACSMLNEATQLSKQRANEKGY*DAPGSL
Trigger: TAGACTCCCTGGGGCGTCGCAGTAGCCTTTCTCGTT...AGCACGTTGTTTAGAAAGTTGGGTGGCTTCATTCAGCATGGAACAAGCTAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp AAAGGAAACCAAAAGCAAAGTCCCTGTGGTCACCCTTATTTATTGCTGAAGCAGAGGCTTCGTCTCCTCTaGACTGGAACACAGTGGGGG +
Preference number: 4 (lower is better)
Translates to: KGNQKQSPCGHPYLLLKQRLRLL*TGTQWG
Trigger: CCCCCACTGTGTTCCAGTGCAGAGGAGACGAAGCCT...CTGCTTCAGCAATAAATAAGGGTGACCACAGGGACTTTGCTTTTGGTTTCCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp CAAAGGAGTAACCCTCGGGCAAATCGTGGCCCCTTTAAACGTTTATATCAAGTTGAAGCCAAAGGGGCTTaGTGGGCACCAGAGACTGTA +
Preference number: 4 (lower is better)
Translates to: QRSNPRANRGPFKRLYQVEAKGA*WAPETV
Trigger: TACAGTCTCTGGTGCCCAGCAAGCCCCTTTGGCTTC...AACTTGATATAAACGTTTAAAGGGGCCACGATTTGCCCGAGGGTTACTCCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp AGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAATCACAGCACCTTTGCTaGATATATTCTTCTCATCTC +
Preference number: 4 (lower is better)
Translates to: RPRAHMLFCTITRTQPLESQHLC*IYSSHL
Trigger: GAGATGAGAAGAATATATGCAGCAAAGGTGCTGTGA...TTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp AGAACACAGCCGTTGGAACTGGGCTCACAGCACCTTTGCTGCATATATTCTTCTGCCCACATGCTGTTCTaGACGATTACCAGAACACAG +
Preference number: 4 (lower is better)
Translates to: RTQPLELGSQHLCCIYSSAHMLF*TITRTQ
Trigger: CTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGC...AGAAGAATATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp TTAAGCCTCCACAAAGTACAATGGGAAATATCAGGAACACTCTCAAAAGTTGTTGCCCGTCTGTGCACCTaGCAAGGCCCAGAGCCCACA +
Preference number: 4 (lower is better)
Translates to: LSLHKVQWEISGTLSKVVARLCT*QGPEPT
Trigger: TGTGGGCTCTGGGCCTTGGCAGGTGCACAGACGGGC...AACAACTTTTGAGAGTGTTCCTGATATTTCCCATTGTACTTTGTGGAGGCTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp AGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAACATCAGAGTTCACTCTaGACAAACAAGATCAGAACA +
Preference number: 4 (lower is better)
Translates to: RPRAHMLFCTITRTQPLEHQSSL*TNKIRT
Trigger: TGTTCTGATCTTGTTTGTGCAGAGTGAACTCTGATG...TTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp AGAACACAGCCGTTGGAACTGGGCTCACAGCACCTTTGCTGCATATATTCTTCTCATAAACCCCATCTCTaGCGGAGATTAACACTGGGC +
Preference number: 4 (lower is better)
Translates to: RTQPLELGSQHLCCIYSSHKPHL*RRLTLG
Trigger: GCCCAGTGTTAATCTCCGGCAGAGATGGGGTTTATG...AGAAGAATATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp ACATCTAAGAAAAGCAGGCTGCGATACAACAAGCATTTGTTAAGAAAAGCTCAGCCCCTCCTCGTCTTCTaGACGCTCTGGCTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: TSKKSRLRYNKHLLRKAQPLLVF*TLWLLQ
Trigger: CTGCAGCAGCCAGAGCGTGCAGAAGACGAGGAGGGG...CTGAGCTTTTCTTAACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000478679.5
CDS-3UTR CCA 90 bp TTACGAAGAGCACCCTCGGATGTAGGCTCACGTGAACACACCACCTCCCTCCAATCCTCATTGGTCTGCTaGAAGTTAAACTTTGCTCTT +
Preference number: 4 (lower is better)
Translates to: LRRAPSDVGSREHTTSLQSSLVC*KLNFAL
Trigger: AAGAGCAAAGTTTAACTTCCAGCAGACCAATGAGGA...TTGGAGGGAGGTGGTGTGTTCACGTGAGCCTACATCCGAGGGTGCTCTTCGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp CCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAACTGGGCTCACTCCTCATTGGTCTGCTaGAAGTTAAACTTTGCTCTT +
Preference number: 4 (lower is better)
Translates to: PTCCSARLPEHSRWNWAHSSLVC*KLNFAL
Trigger: AAGAGCAAAGTTTAACTTCCAGCAGACCAATGAGGA...GTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp TATCAAGTTCCCACCCCCTTGGGAGGTCACACGGTGAAACAGACACAGTTATATTCCACACGGGTGACATaGATGACGTCTCCTTTTGAG +
Preference number: 4 (lower is better)
Translates to: YQVPTPLGGHTVKQTQLYSTRVT*MTSPFE
Trigger: CTCAAAAGGAGACGTCATCCATGTCACCCGTGTGGA...ATATAACTGTGTCTGTTTCACCGTGTGACCTCCCAAGGGGGTGGGAACTTGATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp AGGGTGATTGGCACAATACGTGAGGTACAGGGTTTTCATCTGTGGCATCAGGTTTCCACACGGGTGACATaGATGACGTCTCCTTTTGAG +
Preference number: 4 (lower is better)
Translates to: RVIGTIREVQGFHLWHQVSTRVT*MTSPFE
Trigger: CTCAAAAGGAGACGTCATCCATGTCACCCGTGTGGA...AACCTGATGCCACAGATGAAAACCCTGTACCTCACGTATTGTGCCAATCACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR CCA 90 bp TATCAAGTTCCCACCCCCTTGGGAGGTCACACGGTGAAACAGACACAGTTATATTCAGTGTTCCTGATTTaGGAGACACAGGCTTCTCGC +
Preference number: 4 (lower is better)
Translates to: YQVPTPLGGHTVKQTQLYSVFLI*ETQASR
Trigger: GCGAGAAGCCTGTGTCTCCCAAATCAGGAACACTGA...ATATAACTGTGTCTGTTTCACCGTGTGACCTCCCAAGGGGGTGGGAACTTGATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp AAACAATGGCCCTCTGGATGCCACATCGCCACTGCCACAGGAGAACTGTCTTTTTCGTATCAAATCCTTTaGGAGGGCTCTTCAGTGTTC +
Preference number: 4 (lower is better)
Translates to: KQWPSGCHIATATGELSFSYQIL*EGSSVF
Trigger: GAACACTGAAGAGCCCTCCCAAAGGATTTGATACGA...AAAAGACAGTTCTCCTGTGGCAGTGGCGATGTGGCATCCAGAGGGCCATTGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp GCGGGCATGGGACTTCTTATTCACGTAGCTGGAAAGGACATTCTAGCATGGGGAGAGCTTCGGGCAACTTaGTGCATTCTTCTAAAGACT +
Preference number: 4 (lower is better)
Translates to: AGMGLLIHVAGKDILAWGELRAT*CILLKT
Trigger: AGTCTTTAGAAGAATGCACCAAGTTGCCCGAAGCTC...TCCCCATGCTAGAATGTCCTTTCCAGCTACGTGAATAAGAAGTCCCATGCCCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp AAACAATGGCCCTCTGGATGCCACATCGCCACTGCCACAGGAGAACTGTCTTTTGAGCTTCGGGCAACTTaGTGCATTCTTCTAAAGACT +
Preference number: 4 (lower is better)
Translates to: KQWPSGCHIATATGELSFELRAT*CILLKT
Trigger: AGTCTTTAGAAGAATGCACCAAGTTGCCCGAAGCTC...AAAAGACAGTTCTCCTGTGGCAGTGGCGATGTGGCATCCAGAGGGCCATTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp CATCTGAGCCATGACAGTAAGCTCTGCCTTTGGAAAGGAGAGCTCCCACTTCACGAGCTTCGGGCAACTTaGTGCATTCTTCTAAAGACT +
Preference number: 4 (lower is better)
Translates to: HLSHDSKLCLWKGELPLHELRAT*CILLKT
Trigger: AGTCTTTAGAAGAATGCACCAAGTTGCCCGAAGCTC...GTGAAGTGGGAGCTCTCCTTTCCAAAGGCAGAGCTTACTGTCATGGCTCAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp GTGTATTTTGTTGTTACTGAACTAGCCTATACAGAACCGTCTGTGTCCTCCCAACCTCCCAGTTCCGGATaGCTTCCGTCAGGATCTGCA +
Preference number: 4 (lower is better)
Translates to: VYFVVTELAYTEPSVSSQPPSSG*LPSGSA
Trigger: TGCAGATCCTGACGGAAGCCATCCGGAACTGGGAGG...TTGGGAGGACACAGACGGTTCTGTATAGGCTAGTTCAGTAACAACAAAATACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp AGAACACAGCCGTTGGAACTGGGCTCACAGCACCTTTGCTGCATATATTCTTCTCTGAATGAGGCTTTATaGTGGGGTTTCCCACAGACG +
Preference number: 4 (lower is better)
Translates to: RTQPLELGSQHLCCIYSSLNEAL*WGFPQT
Trigger: CGTCTGTGGGAAACCCCACCATAAAGCCTCATTCAG...AGAAGAATATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp CTTCTTATTCACGTAGCTGGAAAGGACATTCTAGCATGGGGATTAGCCCGGACAGTTCAGGTTTGCGCTTaGGCAGCAGCTTTTTCATGG +
Preference number: 4 (lower is better)
Translates to: LLIHVAGKDILAWGLARTVQVCA*AAAFSW
Trigger: CCATGAAAAAGCTGCTGCCCAAGCGCAAACCTGAAC...TGTCCGGGCTAATCCCCATGCTAGAATGTCCTTTCCAGCTACGTGAATAAGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp AAAACAGTGTATTTTGTTGTTACTGAACTAGCCTATACAGAACCGTCTGTGTCCGAGTGCACCCCGACTTaGGTCAGGGGTGCCCAGCTT +
Preference number: 4 (lower is better)
Translates to: KTVYFVVTELAYTEPSVSECTPT*VRGAQL
Trigger: AAGCTGGGCACCCCTGACCCAAGTCGGGGTGCACTC...GGACACAGACGGTTCTGTATAGGCTAGTTCAGTAACAACAAAATACACTGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp AGGGGAAGGGCTGTTAAAAACACAAGTATTCTTGTGAAATACTTCGATCTGAGCGGCTACGGCCAATGGTaGAGGAGACCTCGGGATGAG +
Preference number: 4 (lower is better)
Translates to: RGRAVKNTSILVKYFDLSGYGQW*RRPRDE
Trigger: CTCATCCCGAGGTCTCCTCCACCATTGGCCGTAGCC...GCTCAGATCGAAGTATTTCACAAGAATACTTGTGTTTTTAACAGCCCTTCCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp TCCACCAGGCTTCTGCTTCCGGTGGATGCGGGCATGGGACTTCTTATTCACGTAAAAGCAAAGTCCCTGTaGTCACCCTTATTTATTGCT +
Preference number: 4 (lower is better)
Translates to: STRLLLPVDAGMGLLIHVKAKSL*SPLFIA
Trigger: AGCAATAAATAAGGGTGACCACAGGGACTTTGCTTT...TACGTGAATAAGAAGTCCCATGCCCGCATCCACCGGAAGCAGAAGCCTGGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp ACGGTGAAACAGACACAGTTATATACAACAGGGCAGGTTTTTAAAAAGAGTTGCGCAGGAGATCCGTCCTaGGGACTCGGACAGCAACGC +
Preference number: 4 (lower is better)
Translates to: TVKQTQLYTTGQVFKKSCAGDPS*GLGQQR
Trigger: GCGTTGCTGTCCGAGTCCCCAGGACGGATCTCCTGC...GCAACTCTTTTTAAAAACCTGCCCTGTTGTATATAACTGTGTCTGTTTCACCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp TCCACCAGGCTTCTGCTTCCGGTGGATGCGGGCATGGGACTTCTTATTCACGTACTACAGGATAAGAAATaGCTTCATCTCCTCATCCAT +
Preference number: 4 (lower is better)
Translates to: STRLLLPVDAGMGLLIHVLQDKK*LHLLIH
Trigger: ATGGATGAGGAGATGAAGCCATTTCTTATCCTGTAG...TACGTGAATAAGAAGTCCCATGCCCGCATCCACCGGAAGCAGAAGCCTGGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp ATAGTCAGTCATTCGAATGTATACTCGCATCGGCAGTTAAGCCTCCACAAAGTACCAGAACACAGCCGTTaGAACTGGGCTCACAGCACC +
Preference number: 4 (lower is better)
Translates to: IVSHSNVYSHRQLSLHKVPEHSR*NWAHST
Trigger: GGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCTGG...TACTTTGTGGAGGCTTAACTGCCGATGCGAGTATACATTCGAATGACTGACTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp CATCTGAGCCATGACAGTAAGCTCTGCCTTTGGAAAGGAGAGCTCCCACTTCACCAATTCAGGGAAGTTTaGGGTGAAGATGCGAGTGAA +
Preference number: 4 (lower is better)
Translates to: HLSHDSKLCLWKGELPLHQFREV*GEDASE
Trigger: TTCACTCGCATCTTCACCCCAAACTTCCCTGAATTG...GTGAAGTGGGAGCTCTCCTTTCCAAAGGCAGAGCTTACTGTCATGGCTCAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp AAAGTAGAAACAATGGCCCTCTGGATGCCACATCGCCACTGCCACAGGAGAACTCAATTCAGGGAAGTTTaGGGTGAAGATGCGAGTGAA +
Preference number: 4 (lower is better)
Translates to: KVETMALWMPHRHCHRRTQFREV*GEDASE
Trigger: TTCACTCGCATCTTCACCCCAAACTTCCCTGAATTG...AGTTCTCCTGTGGCAGTGGCGATGTGGCATCCAGAGGGCCATTGTTTCTACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp CATCTGAGCCATGACAGTAAGCTCTGCCTTTGGAAAGGAGAGCTCCCACTTCACAAGCAGACAAGAGAATaGTGGTTACCAGATGCTGAG +
Preference number: 4 (lower is better)
Translates to: HLSHDSKLCLWKGELPLHKQTRE*WLPDAE
Trigger: CTCAGCATCTGGTAACCACCATTCTCTTGTCTGCTT...GTGAAGTGGGAGCTCTCCTTTCCAAAGGCAGAGCTTACTGTCATGGCTCAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375741.6
CDS-3UTR CCA 90 bp GTGGGGAAGAAAGAAATCACGGCCACCTGGAATTACAGCCACCCTGAAGAAGGACAAATAGAGCGTGCATaGGACAGAACACAATTTGGC +
Preference number: 4 (lower is better)
Translates to: VGKKEITATWNYSHPEEGQIERA*DRTQFG
Trigger: GCCAAATTGTGTTCTGTCCCATGCACGCTCTATTTG...TCCTTCTTCAGGGTGGCTGTAATTCCAGGTGGCCGTGATTTCTTTCTTCCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp GCTTGTTCCATGCTGAATGAAGCCACCCAACTTTCTAAACAACGTGCTACTGCCGAAATCACGGCCACCTaGAATTACAGCCACCCTGAA +
Preference number: 4 (lower is better)
Translates to: ACSMLNEATQLSKQRATAEITAT*NYSHPE
Trigger: TTCAGGGTGGCTGTAATTCCAGGTGGCCGTGATTTC...GGCAGTAGCACGTTGTTTAGAAAGTTGGGTGGCTTCATTCAGCATGGAACAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp CCTCTACTACAGTCCAGTAGTCTACACTTGCAGAGGCTGAATGCTTCAGCTTTCGAAATCACGGCCACCTaGAATTACAGCCACCCTGAA +
Preference number: 4 (lower is better)
Translates to: PLLQSSSLHLQRLNASAFEITAT*NYSHPE
Trigger: TTCAGGGTGGCTGTAATTCCAGGTGGCCGTGATTTC...GAAAGCTGAAGCATTCAGCCTCTGCAAGTGTAGACTACTGGACTGTAGTAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp CCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAACTGGGCTCACTACAAAATCTTCCAATaGTGTGAGCAGTTCAGTAGC +
Preference number: 4 (lower is better)
Translates to: PTCCSARLPEHSRWNWAHYKIFQ*CEQFSS
Trigger: GCTACTGAACTGCTCACACCATTGGAAGATTTTGTA...GTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR CAA 72 bp CAGAACACAGCCGTTGGAACTGGGCTCACAGCACCTTaGCTGCATATATTCTTCTCATCTCTCCACAACTAC +
Preference number: 4 (lower is better)
Translates to: QNTAVGTGLTAP*LHIFFSSLHNY
Trigger: GTAGTTGTGGAGAGATGAGAAGAATATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR CAA 72 bp CTGCACAAACAAGATCAGAACACTGAATACGTGGGTTaGGCGAAGGAGTGGGCAGTGGGGAAGAAAGAAATC +
Preference number: 4 (lower is better)
Translates to: LHKQDQNTEYVG*AKEWAVGKKEI
Trigger: GATTTCTTTCTTCCCCACTGCCCACTCCTTCGCCAAACCCACGTATTCAGTGTTCTGATCTTGTTTGTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp CATCTGAGCCATGACAGTAAGCTCTGCCTTTGGAAAGGAGAGCTCCCACTTCACGCTCTTACTACCAGTTaGTTGTTGCTATTATCGGTC +
Preference number: 4 (lower is better)
Translates to: HLSHDSKLCLWKGELPLHALTTS*LLLLSV
Trigger: GACCGATAATAGCAACAATCAACTGGTAGTAAGAGC...GTGAAGTGGGAGCTCTCCTTTCCAAAGGCAGAGCTTACTGTCATGGCTCAGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp GTGGGGAAGAAAGAAATCACGGCCACCTGGAATTACAGCCACCCTGAAGAAGGAGCTCTTACTACCAGTTaGTTGTTGCTATTATCGGTC +
Preference number: 4 (lower is better)
Translates to: VGKKEITATWNYSHPEEGALTTS*LLLLSV
Trigger: GACCGATAATAGCAACAATCAACTGGTAGTAAGAGC...TCCTTCTTCAGGGTGGCTGTAATTCCAGGTGGCCGTGATTTCTTTCTTCCCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp TTAAGCCTCCACAAAGTACAATGGGAAATATCAGGAACACTCTCAAAAGTTGTTGCTTCTCGCTGGCCTTaGCCTCGCGCACGTAGTTGC +
Preference number: 4 (lower is better)
Translates to: LSLHKVQWEISGTLSKVVASRWP*PRARSC
Trigger: GCAACTACGTGCGCGAGGTCAAGGCCAGCGAGAAGC...AACAACTTTTGAGAGTGTTCCTGATATTTCCCATTGTACTTTGTGGAGGCTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp ACATCTAAGAAAAGCAGGCTGCGATACAACAAGCATTTGTTAAGAAAAGCTCAGCCTCCGACTCTCTGCTaGGCTTCGGGCAACTTGGTG +
Preference number: 4 (lower is better)
Translates to: TSKKSRLRYNKHLLRKAQPPTLC*ASGNLV
Trigger: CACCAAGTTGCCCGAAGCTCAGCAGAGAGTCGGAGG...CTGAGCTTTTCTTAACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
ENST00000478679.5
CDS-3UTR TCA 90 bp ATAGTCAGTCATTCGAATGTATACTCGCATCGGCAGTTAAGCCTCCACAAAGTACACCTTTGGTCTCCATaGACTCCCCCAACTCCTCAC +
Preference number: 4 (lower is better)
Translates to: IVSHSNVYSHRQLSLHKVHLWSP*TPPTPH
Trigger: GTGAGGAGTTGGGGGAGTTCATGGAGACCAAAGGTG...TACTTTGTGGAGGCTTAACTGCCGATGCGAGTATACATTCGAATGACTGACTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp TCCACCAGGCTTCTGCTTCCGGTGGATGCGGGCATGGGACTTCTTATTCACGTAGTATTTTGTTGTTACTaGACTAGCCTATACAGAACC +
Preference number: 4 (lower is better)
Translates to: STRLLLPVDAGMGLLIHVVFCCY*TSLYRT
Trigger: GGTTCTGTATAGGCTAGTTCAGTAACAACAAAATAC...TACGTGAATAAGAAGTCCCATGCCCGCATCCACCGGAAGCAGAAGCCTGGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp CTGTGGTCACCCTTATTTATTGCTGAAGCAGAACGAAAACCTGCTCCACGGGCCACCCTTATTTATTGCTaGAGCAGAACGAAAACCTGC +
Preference number: 4 (lower is better)
Translates to: LWSPLFIAEAERKPAPRATLIYC*SRTKTC
Trigger: GCAGGTTTTCGTTCTGCTTCAGCAATAAATAAGGGT...GGCCCGTGGAGCAGGTTTTCGTTCTGCTTCAGCAATAAATAAGGGTGACCACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp AAAGTAGAAACAATGGCCCTCTGGATGCCACATCGCCACTGCCACAGGAGAACTCTCTCCACAACTACTTaGTCAGTGTTCATAGCACTT +
Preference number: 4 (lower is better)
Translates to: KVETMALWMPHRHCHRRTLSTTT*SVFIAL
Trigger: AAGTGCTATGAACACTGATCAAGTAGTTGTGGAGAG...AGTTCTCCTGTGGCAGTGGCGATGTGGCATCCAGAGGGCCATTGTTTCTACTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp GCTTGTTCCATGCTGAATGAAGCCACCCAACTTTCTAAACAACGTGCTACTGCCATGCGAGTGAACATCTaGGCCATGACAGTAAGCTCT +
Preference number: 4 (lower is better)
Translates to: ACSMLNEATQLSKQRATAMRVNI*AMTVSS
Trigger: AGAGCTTACTGTCATGGCTCAGATGTTCACTCGCAT...GGCAGTAGCACGTTGTTTAGAAAGTTGGGTGGCTTCATTCAGCATGGAACAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp CCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAACTGGGCTCACTATTATCAGCATGACTaGAGTCCCACAAAAGTAGAA +
Preference number: 4 (lower is better)
Translates to: PTCCSARLPEHSRWNWAHYYQHD*SPTKVE
Trigger: TTCTACTTTTGTGGGACTTCAGTCATGCTGATAATA...GTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp TTACGAAGAGCACCCTCGGATGTAGGCTCACGTGAACACACCACCTCCCTCCAATATTATCAGCATGACTaGAGTCCCACAAAAGTAGAA +
Preference number: 4 (lower is better)
Translates to: LRRAPSDVGSREHTTSLQYYQHD*SPTKVE
Trigger: TTCTACTTTTGTGGGACTTCAGTCATGCTGATAATA...TTGGAGGGAGGTGGTGTGTTCACGTGAGCCTACATCCGAGGGTGCTCTTCGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp CATCTGAGCCATGACAGTAAGCTCTGCCTTTGGAAAGGAGAGCTCCCACTTCACCTGATACAAATCATTTaGATCAAACGTCTCCAGCCG +
Preference number: 4 (lower is better)
Translates to: HLSHDSKLCLWKGELPLHLIQII*IKRLQP
Trigger: CGGCTGGAGACGTTTGATGCAAATGATTTGTATCAG...GTGAAGTGGGAGCTCTCCTTTCCAAAGGCAGAGCTTACTGTCATGGCTCAGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317133.9
CDS-3UTR GCA 90 bp TTTGTTGTTACTGAACTAGCCTATACAGAACCGTCTGTGTCCTCCCAAAACGCAAGTCAAAAGACTTTATaGGGTGAGACGAGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: FVVTELAYTEPSVSSQNASQKTL*GETRAG
Trigger: CCCGGCCCTCGTCTCACCGCATAAAGTCTTTTGACT...TGCGTTTTGGGAGGACACAGACGGTTCTGTATAGGCTAGTTCAGTAACAACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp AAAGTAGAAACAATGGCCCTCTGGATGCCACATCGCCACTGCCACAGGAGAACTTCGTCCTCATTGGTCTaGTGGAAGTTAAACTTTGCT +
Preference number: 4 (lower is better)
Translates to: KVETMALWMPHRHCHRRTSSSLV*WKLNFA
Trigger: AGCAAAGTTTAACTTCCAGCAGACCAATGAGGACGA...AGTTCTCCTGTGGCAGTGGCGATGTGGCATCCAGAGGGCCATTGTTTCTACTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp GACCTGGGACATGTAAGTGACGTTGCCCAGAGTTTTAATGTCATCGCCCTCCCATCGTCCTCATTGGTCTaGTGGAAGTTAAACTTTGCT +
Preference number: 4 (lower is better)
Translates to: DLGHVSDVAQSFNVIALPSSSLV*WKLNFA
Trigger: AGCAAAGTTTAACTTCCAGCAGACCAATGAGGACGA...TGGGAGGGCGATGACATTAAAACTCTGGGCAACGTCACTTACATGTCCCAGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR GCA 90 bp AAAGTAGAAACAATGGCCCTCTGGATGCCACATCGCCACTGCCACAGGAGAACTCTTCGGGCAACTTGGTaGATTCTTCTAAAGACTGTA +
Preference number: 4 (lower is better)
Translates to: KVETMALWMPHRHCHRRTLRATW*ILLKTV
Trigger: TACAGTCTTTAGAAGAATGCACCAAGTTGCCCGAAG...AGTTCTCCTGTGGCAGTGGCGATGTGGCATCCAGAGGGCCATTGTTTCTACTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp CCTCTGCACTGGAACACAGTGGGGGAAACGTTCCCTGCTTATGCCTATGTTACTCTTCGGGCAACTTGGTaGATTCTTCTAAAGACTGTA +
Preference number: 4 (lower is better)
Translates to: PLHWNTVGETFPAYAYVTLRATW*ILLKTV
Trigger: TACAGTCTTTAGAAGAATGCACCAAGTTGCCCGAAG...AGTAACATAGGCATAAGCAGGGAACGTTTCCCCCACTGTGTTCCAGTGCAGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp GGATTTGATGCTACAACTGAATGCAACAGGTCACATTCAGTGCTTTTTGAAGCACGAGAATCCCAGGGCTaGTGGCACCTTTGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: GFDATTECNRSHSVLFEARESQG*WHLWSP
Trigger: TGGAGACCAAAGGTGCCAGCAGCCCTGGGATTCTCG...TGCTTCAAAAAGCACTGAATGTGACCTGTTGCATTCAGTTGTAGCATCAAATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp CCTCTACTACAGTCCAGTAGTCTACACTTGCAGAGGCTGAATGCTTCAGCTTTCGATCCTGCTGGTTGTTaGACGACACTAATATCCGCT +
Preference number: 4 (lower is better)
Translates to: PLLQSSSLHLQRLNASAFDPAGC*TTLISA
Trigger: AGCGGATATTAGTGTCGTGCAACAACCAGCAGGATC...GAAAGCTGAAGCATTCAGCCTCTGCAAGTGTAGACTACTGGACTGTAGTAGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp GCTTGTTCCATGCTGAATGAAGCCACCCAACTTTCTAAACAACGTGCTACTGCCGATCCTGCTGGTTGTTaGACGACACTAATATCCGCT +
Preference number: 4 (lower is better)
Translates to: ACSMLNEATQLSKQRATADPAGC*TTLISA
Trigger: AGCGGATATTAGTGTCGTGCAACAACCAGCAGGATC...GGCAGTAGCACGTTGTTTAGAAAGTTGGGTGGCTTCATTCAGCATGGAACAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp TATCAAGTTCCCACCCCCTTGGGAGGTCACACGGTGAAACAGACACAGTTATATGATCCTGCTGGTTGTTaGACGACACTAATATCCGCT +
Preference number: 4 (lower is better)
Translates to: YQVPTPLGGHTVKQTQLYDPAGC*TTLISA
Trigger: AGCGGATATTAGTGTCGTGCAACAACCAGCAGGATC...ATATAACTGTGTCTGTTTCACCGTGTGACCTCCCAAGGGGGTGGGAACTTGATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp AGGGTGATTGGCACAATACGTGAGGTACAGGGTTTTCATCTGTGGCATCAGGTTGATCCTGCTGGTTGTTaGACGACACTAATATCCGCT +
Preference number: 4 (lower is better)
Translates to: RVIGTIREVQGFHLWHQVDPAGC*TTLISA
Trigger: AGCGGATATTAGTGTCGTGCAACAACCAGCAGGATC...AACCTGATGCCACAGATGAAAACCCTGTACCTCACGTATTGTGCCAATCACCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR GCA 90 bp CACTACTGCACGAAGAGGGCCAAAGATCTGCAGAGAAATGTGAAGCAAGTGTTTGTTTGCTTCTGTAGGTaGTCCACCCATTCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: HYCTKRAKDLQRNVKQVFVCFCR*STHSCR
Trigger: TCTGCAGGAATGGGTGGAGCACCTACAGAAGCAAAC...AAACACTTGCTTCACATTTCTCTGCAGATCTTTGGCCCTCTTCGTGCAGTAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544132.2
CDS-3UTR GCA 90 bp GAACACTCATTGGAAAACAATTCACTACTGCACGAAGAGGGCCAAAGATCTGCAGACGTGACCTTCGTTTaGTTCTGTAGGTGCTCCACC +
Preference number: 4 (lower is better)
Translates to: EHSLENNSLLHEEGQRSADVTFV*FCRCST
Trigger: GGTGGAGCACCTACAGAAGCAAACGAAGGTCACGTC...TGCAGATCTTTGGCCCTCTTCGTGCAGTAGTGAATTGTTTTCCAATGAGTGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544132.2
CDS-3UTR GCA 90 bp ACATCTAAGAAAAGCAGGCTGCGATACAACAAGCATTTGTTAAGAAAAGCTCAGGGCTTGCTGTCTGCGTaGTTGCTGGACGGAGTGACC +
Preference number: 4 (lower is better)
Translates to: TSKKSRLRYNKHLLRKAQGLLSA*LLDGVT
Trigger: GGTCACTCCGTCCAGCAAGCACGCAGACAGCAAGCC...CTGAGCTTTTCTTAACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
ENST00000478679.5
CDS-3UTR GCA 90 bp CAAAGGAGTAACCCTCGGGCAAATCGTGGCCCCTTTAAACGTTTATATCAAGTTGCTTCCGTTCAGGTTTaGGCTTGGGCAGCAGCTTTT +
Preference number: 4 (lower is better)
Translates to: QRSNPRANRGPFKRLYQVASVQV*AWAAAF
Trigger: AAAAGCTGCTGCCCAAGCGCAAACCTGAACGGAAGC...AACTTGATATAAACGTTTAAAGGGGCCACGATTTGCCCGAGGGTTACTCCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp GTGGGGAAGAAAGAAATCACGGCCACCTGGAATTACAGCCACCCTGAAGAAGGAATCAGGTCAGTGCCTTaGCATGTTGAATTGAGTGTT +
Preference number: 4 (lower is better)
Translates to: VGKKEITATWNYSHPEEGIRSVP*HVELSV
Trigger: AACACTCAATTCAACATGGCAAGGCACTGACCTGAT...TCCTTCTTCAGGGTGGCTGTAATTCCAGGTGGCCGTGATTTCTTTCTTCCCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp ACAGGCTTCGTCTCCTCTGCACTGGAACACAGTGGGGGAAACGTTCCCTGCTTAGAACCACCACAGGTATaGATTCAAAATGGGATATTT +
Preference number: 4 (lower is better)
Translates to: TGFVSSALEHSGGNVPCLEPPQV*IQNGIF
Trigger: AAATATCCCATTTTGAATGCATACCTGTGGTGGTTC...TAAGCAGGGAACGTTTCCCCCACTGTGTTCCAGTGCAGAGGAGACGAAGCCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp TCAGGTCCTCAGAGTCAATCCCTCCTGTCTGGATTCATCAGTCATGGTTTGATCCAGACGCATTTTTCCTaGTCCCTAAAAAGCCGAGGA +
Preference number: 4 (lower is better)
Translates to: SGPQSQSLLSGFISHGLIQTHFS*SLKSRG
Trigger: TCCTCGGCTTTTTAGGGAGCAGGAAAAATGCGTCTG...GATCAAACCATGACTGATGAATCCAGACAGGAGGGATTGACTCTGAGGACCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp CCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAACTGGGCTCACTATAACAGAAATCACTaGAATTCAGGGAAGTTTGGG +
Preference number: 4 (lower is better)
Translates to: PTCCSARLPEHSRWNWAHYNRNH*NSGKFG
Trigger: CCCAAACTTCCCTGAATTGCAGTGATTTCTGTTATA...GTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp ACCTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCTTTATACTATGGGGTTaGTGTAAATGGAGTTTCACT +
Preference number: 4 (lower is better)
Translates to: TCQGPEPTCCSARLPEHSFILWG*CKWSFT
Trigger: AGTGAAACTCCATTTACAGCAACCCCATAGTATAAA...GCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp CGATTACCAGAACACAGCCGTTGGAACTGGGCTCACAGCACCTTTGCTGCATATGATGCTACAACTGAATaGAACAGGTCACATTCAGTG +
Preference number: 4 (lower is better)
Translates to: RLPEHSRWNWAHSTFAAYDATTE*NRSHSV
Trigger: CACTGAATGTGACCTGTTGCATTCAGTTGTAGCATC...ATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp CAGAGTTTTAATGTCATCGCCCTCCCAGTTCCGGATGGCTTCCGTCAGGATCTGTCCTCATTGGTCTGCTaGAAGTTAAACTTTGCTCTT +
Preference number: 4 (lower is better)
Translates to: QSFNVIALPVPDGFRQDLSSLVC*KLNFAL
Trigger: AAGAGCAAAGTTTAACTTCCAGCAGACCAATGAGGA...CAGATCCTGACGGAAGCCATCCGGAACTGGGAGGGCGATGACATTAAAACTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR CCA 90 bp AGCACCTCTGAACTGTGCGTGAGGAGGCACAATTCAGGGTTGTTTCTCGAGAACTGTCATTCCTGTCGTTaGAAGCTTTCCCTGATAGAT +
Preference number: 4 (lower is better)
Translates to: STSELCVRRHNSGLFLENCHSCR*KLSLID
Trigger: ATCTATCAGGGAAAGCTTCCAACGACAGGAATGACA...GTTCTCGAGAAACAACCCTGAATTGTGCCTCCTCACGCACAGTTCAGAGGTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544132.2
CDS-3UTR CCA 90 bp AGAACACAGCCGTTGGAACTGGGCTCACAGCACCTTTGCTGCATATATTCTTCTTCCTGCAGATCCTGCTaGTTGTTGCACGACACTAAT +
Preference number: 4 (lower is better)
Translates to: RTQPLELGSQHLCCIYSSSCRSC*LLHDTN
Trigger: ATTAGTGTCGTGCAACAACCAGCAGGATCTGCAGGA...AGAAGAATATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp CACTACTGCACGAAGAGGGCCAAAGATCTGCAGAGAAATGTGAAGCAAGTGTTTCTGAATGAGGCTTTATaGTGGGGTTTCCCACAGACG +
Preference number: 4 (lower is better)
Translates to: HYCTKRAKDLQRNVKQVFLNEAL*WGFPQT
Trigger: CGTCTGTGGGAAACCCCACCATAAAGCCTCATTCAG...AAACACTTGCTTCACATTTCTCTGCAGATCTTTGGCCCTCTTCGTGCAGTAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544132.2
CDS-3UTR CCA 90 bp CCTCTACTACAGTCCAGTAGTCTACACTTGCAGAGGCTGAATGCTTCAGCTTTCGTGTTTGCCTTGTTTTaGCGCTGGTGCAGTAAGCTT +
Preference number: 4 (lower is better)
Translates to: PLLQSSSLHLQRLNASAFVFALF*RWCSKL
Trigger: AAGCTTACTGCACCAGCGCCAAAACAAGGCAAACAC...GAAAGCTGAAGCATTCAGCCTCTGCAAGTGTAGACTACTGGACTGTAGTAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp CATCTGAGAATCACAGTACTCAGACAGCGGACAAGAGCAAACACCTCTAGGTGGACATCCCTTATAGATTaGTCTCATCCCAGGCAGGAT +
Preference number: 4 (lower is better)
Translates to: HLRITVLRQRTRANTSRWTSLID*SHPRQD
Trigger: ATCCTGCCTGGGATGAGACCAATCTATAAGGGATGT...CCACCTAGAGGTGTTTGCTCTTGTCCGCTGTCTGAGTACTGTGATTCTCAGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp AGAACCGTAAACAGCAACACAACACTCTCCCAAGGTGCCCAGCTCAAAGGCATCTGGATTCATCAGTCATaGTTTGATCGTCTCCATTCG +
Preference number: 4 (lower is better)
Translates to: RTVNSNTTLSQGAQLKGIWIHQS*FDRLHS
Trigger: CGAATGGAGACGATCAAACCATGACTGATGAATCCA...GATGCCTTTGAGCTGGGCACCTTGGGAGAGTGTTGTGTTGCTGTTTACGGTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp TCAGGTCCTCAGAGTCAATCCCTCCTGTCTGGATTCATCAGTCATGGTTTGATCAAGGACATTCTAGCATaGGGATTAGCCCGGACAGAA +
Preference number: 4 (lower is better)
Translates to: SGPQSQSLLSGFISHGLIKDILA*GLARTE
Trigger: TTCTGTCCGGGCTAATCCCCATGCTAGAATGTCCTT...GATCAAACCATGACTGATGAATCCAGACAGGAGGGATTGACTCTGAGGACCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp TATCAAGTTCCCACCCCCTTGGGAGGTCACACGGTGAAACAGACACAGTTATATAAGGACATTCTAGCATaGGGATTAGCCCGGACAGAA +
Preference number: 4 (lower is better)
Translates to: YQVPTPLGGHTVKQTQLYKDILA*GLARTE
Trigger: TTCTGTCCGGGCTAATCCCCATGCTAGAATGTCCTT...ATATAACTGTGTCTGTTTCACCGTGTGACCTCCCAAGGGGGTGGGAACTTGATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp CTTCTTATTCACGTAGCTGGAAAGGACATTCTAGCATGGGGATTAGCCCGGACATATCAGCCTGCAGCATaGCCTCCATCTGTTTTCATC +
Preference number: 4 (lower is better)
Translates to: LLIHVAGKDILAWGLARTYQPAA*PPSVFI
Trigger: GATGAAAACAGATGGAGGCCATGCTGCAGGCTGATA...TGTCCGGGCTAATCCCCATGCTAGAATGTCCTTTCCAGCTACGTGAATAAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp AAAGGAAACCAAAAGCAAAGTCCCTGTGGTCACCCTTATTTATTGCTGAAGCAGTCGTCTCCTCTGCACTaGAACACAGTGGGGGAAACG +
Preference number: 4 (lower is better)
Translates to: KGNQKQSPCGHPYLLLKQSSPLH*NTVGET
Trigger: CGTTTCCCCCACTGTGTTCCAGTGCAGAGGAGACGA...CTGCTTCAGCAATAAATAAGGGTGACCACAGGGACTTTGCTTTTGGTTTCCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp AGAACACAGCCGTTGGAACTGGGCTCACAGCACCTTTGCTGCATATATTCTTCTTGGGGTTGCTGTAAATaGAGTTTCACTGCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: RTQPLELGSQHLCCIYSSWGCCK*SFTAAG
Trigger: ACCAGCTGCAGTGAAACTCCATTTACAGCAACCCCA...AGAAGAATATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp TTACGAAGAGCACCCTCGGATGTAGGCTCACGTGAACACACCACCTCCCTCCAATGTGGTTTTATACTATaGGGTTGCTGTAAATGGAGT +
Preference number: 4 (lower is better)
Translates to: LRRAPSDVGSREHTTSLQCGFIL*GCCKWS
Trigger: ACTCCATTTACAGCAACCCCATAGTATAAAACCACA...TTGGAGGGAGGTGGTGTGTTCACGTGAGCCTACATCCGAGGGTGCTCTTCGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp CCTCTACTACAGTCCAGTAGTCTACACTTGCAGAGGCTGAATGCTTCAGCTTTCCAGACAAGAGAATGGTaGTTACCAGATGCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: PLLQSSSLHLQRLNASAFQTREW*LPDAEE
Trigger: CTCCTCAGCATCTGGTAACCACCATTCTCTTGTCTG...GAAAGCTGAAGCATTCAGCCTCTGCAAGTGTAGACTACTGGACTGTAGTAGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375741.6
CDS-3UTR CCA 90 bp GAAATTGGTCTGAGTGAGGCCAGTGAAAACTCCTTACAACAAATCCCAGGAAAAGAAACAATGGCCCTCTaGATGCCACATCGCCACTGC +
Preference number: 4 (lower is better)
Translates to: EIGLSEASENSLQQIPGKETMAL*MPHRHC
Trigger: GCAGTGGCGATGTGGCATCCAGAGGGCCATTGTTTC...TTTTCCTGGGATTTGTTGTAAGGAGTTTTCACTGGCCTCACTCAGACCAATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp ACATCTAAGAAAAGCAGGCTGCGATACAACAAGCATTTGTTAAGAAAAGCTCAGGTCTTCTGCACGCTCTaGCTGCTGCAGGACCCCATG +
Preference number: 4 (lower is better)
Translates to: TSKKSRLRYNKHLLRKAQVFCTL*LLQDPM
Trigger: CATGGGGTCCTGCAGCAGCCAGAGCGTGCAGAAGAC...CTGAGCTTTTCTTAACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000478679.5
CDS-3UTR TCA 90 bp TTAAGCCTCCACAAAGTACAATGGGAAATATCAGGAACACTCTCAAAAGTTGTTCCTCCGACTCTCTGCTaGGCTTCGGGCAACTTGGTG +
Preference number: 4 (lower is better)
Translates to: LSLHKVQWEISGTLSKVVPPTLC*ASGNLV
Trigger: CACCAAGTTGCCCGAAGCTCAGCAGAGAGTCGGAGG...AACAACTTTTGAGAGTGTTCCTGATATTTCCCATTGTACTTTGTGGAGGCTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp TCCCAGAGAAGTGAAGAAATGATTGGCATTAAGGAGTCCACACAACCAGGGCAGGATTGGCACAATACGTaGGGTACAGGGTTTTCATCT +
Preference number: 4 (lower is better)
Translates to: SQRSEEMIGIKESTQPGQDWHNT*GTGFSS
Trigger: AGATGAAAACCCTGTACCTCACGTATTGTGCCAATC...CTGCCCTGGTTGTGTGGACTCCTTAATGCCAATCATTTCTTCACTTCTCTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp TCAGGTCCTCAGAGTCAATCCCTCCTGTCTGGATTCATCAGTCATGGTTTGATCGATTGGCACAATACGTaGGGTACAGGGTTTTCATCT +
Preference number: 4 (lower is better)
Translates to: SGPQSQSLLSGFISHGLIDWHNT*GTGFSS
Trigger: AGATGAAAACCCTGTACCTCACGTATTGTGCCAATC...GATCAAACCATGACTGATGAATCCAGACAGGAGGGATTGACTCTGAGGACCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp CCTGCTACAACAGCAAACTCCAATAAACTCAAGTTGAATGGTTTCCCACTGCAACCTCACTGTGTTCCGTaGGGACATTCACTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: PATTANSNKLKLNGFPLQPHCVP*GHSLQK
Trigger: CTTCTGCAGTGAATGTCCTCACGGAACACAGTGAGG...TTGCAGTGGGAAACCATTCAACTTGAGTTTATTGGAGTTTGCTGTTGTAGCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp TCCCAGAGAAGTGAAGAAATGATTGGCATTAAGGAGTCCACACAACCAGGGCAGGGGCTGAAAGGTTTTTaGAGGCAGCCATGGATTTTT +
Preference number: 4 (lower is better)
Translates to: SQRSEEMIGIKESTQPGQGLKGF*RQPWIF
Trigger: AAAAATCCATGGCTGCCTTCAAAAACCTTTCAGCCC...CTGCCCTGGTTGTGTGGACTCCTTAATGCCAATCATTTCTTCACTTCTCTGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp TCAGGTCCTCAGAGTCAATCCCTCCTGTCTGGATTCATCAGTCATGGTTTGATCGGGCTGAAAGGTTTTTaGAGGCAGCCATGGATTTTT +
Preference number: 4 (lower is better)
Translates to: SGPQSQSLLSGFISHGLIGLKGF*RQPWIF
Trigger: AAAAATCCATGGCTGCCTTCAAAAACCTTTCAGCCC...GATCAAACCATGACTGATGAATCCAGACAGGAGGGATTGACTCTGAGGACCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp GCTTGTTCCATGCTGAATGAAGCCACCCAACTTTCTAAACAACGTGCTACTGCCGGGCTGAAAGGTTTTTaGAGGCAGCCATGGATTTTT +
Preference number: 4 (lower is better)
Translates to: ACSMLNEATQLSKQRATAGLKGF*RQPWIF
Trigger: AAAAATCCATGGCTGCCTTCAAAAACCTTTCAGCCC...GGCAGTAGCACGTTGTTTAGAAAGTTGGGTGGCTTCATTCAGCATGGAACAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp AGGGGAAGGGCTGTTAAAAACACAAGTATTCTTGTGAAATACTTCGATCTGAGCTCACTTCCGGCACACTaGATCAGGACCTGGGACATG +
Preference number: 4 (lower is better)
Translates to: RGRAVKNTSILVKYFDLSSLPAH*IRTWDM
Trigger: CATGTCCCAGGTCCTGATTCAGTGTGCCGGAAGTGA...GCTCAGATCGAAGTATTTCACAAGAATACTTGTGTTTTTAACAGCCCTTCCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp ACAATTCACTACTGCACGAAGAGGGCCAAAGATCTGCAGAGAAATGTGAAGCAAGGTTTCCCACAGACGTaGCCTTCGTTTGCTTCTGTA +
Preference number: 4 (lower is better)
Translates to: TIHYCTKRAKDLQRNVKQGFPQT*PSFASV
Trigger: TACAGAAGCAAACGAAGGTCACGTCTGTGGGAAACC...TTGCTTCACATTTCTCTGCAGATCTTTGGCCCTCTTCGTGCAGTAGTGAATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544132.2
CDS-3UTR TCA 90 bp GTGTATTTTGTTGTTACTGAACTAGCCTATACAGAACCGTCTGTGTCCTCCCAACGCGAACTCCTCATCTaGAGGCTTCCGTTCAGGTTT +
Preference number: 4 (lower is better)
Translates to: VYFVVTELAYTEPSVSSQRELLI*RLPFRF
Trigger: AAACCTGAACGGAAGCCTTCAGATGAGGAGTTCGCG...TTGGGAGGACACAGACGGTTCTGTATAGGCTAGTTCAGTAACAACAAAATACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp GTGGGGAAGAAAGAAATCACGGCCACCTGGAATTACAGCCACCCTGAAGAAGGAATGACTTTCAGAATCTaGGCATCTTCTTCCAAAGCA +
Preference number: 4 (lower is better)
Translates to: VGKKEITATWNYSHPEEGMTFRI*ASSSKA
Trigger: TGCTTTGGAAGAAGATGCTCAGATTCTGAAAGTCAT...TCCTTCTTCAGGGTGGCTGTAATTCCAGGTGGCCGTGATTTCTTTCTTCCCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp TCCCAGAGAAGTGAAGAAATGATTGGCATTAAGGAGTCCACACAACCAGGGCAGTCATCAGTCATGGTTTaGTCGTCTCCATTCGCAGAA +
Preference number: 4 (lower is better)
Translates to: SQRSEEMIGIKESTQPGQSSVMV*SSPFAE
Trigger: TTCTGCGAATGGAGACGATCAAACCATGACTGATGA...CTGCCCTGGTTGTGTGGACTCCTTAATGCCAATCATTTCTTCACTTCTCTGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp CTTCTTATTCACGTAGCTGGAAAGGACATTCTAGCATGGGGATTAGCCCGGACATGGGAGGTCACACGGTaGAACAGACACAGTTATATA +
Preference number: 4 (lower is better)
Translates to: LLIHVAGKDILAWGLARTWEVTR*NRHSYI
Trigger: TATATAACTGTGTCTGTTTCACCGTGTGACCTCCCA...TGTCCGGGCTAATCCCCATGCTAGAATGTCCTTTCCAGCTACGTGAATAAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp CCATTAGCTTGTTCCATGCTGAATGAAGCCACCCAACTTTCTAAACAACGTGCTCTCCCAGGACAAGACTaGTACTGCATCAGAGTTCAC +
