RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ANKRD17 (Homo sapiens)

Ensembl gene IDs: ENSG00000132466

Ensembl transcript IDs: ENST00000330838.10, ENST00000358602.9, ENST00000509867.6, ENST00000510127.1, ENST00000513908.1, ENST00000514252.1, ENST00000558247.5, ENST00000559367.1, ENST00000560507.1, ENST00000561029.1, ENST00000639793.1

Found 1039 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CCA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGATGATGATGGGGAATaGGCAGTCACAAATGTTCAC +
Preference number: 2 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEEDDDGE*AVTNVH
Trigger: GTGAACATTTGTGACTGCCCATTCCCCATCATCATC...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
3UTR-3UTR CCA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGGATGATGATGGGGAATaGGCAGTCACAAATGTTCAC +
Preference number: 2 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKDDDGE*AVTNVH
Trigger: GTGAACATTTGTGACTGCCCATTCCCCATCATCATC...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
3UTR-3UTR TCA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGTTTTTCGGCCACTTGTaGTTTCCTCCAAATGAAAAG +
Preference number: 2 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEEFFGHL*FPPNEK
Trigger: CTTTTCATTTGGAGGAAATCACAAGTGGCCGAAAAA...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
3UTR-3UTR TCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCATTTTTCGGCCACTTGTaGTTTCCTCCAAATGAAAAG +
Preference number: 2 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSFFGHL*FPPNEK
Trigger: CTTTTCATTTGGAGGAAATCACAAGTGGCCGAAAAA...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
3UTR-3UTR TCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCTTTTTCGGCCACTTGTaGTTTCCTCCAAATGAAAAG +
Preference number: 2 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFFFGHL*FPPNEK
Trigger: CTTTTCATTTGGAGGAAATCACAAGTGGCCGAAAAA...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
3UTR-3UTR GCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAAGTTAGTAAGATCTTCTaGAAAAAGCCTACACACTTC +
Preference number: 2 (lower is better)
Translates to: QRTASTESYVQRGRGKEKVSKIF*KKPTHF
Trigger: GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAAC...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
3UTR GCA 72 bp ATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTaGAAAAAGCCTACACACTTCAGTCAAGCACATCAG +
Preference number: 3 (lower is better)
Translates to: MFTENRSVSKIF*KKPTHFSQAHQ
Trigger: CTGATGTGCTTGACTGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
3UTR TCA 72 bp AGACTTCTAAAACCATGGTATTGTACTAAACAAGCCTaGTCCCCAAGACTAAATACGGAGCATTTCAATCTA +
Preference number: 3 (lower is better)
Translates to: RLLKPWYCTKQA*SPRLNTEHFNL
Trigger: TAGATTGAAATGCTCCGTATTTAGTCTTGGGGATCAGGCTTGTTTAGTACAATACCATGGTTTTAGAAGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358602.9
3UTR GCA 72 bp GATCAAGTTTACATAATTTTGCTAAATTTCCGTGTTTaGTCAGAAGCAGTTTACAGTACTAAAACCAACCAG +
Preference number: 3 (lower is better)
Translates to: DQVYIILLNFRV*SEAVYSTKTNQ
Trigger: CTGGTTGGTTTTAGTACTGTAAACTGCTTCTGAGCAAACACGGAAATTTAGCAAAATTATGTAAACTTGATC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp ATACGGAGCATTTCAATCTATATCCCCTGGCCCCACAGGTTTGAAGTCAAGAAACGACACAGCAATCGGTaGCGCCTCCGCCGCCACCGC +
Preference number: 4 (lower is better)
Translates to: IRSISIYIPWPHRFEVKKRHSNR*RLRRHR
Trigger: GCGGTGGCGGCGGAGGCGGCACCGATTGCTGTGTCG...TTTCTTGACTTCAAACCTGTGGGGCCAGGGGATATAGATTGAAATGCTCCGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358602.9
CDS-3UTR CCA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGGACGGGGGAGGGGCGTaGGGCTACGCTCTACCGCGA +
Preference number: 4 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKDGGGA*GYALPR
Trigger: TCGCGGTAGAGCGTAGCCCCACGCCCCTCCCCCGTC...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000330838.10
ENST00000358602.9
CDS-3UTR GCA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGGCTCCCTTCTCCTTCTaGAGCCGTCGCCGCCGCCAC +
Preference number: 4 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKAPFSF*SRRRRH
Trigger: GTGGCGGCGGCGACGGCTGCAGAAGGAGAAGGGAGC...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330838.10
ENST00000358602.9
CDS-3UTR GCA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGTTAGCAGCTGCGGGTaGTCCTCCAAGGGGTGCCCC +
Preference number: 4 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEEVSSCG*SSKGCP
Trigger: GGGGCACCCCTTGGAGGAGCACCCGCAGCTGCTAAC...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCGACGGGGGAGGGGCGTaGGGCTACGCTCTACCGCGA +
Preference number: 4 (lower is better)
Translates to: MGNGQSQMFTENRSVSKIDGGGA*GYALPR
Trigger: TCGCGGTAGAGCGTAGCCCCACGCCCCTCCCCCGTC...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000330838.10
ENST00000358602.9
CDS-3UTR TCA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGTCCACCACTGCCAGATaGCCCCCTGCACAAGCCAGG +
Preference number: 4 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEESTTAR*PPAQAR
Trigger: CCTGGCTTGTGCAGGGGGTCATCTGGCAGTGGTGGA...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGCGCTTGGCCTTGTGGTaGTGCTGCTGCGGCGGCTTC +
Preference number: 4 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKRLALW*CCCGGF
Trigger: GAAGCCGCCGCAGCAGCAGCACCACAAGGCCAAGCG...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330838.10
ENST00000358602.9
CDS-3UTR GCA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGGTTAGCAGCTGCGGGTaGTCCTCCAAGGGGTGCCCC +
Preference number: 4 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKVSSCG*SSKGCP
Trigger: GGGGCACCCCTTGGAGGAGCACCCGCAGCTGCTAAC...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp ATACGGAGCATTTCAATCTATATCCCCTGGCCCCACAGGTTTGAAGTCAAGAAATCCTTGCCCCAGCCCTaGCAACTGTGCTTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: IRSISIYIPWPHRFEVKKSLPQP*QLCLAQ
Trigger: CTGGGCCAAGCACAGTTGGCAGGGCTGGGGCAAGGA...TTTCTTGACTTCAAACCTGTGGGGCCAGGGGATATAGATTGAAATGCTCCGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358602.9
CDS-3UTR CCA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGTTACGCTTGGCCTTGTaGTGCTGCTGCTGCGGCGGC +
Preference number: 4 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEELRLAL*CCCCGG
Trigger: GCCGCCGCAGCAGCAGCACCACAAGGCCAAGCGTAA...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330838.10
ENST00000358602.9
CDS-3UTR GCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCACGACACAGCAATCGGTaGCGCCTCCGCCGCCACCGC +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSRHSNR*RLRRHR
Trigger: GCGGTGGCGGCGGAGGCGGCACCGATTGCTGTGTCG...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330838.10
ENST00000358602.9
CDS-3UTR GCA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGCCTTGTGGTGCTGCTaGTGCGGCGGCTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEEALWCC*CGGFFF
Trigger: GAAGAAGAAGCCGCCGCAGCAGCAGCACCACAAGGC...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330838.10
ENST00000358602.9
CDS-3UTR GCA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCCGCTTGGCCTTGTGGTaGTGCTGCTGCGGCGGCTTC +
