RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ANO4 (Homo sapiens)

Ensembl gene IDs: ENSG00000151572

Ensembl transcript IDs: ENST00000392977.8, ENST00000392979.7, ENST00000546991.1, ENST00000548940.1, ENST00000549155.6, ENST00000549234.1, ENST00000550015.1, ENST00000551148.1, ENST00000570509.4, ENST00000573650.8, ENST00000575847.8, ENST00000644049.1

Found 580 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCCAGTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTaGAACATGCACTGTGGTTGCATTTTTAGTCATTCACTTGAGTGT +
Preference number: 1 (lower is better)
Translates to: ASPLLDAAPPAAAGI*NMHCGCIFSHSLEC
Trigger: ACACTCAAGTGAATGACTAAAAATGCAACCACAGTGCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
3UTR CCA 90 bp GTAACTGCCCATAATGTGCATGCTTGCTTGGTCAAGAATGGTCTATaGATAGATAGCAATTGTGCGCTGGACTGCAACGTGATTTCACAG +
Preference number: 1 (lower is better)
Translates to: VTAHNVHACLVKNGL*IDSNCALDCNVISQ
Trigger: CTGTGAAATCACGTTGCAGTCCAGCGCACAATTGCTATCTATCCATAGACCATTCTTGACCAAGCAAGCATGCACATTATGGGCAGTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
3UTR-3UTR CCA 90 bp CTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGCACTGTGGTTGCTTCAGGTCCTTGGCCTaGAAAGGGACTATTTTATGG +
Preference number: 2 (lower is better)
Translates to: LDAAPPAAAGICNMHCGCFRSLA*KGTILW
Trigger: CCATAAAATAGTCCCTTTCCAGGCCAAGGACCTGAA...GCAACCACAGTGCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
3UTR-3UTR CCA 90 bp CTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGCACTGTGGTTGCCAGAATTCAGGTCCTTaGCCTGGAAAGGGACTATTT +
Preference number: 2 (lower is better)
Translates to: LDAAPPAAAGICNMHCGCQNSGP*PGKGLF
Trigger: AAATAGTCCCTTTCCAGGCCAAGGACCTGAATTCTG...GCAACCACAGTGCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
3UTR-3UTR CCA 90 bp GTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGCACTTTCAGGTCCTTGGCCTaGAAAGGGACTATTTTATGG +
Preference number: 2 (lower is better)
Translates to: VLYWMLPLLRPPVSATCTFRSLA*KGTILW
Trigger: CCATAAAATAGTCCCTTTCCAGGCCAAGGACCTGAA...AGTGCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
3UTR-3UTR CCA 90 bp GTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGCACTCAGAATTCAGGTCCTTaGCCTGGAAAGGGACTATTT +
Preference number: 2 (lower is better)
Translates to: VLYWMLPLLRPPVSATCTQNSGP*PGKGLF
Trigger: AAATAGTCCCTTTCCAGGCCAAGGACCTGAATTCTG...AGTGCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
3UTR-3UTR CCA 90 bp GATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGCACTGTGGTTGCATTCAGAATTCAGGTCCTTaGCCTGGAAAGGGACTATTT +
Preference number: 2 (lower is better)
Translates to: DAAPPAAAGICNMHCGCIQNSGP*PGKGLF
Trigger: AAATAGTCCCTTTCCAGGCCAAGGACCTGAATTCTG...AATGCAACCACAGTGCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
3UTR-3UTR GCA 90 bp GAATGTGTGTCCATGTGTCTGAATACCCTTTTTAGCCCAGTGTCTGTAAAATTCTCCTCTACTGGATGCTaGCCCTCCTGCGGCCGCCGG +
Preference number: 2 (lower is better)
Translates to: ECVSMCLNTLFSPVSVKFSSTGC*PSCGRR
Trigger: CCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGA...GAATTTTACAGACACTGGGCTAAAAAGGGTATTCAGACACATGGACACACATTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
3UTR-3UTR GCA 90 bp AAGGTAGCAAACAGGCTGAAAAACAGGCCCAGTATACAAGTTCCCCTTGATTTTCAGTCCTCTACTGGATaGTGCCCCTCCTGCGGCCGC +
Preference number: 2 (lower is better)
Translates to: KVANRLKNRPSIQVPLDFQSSTG*CPSCGR
Trigger: GCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTG...AAAATCAAGGGGAACTTGTATACTGGGCCTGTTTTTCAGCCTGTTTGCTACCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
3UTR-3UTR GCA 90 bp GGACCATATGATGACATTCTAGGAATGTGTGTCCATGTGTCTGAATACCCTTTTCAGTCCTCTACTGGATaGTGCCCCTCCTGCGGCCGC +
Preference number: 2 (lower is better)
Translates to: GPYDDILGMCVHVSEYPFQSSTG*CPSCGR
Trigger: GCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTG...AAAAGGGTATTCAGACACATGGACACACATTCCTAGAATGTCATCATATGGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
3UTR-3UTR CCA 90 bp AAGGTAGCAAACAGGCTGAAAAACAGGCCCAGTATACAAGTTCCCCTTGATTTTACGCCAGTCCTCTACTaGATGCTGCCCCTCCTGCGG +
Preference number: 2 (lower is better)
Translates to: KVANRLKNRPSIQVPLDFTPVLY*MLPLLR
Trigger: CCGCAGGAGGGGCAGCATCCAGTAGAGGACTGGCGT...AAAATCAAGGGGAACTTGTATACTGGGCCTGTTTTTCAGCCTGTTTGCTACCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
3UTR-3UTR GCA 90 bp GGTGACATGGAATTAGGACCATATGATGACATTCTAGGAATGTGTGTCCATGTGGCGGCCGCCGGTATCTaGAACATGCACTGTGGTTGC +
Preference number: 2 (lower is better)
Translates to: GDMELGPYDDILGMCVHVAAAGI*NMHCGC
Trigger: GCAACCACAGTGCATGTTGCAGATACCGGCGGCCGC...CACATGGACACACATTCCTAGAATGTCATCATATGGTCCTAATTCCATGTCACC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000575847.8
3UTR-3UTR CCA 90 bp GGACCATATGATGACATTCTAGGAATGTGTGTCCATGTGTCTGAATACCCTTTTACGCCAGTCCTCTACTaGATGCTGCCCCTCCTGCGG +
Preference number: 2 (lower is better)
Translates to: GPYDDILGMCVHVSEYPFTPVLY*MLPLLR
Trigger: CCGCAGGAGGGGCAGCATCCAGTAGAGGACTGGCGT...AAAAGGGTATTCAGACACATGGACACACATTCCTAGAATGTCATCATATGGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
3UTR-3UTR CCA 90 bp GAATGTGTGTCCATGTGTCTGAATACCCTTTTTAGCCCAGTGTCTGTAAAATTCACGCCAGTCCTCTACTaGATGCTGCCCCTCCTGCGG +
Preference number: 2 (lower is better)
Translates to: ECVSMCLNTLFSPVSVKFTPVLY*MLPLLR
Trigger: CCGCAGGAGGGGCAGCATCCAGTAGAGGACTGGCGT...GAATTTTACAGACACTGGGCTAAAAAGGGTATTCAGACACATGGACACACATTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
3UTR-3UTR GCA 90 bp GGACCATATGATGACATTCTAGGAATGTGTGTCCATGTGTCTGAATACCCTTTTGCGGCCGCCGGTATCTaGAACATGCACTGTGGTTGC +
Preference number: 2 (lower is better)
Translates to: GPYDDILGMCVHVSEYPFAAAGI*NMHCGC
Trigger: GCAACCACAGTGCATGTTGCAGATACCGGCGGCCGC...AAAAGGGTATTCAGACACATGGACACACATTCCTAGAATGTCATCATATGGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
3UTR-3UTR GCA 90 bp TCATTCTCCTCCAGGTCTGGCAGTGTCTCCTTGTCCAGCCTCATTGGCTTCTTAACCATCTCCGAAACCTaGTTATTTGTTTATCGATCC +
Preference number: 2 (lower is better)
Translates to: SFSSRSGSVSLSSLIGFLTISET*LFVYRS
Trigger: GGATCGATAAACAAATAAGCAGGTTTCGGAGATGGT...TAAGAAGCCAATGAGGCTGGACAAGGAGACACTGCCAGACCTGGAGGAGAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549155.6
3UTR-3UTR TCA 90 bp GGACCATATGATGACATTCTAGGAATGTGTGTCCATGTGTCTGAATACCCTTTTCGCTGGACTGCAACGTaGTTTCACAGCAGTGTGACT +
Preference number: 2 (lower is better)
Translates to: GPYDDILGMCVHVSEYPFRWTAT*FHSSVT
Trigger: AGTCACACTGCTGTGAAATCACGTTGCAGTCCAGCG...AAAAGGGTATTCAGACACATGGACACACATTCCTAGAATGTCATCATATGGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
3UTR-3UTR GCA 90 bp ACTGCCCATAATGTGCATGCTTGCTTGGTCAAGAATGGTCTATGGATAGATAGCAATTGTGCGCTGGACTaGAACGTGATTTCACAGCAG +
Preference number: 2 (lower is better)
Translates to: TAHNVHACLVKNGLWIDSNCALD*NVISQQ
Trigger: CTGCTGTGAAATCACGTTGCAGTCCAGCGCACAATT...GCTATCTATCCATAGACCATTCTTGACCAAGCAAGCATGCACATTATGGGCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
3UTR-3UTR GCA 90 bp GGTGACATGGAATTAGGACCATATGATGACATTCTAGGAATGTGTGTCCATGTGAATTGTGCGCTGGACTaGAACGTGATTTCACAGCAG +
Preference number: 2 (lower is better)
Translates to: GDMELGPYDDILGMCVHVNCALD*NVISQQ
Trigger: CTGCTGTGAAATCACGTTGCAGTCCAGCGCACAATT...CACATGGACACACATTCCTAGAATGTCATCATATGGTCCTAATTCCATGTCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000575847.8
3UTR-3UTR GCA 90 bp AAGGTAGCAAACAGGCTGAAAAACAGGCCCAGTATACAAGTTCCCCTTGATTTTAATTGTGCGCTGGACTaGAACGTGATTTCACAGCAG +
Preference number: 2 (lower is better)
Translates to: KVANRLKNRPSIQVPLDFNCALD*NVISQQ
Trigger: CTGCTGTGAAATCACGTTGCAGTCCAGCGCACAATT...AAAATCAAGGGGAACTTGTATACTGGGCCTGTTTTTCAGCCTGTTTGCTACCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
3UTR-3UTR CCA 90 bp GAGAATGTAACTGCCCATAATGTGCATGCTTGCTTGGTCAAGAATGGTCTATGGTTCAGGTCCTTGGCCTaGAAAGGGACTATTTTATGG +
Preference number: 2 (lower is better)
Translates to: ENVTAHNVHACLVKNGLWFRSLA*KGTILW
Trigger: CCATAAAATAGTCCCTTTCCAGGCCAAGGACCTGAA...CCATAGACCATTCTTGACCAAGCAAGCATGCACATTATGGGCAGTTACATTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
3UTR-3UTR CCA 90 bp ACTGCCCATAATGTGCATGCTTGCTTGGTCAAGAATGGTCTATGGATAGATAGCCAGAATTCAGGTCCTTaGCCTGGAAAGGGACTATTT +
Preference number: 2 (lower is better)
Translates to: TAHNVHACLVKNGLWIDSQNSGP*PGKGLF
Trigger: AAATAGTCCCTTTCCAGGCCAAGGACCTGAATTCTG...GCTATCTATCCATAGACCATTCTTGACCAAGCAAGCATGCACATTATGGGCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
3UTR-3UTR TCA 90 bp ATGCACGATTCTACTTCTTGTGGCATTGTTGAAGAACGTTTCTTTGTTGTGTATTATCGATCCTGCTCATaGACTTGTAACGGCGGGGCA +
Preference number: 2 (lower is better)
Translates to: MHDSTSCGIVEERFFVVYYRSCS*TCNGGA
Trigger: TGCCCCGCCGTTACAAGTTCATGAGCAGGATCGATA...ATACACAACAAAGAAACGTTCTTCAACAATGCCACAAGAAGTAGAATCGTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549155.6
3UTR-3UTR GCA 90 bp GGACCATATGATGACATTCTAGGAATGTGTGTCCATGTGTCTGAATACCCTTTTAATTGTGCGCTGGACTaGAACGTGATTTCACAGCAG +
Preference number: 2 (lower is better)
Translates to: GPYDDILGMCVHVSEYPFNCALD*NVISQQ
Trigger: CTGCTGTGAAATCACGTTGCAGTCCAGCGCACAATT...AAAAGGGTATTCAGACACATGGACACACATTCCTAGAATGTCATCATATGGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
3UTR-3UTR CCA 90 bp CTTGAGAATGTAACTGCCCATAATGTGCATGCTTGCTTGGTCAAGAATGGTCTATTCAGGTCCTTGGCCTaGAAAGGGACTATTTTATGG +
Preference number: 2 (lower is better)
Translates to: LENVTAHNVHACLVKNGLFRSLA*KGTILW
Trigger: CCATAAAATAGTCCCTTTCCAGGCCAAGGACCTGAA...TAGACCATTCTTGACCAAGCAAGCATGCACATTATGGGCAGTTACATTCTCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
3UTR-3UTR CCA 90 bp GGACCATATGATGACATTCTAGGAATGTGTGTCCATGTGTCTGAATACCCTTTTTTCAGGTCCTTGGCCTaGAAAGGGACTATTTTATGG +
Preference number: 2 (lower is better)
Translates to: GPYDDILGMCVHVSEYPFFRSLA*KGTILW
Trigger: CCATAAAATAGTCCCTTTCCAGGCCAAGGACCTGAA...AAAAGGGTATTCAGACACATGGACACACATTCCTAGAATGTCATCATATGGTCC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
3UTR-3UTR CCA 90 bp GGTTGCATTTTTAGTCATTCACTTGAGTGTGCTTTTGCACAGCCAGAAGAAGTACAGAATTCAGGTCCTTaGCCTGGAAAGGGACTATTT +
Preference number: 2 (lower is better)
Translates to: GCIFSHSLECAFAQPEEVQNSGP*PGKGLF
Trigger: AAATAGTCCCTTTCCAGGCCAAGGACCTGAATTCTG...TACTTCTTCTGGCTGTGCAAAAGCACACTCAAGTGAATGACTAAAAATGCAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
3UTR-3UTR TCA 90 bp TTTATCGATCCTGCTCATGAACTTGTAACGGCGGGGCAGGTAATAGATTTTTCTGAAGAACAGCAAAAATaGAGCCAGTCGAGAAGAAAA +
Preference number: 2 (lower is better)
Translates to: FIDPAHELVTAGQVIDFSEEQQK*SQSRRK
Trigger: TTTTCTTCTCGACTGGCTTCATTTTTGCTGTTCTTC...AGAAAAATCTATTACCTGCCCCGCCGTTACAAGTTCATGAGCAGGATCGATAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000549155.6
3UTR-3UTR CCA 90 bp GAATGTGTGTCCATGTGTCTGAATACCCTTTTTAGCCCAGTGTCTGTAAAATTCATGTGCATGCTTGCTTaGTCAAGAATGGTCTATGGA +
Preference number: 2 (lower is better)
Translates to: ECVSMCLNTLFSPVSVKFMCMLA*SRMVYG
Trigger: TCCATAGACCATTCTTGACCAAGCAAGCATGCACAT...GAATTTTACAGACACTGGGCTAAAAAGGGTATTCAGACACATGGACACACATTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
3UTR-3UTR CCA 90 bp GGACCATATGATGACATTCTAGGAATGTGTGTCCATGTGTCTGAATACCCTTTTATGTGCATGCTTGCTTaGTCAAGAATGGTCTATGGA +
Preference number: 2 (lower is better)
Translates to: GPYDDILGMCVHVSEYPFMCMLA*SRMVYG
Trigger: TCCATAGACCATTCTTGACCAAGCAAGCATGCACAT...AAAAGGGTATTCAGACACATGGACACACATTCCTAGAATGTCATCATATGGTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
3UTR-3UTR GCA 90 bp ACTGCCCATAATGTGCATGCTTGCTTGGTCAAGAATGGTCTATGGATAGATAGCAACATGCACTGTGGTTaGATTTTTAGTCATTCACTT +
Preference number: 2 (lower is better)
Translates to: TAHNVHACLVKNGLWIDSNMHCG*IFSHSL
Trigger: AAGTGAATGACTAAAAATGCAACCACAGTGCATGTT...GCTATCTATCCATAGACCATTCTTGACCAAGCAAGCATGCACATTATGGGCAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
3UTR-3UTR GCA 90 bp GAGAATGTAACTGCCCATAATGTGCATGCTTGCTTGGTCAAGAATGGTCTATGGAACATGCACTGTGGTTaGATTTTTAGTCATTCACTT +
Preference number: 2 (lower is better)
Translates to: ENVTAHNVHACLVKNGLWNMHCG*IFSHSL
Trigger: AAGTGAATGACTAAAAATGCAACCACAGTGCATGTT...CCATAGACCATTCTTGACCAAGCAAGCATGCACATTATGGGCAGTTACATTCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
3UTR-3UTR CCA 90 bp GAATGTGTGTCCATGTGTCTGAATACCCTTTTTAGCCCAGTGTCTGTAAAATTCGTCAAGAATGGTCTATaGATAGATAGCAATTGTGCG +
Preference number: 2 (lower is better)
Translates to: ECVSMCLNTLFSPVSVKFVKNGL*IDSNCA
Trigger: CGCACAATTGCTATCTATCCATAGACCATTCTTGAC...GAATTTTACAGACACTGGGCTAAAAAGGGTATTCAGACACATGGACACACATTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
3UTR CCA 72 bp TTTCACAGCAGTGTGACTCCAACGCCAGTCCTCTACTaGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCA +
Preference number: 3 (lower is better)
Translates to: FHSSVTPTPVLY*MLPLLRPPVSA
Trigger: TGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGGCGTTGGAGTCACACTGCTGTGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
3UTR TCA 72 bp TTGTGCGCTGGACTGCAACGTGATTTCACAGCAGTGTaGCTCCAACGCCAGTCCTCTACTGGATGCTGCCCC +
Preference number: 3 (lower is better)
Translates to: LCAGLQRDFTAV*LQRQSSTGCCP
Trigger: GGGGCAGCATCCAGTAGAGGACTGGCGTTGGAGTCACACTGCTGTGAAATCACGTTGCAGTCCAGCGCACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
3UTR GCA 72 bp CTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTaGAACATGCACTGTGGTTGCATTTTTAGTCATTCA +
Preference number: 3 (lower is better)
Translates to: LLDAAPPAAAGI*NMHCGCIFSHS
Trigger: TGAATGACTAAAAATGCAACCACAGTGCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
3UTR-3UTR CAA 90 bp ATTCTCCTCCAGGTCTGGCAGTGTCTCCTTGTCCAGCCTCATTGGCTTCTTAGGCCGAAACCTGCTTATTaGTTTATCGATCCTGCTCAT +
Preference number: 3 (lower is better)
Translates to: ILLQVWQCLLVQPHWLLRPKPAY*FIDPAH
Trigger: ATGAGCAGGATCGATAAACAAATAAGCAGGTTTCGG...CCTAAGAAGCCAATGAGGCTGGACAAGGAGACACTGCCAGACCTGGAGGAGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549155.6
3UTR-3UTR CAA 90 bp GAAGAACGTTTCTTTGTTGTGTATGATGAAGTGATGGATCCTTTGCTGGCTGAATCTGGCAGTGTCTCCTaGTCCAGCCTCATTGGCTTC +
Preference number: 3 (lower is better)
Translates to: EERFFVVYDEVMDPLLAESGSVS*SSLIGF
Trigger: GAAGCCAATGAGGCTGGACAAGGAGACACTGCCAGA...TTCAGCCAGCAAAGGATCCATCACTTCATCATACACAACAAAGAAACGTTCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549155.6
3UTR-3UTR CAA 90 bp GGTGACATGGAATTAGGACCATATGATGACATTCTAGGAATGTGTGTCCATGTGAATGTGCATGCTTGCTaGGTCAAGAATGGTCTATGG +
Preference number: 3 (lower is better)
Translates to: GDMELGPYDDILGMCVHVNVHAC*VKNGLW
Trigger: CCATAGACCATTCTTGACCAAGCAAGCATGCACATT...CACATGGACACACATTCCTAGAATGTCATCATATGGTCCTAATTCCATGTCACC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000575847.8
3UTR-3UTR CAA 90 bp AAGGTAGCAAACAGGCTGAAAAACAGGCCCAGTATACAAGTTCCCCTTGATTTTAATGTGCATGCTTGCTaGGTCAAGAATGGTCTATGG +
Preference number: 3 (lower is better)
Translates to: KVANRLKNRPSIQVPLDFNVHAC*VKNGLW
Trigger: CCATAGACCATTCTTGACCAAGCAAGCATGCACATT...AAAATCAAGGGGAACTTGTATACTGGGCCTGTTTTTCAGCCTGTTTGCTACCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
3UTR GCA 72 bp AAACTTGAGAATGTAACTGCCCATAATGTGCATGCTTaGTTGGTCAAGAATGGTCTATGGATAGATAGCAAT +
Preference number: 3 (lower is better)
Translates to: KLENVTAHNVHA*LVKNGLWIDSN
Trigger: ATTGCTATCTATCCATAGACCATTCTTGACCAAGCAAGCATGCACATTATGGGCAGTTACATTCTCAAGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR TCA 90 bp ACGCCAGTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACAAGGCAGGCGACGACGTaGCGCTGGGCGGCTTGCCAC +
Preference number: 4 (lower is better)
Translates to: TPVLYWMLPLLRPPVSATRQATT*RWAACH
Trigger: GTGGCAAGCCGCCCAGCGTCACGTCGTCGCCTGCCT...TGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGGCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR GCA 90 bp GTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGCACTTCCTCTACTGGATGCTaGCCCTCCTGCGGCCGCCGG +
Preference number: 4 (lower is better)
Translates to: VLYWMLPLLRPPVSATCTSSTGC*PSCGRR
Trigger: CCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGA...AGTGCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR GCA 90 bp AACGCCAGTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACCAGTCCTCTACTGGATaGTGCCCCTCCTGCGGCCGC +
Preference number: 4 (lower is better)
Translates to: NASPLLDAAPPAAAGICNQSSTG*CPSCGR
Trigger: GCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTG...GTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGGCGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR GCA 90 bp ACGCCAGTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACACAGTCCTCTACTGGATaGTGCCCCTCCTGCGGCCGC +
Preference number: 4 (lower is better)
Translates to: TPVLYWMLPLLRPPVSATQSSTG*CPSCGR
Trigger: GCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTG...TGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGGCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR TCA 90 bp CTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGCACTGTGGTTGCTCTGCCTGGTGGGAGTaGGGAATGCCTGACCACAGG +
Preference number: 4 (lower is better)
Translates to: LDAAPPAAAGICNMHCGCSAWWE*GMPDHR
Trigger: CCTGTGGTCAGGCATTCCTCACTCCCACCAGGCAGA...GCAACCACAGTGCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR TCA 90 bp CCAGTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGCGCCATAGGGCACCAGTaGATGAGGCGGGTCACGGTA +
Preference number: 4 (lower is better)
Translates to: PVLYWMLPLLRPPVSATCAIGHQ*MRRVTV
Trigger: TACCGTGACCCGCCTCATTCACTGGTGCCCTATGGC...GCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR GCA 90 bp CCAGTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGCGCGGCCGCCGGTATCTaGAACATGCACTGTGGTTGC +
Preference number: 4 (lower is better)
Translates to: PVLYWMLPLLRPPVSATCAAAGI*NMHCGC
Trigger: GCAACCACAGTGCATGTTGCAGATACCGGCGGCCGC...GCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR GCA 90 bp ACGCCAGTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACAGCGGCCGCCGGTATCTaGAACATGCACTGTGGTTGC +
Preference number: 4 (lower is better)
Translates to: TPVLYWMLPLLRPPVSATAAAGI*NMHCGC
Trigger: GCAACCACAGTGCATGTTGCAGATACCGGCGGCCGC...TGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR CCA 90 bp GTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGCACTACGCCAGTCCTCTACTaGATGCTGCCCCTCCTGCGG +
Preference number: 4 (lower is better)
Translates to: VLYWMLPLLRPPVSATCTTPVLY*MLPLLR
Trigger: CCGCAGGAGGGGCAGCATCCAGTAGAGGACTGGCGT...AGTGCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR TCA 90 bp GTGATTTCACAGCAGTGTGACTCCAACGCCAGTCCTCTACTGGATGCTGCCCCTAGGCAGGCGACGACGTaGCGCTGGGCGGCTTGCCAC +
Preference number: 4 (lower is better)
Translates to: VISQQCDSNASPLLDAAPRQATT*RWAACH
Trigger: GTGGCAAGCCGCCCAGCGTCACGTCGTCGCCTGCCT...AGGGGCAGCATCCAGTAGAGGACTGGCGTTGGAGTCACACTGCTGTGAAATCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR TCA 90 bp GTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGCACTTCTGCCTGGTGGGAGTaGGGAATGCCTGACCACAGG +
Preference number: 4 (lower is better)
Translates to: VLYWMLPLLRPPVSATCTSAWWE*GMPDHR
Trigger: CCTGTGGTCAGGCATTCCTCACTCCCACCAGGCAGA...AGTGCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR TCA 90 bp AACGCCAGTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACTCACCACCCGGTAAATaGCGATCCCGAACACGGCAG +
Preference number: 4 (lower is better)
Translates to: NASPLLDAAPPAAAGICNSPPGK*RSRTRQ
Trigger: CTGCCGTGTTCGGGATCGTCATTTACCGGGTGGTGA...GTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGGCGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR TCA 90 bp CTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGCACTGTGGTTGCTCACCACCCGGTAAATaGCGATCCCGAACACGGCAG +
Preference number: 4 (lower is better)
Translates to: LDAAPPAAAGICNMHCGCSPPGK*RSRTRQ
Trigger: CTGCCGTGTTCGGGATCGTCATTTACCGGGTGGTGA...GCAACCACAGTGCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR TCA 90 bp GTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGCACTGCCATAGGGCACCAGTaGATGAGGCGGGTCACGGTA +
Preference number: 4 (lower is better)
Translates to: VLYWMLPLLRPPVSATCTAIGHQ*MRRVTV
Trigger: TACCGTGACCCGCCTCATTCACTGGTGCCCTATGGC...AGTGCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR TCA 90 bp CAGCAGTGTGACTCCAACGCCAGTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGAAGAGAGGCAGATCTaGTGGGAGGGTTGGTCTGCC +
Preference number: 4 (lower is better)
Translates to: QQCDSNASPLLDAAPPAAEERQI*WEGWSA
Trigger: GGCAGACCAACCCTCCCATCAGATCTGCCTCTCTTC...GGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGGCGTTGGAGTCACACTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644049.1
CDS-3UTR CCA 90 bp CCAGTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGCGACAGGACAAAGGTGTaGCCTGGTCAGTCTTGCGGG +
Preference number: 4 (lower is better)
Translates to: PVLYWMLPLLRPPVSATCDRTKV*PGQSCG
Trigger: CCCGCAAGACTGACCAGGCCACACCTTTGTCCTGTC...GCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644049.1
CDS-3UTR TCA 90 bp TGTAGCAGTCATTCTCCTCCAGGTCTGGCAGTGTCTCCTTGTCCAGCCTCATTGAGGCAGGCGACGACGTaGCGCTGGGCGGCTTGCCAC +
Preference number: 4 (lower is better)
Translates to: CSSHSPPGLAVSPCPASLRQATT*RWAACH
Trigger: GTGGCAAGCCGCCCAGCGTCACGTCGTCGCCTGCCT...CAATGAGGCTGGACAAGGAGACACTGCCAGACCTGGAGGAGAATGACTGCTACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549155.6
CDS-3UTR TCA 90 bp ACGCCAGTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACAGGATCCTTTGCTGGCTaGAAGGGGCAGTGTAGCAGT +
Preference number: 4 (lower is better)
Translates to: TPVLYWMLPLLRPPVSATGSFAG*KGQCSS
Trigger: ACTGCTACACTGCCCCTTTCAGCCAGCAAAGGATCC...TGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR TCA 90 bp ACGCCAGTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACAAGGCAGCGAAAGTGCTaGCAGTCACCACCCGGTAAA +
Preference number: 4 (lower is better)
Translates to: TPVLYWMLPLLRPPVSATRQRKC*QSPPGK
Trigger: TTTACCGGGTGGTGACTGTCAGCACTTTCGCTGCCT...TGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR GCA 90 bp GTGATTTCACAGCAGTGTGACTCCAACGCCAGTCCTCTACTGGATGCTGCCCCTTCCTCTACTGGATGCTaGCCCTCCTGCGGCCGCCGG +
Preference number: 4 (lower is better)
Translates to: VISQQCDSNASPLLDAAPSSTGC*PSCGRR
Trigger: CCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGA...AGGGGCAGCATCCAGTAGAGGACTGGCGTTGGAGTCACACTGCTGTGAAATCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR CCA 90 bp CTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGCACTGTGGTTGCTGCCCAGCTTCTCCTTaGCCTGCACAAGGTCCATAC +
Preference number: 4 (lower is better)
Translates to: LDAAPPAAAGICNMHCGCCPASP*PAQGPY
Trigger: GTATGGACCTTGTGCAGGCCAAGGAGAAGCTGGGCA...GCAACCACAGTGCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR TCA 90 bp ATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGCACTGTGGTTGCATTTGCCATAGGGCACCAGTaGATGAGGCGGGTCACGGTA +
Preference number: 4 (lower is better)
Translates to: MLPLLRPPVSATCTVVAFAIGHQ*MRRVTV
Trigger: TACCGTGACCCGCCTCATTCACTGGTGCCCTATGGC...AAATGCAACCACAGTGCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR TCA 90 bp CAGCAGTGTGACTCCAACGCCAGTCCTCTACTGGATGCTGCCCCTCCTGCGGCCCGCTGGACTGCAACGTaGTTTCACAGCAGTGTGACT +
Preference number: 4 (lower is better)
Translates to: QQCDSNASPLLDAAPPAARWTAT*FHSSVT
Trigger: AGTCACACTGCTGTGAAATCACGTTGCAGTCCAGCG...GGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGGCGTTGGAGTCACACTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR GCA 90 bp CCAGTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGCCCCCGGCTTCCAATCTaGTGGCATCATCTGAAGTAC +
Preference number: 4 (lower is better)
Translates to: PVLYWMLPLLRPPVSATCPRLPI*WHHLKY
Trigger: GTACTTCAGATGATGCCAGCAGATTGGAAGCCGGGG...GCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR GCA 90 bp CAGCAGTGTGACTCCAACGCCAGTCCTCTACTGGATGCTGCCCCTCCTGCGGCCCCAACCATGCACTTTTaGCCAGCTTCTCCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: QQCDSNASPLLDAAPPAAPTMHF*PASPWP
Trigger: AGGCCAAGGAGAAGCTGGGCAAAAGTGCATGGTTGG...GGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGGCGTTGGAGTCACACTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR GCA 90 bp AACGCCAGTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACTCCCCGAGAACTCACTaGCATCAGATTCAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: NASPLLDAAPPAAAGICNSPRTH*HQIQAQ
Trigger: CTGAGCCTGAATCTGATGGCAGTGAGTTCTCGGGGA...GTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGGCGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR CCA 90 bp AACGCCAGTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATTCTCCTCCAGGTCTaGCAGTGTCTCCTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: NASPLLDAAPPAAAGICNILLQV*QCLLVQ
Trigger: CTGGACAAGGAGACACTGCCAGACCTGGAGGAGAAT...GTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGGCGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CCA 90 bp CAGCAGTGTGACTCCAACGCCAGTCCTCTACTGGATGCTGCCCCTCCTGCGGCCTCCAATGAAGGCAGCTaGGAAGAGCATGCCGGTGTA +
Preference number: 4 (lower is better)
Translates to: QQCDSNASPLLDAAPPAASNEGS*EEHAGV
Trigger: TACACCGGCATGCTCTTCCCAGCTGCCTTCATTGGA...GGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGGCGTTGGAGTCACACTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CCA 90 bp CTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGCACTGTGGTTGCAGGCATCCACTAGGGTaGCACTCTTCTAGTCTCCAC +
Preference number: 4 (lower is better)
Translates to: LDAAPPAAAGICNMHCGCRHPLG*HSSSLH
Trigger: GTGGAGACTAGAAGAGTGCCACCCTAGTGGATGCCT...GCAACCACAGTGCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR TCA 90 bp GTGATTTCACAGCAGTGTGACTCCAACGCCAGTCCTCTACTGGATGCTGCCCCTGGAGTGAGGAATGCCTaGCCACAGGCAGGCGACGAC +
Preference number: 4 (lower is better)
Translates to: VISQQCDSNASPLLDAAPGVRNA*PQAGDD
Trigger: GTCGTCGCCTGCCTGTGGTCAGGCATTCCTCACTCC...AGGGGCAGCATCCAGTAGAGGACTGGCGTTGGAGTCACACTGCTGTGAAATCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR TCA 90 bp GAAAGGGGCAGTGTAGCAGTCATTCTCCTCCAGGTCTGGCAGTGTCTCCTTGTCGGAGTGAGGAATGCCTaGCCACAGGCAGGCGACGAC +
Preference number: 4 (lower is better)
Translates to: ERGSVAVILLQVWQCLLVGVRNA*PQAGDD
Trigger: GTCGTCGCCTGCCTGTGGTCAGGCATTCCTCACTCC...GACAAGGAGACACTGCCAGACCTGGAGGAGAATGACTGCTACACTGCCCCTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549155.6