Preference number: 4 (lower is better)
Translates to: PLACSMLNEATQLSKQRALPGQD*YCIRVH
Trigger: GTGAACTCTGATGCAGTATCAGTCTTGTCCTGGGAG...AGCACGTTGTTTAGAAAGTTGGGTGGCTTCATTCAGCATGGAACAAGCTAATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp TGTAAAACTCCCCTAAATCAGTCTTCTAGGGCCACACGGAGCAGAAGCAGCTTCTTAATGCCTTCAACATaGGTCTGGCCCTTTTCATCA +
Preference number: 4 (lower is better)
Translates to: CKTPLNQSSRATRSRSSFLMPST*VWPFSS
Trigger: TGATGAAAAGGGCCAGACTCATGTTGAAGGCATTAA...GAAGCTGCTTCTGCTCCGTGTGGCCCTAGAAGACTGATTTAGGGGAGTTTTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000544132.2
CDS-3UTR GCA 90 bp TTAAGCCTCCACAAAGTACAATGGGAAATATCAGGAACACTCTCAAAAGTTGTTGGAACTCGCGGATGTTaGTCAGGCACTCGCTCTCGC +
Preference number: 4 (lower is better)
Translates to: LSLHKVQWEISGTLSKVVGTRGC*SGTRSR
Trigger: GCGAGAGCGAGTGCCTGAGCAACATCCGCGAGTTCC...AACAACTTTTGAGAGTGTTCCTGATATTTCCCATTGTACTTTGTGGAGGCTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317133.9
ENST00000375741.6
CDS-3UTR GCA 90 bp ATAGTCAGTCATTCGAATGTATACTCGCATCGGCAGTTAAGCCTCCACAAAGTAAGTCAAAAGACTTTATaGGGTGAGACGAGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: IVSHSNVYSHRQLSLHKVSQKTL*GETRAG
Trigger: CCCGGCCCTCGTCTCACCGCATAAAGTCTTTTGACT...TACTTTGTGGAGGCTTAACTGCCGATGCGAGTATACATTCGAATGACTGACTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp AGAACACAGCCGTTGGAACTGGGCTCACAGCACCTTTGCTGCATATATTCTTCTTTTGAAGTCCGAGTGTaGAAAGACTGTGATCCAAGG +
Preference number: 4 (lower is better)
Translates to: RTQPLELGSQHLCCIYSSFEVRV*KDCDPR
Trigger: CCTTGGATCACAGTCTTTGCACACTCGGACTTCAAA...AGAAGAATATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp TCAGGTCCTCAGAGTCAATCCCTCCTGTCTGGATTCATCAGTCATGGTTTGATCTTTGAAGTCCGAGTGTaGAAAGACTGTGATCCAAGG +
Preference number: 4 (lower is better)
Translates to: SGPQSQSLLSGFISHGLIFEVRV*KDCDPR
Trigger: CCTTGGATCACAGTCTTTGCACACTCGGACTTCAAA...GATCAAACCATGACTGATGAATCCAGACAGGAGGGATTGACTCTGAGGACCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp AGAACCGTAAACAGCAACACAACACTCTCCCAAGGTGCCCAGCTCAAAGGCATCCTACCAGTTGATTGTTaGTATTATCGGTCATGTCCA +
Preference number: 4 (lower is better)
Translates to: RTVNSNTTLSQGAQLKGILPVDC*YYRSCP
Trigger: TGGACATGACCGATAATAGCAACAATCAACTGGTAG...GATGCCTTTGAGCTGGGCACCTTGGGAGAGTGTTGTGTTGCTGTTTACGGTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp CATCTGAGAATCACAGTACTCAGACAGCGGACAAGAGCAAACACCTCTAGGTGGTCGTCCTCATTGGTCTaGTGGAAGTTAAACTTTGCT +
Preference number: 4 (lower is better)
Translates to: HLRITVLRQRTRANTSRWSSSLV*WKLNFA
Trigger: AGCAAAGTTTAACTTCCAGCAGACCAATGAGGACGA...CCACCTAGAGGTGTTTGCTCTTGTCCGCTGTCTGAGTACTGTGATTCTCAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp TTTGTTGTTACTGAACTAGCCTATACAGAACCGTCTGTGTCCTCCCAAAACGCACGTGAGGACATTCACTaGAGAAGGGTGATTGGCACA +
Preference number: 4 (lower is better)
Translates to: FVVTELAYTEPSVSSQNAREDIH*RRVIGT
Trigger: TGTGCCAATCACCCTTCTGCAGTGAATGTCCTCACG...TGCGTTTTGGGAGGACACAGACGGTTCTGTATAGGCTAGTTCAGTAACAACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp CCATTAGCTTGTTCCATGCTGAATGAAGCCACCCAACTTTCTAAACAACGTGCTCGTGAGGACATTCACTaGAGAAGGGTGATTGGCACA +
Preference number: 4 (lower is better)
Translates to: PLACSMLNEATQLSKQRAREDIH*RRVIGT
Trigger: TGTGCCAATCACCCTTCTGCAGTGAATGTCCTCACG...AGCACGTTGTTTAGAAAGTTGGGTGGCTTCATTCAGCATGGAACAAGCTAATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp ACATCTAAGAAAAGCAGGCTGCGATACAACAAGCATTTGTTAAGAAAAGCTCAGCGAGAATCCCAGGGCTaGTGGCACCTTTGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: TSKKSRLRYNKHLLRKAQRESQG*WHLWSP
Trigger: TGGAGACCAAAGGTGCCAGCAGCCCTGGGATTCTCG...CTGAGCTTTTCTTAACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
ENST00000478679.5
CDS-3UTR GCA 90 bp TTAAGCCTCCACAAAGTACAATGGGAAATATCAGGAACACTCTCAAAAGTTGTTGGCTTGCTGTCTGCGTaGTTGCTGGACGGAGTGACC +
Preference number: 4 (lower is better)
Translates to: LSLHKVQWEISGTLSKVVGLLSA*LLDGVT
Trigger: GGTCACTCCGTCCAGCAAGCACGCAGACAGCAAGCC...AACAACTTTTGAGAGTGTTCCTGATATTTCCCATTGTACTTTGTGGAGGCTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp TATCAAGTTCCCACCCCCTTGGGAGGTCACACGGTGAAACAGACACAGTTATATGTTGAATTGAGTGTTTaGCTTGTTTTGGCGCTGGTG +
Preference number: 4 (lower is better)
Translates to: YQVPTPLGGHTVKQTQLYVELSV*LVLALV
Trigger: CACCAGCGCCAAAACAAGGCAAACACTCAATTCAAC...ATATAACTGTGTCTGTTTCACCGTGTGACCTCCCAAGGGGGTGGGAACTTGATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000218789.9
CDS-3UTR GCA 90 bp CCTGCTACAACAGCAAACTCCAATAAACTCAAGTTGAATGGTTTCCCACTGCAAAACACTCTCCCAAGGTaGCCAGCTCAAAGGCATCAG +
Preference number: 4 (lower is better)
Translates to: PATTANSNKLKLNGFPLQNTLPR*PAQRHQ
Trigger: CTGATGCCTTTGAGCTGGGCACCTTGGGAGAGTGTT...TTGCAGTGGGAAACCATTCAACTTGAGTTTATTGGAGTTTGCTGTTGTAGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp CGATTACCAGAACACAGCCGTTGGAACTGGGCTCACAGCACCTTTGCTGCATATTCACAGCACCTTTGCTaGATATATTCTTCTCATCTC +
Preference number: 4 (lower is better)
Translates to: RLPEHSRWNWAHSTFAAYSQHLC*IYSSHL
Trigger: GAGATGAGAAGAATATATGCAGCAAAGGTGCTGTGA...ATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp CCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAACTGGGCTCACTTTATACTATGGGGTTaGTGTAAATGGAGTTTCACT +
Preference number: 4 (lower is better)
Translates to: PTCCSARLPEHSRWNWAHFILWG*CKWSFT
Trigger: AGTGAAACTCCATTTACAGCAACCCCATAGTATAAA...GTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp AAAGTAGAAACAATGGCCCTCTGGATGCCACATCGCCACTGCCACAGGAGAACTGTCAGGTTATTCTTCTaGAGTGATCTTAGCATCAAG +
Preference number: 4 (lower is better)
Translates to: KVETMALWMPHRHCHRRTVRLFF*SDLSIK
Trigger: CTTGATGCTAAGATCACTGCAGAAGAATAACCTGAC...AGTTCTCCTGTGGCAGTGGCGATGTGGCATCCAGAGGGCCATTGTTTCTACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp AGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAAAAACAAACACTTCATTaGCATATGCAACCACAAACA +
Preference number: 4 (lower is better)
Translates to: RPRAHMLFCTITRTQPLEKQTLH*HMQPQT
Trigger: TGTTTGTGGTTGCATATGGCAATGAAGTGTTTGTTT...TTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp TCAGGTCCTCAGAGTCAATCCCTCCTGTCTGGATTCATCAGTCATGGTTTGATCCTTGAATTGAGTGTTTaGCTTGTTTTGGCGCTGGTG +
Preference number: 4 (lower is better)
Translates to: SGPQSQSLLSGFISHGLILELSV*LVLALV
Trigger: CACCAGCGCCAAAACAAGGCAAACACTCAATTCAAG...GATCAAACCATGACTGATGAATCCAGACAGGAGGGATTGACTCTGAGGACCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp AGCACCTCTGAACTGTGCGTGAGGAGGCACAATTCAGGGTTGTTTCTCGAGAACAAAACAATTCACTACTaGACGAAGAGGGCCAAAGAT +
Preference number: 4 (lower is better)
Translates to: STSELCVRRHNSGLFLENKTIHY*TKRAKD
Trigger: ATCTTTGGCCCTCTTCGTGCAGTAGTGAATTGTTTT...GTTCTCGAGAAACAACCCTGAATTGTGCCTCCTCACGCACAGTTCAGAGGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544132.2
CDS-3UTR CCA 90 bp TCCCAGAGAAGTGAAGAAATGATTGGCATTAAGGAGTCCACACAACCAGGGCAGTCCAAACTCCGATACTaGCCCTGGAACAGTTTTGAA +
Preference number: 4 (lower is better)
Translates to: SQRSEEMIGIKESTQPGQSKLRY*PWNSFE
Trigger: TTCAAAACTGTTCCAGGGCCAGTATCGGAGTTTGGA...CTGCCCTGGTTGTGTGGACTCCTTAATGCCAATCATTTCTTCACTTCTCTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp AGGGTGATTGGCACAATACGTGAGGTACAGGGTTTTCATCTGTGGCATCAGGTTTCGTATCAAATCCTTTaGGAGGGCTCTTCAGTGTTC +
Preference number: 4 (lower is better)
Translates to: RVIGTIREVQGFHLWHQVSYQIL*EGSSVF
Trigger: GAACACTGAAGAGCCCTCCCAAAGGATTTGATACGA...AACCTGATGCCACAGATGAAAACCCTGTACCTCACGTATTGTGCCAATCACCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR CCA 90 bp CCTCTACTACAGTCCAGTAGTCTACACTTGCAGAGGCTGAATGCTTCAGCTTTCAACTTAACTTCTCACTaGTCTGCAATGGCCGTAGGT +
Preference number: 4 (lower is better)
Translates to: PLLQSSSLHLQRLNASAFNLTSH*SAMAVG
Trigger: ACCTACGGCCATTGCAGACCAGTGAGAAGTTAAGTT...GAAAGCTGAAGCATTCAGCCTCTGCAAGTGTAGACTACTGGACTGTAGTAGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp AGAACACAGCCGTTGGAACTGGGCTCACAGCACCTTTGCTGCATATATTCTTCTAACTTAACTTCTCACTaGTCTGCAATGGCCGTAGGT +
Preference number: 4 (lower is better)
Translates to: RTQPLELGSQHLCCIYSSNLTSH*SAMAVG
Trigger: ACCTACGGCCATTGCAGACCAGTGAGAAGTTAAGTT...AGAAGAATATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp ACATCTAAGAAAAGCAGGCTGCGATACAACAAGCATTTGTTAAGAAAAGCTCAGGTTTGCTCAGGCCCGTaGTCAGCACGAGAATCCCAG +
Preference number: 4 (lower is better)
Translates to: TSKKSRLRYNKHLLRKAQVCSGP*SARESQ
Trigger: CTGGGATTCTCGTGCTGACCACGGGCCTGAGCAAAC...CTGAGCTTTTCTTAACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
ENST00000478679.5
CDS-3UTR CCA 90 bp TTGATGCTACAACTGAATGCAACAGGTCACATTCAGTGCTTTTTGAAGCAGAAACCTCCCAGTTCCGGATaGCTTCCGTCAGGATCTGCA +
Preference number: 4 (lower is better)
Translates to: LMLQLNATGHIQCFLKQKPPSSG*LPSGSA
Trigger: TGCAGATCCTGACGGAAGCCATCCGGAACTGGGAGG...TTTCTGCTTCAAAAAGCACTGAATGTGACCTGTTGCATTCAGTTGTAGCATCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp ACATCTAAGAAAAGCAGGCTGCGATACAACAAGCATTTGTTAAGAAAAGCTCAGCCTCCCAGTTCCGGATaGCTTCCGTCAGGATCTGCA +
Preference number: 4 (lower is better)
Translates to: TSKKSRLRYNKHLLRKAQPPSSG*LPSGSA
Trigger: TGCAGATCCTGACGGAAGCCATCCGGAACTGGGAGG...CTGAGCTTTTCTTAACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
ENST00000478679.5
CDS-3UTR CCA 90 bp CCATTAGCTTGTTCCATGCTGAATGAAGCCACCCAACTTTCTAAACAACGTGCTCTGAATGAGGCTTTATaGTGGGGTTTCCCACAGACG +
Preference number: 4 (lower is better)
Translates to: PLACSMLNEATQLSKQRALNEAL*WGFPQT
Trigger: CGTCTGTGGGAAACCCCACCATAAAGCCTCATTCAG...AGCACGTTGTTTAGAAAGTTGGGTGGCTTCATTCAGCATGGAACAAGCTAATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp ACATCTAAGAAAAGCAGGCTGCGATACAACAAGCATTTGTTAAGAAAAGCTCAGTCAGGCTCCAGGGCTTaGGTGTTTTCGGAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: TSKKSRLRYNKHLLRKAQSGSRA*VFSEAP
Trigger: TGGAGCCTCCGAAAACACCCAAGCCCTGGAGCCTGA...CTGAGCTTTTCTTAACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
ENST00000478679.5
CDS-3UTR CCA 90 bp CCATTAGCTTGTTCCATGCTGAATGAAGCCACCCAACTTTCTAAACAACGTGCTGTTCAGGTTTGCGCTTaGGCAGCAGCTTTTTCATGG +
Preference number: 4 (lower is better)
Translates to: PLACSMLNEATQLSKQRAVQVCA*AAAFSW
Trigger: CCATGAAAAAGCTGCTGCCCAAGCGCAAACCTGAAC...AGCACGTTGTTTAGAAAGTTGGGTGGCTTCATTCAGCATGGAACAAGCTAATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp TCAGGTCCTCAGAGTCAATCCCTCCTGTCTGGATTCATCAGTCATGGTTTGATCACATCCCTTATAGATTaGTCTCATCCCAGGCAGGAT +
Preference number: 4 (lower is better)
Translates to: SGPQSQSLLSGFISHGLITSLID*SHPRQD
Trigger: ATCCTGCCTGGGATGAGACCAATCTATAAGGGATGT...GATCAAACCATGACTGATGAATCCAGACAGGAGGGATTGACTCTGAGGACCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp GTGTATTTTGTTGTTACTGAACTAGCCTATACAGAACCGTCTGTGTCCTCCCAATTAGAAATACCGACATaGGGGGTGCTGCCACAGCAC +
Preference number: 4 (lower is better)
Translates to: VYFVVTELAYTEPSVSSQLEIPT*GVLPQH
Trigger: GTGCTGTGGCAGCACCCCCCATGTCGGTATTTCTAA...TTGGGAGGACACAGACGGTTCTGTATAGGCTAGTTCAGTAACAACAAAATACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp AAAGGAAACCAAAAGCAAAGTCCCTGTGGTCACCCTTATTTATTGCTGAAGCAGTTAGAAATACCGACATaGGGGGTGCTGCCACAGCAC +
Preference number: 4 (lower is better)
Translates to: KGNQKQSPCGHPYLLLKQLEIPT*GVLPQH
Trigger: GTGCTGTGGCAGCACCCCCCATGTCGGTATTTCTAA...CTGCTTCAGCAATAAATAAGGGTGACCACAGGGACTTTGCTTTTGGTTTCCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp AGAACCGTAAACAGCAACACAACACTCTCCCAAGGTGCCCAGCTCAAAGGCATCCTACAGGATAAGAAATaGCTTCATCTCCTCATCCAT +
Preference number: 4 (lower is better)
Translates to: RTVNSNTTLSQGAQLKGILQDKK*LHLLIH
Trigger: ATGGATGAGGAGATGAAGCCATTTCTTATCCTGTAG...GATGCCTTTGAGCTGGGCACCTTGGGAGAGTGTTGTGTTGCTGTTTACGGTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp TTAAGCCTCCACAAAGTACAATGGGAAATATCAGGAACACTCTCAAAAGTTGTTGTCAAGGAAACGGCGTaGCCTGAAGTGGGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: LSLHKVQWEISGTLSKVVVKETA*PEVGLC
Trigger: GCACAGCCCCACTTCAGGCCACGCCGTTTCCTTGAC...AACAACTTTTGAGAGTGTTCCTGATATTTCCCATTGTACTTTGTGGAGGCTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317133.9
CDS-3UTR CCA 90 bp TTAAGCCTCCACAAAGTACAATGGGAAATATCAGGAACACTCTCAAAAGTTGTTGGTAGACTTTCTCGATaGTCCCGGGGAGCAGGCGCT +
Preference number: 4 (lower is better)
Translates to: LSLHKVQWEISGTLSKVVGRLSR*SRGAGA
Trigger: AGCGCCTGCTCCCCGGGACCATCGAGAAAGTCTACC...AACAACTTTTGAGAGTGTTCCTGATATTTCCCATTGTACTTTGTGGAGGCTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317133.9
ENST00000375741.6
CDS-3UTR CCA 90 bp CCTCTACTACAGTCCAGTAGTCTACACTTGCAGAGGCTGAATGCTTCAGCTTTCTCTCCTCCATGGTTCTaGCACTTAGATCACAAACCT +
Preference number: 4 (lower is better)
Translates to: PLLQSSSLHLQRLNASAFSPPWF*HLDHKP
Trigger: AGGTTTGTGATCTAAGTGCCAGAACCATGGAGGAGA...GAAAGCTGAAGCATTCAGCCTCTGCAAGTGTAGACTACTGGACTGTAGTAGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp TTGATGCTACAACTGAATGCAACAGGTCACATTCAGTGCTTTTTGAAGCAGAAACCAGAACACAGCCGTTaGAACTGGGCTCACAGCACC +
Preference number: 4 (lower is better)
Translates to: LMLQLNATGHIQCFLKQKPEHSR*NWAHST
Trigger: GGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCTGG...TTTCTGCTTCAAAAAGCACTGAATGTGACCTGTTGCATTCAGTTGTAGCATCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp GAAATTGGTCTGAGTGAGGCCAGTGAAAACTCCTTACAACAAATCCCAGGAAAACACAGAGCCGTGAGGTaGAGACAAGCTCTGAACACA +
Preference number: 4 (lower is better)
Translates to: EIGLSEASENSLQQIPGKHRAVR*RQALNT
Trigger: TGTGTTCAGAGCTTGTCTCCACCTCACGGCTCTGTG...TTTTCCTGGGATTTGTTGTAAGGAGTTTTCACTGGCCTCACTCAGACCAATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp ACATCTAAGAAAAGCAGGCTGCGATACAACAAGCATTTGTTAAGAAAAGCTCAGTATGGATGTCAGGGGTaGGGAGCCGGGGGAACTGAA +
Preference number: 4 (lower is better)
Translates to: TSKKSRLRYNKHLLRKAQYGCQG*GAGGTE
Trigger: TTCAGTTCCCCCGGCTCCCCACCCCTGACATCCATA...CTGAGCTTTTCTTAACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAGATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp TTGATGCTACAACTGAATGCAACAGGTCACATTCAGTGCTTTTTGAAGCAGAAATATGGATGTCAGGGGTaGGGAGCCGGGGGAACTGAA +
Preference number: 4 (lower is better)
Translates to: LMLQLNATGHIQCFLKQKYGCQG*GAGGTE
Trigger: TTCAGTTCCCCCGGCTCCCCACCCCTGACATCCATA...TTTCTGCTTCAAAAAGCACTGAATGTGACCTGTTGCATTCAGTTGTAGCATCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp GTGGGGAAGAAAGAAATCACGGCCACCTGGAATTACAGCCACCCTGAAGAAGGATACAAAATCTTCCAATaGTGTGAGCAGTTCAGTAGC +
Preference number: 4 (lower is better)
Translates to: VGKKEITATWNYSHPEEGYKIFQ*CEQFSS
Trigger: GCTACTGAACTGCTCACACCATTGGAAGATTTTGTA...TCCTTCTTCAGGGTGGCTGTAATTCCAGGTGGCCGTGATTTCTTTCTTCCCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp TCAGGTCCTCAGAGTCAATCCCTCCTGTCTGGATTCATCAGTCATGGTTTGATCGCTCTTACTACCAGTTaGTTGTTGCTATTATCGGTC +
Preference number: 4 (lower is better)
Translates to: SGPQSQSLLSGFISHGLIALTTS*LLLLSV
Trigger: GACCGATAATAGCAACAATCAACTGGTAGTAAGAGC...GATCAAACCATGACTGATGAATCCAGACAGGAGGGATTGACTCTGAGGACCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp GTGTATTTTGTTGTTACTGAACTAGCCTATACAGAACCGTCTGTGTCCTCCCAAGATGACGTCTCCTTTTaGGAAGGAAAGCTCGTCCTC +
Preference number: 4 (lower is better)
Translates to: VYFVVTELAYTEPSVSSQDDVSF*EGKLVL
Trigger: GAGGACGAGCTTTCCTTCTCAAAAGGAGACGTCATC...TTGGGAGGACACAGACGGTTCTGTATAGGCTAGTTCAGTAACAACAAAATACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp AAAGGAAACCAAAAGCAAAGTCCCTGTGGTCACCCTTATTTATTGCTGAAGCAGTTCACTGCAGAAGGGTaGTTGGCACAATACGTGAGG +
Preference number: 4 (lower is better)
Translates to: KGNQKQSPCGHPYLLLKQFTAEG*LAQYVR
Trigger: CCTCACGTATTGTGCCAATCACCCTTCTGCAGTGAA...CTGCTTCAGCAATAAATAAGGGTGACCACAGGGACTTTGCTTTTGGTTTCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp ACATCTAAGAAAAGCAGGCTGCGATACAACAAGCATTTGTTAAGAAAAGCTCAGCACCTTTGGTCTCCATaGACTCCCCCAACTCCTCAC +
Preference number: 4 (lower is better)
Translates to: TSKKSRLRYNKHLLRKAQHLWSP*TPPTPH
Trigger: GTGAGGAGTTGGGGGAGTTCATGGAGACCAAAGGTG...CTGAGCTTTTCTTAACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAGATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
ENST00000478679.5
CDS-3UTR TCA 90 bp CAAAGGAGTAACCCTCGGGCAAATCGTGGCCCCTTTAAACGTTTATATCAAGTTCTCTTCCGGACTTCTTaGCATTGGGCTGAAAGGTTT +
Preference number: 4 (lower is better)
Translates to: QRSNPRANRGPFKRLYQVLFRTS*HWAERF
Trigger: AAACCTTTCAGCCCAATGTCAAGAAGTCCGGAAGAG...AACTTGATATAAACGTTTAAAGGGGCCACGATTTGCCCGAGGGTTACTCCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp CCATTAGCTTGTTCCATGCTGAATGAAGCCACCCAACTTTCTAAACAACGTGCTCTCTTCCGGACTTCTTaGCATTGGGCTGAAAGGTTT +
Preference number: 4 (lower is better)
Translates to: PLACSMLNEATQLSKQRALFRTS*HWAERF
Trigger: AAACCTTTCAGCCCAATGTCAAGAAGTCCGGAAGAG...AGCACGTTGTTTAGAAAGTTGGGTGGCTTCATTCAGCATGGAACAAGCTAATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp ACATCTAAGAAAAGCAGGCTGCGATACAACAAGCATTTGTTAAGAAAAGCTCAGTCACTTCCGGCACACTaGATCAGGACCTGGGACATG +
Preference number: 4 (lower is better)
Translates to: TSKKSRLRYNKHLLRKAQSLPAH*IRTWDM
Trigger: CATGTCCCAGGTCCTGATTCAGTGTGCCGGAAGTGA...CTGAGCTTTTCTTAACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
ENST00000478679.5
CDS-3UTR TCA 90 bp ATCTACAGGATAAGAAATGGCTTCATCTCCTCATCCATACAAGGTGAGAGCAAACGCGAACTCCTCATCTaGAGGCTTCCGTTCAGGTTT +
Preference number: 4 (lower is better)
Translates to: IYRIRNGFISSSIQGESKRELLI*RLPFRF
Trigger: AAACCTGAACGGAAGCCTTCAGATGAGGAGTTCGCG...TTTGCTCTCACCTTGTATGGATGAGGAGATGAAGCCATTTCTTATCCTGTAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp CCATTAGCTTGTTCCATGCTGAATGAAGCCACCCAACTTTCTAAACAACGTGCTTCATCAGCCAAGACGTaGTTATGCATCAGGTCAGTG +
Preference number: 4 (lower is better)
Translates to: PLACSMLNEATQLSKQRASSAKT*LCIRSV
Trigger: CACTGACCTGATGCATAATCACGTCTTGGCTGATGA...AGCACGTTGTTTAGAAAGTTGGGTGGCTTCATTCAGCATGGAACAAGCTAATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp AAAGGAAACCAAAAGCAAAGTCCCTGTGGTCACCCTTATTTATTGCTGAAGCAGGTTCACAGAGTGGATTaGTGTAGCTCAGGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: KGNQKQSPCGHPYLLLKQVHRVD*CSSGPQ
Trigger: CTGAGGACCTGAGCTACATCAATCCACTCTGTGAAC...CTGCTTCAGCAATAAATAAGGGTGACCACAGGGACTTTGCTTTTGGTTTCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp CATCTGAGAATCACAGTACTCAGACAGCGGACAAGAGCAAACACCTCTAGGTGGCTTTTAGTCAGTCACTaGACTTATTGCAGAATGAGG +
Preference number: 4 (lower is better)
Translates to: HLRITVLRQRTRANTSRWLLVSH*TYCRMR
Trigger: CCTCATTCTGCAATAAGTTCAGTGACTGACTAAAAG...CCACCTAGAGGTGTTTGCTCTTGTCCGCTGTCTGAGTACTGTGATTCTCAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp TCCCAGAGAAGTGAAGAAATGATTGGCATTAAGGAGTCCACACAACCAGGGCAGAAATCTGATGCGCAATaGGTTGTTCTGAGACCAGTA +
Preference number: 4 (lower is better)
Translates to: SQRSEEMIGIKESTQPGQKSDAQ*VVLRPV
Trigger: TACTGGTCTCAGAACAACTCATTGCGCATCAGATTT...CTGCCCTGGTTGTGTGGACTCCTTAATGCCAATCATTTCTTCACTTCTCTGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp TCAGGTCCTCAGAGTCAATCCCTCCTGTCTGGATTCATCAGTCATGGTTTGATCAAATCTGATGCGCAATaGGTTGTTCTGAGACCAGTA +
Preference number: 4 (lower is better)
Translates to: SGPQSQSLLSGFISHGLIKSDAQ*VVLRPV
Trigger: TACTGGTCTCAGAACAACTCATTGCGCATCAGATTT...GATCAAACCATGACTGATGAATCCAGACAGGAGGGATTGACTCTGAGGACCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp CTTCTTATTCACGTAGCTGGAAAGGACATTCTAGCATGGGGATTAGCCCGGACATCAGAGAGTCAAATCTaGTGCGCAATGAGTTGTTCT +
Preference number: 4 (lower is better)
Translates to: LLIHVAGKDILAWGLARTSESQI*CAMSCS
Trigger: AGAACAACTCATTGCGCATCAGATTTGACTCTCTGA...TGTCCGGGCTAATCCCCATGCTAGAATGTCCTTTCCAGCTACGTGAATAAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp GTGTATTTTGTTGTTACTGAACTAGCCTATACAGAACCGTCTGTGTCCTCCCAAGCCCGCATGAGTGAATaGTCTGCTAAGTTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: VYFVVTELAYTEPSVSSQARMSE*SAKLRK
Trigger: CTTCCTCAACTTAGCAGATCATTCACTCATGCGGGC...TTGGGAGGACACAGACGGTTCTGTATAGGCTAGTTCAGTAACAACAAAATACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp CAAAGGAGTAACCCTCGGGCAAATCGTGGCCCCTTTAAACGTTTATATCAAGTTTTGCTTGTGCCCGCATaGGTGAATGATCTGCTAAGT +
Preference number: 4 (lower is better)
Translates to: QRSNPRANRGPFKRLYQVLLVPA*VNDLLS
Trigger: ACTTAGCAGATCATTCACTCATGCGGGCACAAGCAA...AACTTGATATAAACGTTTAAAGGGGCCACGATTTGCCCGAGGGTTACTCCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp CAAAGGAGTAACCCTCGGGCAAATCGTGGCCCCTTTAAACGTTTATATCAAGTTCTCATCCATACAAGGTaGGAGCAAAGGAGTAACCCT +
Preference number: 4 (lower is better)
Translates to: QRSNPRANRGPFKRLYQVLIHTR*EQRSNP
Trigger: AGGGTTACTCCTTTGCTCTCACCTTGTATGGATGAG...AACTTGATATAAACGTTTAAAGGGGCCACGATTTGCCCGAGGGTTACTCCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp CCTCTACTACAGTCCAGTAGTCTACACTTGCAGAGGCTGAATGCTTCAGCTTTCCTCTCCACAACTACTTaGTCAGTGTTCATAGCACTT +
Preference number: 4 (lower is better)
Translates to: PLLQSSSLHLQRLNASAFLSTTT*SVFIAL
Trigger: AAGTGCTATGAACACTGATCAAGTAGTTGTGGAGAG...GAAAGCTGAAGCATTCAGCCTCTGCAAGTGTAGACTACTGGACTGTAGTAGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp GCTTGTTCCATGCTGAATGAAGCCACCCAACTTTCTAAACAACGTGCTACTGCCCTCTCCACAACTACTTaGTCAGTGTTCATAGCACTT +
Preference number: 4 (lower is better)
Translates to: ACSMLNEATQLSKQRATALSTTT*SVFIAL
Trigger: AAGTGCTATGAACACTGATCAAGTAGTTGTGGAGAG...GGCAGTAGCACGTTGTTTAGAAAGTTGGGTGGCTTCATTCAGCATGGAACAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp CGATTACCAGAACACAGCCGTTGGAACTGGGCTCACAGCACCTTTGCTGCATATTATTATCAGCATGACTaGAGTCCCACAAAAGTAGAA +
Preference number: 4 (lower is better)
Translates to: RLPEHSRWNWAHSTFAAYYYQHD*SPTKVE
Trigger: TTCTACTTTTGTGGGACTTCAGTCATGCTGATAATA...ATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp AAACAATGGCCCTCTGGATGCCACATCGCCACTGCCACAGGAGAACTGTCTTTTATTCTATTATCAGCATaGCTGAAGTCCCACAAAAGT +
Preference number: 4 (lower is better)
Translates to: KQWPSGCHIATATGELSFILLSA*LKSHKS
Trigger: ACTTTTGTGGGACTTCAGTCATGCTGATAATAGAAT...AAAAGACAGTTCTCCTGTGGCAGTGGCGATGTGGCATCCAGAGGGCCATTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp CCATTAGCTTGTTCCATGCTGAATGAAGCCACCCAACTTTCTAAACAACGTGCTTTTGCAAAGGCCTGGTaGTGGCTTAAACCTACCTTC +
Preference number: 4 (lower is better)
Translates to: PLACSMLNEATQLSKQRAFAKAW*WLKPTF
Trigger: GAAGGTAGGTTTAAGCCATCACCAGGCCTTTGCAAA...AGCACGTTGTTTAGAAAGTTGGGTGGCTTCATTCAGCATGGAACAAGCTAATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp TCCCAGAGAAGTGAAGAAATGATTGGCATTAAGGAGTCCACACAACCAGGGCAGTGCGTGAACTTGAATTaGGTGTTTGCCTTGTTTTGG +
Preference number: 4 (lower is better)
Translates to: SQRSEEMIGIKESTQPGQCVNLN*VFALFW
Trigger: CCAAAACAAGGCAAACACTCAATTCAAGTTCACGCA...CTGCCCTGGTTGTGTGGACTCCTTAATGCCAATCATTTCTTCACTTCTCTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp TGCAGAAGGGTGATTGGCACAATACGTGAGGTACAGGGTTTTCATCTGTGGCATCTGATACAAATCATTTaGATCAAACGTCTCCAGCCG +
Preference number: 4 (lower is better)
Translates to: CRRVIGTIREVQGFHLWHLIQII*IKRLQP
Trigger: CGGCTGGAGACGTTTGATGCAAATGATTTGTATCAG...ATGCCACAGATGAAAACCCTGTACCTCACGTATTGTGCCAATCACCCTTCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR GCA 90 bp GGATTTGATGCTACAACTGAATGCAACAGGTCACATTCAGTGCTTTTTGAAGCAAGTCAAAAGACTTTATaGGGTGAGACGAGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: GFDATTECNRSHSVLFEASQKTL*GETRAG
Trigger: CCCGGCCCTCGTCTCACCGCATAAAGTCTTTTGACT...TGCTTCAAAAAGCACTGAATGTGACCTGTTGCATTCAGTTGTAGCATCAAATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp CCTCTACTACAGTCCAGTAGTCTACACTTGCAGAGGCTGAATGCTTCAGCTTTCCTTCGGGCAACTTGGTaGATTCTTCTAAAGACTGTA +
Preference number: 4 (lower is better)
Translates to: PLLQSSSLHLQRLNASAFLRATW*ILLKTV
Trigger: TACAGTCTTTAGAAGAATGCACCAAGTTGCCCGAAG...GAAAGCTGAAGCATTCAGCCTCTGCAAGTGTAGACTACTGGACTGTAGTAGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp ATAGTCAGTCATTCGAATGTATACTCGCATCGGCAGTTAAGCCTCCACAAAGTACGTGAGGACATTCACTaGAGAAGGGTGATTGGCACA +
Preference number: 4 (lower is better)
Translates to: IVSHSNVYSHRQLSLHKVREDIH*RRVIGT
Trigger: TGTGCCAATCACCCTTCTGCAGTGAATGTCCTCACG...TACTTTGTGGAGGCTTAACTGCCGATGCGAGTATACATTCGAATGACTGACTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp GGATTTGATGCTACAACTGAATGCAACAGGTCACATTCAGTGCTTTTTGAAGCAGCTTCCGTCAGGATCTaGAGCTCAAGCTCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: GFDATTECNRSHSVLFEAASVRI*SSSSFL
Trigger: GAGGAAAGAGCTTGAGCTGCAGATCCTGACGGAAGC...TGCTTCAAAAAGCACTGAATGTGACCTGTTGCATTCAGTTGTAGCATCAAATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp CCTCTGCACTGGAACACAGTGGGGGAAACGTTCCCTGCTTATGCCTATGTTACTATATCCGCTCAATCATaGTCCCTGATATTTCAAATG +
Preference number: 4 (lower is better)
Translates to: PLHWNTVGETFPAYAYVTISAQS*SLIFQM
Trigger: CATTTGAAATATCAGGGAGCATGATTGAGCGGATAT...AGTAACATAGGCATAAGCAGGGAACGTTTCCCCCACTGTGTTCCAGTGCAGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp CGATTACCAGAACACAGCCGTTGGAACTGGGCTCACAGCACCTTTGCTGCATATATATCCGCTCAATCATaGTCCCTGATATTTCAAATG +
Preference number: 4 (lower is better)
Translates to: RLPEHSRWNWAHSTFAAYISAQS*SLIFQM
Trigger: CATTTGAAATATCAGGGAGCATGATTGAGCGGATAT...ATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp AAACAATGGCCCTCTGGATGCCACATCGCCACTGCCACAGGAGAACTGTCTTTTATATCCGCTCAATCATaGTCCCTGATATTTCAAATG +
Preference number: 4 (lower is better)
Translates to: KQWPSGCHIATATGELSFISAQS*SLIFQM
Trigger: CATTTGAAATATCAGGGAGCATGATTGAGCGGATAT...AAAAGACAGTTCTCCTGTGGCAGTGGCGATGTGGCATCCAGAGGGCCATTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp AAAGGAAACCAAAAGCAAAGTCCCTGTGGTCACCCTTATTTATTGCTGAAGCAGGTTTGCTTCTGTAGGTaGTCCACCCATTCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: KGNQKQSPCGHPYLLLKQVCFCR*STHSCR
Trigger: TCTGCAGGAATGGGTGGAGCACCTACAGAAGCAAAC...CTGCTTCAGCAATAAATAAGGGTGACCACAGGGACTTTGCTTTTGGTTTCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp ATAGTCAGTCATTCGAATGTATACTCGCATCGGCAGTTAAGCCTCCACAAAGTAGTTTGCTTCTGTAGGTaGTCCACCCATTCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: IVSHSNVYSHRQLSLHKVVCFCR*STHSCR
Trigger: TCTGCAGGAATGGGTGGAGCACCTACAGAAGCAAAC...TACTTTGTGGAGGCTTAACTGCCGATGCGAGTATACATTCGAATGACTGACTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp ACATCTAAGAAAAGCAGGCTGCGATACAACAAGCATTTGTTAAGAAAAGCTCAGAACGAGAAAGGCTACTaGGACGCCCCAGGGAGTCTA +
Preference number: 4 (lower is better)
Translates to: TSKKSRLRYNKHLLRKAQNEKGY*DAPGSL
Trigger: TAGACTCCCTGGGGCGTCGCAGTAGCCTTTCTCGTT...CTGAGCTTTTCTTAACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
ENST00000478679.5
CDS-3UTR GCA 90 bp ATCTACAGGATAAGAAATGGCTTCATCTCCTCATCCATACAAGGTGAGAGCAAAAACACTCTCCCAAGGTaGCCAGCTCAAAGGCATCAG +
Preference number: 4 (lower is better)
Translates to: IYRIRNGFISSSIQGESKNTLPR*PAQRHQ
Trigger: CTGATGCCTTTGAGCTGGGCACCTTGGGAGAGTGTT...TTTGCTCTCACCTTGTATGGATGAGGAGATGAAGCCATTTCTTATCCTGTAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp AAACAATGGCCCTCTGGATGCCACATCGCCACTGCCACAGGAGAACTGTCTTTTTATAACAGAAATCACTaGAATTCAGGGAAGTTTGGG +
Preference number: 4 (lower is better)
Translates to: KQWPSGCHIATATGELSFYNRNH*NSGKFG
Trigger: CCCAAACTTCCCTGAATTGCAGTGATTTCTGTTATA...AAAAGACAGTTCTCCTGTGGCAGTGGCGATGTGGCATCCAGAGGGCCATTGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp CGATTACCAGAACACAGCCGTTGGAACTGGGCTCACAGCACCTTTGCTGCATATTACAGGCTTGCTATGTaGCTTATAACAGAAATCACT +
Preference number: 4 (lower is better)
Translates to: RLPEHSRWNWAHSTFAAYYRLAM*LITEIT
Trigger: AGTGATTTCTGTTATAAGGCACATAGCAAGCCTGTA...ATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp CATCTGAGCCATGACAGTAAGCTCTGCCTTTGGAAAGGAGAGCTCCCACTTCACACAGGTCACATTCAGTaGTTTTTGAAGCAGAAATTG +
Preference number: 4 (lower is better)
Translates to: HLSHDSKLCLWKGELPLHTGHIQ*FLKQKL
Trigger: CAATTTCTGCTTCAAAAAGCACTGAATGTGACCTGT...GTGAAGTGGGAGCTCTCCTTTCCAAAGGCAGAGCTTACTGTCATGGCTCAGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp CCATTAGCTTGTTCCATGCTGAATGAAGCCACCCAACTTTCTAAACAACGTGCTTTTGGAATTAACAGCTaGCCTGATGTCTCCTGTGCC +
Preference number: 4 (lower is better)
Translates to: PLACSMLNEATQLSKQRAFGINS*PDVSCA
Trigger: GGCACAGGAGACATCAGGGCAGCTGTTAATTCCAAA...AGCACGTTGTTTAGAAAGTTGGGTGGCTTCATTCAGCATGGAACAAGCTAATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp GAAATTGGTCTGAGTGAGGCCAGTGAAAACTCCTTACAACAAATCCCAGGAAAAATGCCACATCGCCACTaGCACAGGAGAACTGTCTTT +
Preference number: 4 (lower is better)
Translates to: EIGLSEASENSLQQIPGKMPHRH*HRRTVF
Trigger: AAAGACAGTTCTCCTGTGGCAGTGGCGATGTGGCAT...TTTTCCTGGGATTTGTTGTAAGGAGTTTTCACTGGCCTCACTCAGACCAATTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp GTGTATTTTGTTGTTACTGAACTAGCCTATACAGAACCGTCTGTGTCCTCCCAATCCACACGGGTGACATaGATGACGTCTCCTTTTGAG +
Preference number: 4 (lower is better)
Translates to: VYFVVTELAYTEPSVSSQSTRVT*MTSPFE
Trigger: CTCAAAAGGAGACGTCATCCATGTCACCCGTGTGGA...TTGGGAGGACACAGACGGTTCTGTATAGGCTAGTTCAGTAACAACAAAATACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp TTAAGCCTCCACAAAGTACAATGGGAAATATCAGGAACACTCTCAAAAGTTGTTGTTTGCTCAGGCCCGTaGTCAGCACGAGAATCCCAG +
Preference number: 4 (lower is better)
Translates to: LSLHKVQWEISGTLSKVVVCSGP*SARESQ
Trigger: CTGGGATTCTCGTGCTGACCACGGGCCTGAGCAAAC...AACAACTTTTGAGAGTGTTCCTGATATTTCCCATTGTACTTTGTGGAGGCTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp GCTTGTTCCATGCTGAATGAAGCCACCCAACTTTCTAAACAACGTGCTACTGCCTGTCATTCCTGTCGTTaGAAGCTTTCCCTGATAGAT +
Preference number: 4 (lower is better)
Translates to: ACSMLNEATQLSKQRATACHSCR*KLSLID
Trigger: ATCTATCAGGGAAAGCTTCCAACGACAGGAATGACA...GGCAGTAGCACGTTGTTTAGAAAGTTGGGTGGCTTCATTCAGCATGGAACAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp GTGTATTTTGTTGTTACTGAACTAGCCTATACAGAACCGTCTGTGTCCTCCCAACTGAATGAGGCTTTATaGTGGGGTTTCCCACAGACG +
Preference number: 4 (lower is better)
Translates to: VYFVVTELAYTEPSVSSQLNEAL*WGFPQT
Trigger: CGTCTGTGGGAAACCCCACCATAAAGCCTCATTCAG...TTGGGAGGACACAGACGGTTCTGTATAGGCTAGTTCAGTAACAACAAAATACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp CCTGCTACAACAGCAAACTCCAATAAACTCAAGTTGAATGGTTTCCCACTGCAAGTTCAGGTTTGCGCTTaGGCAGCAGCTTTTTCATGG +
Preference number: 4 (lower is better)
Translates to: PATTANSNKLKLNGFPLQVQVCA*AAAFSW
Trigger: CCATGAAAAAGCTGCTGCCCAAGCGCAAACCTGAAC...TTGCAGTGGGAAACCATTCAACTTGAGTTTATTGGAGTTTGCTGTTGTAGCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp CATCTGAGAATCACAGTACTCAGACAGCGGACAAGAGCAAACACCTCTAGGTGGTCTTATTCACGTAGCTaGAAAGGACATTCTAGCATG +
Preference number: 4 (lower is better)
Translates to: HLRITVLRQRTRANTSRWSYSRS*KGHSSM
Trigger: CATGCTAGAATGTCCTTTCCAGCTACGTGAATAAGA...CCACCTAGAGGTGTTTGCTCTTGTCCGCTGTCTGAGTACTGTGATTCTCAGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp AGGGGAAGGGCTGTTAAAAACACAAGTATTCTTGTGAAATACTTCGATCTGAGCTGCACTGGAACACAGTaGGGGAAACGTTCCCTGCTT +
Preference number: 4 (lower is better)
Translates to: RGRAVKNTSILVKYFDLSCTGTQ*GKRSLL
Trigger: AAGCAGGGAACGTTTCCCCCACTGTGTTCCAGTGCA...GCTCAGATCGAAGTATTTCACAAGAATACTTGTGTTTTTAACAGCCCTTCCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp ACATCTAAGAAAAGCAGGCTGCGATACAACAAGCATTTGTTAAGAAAAGCTCAGCTGAATACGTGGGTTTaGCGAAGGAGTGGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: TSKKSRLRYNKHLLRKAQLNTWV*RRSGQW
Trigger: CCACTGCCCACTCCTTCGCCAAACCCACGTATTCAG...CTGAGCTTTTCTTAACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR CAA 72 bp AGTCAATCCCTCCTGTCTGGATTCATCAGTCATGGTTaGATCGTCTCCATTCGCAGAATAAGCTCCAGCTTT +
Preference number: 4 (lower is better)
Translates to: SQSLLSGFISHG*IVSIRRISSSF
Trigger: AAAGCTGGAGCTTATTCTGCGAATGGAGACGATCAAACCATGACTGATGAATCCAGACAGGAGGGATTGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
3UTR CAA 72 bp GAGGCACAATTCAGGGTTGTTTCTCGAGAACACTCATaGGAAAACAATTCACTACTGCACGAAGAGGGCCAA +
Preference number: 4 (lower is better)
Translates to: EAQFRVVSREHS*ENNSLLHEEGQ
Trigger: TTGGCCCTCTTCGTGCAGTAGTGAATTGTTTTCCAATGAGTGTTCTCGAGAAACAACCCTGAATTGTGCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544132.2
3UTR CAA 72 bp ACCTCTGAACTGTGCGTGAGGAGGCACAATTCAGGGTaGTTTCTCGAGAACACTCATTGGAAAACAATTCAC +
Preference number: 4 (lower is better)
Translates to: TSELCVRRHNSG*FLENTHWKTIH
Trigger: GTGAATTGTTTTCCAATGAGTGTTCTCGAGAAACAACCCTGAATTGTGCCTCCTCACGCACAGTTCAGAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544132.2
CDS-3UTR TCA 90 bp ACGGTGAAACAGACACAGTTATATACAACAGGGCAGGTTTTTAAAAAGAGTTGCCCTCACTGTGTTCCGTaGGGACATTCACTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: TVKQTQLYTTGQVFKKSCPHCVP*GHSLQK
Trigger: CTTCTGCAGTGAATGTCCTCACGGAACACAGTGAGG...GCAACTCTTTTTAAAAACCTGCCCTGTTGTATATAACTGTGTCTGTTTCACCGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp TTGATGCTACAACTGAATGCAACAGGTCACATTCAGTGCTTTTTGAAGCAGAAACCTCACTGTGTTCCGTaGGGACATTCACTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: LMLQLNATGHIQCFLKQKPHCVP*GHSLQK
Trigger: CTTCTGCAGTGAATGTCCTCACGGAACACAGTGAGG...TTTCTGCTTCAAAAAGCACTGAATGTGACCTGTTGCATTCAGTTGTAGCATCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp ACATCTAAGAAAAGCAGGCTGCGATACAACAAGCATTTGTTAAGAAAAGCTCAGCCTCACTGTGTTCCGTaGGGACATTCACTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: TSKKSRLRYNKHLLRKAQPHCVP*GHSLQK
Trigger: CTTCTGCAGTGAATGTCCTCACGGAACACAGTGAGG...CTGAGCTTTTCTTAACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
ENST00000478679.5
CDS-3UTR TCA 90 bp AGGGGAAGGGCTGTTAAAAACACAAGTATTCTTGTGAAATACTTCGATCTGAGCGGTATGAGATGGCACTaGATGAGGCTTTATGGTGGG +
Preference number: 4 (lower is better)
Translates to: RGRAVKNTSILVKYFDLSGMRWH*MRLYGG