Preference number: 4 (lower is better)
Translates to: MGNGQSQMFTENRSVSKIRLALW*CCCGGF
Trigger: GAAGCCGCCGCAGCAGCAGCACCACAAGGCCAAGCG...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330838.10
ENST00000358602.9
CDS-3UTR GCA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGTGCTCCTCCAAGGGGTaGCCCAGGTCCGTACATCTG +
Preference number: 4 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEECSSKG*PRSVHL
Trigger: CAGATGTACGGACCTGGGGCACCCCTTGGAGGAGCA...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGCAGCCCTGCCAACTGTaGTTGGCCCAGTACTGGCTG +
Preference number: 4 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEEQPCQL*LAQYWL
Trigger: CAGCCAGTACTGGGCCAAGCACAGTTGGCAGGGCTG...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGAAACCCCTCCTGGCTaGGCTGGTGGTGATGGGGAA +
Preference number: 4 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEEETPPG*AGGDGE
Trigger: TTCCCCATCACCACCAGCCCAGCCAGGAGGGGTTTC...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp ATACGGAGCATTTCAATCTATATCCCCTGGCCCCACAGGTTTGAAGTCAAGAAAATTTGCGATGGACCCTaGAGGCAAGGGACCTGCCGC +
Preference number: 4 (lower is better)
Translates to: IRSISIYIPWPHRFEVKKICDGP*RQGTCR
Trigger: GCGGCAGGTCCCTTGCCTCCAGGGTCCATCGCAAAT...TTTCTTGACTTCAAACCTGTGGGGCCAGGGGATATAGATTGAAATGCTCCGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358602.9
CDS-3UTR CCA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGATTTGCGATGGACCCTaGAGGCAAGGGACCTGCCGC +
Preference number: 4 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEEICDGP*RQGTCR
Trigger: GCGGCAGGTCCCTTGCCTCCAGGGTCCATCGCAAAT...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTCCACCACTGCCAGATaGCCCCCTGCACAAGCCAGG +
Preference number: 4 (lower is better)
Translates to: MGNGQSQMFTENRSVSKISTTAR*PPAQAR
Trigger: CCTGGCTTGTGCAGGGGGTCATCTGGCAGTGGTGGA...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGGGAGTTAACTGAGTaGCATCTGGTGGAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEEGELTE*HLVEGL
Trigger: CAGCCCCTCCACCAGATGTCACTCAGTTAACTCCCC...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGACCATGGGCAGTGCTTaGACTGGTACACGAGGAGCC +
Preference number: 4 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEETMGSA*TGTRGA
Trigger: GGCTCCTCGTGTACCAGTTCAAGCACTGCCCATGGT...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGCAGGGCTCAAAGGCCTaGCAGGAAACGGACCCCAAG +
Preference number: 4 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKQGSKA*QETDPK
Trigger: CTTGGGGTCCGTTTCCTGTCAGGCCTTTGAGCCCTG...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGTTGTGGTGCTGCTGCTaGGGCGGCTTCTTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEELWCCC*GGFFFR
Trigger: CCTGAAGAAGAAGCCGCCGCAGCAGCAGCACCACAA...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330838.10
ENST00000358602.9
CDS-3UTR GCA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGTTGGCCTTGTGGTGCTaGTGCTGCGGCGGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKLALWC*CCGGFF
Trigger: GAAGAAGCCGCCGCAGCAGCAGCACCACAAGGCCAA...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330838.10
ENST00000358602.9
CDS-3UTR GCA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGTGCCAGATGACCCCCTaGACAAGCCAGGGACAGTAC +
Preference number: 4 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEECQMTP*TSQGQY
Trigger: GTACTGTCCCTGGCTTGTGCAGGGGGTCATCTGGCA...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGTGGGGCAGGAGATGGTaGACGAACTCCCGAGGATAC +
Preference number: 4 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEEWGRRW*TNSRGY
Trigger: GTATCCTCGGGAGTTCGTGCACCATCTCCTGCCCCA...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGTGGAGGCAAGGGACCTaGCGCCAGAGGCAAAGCTTG +
Preference number: 4 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKWRQGT*RQRQSL
Trigger: CAAGCTTTGCCTCTGGCGGCAGGTCCCTTGCCTCCA...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAACGACTTCGGCCGCACTaGGGCCGACACAGCAATCGG +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKRLRPH*GRHSNR
Trigger: CCGATTGCTGTGTCGGCCCCAGTGCGGCCGAAGTCG...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330838.10
ENST00000358602.9
CDS-3UTR CCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAACGCTGTTGTTACTGCTaGTGCCGCCGCCGCCACCTC +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKRCCYC*CRRRHL
Trigger: GAGGTGGCGGCGGCGGCACCAGCAGTAACAACAGCG...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330838.10
ENST00000358602.9
CDS-3UTR CCA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGTCAGGCTCCTGAGGTaGAACAACCATGGGCAGTGC +
Preference number: 4 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEEVRLLR*NNHGQC
Trigger: GCACTGCCCATGGTTGTTCCACCTCAGGAGCCTGAC...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGCGCCAGAGGCTGGATTaGCGCAAAACCCATCTGAGC +
Preference number: 4 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEERQRLD*RKTHLS
Trigger: GCTCAGATGGGTTTTGCGCCAATCCAGCCTCTGGCG...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGATTTGCGATGGACCCTaGAGGCAAGGGACCTGCCGC +
Preference number: 4 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKICDGP*RQGTCR
Trigger: GCGGCAGGTCCCTTGCCTCCAGGGTCCATCGCAAAT...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGGGTTTGTCAGGCTCCTaGGGTGGAACAACCATGGGC +
Preference number: 4 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKGLSGS*GGTTMG
Trigger: GCCCATGGTTGTTCCACCTCAGGAGCCTGACAAACC...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCCAGGGCTCAAAGGCCTaGCAGGAAACGGACCCCAAG +
Preference number: 4 (lower is better)
Translates to: MGNGQSQMFTENRSVSKIQGSKA*QETDPK
Trigger: CTTGGGGTCCGTTTCCTGTCAGGCCTTTGAGCCCTG...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGTGGCGAGGCACCATGTaGGGCTTAGGCGAGTTAGTA +
Preference number: 4 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEEWRGTM*GLGELV
Trigger: TACTAACTCGCCTAAGCCTCACATGGTGCCTCGCCA...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGTGGTCTTGGTTCCTaGGAAACAGATCCCGGAGGT +
Preference number: 4 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEEGGLGS*ETDPGG
Trigger: ACCTCCGGGATCTGTTTCTCAGGAACCAAGACCACC...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGCCTCCCCAGAAGGCATaGGCAGAAGTAGGGCTGTTT +
Preference number: 4 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEEPPQKA*AEVGLF
Trigger: AAACAGCCCTACTTCTGCTCATGCCTTCTGGGGAGG...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGCCGCAAGTTCCACATaGCCACCACATGCAGCCAAA +
Preference number: 4 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEEAASST*PPHAAK
Trigger: TTTGGCTGCATGTGGTGGGCATGTGGAACTTGCGGC...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGTGCCAGATGACCCCCTaGACAAGCCAGGGACAGTAC +
Preference number: 4 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKCQMTP*TSQGQY
Trigger: GTACTGTCCCTGGCTTGTGCAGGGGGTCATCTGGCA...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTGCTCCTCCAAGGGGTaGCCCAGGTCCGTACATCTG +
Preference number: 4 (lower is better)
Translates to: MGNGQSQMFTENRSVSKICSSKG*PRSVHL