CDS-3UTR TCA 90 bp CCAGTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGCTGCCTCCATTTTTATTaGCCTTCTGCCTGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: PVLYWMLPLLRPPVSATCCLHFY*PSAWWE
Trigger: CTCCCACCAGGCAGAAGGTCAATAAAAATGGAGGCA...GCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR TCA 90 bp CAGCAGTGTGACTCCAACGCCAGTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGGCAGACTTCTTTACTaGCTTGGCTGTGATCCAGAG +
Preference number: 4 (lower is better)
Translates to: QQCDSNASPLLDAAPPAAGRLLY*LGCDPE
Trigger: CTCTGGATCACAGCCAAGTCAGTAAAGAAGTCTGCC...GGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGGCGTTGGAGTCACACTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR TCA 90 bp GTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGCACTCGCTGGACTGCAACGTaGTTTCACAGCAGTGTGACT +
Preference number: 4 (lower is better)
Translates to: VLYWMLPLLRPPVSATCTRWTAT*FHSSVT
Trigger: AGTCACACTGCTGTGAAATCACGTTGCAGTCCAGCG...AGTGCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR GCA 90 bp AACGCCAGTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACTCCCCTCGGGCCGTATaGAGTTGTTTGTGCTGTAAA +
Preference number: 4 (lower is better)
Translates to: NASPLLDAAPPAAAGICNSPRAV*SCLCCK
Trigger: TTTACAGCACAAACAACTGCATACGGCCCGAGGGGA...GTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGGCGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392977.8
ENST00000392979.7
CDS-3UTR GCA 90 bp ACGCCAGTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATCCCCTCGGGCCGTATaGAGTTGTTTGTGCTGTAAA +
Preference number: 4 (lower is better)
Translates to: TPVLYWMLPLLRPPVSATSPRAV*SCLCCK
Trigger: TTTACAGCACAAACAACTGCATACGGCCCGAGGGGA...TGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392977.8
ENST00000392979.7
CDS-3UTR CCA 90 bp ACGCCAGTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACACCTCAAGTAGGCACCTaGGTGTCCTGTAAATCTTCC +
Preference number: 4 (lower is better)
Translates to: TPVLYWMLPLLRPPVSATPQVGT*VSCKSS
Trigger: GGAAGATTTACAGGACACCCAGGTGCCTACTTGAGG...TGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CCA 90 bp CAGCAGTGTGACTCCAACGCCAGTCCTCTACTGGATGCTGCCCCTCCTGCGGCCCCTCAAGTAGGCACCTaGGTGTCCTGTAAATCTTCC +
Preference number: 4 (lower is better)
Translates to: QQCDSNASPLLDAAPPAAPQVGT*VSCKSS
Trigger: GGAAGATTTACAGGACACCCAGGTGCCTACTTGAGG...GGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGGCGTTGGAGTCACACTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CCA 90 bp GTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGCACTAGGCATCCACTAGGGTaGCACTCTTCTAGTCTCCAC +
Preference number: 4 (lower is better)
Translates to: VLYWMLPLLRPPVSATCTRHPLG*HSSSLH
Trigger: GTGGAGACTAGAAGAGTGCCACCCTAGTGGATGCCT...AGTGCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CCA 90 bp CCAGTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGCCACGGCCACTCGTTGTaGTGTGCTTTTCCATTCTTC +
Preference number: 4 (lower is better)
Translates to: PVLYWMLPLLRPPVSATCHGHSL*CAFPFF
Trigger: GAAGAATGGAAAAGCACACCACAACGAGTGGCCGTG...GCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR CCA 90 bp ATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGCACTGTGGTTGCATTTCGGGTGAAGGATCGGTaGTACACAGGGATGCCTGCA +
Preference number: 4 (lower is better)
Translates to: MLPLLRPPVSATCTVVAFRVKDR*YTGMPA
Trigger: TGCAGGCATCCCTGTGTACCACCGATCCTTCACCCG...AAATGCAACCACAGTGCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644049.1
CDS-3UTR TCA 90 bp GTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGCACTTGCCTCCATTTTTATTaGCCTTCTGCCTGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: VLYWMLPLLRPPVSATCTCLHFY*PSAWWE
Trigger: CTCCCACCAGGCAGAAGGTCAATAAAAATGGAGGCA...AGTGCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR TCA 90 bp CTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGCACTGTGGTTGCTCTGCTGGCATCATCTaGAGTACTAGTCAGGTTTCC +
Preference number: 4 (lower is better)
Translates to: LDAAPPAAAGICNMHCGCSAGII*STSQVS
Trigger: GGAAACCTGACTAGTACTTCAGATGATGCCAGCAGA...GCAACCACAGTGCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR TCA 90 bp AACGCCAGTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACAGACAAACAATCCAATaGAGGCAGCTGGGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: NASPLLDAAPPAAAGICNRQTIQ*RQLGRA
Trigger: TGCTCTTCCCAGCTGCCTTCATTGGATTGTTTGTCT...GTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGGCGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR TCA 90 bp AACGCCAGTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACGTGTGTCCATGTGTCTaGATACCCTTTTTAGCCCAG +
Preference number: 4 (lower is better)
Translates to: NASPLLDAAPPAAAGICNVCPCV*IPFLAQ
Trigger: CTGGGCTAAAAAGGGTATTCAGACACATGGACACAC...GTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGGCGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR TCA 90 bp CTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGCACTGTGGTTGCGTGTGTCCATGTGTCTaGATACCCTTTTTAGCCCAG +
Preference number: 4 (lower is better)
Translates to: LDAAPPAAAGICNMHCGCVCPCV*IPFLAQ
Trigger: CTGGGCTAAAAAGGGTATTCAGACACATGGACACAC...GCAACCACAGTGCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR TCA 90 bp GTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGCACTAAACCTGTTGTGTCTTaGCTCAGGGTTTCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: VLYWMLPLLRPPVSATCTKPVVS*LRVSWL
Trigger: CAGCCAGGAAACCCTGAGTCAAGACACAACAGGTTT...AGTGCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644049.1
CDS-3UTR GCA 90 bp GATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGCACTGTGGTTGCATTCCCCGGCTTCCAATCTaGTGGCATCATCTGAAGTAC +
Preference number: 4 (lower is better)
Translates to: DAAPPAAAGICNMHCGCIPRLPI*WHHLKY
Trigger: GTACTTCAGATGATGCCAGCAGATTGGAAGCCGGGG...AATGCAACCACAGTGCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR GCA 90 bp CAGCAGTGTGACTCCAACGCCAGTCCTCTACTGGATGCTGCCCCTCCTGCGGCCATGTCGGTGGTTTTCTaGTCCATGGGTTCGAATGGA +
Preference number: 4 (lower is better)
Translates to: QQCDSNASPLLDAAPPAAMSVVF*SMGSNG
Trigger: TCCATTCGAACCCATGGAGCAGAAAACCACCGACAT...GGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGGCGTTGGAGTCACACTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR GCA 90 bp CTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGCACTGTGGTTGCCTCCAGGAAAACTGTTaGCCAGACTGCCATGAAAAC +
Preference number: 4 (lower is better)
Translates to: LDAAPPAAAGICNMHCGCLQENC*PDCHEN
Trigger: GTTTTCATGGCAGTCTGGGCAACAGTTTTCCTGGAG...GCAACCACAGTGCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR GCA 90 bp AACGCCAGTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACAGCAGTCCCTGTGGTTaGAACCTGAGAGTTATTCCT +
Preference number: 4 (lower is better)
Translates to: NASPLLDAAPPAAAGICNSSPCG*NLRVIP
Trigger: AGGAATAACTCTCAGGTTGCAACCACAGGGACTGCT...GTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGGCGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR GCA 90 bp CCAGTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGCTCACATAGCCAACCATaGACTTTTGCCCAGCTTCTC +
Preference number: 4 (lower is better)
Translates to: PVLYWMLPLLRPPVSATCSHSQP*TFAQLL
Trigger: GAGAAGCTGGGCAAAAGTGCATGGTTGGCTATGTGA...GCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR GCA 90 bp GATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGCACTGTGGTTGCATTTCCCCGAGAACTCACTaGCATCAGATTCAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: DAAPPAAAGICNMHCGCISPRTH*HQIQAQ
Trigger: CTGAGCCTGAATCTGATGGCAGTGAGTTCTCGGGGA...AATGCAACCACAGTGCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR GCA 90 bp ACGCCAGTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACAAATTGTGCGCTGGACTaGAACGTGATTTCACAGCAG +
Preference number: 4 (lower is better)
Translates to: TPVLYWMLPLLRPPVSATNCALD*NVISQQ
Trigger: CTGCTGTGAAATCACGTTGCAGTCCAGCGCACAATT...TGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR GCA 90 bp AACGCCAGTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACAATTGTGCGCTGGACTaGAACGTGATTTCACAGCAG +
Preference number: 4 (lower is better)
Translates to: NASPLLDAAPPAAAGICNNCALD*NVISQQ
Trigger: CTGCTGTGAAATCACGTTGCAGTCCAGCGCACAATT...GTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGGCGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR GCA 90 bp AGCAGTCATTCTCCTCCAGGTCTGGCAGTGTCTCCTTGTCCAGCCTCATTGGCTGTGGGTAAGCCCAATTaGCACAGGCCCCGCAACGTC +
Preference number: 4 (lower is better)
Translates to: SSHSPPGLAVSPCPASLAVGKPN*HRPRNV
Trigger: GACGTTGCGGGGCCTGTGGCAATTGGGCTTACCCAC...AGCCAATGAGGCTGGACAAGGAGACACTGCCAGACCTGGAGGAGAATGACTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549155.6
CDS-3UTR CCA 90 bp AACGCCAGTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACTCCTTTCGTTCCTTCTaGAGACGTTCCAGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: NASPLLDAAPPAAAGICNSFRSF*RRSSSA
Trigger: AGCAGAACTGGAACGTCTCCAGAAGGAACGAAAGGA...GTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGGCGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR CCA 90 bp CTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGCACTGTGGTTGCGACATCCTTGGCCACTaGGTGGAAGACTTTGGTTTT +
Preference number: 4 (lower is better)
Translates to: LDAAPPAAAGICNMHCGCDILGH*VEDFGF
Trigger: AAAACCAAAGTCTTCCACCCAGTGGCCAAGGATGTC...GCAACCACAGTGCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392979.7
CDS-3UTR TCA 90 bp GTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGCACTTCTGCTGGCATCATCTaGAGTACTAGTCAGGTTTCC +
Preference number: 4 (lower is better)
Translates to: VLYWMLPLLRPPVSATCTSAGII*STSQVS
Trigger: GGAAACCTGACTAGTACTTCAGATGATGCCAGCAGA...AGTGCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR TCA 90 bp ACGCCAGTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGTGATCCAGAGTGGTaGCGCCATACAAAAAGACAA +
Preference number: 4 (lower is better)
Translates to: TPVLYWMLPLLRPPVSATCDPEW*RHTKRQ
Trigger: TTGTCTTTTTGTATGGCGTCACCACTCTGGATCACA...TGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGGCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR TCA 90 bp CCAGTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGCTGTGATCCAGAGTGGTaGCGCCATACAAAAAGACAA +
Preference number: 4 (lower is better)
Translates to: PVLYWMLPLLRPPVSATCCDPEW*RHTKRQ
Trigger: TTGTCTTTTTGTATGGCGTCACCACTCTGGATCACA...GCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR TCA 90 bp GTGATTTCACAGCAGTGTGACTCCAACGCCAGTCCTCTACTGGATGCTGCCCCTTCACCACCCGGTAAATaGCGATCCCGAACACGGCAG +
Preference number: 4 (lower is better)
Translates to: VISQQCDSNASPLLDAAPSPPGK*RSRTRQ
Trigger: CTGCCGTGTTCGGGATCGTCATTTACCGGGTGGTGA...AGGGGCAGCATCCAGTAGAGGACTGGCGTTGGAGTCACACTGCTGTGAAATCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR TCA 90 bp ATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGCACTGTGGTTGCATTTCGCTGGACTGCAACGTaGTTTCACAGCAGTGTGACT +
Preference number: 4 (lower is better)
Translates to: MLPLLRPPVSATCTVVAFRWTAT*FHSSVT
Trigger: AGTCACACTGCTGTGAAATCACGTTGCAGTCCAGCG...AAATGCAACCACAGTGCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR GCA 90 bp GTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGCACTCTCCAGGAAAACTGTTaGCCAGACTGCCATGAAAAC +
Preference number: 4 (lower is better)
Translates to: VLYWMLPLLRPPVSATCTLQENC*PDCHEN
Trigger: GTTTTCATGGCAGTCTGGGCAACAGTTTTCCTGGAG...AGTGCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR GCA 90 bp CCAGTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGCAGCTTCTCCTTGGCCTaGACAAGGTCCATACTTATA +
Preference number: 4 (lower is better)
Translates to: PVLYWMLPLLRPPVSATCSFSLA*TRSILI
Trigger: TATAAGTATGGACCTTGTGCAGGCCAAGGAGAAGCT...GCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR GCA 90 bp CAGCAGTGTGACTCCAACGCCAGTCCTCTACTGGATGCTGCCCCTCCTGCGGCCAGCTTCTCCTTGGCCTaGACAAGGTCCATACTTATA +
Preference number: 4 (lower is better)
Translates to: QQCDSNASPLLDAAPPAASFSLA*TRSILI
Trigger: TATAAGTATGGACCTTGTGCAGGCCAAGGAGAAGCT...GGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGGCGTTGGAGTCACACTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR GCA 90 bp GTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGCACTTCACATAGCCAACCATaGACTTTTGCCCAGCTTCTC +
Preference number: 4 (lower is better)
Translates to: VLYWMLPLLRPPVSATCTSHSQP*TFAQLL
Trigger: GAGAAGCTGGGCAAAAGTGCATGGTTGGCTATGTGA...AGTGCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR GCA 90 bp ACGCCAGTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACAGAGACGTTCCAGTTCTaGTTCATACATCATCTCCTG +
Preference number: 4 (lower is better)
Translates to: TPVLYWMLPLLRPPVSATETFQF*FIHHLL
Trigger: CAGGAGATGATGTATGAAGCAGAACTGGAACGTCTC...TGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR GCA 90 bp CCAGTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGCGAGACGTTCCAGTTCTaGTTCATACATCATCTCCTG +
Preference number: 4 (lower is better)
Translates to: PVLYWMLPLLRPPVSATCETFQF*FIHHLL
Trigger: CAGGAGATGATGTATGAAGCAGAACTGGAACGTCTC...GCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR GCA 90 bp GCTTTTGCACAGCCAGAAGAAGTAAACAGAATTCAGGTCCTTGGCCTGGAAAGGTCCTCTACTGGATGCTaGCCCTCCTGCGGCCGCCGG +
Preference number: 4 (lower is better)
Translates to: AFAQPEEVNRIQVLGLERSSTGC*PSCGRR
Trigger: CCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGA...CCTTTCCAGGCCAAGGACCTGAATTCTGTTTACTTCTTCTGGCTGTGCAAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR GCA 90 bp CAGCAGTGTGACTCCAACGCCAGTCCTCTACTGGATGCTGCCCCTCCTGCGGCCATGGGAGGGTTGGTCTaGCTTGTACGTATGGATTTT +
Preference number: 4 (lower is better)
Translates to: QQCDSNASPLLDAAPPAAMGGLV*LVRMDF
Trigger: AAAATCCATACGTACAAGGCAGACCAACCCTCCCAT...GGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGGCGTTGGAGTCACACTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644049.1
CDS-3UTR CCA 90 bp CTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGCACTGTGGTTGCATCCACACCTCCTTCTaGGTGGAAGACTTTGGTTTT +
Preference number: 4 (lower is better)
Translates to: LDAAPPAAAGICNMHCGCIHTSF*VEDFGF
Trigger: AAAACCAAAGTCTTCCACCCAGAAGGAGGTGTGGAT...GCAACCACAGTGCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392977.8
ENST00000644049.1
CDS-3UTR CCA 90 bp ACGCCAGTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACAAAAGGTGGGTTACCTTaGCATATACACAGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: TPVLYWMLPLLRPPVSATKGGLP*HIHSCL
Trigger: CAGACAGCTGTGTATATGCCAAGGTAACCCACCTTT...TGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CCA 90 bp CCAGTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGCAAAGGGACTATTTTATaGTCACGGCCACTCGTTGTG +
Preference number: 4 (lower is better)
Translates to: PVLYWMLPLLRPPVSATCKGTIL*SRPLVV
Trigger: CACAACGAGTGGCCGTGACCATAAAATAGTCCCTTT...GCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR CCA 90 bp AACGCCAGTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACAAAGGGACTATTTTATaGTCACGGCCACTCGTTGTG +
Preference number: 4 (lower is better)
Translates to: NASPLLDAAPPAAAGICNKGTIL*SRPLVV
Trigger: CACAACGAGTGGCCGTGACCATAAAATAGTCCCTTT...GTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGGCGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR CCA 90 bp CAGCAGTGTGACTCCAACGCCAGTCCTCTACTGGATGCTGCCCCTCCTGCGGCCTTCAGGTCCTTGGCCTaGAAAGGGACTATTTTATGG +
Preference number: 4 (lower is better)
Translates to: QQCDSNASPLLDAAPPAAFRSLA*KGTILW
Trigger: CCATAAAATAGTCCCTTTCCAGGCCAAGGACCTGAA...GGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGGCGTTGGAGTCACACTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR CCA 90 bp AACGCCAGTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACTTCAGGTCCTTGGCCTaGAAAGGGACTATTTTATGG +
Preference number: 4 (lower is better)
Translates to: NASPLLDAAPPAAAGICNFRSLA*KGTILW
Trigger: CCATAAAATAGTCCCTTTCCAGGCCAAGGACCTGAA...GTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGGCGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR CCA 90 bp CAGCAGTGTGACTCCAACGCCAGTCCTCTACTGGATGCTGCCCCTCCTGCGGCCCAGAATTCAGGTCCTTaGCCTGGAAAGGGACTATTT +
Preference number: 4 (lower is better)
Translates to: QQCDSNASPLLDAAPPAAQNSGP*PGKGLF
Trigger: AAATAGTCCCTTTCCAGGCCAAGGACCTGAATTCTG...GGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGGCGTTGGAGTCACACTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR CCA 90 bp GCAGTCATTCTCCTCCAGGTCTGGCAGTGTCTCCTTGTCCAGCCTCATTGGCTTCGGGTGAAGGATCGGTaGTACACAGGGATGCCTGCA +
Preference number: 4 (lower is better)
Translates to: AVILLQVWQCLLVQPHWLRVKDR*YTGMPA
Trigger: TGCAGGCATCCCTGTGTACCACCGATCCTTCACCCG...AAGCCAATGAGGCTGGACAAGGAGACACTGCCAGACCTGGAGGAGAATGACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549155.6
CDS-3UTR CCA 90 bp AGCAGTCATTCTCCTCCAGGTCTGGCAGTGTCTCCTTGTCCAGCCTCATTGGCTGACAGGACAAAGGTGTaGCCTGGTCAGTCTTGCGGG +
Preference number: 4 (lower is better)
Translates to: SSHSPPGLAVSPCPASLADRTKV*PGQSCG
Trigger: CCCGCAAGACTGACCAGGCCACACCTTTGTCCTGTC...AGCCAATGAGGCTGGACAAGGAGACACTGCCAGACCTGGAGGAGAATGACTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549155.6
CDS-3UTR TCA 90 bp GATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGCACTGTGGTTGCATTTCTGCTGGCATCATCTaGAGTACTAGTCAGGTTTCC +
Preference number: 4 (lower is better)
Translates to: DAAPPAAAGICNMHCGCISAGII*STSQVS
Trigger: GGAAACCTGACTAGTACTTCAGATGATGCCAGCAGA...AATGCAACCACAGTGCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR TCA 90 bp AGCAGTCATTCTCCTCCAGGTCTGGCAGTGTCTCCTTGTCCAGCCTCATTGGCTGGATCCTTTGCTGGCTaGAAGGGGCAGTGTAGCAGT +
Preference number: 4 (lower is better)
Translates to: SSHSPPGLAVSPCPASLAGSFAG*KGQCSS
Trigger: ACTGCTACACTGCCCCTTTCAGCCAGCAAAGGATCC...AGCCAATGAGGCTGGACAAGGAGACACTGCCAGACCTGGAGGAGAATGACTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549155.6
CDS-3UTR TCA 90 bp AACGCCAGTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACTGTCTGACAGCCTCATaGATGGACAGTATTTATCAC +
Preference number: 4 (lower is better)
Translates to: NASPLLDAAPPAAAGICNCLTAS*MDSIYH
Trigger: GTGATAAATACTGTCCATTCATGAGGCTGTCAGACA...GTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGGCGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR TCA 90 bp GATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGCACTGTGGTTGCATTGAAACATTTTCAGGGTaGAGCTGTTCTCCCACTCAG +
Preference number: 4 (lower is better)
Translates to: DAAPPAAAGICNMHCGCIETFSG*SCSPTQ
Trigger: CTGAGTGGGAGAACAGCTTCACCCTGAAAATGTTTC...AATGCAACCACAGTGCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR TCA 90 bp ACGCCAGTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACAGTCTCCTCCACTGTGTaGCAAATTTGTAAGCATCAA +
Preference number: 4 (lower is better)
Translates to: TPVLYWMLPLLRPPVSATVSSTV*QICKHQ
Trigger: TTGATGCTTACAAATTTGTCACACAGTGGAGGAGAC...TGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR GCA 90 bp AACGCCAGTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACTTTTTATTGACCTTCTaGCTGGTGGGAGTGAGGAAT +
Preference number: 4 (lower is better)
Translates to: NASPLLDAAPPAAAGICNFLLTF*LVGVRN
Trigger: ATTCCTCACTCCCACCAGGCAGAAGGTCAATAAAAA...GTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGGCGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR GCA 90 bp CAGCAGTGTGACTCCAACGCCAGTCCTCTACTGGATGCTGCCCCTCCTGCGGCCTTTTTATTGACCTTCTaGCTGGTGGGAGTGAGGAAT +
Preference number: 4 (lower is better)
Translates to: QQCDSNASPLLDAAPPAAFLLTF*LVGVRN
Trigger: ATTCCTCACTCCCACCAGGCAGAAGGTCAATAAAAA...GGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGGCGTTGGAGTCACACTGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR GCA 90 bp AACGCCAGTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACACTTCCCATGGGGCATaGAACTTCACAAAGATAATG +
Preference number: 4 (lower is better)
Translates to: NASPLLDAAPPAAAGICNTSHGA*NFTKIM
Trigger: CATTATCTTTGTGAAGTTGCATGCCCCATGGGAAGT...GTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGGCGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR GCA 90 bp CTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGCACTGTGGTTGCACTTCCCATGGGGCATaGAACTTCACAAAGATAATG +
Preference number: 4 (lower is better)
Translates to: LDAAPPAAAGICNMHCGCTSHGA*NFTKIM
Trigger: CATTATCTTTGTGAAGTTGCATGCCCCATGGGAAGT...GCAACCACAGTGCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR GCA 90 bp GCTTTTGCACAGCCAGAAGAAGTAAACAGAATTCAGGTCCTTGGCCTGGAAAGGCAGTCCTCTACTGGATaGTGCCCCTCCTGCGGCCGC +
Preference number: 4 (lower is better)
Translates to: AFAQPEEVNRIQVLGLERQSSTG*CPSCGR
Trigger: GCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTG...CCTTTCCAGGCCAAGGACCTGAATTCTGTTTACTTCTTCTGGCTGTGCAAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR CCA 90 bp ACGCCAGTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACAACAAGATCCAAAGGTTaGTATTTATACCACACGCCC +
Preference number: 4 (lower is better)
Translates to: TPVLYWMLPLLRPPVSATTRSKG*YLYHTP
Trigger: GGGCGTGTGGTATAAATACCAACCTTTGGATCTTGT...TGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CCA 90 bp GTGATTTCACAGCAGTGTGACTCCAACGCCAGTCCTCTACTGGATGCTGCCCCTTGCCCAGCTTCTCCTTaGCCTGCACAAGGTCCATAC +
Preference number: 4 (lower is better)
Translates to: VISQQCDSNASPLLDAAPCPASP*PAQGPY
Trigger: GTATGGACCTTGTGCAGGCCAAGGAGAAGCTGGGCA...AGGGGCAGCATCCAGTAGAGGACTGGCGTTGGAGTCACACTGCTGTGAAATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR CCA 90 bp AACGCCAGTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACGAAATACAGACAAGCTaGCATTCACATAGCCAACCA +
Preference number: 4 (lower is better)
Translates to: NASPLLDAAPPAAAGICNEIQTS*HSHSQP
Trigger: TGGTTGGCTATGTGAATGCCAGCTTGTCTGTATTTC...GTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGGCGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR CCA 90 bp CCAGTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGCGAAATACAGACAAGCTaGCATTCACATAGCCAACCA +
Preference number: 4 (lower is better)
Translates to: PVLYWMLPLLRPPVSATCEIQTS*HSHSQP
Trigger: TGGTTGGCTATGTGAATGCCAGCTTGTCTGTATTTC...GCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR CCA 90 bp AACGCCAGTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGTGCATGCTTGCTTaGTCAAGAATGGTCTATGGA +
Preference number: 4 (lower is better)
Translates to: NASPLLDAAPPAAAGICNMCMLA*SRMVYG
Trigger: TCCATAGACCATTCTTGACCAAGCAAGCATGCACAT...GTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGGCGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR CCA 90 bp ACGCCAGTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACAATGTGCATGCTTGCTTaGTCAAGAATGGTCTATGGA +
Preference number: 4 (lower is better)
Translates to: TPVLYWMLPLLRPPVSATMCMLA*SRMVYG
Trigger: TCCATAGACCATTCTTGACCAAGCAAGCATGCACAT...TGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR CCA 90 bp CCAGTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGCATGTGCATGCTTGCTTaGTCAAGAATGGTCTATGGA +
Preference number: 4 (lower is better)
Translates to: PVLYWMLPLLRPPVSATCMCMLA*SRMVYG
Trigger: TCCATAGACCATTCTTGACCAAGCAAGCATGCACAT...GCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR CCA 90 bp CAGCAGTGTGACTCCAACGCCAGTCCTCTACTGGATGCTGCCCCTCCTGCGGCCTATGGATTTTTCCAGTaGGTAAGCCCAATTGCCACA +
Preference number: 4 (lower is better)
Translates to: QQCDSNASPLLDAAPPAAYGFFQ*VSPIAT
Trigger: TGTGGCAATTGGGCTTACCCACTGGAAAAATCCATA...GGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGGCGTTGGAGTCACACTGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644049.1
CDS-3UTR TCA 90 bp GCTTTTGCACAGCCAGAAGAAGTAAACAGAATTCAGGTCCTTGGCCTGGAAAGGGGAGTGAGGAATGCCTaGCCACAGGCAGGCGACGAC +
Preference number: 4 (lower is better)
Translates to: AFAQPEEVNRIQVLGLERGVRNA*PQAGDD
Trigger: GTCGTCGCCTGCCTGTGGTCAGGCATTCCTCACTCC...CCTTTCCAGGCCAAGGACCTGAATTCTGTTTACTTCTTCTGGCTGTGCAAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR TCA 90 bp GTGATTTCACAGCAGTGTGACTCCAACGCCAGTCCTCTACTGGATGCTGCCCCTTATCGATCCTGCTCATaGACTTGTAACGGCGGGGCA +
Preference number: 4 (lower is better)
Translates to: VISQQCDSNASPLLDAAPYRSCS*TCNGGA
Trigger: TGCCCCGCCGTTACAAGTTCATGAGCAGGATCGATA...AGGGGCAGCATCCAGTAGAGGACTGGCGTTGGAGTCACACTGCTGTGAAATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR TCA 90 bp CCAGTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGCGTCTGGGATCAGATATaGAATGAGGTGCTTTATACA +
Preference number: 4 (lower is better)
Translates to: PVLYWMLPLLRPPVSATCVWDQI*NEVLYT
Trigger: TGTATAAAGCACCTCATTTCATATCTGATCCCAGAC...GCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR TCA 90 bp ATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGCACTGTGGTTGCATTTGTGTGTCCATGTGTCTaGATACCCTTTTTAGCCCAG +
Preference number: 4 (lower is better)
Translates to: MLPLLRPPVSATCTVVAFVCPCV*IPFLAQ
Trigger: CTGGGCTAAAAAGGGTATTCAGACACATGGACACAC...AAATGCAACCACAGTGCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR TCA 90 bp TCCAGGTCTGGCAGTGTCTCCTTGTCCAGCCTCATTGGCTTCTTAGGTAACCATGAAGAGAGGCAGATCTaGTGGGAGGGTTGGTCTGCC +
Preference number: 4 (lower is better)
Translates to: SRSGSVSLSSLIGFLGNHEERQI*WEGWSA
Trigger: GGCAGACCAACCCTCCCATCAGATCTGCCTCTCTTC...ATGGTTACCTAAGAAGCCAATGAGGCTGGACAAGGAGACACTGCCAGACCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549155.6
CDS-3UTR GCA 90 bp ACGCCAGTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACAGACTCTTTCTCCATTTaGAATCCTTCTGCTCTAATG +
Preference number: 4 (lower is better)
Translates to: TPVLYWMLPLLRPPVSATDSFSI*NPSALM
Trigger: CATTAGAGCAGAAGGATTGCAAATGGAGAAAGAGTC...TGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR GCA 90 bp CAGCAGTGTGACTCCAACGCCAGTCCTCTACTGGATGCTGCCCCTCCTGCGGCCACCATCTCCGAAACCTaGTTATTTGTTTATCGATCC +
Preference number: 4 (lower is better)
Translates to: QQCDSNASPLLDAAPPAATISET*LFVYRS
Trigger: GGATCGATAAACAAATAAGCAGGTTTCGGAGATGGT...GGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGGCGTTGGAGTCACACTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR GCA 90 bp ACGCCAGTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACAACCATCTCCGAAACCTaGTTATTTGTTTATCGATCC +
Preference number: 4 (lower is better)
Translates to: TPVLYWMLPLLRPPVSATTISET*LFVYRS