Trigger: CCCACCATAAAGCCTCATTCAGTGCCATCTCATACC...GCTCAGATCGAAGTATTTCACAAGAATACTTGTGTTTTTAACAGCCCTTCCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp TTGATGCTACAACTGAATGCAACAGGTCACATTCAGTGCTTTTTGAAGCAGAAACGCGAACTCCTCATCTaGAGGCTTCCGTTCAGGTTT +
Preference number: 4 (lower is better)
Translates to: LMLQLNATGHIQCFLKQKRELLI*RLPFRF
Trigger: AAACCTGAACGGAAGCCTTCAGATGAGGAGTTCGCG...TTTCTGCTTCAAAAAGCACTGAATGTGACCTGTTGCATTCAGTTGTAGCATCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp ACATCTAAGAAAAGCAGGCTGCGATACAACAAGCATTTGTTAAGAAAAGCTCAGCGCGAACTCCTCATCTaGAGGCTTCCGTTCAGGTTT +
Preference number: 4 (lower is better)
Translates to: TSKKSRLRYNKHLLRKAQRELLI*RLPFRF
Trigger: AAACCTGAACGGAAGCCTTCAGATGAGGAGTTCGCG...CTGAGCTTTTCTTAACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
ENST00000478679.5
CDS-3UTR TCA 90 bp CTTCTTATTCACGTAGCTGGAAAGGACATTCTAGCATGGGGATTAGCCCGGACAATGACTTTCAGAATCTaGGCATCTTCTTCCAAAGCA +
Preference number: 4 (lower is better)
Translates to: LLIHVAGKDILAWGLARTMTFRI*ASSSKA
Trigger: TGCTTTGGAAGAAGATGCTCAGATTCTGAAAGTCAT...TGTCCGGGCTAATCCCCATGCTAGAATGTCCTTTCCAGCTACGTGAATAAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp TTGATGCTACAACTGAATGCAACAGGTCACATTCAGTGCTTTTTGAAGCAGAAAGTCTTCCGAGAGGTCTaGAGGCTCCAAACGAGAAAG +
Preference number: 4 (lower is better)
Translates to: LMLQLNATGHIQCFLKQKVFREV*RLQTRK
Trigger: CTTTCTCGTTTGGAGCCTTCAGACCTCTCGGAAGAC...TTTCTGCTTCAAAAAGCACTGAATGTGACCTGTTGCATTCAGTTGTAGCATCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp ACATCTAAGAAAAGCAGGCTGCGATACAACAAGCATTTGTTAAGAAAAGCTCAGGTCTTCCGAGAGGTCTaGAGGCTCCAAACGAGAAAG +
Preference number: 4 (lower is better)
Translates to: TSKKSRLRYNKHLLRKAQVFREV*RLQTRK
Trigger: CTTTCTCGTTTGGAGCCTTCAGACCTCTCGGAAGAC...CTGAGCTTTTCTTAACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
ENST00000478679.5
CDS-3UTR TCA 90 bp CATCTGAGAATCACAGTACTCAGACAGCGGACAAGAGCAAACACCTCTAGGTGGGTATTTTGTTGTTACTaGACTAGCCTATACAGAACC +
Preference number: 4 (lower is better)
Translates to: HLRITVLRQRTRANTSRWVFCCY*TSLYRT
Trigger: GGTTCTGTATAGGCTAGTTCAGTAACAACAAAATAC...CCACCTAGAGGTGTTTGCTCTTGTCCGCTGTCTGAGTACTGTGATTCTCAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp ACGGTGAAACAGACACAGTTATATACAACAGGGCAGGTTTTTAAAAAGAGTTGCGGATTTTACTTTCGGTaGGCACTGAAGCCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: TVKQTQLYTTGQVFKKSCGFYFR*ALKPAG
Trigger: GCCAGCAGGCTTCAGTGCTCACCGAAAGTAAAATCC...GCAACTCTTTTTAAAAACCTGCCCTGTTGTATATAACTGTGTCTGTTTCACCGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp CTTCTTATTCACGTAGCTGGAAAGGACATTCTAGCATGGGGATTAGCCCGGACAAACATCGCTGAAAACTaGAAGTGCTTCACATCTACA +
Preference number: 4 (lower is better)
Translates to: LLIHVAGKDILAWGLARTNIAEN*KCFTST
Trigger: TGTAGATGTGAAGCACTTTCAGTTTTCAGCGATGTT...TGTCCGGGCTAATCCCCATGCTAGAATGTCCTTTCCAGCTACGTGAATAAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp TCAGGTCCTCAGAGTCAATCCCTCCTGTCTGGATTCATCAGTCATGGTTTGATCAACATCGCTGAAAACTaGAAGTGCTTCACATCTACA +
Preference number: 4 (lower is better)
Translates to: SGPQSQSLLSGFISHGLINIAEN*KCFTST
Trigger: TGTAGATGTGAAGCACTTTCAGTTTTCAGCGATGTT...GATCAAACCATGACTGATGAATCCAGACAGGAGGGATTGACTCTGAGGACCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp TATCAAGTTCCCACCCCCTTGGGAGGTCACACGGTGAAACAGACACAGTTATATCTACCAGTTGATTGTTaGTATTATCGGTCATGTCCA +
Preference number: 4 (lower is better)
Translates to: YQVPTPLGGHTVKQTQLYLPVDC*YYRSCP
Trigger: TGGACATGACCGATAATAGCAACAATCAACTGGTAG...ATATAACTGTGTCTGTTTCACCGTGTGACCTCCCAAGGGGGTGGGAACTTGATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp CCTGCTACAACAGCAAACTCCAATAAACTCAAGTTGAATGGTTTCCCACTGCAAAACTTCTCACTGGTCTaGAATGGCCGTAGGTACGTT +
Preference number: 4 (lower is better)
Translates to: PATTANSNKLKLNGFPLQNFSLV*NGRRYV
Trigger: AACGTACCTACGGCCATTGCAGACCAGTGAGAAGTT...TTGCAGTGGGAAACCATTCAACTTGAGTTTATTGGAGTTTGCTGTTGTAGCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp ATAGTCAGTCATTCGAATGTATACTCGCATCGGCAGTTAAGCCTCCACAAAGTAAACTTCTCACTGGTCTaGAATGGCCGTAGGTACGTT +
Preference number: 4 (lower is better)
Translates to: IVSHSNVYSHRQLSLHKVNFSLV*NGRRYV
Trigger: AACGTACCTACGGCCATTGCAGACCAGTGAGAAGTT...TACTTTGTGGAGGCTTAACTGCCGATGCGAGTATACATTCGAATGACTGACTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp GTGTATTTTGTTGTTACTGAACTAGCCTATACAGAACCGTCTGTGTCCTCCCAAAACTTCTCACTGGTCTaGAATGGCCGTAGGTACGTT +
Preference number: 4 (lower is better)
Translates to: VYFVVTELAYTEPSVSSQNFSLV*NGRRYV
Trigger: AACGTACCTACGGCCATTGCAGACCAGTGAGAAGTT...TTGGGAGGACACAGACGGTTCTGTATAGGCTAGTTCAGTAACAACAAAATACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp ACATCTAAGAAAAGCAGGCTGCGATACAACAAGCATTTGTTAAGAAAAGCTCAGGCTTCCGTCAGGATCTaGAGCTCAAGCTCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: TSKKSRLRYNKHLLRKAQASVRI*SSSSFL
Trigger: GAGGAAAGAGCTTGAGCTGCAGATCCTGACGGAAGC...CTGAGCTTTTCTTAACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
ENST00000478679.5
CDS-3UTR GCA 90 bp ATCTACAGGATAAGAAATGGCTTCATCTCCTCATCCATACAAGGTGAGAGCAAAGTTTGCTTCTGTAGGTaGTCCACCCATTCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: IYRIRNGFISSSIQGESKVCFCR*STHSCR
Trigger: TCTGCAGGAATGGGTGGAGCACCTACAGAAGCAAAC...TTTGCTCTCACCTTGTATGGATGAGGAGATGAAGCCATTTCTTATCCTGTAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp AAAACAGTGTATTTTGTTGTTACTGAACTAGCCTATACAGAACCGTCTGTGTCCGACGTGACCTTCGTTTaGTTCTGTAGGTGCTCCACC +
Preference number: 4 (lower is better)
Translates to: KTVYFVVTELAYTEPSVSDVTFV*FCRCST
Trigger: GGTGGAGCACCTACAGAAGCAAACGAAGGTCACGTC...GGACACAGACGGTTCTGTATAGGCTAGTTCAGTAACAACAAAATACACTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp ACATCTAAGAAAAGCAGGCTGCGATACAACAAGCATTTGTTAAGAAAAGCTCAGGACGTGACCTTCGTTTaGTTCTGTAGGTGCTCCACC +
Preference number: 4 (lower is better)
Translates to: TSKKSRLRYNKHLLRKAQDVTFV*FCRCST
Trigger: GGTGGAGCACCTACAGAAGCAAACGAAGGTCACGTC...CTGAGCTTTTCTTAACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
ENST00000478679.5
CDS-3UTR GCA 90 bp ACATCTAAGAAAAGCAGGCTGCGATACAACAAGCATTTGTTAAGAAAAGCTCAGGCTTCCGTTCAGGTTTaGGCTTGGGCAGCAGCTTTT +
Preference number: 4 (lower is better)
Translates to: TSKKSRLRYNKHLLRKAQASVQV*AWAAAF
Trigger: AAAAGCTGCTGCCCAAGCGCAAACCTGAACGGAAGC...CTGAGCTTTTCTTAACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
ENST00000478679.5
CDS-3UTR GCA 90 bp TTTGTTGTTACTGAACTAGCCTATACAGAACCGTCTGTGTCCTCCCAAAACGCAGGGGGAAACGTTCCCTaGTTATGCCTATGTTACTTA +
Preference number: 4 (lower is better)
Translates to: FVVTELAYTEPSVSSQNAGGNVP*LCLCYL
Trigger: TAAGTAACATAGGCATAAGCAGGGAACGTTTCCCCC...TGCGTTTTGGGAGGACACAGACGGTTCTGTATAGGCTAGTTCAGTAACAACAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp TTAAGCCTCCACAAAGTACAATGGGAAATATCAGGAACACTCTCAAAAGTTGTTGGCCCAGAGCCCACATaGTGTTCTGCACGATTACCA +
Preference number: 4 (lower is better)
Translates to: LSLHKVQWEISGTLSKVVGPEPT*CSARLP
Trigger: TGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCC...AACAACTTTTGAGAGTGTTCCTGATATTTCCCATTGTACTTTGTGGAGGCTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp CCTCTACTACAGTCCAGTAGTCTACACTTGCAGAGGCTGAATGCTTCAGCTTTCTCCTCATTGGTCTGCTaGAAGTTAAACTTTGCTCTT +
Preference number: 4 (lower is better)
Translates to: PLLQSSSLHLQRLNASAFSSLVC*KLNFAL
Trigger: AAGAGCAAAGTTTAACTTCCAGCAGACCAATGAGGA...GAAAGCTGAAGCATTCAGCCTCTGCAAGTGTAGACTACTGGACTGTAGTAGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp AGAACACAGCCGTTGGAACTGGGCTCACAGCACCTTTGCTGCATATATTCTTCTTCCTCATTGGTCTGCTaGAAGTTAAACTTTGCTCTT +
Preference number: 4 (lower is better)
Translates to: RTQPLELGSQHLCCIYSSSSLVC*KLNFAL
Trigger: AAGAGCAAAGTTTAACTTCCAGCAGACCAATGAGGA...AGAAGAATATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp AGGGGAAGGGCTGTTAAAAACACAAGTATTCTTGTGAAATACTTCGATCTGAGCTCAGTGTTCCTGATTTaGGAGACACAGGCTTCTCGC +
Preference number: 4 (lower is better)
Translates to: RGRAVKNTSILVKYFDLSSVFLI*ETQASR
Trigger: GCGAGAAGCCTGTGTCTCCCAAATCAGGAACACTGA...GCTCAGATCGAAGTATTTCACAAGAATACTTGTGTTTTTAACAGCCCTTCCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp CAAAGGAGTAACCCTCGGGCAAATCGTGGCCCCTTTAAACGTTTATATCAAGTTGAGCTTCGGGCAACTTaGTGCATTCTTCTAAAGACT +
Preference number: 4 (lower is better)
Translates to: QRSNPRANRGPFKRLYQVELRAT*CILLKT
Trigger: AGTCTTTAGAAGAATGCACCAAGTTGCCCGAAGCTC...AACTTGATATAAACGTTTAAAGGGGCCACGATTTGCCCGAGGGTTACTCCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp CCTGCTACAACAGCAAACTCCAATAAACTCAAGTTGAATGGTTTCCCACTGCAATCCTGCAGATCCTGCTaGTTGTTGCACGACACTAAT +
Preference number: 4 (lower is better)
Translates to: PATTANSNKLKLNGFPLQSCRSC*LLHDTN
Trigger: ATTAGTGTCGTGCAACAACCAGCAGGATCTGCAGGA...TTGCAGTGGGAAACCATTCAACTTGAGTTTATTGGAGTTTGCTGTTGTAGCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp CCTGCTACAACAGCAAACTCCAATAAACTCAAGTTGAATGGTTTCCCACTGCAAGTGTTTGCCTTGTTTTaGCGCTGGTGCAGTAAGCTT +
Preference number: 4 (lower is better)
Translates to: PATTANSNKLKLNGFPLQVFALF*RWCSKL
Trigger: AAGCTTACTGCACCAGCGCCAAAACAAGGCAAACAC...TTGCAGTGGGAAACCATTCAACTTGAGTTTATTGGAGTTTGCTGTTGTAGCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp TATCAAGTTCCCACCCCCTTGGGAGGTCACACGGTGAAACAGACACAGTTATATTCTTATTCACGTAGCTaGAAAGGACATTCTAGCATG +
Preference number: 4 (lower is better)
Translates to: YQVPTPLGGHTVKQTQLYSYSRS*KGHSSM
Trigger: CATGCTAGAATGTCCTTTCCAGCTACGTGAATAAGA...ATATAACTGTGTCTGTTTCACCGTGTGACCTCCCAAGGGGGTGGGAACTTGATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp AAAGGAAACCAAAAGCAAAGTCCCTGTGGTCACCCTTATTTATTGCTGAAGCAGAGAAACCCGCAGGTCTaGGACTGTAATGCTGCTTTA +
Preference number: 4 (lower is better)
Translates to: KGNQKQSPCGHPYLLLKQRNPQV*DCNAAL
Trigger: TAAAGCAGCATTACAGTCCCAGACCTGCGGGTTTCT...CTGCTTCAGCAATAAATAAGGGTGACCACAGGGACTTTGCTTTTGGTTTCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp AAAGGAAACCAAAAGCAAAGTCCCTGTGGTCACCCTTATTTATTGCTGAAGCAGTATCAGCCTGCAGCATaGCCTCCATCTGTTTTCATC +
Preference number: 4 (lower is better)
Translates to: KGNQKQSPCGHPYLLLKQYQPAA*PPSVFI
Trigger: GATGAAAACAGATGGAGGCCATGCTGCAGGCTGATA...CTGCTTCAGCAATAAATAAGGGTGACCACAGGGACTTTGCTTTTGGTTTCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp AGAACACAGCCGTTGGAACTGGGCTCACAGCACCTTTGCTGCATATATTCTTCTCTCCACAAAGTACAATaGGAAATATCAGGAACACTC +
Preference number: 4 (lower is better)
Translates to: RTQPLELGSQHLCCIYSSLHKVQ*EISGTL
Trigger: GAGTGTTCCTGATATTTCCCATTGTACTTTGTGGAG...AGAAGAATATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp GCTTGTTCCATGCTGAATGAAGCCACCCAACTTTCTAAACAACGTGCTACTGCCGAGTTTCACTGCAGCTaGTTGCTGAAAATAATGATG +
Preference number: 4 (lower is better)
Translates to: ACSMLNEATQLSKQRATAEFHCS*LLKIMM
Trigger: CATCATTATTTTCAGCAACCAGCTGCAGTGAAACTC...GGCAGTAGCACGTTGTTTAGAAAGTTGGGTGGCTTCATTCAGCATGGAACAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp TTAAGCCTCCACAAAGTACAATGGGAAATATCAGGAACACTCTCAAAAGTTGTTGAAACAATGGCCCTCTaGATGCCACATCGCCACTGC +
Preference number: 4 (lower is better)
Translates to: LSLHKVQWEISGTLSKVVETMAL*MPHRHC
Trigger: GCAGTGGCGATGTGGCATCCAGAGGGCCATTGTTTC...AACAACTTTTGAGAGTGTTCCTGATATTTCCCATTGTACTTTGTGGAGGCTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR CAA 72 bp CAAGCGTTATTTCAAAGGGAACACCATTTAGGCCATTaGCAAAGGCCTGGTGATGGCTTAAACCTACCTTCT +
Preference number: 4 (lower is better)
Translates to: QALFQREHHLGH*QRPGDGLNLPS
Trigger: AGAAGGTAGGTTTAAGCCATCACCAGGCCTTTGCAAATGGCCTAAATGGTGTTCCCTTTGAAATAACGCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp CCTGCTACAACAGCAAACTCCAATAAACTCAAGTTGAATGGTTTCCCACTGCAAAGTGTGCAAAGACTGTaGTCCAAGGGAGTCAAAAGA +
Preference number: 4 (lower is better)
Translates to: PATTANSNKLKLNGFPLQSVQRL*SKGVKR
Trigger: TCTTTTGACTCCCTTGGATCACAGTCTTTGCACACT...TTGCAGTGGGAAACCATTCAACTTGAGTTTATTGGAGTTTGCTGTTGTAGCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp GAAATTGGTCTGAGTGAGGCCAGTGAAAACTCCTTACAACAAATCCCAGGAAAAGATTGGCACAATACGTaGGGTACAGGGTTTTCATCT +
Preference number: 4 (lower is better)
Translates to: EIGLSEASENSLQQIPGKDWHNT*GTGFSS
Trigger: AGATGAAAACCCTGTACCTCACGTATTGTGCCAATC...TTTTCCTGGGATTTGTTGTAAGGAGTTTTCACTGGCCTCACTCAGACCAATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp TTGATGCTACAACTGAATGCAACAGGTCACATTCAGTGCTTTTTGAAGCAGAAATTCACTGCAGAAGGGTaGTTGGCACAATACGTGAGG +
Preference number: 4 (lower is better)
Translates to: LMLQLNATGHIQCFLKQKFTAEG*LAQYVR
Trigger: CCTCACGTATTGTGCCAATCACCCTTCTGCAGTGAA...TTTCTGCTTCAAAAAGCACTGAATGTGACCTGTTGCATTCAGTTGTAGCATCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp ACATCTAAGAAAAGCAGGCTGCGATACAACAAGCATTTGTTAAGAAAAGCTCAGTTCACTGCAGAAGGGTaGTTGGCACAATACGTGAGG +
Preference number: 4 (lower is better)
Translates to: TSKKSRLRYNKHLLRKAQFTAEG*LAQYVR
Trigger: CCTCACGTATTGTGCCAATCACCCTTCTGCAGTGAA...CTGAGCTTTTCTTAACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
ENST00000478679.5
CDS-3UTR TCA 90 bp ATAGTCAGTCATTCGAATGTATACTCGCATCGGCAGTTAAGCCTCCACAAAGTAGGGCTGAAAGGTTTTTaGAGGCAGCCATGGATTTTT +
Preference number: 4 (lower is better)
Translates to: IVSHSNVYSHRQLSLHKVGLKGF*RQPWIF
Trigger: AAAAATCCATGGCTGCCTTCAAAAACCTTTCAGCCC...TACTTTGTGGAGGCTTAACTGCCGATGCGAGTATACATTCGAATGACTGACTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp AAAACAGTGTATTTTGTTGTTACTGAACTAGCCTATACAGAACCGTCTGTGTCCGGTTTCCCACAGACGTaGCCTTCGTTTGCTTCTGTA +
Preference number: 4 (lower is better)
Translates to: KTVYFVVTELAYTEPSVSGFPQT*PSFASV
Trigger: TACAGAAGCAAACGAAGGTCACGTCTGTGGGAAACC...GGACACAGACGGTTCTGTATAGGCTAGTTCAGTAACAACAAAATACACTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp ACATCTAAGAAAAGCAGGCTGCGATACAACAAGCATTTGTTAAGAAAAGCTCAGGGTTTCCCACAGACGTaGCCTTCGTTTGCTTCTGTA +
Preference number: 4 (lower is better)
Translates to: TSKKSRLRYNKHLLRKAQGFPQT*PSFASV
Trigger: TACAGAAGCAAACGAAGGTCACGTCTGTGGGAAACC...CTGAGCTTTTCTTAACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
ENST00000478679.5
CDS-3UTR TCA 90 bp ACGGTGAAACAGACACAGTTATATACAACAGGGCAGGTTTTTAAAAAGAGTTGCGGTATGAGATGGCACTaGATGAGGCTTTATGGTGGG +
Preference number: 4 (lower is better)
Translates to: TVKQTQLYTTGQVFKKSCGMRWH*MRLYGG
Trigger: CCCACCATAAAGCCTCATTCAGTGCCATCTCATACC...GCAACTCTTTTTAAAAACCTGCCCTGTTGTATATAACTGTGTCTGTTTCACCGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp ACATCTAAGAAAAGCAGGCTGCGATACAACAAGCATTTGTTAAGAAAAGCTCAGGGTATGAGATGGCACTaGATGAGGCTTTATGGTGGG +
Preference number: 4 (lower is better)
Translates to: TSKKSRLRYNKHLLRKAQGMRWH*MRLYGG
Trigger: CCCACCATAAAGCCTCATTCAGTGCCATCTCATACC...CTGAGCTTTTCTTAACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
ENST00000478679.5
CDS-3UTR TCA 90 bp ATAGTCAGTCATTCGAATGTATACTCGCATCGGCAGTTAAGCCTCCACAAAGTAAGTGCCTTGCCATGTTaGATTGAGTGTTTGCCTTGT +
Preference number: 4 (lower is better)
Translates to: IVSHSNVYSHRQLSLHKVSALPC*IECLPC
Trigger: ACAAGGCAAACACTCAATTCAACATGGCAAGGCACT...TACTTTGTGGAGGCTTAACTGCCGATGCGAGTATACATTCGAATGACTGACTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp GTGTATTTTGTTGTTACTGAACTAGCCTATACAGAACCGTCTGTGTCCTCCCAATCATCAGTCATGGTTTaGTCGTCTCCATTCGCAGAA +
Preference number: 4 (lower is better)
Translates to: VYFVVTELAYTEPSVSSQSSVMV*SSPFAE
Trigger: TTCTGCGAATGGAGACGATCAAACCATGACTGATGA...TTGGGAGGACACAGACGGTTCTGTATAGGCTAGTTCAGTAACAACAAAATACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp AAAGGAAACCAAAAGCAAAGTCCCTGTGGTCACCCTTATTTATTGCTGAAGCAGACTTCTGAATGGGACTaGAGTGTATCTCTGCAGGTA +
Preference number: 4 (lower is better)
Translates to: KGNQKQSPCGHPYLLLKQTSEWD*SVSLQV
Trigger: TACCTGCAGAGATACACTTCAGTCCCATTCAGAAGT...CTGCTTCAGCAATAAATAAGGGTGACCACAGGGACTTTGCTTTTGGTTTCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp TCAGGTCCTCAGAGTCAATCCCTCCTGTCTGGATTCATCAGTCATGGTTTGATCTTGCTTTATTCTTGCTaGAGGAGGGGATTTTACTTT +
Preference number: 4 (lower is better)
Translates to: SGPQSQSLLSGFISHGLILLYSC*RRGFYF
Trigger: AAAGTAAAATCCCCTCCTTCAGCAAGAATAAAGCAA...GATCAAACCATGACTGATGAATCCAGACAGGAGGGATTGACTCTGAGGACCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp ATAGTCAGTCATTCGAATGTATACTCGCATCGGCAGTTAAGCCTCCACAAAGTAATTAACACTGGGCTCTaGCTGCTCCTCAATGTTCTT +
Preference number: 4 (lower is better)
Translates to: IVSHSNVYSHRQLSLHKVINTGL*LLLNVL
Trigger: AAGAACATTGAGGAGCAGTCAGAGCCCAGTGTTAAT...TACTTTGTGGAGGCTTAACTGCCGATGCGAGTATACATTCGAATGACTGACTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp GGATTTGATGCTACAACTGAATGCAACAGGTCACATTCAGTGCTTTTTGAAGCATGCAGCAACTGTGTTTaGGTGTTGTGGTCTACACAG +
Preference number: 4 (lower is better)
Translates to: GFDATTECNRSHSVLFEACSNCV*VLWSTQ
Trigger: CTGTGTAGACCACAACACTCAAACACAGTTGCTGCA...TGCTTCAAAAAGCACTGAATGTGACCTGTTGCATTCAGTTGTAGCATCAAATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp TTTGTTGTTACTGAACTAGCCTATACAGAACCGTCTGTGTCCTCCCAAAACGCATGCGTGAACTTGAATTaGGTGTTTGCCTTGTTTTGG +
Preference number: 4 (lower is better)
Translates to: FVVTELAYTEPSVSSQNACVNLN*VFALFW
Trigger: CCAAAACAAGGCAAACACTCAATTCAAGTTCACGCA...TGCGTTTTGGGAGGACACAGACGGTTCTGTATAGGCTAGTTCAGTAACAACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp GAAATTGGTCTGAGTGAGGCCAGTGAAAACTCCTTACAACAAATCCCAGGAAAATTTGAAGTCCGAGTGTaGAAAGACTGTGATCCAAGG +
Preference number: 4 (lower is better)
Translates to: EIGLSEASENSLQQIPGKFEVRV*KDCDPR
Trigger: CCTTGGATCACAGTCTTTGCACACTCGGACTTCAAA...TTTTCCTGGGATTTGTTGTAAGGAGTTTTCACTGGCCTCACTCAGACCAATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp CATCTGAGAATCACAGTACTCAGACAGCGGACAAGAGCAAACACCTCTAGGTGGCTGGAAGTTAAACTTTaGTCTTACTACCAGTTGATT +
Preference number: 4 (lower is better)
Translates to: HLRITVLRQRTRANTSRWLEVKL*SYYQLI
Trigger: AATCAACTGGTAGTAAGAGCAAAGTTTAACTTCCAG...CCACCTAGAGGTGTTTGCTCTTGTCCGCTGTCTGAGTACTGTGATTCTCAGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp ACATCTAAGAAAAGCAGGCTGCGATACAACAAGCATTTGTTAAGAAAAGCTCAGCGTGAGGACATTCACTaGAGAAGGGTGATTGGCACA +
Preference number: 4 (lower is better)
Translates to: TSKKSRLRYNKHLLRKAQREDIH*RRVIGT
Trigger: TGTGCCAATCACCCTTCTGCAGTGAATGTCCTCACG...CTGAGCTTTTCTTAACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
ENST00000478679.5
CDS-3UTR GCA 90 bp GCTTGTTCCATGCTGAATGAAGCCACCCAACTTTCTAAACAACGTGCTACTGCCATATCCGCTCAATCATaGTCCCTGATATTTCAAATG +
Preference number: 4 (lower is better)
Translates to: ACSMLNEATQLSKQRATAISAQS*SLIFQM
Trigger: CATTTGAAATATCAGGGAGCATGATTGAGCGGATAT...GGCAGTAGCACGTTGTTTAGAAAGTTGGGTGGCTTCATTCAGCATGGAACAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp CTTCTTATTCACGTAGCTGGAAAGGACATTCTAGCATGGGGATTAGCCCGGACAATATCCGCTCAATCATaGTCCCTGATATTTCAAATG +
Preference number: 4 (lower is better)
Translates to: LLIHVAGKDILAWGLARTISAQS*SLIFQM
Trigger: CATTTGAAATATCAGGGAGCATGATTGAGCGGATAT...TGTCCGGGCTAATCCCCATGCTAGAATGTCCTTTCCAGCTACGTGAATAAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp ACATCTAAGAAAAGCAGGCTGCGATACAACAAGCATTTGTTAAGAAAAGCTCAGGTTTGCTTCTGTAGGTaGTCCACCCATTCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: TSKKSRLRYNKHLLRKAQVCFCR*STHSCR
Trigger: TCTGCAGGAATGGGTGGAGCACCTACAGAAGCAAAC...CTGAGCTTTTCTTAACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
ENST00000478679.5
CDS-3UTR GCA 90 bp GAAATTGGTCTGAGTGAGGCCAGTGAAAACTCCTTACAACAAATCCCAGGAAAAGTTGAATTGAGTGTTTaGCTTGTTTTGGCGCTGGTG +
Preference number: 4 (lower is better)
Translates to: EIGLSEASENSLQQIPGKVELSV*LVLALV
Trigger: CACCAGCGCCAAAACAAGGCAAACACTCAATTCAAC...TTTTCCTGGGATTTGTTGTAAGGAGTTTTCACTGGCCTCACTCAGACCAATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp CCATTAGCTTGTTCCATGCTGAATGAAGCCACCCAACTTTCTAAACAACGTGCTATCAGGTCAGTGCCTTaGCATGTTGAATTGAGTGTT +
Preference number: 4 (lower is better)
Translates to: PLACSMLNEATQLSKQRAIRSVP*HVELSV
Trigger: AACACTCAATTCAACATGGCAAGGCACTGACCTGAT...AGCACGTTGTTTAGAAAGTTGGGTGGCTTCATTCAGCATGGAACAAGCTAATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp CCATTAGCTTGTTCCATGCTGAATGAAGCCACCCAACTTTCTAAACAACGTGCTACACCAAATAGAGCGTaGATGGGACAGAACACAATT +
Preference number: 4 (lower is better)
Translates to: PLACSMLNEATQLSKQRATPNRA*MGQNTI
Trigger: AATTGTGTTCTGTCCCATGCACGCTCTATTTGGTGT...AGCACGTTGTTTAGAAAGTTGGGTGGCTTCATTCAGCATGGAACAAGCTAATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp AAAGGAAACCAAAAGCAAAGTCCCTGTGGTCACCCTTATTTATTGCTGAAGCAGTCCAAACTCCGATACTaGCCCTGGAACAGTTTTGAA +
Preference number: 4 (lower is better)
Translates to: KGNQKQSPCGHPYLLLKQSKLRY*PWNSFE
Trigger: TTCAAAACTGTTCCAGGGCCAGTATCGGAGTTTGGA...CTGCTTCAGCAATAAATAAGGGTGACCACAGGGACTTTGCTTTTGGTTTCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp ATAGTCAGTCATTCGAATGTATACTCGCATCGGCAGTTAAGCCTCCACAAAGTATCCAAACTCCGATACTaGCCCTGGAACAGTTTTGAA +
Preference number: 4 (lower is better)
Translates to: IVSHSNVYSHRQLSLHKVSKLRY*PWNSFE
Trigger: TTCAAAACTGTTCCAGGGCCAGTATCGGAGTTTGGA...TACTTTGTGGAGGCTTAACTGCCGATGCGAGTATACATTCGAATGACTGACTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp TTGATGCTACAACTGAATGCAACAGGTCACATTCAGTGCTTTTTGAAGCAGAAATCCACACGGGTGACATaGATGACGTCTCCTTTTGAG +
Preference number: 4 (lower is better)
Translates to: LMLQLNATGHIQCFLKQKSTRVT*MTSPFE
Trigger: CTCAAAAGGAGACGTCATCCATGTCACCCGTGTGGA...TTTCTGCTTCAAAAAGCACTGAATGTGACCTGTTGCATTCAGTTGTAGCATCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp ACATCTAAGAAAAGCAGGCTGCGATACAACAAGCATTTGTTAAGAAAAGCTCAGTCAGTGTTCCTGATTTaGGAGACACAGGCTTCTCGC +
Preference number: 4 (lower is better)
Translates to: TSKKSRLRYNKHLLRKAQSVFLI*ETQASR
Trigger: GCGAGAAGCCTGTGTCTCCCAAATCAGGAACACTGA...CTGAGCTTTTCTTAACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp GAAATTGGTCTGAGTGAGGCCAGTGAAAACTCCTTACAACAAATCCCAGGAAAAAACTTAACTTCTCACTaGTCTGCAATGGCCGTAGGT +
Preference number: 4 (lower is better)
Translates to: EIGLSEASENSLQQIPGKNLTSH*SAMAVG
Trigger: ACCTACGGCCATTGCAGACCAGTGAGAAGTTAAGTT...TTTTCCTGGGATTTGTTGTAAGGAGTTTTCACTGGCCTCACTCAGACCAATTTC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp ATAGTCAGTCATTCGAATGTATACTCGCATCGGCAGTTAAGCCTCCACAAAGTAAACTTAACTTCTCACTaGTCTGCAATGGCCGTAGGT +
Preference number: 4 (lower is better)
Translates to: IVSHSNVYSHRQLSLHKVNLTSH*SAMAVG
Trigger: ACCTACGGCCATTGCAGACCAGTGAGAAGTTAAGTT...TACTTTGTGGAGGCTTAACTGCCGATGCGAGTATACATTCGAATGACTGACTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp AGGGGAAGGGCTGTTAAAAACACAAGTATTCTTGTGAAATACTTCGATCTGAGCTCCTGCAGATCCTGCTaGTTGTTGCACGACACTAAT +
Preference number: 4 (lower is better)
Translates to: RGRAVKNTSILVKYFDLSSCRSC*LLHDTN
Trigger: ATTAGTGTCGTGCAACAACCAGCAGGATCTGCAGGA...GCTCAGATCGAAGTATTTCACAAGAATACTTGTGTTTTTAACAGCCCTTCCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp ACATCTAAGAAAAGCAGGCTGCGATACAACAAGCATTTGTTAAGAAAAGCTCAGCTGAATGAGGCTTTATaGTGGGGTTTCCCACAGACG +
Preference number: 4 (lower is better)
Translates to: TSKKSRLRYNKHLLRKAQLNEAL*WGFPQT
Trigger: CGTCTGTGGGAAACCCCACCATAAAGCCTCATTCAG...CTGAGCTTTTCTTAACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
ENST00000478679.5
CDS-3UTR CCA 90 bp ACATCTAAGAAAAGCAGGCTGCGATACAACAAGCATTTGTTAAGAAAAGCTCAGGTTCAGGTTTGCGCTTaGGCAGCAGCTTTTTCATGG +
Preference number: 4 (lower is better)
Translates to: TSKKSRLRYNKHLLRKAQVQVCA*AAAFSW
Trigger: CCATGAAAAAGCTGCTGCCCAAGCGCAAACCTGAAC...CTGAGCTTTTCTTAACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAGATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
ENST00000478679.5
CDS-3UTR CCA 90 bp TTGATGCTACAACTGAATGCAACAGGTCACATTCAGTGCTTTTTGAAGCAGAAAGTTCAGGTTTGCGCTTaGGCAGCAGCTTTTTCATGG +
Preference number: 4 (lower is better)
Translates to: LMLQLNATGHIQCFLKQKVQVCA*AAAFSW
Trigger: CCATGAAAAAGCTGCTGCCCAAGCGCAAACCTGAAC...TTTCTGCTTCAAAAAGCACTGAATGTGACCTGTTGCATTCAGTTGTAGCATCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp ATCTACAGGATAAGAAATGGCTTCATCTCCTCATCCATACAAGGTGAGAGCAAAGTGTTTGCCTTGTTTTaGCGCTGGTGCAGTAAGCTT +
Preference number: 4 (lower is better)
Translates to: IYRIRNGFISSSIQGESKVFALF*RWCSKL
Trigger: AAGCTTACTGCACCAGCGCCAAAACAAGGCAAACAC...TTTGCTCTCACCTTGTATGGATGAGGAGATGAAGCCATTTCTTATCCTGTAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp ACATCTAAGAAAAGCAGGCTGCGATACAACAAGCATTTGTTAAGAAAAGCTCAGGAGTCTAGGCTTGGTTaGTCATCATCAGCCAAGACG +
Preference number: 4 (lower is better)
Translates to: TSKKSRLRYNKHLLRKAQESRLG*SSSAKT
Trigger: CGTCTTGGCTGATGATGACCAACCAAGCCTAGACTC...CTGAGCTTTTCTTAACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
ENST00000478679.5
CDS-3UTR CCA 90 bp TTTGTTGTTACTGAACTAGCCTATACAGAACCGTCTGTGTCCTCCCAAAACGCATGGATTCATCAGTCATaGTTTGATCGTCTCCATTCG +
Preference number: 4 (lower is better)
Translates to: FVVTELAYTEPSVSSQNAWIHQS*FDRLHS
Trigger: CGAATGGAGACGATCAAACCATGACTGATGAATCCA...TGCGTTTTGGGAGGACACAGACGGTTCTGTATAGGCTAGTTCAGTAACAACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp GAAATTGGTCTGAGTGAGGCCAGTGAAAACTCCTTACAACAAATCCCAGGAAAATCTCCTCCATGGTTCTaGCACTTAGATCACAAACCT +
Preference number: 4 (lower is better)
Translates to: EIGLSEASENSLQQIPGKSPPWF*HLDHKP
Trigger: AGGTTTGTGATCTAAGTGCCAGAACCATGGAGGAGA...TTTTCCTGGGATTTGTTGTAAGGAGTTTTCACTGGCCTCACTCAGACCAATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp CCTCTACTACAGTCCAGTAGTCTACACTTGCAGAGGCTGAATGCTTCAGCTTTCTGTGGTTTTATACTATaGGGTTGCTGTAAATGGAGT +
Preference number: 4 (lower is better)
Translates to: PLLQSSSLHLQRLNASAFCGFIL*GCCKWS
Trigger: ACTCCATTTACAGCAACCCCATAGTATAAAACCACA...GAAAGCTGAAGCATTCAGCCTCTGCAAGTGTAGACTACTGGACTGTAGTAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp TTAAGCCTCCACAAAGTACAATGGGAAATATCAGGAACACTCTCAAAAGTTGTTGGTTTGGCGAAGGAGTaGGCAGTGGGGAAGAAAGAA +
Preference number: 4 (lower is better)
Translates to: LSLHKVQWEISGTLSKVVGLAKE*AVGKKE
Trigger: TTCTTTCTTCCCCACTGCCCACTCCTTCGCCAAACC...AACAACTTTTGAGAGTGTTCCTGATATTTCCCATTGTACTTTGTGGAGGCTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp GGATTTGATGCTACAACTGAATGCAACAGGTCACATTCAGTGCTTTTTGAAGCAAGTGTGCAAAGACTGTaGTCCAAGGGAGTCAAAAGA +
Preference number: 4 (lower is better)
Translates to: GFDATTECNRSHSVLFEASVQRL*SKGVKR
Trigger: TCTTTTGACTCCCTTGGATCACAGTCTTTGCACACT...TGCTTCAAAAAGCACTGAATGTGACCTGTTGCATTCAGTTGTAGCATCAAATCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp GTGTATTTTGTTGTTACTGAACTAGCCTATACAGAACCGTCTGTGTCCTCCCAAGCTCTTACTACCAGTTaGTTGTTGCTATTATCGGTC +
Preference number: 4 (lower is better)
Translates to: VYFVVTELAYTEPSVSSQALTTS*LLLLSV
Trigger: GACCGATAATAGCAACAATCAACTGGTAGTAAGAGC...TTGGGAGGACACAGACGGTTCTGTATAGGCTAGTTCAGTAACAACAAAATACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp GAAATTGGTCTGAGTGAGGCCAGTGAAAACTCCTTACAACAAATCCCAGGAAAAGCTCTTACTACCAGTTaGTTGTTGCTATTATCGGTC +
Preference number: 4 (lower is better)
Translates to: EIGLSEASENSLQQIPGKALTTS*LLLLSV
Trigger: GACCGATAATAGCAACAATCAACTGGTAGTAAGAGC...TTTTCCTGGGATTTGTTGTAAGGAGTTTTCACTGGCCTCACTCAGACCAATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp TTAAGCCTCCACAAAGTACAATGGGAAATATCAGGAACACTCTCAAAAGTTGTTTTCACTGCAGAAGGGTaGTTGGCACAATACGTGAGG +
Preference number: 4 (lower is better)
Translates to: LSLHKVQWEISGTLSKVVFTAEG*LAQYVR
Trigger: CCTCACGTATTGTGCCAATCACCCTTCTGCAGTGAA...AACAACTTTTGAGAGTGTTCCTGATATTTCCCATTGTACTTTGTGGAGGCTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp ACGGTGAAACAGACACAGTTATATACAACAGGGCAGGTTTTTAAAAAGAGTTGCCTCTTCCGGACTTCTTaGCATTGGGCTGAAAGGTTT +
Preference number: 4 (lower is better)
Translates to: TVKQTQLYTTGQVFKKSCLFRTS*HWAERF
Trigger: AAACCTTTCAGCCCAATGTCAAGAAGTCCGGAAGAG...GCAACTCTTTTTAAAAACCTGCCCTGTTGTATATAACTGTGTCTGTTTCACCGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp ACATCTAAGAAAAGCAGGCTGCGATACAACAAGCATTTGTTAAGAAAAGCTCAGCTCTTCCGGACTTCTTaGCATTGGGCTGAAAGGTTT +
Preference number: 4 (lower is better)
Translates to: TSKKSRLRYNKHLLRKAQLFRTS*HWAERF
Trigger: AAACCTTTCAGCCCAATGTCAAGAAGTCCGGAAGAG...CTGAGCTTTTCTTAACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
ENST00000478679.5
CDS-3UTR TCA 90 bp ACATCTAAGAAAAGCAGGCTGCGATACAACAAGCATTTGTTAAGAAAAGCTCAGTCATCAGCCAAGACGTaGTTATGCATCAGGTCAGTG +
Preference number: 4 (lower is better)
Translates to: TSKKSRLRYNKHLLRKAQSSAKT*LCIRSV
Trigger: CACTGACCTGATGCATAATCACGTCTTGGCTGATGA...CTGAGCTTTTCTTAACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
ENST00000478679.5
CDS-3UTR TCA 90 bp TTTGTTGTTACTGAACTAGCCTATACAGAACCGTCTGTGTCCTCCCAAAACGCACTTTTAGTCAGTCACTaGACTTATTGCAGAATGAGG +
Preference number: 4 (lower is better)
Translates to: FVVTELAYTEPSVSSQNALLVSH*TYCRMR
Trigger: CCTCATTCTGCAATAAGTTCAGTGACTGACTAAAAG...TGCGTTTTGGGAGGACACAGACGGTTCTGTATAGGCTAGTTCAGTAACAACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp AAAACAGTGTATTTTGTTGTTACTGAACTAGCCTATACAGAACCGTCTGTGTCCTTGCTTGTGCCCGCATaGGTGAATGATCTGCTAAGT +
Preference number: 4 (lower is better)
Translates to: KTVYFVVTELAYTEPSVSLLVPA*VNDLLS
Trigger: ACTTAGCAGATCATTCACTCATGCGGGCACAAGCAA...GGACACAGACGGTTCTGTATAGGCTAGTTCAGTAACAACAAAATACACTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp TTTGTTGTTACTGAACTAGCCTATACAGAACCGTCTGTGTCCTCCCAAAACGCACCAATAAACTCAAGTTaGATGGTTTCCCACTGCAAT +
Preference number: 4 (lower is better)
Translates to: FVVTELAYTEPSVSSQNAPINSS*MVSHCN
Trigger: ATTGCAGTGGGAAACCATTCAACTTGAGTTTATTGG...TGCGTTTTGGGAGGACACAGACGGTTCTGTATAGGCTAGTTCAGTAACAACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp AGGGGAAGGGCTGTTAAAAACACAAGTATTCTTGTGAAATACTTCGATCTGAGCTGGGAGGTCACACGGTaGAACAGACACAGTTATATA +
Preference number: 4 (lower is better)
Translates to: RGRAVKNTSILVKYFDLSWEVTR*NRHSYI
Trigger: TATATAACTGTGTCTGTTTCACCGTGTGACCTCCCA...GCTCAGATCGAAGTATTTCACAAGAATACTTGTGTTTTTAACAGCCCTTCCCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp ACGGTGAAACAGACACAGTTATATACAACAGGGCAGGTTTTTAAAAAGAGTTGCCTCATCCATACAAGGTaGGAGCAAAGGAGTAACCCT +
Preference number: 4 (lower is better)
Translates to: TVKQTQLYTTGQVFKKSCLIHTR*EQRSNP
Trigger: AGGGTTACTCCTTTGCTCTCACCTTGTATGGATGAG...GCAACTCTTTTTAAAAACCTGCCCTGTTGTATATAACTGTGTCTGTTTCACCGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp ACGGTGAAACAGACACAGTTATATACAACAGGGCAGGTTTTTAAAAAGAGTTGCGAAGGAACGAGCTTCTaGTGCTACATTCCAACATCG +
Preference number: 4 (lower is better)
Translates to: TVKQTQLYTTGQVFKKSCEGTSF*CYIPTS
Trigger: CGATGTTGGAATGTAGCATCAGAAGCTCGTTCCTTC...GCAACTCTTTTTAAAAACCTGCCCTGTTGTATATAACTGTGTCTGTTTCACCGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp TTAAGCCTCCACAAAGTACAATGGGAAATATCAGGAACACTCTCAAAAGTTGTTCTTGCAAGCCGGTCATaGCGGAACAGAAATGATGGT +
Preference number: 4 (lower is better)
Translates to: LSLHKVQWEISGTLSKVVLASRS*RNRNDG
Trigger: ACCATCATTTCTGTTCCGTCATGACCGGCTTGCAAG...AACAACTTTTGAGAGTGTTCCTGATATTTCCCATTGTACTTTGTGGAGGCTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317133.9
CDS-3UTR TCA 90 bp TTGATGCTACAACTGAATGCAACAGGTCACATTCAGTGCTTTTTGAAGCAGAAAATGCGAGTGAACATCTaGGCCATGACAGTAAGCTCT +
Preference number: 4 (lower is better)
Translates to: LMLQLNATGHIQCFLKQKMRVNI*AMTVSS
Trigger: AGAGCTTACTGTCATGGCTCAGATGTTCACTCGCAT...TTTCTGCTTCAAAAAGCACTGAATGTGACCTGTTGCATTCAGTTGTAGCATCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp TTGATGCTACAACTGAATGCAACAGGTCACATTCAGTGCTTTTTGAAGCAGAAATTTGCAAAGGCCTGGTaGTGGCTTAAACCTACCTTC +
Preference number: 4 (lower is better)
Translates to: LMLQLNATGHIQCFLKQKFAKAW*WLKPTF
Trigger: GAAGGTAGGTTTAAGCCATCACCAGGCCTTTGCAAA...TTTCTGCTTCAAAAAGCACTGAATGTGACCTGTTGCATTCAGTTGTAGCATCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp AAAGGAAACCAAAAGCAAAGTCCCTGTGGTCACCCTTATTTATTGCTGAAGCAGCTGATACAAATCATTTaGATCAAACGTCTCCAGCCG +
Preference number: 4 (lower is better)
Translates to: KGNQKQSPCGHPYLLLKQLIQII*IKRLQP
Trigger: CGGCTGGAGACGTTTGATGCAAATGATTTGTATCAG...CTGCTTCAGCAATAAATAAGGGTGACCACAGGGACTTTGCTTTTGGTTTCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218789.9
ENST00000375736.8
CDS-3UTR GCA 90 bp GCTTGTTCCATGCTGAATGAAGCCACCCAACTTTCTAAACAACGTGCTACTGCCCTGGAAGTTAAACTTTaGTCTTACTACCAGTTGATT +
Preference number: 4 (lower is better)
Translates to: ACSMLNEATQLSKQRATALEVKL*SYYQLI
Trigger: AATCAACTGGTAGTAAGAGCAAAGTTTAACTTCCAG...GGCAGTAGCACGTTGTTTAGAAAGTTGGGTGGCTTCATTCAGCATGGAACAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp ATAGTCAGTCATTCGAATGTATACTCGCATCGGCAGTTAAGCCTCCACAAAGTATCGTCCTCATTGGTCTaGTGGAAGTTAAACTTTGCT +
Preference number: 4 (lower is better)
Translates to: IVSHSNVYSHRQLSLHKVSSSLV*WKLNFA
Trigger: AGCAAAGTTTAACTTCCAGCAGACCAATGAGGACGA...TACTTTGTGGAGGCTTAACTGCCGATGCGAGTATACATTCGAATGACTGACTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp AAAACAGTGTATTTTGTTGTTACTGAACTAGCCTATACAGAACCGTCTGTGTCCAACTTCTCACTGGTCTaGAATGGCCGTAGGTACGTT +
Preference number: 4 (lower is better)
Translates to: KTVYFVVTELAYTEPSVSNFSLV*NGRRYV
Trigger: AACGTACCTACGGCCATTGCAGACCAGTGAGAAGTT...GGACACAGACGGTTCTGTATAGGCTAGTTCAGTAACAACAAAATACACTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp ACATCTAAGAAAAGCAGGCTGCGATACAACAAGCATTTGTTAAGAAAAGCTCAGAACTTCTCACTGGTCTaGAATGGCCGTAGGTACGTT +
Preference number: 4 (lower is better)
Translates to: TSKKSRLRYNKHLLRKAQNFSLV*NGRRYV
Trigger: AACGTACCTACGGCCATTGCAGACCAGTGAGAAGTT...CTGAGCTTTTCTTAACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
ENST00000478679.5