Trigger: CAGATGTACGGACCTGGGGCACCCCTTGGAGGAGCA...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCGTTAGCAGCTGCGGGTaGTCCTCCAAGGGGTGCCCC +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFVSSCG*SSKGCP
Trigger: GGGGCACCCCTTGGAGGAGCACCCGCAGCTGCTAAC...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGTGGGGCAGGAGATGGTaGACGAACTCCCGAGGATAC +
Preference number: 4 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKWGRRW*TNSRGY
Trigger: GTATCCTCGGGAGTTCGTGCACCATCTCCTGCCCCA...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAATCCTTGCCCCAGCCCTaGCAACTGTGCTTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKSLPQP*QLCLAQ
Trigger: CTGGGCCAAGCACAGTTGGCAGGGCTGGGGCAAGGA...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCCGACTTCGGCCGCACTaGGGCCGACACAGCAATCGG +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFRLRPH*GRHSNR
Trigger: CCGATTGCTGTGTCGGCCCCAGTGCGGCCGAAGTCG...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330838.10
ENST00000358602.9
CDS-3UTR CCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAATGCTTTCGCTGCTGCTaGGGGGTCGGCAAGTCCGGT +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKCFRCC*GVGKSG
Trigger: ACCGGACTTGCCGACCCCCCAGCAGCAGCGAAAGCA...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000330838.10
ENST00000358602.9
CDS-3UTR CCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAATGCTTTCGCTGCTGCTaGGGGGTCGGCAAGTCCGGT +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKCFRCC*GVGKSG
Trigger: ACCGGACTTGCCGACCCCCCAGCAGCAGCGAAAGCA...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330838.10
ENST00000358602.9
CDS-3UTR CCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCACGCTGTTGTTACTGCTaGTGCCGCCGCCGCCACCTC +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSRCCYC*CRRRHL
Trigger: GAGGTGGCGGCGGCGGCACCAGCAGTAACAACAGCG...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330838.10
ENST00000358602.9
CDS-3UTR CCA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGCAACATTGGCAGGTaGTTTGTCAGGCTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEEGNIGR*FVRLLR
Trigger: CCTCAGGAGCCTGACAAACCACCTGCCAATGTTGCC...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGTGTCCCCACTCTCGCTaGTACTGCTGCTCTTGGACT +
Preference number: 4 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEECPHSR*YCCSWT
Trigger: AGTCCAAGAGCAGCAGTACCAGCGAGAGTGGGGACA...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp ATACGGAGCATTTCAATCTATATCCCCTGGCCCCACAGGTTTGAAGTCAAGAAACTCCAAAGTGGGTCATaGGCAACCTTGGTGGACGGA +
Preference number: 4 (lower is better)
Translates to: IRSISIYIPWPHRFEVKKLQSGS*ATLVDG
Trigger: TCCGTCCACCAAGGTTGCCCATGACCCACTTTGGAG...TTTCTTGACTTCAAACCTGTGGGGCCAGGGGATATAGATTGAAATGCTCCGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358602.9
CDS-3UTR CCA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGCTCCAAAGTGGGTCATaGGCAACCTTGGTGGACGGA +
Preference number: 4 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEELQSGS*ATLVDG
Trigger: TCCGTCCACCAAGGTTGCCCATGACCCACTTTGGAG...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGGGCATCGCCAGAGGCTaGATTGGCGCAAAACCCATC +
Preference number: 4 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKGIARG*IGAKPI
Trigger: GATGGGTTTTGCGCCAATCCAGCCTCTGGCGATGCC...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCTCCACCACTGCCAGATaGCCCCCTGCACAAGCCAGG +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFSTTAR*PPAQAR
Trigger: CCTGGCTTGTGCAGGGGGTCATCTGGCAGTGGTGGA...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCGGGGAGTTAACTGAGTaGCATCTGGTGGAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: MGNGQSQMFTENRSVSKIGELTE*HLVEGL
Trigger: CAGCCCCTCCACCAGATGTCACTCAGTTAACTCCCC...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCACCATGGGCAGTGCTTaGACTGGTACACGAGGAGCC +
Preference number: 4 (lower is better)
Translates to: MGNGQSQMFTENRSVSKITMGSA*TGTRGA
Trigger: GGCTCCTCGTGTACCAGTTCAAGCACTGCCCATGGT...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCGGTTTGTCAGGCTCCTaGGGTGGAACAACCATGGGC +
Preference number: 4 (lower is better)
Translates to: MGNGQSQMFTENRSVSKIGLSGS*GGTTMG
Trigger: GCCCATGGTTGTTCCACCTCAGGAGCCTGACAAACC...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGCTTGCACCAGTAACTaGACCACATCGAGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEEACTSN*TTSRCP
Trigger: TGGACACCTCGATGTGGTTCAGTTACTGGTGCAAGC...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGACCCCAAGTGGATTaGGCTGGTGGAAAAGTACCT +
Preference number: 4 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEEGPQVD*AGGKVP
Trigger: AGGTACTTTTCCACCAGCTCAATCCACTTGGGGTCC...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGTGGCGAGGCACCATGTaGGGCTTAGGCGAGTTAGTA +
Preference number: 4 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKWRGTM*GLGELV
Trigger: TACTAACTCGCCTAAGCCTCACATGGTGCCTCGCCA...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp ATACGGAGCATTTCAATCTATATCCCCTGGCCCCACAGGTTTGAAGTCAAGAAAGAACCACTGCTATTCTaGTTGCTATGGCGAGGCACC +
Preference number: 4 (lower is better)
Translates to: IRSISIYIPWPHRFEVKKEPLLF*LLWRGT
Trigger: GGTGCCTCGCCATAGCAATCAGAATAGCAGTGGTTC...TTTCTTGACTTCAAACCTGTGGGGCCAGGGGATATAGATTGAAATGCTCCGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358602.9
CDS-3UTR TCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAACATCCAGCGTGTCATTaGGGGTCTGAGCAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKHPACH*GSEQGW
Trigger: CCAGCCCTGCTCAGACCCTCAATGACACGCTGGATG...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTGTGGTGCTGCTGCTaGGGCGGCTTCTTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: MGNGQSQMFTENRSVSKILWCCC*GGFFFR
Trigger: CCTGAAGAAGAAGCCGCCGCAGCAGCAGCACCACAA...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330838.10
ENST00000358602.9
CDS-3UTR GCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAATTGGCCTTGTGGTGCTaGTGCTGCGGCGGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKLALWC*CCGGFF
Trigger: GAAGAAGCCGCCGCAGCAGCAGCACCACAAGGCCAA...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330838.10
ENST00000358602.9
CDS-3UTR GCA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGCACTCTCGCTGGTACTaGTGCTCTTGGACTCTCCAT +
Preference number: 4 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEEHSRWY*CSWTLH
Trigger: ATGGAGAGTCCAAGAGCAGCAGTACCAGCGAGAGTG...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAATGCTCCTCCAAGGGGTaGCCCAGGTCCGTACATCTG +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKCSSKG*PRSVHL
Trigger: CAGATGTACGGACCTGGGGCACCCCTTGGAGGAGCA...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTGGGGCAGGAGATGGTaGACGAACTCCCGAGGATAC +
Preference number: 4 (lower is better)
Translates to: MGNGQSQMFTENRSVSKIWGRRW*TNSRGY
Trigger: GTATCCTCGGGAGTTCGTGCACCATCTCCTGCCCCA...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGACTGTTCATGTGAGGTaGCCAGGGTCCAGTCCACAC +
Preference number: 4 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKTVHVR*PGSSPH