Trigger: GGATCGATAAACAAATAAGCAGGTTTCGGAGATGGT...TGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR GCA 90 bp GTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGCACTTCTTCCGAGGAAGAATaGGATGTAAAATGTGGAGCT +
Preference number: 4 (lower is better)
Translates to: VLYWMLPLLRPPVSATCTSSEEE*DVKCGA
Trigger: AGCTCCACATTTTACATCGCATTCTTCCTCGGAAGA...AGTGCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR GCA 90 bp GTGATTTCACAGCAGTGTGACTCCAACGCCAGTCCTCTACTGGATGCTGCCCCTCCAACCATGCACTTTTaGCCAGCTTCTCCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: VISQQCDSNASPLLDAAPPTMHF*PASPWP
Trigger: AGGCCAAGGAGAAGCTGGGCAAAAGTGCATGGTTGG...AGGGGCAGCATCCAGTAGAGGACTGGCGTTGGAGTCACACTGCTGTGAAATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR GCA 90 bp GATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGCACTGTGGTTGCATTGAGACGTTCCAGTTCTaGTTCATACATCATCTCCTG +
Preference number: 4 (lower is better)
Translates to: DAAPPAAAGICNMHCGCIETFQF*FIHHLL
Trigger: CAGGAGATGATGTATGAAGCAGAACTGGAACGTCTC...AATGCAACCACAGTGCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR GCA 90 bp CAGCAGTGTGACTCCAACGCCAGTCCTCTACTGGATGCTGCCCCTCCTGCGGCCCATAATGTGCATGCTTaGTTGGTCAAGAATGGTCTA +
Preference number: 4 (lower is better)
Translates to: QQCDSNASPLLDAAPPAAHNVHA*LVKNGL
Trigger: TAGACCATTCTTGACCAAGCAAGCATGCACATTATG...GGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGGCGTTGGAGTCACACTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR GCA 90 bp ACGCCAGTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACACATAATGTGCATGCTTaGTTGGTCAAGAATGGTCTA +
Preference number: 4 (lower is better)
Translates to: TPVLYWMLPLLRPPVSATHNVHA*LVKNGL
Trigger: TAGACCATTCTTGACCAAGCAAGCATGCACATTATG...TGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR CCA 90 bp GTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGCACTACAAGATCCAAAGGTTaGTATTTATACCACACGCCC +
Preference number: 4 (lower is better)
Translates to: VLYWMLPLLRPPVSATCTTRSKG*YLYHTP
Trigger: GGGCGTGTGGTATAAATACCAACCTTTGGATCTTGT...AGTGCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CCA 90 bp CAGCAGTGTGACTCCAACGCCAGTCCTCTACTGGATGCTGCCCCTCCTGCGGCCCCATTGTCAAAAAGGTaGGTTACCTTGGCATATACA +
Preference number: 4 (lower is better)
Translates to: QQCDSNASPLLDAAPPAAPLSKR*VTLAYT
Trigger: TGTATATGCCAAGGTAACCCACCTTTTTGACAATGG...GGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGGCGTTGGAGTCACACTGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CCA 90 bp ACGCCAGTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACACCATTGTCAAAAAGGTaGGTTACCTTGGCATATACA +
Preference number: 4 (lower is better)
Translates to: TPVLYWMLPLLRPPVSATPLSKR*VTLAYT
Trigger: TGTATATGCCAAGGTAACCCACCTTTTTGACAATGG...TGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGGCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CCA 90 bp AACGCCAGTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACTGGCTTTCCAGAAATTaGATTCATCCGCTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: NASPLLDAAPPAAAGICNWLSRN*IHPLFL
Trigger: AAGAAAGAGCGGATGAATCCAATTTCTGGAAAGCCA...GTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGGCGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CCA 90 bp ATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGCACTGTGGTTGCATTTACACAGCAGTCCCTGTaGTTGCAACCTGAGAGTTAT +
Preference number: 4 (lower is better)
Translates to: MLPLLRPPVSATCTVVAFTQQSL*LQPESY
Trigger: ATAACTCTCAGGTTGCAACCACAGGGACTGCTGTGT...AAATGCAACCACAGTGCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CCA 90 bp GTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGCACTGAAATACAGACAAGCTaGCATTCACATAGCCAACCA +
Preference number: 4 (lower is better)
Translates to: VLYWMLPLLRPPVSATCTEIQTS*HSHSQP
Trigger: TGGTTGGCTATGTGAATGCCAGCTTGTCTGTATTTC...AGTGCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR CCA 90 bp ATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGCACTGTGGTTGCATTTTCCTTTCGTTCCTTCTaGAGACGTTCCAGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: MLPLLRPPVSATCTVVAFSFRSF*RRSSSA
Trigger: AGCAGAACTGGAACGTCTCCAGAAGGAACGAAAGGA...AAATGCAACCACAGTGCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR CCA 90 bp GATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGCACTGTGGTTGCATTAAAGGGACTATTTTATaGTCACGGCCACTCGTTGTG +
Preference number: 4 (lower is better)
Translates to: DAAPPAAAGICNMHCGCIKGTIL*SRPLVV
Trigger: CACAACGAGTGGCCGTGACCATAAAATAGTCCCTTT...AATGCAACCACAGTGCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR CCA 90 bp TGTAGCAGTCATTCTCCTCCAGGTCTGGCAGTGTCTCCTTGTCCAGCCTCATTGGACAAAGGTGTGGCCTaGTCAGTCTTGCGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: CSSHSPPGLAVSPCPASLDKGVA*SVLRVK
Trigger: CTTCACCCGCAAGACTGACCAGGCCACACCTTTGTC...CAATGAGGCTGGACAAGGAGACACTGCCAGACCTGGAGGAGAATGACTGCTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549155.6
CDS-3UTR TCA 90 bp GGACCATATGATGACATTCTAGGAATGTGTGTCCATGTGTCTGAATACCCTTTTAGGCAGGCGACGACGTaGCGCTGGGCGGCTTGCCAC +
Preference number: 4 (lower is better)
Translates to: GPYDDILGMCVHVSEYPFRQATT*RWAACH
Trigger: GTGGCAAGCCGCCCAGCGTCACGTCGTCGCCTGCCT...AAAAGGGTATTCAGACACATGGACACACATTCCTAGAATGTCATCATATGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR TCA 90 bp GCTTTTGCACAGCCAGAAGAAGTAAACAGAATTCAGGTCCTTGGCCTGGAAAGGGCCATAGGGCACCAGTaGATGAGGCGGGTCACGGTA +
Preference number: 4 (lower is better)
Translates to: AFAQPEEVNRIQVLGLERAIGHQ*MRRVTV
Trigger: TACCGTGACCCGCCTCATTCACTGGTGCCCTATGGC...CCTTTCCAGGCCAAGGACCTGAATTCTGTTTACTTCTTCTGGCTGTGCAAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR GCA 90 bp TGTAGCAGTCATTCTCCTCCAGGTCTGGCAGTGTCTCCTTGTCCAGCCTCATTGCCCCGGCTTCCAATCTaGTGGCATCATCTGAAGTAC +
Preference number: 4 (lower is better)
Translates to: CSSHSPPGLAVSPCPASLPRLPI*WHHLKY
Trigger: GTACTTCAGATGATGCCAGCAGATTGGAAGCCGGGG...CAATGAGGCTGGACAAGGAGACACTGCCAGACCTGGAGGAGAATGACTGCTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549155.6
CDS-3UTR GCA 90 bp ATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGCACTGTGGTTGCATTTGAGACGTTCCAGTTCTaGTTCATACATCATCTCCTG +
Preference number: 4 (lower is better)
Translates to: MLPLLRPPVSATCTVVAFETFQF*FIHHLL
Trigger: CAGGAGATGATGTATGAAGCAGAACTGGAACGTCTC...AAATGCAACCACAGTGCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR GCA 90 bp CCAGAAGAAGTAAACAGAATTCAGGTCCTTGGCCTGGAAAGGGACTATTTTATGTCCTCTACTGGATGCTaGCCCTCCTGCGGCCGCCGG +
Preference number: 4 (lower is better)
Translates to: PEEVNRIQVLGLERDYFMSSTGC*PSCGRR
Trigger: CCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGA...CATAAAATAGTCCCTTTCCAGGCCAAGGACCTGAATTCTGTTTACTTCTTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR GCA 90 bp ACTGCCCATAATGTGCATGCTTGCTTGGTCAAGAATGGTCTATGGATAGATAGCCAGTCCTCTACTGGATaGTGCCCCTCCTGCGGCCGC +
Preference number: 4 (lower is better)
Translates to: TAHNVHACLVKNGLWIDSQSSTG*CPSCGR
Trigger: GCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTG...GCTATCTATCCATAGACCATTCTTGACCAAGCAAGCATGCACATTATGGGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR GCA 90 bp GAAAGGGGCAGTGTAGCAGTCATTCTCCTCCAGGTCTGGCAGTGTCTCCTTGTCGTACACAGGGATGCCTaGATCTTTGGAGACGAAGAG +
Preference number: 4 (lower is better)
Translates to: ERGSVAVILLQVWQCLLVVHRDA*IFGDEE
Trigger: CTCTTCGTCTCCAAAGATGCAGGCATCCCTGTGTAC...GACAAGGAGACACTGCCAGACCTGGAGGAGAATGACTGCTACACTGCCCCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549155.6
CDS-3UTR GCA 90 bp TGTAGCAGTCATTCTCCTCCAGGTCTGGCAGTGTCTCCTTGTCCAGCCTCATTGGGTGGTACACAGGGATaGCTGCATCTTTGGAGACGA +
Preference number: 4 (lower is better)
Translates to: CSSHSPPGLAVSPCPASLGGTQG*LHLWRR
Trigger: TCGTCTCCAAAGATGCAGGCATCCCTGTGTACCACC...CAATGAGGCTGGACAAGGAGACACTGCCAGACCTGGAGGAGAATGACTGCTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549155.6
CDS-3UTR CCA 90 bp ACGCCAGTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACAATGATATCTGTAGCTTaGCAGACTTCTTTACTGACT +
Preference number: 4 (lower is better)
Translates to: TPVLYWMLPLLRPPVSATMISVA*QTSLLT
Trigger: AGTCAGTAAAGAAGTCTGCCAAGCTACAGATATCAT...TGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGGCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CCA 90 bp GTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGCACTTCATCCGCTCTTTCTTaGAATACTTGGCTTCAAACT +
Preference number: 4 (lower is better)
Translates to: VLYWMLPLLRPPVSATCTSSALS*NTWLQT
Trigger: AGTTTGAAGCCAAGTATTCCAAGAAAGAGCGGATGA...AGTGCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CCA 90 bp CCAGTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGCTGCTTGATAAGGTTCTaGCTTTCCAGAAATTGGATT +
Preference number: 4 (lower is better)
Translates to: PVLYWMLPLLRPPVSATCCLIRF*LSRNWI
Trigger: AATCCAATTTCTGGAAAGCCAGAACCTTATCAAGCA...GCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CCA 90 bp GTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGCACTAAATTCCTATGTCTTTaGCCCTTGAAGCTAAAGGTC +
Preference number: 4 (lower is better)
Translates to: VLYWMLPLLRPPVSATCTKFLCL*PLKLKV
Trigger: GACCTTTAGCTTCAAGGGCCAAAGACATAGGAATTT...AGTGCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CCA 90 bp GTGATTTCACAGCAGTGTGACTCCAACGCCAGTCCTCTACTGGATGCTGCCCCTCACGGCCACTCGTTGTaGTGTGCTTTTCCATTCTTC +
Preference number: 4 (lower is better)
Translates to: VISQQCDSNASPLLDAAPHGHSL*CAFPFF
Trigger: GAAGAATGGAAAAGCACACCACAACGAGTGGCCGTG...AGGGGCAGCATCCAGTAGAGGACTGGCGTTGGAGTCACACTGCTGTGAAATCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR CCA 90 bp ATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGCACTGTGGTTGCATTTTTCAGGTCCTTGGCCTaGAAAGGGACTATTTTATGG +
Preference number: 4 (lower is better)
Translates to: MLPLLRPPVSATCTVVAFFRSLA*KGTILW
Trigger: CCATAAAATAGTCCCTTTCCAGGCCAAGGACCTGAA...AAATGCAACCACAGTGCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR CCA 90 bp ATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGCACTGTGGTTGCATTTCAGAATTCAGGTCCTTaGCCTGGAAAGGGACTATTT +
Preference number: 4 (lower is better)
Translates to: MLPLLRPPVSATCTVVAFQNSGP*PGKGLF
Trigger: AAATAGTCCCTTTCCAGGCCAAGGACCTGAATTCTG...AAATGCAACCACAGTGCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR TCA 90 bp GATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGCACTGTGGTTGCATTCGCTTTTCAGCCCCATaGATAGATAAACTTAAACCA +
Preference number: 4 (lower is better)
Translates to: DAAPPAAAGICNMHCGCIRFSAP*IDKLKP
Trigger: TGGTTTAAGTTTATCTATTCATGGGGCTGAAAAGCG...AATGCAACCACAGTGCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392977.8
ENST00000392979.7
CDS-3UTR TCA 90 bp ATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGCACTGTGGTTGCATTTCTTTGCAAGGACTGCTaGCAGCTTCTAATTCATCAA +
Preference number: 4 (lower is better)
Translates to: MLPLLRPPVSATCTVVAFLCKDC*QLLIHQ
Trigger: TTGATGAATTAGAAGCTGTCAGCAGTCCTTGCAAAG...AAATGCAACCACAGTGCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR TCA 90 bp GCAGTCATTCTCCTCCAGGTCTGGCAGTGTCTCCTTGTCCAGCCTCATTGGCTTTCTGCTGGCATCATCTaGAGTACTAGTCAGGTTTCC +
Preference number: 4 (lower is better)
Translates to: AVILLQVWQCLLVQPHWLSAGII*STSQVS
Trigger: GGAAACCTGACTAGTACTTCAGATGATGCCAGCAGA...AAGCCAATGAGGCTGGACAAGGAGACACTGCCAGACCTGGAGGAGAATGACTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549155.6
CDS-3UTR GCA 90 bp CAGCAGTGTGACTCCAACGCCAGTCCTCTACTGGATGCTGCCCCTCCTGCGGCCAGATATGAAATGAGGTaGTTTATACAAAACACGAGG +
Preference number: 4 (lower is better)
Translates to: QQCDSNASPLLDAAPPAARYEMR*FIQNTR
Trigger: CCTCGTGTTTTGTATAAAGCACCTCATTTCATATCT...GGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGGCGTTGGAGTCACACTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR GCA 90 bp ACGCCAGTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACAAACATGCACTGTGGTTaGATTTTTAGTCATTCACTT +
Preference number: 4 (lower is better)
Translates to: TPVLYWMLPLLRPPVSATNMHCG*IFSHSL
Trigger: AAGTGAATGACTAAAAATGCAACCACAGTGCATGTT...TGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGGCGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR GCA 90 bp GTGATTTCACAGCAGTGTGACTCCAACGCCAGTCCTCTACTGGATGCTGCCCCTAATTGTGCGCTGGACTaGAACGTGATTTCACAGCAG +
Preference number: 4 (lower is better)
Translates to: VISQQCDSNASPLLDAAPNCALD*NVISQQ
Trigger: CTGCTGTGAAATCACGTTGCAGTCCAGCGCACAATT...AGGGGCAGCATCCAGTAGAGGACTGGCGTTGGAGTCACACTGCTGTGAAATCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR GCA 90 bp ATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGCACTGTGGTTGCATTTGGTTATAACTTCCGCTaGTCACATCTTTGTCGTATG +
Preference number: 4 (lower is better)
Translates to: MLPLLRPPVSATCTVVAFGYNFR*SHLCRM
Trigger: CATACGACAAAGATGTGAGCAGCGGAAGTTATAACC...AAATGCAACCACAGTGCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644049.1
CDS-3UTR CCA 90 bp GTGATTTCACAGCAGTGTGACTCCAACGCCAGTCCTCTACTGGATGCTGCCCCTTCCTTTCGTTCCTTCTaGAGACGTTCCAGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: VISQQCDSNASPLLDAAPSFRSF*RRSSSA
Trigger: AGCAGAACTGGAACGTCTCCAGAAGGAACGAAAGGA...AGGGGCAGCATCCAGTAGAGGACTGGCGTTGGAGTCACACTGCTGTGAAATCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR TCA 90 bp TTTGTTGTGTATGATGAAGTGATGGATCCTTTGCTGGCTGAAAGGGGCAGTGTATCTGCCTGGTGGGAGTaGGGAATGCCTGACCACAGG +
Preference number: 4 (lower is better)
Translates to: FVVYDEVMDPLLAERGSVSAWWE*GMPDHR
Trigger: CCTGTGGTCAGGCATTCCTCACTCCCACCAGGCAGA...TACACTGCCCCTTTCAGCCAGCAAAGGATCCATCACTTCATCATACACAACAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549155.6
CDS-3UTR TCA 90 bp GTGATTTCACAGCAGTGTGACTCCAACGCCAGTCCTCTACTGGATGCTGCCCCTTGTGATCCAGAGTGGTaGCGCCATACAAAAAGACAA +
Preference number: 4 (lower is better)
Translates to: VISQQCDSNASPLLDAAPCDPEW*RHTKRQ
Trigger: TTGTCTTTTTGTATGGCGTCACCACTCTGGATCACA...AGGGGCAGCATCCAGTAGAGGACTGGCGTTGGAGTCACACTGCTGTGAAATCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR TCA 90 bp GTGATTTCACAGCAGTGTGACTCCAACGCCAGTCCTCTACTGGATGCTGCCCCTCCTGTGGTTGCAACCTaGGAGTTATTCCTGATTAAC +
Preference number: 4 (lower is better)
Translates to: VISQQCDSNASPLLDAAPPVVAT*ELFLIN
Trigger: GTTAATCAGGAATAACTCTCAGGTTGCAACCACAGG...AGGGGCAGCATCCAGTAGAGGACTGGCGTTGGAGTCACACTGCTGTGAAATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR TCA 90 bp ACTGCCCATAATGTGCATGCTTGCTTGGTCAAGAATGGTCTATGGATAGATAGCGCCATAGGGCACCAGTaGATGAGGCGGGTCACGGTA +
Preference number: 4 (lower is better)
Translates to: TAHNVHACLVKNGLWIDSAIGHQ*MRRVTV
Trigger: TACCGTGACCCGCCTCATTCACTGGTGCCCTATGGC...GCTATCTATCCATAGACCATTCTTGACCAAGCAAGCATGCACATTATGGGCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR GCA 90 bp GAGAATGTAACTGCCCATAATGTGCATGCTTGCTTGGTCAAGAATGGTCTATGGCAGCTGGGAAGAGCATaGCGGTGTACCAGCCCAACC +
Preference number: 4 (lower is better)
Translates to: ENVTAHNVHACLVKNGLWQLGRA*RCTSPT
Trigger: GGTTGGGCTGGTACACCGGCATGCTCTTCCCAGCTG...CCATAGACCATTCTTGACCAAGCAAGCATGCACATTATGGGCAGTTACATTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR GCA 90 bp ACTGCCCATAATGTGCATGCTTGCTTGGTCAAGAATGGTCTATGGATAGATAGCCAGCTGGGAAGAGCATaGCGGTGTACCAGCCCAACC +
Preference number: 4 (lower is better)
Translates to: TAHNVHACLVKNGLWIDSQLGRA*RCTSPT
Trigger: GGTTGGGCTGGTACACCGGCATGCTCTTCCCAGCTG...GCTATCTATCCATAGACCATTCTTGACCAAGCAAGCATGCACATTATGGGCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR GCA 90 bp GTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGCACTAGATATGAAATGAGGTaGTTTATACAAAACACGAGG +
Preference number: 4 (lower is better)
Translates to: VLYWMLPLLRPPVSATCTRYEMR*FIQNTR
Trigger: CCTCGTGTTTTGTATAAAGCACCTCATTTCATATCT...AGTGCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR GCA 90 bp TGCAACATGCACTGTGGTTGCATTTTTAGTCATTCACTTGAGTGTGCTTTTGCACAGTCCTCTACTGGATaGTGCCCCTCCTGCGGCCGC +
Preference number: 4 (lower is better)
Translates to: CNMHCGCIFSHSLECAFAQSSTG*CPSCGR
Trigger: GCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTG...TGCAAAAGCACACTCAAGTGAATGACTAAAAATGCAACCACAGTGCATGTTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR GCA 90 bp TCATTCTCCTCCAGGTCTGGCAGTGTCTCCTTGTCCAGCCTCATTGGCTTCTTATCAGGGTTTCCTGGCTaGTACTGCTGTAAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: SFSSRSGSVSLSSLIGFLSGFPG*YCCKKA
Trigger: TGCCTTCTTACAGCAGTAGCAGCCAGGAAACCCTGA...TAAGAAGCCAATGAGGCTGGACAAGGAGACACTGCCAGACCTGGAGGAGAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549155.6
CDS-3UTR CCA 90 bp ATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGCACTGTGGTTGCATTTTGGTTTTCTGCTCCATaGGTTCGAATGGAGTTTTTA +
Preference number: 4 (lower is better)
Translates to: MLPLLRPPVSATCTVVAFWFSAP*VRMEFL
Trigger: TAAAAACTCCATTCGAACCCATGGAGCAGAAAACCA...AAATGCAACCACAGTGCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CCA 90 bp GGTGACATGGAATTAGGACCATATGATGACATTCTAGGAATGTGTGTCCATGTGACGCCAGTCCTCTACTaGATGCTGCCCCTCCTGCGG +
Preference number: 4 (lower is better)
Translates to: GDMELGPYDDILGMCVHVTPVLY*MLPLLR
Trigger: CCGCAGGAGGGGCAGCATCCAGTAGAGGACTGGCGT...CACATGGACACACATTCCTAGAATGTCATCATATGGTCCTAATTCCATGTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000575847.8
CDS-3UTR CCA 90 bp TCATTCTCCTCCAGGTCTGGCAGTGTCTCCTTGTCCAGCCTCATTGGCTTCTTAGGATGCCTGCATCTTTaGAGACGAAGAGAGGCAGAT +
Preference number: 4 (lower is better)
Translates to: SFSSRSGSVSLSSLIGFLGCLHL*RRREAD
Trigger: ATCTGCCTCTCTTCGTCTCCAAAGATGCAGGCATCC...TAAGAAGCCAATGAGGCTGGACAAGGAGACACTGCCAGACCTGGAGGAGAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549155.6
CDS-3UTR TCA 90 bp GCTTTTGCACAGCCAGAAGAAGTAAACAGAATTCAGGTCCTTGGCCTGGAAAGGGAAAGAAATCCACTGTaGACCTCCAGGCTCCAGTCG +
Preference number: 4 (lower is better)
Translates to: AFAQPEEVNRIQVLGLERERNPL*TSRLQS
Trigger: CGACTGGAGCCTGGAGGTTCACAGTGGATTTCTTTC...CCTTTCCAGGCCAAGGACCTGAATTCTGTTTACTTCTTCTGGCTGTGCAAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392977.8
ENST00000392979.7
CDS-3UTR TCA 90 bp GGTTGCATTTTTAGTCATTCACTTGAGTGTGCTTTTGCACAGCCAGAAGAAGTAGGAGTGAGGAATGCCTaGCCACAGGCAGGCGACGAC +
Preference number: 4 (lower is better)
Translates to: GCIFSHSLECAFAQPEEVGVRNA*PQAGDD
Trigger: GTCGTCGCCTGCCTGTGGTCAGGCATTCCTCACTCC...TACTTCTTCTGGCTGTGCAAAAGCACACTCAAGTGAATGACTAAAAATGCAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR TCA 90 bp CCAGAAGAAGTAAACAGAATTCAGGTCCTTGGCCTGGAAAGGGACTATTTTATGTCTGCCTGGTGGGAGTaGGGAATGCCTGACCACAGG +
Preference number: 4 (lower is better)
Translates to: PEEVNRIQVLGLERDYFMSAWWE*GMPDHR
Trigger: CCTGTGGTCAGGCATTCCTCACTCCCACCAGGCAGA...CATAAAATAGTCCCTTTCCAGGCCAAGGACCTGAATTCTGTTTACTTCTTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR TCA 90 bp CTTGAGAATGTAACTGCCCATAATGTGCATGCTTGCTTGGTCAAGAATGGTCTAGCCATAGGGCACCAGTaGATGAGGCGGGTCACGGTA +
Preference number: 4 (lower is better)
Translates to: LENVTAHNVHACLVKNGLAIGHQ*MRRVTV
Trigger: TACCGTGACCCGCCTCATTCACTGGTGCCCTATGGC...TAGACCATTCTTGACCAAGCAAGCATGCACATTATGGGCAGTTACATTCTCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR TCA 90 bp GAGAATGTAACTGCCCATAATGTGCATGCTTGCTTGGTCAAGAATGGTCTATGGGGTCAGTCTTGCGGGTaGAGGATCGGTGGTACACAG +
Preference number: 4 (lower is better)
Translates to: ENVTAHNVHACLVKNGLWGQSCG*RIGGTQ
Trigger: CTGTGTACCACCGATCCTTCACCCGCAAGACTGACC...CCATAGACCATTCTTGACCAAGCAAGCATGCACATTATGGGCAGTTACATTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644049.1
CDS-3UTR GCA 90 bp CCAGAAGAAGTAAACAGAATTCAGGTCCTTGGCCTGGAAAGGGACTATTTTATGCAGCTGGGAAGAGCATaGCGGTGTACCAGCCCAACC +
Preference number: 4 (lower is better)
Translates to: PEEVNRIQVLGLERDYFMQLGRA*RCTSPT
Trigger: GGTTGGGCTGGTACACCGGCATGCTCTTCCCAGCTG...CATAAAATAGTCCCTTTCCAGGCCAAGGACCTGAATTCTGTTTACTTCTTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR GCA 90 bp TCATTCTCCTCCAGGTCTGGCAGTGTCTCCTTGTCCAGCCTCATTGGCTTCTTAGTAGCTGCCCGTCGTTaGAGAGGAAAGGTTATAACT +
Preference number: 4 (lower is better)
Translates to: SFSSRSGSVSLSSLIGFLVAARR*RGKVIT
Trigger: AGTTATAACCTTTCCTCTGCAACGACGGGCAGCTAC...TAAGAAGCCAATGAGGCTGGACAAGGAGACACTGCCAGACCTGGAGGAGAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549155.6
CDS-3UTR GCA 90 bp CTTGAGAATGTAACTGCCCATAATGTGCATGCTTGCTTGGTCAAGAATGGTCTAGTGGGTAAGCCCAATTaGCACAGGCCCCGCAACGTC +
Preference number: 4 (lower is better)
Translates to: LENVTAHNVHACLVKNGLVGKPN*HRPRNV
Trigger: GACGTTGCGGGGCCTGTGGCAATTGGGCTTACCCAC...TAGACCATTCTTGACCAAGCAAGCATGCACATTATGGGCAGTTACATTCTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644049.1
CDS-3UTR CCA 90 bp TGTAGCAGTCATTCTCCTCCAGGTCTGGCAGTGTCTCCTTGTCCAGCCTCATTGACACCTCCTTCTGGGTaGAAGACTTTGGTTTTTCCA +
Preference number: 4 (lower is better)
Translates to: CSSHSPPGLAVSPCPASLTPPSG*KTLVFP
Trigger: TGGAAAAACCAAAGTCTTCCACCCAGAAGGAGGTGT...CAATGAGGCTGGACAAGGAGACACTGCCAGACCTGGAGGAGAATGACTGCTACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000549155.6
CDS-3UTR CCA 90 bp TCCAGGTCTGGCAGTGTCTCCTTGTCCAGCCTCATTGGCTTCTTAGGTAACCATTCCAAGGACTTCCCATaGGGCATGCAACTTCACAAA +
Preference number: 4 (lower is better)
Translates to: SRSGSVSLSSLIGFLGNHSKDFP*GMQLHK
Trigger: TTTGTGAAGTTGCATGCCCCATGGGAAGTCCTTGGA...ATGGTTACCTAAGAAGCCAATGAGGCTGGACAAGGAGACACTGCCAGACCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549155.6
CDS-3UTR CCA 90 bp GCTTTTGCACAGCCAGAAGAAGTAAACAGAATTCAGGTCCTTGGCCTGGAAAGGATTCTCCTCCAGGTCTaGCAGTGTCTCCTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: AFAQPEEVNRIQVLGLERILLQV*QCLLVQ
Trigger: CTGGACAAGGAGACACTGCCAGACCTGGAGGAGAAT...CCTTTCCAGGCCAAGGACCTGAATTCTGTTTACTTCTTCTGGCTGTGCAAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CCA 90 bp AGCAGTCATTCTCCTCCAGGTCTGGCAGTGTCTCCTTGTCCAGCCTCATTGGCTTATGGATTTTTCCAGTaGGTAAGCCCAATTGCCACA +
Preference number: 4 (lower is better)
Translates to: SSHSPPGLAVSPCPASLAYGFFQ*VSPIAT
Trigger: TGTGGCAATTGGGCTTACCCACTGGAAAAATCCATA...AGCCAATGAGGCTGGACAAGGAGACACTGCCAGACCTGGAGGAGAATGACTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000549155.6
CDS-3UTR TCA 90 bp GAGAATGTAACTGCCCATAATGTGCATGCTTGCTTGGTCAAGAATGGTCTATGGGGATCCTTTGCTGGCTaGAAGGGGCAGTGTAGCAGT +
Preference number: 4 (lower is better)
Translates to: ENVTAHNVHACLVKNGLWGSFAG*KGQCSS
Trigger: ACTGCTACACTGCCCCTTTCAGCCAGCAAAGGATCC...CCATAGACCATTCTTGACCAAGCAAGCATGCACATTATGGGCAGTTACATTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR TCA 90 bp GTGATTTCACAGCAGTGTGACTCCAACGCCAGTCCTCTACTGGATGCTGCCCCTGTCTGGGATCAGATATaGAATGAGGTGCTTTATACA +
Preference number: 4 (lower is better)
Translates to: VISQQCDSNASPLLDAAPVWDQI*NEVLYT
Trigger: TGTATAAAGCACCTCATTTCATATCTGATCCCAGAC...AGGGGCAGCATCCAGTAGAGGACTGGCGTTGGAGTCACACTGCTGTGAAATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR TCA 90 bp TTGTTTATCGATCCTGCTCATGAACTTGTAACGGCGGGGCAGGTAATAGATTTTGGTCAGTCTTGCGGGTaGAGGATCGGTGGTACACAG +
Preference number: 4 (lower is better)
Translates to: LFIDPAHELVTAGQVIDFGQSCG*RIGGTQ
Trigger: CTGTGTACCACCGATCCTTCACCCGCAAGACTGACC...AAAATCTATTACCTGCCCCGCCGTTACAAGTTCATGAGCAGGATCGATAAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549155.6
CDS-3UTR GCA 90 bp GAGAATGTAACTGCCCATAATGTGCATGCTTGCTTGGTCAAGAATGGTCTATGGGGGATCCTTCCTCAGTaGCTTGGTGTCTTCGGCAGA +
Preference number: 4 (lower is better)
Translates to: ENVTAHNVHACLVKNGLWGILPQ*LGVFGR
Trigger: TCTGCCGAAGACACCAAGGCACTGAGGAAGGATCCC...CCATAGACCATTCTTGACCAAGCAAGCATGCACATTATGGGCAGTTACATTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392977.8
ENST00000392979.7
CDS-3UTR GCA 90 bp GGACCATATGATGACATTCTAGGAATGTGTGTCCATGTGTCTGAATACCCTTTTGGTGGGAGTGAGGAATaGCTGACCACAGGCAGGCGA +
Preference number: 4 (lower is better)
Translates to: GPYDDILGMCVHVSEYPFGGSEE*LTTGRR
Trigger: TCGCCTGCCTGTGGTCAGGCATTCCTCACTCCCACC...AAAAGGGTATTCAGACACATGGACACACATTCCTAGAATGTCATCATATGGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR GCA 90 bp GAAAGGGGCAGTGTAGCAGTCATTCTCCTCCAGGTCTGGCAGTGTCTCCTTGTCGACTCTTTCTCCATTTaGAATCCTTCTGCTCTAATG +
Preference number: 4 (lower is better)
Translates to: ERGSVAVILLQVWQCLLVDSFSI*NPSALM
Trigger: CATTAGAGCAGAAGGATTGCAAATGGAGAAAGAGTC...GACAAGGAGACACTGCCAGACCTGGAGGAGAATGACTGCTACACTGCCCCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549155.6
CDS-3UTR GCA 90 bp GAATGTGTGTCCATGTGTCTGAATACCCTTTTTAGCCCAGTGTCTGTAAAATTCGCGGCCGCCGGTATCTaGAACATGCACTGTGGTTGC +
Preference number: 4 (lower is better)
Translates to: ECVSMCLNTLFSPVSVKFAAAGI*NMHCGC
Trigger: GCAACCACAGTGCATGTTGCAGATACCGGCGGCCGC...GAATTTTACAGACACTGGGCTAAAAAGGGTATTCAGACACATGGACACACATTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR GCA 90 bp TGCAACATGCACTGTGGTTGCATTTTTAGTCATTCACTTGAGTGTGCTTTTGCAGCGGCCGCCGGTATCTaGAACATGCACTGTGGTTGC +
Preference number: 4 (lower is better)
Translates to: CNMHCGCIFSHSLECAFAAAAGI*NMHCGC
Trigger: GCAACCACAGTGCATGTTGCAGATACCGGCGGCCGC...TGCAAAAGCACACTCAAGTGAATGACTAAAAATGCAACCACAGTGCATGTTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR GCA 90 bp GGTTGCATTTTTAGTCATTCACTTGAGTGTGCTTTTGCACAGCCAGAAGAAGTAGCGGCCGCCGGTATCTaGAACATGCACTGTGGTTGC +
Preference number: 4 (lower is better)
Translates to: GCIFSHSLECAFAQPEEVAAAGI*NMHCGC
Trigger: GCAACCACAGTGCATGTTGCAGATACCGGCGGCCGC...TACTTCTTCTGGCTGTGCAAAAGCACACTCAAGTGAATGACTAAAAATGCAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR GCA 90 bp GTGATTTCACAGCAGTGTGACTCCAACGCCAGTCCTCTACTGGATGCTGCCCCTCATAATGTGCATGCTTaGTTGGTCAAGAATGGTCTA +
Preference number: 4 (lower is better)
Translates to: VISQQCDSNASPLLDAAPHNVHA*LVKNGL
Trigger: TAGACCATTCTTGACCAAGCAAGCATGCACATTATG...AGGGGCAGCATCCAGTAGAGGACTGGCGTTGGAGTCACACTGCTGTGAAATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR CCA 90 bp GTGATTTCACAGCAGTGTGACTCCAACGCCAGTCCTCTACTGGATGCTGCCCCTGTCAAGAATGGTCTATaGATAGATAGCAATTGTGCG +
Preference number: 4 (lower is better)
Translates to: VISQQCDSNASPLLDAAPVKNGL*IDSNCA
Trigger: CGCACAATTGCTATCTATCCATAGACCATTCTTGAC...AGGGGCAGCATCCAGTAGAGGACTGGCGTTGGAGTCACACTGCTGTGAAATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR TCA 90 bp ACTGCCCATAATGTGCATGCTTGCTTGGTCAAGAATGGTCTATGGATAGATAGCTATCGATCCTGCTCATaGACTTGTAACGGCGGGGCA +
Preference number: 4 (lower is better)
Translates to: TAHNVHACLVKNGLWIDSYRSCS*TCNGGA
Trigger: TGCCCCGCCGTTACAAGTTCATGAGCAGGATCGATA...GCTATCTATCCATAGACCATTCTTGACCAAGCAAGCATGCACATTATGGGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR TCA 90 bp GAGAATGTAACTGCCCATAATGTGCATGCTTGCTTGGTCAAGAATGGTCTATGGTTACTGACTTGGCTGTaGTCCAGAGTGGTGACGCCA +