CDS-3UTR GCA 90 bp GTGTATTTTGTTGTTACTGAACTAGCCTATACAGAACCGTCTGTGTCCTCCCAACTTCGGGCAACTTGGTaGATTCTTCTAAAGACTGTA +
Preference number: 4 (lower is better)
Translates to: VYFVVTELAYTEPSVSSQLRATW*ILLKTV
Trigger: TACAGTCTTTAGAAGAATGCACCAAGTTGCCCGAAG...TTGGGAGGACACAGACGGTTCTGTATAGGCTAGTTCAGTAACAACAAAATACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp TTGATGCTACAACTGAATGCAACAGGTCACATTCAGTGCTTTTTGAAGCAGAAAGATCCTGCTGGTTGTTaGACGACACTAATATCCGCT +
Preference number: 4 (lower is better)
Translates to: LMLQLNATGHIQCFLKQKDPAGC*TTLISA
Trigger: AGCGGATATTAGTGTCGTGCAACAACCAGCAGGATC...TTTCTGCTTCAAAAAGCACTGAATGTGACCTGTTGCATTCAGTTGTAGCATCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp ACATCTAAGAAAAGCAGGCTGCGATACAACAAGCATTTGTTAAGAAAAGCTCAGGATCCTGCTGGTTGTTaGACGACACTAATATCCGCT +
Preference number: 4 (lower is better)
Translates to: TSKKSRLRYNKHLLRKAQDPAGC*TTLISA
Trigger: AGCGGATATTAGTGTCGTGCAACAACCAGCAGGATC...CTGAGCTTTTCTTAACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
ENST00000478679.5
CDS-3UTR GCA 90 bp TTAAGCCTCCACAAAGTACAATGGGAAATATCAGGAACACTCTCAAAAGTTGTTGTTTGCTTCTGTAGGTaGTCCACCCATTCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: LSLHKVQWEISGTLSKVVVCFCR*STHSCR
Trigger: TCTGCAGGAATGGGTGGAGCACCTACAGAAGCAAAC...AACAACTTTTGAGAGTGTTCCTGATATTTCCCATTGTACTTTGTGGAGGCTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp GAAATTGGTCTGAGTGAGGCCAGTGAAAACTCCTTACAACAAATCCCAGGAAAAATCAGGTCAGTGCCTTaGCATGTTGAATTGAGTGTT +
Preference number: 4 (lower is better)
Translates to: EIGLSEASENSLQQIPGKIRSVP*HVELSV
Trigger: AACACTCAATTCAACATGGCAAGGCACTGACCTGAT...TTTTCCTGGGATTTGTTGTAAGGAGTTTTCACTGGCCTCACTCAGACCAATTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp ACGGTGAAACAGACACAGTTATATACAACAGGGCAGGTTTTTAAAAAGAGTTGCCAGACGCATTTTTCCTaGTCCCTAAAAAGCCGAGGA +
Preference number: 4 (lower is better)
Translates to: TVKQTQLYTTGQVFKKSCQTHFS*SLKSRG
Trigger: TCCTCGGCTTTTTAGGGAGCAGGAAAAATGCGTCTG...GCAACTCTTTTTAAAAACCTGCCCTGTTGTATATAACTGTGTCTGTTTCACCGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp GAAATTGGTCTGAGTGAGGCCAGTGAAAACTCCTTACAACAAATCCCAGGAAAAACACCAAATAGAGCGTaGATGGGACAGAACACAATT +
Preference number: 4 (lower is better)
Translates to: EIGLSEASENSLQQIPGKTPNRA*MGQNTI
Trigger: AATTGTGTTCTGTCCCATGCACGCTCTATTTGGTGT...TTTTCCTGGGATTTGTTGTAAGGAGTTTTCACTGGCCTCACTCAGACCAATTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp CCTCTACTACAGTCCAGTAGTCTACACTTGCAGAGGCTGAATGCTTCAGCTTTCAAACAAACACTTCATTaGCATATGCAACCACAAACA +
Preference number: 4 (lower is better)
Translates to: PLLQSSSLHLQRLNASAFKQTLH*HMQPQT
Trigger: TGTTTGTGGTTGCATATGGCAATGAAGTGTTTGTTT...GAAAGCTGAAGCATTCAGCCTCTGCAAGTGTAGACTACTGGACTGTAGTAGAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp GGATTTGATGCTACAACTGAATGCAACAGGTCACATTCAGTGCTTTTTGAAGCATCCAAACTCCGATACTaGCCCTGGAACAGTTTTGAA +
Preference number: 4 (lower is better)
Translates to: GFDATTECNRSHSVLFEASKLRY*PWNSFE
Trigger: TTCAAAACTGTTCCAGGGCCAGTATCGGAGTTTGGA...TGCTTCAAAAAGCACTGAATGTGACCTGTTGCATTCAGTTGTAGCATCAAATCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp CCTGCTACAACAGCAAACTCCAATAAACTCAAGTTGAATGGTTTCCCACTGCAATGTCATTCCTGTCGTTaGAAGCTTTCCCTGATAGAT +
Preference number: 4 (lower is better)
Translates to: PATTANSNKLKLNGFPLQCHSCR*KLSLID
Trigger: ATCTATCAGGGAAAGCTTCCAACGACAGGAATGACA...TTGCAGTGGGAAACCATTCAACTTGAGTTTATTGGAGTTTGCTGTTGTAGCAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp ATAGTCAGTCATTCGAATGTATACTCGCATCGGCAGTTAAGCCTCCACAAAGTATGTCATTCCTGTCGTTaGAAGCTTTCCCTGATAGAT +
Preference number: 4 (lower is better)
Translates to: IVSHSNVYSHRQLSLHKVCHSCR*KLSLID
Trigger: ATCTATCAGGGAAAGCTTCCAACGACAGGAATGACA...TACTTTGTGGAGGCTTAACTGCCGATGCGAGTATACATTCGAATGACTGACTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp ACATCTAAGAAAAGCAGGCTGCGATACAACAAGCATTTGTTAAGAAAAGCTCAGTCCTGCAGATCCTGCTaGTTGTTGCACGACACTAAT +
Preference number: 4 (lower is better)
Translates to: TSKKSRLRYNKHLLRKAQSCRSC*LLHDTN
Trigger: ATTAGTGTCGTGCAACAACCAGCAGGATCTGCAGGA...CTGAGCTTTTCTTAACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
ENST00000478679.5
CDS-3UTR CCA 90 bp ACATCTAAGAAAAGCAGGCTGCGATACAACAAGCATTTGTTAAGAAAAGCTCAGGTGTTTGCCTTGTTTTaGCGCTGGTGCAGTAAGCTT +
Preference number: 4 (lower is better)
Translates to: TSKKSRLRYNKHLLRKAQVFALF*RWCSKL
Trigger: AAGCTTACTGCACCAGCGCCAAAACAAGGCAAACAC...CTGAGCTTTTCTTAACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
ENST00000478679.5
CDS-3UTR CCA 90 bp CCTGCTACAACAGCAAACTCCAATAAACTCAAGTTGAATGGTTTCCCACTGCAATCAATCCCTCCTGTCTaGATTCATCAGTCATGGTTT +
Preference number: 4 (lower is better)
Translates to: PATTANSNKLKLNGFPLQSIPPV*IHQSWF
Trigger: AAACCATGACTGATGAATCCAGACAGGAGGGATTGA...TTGCAGTGGGAAACCATTCAACTTGAGTTTATTGGAGTTTGCTGTTGTAGCAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp AAAACAGTGTATTTTGTTGTTACTGAACTAGCCTATACAGAACCGTCTGTGTCCAAGGACATTCTAGCATaGGGATTAGCCCGGACAGAA +
Preference number: 4 (lower is better)
Translates to: KTVYFVVTELAYTEPSVSKDILA*GLARTE
Trigger: TTCTGTCCGGGCTAATCCCCATGCTAGAATGTCCTT...GGACACAGACGGTTCTGTATAGGCTAGTTCAGTAACAACAAAATACACTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp ACGGTGAAACAGACACAGTTATATACAACAGGGCAGGTTTTTAAAAAGAGTTGCAGTGTGCAAAGACTGTaGTCCAAGGGAGTCAAAAGA +
Preference number: 4 (lower is better)
Translates to: TVKQTQLYTTGQVFKKSCSVQRL*SKGVKR
Trigger: TCTTTTGACTCCCTTGGATCACAGTCTTTGCACACT...GCAACTCTTTTTAAAAACCTGCCCTGTTGTATATAACTGTGTCTGTTTCACCGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp ACATCTAAGAAAAGCAGGCTGCGATACAACAAGCATTTGTTAAGAAAAGCTCAGAGTGTGCAAAGACTGTaGTCCAAGGGAGTCAAAAGA +
Preference number: 4 (lower is better)
Translates to: TSKKSRLRYNKHLLRKAQSVQRL*SKGVKR
Trigger: TCTTTTGACTCCCTTGGATCACAGTCTTTGCACACT...CTGAGCTTTTCTTAACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAGATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp ATCTACAGGATAAGAAATGGCTTCATCTCCTCATCCATACAAGGTGAGAGCAAAGCTCTTACTACCAGTTaGTTGTTGCTATTATCGGTC +
Preference number: 4 (lower is better)
Translates to: IYRIRNGFISSSIQGESKALTTS*LLLLSV
Trigger: GACCGATAATAGCAACAATCAACTGGTAGTAAGAGC...TTTGCTCTCACCTTGTATGGATGAGGAGATGAAGCCATTTCTTATCCTGTAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp TTGATGCTACAACTGAATGCAACAGGTCACATTCAGTGCTTTTTGAAGCAGAAAGATTGGCACAATACGTaGGGTACAGGGTTTTCATCT +
Preference number: 4 (lower is better)
Translates to: LMLQLNATGHIQCFLKQKDWHNT*GTGFSS
Trigger: AGATGAAAACCCTGTACCTCACGTATTGTGCCAATC...TTTCTGCTTCAAAAAGCACTGAATGTGACCTGTTGCATTCAGTTGTAGCATCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp ACATCTAAGAAAAGCAGGCTGCGATACAACAAGCATTTGTTAAGAAAAGCTCAGGATTGGCACAATACGTaGGGTACAGGGTTTTCATCT +
Preference number: 4 (lower is better)
Translates to: TSKKSRLRYNKHLLRKAQDWHNT*GTGFSS
Trigger: AGATGAAAACCCTGTACCTCACGTATTGTGCCAATC...CTGAGCTTTTCTTAACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAGATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
ENST00000478679.5
CDS-3UTR TCA 90 bp ACATCTAAGAAAAGCAGGCTGCGATACAACAAGCATTTGTTAAGAAAAGCTCAGGGGCTGAAAGGTTTTTaGAGGCAGCCATGGATTTTT +
Preference number: 4 (lower is better)
Translates to: TSKKSRLRYNKHLLRKAQGLKGF*RQPWIF
Trigger: AAAAATCCATGGCTGCCTTCAAAAACCTTTCAGCCC...CTGAGCTTTTCTTAACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAGATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
ENST00000478679.5
CDS-3UTR TCA 90 bp ACATCTAAGAAAAGCAGGCTGCGATACAACAAGCATTTGTTAAGAAAAGCTCAGTTCTTGACATTGGGCTaGAAGGTTTTTGAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: TSKKSRLRYNKHLLRKAQFLTLG*KVFEGS
Trigger: GCTGCCTTCAAAAACCTTTCAGCCCAATGTCAAGAA...CTGAGCTTTTCTTAACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAGATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
ENST00000478679.5
CDS-3UTR TCA 90 bp GAAATTGGTCTGAGTGAGGCCAGTGAAAACTCCTTACAACAAATCCCAGGAAAAATGACTTTCAGAATCTaGGCATCTTCTTCCAAAGCA +
Preference number: 4 (lower is better)
Translates to: EIGLSEASENSLQQIPGKMTFRI*ASSSKA
Trigger: TGCTTTGGAAGAAGATGCTCAGATTCTGAAAGTCAT...TTTTCCTGGGATTTGTTGTAAGGAGTTTTCACTGGCCTCACTCAGACCAATTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp GAAATTGGTCTGAGTGAGGCCAGTGAAAACTCCTTACAACAAATCCCAGGAAAATGCAGTAAGCTTCAATaGCTTTCAGAATCTGAGCAT +
Preference number: 4 (lower is better)
Translates to: EIGLSEASENSLQQIPGKCSKLQ*LSESEH
Trigger: ATGCTCAGATTCTGAAAGTCATTGAAGCTTACTGCA...TTTTCCTGGGATTTGTTGTAAGGAGTTTTCACTGGCCTCACTCAGACCAATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp ACATCTAAGAAAAGCAGGCTGCGATACAACAAGCATTTGTTAAGAAAAGCTCAGAGTGCCTTGCCATGTTaGATTGAGTGTTTGCCTTGT +
Preference number: 4 (lower is better)
Translates to: TSKKSRLRYNKHLLRKAQSALPC*IECLPC
Trigger: ACAAGGCAAACACTCAATTCAACATGGCAAGGCACT...CTGAGCTTTTCTTAACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAGATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
ENST00000478679.5
CDS-3UTR TCA 90 bp AGGGGAAGGGCTGTTAAAAACACAAGTATTCTTGTGAAATACTTCGATCTGAGCACCCTTATTTATTGCTaGAGCAGAACGAAAACCTGC +
Preference number: 4 (lower is better)
Translates to: RGRAVKNTSILVKYFDLSTLIYC*SRTKTC
Trigger: GCAGGTTTTCGTTCTGCTTCAGCAATAAATAAGGGT...GCTCAGATCGAAGTATTTCACAAGAATACTTGTGTTTTTAACAGCCCTTCCCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp ACATCTAAGAAAAGCAGGCTGCGATACAACAAGCATTTGTTAAGAAAAGCTCAGCTGGTGAGAGATATATaGGCAACAGCTCTTACGAGA +
Preference number: 4 (lower is better)
Translates to: TSKKSRLRYNKHLLRKAQLVRDI*ATALTR
Trigger: TCTCGTAAGAGCTGTTGCTCATATATCTCTCACCAG...CTGAGCTTTTCTTAACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAGATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
ENST00000478679.5
CDS-3UTR TCA 90 bp ACATCTAAGAAAAGCAGGCTGCGATACAACAAGCATTTGTTAAGAAAAGCTCAGAAGCAGAAATTGGTCTaGGTGAGGCCAGTGAAAACT +
Preference number: 4 (lower is better)
Translates to: TSKKSRLRYNKHLLRKAQKQKLV*VRPVKT
Trigger: AGTTTTCACTGGCCTCACTCAGACCAATTTCTGCTT...CTGAGCTTTTCTTAACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAGATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp TTGGAAAACAATTCACTACTGCACGAAGAGGGCCAAAGATCTGCAGAGAAATGTATCTGCAGAGAAATGTaGAGCAAGTGTTTTGCACTT +
Preference number: 4 (lower is better)
Translates to: LENNSLLHEEGQRSAEKCICREM*SKCFAL
Trigger: AAGTGCAAAACACTTGCTTCACATTTCTCTGCAGAT...ACATTTCTCTGCAGATCTTTGGCCCTCTTCGTGCAGTAGTGAATTGTTTTCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544132.2
CDS-3UTR GCA 90 bp AAAACAGTGTATTTTGTTGTTACTGAACTAGCCTATACAGAACCGTCTGTGTCCTTTGAAGTCCGAGTGTaGAAAGACTGTGATCCAAGG +
Preference number: 4 (lower is better)
Translates to: KTVYFVVTELAYTEPSVSFEVRV*KDCDPR
Trigger: CCTTGGATCACAGTCTTTGCACACTCGGACTTCAAA...GGACACAGACGGTTCTGTATAGGCTAGTTCAGTAACAACAAAATACACTGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp ACATCTAAGAAAAGCAGGCTGCGATACAACAAGCATTTGTTAAGAAAAGCTCAGTTTGAAGTCCGAGTGTaGAAAGACTGTGATCCAAGG +
Preference number: 4 (lower is better)
Translates to: TSKKSRLRYNKHLLRKAQFEVRV*KDCDPR
Trigger: CCTTGGATCACAGTCTTTGCACACTCGGACTTCAAA...CTGAGCTTTTCTTAACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAGATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp GGATTTGATGCTACAACTGAATGCAACAGGTCACATTCAGTGCTTTTTGAAGCATCGTCCTCATTGGTCTaGTGGAAGTTAAACTTTGCT +
Preference number: 4 (lower is better)
Translates to: GFDATTECNRSHSVLFEASSSLV*WKLNFA
Trigger: AGCAAAGTTTAACTTCCAGCAGACCAATGAGGACGA...TGCTTCAAAAAGCACTGAATGTGACCTGTTGCATTCAGTTGTAGCATCAAATCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp GGATTTGATGCTACAACTGAATGCAACAGGTCACATTCAGTGCTTTTTGAAGCACTTCGGGCAACTTGGTaGATTCTTCTAAAGACTGTA +
Preference number: 4 (lower is better)
Translates to: GFDATTECNRSHSVLFEALRATW*ILLKTV
Trigger: TACAGTCTTTAGAAGAATGCACCAAGTTGCCCGAAG...TGCTTCAAAAAGCACTGAATGTGACCTGTTGCATTCAGTTGTAGCATCAAATCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp CAAAGGAGTAACCCTCGGGCAAATCGTGGCCCCTTTAAACGTTTATATCAAGTTATATCCGCTCAATCATaGTCCCTGATATTTCAAATG +
Preference number: 4 (lower is better)
Translates to: QRSNPRANRGPFKRLYQVISAQS*SLIFQM
Trigger: CATTTGAAATATCAGGGAGCATGATTGAGCGGATAT...AACTTGATATAAACGTTTAAAGGGGCCACGATTTGCCCGAGGGTTACTCCTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp ACATCTAAGAAAAGCAGGCTGCGATACAACAAGCATTTGTTAAGAAAAGCTCAGGTTGAATTGAGTGTTTaGCTTGTTTTGGCGCTGGTG +
Preference number: 4 (lower is better)
Translates to: TSKKSRLRYNKHLLRKAQVELSV*LVLALV
Trigger: CACCAGCGCCAAAACAAGGCAAACACTCAATTCAAC...CTGAGCTTTTCTTAACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAGATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
ENST00000478679.5
CDS-3UTR GCA 90 bp CCTGCTACAACAGCAAACTCCAATAAACTCAAGTTGAATGGTTTCCCACTGCAAAACGTTCCCTGCTTATaGCTATGTTACTTAGTGGAA +
Preference number: 4 (lower is better)
Translates to: PATTANSNKLKLNGFPLQNVPCL*LCYLVE
Trigger: TTCCACTAAGTAACATAGGCATAAGCAGGGAACGTT...TTGCAGTGGGAAACCATTCAACTTGAGTTTATTGGAGTTTGCTGTTGTAGCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp GAAATTGGTCTGAGTGAGGCCAGTGAAAACTCCTTACAACAAATCCCAGGAAAACTAAGAAAAGCAGGCTaGGATACAACAAGCATTTGT +
Preference number: 4 (lower is better)
Translates to: EIGLSEASENSLQQIPGKLRKAG*DTTSIC
Trigger: ACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAG...TTTTCCTGGGATTTGTTGTAAGGAGTTTTCACTGGCCTCACTCAGACCAATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp GAAATTGGTCTGAGTGAGGCCAGTGAAAACTCCTTACAACAAATCCCAGGAAAATCACAGCACCTTTGCTaGATATATTCTTCTCATCTC +
Preference number: 4 (lower is better)
Translates to: EIGLSEASENSLQQIPGKSQHLC*IYSSHL
Trigger: GAGATGAGAAGAATATATGCAGCAAAGGTGCTGTGA...TTTTCCTGGGATTTGTTGTAAGGAGTTTTCACTGGCCTCACTCAGACCAATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp ATAGTCAGTCATTCGAATGTATACTCGCATCGGCAGTTAAGCCTCCACAAAGTATCACAGCACCTTTGCTaGATATATTCTTCTCATCTC +
Preference number: 4 (lower is better)
Translates to: IVSHSNVYSHRQLSLHKVSQHLC*IYSSHL
Trigger: GAGATGAGAAGAATATATGCAGCAAAGGTGCTGTGA...TACTTTGTGGAGGCTTAACTGCCGATGCGAGTATACATTCGAATGACTGACTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp ATAGTCAGTCATTCGAATGTATACTCGCATCGGCAGTTAAGCCTCCACAAAGTACATCAGAGTTCACTCTaGACAAACAAGATCAGAACA +
Preference number: 4 (lower is better)
Translates to: IVSHSNVYSHRQLSLHKVHQSSL*TNKIRT
Trigger: TGTTCTGATCTTGTTTGTGCAGAGTGAACTCTGATG...TACTTTGTGGAGGCTTAACTGCCGATGCGAGTATACATTCGAATGACTGACTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp TTTGTTGTTACTGAACTAGCCTATACAGAACCGTCTGTGTCCTCCCAAAACGCACTGATACAAATCATTTaGATCAAACGTACGAGAGCA +
Preference number: 4 (lower is better)
Translates to: FVVTELAYTEPSVSSQNALIQII*IKRTRA
Trigger: TGCTCTCGTACGTTTGATGCAAATGATTTGTATCAG...TGCGTTTTGGGAGGACACAGACGGTTCTGTATAGGCTAGTTCAGTAACAACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426073.6
CDS-3UTR CCA 90 bp AAAGGAAACCAAAAGCAAAGTCCCTGTGGTCACCCTTATTTATTGCTGAAGCAGTCCTCATTGGTCTGCTaGAAGTTAAACTTTGCTCTT +
Preference number: 4 (lower is better)
Translates to: KGNQKQSPCGHPYLLLKQSSLVC*KLNFAL
Trigger: AAGAGCAAAGTTTAACTTCCAGCAGACCAATGAGGA...CTGCTTCAGCAATAAATAAGGGTGACCACAGGGACTTTGCTTTTGGTTTCCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp AAAACAGTGTATTTTGTTGTTACTGAACTAGCCTATACAGAACCGTCTGTGTCCAACTTAACTTCTCACTaGTCTGCAATGGCCGTAGGT +
Preference number: 4 (lower is better)
Translates to: KTVYFVVTELAYTEPSVSNLTSH*SAMAVG
Trigger: ACCTACGGCCATTGCAGACCAGTGAGAAGTTAAGTT...GGACACAGACGGTTCTGTATAGGCTAGTTCAGTAACAACAAAATACACTGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp ACGGTGAAACAGACACAGTTATATACAACAGGGCAGGTTTTTAAAAAGAGTTGCAACTTAACTTCTCACTaGTCTGCAATGGCCGTAGGT +
Preference number: 4 (lower is better)
Translates to: TVKQTQLYTTGQVFKKSCNLTSH*SAMAVG
Trigger: ACCTACGGCCATTGCAGACCAGTGAGAAGTTAAGTT...GCAACTCTTTTTAAAAACCTGCCCTGTTGTATATAACTGTGTCTGTTTCACCGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp ACATCTAAGAAAAGCAGGCTGCGATACAACAAGCATTTGTTAAGAAAAGCTCAGAACTTAACTTCTCACTaGTCTGCAATGGCCGTAGGT +
Preference number: 4 (lower is better)
Translates to: TSKKSRLRYNKHLLRKAQNLTSH*SAMAVG
Trigger: ACCTACGGCCATTGCAGACCAGTGAGAAGTTAAGTT...CTGAGCTTTTCTTAACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAGATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
ENST00000478679.5
CDS-3UTR CCA 90 bp ACATCTAAGAAAAGCAGGCTGCGATACAACAAGCATTTGTTAAGAAAAGCTCAGGAGCTTCGGGCAACTTaGTGCATTCTTCTAAAGACT +
Preference number: 4 (lower is better)
Translates to: TSKKSRLRYNKHLLRKAQELRAT*CILLKT
Trigger: AGTCTTTAGAAGAATGCACCAAGTTGCCCGAAGCTC...CTGAGCTTTTCTTAACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAGATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
ENST00000478679.5
CDS-3UTR CCA 90 bp AAAACAGTGTATTTTGTTGTTACTGAACTAGCCTATACAGAACCGTCTGTGTCCGAGATGTTCACAGAGTaGATTGATGTAGCTCAGGTC +
Preference number: 4 (lower is better)
Translates to: KTVYFVVTELAYTEPSVSEMFTE*IDVAQV
Trigger: GACCTGAGCTACATCAATCCACTCTGTGAACATCTC...GGACACAGACGGTTCTGTATAGGCTAGTTCAGTAACAACAAAATACACTGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp ATAGTCAGTCATTCGAATGTATACTCGCATCGGCAGTTAAGCCTCCACAAAGTACTCCACAAAGTACAATaGGAAATATCAGGAACACTC +
Preference number: 4 (lower is better)
Translates to: IVSHSNVYSHRQLSLHKVLHKVQ*EISGTL
Trigger: GAGTGTTCCTGATATTTCCCATTGTACTTTGTGGAG...TACTTTGTGGAGGCTTAACTGCCGATGCGAGTATACATTCGAATGACTGACTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp TTAAGCCTCCACAAAGTACAATGGGAAATATCAGGAACACTCTCAAAAGTTGTTAGTAAGCTCTGCCTTTaGAAAGGAGAGCTCCCACTT +
Preference number: 4 (lower is better)
Translates to: LSLHKVQWEISGTLSKVVSKLCL*KGELPL
Trigger: AAGTGGGAGCTCTCCTTTCCAAAGGCAGAGCTTACT...AACAACTTTTGAGAGTGTTCCTGATATTTCCCATTGTACTTTGTGGAGGCTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp TTGATGCTACAACTGAATGCAACAGGTCACATTCAGTGCTTTTTGAAGCAGAAACAAATAGAGCGTGCATaGGACAGAACACAATTTGGC +
Preference number: 4 (lower is better)
Translates to: LMLQLNATGHIQCFLKQKQIERA*DRTQFG
Trigger: GCCAAATTGTGTTCTGTCCCATGCACGCTCTATTTG...TTTCTGCTTCAAAAAGCACTGAATGTGACCTGTTGCATTCAGTTGTAGCATCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp ACATCTAAGAAAAGCAGGCTGCGATACAACAAGCATTTGTTAAGAAAAGCTCAGCAAATAGAGCGTGCATaGGACAGAACACAATTTGGC +
Preference number: 4 (lower is better)
Translates to: TSKKSRLRYNKHLLRKAQQIERA*DRTQFG
Trigger: GCCAAATTGTGTTCTGTCCCATGCACGCTCTATTTG...CTGAGCTTTTCTTAACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAGATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp CCATTAGCTTGTTCCATGCTGAATGAAGCCACCCAACTTTCTAAACAACGTGCTATCCCATTTACTATCTaGCTGAACATACATAAACCC +
Preference number: 4 (lower is better)
Translates to: PLACSMLNEATQLSKQRAIPFTI*LNIHKP
Trigger: GGGTTTATGTATGTTCAGCCAGATAGTAAATGGGAT...AGCACGTTGTTTAGAAAGTTGGGTGGCTTCATTCAGCATGGAACAAGCTAATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp AGGGGAAGGGCTGTTAAAAACACAAGTATTCTTGTGAAATACTTCGATCTGAGCTGCAGTAAGCTTCAATaGCTTTCAGAATCTGAGCAT +
Preference number: 4 (lower is better)
Translates to: RGRAVKNTSILVKYFDLSCSKLQ*LSESEH
Trigger: ATGCTCAGATTCTGAAAGTCATTGAAGCTTACTGCA...GCTCAGATCGAAGTATTTCACAAGAATACTTGTGTTTTTAACAGCCCTTCCCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp ATCTACAGGATAAGAAATGGCTTCATCTCCTCATCCATACAAGGTGAGAGCAAACTTTTAGTCAGTCACTaGACTTATTGCAGAATGAGG +
Preference number: 4 (lower is better)
Translates to: IYRIRNGFISSSIQGESKLLVSH*TYCRMR
Trigger: CCTCATTCTGCAATAAGTTCAGTGACTGACTAAAAG...TTTGCTCTCACCTTGTATGGATGAGGAGATGAAGCCATTTCTTATCCTGTAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp AGGGGAAGGGCTGTTAAAAACACAAGTATTCTTGTGAAATACTTCGATCTGAGCCCAATAAACTCAAGTTaGATGGTTTCCCACTGCAAT +
Preference number: 4 (lower is better)
Translates to: RGRAVKNTSILVKYFDLSPINSS*MVSHCN
Trigger: ATTGCAGTGGGAAACCATTCAACTTGAGTTTATTGG...GCTCAGATCGAAGTATTTCACAAGAATACTTGTGTTTTTAACAGCCCTTCCCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp ATCTACAGGATAAGAAATGGCTTCATCTCCTCATCCATACAAGGTGAGAGCAAAAGAGAAGTGAAGAAATaGTTGGCATTAAGGAGTCCA +
Preference number: 4 (lower is better)
Translates to: IYRIRNGFISSSIQGESKREVKK*LALRSP
Trigger: TGGACTCCTTAATGCCAATCATTTCTTCACTTCTCT...TTTGCTCTCACCTTGTATGGATGAGGAGATGAAGCCATTTCTTATCCTGTAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp TTAAGCCTCCACAAAGTACAATGGGAAATATCAGGAACACTCTCAAAAGTTGTTATTAACACTGGGCTCTaGCTGCTCCTCAATGTTCTT +
Preference number: 4 (lower is better)
Translates to: LSLHKVQWEISGTLSKVVINTGL*LLLNVL
Trigger: AAGAACATTGAGGAGCAGTCAGAGCCCAGTGTTAAT...AACAACTTTTGAGAGTGTTCCTGATATTTCCCATTGTACTTTGTGGAGGCTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp ACATCTAAGAAAAGCAGGCTGCGATACAACAAGCATTTGTTAAGAAAAGCTCAGCTTCGGGCAACTTGGTaGATTCTTCTAAAGACTGTA +
Preference number: 4 (lower is better)
Translates to: TSKKSRLRYNKHLLRKAQLRATW*ILLKTV
Trigger: TACAGTCTTTAGAAGAATGCACCAAGTTGCCCGAAG...CTGAGCTTTTCTTAACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAGATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
ENST00000478679.5
CDS-3UTR GCA 90 bp TTGGAAAACAATTCACTACTGCACGAAGAGGGCCAAAGATCTGCAGAGAAATGTATATCCGCTCAATCATaGTCCCTGATATTTCAAATG +
Preference number: 4 (lower is better)
Translates to: LENNSLLHEEGQRSAEKCISAQS*SLIFQM
Trigger: CATTTGAAATATCAGGGAGCATGATTGAGCGGATAT...ACATTTCTCTGCAGATCTTTGGCCCTCTTCGTGCAGTAGTGAATTGTTTTCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544132.2
CDS-3UTR GCA 90 bp ACATCTAAGAAAAGCAGGCTGCGATACAACAAGCATTTGTTAAGAAAAGCTCAGATCAGGTCAGTGCCTTaGCATGTTGAATTGAGTGTT +
Preference number: 4 (lower is better)
Translates to: TSKKSRLRYNKHLLRKAQIRSVP*HVELSV
Trigger: AACACTCAATTCAACATGGCAAGGCACTGACCTGAT...CTGAGCTTTTCTTAACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAGATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
ENST00000478679.5
CDS-3UTR GCA 90 bp AGGGGAAGGGCTGTTAAAAACACAAGTATTCTTGTGAAATACTTCGATCTGAGCAACGTTCCCTGCTTATaGCTATGTTACTTAGTGGAA +
Preference number: 4 (lower is better)
Translates to: RGRAVKNTSILVKYFDLSNVPCL*LCYLVE
Trigger: TTCCACTAAGTAACATAGGCATAAGCAGGGAACGTT...GCTCAGATCGAAGTATTTCACAAGAATACTTGTGTTTTTAACAGCCCTTCCCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp ATAGTCAGTCATTCGAATGTATACTCGCATCGGCAGTTAAGCCTCCACAAAGTATACAGGCTTGCTATGTaGCTTATAACAGAAATCACT +
Preference number: 4 (lower is better)
Translates to: IVSHSNVYSHRQLSLHKVYRLAM*LITEIT
Trigger: AGTGATTTCTGTTATAAGGCACATAGCAAGCCTGTA...TACTTTGTGGAGGCTTAACTGCCGATGCGAGTATACATTCGAATGACTGACTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp CCATTAGCTTGTTCCATGCTGAATGAAGCCACCCAACTTTCTAAACAACGTGCTTTTATACTATGGGGTTaGTGTAAATGGAGTTTCACT +
Preference number: 4 (lower is better)
Translates to: PLACSMLNEATQLSKQRAFILWG*CKWSFT
Trigger: AGTGAAACTCCATTTACAGCAACCCCATAGTATAAA...AGCACGTTGTTTAGAAAGTTGGGTGGCTTCATTCAGCATGGAACAAGCTAATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp TTGATGCTACAACTGAATGCAACAGGTCACATTCAGTGCTTTTTGAAGCAGAAATGTCATTCCTGTCGTTaGAAGCTTTCCCTGATAGAT +
Preference number: 4 (lower is better)
Translates to: LMLQLNATGHIQCFLKQKCHSCR*KLSLID
Trigger: ATCTATCAGGGAAAGCTTCCAACGACAGGAATGACA...TTTCTGCTTCAAAAAGCACTGAATGTGACCTGTTGCATTCAGTTGTAGCATCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp ACATCTAAGAAAAGCAGGCTGCGATACAACAAGCATTTGTTAAGAAAAGCTCAGTGTCATTCCTGTCGTTaGAAGCTTTCCCTGATAGAT +
Preference number: 4 (lower is better)
Translates to: TSKKSRLRYNKHLLRKAQCHSCR*KLSLID
Trigger: ATCTATCAGGGAAAGCTTCCAACGACAGGAATGACA...CTGAGCTTTTCTTAACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAGATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
ENST00000478679.5
CDS-3UTR CCA 90 bp ATCTACAGGATAAGAAATGGCTTCATCTCCTCATCCATACAAGGTGAGAGCAAATCTTATTCACGTAGCTaGAAAGGACATTCTAGCATG +
Preference number: 4 (lower is better)
Translates to: IYRIRNGFISSSIQGESKSYSRS*KGHSSM
Trigger: CATGCTAGAATGTCCTTTCCAGCTACGTGAATAAGA...TTTGCTCTCACCTTGTATGGATGAGGAGATGAAGCCATTTCTTATCCTGTAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp TTAAGCCTCCACAAAGTACAATGGGAAATATCAGGAACACTCTCAAAAGTTGTTTCTCCTCCATGGTTCTaGCACTTAGATCACAAACCT +
Preference number: 4 (lower is better)
Translates to: LSLHKVQWEISGTLSKVVSPPWF*HLDHKP
Trigger: AGGTTTGTGATCTAAGTGCCAGAACCATGGAGGAGA...AACAACTTTTGAGAGTGTTCCTGATATTTCCCATTGTACTTTGTGGAGGCTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR CAA 72 bp TACTTAGTGGAACCTAAGGTGTATATTGCTTTATTCTaGCTGAAGGAGGGGATTTTACTTTCGGTGAGCACT +
Preference number: 4 (lower is better)
Translates to: YLVEPKVYIALF*LKEGILLSVST
Trigger: AGTGCTCACCGAAAGTAAAATCCCCTCCTTCAGCAAGAATAAAGCAATATACACCTTAGGTTCCACTAAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
CDS-3UTR TCA 90 bp TTGATGCTACAACTGAATGCAACAGGTCACATTCAGTGCTTTTTGAAGCAGAAAATGACTTTCAGAATCTaGGCATCTTCTTCCAAAGCA +
Preference number: 4 (lower is better)
Translates to: LMLQLNATGHIQCFLKQKMTFRI*ASSSKA
Trigger: TGCTTTGGAAGAAGATGCTCAGATTCTGAAAGTCAT...TTTCTGCTTCAAAAAGCACTGAATGTGACCTGTTGCATTCAGTTGTAGCATCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp ACATCTAAGAAAAGCAGGCTGCGATACAACAAGCATTTGTTAAGAAAAGCTCAGATGACTTTCAGAATCTaGGCATCTTCTTCCAAAGCA +
Preference number: 4 (lower is better)
Translates to: TSKKSRLRYNKHLLRKAQMTFRI*ASSSKA
Trigger: TGCTTTGGAAGAAGATGCTCAGATTCTGAAAGTCAT...CTGAGCTTTTCTTAACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAGATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
ENST00000478679.5
CDS-3UTR TCA 90 bp ACATCTAAGAAAAGCAGGCTGCGATACAACAAGCATTTGTTAAGAAAAGCTCAGTGCAGTAAGCTTCAATaGCTTTCAGAATCTGAGCAT +
Preference number: 4 (lower is better)
Translates to: TSKKSRLRYNKHLLRKAQCSKLQ*LSESEH
Trigger: ATGCTCAGATTCTGAAAGTCATTGAAGCTTACTGCA...CTGAGCTTTTCTTAACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAGATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
ENST00000478679.5
CDS-3UTR TCA 90 bp AAAACAGTGTATTTTGTTGTTACTGAACTAGCCTATACAGAACCGTCTGTGTCCTGCAGTAAGCTTCAATaGCTTTCAGAATCTGAGCAT +
Preference number: 4 (lower is better)
Translates to: KTVYFVVTELAYTEPSVSCSKLQ*LSESEH
Trigger: ATGCTCAGATTCTGAAAGTCATTGAAGCTTACTGCA...GGACACAGACGGTTCTGTATAGGCTAGTTCAGTAACAACAAAATACACTGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp ACGGTGAAACAGACACAGTTATATACAACAGGGCAGGTTTTTAAAAAGAGTTGCAACATCGCTGAAAACTaGAAGTGCTTCACATCTACA +
Preference number: 4 (lower is better)
Translates to: TVKQTQLYTTGQVFKKSCNIAEN*KCFTST
Trigger: TGTAGATGTGAAGCACTTTCAGTTTTCAGCGATGTT...GCAACTCTTTTTAAAAACCTGCCCTGTTGTATATAACTGTGTCTGTTTCACCGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR TCA 90 bp AAAACAGTGTATTTTGTTGTTACTGAACTAGCCTATACAGAACCGTCTGTGTCCAGAGAAGTGAAGAAATaGTTGGCATTAAGGAGTCCA +
Preference number: 4 (lower is better)
Translates to: KTVYFVVTELAYTEPSVSREVKK*LALRSP
Trigger: TGGACTCCTTAATGCCAATCATTTCTTCACTTCTCT...GGACACAGACGGTTCTGTATAGGCTAGTTCAGTAACAACAAAATACACTGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp ACATCTAAGAAAAGCAGGCTGCGATACAACAAGCATTTGTTAAGAAAAGCTCAGCTACCAGTTGATTGTTaGTATTATCGGTCATGTCCA +
Preference number: 4 (lower is better)
Translates to: TSKKSRLRYNKHLLRKAQLPVDC*YYRSCP
Trigger: TGGACATGACCGATAATAGCAACAATCAACTGGTAG...CTGAGCTTTTCTTAACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAGATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp TTGATGCTACAACTGAATGCAACAGGTCACATTCAGTGCTTTTTGAAGCAGAAACTACCAGTTGATTGTTaGTATTATCGGTCATGTCCA +
Preference number: 4 (lower is better)
Translates to: LMLQLNATGHIQCFLKQKLPVDC*YYRSCP
Trigger: TGGACATGACCGATAATAGCAACAATCAACTGGTAG...TTTCTGCTTCAAAAAGCACTGAATGTGACCTGTTGCATTCAGTTGTAGCATCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp GTGTATTTTGTTGTTACTGAACTAGCCTATACAGAACCGTCTGTGTCCTCCCAACTGGAAGTTAAACTTTaGTCTTACTACCAGTTGATT +
Preference number: 4 (lower is better)
Translates to: VYFVVTELAYTEPSVSSQLEVKL*SYYQLI
Trigger: AATCAACTGGTAGTAAGAGCAAAGTTTAACTTCCAG...TTGGGAGGACACAGACGGTTCTGTATAGGCTAGTTCAGTAACAACAAAATACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp ACATCTAAGAAAAGCAGGCTGCGATACAACAAGCATTTGTTAAGAAAAGCTCAGCTAAGAAAAGCAGGCTaGGATACAACAAGCATTTGT +
Preference number: 4 (lower is better)
Translates to: TSKKSRLRYNKHLLRKAQLRKAG*DTTSIC
Trigger: ACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAG...CTGAGCTTTTCTTAACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAGATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
ENST00000478679.5
CDS-3UTR GCA 90 bp ACATCTAAGAAAAGCAGGCTGCGATACAACAAGCATTTGTTAAGAAAAGCTCAGCATCAGAGTTCACTCTaGACAAACAAGATCAGAACA +
Preference number: 4 (lower is better)
Translates to: TSKKSRLRYNKHLLRKAQHQSSL*TNKIRT
Trigger: TGTTCTGATCTTGTTTGTGCAGAGTGAACTCTGATG...CTGAGCTTTTCTTAACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAGATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp ACATCTAAGAAAAGCAGGCTGCGATACAACAAGCATTTGTTAAGAAAAGCTCAGGTCAGGTTATTCTTCTaGAGTGATCTTAGCATCAAG +
Preference number: 4 (lower is better)
Translates to: TSKKSRLRYNKHLLRKAQVRLFF*SDLSIK
Trigger: CTTGATGCTAAGATCACTGCAGAAGAATAACCTGAC...CTGAGCTTTTCTTAACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAGATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp ACGGTGAAACAGACACAGTTATATACAACAGGGCAGGTTTTTAAAAAGAGTTGCTCCTCATTGGTCTGCTaGAAGTTAAACTTTGCTCTT +
Preference number: 4 (lower is better)
Translates to: TVKQTQLYTTGQVFKKSCSSLVC*KLNFAL
Trigger: AAGAGCAAAGTTTAACTTCCAGCAGACCAATGAGGA...GCAACTCTTTTTAAAAACCTGCCCTGTTGTATATAACTGTGTCTGTTTCACCGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp AAAACAGTGTATTTTGTTGTTACTGAACTAGCCTATACAGAACCGTCTGTGTCCCTACAGGATAAGAAATaGCTTCATCTCCTCATCCAT +
Preference number: 4 (lower is better)
Translates to: KTVYFVVTELAYTEPSVSLQDKK*LHLLIH
Trigger: ATGGATGAGGAGATGAAGCCATTTCTTATCCTGTAG...GGACACAGACGGTTCTGTATAGGCTAGTTCAGTAACAACAAAATACACTGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CCA 90 bp ACATCTAAGAAAAGCAGGCTGCGATACAACAAGCATTTGTTAAGAAAAGCTCAGGAGTTTCACTGCAGCTaGTTGCTGAAAATAATGATG +
Preference number: 4 (lower is better)
Translates to: TSKKSRLRYNKHLLRKAQEFHCS*LLKIMM
Trigger: CATCATTATTTTCAGCAACCAGCTGCAGTGAAACTC...CTGAGCTTTTCTTAACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAGATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp TTGATGCTACAACTGAATGCAACAGGTCACATTCAGTGCTTTTTGAAGCAGAAAGAGTTTCACTGCAGCTaGTTGCTGAAAATAATGATG +
Preference number: 4 (lower is better)
Translates to: LMLQLNATGHIQCFLKQKEFHCS*LLKIMM
Trigger: CATCATTATTTTCAGCAACCAGCTGCAGTGAAACTC...TTTCTGCTTCAAAAAGCACTGAATGTGACCTGTTGCATTCAGTTGTAGCATCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR TCA 90 bp ACGGTGAAACAGACACAGTTATATACAACAGGGCAGGTTTTTAAAAAGAGTTGCTTGCTTTATTCTTGCTaGAGGAGGGGATTTTACTTT +
Preference number: 4 (lower is better)
Translates to: TVKQTQLYTTGQVFKKSCLLYSC*RRGFYF
Trigger: AAAGTAAAATCCCCTCCTTCAGCAAGAATAAAGCAA...GCAACTCTTTTTAAAAACCTGCCCTGTTGTATATAACTGTGTCTGTTTCACCGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR GCA 90 bp TTAAGCCTCCACAAAGTACAATGGGAAATATCAGGAACACTCTCAAAAGTTGTTCTACCAGTTGATTGTTaGTATTATCGGTCATGTCCA +
Preference number: 4 (lower is better)
Translates to: LSLHKVQWEISGTLSKVVLPVDC*YYRSCP
Trigger: TGGACATGACCGATAATAGCAACAATCAACTGGTAG...AACAACTTTTGAGAGTGTTCCTGATATTTCCCATTGTACTTTGTGGAGGCTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp ACATCTAAGAAAAGCAGGCTGCGATACAACAAGCATTTGTTAAGAAAAGCTCAGATATCCGCTCAATCATaGTCCCTGATATTTCAAATG +
Preference number: 4 (lower is better)
Translates to: TSKKSRLRYNKHLLRKAQISAQS*SLIFQM
Trigger: CATTTGAAATATCAGGGAGCATGATTGAGCGGATAT...CTGAGCTTTTCTTAACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAGATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
ENST00000478679.5
CDS-3UTR GCA 90 bp TTAAGCCTCCACAAAGTACAATGGGAAATATCAGGAACACTCTCAAAAGTTGTTCTAAGAAAAGCAGGCTaGGATACAACAAGCATTTGT +
Preference number: 4 (lower is better)
Translates to: LSLHKVQWEISGTLSKVVLRKAG*DTTSIC
Trigger: ACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAG...AACAACTTTTGAGAGTGTTCCTGATATTTCCCATTGTACTTTGTGGAGGCTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp ACATCTAAGAAAAGCAGGCTGCGATACAACAAGCATTTGTTAAGAAAAGCTCAGTATAACAGAAATCACTaGAATTCAGGGAAGTTTGGG +
Preference number: 4 (lower is better)
Translates to: TSKKSRLRYNKHLLRKAQYNRNH*NSGKFG
Trigger: CCCAAACTTCCCTGAATTGCAGTGATTTCTGTTATA...CTGAGCTTTTCTTAACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAGATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CCA 90 bp ACATCTAAGAAAAGCAGGCTGCGATACAACAAGCATTTGTTAAGAAAAGCTCAGTGTGGTTTTATACTATaGGGTTGCTGTAAATGGAGT +
Preference number: 4 (lower is better)
Translates to: TSKKSRLRYNKHLLRKAQCGFIL*GCCKWS
Trigger: ACTCCATTTACAGCAACCCCATAGTATAAAACCACA...CTGAGCTTTTCTTAACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAGATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
3UTR CAA 72 bp TGTAGCATCAACATTGTAGTAGTCAACACTAGGACATaGTCTGTGACATTTAAATTAGGAGTTTCTCCACAC +
Preference number: 4 (lower is better)
Translates to: CSINIVVVNTRT*SVTFKLGVSPH
Trigger: GTGTGGAGAAACTCCTAATTTAAATGTCACAGACAATGTCCTAGTGTTGACTACTACAATGTTGATGCTACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
ENST00000646102.1
CDS-3UTR TCA 90 bp TTAAGCCTCCACAAAGTACAATGGGAAATATCAGGAACACTCTCAAAAGTTGTTATTCTATTATCAGCATaGCTGAAGTCCCACAAAAGT +
Preference number: 4 (lower is better)
Translates to: LSLHKVQWEISGTLSKVVILLSA*LKSHKS