Trigger: GTGTGGACTGGACCCTGGGCACCTCACATGAACAGT...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAATGGAGGCAAGGGACCTaGCGCCAGAGGCAAAGCTTG +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKWRQGT*RQRQSL
Trigger: CAAGCTTTGCCTCTGGCGGCAGGTCCCTTGCCTCCA...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAACAGCCCTGCCAACTGTaGTTGGCCCAGTACTGGCTG +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKQPCQL*LAQYWL
Trigger: CAGCCAGTACTGGGCCAAGCACAGTTGGCAGGGCTG...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAACAGCCCTGCCAACTGTaGTTGGCCCAGTACTGGCTG +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKQPCQL*LAQYWL
Trigger: CAGCCAGTACTGGGCCAAGCACAGTTGGCAGGGCTG...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCTCCTTGCCCCAGCCCTaGCAACTGTGCTTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFSLPQP*QLCLAQ
Trigger: CTGGGCCAAGCACAGTTGGCAGGGCTGGGGCAAGGA...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGTCTGTCAGAATTCCTTaGCCCAGCCCTGCCAACTGT +
Preference number: 4 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEESVRIP*PSPANC
Trigger: ACAGTTGGCAGGGCTGGGGCAAGGAATTCTGACAGA...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGTGTCCCCACTCTCGCTaGTACTGCTGCTCTTGGACT +
Preference number: 4 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKCPHSR*YCCSWT
Trigger: AGTCCAAGAGCAGCAGTACCAGCGAGAGTGGGGACA...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp ATACGGAGCATTTCAATCTATATCCCCTGGCCCCACAGGTTTGAAGTCAAGAAACATGGGCAACCTTGGTaGACGGATCTGCTGGAAAGT +
Preference number: 4 (lower is better)
Translates to: IRSISIYIPWPHRFEVKKHGQPW*TDLLES
Trigger: ACTTTCCAGCAGATCCGTCCACCAAGGTTGCCCATG...TTTCTTGACTTCAAACCTGTGGGGCCAGGGGATATAGATTGAAATGCTCCGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358602.9
CDS-3UTR CCA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGGGTCATGGGCAACCTTaGTGGACGGATCTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKGHGQP*WTDLLE
Trigger: TTCCAGCAGATCCGTCCACCAAGGTTGCCCATGACC...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGCATAGGGTAAGTCACTaGGGCAGTAGAAGGCACCGC +
Preference number: 4 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKHRVSH*GSRRHR
Trigger: GCGGTGCCTTCTACTGCCCCAGTGACTTACCCTATG...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGCTGGGGGCATCCCATTaGTGTCTGAGGCATAGGGTA +
Preference number: 4 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKLGASH*CLRHRV
Trigger: TACCCTATGCCTCAGACACCAATGGGATGCCCCCAG...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGTGCTTGGCCCAGTACTaGCTGTCCAACTATCACTCC +
Preference number: 4 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEECLAQY*LSNYHS
Trigger: GGAGTGATAGTTGGACAGCCAGTACTGGGCCAAGCA...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGAGATCTGCGCCTGCCTaGAGTAAGACATCTGCTACA +
Preference number: 4 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEERSAPA*SKTSAT
Trigger: TGTAGCAGATGTCTTACTTCAGGCAGGCGCAGATCT...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGGTAGGATCTGCCCCATaGGCCAAAAGTAGTTCCACC +
Preference number: 4 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKVGSAP*AKSSST
Trigger: GGTGGAACTACTTTTGGCTCATGGGGCAGATCCTAC...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCGATGGGGGAGTTAACTaGGTGACATCTGGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: MGNGQSQMFTENRSVSKIDGGVN*VTSGGG
Trigger: CCCTCCACCAGATGTCACTCAGTTAACTCCCCCATC...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAAGGTTTGTCAGGCTCCTaGGGTGGAACAACCATGGGC +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKGLSGS*GGTTMG
Trigger: GCCCATGGTTGTTCCACCTCAGGAGCCTGACAAACC...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGTGGGTAGGAGTGTTTaGCATTGCAGATGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEEVGRSV*HCRCSS
Trigger: GGAAGAGCATCTGCAATGTCAAACACTCCTACCCAC...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGGGACCCCAAGTGGATTaGGCTGGTGGAAAAGTACCT +
Preference number: 4 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKGPQVD*AGGKVP
Trigger: AGGTACTTTTCCACCAGCTCAATCCACTTGGGGTCC...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCACAGGGCTCAAAGGCCTaGCAGGAAACGGACCCCAAG +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSQGSKA*QETDPK
Trigger: CTTGGGGTCCGTTTCCTGTCAGGCCTTTGAGCCCTG...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGGAACCACTGCTATTCTaGTTGCTATGGCGAGGCACC +
Preference number: 4 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKEPLLF*LLWRGT
Trigger: GGTGCCTCGCCATAGCAATCAGAATAGCAGTGGTTC...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCGGTGGTCTTGGTTCCTaGGAAACAGATCCCGGAGGT +
Preference number: 4 (lower is better)
Translates to: MGNGQSQMFTENRSVSKIGGLGS*ETDPGG
Trigger: ACCTCCGGGATCTGTTTCTCAGGAACCAAGACCACC...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAACTTTCCTGTCCTaGGACACATTGCTGGGCTTT +
Preference number: 4 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEEGTFLS*DTLLGF
Trigger: AAAGCCCAGCAATGTGTCTCAGGACAGGAAAGTTCC...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGACGTTCCAGTTTGCCTaGTACGTGCAGAACGTTCAG +
Preference number: 4 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEETFQFA*YVQNVQ
Trigger: CTGAACGTTCTGCACGTATCAGGCAAACTGGAACGT...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGTGCAGGCTAACAAGCTaGTCCTCATCAGCCAAGCTG +
Preference number: 4 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKCRLTS*SSSAKL
Trigger: CAGCTTGGCTGATGAGGATCAGCTTGTTAGCCTGCA...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGGTAAGTTGGTCAGCATaGGCCAGTTCCAAGGACTGC +
Preference number: 4 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKVSWSA*ASSKDC
Trigger: GCAGTCCTTGGAACTGGCTCATGCTGACCAACTTAC...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGCCTCCCTTGTTTTGTTaGGCTCCTCGATCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEEPPLFC*APRSSP
Trigger: AGGAGAAGATCGAGGAGCTCAACAAAACAAGGGAGG...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCGTGTCATTGAGGGTCTaGGCAGGGCTGGCTACCATT +
Preference number: 4 (lower is better)
Translates to: MGNGQSQMFTENRSVSKIVSLRV*AGLATI
Trigger: AATGGTAGCCAGCCCTGCTCAGACCCTCAATGACAC...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCACATCCAGCGTGTCATTaGGGGTCTGAGCAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSHPACH*GSEQGW
Trigger: CCAGCCCTGCTCAGACCCTCAATGACACGCTGGATG...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGCTCTTGATCCGCGCCTaGTTCCAAAAGAAATCGCAC +
Preference number: 4 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEELLIRA*FQKKSH
Trigger: GTGCGATTTCTTTTGGAAGCAGGCGCGGATCAAGAG...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGCAACATGGCCATCCATaGAAGCCTCCATCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKQHGHP*KPPSEQ
Trigger: CTGCTCTGATGGAGGCTTGCATGGATGGCCATGTTG...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCGCCGCAAGTTCCACATaGCCACCACATGCAGCCAAA +
Preference number: 4 (lower is better)
Translates to: MGNGQSQMFTENRSVSKIAASST*PPHAAK