Preference number: 4 (lower is better)
Translates to: ENVTAHNVHACLVKNGLWLLTWL*SRVVTP
Trigger: TGGCGTCACCACTCTGGATCACAGCCAAGTCAGTAA...CCATAGACCATTCTTGACCAAGCAAGCATGCACATTATGGGCAGTTACATTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR TCA 90 bp GCTTTTGCACAGCCAGAAGAAGTAAACAGAATTCAGGTCCTTGGCCTGGAAAGGGAAACATTTTCAGGGTaGAGCTGTTCTCCCACTCAG +
Preference number: 4 (lower is better)
Translates to: AFAQPEEVNRIQVLGLERETFSG*SCSPTQ
Trigger: CTGAGTGGGAGAACAGCTTCACCCTGAAAATGTTTC...CCTTTCCAGGCCAAGGACCTGAATTCTGTTTACTTCTTCTGGCTGTGCAAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR GCA 90 bp TCCAGGTCTGGCAGTGTCTCCTTGTCCAGCCTCATTGGCTTCTTAGGTAACCATACTTCCCATGGGGCATaGAACTTCACAAAGATAATG +
Preference number: 4 (lower is better)
Translates to: SRSGSVSLSSLIGFLGNHTSHGA*NFTKIM
Trigger: CATTATCTTTGTGAAGTTGCATGCCCCATGGGAAGT...ATGGTTACCTAAGAAGCCAATGAGGCTGGACAAGGAGACACTGCCAGACCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549155.6
CDS-3UTR GCA 90 bp GCTTTTGCACAGCCAGAAGAAGTAAACAGAATTCAGGTCCTTGGCCTGGAAAGGAGCAGTCCCTGTGGTTaGAACCTGAGAGTTATTCCT +
Preference number: 4 (lower is better)
Translates to: AFAQPEEVNRIQVLGLERSSPCG*NLRVIP
Trigger: AGGAATAACTCTCAGGTTGCAACCACAGGGACTGCT...CCTTTCCAGGCCAAGGACCTGAATTCTGTTTACTTCTTCTGGCTGTGCAAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR GCA 90 bp GAGAATGTAACTGCCCATAATGTGCATGCTTGCTTGGTCAAGAATGGTCTATGGCCAACCATGCACTTTTaGCCAGCTTCTCCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: ENVTAHNVHACLVKNGLWPTMHF*PASPWP
Trigger: AGGCCAAGGAGAAGCTGGGCAAAAGTGCATGGTTGG...CCATAGACCATTCTTGACCAAGCAAGCATGCACATTATGGGCAGTTACATTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR GCA 90 bp GAGAATGTAACTGCCCATAATGTGCATGCTTGCTTGGTCAAGAATGGTCTATGGTCCCCGAGAACTCACTaGCATCAGATTCAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: ENVTAHNVHACLVKNGLWSPRTH*HQIQAQ
Trigger: CTGAGCCTGAATCTGATGGCAGTGAGTTCTCGGGGA...CCATAGACCATTCTTGACCAAGCAAGCATGCACATTATGGGCAGTTACATTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR CCA 90 bp ACTGCCCATAATGTGCATGCTTGCTTGGTCAAGAATGGTCTATGGATAGATAGCATTCTCCTCCAGGTCTaGCAGTGTCTCCTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: TAHNVHACLVKNGLWIDSILLQV*QCLLVQ
Trigger: CTGGACAAGGAGACACTGCCAGACCTGGAGGAGAAT...GCTATCTATCCATAGACCATTCTTGACCAAGCAAGCATGCACATTATGGGCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CCA 90 bp ACTGCCCATAATGTGCATGCTTGCTTGGTCAAGAATGGTCTATGGATAGATAGCTCCAATGAAGGCAGCTaGGAAGAGCATGCCGGTGTA +
Preference number: 4 (lower is better)
Translates to: TAHNVHACLVKNGLWIDSSNEGS*EEHAGV
Trigger: TACACCGGCATGCTCTTCCCAGCTGCCTTCATTGGA...GCTATCTATCCATAGACCATTCTTGACCAAGCAAGCATGCACATTATGGGCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CCA 90 bp CTTGAGAATGTAACTGCCCATAATGTGCATGCTTGCTTGGTCAAGAATGGTCTAGACAAAGGTGTGGCCTaGTCAGTCTTGCGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: LENVTAHNVHACLVKNGLDKGVA*SVLRVK
Trigger: CTTCACCCGCAAGACTGACCAGGCCACACCTTTGTC...TAGACCATTCTTGACCAAGCAAGCATGCACATTATGGGCAGTTACATTCTCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644049.1
CDS-3UTR TCA 90 bp TTTGTTGTGTATGATGAAGTGATGGATCCTTTGCTGGCTGAAAGGGGCAGTGTATGCCTCCATTTTTATTaGCCTTCTGCCTGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: FVVYDEVMDPLLAERGSVCLHFY*PSAWWE
Trigger: CTCCCACCAGGCAGAAGGTCAATAAAAATGGAGGCA...TACACTGCCCCTTTCAGCCAGCAAAGGATCCATCACTTCATCATACACAACAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000549155.6
CDS-3UTR TCA 90 bp ACTGCCCATAATGTGCATGCTTGCTTGGTCAAGAATGGTCTATGGATAGATAGCTGCCTCCATTTTTATTaGCCTTCTGCCTGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: TAHNVHACLVKNGLWIDSCLHFY*PSAWWE
Trigger: CTCCCACCAGGCAGAAGGTCAATAAAAATGGAGGCA...GCTATCTATCCATAGACCATTCTTGACCAAGCAAGCATGCACATTATGGGCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR TCA 90 bp TGTAGCAGTCATTCTCCTCCAGGTCTGGCAGTGTCTCCTTGTCCAGCCTCATTGTGCATTAAGAATCTCTaGAAAGTCCACATCACTCTT +
Preference number: 4 (lower is better)
Translates to: CSSHSPPGLAVSPCPASLCIKNL*KVHITL
Trigger: AAGAGTGATGTGGACTTTTCAGAGATTCTTAATGCA...CAATGAGGCTGGACAAGGAGACACTGCCAGACCTGGAGGAGAATGACTGCTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549155.6
CDS-3UTR TCA 90 bp ACTGCCCATAATGTGCATGCTTGCTTGGTCAAGAATGGTCTATGGATAGATAGCGGCAGACTTCTTTACTaGCTTGGCTGTGATCCAGAG +
Preference number: 4 (lower is better)
Translates to: TAHNVHACLVKNGLWIDSGRLLY*LGCDPE
Trigger: CTCTGGATCACAGCCAAGTCAGTAAAGAAGTCTGCC...GCTATCTATCCATAGACCATTCTTGACCAAGCAAGCATGCACATTATGGGCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR TCA 90 bp GAATGTGTGTCCATGTGTCTGAATACCCTTTTTAGCCCAGTGTCTGTAAAATTCAGGCAGCGAAAGTGCTaGCAGTCACCACCCGGTAAA +
Preference number: 4 (lower is better)
Translates to: ECVSMCLNTLFSPVSVKFRQRKC*QSPPGK
Trigger: TTTACCGGGTGGTGACTGTCAGCACTTTCGCTGCCT...GAATTTTACAGACACTGGGCTAAAAAGGGTATTCAGACACATGGACACACATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR TCA 90 bp CCAGAAGAAGTAAACAGAATTCAGGTCCTTGGCCTGGAAAGGGACTATTTTATGCGCTGGACTGCAACGTaGTTTCACAGCAGTGTGACT +
Preference number: 4 (lower is better)
Translates to: PEEVNRIQVLGLERDYFMRWTAT*FHSSVT
Trigger: AGTCACACTGCTGTGAAATCACGTTGCAGTCCAGCG...CATAAAATAGTCCCTTTCCAGGCCAAGGACCTGAATTCTGTTTACTTCTTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR TCA 90 bp CTTGAGAATGTAACTGCCCATAATGTGCATGCTTGCTTGGTCAAGAATGGTCTACGCTGGACTGCAACGTaGTTTCACAGCAGTGTGACT +
Preference number: 4 (lower is better)
Translates to: LENVTAHNVHACLVKNGLRWTAT*FHSSVT
Trigger: AGTCACACTGCTGTGAAATCACGTTGCAGTCCAGCG...TAGACCATTCTTGACCAAGCAAGCATGCACATTATGGGCAGTTACATTCTCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR TCA 90 bp TCATTCTCCTCCAGGTCTGGCAGTGTCTCCTTGTCCAGCCTCATTGGCTTCTTACGCTTTTCAGCCCCATaGATAGATAAACTTAAACCT +
Preference number: 4 (lower is better)
Translates to: SFSSRSGSVSLSSLIGFLRFSAP*IDKLKP
Trigger: AGGTTTAAGTTTATCTATTCATGGGGCTGAAAAGCG...TAAGAAGCCAATGAGGCTGGACAAGGAGACACTGCCAGACCTGGAGGAGAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549155.6
CDS-3UTR TCA 90 bp TCATTCTCCTCCAGGTCTGGCAGTGTCTCCTTGTCCAGCCTCATTGGCTTCTTAGAAGAACAGCAAAAATaGAGCCAGTCGAGAAGAAAA +
Preference number: 4 (lower is better)
Translates to: SFSSRSGSVSLSSLIGFLEEQQK*SQSRRK
Trigger: TTTTCTTCTCGACTGGCTTCATTTTTGCTGTTCTTC...TAAGAAGCCAATGAGGCTGGACAAGGAGACACTGCCAGACCTGGAGGAGAATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000549155.6
CDS-3UTR GCA 90 bp GGACCATATGATGACATTCTAGGAATGTGTGTCCATGTGTCTGAATACCCTTTTGGGATCCTTCCTCAGTaGCTTGGTGTCTTCGGCAGA +
Preference number: 4 (lower is better)
Translates to: GPYDDILGMCVHVSEYPFGILPQ*LGVFGR
Trigger: TCTGCCGAAGACACCAAGGCACTGAGGAAGGATCCC...AAAAGGGTATTCAGACACATGGACACACATTCCTAGAATGTCATCATATGGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392977.8
ENST00000392979.7
CDS-3UTR GCA 90 bp GAGAATGTAACTGCCCATAATGTGCATGCTTGCTTGGTCAAGAATGGTCTATGGCCCACTCAGACTCTGTaGGAGGCTGTTCTAAATTCG +
Preference number: 4 (lower is better)
Translates to: ENVTAHNVHACLVKNGLWPTQTL*EAVLNS
Trigger: CGAATTTAGAACAGCCTCGCACAGAGTCTGAGTGGG...CCATAGACCATTCTTGACCAAGCAAGCATGCACATTATGGGCAGTTACATTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR GCA 90 bp GGTGACATGGAATTAGGACCATATGATGACATTCTAGGAATGTGTGTCCATGTGTCCCCGAGAACTCACTaGCATCAGATTCAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: GDMELGPYDDILGMCVHVSPRTH*HQIQAQ
Trigger: CTGAGCCTGAATCTGATGGCAGTGAGTTCTCGGGGA...CACATGGACACACATTCCTAGAATGTCATCATATGGTCCTAATTCCATGTCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000575847.8
CDS-3UTR GCA 90 bp GTGATTTCACAGCAGTGTGACTCCAACGCCAGTCCTCTACTGGATGCTGCCCCTAGATATGAAATGAGGTaGTTTATACAAAACACGAGG +
Preference number: 4 (lower is better)
Translates to: VISQQCDSNASPLLDAAPRYEMR*FIQNTR
Trigger: CCTCGTGTTTTGTATAAAGCACCTCATTTCATATCT...AGGGGCAGCATCCAGTAGAGGACTGGCGTTGGAGTCACACTGCTGTGAAATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR GCA 90 bp CTTGAGAATGTAACTGCCCATAATGTGCATGCTTGCTTGGTCAAGAATGGTCTAGGTGGTACACAGGGATaGCTGCATCTTTGGAGACGA +
Preference number: 4 (lower is better)
Translates to: LENVTAHNVHACLVKNGLGGTQG*LHLWRR
Trigger: TCGTCTCCAAAGATGCAGGCATCCCTGTGTACCACC...TAGACCATTCTTGACCAAGCAAGCATGCACATTATGGGCAGTTACATTCTCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644049.1
CDS-3UTR CCA 90 bp GCTTTTGCACAGCCAGAAGAAGTAAACAGAATTCAGGTCCTTGGCCTGGAAAGGACACCTCCTTCTGGGTaGAAGACTTTGGTTTTTCCA +
Preference number: 4 (lower is better)
Translates to: AFAQPEEVNRIQVLGLERTPPSG*KTLVFP
Trigger: TGGAAAAACCAAAGTCTTCCACCCAGAAGGAGGTGT...CCTTTCCAGGCCAAGGACCTGAATTCTGTTTACTTCTTCTGGCTGTGCAAAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392977.8
ENST00000644049.1
CDS-3UTR CCA 90 bp CTTGAGAATGTAACTGCCCATAATGTGCATGCTTGCTTGGTCAAGAATGGTCTAAGGCATCCACTAGGGTaGCACTCTTCTAGTCTCCAC +
Preference number: 4 (lower is better)
Translates to: LENVTAHNVHACLVKNGLRHPLG*HSSSLH
Trigger: GTGGAGACTAGAAGAGTGCCACCCTAGTGGATGCCT...TAGACCATTCTTGACCAAGCAAGCATGCACATTATGGGCAGTTACATTCTCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CCA 90 bp GAATGTGTGTCCATGTGTCTGAATACCCTTTTTAGCCCAGTGTCTGTAAAATTCTGCCCAGCTTCTCCTTaGCCTGCACAAGGTCCATAC +
Preference number: 4 (lower is better)
Translates to: ECVSMCLNTLFSPVSVKFCPASP*PAQGPY
Trigger: GTATGGACCTTGTGCAGGCCAAGGAGAAGCTGGGCA...GAATTTTACAGACACTGGGCTAAAAAGGGTATTCAGACACATGGACACACATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR CCA 90 bp GGTTGCATTTTTAGTCATTCACTTGAGTGTGCTTTTGCACAGCCAGAAGAAGTATGCCCAGCTTCTCCTTaGCCTGCACAAGGTCCATAC +
Preference number: 4 (lower is better)
Translates to: GCIFSHSLECAFAQPEEVCPASP*PAQGPY
Trigger: GTATGGACCTTGTGCAGGCCAAGGAGAAGCTGGGCA...TACTTCTTCTGGCTGTGCAAAAGCACACTCAAGTGAATGACTAAAAATGCAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR CCA 90 bp ACTGCCCATAATGTGCATGCTTGCTTGGTCAAGAATGGTCTATGGATAGATAGCCACGGCCACTCGTTGTaGTGTGCTTTTCCATTCTTC +
Preference number: 4 (lower is better)
Translates to: TAHNVHACLVKNGLWIDSHGHSL*CAFPFF
Trigger: GAAGAATGGAAAAGCACACCACAACGAGTGGCCGTG...GCTATCTATCCATAGACCATTCTTGACCAAGCAAGCATGCACATTATGGGCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR TCA 90 bp CTTGAGAATGTAACTGCCCATAATGTGCATGCTTGCTTGGTCAAGAATGGTCTAGCCACACTTCGCCGTTaGTGGATTTGCAAACGCTTT +
Preference number: 4 (lower is better)
Translates to: LENVTAHNVHACLVKNGLATLRR*WICKRF
Trigger: AAAGCGTTTGCAAATCCATCAACGGCGAAGTGTGGC...TAGACCATTCTTGACCAAGCAAGCATGCACATTATGGGCAGTTACATTCTCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR TCA 90 bp GGTTGCATTTTTAGTCATTCACTTGAGTGTGCTTTTGCACAGCCAGAAGAAGTATATCGATCCTGCTCATaGACTTGTAACGGCGGGGCA +
Preference number: 4 (lower is better)
Translates to: GCIFSHSLECAFAQPEEVYRSCS*TCNGGA
Trigger: TGCCCCGCCGTTACAAGTTCATGAGCAGGATCGATA...TACTTCTTCTGGCTGTGCAAAAGCACACTCAAGTGAATGACTAAAAATGCAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR TCA 90 bp GGACCATATGATGACATTCTAGGAATGTGTGTCCATGTGTCTGAATACCCTTTTTTACTGACTTGGCTGTaGTCCAGAGTGGTGACGCCA +
Preference number: 4 (lower is better)
Translates to: GPYDDILGMCVHVSEYPFLLTWL*SRVVTP
Trigger: TGGCGTCACCACTCTGGATCACAGCCAAGTCAGTAA...AAAAGGGTATTCAGACACATGGACACACATTCCTAGAATGTCATCATATGGTCC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR TCA 90 bp TGCAACATGCACTGTGGTTGCATTTTTAGTCATTCACTTGAGTGTGCTTTTGCATTACTGACTTGGCTGTaGTCCAGAGTGGTGACGCCA +
Preference number: 4 (lower is better)
Translates to: CNMHCGCIFSHSLECAFALLTWL*SRVVTP
Trigger: TGGCGTCACCACTCTGGATCACAGCCAAGTCAGTAA...TGCAAAAGCACACTCAAGTGAATGACTAAAAATGCAACCACAGTGCATGTTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR TCA 90 bp GCTTTTGCACAGCCAGAAGAAGTAAACAGAATTCAGGTCCTTGGCCTGGAAAGGTGTCTGTGTTGTTGGTaGCATGGAATTAGGACCATA +
Preference number: 4 (lower is better)
Translates to: AFAQPEEVNRIQVLGLERCLCCW*HGIRTI
Trigger: TATGGTCCTAATTCCATGTCACCAACAACACAGACA...CCTTTCCAGGCCAAGGACCTGAATTCTGTTTACTTCTTCTGGCTGTGCAAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000575847.8
CDS-3UTR GCA 90 bp GCTTTTGCACAGCCAGAAGAAGTAAACAGAATTCAGGTCCTTGGCCTGGAAAGGTTTTTATTGACCTTCTaGCTGGTGGGAGTGAGGAAT +
Preference number: 4 (lower is better)
Translates to: AFAQPEEVNRIQVLGLERFLLTF*LVGVRN
Trigger: ATTCCTCACTCCCACCAGGCAGAAGGTCAATAAAAA...CCTTTCCAGGCCAAGGACCTGAATTCTGTTTACTTCTTCTGGCTGTGCAAAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR GCA 90 bp TGCAACATGCACTGTGGTTGCATTTTTAGTCATTCACTTGAGTGTGCTTTTGCACCCCGGCTTCCAATCTaGTGGCATCATCTGAAGTAC +
Preference number: 4 (lower is better)
Translates to: CNMHCGCIFSHSLECAFAPRLPI*WHHLKY
Trigger: GTACTTCAGATGATGCCAGCAGATTGGAAGCCGGGG...TGCAAAAGCACACTCAAGTGAATGACTAAAAATGCAACCACAGTGCATGTTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR GCA 90 bp GGTGACATGGAATTAGGACCATATGATGACATTCTAGGAATGTGTGTCCATGTGCCCACTCAGACTCTGTaGGAGGCTGTTCTAAATTCG +
Preference number: 4 (lower is better)
Translates to: GDMELGPYDDILGMCVHVPTQTL*EAVLNS
Trigger: CGAATTTAGAACAGCCTCGCACAGAGTCTGAGTGGG...CACATGGACACACATTCCTAGAATGTCATCATATGGTCCTAATTCCATGTCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392977.8
ENST00000392979.7
CDS-3UTR GCA 90 bp TGCAACATGCACTGTGGTTGCATTTTTAGTCATTCACTTGAGTGTGCTTTTGCACCAACCATGCACTTTTaGCCAGCTTCTCCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: CNMHCGCIFSHSLECAFAPTMHF*PASPWP
Trigger: AGGCCAAGGAGAAGCTGGGCAAAAGTGCATGGTTGG...TGCAAAAGCACACTCAAGTGAATGACTAAAAATGCAACCACAGTGCATGTTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR GCA 90 bp GGACCATATGATGACATTCTAGGAATGTGTGTCCATGTGTCTGAATACCCTTTTCCAACCATGCACTTTTaGCCAGCTTCTCCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: GPYDDILGMCVHVSEYPFPTMHF*PASPWP
Trigger: AGGCCAAGGAGAAGCTGGGCAAAAGTGCATGGTTGG...AAAAGGGTATTCAGACACATGGACACACATTCCTAGAATGTCATCATATGGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR GCA 90 bp ACTGCCCATAATGTGCATGCTTGCTTGGTCAAGAATGGTCTATGGATAGATAGCTCACATAGCCAACCATaGACTTTTGCCCAGCTTCTC +
Preference number: 4 (lower is better)
Translates to: TAHNVHACLVKNGLWIDSSHSQP*TFAQLL
Trigger: GAGAAGCTGGGCAAAAGTGCATGGTTGGCTATGTGA...GCTATCTATCCATAGACCATTCTTGACCAAGCAAGCATGCACATTATGGGCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR GCA 90 bp GGTTGCATTTTTAGTCATTCACTTGAGTGTGCTTTTGCACAGCCAGAAGAAGTATCCCCGAGAACTCACTaGCATCAGATTCAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: GCIFSHSLECAFAQPEEVSPRTH*HQIQAQ
Trigger: CTGAGCCTGAATCTGATGGCAGTGAGTTCTCGGGGA...TACTTCTTCTGGCTGTGCAAAAGCACACTCAAGTGAATGACTAAAAATGCAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR GCA 90 bp GGACCATATGATGACATTCTAGGAATGTGTGTCCATGTGTCTGAATACCCTTTTTCCCCGAGAACTCACTaGCATCAGATTCAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: GPYDDILGMCVHVSEYPFSPRTH*HQIQAQ
Trigger: CTGAGCCTGAATCTGATGGCAGTGAGTTCTCGGGGA...AAAAGGGTATTCAGACACATGGACACACATTCCTAGAATGTCATCATATGGTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR GCA 90 bp GAGAATGTAACTGCCCATAATGTGCATGCTTGCTTGGTCAAGAATGGTCTATGGGTAGCTGCCCGTCGTTaGAGAGGAAAGGTTATAACT +
Preference number: 4 (lower is better)
Translates to: ENVTAHNVHACLVKNGLWVAARR*RGKVIT
Trigger: AGTTATAACCTTTCCTCTGCAACGACGGGCAGCTAC...CCATAGACCATTCTTGACCAAGCAAGCATGCACATTATGGGCAGTTACATTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644049.1
CDS-3UTR GCA 90 bp AAGGTAGCAAACAGGCTGAAAAACAGGCCCAGTATACAAGTTCCCCTTGATTTTTCAGGGTTTCCTGGCTaGTACTGCTGTAAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: KVANRLKNRPSIQVPLDFSGFPG*YCCKKA
Trigger: TGCCTTCTTACAGCAGTAGCAGCCAGGAAACCCTGA...AAAATCAAGGGGAACTTGTATACTGGGCCTGTTTTTCAGCCTGTTTGCTACCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000644049.1
CDS-3UTR CCA 90 bp GAAGAACGTTTCTTTGTTGTGTATGATGAAGTGATGGATCCTTTGCTGGCTGAAATTCTCCTCCAGGTCTaGCAGTGTCTCCTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: EERFFVVYDEVMDPLLAEILLQV*QCLLVQ
Trigger: CTGGACAAGGAGACACTGCCAGACCTGGAGGAGAAT...TTCAGCCAGCAAAGGATCCATCACTTCATCATACACAACAAAGAAACGTTCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549155.6
CDS-3UTR CCA 90 bp GGTTGCATTTTTAGTCATTCACTTGAGTGTGCTTTTGCACAGCCAGAAGAAGTATCCAATGAAGGCAGCTaGGAAGAGCATGCCGGTGTA +
Preference number: 4 (lower is better)
Translates to: GCIFSHSLECAFAQPEEVSNEGS*EEHAGV
Trigger: TACACCGGCATGCTCTTCCCAGCTGCCTTCATTGGA...TACTTCTTCTGGCTGTGCAAAAGCACACTCAAGTGAATGACTAAAAATGCAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CCA 90 bp GAGAATGTAACTGCCCATAATGTGCATGCTTGCTTGGTCAAGAATGGTCTATGGTCCTTTCGTTCCTTCTaGAGACGTTCCAGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: ENVTAHNVHACLVKNGLWSFRSF*RRSSSA
Trigger: AGCAGAACTGGAACGTCTCCAGAAGGAACGAAAGGA...CCATAGACCATTCTTGACCAAGCAAGCATGCACATTATGGGCAGTTACATTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR CCA 90 bp GGTGACATGGAATTAGGACCATATGATGACATTCTAGGAATGTGTGTCCATGTGCACGGCCACTCGTTGTaGTGTGCTTTTCCATTCTTC +
Preference number: 4 (lower is better)
Translates to: GDMELGPYDDILGMCVHVHGHSL*CAFPFF
Trigger: GAAGAATGGAAAAGCACACCACAACGAGTGGCCGTG...CACATGGACACACATTCCTAGAATGTCATCATATGGTCCTAATTCCATGTCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000575847.8
CDS-3UTR CCA 90 bp CTTGAGAATGTAACTGCCCATAATGTGCATGCTTGCTTGGTCAAGAATGGTCTACACGGCCACTCGTTGTaGTGTGCTTTTCCATTCTTC +
Preference number: 4 (lower is better)
Translates to: LENVTAHNVHACLVKNGLHGHSL*CAFPFF
Trigger: GAAGAATGGAAAAGCACACCACAACGAGTGGCCGTG...TAGACCATTCTTGACCAAGCAAGCATGCACATTATGGGCAGTTACATTCTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR CCA 90 bp CCAGAAGAAGTAAACAGAATTCAGGTCCTTGGCCTGGAAAGGGACTATTTTATGCACGGCCACTCGTTGTaGTGTGCTTTTCCATTCTTC +
Preference number: 4 (lower is better)
Translates to: PEEVNRIQVLGLERDYFMHGHSL*CAFPFF
Trigger: GAAGAATGGAAAAGCACACCACAACGAGTGGCCGTG...CATAAAATAGTCCCTTTCCAGGCCAAGGACCTGAATTCTGTTTACTTCTTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR TCA 90 bp GGTTGCATTTTTAGTCATTCACTTGAGTGTGCTTTTGCACAGCCAGAAGAAGTAGCCACACTTCGCCGTTaGTGGATTTGCAAACGCTTT +
Preference number: 4 (lower is better)
Translates to: GCIFSHSLECAFAQPEEVATLRR*WICKRF
Trigger: AAAGCGTTTGCAAATCCATCAACGGCGAAGTGTGGC...TACTTCTTCTGGCTGTGCAAAAGCACACTCAAGTGAATGACTAAAAATGCAACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR TCA 90 bp GAAGAACGTTTCTTTGTTGTGTATGATGAAGTGATGGATCCTTTGCTGGCTGAAGCCACACTTCGCCGTTaGTGGATTTGCAAACGCTTT +
Preference number: 4 (lower is better)
Translates to: EERFFVVYDEVMDPLLAEATLRR*WICKRF
Trigger: AAAGCGTTTGCAAATCCATCAACGGCGAAGTGTGGC...TTCAGCCAGCAAAGGATCCATCACTTCATCATACACAACAAAGAAACGTTCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549155.6
CDS-3UTR TCA 90 bp AAGGTAGCAAACAGGCTGAAAAACAGGCCCAGTATACAAGTTCCCCTTGATTTTGTCAGGTTTCCAGGGTaGAGAAGAGAATCGTCATCT +
Preference number: 4 (lower is better)
Translates to: KVANRLKNRPSIQVPLDFVRFPG*RRESSS
Trigger: AGATGACGATTCTCTTCTTCACCCTGGAAACCTGAC...AAAATCAAGGGGAACTTGTATACTGGGCCTGTTTTTCAGCCTGTTTGCTACCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR TCA 90 bp CTTGAGAATGTAACTGCCCATAATGTGCATGCTTGCTTGGTCAAGAATGGTCTAGTCAGGTTTCCAGGGTaGAGAAGAGAATCGTCATCT +
Preference number: 4 (lower is better)
Translates to: LENVTAHNVHACLVKNGLVRFPG*RRESSS
Trigger: AGATGACGATTCTCTTCTTCACCCTGGAAACCTGAC...TAGACCATTCTTGACCAAGCAAGCATGCACATTATGGGCAGTTACATTCTCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR TCA 90 bp CTTGAGAATGTAACTGCCCATAATGTGCATGCTTGCTTGGTCAAGAATGGTCTAAGACAAACAATCCAATaGAGGCAGCTGGGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: LENVTAHNVHACLVKNGLRQTIQ*RQLGRA
Trigger: TGCTCTTCCCAGCTGCCTTCATTGGATTGTTTGTCT...TAGACCATTCTTGACCAAGCAAGCATGCACATTATGGGCAGTTACATTCTCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR TCA 90 bp GAATGTGTGTCCATGTGTCTGAATACCCTTTTTAGCCCAGTGTCTGTAAAATTCGGCAGACTTCTTTACTaGCTTGGCTGTGATCCAGAG +
Preference number: 4 (lower is better)
Translates to: ECVSMCLNTLFSPVSVKFGRLLY*LGCDPE
Trigger: CTCTGGATCACAGCCAAGTCAGTAAAGAAGTCTGCC...GAATTTTACAGACACTGGGCTAAAAAGGGTATTCAGACACATGGACACACATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR TCA 90 bp ACTGCCCATAATGTGCATGCTTGCTTGGTCAAGAATGGTCTATGGATAGATAGCCCTGTGGTTGCAACCTaGGAGTTATTCCTGATTAAC +
Preference number: 4 (lower is better)
Translates to: TAHNVHACLVKNGLWIDSPVVAT*ELFLIN
Trigger: GTTAATCAGGAATAACTCTCAGGTTGCAACCACAGG...GCTATCTATCCATAGACCATTCTTGACCAAGCAAGCATGCACATTATGGGCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR TCA 90 bp CCAGAAGAAGTAAACAGAATTCAGGTCCTTGGCCTGGAAAGGGACTATTTTATGGAAACATTTTCAGGGTaGAGCTGTTCTCCCACTCAG +
Preference number: 4 (lower is better)
Translates to: PEEVNRIQVLGLERDYFMETFSG*SCSPTQ
Trigger: CTGAGTGGGAGAACAGCTTCACCCTGAAAATGTTTC...CATAAAATAGTCCCTTTCCAGGCCAAGGACCTGAATTCTGTTTACTTCTTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR TCA 90 bp GAGAATGTAACTGCCCATAATGTGCATGCTTGCTTGGTCAAGAATGGTCTATGGGGTAGCCAAGTTCCATaGAATTATTCCAGGTCTGCT +
Preference number: 4 (lower is better)
Translates to: ENVTAHNVHACLVKNGLWGSQVP*NYSRSA
Trigger: AGCAGACCTGGAATAATTTCATGGAACTTGGCTACC...CCATAGACCATTCTTGACCAAGCAAGCATGCACATTATGGGCAGTTACATTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR TCA 90 bp CTTGAGAATGTAACTGCCCATAATGTGCATGCTTGCTTGGTCAAGAATGGTCTAGTGTGTCCATGTGTCTaGATACCCTTTTTAGCCCAG +
Preference number: 4 (lower is better)
Translates to: LENVTAHNVHACLVKNGLVCPCV*IPFLAQ
Trigger: CTGGGCTAAAAAGGGTATTCAGACACATGGACACAC...TAGACCATTCTTGACCAAGCAAGCATGCACATTATGGGCAGTTACATTCTCAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR TCA 90 bp AAGGTAGCAAACAGGCTGAAAAACAGGCCCAGTATACAAGTTCCCCTTGATTTTGTGTGTCCATGTGTCTaGATACCCTTTTTAGCCCAG +
Preference number: 4 (lower is better)
Translates to: KVANRLKNRPSIQVPLDFVCPCV*IPFLAQ
Trigger: CTGGGCTAAAAAGGGTATTCAGACACATGGACACAC...AAAATCAAGGGGAACTTGTATACTGGGCCTGTTTTTCAGCCTGTTTGCTACCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR GCA 90 bp AAGGTAGCAAACAGGCTGAAAAACAGGCCCAGTATACAAGTTCCCCTTGATTTTATGTCGGTGGTTTTCTaGTCCATGGGTTCGAATGGA +
Preference number: 4 (lower is better)
Translates to: KVANRLKNRPSIQVPLDFMSVVF*SMGSNG
Trigger: TCCATTCGAACCCATGGAGCAGAAAACCACCGACAT...AAAATCAAGGGGAACTTGTATACTGGGCCTGTTTTTCAGCCTGTTTGCTACCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR GCA 90 bp GCTTTTGCACAGCCAGAAGAAGTAAACAGAATTCAGGTCCTTGGCCTGGAAAGGGTCATAAGCAATTACTaGTCGCCGTCTTTTCCAAAA +
Preference number: 4 (lower is better)
Translates to: AFAQPEEVNRIQVLGLERVISNY*SPSFPK
Trigger: TTTTGGAAAAGACGGCGAGCAGTAATTGCTTATGAC...CCTTTCCAGGCCAAGGACCTGAATTCTGTTTACTTCTTCTGGCTGTGCAAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR GCA 90 bp GGACCATATGATGACATTCTAGGAATGTGTGTCCATGTGTCTGAATACCCTTTTCCCACTCAGACTCTGTaGGAGGCTGTTCTAAATTCG +
Preference number: 4 (lower is better)
Translates to: GPYDDILGMCVHVSEYPFPTQTL*EAVLNS
Trigger: CGAATTTAGAACAGCCTCGCACAGAGTCTGAGTGGG...AAAAGGGTATTCAGACACATGGACACACATTCCTAGAATGTCATCATATGGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR GCA 90 bp GGTGACATGGAATTAGGACCATATGATGACATTCTAGGAATGTGTGTCCATGTGTCACATAGCCAACCATaGACTTTTGCCCAGCTTCTC +
Preference number: 4 (lower is better)
Translates to: GDMELGPYDDILGMCVHVSHSQP*TFAQLL
Trigger: GAGAAGCTGGGCAAAAGTGCATGGTTGGCTATGTGA...CACATGGACACACATTCCTAGAATGTCATCATATGGTCCTAATTCCATGTCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000575847.8
CDS-3UTR GCA 90 bp CCAGAAGAAGTAAACAGAATTCAGGTCCTTGGCCTGGAAAGGGACTATTTTATGAATTGTGCGCTGGACTaGAACGTGATTTCACAGCAG +
Preference number: 4 (lower is better)
Translates to: PEEVNRIQVLGLERDYFMNCALD*NVISQQ
Trigger: CTGCTGTGAAATCACGTTGCAGTCCAGCGCACAATT...CATAAAATAGTCCCTTTCCAGGCCAAGGACCTGAATTCTGTTTACTTCTTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR GCA 90 bp GCTTTTGCACAGCCAGAAGAAGTAAACAGAATTCAGGTCCTTGGCCTGGAAAGGCATAATGTGCATGCTTaGTTGGTCAAGAATGGTCTA +
Preference number: 4 (lower is better)
Translates to: AFAQPEEVNRIQVLGLERHNVHA*LVKNGL
Trigger: TAGACCATTCTTGACCAAGCAAGCATGCACATTATG...CCTTTCCAGGCCAAGGACCTGAATTCTGTTTACTTCTTCTGGCTGTGCAAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR GCA 90 bp GAATGTGTGTCCATGTGTCTGAATACCCTTTTTAGCCCAGTGTCTGTAAAATTCCACAACTGTAGTAGCTaGCCGTCGTTGCAGAGGAAA +
Preference number: 4 (lower is better)
Translates to: ECVSMCLNTLFSPVSVKFHNCSS*PSLQRK
Trigger: TTTCCTCTGCAACGACGGGCAGCTACTACAGTTGTG...GAATTTTACAGACACTGGGCTAAAAAGGGTATTCAGACACATGGACACACATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644049.1
CDS-3UTR GCA 90 bp GGTTGCATTTTTAGTCATTCACTTGAGTGTGCTTTTGCACAGCCAGAAGAAGTAGTACACAGGGATGCCTaGATCTTTGGAGACGAAGAG +
Preference number: 4 (lower is better)
Translates to: GCIFSHSLECAFAQPEEVVHRDA*IFGDEE
Trigger: CTCTTCGTCTCCAAAGATGCAGGCATCCCTGTGTAC...TACTTCTTCTGGCTGTGCAAAAGCACACTCAAGTGAATGACTAAAAATGCAACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644049.1
CDS-3UTR GCA 90 bp GAAGAACGTTTCTTTGTTGTGTATGATGAAGTGATGGATCCTTTGCTGGCTGAATTTCCTGGCTGCTACTaGTGTAAGAAGGCACTGGAG +
Preference number: 4 (lower is better)
Translates to: EERFFVVYDEVMDPLLAEFPGCY*CKKALE
Trigger: CTCCAGTGCCTTCTTACAGCAGTAGCAGCCAGGAAA...TTCAGCCAGCAAAGGATCCATCACTTCATCATACACAACAAAGAAACGTTCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549155.6
CDS-3UTR GCA 90 bp TGCAACATGCACTGTGGTTGCATTTTTAGTCATTCACTTGAGTGTGCTTTTGCATTTCCTGGCTGCTACTaGTGTAAGAAGGCACTGGAG +
Preference number: 4 (lower is better)
Translates to: CNMHCGCIFSHSLECAFAFPGCY*CKKALE
Trigger: CTCCAGTGCCTTCTTACAGCAGTAGCAGCCAGGAAA...TGCAAAAGCACACTCAAGTGAATGACTAAAAATGCAACCACAGTGCATGTTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644049.1
CDS-3UTR CCA 90 bp CTTGAGAATGTAACTGCCCATAATGTGCATGCTTGCTTGGTCAAGAATGGTCTATCCAAGGACTTCCCATaGGGCATGCAACTTCACAAA +
Preference number: 4 (lower is better)
Translates to: LENVTAHNVHACLVKNGLSKDFP*GMQLHK
Trigger: TTTGTGAAGTTGCATGCCCCATGGGAAGTCCTTGGA...TAGACCATTCTTGACCAAGCAAGCATGCACATTATGGGCAGTTACATTCTCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CCA 90 bp GGTGACATGGAATTAGGACCATATGATGACATTCTAGGAATGTGTGTCCATGTGTCCAAGGACTTCCCATaGGGCATGCAACTTCACAAA +
Preference number: 4 (lower is better)
Translates to: GDMELGPYDDILGMCVHVSKDFP*GMQLHK
Trigger: TTTGTGAAGTTGCATGCCCCATGGGAAGTCCTTGGA...CACATGGACACACATTCCTAGAATGTCATCATATGGTCCTAATTCCATGTCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392977.8
ENST00000392979.7