Trigger: ACTTTTGTGGGACTTCAGTCATGCTGATAATAGAAT...AACAACTTTTGAGAGTGTTCCTGATATTTCCCATTGTACTTTGTGGAGGCTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp TTAAGCCTCCACAAAGTACAATGGGAAATATCAGGAACACTCTCAAAAGTTGTTCTGGAAGTTAAACTTTaGTCTTACTACCAGTTGATT +
Preference number: 4 (lower is better)
Translates to: LSLHKVQWEISGTLSKVVLEVKL*SYYQLI
Trigger: AATCAACTGGTAGTAAGAGCAAAGTTTAACTTCCAG...AACAACTTTTGAGAGTGTTCCTGATATTTCCCATTGTACTTTGTGGAGGCTTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR GCA 90 bp TTAAGCCTCCACAAAGTACAATGGGAAATATCAGGAACACTCTCAAAAGTTGTTCTGATACAAATCATTTaGATCAAACGTAGAAGCAGA +
Preference number: 4 (lower is better)
Translates to: LSLHKVQWEISGTLSKVVLIQII*IKRRSR
Trigger: TCTGCTTCTACGTTTGATGCAAATGATTTGTATCAG...AACAACTTTTGAGAGTGTTCCTGATATTTCCCATTGTACTTTGTGGAGGCTTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375741.6
CDS CCA 90 bp CCGAGCGACGCCCACGGCCCGCGCTCCCAACACAGCGGGCGACGCTaGCGAGCGGCCCCCGACGGCCTGGAGCGAGCCCGCTGCCCCAGA +
Preference number: 5 (lower is better)
Translates to: PSDAHGPRSQHSGRR*RAAPDGLERARCPR
Trigger: TCTGGGGCAGCGGGCTCGCTCCAGGCCGTCGGGGGCCGCTCGCCAGCGTCGCCCGCTGTGTTGGGAGCGCGGGCCGTGGGCGTCGCTCGG
80% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000218789.9
ENST00000375736.8
CDS CCA 90 bp GCTCCCAACACAGCGGGCGACGCTGGCGAGCGGCCCCCGACGGCCTaGAGCGAGCCCGCTGCCCCAGATGCCAACCCGCTCAGCCGCTGC +
Preference number: 5 (lower is better)
Translates to: APNTAGDAGERPPTA*SEPAAPDANPLSRC
Trigger: GCAGCGGCTGAGCGGGTTGGCATCTGGGGCAGCGGGCTCGCTCCAGGCCGTCGGGGGCCGCTCGCCAGCGTCGCCCGCTGTGTTGGGAGC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000218789.9
CDS GCA 90 bp GGGCGACGCTGGCGAGCGGCCCCCGACGGCCTGGAGCGAGCCCGCTaGCCCAGATGCCAACCCGCTCAGCCGCTGCTTCTCCTCACCCTT +
Preference number: 5 (lower is better)
Translates to: GRRWRAAPDGLERAR*PRCQPAQPLLLLTL
Trigger: AAGGGTGAGGAGAAGCAGCGGCTGAGCGGGTTGGCATCTGGGGCAGCGGGCTCGCTCCAGGCCGTCGGGGGCCGCTCGCCAGCGTCGCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000218789.9
CDS GCA 90 bp GGGCAGCGTGTGGTAGGCGGGCGTCAGCGGCGCGGGCTTGCTGTCTaGGTGCTTGCTGGACGGAGTGACCGGGTGGGAGGGGAGCTGCCA +
Preference number: 5 (lower is better)
Translates to: GQRVVGGRQRRGLAV*VLAGRSDRVGGELP
Trigger: TGGCAGCTCCCCTCCCACCCGGTCACTCCGTCCAGCAAGCACGCAGACAGCAAGCCCGCGCCGCTGACGCCCGCCTACCACACGCTGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491688.1
CDS CCA 90 bp GGGCCGGGCCGGGCGCCTGGCTGCGTCTCGGGGACGCCGAAGATCTaGGCTGTGAAAGCAGCAGGCCGAACCTGGAGAGCCCAGACGGCA +
Preference number: 5 (lower is better)
Translates to: GPGRAPGCVSGTPKI*AVKAAGRTWRAQTA
Trigger: TGCCGTCTGGGCTCTCCAGGTTCGGCCTGCTGCTTTCACAGCCCAGATCTTCGGCGTCCCCGAGACGCAGCCAGGCGCCCGGCCCGGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483540.1
CDS TCA 90 bp CACCGGCAGGGCAGGGGCCTGCGCGACTCTGCTCTAGACGGACGGTaGCGCTTCAGACCCTGCCGGGGGAAGGTCAAGGAAACGGCGTGG +
Preference number: 5 (lower is better)
Translates to: HRQGRGLRDSALDGR*RFRPCRGKVKETAW
Trigger: CCACGCCGTTTCCTTGACCTTCCCCCGGCAGGGTCTGAAGCGTCACCGTCCGTCTAGAGCAGAGTCGCGCAGGCCCCTGCCCTGCCGGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317133.9
ENST00000483540.1
CDS GCA 90 bp TTGGGCGACTCCAGCACCCCCAGAGTGATGAGCCACGTAACGGTTTaGTCGGCGGAATTCATCGCTGCGGCCCGGGAGGCAGGCGGGGAG +
Preference number: 5 (lower is better)
Translates to: LGDSSTPRVMSHVTV*SAEFIAAAREAGGE
Trigger: CTCCCCGCCTGCCTCCCGGGCCGCAGCGATGAATTCCGCCGAGCAAACCGTTACGTGGCTCATCACTCTGGGGGTGCTGGAGTCGCCCAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317133.9
ENST00000375739.6
ENST00000375741.6
ENST00000422836.2
ENST00000449979.5
ENST00000646102.2
CDS-3UTR CAA 90 bp CGTCAGCGGCGCGGGCTTGCTGTCTGCGTGCTTGCTGGACGGAGTGACCGGGTGAGGAACTCGCGGATGTaGCTCAGGCACTCGCTCTCG +
Preference number: 5 (lower is better)
Translates to: RQRRGLAVCVLAGRSDRVRNSRM*LRHSLS
Trigger: CGAGAGCGAGTGCCTGAGCAACATCCGCGAGTTCCT...CACCCGGTCACTCCGTCCAGCAAGCACGCAGACAGCAAGCCCGCGCCGCTGACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR CAA 90 bp CAGCACGGTGGAGGCCCTGGTGCTGCGGAACGAACCAGGCATCCACCAGGCTTCGGGCTGCTGGCACCTTaGGTCTCCATGAACTCCCCC +
Preference number: 5 (lower is better)
Translates to: QHGGGPGAAERTRHPPGFGLLAP*VSMNSP
Trigger: GGGGGAGTTCATGGAGACCAAAGGTGCCAGCAGCCC...GAAGCCTGGTGGATGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCACCGTGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CAA 90 bp CAGCACGGTGGAGGCCCTGGTGCTGCGGAACGAACCAGGCATCCACCAGGCTTCTTGCTGTCTGCGTGCTaGCTGGACGGAGTGACCGGG +
Preference number: 5 (lower is better)
Translates to: QHGGGPGAAERTRHPPGFLLSAC*LDGVTG
Trigger: CCCGGTCACTCCGTCCAGCAAGCACGCAGACAGCAA...GAAGCCTGGTGGATGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCACCGTGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CAA 90 bp TGTGGTCCTGAGTGCACCCCGACTTGGGTCAGGGGTGCCCAGCTTCACCTCAGAGTCAGCGGCGCGGGCTaGCTGTCTGCGTGCTTGCTG +
Preference number: 5 (lower is better)
Translates to: CGPECTPTWVRGAQLHLRVSGAG*LSACLL
Trigger: CAGCAAGCACGCAGACAGCAAGCCCGCGCCGCTGAC...TCTGAGGTGAAGCTGGGCACCCCTGACCCAAGTCGGGGTGCACTCAGGACCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CAA 90 bp AGAGCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGGTCAGCGGCGCGGGCTaGCTGTCTGCGTGCTTGCTG +
Preference number: 5 (lower is better)
Translates to: RAVRWRQALNTRDARPSVVSGAG*LSACLL
Trigger: CAGCAAGCACGCAGACAGCAAGCCCGCGCCGCTGAC...CACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGCTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS CCA 90 bp GGACCTCAGACCCCGGACTTCCCGGTTCCACCTCCATGCAGTCTCTaGGTGTGCCTCCACCTTCATGAGCACTGCTTTCCGCTCCGCGGC +
Preference number: 5 (lower is better)
Translates to: GPQTPDFPVPPPCSL*VCLHLHEHCFPLRG
Trigger: GCCGCGGAGCGGAAAGCAGTGCTCATGAAGGTGGAGGCACACCCAGAGACTGCATGGAGGTGGAACCGGGAAGTCCGGGGTCTGAGGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR CAA 90 bp CTGGGGACTCGGACAGCAACGCTACCGGCTCCGAGAGGACAGTTAATGTCGCCTGTCAGCGGCGCGGGCTaGCTGTCTGCGTGCTTGCTG +
Preference number: 5 (lower is better)
Translates to: LGTRTATLPAPRGQLMSPVSGAG*LSACLL
Trigger: CAGCAAGCACGCAGACAGCAAGCCCGCGCCGCTGAC...AGGCGACATTAACTGTCCTCTCGGAGCCGGTAGCGTTGCTGTCCGAGTCCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CAA 90 bp AAAACCTGCTCCACGGGCCGGGCTTCCTGCCCAGGACCGCACAGGCTTTCCAGACTCAGGCTCCAGGGCTaGGGTGTTTTCGGAGGCTCC +
Preference number: 5 (lower is better)
Translates to: KTCSTGRASCPGPHRLSRLRLQG*GVFGGS
Trigger: GGAGCCTCCGAAAACACCCAAGCCCTGGAGCCTGAG...TCTGGAAAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGTGGAGCAGGTTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS TCA 90 bp TTCCCCTCCTCGTCTTCTGCACGCTCTGGCTGCTGCAGGACCCCATaGGACCTCACAGCCTGGACGCCACAGCTCCATCCCACCAACGCT +
Preference number: 5 (lower is better)
Translates to: FPSSSSARSGCCRTP*DLTAWTPQLHPTNA
Trigger: AGCGTTGGTGGGATGGAGCTGTGGCGTCCAGGCTGTGAGGTCTCATGGGGTCCTGCAGCAGCCAGAGCGTGCAGAAGACGAGGAGGGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000478679.5
ENST00000483189.1
CDS-3UTR CAA 90 bp TGTGGTCCTGAGTGCACCCCGACTTGGGTCAGGGGTGCCCAGCTTCACCTCAGAAGGCGCATGAAGGGTTaGCTCAGGCCCGTGGTCAGC +
Preference number: 5 (lower is better)
Translates to: CGPECTPTWVRGAQLHLRRRMKG*LRPVVS
Trigger: GCTGACCACGGGCCTGAGCAAACCCTTCATGCGCCT...TCTGAGGTGAAGCTGGGCACCCCTGACCCAAGTCGGGGTGCACTCAGGACCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CAA 90 bp AGAGCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGTTGCTGTCTGCGTGCTaGCTGGACGGAGTGACCGGG +
Preference number: 5 (lower is better)
Translates to: RAVRWRQALNTRDARPSVLLSAC*LDGVTG
Trigger: CCCGGTCACTCCGTCCAGCAAGCACGCAGACAGCAA...CACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGCTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp CAGCACGGTGGAGGCCCTGGTGCTGCGGAACGAACCAGGCATCCACCAGGCTTCGGCTTCCGTTCAGGTTaGCGCTTGGGCAGCAGCTTT +
Preference number: 5 (lower is better)
Translates to: QHGGGPGAAERTRHPPGFGFRSG*RLGSSF
Trigger: AAAGCTGCTGCCCAAGCGCAAACCTGAACGGAAGCC...GAAGCCTGGTGGATGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCACCGTGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS TCA 90 bp GGGAGGGGAGCTGCCAAGGGCACAGAGCGGGAAGGGCAGAGAACATaGGACTCGCGTGCTCACCGCGAAAGGGCACTTATCACGCACTTC +
Preference number: 5 (lower is better)
Translates to: GRGAAKGTEREGQRT*DSRAHRERALITHF
Trigger: GAAGTGCGTGATAAGTGCCCTTTCGCGGTGAGCACGCGAGTCTCATGTTCTCTGCCCTTCCCGCTCTGTGCCCTTGGCAGCTCCCCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491688.1
CDS GCA 90 bp CTGCAGGCAGGACCTCAGACCCCGGACTTCCCGGTTCCACCTCCATaGAGTCTCTGGGTGTGCCTCCACCTTCATGAGCACTGCTTTCCG +
Preference number: 5 (lower is better)
Translates to: LQAGPQTPDFPVPPP*SLWVCLHLHEHCFP
Trigger: CGGAAAGCAGTGCTCATGAAGGTGGAGGCACACCCAGAGACTGCATGGAGGTGGAACCGGGAAGTCCGGGGTCTGAGGTCCTGCCTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR CAA 90 bp TTACGAAGAGCACCCTCGGATGTAGGCTCACGTGAACACACCACCTCCCTCCAACAGCCGGTCCGGCCGTaGAGTGTGCCCTCCCACCAG +
Preference number: 5 (lower is better)
Translates to: LRRAPSDVGSREHTTSLQQPVRP*SVPSHQ
Trigger: CTGGTGGGAGGGCACACTCAACGGCCGGACCGGCTG...TTGGAGGGAGGTGGTGTGTTCACGTGAGCCTACATCCGAGGGTGCTCTTCGTAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp ATCGCCCTCCCAGTTCCGGATGGCTTCCGTCAGGATCTGCAGCTCAAGCTCTTTGTCAGCGGCGCGGGCTaGCTGTCTGCGTGCTTGCTG +
Preference number: 5 (lower is better)
Translates to: IALPVPDGFRQDLQLKLFVSGAG*LSACLL
Trigger: CAGCAAGCACGCAGACAGCAAGCCCGCGCCGCTGAC...AAAGAGCTTGAGCTGCAGATCCTGACGGAAGCCATCCGGAACTGGGAGGGCGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR CAA 90 bp GCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGCACGGCTTCCGTTCAGGTTaGCGCTTGGGCAGCAGCTTT +
Preference number: 5 (lower is better)
Translates to: AVRWRQALNTRDARPSVHGFRSG*RLGSSF
Trigger: AAAGCTGCTGCCCAAGCGCAAACCTGAACGGAAGCC...GTGCACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS GCA 90 bp CTCTGGCTCCCAAATGTGTCTGCTGGCAGGCATGCCTTTCAACCCTaGAGGCAGGACCTCAGACCCCGGACTTCCCGGTTCCACCTCCAT +
Preference number: 5 (lower is better)
Translates to: LWLPNVSAGRHAFQP*RQDLRPRTSRFHLH
Trigger: ATGGAGGTGGAACCGGGAAGTCCGGGGTCTGAGGTCCTGCCTGCAGGGTTGAAAGGCATGCCTGCCAGCAGACACATTTGGGAGCCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR CAA 90 bp CTGGGGACTCGGACAGCAACGCTACCGGCTCCGAGAGGACAGTTAATGTCGCCTAGGAACTCGCGGATGTaGCTCAGGCACTCGCTCTCG +
Preference number: 5 (lower is better)
Translates to: LGTRTATLPAPRGQLMSPRNSRM*LRHSLS
Trigger: CGAGAGCGAGTGCCTGAGCAACATCCGCGAGTTCCT...AGGCGACATTAACTGTCCTCTCGGAGCCGGTAGCGTTGCTGTCCGAGTCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218789.9
ENST00000375736.8
CDS-3UTR CAA 90 bp AGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAAGTCAGCGGCGCGGGCTaGCTGTCTGCGTGCTTGCTG +
Preference number: 5 (lower is better)
Translates to: RPRAHMLFCTITRTQPLEVSGAG*LSACLL
Trigger: CAGCAAGCACGCAGACAGCAAGCCCGCGCCGCTGAC...TTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp TTACGAAGAGCACCCTCGGATGTAGGCTCACGTGAACACACCACCTCCCTCCAAGTCAGCGGCGCGGGCTaGCTGTCTGCGTGCTTGCTG +
Preference number: 5 (lower is better)
Translates to: LRRAPSDVGSREHTTSLQVSGAG*LSACLL
Trigger: CAGCAAGCACGCAGACAGCAAGCCCGCGCCGCTGAC...TTGGAGGGAGGTGGTGTGTTCACGTGAGCCTACATCCGAGGGTGCTCTTCGTAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp CTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGCTCAGGCTCCAGGGCTaGGGTGTTTTCGGAGGCTCC +
Preference number: 5 (lower is better)
Translates to: LPRPRAHMLFCTITRTQPLRLQG*GVFGGS
Trigger: GGAGCCTCCGAAAACACCCAAGCCCTGGAGCCTGAG...CGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp AACGAAAACCTGCTCCACGGGCCGGGCTTCCTGCCCAGGACCGCACAGGCTTTCAGCTTCTCCAGGTCTTaGCGGGCTCTCTGTTCTTCC +
Preference number: 5 (lower is better)
Translates to: NENLLHGPGFLPRTAQAFSFSRS*RALCSS
Trigger: GGAAGAACAGAGAGCCCGCAAAGACCTGGAGAAGCT...GAAAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGTGGAGCAGGTTTTCGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CAA 90 bp AACGAAAACCTGCTCCACGGGCCGGGCTTCCTGCCCAGGACCGCACAGGCTTTCCCGTATGGGCCTTCCTaGAGGTCAAGACTGAGTCTG +
Preference number: 5 (lower is better)
Translates to: NENLLHGPGFLPRTAQAFPYGPS*RSRLSL
Trigger: CAGACTCAGTCTTGACCTCAAGGAAGGCCCATACGG...GAAAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGTGGAGCAGGTTTTCGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS CCA 90 bp TTCTGTAGCACCACCTTTCTTCCCCTCCTCGTCTTCTGCACGCTCTaGCTGCTGCAGGACCCCATGAGACCTCACAGCCTGGACGCCACA +
Preference number: 5 (lower is better)
Translates to: FCSTTFLPLLVFCTL*LLQDPMRPHSLDAT
Trigger: TGTGGCGTCCAGGCTGTGAGGTCTCATGGGGTCCTGCAGCAGCCAGAGCGTGCAGAAGACGAGGAGGGGAAGAAAGGTGGTGCTACAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000478679.5
ENST00000483189.1
CDS-3UTR CAA 90 bp GTGGGGAAGAAAGAAATCACGGCCACCTGGAATTACAGCCACCCTGAAGAAGGACAGCCGGTCCGGCCGTaGAGTGTGCCCTCCCACCAG +
Preference number: 5 (lower is better)
Translates to: VGKKEITATWNYSHPEEGQPVRP*SVPSHQ
Trigger: CTGGTGGGAGGGCACACTCAACGGCCGGACCGGCTG...TCCTTCTTCAGGGTGGCTGTAATTCCAGGTGGCCGTGATTTCTTTCTTCCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp GGACATGTAAGTGACGTTGCCCAGAGTTTTAATGTCATCGCCCTCCCAGTTCCGCAGCCGGTCCGGCCGTaGAGTGTGCCCTCCCACCAG +
Preference number: 5 (lower is better)
Translates to: GHVSDVAQSFNVIALPVPQPVRP*SVPSHQ
Trigger: CTGGTGGGAGGGCACACTCAACGGCCGGACCGGCTG...CGGAACTGGGAGGGCGATGACATTAAAACTCTGGGCAACGTCACTTACATGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR CAA 90 bp ACCTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCGGGCTGCTGGCACCTTaGGTCTCCATGAACTCCCCC +
Preference number: 5 (lower is better)
Translates to: TCQGPEPTCCSARLPEHSGLLAP*VSMNSP
Trigger: GGGGGAGTTCATGGAGACCAAAGGTGCCAGCAGCCC...GCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp CAGCACGGTGGAGGCCCTGGTGCTGCGGAACGAACCAGGCATCCACCAGGCTTCGACATCCCTTATAGATaGGTCTCATCCCAGGCAGGA +
Preference number: 5 (lower is better)
Translates to: QHGGGPGAAERTRHPPGFDIPYR*VSSQAG
Trigger: TCCTGCCTGGGATGAGACCAATCTATAAGGGATGTC...GAAGCCTGGTGGATGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCACCGTGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CAA 90 bp CTGGGGACTCGGACAGCAACGCTACCGGCTCCGAGAGGACAGTTAATGTCGCCTGGAGTTTCTCCACACTaGTCAACAGGCGCCCTGGGT +
Preference number: 5 (lower is better)
Translates to: LGTRTATLPAPRGQLMSPGVSPH*STGALG
Trigger: ACCCAGGGCGCCTGTTGACAAGTGTGGAGAAACTCC...AGGCGACATTAACTGTCCTCTCGGAGCCGGTAGCGTTGCTGTCCGAGTCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CAA 90 bp AGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAAGGGCTGCTGGCACCTTaGGTCTCCATGAACTCCCCC +
Preference number: 5 (lower is better)
Translates to: RPRAHMLFCTITRTQPLEGLLAP*VSMNSP
Trigger: GGGGGAGTTCATGGAGACCAAAGGTGCCAGCAGCCC...TTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp CAGCACGGTGGAGGCCCTGGTGCTGCGGAACGAACCAGGCATCCACCAGGCTTCTGCAGATCCTGCTGGTaGTTGCACGACACTAATATC +
Preference number: 5 (lower is better)
Translates to: QHGGGPGAAERTRHPPGFCRSCW*LHDTNI
Trigger: GATATTAGTGTCGTGCAACAACCAGCAGGATCTGCA...GAAGCCTGGTGGATGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCACCGTGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CAA 90 bp GCGGCAGTGCCGTATGGGCCTTCCTTGAGGTCAAGACTGAGTCTGTCAGCCAGCCCGTATGGGCCTTCCTaGAGGTCAAGACTGAGTCTG +
Preference number: 5 (lower is better)
Translates to: AAVPYGPSLRSRLSLSASPYGPS*RSRLSL
Trigger: CAGACTCAGTCTTGACCTCAAGGAAGGCCCATACGG...GCTGGCTGACAGACTCAGTCTTGACCTCAAGGAAGGCCCATACGGCACTGCCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CAA 90 bp AGAGCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGTTTCGCTTTGCTACCTaGCAAGCCGGTCATGACGGA +
Preference number: 5 (lower is better)
Translates to: RAVRWRQALNTRDARPSVFRFAT*QAGHDG
Trigger: TCCGTCATGACCGGCTTGCAAGGTAGCAAAGCGAAA...CACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317133.9
CDS TCA 90 bp GTGTGCAAAGACTGTGATCCAAGGGAGTCAAAAGACTTTATGCGGTaGGACGAGGGCCGGGCACACACGGAGTCACTCCCCAGCCCGATG +
Preference number: 5 (lower is better)
Translates to: VCKDCDPRESKDFMR*DEGRAHTESLPSPM
Trigger: CATCGGGCTGGGGAGTGACTCCGTGTGTGCCCGGCCCTCGTCTCACCGCATAAAGTCTTTTGACTCCCTTGGATCACAGTCTTTGCACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000218789.9
ENST00000317133.9
ENST00000375723.5
ENST00000375736.8
ENST00000375739.6
ENST00000375741.6
ENST00000426073.6
ENST00000426768.2
ENST00000449979.5
ENST00000466143.5
ENST00000467053.5
ENST00000491775.5
ENST00000646102.2
CDS GCA 90 bp TCCGAGTGTGCAAAGACTGTGATCCAAGGGAGTCAAAAGACTTTATaGGGTGAGACGAGGGCCGGGCACACACGGAGTCACTCCCCAGCC +
Preference number: 5 (lower is better)
Translates to: SECAKTVIQGSQKTL*GETRAGHTRSHSPA
Trigger: GGCTGGGGAGTGACTCCGTGTGTGCCCGGCCCTCGTCTCACCGCATAAAGTCTTTTGACTCCCTTGGATCACAGTCTTTGCACACTCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000218789.9
ENST00000317133.9
ENST00000375723.5
ENST00000375736.8
ENST00000375739.6
ENST00000375741.6
ENST00000426073.6
ENST00000426768.2
ENST00000449979.5
ENST00000466143.5
ENST00000467053.5
ENST00000491775.5
ENST00000646102.2
CDS GCA 90 bp TGCCAAGGGCACAGAGCGGGAAGGGCAGAGAACATGAGACTCGCGTaGTCACCGCGAAAGGGCACTTATCACGCACTTCCTTCTGCTCTT +
Preference number: 5 (lower is better)
Translates to: CQGHRAGRAENMRLA*SPRKGTYHALPSAL
Trigger: AAGAGCAGAAGGAAGTGCGTGATAAGTGCCCTTTCGCGGTGAGCACGCGAGTCTCATGTTCTCTGCCCTTCCCGCTCTGTGCCCTTGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491688.1
CDS CCA 90 bp AACACATTCAGACCACAGCACACTCTGGCTCCCAAATGTGTCTGCTaGCAGGCATGCCTTTCAACCCTGCAGGCAGGACCTCAGACCCCG +
Preference number: 5 (lower is better)
Translates to: NTFRPQHTLAPKCVC*QACLSTLQAGPQTP
Trigger: CGGGGTCTGAGGTCCTGCCTGCAGGGTTGAAAGGCATGCCTGCCAGCAGACACATTTGGGAGCCAGAGTGTGCTGTGGTCTGAATGTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR CAA 90 bp AGAACACAGCCGTTGGAACTGGGCTCACAGCACCTTTGCTGCATATATTCTTCTCAGCCGGTCCGGCCGTaGAGTGTGCCCTCCCACCAG +
Preference number: 5 (lower is better)
Translates to: RTQPLELGSQHLCCIYSSQPVRP*SVPSHQ
Trigger: CTGGTGGGAGGGCACACTCAACGGCCGGACCGGCTG...AGAAGAATATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp GCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGCACGTCGTATCAAATCCTTaGGGAGGGCTCTTCAGTGTT +
Preference number: 5 (lower is better)
Translates to: AVRWRQALNTRDARPSVHVVSNP*GGLFSV
Trigger: AACACTGAAGAGCCCTCCCAAAGGATTTGATACGAC...GTGCACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp ACGGTGGAGGCCCTGGTGCTGCGGAACGAACCAGGCATCCACCAGGCTTCTGCTTGTCTCTCGAGCTCTTaGAGCAGCGTAGGGTATTTA +
Preference number: 5 (lower is better)
Translates to: TVEALVLRNEPGIHQASACLSSS*SSVGYL
Trigger: TAAATACCCTACGCTGCTCAAAGAGCTCGAGAGACA...AGCAGAAGCCTGGTGGATGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCACCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CAA 90 bp GCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGCACTGTCTCTCGAGCTCTTaGAGCAGCGTAGGGTATTTA +
Preference number: 5 (lower is better)
Translates to: AVRWRQALNTRDARPSVHCLSSS*SSVGYL
Trigger: TAAATACCCTACGCTGCTCAAAGAGCTCGAGAGACA...GTGCACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp ACCTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCGGCTTCCGTTCAGGTTaGCGCTTGGGCAGCAGCTTT +
Preference number: 5 (lower is better)
Translates to: TCQGPEPTCCSARLPEHSGFRSG*RLGSSF
Trigger: AAAGCTGCTGCCCAAGCGCAAACCTGAACGGAAGCC...GCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp ACCTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCGAGCCACGTAACGGTTaGCTCGGCGGAATTCATCGC +
Preference number: 5 (lower is better)
Translates to: TCQGPEPTCCSARLPEHSEPRNG*LGGIHR
Trigger: GCGATGAATTCCGCCGAGCAAACCGTTACGTGGCTC...GCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317133.9
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp CTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGACTGAATACGTGGGTTaGGCGAAGGAGTGGGCAGTG +
Preference number: 5 (lower is better)
Translates to: LPRPRAHMLFCTITRTQPTEYVG*AKEWAV
Trigger: CACTGCCCACTCCTTCGCCAAACCCACGTATTCAGT...CGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS GCA 90 bp CAGAGTCTTCCGAGAGGTCTGAAGGCTCCAAACGAGAAAGGCTACTaGGACGCCCCAGGGAGTCTAGGCTTGGTTGGTCATCATCAGCCA +
Preference number: 5 (lower is better)
Translates to: QSLPRGLKAPNEKGY*DAPGSLGLVGHHQP
Trigger: TGGCTGATGATGACCAACCAAGCCTAGACTCCCTGGGGCGTCGCAGTAGCCTTTCTCGTTTGGAGCCTTCAGACCTCTCGGAAGACTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000218789.9
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
ENST00000478679.5
ENST00000646102.2
CDS GCA 90 bp GGAAACACATTCAGACCACAGCACACTCTGGCTCCCAAATGTGTCTaGTGGCAGGCATGCCTTTCAACCCTGCAGGCAGGACCTCAGACC +
Preference number: 5 (lower is better)
Translates to: GNTFRPQHTLAPKCV*WQACLSTLQAGPQT
Trigger: GGTCTGAGGTCCTGCCTGCAGGGTTGAAAGGCATGCCTGCCAGCAGACACATTTGGGAGCCAGAGTGTGCTGTGGTCTGAATGTGTTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR CAA 90 bp AACGAAAACCTGCTCCACGGGCCGGGCTTCCTGCCCAGGACCGCACAGGCTTTCCCTGATACAAATCATTaGCATCAAACGTCTCCAGCC +
Preference number: 5 (lower is better)
Translates to: NENLLHGPGFLPRTAQAFPDTNH*HQTSPA
Trigger: GGCTGGAGACGTTTGATGCAAATGATTTGTATCAGG...GAAAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGTGGAGCAGGTTTTCGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218789.9
ENST00000375736.8
CDS-3UTR CAA 90 bp GTGGGGAAGAAAGAAATCACGGCCACCTGGAATTACAGCCACCCTGAAGAAGGAAGGCGCATGAAGGGTTaGCTCAGGCCCGTGGTCAGC +
Preference number: 5 (lower is better)
Translates to: VGKKEITATWNYSHPEEGRRMKG*LRPVVS
Trigger: GCTGACCACGGGCCTGAGCAAACCCTTCATGCGCCT...TCCTTCTTCAGGGTGGCTGTAATTCCAGGTGGCCGTGATTTCTTTCTTCCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp AAACAATGGCCCTCTGGATGCCACATCGCCACTGCCACAGGAGAACTGTCTTTTAGGCGCATGAAGGGTTaGCTCAGGCCCGTGGTCAGC +
Preference number: 5 (lower is better)
Translates to: KQWPSGCHIATATGELSFRRMKG*LRPVVS
Trigger: GCTGACCACGGGCCTGAGCAAACCCTTCATGCGCCT...AAAAGACAGTTCTCCTGTGGCAGTGGCGATGTGGCATCCAGAGGGCCATTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp CCTCTGCACTGGAACACAGTGGGGGAAACGTTCCCTGCTTATGCCTATGTTACTAGGCGCATGAAGGGTTaGCTCAGGCCCGTGGTCAGC +
Preference number: 5 (lower is better)
Translates to: PLHWNTVGETFPAYAYVTRRMKG*LRPVVS
Trigger: GCTGACCACGGGCCTGAGCAAACCCTTCATGCGCCT...AGTAACATAGGCATAAGCAGGGAACGTTTCCCCCACTGTGTTCCAGTGCAGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CAA 90 bp AAAACCTGCTCCACGGGCCGGGCTTCCTGCCCAGGACCGCACAGGCTTTCCAGATTGTCATTCCTGTCGTaGGAAGCTTTCCCTGATAGA +
Preference number: 5 (lower is better)
Translates to: KTCSTGRASCPGPHRLSRLSFLS*EAFPDR
Trigger: TCTATCAGGGAAAGCTTCCAACGACAGGAATGACAA...TCTGGAAAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGTGGAGCAGGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CAA 90 bp AGAGCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGTGCAGATCCTGCTGGTaGTTGCACGACACTAATATC +
Preference number: 5 (lower is better)
Translates to: RAVRWRQALNTRDARPSVCRSCW*LHDTNI
Trigger: GATATTAGTGTCGTGCAACAACCAGCAGGATCTGCA...CACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp CGATTACCAGAACACAGCCGTTGGAACTGGGCTCACAGCACCTTTGCTGCATATTTGCTGTCTGCGTGCTaGCTGGACGGAGTGACCGGG +
Preference number: 5 (lower is better)
Translates to: RLPEHSRWNWAHSTFAAYLLSAC*LDGVTG
Trigger: CCCGGTCACTCCGTCCAGCAAGCACGCAGACAGCAA...ATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp AAACAATGGCCCTCTGGATGCCACATCGCCACTGCCACAGGAGAACTGTCTTTTTTGCTGTCTGCGTGCTaGCTGGACGGAGTGACCGGG +
Preference number: 5 (lower is better)
Translates to: KQWPSGCHIATATGELSFLLSAC*LDGVTG
Trigger: CCCGGTCACTCCGTCCAGCAAGCACGCAGACAGCAA...AAAAGACAGTTCTCCTGTGGCAGTGGCGATGTGGCATCCAGAGGGCCATTGTTT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp CATCTGAGCCATGACAGTAAGCTCTGCCTTTGGAAAGGAGAGCTCCCACTTCACTTGCTGTCTGCGTGCTaGCTGGACGGAGTGACCGGG +
Preference number: 5 (lower is better)
Translates to: HLSHDSKLCLWKGELPLHLLSAC*LDGVTG
Trigger: CCCGGTCACTCCGTCCAGCAAGCACGCAGACAGCAA...GTGAAGTGGGAGCTCTCCTTTCCAAAGGCAGAGCTTACTGTCATGGCTCAGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp AGAACACAGCCGTTGGAACTGGGCTCACAGCACCTTTGCTGCATATATTCTTCTGTCAGCGGCGCGGGCTaGCTGTCTGCGTGCTTGCTG +
Preference number: 5 (lower is better)
Translates to: RTQPLELGSQHLCCIYSSVSGAG*LSACLL
Trigger: CAGCAAGCACGCAGACAGCAAGCCCGCGCCGCTGAC...AGAAGAATATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp TCCCAGAGAAGTGAAGAAATGATTGGCATTAAGGAGTCCACACAACCAGGGCAGGTCAGCGGCGCGGGCTaGCTGTCTGCGTGCTTGCTG +
Preference number: 5 (lower is better)
Translates to: SQRSEEMIGIKESTQPGQVSGAG*LSACLL
Trigger: CAGCAAGCACGCAGACAGCAAGCCCGCGCCGCTGAC...CTGCCCTGGTTGTGTGGACTCCTTAATGCCAATCATTTCTTCACTTCTCTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CAA 90 bp CTGTGGTCACCCTTATTTATTGCTGAAGCAGAACGAAAACCTGCTCCACGGGCCCTCAGGCTCCAGGGCTaGGGTGTTTTCGGAGGCTCC +
Preference number: 5 (lower is better)
Translates to: LWSPLFIAEAERKPAPRALRLQG*GVFGGS
Trigger: GGAGCCTCCGAAAACACCCAAGCCCTGGAGCCTGAG...GGCCCGTGGAGCAGGTTTTCGTTCTGCTTCAGCAATAAATAAGGGTGACCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CAA 90 bp AGAGCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGGGGCTCACAGCACCTTaGCTGCATATATTCTTCTCA +
Preference number: 5 (lower is better)
Translates to: RAVRWRQALNTRDARPSVGLTAP*LHIFFS
Trigger: TGAGAAGAATATATGCAGCAAAGGTGCTGTGAGCCC...CACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp GCGGGCATGGGACTTCTTATTCACGTAGCTGGAAAGGACATTCTAGCATGGGGAAGGAACTCGCGGATGTaGCTCAGGCACTCGCTCTCG +
Preference number: 5 (lower is better)
Translates to: AGMGLLIHVAGKDILAWGRNSRM*LRHSLS
Trigger: CGAGAGCGAGTGCCTGAGCAACATCCGCGAGTTCCT...TCCCCATGCTAGAATGTCCTTTCCAGCTACGTGAATAAGAAGTCCCATGCCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000218789.9
ENST00000375736.8
CDS-3UTR CAA 90 bp TGTGGTCCTGAGTGCACCCCGACTTGGGTCAGGGGTGCCCAGCTTCACCTCAGACCTGATACAAATCATTaGCATCAAACGTCTCCAGCC +
Preference number: 5 (lower is better)
Translates to: CGPECTPTWVRGAQLHLRPDTNH*HQTSPA
Trigger: GGCTGGAGACGTTTGATGCAAATGATTTGTATCAGG...TCTGAGGTGAAGCTGGGCACCCCTGACCCAAGTCGGGGTGCACTCAGGACCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000218789.9
ENST00000375736.8
CDS-3UTR CAA 90 bp CAAAGGAGTAACCCTCGGGCAAATCGTGGCCCCTTTAAACGTTTATATCAAGTTCAGCCGGTCCGGCCGTaGAGTGTGCCCTCCCACCAG +
Preference number: 5 (lower is better)
Translates to: QRSNPRANRGPFKRLYQVQPVRP*SVPSHQ
Trigger: CTGGTGGGAGGGCACACTCAACGGCCGGACCGGCTG...AACTTGATATAAACGTTTAAAGGGGCCACGATTTGCCCGAGGGTTACTCCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CAA 90 bp TTTGTTGTTACTGAACTAGCCTATACAGAACCGTCTGTGTCCTCCCAAAACGCACAGCCGGTCCGGCCGTaGAGTGTGCCCTCCCACCAG +
Preference number: 5 (lower is better)
Translates to: FVVTELAYTEPSVSSQNAQPVRP*SVPSHQ
Trigger: CTGGTGGGAGGGCACACTCAACGGCCGGACCGGCTG...TGCGTTTTGGGAGGACACAGACGGTTCTGTATAGGCTAGTTCAGTAACAACAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CAA 90 bp CAGCACGGTGGAGGCCCTGGTGCTGCGGAACGAACCAGGCATCCACCAGGCTTCGGCAGCCATGGATTTTaGAATATCTTGTCTATCTGT +
Preference number: 5 (lower is better)
Translates to: QHGGGPGAAERTRHPPGFGSHGF*NILSIC
Trigger: ACAGATAGACAAGATATTCAAAAATCCATGGCTGCC...GAAGCCTGGTGGATGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCACCGTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CAA 90 bp ACGCCCAGCGCATGTGGACAAGCACAGACGCCACTGAGTGTGAAGGAACGAGCTAGATCCTGCTGGTTGTaGCACGACACTAATATCCGC +
Preference number: 5 (lower is better)
Translates to: TPSACGQAQTPLSVKERARSCWL*HDTNIR
Trigger: GCGGATATTAGTGTCGTGCAACAACCAGCAGGATCT...AGCTCGTTCCTTCACACTCAGTGGCGTCTGTGCTTGTCCACATGCGCTGGGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CAA 90 bp CTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGAGATCCTGCTGGTTGTaGCACGACACTAATATCCGC +
Preference number: 5 (lower is better)
Translates to: LPRPRAHMLFCTITRTQPRSCWL*HDTNIR
Trigger: GCGGATATTAGTGTCGTGCAACAACCAGCAGGATCT...CGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp ACCTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTCAGGTTTGCGCTaGGGCAGCAGCTTTTTCATG +
Preference number: 5 (lower is better)
Translates to: TCQGPEPTCCSARLPEHSRSGLR*GSSFFM
Trigger: CATGAAAAAGCTGCTGCCCAAGCGCAAACCTGAACG...GCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp ACGGTGGAGGCCCTGGTGCTGCGGAACGAACCAGGCATCCACCAGGCTTCTGCTCCTTGCCATGTTGAATaGAGTGTTTGCCTTGTTTTG +
Preference number: 5 (lower is better)
Translates to: TVEALVLRNEPGIHQASAPCHVE*SVCLVL
Trigger: CAAAACAAGGCAAACACTCAATTCAACATGGCAAGG...AGCAGAAGCCTGGTGGATGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCACCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000218789.9
CDS-3UTR CAA 90 bp TTACGAAGAGCACCCTCGGATGTAGGCTCACGTGAACACACCACCTCCCTCCAACCAGGGAGTCTAGGCTaGGTTGGTCATCATCAGCCA +
Preference number: 5 (lower is better)
Translates to: LRRAPSDVGSREHTTSLQPGSLG*VGHHQP
Trigger: TGGCTGATGATGACCAACCAAGCCTAGACTCCCTGG...TTGGAGGGAGGTGGTGTGTTCACGTGAGCCTACATCCGAGGGTGCTCTTCGTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp AGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAACCAGGGAGTCTAGGCTaGGTTGGTCATCATCAGCCA +
Preference number: 5 (lower is better)
Translates to: RPRAHMLFCTITRTQPLEPGSLG*VGHHQP
Trigger: TGGCTGATGATGACCAACCAAGCCTAGACTCCCTGG...TTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp TGTGGTCCTGAGTGCACCCCGACTTGGGTCAGGGGTGCCCAGCTTCACCTCAGATTCATCAGTCATGGTTaGATCGTCTCCATTCGCAGA +
Preference number: 5 (lower is better)
Translates to: CGPECTPTWVRGAQLHLRFISHG*IVSIRR
Trigger: TCTGCGAATGGAGACGATCAAACCATGACTGATGAA...TCTGAGGTGAAGCTGGGCACCCCTGACCCAAGTCGGGGTGCACTCAGGACCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CAA 90 bp CCTCTGCACTGGAACACAGTGGGGGAAACGTTCCCTGCTTATGCCTATGTTACTCTGTCAGCCAGCAAGTaGCCCTCAGAAACCCGCAGG +
Preference number: 5 (lower is better)
Translates to: PLHWNTVGETFPAYAYVTLSASK*PSETRR
Trigger: CCTGCGGGTTTCTGAGGGCAACTTGCTGGCTGACAG...AGTAACATAGGCATAAGCAGGGAACGTTTCCCCCACTGTGTTCCAGTGCAGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CAA 90 bp GCGGGCATGGGACTTCTTATTCACGTAGCTGGAAAGGACATTCTAGCATGGGGACTGTCAGCCAGCAAGTaGCCCTCAGAAACCCGCAGG +
Preference number: 5 (lower is better)
Translates to: AGMGLLIHVAGKDILAWGLSASK*PSETRR
Trigger: CCTGCGGGTTTCTGAGGGCAACTTGCTGGCTGACAG...TCCCCATGCTAGAATGTCCTTTCCAGCTACGTGAATAAGAAGTCCCATGCCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CAA 90 bp CAGCACGGTGGAGGCCCTGGTGCTGCGGAACGAACCAGGCATCCACCAGGCTTCTCCAATAAACTCAAGTaGAATGGTTTCCCACTGCAA +
Preference number: 5 (lower is better)
Translates to: QHGGGPGAAERTRHPPGFSNKLK*NGFPLQ
Trigger: TTGCAGTGGGAAACCATTCAACTTGAGTTTATTGGA...GAAGCCTGGTGGATGCCTGGTTCGTTCCGCAGCACCAGGGCCTCCACCGTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CAA 90 bp CTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGGGGACAGAACACAATTaGGCCCCTCAAGCAATGACT +
Preference number: 5 (lower is better)
Translates to: LPRPRAHMLFCTITRTQPGTEHN*APQAMT
Trigger: AGTCATTGCTTGAGGGGCCAAATTGTGTTCTGTCCC...CGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp GCAGAAGCAGCTTCCCACCCAAGCACCTCTGAACTGTGCGTGAGGAGGCACAATAAAGCAACTGATCACTaGCTGACAGCTCAGCCACGG +
Preference number: 5 (lower is better)
Translates to: AEAASHPSTSELCVRRHNKATDH*LTAQPR
Trigger: CCGTGGCTGAGCTGTCAGCAAGTGATCAGTTGCTTT...ATTGTGCCTCCTCACGCACAGTTCAGAGGTGCTTGGGTGGGAAGCTGCTTCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544132.2
CDS TCA 90 bp ATGGGCTGTCCATATACTGTCATAGTCAGAGTCTTCCGAGAGGTCTaGAGGCTCCAAACGAGAAAGGCTACTGCGACGCCCCAGGGAGTC +
Preference number: 5 (lower is better)
Translates to: MGCPYTVIVRVFREV*RLQTRKATATPQGV
Trigger: GACTCCCTGGGGCGTCGCAGTAGCCTTTCTCGTTTGGAGCCTTCAGACCTCTCGGAAGACTCTGACTATGACAGTATATGGACAGCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000218789.9
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
ENST00000478679.5
ENST00000646102.2
CDS CCA 90 bp GATTTATCATTTCATTCGTATCTCTGGCTCTCAGCAGTCAGTTTTTaGGGCCAAACACTAGCTCGCGCCACCTGGGCCGAGCGTGGGGCT +
Preference number: 5 (lower is better)
Translates to: DLSFHSYLWLSAVSF*GQTLARATWAERGA
Trigger: AGCCCCACGCTCGGCCCAGGTGGCGCGAGCTAGTGTTTGGCCCCAAAAACTGACTGCTGAGAGCCAGAGATACGAATGAAATGATAAATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491688.1
CDS-3UTR CAA 90 bp GCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGCACTGCTCTTACTACCAGTaGATTGTTGCTATTATCGGT +
Preference number: 5 (lower is better)
Translates to: AVRWRQALNTRDARPSVHCSYYQ*IVAIIG
Trigger: ACCGATAATAGCAACAATCAACTGGTAGTAAGAGCA...GTGCACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp AGAACACAGCCGTTGGAACTGGGCTCACAGCACCTTTGCTGCATATATTCTTCTGGGCTGCTGGCACCTTaGGTCTCCATGAACTCCCCC +
Preference number: 5 (lower is better)
Translates to: RTQPLELGSQHLCCIYSSGLLAP*VSMNSP
Trigger: GGGGGAGTTCATGGAGACCAAAGGTGCCAGCAGCCC...AGAAGAATATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp AGAACACAGCCGTTGGAACTGGGCTCACAGCACCTTTGCTGCATATATTCTTCTAGGCGCATGAAGGGTTaGCTCAGGCCCGTGGTCAGC +
Preference number: 5 (lower is better)
Translates to: RTQPLELGSQHLCCIYSSRRMKG*LRPVVS
Trigger: GCTGACCACGGGCCTGAGCAAACCCTTCATGCGCCT...AGAAGAATATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp GCGGCAGTGCCGTATGGGCCTTCCTTGAGGTCAAGACTGAGTCTGTCAGCCAGCTTGTCATTCCTGTCGTaGGAAGCTTTCCCTGATAGA +
Preference number: 5 (lower is better)
Translates to: AAVPYGPSLRSRLSLSASLSFLS*EAFPDR