Trigger: TTTGGCTGCATGTGGTGGGCATGTGGAACTTGCGGC...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAATGCCAGATGACCCCCTaGACAAGCCAGGGACAGTAC +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKCQMTP*TSQGQY
Trigger: GTACTGTCCCTGGCTTGTGCAGGGGGTCATCTGGCA...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGCCTTCTTCCCTCTTTTaGCCACGCTTAGGACTTGCT +
Preference number: 4 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEEPSSLF*PRLGLA
Trigger: AGCAAGTCCTAAGCGTGGGCAAAAGAGGGAAGAAGG...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGTGCAGGCACAGTGAGTaGTGTGGCAGTTTGAGATGT +
Preference number: 4 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEECRHSE*CGSLRC
Trigger: ACATCTCAAACTGCCACAGCACTCACTGTGCCTGCA...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp ATACGGAGCATTTCAATCTATATCCCCTGGCCCCACAGGTTTGAAGTCAAGAAATACTGGTGGACTACCTaGTTCCTGTTCGGAGGAAGA +
Preference number: 4 (lower is better)
Translates to: IRSISIYIPWPHRFEVKKYWWTT*FLFGGR
Trigger: TCTTCCTCCGAACAGGAAGCAGGTAGTCCACCAGTA...TTTCTTGACTTCAAACCTGTGGGGCCAGGGGATATAGATTGAAATGCTCCGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358602.9
CDS-3UTR GCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCATGCTCCTCCAAGGGGTaGCCCAGGTCCGTACATCTG +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSCSSKG*PRSVHL
Trigger: CAGATGTACGGACCTGGGGCACCCCTTGGAGGAGCA...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAATGGGGCAGGAGATGGTaGACGAACTCCCGAGGATAC +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKWGRRW*TNSRGY
Trigger: GTATCCTCGGGAGTTCGTGCACCATCTCCTGCCCCA...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGTCTCCCTCAGAAAGCTaGTCTCCAACTCCAACAGGA +
Preference number: 4 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEESPSES*SPTPTG
Trigger: TCCTGTTGGAGTTGGAGAGCAGCTTTCTGAGGGAGA...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCTGGAGGCAAGGGACCTaGCGCCAGAGGCAAAGCTTG +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFWRQGT*RQRQSL
Trigger: CAAGCTTTGCCTCTGGCGGCAGGTCCCTTGCCTCCA...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCAAGTCCGGTTACGCTTaGCCTTGTGGTGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: MGNGQSQMFTENRSVSKIKSGYA*PCGAAA
Trigger: AGCAGCAGCACCACAAGGCCAAGCGTAACCGGACTT...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330838.10
ENST00000358602.9
CDS-3UTR CCA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGGGGCAGTGCTTGAACTaGTACACGAGGAGCCCTATT +
Preference number: 4 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKGQCLN*YTRSPI
Trigger: AATAGGGCTCCTCGTGTACCAGTTCAAGCACTGCCC...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAAGTCAGGCTCCTGAGGTaGAACAACCATGGGCAGTGC +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKVRLLR*NNHGQC
Trigger: GCACTGCCCATGGTTGTTCCACCTCAGGAGCCTGAC...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAGTCAGGCTCCTGAGGTaGAACAACCATGGGCAGTGC +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKVRLLR*NNHGQC
Trigger: GCACTGCCCATGGTTGTTCCACCTCAGGAGCCTGAC...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCGGCAACATTGGCAGGTaGTTTGTCAGGCTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: MGNGQSQMFTENRSVSKIGNIGR*FVRLLR
Trigger: CCTCAGGAGCCTGACAAACCACCTGCCAATGTTGCC...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTGTACCAGTTCCTCGTaGCCACCAGCACAGGCAAGT +
Preference number: 4 (lower is better)
Translates to: MGNGQSQMFTENRSVSKICTSSS*PPAQAS
Trigger: ACTTGCCTGTGCTGGTGGCCACGAGGAACTGGTACA...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGCATGGGCAACCTTGGTaGACGGATCTGCTGGAAAGT +
Preference number: 4 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKHGQPW*TDLLES
Trigger: ACTTTCCAGCAGATCCGTCCACCAAGGTTGCCCATG...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCGAAACCCCTCCTGGCTaGGCTGGTGGTGATGGGGAA +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFETPPG*AGGDGE
Trigger: TTCCCCATCACCACCAGCCCAGCCAGGAGGGGTTTC...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCCATAGGGTAAGTCACTaGGGCAGTAGAAGGCACCGC +
Preference number: 4 (lower is better)
Translates to: MGNGQSQMFTENRSVSKIHRVSH*GSRRHR
Trigger: GCGGTGCCTTCTACTGCCCCAGTGACTTACCCTATG...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGTGTGCCATGAGGGGGTaGTCTAATAGCAGGGGTTTC +
Preference number: 4 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKCAMRG*SNSRGF
Trigger: GAAACCCCTGCTATTAGACCACCCCCTCATGGCACA...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGAAGGTCGAAGGTAGCTaGACAGAAGAGGGAACACTG +
Preference number: 4 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEEKVEGS*TEEGTL
Trigger: CAGTGTTCCCTCTTCTGTCCAGCTACCTTCGACCTT...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGCCTGAGACACATTGCTaGGCTTTTCTGACCCTAACG +
Preference number: 4 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEEPETHC*AFLTLT
Trigger: CGTTAGGGTCAGAAAAGCCCAGCAATGTGTCTCAGG...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGATCCTGGCTGTTTGCTaGCAAATGGCTGCTGGACTT +
Preference number: 4 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEEILAVC*QMAAGL
Trigger: AAGTCCAGCAGCCATTTGCCAGCAAACAGCCAGGAT...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAACGCCAGAGGCTGGATTaGCGCAAAACCCATCTGAGC +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKRQRLD*RKTHLS
Trigger: GCTCAGATGGGTTTTGCGCCAATCCAGCCTCTGGCG...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAGGCATCGCCAGAGGCTaGATTGGCGCAAAACCCATC +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKGIARG*IGAKPI
Trigger: GATGGGTTTTGCGCCAATCCAGCCTCTGGCGATGCC...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGGGGTCTGAGCAGGGCTaGCTACCATTAACCCTTGTT +
Preference number: 4 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKGSEQG*LPLTLV
Trigger: AACAAGGGTTAATGGTAGCCAGCCCTGCTCAGACCC...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp ATACGGAGCATTTCAATCTATATCCCCTGGCCCCACAGGTTTGAAGTCAAGAAATCTGTTTTATGCTCTTaGTCCGCGCCTGCTTCCAAA +
Preference number: 4 (lower is better)
Translates to: IRSISIYIPWPHRFEVKKSVLCS*SAPASK
Trigger: TTTGGAAGCAGGCGCGGATCAAGAGCATAAAACAGA...TTTCTTGACTTCAAACCTGTGGGGCCAGGGGATATAGATTGAAATGCTCCGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358602.9
CDS-3UTR TCA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGATCTGCGCCTGCCTaGAGTAAGACATCTGCTACA +
Preference number: 4 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKRSAPA*SKTSAT
Trigger: TGTAGCAGATGTCTTACTTCAGGCAGGCGCAGATCT...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCGTAGGATCTGCCCCATaGGCCAAAAGTAGTTCCACC +
Preference number: 4 (lower is better)
Translates to: MGNGQSQMFTENRSVSKIVGSAP*AKSSST
Trigger: GGTGGAACTACTTTTGGCTCATGGGGCAGATCCTAC...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCGGGGAGTTAACTGAGTaGCATCTGGTGGAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFGELTE*HLVEGL
Trigger: CAGCCCCTCCACCAGATGTCACTCAGTTAACTCCCC...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCAGGGGAGTTAACTGAGTaGCATCTGGTGGAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSGELTE*HLVEGL