CDS-3UTR CCA 90 bp ACTGCCCATAATGTGCATGCTTGCTTGGTCAAGAATGGTCTATGGATAGATAGCAAAGGTGGGTTACCTTaGCATATACACAGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: TAHNVHACLVKNGLWIDSKGGLP*HIHSCL
Trigger: CAGACAGCTGTGTATATGCCAAGGTAACCCACCTTT...GCTATCTATCCATAGACCATTCTTGACCAAGCAAGCATGCACATTATGGGCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CCA 90 bp GAATGTGTGTCCATGTGTCTGAATACCCTTTTTAGCCCAGTGTCTGTAAAATTCCCTCAAGTAGGCACCTaGGTGTCCTGTAAATCTTCC +
Preference number: 4 (lower is better)
Translates to: ECVSMCLNTLFSPVSVKFPQVGT*VSCKSS
Trigger: GGAAGATTTACAGGACACCCAGGTGCCTACTTGAGG...GAATTTTACAGACACTGGGCTAAAAAGGGTATTCAGACACATGGACACACATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CCA 90 bp GGTGACATGGAATTAGGACCATATGATGACATTCTAGGAATGTGTGTCCATGTGTCCTTTCGTTCCTTCTaGAGACGTTCCAGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: GDMELGPYDDILGMCVHVSFRSF*RRSSSA
Trigger: AGCAGAACTGGAACGTCTCCAGAAGGAACGAAAGGA...CACATGGACACACATTCCTAGAATGTCATCATATGGTCCTAATTCCATGTCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000575847.8
CDS-3UTR CCA 90 bp GCTTTTGCACAGCCAGAAGAAGTAAACAGAATTCAGGTCCTTGGCCTGGAAAGGGTCAAGAATGGTCTATaGATAGATAGCAATTGTGCG +
Preference number: 4 (lower is better)
Translates to: AFAQPEEVNRIQVLGLERVKNGL*IDSNCA
Trigger: CGCACAATTGCTATCTATCCATAGACCATTCTTGAC...CCTTTCCAGGCCAAGGACCTGAATTCTGTTTACTTCTTCTGGCTGTGCAAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR CCA 90 bp CTTGAGAATGTAACTGCCCATAATGTGCATGCTTGCTTGGTCAAGAATGGTCTATCCTTGGCCACTGGGTaGAAGACTTTGGTTTTTCCA +
Preference number: 4 (lower is better)
Translates to: LENVTAHNVHACLVKNGLSLATG*KTLVFP
Trigger: TGGAAAAACCAAAGTCTTCCACCCAGTGGCCAAGGA...TAGACCATTCTTGACCAAGCAAGCATGCACATTATGGGCAGTTACATTCTCAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392979.7
CDS-3UTR CCA 90 bp GGTTGCATTTTTAGTCATTCACTTGAGTGTGCTTTTGCACAGCCAGAAGAAGTAGGATGCCTGCATCTTTaGAGACGAAGAGAGGCAGAT +
Preference number: 4 (lower is better)
Translates to: GCIFSHSLECAFAQPEEVGCLHL*RRREAD
Trigger: ATCTGCCTCTCTTCGTCTCCAAAGATGCAGGCATCC...TACTTCTTCTGGCTGTGCAAAAGCACACTCAAGTGAATGACTAAAAATGCAACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644049.1
CDS-3UTR TCA 90 bp GCTTTTGCACAGCCAGAAGAAGTAAACAGAATTCAGGTCCTTGGCCTGGAAAGGTGCATTAAGAATCTCTaGAAAGTCCACATCACTCTT +
Preference number: 4 (lower is better)
Translates to: AFAQPEEVNRIQVLGLERCIKNL*KVHITL
Trigger: AAGAGTGATGTGGACTTTTCAGAGATTCTTAATGCA...CCTTTCCAGGCCAAGGACCTGAATTCTGTTTACTTCTTCTGGCTGTGCAAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392977.8
ENST00000644049.1
CDS-3UTR TCA 90 bp GAATGTGTGTCCATGTGTCTGAATACCCTTTTTAGCCCAGTGTCTGTAAAATTCGTCAGGTTTCCAGGGTaGAGAAGAGAATCGTCATCT +
Preference number: 4 (lower is better)
Translates to: ECVSMCLNTLFSPVSVKFVRFPG*RRESSS
Trigger: AGATGACGATTCTCTTCTTCACCCTGGAAACCTGAC...GAATTTTACAGACACTGGGCTAAAAAGGGTATTCAGACACATGGACACACATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR TCA 90 bp TCTTGTGGCATTGTTGAAGAACGTTTCTTTGTTGTGTATGATGAAGTGATGGATTATCGATCCTGCTCATaGACTTGTAACGGCGGGGCA +
Preference number: 4 (lower is better)
Translates to: SCGIVEERFFVVYDEVMDYRSCS*TCNGGA
Trigger: TGCCCCGCCGTTACAAGTTCATGAGCAGGATCGATA...ATCCATCACTTCATCATACACAACAAAGAAACGTTCTTCAACAATGCCACAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549155.6
CDS-3UTR TCA 90 bp GGTTGCATTTTTAGTCATTCACTTGAGTGTGCTTTTGCACAGCCAGAAGAAGTAAGACAAACAATCCAATaGAGGCAGCTGGGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: GCIFSHSLECAFAQPEEVRQTIQ*RQLGRA
Trigger: TGCTCTTCCCAGCTGCCTTCATTGGATTGTTTGTCT...TACTTCTTCTGGCTGTGCAAAAGCACACTCAAGTGAATGACTAAAAATGCAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR TCA 90 bp CTTGAGAATGTAACTGCCCATAATGTGCATGCTTGCTTGGTCAAGAATGGTCTAATATACACAGCTGTCTaGCAGCCTCATGAATGGACA +
Preference number: 4 (lower is better)
Translates to: LENVTAHNVHACLVKNGLIYTAV*QPHEWT
Trigger: TGTCCATTCATGAGGCTGTCAGACAGCTGTGTATAT...TAGACCATTCTTGACCAAGCAAGCATGCACATTATGGGCAGTTACATTCTCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR TCA 90 bp AAGGTAGCAAACAGGCTGAAAAACAGGCCCAGTATACAAGTTCCCCTTGATTTTATATACACAGCTGTCTaGCAGCCTCATGAATGGACA +
Preference number: 4 (lower is better)
Translates to: KVANRLKNRPSIQVPLDFIYTAV*QPHEWT
Trigger: TGTCCATTCATGAGGCTGTCAGACAGCTGTGTATAT...AAAATCAAGGGGAACTTGTATACTGGGCCTGTTTTTCAGCCTGTTTGCTACCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR TCA 90 bp GGTGACATGGAATTAGGACCATATGATGACATTCTAGGAATGTGTGTCCATGTGCCTGTGGTTGCAACCTaGGAGTTATTCCTGATTAAC +
Preference number: 4 (lower is better)
Translates to: GDMELGPYDDILGMCVHVPVVAT*ELFLIN
Trigger: GTTAATCAGGAATAACTCTCAGGTTGCAACCACAGG...CACATGGACACACATTCCTAGAATGTCATCATATGGTCCTAATTCCATGTCACC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392977.8
ENST00000392979.7
CDS-3UTR TCA 90 bp AAGGTAGCAAACAGGCTGAAAAACAGGCCCAGTATACAAGTTCCCCTTGATTTTGGTAGCCAAGTTCCATaGAATTATTCCAGGTCTGCT +
Preference number: 4 (lower is better)
Translates to: KVANRLKNRPSIQVPLDFGSQVP*NYSRSA
Trigger: AGCAGACCTGGAATAATTTCATGGAACTTGGCTACC...AAAATCAAGGGGAACTTGTATACTGGGCCTGTTTTTCAGCCTGTTTGCTACCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR TCA 90 bp GAGAATGTAACTGCCCATAATGTGCATGCTTGCTTGGTCAAGAATGGTCTATGGGTCTCCTCCACTGTGTaGCAAATTTGTAAGCATCAA +
Preference number: 4 (lower is better)
Translates to: ENVTAHNVHACLVKNGLWVSSTV*QICKHQ
Trigger: TTGATGCTTACAAATTTGTCACACAGTGGAGGAGAC...CCATAGACCATTCTTGACCAAGCAAGCATGCACATTATGGGCAGTTACATTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR TCA 90 bp GAGAATGTAACTGCCCATAATGTGCATGCTTGCTTGGTCAAGAATGGTCTATGGTGTCTGTGTTGTTGGTaGCATGGAATTAGGACCATA +
Preference number: 4 (lower is better)
Translates to: ENVTAHNVHACLVKNGLWCLCCW*HGIRTI
Trigger: TATGGTCCTAATTCCATGTCACCAACAACACAGACA...CCATAGACCATTCTTGACCAAGCAAGCATGCACATTATGGGCAGTTACATTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000575847.8
CDS-3UTR GCA 90 bp TGCAACATGCACTGTGGTTGCATTTTTAGTCATTCACTTGAGTGTGCTTTTGCAATGTCGGTGGTTTTCTaGTCCATGGGTTCGAATGGA +
Preference number: 4 (lower is better)
Translates to: CNMHCGCIFSHSLECAFAMSVVF*SMGSNG
Trigger: TCCATTCGAACCCATGGAGCAGAAAACCACCGACAT...TGCAAAAGCACACTCAAGTGAATGACTAAAAATGCAACCACAGTGCATGTTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR GCA 90 bp ACTGCCCATAATGTGCATGCTTGCTTGGTCAAGAATGGTCTATGGATAGATAGCAACTGTTGCCCAGACTaGCATGAAAACAGCAAAGAA +
Preference number: 4 (lower is better)
Translates to: TAHNVHACLVKNGLWIDSNCCPD*HENSKE
Trigger: TTCTTTGCTGTTTTCATGGCAGTCTGGGCAACAGTT...GCTATCTATCCATAGACCATTCTTGACCAAGCAAGCATGCACATTATGGGCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR GCA 90 bp GAATGTGTGTCCATGTGTCTGAATACCCTTTTTAGCCCAGTGTCTGTAAAATTCCTCCAGGAAAACTGTTaGCCAGACTGCCATGAAAAC +
Preference number: 4 (lower is better)
Translates to: ECVSMCLNTLFSPVSVKFLQENC*PDCHEN
Trigger: GTTTTCATGGCAGTCTGGGCAACAGTTTTCCTGGAG...GAATTTTACAGACACTGGGCTAAAAAGGGTATTCAGACACATGGACACACATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR GCA 90 bp GAATGTGTGTCCATGTGTCTGAATACCCTTTTTAGCCCAGTGTCTGTAAAATTCAGCAGTCCCTGTGGTTaGAACCTGAGAGTTATTCCT +
Preference number: 4 (lower is better)
Translates to: ECVSMCLNTLFSPVSVKFSSPCG*NLRVIP
Trigger: AGGAATAACTCTCAGGTTGCAACCACAGGGACTGCT...GAATTTTACAGACACTGGGCTAAAAAGGGTATTCAGACACATGGACACACATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR GCA 90 bp GAGAATGTAACTGCCCATAATGTGCATGCTTGCTTGGTCAAGAATGGTCTATGGTCTTCCGAGGAAGAATaGGATGTAAAATGTGGAGCT +
Preference number: 4 (lower is better)
Translates to: ENVTAHNVHACLVKNGLWSSEEE*DVKCGA
Trigger: AGCTCCACATTTTACATCGCATTCTTCCTCGGAAGA...CCATAGACCATTCTTGACCAAGCAAGCATGCACATTATGGGCAGTTACATTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR GCA 90 bp CTTGAGAATGTAACTGCCCATAATGTGCATGCTTGCTTGGTCAAGAATGGTCTAAGCTTCTCCTTGGCCTaGACAAGGTCCATACTTATA +
Preference number: 4 (lower is better)
Translates to: LENVTAHNVHACLVKNGLSFSLA*TRSILI
Trigger: TATAAGTATGGACCTTGTGCAGGCCAAGGAGAAGCT...TAGACCATTCTTGACCAAGCAAGCATGCACATTATGGGCAGTTACATTCTCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR GCA 90 bp CCAGAAGAAGTAAACAGAATTCAGGTCCTTGGCCTGGAAAGGGACTATTTTATGAGCTTCTCCTTGGCCTaGACAAGGTCCATACTTATA +
Preference number: 4 (lower is better)
Translates to: PEEVNRIQVLGLERDYFMSFSLA*TRSILI
Trigger: TATAAGTATGGACCTTGTGCAGGCCAAGGAGAAGCT...CATAAAATAGTCCCTTTCCAGGCCAAGGACCTGAATTCTGTTTACTTCTTCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR GCA 90 bp AAGGTAGCAAACAGGCTGAAAAACAGGCCCAGTATACAAGTTCCCCTTGATTTTAGCTTCTCCTTGGCCTaGACAAGGTCCATACTTATA +
Preference number: 4 (lower is better)
Translates to: KVANRLKNRPSIQVPLDFSFSLA*TRSILI
Trigger: TATAAGTATGGACCTTGTGCAGGCCAAGGAGAAGCT...AAAATCAAGGGGAACTTGTATACTGGGCCTGTTTTTCAGCCTGTTTGCTACCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR GCA 90 bp GAATGTGTGTCCATGTGTCTGAATACCCTTTTTAGCCCAGTGTCTGTAAAATTCTCACATAGCCAACCATaGACTTTTGCCCAGCTTCTC +
Preference number: 4 (lower is better)
Translates to: ECVSMCLNTLFSPVSVKFSHSQP*TFAQLL
Trigger: GAGAAGCTGGGCAAAAGTGCATGGTTGGCTATGTGA...GAATTTTACAGACACTGGGCTAAAAAGGGTATTCAGACACATGGACACACATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR GCA 90 bp CTTGAGAATGTAACTGCCCATAATGTGCATGCTTGCTTGGTCAAGAATGGTCTAGAGACGTTCCAGTTCTaGTTCATACATCATCTCCTG +
Preference number: 4 (lower is better)
Translates to: LENVTAHNVHACLVKNGLETFQF*FIHHLL
Trigger: CAGGAGATGATGTATGAAGCAGAACTGGAACGTCTC...TAGACCATTCTTGACCAAGCAAGCATGCACATTATGGGCAGTTACATTCTCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR GCA 90 bp TTGTTTATCGATCCTGCTCATGAACTTGTAACGGCGGGGCAGGTAATAGATTTTATGGGAGGGTTGGTCTaGCTTGTACGTATGGATTTT +
Preference number: 4 (lower is better)
Translates to: LFIDPAHELVTAGQVIDFMGGLV*LVRMDF
Trigger: AAAATCCATACGTACAAGGCAGACCAACCCTCCCAT...AAAATCTATTACCTGCCCCGCCGTTACAAGTTCATGAGCAGGATCGATAAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549155.6
CDS-3UTR CCA 90 bp GAATGTGTGTCCATGTGTCTGAATACCCTTTTTAGCCCAGTGTCTGTAAAATTCTCCAAGGACTTCCCATaGGGCATGCAACTTCACAAA +
Preference number: 4 (lower is better)
Translates to: ECVSMCLNTLFSPVSVKFSKDFP*GMQLHK
Trigger: TTTGTGAAGTTGCATGCCCCATGGGAAGTCCTTGGA...GAATTTTACAGACACTGGGCTAAAAAGGGTATTCAGACACATGGACACACATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CCA 90 bp CCAGAAGAAGTAAACAGAATTCAGGTCCTTGGCCTGGAAAGGGACTATTTTATGAAAGGTGGGTTACCTTaGCATATACACAGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: PEEVNRIQVLGLERDYFMKGGLP*HIHSCL
Trigger: CAGACAGCTGTGTATATGCCAAGGTAACCCACCTTT...CATAAAATAGTCCCTTTCCAGGCCAAGGACCTGAATTCTGTTTACTTCTTCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CCA 90 bp GCTTTTGCACAGCCAGAAGAAGTAAACAGAATTCAGGTCCTTGGCCTGGAAAGGTGCTTGATAAGGTTCTaGCTTTCCAGAAATTGGATT +
Preference number: 4 (lower is better)
Translates to: AFAQPEEVNRIQVLGLERCLIRF*LSRNWI
Trigger: AATCCAATTTCTGGAAAGCCAGAACCTTATCAAGCA...CCTTTCCAGGCCAAGGACCTGAATTCTGTTTACTTCTTCTGGCTGTGCAAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CCA 90 bp GAATGTGTGTCCATGTGTCTGAATACCCTTTTTAGCCCAGTGTCTGTAAAATTCACACAGCAGTCCCTGTaGTTGCAACCTGAGAGTTAT +
Preference number: 4 (lower is better)
Translates to: ECVSMCLNTLFSPVSVKFTQQSL*LQPESY
Trigger: ATAACTCTCAGGTTGCAACCACAGGGACTGCTGTGT...GAATTTTACAGACACTGGGCTAAAAAGGGTATTCAGACACATGGACACACATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CCA 90 bp TGCAACATGCACTGTGGTTGCATTTTTAGTCATTCACTTGAGTGTGCTTTTGCAACACAGCAGTCCCTGTaGTTGCAACCTGAGAGTTAT +
Preference number: 4 (lower is better)
Translates to: CNMHCGCIFSHSLECAFATQQSL*LQPESY
Trigger: ATAACTCTCAGGTTGCAACCACAGGGACTGCTGTGT...TGCAAAAGCACACTCAAGTGAATGACTAAAAATGCAACCACAGTGCATGTTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CCA 90 bp GGTTGCATTTTTAGTCATTCACTTGAGTGTGCTTTTGCACAGCCAGAAGAAGTATCCTTTCGTTCCTTCTaGAGACGTTCCAGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: GCIFSHSLECAFAQPEEVSFRSF*RRSSSA
Trigger: AGCAGAACTGGAACGTCTCCAGAAGGAACGAAAGGA...TACTTCTTCTGGCTGTGCAAAAGCACACTCAAGTGAATGACTAAAAATGCAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR CCA 90 bp CCAGAAGAAGTAAACAGAATTCAGGTCCTTGGCCTGGAAAGGGACTATTTTATGCAGAATTCAGGTCCTTaGCCTGGAAAGGGACTATTT +
Preference number: 4 (lower is better)
Translates to: PEEVNRIQVLGLERDYFMQNSGP*PGKGLF
Trigger: AAATAGTCCCTTTCCAGGCCAAGGACCTGAATTCTG...CATAAAATAGTCCCTTTCCAGGCCAAGGACCTGAATTCTGTTTACTTCTTCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR CCA 90 bp ACTGCCCATAATGTGCATGCTTGCTTGGTCAAGAATGGTCTATGGATAGATAGCATGTGCATGCTTGCTTaGTCAAGAATGGTCTATGGA +
Preference number: 4 (lower is better)
Translates to: TAHNVHACLVKNGLWIDSMCMLA*SRMVYG
Trigger: TCCATAGACCATTCTTGACCAAGCAAGCATGCACAT...GCTATCTATCCATAGACCATTCTTGACCAAGCAAGCATGCACATTATGGGCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR CCA 90 bp ACTGCCCATAATGTGCATGCTTGCTTGGTCAAGAATGGTCTATGGATAGATAGCTCTGCCTTGTACGTATaGATTTTTCCAGTGGGTAAG +
Preference number: 4 (lower is better)
Translates to: TAHNVHACLVKNGLWIDSSALYV*IFPVGK
Trigger: CTTACCCACTGGAAAAATCCATACGTACAAGGCAGA...GCTATCTATCCATAGACCATTCTTGACCAAGCAAGCATGCACATTATGGGCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644049.1
CDS-3UTR TCA 90 bp AAGGTAGCAAACAGGCTGAAAAACAGGCCCAGTATACAAGTTCCCCTTGATTTTCTTTGCAAGGACTGCTaGCAGCTTCTAATTCATCAA +
Preference number: 4 (lower is better)
Translates to: KVANRLKNRPSIQVPLDFLCKDC*QLLIHQ
Trigger: TTGATGAATTAGAAGCTGTCAGCAGTCCTTGCAAAG...AAAATCAAGGGGAACTTGTATACTGGGCCTGTTTTTCAGCCTGTTTGCTACCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR TCA 90 bp TGCAACATGCACTGTGGTTGCATTTTTAGTCATTCACTTGAGTGTGCTTTTGCAATATACACAGCTGTCTaGCAGCCTCATGAATGGACA +
Preference number: 4 (lower is better)
Translates to: CNMHCGCIFSHSLECAFAIYTAV*QPHEWT
Trigger: TGTCCATTCATGAGGCTGTCAGACAGCTGTGTATAT...TGCAAAAGCACACTCAAGTGAATGACTAAAAATGCAACCACAGTGCATGTTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR TCA 90 bp GAATGTGTGTCCATGTGTCTGAATACCCTTTTTAGCCCAGTGTCTGTAAAATTCGGTAGCCAAGTTCCATaGAATTATTCCAGGTCTGCT +
Preference number: 4 (lower is better)
Translates to: ECVSMCLNTLFSPVSVKFGSQVP*NYSRSA
Trigger: AGCAGACCTGGAATAATTTCATGGAACTTGGCTACC...GAATTTTACAGACACTGGGCTAAAAAGGGTATTCAGACACATGGACACACATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR TCA 90 bp AAGGTAGCAAACAGGCTGAAAAACAGGCCCAGTATACAAGTTCCCCTTGATTTTGTCTCCTCCACTGTGTaGCAAATTTGTAAGCATCAA +
Preference number: 4 (lower is better)
Translates to: KVANRLKNRPSIQVPLDFVSSTV*QICKHQ
Trigger: TTGATGCTTACAAATTTGTCACACAGTGGAGGAGAC...AAAATCAAGGGGAACTTGTATACTGGGCCTGTTTTTCAGCCTGTTTGCTACCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR TCA 90 bp GAGAATGTAACTGCCCATAATGTGCATGCTTGCTTGGTCAAGAATGGTCTATGGGTCTGGGATCAGATATaGAATGAGGTGCTTTATACA +
Preference number: 4 (lower is better)
Translates to: ENVTAHNVHACLVKNGLWVWDQI*NEVLYT
Trigger: TGTATAAAGCACCTCATTTCATATCTGATCCCAGAC...CCATAGACCATTCTTGACCAAGCAAGCATGCACATTATGGGCAGTTACATTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR TCA 90 bp AAGGTAGCAAACAGGCTGAAAAACAGGCCCAGTATACAAGTTCCCCTTGATTTTTGTCTGTGTTGTTGGTaGCATGGAATTAGGACCATA +
Preference number: 4 (lower is better)
Translates to: KVANRLKNRPSIQVPLDFCLCCW*HGIRTI
Trigger: TATGGTCCTAATTCCATGTCACCAACAACACAGACA...AAAATCAAGGGGAACTTGTATACTGGGCCTGTTTTTCAGCCTGTTTGCTACCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000575847.8
CDS-3UTR TCA 90 bp GGTGACATGGAATTAGGACCATATGATGACATTCTAGGAATGTGTGTCCATGTGTGTCTGTGTTGTTGGTaGCATGGAATTAGGACCATA +
Preference number: 4 (lower is better)
Translates to: GDMELGPYDDILGMCVHVCLCCW*HGIRTI
Trigger: TATGGTCCTAATTCCATGTCACCAACAACACAGACA...CACATGGACACACATTCCTAGAATGTCATCATATGGTCCTAATTCCATGTCACC
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000575847.8
CDS-3UTR TCA 90 bp GGTGACATGGAATTAGGACCATATGATGACATTCTAGGAATGTGTGTCCATGTGCATCAAAAAGAATATTaGCATCCTTGGCCACTGGGT +
Preference number: 4 (lower is better)
Translates to: GDMELGPYDDILGMCVHVHQKEY*HPWPLG
Trigger: ACCCAGTGGCCAAGGATGTCAATATTCTTTTTGATG...CACATGGACACACATTCCTAGAATGTCATCATATGGTCCTAATTCCATGTCACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392979.7
CDS-3UTR TCA 90 bp TCTTGTGGCATTGTTGAAGAACGTTTCTTTGTTGTGTATGATGAAGTGATGGATAAACCTGTTGTGTCTTaGCTCAGGGTTTCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: SCGIVEERFFVVYDEVMDKPVVS*LRVSWL
Trigger: CAGCCAGGAAACCCTGAGTCAAGACACAACAGGTTT...ATCCATCACTTCATCATACACAACAAAGAAACGTTCTTCAACAATGCCACAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549155.6
CDS-3UTR TCA 90 bp ACTGCCCATAATGTGCATGCTTGCTTGGTCAAGAATGGTCTATGGATAGATAGCCGCTTTTCAGCCCCATaGATAGATAAACTTAAACCT +
Preference number: 4 (lower is better)
Translates to: TAHNVHACLVKNGLWIDSRFSAP*IDKLKP
Trigger: AGGTTTAAGTTTATCTATTCATGGGGCTGAAAAGCG...GCTATCTATCCATAGACCATTCTTGACCAAGCAAGCATGCACATTATGGGCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644049.1
CDS-3UTR GCA 90 bp TTCTTTGTTGTGTATGATGAAGTGATGGATCCTTTGCTGGCTGAAAGGGGCAGTACCATCTCCGAAACCTaGTTATTTGTTTATCGATCC +
Preference number: 4 (lower is better)
Translates to: FFVVYDEVMDPLLAERGSTISET*LFVYRS
Trigger: GGATCGATAAACAAATAAGCAGGTTTCGGAGATGGT...ACTGCCCCTTTCAGCCAGCAAAGGATCCATCACTTCATCATACACAACAAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549155.6
CDS-3UTR GCA 90 bp GAATGTGTGTCCATGTGTCTGAATACCCTTTTTAGCCCAGTGTCTGTAAAATTCAGCTTCTCCTTGGCCTaGACAAGGTCCATACTTATA +
Preference number: 4 (lower is better)
Translates to: ECVSMCLNTLFSPVSVKFSFSLA*TRSILI
Trigger: TATAAGTATGGACCTTGTGCAGGCCAAGGAGAAGCT...GAATTTTACAGACACTGGGCTAAAAAGGGTATTCAGACACATGGACACACATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR GCA 90 bp GGACCATATGATGACATTCTAGGAATGTGTGTCCATGTGTCTGAATACCCTTTTGAGACGTTCCAGTTCTaGTTCATACATCATCTCCTG +
Preference number: 4 (lower is better)
Translates to: GPYDDILGMCVHVSEYPFETFQF*FIHHLL
Trigger: CAGGAGATGATGTATGAAGCAGAACTGGAACGTCTC...AAAAGGGTATTCAGACACATGGACACACATTCCTAGAATGTCATCATATGGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR GCA 90 bp GAGAATGTAACTGCCCATAATGTGCATGCTTGCTTGGTCAAGAATGGTCTATGGCATAATGTGCATGCTTaGTTGGTCAAGAATGGTCTA +
Preference number: 4 (lower is better)
Translates to: ENVTAHNVHACLVKNGLWHNVHA*LVKNGL
Trigger: TAGACCATTCTTGACCAAGCAAGCATGCACATTATG...CCATAGACCATTCTTGACCAAGCAAGCATGCACATTATGGGCAGTTACATTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR GCA 90 bp TTGTTTATCGATCCTGCTCATGAACTTGTAACGGCGGGGCAGGTAATAGATTTTGGTTATAACTTCCGCTaGTCACATCTTTGTCGTATG +
Preference number: 4 (lower is better)
Translates to: LFIDPAHELVTAGQVIDFGYNFR*SHLCRM
Trigger: CATACGACAAAGATGTGAGCAGCGGAAGTTATAACC...AAAATCTATTACCTGCCCCGCCGTTACAAGTTCATGAGCAGGATCGATAAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549155.6
CDS-3UTR GCA 90 bp ATGCACGATTCTACTTCTTGTGGCATTGTTGAAGAACGTTTCTTTGTTGTGTATCACAACTGTAGTAGCTaGCCGTCGTTGCAGAGGAAA +
Preference number: 4 (lower is better)
Translates to: MHDSTSCGIVEERFFVVYHNCSS*PSLQRK
Trigger: TTTCCTCTGCAACGACGGGCAGCTACTACAGTTGTG...ATACACAACAAAGAAACGTTCTTCAACAATGCCACAAGAAGTAGAATCGTGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549155.6
CDS-3UTR CCA 90 bp GGTTGCATTTTTAGTCATTCACTTGAGTGTGCTTTTGCACAGCCAGAAGAAGTAACACCTCCTTCTGGGTaGAAGACTTTGGTTTTTCCA +
Preference number: 4 (lower is better)
Translates to: GCIFSHSLECAFAQPEEVTPPSG*KTLVFP
Trigger: TGGAAAAACCAAAGTCTTCCACCCAGAAGGAGGTGT...TACTTCTTCTGGCTGTGCAAAAGCACACTCAAGTGAATGACTAAAAATGCAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000392977.8
ENST00000644049.1
CDS-3UTR CCA 90 bp ACTGCCCATAATGTGCATGCTTGCTTGGTCAAGAATGGTCTATGGATAGATAGCAAATTCCTATGTCTTTaGCCCTTGAAGCTAAAGGTC +
Preference number: 4 (lower is better)
Translates to: TAHNVHACLVKNGLWIDSKFLCL*PLKLKV
Trigger: GACCTTTAGCTTCAAGGGCCAAAGACATAGGAATTT...GCTATCTATCCATAGACCATTCTTGACCAAGCAAGCATGCACATTATGGGCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CCA 90 bp GGTGACATGGAATTAGGACCATATGATGACATTCTAGGAATGTGTGTCCATGTGGAAATACAGACAAGCTaGCATTCACATAGCCAACCA +
Preference number: 4 (lower is better)
Translates to: GDMELGPYDDILGMCVHVEIQTS*HSHSQP
Trigger: TGGTTGGCTATGTGAATGCCAGCTTGTCTGTATTTC...CACATGGACACACATTCCTAGAATGTCATCATATGGTCCTAATTCCATGTCACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000575847.8
CDS-3UTR CCA 90 bp CCAGAAGAAGTAAACAGAATTCAGGTCCTTGGCCTGGAAAGGGACTATTTTATGGAAATACAGACAAGCTaGCATTCACATAGCCAACCA +
Preference number: 4 (lower is better)
Translates to: PEEVNRIQVLGLERDYFMEIQTS*HSHSQP
Trigger: TGGTTGGCTATGTGAATGCCAGCTTGTCTGTATTTC...CATAAAATAGTCCCTTTCCAGGCCAAGGACCTGAATTCTGTTTACTTCTTCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR CCA 90 bp GAATGTGTGTCCATGTGTCTGAATACCCTTTTTAGCCCAGTGTCTGTAAAATTCTTCAGGTCCTTGGCCTaGAAAGGGACTATTTTATGG +
Preference number: 4 (lower is better)
Translates to: ECVSMCLNTLFSPVSVKFFRSLA*KGTILW
Trigger: CCATAAAATAGTCCCTTTCCAGGCCAAGGACCTGAA...GAATTTTACAGACACTGGGCTAAAAAGGGTATTCAGACACATGGACACACATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR CCA 90 bp GAATGTGTGTCCATGTGTCTGAATACCCTTTTTAGCCCAGTGTCTGTAAAATTCCAGAATTCAGGTCCTTaGCCTGGAAAGGGACTATTT +
Preference number: 4 (lower is better)
Translates to: ECVSMCLNTLFSPVSVKFQNSGP*PGKGLF
Trigger: AAATAGTCCCTTTCCAGGCCAAGGACCTGAATTCTG...GAATTTTACAGACACTGGGCTAAAAAGGGTATTCAGACACATGGACACACATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR CCA 90 bp CTTGAGAATGTAACTGCCCATAATGTGCATGCTTGCTTGGTCAAGAATGGTCTAATGTGCATGCTTGCTTaGTCAAGAATGGTCTATGGA +
Preference number: 4 (lower is better)
Translates to: LENVTAHNVHACLVKNGLMCMLA*SRMVYG
Trigger: TCCATAGACCATTCTTGACCAAGCAAGCATGCACAT...TAGACCATTCTTGACCAAGCAAGCATGCACATTATGGGCAGTTACATTCTCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR TCA 90 bp TCTTGTGGCATTGTTGAAGAACGTTTCTTTGTTGTGTATGATGAAGTGATGGATGTCAGGTTTCCAGGGTaGAGAAGAGAATCGTCATCT +
Preference number: 4 (lower is better)
Translates to: SCGIVEERFFVVYDEVMDVRFPG*RRESSS
Trigger: AGATGACGATTCTCTTCTTCACCCTGGAAACCTGAC...ATCCATCACTTCATCATACACAACAAAGAAACGTTCTTCAACAATGCCACAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549155.6
CDS-3UTR TCA 90 bp TGCAACATGCACTGTGGTTGCATTTTTAGTCATTCACTTGAGTGTGCTTTTGCATGTCTGACAGCCTCATaGATGGACAGTATTTATCAC +
Preference number: 4 (lower is better)
Translates to: CNMHCGCIFSHSLECAFACLTAS*MDSIYH
Trigger: GTGATAAATACTGTCCATTCATGAGGCTGTCAGACA...TGCAAAAGCACACTCAAGTGAATGACTAAAAATGCAACCACAGTGCATGTTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR TCA 90 bp GGACCATATGATGACATTCTAGGAATGTGTGTCCATGTGTCTGAATACCCTTTTTGTCTGACAGCCTCATaGATGGACAGTATTTATCAC +
Preference number: 4 (lower is better)
Translates to: GPYDDILGMCVHVSEYPFCLTAS*MDSIYH
Trigger: GTGATAAATACTGTCCATTCATGAGGCTGTCAGACA...AAAAGGGTATTCAGACACATGGACACACATTCCTAGAATGTCATCATATGGTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR TCA 90 bp CCAGAAGAAGTAAACAGAATTCAGGTCCTTGGCCTGGAAAGGGACTATTTTATGGTCTGGGATCAGATATaGAATGAGGTGCTTTATACA +
Preference number: 4 (lower is better)
Translates to: PEEVNRIQVLGLERDYFMVWDQI*NEVLYT
Trigger: TGTATAAAGCACCTCATTTCATATCTGATCCCAGAC...CATAAAATAGTCCCTTTCCAGGCCAAGGACCTGAATTCTGTTTACTTCTTCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR GCA 90 bp GGTGACATGGAATTAGGACCATATGATGACATTCTAGGAATGTGTGTCCATGTGGACTCTTTCTCCATTTaGAATCCTTCTGCTCTAATG +
Preference number: 4 (lower is better)
Translates to: GDMELGPYDDILGMCVHVDSFSI*NPSALM
Trigger: CATTAGAGCAGAAGGATTGCAAATGGAGAAAGAGTC...CACATGGACACACATTCCTAGAATGTCATCATATGGTCCTAATTCCATGTCACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392977.8
ENST00000392979.7
CDS-3UTR GCA 90 bp CCAGAAGAAGTAAACAGAATTCAGGTCCTTGGCCTGGAAAGGGACTATTTTATGACCATCTCCGAAACCTaGTTATTTGTTTATCGATCC +
Preference number: 4 (lower is better)
Translates to: PEEVNRIQVLGLERDYFMTISET*LFVYRS
Trigger: GGATCGATAAACAAATAAGCAGGTTTCGGAGATGGT...CATAAAATAGTCCCTTTCCAGGCCAAGGACCTGAATTCTGTTTACTTCTTCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR GCA 90 bp TGCAACATGCACTGTGGTTGCATTTTTAGTCATTCACTTGAGTGTGCTTTTGCAAACTGTTGCCCAGACTaGCATGAAAACAGCAAAGAA +
Preference number: 4 (lower is better)
Translates to: CNMHCGCIFSHSLECAFANCCPD*HENSKE
Trigger: TTCTTTGCTGTTTTCATGGCAGTCTGGGCAACAGTT...TGCAAAAGCACACTCAAGTGAATGACTAAAAATGCAACCACAGTGCATGTTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR GCA 90 bp GGTTGCATTTTTAGTCATTCACTTGAGTGTGCTTTTGCACAGCCAGAAGAAGTAAACTGTTGCCCAGACTaGCATGAAAACAGCAAAGAA +
Preference number: 4 (lower is better)
Translates to: GCIFSHSLECAFAQPEEVNCCPD*HENSKE
Trigger: TTCTTTGCTGTTTTCATGGCAGTCTGGGCAACAGTT...TACTTCTTCTGGCTGTGCAAAAGCACACTCAAGTGAATGACTAAAAATGCAACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR GCA 90 bp GGTGACATGGAATTAGGACCATATGATGACATTCTAGGAATGTGTGTCCATGTGGTCATAAGCAATTACTaGTCGCCGTCTTTTCCAAAA +
Preference number: 4 (lower is better)
Translates to: GDMELGPYDDILGMCVHVVISNY*SPSFPK
Trigger: TTTTGGAAAAGACGGCGAGCAGTAATTGCTTATGAC...CACATGGACACACATTCCTAGAATGTCATCATATGGTCCTAATTCCATGTCACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392977.8
ENST00000392979.7
CDS-3UTR GCA 90 bp GGACCATATGATGACATTCTAGGAATGTGTGTCCATGTGTCTGAATACCCTTTTTCTTCCGAGGAAGAATaGGATGTAAAATGTGGAGCT +
Preference number: 4 (lower is better)
Translates to: GPYDDILGMCVHVSEYPFSSEEE*DVKCGA
Trigger: AGCTCCACATTTTACATCGCATTCTTCCTCGGAAGA...AAAAGGGTATTCAGACACATGGACACACATTCCTAGAATGTCATCATATGGTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR GCA 90 bp CTTGAGAATGTAACTGCCCATAATGTGCATGCTTGCTTGGTCAAGAATGGTCTACATAATGTGCATGCTTaGTTGGTCAAGAATGGTCTA +
Preference number: 4 (lower is better)
Translates to: LENVTAHNVHACLVKNGLHNVHA*LVKNGL
Trigger: TAGACCATTCTTGACCAAGCAAGCATGCACATTATG...TAGACCATTCTTGACCAAGCAAGCATGCACATTATGGGCAGTTACATTCTCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR CCA 90 bp CCAGAAGAAGTAAACAGAATTCAGGTCCTTGGCCTGGAAAGGGACTATTTTATGTGGTTTTCTGCTCCATaGGTTCGAATGGAGTTTTTA +
Preference number: 4 (lower is better)
Translates to: PEEVNRIQVLGLERDYFMWFSAP*VRMEFL
Trigger: TAAAAACTCCATTCGAACCCATGGAGCAGAAAACCA...CATAAAATAGTCCCTTTCCAGGCCAAGGACCTGAATTCTGTTTACTTCTTCTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CCA 90 bp CTTGAGAATGTAACTGCCCATAATGTGCATGCTTGCTTGGTCAAGAATGGTCTATGGTTTTCTGCTCCATaGGTTCGAATGGAGTTTTTA +
Preference number: 4 (lower is better)
Translates to: LENVTAHNVHACLVKNGLWFSAP*VRMEFL