Trigger: TCTATCAGGGAAAGCTTCCAACGACAGGAATGACAA...GCTGGCTGACAGACTCAGTCTTGACCTCAAGGAAGGCCCATACGGCACTGCCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CAA 90 bp CTAGGGCCACACGGAGCAGAAGCAGCTTCCCACCCAAGCACCTCTGAACTGTGCTTGTCATTCCTGTCGTaGGAAGCTTTCCCTGATAGA +
Preference number: 5 (lower is better)
Translates to: LGPHGAEAASHPSTSELCLSFLS*EAFPDR
Trigger: TCTATCAGGGAAAGCTTCCAACGACAGGAATGACAA...GCACAGTTCAGAGGTGCTTGGGTGGGAAGCTGCTTCTGCTCCGTGTGGCCCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544132.2
CDS-3UTR CAA 90 bp CTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTGCAGATCCTGCTGGTaGTTGCACGACACTAATATC +
Preference number: 5 (lower is better)
Translates to: LPRPRAHMLFCTITRTQPCRSCW*LHDTNI
Trigger: GATATTAGTGTCGTGCAACAACCAGCAGGATCTGCA...CGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp CTTCTTATTCACGTAGCTGGAAAGGACATTCTAGCATGGGGATTAGCCCGGACATTGCTGTCTGCGTGCTaGCTGGACGGAGTGACCGGG +
Preference number: 5 (lower is better)
Translates to: LLIHVAGKDILAWGLARTLLSAC*LDGVTG
Trigger: CCCGGTCACTCCGTCCAGCAAGCACGCAGACAGCAA...TGTCCGGGCTAATCCCCATGCTAGAATGTCCTTTCCAGCTACGTGAATAAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CAA 90 bp TGCAGAAGGGTGATTGGCACAATACGTGAGGTACAGGGTTTTCATCTGTGGCATTTGCTGTCTGCGTGCTaGCTGGACGGAGTGACCGGG +
Preference number: 5 (lower is better)
Translates to: CRRVIGTIREVQGFHLWHLLSAC*LDGVTG
Trigger: CCCGGTCACTCCGTCCAGCAAGCACGCAGACAGCAA...ATGCCACAGATGAAAACCCTGTACCTCACGTATTGTGCCAATCACCCTTCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR CAA 90 bp GCTTGTTCCATGCTGAATGAAGCCACCCAACTTTCTAAACAACGTGCTACTGCCCTCAGGCTCCAGGGCTaGGGTGTTTTCGGAGGCTCC +
Preference number: 5 (lower is better)
Translates to: ACSMLNEATQLSKQRATALRLQG*GVFGGS
Trigger: GGAGCCTCCGAAAACACCCAAGCCCTGGAGCCTGAG...GGCAGTAGCACGTTGTTTAGAAAGTTGGGTGGCTTCATTCAGCATGGAACAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp CGATTACCAGAACACAGCCGTTGGAACTGGGCTCACAGCACCTTTGCTGCATATGGCTTCCGTTCAGGTTaGCGCTTGGGCAGCAGCTTT +
Preference number: 5 (lower is better)
Translates to: RLPEHSRWNWAHSTFAAYGFRSG*RLGSSF
Trigger: AAAGCTGCTGCCCAAGCGCAAACCTGAACGGAAGCC...ATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp CTGGGGACTCGGACAGCAACGCTACCGGCTCCGAGAGGACAGTTAATGTCGCCTTTCTGGAAGCAAAACTaGTGGAGCAGATTCTTTGCG +
Preference number: 5 (lower is better)
Translates to: LGTRTATLPAPRGQLMSPFWKQN*WSRFFA
Trigger: CGCAAAGAATCTGCTCCACAAGTTTTGCTTCCAGAA...AGGCGACATTAACTGTCCTCTCGGAGCCGGTAGCGTTGCTGTCCGAGTCCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CAA 90 bp AACGAAAACCTGCTCCACGGGCCGGGCTTCCTGCCCAGGACCGCACAGGCTTTCTCCAATAAACTCAAGTaGAATGGTTTCCCACTGCAA +
Preference number: 5 (lower is better)
Translates to: NENLLHGPGFLPRTAQAFSNKLK*NGFPLQ
Trigger: TTGCAGTGGGAAACCATTCAACTTGAGTTTATTGGA...GAAAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGTGGAGCAGGTTTTCGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CAA 90 bp AGAACCGTAAACAGCAACACAACACTCTCCCAAGGTGCCCAGCTCAAAGGCATCGGAGTTTCTCCACACTaGTCAACAGGCGCCCTGGGT +
Preference number: 5 (lower is better)
Translates to: RTVNSNTTLSQGAQLKGIGVSPH*STGALG
Trigger: ACCCAGGGCGCCTGTTGACAAGTGTGGAGAAACTCC...GATGCCTTTGAGCTGGGCACCTTGGGAGAGTGTTGTGTTGCTGTTTACGGTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CAA 90 bp GCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGCACCATTACAATGAGGCATaGTGGTTTTATACTATGGGG +
Preference number: 5 (lower is better)
Translates to: AVRWRQALNTRDARPSVHHYNEA*WFYTMG
Trigger: CCCCATAGTATAAAACCACAATGCCTCATTGTAATG...GTGCACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp AACGAAAACCTGCTCCACGGGCCGGGCTTCCTGCCCAGGACCGCACAGGCTTTCTTGCGTGAACTTGAATaGAGTGTTTGCCTTGTTTTG +
Preference number: 5 (lower is better)
Translates to: NENLLHGPGFLPRTAQAFLRELE*SVCLVL
Trigger: CAAAACAAGGCAAACACTCAATTCAAGTTCACGCAA...GAAAGCCTGTGCGGTCCTGGGCAGGAAGCCCGGCCCGTGGAGCAGGTTTTCGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CAA 90 bp ATCTACAGGATAAGAAATGGCTTCATCTCCTCATCCATACAAGGTGAGAGCAAACAGCCGGTCCGGCCGTaGAGTGTGCCCTCCCACCAG +
Preference number: 5 (lower is better)
Translates to: IYRIRNGFISSSIQGESKQPVRP*SVPSHQ
Trigger: CTGGTGGGAGGGCACACTCAACGGCCGGACCGGCTG...TTTGCTCTCACCTTGTATGGATGAGGAGATGAAGCCATTTCTTATCCTGTAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CAA 90 bp GGATTTGATGCTACAACTGAATGCAACAGGTCACATTCAGTGCTTTTTGAAGCACAGCCGGTCCGGCCGTaGAGTGTGCCCTCCCACCAG +
Preference number: 5 (lower is better)
Translates to: GFDATTECNRSHSVLFEAQPVRP*SVPSHQ
Trigger: CTGGTGGGAGGGCACACTCAACGGCCGGACCGGCTG...TGCTTCAAAAAGCACTGAATGTGACCTGTTGCATTCAGTTGTAGCATCAAATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp ACCTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCGTCGTATCAAATCCTTaGGGAGGGCTCTTCAGTGTT +
Preference number: 5 (lower is better)
Translates to: TCQGPEPTCCSARLPEHSVVSNP*GGLFSV
Trigger: AACACTGAAGAGCCCTCCCAAAGGATTTGATACGAC...GCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp ACCTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCATGGCCGTAGGTACGTaGAAAGCACAGTCTGAAGTT +
Preference number: 5 (lower is better)
Translates to: TCQGPEPTCCSARLPEHSMAVGT*KAQSEV
Trigger: AACTTCAGACTGTGCTTTCAACGTACCTACGGCCAT...GCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp TTACGAAGAGCACCCTCGGATGTAGGCTCACGTGAACACACCACCTCCCTCCAAAGATCCTGCTGGTTGTaGCACGACACTAATATCCGC +
Preference number: 5 (lower is better)
Translates to: LRRAPSDVGSREHTTSLQRSCWL*HDTNIR
Trigger: GCGGATATTAGTGTCGTGCAACAACCAGCAGGATCT...TTGGAGGGAGGTGGTGTGTTCACGTGAGCCTACATCCGAGGGTGCTCTTCGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp AGAACCGTAAACAGCAACACAACACTCTCCCAAGGTGCCCAGCTCAAAGGCATCAGCTTCTCCAGGTCTTaGCGGGCTCTCTGTTCTTCC +
Preference number: 5 (lower is better)
Translates to: RTVNSNTTLSQGAQLKGISFSRS*RALCSS
Trigger: GGAAGAACAGAGAGCCCGCAAAGACCTGGAGAAGCT...GATGCCTTTGAGCTGGGCACCTTGGGAGAGTGTTGTGTTGCTGTTTACGGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CAA 90 bp GCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGCACCGATACAACAAGCATTaGTTAAGAAAAGCTCAGAAG +
Preference number: 5 (lower is better)
Translates to: AVRWRQALNTRDARPSVHRYNKH*LRKAQK
Trigger: CTTCTGAGCTTTTCTTAACAAATGCTTGTTGTATCG...GTGCACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp CATCTGAGCCATGACAGTAAGCTCTGCCTTTGGAAAGGAGAGCTCCCACTTCACACTGAATACGTGGGTTaGGCGAAGGAGTGGGCAGTG +
Preference number: 5 (lower is better)
Translates to: HLSHDSKLCLWKGELPLHTEYVG*AKEWAV
Trigger: CACTGCCCACTCCTTCGCCAAACCCACGTATTCAGT...GTGAAGTGGGAGCTCTCCTTTCCAAAGGCAGAGCTTACTGTCATGGCTCAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp ACCTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCGTGCAGCAACTGTGTTaGAGTGTTGTGGTCTACACA +
Preference number: 5 (lower is better)
Translates to: TCQGPEPTCCSARLPEHSVQQLC*SVVVYT
Trigger: TGTGTAGACCACAACACTCAAACACAGTTGCTGCAC...GCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS TCA 90 bp TTCTTCCAAAGCAGCTGTGCTTTTCCGGGACGCGAACTCCTCATCTaGAGGCTTCCGTTCAGGTTTGCGCTTGGGCAGCAGCTTTTTCAT +
Preference number: 5 (lower is better)
Translates to: FFQSSCAFPGRELLI*RLPFRFALGQQLFH
Trigger: ATGAAAAAGCTGCTGCCCAAGCGCAAACCTGAACGGAAGCCTTCAGATGAGGAGTTCGCGTCCCGGAAAAGCACAGCTGCTTTGGAAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000218789.9
ENST00000317133.9
ENST00000375723.5
ENST00000375736.8
ENST00000375739.6
ENST00000375741.6
ENST00000426073.6
ENST00000478679.5
ENST00000646102.2
CDS TCA 90 bp CTGGAAGGAGGAGAAGCACCAAGTCCTTACGGTATGAGATGGCACTaGATGAGGCTTTATGGTGGGGTTTCCCACAGACGTGACCTTCGT +
Preference number: 5 (lower is better)
Translates to: LEGGEAPSPYGMRWH*MRLYGGVSHRRDLR
Trigger: ACGAAGGTCACGTCTGTGGGAAACCCCACCATAAAGCCTCATTCAGTGCCATCTCATACCGTAAGGACTTGGTGCTTCTCCTCCTTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544132.2
CDS-3UTR CAA 90 bp TTACGAAGAGCACCCTCGGATGTAGGCTCACGTGAACACACCACCTCCCTCCAAGAAAGCTCGTCCTCATaGGTCTGCTGGAAGTTAAAC +
Preference number: 5 (lower is better)
Translates to: LRRAPSDVGSREHTTSLQESSSS*VCWKLN
Trigger: GTTTAACTTCCAGCAGACCAATGAGGACGAGCTTTC...TTGGAGGGAGGTGGTGTGTTCACGTGAGCCTACATCCGAGGGTGCTCTTCGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp AGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAAATGGCCGTAGGTACGTaGAAAGCACAGTCTGAAGTT +
Preference number: 5 (lower is better)
Translates to: RPRAHMLFCTITRTQPLEMAVGT*KAQSEV
Trigger: AACTTCAGACTGTGCTTTCAACGTACCTACGGCCAT...TTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp TTACGAAGAGCACCCTCGGATGTAGGCTCACGTGAACACACCACCTCCCTCCAAATGGCCGTAGGTACGTaGAAAGCACAGTCTGAAGTT +
Preference number: 5 (lower is better)
Translates to: LRRAPSDVGSREHTTSLQMAVGT*KAQSEV
Trigger: AACTTCAGACTGTGCTTTCAACGTACCTACGGCCAT...TTGGAGGGAGGTGGTGTGTTCACGTGAGCCTACATCCGAGGGTGCTCTTCGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp AGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAATGTCTCTCGAGCTCTTaGAGCAGCGTAGGGTATTTA +
Preference number: 5 (lower is better)
Translates to: RPRAHMLFCTITRTQPLECLSSS*SSVGYL
Trigger: TAAATACCCTACGCTGCTCAAAGAGCTCGAGAGACA...TTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp GCGGGCATGGGACTTCTTATTCACGTAGCTGGAAAGGACATTCTAGCATGGGGACGTTCAGGTTTGCGCTaGGGCAGCAGCTTTTTCATG +
Preference number: 5 (lower is better)
Translates to: AGMGLLIHVAGKDILAWGRSGLR*GSSFFM
Trigger: CATGAAAAAGCTGCTGCCCAAGCGCAAACCTGAACG...TCCCCATGCTAGAATGTCCTTTCCAGCTACGTGAATAAGAAGTCCCATGCCCGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CAA 90 bp TCCCAGAGAAGTGAAGAAATGATTGGCATTAAGGAGTCCACACAACCAGGGCAGGGAGTTTCTCCACACTaGTCAACAGGCGCCCTGGGT +
Preference number: 5 (lower is better)
Translates to: SQRSEEMIGIKESTQPGQGVSPH*STGALG
Trigger: ACCCAGGGCGCCTGTTGACAAGTGTGGAGAAACTCC...CTGCCCTGGTTGTGTGGACTCCTTAATGCCAATCATTTCTTCACTTCTCTGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CAA 90 bp GCTTGTTCCATGCTGAATGAAGCCACCCAACTTTCTAAACAACGTGCTACTGCCGAGCCACGTAACGGTTaGCTCGGCGGAATTCATCGC +
Preference number: 5 (lower is better)
Translates to: ACSMLNEATQLSKQRATAEPRNG*LGGIHR
Trigger: GCGATGAATTCCGCCGAGCAAACCGTTACGTGGCTC...GGCAGTAGCACGTTGTTTAGAAAGTTGGGTGGCTTCATTCAGCATGGAACAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp AGAACACAGCCGTTGGAACTGGGCTCACAGCACCTTTGCTGCATATATTCTTCTGAGCCACGTAACGGTTaGCTCGGCGGAATTCATCGC +
Preference number: 5 (lower is better)
Translates to: RTQPLELGSQHLCCIYSSEPRNG*LGGIHR
Trigger: GCGATGAATTCCGCCGAGCAAACCGTTACGTGGCTC...AGAAGAATATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317133.9
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp AGAGCCGTGAGGTGGAGACAAGCTCTGAACACACGTGACGCCCGCCCGTCTGTGCAGTTCAGTAGCTACTaGGGAACAAATATTTGGAAT +
Preference number: 5 (lower is better)
Translates to: RAVRWRQALNTRDARPSVQFSSY*GTNIWN
Trigger: ATTCCAAATATTTGTTCCCAAGTAGCTACTGAACTG...CACAGACGGGCGGGCGTCACGTGTGTTCAGAGCTTGTCTCCACCTCACGGCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp CCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAACTGGGCTCACGTGCAGCAACTGTGTTaGAGTGTTGTGGTCTACACA +
Preference number: 5 (lower is better)
Translates to: PTCCSARLPEHSRWNWAHVQQLC*SVVVYT
Trigger: TGTGTAGACCACAACACTCAAACACAGTTGCTGCAC...GTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp AAACAATGGCCCTCTGGATGCCACATCGCCACTGCCACAGGAGAACTGTCTTTTCACCATTTAGGCCATTaGCAAAGGCCTGGTGATGGC +
Preference number: 5 (lower is better)
Translates to: KQWPSGCHIATATGELSFHHLGH*QRPGDG
Trigger: GCCATCACCAGGCCTTTGCAAATGGCCTAAATGGTG...AAAAGACAGTTCTCCTGTGGCAGTGGCGATGTGGCATCCAGAGGGCCATTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp ACGCCCAGCGCATGTGGACAAGCACAGACGCCACTGAGTGTGAAGGAACGAGCTTGTGGAGCAGATTCTTaGCGTGAACTTGAATTGAGT +
Preference number: 5 (lower is better)
Translates to: TPSACGQAQTPLSVKERACGADS*RELELS
Trigger: ACTCAATTCAAGTTCACGCAAAGAATCTGCTCCACA...AGCTCGTTCCTTCACACTCAGTGGCGTCTGTGCTTGTCCACATGCGCTGGGCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375736.8
ENST00000426073.6
CDS TCA 90 bp CCAGCCTCCCTCTTCCACACGGGTGACATGGATGACGTCTCCTTTTaGGAAGGAAAGCTCGTCCTCATTGGTCTGCTGGAAGTTAAACTT +
Preference number: 5 (lower is better)
Translates to: PASLFHTGDMDDVSF*EGKLVLIGLLEVKL
Trigger: AAGTTTAACTTCCAGCAGACCAATGAGGACGAGCTTTCCTTCTCAAAAGGAGACGTCATCCATGTCACCCGTGTGGAAGAGGGAGGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000218789.9
ENST00000317133.9
ENST00000375723.5
ENST00000375736.8
ENST00000375739.6
ENST00000375741.6
ENST00000426073.6
ENST00000426768.2
ENST00000449979.5
ENST00000466143.5
ENST00000467053.5
ENST00000469877.5
ENST00000646102.2
CDS TCA 90 bp CCCAACTCCTCACTGTGTTCCGTGAGGACATTCACTGCAGAAGGGTaGTTGGCACAATACGTGAGGTACAGGGTTTTCATCTGTGGCATC +
Preference number: 5 (lower is better)
Translates to: PNSSLCSVRTFTAEG*LAQYVRYRVFICGI
Trigger: GATGCCACAGATGAAAACCCTGTACCTCACGTATTGTGCCAATCACCCTTCTGCAGTGAATGTCCTCACGGAACACAGTGAGGAGTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000218789.9
ENST00000317133.9
ENST00000375723.5
ENST00000375736.8
ENST00000375739.6
ENST00000375741.6
ENST00000426073.6
ENST00000466143.5
ENST00000478679.5
ENST00000483189.1
ENST00000646102.2
CDS TCA 90 bp CGCCCCAGGGAGTCTAGGCTTGGTTGGTCATCATCAGCCAAGACGTaGTTATGCATCAGGTCAGTGCCTTGCCATGTTGAATTGAGTGTT +
Preference number: 5 (lower is better)
Translates to: RPRESRLGWSSSAKT*LCIRSVPCHVELSV
Trigger: AACACTCAATTCAACATGGCAAGGCACTGACCTGATGCATAATCACGTCTTGGCTGATGATGACCAACCAAGCCTAGACTCCCTGGGGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000218789.9
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
ENST00000478679.5
ENST00000646102.2
CDS TCA 90 bp AGTTCACGTGGGCTTCGGGCCACACTGACTTCAGCTGGATCAAACTaGTCAACAAGTCCACACTCAGCTCTAAGCCTCTCTAACATGCCA +
Preference number: 5 (lower is better)
Translates to: SSRGLRATLTSAGSN*STSPHSALSLSNMP
Trigger: TGGCATGTTAGAGAGGCTTAGAGCTGAGTGTGGACTTGTTGATCAGTTTGATCCAGCTGAAGTCAGTGTGGCCCGAAGCCCACGTGAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483189.1
CDS TCA 90 bp CTGCACACTATCTATCCTTCAGTTCACGTGGGCTTCGGGCCACACTaGCTTCAGCTGGATCAAACTGATCAACAAGTCCACACTCAGCTC +
Preference number: 5 (lower is better)
Translates to: LHTIYPSVHVGFGPH*LQLDQTDQQVHTQL
Trigger: GAGCTGAGTGTGGACTTGTTGATCAGTTTGATCCAGCTGAAGTCAGTGTGGCCCGAAGCCCACGTGAACTGAAGGATAGATAGTGTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483189.1
CDS GCA 90 bp CAGATAAGCGCATACAGCTCCATGCGGATGTGTGCACAGGACTCCTaGAAGTCTTTCTGCACACTATCTATCCTTCAGTTCACGTGGGCT +
Preference number: 5 (lower is better)
Translates to: QISAYSSMRMCAQDS*KSFCTLSILQFTWA
Trigger: AGCCCACGTGAACTGAAGGATAGATAGTGTGCAGAAAGACTTGCAGGAGTCCTGTGCACACATCCGCATGGAGCTGTATGCGCTTATCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483189.1
CDS CCA 90 bp TCTATCCTTCAGTTCACGTGGGCTTCGGGCCACACTGACTTCAGCTaGATCAAACTGATCAACAAGTCCACACTCAGCTCTAAGCCTCTC +
Preference number: 5 (lower is better)
Translates to: SILQFTWASGHTDFS*IKLINKSTLSSKPL
Trigger: GAGAGGCTTAGAGCTGAGTGTGGACTTGTTGATCAGTTTGATCCAGCTGAAGTCAGTGTGGCCCGAAGCCCACGTGAACTGAAGGATAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483189.1
CDS-3UTR CAA 90 bp CCATTAGCTTGTTCCATGCTGAATGAAGCCACCCAACTTTCTAAACAACGTGCTAGGAACTCGCGGATGTaGCTCAGGCACTCGCTCTCG +
Preference number: 5 (lower is better)
Translates to: PLACSMLNEATQLSKQRARNSRM*LRHSLS
Trigger: CGAGAGCGAGTGCCTGAGCAACATCCGCGAGTTCCT...AGCACGTTGTTTAGAAAGTTGGGTGGCTTCATTCAGCATGGAACAAGCTAATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375741.6
CDS-3UTR CAA 90 bp AAAGGAAACCAAAAGCAAAGTCCCTGTGGTCACCCTTATTTATTGCTGAAGCAGGGGCTGCTGGCACCTTaGGTCTCCATGAACTCCCCC +
Preference number: 5 (lower is better)
Translates to: KGNQKQSPCGHPYLLLKQGLLAP*VSMNSP
Trigger: GGGGGAGTTCATGGAGACCAAAGGTGCCAGCAGCCC...CTGCTTCAGCAATAAATAAGGGTGACCACAGGGACTTTGCTTTTGGTTTCCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CAA 90 bp TTACGAAGAGCACCCTCGGATGTAGGCTCACGTGAACACACCACCTCCCTCCAATTGTCATTCCTGTCGTaGGAAGCTTTCCCTGATAGA +
Preference number: 5 (lower is better)
Translates to: LRRAPSDVGSREHTTSLQLSFLS*EAFPDR
Trigger: TCTATCAGGGAAAGCTTCCAACGACAGGAATGACAA...TTGGAGGGAGGTGGTGTGTTCACGTGAGCCTACATCCGAGGGTGCTCTTCGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp GACCTGGGACATGTAAGTGACGTTGCCCAGAGTTTTAATGTCATCGCCCTCCCAAGATCCTGCTGGTTGTaGCACGACACTAATATCCGC +
Preference number: 5 (lower is better)
Translates to: DLGHVSDVAQSFNVIALPRSCWL*HDTNIR
Trigger: GCGGATATTAGTGTCGTGCAACAACCAGCAGGATCT...TGGGAGGGCGATGACATTAAAACTCTGGGCAACGTCACTTACATGTCCCAGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR CAA 90 bp ACATCTAAGAAAAGCAGGCTGCGATACAACAAGCATTTGTTAAGAAAAGCTCAGGTCAGCGGCGCGGGCTaGCTGTCTGCGTGCTTGCTG +
Preference number: 5 (lower is better)
Translates to: TSKKSRLRYNKHLLRKAQVSGAG*LSACLL
Trigger: CAGCAAGCACGCAGACAGCAAGCCCGCGCCGCTGAC...CTGAGCTTTTCTTAACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
ENST00000478679.5
CDS-3UTR CAA 90 bp CCTGCTACAACAGCAAACTCCAATAAACTCAAGTTGAATGGTTTCCCACTGCAACTCAGGCTCCAGGGCTaGGGTGTTTTCGGAGGCTCC +
Preference number: 5 (lower is better)
Translates to: PATTANSNKLKLNGFPLQLRLQG*GVFGGS
Trigger: GGAGCCTCCGAAAACACCCAAGCCCTGGAGCCTGAG...TTGCAGTGGGAAACCATTCAACTTGAGTTTATTGGAGTTTGCTGTTGTAGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CAA 90 bp ATAGTCAGTCATTCGAATGTATACTCGCATCGGCAGTTAAGCCTCCACAAAGTACTCAGGCTCCAGGGCTaGGGTGTTTTCGGAGGCTCC +
Preference number: 5 (lower is better)
Translates to: IVSHSNVYSHRQLSLHKVLRLQG*GVFGGS
Trigger: GGAGCCTCCGAAAACACCCAAGCCCTGGAGCCTGAG...TACTTTGTGGAGGCTTAACTGCCGATGCGAGTATACATTCGAATGACTGACTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp GAAATTGGTCTGAGTGAGGCCAGTGAAAACTCCTTACAACAAATCCCAGGAAAACTCAGGCTCCAGGGCTaGGGTGTTTTCGGAGGCTCC +
Preference number: 5 (lower is better)
Translates to: EIGLSEASENSLQQIPGKLRLQG*GVFGGS
Trigger: GGAGCCTCCGAAAACACCCAAGCCCTGGAGCCTGAG...TTTTCCTGGGATTTGTTGTAAGGAGTTTTCACTGGCCTCACTCAGACCAATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp CATCTGAGAATCACAGTACTCAGACAGCGGACAAGAGCAAACACCTCTAGGTGGCGTTCAGGTTTGCGCTaGGGCAGCAGCTTTTTCATG +
Preference number: 5 (lower is better)
Translates to: HLRITVLRQRTRANTSRWRSGLR*GSSFFM
Trigger: CATGAAAAAGCTGCTGCCCAAGCGCAAACCTGAACG...CCACCTAGAGGTGTTTGCTCTTGTCCGCTGTCTGAGTACTGTGATTCTCAGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CAA 90 bp ACCTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCCTTGCCATGTTGAATaGAGTGTTTGCCTTGTTTTG +
Preference number: 5 (lower is better)
Translates to: TCQGPEPTCCSARLPEHSPCHVE*SVCLVL
Trigger: CAAAACAAGGCAAACACTCAATTCAACATGGCAAGG...GCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp GCTTGTTCCATGCTGAATGAAGCCACCCAACTTTCTAAACAACGTGCTACTGCCCCAGGGAGTCTAGGCTaGGTTGGTCATCATCAGCCA +
Preference number: 5 (lower is better)
Translates to: ACSMLNEATQLSKQRATAPGSLG*VGHHQP
Trigger: TGGCTGATGATGACCAACCAAGCCTAGACTCCCTGG...GGCAGTAGCACGTTGTTTAGAAAGTTGGGTGGCTTCATTCAGCATGGAACAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp CTTCTTATTCACGTAGCTGGAAAGGACATTCTAGCATGGGGATTAGCCCGGACACCGTATGGGCCTTCCTaGAGGTCAAGACTGAGTCTG +
Preference number: 5 (lower is better)
Translates to: LLIHVAGKDILAWGLARTPYGPS*RSRLSL
Trigger: CAGACTCAGTCTTGACCTCAAGGAAGGCCCATACGG...TGTCCGGGCTAATCCCCATGCTAGAATGTCCTTTCCAGCTACGTGAATAAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CAA 90 bp AAACAATGGCCCTCTGGATGCCACATCGCCACTGCCACAGGAGAACTGTCTTTTGGGACAGAACACAATTaGGCCCCTCAAGCAATGACT +
Preference number: 5 (lower is better)
Translates to: KQWPSGCHIATATGELSFGTEHN*APQAMT
Trigger: AGTCATTGCTTGAGGGGCCAAATTGTGTTCTGTCCC...AAAAGACAGTTCTCCTGTGGCAGTGGCGATGTGGCATCCAGAGGGCCATTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS CCA 90 bp GACTCCTGCAAGTCTTTCTGCACACTATCTATCCTTCAGTTCACGTaGGCTTCGGGCCACACTGACTTCAGCTGGATCAAACTGATCAAC +
Preference number: 5 (lower is better)
Translates to: DSCKSFCTLSILQFT*ASGHTDFSWIKLIN
Trigger: GTTGATCAGTTTGATCCAGCTGAAGTCAGTGTGGCCCGAAGCCCACGTGAACTGAAGGATAGATAGTGTGCAGAAAGACTTGCAGGAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483189.1
CDS-3UTR CAA 90 bp CTGTGGTCACCCTTATTTATTGCTGAAGCAGAACGAAAACCTGCTCCACGGGCCGTCGTATCAAATCCTTaGGGAGGGCTCTTCAGTGTT +
Preference number: 5 (lower is better)
Translates to: LWSPLFIAEAERKPAPRAVVSNP*GGLFSV
Trigger: AACACTGAAGAGCCCTCCCAAAGGATTTGATACGAC...GGCCCGTGGAGCAGGTTTTCGTTCTGCTTCAGCAATAAATAAGGGTGACCACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CAA 90 bp GGATTTGATGCTACAACTGAATGCAACAGGTCACATTCAGTGCTTTTTGAAGCAGGGCTGCTGGCACCTTaGGTCTCCATGAACTCCCCC +
Preference number: 5 (lower is better)
Translates to: GFDATTECNRSHSVLFEAGLLAP*VSMNSP
Trigger: GGGGGAGTTCATGGAGACCAAAGGTGCCAGCAGCCC...TGCTTCAAAAAGCACTGAATGTGACCTGTTGCATTCAGTTGTAGCATCAAATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp AGGGGAAGGGCTGTTAAAAACACAAGTATTCTTGTGAAATACTTCGATCTGAGCAGGCGCATGAAGGGTTaGCTCAGGCCCGTGGTCAGC +
Preference number: 5 (lower is better)
Translates to: RGRAVKNTSILVKYFDLSRRMKG*LRPVVS
Trigger: GCTGACCACGGGCCTGAGCAAACCCTTCATGCGCCT...GCTCAGATCGAAGTATTTCACAAGAATACTTGTGTTTTTAACAGCCCTTCCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CAA 90 bp AAAGTAGAAACAATGGCCCTCTGGATGCCACATCGCCACTGCCACAGGAGAACTTGTCTCTCGAGCTCTTaGAGCAGCGTAGGGTATTTA +
Preference number: 5 (lower is better)
Translates to: KVETMALWMPHRHCHRRTCLSSS*SSVGYL
Trigger: TAAATACCCTACGCTGCTCAAAGAGCTCGAGAGACA...AGTTCTCCTGTGGCAGTGGCGATGTGGCATCCAGAGGGCCATTGTTTCTACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp ACCTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCGGCAGCCATGGATTTTaGAATATCTTGTCTATCTGT +
Preference number: 5 (lower is better)
Translates to: TCQGPEPTCCSARLPEHSGSHGF*NILSIC
Trigger: ACAGATAGACAAGATATTCAAAAATCCATGGCTGCC...GCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp CGATTACCAGAACACAGCCGTTGGAACTGGGCTCACAGCACCTTTGCTGCATATTGCAGATCCTGCTGGTaGTTGCACGACACTAATATC +
Preference number: 5 (lower is better)
Translates to: RLPEHSRWNWAHSTFAAYCRSCW*LHDTNI
Trigger: GATATTAGTGTCGTGCAACAACCAGCAGGATCTGCA...ATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp TTTGTTGTTACTGAACTAGCCTATACAGAACCGTCTGTGTCCTCCCAAAACGCAGGCTTCCGTTCAGGTTaGCGCTTGGGCAGCAGCTTT +
Preference number: 5 (lower is better)
Translates to: FVVTELAYTEPSVSSQNAGFRSG*RLGSSF
Trigger: AAAGCTGCTGCCCAAGCGCAAACCTGAACGGAAGCC...TGCGTTTTGGGAGGACACAGACGGTTCTGTATAGGCTAGTTCAGTAACAACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CAA 90 bp GTGTATTTTGTTGTTACTGAACTAGCCTATACAGAACCGTCTGTGTCCTCCCAACTGTCAGCCAGCAAGTaGCCCTCAGAAACCCGCAGG +
Preference number: 5 (lower is better)
Translates to: VYFVVTELAYTEPSVSSQLSASK*PSETRR
Trigger: CCTGCGGGTTTCTGAGGGCAACTTGCTGGCTGACAG...TTGGGAGGACACAGACGGTTCTGTATAGGCTAGTTCAGTAACAACAAAATACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CAA 90 bp TTACGAAGAGCACCCTCGGATGTAGGCTCACGTGAACACACCACCTCCCTCCAATCTCTCCACAACTACTaGATCAGTGTTCATAGCACT +
Preference number: 5 (lower is better)
Translates to: LRRAPSDVGSREHTTSLQSLHNY*ISVHST
Trigger: AGTGCTATGAACACTGATCAAGTAGTTGTGGAGAGA...TTGGAGGGAGGTGGTGTGTTCACGTGAGCCTACATCCGAGGGTGCTCTTCGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp AGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAATCTCTCCACAACTACTaGATCAGTGTTCATAGCACT +
Preference number: 5 (lower is better)
Translates to: RPRAHMLFCTITRTQPLESLHNY*ISVHST
Trigger: AGTGCTATGAACACTGATCAAGTAGTTGTGGAGAGA...TTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp TTACGAAGAGCACCCTCGGATGTAGGCTCACGTGAACACACCACCTCCCTCCAACTTGGGAACAAATATTaGGAATTAACAGCTGCCCTG +
Preference number: 5 (lower is better)
Translates to: LRRAPSDVGSREHTTSLQLGNKY*ELTAAL
Trigger: CAGGGCAGCTGTTAATTCCAAATATTTGTTCCCAAG...TTGGAGGGAGGTGGTGTGTTCACGTGAGCCTACATCCGAGGGTGCTCTTCGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS GCA 90 bp GCTTCTGTAGGTGCTCCACCCATTCCTGCAGATCCTGCTGGTTGTTaGACGACACTAATATCCGCTCAATCATGCTCCCTGATATTTCAA +
Preference number: 5 (lower is better)
Translates to: ASVGAPPIPADPAGC*TTLISAQSCSLIFQ
Trigger: TTGAAATATCAGGGAGCATGATTGAGCGGATATTAGTGTCGTGCAACAACCAGCAGGATCTGCAGGAATGGGTGGAGCACCTACAGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000218789.9
ENST00000317133.9
ENST00000375723.5
ENST00000375736.8
ENST00000375739.6
ENST00000375741.6
ENST00000426073.6
ENST00000466143.5
ENST00000478679.5
ENST00000544132.2
ENST00000646102.2
CDS-3UTR CAA 90 bp GGACATGTAAGTGACGTTGCCCAGAGTTTTAATGTCATCGCCCTCCCAGTTCCGCCTGATACAAATCATTaGCATCAAACGTCTCCAGCC +
Preference number: 5 (lower is better)
Translates to: GHVSDVAQSFNVIALPVPPDTNH*HQTSPA
Trigger: GGCTGGAGACGTTTGATGCAAATGATTTGTATCAGG...CGGAACTGGGAGGGCGATGACATTAAAACTCTGGGCAACGTCACTTACATGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR CAA 90 bp CATCTGAGAATCACAGTACTCAGACAGCGGACAAGAGCAAACACCTCTAGGTGGATGGCCGTAGGTACGTaGAAAGCACAGTCTGAAGTT +
Preference number: 5 (lower is better)
Translates to: HLRITVLRQRTRANTSRWMAVGT*KAQSEV
Trigger: AACTTCAGACTGTGCTTTCAACGTACCTACGGCCAT...CCACCTAGAGGTGTTTGCTCTTGTCCGCTGTCTGAGTACTGTGATTCTCAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CAA 90 bp AGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAAAGACTGTACGAGCATTaGCTGGAAAGAACATATTTC +
Preference number: 5 (lower is better)
Translates to: RPRAHMLFCTITRTQPLERLYEH*LERTYF
Trigger: GAAATATGTTCTTTCCAGCAAATGCTCGTACAGTCT...TTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp ACATCTAAGAAAAGCAGGCTGCGATACAACAAGCATTTGTTAAGAAAAGCTCAGGGGCTGCTGGCACCTTaGGTCTCCATGAACTCCCCC +
Preference number: 5 (lower is better)
Translates to: TSKKSRLRYNKHLLRKAQGLLAP*VSMNSP
Trigger: GGGGGAGTTCATGGAGACCAAAGGTGCCAGCAGCCC...CTGAGCTTTTCTTAACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAGATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
ENST00000478679.5
CDS-3UTR CAA 90 bp ACATCTAAGAAAAGCAGGCTGCGATACAACAAGCATTTGTTAAGAAAAGCTCAGAGGCGCATGAAGGGTTaGCTCAGGCCCGTGGTCAGC +
Preference number: 5 (lower is better)
Translates to: TSKKSRLRYNKHLLRKAQRRMKG*LRPVVS
Trigger: GCTGACCACGGGCCTGAGCAAACCCTTCATGCGCCT...CTGAGCTTTTCTTAACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
ENST00000478679.5
CDS-3UTR CAA 90 bp TCCACCAGGCTTCTGCTTCCGGTGGATGCGGGCATGGGACTTCTTATTCACGTAGGCAGCCATGGATTTTaGAATATCTTGTCTATCTGT +
Preference number: 5 (lower is better)
Translates to: STRLLLPVDAGMGLLIHVGSHGF*NILSIC
Trigger: ACAGATAGACAAGATATTCAAAAATCCATGGCTGCC...TACGTGAATAAGAAGTCCCATGCCCGCATCCACCGGAAGCAGAAGCCTGGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CAA 90 bp CGATTACCAGAACACAGCCGTTGGAACTGGGCTCACAGCACCTTTGCTGCATATTTGTCATTCCTGTCGTaGGAAGCTTTCCCTGATAGA +
Preference number: 5 (lower is better)
Translates to: RLPEHSRWNWAHSTFAAYLSFLS*EAFPDR
Trigger: TCTATCAGGGAAAGCTTCCAACGACAGGAATGACAA...ATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp AAAGTAGAAACAATGGCCCTCTGGATGCCACATCGCCACTGCCACAGGAGAACTTTGTCATTCCTGTCGTaGGAAGCTTTCCCTGATAGA +
Preference number: 5 (lower is better)
Translates to: KVETMALWMPHRHCHRRTLSFLS*EAFPDR
Trigger: TCTATCAGGGAAAGCTTCCAACGACAGGAATGACAA...AGTTCTCCTGTGGCAGTGGCGATGTGGCATCCAGAGGGCCATTGTTTCTACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp AGAACCGTAAACAGCAACACAACACTCTCCCAAGGTGCCCAGCTCAAAGGCATCTTGTCATTCCTGTCGTaGGAAGCTTTCCCTGATAGA +
Preference number: 5 (lower is better)
Translates to: RTVNSNTTLSQGAQLKGILSFLS*EAFPDR
Trigger: TCTATCAGGGAAAGCTTCCAACGACAGGAATGACAA...GATGCCTTTGAGCTGGGCACCTTGGGAGAGTGTTGTGTTGCTGTTTACGGTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CAA 90 bp CCTCTACTACAGTCCAGTAGTCTACACTTGCAGAGGCTGAATGCTTCAGCTTTCAGATCCTGCTGGTTGTaGCACGACACTAATATCCGC +
Preference number: 5 (lower is better)
Translates to: PLLQSSSLHLQRLNASAFRSCWL*HDTNIR
Trigger: GCGGATATTAGTGTCGTGCAACAACCAGCAGGATCT...GAAAGCTGAAGCATTCAGCCTCTGCAAGTGTAGACTACTGGACTGTAGTAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp ACGGTGAAACAGACACAGTTATATACAACAGGGCAGGTTTTTAAAAAGAGTTGCTTGCTGTCTGCGTGCTaGCTGGACGGAGTGACCGGG +
Preference number: 5 (lower is better)
Translates to: TVKQTQLYTTGQVFKKSCLLSAC*LDGVTG
Trigger: CCCGGTCACTCCGTCCAGCAAGCACGCAGACAGCAA...GCAACTCTTTTTAAAAACCTGCCCTGTTGTATATAACTGTGTCTGTTTCACCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CAA 90 bp ACATCTAAGAAAAGCAGGCTGCGATACAACAAGCATTTGTTAAGAAAAGCTCAGTTGCTGTCTGCGTGCTaGCTGGACGGAGTGACCGGG +
Preference number: 5 (lower is better)
Translates to: TSKKSRLRYNKHLLRKAQLLSAC*LDGVTG
Trigger: CCCGGTCACTCCGTCCAGCAAGCACGCAGACAGCAA...CTGAGCTTTTCTTAACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
ENST00000478679.5
CDS-3UTR CAA 90 bp ACATCTAAGAAAAGCAGGCTGCGATACAACAAGCATTTGTTAAGAAAAGCTCAGCTCAGGCTCCAGGGCTaGGGTGTTTTCGGAGGCTCC +
Preference number: 5 (lower is better)
Translates to: TSKKSRLRYNKHLLRKAQLRLQG*GVFGGS
Trigger: GGAGCCTCCGAAAACACCCAAGCCCTGGAGCCTGAG...CTGAGCTTTTCTTAACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
ENST00000478679.5
CDS-3UTR CAA 90 bp AAAGGAAACCAAAAGCAAAGTCCCTGTGGTCACCCTTATTTATTGCTGAAGCAGGGCTTCCGTTCAGGTTaGCGCTTGGGCAGCAGCTTT +
Preference number: 5 (lower is better)
Translates to: KGNQKQSPCGHPYLLLKQGFRSG*RLGSSF
Trigger: AAAGCTGCTGCCCAAGCGCAAACCTGAACGGAAGCC...CTGCTTCAGCAATAAATAAGGGTGACCACAGGGACTTTGCTTTTGGTTTCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CAA 90 bp GCGGGCATGGGACTTCTTATTCACGTAGCTGGAAAGGACATTCTAGCATGGGGATTCATCAGTCATGGTTaGATCGTCTCCATTCGCAGA +
Preference number: 5 (lower is better)
Translates to: AGMGLLIHVAGKDILAWGFISHG*IVSIRR
Trigger: TCTGCGAATGGAGACGATCAAACCATGACTGATGAA...TCCCCATGCTAGAATGTCCTTTCCAGCTACGTGAATAAGAAGTCCCATGCCCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CAA 90 bp AGAACCGTAAACAGCAACACAACACTCTCCCAAGGTGCCCAGCTCAAAGGCATCTTCATCAGTCATGGTTaGATCGTCTCCATTCGCAGA +
Preference number: 5 (lower is better)
Translates to: RTVNSNTTLSQGAQLKGIFISHG*IVSIRR
Trigger: TCTGCGAATGGAGACGATCAAACCATGACTGATGAA...GATGCCTTTGAGCTGGGCACCTTGGGAGAGTGTTGTGTTGCTGTTTACGGTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CAA 90 bp CATCTGAGCCATGACAGTAAGCTCTGCCTTTGGAAAGGAGAGCTCCCACTTCACCTGAAAACGAGACGTTaGTTTCGCTTTGCTACCTTG +
Preference number: 5 (lower is better)
Translates to: HLSHDSKLCLWKGELPLHLKTRR*FRFATL
Trigger: CAAGGTAGCAAAGCGAAACAAACGTCTCGTTTTCAG...GTGAAGTGGGAGCTCTCCTTTCCAAAGGCAGAGCTTACTGTCATGGCTCAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317133.9
CDS-3UTR CAA 90 bp ACCTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGATACAACAAGCATTaGTTAAGAAAAGCTCAGAAG +
Preference number: 5 (lower is better)
Translates to: TCQGPEPTCCSARLPEHSRYNKH*LRKAQK
Trigger: CTTCTGAGCTTTTCTTAACAAATGCTTGTTGTATCG...GCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp CCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAACTGGGCTCACTTTCACTGCAGCTGGTaGCTGAAAATAATGATGTGT +
Preference number: 5 (lower is better)
Translates to: PTCCSARLPEHSRWNWAHFHCSW*LKIMMC
Trigger: ACACATCATTATTTTCAGCAACCAGCTGCAGTGAAA...GTGAGCCCAGTTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp CCATTAGCTTGTTCCATGCTGAATGAAGCCACCCAACTTTCTAAACAACGTGCTACTGAATACGTGGGTTaGGCGAAGGAGTGGGCAGTG +
Preference number: 5 (lower is better)
Translates to: PLACSMLNEATQLSKQRATEYVG*AKEWAV
Trigger: CACTGCCCACTCCTTCGCCAAACCCACGTATTCAGT...AGCACGTTGTTTAGAAAGTTGGGTGGCTTCATTCAGCATGGAACAAGCTAATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp ACCTGCCAAGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCAAAACAAACACTTCATaGCCATATGCAACCACAAAC +
Preference number: 5 (lower is better)
Translates to: TCQGPEPTCCSARLPEHSKTNTS*PYATTN
Trigger: GTTTGTGGTTGCATATGGCAATGAAGTGTTTGTTTT...GCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCTTGGCAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp ACATCTAAGAAAAGCAGGCTGCGATACAACAAGCATTTGTTAAGAAAAGCTCAGAGGAACTCGCGGATGTaGCTCAGGCACTCGCTCTCG +
Preference number: 5 (lower is better)
Translates to: TSKKSRLRYNKHLLRKAQRNSRM*LRHSLS
Trigger: CGAGAGCGAGTGCCTGAGCAACATCCGCGAGTTCCT...CTGAGCTTTTCTTAACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317133.9
ENST00000375741.6
CDS-3UTR CAA 90 bp TGCAGAAGGGTGATTGGCACAATACGTGAGGTACAGGGTTTTCATCTGTGGCATGAAAGCTCGTCCTCATaGGTCTGCTGGAAGTTAAAC +
Preference number: 5 (lower is better)
Translates to: CRRVIGTIREVQGFHLWHESSSS*VCWKLN
Trigger: GTTTAACTTCCAGCAGACCAATGAGGACGAGCTTTC...ATGCCACAGATGAAAACCCTGTACCTCACGTATTGTGCCAATCACCCTTCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR CAA 90 bp CCTCTACTACAGTCCAGTAGTCTACACTTGCAGAGGCTGAATGCTTCAGCTTTCGTCGTATCAAATCCTTaGGGAGGGCTCTTCAGTGTT +
Preference number: 5 (lower is better)
Translates to: PLLQSSSLHLQRLNASAFVVSNP*GGLFSV
Trigger: AACACTGAAGAGCCCTCCCAAAGGATTTGATACGAC...GAAAGCTGAAGCATTCAGCCTCTGCAAGTGTAGACTACTGGACTGTAGTAGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp TGCAGAAGGGTGATTGGCACAATACGTGAGGTACAGGGTTTTCATCTGTGGCATGTCGTATCAAATCCTTaGGGAGGGCTCTTCAGTGTT +
Preference number: 5 (lower is better)
Translates to: CRRVIGTIREVQGFHLWHVVSNP*GGLFSV
Trigger: AACACTGAAGAGCCCTCCCAAAGGATTTGATACGAC...ATGCCACAGATGAAAACCCTGTACCTCACGTATTGTGCCAATCACCCTTCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR CAA 90 bp TTTGTTGTTACTGAACTAGCCTATACAGAACCGTCTGTGTCCTCCCAAAACGCACGTTCAGGTTTGCGCTaGGGCAGCAGCTTTTTCATG +
Preference number: 5 (lower is better)
Translates to: FVVTELAYTEPSVSSQNARSGLR*GSSFFM
Trigger: CATGAAAAAGCTGCTGCCCAAGCGCAAACCTGAACG...TGCGTTTTGGGAGGACACAGACGGTTCTGTATAGGCTAGTTCAGTAACAACAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CAA 90 bp CCATTAGCTTGTTCCATGCTGAATGAAGCCACCCAACTTTCTAAACAACGTGCTCGTTCAGGTTTGCGCTaGGGCAGCAGCTTTTTCATG +