Trigger: CAGCCCCTCCACCAGATGTCACTCAGTTAACTCCCC...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAGATGGGGGAGTTAACTaGGTGACATCTGGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKDGGVN*VTSGGG
Trigger: CCCTCCACCAGATGTCACTCAGTTAACTCCCCCATC...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCAACCATGGGCAGTGCTTaGACTGGTACACGAGGAGCC +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSTMGSA*TGTRGA
Trigger: GGCTCCTCGTGTACCAGTTCAAGCACTGCCCATGGT...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCAGGTTTGTCAGGCTCCTaGGGTGGAACAACCATGGGC +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSGLSGS*GGTTMG
Trigger: GCCCATGGTTGTTCCACCTCAGGAGCCTGACAAACC...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGGTGGGTAGGAGTGTTTaGCATTGCAGATGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKVGRSV*HCRCSS
Trigger: GGAAGAGCATCTGCAATGTCAAACACTCCTACCCAC...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp ATACGGAGCATTTCAATCTATATCCCCTGGCCCCACAGGTTTGAAGTCAAGAAAGTTAGTGCCGTGTCATaGTTACTCTCAGTCTGTGCA +
Preference number: 4 (lower is better)
Translates to: IRSISIYIPWPHRFEVKKVSAVS*LLSVCA
Trigger: TGCACAGACTGAGAGTAATCATGACACGGCACTAAC...TTTCTTGACTTCAAACCTGTGGGGCCAGGGGATATAGATTGAAATGCTCCGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358602.9
CDS-3UTR TCA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGTTAGTGCCGTGTCATaGTTACTCTCAGTCTGTGCA +
Preference number: 4 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEEVSAVS*LLSVCA
Trigger: TGCACAGACTGAGAGTAATCATGACACGGCACTAAC...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAATCCACAACACCAACATaGCCAGCTGTGGCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKSTTPT*PAVAAK
Trigger: CTTGGCTGCCACAGCTGGTCATGTTGGTGTTGTGGA...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAATCCACAACACCAACATaGCCAGCTGTGGCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKSTTPT*PAVAAK
Trigger: CTTGGCTGCCACAGCTGGTCATGTTGGTGTTGTGGA...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCCGCACCACCTTCACATaGCCCTTTCTAAATGCTGCC +
Preference number: 4 (lower is better)
Translates to: MGNGQSQMFTENRSVSKIRTTFT*PFLNAA
Trigger: GGCAGCATTTAGAAAGGGTCATGTGAAGGTGGTGCG...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGAGTGACCACAGCTGGTaGATGATTGTCACTCTTACG +
Preference number: 4 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEESDHSW*MIVTLT
Trigger: CGTAAGAGTGACAATCATTCACCAGCTGTGGTCACT...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp ATACGGAGCATTTCAATCTATATCCCCTGGCCCCACAGGTTTGAAGTCAAGAAAAGTGCTGTGGCAGTTTaGGATGTTGATGACAGAGCT +
Preference number: 4 (lower is better)
Translates to: IRSISIYIPWPHRFEVKKSAVAV*DVDDRA
Trigger: AGCTCTGTCATCAACATCTCAAACTGCCACAGCACT...TTTCTTGACTTCAAACCTGTGGGGCCAGGGGATATAGATTGAAATGCTCCGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358602.9
CDS-3UTR TCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAATGGCGAGGCACCATGTaGGGCTTAGGCGAGTTAGTA +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKWRGTM*GLGELV
Trigger: TACTAACTCGCCTAAGCCTCACATGGTGCCTCGCCA...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGCCTTCGGACAGAAGGTaGACTTGGACTGCCATTTGT +
Preference number: 4 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKPSDRR*TWTAIC
Trigger: ACAAATGGCAGTCCAAGTTCACCTTCTGTCCGAAGG...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAGGTGGTCTTGGTTCCTaGGAAACAGATCCCGGAGGT +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKGGLGS*ETDPGG
Trigger: ACCTCCGGGATCTGTTTCTCAGGAACCAAGACCACC...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAAGGTGGTCTTGGTTCCTaGGAAACAGATCCCGGAGGT +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKGGLGS*ETDPGG
Trigger: ACCTCCGGGATCTGTTTCTCAGGAACCAAGACCACC...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAACCTCCCCAGAAGGCATaGGCAGAAGTAGGGCTGTTT +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKPPQKA*AEVGLF
Trigger: AAACAGCCCTACTTCTGCTCATGCCTTCTGGGGAGG...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp ATACGGAGCATTTCAATCTATATCCCCTGGCCCCACAGGTTTGAAGTCAAGAAACATATTGACAATACCTaGGGGACTTGGAGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: IRSISIYIPWPHRFEVKKHIDNT*GTWSRS
Trigger: AGACCTGCTCCAAGTCCCTCAGGTATTGTCAATATG...TTTCTTGACTTCAAACCTGTGGGGCCAGGGGATATAGATTGAAATGCTCCGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358602.9
CDS-3UTR TCA 90 bp ATACGGAGCATTTCAATCTATATCCCCTGGCCCCACAGGTTTGAAGTCAAGAAAATGGCGAGTCCATATTaGCAATACCTGAGGGACTTG +
Preference number: 4 (lower is better)
Translates to: IRSISIYIPWPHRFEVKKMASPY*QYLRDL
Trigger: CAAGTCCCTCAGGTATTGTCAATATGGACTCGCCAT...TTTCTTGACTTCAAACCTGTGGGGCCAGGGGATATAGATTGAAATGCTCCGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358602.9
CDS-3UTR TCA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGATGGCGAGTCCATATTaGCAATACCTGAGGGACTTG +
Preference number: 4 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEEMASPY*QYLRDL
Trigger: CAAGTCCCTCAGGTATTGTCAATATGGACTCGCCAT...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGCCAGGTCCGTACATCTaGCCTCCTGAAATGTTTGAA +
Preference number: 4 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEEPGPYI*PPEMFE
Trigger: TTCAAACATTTCAGGAGGTCAGATGTACGGACCTGG...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGGAAGGGTCTGCAGCATaGGGGCCATTAAATATGGGT +
Preference number: 4 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKEGSAA*GPLNMG
Trigger: ACCCATATTTAATGGCCCTCATGCTGCAGACCCTTC...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGAAGCAGCTTTATTCCTaGTGGGAAGAGTGGTGGCAA +
Preference number: 4 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEEKQLYS*WEEWWQ
Trigger: TTGCCACCACTCTTCCCATCAGGAATAAAGCTGCTT...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAAGTGTCATTGAGGGTCTaGGCAGGGCTGGCTACCATT +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKVSLRV*AGLATI
Trigger: AATGGTAGCCAGCCCTGCTCAGACCCTCAATGACAC...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGAGCTTGTATATGCTaGCTGGGAACAGTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKRACIC*LGTVVA
Trigger: AGCCACCACTGTTCCCAGTCAGCATATACAAGCTCT...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358602.9
ENST00000558247.5
CDS-3UTR GCA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCGCCCTGCATTTGCTGTaGTTTCAGCTCTCATACGGG +
Preference number: 4 (lower is better)
Translates to: MGNGQSQMFTENRSVSKIALHLL*FQLSYG
Trigger: CCCGTATGAGAGCTGAAAGCACAGCAAATGCAGGGC...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAACTGCGGTTGTCCGACTaGCCTGCATTTGCTGTGCTT +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKLRLSD*PAFAVL
Trigger: AAGCACAGCAAATGCAGGGCAGTCGGACAACCGCAG...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAACTGCGGTTGTCCGACTaGCCTGCATTTGCTGTGCTT +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKLRLSD*PAFAVL
Trigger: AAGCACAGCAAATGCAGGGCAGTCGGACAACCGCAG...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGCTCTTGATCCGCGCCTaGTTCCAAAAGAAATCGCAC +
Preference number: 4 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKLLIRA*FQKKSH