Trigger: TAAAAACTCCATTCGAACCCATGGAGCAGAAAACCA...TAGACCATTCTTGACCAAGCAAGCATGCACATTATGGGCAGTTACATTCTCAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CCA 90 bp GGTTGCATTTTTAGTCATTCACTTGAGTGTGCTTTTGCACAGCCAGAAGAAGTAACAAGATCCAAAGGTTaGTATTTATACCACACGCCC +
Preference number: 4 (lower is better)
Translates to: GCIFSHSLECAFAQPEEVTRSKG*YLYHTP
Trigger: GGGCGTGTGGTATAAATACCAACCTTTGGATCTTGT...TACTTCTTCTGGCTGTGCAAAAGCACACTCAAGTGAATGACTAAAAATGCAACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CCA 90 bp ACTGCCCATAATGTGCATGCTTGCTTGGTCAAGAATGGTCTATGGATAGATAGCATGATATCTGTAGCTTaGCAGACTTCTTTACTGACT +
Preference number: 4 (lower is better)
Translates to: TAHNVHACLVKNGLWIDSMISVA*QTSLLT
Trigger: AGTCAGTAAAGAAGTCTGCCAAGCTACAGATATCAT...GCTATCTATCCATAGACCATTCTTGACCAAGCAAGCATGCACATTATGGGCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CCA 90 bp GAGAATGTAACTGCCCATAATGTGCATGCTTGCTTGGTCAAGAATGGTCTATGGATGATATCTGTAGCTTaGCAGACTTCTTTACTGACT +
Preference number: 4 (lower is better)
Translates to: ENVTAHNVHACLVKNGLWMISVA*QTSLLT
Trigger: AGTCAGTAAAGAAGTCTGCCAAGCTACAGATATCAT...CCATAGACCATTCTTGACCAAGCAAGCATGCACATTATGGGCAGTTACATTCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CCA 90 bp CTTGAGAATGTAACTGCCCATAATGTGCATGCTTGCTTGGTCAAGAATGGTCTATGGCTTTCCAGAAATTaGATTCATCCGCTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: LENVTAHNVHACLVKNGLWLSRN*IHPLFL
Trigger: AAGAAAGAGCGGATGAATCCAATTTCTGGAAAGCCA...TAGACCATTCTTGACCAAGCAAGCATGCACATTATGGGCAGTTACATTCTCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CCA 90 bp ACTGCCCATAATGTGCATGCTTGCTTGGTCAAGAATGGTCTATGGATAGATAGCTGCTTGATAAGGTTCTaGCTTTCCAGAAATTGGATT +
Preference number: 4 (lower is better)
Translates to: TAHNVHACLVKNGLWIDSCLIRF*LSRNWI
Trigger: AATCCAATTTCTGGAAAGCCAGAACCTTATCAAGCA...GCTATCTATCCATAGACCATTCTTGACCAAGCAAGCATGCACATTATGGGCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CCA 90 bp GGTGACATGGAATTAGGACCATATGATGACATTCTAGGAATGTGTGTCCATGTGAAATTCCTATGTCTTTaGCCCTTGAAGCTAAAGGTC +
Preference number: 4 (lower is better)
Translates to: GDMELGPYDDILGMCVHVKFLCL*PLKLKV
Trigger: GACCTTTAGCTTCAAGGGCCAAAGACATAGGAATTT...CACATGGACACACATTCCTAGAATGTCATCATATGGTCCTAATTCCATGTCACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392977.8
ENST00000392979.7
CDS-3UTR CCA 90 bp GAATGTGTGTCCATGTGTCTGAATACCCTTTTTAGCCCAGTGTCTGTAAAATTCGAAATACAGACAAGCTaGCATTCACATAGCCAACCA +
Preference number: 4 (lower is better)
Translates to: ECVSMCLNTLFSPVSVKFEIQTS*HSHSQP
Trigger: TGGTTGGCTATGTGAATGCCAGCTTGTCTGTATTTC...GAATTTTACAGACACTGGGCTAAAAAGGGTATTCAGACACATGGACACACATTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR CCA 90 bp CTTGAGAATGTAACTGCCCATAATGTGCATGCTTGCTTGGTCAAGAATGGTCTAGTCAAGAATGGTCTATaGATAGATAGCAATTGTGCG +
Preference number: 4 (lower is better)
Translates to: LENVTAHNVHACLVKNGLVKNGL*IDSNCA
Trigger: CGCACAATTGCTATCTATCCATAGACCATTCTTGAC...TAGACCATTCTTGACCAAGCAAGCATGCACATTATGGGCAGTTACATTCTCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR TCA 90 bp AAGGTAGCAAACAGGCTGAAAAACAGGCCCAGTATACAAGTTCCCCTTGATTTTTGCATTAAGAATCTCTaGAAAGTCCACATCACTCTT +
Preference number: 4 (lower is better)
Translates to: KVANRLKNRPSIQVPLDFCIKNL*KVHITL
Trigger: AAGAGTGATGTGGACTTTTCAGAGATTCTTAATGCA...AAAATCAAGGGGAACTTGTATACTGGGCCTGTTTTTCAGCCTGTTTGCTACCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000392977.8
ENST00000644049.1
CDS-3UTR TCA 90 bp GGTTGCATTTTTAGTCATTCACTTGAGTGTGCTTTTGCACAGCCAGAAGAAGTAGTCTGGGATCAGATATaGAATGAGGTGCTTTATACA +
Preference number: 4 (lower is better)
Translates to: GCIFSHSLECAFAQPEEVVWDQI*NEVLYT
Trigger: TGTATAAAGCACCTCATTTCATATCTGATCCCAGAC...TACTTCTTCTGGCTGTGCAAAAGCACACTCAAGTGAATGACTAAAAATGCAACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR TCA 90 bp GGACCATATGATGACATTCTAGGAATGTGTGTCCATGTGTCTGAATACCCTTTTGTCTGGGATCAGATATaGAATGAGGTGCTTTATACA +
Preference number: 4 (lower is better)
Translates to: GPYDDILGMCVHVSEYPFVWDQI*NEVLYT
Trigger: TGTATAAAGCACCTCATTTCATATCTGATCCCAGAC...AAAAGGGTATTCAGACACATGGACACACATTCCTAGAATGTCATCATATGGTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR GCA 90 bp TGTGGCATTGTTGAAGAACGTTTCTTTGTTGTGTATGATGAAGTGATGGATCCTTTTTTATTGACCTTCTaGCTGGTGGGAGTGAGGAAT +
Preference number: 4 (lower is better)
Translates to: CGIVEERFFVVYDEVMDPFLLTF*LVGVRN
Trigger: ATTCCTCACTCCCACCAGGCAGAAGGTCAATAAAAA...AGGATCCATCACTTCATCATACACAACAAAGAAACGTTCTTCAACAATGCCACA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000549155.6
CDS-3UTR GCA 90 bp TGCAACATGCACTGTGGTTGCATTTTTAGTCATTCACTTGAGTGTGCTTTTGCAGACTCTTTCTCCATTTaGAATCCTTCTGCTCTAATG +
Preference number: 4 (lower is better)
Translates to: CNMHCGCIFSHSLECAFADSFSI*NPSALM
Trigger: CATTAGAGCAGAAGGATTGCAAATGGAGAAAGAGTC...TGCAAAAGCACACTCAAGTGAATGACTAAAAATGCAACCACAGTGCATGTTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CCA 90 bp AATGTGATGCACGATTCTACTTCTTGTGGCATTGTTGAAGAACGTTTCTTTGTTATCCACACCTCCTTCTaGGTGGAAGACTTTGGTTTT +
Preference number: 4 (lower is better)
Translates to: NVMHDSTSCGIVEERFFVIHTSF*VEDFGF
Trigger: AAAACCAAAGTCTTCCACCCAGAAGGAGGTGTGGAT...AACAAAGAAACGTTCTTCAACAATGCCACAAGAAGTAGAATCGTGCATCACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549155.6
CDS-3UTR CCA 90 bp CCAGAAGAAGTAAACAGAATTCAGGTCCTTGGCCTGGAAAGGGACTATTTTATGCTCCATGGGTTCGAATaGAGTTTTTACTTCTATAAC +
Preference number: 4 (lower is better)
Translates to: PEEVNRIQVLGLERDYFMLHGFE*SFYFYN
Trigger: GTTATAGAAGTAAAAACTCCATTCGAACCCATGGAG...CATAAAATAGTCCCTTTCCAGGCCAAGGACCTGAATTCTGTTTACTTCTTCTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CCA 90 bp GGTGACATGGAATTAGGACCATATGATGACATTCTAGGAATGTGTGTCCATGTGCTCCATGGGTTCGAATaGAGTTTTTACTTCTATAAC +
Preference number: 4 (lower is better)
Translates to: GDMELGPYDDILGMCVHVLHGFE*SFYFYN
Trigger: GTTATAGAAGTAAAAACTCCATTCGAACCCATGGAG...CACATGGACACACATTCCTAGAATGTCATCATATGGTCCTAATTCCATGTCACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392977.8
ENST00000392979.7
CDS-3UTR CCA 90 bp GGACCATATGATGACATTCTAGGAATGTGTGTCCATGTGTCTGAATACCCTTTTCCATTGTCAAAAAGGTaGGTTACCTTGGCATATACA +
Preference number: 4 (lower is better)
Translates to: GPYDDILGMCVHVSEYPFPLSKR*VTLAYT
Trigger: TGTATATGCCAAGGTAACCCACCTTTTTGACAATGG...AAAAGGGTATTCAGACACATGGACACACATTCCTAGAATGTCATCATATGGTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CCA 90 bp GAATGTGTGTCCATGTGTCTGAATACCCTTTTTAGCCCAGTGTCTGTAAAATTCTCATCCGCTCTTTCTTaGAATACTTGGCTTCAAACT +
Preference number: 4 (lower is better)
Translates to: ECVSMCLNTLFSPVSVKFSSALS*NTWLQT
Trigger: AGTTTGAAGCCAAGTATTCCAAGAAAGAGCGGATGA...GAATTTTACAGACACTGGGCTAAAAAGGGTATTCAGACACATGGACACACATTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CCA 90 bp GGACCATATGATGACATTCTAGGAATGTGTGTCCATGTGTCTGAATACCCTTTTTCATCCGCTCTTTCTTaGAATACTTGGCTTCAAACT +
Preference number: 4 (lower is better)
Translates to: GPYDDILGMCVHVSEYPFSSALS*NTWLQT
Trigger: AGTTTGAAGCCAAGTATTCCAAGAAAGAGCGGATGA...AAAAGGGTATTCAGACACATGGACACACATTCCTAGAATGTCATCATATGGTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CCA 90 bp TGCAACATGCACTGTGGTTGCATTTTTAGTCATTCACTTGAGTGTGCTTTTGCATGGCTTTCCAGAAATTaGATTCATCCGCTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: CNMHCGCIFSHSLECAFAWLSRN*IHPLFL
Trigger: AAGAAAGAGCGGATGAATCCAATTTCTGGAAAGCCA...TGCAAAAGCACACTCAAGTGAATGACTAAAAATGCAACCACAGTGCATGTTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CCA 90 bp GGACCATATGATGACATTCTAGGAATGTGTGTCCATGTGTCTGAATACCCTTTTGTCAAGAATGGTCTATaGATAGATAGCAATTGTGCG +
Preference number: 4 (lower is better)
Translates to: GPYDDILGMCVHVSEYPFVKNGL*IDSNCA
Trigger: CGCACAATTGCTATCTATCCATAGACCATTCTTGAC...AAAAGGGTATTCAGACACATGGACACACATTCCTAGAATGTCATCATATGGTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR CCA 90 bp GGTTGCATTTTTAGTCATTCACTTGAGTGTGCTTTTGCACAGCCAGAAGAAGTAGTCAAGAATGGTCTATaGATAGATAGCAATTGTGCG +
Preference number: 4 (lower is better)
Translates to: GCIFSHSLECAFAQPEEVVKNGL*IDSNCA
Trigger: CGCACAATTGCTATCTATCCATAGACCATTCTTGAC...TACTTCTTCTGGCTGTGCAAAAGCACACTCAAGTGAATGACTAAAAATGCAACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR CCA 90 bp TGTGGCATTGTTGAAGAACGTTTCTTTGTTGTGTATGATGAAGTGATGGATCCTTCTGCCTTGTACGTATaGATTTTTCCAGTGGGTAAG +
Preference number: 4 (lower is better)
Translates to: CGIVEERFFVVYDEVMDPSALYV*IFPVGK
Trigger: CTTACCCACTGGAAAAATCCATACGTACAAGGCAGA...AGGATCCATCACTTCATCATACACAACAAAGAAACGTTCTTCAACAATGCCACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000549155.6
3UTR CAA 72 bp CTTGAGAATGTAACTGCCCATAATGTGCATGCTTGCTaGGTCAAGAATGGTCTATGGATAGATAGCAATTGT +
Preference number: 4 (lower is better)
Translates to: LENVTAHNVHAC*VKNGLWIDSNC
Trigger: ACAATTGCTATCTATCCATAGACCATTCTTGACCAAGCAAGCATGCACATTATGGGCAGTTACATTCTCAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR TCA 90 bp TCTTGTGGCATTGTTGAAGAACGTTTCTTTGTTGTGTATGATGAAGTGATGGATCTTTGCAAGGACTGCTaGCAGCTTCTAATTCATCAA +
Preference number: 4 (lower is better)
Translates to: SCGIVEERFFVVYDEVMDLCKDC*QLLIHQ
Trigger: TTGATGAATTAGAAGCTGTCAGCAGTCCTTGCAAAG...ATCCATCACTTCATCATACACAACAAAGAAACGTTCTTCAACAATGCCACAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549155.6
CDS-3UTR GCA 90 bp CCAGAAGAAGTAAACAGAATTCAGGTCCTTGGCCTGGAAAGGGACTATTTTATGAGATATGAAATGAGGTaGTTTATACAAAACACGAGG +
Preference number: 4 (lower is better)
Translates to: PEEVNRIQVLGLERDYFMRYEMR*FIQNTR
Trigger: CCTCGTGTTTTGTATAAAGCACCTCATTTCATATCT...CATAAAATAGTCCCTTTCCAGGCCAAGGACCTGAATTCTGTTTACTTCTTCTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR GCA 90 bp AAGGTAGCAAACAGGCTGAAAAACAGGCCCAGTATACAAGTTCCCCTTGATTTTAGATATGAAATGAGGTaGTTTATACAAAACACGAGG +
Preference number: 4 (lower is better)
Translates to: KVANRLKNRPSIQVPLDFRYEMR*FIQNTR
Trigger: CCTCGTGTTTTGTATAAAGCACCTCATTTCATATCT...AAAATCAAGGGGAACTTGTATACTGGGCCTGTTTTTCAGCCTGTTTGCTACCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR GCA 90 bp GGTGACATGGAATTAGGACCATATGATGACATTCTAGGAATGTGTGTCCATGTGAACATGCACTGTGGTTaGATTTTTAGTCATTCACTT +
Preference number: 4 (lower is better)
Translates to: GDMELGPYDDILGMCVHVNMHCG*IFSHSL
Trigger: AAGTGAATGACTAAAAATGCAACCACAGTGCATGTT...CACATGGACACACATTCCTAGAATGTCATCATATGGTCCTAATTCCATGTCACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000575847.8
CDS-3UTR CCA 90 bp GAATGTGTGTCCATGTGTCTGAATACCCTTTTTAGCCCAGTGTCTGTAAAATTCCTCCATGGGTTCGAATaGAGTTTTTACTTCTATAAC +
Preference number: 4 (lower is better)
Translates to: ECVSMCLNTLFSPVSVKFLHGFE*SFYFYN
Trigger: GTTATAGAAGTAAAAACTCCATTCGAACCCATGGAG...GAATTTTACAGACACTGGGCTAAAAAGGGTATTCAGACACATGGACACACATTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR GCA 90 bp GAATGTGTGTCCATGTGTCTGAATACCCTTTTTAGCCCAGTGTCTGTAAAATTCAGATATGAAATGAGGTaGTTTATACAAAACACGAGG +
Preference number: 4 (lower is better)
Translates to: ECVSMCLNTLFSPVSVKFRYEMR*FIQNTR
Trigger: CCTCGTGTTTTGTATAAAGCACCTCATTTCATATCT...GAATTTTACAGACACTGGGCTAAAAAGGGTATTCAGACACATGGACACACATTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR GCA 90 bp TGCAACATGCACTGTGGTTGCATTTTTAGTCATTCACTTGAGTGTGCTTTTGCAAACATGCACTGTGGTTaGATTTTTAGTCATTCACTT +
Preference number: 4 (lower is better)
Translates to: CNMHCGCIFSHSLECAFANMHCG*IFSHSL
Trigger: AAGTGAATGACTAAAAATGCAACCACAGTGCATGTT...TGCAAAAGCACACTCAAGTGAATGACTAAAAATGCAACCACAGTGCATGTTGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR GCA 90 bp GGACCATATGATGACATTCTAGGAATGTGTGTCCATGTGTCTGAATACCCTTTTAACATGCACTGTGGTTaGATTTTTAGTCATTCACTT +
Preference number: 4 (lower is better)
Translates to: GPYDDILGMCVHVSEYPFNMHCG*IFSHSL
Trigger: AAGTGAATGACTAAAAATGCAACCACAGTGCATGTT...AAAAGGGTATTCAGACACATGGACACACATTCCTAGAATGTCATCATATGGTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR CAA 90 bp CCAGTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGCGTGGCCTGGTCAGTCTaGCGGGTGAAGGATCGGTGG +
Preference number: 5 (lower is better)
Translates to: PVLYWMLPLLRPPVSATCVAWSV*RVKDRW
Trigger: CCACCGATCCTTCACCCGCAAGACTGACCAGGCCAC...GCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644049.1
CDS-3UTR CAA 90 bp CCAGTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGCGCCAACCATGCACTTTaGCCCAGCTTCTCCTTGGCC +
Preference number: 5 (lower is better)
Translates to: PVLYWMLPLLRPPVSATCANHAL*PSFSLA
Trigger: GGCCAAGGAGAAGCTGGGCAAAAGTGCATGGTTGGC...GCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR CAA 90 bp ATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGCACTGTGGTTGCATTTGTGACGCTGGGCGGCTaGCCACACTTCGCCGTTGAT +
Preference number: 5 (lower is better)
Translates to: MLPLLRPPVSATCTVVAFVTLGG*PHFAVD
Trigger: ATCAACGGCGAAGTGTGGCAAGCCGCCCAGCGTCAC...AAATGCAACCACAGTGCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CAA 90 bp CAGCAGTGTGACTCCAACGCCAGTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGGTCACGGCCACTCGTaGTGGTGTGCTTTTCCATTC +
Preference number: 5 (lower is better)
Translates to: QQCDSNASPLLDAAPPAAGHGHS*WCAFPF
Trigger: GAATGGAAAAGCACACCACAACGAGTGGCCGTGACC...GGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGGCGTTGGAGTCACACTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR CAA 90 bp AACGCCAGTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACGGTCACGGCCACTCGTaGTGGTGTGCTTTTCCATTC +
Preference number: 5 (lower is better)
Translates to: NASPLLDAAPPAAAGICNGHGHS*WCAFPF
Trigger: GAATGGAAAAGCACACCACAACGAGTGGCCGTGACC...GTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGGCGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS TCA 90 bp CCTCCATTTTTATTGACCTTCTGCCTGGTGGGAGTGAGGAATGCCTaGCCACAGGCAGGCGACGACGTGACGCTGGGCGGCTTGCCACAC +
Preference number: 5 (lower is better)
Translates to: PPFLLTFCLVGVRNA*PQAGDDVTLGGLPH
Trigger: GTGTGGCAAGCCGCCCAGCGTCACGTCGTCGCCTGCCTGTGGTCAGGCATTCCTCACTCCCACCAGGCAGAAGGTCAATAAAAATGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000546991.1
ENST00000549155.6
ENST00000644049.1
CDS GCA 90 bp CTTGCCTCCATTTTTATTGACCTTCTGCCTGGTGGGAGTGAGGAATaGCTGACCACAGGCAGGCGACGACGTGACGCTGGGCGGCTTGCC +
Preference number: 5 (lower is better)
Translates to: LASIFIDLLPGGSEE*LTTGRRRRDAGRLA
Trigger: GGCAAGCCGCCCAGCGTCACGTCGTCGCCTGCCTGTGGTCAGGCATTCCTCACTCCCACCAGGCAGAAGGTCAATAAAAATGGAGGCAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000546991.1
ENST00000549155.6
ENST00000644049.1
CDS CCA 90 bp TCTGGAACAGGACTCTCCGGAGAGCGAGCCGGAGTGAAAGCAGCCTaGTGGATTTCACCACCGTCTCAGAGCATCACGCCCAGGACTGGT +
Preference number: 5 (lower is better)
Translates to: SGTGLSGERAGVKAA*WISPPSQSITPRTG
Trigger: ACCAGTCCTGGGCGTGATGCTCTGAGACGGTGGTGAAATCCACCAGGCTGCTTTCACTCCGGCTCGCTCTCCGGAGAGTCCTGTTCCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551148.1
CDS-3UTR CAA 90 bp CCAGTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGCTCGCCGTTGATGGATTaGCAAACGCTTTTCAGCCCC +
Preference number: 5 (lower is better)
Translates to: PVLYWMLPLLRPPVSATCSPLMD*QTLFSP
Trigger: GGGGCTGAAAAGCGTTTGCAAATCCATCAACGGCGA...GCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CAA 90 bp CCAGTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGCCAGCAGTCCCTGTGGTaGCAACCTGAGAGTTATTCC +
Preference number: 5 (lower is better)
Translates to: PVLYWMLPLLRPPVSATCQQSLW*QPESYS
Trigger: GGAATAACTCTCAGGTTGCAACCACAGGGACTGCTG...GCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS TCA 90 bp ACCCTGAGAAGTCTGGAACAGGACTCTCCGGAGAGCGAGCCGGAGTaGAAGCAGCCTGGTGGATTTCACCACCGTCTCAGAGCATCACGC +
Preference number: 5 (lower is better)
Translates to: TLRSLEQDSPESEPE*KQPGGFHHRLRASR
Trigger: GCGTGATGCTCTGAGACGGTGGTGAAATCCACCAGGCTGCTTTCACTCCGGCTCGCTCTCCGGAGAGTCCTGTTCCAGACTTCTCAGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551148.1
CDS-3UTR CAA 90 bp CAGCAGTGTGACTCCAACGCCAGTCCTCTACTGGATGCTGCCCCTCCTGCGGCCTGCCACACTTCGCCGTaGATGGATTTGCAAACGCTT +
Preference number: 5 (lower is better)
Translates to: QQCDSNASPLLDAAPPAACHTSP*MDLQTL
Trigger: AAGCGTTTGCAAATCCATCAACGGCGAAGTGTGGCA...GGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGGCGTTGGAGTCACACTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CAA 90 bp GTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGCACTATCCAGCTGGTAGCCTaGCAAATCCACACCTCCTTC +
Preference number: 5 (lower is better)
Translates to: VLYWMLPLLRPPVSATCTIQLVA*QIHTSF
Trigger: GAAGGAGGTGTGGATTTGCAAGGCTACCAGCTGGAT...AGTGCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392977.8
ENST00000644049.1
CDS-3UTR CAA 90 bp GATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGCACTGTGGTTGCATTGGTCACGGCCACTCGTaGTGGTGTGCTTTTCCATTC +
Preference number: 5 (lower is better)
Translates to: DAAPPAAAGICNMHCGCIGHGHS*WCAFPF
Trigger: GAATGGAAAAGCACACCACAACGAGTGGCCGTGACC...AATGCAACCACAGTGCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS TCA 90 bp GTGAGGCTGGACAGGACAAAGGTGTGGCCTGGTCAGTCTTGCGGGTaGAGGATCGGTGGTACACAGGGATGCCTGCATCTTTGGAGACGA +
Preference number: 5 (lower is better)
Translates to: VRLDRTKVWPGQSCG*RIGGTQGCLHLWRR
Trigger: TCGTCTCCAAAGATGCAGGCATCCCTGTGTACCACCGATCCTTCACCCGCAAGACTGACCAGGCCACACCTTTGTCCTGTCCAGCCTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549155.6
ENST00000644049.1
CDS-3UTR CAA 90 bp CCAGTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGCGACTTCTTTACTGACTaGGCTGTGATCCAGAGTGGT +
Preference number: 5 (lower is better)
Translates to: PVLYWMLPLLRPPVSATCDFFTD*AVIQSG
Trigger: ACCACTCTGGATCACAGCCAAGTCAGTAAAGAAGTC...GCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS CCA 90 bp CAGGACAAAGGTGTGGCCTGGTCAGTCTTGCGGGTGAAGGATCGGTaGTACACAGGGATGCCTGCATCTTTGGAGACGAAGAGAGGCAGA +
Preference number: 5 (lower is better)
Translates to: QDKGVAWSVLRVKDR*YTGMPASLETKRGR
Trigger: TCTGCCTCTCTTCGTCTCCAAAGATGCAGGCATCCCTGTGTACCACCGATCCTTCACCCGCAAGACTGACCAGGCCACACCTTTGTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549155.6
ENST00000644049.1
CDS CCA 90 bp ACTGGAGTGATAGACAGTGAGGCTGGACAGGACAAAGGTGTGGCCTaGTCAGTCTTGCGGGTGAAGGATCGGTGGTACACAGGGATGCCT +
Preference number: 5 (lower is better)
Translates to: TGVIDSEAGQDKGVA*SVLRVKDRWYTGMP
Trigger: AGGCATCCCTGTGTACCACCGATCCTTCACCCGCAAGACTGACCAGGCCACACCTTTGTCCTGTCCAGCCTCACTGTCTATCACTCCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549155.6
ENST00000644049.1
CDS-3UTR CAA 90 bp GTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGCACTGCCGTATGCAGTTGTTaGTGCTGTAAAAACCCTGAG +
Preference number: 5 (lower is better)
Translates to: VLYWMLPLLRPPVSATCTAVCSC*CCKNPE
Trigger: CTCAGGGTTTTTACAGCACAAACAACTGCATACGGC...AGTGCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392977.8
ENST00000392979.7
CDS-3UTR CAA 90 bp TCCAGGTCTGGCAGTGTCTCCTTGTCCAGCCTCATTGGCTTCTTAGGTAACCATGTGACGCTGGGCGGCTaGCCACACTTCGCCGTTGAT +
Preference number: 5 (lower is better)
Translates to: SRSGSVSLSSLIGFLGNHVTLGG*PHFAVD
Trigger: ATCAACGGCGAAGTGTGGCAAGCCGCCCAGCGTCAC...ATGGTTACCTAAGAAGCCAATGAGGCTGGACAAGGAGACACTGCCAGACCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549155.6
CDS-3UTR CAA 90 bp ATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGCACTGTGGTTGCATTTGAAGTGATGGATCCTTaGCTGGCTGAAAGGGGCAGT +
Preference number: 5 (lower is better)
Translates to: MLPLLRPPVSATCTVVAFEVMDP*LAERGS
Trigger: ACTGCCCCTTTCAGCCAGCAAAGGATCCATCACTTC...AAATGCAACCACAGTGCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CAA 90 bp CTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGCACTGTGGTTGCAAAAGGTGGGTTACCTaGGCATATACACAGCTGTCT +
Preference number: 5 (lower is better)
Translates to: LDAAPPAAAGICNMHCGCKRWVT*AYTQLS
Trigger: AGACAGCTGTGTATATGCCAAGGTAACCCACCTTTT...GCAACCACAGTGCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CAA 90 bp GTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGCACTAAGACAGTGGCTCCATaGTCAAAAAGGTGGGTTACC +
Preference number: 5 (lower is better)
Translates to: VLYWMLPLLRPPVSATCTKTVAP*SKRWVT
Trigger: GGTAACCCACCTTTTTGACAATGGAGCCACTGTCTT...AGTGCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CAA 90 bp GTGATTTCACAGCAGTGTGACTCCAACGCCAGTCCTCTACTGGATGCTGCCCCTGCCAACCATGCACTTTaGCCCAGCTTCTCCTTGGCC +
Preference number: 5 (lower is better)
Translates to: VISQQCDSNASPLLDAAPANHAL*PSFSLA
Trigger: GGCCAAGGAGAAGCTGGGCAAAAGTGCATGGTTGGC...AGGGGCAGCATCCAGTAGAGGACTGGCGTTGGAGTCACACTGCTGTGAAATCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR CAA 90 bp AACGCCAGTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACAATGTGCATGCTTGCTaGGTCAAGAATGGTCTATGG +
Preference number: 5 (lower is better)
Translates to: NASPLLDAAPPAAAGICNNVHAC*VKNGLW
Trigger: CCATAGACCATTCTTGACCAAGCAAGCATGCACATT...GTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGGCGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR CAA 90 bp CTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGCACTGTGGTTGCAATGTGCATGCTTGCTaGGTCAAGAATGGTCTATGG +
Preference number: 5 (lower is better)
Translates to: LDAAPPAAAGICNMHCGCNVHAC*VKNGLW
Trigger: CCATAGACCATTCTTGACCAAGCAAGCATGCACATT...GCAACCACAGTGCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS TCA 90 bp TCCTTCCTCAGTGCCTTGGTGTCTTCGGCAGAAAGAAATCCACTGTaGACCTCCAGGCTCCAGTCGGGAGGAGGCCAGCAAAGTGATGAC +
Preference number: 5 (lower is better)
Translates to: SFLSALVSSAERNPL*TSRLQSGGGQQSDD
Trigger: GTCATCACTTTGCTGGCCTCCTCCCGACTGGAGCCTGGAGGTTCACAGTGGATTTCTTTCTGCCGAAGACACCAAGGCACTGAGGAAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000546991.1
ENST00000551148.1
CDS-3UTR CAA 90 bp CCAGTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGCCCGAAACCTGCTTATTaGTTTATCGATCCTGCTCAT +
Preference number: 5 (lower is better)
Translates to: PVLYWMLPLLRPPVSATCPKPAY*FIDPAH
Trigger: ATGAGCAGGATCGATAAACAAATAAGCAGGTTTCGG...GCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CAA 90 bp AGCAGTCATTCTCCTCCAGGTCTGGCAGTGTCTCCTTGTCCAGCCTCATTGGCTTCTGGCAGTGTCTCCTaGTCCAGCCTCATTGGCTTC +
Preference number: 5 (lower is better)
Translates to: SSHSPPGLAVSPCPASLASGSVS*SSLIGF
Trigger: GAAGCCAATGAGGCTGGACAAGGAGACACTGCCAGA...AGCCAATGAGGCTGGACAAGGAGACACTGCCAGACCTGGAGGAGAATGACTGCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549155.6
CDS-3UTR CAA 90 bp ACGCCAGTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATACAAGATCCAAAGGTaGGTATTTATACCACACGCC +
Preference number: 5 (lower is better)
Translates to: TPVLYWMLPLLRPPVSATYKIQR*VFIPHA
Trigger: GGCGTGTGGTATAAATACCAACCTTTGGATCTTGTA...TGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CAA 90 bp AACGCCAGTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACTTCATCCGCTCTTTCTaGGAATACTTGGCTTCAAAC +
Preference number: 5 (lower is better)
Translates to: NASPLLDAAPPAAAGICNFIRSF*EYLASN
Trigger: GTTTGAAGCCAAGTATTCCAAGAAAGAGCGGATGAA...GTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGGCGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CAA 90 bp CCAGTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGCTTCATCCGCTCTTTCTaGGAATACTTGGCTTCAAAC +
Preference number: 5 (lower is better)
Translates to: PVLYWMLPLLRPPVSATCFIRSF*EYLASN
Trigger: GTTTGAAGCCAAGTATTCCAAGAAAGAGCGGATGAA...GCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CAA 90 bp ATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGCACTGTGGTTGCATTTCTATGTCTTTGGCCCTaGAAGCTAAAGGTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: MLPLLRPPVSATCTVVAFLCLWP*KLKVSS
Trigger: GGAGGAGACCTTTAGCTTCAAGGGCCAAAGACATAG...AAATGCAACCACAGTGCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CAA 90 bp CTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGCACTGTGGTTGCCAAATTCCTATGTCTTaGGCCCTTGAAGCTAAAGGT +
Preference number: 5 (lower is better)
Translates to: LDAAPPAAAGICNMHCGCQIPMS*ALEAKG
Trigger: ACCTTTAGCTTCAAGGGCCAAAGACATAGGAATTTG...GCAACCACAGTGCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CAA 90 bp AACGCCAGTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACCAAATTCCTATGTCTTaGGCCCTTGAAGCTAAAGGT +
Preference number: 5 (lower is better)
Translates to: NASPLLDAAPPAAAGICNQIPMS*ALEAKG
Trigger: ACCTTTAGCTTCAAGGGCCAAAGACATAGGAATTTG...GTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGGCGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CAA 90 bp ATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGCACTGTGGTTGCATTTGATCCCTTAGGTCTTTaGGGAGGTCTGGGATCAGAT +
Preference number: 5 (lower is better)
Translates to: MLPLLRPPVSATCTVVAFDPLGL*GGLGSD
Trigger: ATCTGATCCCAGACCTCCCAAAAGACCTAAGGGATC...AAATGCAACCACAGTGCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR CAA 90 bp GTCTCCTTGTCCAGCCTCATTGGCTTCTTAGGTAACCATCTCCGAAACCTGCTTGTGGCCTGGTCAGTCTaGCGGGTGAAGGATCGGTGG +
Preference number: 5 (lower is better)
Translates to: VSLSSLIGFLGNHLRNLLVAWSV*RVKDRW
Trigger: CCACCGATCCTTCACCCGCAAGACTGACCAGGCCAC...AAGCAGGTTTCGGAGATGGTTACCTAAGAAGCCAATGAGGCTGGACAAGGAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549155.6
CDS-3UTR CAA 90 bp GTGATTTCACAGCAGTGTGACTCCAACGCCAGTCCTCTACTGGATGCTGCCCCTTCCTTCCTCAGTGCCTaGGTGTCTTCGGCAGAAAGA +
Preference number: 5 (lower is better)
Translates to: VISQQCDSNASPLLDAAPSFLSA*VSSAER
Trigger: TCTTTCTGCCGAAGACACCAAGGCACTGAGGAAGGA...AGGGGCAGCATCCAGTAGAGGACTGGCGTTGGAGTCACACTGCTGTGAAATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392977.8
ENST00000392979.7
CDS-3UTR CAA 90 bp CTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGCACTGTGGTTGCTCTGGGTGGAAGACTTaGGTTTTTCCATTAGTGATT +
Preference number: 5 (lower is better)
Translates to: LDAAPPAAAGICNMHCGCSGWKT*VFPLVI
Trigger: AATCACTAATGGAAAAACCAAAGTCTTCCACCCAGA...GCAACCACAGTGCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392977.8
ENST00000644049.1
CDS-3UTR CAA 90 bp GTGATTTCACAGCAGTGTGACTCCAACGCCAGTCCTCTACTGGATGCTGCCCCTGAAGTGATGGATCCTTaGCTGGCTGAAAGGGGCAGT +
Preference number: 5 (lower is better)
Translates to: VISQQCDSNASPLLDAAPEVMDP*LAERGS
Trigger: ACTGCCCCTTTCAGCCAGCAAAGGATCCATCACTTC...AGGGGCAGCATCCAGTAGAGGACTGGCGTTGGAGTCACACTGCTGTGAAATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CAA 90 bp ACGCCAGTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACACTACTTCTTGTGGCATaGTTGAAGAACGTTTCTTTG +
Preference number: 5 (lower is better)
Translates to: TPVLYWMLPLLRPPVSATLLLVA*LKNVSL