Preference number: 5 (lower is better)
Translates to: PLACSMLNEATQLSKQRARSGLR*GSSFFM
Trigger: CATGAAAAAGCTGCTGCCCAAGCGCAAACCTGAACG...AGCACGTTGTTTAGAAAGTTGGGTGGCTTCATTCAGCATGGAACAAGCTAATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp GAAATTGGTCTGAGTGAGGCCAGTGAAAACTCCTTACAACAAATCCCAGGAAAACCAGGGAGTCTAGGCTaGGTTGGTCATCATCAGCCA +
Preference number: 5 (lower is better)
Translates to: EIGLSEASENSLQQIPGKPGSLG*VGHHQP
Trigger: TGGCTGATGATGACCAACCAAGCCTAGACTCCCTGG...TTTTCCTGGGATTTGTTGTAAGGAGTTTTCACTGGCCTCACTCAGACCAATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp CATCTGAGAATCACAGTACTCAGACAGCGGACAAGAGCAAACACCTCTAGGTGGTTCTGGAAGCAAAACTaGTGGAGCAGATTCTTTGCG +
Preference number: 5 (lower is better)
Translates to: HLRITVLRQRTRANTSRWFWKQN*WSRFFA
Trigger: CGCAAAGAATCTGCTCCACAAGTTTTGCTTCCAGAA...CCACCTAGAGGTGTTTGCTCTTGTCCGCTGTCTGAGTACTGTGATTCTCAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CAA 90 bp AGAACCGTAAACAGCAACACAACACTCTCCCAAGGTGCCCAGCTCAAAGGCATCGGTCACCCTTATTTATaGCTGAAGCAGAACGAAAAC +
Preference number: 5 (lower is better)
Translates to: RTVNSNTTLSQGAQLKGIGHPYL*LKQNEN
Trigger: GTTTTCGTTCTGCTTCAGCAATAAATAAGGGTGACC...GATGCCTTTGAGCTGGGCACCTTGGGAGAGTGTTGTGTTGCTGTTTACGGTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CAA 90 bp AGAACACAGCCGTTGGAACTGGGCTCACAGCACCTTTGCTGCATATATTCTTCTGGGCTCACAGCACCTTaGCTGCATATATTCTTCTCA +
Preference number: 5 (lower is better)
Translates to: RTQPLELGSQHLCCIYSSGLTAP*LHIFFS
Trigger: TGAGAAGAATATATGCAGCAAAGGTGCTGTGAGCCC...AGAAGAATATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp TTACGAAGAGCACCCTCGGATGTAGGCTCACGTGAACACACCACCTCCCTCCAAATTTACTATGGCATCTaGTTTTCTGAAGCTGGTTTC +
Preference number: 5 (lower is better)
Translates to: LRRAPSDVGSREHTTSLQIYYGI*FSEAGF
Trigger: GAAACCAGCTTCAGAAAACAAGATGCCATAGTAAAT...TTGGAGGGAGGTGGTGTGTTCACGTGAGCCTACATCCGAGGGTGCTCTTCGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp CCTCTACTACAGTCCAGTAGTCTACACTTGCAGAGGCTGAATGCTTCAGCTTTCGTGCAGCAACTGTGTTaGAGTGTTGTGGTCTACACA +
Preference number: 5 (lower is better)
Translates to: PLLQSSSLHLQRLNASAFVQQLC*SVVVYT
Trigger: TGTGTAGACCACAACACTCAAACACAGTTGCTGCAC...GAAAGCTGAAGCATTCAGCCTCTGCAAGTGTAGACTACTGGACTGTAGTAGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp AGGCCCAGAGCCCACATGCTGTTCTGCACGATTACCAGAACACAGCCGTTGGAAAAAACAAACACTTCATaGCCATATGCAACCACAAAC +
Preference number: 5 (lower is better)
Translates to: RPRAHMLFCTITRTQPLEKTNTS*PYATTN
Trigger: GTTTGTGGTTGCATATGGCAATGAAGTGTTTGTTTT...TTCCAACGGCTGTGTTCTGGTAATCGTGCAGAACAGCATGTGGGCTCTGGGCCT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp TTACGAAGAGCACCCTCGGATGTAGGCTCACGTGAACACACCACCTCCCTCCAACCTGATACAAATCATTaGCATCAAACGTTTTCTCGA +
Preference number: 5 (lower is better)
Translates to: LRRAPSDVGSREHTTSLQPDTNH*HQTFSR
Trigger: TCGAGAAAACGTTTGATGCAAATGATTTGTATCAGG...TTGGAGGGAGGTGGTGTGTTCACGTGAGCCTACATCCGAGGGTGCTCTTCGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375739.6
CDS-3UTR CAA 90 bp CCTCTACTACAGTCCAGTAGTCTACACTTGCAGAGGCTGAATGCTTCAGCTTTCCCTGATACAAATCATTaGCATCAAACGTCTCCAGCC +
Preference number: 5 (lower is better)
Translates to: PLLQSSSLHLQRLNASAFPDTNH*HQTSPA
Trigger: GGCTGGAGACGTTTGATGCAAATGATTTGTATCAGG...GAAAGCTGAAGCATTCAGCCTCTGCAAGTGTAGACTACTGGACTGTAGTAGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317133.9
CDS-3UTR CAA 90 bp CCTCTGCACTGGAACACAGTGGGGGAAACGTTCCCTGCTTATGCCTATGTTACTTGCTCTTACTACCAGTaGATTGTTGCTATTATCGGT +
Preference number: 5 (lower is better)
Translates to: PLHWNTVGETFPAYAYVTCSYYQ*IVAIIG
Trigger: ACCGATAATAGCAACAATCAACTGGTAGTAAGAGCA...AGTAACATAGGCATAAGCAGGGAACGTTTCCCCCACTGTGTTCCAGTGCAGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CAA 90 bp CATCTGAGCCATGACAGTAAGCTCTGCCTTTGGAAAGGAGAGCTCCCACTTCACTGCTCTTACTACCAGTaGATTGTTGCTATTATCGGT +
Preference number: 5 (lower is better)
Translates to: HLSHDSKLCLWKGELPLHCSYYQ*IVAIIG
Trigger: ACCGATAATAGCAACAATCAACTGGTAGTAAGAGCA...GTGAAGTGGGAGCTCTCCTTTCCAAAGGCAGAGCTTACTGTCATGGCTCAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp AAACAATGGCCCTCTGGATGCCACATCGCCACTGCCACAGGAGAACTGTCTTTTTGCTCTTACTACCAGTaGATTGTTGCTATTATCGGT +
Preference number: 5 (lower is better)
Translates to: KQWPSGCHIATATGELSFCSYYQ*IVAIIG
Trigger: ACCGATAATAGCAACAATCAACTGGTAGTAAGAGCA...AAAAGACAGTTCTCCTGTGGCAGTGGCGATGTGGCATCCAGAGGGCCATTGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp GACCTGGGACATGTAAGTGACGTTGCCCAGAGTTTTAATGTCATCGCCCTCCCATGCTCTTACTACCAGTaGATTGTTGCTATTATCGGT +
Preference number: 5 (lower is better)
Translates to: DLGHVSDVAQSFNVIALPCSYYQ*IVAIIG
Trigger: ACCGATAATAGCAACAATCAACTGGTAGTAAGAGCA...TGGGAGGGCGATGACATTAAAACTCTGGGCAACGTCACTTACATGTCCCAGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR CAA 90 bp AGAACCGTAAACAGCAACACAACACTCTCCCAAGGTGCCCAGCTCAAAGGCATCAGACTGTACGAGCATTaGCTGGAAAGAACATATTTC +
Preference number: 5 (lower is better)
Translates to: RTVNSNTTLSQGAQLKGIRLYEH*LERTYF
Trigger: GAAATATGTTCTTTCCAGCAAATGCTCGTACAGTCT...GATGCCTTTGAGCTGGGCACCTTGGGAGAGTGTTGTGTTGCTGTTTACGGTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CAA 90 bp CATCTGAGCCATGACAGTAAGCTCTGCCTTTGGAAAGGAGAGCTCCCACTTCACAGACTGTACGAGCATTaGCTGGAAAGAACATATTTC +
Preference number: 5 (lower is better)
Translates to: HLSHDSKLCLWKGELPLHRLYEH*LERTYF
Trigger: GAAATATGTTCTTTCCAGCAAATGCTCGTACAGTCT...GTGAAGTGGGAGCTCTCCTTTCCAAAGGCAGAGCTTACTGTCATGGCTCAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp CCTCTGCACTGGAACACAGTGGGGGAAACGTTCCCTGCTTATGCCTATGTTACTAGACTGTACGAGCATTaGCTGGAAAGAACATATTTC +
Preference number: 5 (lower is better)
Translates to: PLHWNTVGETFPAYAYVTRLYEH*LERTYF
Trigger: GAAATATGTTCTTTCCAGCAAATGCTCGTACAGTCT...AGTAACATAGGCATAAGCAGGGAACGTTTCCCCCACTGTGTTCCAGTGCAGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CAA 90 bp AAACAATGGCCCTCTGGATGCCACATCGCCACTGCCACAGGAGAACTGTCTTTTGGCAGCCATGGATTTTaGAATATCTTGTCTATCTGT +
Preference number: 5 (lower is better)
Translates to: KQWPSGCHIATATGELSFGSHGF*NILSIC
Trigger: ACAGATAGACAAGATATTCAAAAATCCATGGCTGCC...AAAAGACAGTTCTCCTGTGGCAGTGGCGATGTGGCATCCAGAGGGCCATTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp GAAATTGGTCTGAGTGAGGCCAGTGAAAACTCCTTACAACAAATCCCAGGAAAACGTTCAGGTTTGCGCTaGGGCAGCAGCTTTTTCATG +
Preference number: 5 (lower is better)
Translates to: EIGLSEASENSLQQIPGKRSGLR*GSSFFM
Trigger: CATGAAAAAGCTGCTGCCCAAGCGCAAACCTGAACG...TTTTCCTGGGATTTGTTGTAAGGAGTTTTCACTGGCCTCACTCAGACCAATTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp ACATCTAAGAAAAGCAGGCTGCGATACAACAAGCATTTGTTAAGAAAAGCTCAGGGCTTCCGTTCAGGTTaGCGCTTGGGCAGCAGCTTT +
Preference number: 5 (lower is better)
Translates to: TSKKSRLRYNKHLLRKAQGFRSG*RLGSSF
Trigger: AAAGCTGCTGCCCAAGCGCAAACCTGAACGGAAGCC...CTGAGCTTTTCTTAACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
ENST00000478679.5
CDS-3UTR CAA 90 bp AGGGGAAGGGCTGTTAAAAACACAAGTATTCTTGTGAAATACTTCGATCTGAGCCCAGGGAGTCTAGGCTaGGTTGGTCATCATCAGCCA +
Preference number: 5 (lower is better)
Translates to: RGRAVKNTSILVKYFDLSPGSLG*VGHHQP
Trigger: TGGCTGATGATGACCAACCAAGCCTAGACTCCCTGG...GCTCAGATCGAAGTATTTCACAAGAATACTTGTGTTTTTAACAGCCCTTCCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000218789.9
CDS-3UTR CAA 90 bp ATAGTCAGTCATTCGAATGTATACTCGCATCGGCAGTTAAGCCTCCACAAAGTAGACGTTTGTTTCGCTTaGCTACCTTGCAAGCCGGTC +
Preference number: 5 (lower is better)
Translates to: IVSHSNVYSHRQLSLHKVDVCFA*LPCKPV
Trigger: GACCGGCTTGCAAGGTAGCAAAGCGAAACAAACGTC...TACTTTGTGGAGGCTTAACTGCCGATGCGAGTATACATTCGAATGACTGACTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317133.9
CDS-3UTR CAA 90 bp CATCTGAGCCATGACAGTAAGCTCTGCCTTTGGAAAGGAGAGCTCCCACTTCACCATTACAATGAGGCATaGTGGTTTTATACTATGGGG +
Preference number: 5 (lower is better)
Translates to: HLSHDSKLCLWKGELPLHHYNEA*WFYTMG
Trigger: CCCCATAGTATAAAACCACAATGCCTCATTGTAATG...GTGAAGTGGGAGCTCTCCTTTCCAAAGGCAGAGCTTACTGTCATGGCTCAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp GAAATTGGTCTGAGTGAGGCCAGTGAAAACTCCTTACAACAAATCCCAGGAAAACACCATTTAGGCCATTaGCAAAGGCCTGGTGATGGC +
Preference number: 5 (lower is better)
Translates to: EIGLSEASENSLQQIPGKHHLGH*QRPGDG
Trigger: GCCATCACCAGGCCTTTGCAAATGGCCTAAATGGTG...TTTTCCTGGGATTTGTTGTAAGGAGTTTTCACTGGCCTCACTCAGACCAATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp CTGTGGTCACCCTTATTTATTGCTGAAGCAGAACGAAAACCTGCTCCACGGGCCTTGCGTGAACTTGAATaGAGTGTTTGCCTTGTTTTG +
Preference number: 5 (lower is better)
Translates to: LWSPLFIAEAERKPAPRALRELE*SVCLVL
Trigger: CAAAACAAGGCAAACACTCAATTCAAGTTCACGCAA...GGCCCGTGGAGCAGGTTTTCGTTCTGCTTCAGCAATAAATAAGGGTGACCACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375736.8
ENST00000426073.6
CDS TCA 90 bp TTTAGAGTCACTAAGGAACTGAGGACCTTGTTAAAATTCTGCCCCTaGTACAAATCATTTGCATCAAACGTCTCCAGCCGCAGGGAAGCC +
Preference number: 5 (lower is better)
Translates to: FRVTKELRTLLKFCP*YKSFASNVSSRREA
Trigger: GGCTTCCCTGCGGCTGGAGACGTTTGATGCAAATGATTTGTATCAGGGGCAGAATTTTAACAAGGTCCTCAGTTCCTTAGTGACTCTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000218789.9
ENST00000317133.9
ENST00000375736.8
ENST00000466143.5
ENST00000469877.5
ENST00000491775.5
ENST00000646102.2
CDS GCA 90 bp ACTCGCGTGCTCACCGCGAAAGGGCACTTATCACGCACTTCCTTCTaGTCTTTAAACACTCCATGTGAAATAAACCTCAGGATTTATCAT +
Preference number: 5 (lower is better)
Translates to: TRVLTAKGHLSRTSF*SLNTPCEINLRIYH
Trigger: ATGATAAATCCTGAGGTTTATTTCACATGGAGTGTTTAAAGAGCAGAAGGAAGTGCGTGATAAGTGCCCTTTCGCGGTGAGCACGCGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491688.1
CDS-3UTR CAA 90 bp CATCTGAGAATCACAGTACTCAGACAGCGGACAAGAGCAAACACCTCTAGGTGGTGCTCTTACTACCAGTaGATTGTTGCTATTATCGGT +
Preference number: 5 (lower is better)
Translates to: HLRITVLRQRTRANTSRWCSYYQ*IVAIIG
Trigger: ACCGATAATAGCAACAATCAACTGGTAGTAAGAGCA...CCACCTAGAGGTGTTTGCTCTTGTCCGCTGTCTGAGTACTGTGATTCTCAGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CAA 90 bp CCATTAGCTTGTTCCATGCTGAATGAAGCCACCCAACTTTCTAAACAACGTGCTGAAAGCTCGTCCTCATaGGTCTGCTGGAAGTTAAAC +
Preference number: 5 (lower is better)
Translates to: PLACSMLNEATQLSKQRAESSSS*VCWKLN
Trigger: GTTTAACTTCCAGCAGACCAATGAGGACGAGCTTTC...AGCACGTTGTTTAGAAAGTTGGGTGGCTTCATTCAGCATGGAACAAGCTAATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp CAAAGGAGTAACCCTCGGGCAAATCGTGGCCCCTTTAAACGTTTATATCAAGTTGAAAGCTCGTCCTCATaGGTCTGCTGGAAGTTAAAC +
Preference number: 5 (lower is better)
Translates to: QRSNPRANRGPFKRLYQVESSSS*VCWKLN
Trigger: GTTTAACTTCCAGCAGACCAATGAGGACGAGCTTTC...AACTTGATATAAACGTTTAAAGGGGCCACGATTTGCCCGAGGGTTACTCCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CAA 90 bp CCATTAGCTTGTTCCATGCTGAATGAAGCCACCCAACTTTCTAAACAACGTGCTTGTCTCTCGAGCTCTTaGAGCAGCGTAGGGTATTTA +
Preference number: 5 (lower is better)
Translates to: PLACSMLNEATQLSKQRACLSSS*SSVGYL
Trigger: TAAATACCCTACGCTGCTCAAAGAGCTCGAGAGACA...AGCACGTTGTTTAGAAAGTTGGGTGGCTTCATTCAGCATGGAACAAGCTAATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp ATAGTCAGTCATTCGAATGTATACTCGCATCGGCAGTTAAGCCTCCACAAAGTAAGATCCTGCTGGTTGTaGCACGACACTAATATCCGC +
Preference number: 5 (lower is better)
Translates to: IVSHSNVYSHRQLSLHKVRSCWL*HDTNIR
Trigger: GCGGATATTAGTGTCGTGCAACAACCAGCAGGATCT...TACTTTGTGGAGGCTTAACTGCCGATGCGAGTATACATTCGAATGACTGACTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp TTGGAAAACAATTCACTACTGCACGAAGAGGGCCAAAGATCTGCAGAGAAATGTAGATCCTGCTGGTTGTaGCACGACACTAATATCCGC +
Preference number: 5 (lower is better)
Translates to: LENNSLLHEEGQRSAEKCRSCWL*HDTNIR
Trigger: GCGGATATTAGTGTCGTGCAACAACCAGCAGGATCT...ACATTTCTCTGCAGATCTTTGGCCCTCTTCGTGCAGTAGTGAATTGTTTTCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544132.2
CDS-3UTR CAA 90 bp TTTGTTGTTACTGAACTAGCCTATACAGAACCGTCTGTGTCCTCCCAAAACGCATGCAGATCCTGCTGGTaGTTGCACGACACTAATATC +
Preference number: 5 (lower is better)
Translates to: FVVTELAYTEPSVSSQNACRSCW*LHDTNI
Trigger: GATATTAGTGTCGTGCAACAACCAGCAGGATCTGCA...TGCGTTTTGGGAGGACACAGACGGTTCTGTATAGGCTAGTTCAGTAACAACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CAA 90 bp ACAATTCACTACTGCACGAAGAGGGCCAAAGATCTGCAGAGAAATGTGAAGCAATGCAGATCCTGCTGGTaGTTGCACGACACTAATATC +
Preference number: 5 (lower is better)
Translates to: TIHYCTKRAKDLQRNVKQCRSCW*LHDTNI
Trigger: GATATTAGTGTCGTGCAACAACCAGCAGGATCTGCA...TTGCTTCACATTTCTCTGCAGATCTTTGGCCCTCTTCGTGCAGTAGTGAATTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544132.2
CDS-3UTR CAA 90 bp AGAACACAGCCGTTGGAACTGGGCTCACAGCACCTTTGCTGCATATATTCTTCTCCTTGCCATGTTGAATaGAGTGTTTGCCTTGTTTTG +
Preference number: 5 (lower is better)
Translates to: RTQPLELGSQHLCCIYSSPCHVE*SVCLVL
Trigger: CAAAACAAGGCAAACACTCAATTCAACATGGCAAGG...AGAAGAATATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp GCTTGTTCCATGCTGAATGAAGCCACCCAACTTTCTAAACAACGTGCTACTGCCCCTTGCCATGTTGAATaGAGTGTTTGCCTTGTTTTG +
Preference number: 5 (lower is better)
Translates to: ACSMLNEATQLSKQRATAPCHVE*SVCLVL
Trigger: CAAAACAAGGCAAACACTCAATTCAACATGGCAAGG...GGCAGTAGCACGTTGTTTAGAAAGTTGGGTGGCTTCATTCAGCATGGAACAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp ACATCTAAGAAAAGCAGGCTGCGATACAACAAGCATTTGTTAAGAAAAGCTCAGCCAGGGAGTCTAGGCTaGGTTGGTCATCATCAGCCA +
Preference number: 5 (lower is better)
Translates to: TSKKSRLRYNKHLLRKAQPGSLG*VGHHQP
Trigger: TGGCTGATGATGACCAACCAAGCCTAGACTCCCTGG...CTGAGCTTTTCTTAACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
ENST00000478679.5
CDS-3UTR CAA 90 bp GCTTGTTCCATGCTGAATGAAGCCACCCAACTTTCTAAACAACGTGCTACTGCCTCTCTCCACAACTACTaGATCAGTGTTCATAGCACT +
Preference number: 5 (lower is better)
Translates to: ACSMLNEATQLSKQRATASLHNY*ISVHST
Trigger: AGTGCTATGAACACTGATCAAGTAGTTGTGGAGAGA...GGCAGTAGCACGTTGTTTAGAAAGTTGGGTGGCTTCATTCAGCATGGAACAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp AGAACACAGCCGTTGGAACTGGGCTCACAGCACCTTTGCTGCATATATTCTTCTCTTGGGAACAAATATTaGGAATTAACAGCTGCCCTG +
Preference number: 5 (lower is better)
Translates to: RTQPLELGSQHLCCIYSSLGNKY*ELTAAL
Trigger: CAGGGCAGCTGTTAATTCCAAATATTTGTTCCCAAG...AGAAGAATATATGCAGCAAAGGTGCTGTGAGCCCAGTTCCAACGGCTGTGTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp AAAGTAGAAACAATGGCCCTCTGGATGCCACATCGCCACTGCCACAGGAGAACTCAGTTCAGTAGCTACTaGGGAACAAATATTTGGAAT +
Preference number: 5 (lower is better)
Translates to: KVETMALWMPHRHCHRRTQFSSY*GTNIWN
Trigger: ATTCCAAATATTTGTTCCCAAGTAGCTACTGAACTG...AGTTCTCCTGTGGCAGTGGCGATGTGGCATCCAGAGGGCCATTGTTTCTACTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp GAACTGTGCGTGAGGAGGCACAATTCAGGGTTGTTTCTCGAGAACACTCATTGGTCTCGAGAACACTCATaGGAAAACAATTCACTACTG +
Preference number: 5 (lower is better)
Translates to: ELCVRRHNSGLFLENTHWSREHS*ENNSLL
Trigger: CAGTAGTGAATTGTTTTCCAATGAGTGTTCTCGAGA...CCAATGAGTGTTCTCGAGAAACAACCCTGAATTGTGCCTCCTCACGCACAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544132.2
CDS TCA 90 bp TCCTCATTGGTCTGCTGGAAGTTAAACTTTGCTCTTACTACCAGTTaGTTGTTGCTATTATCGGTCATGTCCAAACTCCGATACTGGCCC +
Preference number: 5 (lower is better)
Translates to: SSLVCWKLNFALTTS*LLLLSVMSKLRYWP
Trigger: GGGCCAGTATCGGAGTTTGGACATGACCGATAATAGCAACAATCAACTGGTAGTAAGAGCAAAGTTTAACTTCCAGCAGACCAATGAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000218789.9
ENST00000317133.9
ENST00000375723.5
ENST00000375736.8
ENST00000375739.6
ENST00000375741.6
ENST00000426073.6
ENST00000426768.2
ENST00000449979.5
ENST00000466143.5
ENST00000467053.5
ENST00000491775.5
ENST00000646102.2
CDS CCA 90 bp CCACATTGTAATAGCTTTTGTTTATGGCAGTCGTATCAAATCCTTTaGGAGGGCTCTTCAGTGTTCCTGATTTGGGAGACACAGGCTTCT +
Preference number: 5 (lower is better)
Translates to: PHCNSFCLWQSYQIL*EGSSVFLIWETQAS
Trigger: AGAAGCCTGTGTCTCCCAAATCAGGAACACTGAAGAGCCCTCCCAAAGGATTTGATACGACTGCCATAAACAAAAGCTATTACAATGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000218789.9
ENST00000317133.9
ENST00000375723.5
ENST00000375736.8
ENST00000375739.6
ENST00000375741.6
ENST00000426073.6
ENST00000466143.5
ENST00000646102.2
CDS CCA 90 bp GCACATTGTAATAGCTTTTGTTTATGGCAGTCGTATCAAATCCTTTaGGAGGGCTCTTCAGTGTTCCTGATTTGGGAGACACAGGCTTCT +
Preference number: 5 (lower is better)
Translates to: AHCNSFCLWQSYQIL*EGSSVFLIWETQAS
Trigger: AGAAGCCTGTGTCTCCCAAATCAGGAACACTGAAGAGCCCTCCCAAAGGATTTGATACGACTGCCATAAACAAAAGCTATTACAATGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR CAA 90 bp TCAGGTCCTCAGAGTCAATCCCTCCTGTCTGGATTCATCAGTCATGGTTTGATCTGCTCTTACTACCAGTaGATTGTTGCTATTATCGGT +
Preference number: 5 (lower is better)
Translates to: SGPQSQSLLSGFISHGLICSYYQ*IVAIIG
Trigger: ACCGATAATAGCAACAATCAACTGGTAGTAAGAGCA...GATCAAACCATGACTGATGAATCCAGACAGGAGGGATTGACTCTGAGGACCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CAA 90 bp AAAGGAAACCAAAAGCAAAGTCCCTGTGGTCACCCTTATTTATTGCTGAAGCAGGAAAGCTCGTCCTCATaGGTCTGCTGGAAGTTAAAC +
Preference number: 5 (lower is better)
Translates to: KGNQKQSPCGHPYLLLKQESSSS*VCWKLN
Trigger: GTTTAACTTCCAGCAGACCAATGAGGACGAGCTTTC...CTGCTTCAGCAATAAATAAGGGTGACCACAGGGACTTTGCTTTTGGTTTCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CAA 90 bp ATAGTCAGTCATTCGAATGTATACTCGCATCGGCAGTTAAGCCTCCACAAAGTAGAAAGCTCGTCCTCATaGGTCTGCTGGAAGTTAAAC +
Preference number: 5 (lower is better)
Translates to: IVSHSNVYSHRQLSLHKVESSSS*VCWKLN
Trigger: GTTTAACTTCCAGCAGACCAATGAGGACGAGCTTTC...TACTTTGTGGAGGCTTAACTGCCGATGCGAGTATACATTCGAATGACTGACTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp GAAATTGGTCTGAGTGAGGCCAGTGAAAACTCCTTACAACAAATCCCAGGAAAAGTCGTATCAAATCCTTaGGGAGGGCTCTTCAGTGTT +
Preference number: 5 (lower is better)
Translates to: EIGLSEASENSLQQIPGKVVSNP*GGLFSV
Trigger: AACACTGAAGAGCCCTCCCAAAGGATTTGATACGAC...TTTTCCTGGGATTTGTTGTAAGGAGTTTTCACTGGCCTCACTCAGACCAATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp GTGTATTTTGTTGTTACTGAACTAGCCTATACAGAACCGTCTGTGTCCTCCCAAATGGCCGTAGGTACGTaGAAAGCACAGTCTGAAGTT +
Preference number: 5 (lower is better)
Translates to: VYFVVTELAYTEPSVSSQMAVGT*KAQSEV
Trigger: AACTTCAGACTGTGCTTTCAACGTACCTACGGCCAT...TTGGGAGGACACAGACGGTTCTGTATAGGCTAGTTCAGTAACAACAAAATACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CAA 90 bp CCTCTACTACAGTCCAGTAGTCTACACTTGCAGAGGCTGAATGCTTCAGCTTTCAGACTGTACGAGCATTaGCTGGAAAGAACATATTTC +
Preference number: 5 (lower is better)
Translates to: PLLQSSSLHLQRLNASAFRLYEH*LERTYF
Trigger: GAAATATGTTCTTTCCAGCAAATGCTCGTACAGTCT...GAAAGCTGAAGCATTCAGCCTCTGCAAGTGTAGACTACTGGACTGTAGTAGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp GCTTGTTCCATGCTGAATGAAGCCACCCAACTTTCTAAACAACGTGCTACTGCCGGCAGCCATGGATTTTaGAATATCTTGTCTATCTGT +
Preference number: 5 (lower is better)
Translates to: ACSMLNEATQLSKQRATAGSHGF*NILSIC
Trigger: ACAGATAGACAAGATATTCAAAAATCCATGGCTGCC...GGCAGTAGCACGTTGTTTAGAAAGTTGGGTGGCTTCATTCAGCATGGAACAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp TGCAGAAGGGTGATTGGCACAATACGTGAGGTACAGGGTTTTCATCTGTGGCATGGCAGCCATGGATTTTaGAATATCTTGTCTATCTGT +
Preference number: 5 (lower is better)
Translates to: CRRVIGTIREVQGFHLWHGSHGF*NILSIC
Trigger: ACAGATAGACAAGATATTCAAAAATCCATGGCTGCC...ATGCCACAGATGAAAACCCTGTACCTCACGTATTGTGCCAATCACCCTTCTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS-3UTR CAA 90 bp ATAGTCAGTCATTCGAATGTATACTCGCATCGGCAGTTAAGCCTCCACAAAGTATGCAGATCCTGCTGGTaGTTGCACGACACTAATATC +
Preference number: 5 (lower is better)
Translates to: IVSHSNVYSHRQLSLHKVCRSCW*LHDTNI
Trigger: GATATTAGTGTCGTGCAACAACCAGCAGGATCTGCA...TACTTTGTGGAGGCTTAACTGCCGATGCGAGTATACATTCGAATGACTGACTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp ACATCTAAGAAAAGCAGGCTGCGATACAACAAGCATTTGTTAAGAAAAGCTCAGCGTTCAGGTTTGCGCTaGGGCAGCAGCTTTTTCATG +
Preference number: 5 (lower is better)
Translates to: TSKKSRLRYNKHLLRKAQRSGLR*GSSFFM
Trigger: CATGAAAAAGCTGCTGCCCAAGCGCAAACCTGAACG...CTGAGCTTTTCTTAACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAGATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
ENST00000478679.5
CDS-3UTR CAA 90 bp GCTTGTTCCATGCTGAATGAAGCCACCCAACTTTCTAAACAACGTGCTACTGCCTTTCACTGCAGCTGGTaGCTGAAAATAATGATGTGT +
Preference number: 5 (lower is better)
Translates to: ACSMLNEATQLSKQRATAFHCSW*LKIMMC
Trigger: ACACATCATTATTTTCAGCAACCAGCTGCAGTGAAA...GGCAGTAGCACGTTGTTTAGAAAGTTGGGTGGCTTCATTCAGCATGGAACAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp GGATTTGATGCTACAACTGAATGCAACAGGTCACATTCAGTGCTTTTTGAAGCAGGGACAGAACACAATTaGGCCCCTCAAGCAATGACT +
Preference number: 5 (lower is better)
Translates to: GFDATTECNRSHSVLFEAGTEHN*APQAMT
Trigger: AGTCATTGCTTGAGGGGCCAAATTGTGTTCTGTCCC...TGCTTCAAAAAGCACTGAATGTGACCTGTTGCATTCAGTTGTAGCATCAAATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp ATCTACAGGATAAGAAATGGCTTCATCTCCTCATCCATACAAGGTGAGAGCAAAGTCGTATCAAATCCTTaGGGAGGGCTCTTCAGTGTT +
Preference number: 5 (lower is better)
Translates to: IYRIRNGFISSSIQGESKVVSNP*GGLFSV
Trigger: AACACTGAAGAGCCCTCCCAAAGGATTTGATACGAC...TTTGCTCTCACCTTGTATGGATGAGGAGATGAAGCCATTTCTTATCCTGTAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CAA 90 bp AGGGGAAGGGCTGTTAAAAACACAAGTATTCTTGTGAAATACTTCGATCTGAGCTGTCTCTCGAGCTCTTaGAGCAGCGTAGGGTATTTA +
Preference number: 5 (lower is better)
Translates to: RGRAVKNTSILVKYFDLSCLSSS*SSVGYL
Trigger: TAAATACCCTACGCTGCTCAAAGAGCTCGAGAGACA...GCTCAGATCGAAGTATTTCACAAGAATACTTGTGTTTTTAACAGCCCTTCCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CAA 90 bp ATAGTCAGTCATTCGAATGTATACTCGCATCGGCAGTTAAGCCTCCACAAAGTATTGTCATTCCTGTCGTaGGAAGCTTTCCCTGATAGA +
Preference number: 5 (lower is better)
Translates to: IVSHSNVYSHRQLSLHKVLSFLS*EAFPDR
Trigger: TCTATCAGGGAAAGCTTCCAACGACAGGAATGACAA...TACTTTGTGGAGGCTTAACTGCCGATGCGAGTATACATTCGAATGACTGACTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp ACGGTGAAACAGACACAGTTATATACAACAGGGCAGGTTTTTAAAAAGAGTTGCAGATCCTGCTGGTTGTaGCACGACACTAATATCCGC +
Preference number: 5 (lower is better)
Translates to: TVKQTQLYTTGQVFKKSCRSCWL*HDTNIR
Trigger: GCGGATATTAGTGTCGTGCAACAACCAGCAGGATCT...GCAACTCTTTTTAAAAACCTGCCCTGTTGTATATAACTGTGTCTGTTTCACCGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CAA 90 bp AAAACAGTGTATTTTGTTGTTACTGAACTAGCCTATACAGAACCGTCTGTGTCCAGATCCTGCTGGTTGTaGCACGACACTAATATCCGC +
Preference number: 5 (lower is better)
Translates to: KTVYFVVTELAYTEPSVSRSCWL*HDTNIR
Trigger: GCGGATATTAGTGTCGTGCAACAACCAGCAGGATCT...GGACACAGACGGTTCTGTATAGGCTAGTTCAGTAACAACAAAATACACTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CAA 90 bp ACATCTAAGAAAAGCAGGCTGCGATACAACAAGCATTTGTTAAGAAAAGCTCAGAGATCCTGCTGGTTGTaGCACGACACTAATATCCGC +
Preference number: 5 (lower is better)
Translates to: TSKKSRLRYNKHLLRKAQRSCWL*HDTNIR
Trigger: GCGGATATTAGTGTCGTGCAACAACCAGCAGGATCT...CTGAGCTTTTCTTAACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
ENST00000478679.5
CDS-3UTR CAA 90 bp TTAAGCCTCCACAAAGTACAATGGGAAATATCAGGAACACTCTCAAAAGTTGTTCGTTCAGGTTTGCGCTaGGGCAGCAGCTTTTTCATG +
Preference number: 5 (lower is better)
Translates to: LSLHKVQWEISGTLSKVVRSGLR*GSSFFM
Trigger: CATGAAAAAGCTGCTGCCCAAGCGCAAACCTGAACG...AACAACTTTTGAGAGTGTTCCTGATATTTCCCATTGTACTTTGTGGAGGCTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp GTGTATTTTGTTGTTACTGAACTAGCCTATACAGAACCGTCTGTGTCCTCCCAATGTGGAGCAGATTCTTaGCGTGAACGAGATGTAGAA +
Preference number: 5 (lower is better)
Translates to: VYFVVTELAYTEPSVSSQCGADS*RERDVE
Trigger: TTCTACATCTCGTTCACGCAAAGAATCTGCTCCACA...TTGGGAGGACACAGACGGTTCTGTATAGGCTAGTTCAGTAACAACAAAATACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000218789.9
CDS-3UTR CAA 90 bp GTGTATTTTGTTGTTACTGAACTAGCCTATACAGAACCGTCTGTGTCCTCCCAATTCTGGAAGCAAAACTaGTGGAGCAGATTCTTTGCG +
Preference number: 5 (lower is better)
Translates to: VYFVVTELAYTEPSVSSQFWKQN*WSRFFA
Trigger: CGCAAAGAATCTGCTCCACAAGTTTTGCTTCCAGAA...TTGGGAGGACACAGACGGTTCTGTATAGGCTAGTTCAGTAACAACAAAATACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CAA 90 bp AAAACAGTGTATTTTGTTGTTACTGAACTAGCCTATACAGAACCGTCTGTGTCCGACATCCCTTATAGATaGGTCTCATCCCAGGCAGGA +
Preference number: 5 (lower is better)
Translates to: KTVYFVVTELAYTEPSVSDIPYR*VSSQAG
Trigger: TCCTGCCTGGGATGAGACCAATCTATAAGGGATGTC...GGACACAGACGGTTCTGTATAGGCTAGTTCAGTAACAACAAAATACACTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CAA 90 bp ACGGTGAAACAGACACAGTTATATACAACAGGGCAGGTTTTTAAAAAGAGTTGCGACATCCCTTATAGATaGGTCTCATCCCAGGCAGGA +
Preference number: 5 (lower is better)
Translates to: TVKQTQLYTTGQVFKKSCDIPYR*VSSQAG
Trigger: TCCTGCCTGGGATGAGACCAATCTATAAGGGATGTC...GCAACTCTTTTTAAAAACCTGCCCTGTTGTATATAACTGTGTCTGTTTCACCGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CAA 90 bp CAAAGGAGTAACCCTCGGGCAAATCGTGGCCCCTTTAAACGTTTATATCAAGTTGGTCACCCTTATTTATaGCTGAAGCAGAACGAAAAC +
Preference number: 5 (lower is better)
Translates to: QRSNPRANRGPFKRLYQVGHPYL*LKQNEN
Trigger: GTTTTCGTTCTGCTTCAGCAATAAATAAGGGTGACC...AACTTGATATAAACGTTTAAAGGGGCCACGATTTGCCCGAGGGTTACTCCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CAA 90 bp GGATTTGATGCTACAACTGAATGCAACAGGTCACATTCAGTGCTTTTTGAAGCAGGGCTCACAGCACCTTaGCTGCATATATTCTTCTCA +
Preference number: 5 (lower is better)
Translates to: GFDATTECNRSHSVLFEAGLTAP*LHIFFS
Trigger: TGAGAAGAATATATGCAGCAAAGGTGCTGTGAGCCC...TGCTTCAAAAAGCACTGAATGTGACCTGTTGCATTCAGTTGTAGCATCAAATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp CCTCTACTACAGTCCAGTAGTCTACACTTGCAGAGGCTGAATGCTTCAGCTTTCATTTACTATGGCATCTaGTTTTCTGAAGCTGGTTTC +
Preference number: 5 (lower is better)
Translates to: PLLQSSSLHLQRLNASAFIYYGI*FSEAGF
Trigger: GAAACCAGCTTCAGAAAACAAGATGCCATAGTAAAT...GAAAGCTGAAGCATTCAGCCTCTGCAAGTGTAGACTACTGGACTGTAGTAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp GCTTGTTCCATGCTGAATGAAGCCACCCAACTTTCTAAACAACGTGCTACTGCCAAAACAAACACTTCATaGCCATATGCAACCACAAAC +
Preference number: 5 (lower is better)
Translates to: ACSMLNEATQLSKQRATAKTNTS*PYATTN
Trigger: GTTTGTGGTTGCATATGGCAATGAAGTGTTTGTTTT...GGCAGTAGCACGTTGTTTAGAAAGTTGGGTGGCTTCATTCAGCATGGAACAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS TCA 90 bp TTTAGAGTCACTAAGGAACTGAGGACCTTGTTAAAATTCTGCCCCTaGTACAAATCATTTGCATCAAACGTCTCAGGACTTCAGCACGAC +
Preference number: 5 (lower is better)
Translates to: FRVTKELRTLLKFCP*YKSFASNVSGLQHD
Trigger: GTCGTGCTGAAGTCCTGAGACGTTTGATGCAAATGATTTGTATCAGGGGCAGAATTTTAACAAGGTCCTCAGTTCCTTAGTGACTCTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467053.5
CDS GCA 90 bp AGCAGGCTGCGATACAACAAGCATTTGTTAAGAAAAGCTCAGAAGTaGATTAGTTCTGGTGAGAGATATATGAGCAACAGCTCTTACGAG +
Preference number: 5 (lower is better)
Translates to: SRLRYNKHLLRKAQK*ISSGERYMSNSSYE
Trigger: CTCGTAAGAGCTGTTGCTCATATATCTCTCACCAGAACTAATGCACTTCTGAGCTTTTCTTAACAAATGCTTGTTGTATCGCAGCCTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
ENST00000478679.5
CDS GCA 90 bp GGAACTGAGGACCTTGTTAAAATTCTGCCCCTGATACAAATCATTTaGATCAAACGTAGAAGCAGACAAGAGAATGGTGGTTACCAGATG +
Preference number: 5 (lower is better)
Translates to: GTEDLVKILPLIQII*IKRRSRQENGGYQM
Trigger: CATCTGGTAACCACCATTCTCTTGTCTGCTTCTACGTTTGATGCAAATGATTTGTATCAGGGGCAGAATTTTAACAAGGTCCTCAGTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375741.6
CDS-3UTR CAA 90 bp ACGGTGAAACAGACACAGTTATATACAACAGGGCAGGTTTTTAAAAAGAGTTGCGAAAGCTCGTCCTCATaGGTCTGCTGGAAGTTAAAC +
Preference number: 5 (lower is better)
Translates to: TVKQTQLYTTGQVFKKSCESSSS*VCWKLN
Trigger: GTTTAACTTCCAGCAGACCAATGAGGACGAGCTTTC...GCAACTCTTTTTAAAAACCTGCCCTGTTGTATATAACTGTGTCTGTTTCACCGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CAA 90 bp ACATCTAAGAAAAGCAGGCTGCGATACAACAAGCATTTGTTAAGAAAAGCTCAGGAAAGCTCGTCCTCATaGGTCTGCTGGAAGTTAAAC +
Preference number: 5 (lower is better)
Translates to: TSKKSRLRYNKHLLRKAQESSSS*VCWKLN
Trigger: GTTTAACTTCCAGCAGACCAATGAGGACGAGCTTTC...CTGAGCTTTTCTTAACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp AAAACAGTGTATTTTGTTGTTACTGAACTAGCCTATACAGAACCGTCTGTGTCCGTCGTATCAAATCCTTaGGGAGGGCTCTTCAGTGTT +
Preference number: 5 (lower is better)
Translates to: KTVYFVVTELAYTEPSVSVVSNP*GGLFSV
Trigger: AACACTGAAGAGCCCTCCCAAAGGATTTGATACGAC...GGACACAGACGGTTCTGTATAGGCTAGTTCAGTAACAACAAAATACACTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CAA 90 bp ACATCTAAGAAAAGCAGGCTGCGATACAACAAGCATTTGTTAAGAAAAGCTCAGATGGCCGTAGGTACGTaGAAAGCACAGTCTGAAGTT +
Preference number: 5 (lower is better)
Translates to: TSKKSRLRYNKHLLRKAQMAVGT*KAQSEV
Trigger: AACTTCAGACTGTGCTTTCAACGTACCTACGGCCAT...CTGAGCTTTTCTTAACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
ENST00000478679.5
CDS-3UTR CAA 90 bp ACATCTAAGAAAAGCAGGCTGCGATACAACAAGCATTTGTTAAGAAAAGCTCAGTGTCTCTCGAGCTCTTaGAGCAGCGTAGGGTATTTA +
Preference number: 5 (lower is better)
Translates to: TSKKSRLRYNKHLLRKAQCLSSS*SSVGYL
Trigger: TAAATACCCTACGCTGCTCAAAGAGCTCGAGAGACA...CTGAGCTTTTCTTAACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
ENST00000478679.5
CDS-3UTR CAA 90 bp TTTGTTGTTACTGAACTAGCCTATACAGAACCGTCTGTGTCCTCCCAAAACGCAGGCAGCCATGGATTTTaGAATATCTTGTCTATCTGT +
Preference number: 5 (lower is better)
Translates to: FVVTELAYTEPSVSSQNAGSHGF*NILSIC
Trigger: ACAGATAGACAAGATATTCAAAAATCCATGGCTGCC...TGCGTTTTGGGAGGACACAGACGGTTCTGTATAGGCTAGTTCAGTAACAACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CAA 90 bp AAAACAGTGTATTTTGTTGTTACTGAACTAGCCTATACAGAACCGTCTGTGTCCTGCAGATCCTGCTGGTaGTTGCACGACACTAATATC +
Preference number: 5 (lower is better)
Translates to: KTVYFVVTELAYTEPSVSCRSCW*LHDTNI
Trigger: GATATTAGTGTCGTGCAACAACCAGCAGGATCTGCA...GGACACAGACGGTTCTGTATAGGCTAGTTCAGTAACAACAAAATACACTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CAA 90 bp ACATCTAAGAAAAGCAGGCTGCGATACAACAAGCATTTGTTAAGAAAAGCTCAGTGCAGATCCTGCTGGTaGTTGCACGACACTAATATC +
Preference number: 5 (lower is better)
Translates to: TSKKSRLRYNKHLLRKAQCRSCW*LHDTNI
Trigger: GATATTAGTGTCGTGCAACAACCAGCAGGATCTGCA...CTGAGCTTTTCTTAACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
ENST00000478679.5
CDS-3UTR CAA 90 bp TTGATGCTACAACTGAATGCAACAGGTCACATTCAGTGCTTTTTGAAGCAGAAAGGGCTCACAGCACCTTaGCTGCATATATTCTTCTCA +
Preference number: 5 (lower is better)
Translates to: LMLQLNATGHIQCFLKQKGLTAP*LHIFFS
Trigger: TGAGAAGAATATATGCAGCAAAGGTGCTGTGAGCCC...TTTCTGCTTCAAAAAGCACTGAATGTGACCTGTTGCATTCAGTTGTAGCATCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp ATAGTCAGTCATTCGAATGTATACTCGCATCGGCAGTTAAGCCTCCACAAAGTACTTGGGAACAAATATTaGGAATTAACAGCTGCCCTG +
Preference number: 5 (lower is better)
Translates to: IVSHSNVYSHRQLSLHKVLGNKY*ELTAAL
Trigger: CAGGGCAGCTGTTAATTCCAAATATTTGTTCCCAAG...TACTTTGTGGAGGCTTAACTGCCGATGCGAGTATACATTCGAATGACTGACTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp AAAGGAAACCAAAAGCAAAGTCCCTGTGGTCACCCTTATTTATTGCTGAAGCAGCCTGATACAAATCATTaGCATCAAACGTACGAGAGC +
Preference number: 5 (lower is better)
Translates to: KGNQKQSPCGHPYLLLKQPDTNH*HQTYES
Trigger: GCTCTCGTACGTTTGATGCAAATGATTTGTATCAGG...CTGCTTCAGCAATAAATAAGGGTGACCACAGGGACTTTGCTTTTGGTTTCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426073.6
CDS-3UTR CAA 90 bp AGGCACAATTCAGGGTTGTTTCTCGAGAACACTCATTGGAAAACAATTCACTACAGGCACAATTCAGGGTaGTTTCTCGAGAACACTCAT +
Preference number: 5 (lower is better)
Translates to: RHNSGLFLENTHWKTIHYRHNSG*FLENTH
Trigger: ATGAGTGTTCTCGAGAAACAACCCTGAATTGTGCCT...GTAGTGAATTGTTTTCCAATGAGTGTTCTCGAGAAACAACCCTGAATTGTGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544132.2
CDS TCA 90 bp TTTAGAGTCACTAAGGAACTGAGGACCTTGTTAAAATTCTGCCCCTaGTACAAATCATTTGCATCAAACGTCTTCATAGTGGCAAGGCAG +
Preference number: 5 (lower is better)
Translates to: FRVTKELRTLLKFCP*YKSFASNVFIVARQ
Trigger: CTGCCTTGCCACTATGAAGACGTTTGATGCAAATGATTTGTATCAGGGGCAGAATTTTAACAAGGTCCTCAGTTCCTTAGTGACTCTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426768.2
CDS TCA 90 bp AGGGCACTTATCACGCACTTCCTTCTGCTCTTTAAACACTCCATGTaGAATAAACCTCAGGATTTATCATTTCATTCGTATCTCTGGCTC +
Preference number: 5 (lower is better)
Translates to: RALITHFLLLFKHSM*NKPQDLSFHSYLWL
Trigger: GAGCCAGAGATACGAATGAAATGATAAATCCTGAGGTTTATTTCACATGGAGTGTTTAAAGAGCAGAAGGAAGTGCGTGATAAGTGCCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491688.1
CDS-3UTR CAA 90 bp CCTGCTACAACAGCAAACTCCAATAAACTCAAGTTGAATGGTTTCCCACTGCAAAGACTGTACGAGCATTaGCTGGAAAGAACATATTTC +
Preference number: 5 (lower is better)
Translates to: PATTANSNKLKLNGFPLQRLYEH*LERTYF
Trigger: GAAATATGTTCTTTCCAGCAAATGCTCGTACAGTCT...TTGCAGTGGGAAACCATTCAACTTGAGTTTATTGGAGTTTGCTGTTGTAGCAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CAA 90 bp ACATCTAAGAAAAGCAGGCTGCGATACAACAAGCATTTGTTAAGAAAAGCTCAGTTGTCATTCCTGTCGTaGGAAGCTTTCCCTGATAGA +
Preference number: 5 (lower is better)
Translates to: TSKKSRLRYNKHLLRKAQLSFLS*EAFPDR
Trigger: TCTATCAGGGAAAGCTTCCAACGACAGGAATGACAA...CTGAGCTTTTCTTAACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAGATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
ENST00000478679.5
CDS-3UTR CAA 90 bp GGATTTGATGCTACAACTGAATGCAACAGGTCACATTCAGTGCTTTTTGAAGCACCTTGCCATGTTGAATaGAGTGTTTGCCTTGTTTTG +
Preference number: 5 (lower is better)
Translates to: GFDATTECNRSHSVLFEAPCHVE*SVCLVL