Trigger: GTGCGATTTCTTTTGGAAGCAGGCGCGGATCAAGAG...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAGCCGCAAGTTCCACATaGCCACCACATGCAGCCAAA +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKAASST*PPHAAK
Trigger: TTTGGCTGCATGTGGTGGGCATGTGGAACTTGCGGC...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGCCCTGTTGCTGTTGTTaGATGAACGTTAGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKPCCCC*MNVSSC
Trigger: GCAGGAGCTAACGTTCATGCAACAACAGCAACAGGG...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCATGCCAGATGACCCCCTaGACAAGCCAGGGACAGTAC +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSCQMTP*TSQGQY
Trigger: GTACTGTCCCTGGCTTGTGCAGGGGGTCATCTGGCA...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAACAACCATGGGCAGTaGTTGAACTGGTACACGAGG +
Preference number: 4 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKNNHGQ*LNWYTR
Trigger: CCTCGTGTACCAGTTCAAGCACTGCCCATGGTTGTT...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGAGGTTGGGAAATGGATaGAGCAATACTGTGGGTAGG +
Preference number: 4 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEERLGNG*SNTVGR
Trigger: CCTACCCACAGTATTGCTGCATCCATTTCCCAACCT...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGCTGGCGTTTTTGTTTaGTTCAGCAGCCTGTCTATC +
Preference number: 4 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEEAGVFV*FSSLSI
Trigger: GATAGACAGGCTGCTGAAGCAAACAAAAACGCCAGC...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGTCTCGCTGGTACTGCTaGTCTTGGACTCTCCATTCA +
Preference number: 4 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKSRWYC*SWTLHS
Trigger: TGAATGGAGAGTCCAAGAGCAGCAGTACCAGCGAGA...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCCACTCTCGCTGGTACTaGTGCTCTTGGACTCTCCAT +
Preference number: 4 (lower is better)
Translates to: MGNGQSQMFTENRSVSKIHSRWY*CSWTLH
Trigger: ATGGAGAGTCCAAGAGCAGCAGTACCAGCGAGAGTG...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGCCTTCTTCCCTCTTTTaGCCACGCTTAGGACTTGCT +
Preference number: 4 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKPSSLF*PRLGLA
Trigger: AGCAAGTCCTAAGCGTGGGCAAAAGAGGGAAGAAGG...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGCACTGCTATTCTGATTaGTATGGCGAGGCACCATGT +
Preference number: 4 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEEHCYSD*YGEAPC
Trigger: ACATGGTGCCTCGCCATAGCAATCAGAATAGCAGTG...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGACCATCAGGGATAGGTaGTACTGGAGGAATCATTGC +
Preference number: 4 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEETIRDR*YWRNHC
Trigger: GCAATGATTCCTCCAGTAGCACCTATCCCTGATGGT...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAAACTGTTCATGTGAGGTaGCCAGGGTCCAGTCCACAC +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKTVHVR*PGSSPH
Trigger: GTGTGGACTGGACCCTGGGCACCTCACATGAACAGT...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGTCTTCCACTGACTGCTaGCATGATGTCATCCAGCGT +
Preference number: 4 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKSSTDC*HDVIQR
Trigger: ACGCTGGATGACATCATGGCAGCAGTCAGTGGAAGA...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358602.9
ENST00000509867.6
CDS-3UTR CCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGTCCGGTTACGCTTaGCCTTGTGGTGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKKSGYA*PCGAAA
Trigger: AGCAGCAGCACCACAAGGCCAAGCGTAACCGGACTT...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330838.10
ENST00000358602.9
CDS-3UTR CCA 90 bp ATACGGAGCATTTCAATCTATATCCCCTGGCCCCACAGGTTTGAAGTCAAGAAATCTAGCCTGTGTTTCTaGATCTACTGTCCTGAGGTC +
Preference number: 4 (lower is better)
Translates to: IRSISIYIPWPHRFEVKKSSLCF*IYCPEV
Trigger: GACCTCAGGACAGTAGATCCAGAAACACAGGCTAGA...TTTCTTGACTTCAAACCTGTGGGGCCAGGGGATATAGATTGAAATGCTCCGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358602.9
CDS-3UTR CCA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGTCTAGCCTGTGTTTCTaGATCTACTGTCCTGAGGTC +
Preference number: 4 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEESSLCF*IYCPEV
Trigger: GACCTCAGGACAGTAGATCCAGAAACACAGGCTAGA...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGCTAGCTACTTCAACATaGCCATCCATGCAAGCCTCC +
Preference number: 4 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKLATST*PSMQAS
Trigger: GGAGGCTTGCATGGATGGCCATGTTGAAGTAGCTAG...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGGAGGTGGAACAACCATaGGCAGTGCTTGAACTGGTA +
Preference number: 4 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKEVEQP*AVLELV
Trigger: TACCAGTTCAAGCACTGCCCATGGTTGTTCCACCTC...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCAGTCAGGCTCCTGAGGTaGAACAACCATGGGCAGTGC +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSVRLLR*NNHGQC
Trigger: GCACTGCCCATGGTTGTTCCACCTCAGGAGCCTGAC...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp ATACGGAGCATTTCAATCTATATCCCCTGGCCCCACAGGTTTGAAGTCAAGAAATCTGAGGTTGGGAAATaGATGCAGCAATACTGTGGG +
Preference number: 4 (lower is better)
Translates to: IRSISIYIPWPHRFEVKKSEVGK*MQQYCG
Trigger: CCCACAGTATTGCTGCATCCATTTCCCAACCTCAGA...TTTCTTGACTTCAAACCTGTGGGGCCAGGGGATATAGATTGAAATGCTCCGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358602.9
CDS-3UTR CCA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGTCTGAGGTTGGGAAATaGATGCAGCAATACTGTGGG +
Preference number: 4 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEESEVGK*MQQYCG
Trigger: CCCACAGTATTGCTGCATCCATTTCCCAACCTCAGA...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGTGGTACTGCTGCTCTTaGACTCTCCATTCACCTTCT +
Preference number: 4 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEEWYCCS*TLHSPS
Trigger: AGAAGGTGAATGGAGAGTCCAAGAGCAGCAGTACCA...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAATGTCCCCACTCTCGCTaGTACTGCTGCTCTTGGACT +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKCPHSR*YCCSWT
Trigger: AGTCCAAGAGCAGCAGTACCAGCGAGAGTGGGGACA...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAAGGTCATGGGCAACCTTaGTGGACGGATCTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKGHGQP*WTDLLE
Trigger: TTCCAGCAGATCCGTCCACCAAGGTTGCCCATGACC...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAACTCCAAAGTGGGTCATaGGCAACCTTGGTGGACGGA +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKLQSGS*ATLVDG
Trigger: TCCGTCCACCAAGGTTGCCCATGACCCACTTTGGAG...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAACTCCAAAGTGGGTCATaGGCAACCTTGGTGGACGGA +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKLQSGS*ATLVDG
Trigger: TCCGTCCACCAAGGTTGCCCATGACCCACTTTGGAG...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGAAAGTACCTCCAAAGTaGGTCATGGGCAACCTTGGT +
Preference number: 4 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEEKVPPK*VMGNLG
Trigger: ACCAAGGTTGCCCATGACCCACTTTGGAGGTACTTT...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAACATAGGGTAAGTCACTaGGGCAGTAGAAGGCACCGC +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKHRVSH*GSRRHR
Trigger: GCGGTGCCTTCTACTGCCCCAGTGACTTACCCTATG...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAACTGGGGGCATCCCATTaGTGTCTGAGGCATAGGGTA +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKLGASH*CLRHRV