Trigger: CAAAGAAACGTTCTTCAACAATGCCACAAGAAGTAG...TGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CAA 90 bp AACGCCAGTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACCTACTTCTTGTGGCATaGTTGAAGAACGTTTCTTTG +
Preference number: 5 (lower is better)
Translates to: NASPLLDAAPPAAAGICNLLLVA*LKNVSL
Trigger: CAAAGAAACGTTCTTCAACAATGCCACAAGAAGTAG...GTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGGCGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CAA 90 bp GATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGCACTGTGGTTGCATTCTGGCTTTCCAGAAATaGGATTCATCCGCTCTTTCT +
Preference number: 5 (lower is better)
Translates to: DAAPPAAAGICNMHCGCILAFQK*DSSALS
Trigger: AGAAAGAGCGGATGAATCCAATTTCTGGAAAGCCAG...AATGCAACCACAGTGCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CAA 90 bp ACGCCAGTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATTCAGGTCCATGTTCTaGTCGTACTTTTCTTCTAGT +
Preference number: 5 (lower is better)
Translates to: TPVLYWMLPLLRPPVSATFRSMF*SYFSSS
Trigger: ACTAGAAGAAAAGTACGACAAGAACATGGACCTGAA...TGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CAA 90 bp GATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGCACTGTGGTTGCATTAATGTGCATGCTTGCTaGGTCAAGAATGGTCTATGG +
Preference number: 5 (lower is better)
Translates to: DAAPPAAAGICNMHCGCINVHAC*VKNGLW
Trigger: CCATAGACCATTCTTGACCAAGCAAGCATGCACATT...AATGCAACCACAGTGCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR CAA 90 bp GTGATTTCACAGCAGTGTGACTCCAACGCCAGTCCTCTACTGGATGCTGCCCCTTGCCACACTTCGCCGTaGATGGATTTGCAAACGCTT +
Preference number: 5 (lower is better)
Translates to: VISQQCDSNASPLLDAAPCHTSP*MDLQTL
Trigger: AAGCGTTTGCAAATCCATCAACGGCGAAGTGTGGCA...AGGGGCAGCATCCAGTAGAGGACTGGCGTTGGAGTCACACTGCTGTGAAATCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CAA 90 bp CAGCAGTGTGACTCCAACGCCAGTCCTCTACTGGATGCTGCCCCTCCTGCGGCCATCCTTGGCCATTTCTaGTATTGCATTAAGAATCTC +
Preference number: 5 (lower is better)
Translates to: QQCDSNASPLLDAAPPAAILGHF*YCIKNL
Trigger: GAGATTCTTAATGCAATACAAGAAATGGCCAAGGAT...GGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGGCGTTGGAGTCACACTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392977.8
ENST00000644049.1
CDS-3UTR CAA 90 bp CCAGTCCTCTACTGGATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGCATCCTTGGCCATTTCTaGTATTGCATTAAGAATCTC +
Preference number: 5 (lower is better)
Translates to: PVLYWMLPLLRPPVSATCILGHF*YCIKNL
Trigger: GAGATTCTTAATGCAATACAAGAAATGGCCAAGGAT...GCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCATCCAGTAGAGGACTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392977.8
ENST00000644049.1
CDS-3UTR CAA 90 bp GTGATTTCACAGCAGTGTGACTCCAACGCCAGTCCTCTACTGGATGCTGCCCCTCTATGTCTTTGGCCCTaGAAGCTAAAGGTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: VISQQCDSNASPLLDAAPLCLWP*KLKVSS
Trigger: GGAGGAGACCTTTAGCTTCAAGGGCCAAAGACATAG...AGGGGCAGCATCCAGTAGAGGACTGGCGTTGGAGTCACACTGCTGTGAAATCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS GCA 90 bp TGGTCTGCCTTGTACGTATGGATTTTTCCAGTGGGTAAGCCCAATTaGCACAGGCCCCGCAACGTCATAACCTATGGTGATCTGGCTGAC +
Preference number: 5 (lower is better)
Translates to: WSALYVWIFPVGKPN*HRPRNVITYGDLAD
Trigger: GTCAGCCAGATCACCATAGGTTATGACGTTGCGGGGCCTGTGGCAATTGGGCTTACCCACTGGAAAAATCCATACGTACAAGGCAGACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000549155.6
ENST00000644049.1
CDS-3UTR CAA 90 bp GTGATTTCACAGCAGTGTGACTCCAACGCCAGTCCTCTACTGGATGCTGCCCCTGCCGTATGCAGTTGTTaGTGCTGTAAAAACCCTGAG +
Preference number: 5 (lower is better)
Translates to: VISQQCDSNASPLLDAAPAVCSC*CCKNPE
Trigger: CTCAGGGTTTTTACAGCACAAACAACTGCATACGGC...AGGGGCAGCATCCAGTAGAGGACTGGCGTTGGAGTCACACTGCTGTGAAATCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392977.8
ENST00000392979.7
CDS-3UTR CAA 90 bp GAAAGGGGCAGTGTAGCAGTCATTCTCCTCCAGGTCTGGCAGTGTCTCCTTGTCAGTCCACATCACTCTTaGGCCCGTCAGGTAGTATTT +
Preference number: 5 (lower is better)
Translates to: ERGSVAVILLQVWQCLLVSPHHS*ARQVVF
Trigger: AAATACTACCTGACGGGCCAAAGAGTGATGTGGACT...GACAAGGAGACACTGCCAGACCTGGAGGAGAATGACTGCTACACTGCCCCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549155.6
CDS-3UTR CAA 90 bp ATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGCACTGTGGTTGCATTTCCGAAACCTGCTTATTaGTTTATCGATCCTGCTCAT +
Preference number: 5 (lower is better)
Translates to: MLPLLRPPVSATCTVVAFPKPAY*FIDPAH
Trigger: ATGAGCAGGATCGATAAACAAATAAGCAGGTTTCGG...AAATGCAACCACAGTGCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CAA 90 bp ATGCTGCCCCTCCTGCGGCCGCCGGTATCTGCAACATGCACTGTGGTTGCATTTTTCATCCGCTCTTTCTaGGAATACTTGGCTTCAAAC +
Preference number: 5 (lower is better)
Translates to: MLPLLRPPVSATCTVVAFFIRSF*EYLASN
Trigger: GTTTGAAGCCAAGTATTCCAAGAAAGAGCGGATGAA...AAATGCAACCACAGTGCATGTTGCAGATACCGGCGGCCGCAGGAGGGGCAGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CAA 90 bp ATTCTCCTCCAGGTCTGGCAGTGTCTCCTTGTCCAGCCTCATTGGCTTCTTAGGAGTAGCTGCCCGTCGTaGCAGAGGAAAGGTTATAAC +
Preference number: 5 (lower is better)
Translates to: ILLQVWQCLLVQPHWLLRSSCPS*QRKGYN
Trigger: GTTATAACCTTTCCTCTGCAACGACGGGCAGCTACT...CCTAAGAAGCCAATGAGGCTGGACAAGGAGACACTGCCAGACCTGGAGGAGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549155.6
CDS-3UTR CAA 90 bp GCAGTCATTCTCCTCCAGGTCTGGCAGTGTCTCCTTGTCCAGCCTCATTGGCTTGAGGGTTGGTCTGCCTaGTACGTATGGATTTTTCCA +
Preference number: 5 (lower is better)
Translates to: AVILLQVWQCLLVQPHWLEGWSA*YVWIFP
Trigger: TGGAAAAATCCATACGTACAAGGCAGACCAACCCTC...AAGCCAATGAGGCTGGACAAGGAGACACTGCCAGACCTGGAGGAGAATGACTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000549155.6
CDS TCA 90 bp GTACACAGGGATGCCTGCATCTTTGGAGACGAAGAGAGGCAGATCTaGTGGGAGGGTTGGTCTGCCTTGTACGTATGGATTTTTCCAGTG +
Preference number: 5 (lower is better)
Translates to: VHRDACIFGDEERQI*WEGWSALYVWIFPV
Trigger: CACTGGAAAAATCCATACGTACAAGGCAGACCAACCCTCCCATCAGATCTGCCTCTCTTCGTCTCCAAAGATGCAGGCATCCCTGTGTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000549155.6
ENST00000644049.1
CDS-3UTR CAA 90 bp CCAGAAGAAGTAAACAGAATTCAGGTCCTTGGCCTGGAAAGGGACTATTTTATGGTGACGCTGGGCGGCTaGCCACACTTCGCCGTTGAT +
Preference number: 5 (lower is better)
Translates to: PEEVNRIQVLGLERDYFMVTLGG*PHFAVD
Trigger: ATCAACGGCGAAGTGTGGCAAGCCGCCCAGCGTCAC...CATAAAATAGTCCCTTTCCAGGCCAAGGACCTGAATTCTGTTTACTTCTTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CAA 90 bp TGTAGCAGTCATTCTCCTCCAGGTCTGGCAGTGTCTCCTTGTCCAGCCTCATTGTTGCCTCCATTTTTATaGACCTTCTGCCTGGTGGGA +
Preference number: 5 (lower is better)
Translates to: CSSHSPPGLAVSPCPASLLPPFL*TFCLVG
Trigger: TCCCACCAGGCAGAAGGTCAATAAAAATGGAGGCAA...CAATGAGGCTGGACAAGGAGACACTGCCAGACCTGGAGGAGAATGACTGCTACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000549155.6
CDS-3UTR CAA 90 bp GAATGTGTGTCCATGTGTCTGAATACCCTTTTTAGCCCAGTGTCTGTAAAATTCGTGACGCTGGGCGGCTaGCCACACTTCGCCGTTGAT +
Preference number: 5 (lower is better)
Translates to: ECVSMCLNTLFSPVSVKFVTLGG*PHFAVD
Trigger: ATCAACGGCGAAGTGTGGCAAGCCGCCCAGCGTCAC...GAATTTTACAGACACTGGGCTAAAAAGGGTATTCAGACACATGGACACACATTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CAA 90 bp GCTTTTGCACAGCCAGAAGAAGTAAACAGAATTCAGGTCCTTGGCCTGGAAAGGATCCAGCTGGTAGCCTaGCAAATCCACACCTCCTTC +
Preference number: 5 (lower is better)
Translates to: AFAQPEEVNRIQVLGLERIQLVA*QIHTSF
Trigger: GAAGGAGGTGTGGATTTGCAAGGCTACCAGCTGGAT...CCTTTCCAGGCCAAGGACCTGAATTCTGTTTACTTCTTCTGGCTGTGCAAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392977.8
ENST00000644049.1
CDS-3UTR CAA 90 bp GTGATTTCACAGCAGTGTGACTCCAACGCCAGTCCTCTACTGGATGCTGCCCCTCCGAAACCTGCTTATTaGTTTATCGATCCTGCTCAT +
Preference number: 5 (lower is better)
Translates to: VISQQCDSNASPLLDAAPPKPAY*FIDPAH
Trigger: ATGAGCAGGATCGATAAACAAATAAGCAGGTTTCGG...AGGGGCAGCATCCAGTAGAGGACTGGCGTTGGAGTCACACTGCTGTGAAATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS GCA 90 bp ACCTATGGTGATCTGGCTGACACAACTGTAGTAGCTGCCCGTCGTTaGAGAGGAAAGGTTATAACTTCCGCTGCTCACATCTTTGTCGTA +
Preference number: 5 (lower is better)
Translates to: TYGDLADTTVVAARR*RGKVITSAAHIFVV
Trigger: TACGACAAAGATGTGAGCAGCGGAAGTTATAACCTTTCCTCTGCAACGACGGGCAGCTACTACAGTTGTGTCAGCCAGATCACCATAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549155.6
ENST00000644049.1
CDS CCA 90 bp GTGTGCTTTTGCACAGCCAGAAGAAGTAAACAGAATTCAGGTCCTTaGCCTGGAAAGGGACTATTTTATGGTCACGGCCACTCGTTGTGG +
Preference number: 5 (lower is better)
Translates to: VCFCTARRSKQNSGP*PGKGLFYGHGHSLW
Trigger: CCACAACGAGTGGCCGTGACCATAAAATAGTCCCTTTCCAGGCCAAGGACCTGAATTCTGTTTACTTCTTCTGGCTGTGCAAAAGCACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000550015.1
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR CAA 90 bp GAGAATGTAACTGCCCATAATGTGCATGCTTGCTTGGTCAAGAATGGTCTATGGTCTGGCAGTGTCTCCTaGTCCAGCCTCATTGGCTTC +
Preference number: 5 (lower is better)
Translates to: ENVTAHNVHACLVKNGLWSGSVS*SSLIGF
Trigger: GAAGCCAATGAGGCTGGACAAGGAGACACTGCCAGA...CCATAGACCATTCTTGACCAAGCAAGCATGCACATTATGGGCAGTTACATTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CAA 90 bp AAGGTAGCAAACAGGCTGAAAAACAGGCCCAGTATACAAGTTCCCCTTGATTTTGCCAACCATGCACTTTaGCCCAGCTTCTCCTTGGCC +
Preference number: 5 (lower is better)
Translates to: KVANRLKNRPSIQVPLDFANHAL*PSFSLA
Trigger: GGCCAAGGAGAAGCTGGGCAAAAGTGCATGGTTGGC...AAAATCAAGGGGAACTTGTATACTGGGCCTGTTTTTCAGCCTGTTTGCTACCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR CAA 90 bp GGTGACATGGAATTAGGACCATATGATGACATTCTAGGAATGTGTGTCCATGTGGCCAACCATGCACTTTaGCCCAGCTTCTCCTTGGCC +
Preference number: 5 (lower is better)
Translates to: GDMELGPYDDILGMCVHVANHAL*PSFSLA
Trigger: GGCCAAGGAGAAGCTGGGCAAAAGTGCATGGTTGGC...CACATGGACACACATTCCTAGAATGTCATCATATGGTCCTAATTCCATGTCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000575847.8
CDS-3UTR CAA 90 bp ACTGCCCATAATGTGCATGCTTGCTTGGTCAAGAATGGTCTATGGATAGATAGCGGTCACGGCCACTCGTaGTGGTGTGCTTTTCCATTC +
Preference number: 5 (lower is better)
Translates to: TAHNVHACLVKNGLWIDSGHGHS*WCAFPF
Trigger: GAATGGAAAAGCACACCACAACGAGTGGCCGTGACC...GCTATCTATCCATAGACCATTCTTGACCAAGCAAGCATGCACATTATGGGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS GCA 90 bp GCCTGGCCAGCAATACTGCTCTCAGCAGAAGAAGGTCCACTGGACTaGATGCTATATGAAGAATGTCAGAAAAGTTCAACTAAAGCCAGG +
Preference number: 5 (lower is better)
Translates to: AWPAILLSAEEGPLD*MLYEECQKSSTKAR
Trigger: CCTGGCTTTAGTTGAACTTTTCTGACATTCTTCATATAGCATGCAGTCCAGTGGACCTTCTTCTGCTGAGAGCAGTATTGCTGGCCAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546991.1
CDS-3UTR CAA 90 bp GTGATTTCACAGCAGTGTGACTCCAACGCCAGTCCTCTACTGGATGCTGCCCCTAGAATATTGACATCCTaGGCCATTTCTTGTATTGCA +
Preference number: 5 (lower is better)
Translates to: VISQQCDSNASPLLDAAPRILTS*AISCIA
Trigger: TGCAATACAAGAAATGGCCAAGGATGTCAATATTCT...AGGGGCAGCATCCAGTAGAGGACTGGCGTTGGAGTCACACTGCTGTGAAATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392977.8
ENST00000644049.1
CDS-3UTR CAA 90 bp TTCTTTGTTGTGTATGATGAAGTGATGGATCCTTTGCTGGCTGAAAGGGGCAGTGAAGTGATGGATCCTTaGCTGGCTGAAAGGGGCAGT +
Preference number: 5 (lower is better)
Translates to: FFVVYDEVMDPLLAERGSEVMDP*LAERGS
Trigger: ACTGCCCCTTTCAGCCAGCAAAGGATCCATCACTTC...ACTGCCCCTTTCAGCCAGCAAAGGATCCATCACTTCATCATACACAACAAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549155.6
CDS-3UTR CAA 90 bp GAGAATGTAACTGCCCATAATGTGCATGCTTGCTTGGTCAAGAATGGTCTATGGGAAGTGATGGATCCTTaGCTGGCTGAAAGGGGCAGT +
Preference number: 5 (lower is better)
Translates to: ENVTAHNVHACLVKNGLWEVMDP*LAERGS
Trigger: ACTGCCCCTTTCAGCCAGCAAAGGATCCATCACTTC...CCATAGACCATTCTTGACCAAGCAAGCATGCACATTATGGGCAGTTACATTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CAA 90 bp ACTGCCCATAATGTGCATGCTTGCTTGGTCAAGAATGGTCTATGGATAGATAGCCAGCAGTCCCTGTGGTaGCAACCTGAGAGTTATTCC +
Preference number: 5 (lower is better)
Translates to: TAHNVHACLVKNGLWIDSQQSLW*QPESYS
Trigger: GGAATAACTCTCAGGTTGCAACCACAGGGACTGCTG...GCTATCTATCCATAGACCATTCTTGACCAAGCAAGCATGCACATTATGGGCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CAA 90 bp GAATGTGTGTCCATGTGTCTGAATACCCTTTTTAGCCCAGTGTCTGTAAAATTCGCCAACCATGCACTTTaGCCCAGCTTCTCCTTGGCC +
Preference number: 5 (lower is better)
Translates to: ECVSMCLNTLFSPVSVKFANHAL*PSFSLA
Trigger: GGCCAAGGAGAAGCTGGGCAAAAGTGCATGGTTGGC...GAATTTTACAGACACTGGGCTAAAAAGGGTATTCAGACACATGGACACACATTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR CAA 90 bp CTTGAGAATGTAACTGCCCATAATGTGCATGCTTGCTTGGTCAAGAATGGTCTAGGTCACGGCCACTCGTaGTGGTGTGCTTTTCCATTC +
Preference number: 5 (lower is better)
Translates to: LENVTAHNVHACLVKNGLGHGHS*WCAFPF
Trigger: GAATGGAAAAGCACACCACAACGAGTGGCCGTGACC...TAGACCATTCTTGACCAAGCAAGCATGCACATTATGGGCAGTTACATTCTCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR CAA 90 bp GAGAATGTAACTGCCCATAATGTGCATGCTTGCTTGGTCAAGAATGGTCTATGGGATCTGATGGGAGGGTaGGTCTGCCTTGTACGTATG +
Preference number: 5 (lower is better)
Translates to: ENVTAHNVHACLVKNGLWDLMGG*VCLVRM
Trigger: CATACGTACAAGGCAGACCAACCCTCCCATCAGATC...CCATAGACCATTCTTGACCAAGCAAGCATGCACATTATGGGCAGTTACATTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644049.1
CDS TCA 90 bp TCCAATCTGCTGGCATCATCTGAAGTACTAGTCAGGTTTCCAGGGTaGAGAAGAGAATCGTCATCTTTGCAAGGACTGCTGACAGCTTCT +
Preference number: 5 (lower is better)
Translates to: SNLLASSEVLVRFPG*RRESSSLQGLLTAS
Trigger: AGAAGCTGTCAGCAGTCCTTGCAAAGATGACGATTCTCTTCTTCACCCTGGAAACCTGACTAGTACTTCAGATGATGCCAGCAGATTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000549155.6
ENST00000644049.1
CDS GCA 90 bp ATTCACATAGCCAACCATGCACTTTTGCCCAGCTTCTCCTTGGCCTaGACAAGGTCCATACTTATAAGCATACACCAAGCGAGGGATAAA +
Preference number: 5 (lower is better)
Translates to: IHIANHALLPSFSLA*TRSILISIHQARDK
Trigger: TTTATCCCTCGCTTGGTGTATGCTTATAAGTATGGACCTTGTGCAGGCCAAGGAGAAGCTGGGCAAAAGTGCATGGTTGGCTATGTGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000550015.1
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR CAA 90 bp GGTTGCATTTTTAGTCATTCACTTGAGTGTGCTTTTGCACAGCCAGAAGAAGTATCTGGCAGTGTCTCCTaGTCCAGCCTCATTGGCTTC +
Preference number: 5 (lower is better)
Translates to: GCIFSHSLECAFAQPEEVSGSVS*SSLIGF
Trigger: GAAGCCAATGAGGCTGGACAAGGAGACACTGCCAGA...TACTTCTTCTGGCTGTGCAAAAGCACACTCAAGTGAATGACTAAAAATGCAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CAA 90 bp TCCAGGTCTGGCAGTGTCTCCTTGTCCAGCCTCATTGGCTTCTTAGGTAACCATCTTCTTGTGGCATTGTaGAAGAACGTTTCTTTGTTG +
Preference number: 5 (lower is better)
Translates to: SRSGSVSLSSLIGFLGNHLLVAL*KNVSLL
Trigger: CAACAAAGAAACGTTCTTCAACAATGCCACAAGAAG...ATGGTTACCTAAGAAGCCAATGAGGCTGGACAAGGAGACACTGCCAGACCTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549155.6
CDS-3UTR CAA 90 bp GCTTTTGCACAGCCAGAAGAAGTAAACAGAATTCAGGTCCTTGGCCTGGAAAGGCTGGCTTTCCAGAAATaGGATTCATCCGCTCTTTCT +
Preference number: 5 (lower is better)
Translates to: AFAQPEEVNRIQVLGLERLAFQK*DSSALS
Trigger: AGAAAGAGCGGATGAATCCAATTTCTGGAAAGCCAG...CCTTTCCAGGCCAAGGACCTGAATTCTGTTTACTTCTTCTGGCTGTGCAAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CAA 90 bp CTTGAGAATGTAACTGCCCATAATGTGCATGCTTGCTTGGTCAAGAATGGTCTACAGCAGTCCCTGTGGTaGCAACCTGAGAGTTATTCC +
Preference number: 5 (lower is better)
Translates to: LENVTAHNVHACLVKNGLQQSLW*QPESYS
Trigger: GGAATAACTCTCAGGTTGCAACCACAGGGACTGCTG...TAGACCATTCTTGACCAAGCAAGCATGCACATTATGGGCAGTTACATTCTCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CAA 90 bp GAGAATGTAACTGCCCATAATGTGCATGCTTGCTTGGTCAAGAATGGTCTATGGGATCCCTTAGGTCTTTaGGGAGGTCTGGGATCAGAT +
Preference number: 5 (lower is better)
Translates to: ENVTAHNVHACLVKNGLWDPLGL*GGLGSD
Trigger: ATCTGATCCCAGACCTCCCAAAAGACCTAAGGGATC...CCATAGACCATTCTTGACCAAGCAAGCATGCACATTATGGGCAGTTACATTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR CAA 90 bp GAATGTGTGTCCATGTGTCTGAATACCCTTTTTAGCCCAGTGTCTGTAAAATTCGGTCACGGCCACTCGTaGTGGTGTGCTTTTCCATTC +
Preference number: 5 (lower is better)
Translates to: ECVSMCLNTLFSPVSVKFGHGHS*WCAFPF
Trigger: GAATGGAAAAGCACACCACAACGAGTGGCCGTGACC...GAATTTTACAGACACTGGGCTAAAAAGGGTATTCAGACACATGGACACACATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR CAA 90 bp TTGTTTATCGATCCTGCTCATGAACTTGTAACGGCGGGGCAGGTAATAGATTTTGATCTGATGGGAGGGTaGGTCTGCCTTGTACGTATG +
Preference number: 5 (lower is better)
Translates to: LFIDPAHELVTAGQVIDFDLMGG*VCLVRM
Trigger: CATACGTACAAGGCAGACCAACCCTCCCATCAGATC...AAAATCTATTACCTGCCCCGCCGTTACAAGTTCATGAGCAGGATCGATAAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549155.6
CDS GCA 90 bp GGCCAGCAATACTGCTCTCAGCAGAAGAAGGTCCACTGGACTGCATaGTATATGAAGAATGTCAGAAAAGTTCAACTAAAGCCAGGAATG +
Preference number: 5 (lower is better)
Translates to: GQQYCSQQKKVHWTA*YMKNVRKVQLKPGM
Trigger: CATTCCTGGCTTTAGTTGAACTTTTCTGACATTCTTCATATAGCATGCAGTCCAGTGGACCTTCTTCTGCTGAGAGCAGTATTGCTGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546991.1
CDS CCA 90 bp GCTCAGATCGGTTCTCAAAGTCAGAAATTCGAAATACAGACAAGCTaGCATTCACATAGCCAACCATGCACTTTTGCCCAGCTTCTCCTT +
Preference number: 5 (lower is better)
Translates to: AQIGSQSQKFEIQTS*HSHSQPCTFAQLLL
Trigger: AAGGAGAAGCTGGGCAAAAGTGCATGGTTGGCTATGTGAATGCCAGCTTGTCTGTATTTCGAATTTCTGACTTTGAGAACCGATCTGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000550015.1
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR CAA 90 bp GGTTGCATTTTTAGTCATTCACTTGAGTGTGCTTTTGCACAGCCAGAAGAAGTATCCTTCCTCAGTGCCTaGGTGTCTTCGGCAGAAAGA +
Preference number: 5 (lower is better)
Translates to: GCIFSHSLECAFAQPEEVSFLSA*VSSAER
Trigger: TCTTTCTGCCGAAGACACCAAGGCACTGAGGAAGGA...TACTTCTTCTGGCTGTGCAAAAGCACACTCAAGTGAATGACTAAAAATGCAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392977.8
ENST00000392979.7
CDS-3UTR CAA 90 bp ACTGCCCATAATGTGCATGCTTGCTTGGTCAAGAATGGTCTATGGATAGATAGCTTGCCTCCATTTTTATaGACCTTCTGCCTGGTGGGA +
Preference number: 5 (lower is better)
Translates to: TAHNVHACLVKNGLWIDSLPPFL*TFCLVG
Trigger: TCCCACCAGGCAGAAGGTCAATAAAAATGGAGGCAA...GCTATCTATCCATAGACCATTCTTGACCAAGCAAGCATGCACATTATGGGCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CAA 90 bp GAGAATGTAACTGCCCATAATGTGCATGCTTGCTTGGTCAAGAATGGTCTATGGTTGCCTCCATTTTTATaGACCTTCTGCCTGGTGGGA +
Preference number: 5 (lower is better)
Translates to: ENVTAHNVHACLVKNGLWLPPFL*TFCLVG
Trigger: TCCCACCAGGCAGAAGGTCAATAAAAATGGAGGCAA...CCATAGACCATTCTTGACCAAGCAAGCATGCACATTATGGGCAGTTACATTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CAA 90 bp GAAGAACGTTTCTTTGTTGTGTATGATGAAGTGATGGATCCTTTGCTGGCTGAAATCCAGCTGGTAGCCTaGCAAATCCACACCTCCTTC +
Preference number: 5 (lower is better)
Translates to: EERFFVVYDEVMDPLLAEIQLVA*QIHTSF
Trigger: GAAGGAGGTGTGGATTTGCAAGGCTACCAGCTGGAT...TTCAGCCAGCAAAGGATCCATCACTTCATCATACACAACAAAGAAACGTTCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549155.6
CDS-3UTR CAA 90 bp TCATTCTCCTCCAGGTCTGGCAGTGTCTCCTTGTCCAGCCTCATTGGCTTCTTAAGAATATTGACATCCTaGGCCATTTCTTGTATTGCA +
Preference number: 5 (lower is better)
Translates to: SFSSRSGSVSLSSLIGFLRILTS*AISCIA
Trigger: TGCAATACAAGAAATGGCCAAGGATGTCAATATTCT...TAAGAAGCCAATGAGGCTGGACAAGGAGACACTGCCAGACCTGGAGGAGAATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549155.6
CDS-3UTR CAA 90 bp TTCTTTGTTGTGTATGATGAAGTGATGGATCCTTTGCTGGCTGAAAGGGGCAGTAGAGAATCGTCATCTTaGCAAGGACTGCTGACAGCT +
Preference number: 5 (lower is better)
Translates to: FFVVYDEVMDPLLAERGSRESSS*QGLLTA
Trigger: AGCTGTCAGCAGTCCTTGCAAAGATGACGATTCTCT...ACTGCCCCTTTCAGCCAGCAAAGGATCCATCACTTCATCATACACAACAAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549155.6
CDS-3UTR CAA 90 bp GAGAATGTAACTGCCCATAATGTGCATGCTTGCTTGGTCAAGAATGGTCTATGGAGAGAATCGTCATCTTaGCAAGGACTGCTGACAGCT +
Preference number: 5 (lower is better)
Translates to: ENVTAHNVHACLVKNGLWRESSS*QGLLTA
Trigger: AGCTGTCAGCAGTCCTTGCAAAGATGACGATTCTCT...CCATAGACCATTCTTGACCAAGCAAGCATGCACATTATGGGCAGTTACATTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CAA 90 bp GCTTTTGCACAGCCAGAAGAAGTAAACAGAATTCAGGTCCTTGGCCTGGAAAGGTACAAGATCCAAAGGTaGGTATTTATACCACACGCC +
Preference number: 5 (lower is better)
Translates to: AFAQPEEVNRIQVLGLERYKIQR*VFIPHA
Trigger: GGCGTGTGGTATAAATACCAACCTTTGGATCTTGTA...CCTTTCCAGGCCAAGGACCTGAATTCTGTTTACTTCTTCTGGCTGTGCAAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CAA 90 bp GCTTTTGCACAGCCAGAAGAAGTAAACAGAATTCAGGTCCTTGGCCTGGAAAGGATAATGATACAGAAGTaGATGCACACAGCAGTCCCT +
Preference number: 5 (lower is better)
Translates to: AFAQPEEVNRIQVLGLERIMIQK*MHTAVP
Trigger: AGGGACTGCTGTGTGCATCAACTTCTGTATCATTAT...CCTTTCCAGGCCAAGGACCTGAATTCTGTTTACTTCTTCTGGCTGTGCAAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CAA 90 bp GGTTGCATTTTTAGTCATTCACTTGAGTGTGCTTTTGCACAGCCAGAAGAAGTATGCCACACTTCGCCGTaGATGGATTTGCAAACGCTT +
Preference number: 5 (lower is better)
Translates to: GCIFSHSLECAFAQPEEVCHTSP*MDLQTL
Trigger: AAGCGTTTGCAAATCCATCAACGGCGAAGTGTGGCA...TACTTCTTCTGGCTGTGCAAAAGCACACTCAAGTGAATGACTAAAAATGCAACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CAA 90 bp CTTGAGAATGTAACTGCCCATAATGTGCATGCTTGCTTGGTCAAGAATGGTCTAAGTCCACATCACTCTTaGGCCCGTCAGGTAGTATTT +
Preference number: 5 (lower is better)
Translates to: LENVTAHNVHACLVKNGLSPHHS*ARQVVF
Trigger: AAATACTACCTGACGGGCCAAAGAGTGATGTGGACT...TAGACCATTCTTGACCAAGCAAGCATGCACATTATGGGCAGTTACATTCTCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392977.8
ENST00000644049.1
CDS-3UTR CAA 90 bp CCAGAAGAAGTAAACAGAATTCAGGTCCTTGGCCTGGAAAGGGACTATTTTATGAGTCCACATCACTCTTaGGCCCGTCAGGTAGTATTT +
Preference number: 5 (lower is better)
Translates to: PEEVNRIQVLGLERDYFMSPHHS*ARQVVF
Trigger: AAATACTACCTGACGGGCCAAAGAGTGATGTGGACT...CATAAAATAGTCCCTTTCCAGGCCAAGGACCTGAATTCTGTTTACTTCTTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392977.8
ENST00000644049.1
CDS-3UTR CAA 90 bp CTTGAGAATGTAACTGCCCATAATGTGCATGCTTGCTTGGTCAAGAATGGTCTAAGAGAATCGTCATCTTaGCAAGGACTGCTGACAGCT +
Preference number: 5 (lower is better)
Translates to: LENVTAHNVHACLVKNGLRESSS*QGLLTA
Trigger: AGCTGTCAGCAGTCCTTGCAAAGATGACGATTCTCT...TAGACCATTCTTGACCAAGCAAGCATGCACATTATGGGCAGTTACATTCTCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CAA 90 bp CCAGAAGAAGTAAACAGAATTCAGGTCCTTGGCCTGGAAAGGGACTATTTTATGGACTTCTTTACTGACTaGGCTGTGATCCAGAGTGGT +
Preference number: 5 (lower is better)
Translates to: PEEVNRIQVLGLERDYFMDFFTD*AVIQSG
Trigger: ACCACTCTGGATCACAGCCAAGTCAGTAAAGAAGTC...CATAAAATAGTCCCTTTCCAGGCCAAGGACCTGAATTCTGTTTACTTCTTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CAA 90 bp GAGAATGTAACTGCCCATAATGTGCATGCTTGCTTGGTCAAGAATGGTCTATGGAAAAGGTGGGTTACCTaGGCATATACACAGCTGTCT +
Preference number: 5 (lower is better)
Translates to: ENVTAHNVHACLVKNGLWKRWVT*AYTQLS
Trigger: AGACAGCTGTGTATATGCCAAGGTAACCCACCTTTT...CCATAGACCATTCTTGACCAAGCAAGCATGCACATTATGGGCAGTTACATTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CAA 90 bp GGTGACATGGAATTAGGACCATATGATGACATTCTAGGAATGTGTGTCCATGTGAAGACAGTGGCTCCATaGTCAAAAAGGTGGGTTACC +
Preference number: 5 (lower is better)
Translates to: GDMELGPYDDILGMCVHVKTVAP*SKRWVT
Trigger: GGTAACCCACCTTTTTGACAATGGAGCCACTGTCTT...CACATGGACACACATTCCTAGAATGTCATCATATGGTCCTAATTCCATGTCACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392977.8
ENST00000392979.7
CDS-3UTR CAA 90 bp GGACCATATGATGACATTCTAGGAATGTGTGTCCATGTGTCTGAATACCCTTTTCTATGTCTTTGGCCCTaGAAGCTAAAGGTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: GPYDDILGMCVHVSEYPFLCLWP*KLKVSS
Trigger: GGAGGAGACCTTTAGCTTCAAGGGCCAAAGACATAG...AAAAGGGTATTCAGACACATGGACACACATTCCTAGAATGTCATCATATGGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CAA 90 bp GGACCATATGATGACATTCTAGGAATGTGTGTCCATGTGTCTGAATACCCTTTTGATCCCTTAGGTCTTTaGGGAGGTCTGGGATCAGAT +
Preference number: 5 (lower is better)
Translates to: GPYDDILGMCVHVSEYPFDPLGL*GGLGSD
Trigger: ATCTGATCCCAGACCTCCCAAAAGACCTAAGGGATC...AAAAGGGTATTCAGACACATGGACACACATTCCTAGAATGTCATCATATGGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR CAA 90 bp GGTTGCATTTTTAGTCATTCACTTGAGTGTGCTTTTGCACAGCCAGAAGAAGTAGATCCCTTAGGTCTTTaGGGAGGTCTGGGATCAGAT +
Preference number: 5 (lower is better)
Translates to: GCIFSHSLECAFAQPEEVDPLGL*GGLGSD
Trigger: ATCTGATCCCAGACCTCCCAAAAGACCTAAGGGATC...TACTTCTTCTGGCTGTGCAAAAGCACACTCAAGTGAATGACTAAAAATGCAACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR CAA 90 bp GAGAATGTAACTGCCCATAATGTGCATGCTTGCTTGGTCAAGAATGGTCTATGGAATGTGCATGCTTGCTaGGTCAAGAATGGTCTATGG +
Preference number: 5 (lower is better)
Translates to: ENVTAHNVHACLVKNGLWNVHAC*VKNGLW
Trigger: CCATAGACCATTCTTGACCAAGCAAGCATGCACATT...CCATAGACCATTCTTGACCAAGCAAGCATGCACATTATGGGCAGTTACATTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR CAA 90 bp CCAGAAGAAGTAAACAGAATTCAGGTCCTTGGCCTGGAAAGGGACTATTTTATGAGAATATTGACATCCTaGGCCACTGGGTGGAAGACT +
Preference number: 5 (lower is better)
Translates to: PEEVNRIQVLGLERDYFMRILTS*ATGWKT
Trigger: AGTCTTCCACCCAGTGGCCAAGGATGTCAATATTCT...CATAAAATAGTCCCTTTCCAGGCCAAGGACCTGAATTCTGTTTACTTCTTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392979.7
CDS-3UTR CAA 90 bp GGTTGCATTTTTAGTCATTCACTTGAGTGTGCTTTTGCACAGCCAGAAGAAGTAAGTAGCTGCCCGTCGTaGCAGAGGAAAGGTTATAAC +
Preference number: 5 (lower is better)
Translates to: GCIFSHSLECAFAQPEEVSSCPS*QRKGYN
Trigger: GTTATAACCTTTCCTCTGCAACGACGGGCAGCTACT...TACTTCTTCTGGCTGTGCAAAAGCACACTCAAGTGAATGACTAAAAATGCAACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644049.1
CDS-3UTR CAA 90 bp GGTTGCATTTTTAGTCATTCACTTGAGTGTGCTTTTGCACAGCCAGAAGAAGTATTGCCTCCATTTTTATaGACCTTCTGCCTGGTGGGA +
Preference number: 5 (lower is better)
Translates to: GCIFSHSLECAFAQPEEVLPPFL*TFCLVG
Trigger: TCCCACCAGGCAGAAGGTCAATAAAAATGGAGGCAA...TACTTCTTCTGGCTGTGCAAAAGCACACTCAAGTGAATGACTAAAAATGCAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CAA 90 bp TGCAACATGCACTGTGGTTGCATTTTTAGTCATTCACTTGAGTGTGCTTTTGCAAGAGAATCGTCATCTTaGCAAGGACTGCTGACAGCT +
Preference number: 5 (lower is better)
Translates to: CNMHCGCIFSHSLECAFARESSS*QGLLTA
Trigger: AGCTGTCAGCAGTCCTTGCAAAGATGACGATTCTCT...TGCAAAAGCACACTCAAGTGAATGACTAAAAATGCAACCACAGTGCATGTTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CAA 90 bp GGACCATATGATGACATTCTAGGAATGTGTGTCCATGTGTCTGAATACCCTTTTGACTTCTTTACTGACTaGGCTGTGATCCAGAGTGGT +
Preference number: 5 (lower is better)
Translates to: GPYDDILGMCVHVSEYPFDFFTD*AVIQSG