Trigger: CAAAACAAGGCAAACACTCAATTCAACATGGCAAGG...TGCTTCAAAAAGCACTGAATGTGACCTGTTGCATTCAGTTGTAGCATCAAATCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp AAAGGAAACCAAAAGCAAAGTCCCTGTGGTCACCCTTATTTATTGCTGAAGCAGTCCAATAAACTCAAGTaGAATGGTTTCCCACTGCAA +
Preference number: 5 (lower is better)
Translates to: KGNQKQSPCGHPYLLLKQSNKLK*NGFPLQ
Trigger: TTGCAGTGGGAAACCATTCAACTTGAGTTTATTGGA...CTGCTTCAGCAATAAATAAGGGTGACCACAGGGACTTTGCTTTTGGTTTCCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000218789.9
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CAA 90 bp GAAATTGGTCTGAGTGAGGCCAGTGAAAACTCCTTACAACAAATCCCAGGAAAATTTCACTGCAGCTGGTaGCTGAAAATAATGATGTGT +
Preference number: 5 (lower is better)
Translates to: EIGLSEASENSLQQIPGKFHCSW*LKIMMC
Trigger: ACACATCATTATTTTCAGCAACCAGCTGCAGTGAAA...TTTTCCTGGGATTTGTTGTAAGGAGTTTTCACTGGCCTCACTCAGACCAATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp AGGGGAAGGGCTGTTAAAAACACAAGTATTCTTGTGAAATACTTCGATCTGAGCTGTGGAGCAGATTCTTaGCGTGAACTTGAATTGAGT +
Preference number: 5 (lower is better)
Translates to: RGRAVKNTSILVKYFDLSCGADS*RELELS
Trigger: ACTCAATTCAAGTTCACGCAAAGAATCTGCTCCACA...GCTCAGATCGAAGTATTTCACAAGAATACTTGTGTTTTTAACAGCCCTTCCCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375736.8
ENST00000426073.6
CDS-3UTR CAA 90 bp ACATCTAAGAAAAGCAGGCTGCGATACAACAAGCATTTGTTAAGAAAAGCTCAGCCTTGCCATGTTGAATaGAGTGTTTGCCTTGTTTTG +
Preference number: 5 (lower is better)
Translates to: TSKKSRLRYNKHLLRKAQPCHVE*SVCLVL
Trigger: CAAAACAAGGCAAACACTCAATTCAACATGGCAAGG...CTGAGCTTTTCTTAACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAGATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
ENST00000478679.5
CDS-3UTR CAA 90 bp TTGATGCTACAACTGAATGCAACAGGTCACATTCAGTGCTTTTTGAAGCAGAAATCTCTCCACAACTACTaGATCAGTGTTCATAGCACT +
Preference number: 5 (lower is better)
Translates to: LMLQLNATGHIQCFLKQKSLHNY*ISVHST
Trigger: AGTGCTATGAACACTGATCAAGTAGTTGTGGAGAGA...TTTCTGCTTCAAAAAGCACTGAATGTGACCTGTTGCATTCAGTTGTAGCATCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS TCA 90 bp TTTAGAGTCACTAAGGAACTGAGGACCTTGTTAAAATTCTGCCCCTaGTACAAATCATTTGCATCAAACGTAGAAGCAGACAAGAGAATG +
Preference number: 5 (lower is better)
Translates to: FRVTKELRTLLKFCP*YKSFASNVEADKRM
Trigger: CATTCTCTTGTCTGCTTCTACGTTTGATGCAAATGATTTGTATCAGGGGCAGAATTTTAACAAGGTCCTCAGTTCCTTAGTGACTCTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375741.6
CDS CCA 90 bp TTTCTAAAATATTCTGTAGCACCACATTGTAATAGCTTTTGTTTATaGCAGTCGTATCAAATCCTTTGGGAGGGCTCTTCAGTGTTCCTG +
Preference number: 5 (lower is better)
Translates to: FLKYSVAPHCNSFCL*QSYQILWEGSSVFL
Trigger: CAGGAACACTGAAGAGCCCTCCCAAAGGATTTGATACGACTGCCATAAACAAAAGCTATTACAATGTGGTGCTACAGAATATTTTAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000218789.9
ENST00000317133.9
ENST00000375723.5
ENST00000375736.8
ENST00000375739.6
ENST00000375741.6
ENST00000426073.6
ENST00000466143.5
ENST00000646102.2
CDS-3UTR CAA 90 bp ACATCTAAGAAAAGCAGGCTGCGATACAACAAGCATTTGTTAAGAAAAGCTCAGAGACTGTACGAGCATTaGCTGGAAAGAACATATTTC +
Preference number: 5 (lower is better)
Translates to: TSKKSRLRYNKHLLRKAQRLYEH*LERTYF
Trigger: GAAATATGTTCTTTCCAGCAAATGCTCGTACAGTCT...CTGAGCTTTTCTTAACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAGATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
ENST00000478679.5
CDS-3UTR CAA 90 bp TTGATGCTACAACTGAATGCAACAGGTCACATTCAGTGCTTTTTGAAGCAGAAAGGCAGCCATGGATTTTaGAATATCTTGTCTATCTGT +
Preference number: 5 (lower is better)
Translates to: LMLQLNATGHIQCFLKQKGSHGF*NILSIC
Trigger: ACAGATAGACAAGATATTCAAAAATCCATGGCTGCC...TTTCTGCTTCAAAAAGCACTGAATGTGACCTGTTGCATTCAGTTGTAGCATCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp ACATCTAAGAAAAGCAGGCTGCGATACAACAAGCATTTGTTAAGAAAAGCTCAGGGCAGCCATGGATTTTaGAATATCTTGTCTATCTGT +
Preference number: 5 (lower is better)
Translates to: TSKKSRLRYNKHLLRKAQGSHGF*NILSIC
Trigger: ACAGATAGACAAGATATTCAAAAATCCATGGCTGCC...CTGAGCTTTTCTTAACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAGATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
ENST00000478679.5
CDS-3UTR CAA 90 bp ACATCTAAGAAAAGCAGGCTGCGATACAACAAGCATTTGTTAAGAAAAGCTCAGCATTACAATGAGGCATaGTGGTTTTATACTATGGGG +
Preference number: 5 (lower is better)
Translates to: TSKKSRLRYNKHLLRKAQHYNEA*WFYTMG
Trigger: CCCCATAGTATAAAACCACAATGCCTCATTGTAATG...CTGAGCTTTTCTTAACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAGATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp GGATTTGATGCTACAACTGAATGCAACAGGTCACATTCAGTGCTTTTTGAAGCACAGTTCAGTAGCTACTaGGGAACAAATATTTGGAAT +
Preference number: 5 (lower is better)
Translates to: GFDATTECNRSHSVLFEAQFSSY*GTNIWN
Trigger: ATTCCAAATATTTGTTCCCAAGTAGCTACTGAACTG...TGCTTCAAAAAGCACTGAATGTGACCTGTTGCATTCAGTTGTAGCATCAAATCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp TTAAGCCTCCACAAAGTACAATGGGAAATATCAGGAACACTCTCAAAAGTTGTTTGCTCTTACTACCAGTaGATTGTTGCTATTATCGGT +
Preference number: 5 (lower is better)
Translates to: LSLHKVQWEISGTLSKVVCSYYQ*IVAIIG
Trigger: ACCGATAATAGCAACAATCAACTGGTAGTAAGAGCA...AACAACTTTTGAGAGTGTTCCTGATATTTCCCATTGTACTTTGTGGAGGCTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp ACATCTAAGAAAAGCAGGCTGCGATACAACAAGCATTTGTTAAGAAAAGCTCAGCGATACAACAAGCATTaGTTAAGAAAAGCTCAGAAG +
Preference number: 5 (lower is better)
Translates to: TSKKSRLRYNKHLLRKAQRYNKH*LRKAQK
Trigger: CTTCTGAGCTTTTCTTAACAAATGCTTGTTGTATCG...CTGAGCTTTTCTTAACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAGATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
ENST00000478679.5
CDS-3UTR CAA 90 bp TTAAGCCTCCACAAAGTACAATGGGAAATATCAGGAACACTCTCAAAAGTTGTTTTTCACTGCAGCTGGTaGCTGAAAATAATGATGTGT +
Preference number: 5 (lower is better)
Translates to: LSLHKVQWEISGTLSKVVFHCSW*LKIMMC
Trigger: ACACATCATTATTTTCAGCAACCAGCTGCAGTGAAA...AACAACTTTTGAGAGTGTTCCTGATATTTCCCATTGTACTTTGTGGAGGCTTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp TTAAGCCTCCACAAAGTACAATGGGAAATATCAGGAACACTCTCAAAAGTTGTTCATTACAATGAGGCATaGTGGTTTTATACTATGGGG +
Preference number: 5 (lower is better)
Translates to: LSLHKVQWEISGTLSKVVHYNEA*WFYTMG
Trigger: CCCCATAGTATAAAACCACAATGCCTCATTGTAATG...AACAACTTTTGAGAGTGTTCCTGATATTTCCCATTGTACTTTGTGGAGGCTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS-3UTR CAA 90 bp ACATCTAAGAAAAGCAGGCTGCGATACAACAAGCATTTGTTAAGAAAAGCTCAGATTTACTATGGCATCTaGTTTTCTGAAGCTGGTTTC +
Preference number: 5 (lower is better)
Translates to: TSKKSRLRYNKHLLRKAQIYYGI*FSEAGF
Trigger: GAAACCAGCTTCAGAAAACAAGATGCCATAGTAAAT...CTGAGCTTTTCTTAACAAATGCTTGTTGTATCGCAGCCTGCTTTTCTTAGATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
CDS CCA 72 bp ACAGCGGGCGACGCTGGCGAGCGGCCCCCGACGGCCTaGAGCGAGCCCGCTGCCCCAGATGCCAACCCGCTC +
Preference number: 6 (lower is better)
Translates to: TAGDAGERPPTA*SEPAAPDANPL
Trigger: GAGCGGGTTGGCATCTGGGGCAGCGGGCTCGCTCCAGGCCGTCGGGGGCCGCTCGCCAGCGTCGCCCGCTGT
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000218789.9
ENST00000375736.8
CDS GCA 72 bp TGGCGAGCGGCCCCCGACGGCCTGGAGCGAGCCCGCTaGCCCAGATGCCAACCCGCTCAGCCGCTGCTTCTC +
Preference number: 6 (lower is better)
Translates to: WRAAPDGLERAR*PRCQPAQPLLL
Trigger: GAGAAGCAGCGGCTGAGCGGGTTGGCATCTGGGGCAGCGGGCTCGCTCCAGGCCGTCGGGGGCCGCTCGCCA
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000218789.9
CDS CAA 72 bp GCGGGCGTCAGCGGCGCGGGCTTGCTGTCTGCGTGCTaGCTGGACGGAGTGACCGGGTGGGAGGGGAGCTGC +
Preference number: 6 (lower is better)
Translates to: AGVSGAGLLSAC*LDGVTGWEGSC
Trigger: GCAGCTCCCCTCCCACCCGGTCACTCCGTCCAGCAAGCACGCAGACAGCAAGCCCGCGCCGCTGACGCCCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491688.1
CDS GCA 72 bp GCCCCCGACGGCCTGGAGCGAGCCCGCTGCCCCAGATaGCAACCCGCTCAGCCGCTGCTTCTCCTCACCCTT +
Preference number: 6 (lower is better)
Translates to: APDGLERARCPR*QPAQPLLLLTL
Trigger: AAGGGTGAGGAGAAGCAGCGGCTGAGCGGGTTGGCATCTGGGGCAGCGGGCTCGCTCCAGGCCGTCGGGGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000218789.9
CDS CCA 72 bp GGGCCAAACACTAGCTCGCGCCACCTGGGCCGAGCGTaGGGCTCCTCACGGCGTCTGCCCCAGACAGGAGGG +
Preference number: 6 (lower is better)
Translates to: GPNTSSRHLGRA*GSSRRLPQTGG
Trigger: CCCTCCTGTCTGGGGCAGACGCCGTGAGGAGCCCCACGCTCGGCCCAGGTGGCGCGAGCTAGTGTTTGGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491688.1
CDS CAA 72 bp AGGGAAGCCCCGCAGCCGCGCAGGAACTCGCGGATGTaGCTCAGGCACTCGCTCTCGCTCCGGGGCTCGGGG +
Preference number: 6 (lower is better)
Translates to: REAPQPRRNSRM*LRHSLSLRGSG
Trigger: CCCCGAGCCCCGGAGCGAGAGCGAGTGCCTGAGCAACATCCGCGAGTTCCTGCGCGGCTGCGGGGCTTCCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000218789.9
ENST00000317133.9
ENST00000375736.8
ENST00000375741.6
ENST00000466143.5
ENST00000469877.5
ENST00000491775.5
ENST00000646102.2
CDS CCA 72 bp CGGGCGCCTGGCTGCGTCTCGGGGACGCCGAAGATCTaGGCTGTGAAAGCAGCAGGCCGAACCTGGAGAGCC +
Preference number: 6 (lower is better)
Translates to: RAPGCVSGTPKI*AVKAAGRTWRA
Trigger: GGCTCTCCAGGTTCGGCCTGCTGCTTTCACAGCCCAGATCTTCGGCGTCCCCGAGACGCAGCCAGGCGCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483540.1
CDS TCA 72 bp GGCAGGGGCCTGCGCGACTCTGCTCTAGACGGACGGTaGCGCTTCAGACCCTGCCGGGGGAAGGTCAAGGAA +
Preference number: 6 (lower is better)
Translates to: GRGLRDSALDGR*RFRPCRGKVKE
Trigger: TTCCTTGACCTTCCCCCGGCAGGGTCTGAAGCGTCACCGTCCGTCTAGAGCAGAGTCGCGCAGGCCCCTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317133.9
ENST00000483540.1
CDS CAA 90 bp TTTGGGCGACTCCAGCACCCCCAGAGTGATGAGCCACGTAACGGTTaGCTCGGCGGAATTCATCGCTGCGGCCCGGGAGGCAGGCGGGGA +
Preference number: 6 (lower is better)
Translates to: FGRLQHPQSDEPRNG*LGGIHRCGPGGRRG
Trigger: TCCCCGCCTGCCTCCCGGGCCGCAGCGATGAATTCCGCCGAGCAAACCGTTACGTGGCTCATCACTCTGGGGGTGCTGGAGTCGCCCAAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317133.9
ENST00000375739.6
ENST00000375741.6
ENST00000422836.2
ENST00000449979.5
ENST00000646102.2
CDS CAA 72 bp CTCCAGCACCCCCAGAGTGATGAGCCACGTAACGGTTaGCTCGGCGGAATTCATCGCTGCGGCCCGGGAGGC +
Preference number: 6 (lower is better)
Translates to: LQHPQSDEPRNG*LGGIHRCGPGG
Trigger: GCCTCCCGGGCCGCAGCGATGAATTCCGCCGAGCAAACCGTTACGTGGCTCATCACTCTGGGGGTGCTGGAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317133.9
ENST00000375739.6
ENST00000375741.6
ENST00000422836.2
ENST00000449979.5
ENST00000646102.2
CDS GCA 72 bp TCCAGCACCCCCAGAGTGATGAGCCACGTAACGGTTTaGTCGGCGGAATTCATCGCTGCGGCCCGGGAGGCA +
Preference number: 6 (lower is better)
Translates to: SSTPRVMSHVTV*SAEFIAAAREA
Trigger: TGCCTCCCGGGCCGCAGCGATGAATTCCGCCGAGCAAACCGTTACGTGGCTCATCACTCTGGGGGTGCTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317133.9
ENST00000375739.6
ENST00000375741.6
ENST00000422836.2
ENST00000449979.5
ENST00000646102.2
CDS CCA 72 bp TCCAGAGATTCGGGTCAGGGTTCACACGCTCCAGCCTaGGAACCACCAGCCGGAAGGGAGAAGCAGTGCCTG +
Preference number: 6 (lower is better)
Translates to: SRDSGQGSHAPA*EPPAGREKQCL
Trigger: CAGGCACTGCTTCTCCCTTCCGGCTGGTGGTTCCCAGGCTGGAGCGTGTGAACCCTGACCCGAATCTCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422836.2
CDS TCA 72 bp GCTGCCAAGGGCACAGAGCGGGAAGGGCAGAGAACATaGGACTCGCGTGCTCACCGCGAAAGGGCACTTATC +
Preference number: 6 (lower is better)
Translates to: AAKGTEREGQRT*DSRAHRERALI
Trigger: GATAAGTGCCCTTTCGCGGTGAGCACGCGAGTCTCATGTTCTCTGCCCTTCCCGCTCTGTGCCCTTGGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491688.1
CDS GCA 72 bp CCAAATGTGTCTGCTGGCAGGCATGCCTTTCAACCCTaGAGGCAGGACCTCAGACCCCGGACTTCCCGGTTC +
Preference number: 6 (lower is better)
Translates to: PNVSAGRHAFQP*RQDLRPRTSRF
Trigger: GAACCGGGAAGTCCGGGGTCTGAGGTCCTGCCTGCAGGGTTGAAAGGCATGCCTGCCAGCAGACACATTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS GCA 72 bp CACACTCTGGCTCCCAAATGTGTCTGCTGGCAGGCATaGCTTTCAACCCTGCAGGCAGGACCTCAGACCCCG +
Preference number: 6 (lower is better)
Translates to: HTLAPKCVCWQA*LSTLQAGPQTP
Trigger: CGGGGTCTGAGGTCCTGCCTGCAGGGTTGAAAGGCATGCCTGCCAGCAGACACATTTGGGAGCCAGAGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS CCA 72 bp ACCCCGGACTTCCCGGTTCCACCTCCATGCAGTCTCTaGGTGTGCCTCCACCTTCATGAGCACTGCTTTCCG +
Preference number: 6 (lower is better)
Translates to: TPDFPVPPPCSL*VCLHLHEHCFP
Trigger: CGGAAAGCAGTGCTCATGAAGGTGGAGGCACACCCAGAGACTGCATGGAGGTGGAACCGGGAAGTCCGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS CCA 72 bp ACCACCTTTCTTCCCCTCCTCGTCTTCTGCACGCTCTaGCTGCTGCAGGACCCCATGAGACCTCACAGCCTG +
Preference number: 6 (lower is better)
Translates to: TTFLPLLVFCTL*LLQDPMRPHSL
Trigger: CAGGCTGTGAGGTCTCATGGGGTCCTGCAGCAGCCAGAGCGTGCAGAAGACGAGGAGGGGAAGAAAGGTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000478679.5
ENST00000483189.1
CDS TCA 72 bp ACCTCCATGCAGTCTCTGGGTGTGCCTCCACCTTCATaGGCACTGCTTTCCGCTCCGCGGCTAAGTACTGGC +
Preference number: 6 (lower is better)
Translates to: TSMQSLGVPPPS*ALLSAPRLSTG
Trigger: GCCAGTACTTAGCCGCGGAGCGGAAAGCAGTGCTCATGAAGGTGGAGGCACACCCAGAGACTGCATGGAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS CAA 90 bp AGCTCTTTGAGCAGCGTAGGGTATTTATCCAGGCGCATGAAGGGTTaGCTCAGGCCCGTGGTCAGCACGAGAATCCCAGGGCTGCTGGCA +
Preference number: 6 (lower is better)
Translates to: SSLSSVGYLSRRMKG*LRPVVSTRIPGLLA
Trigger: TGCCAGCAGCCCTGGGATTCTCGTGCTGACCACGGGCCTGAGCAAACCCTTCATGCGCCTGGATAAATACCCTACGCTGCTCAAAGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000218789.9
ENST00000317133.9
ENST00000375723.5
ENST00000375736.8
ENST00000375739.6
ENST00000375741.6
ENST00000426073.6
ENST00000466143.5
ENST00000478679.5
ENST00000483189.1
ENST00000646102.2
CDS TCA 72 bp AGCAGCTGTGCTTTTCCGGGACGCGAACTCCTCATCTaGAGGCTTCCGTTCAGGTTTGCGCTTGGGCAGCAG +
Preference number: 6 (lower is better)
Translates to: SSCAFPGRELLI*RLPFRFALGQQ
Trigger: CTGCTGCCCAAGCGCAAACCTGAACGGAAGCCTTCAGATGAGGAGTTCGCGTCCCGGAAAAGCACAGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000218789.9
ENST00000317133.9
ENST00000375723.5
ENST00000375736.8
ENST00000375739.6
ENST00000375741.6
ENST00000426073.6
ENST00000478679.5
ENST00000646102.2
CDS GCA 72 bp CCGAGAGGTCTGAAGGCTCCAAACGAGAAAGGCTACTaGGACGCCCCAGGGAGTCTAGGCTTGGTTGGTCAT +
Preference number: 6 (lower is better)
Translates to: PRGLKAPNEKGY*DAPGSLGLVGH
Trigger: ATGACCAACCAAGCCTAGACTCCCTGGGGCGTCGCAGTAGCCTTTCTCGTTTGGAGCCTTCAGACCTCTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000218789.9
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
ENST00000478679.5
ENST00000646102.2
CDS GCA 72 bp CACAGAGCGGGAAGGGCAGAGAACATGAGACTCGCGTaGTCACCGCGAAAGGGCACTTATCACGCACTTCCT +
Preference number: 6 (lower is better)
Translates to: HRAGRAENMRLA*SPRKGTYHALP
Trigger: AGGAAGTGCGTGATAAGTGCCCTTTCGCGGTGAGCACGCGAGTCTCATGTTCTCTGCCCTTCCCGCTCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491688.1
CDS CCA 72 bp AGACCACAGCACACTCTGGCTCCCAAATGTGTCTGCTaGCAGGCATGCCTTTCAACCCTGCAGGCAGGACCT +
Preference number: 6 (lower is better)
Translates to: RPQHTLAPKCVC*QACLSTLQAGP
Trigger: AGGTCCTGCCTGCAGGGTTGAAAGGCATGCCTGCCAGCAGACACATTTGGGAGCCAGAGTGTGCTGTGGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS CCA 72 bp TCACTTGCTGACAGCTCAGCCACGGGATGCCACGCCTaGAGTCTGGAAGGAGGAGAAGCACCAAGTCCTTAC +
Preference number: 6 (lower is better)
Translates to: SLADSSATGCHA*SLEGGEAPSPY
Trigger: GTAAGGACTTGGTGCTTCTCCTCCTTCCAGACTCCAGGCGTGGCATCCCGTGGCTGAGCTGTCAGCAAGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544132.2
CDS TCA 72 bp ACAGAAATGATGGTTCCATCTGAAGCCATATGGGTCTaGATCGGGAGGAACCGACTCTCCGGAGCGCGGCGC +
Preference number: 6 (lower is better)
Translates to: TEMMVPSEAIWV*IGRNRLSGARR
Trigger: GCGCCGCGCTCCGGAGAGTCGGTTCCTCCCGATTCAGACCCATATGGCTTCAGATGGAACCATCATTTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317133.9
ENST00000483540.1
CDS TCA 72 bp ACGTCTCAGGACTTCAGCACGACAGCCCCTTCTTCCTaGTGGGAAGCTCAGCACCCAGACCCCTCTCTAATT +
Preference number: 6 (lower is better)
Translates to: TSQDFSTTAPSS*WEAQHPDPSLI
Trigger: AATTAGAGAGGGGTCTGGGTGCTGAGCTTCCCATCAGGAAGAAGGGGCTGTCGTGCTGAAGTCCTGAGACGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467053.5
CDS CCA 72 bp TTCTGCTATGAGCTCCTAAGAGTGGGACAGAAACCCTaGTGCGTGCATGTGGGCAGCAGTACCTCACTTCCG +
Preference number: 6 (lower is better)
Translates to: FCYELLRVGQKP*CVHVGSSTSLP
Trigger: CGGAAGTGAGGTACTGCTGCCCACATGCACGCACCAGGGTTTCTGTCCCACTCTTAGGAGCTCATAGCAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483189.1
CDS CCA 72 bp TTTCATTCGTATCTCTGGCTCTCAGCAGTCAGTTTTTaGGGCCAAACACTAGCTCGCGCCACCTGGGCCGAG +
Preference number: 6 (lower is better)
Translates to: FHSYLWLSAVSF*GQTLARATWAE
Trigger: CTCGGCCCAGGTGGCGCGAGCTAGTGTTTGGCCCCAAAAACTGACTGCTGAGAGCCAGAGATACGAATGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491688.1
CDS CAA 90 bp GCTCCAAACGAGAAAGGCTACTGCGACGCCCCAGGGAGTCTAGGCTaGGTTGGTCATCATCAGCCAAGACGTGATTATGCATCAGGTCAG +
Preference number: 6 (lower is better)
Translates to: APNEKGYCDAPGSLG*VGHHQPRRDYASGQ
Trigger: CTGACCTGATGCATAATCACGTCTTGGCTGATGATGACCAACCAAGCCTAGACTCCCTGGGGCGTCGCAGTAGCCTTTCTCGTTTGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000218789.9
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
ENST00000478679.5
ENST00000646102.2
CDS CAA 72 bp GAGAAAGGCTACTGCGACGCCCCAGGGAGTCTAGGCTaGGTTGGTCATCATCAGCCAAGACGTGATTATGCA +
Preference number: 6 (lower is better)
Translates to: EKGYCDAPGSLG*VGHHQPRRDYA
Trigger: TGCATAATCACGTCTTGGCTGATGATGACCAACCAAGCCTAGACTCCCTGGGGCGTCGCAGTAGCCTTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000218789.9
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
ENST00000478679.5
ENST00000646102.2
CDS CAA 72 bp AGAAACTCTCCTGCCTCCTCGGCCCTGCTGGCCGGCTaGTGGGCGATGAAAACAAACTTTAATCACTTCCAG +
Preference number: 6 (lower is better)
Translates to: RNSPASSALLAG*WAMKTNFNHFQ
Trigger: CTGGAAGTGATTAAAGTTTGTTTTCATCGCCCACAAGCCGGCCAGCAGGGCCGAGGAGGCAGGAGAGTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422836.2
CDS CAA 72 bp ATTTCATTCGTATCTCTGGCTCTCAGCAGTCAGTTTTaGGGGCCAAACACTAGCTCGCGCCACCTGGGCCGA +
Preference number: 6 (lower is better)
Translates to: ISFVSLALSSQF*GPNTSSRHLGR
Trigger: TCGGCCCAGGTGGCGCGAGCTAGTGTTTGGCCCCAAAAACTGACTGCTGAGAGCCAGAGATACGAATGAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491688.1
CDS CAA 90 bp CGGGACGCGAACTCCTCATCTGAAGGCTTCCGTTCAGGTTTGCGCTaGGGCAGCAGCTTTTTCATGGTCTTAGGGCTCTTACTAAGATCC +
Preference number: 6 (lower is better)
Translates to: RDANSSSEGFRSGLR*GSSFFMVLGLLLRS
Trigger: GGATCTTAGTAAGAGCCCTAAGACCATGAAAAAGCTGCTGCCCAAGCGCAAACCTGAACGGAAGCCTTCAGATGAGGAGTTCGCGTCCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000218789.9
ENST00000317133.9
ENST00000375723.5
ENST00000375736.8
ENST00000375739.6
ENST00000375741.6
ENST00000426073.6
ENST00000478679.5
ENST00000491688.1
ENST00000646102.2
CDS TCA 72 bp CCATATACTGTCATAGTCAGAGTCTTCCGAGAGGTCTaGAGGCTCCAAACGAGAAAGGCTACTGCGACGCCC +
Preference number: 6 (lower is better)
Translates to: PYTVIVRVFREV*RLQTRKATATP
Trigger: GGGCGTCGCAGTAGCCTTTCTCGTTTGGAGCCTTCAGACCTCTCGGAAGACTCTGACTATGACAGTATATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000218789.9
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
ENST00000478679.5
ENST00000646102.2
CDS TCA 72 bp GGGCTTCGGGCCACACTGACTTCAGCTGGATCAAACTaGTCAACAAGTCCACACTCAGCTCTAAGCCTCTCT +
Preference number: 6 (lower is better)
Translates to: GLRATLTSAGSN*STSPHSALSLS
Trigger: AGAGAGGCTTAGAGCTGAGTGTGGACTTGTTGATCAGTTTGATCCAGCTGAAGTCAGTGTGGCCCGAAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483189.1
CDS GCA 72 bp CCCCAACTCCTCACTGTGTTCCGTGAGGACATTCACTaGAGAAGGGTGATTGGCACAATACGTGAGGTACAG +
Preference number: 6 (lower is better)
Translates to: PQLLTVFREDIH*RRVIGTIREVQ
Trigger: CTGTACCTCACGTATTGTGCCAATCACCCTTCTGCAGTGAATGTCCTCACGGAACACAGTGAGGAGTTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000218789.9
ENST00000317133.9
ENST00000375723.5
ENST00000375736.8
ENST00000375739.6
ENST00000375741.6
ENST00000426073.6
ENST00000466143.5
ENST00000478679.5
ENST00000483189.1
ENST00000646102.2
CDS CAA 72 bp TTTCAAGGTGGCGGGGACAGGCTGAAAACGAGACGTTaGTTTCGCTTTGCTACCTTGCAAGCCGGTCATGAC +
Preference number: 6 (lower is better)
Translates to: FQGGGDRLKTRR*FRFATLQAGHD
Trigger: GTCATGACCGGCTTGCAAGGTAGCAAAGCGAAACAAACGTCTCGTTTTCAGCCTGTCCCCGCCACCTTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317133.9
ENST00000483540.1
CDS CAA 90 bp GGCGGGGACAGGCTGAAAACGAGACGTTTGTTTCGCTTTGCTACCTaGCAAGCCGGTCATGACGGAACAGAAATGATGGTTCCATCTGAA +
Preference number: 6 (lower is better)
Translates to: GGDRLKTRRLFRFAT*QAGHDGTEMMVPSE
Trigger: TTCAGATGGAACCATCATTTCTGTTCCGTCATGACCGGCTTGCAAGGTAGCAAAGCGAAACAAACGTCTCGTTTTCAGCCTGTCCCCGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317133.9
ENST00000483540.1
CDS CAA 90 bp ATCGTTTTTAGAAACTCTCCTGCCTCCTCGGCCCTGCTGGCCGGCTaGTGGGCGATGAAAACAAACTTTAATCACTTCCAGAGATTCGGG +
Preference number: 6 (lower is better)
Translates to: IVFRNSPASSALLAG*WAMKTNFNHFQRFG
Trigger: CCCGAATCTCTGGAAGTGATTAAAGTTTGTTTTCATCGCCCACAAGCCGGCCAGCAGGGCCGAGGAGGCAGGAGAGTTTCTAAAAACGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422836.2
CDS TCA 72 bp CTCTTCCACACGGGTGACATGGATGACGTCTCCTTTTaGGAAGGAAAGCTCGTCCTCATTGGTCTGCTGGAA +
Preference number: 6 (lower is better)
Translates to: LFHTGDMDDVSF*EGKLVLIGLLE
Trigger: TTCCAGCAGACCAATGAGGACGAGCTTTCCTTCTCAAAAGGAGACGTCATCCATGTCACCCGTGTGGAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000218789.9
ENST00000317133.9
ENST00000375723.5
ENST00000375736.8
ENST00000375739.6
ENST00000375741.6
ENST00000426073.6
ENST00000426768.2
ENST00000449979.5
ENST00000466143.5
ENST00000467053.5
ENST00000469877.5
ENST00000646102.2
CDS TCA 72 bp GGAGAAGCACCAAGTCCTTACGGTATGAGATGGCACTaGATGAGGCTTTATGGTGGGGTTTCCCACAGACGT +
Preference number: 6 (lower is better)
Translates to: GEAPSPYGMRWH*MRLYGGVSHRR
Trigger: ACGTCTGTGGGAAACCCCACCATAAAGCCTCATTCAGTGCCATCTCATACCGTAAGGACTTGGTGCTTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544132.2
CDS TCA 72 bp ATCTATCCTTCAGTTCACGTGGGCTTCGGGCCACACTaGCTTCAGCTGGATCAAACTGATCAACAAGTCCAC +
Preference number: 6 (lower is better)
Translates to: IYPSVHVGFGPH*LQLDQTDQQVH
Trigger: GTGGACTTGTTGATCAGTTTGATCCAGCTGAAGTCAGTGTGGCCCGAAGCCCACGTGAACTGAAGGATAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483189.1
CDS GCA 72 bp GCATACAGCTCCATGCGGATGTGTGCACAGGACTCCTaGAAGTCTTTCTGCACACTATCTATCCTTCAGTTC +
Preference number: 6 (lower is better)
Translates to: AYSSMRMCAQDS*KSFCTLSILQF
Trigger: GAACTGAAGGATAGATAGTGTGCAGAAAGACTTGCAGGAGTCCTGTGCACACATCCGCATGGAGCTGTATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483189.1
CDS CAA 72 bp AACTCCTCATCTGAAGGCTTCCGTTCAGGTTTGCGCTaGGGCAGCAGCTTTTTCATGGTCTTAGGGCTCTTA +
Preference number: 6 (lower is better)
Translates to: NSSSEGFRSGLR*GSSFFMVLGLL
Trigger: TAAGAGCCCTAAGACCATGAAAAAGCTGCTGCCCAAGCGCAAACCTGAACGGAAGCCTTCAGATGAGGAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000218789.9
ENST00000317133.9
ENST00000375723.5
ENST00000375736.8
ENST00000375739.6
ENST00000375741.6
ENST00000426073.6
ENST00000478679.5
ENST00000491688.1
ENST00000646102.2
CDS CAA 90 bp TGCTTCTGTAGGTGCTCCACCCATTCCTGCAGATCCTGCTGGTTGTaGCACGACACTAATATCCGCTCAATCATGCTCCCTGATATTTCA +
Preference number: 6 (lower is better)
Translates to: CFCRCSTHSCRSCWL*HDTNIRSIMLPDIS
Trigger: TGAAATATCAGGGAGCATGATTGAGCGGATATTAGTGTCGTGCAACAACCAGCAGGATCTGCAGGAATGGGTGGAGCACCTACAGAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000218789.9
ENST00000317133.9
ENST00000375723.5
ENST00000375736.8
ENST00000375739.6
ENST00000375741.6
ENST00000426073.6
ENST00000466143.5
ENST00000478679.5
ENST00000544132.2
ENST00000646102.2
CDS CAA 90 bp GTTTGCTTCTGTAGGTGCTCCACCCATTCCTGCAGATCCTGCTGGTaGTTGCACGACACTAATATCCGCTCAATCATGCTCCCTGATATT +
Preference number: 6 (lower is better)
Translates to: VCFCRCSTHSCRSCW*LHDTNIRSIMLPDI
Trigger: AATATCAGGGAGCATGATTGAGCGGATATTAGTGTCGTGCAACAACCAGCAGGATCTGCAGGAATGGGTGGAGCACCTACAGAAGCAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000218789.9
ENST00000317133.9
ENST00000375723.5
ENST00000375736.8
ENST00000375739.6
ENST00000375741.6
ENST00000426073.6
ENST00000466143.5
ENST00000478679.5
ENST00000544132.2
ENST00000646102.2
CDS TCA 72 bp TCACTGTGTTCCGTGAGGACATTCACTGCAGAAGGGTaGTTGGCACAATACGTGAGGTACAGGGTTTTCATC +
Preference number: 6 (lower is better)
Translates to: SLCSVRTFTAEG*LAQYVRYRVFI
Trigger: GATGAAAACCCTGTACCTCACGTATTGTGCCAATCACCCTTCTGCAGTGAATGTCCTCACGGAACACAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000218789.9
ENST00000317133.9
ENST00000375723.5
ENST00000375736.8
ENST00000375739.6
ENST00000375741.6
ENST00000426073.6
ENST00000466143.5
ENST00000478679.5
ENST00000483189.1
ENST00000646102.2
CDS TCA 72 bp GAGTCTAGGCTTGGTTGGTCATCATCAGCCAAGACGTaGTTATGCATCAGGTCAGTGCCTTGCCATGTTGAA +
Preference number: 6 (lower is better)
Translates to: ESRLGWSSSAKT*LCIRSVPCHVE
Trigger: TTCAACATGGCAAGGCACTGACCTGATGCATAATCACGTCTTGGCTGATGATGACCAACCAAGCCTAGACTC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000218789.9
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
ENST00000478679.5
ENST00000646102.2
CDS CCA 72 bp AAGTCTTTCTGCACACTATCTATCCTTCAGTTCACGTaGGCTTCGGGCCACACTGACTTCAGCTGGATCAAA +
Preference number: 6 (lower is better)
Translates to: KSFCTLSILQFT*ASGHTDFSWIK
Trigger: TTTGATCCAGCTGAAGTCAGTGTGGCCCGAAGCCCACGTGAACTGAAGGATAGATAGTGTGCAGAAAGACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483189.1
CDS GCA 72 bp CTCACCGCGAAAGGGCACTTATCACGCACTTCCTTCTaGTCTTTAAACACTCCATGTGAAATAAACCTCAGG +
Preference number: 6 (lower is better)
Translates to: LTAKGHLSRTSF*SLNTPCEINLR
Trigger: CCTGAGGTTTATTTCACATGGAGTGTTTAAAGAGCAGAAGGAAGTGCGTGATAAGTGCCCTTTCGCGGTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491688.1
CDS CCA 72 bp CTATTATCGGTCATGTCCAAACTCCGATACTGGCCCTaGAACAGTTTTGAAGTCCGAGTGTGCAAAGACTGT +
Preference number: 6 (lower is better)
Translates to: LLSVMSKLRYWP*NSFEVRVCKDC
Trigger: ACAGTCTTTGCACACTCGGACTTCAAAACTGTTCCAGGGCCAGTATCGGAGTTTGGACATGACCGATAATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000218789.9
ENST00000317133.9
ENST00000375723.5
ENST00000375736.8
ENST00000375739.6
ENST00000375741.6
ENST00000426073.6
ENST00000426768.2
ENST00000449979.5
ENST00000466143.5
ENST00000467053.5
ENST00000491775.5
ENST00000646102.2
CDS CAA 72 bp AGGCTGAAAACGAGACGTTTGTTTCGCTTTGCTACCTaGCAAGCCGGTCATGACGGAACAGAAATGATGGTT +
Preference number: 6 (lower is better)
Translates to: RLKTRRLFRFAT*QAGHDGTEMMV
Trigger: AACCATCATTTCTGTTCCGTCATGACCGGCTTGCAAGGTAGCAAAGCGAAACAAACGTCTCGTTTTCAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317133.9
ENST00000483540.1
CDS TCA 72 bp ACTAAGGAACTGAGGACCTTGTTAAAATTCTGCCCCTaGTACAAATCATTTGCATCAAACGTCTCCAGCCGC +
Preference number: 6 (lower is better)
Translates to: TKELRTLLKFCP*YKSFASNVSSR
Trigger: GCGGCTGGAGACGTTTGATGCAAATGATTTGTATCAGGGGCAGAATTTTAACAAGGTCCTCAGTTCCTTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000218789.9
ENST00000317133.9
ENST00000375736.8
ENST00000466143.5
ENST00000469877.5
ENST00000491775.5
ENST00000646102.2
CDS CAA 72 bp ATGACGTCTCCTTTTGAGAAGGAAAGCTCGTCCTCATaGGTCTGCTGGAAGTTAAACTTTGCTCTTACTACC +
Preference number: 6 (lower is better)
Translates to: MTSPFEKESSSS*VCWKLNFALTT
Trigger: GGTAGTAAGAGCAAAGTTTAACTTCCAGCAGACCAATGAGGACGAGCTTTCCTTCTCAAAAGGAGACGTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000218789.9
ENST00000317133.9
ENST00000375723.5
ENST00000375736.8
ENST00000375739.6
ENST00000375741.6
ENST00000426073.6
ENST00000426768.2
ENST00000449979.5
ENST00000466143.5
ENST00000467053.5
ENST00000469877.5
ENST00000491775.5
ENST00000646102.2
CDS TCA 72 bp AATACCATCCAATTGGTGATCATCTGTAGTAACAGATaGTCTGGGGAAACACATTCAGACCACAGCACACTC +
Preference number: 6 (lower is better)
Translates to: NTIQLVIICSNR*SGETHSDHSTL
Trigger: GAGTGTGCTGTGGTCTGAATGTGTTTCCCCAGATCATCTGTTACTACAGATGATCACCAATTGGATGGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS CCA 72 bp AATAGCTTTTGTTTATGGCAGTCGTATCAAATCCTTTaGGAGGGCTCTTCAGTGTTCCTGATTTGGGAGACA +
Preference number: 6 (lower is better)
Translates to: NSFCLWQSYQIL*EGSSVFLIWET
Trigger: TGTCTCCCAAATCAGGAACACTGAAGAGCCCTCCCAAAGGATTTGATACGACTGCCATAAACAAAAGCTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000218789.9
ENST00000317133.9
ENST00000375723.5
ENST00000375736.8
ENST00000375739.6
ENST00000375741.6
ENST00000426073.6
ENST00000466143.5
ENST00000469877.5
ENST00000646102.2
CDS TCA 72 bp GTCTGCTGGAAGTTAAACTTTGCTCTTACTACCAGTTaGTTGTTGCTATTATCGGTCATGTCCAAACTCCGA +
Preference number: 6 (lower is better)
Translates to: VCWKLNFALTTS*LLLLSVMSKLR
Trigger: TCGGAGTTTGGACATGACCGATAATAGCAACAATCAACTGGTAGTAAGAGCAAAGTTTAACTTCCAGCAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000218789.9
ENST00000317133.9
ENST00000375723.5
ENST00000375736.8
ENST00000375739.6
ENST00000375741.6
ENST00000426073.6
ENST00000426768.2
ENST00000449979.5
ENST00000466143.5
ENST00000467053.5
ENST00000491775.5
ENST00000646102.2
CDS TCA 72 bp AAGCTCAGAAGTGCATTAGTTCTGGTGAGAGATATATaGGCAACAGCTCTTACGAGATGTAGAACCCATTCT +
Preference number: 6 (lower is better)
Translates to: KLRSALVLVRDI*ATALTRCRTHS
Trigger: AGAATGGGTTCTACATCTCGTAAGAGCTGTTGCTCATATATCTCTCACCAGAACTAATGCACTTCTGAGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317133.9
ENST00000375723.5
ENST00000375739.6
ENST00000375741.6
ENST00000478679.5
CDS TCA 72 bp GTCTGCTGGAAGTTAAACTTTGCTCTTACTACCAGTTaGTTGTTGCTATTATCGGTCATGTCCTGCTGTTAC +
Preference number: 6 (lower is better)
Translates to: VCWKLNFALTTS*LLLLSVMSCCY
Trigger: GTAACAGCAGGACATGACCGATAATAGCAACAATCAACTGGTAGTAAGAGCAAAGTTTAACTTCCAGCAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469877.5
CDS GCA 72 bp AAGCTCGTCCTCATTGGTCTGCTGGAAGTTAAACTTTaGTCTTACTACCAGTTGATTGTTGCTATTATCGGT +
Preference number: 6 (lower is better)
Translates to: KLVLIGLLEVKL*SYYQLIVAIIG
Trigger: ACCGATAATAGCAACAATCAACTGGTAGTAAGAGCAAAGTTTAACTTCCAGCAGACCAATGAGGACGAGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000218789.9
ENST00000317133.9
ENST00000375723.5
ENST00000375736.8
ENST00000375739.6
ENST00000375741.6
ENST00000426073.6
ENST00000426768.2
ENST00000449979.5
ENST00000466143.5
ENST00000467053.5
ENST00000469877.5
ENST00000491775.5
ENST00000646102.2
CDS TCA 72 bp ACTAAGGAACTGAGGACCTTGTTAAAATTCTGCCCCTaGTACAAATCATTTGCATCAAACGTAGAAGCAGAC +
Preference number: 6 (lower is better)
Translates to: TKELRTLLKFCP*YKSFASNVEAD
Trigger: GTCTGCTTCTACGTTTGATGCAAATGATTTGTATCAGGGGCAGAATTTTAACAAGGTCCTCAGTTCCTTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375741.6
CDS TCA 72 bp ACTAAGGAACTGAGGACCTTGTTAAAATTCTGCCCCTaGTACAAATCATTTGCATCAAACGTACGAGAGCAA +
Preference number: 6 (lower is better)
Translates to: TKELRTLLKFCP*YKSFASNVREQ
Trigger: TTGCTCTCGTACGTTTGATGCAAATGATTTGTATCAGGGGCAGAATTTTAACAAGGTCCTCAGTTCCTTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426073.6
CDS TCA 72 bp ACTAAGGAACTGAGGACCTTGTTAAAATTCTGCCCCTaGTACAAATCATTTGCATCAAACGTCTCAGGACTT +
Preference number: 6 (lower is better)
Translates to: TKELRTLLKFCP*YKSFASNVSGL
Trigger: AAGTCCTGAGACGTTTGATGCAAATGATTTGTATCAGGGGCAGAATTTTAACAAGGTCCTCAGTTCCTTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467053.5
CDS CCA 72 bp TATTCTGTAGCACCACATTGTAATAGCTTTTGTTTATaGCAGTCGTATCAAATCCTTTGGGAGGGCTCTTCA +
Preference number: 6 (lower is better)
Translates to: YSVAPHCNSFCL*QSYQILWEGSS
Trigger: TGAAGAGCCCTCCCAAAGGATTTGATACGACTGCCATAAACAAAAGCTATTACAATGTGGTGCTACAGAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000218789.9
ENST00000317133.9
ENST00000375723.5
ENST00000375736.8
ENST00000375739.6
ENST00000375741.6
ENST00000426073.6
ENST00000466143.5
ENST00000646102.2
CDS CCA 72 bp AATAAACCTCAGGATTTATCATTTCATTCGTATCTCTaGCTCTCAGCAGTCAGTTTTTGGGGCCAAACACTA +
Preference number: 6 (lower is better)
Translates to: NKPQDLSFHSYL*LSAVSFWGQTL
Trigger: TAGTGTTTGGCCCCAAAAACTGACTGCTGAGAGCCAGAGATACGAATGAAATGATAAATCCTGAGGTTTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491688.1
CDS TCA 72 bp ACTAAGGAACTGAGGACCTTGTTAAAATTCTGCCCCTaGTACAAATCATTTGCATCAAACGTCTTCATAGTG +
Preference number: 6 (lower is better)
Translates to: TKELRTLLKFCP*YKSFASNVFIV
Trigger: CACTATGAAGACGTTTGATGCAAATGATTTGTATCAGGGGCAGAATTTTAACAAGGTCCTCAGTTCCTTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426768.2
CDS CAA 72 bp AAGGTTTTTGAAGGCAGCCATGGATTTTTGAATATCTaGTCTATCTGTATGATAATCCTCCATGTGTCTCTC +
Preference number: 6 (lower is better)
Translates to: KVFEGSHGFLNI*SICMIILHVSL
Trigger: GAGAGACACATGGAGGATTATCATACAGATAGACAAGATATTCAAAAATCCATGGCTGCCTTCAAAAACCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENST00000218789.9
ENST00000317133.9
ENST00000375723.5
ENST00000375736.8
ENST00000375739.6
ENST00000375741.6
ENST00000426073.6
ENST00000466143.5
ENST00000478679.5
ENST00000483189.1
ENST00000646102.2
CDS TCA 72 bp ATCACGCACTTCCTTCTGCTCTTTAAACACTCCATGTaGAATAAACCTCAGGATTTATCATTTCATTCGTAT +
Preference number: 6 (lower is better)
Translates to: ITHFLLLFKHSM*NKPQDLSFHSY
Trigger: ATACGAATGAAATGATAAATCCTGAGGTTTATTTCACATGGAGTGTTTAAAGAGCAGAAGGAAGTGCGTGAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491688.1