Trigger: ACCACTCTGGATCACAGCCAAGTCAGTAAAGAAGTC...AAAAGGGTATTCAGACACATGGACACACATTCCTAGAATGTCATCATATGGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CAA 90 bp GAGAATGTAACTGCCCATAATGTGCATGCTTGCTTGGTCAAGAATGGTCTATGGGATGATATCTGTAGCTaGGCAGACTTCTTTACTGAC +
Preference number: 5 (lower is better)
Translates to: ENVTAHNVHACLVKNGLWDDICS*ADFFTD
Trigger: GTCAGTAAAGAAGTCTGCCAAGCTACAGATATCATC...CCATAGACCATTCTTGACCAAGCAAGCATGCACATTATGGGCAGTTACATTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CAA 90 bp GGACCATATGATGACATTCTAGGAATGTGTGTCCATGTGTCTGAATACCCTTTTAAGACAGTGGCTCCATaGTCAAAAAGGTGGGTTACC +
Preference number: 5 (lower is better)
Translates to: GPYDDILGMCVHVSEYPFKTVAP*SKRWVT
Trigger: GGTAACCCACCTTTTTGACAATGGAGCCACTGTCTT...AAAAGGGTATTCAGACACATGGACACACATTCCTAGAATGTCATCATATGGTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CAA 90 bp GCTTTTGCACAGCCAGAAGAAGTAAACAGAATTCAGGTCCTTGGCCTGGAAAGGTTTATCTGTAAATGCTaGATAAGGTTCTGGCTTTCC +
Preference number: 5 (lower is better)
Translates to: AFAQPEEVNRIQVLGLERFICKC*IRFWLS
Trigger: GGAAAGCCAGAACCTTATCAAGCATTTACAGATAAA...CCTTTCCAGGCCAAGGACCTGAATTCTGTTTACTTCTTCTGGCTGTGCAAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CAA 90 bp CTTGAGAATGTAACTGCCCATAATGTGCATGCTTGCTTGGTCAAGAATGGTCTAAATGTGCATGCTTGCTaGGTCAAGAATGGTCTATGG +
Preference number: 5 (lower is better)
Translates to: LENVTAHNVHACLVKNGLNVHAC*VKNGLW
Trigger: CCATAGACCATTCTTGACCAAGCAAGCATGCACATT...TAGACCATTCTTGACCAAGCAAGCATGCACATTATGGGCAGTTACATTCTCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS-3UTR CAA 90 bp CCAGAAGAAGTAAACAGAATTCAGGTCCTTGGCCTGGAAAGGGACTATTTTATGGTTGTAAACAGGGTCTaGTCTGTGTTGTTGGTGACA +
Preference number: 5 (lower is better)
Translates to: PEEVNRIQVLGLERDYFMVVNRV*SVLLVT
Trigger: TGTCACCAACAACACAGACAAGACCCTGTTTACAAC...CATAAAATAGTCCCTTTCCAGGCCAAGGACCTGAATTCTGTTTACTTCTTCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000575847.8
CDS-3UTR CAA 90 bp CTTGAGAATGTAACTGCCCATAATGTGCATGCTTGCTTGGTCAAGAATGGTCTAGTTGTAAACAGGGTCTaGTCTGTGTTGTTGGTGACA +
Preference number: 5 (lower is better)
Translates to: LENVTAHNVHACLVKNGLVVNRV*SVLLVT
Trigger: TGTCACCAACAACACAGACAAGACCCTGTTTACAAC...TAGACCATTCTTGACCAAGCAAGCATGCACATTATGGGCAGTTACATTCTCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000575847.8
CDS-3UTR CAA 90 bp TGCAACATGCACTGTGGTTGCATTTTTAGTCATTCACTTGAGTGTGCTTTTGCAGAGGGTTGGTCTGCCTaGTACGTATGGATTTTTCCA +
Preference number: 5 (lower is better)
Translates to: CNMHCGCIFSHSLECAFAEGWSA*YVWIFP
Trigger: TGGAAAAATCCATACGTACAAGGCAGACCAACCCTC...TGCAAAAGCACACTCAAGTGAATGACTAAAAATGCAACCACAGTGCATGTTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000644049.1
CDS-3UTR CAA 90 bp GCTTTTGCACAGCCAGAAGAAGTAAACAGAATTCAGGTCCTTGGCCTGGAAAGGATAAACTTAAACCTGTaGTGTCTTGACTCAGGGTTT +
Preference number: 5 (lower is better)
Translates to: AFAQPEEVNRIQVLGLERINLNL*CLDSGF
Trigger: AAACCCTGAGTCAAGACACAACAGGTTTAAGTTTAT...CCTTTCCAGGCCAAGGACCTGAATTCTGTTTACTTCTTCTGGCTGTGCAAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644049.1
CDS-3UTR CAA 90 bp AATGTGATGCACGATTCTACTTCTTGTGGCATTGTTGAAGAACGTTTCTTTGTTTGCCACACTTCGCCGTaGATGGATTTGCAAACGCTT +
Preference number: 5 (lower is better)
Translates to: NVMHDSTSCGIVEERFFVCHTSP*MDLQTL
Trigger: AAGCGTTTGCAAATCCATCAACGGCGAAGTGTGGCA...AACAAAGAAACGTTCTTCAACAATGCCACAAGAAGTAGAATCGTGCATCACATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549155.6
CDS-3UTR CAA 90 bp TTTGTTGTGTATGATGAAGTGATGGATCCTTTGCTGGCTGAAAGGGGCAGTGTATCTGGGTGGAAGACTTaGGTTTTTCCATTAGTGATT +
Preference number: 5 (lower is better)
Translates to: FVVYDEVMDPLLAERGSVSGWKT*VFPLVI
Trigger: AATCACTAATGGAAAAACCAAAGTCTTCCACCCAGA...TACACTGCCCCTTTCAGCCAGCAAAGGATCCATCACTTCATCATACACAACAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000549155.6
CDS-3UTR CAA 90 bp TTGTTTATCGATCCTGCTCATGAACTTGTAACGGCGGGGCAGGTAATAGATTTTCCGAAACCTGCTTATTaGTTTATCGATCCTGCTCAT +
Preference number: 5 (lower is better)
Translates to: LFIDPAHELVTAGQVIDFPKPAY*FIDPAH
Trigger: ATGAGCAGGATCGATAAACAAATAAGCAGGTTTCGG...AAAATCTATTACCTGCCCCGCCGTTACAAGTTCATGAGCAGGATCGATAAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549155.6
CDS-3UTR CAA 90 bp GAGAATGTAACTGCCCATAATGTGCATGCTTGCTTGGTCAAGAATGGTCTATGGCTTCTTGTGGCATTGTaGAAGAACGTTTCTTTGTTG +
Preference number: 5 (lower is better)
Translates to: ENVTAHNVHACLVKNGLWLLVAL*KNVSLL
Trigger: CAACAAAGAAACGTTCTTCAACAATGCCACAAGAAG...CCATAGACCATTCTTGACCAAGCAAGCATGCACATTATGGGCAGTTACATTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CAA 90 bp ACTGCCCATAATGTGCATGCTTGCTTGGTCAAGAATGGTCTATGGATAGATAGCCTACTTCTTGTGGCATaGTTGAAGAACGTTTCTTTG +
Preference number: 5 (lower is better)
Translates to: TAHNVHACLVKNGLWIDSLLLVA*LKNVSL
Trigger: CAAAGAAACGTTCTTCAACAATGCCACAAGAAGTAG...GCTATCTATCCATAGACCATTCTTGACCAAGCAAGCATGCACATTATGGGCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CAA 90 bp TTTGTTGTGTATGATGAAGTGATGGATCCTTTGCTGGCTGAAAGGGGCAGTGTACTACTTCTTGTGGCATaGTTGAAGAACGTTTCTTTG +
Preference number: 5 (lower is better)
Translates to: FVVYDEVMDPLLAERGSVLLLVA*LKNVSL
Trigger: CAAAGAAACGTTCTTCAACAATGCCACAAGAAGTAG...TACACTGCCCCTTTCAGCCAGCAAAGGATCCATCACTTCATCATACACAACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549155.6
CDS-3UTR CAA 90 bp CTTGAGAATGTAACTGCCCATAATGTGCATGCTTGCTTGGTCAAGAATGGTCTATACAAGATCCAAAGGTaGGTATTTATACCACACGCC +
Preference number: 5 (lower is better)
Translates to: LENVTAHNVHACLVKNGLYKIQR*VFIPHA
Trigger: GGCGTGTGGTATAAATACCAACCTTTGGATCTTGTA...TAGACCATTCTTGACCAAGCAAGCATGCACATTATGGGCAGTTACATTCTCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CAA 90 bp GAATGTGTGTCCATGTGTCTGAATACCCTTTTTAGCCCAGTGTCTGTAAAATTCAAAAGGTGGGTTACCTaGGCATATACACAGCTGTCT +
Preference number: 5 (lower is better)
Translates to: ECVSMCLNTLFSPVSVKFKRWVT*AYTQLS
Trigger: AGACAGCTGTGTATATGCCAAGGTAACCCACCTTTT...GAATTTTACAGACACTGGGCTAAAAAGGGTATTCAGACACATGGACACACATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CAA 90 bp GGTGACATGGAATTAGGACCATATGATGACATTCTAGGAATGTGTGTCCATGTGATAATGATACAGAAGTaGATGCACACAGCAGTCCCT +
Preference number: 5 (lower is better)
Translates to: GDMELGPYDDILGMCVHVIMIQK*MHTAVP
Trigger: AGGGACTGCTGTGTGCATCAACTTCTGTATCATTAT...CACATGGACACACATTCCTAGAATGTCATCATATGGTCCTAATTCCATGTCACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392977.8
ENST00000392979.7
CDS-3UTR CAA 90 bp CCAGAAGAAGTAAACAGAATTCAGGTCCTTGGCCTGGAAAGGGACTATTTTATGCAAATTCCTATGTCTTaGGCCCTTGAAGCTAAAGGT +
Preference number: 5 (lower is better)
Translates to: PEEVNRIQVLGLERDYFMQIPMS*ALEAKG
Trigger: ACCTTTAGCTTCAAGGGCCAAAGACATAGGAATTTG...CATAAAATAGTCCCTTTCCAGGCCAAGGACCTGAATTCTGTTTACTTCTTCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CAA 90 bp GGACCATATGATGACATTCTAGGAATGTGTGTCCATGTGTCTGAATACCCTTTTGTTGTAAACAGGGTCTaGTCTGTGTTGTTGGTGACA +
Preference number: 5 (lower is better)
Translates to: GPYDDILGMCVHVSEYPFVVNRV*SVLLVT
Trigger: TGTCACCAACAACACAGACAAGACCCTGTTTACAAC...AAAAGGGTATTCAGACACATGGACACACATTCCTAGAATGTCATCATATGGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000575847.8
CDS-3UTR CAA 90 bp GAATGTGTGTCCATGTGTCTGAATACCCTTTTTAGCCCAGTGTCTGTAAAATTCGTTGTAAACAGGGTCTaGTCTGTGTTGTTGGTGACA +
Preference number: 5 (lower is better)
Translates to: ECVSMCLNTLFSPVSVKFVVNRV*SVLLVT
Trigger: TGTCACCAACAACACAGACAAGACCCTGTTTACAAC...GAATTTTACAGACACTGGGCTAAAAAGGGTATTCAGACACATGGACACACATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000570509.4
ENST00000575847.8
CDS-3UTR CAA 90 bp CCAGAAGAAGTAAACAGAATTCAGGTCCTTGGCCTGGAAAGGGACTATTTTATGTCATCAAAAAGAATATaGACATCCTTGGCCACTGGG +
Preference number: 5 (lower is better)
Translates to: PEEVNRIQVLGLERDYFMSSKRI*TSLATG
Trigger: CCCAGTGGCCAAGGATGTCAATATTCTTTTTGATGA...CATAAAATAGTCCCTTTCCAGGCCAAGGACCTGAATTCTGTTTACTTCTTCTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392979.7
CDS-3UTR CAA 90 bp AAGGTAGCAAACAGGCTGAAAAACAGGCCCAGTATACAAGTTCCCCTTGATTTTTCTGGGTGGAAGACTTaGGTTTTTCCATTAGTGATT +
Preference number: 5 (lower is better)
Translates to: KVANRLKNRPSIQVPLDFSGWKT*VFPLVI
Trigger: AATCACTAATGGAAAAACCAAAGTCTTCCACCCAGA...AAAATCAAGGGGAACTTGTATACTGGGCCTGTTTTTCAGCCTGTTTGCTACCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000392977.8
ENST00000644049.1
CDS-3UTR CAA 90 bp TTTGTTGTGTATGATGAAGTGATGGATCCTTTGCTGGCTGAAAGGGGCAGTGTAATCCTTGGCCATTTCTaGTATTGCATTAAGAATCTC +
Preference number: 5 (lower is better)
Translates to: FVVYDEVMDPLLAERGSVILGHF*YCIKNL
Trigger: GAGATTCTTAATGCAATACAAGAAATGGCCAAGGAT...TACACTGCCCCTTTCAGCCAGCAAAGGATCCATCACTTCATCATACACAACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549155.6
CDS-3UTR CAA 90 bp CCAGAAGAAGTAAACAGAATTCAGGTCCTTGGCCTGGAAAGGGACTATTTTATGCTTCTTGTGGCATTGTaGAAGAACGTTTCTTTGTTG +
Preference number: 5 (lower is better)
Translates to: PEEVNRIQVLGLERDYFMLLVAL*KNVSLL
Trigger: CAACAAAGAAACGTTCTTCAACAATGCCACAAGAAG...CATAAAATAGTCCCTTTCCAGGCCAAGGACCTGAATTCTGTTTACTTCTTCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CAA 90 bp GGACCATATGATGACATTCTAGGAATGTGTGTCCATGTGTCTGAATACCCTTTTGATGATATCTGTAGCTaGGCAGACTTCTTTACTGAC +
Preference number: 5 (lower is better)
Translates to: GPYDDILGMCVHVSEYPFDDICS*ADFFTD
Trigger: GTCAGTAAAGAAGTCTGCCAAGCTACAGATATCATC...AAAAGGGTATTCAGACACATGGACACACATTCCTAGAATGTCATCATATGGTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CAA 90 bp GGACCATATGATGACATTCTAGGAATGTGTGTCCATGTGTCTGAATACCCTTTTATAATGATACAGAAGTaGATGCACACAGCAGTCCCT +
Preference number: 5 (lower is better)
Translates to: GPYDDILGMCVHVSEYPFIMIQK*MHTAVP
Trigger: AGGGACTGCTGTGTGCATCAACTTCTGTATCATTAT...AAAAGGGTATTCAGACACATGGACACACATTCCTAGAATGTCATCATATGGTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CAA 90 bp CTTGAGAATGTAACTGCCCATAATGTGCATGCTTGCTTGGTCAAGAATGGTCTATTCAGGTCCATGTTCTaGTCGTACTTTTCTTCTAGT +
Preference number: 5 (lower is better)
Translates to: LENVTAHNVHACLVKNGLFRSMF*SYFSSS
Trigger: ACTAGAAGAAAAGTACGACAAGAACATGGACCTGAA...TAGACCATTCTTGACCAAGCAAGCATGCACATTATGGGCAGTTACATTCTCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CAA 90 bp TTTGTTGTGTATGATGAAGTGATGGATCCTTTGCTGGCTGAAAGGGGCAGTGTAATAAACTTAAACCTGTaGTGTCTTGACTCAGGGTTT +
Preference number: 5 (lower is better)
Translates to: FVVYDEVMDPLLAERGSVINLNL*CLDSGF
Trigger: AAACCCTGAGTCAAGACACAACAGGTTTAAGTTTAT...TACACTGCCCCTTTCAGCCAGCAAAGGATCCATCACTTCATCATACACAACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549155.6
CDS GCA 90 bp TATTCCAGATGCAGAAACGATAAGTCTGCTGCATTTATCTGTAAATaGTTGATAAGGTTCTGGCTTTCCAGAAATTGGATTCATCCGCTC +
Preference number: 5 (lower is better)
Translates to: YSRCRNDKSAAFICK*LIRFWLSRNWIHPL
Trigger: GAGCGGATGAATCCAATTTCTGGAAAGCCAGAACCTTATCAAGCATTTACAGATAAATGCAGCAGACTTATCGTTTCTGCATCTGGAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS GCA 90 bp ATGAAATTATTCCAGGTCTGCTTTAGCACCATTATAATACCCATTTaGATACACAGATCAATAAGGCATCCACTAGGGTGGCACTCTTCT +
Preference number: 5 (lower is better)
Translates to: MKLFQVCFSTIIIPI*IHRSIRHPLGWHSS
Trigger: AGAAGAGTGCCACCCTAGTGGATGCCTTATTGATCTGTGTATGCAAATGGGTATTATAATGGTGCTAAAGCAGACCTGGAATAATTTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000550015.1
ENST00000644049.1
CDS-3UTR CAA 90 bp CCAGAAGAAGTAAACAGAATTCAGGTCCTTGGCCTGGAAAGGGACTATTTTATGAGAATATTGACATCCTaGGCCATTTCTTGTATTGCA +
Preference number: 5 (lower is better)
Translates to: PEEVNRIQVLGLERDYFMRILTS*AISCIA
Trigger: TGCAATACAAGAAATGGCCAAGGATGTCAATATTCT...CATAAAATAGTCCCTTTCCAGGCCAAGGACCTGAATTCTGTTTACTTCTTCTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392977.8
ENST00000644049.1
CDS-3UTR CAA 90 bp TGCAACATGCACTGTGGTTGCATTTTTAGTCATTCACTTGAGTGTGCTTTTGCACTTCTTGTGGCATTGTaGAAGAACGTTTCTTTGTTG +
Preference number: 5 (lower is better)
Translates to: CNMHCGCIFSHSLECAFALLVAL*KNVSLL
Trigger: CAACAAAGAAACGTTCTTCAACAATGCCACAAGAAG...TGCAAAAGCACACTCAAGTGAATGACTAAAAATGCAACCACAGTGCATGTTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CAA 90 bp CTTGAGAATGTAACTGCCCATAATGTGCATGCTTGCTTGGTCAAGAATGGTCTATTTATCTGTAAATGCTaGATAAGGTTCTGGCTTTCC +
Preference number: 5 (lower is better)
Translates to: LENVTAHNVHACLVKNGLFICKC*IRFWLS
Trigger: GGAAAGCCAGAACCTTATCAAGCATTTACAGATAAA...TAGACCATTCTTGACCAAGCAAGCATGCACATTATGGGCAGTTACATTCTCAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CAA 90 bp GGTTGCATTTTTAGTCATTCACTTGAGTGTGCTTTTGCACAGCCAGAAGAAGTATTCAGGTCCATGTTCTaGTCGTACTTTTCTTCTAGT +
Preference number: 5 (lower is better)
Translates to: GCIFSHSLECAFAQPEEVFRSMF*SYFSSS
Trigger: ACTAGAAGAAAAGTACGACAAGAACATGGACCTGAA...TACTTCTTCTGGCTGTGCAAAAGCACACTCAAGTGAATGACTAAAAATGCAACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS-3UTR CAA 90 bp TGCAACATGCACTGTGGTTGCATTTTTAGTCATTCACTTGAGTGTGCTTTTGCAACTGGGTGGAAGACTTaGGTTTTTCCATTAGTGATT +
Preference number: 5 (lower is better)
Translates to: CNMHCGCIFSHSLECAFATGWKT*VFPLVI
Trigger: AATCACTAATGGAAAAACCAAAGTCTTCCACCCAGT...TGCAAAAGCACACTCAAGTGAATGACTAAAAATGCAACCACAGTGCATGTTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000392979.7
CDS GCA 90 bp ACATTCATTTGTTCTGCATATCTTCCAAGGACTTCCCATGGGGCATaGAACTTCACAAAGATAATGTCACTATTTATTAGAGAGGACTCT +
Preference number: 5 (lower is better)
Translates to: TFICSAYLPRTSHGA*NFTKIMSLFIREDS
Trigger: AGAGTCCTCTCTAATAAATAGTGACATTATCTTTGTGAAGTTGCATGCCCCATGGGAAGTCCTTGGAAGATATGCAGAACAAATGAATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000549155.6
ENST00000644049.1
CDS GCA 90 bp GTAATAGATTTTTCTCCTGAAAGGCATTCTTACATTCATTTGTTCTaGATATCTTCCAAGGACTTCCCATGGGGCATGCAACTTCACAAA +
Preference number: 5 (lower is better)
Translates to: VIDFSPERHSYIHLF*ISSKDFPWGMQLHK
Trigger: TTTGTGAAGTTGCATGCCCCATGGGAAGTCCTTGGAAGATATGCAGAACAAATGAATGTAAGAATGCCTTTCAGGAGAAAAATCTATTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS CCA 90 bp TATATGAAGAATGTCAGAAAAGTTCAACTAAAGCCAGGAATGAGCTaGAGCCATAAAAATAGAAAGAGTCAACAGAAGGAGAAGGGATCC +
Preference number: 5 (lower is better)
Translates to: YMKNVRKVQLKPGMS*SHKNRKSQQKEKGS
Trigger: GGATCCCTTCTCCTTCTGTTGACTCTTTCTATTTTTATGGCTCCAGCTCATTCCTGGCTTTAGTTGAACTTTTCTGACATTCTTCATATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546991.1
CDS-3UTR CAA 90 bp GGTTGCATTTTTAGTCATTCACTTGAGTGTGCTTTTGCACAGCCAGAAGAAGTATTTATCTGTAAATGCTaGATAAGGTTCTGGCTTTCC +
Preference number: 5 (lower is better)
Translates to: GCIFSHSLECAFAQPEEVFICKC*IRFWLS
Trigger: GGAAAGCCAGAACCTTATCAAGCATTTACAGATAAA...TACTTCTTCTGGCTGTGCAAAAGCACACTCAAGTGAATGACTAAAAATGCAACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS TCA 90 bp TTCCTATGTCTTTGGCCCTTGAAGCTAAAGGTCTCCTCCACTGTGTaGCAAATTTGTAAGCATCAAGTCGAATTTCAATTATGTTATTCA +
Preference number: 5 (lower is better)
Translates to: FLCLWPLKLKVSSTV*QICKHQVEFQLCYS
Trigger: TGAATAACATAATTGAAATTCGACTTGATGCTTACAAATTTGTCACACAGTGGAGGAGACCTTTAGCTTCAAGGGCCAAAGACATAGGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000550015.1
ENST00000644049.1
CDS CCA 90 bp AACGATAAGTCTGCTGCATTTATCTGTAAATGCTTGATAAGGTTCTaGCTTTCCAGAAATTGGATTCATCCGCTCTTTCTTGGAATACTT +
Preference number: 5 (lower is better)
Translates to: NDKSAAFICKCLIRF*LSRNWIHPLFLGIL
Trigger: AAGTATTCCAAGAAAGAGCGGATGAATCCAATTTCTGGAAAGCCAGAACCTTATCAAGCATTTACAGATAAATGCAGCAGACTTATCGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS TCA 72 bp TTATTGACCTTCTGCCTGGTGGGAGTGAGGAATGCCTaGCCACAGGCAGGCGACGACGTGACGCTGGGCGGC +
Preference number: 6 (lower is better)
Translates to: LLTFCLVGVRNA*PQAGDDVTLGG
Trigger: GCCGCCCAGCGTCACGTCGTCGCCTGCCTGTGGTCAGGCATTCCTCACTCCCACCAGGCAGAAGGTCAATAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000546991.1
ENST00000549155.6
ENST00000644049.1
CDS CCA 72 bp GGACTCTCCGGAGAGCGAGCCGGAGTGAAAGCAGCCTaGTGGATTTCACCACCGTCTCAGAGCATCACGCCC +
Preference number: 6 (lower is better)
Translates to: GLSGERAGVKAA*WISPPSQSITP
Trigger: GGGCGTGATGCTCTGAGACGGTGGTGAAATCCACCAGGCTGCTTTCACTCCGGCTCGCTCTCCGGAGAGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551148.1
CDS TCA 72 bp AGTCTGGAACAGGACTCTCCGGAGAGCGAGCCGGAGTaGAAGCAGCCTGGTGGATTTCACCACCGTCTCAGA +
Preference number: 6 (lower is better)
Translates to: SLEQDSPESEPE*KQPGGFHHRLR
Trigger: TCTGAGACGGTGGTGAAATCCACCAGGCTGCTTTCACTCCGGCTCGCTCTCCGGAGAGTCCTGTTCCAGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551148.1
CDS CCA 72 bp GGTGTGGCCTGGTCAGTCTTGCGGGTGAAGGATCGGTaGTACACAGGGATGCCTGCATCTTTGGAGACGAAG +
Preference number: 6 (lower is better)
Translates to: GVAWSVLRVKDR*YTGMPASLETK
Trigger: CTTCGTCTCCAAAGATGCAGGCATCCCTGTGTACCACCGATCCTTCACCCGCAAGACTGACCAGGCCACACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549155.6
ENST00000644049.1
CDS TCA 72 bp AGTGCCTTGGTGTCTTCGGCAGAAAGAAATCCACTGTaGACCTCCAGGCTCCAGTCGGGAGGAGGCCAGCAA +
Preference number: 6 (lower is better)
Translates to: SALVSSAERNPL*TSRLQSGGGQQ
Trigger: TTGCTGGCCTCCTCCCGACTGGAGCCTGGAGGTTCACAGTGGATTTCTTTCTGCCGAAGACACCAAGGCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000546991.1
ENST00000551148.1
CDS TCA 72 bp GACAGGACAAAGGTGTGGCCTGGTCAGTCTTGCGGGTaGAGGATCGGTGGTACACAGGGATGCCTGCATCTT +
Preference number: 6 (lower is better)
Translates to: DRTKVWPGQSCG*RIGGTQGCLHL
Trigger: AAGATGCAGGCATCCCTGTGTACCACCGATCCTTCACCCGCAAGACTGACCAGGCCACACCTTTGTCCTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549155.6
ENST00000644049.1
CDS GCA 72 bp ATTTTTATTGACCTTCTGCCTGGTGGGAGTGAGGAATaGCTGACCACAGGCAGGCGACGACGTGACGCTGGG +
Preference number: 6 (lower is better)
Translates to: IFIDLLPGGSEE*LTTGRRRRDAG
Trigger: CCCAGCGTCACGTCGTCGCCTGCCTGTGGTCAGGCATTCCTCACTCCCACCAGGCAGAAGGTCAATAAAAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000546991.1
ENST00000549155.6
ENST00000644049.1
CDS TCA 72 bp ATGCCAAAACTGCAGTGTGTAGCCATAGGGCACCAGTaGATGAGGCGGGTCACGGTAGTCCCGGTATCTGCA +
Preference number: 6 (lower is better)
Translates to: MPKLQCVAIGHQ*MRRVTVVPVSA
Trigger: TGCAGATACCGGGACTACCGTGACCCGCCTCATTCACTGGTGCCCTATGGCTACACACTGCAGTTTTGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000550015.1
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS CCA 72 bp AGGGTTGGTCTGCCTTGTACGTATGGATTTTTCCAGTaGGTAAGCCCAATTGCCACAGGCCCCGCAACGTCA +
Preference number: 6 (lower is better)
Translates to: RVGLPCTYGFFQ*VSPIATGPATS
Trigger: TGACGTTGCGGGGCCTGTGGCAATTGGGCTTACCCACTGGAAAAATCCATACGTACAAGGCAGACCAACCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000549155.6
ENST00000644049.1
CDS TCA 72 bp TGTCTCTCCCCCGGCTTCCAATCTGCTGGCATCATCTaGAGTACTAGTCAGGTTTCCAGGGTGAAGAAGAGA +
Preference number: 6 (lower is better)
Translates to: CLSPGFQSAGII*STSQVSRVKKR
Trigger: TCTCTTCTTCACCCTGGAAACCTGACTAGTACTTCAGATGATGCCAGCAGATTGGAAGCCGGGGGAGAGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000549155.6
ENST00000644049.1
CDS GCA 72 bp GCCAACCATGCACTTTTGCCCAGCTTCTCCTTGGCCTaGACAAGGTCCATACTTATAAGCATACACCAAGCG +
Preference number: 6 (lower is better)
Translates to: ANHALLPSFSLA*TRSILISIHQA
Trigger: CGCTTGGTGTATGCTTATAAGTATGGACCTTGTGCAGGCCAAGGAGAAGCTGGGCAAAAGTGCATGGTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000550015.1
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS GCA 72 bp GATCTGGCTGACACAACTGTAGTAGCTGCCCGTCGTTaGAGAGGAAAGGTTATAACTTCCGCTGCTCACATC +
Preference number: 6 (lower is better)
Translates to: DLADTTVVAARR*RGKVITSAAHI
Trigger: GATGTGAGCAGCGGAAGTTATAACCTTTCCTCTGCAACGACGGGCAGCTACTACAGTTGTGTCAGCCAGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549155.6
ENST00000644049.1
CDS CCA 72 bp TTCTCTCCAAAGTACCGCCTTACAAGATCCAAAGGTTaGTATTTATACCACACGCCCCAGGAGGCCCAGCAC +
Preference number: 6 (lower is better)
Translates to: FSPKYRLTRSKG*YLYHTPQEAQH
Trigger: GTGCTGGGCCTCCTGGGGCGTGTGGTATAAATACCAACCTTTGGATCTTGTAAGGCGGTACTTTGGAGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000549234.1
ENST00000644049.1
CDS CAA 72 bp CTTCTCTCCAAAGTACCGCCTTACAAGATCCAAAGGTaGGTATTTATACCACACGCCCCAGGAGGCCCAGCA +
Preference number: 6 (lower is better)
Translates to: LLSKVPPYKIQR*VFIPHAPGGPA
Trigger: TGCTGGGCCTCCTGGGGCGTGTGGTATAAATACCAACCTTTGGATCTTGTAAGGCGGTACTTTGGAGAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000549234.1
ENST00000644049.1
CDS CAA 72 bp CTTTGGAGACGAAGAGAGGCAGATCTGATGGGAGGGTaGGTCTGCCTTGTACGTATGGATTTTTCCAGTGGG +
Preference number: 6 (lower is better)
Translates to: LWRRREADLMGG*VCLVRMDFSSG
Trigger: CCCACTGGAAAAATCCATACGTACAAGGCAGACCAACCCTCCCATCAGATCTGCCTCTCTTCGTCTCCAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000549155.6
ENST00000644049.1
CDS TCA 72 bp AAGAAGCCTGTATCCTGGAGGCCTTCCTTGAGCTGCTaGACTAGTCCTGAATTGTCTTCCTCCAGGTTTCCA +
Preference number: 6 (lower is better)
Translates to: KKPVSWRPSLSC*TSPELSSSRFP
Trigger: TGGAAACCTGGAGGAAGACAATTCAGGACTAGTTCAGCAGCTCAAGGAAGGCCTCCAGGATACAGGCTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551148.1
CDS CAA 72 bp AAACCAAAGGTCATGTTTATGAGGCACAGCCTAGCTTaGAACCCAGACAGCCTGGCCAGCAATACTGCTCTC +
Preference number: 6 (lower is better)
Translates to: KPKVMFMRHSLA*NPDSLASNTAL
Trigger: GAGAGCAGTATTGCTGGCCAGGCTGTCTGGGTTCAAAGCTAGGCTGTGCCTCATAAACATGACCTTTGGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546991.1
CDS GCA 72 bp TTGTACGTATGGATTTTTCCAGTGGGTAAGCCCAATTaGCACAGGCCCCGCAACGTCATAACCTATGGTGAT +
Preference number: 6 (lower is better)
Translates to: LYVWIFPVGKPN*HRPRNVITYGD
Trigger: ATCACCATAGGTTATGACGTTGCGGGGCCTGTGGCAATTGGGCTTACCCACTGGAAAAATCCATACGTACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000549155.6
ENST00000644049.1
CDS CAA 72 bp CACATAGCCAACCATGCACTTTTGCCCAGCTTCTCCTaGGCCTGCACAAGGTCCATACTTATAAGCATACAC +
Preference number: 6 (lower is better)
Translates to: HIANHALLPSFS*ACTRSILISIH
Trigger: GTGTATGCTTATAAGTATGGACCTTGTGCAGGCCAAGGAGAAGCTGGGCAAAAGTGCATGGTTGGCTATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000550015.1
ENST00000570509.4
ENST00000573650.8
ENST00000575847.8
ENST00000644049.1
CDS TCA 72 bp AAGTTGATGCACACAGCAGTCCCTGTGGTTGCAACCTaGGAGTTATTCCTGATTAACGCCCACTTAAAGGCA +
Preference number: 6 (lower is better)
Translates to: KLMHTAVPVVAT*ELFLINAHLKA
Trigger: TGCCTTTAAGTGGGCGTTAATCAGGAATAACTCTCAGGTTGCAACCACAGGGACTGCTGTGTGCATCAACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000548940.1
ENST00000550015.1
ENST00000644049.1
CDS CAA 72 bp CCTTGCAAATCCACACCTCCTTCTGGGTGGAAGACTTaGGTTTTTCCATTAGTGATTCCAGAAGAGCTTGCC +
Preference number: 6 (lower is better)
Translates to: PCKSTPPSGWKT*VFPLVIPEELA
Trigger: GGCAAGCTCTTCTGGAATCACTAATGGAAAAACCAAAGTCTTCCACCCAGAAGGAGGTGTGGATTTGCAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000549155.6
ENST00000644049.1
CDS CCA 72 bp GTAGATGTCGGTGGTTTTCTGCTCCATGGGTTCGAATaGAGTTTTTACTTCTATAACTTCCCTCATGCAGGG +
Preference number: 6 (lower is better)
Translates to: VDVGGFLLHGFE*SFYFYNFPHAG
Trigger: CCCTGCATGAGGGAAGTTATAGAAGTAAAAACTCCATTCGAACCCATGGAGCAGAAAACCACCGACATCTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000549234.1
ENST00000644049.1
CDS CAA 90 bp GGATGTAGTCAATTCGACACTTTCCATCTCGAAAGTAAAGTCCATTaGATTTGTTTCTTTCTGGCACTGTCTCTCCCCCGGCTTCCAATC +
Preference number: 6 (lower is better)
Translates to: GCSQFDTFHLESKVH*ICFFLALSLPRLPI
Trigger: GATTGGAAGCCGGGGGAGAGACAGTGCCAGAAAGAAACAAATCAAATGGACTTTACTTTCGAGATGGAAAGTGTCGAATTGACTACATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000549155.6
ENST00000644049.1
CDS CAA 90 bp GAGTCCATAGGCATTCATCGGCTGAAGGTTATAGTCCTTTTCCCATaGTGGGAAACTTATTTTCCTTTCAGGTCCATGTTCTTGTCGTAC +
Preference number: 6 (lower is better)
Translates to: ESIGIHRLKVIVLFP*WETYFPFRSMFLSY
Trigger: GTACGACAAGAACATGGACCTGAAAGGAAAATAAGTTTCCCACAATGGGAAAAGGACTATAACCTTCAGCCGATGAATGCCTATGGACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000550015.1
ENST00000644049.1
CDS GCA 72 bp GCAATACTGCTCTCAGCAGAAGAAGGTCCACTGGACTaGATGCTATATGAAGAATGTCAGAAAAGTTCAACT +
Preference number: 6 (lower is better)
Translates to: AILLSAEEGPLD*MLYEECQKSST
Trigger: AGTTGAACTTTTCTGACATTCTTCATATAGCATGCAGTCCAGTGGACCTTCTTCTGCTGAGAGCAGTATTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546991.1
CDS CAA 72 bp TTTATCACACACAGGACACATGATGATATCTGTAGCTaGGCAGACTTCTTTACTGACTTGGCTGTGATCCAG +
Preference number: 6 (lower is better)
Translates to: FITHRTHDDICS*ADFFTDLAVIQ
Trigger: CTGGATCACAGCCAAGTCAGTAAAGAAGTCTGCCAAGCTACAGATATCATCATGTGTCCTGTGTGTGATAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000548940.1
ENST00000644049.1
CDS CAA 90 bp TCCAGATGCAGAAACGATAAGTCTGCTGCATTTATCTGTAAATGCTaGATAAGGTTCTGGCTTTCCAGAAATTGGATTCATCCGCTCTTT +
Preference number: 6 (lower is better)
Translates to: SRCRNDKSAAFICKC*IRFWLSRNWIHPLF
Trigger: AAAGAGCGGATGAATCCAATTTCTGGAAAGCCAGAACCTTATCAAGCATTTACAGATAAATGCAGCAGACTTATCGTTTCTGCATCTGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS CCA 72 bp TGTAAATGCTTGATAAGGTTCTGGCTTTCCAGAAATTaGATTCATCCGCTCTTTCTTGGAATACTTGGCTTC +
Preference number: 6 (lower is better)
Translates to: CKCLIRFWLSRN*IHPLFLGILGF
Trigger: GAAGCCAAGTATTCCAAGAAAGAGCGGATGAATCCAATTTCTGGAAAGCCAGAACCTTATCAAGCATTTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS CCA 72 bp TCTGCTGCATTTATCTGTAAATGCTTGATAAGGTTCTaGCTTTCCAGAAATTGGATTCATCCGCTCTTTCTT +
Preference number: 6 (lower is better)
Translates to: SAAFICKCLIRF*LSRNWIHPLFL
Trigger: AAGAAAGAGCGGATGAATCCAATTTCTGGAAAGCCAGAACCTTATCAAGCATTTACAGATAAATGCAGCAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1
CDS CAA 72 bp TTGTGGGAAACTTATTTTCCTTTCAGGTCCATGTTCTaGTCGTACTTTTCTTCTAGTCCACCAATTCTGAAT +
Preference number: 6 (lower is better)
Translates to: LWETYFPFRSMF*SYFSSSPPILN
Trigger: ATTCAGAATTGGTGGACTAGAAGAAAAGTACGACAAGAACATGGACCTGAAAGGAAAATAAGTTTCCCACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000550015.1
ENST00000644049.1
CDS CAA 72 bp AGAAACGATAAGTCTGCTGCATTTATCTGTAAATGCTaGATAAGGTTCTGGCTTTCCAGAAATTGGATTCAT +
Preference number: 6 (lower is better)
Translates to: RNDKSAAFICKC*IRFWLSRNWIH
Trigger: ATGAATCCAATTTCTGGAAAGCCAGAACCTTATCAAGCATTTACAGATAAATGCAGCAGACTTATCGTTTCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392977.8
ENST00000392979.7
ENST00000644049.1