Trigger: TACCCTATGCCTCAGACACCAATGGGATGCCCCCAG...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGATTTTAGGAGTAGGCTaGGGGCATCCCATTGGTGTC +
Preference number: 4 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKILGVG*GHPIGV
Trigger: GACACCAATGGGATGCCCCCAGCCTACTCCTAAAAT...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGCCTCATCAGCCAAGCTaGTTCATATGCACACTGTTC +
Preference number: 4 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEEPHQPS*FICTLF
Trigger: GAACAGTGTGCATATGAACCAGCTTGGCTGATGAGG...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGATCCTGGCTGTTTGCTaGCAAATGGCTGCTGGACTT +
Preference number: 4 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKILAVC*QMAAGL
Trigger: AAGTCCAGCAGCCATTTGCCAGCAAACAGCCAGGAT...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCACGCCAGAGGCTGGATTaGCGCAAAACCCATCTGAGC +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSRQRLD*RKTHLS
Trigger: GCTCAGATGGGTTTTGCGCCAATCCAGCCTCTGGCG...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGTCAATCTATATCCCCTaGCCCCACAGGTTTGAAGTC +
Preference number: 4 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEESIYIP*PHRFEV
Trigger: GACTTCAAACCTGTGGGGCCAGGGGATATAGATTGA...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358602.9
CDS-3UTR TCA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGTCTGTTTTATGCTCTTaGTCCGCGCCTGCTTCCAAA +
Preference number: 4 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKSVLCS*SAPASK
Trigger: TTTGGAAGCAGGCGCGGATCAAGAGCATAAAACAGA...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCATCCACAACACCAACATaGCCAGCTGTGGCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSSTTPT*PAVAAK
Trigger: CTTGGCTGCCACAGCTGGTCATGTTGGTGTTGTGGA...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGCGATTGGTTTCTATCTaGGCATTTATGTCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEERLVSI*AFMSEP
Trigger: GGGCTCTGACATAAATGCTCAGATAGAAACCAATCG...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAAGCTTGCACCAGTAACTaGACCACATCGAGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKACTSN*TTSRCP
Trigger: TGGACACCTCGATGTGGTTCAGTTACTGGTGCAAGC...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAACGCACCACCTTCACATaGCCCTTTCTAAATGCTGCC +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKRTTFT*PFLNAA
Trigger: GGCAGCATTTAGAAAGGGTCATGTGAAGGTGGTGCG...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp ATACGGAGCATTTCAATCTATATCCCCTGGCCCCACAGGTTTGAAGTCAAGAAAAGTTGCTTGTCTTGTTaGTTCAGTGCCACCCCTTAT +
Preference number: 4 (lower is better)
Translates to: IRSISIYIPWPHRFEVKKSCLSC*FSATPY
Trigger: ATAAGGGGTGGCACTGAATCAACAAGACAAGCAACT...TTTCTTGACTTCAAACCTGTGGGGCCAGGGGATATAGATTGAAATGCTCCGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000358602.9
CDS-3UTR TCA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGATCTGCTGGAAAGTCTaGGCAGCAAGCAAAGCATGT +
Preference number: 4 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKICWKV*AASKAC
Trigger: ACATGCTTTGCTTGCTGCTCAGACTTTCCAGCAGAT...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAGGACCCCAAGTGGATTaGGCTGGTGGAAAAGTACCT +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKGPQVD*AGGKVP
Trigger: AGGTACTTTTCCACCAGCTCAATCCACTTGGGGTCC...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCATGGCGAGGCACCATGTaGGGCTTAGGCGAGTTAGTA +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSWRGTM*GLGELV
Trigger: TACTAACTCGCCTAAGCCTCACATGGTGCCTCGCCA...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAAGAACCACTGCTATTCTaGTTGCTATGGCGAGGCACC +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKEPLLF*LLWRGT
Trigger: GGTGCCTCGCCATAGCAATCAGAATAGCAGTGGTTC...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGTGGGGAAGATGGGGATaGTACTGGATAGTGTTCTTT +
Preference number: 4 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEEWGRWG*YWIVFF
Trigger: AAAGAACACTATCCAGTATCATCCCCATCTTCCCCA...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCCCTCCCCAGAAGGCATaGGCAGAAGTAGGGCTGTTT +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFPPQKA*AEVGLF
Trigger: AAACAGCCCTACTTCTGCTCATGCCTTCTGGGGAGG...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGAACTCCCGAGGATACTaGCTGTGCAGAAGAATCATT +
Preference number: 4 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEENSRGY*LCRRII
Trigger: AATGATTCTTCTGCACAGTCAGTATCCTCGGGAGTT...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCGGAACTTTCCTGTCCTaGGACACATTGCTGGGCTTT +
Preference number: 4 (lower is better)
Translates to: MGNGQSQMFTENRSVSKIGTFLS*DTLLGF
Trigger: AAAGCCCAGCAATGTGTCTCAGGACAGGAAAGTTCC...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCACGTTCCAGTTTGCCTaGTACGTGCAGAACGTTCAG +
Preference number: 4 (lower is better)
Translates to: MGNGQSQMFTENRSVSKITFQFA*YVQNVQ
Trigger: CTGAACGTTCTGCACGTATCAGGCAAACTGGAACGT...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp ATACGGAGCATTTCAATCTATATCCCCTGGCCCCACAGGTTTGAAGTCAAGAAAAATAACAGATGGAGCTaGCGTTCCAGTTTGCCTGAT +
Preference number: 4 (lower is better)
Translates to: IRSISIYIPWPHRFEVKKNNRWS*RSSLPD
Trigger: ATCAGGCAAACTGGAACGTCAGCTCCATCTGTTATT...TTTCTTGACTTCAAACCTGTGGGGCCAGGGGATATAGATTGAAATGCTCCGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000358602.9
CDS-3UTR TCA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGGCCACTATGTCCTACTaGTGTAGACAAATTGCTCCC +
Preference number: 4 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKATMSY*CRQIAP
Trigger: GGGAGCAATTTGTCTACATCAGTAGGACATAGTGGC...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCCCTGCAGGAACATGCTaGTGGAATGTACCAGAAGGA +
Preference number: 4 (lower is better)
Translates to: MGNGQSQMFTENRSVSKIPAGTC*WNVPEG
Trigger: TCCTTCTGGTACATTCCATCAGCATGTTCCTGCAGG...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAACCAGTCCACACCGTTTaGGGGCCATTATTTTCCGTG +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKPVHTV*GPLFSV
Trigger: CACGGAAAATAATGGCCCTCAAACGGTGTGGACTGG...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGCTGGAGACTGATTGGTaGTGTAACCCTGTACATCCT +
Preference number: 4 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKLETDW*CNPVHP
Trigger: AGGATGTACAGGGTTACATCACCAATCAGTCTCCAG...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp ATACGGAGCATTTCAATCTATATCCCCTGGCCCCACAGGTTTGAAGTCAAGAAATCTGTTAACTTTCCCTaGGCCTCTTCTACAATGCTC +
Preference number: 4 (lower is better)
Translates to: IRSISIYIPWPHRFEVKKSVNFP*ASSTML
Trigger: GAGCATTGTAGAAGAGGCTCAGGGAAAGTTAACAGA...TTTCTTGACTTCAAACCTGTGGGGCCAGGGGATATAGATTGAAATGCTCCGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358602.9
CDS-3UTR TCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAGTAAGTTGGTCAGCATaGGCCAGTTCCAAGGACTGC +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKVSWSA*ASSKDC
Trigger: GCAGTCCTTGGAACTGGCTCATGCTGACCAACTTAC...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAGCCCTGCATTTGCTGTaGTTTCAGCTCTCATACGGG +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKALHLL*FQLSYG
Trigger: CCCGTATGAGAGCTGAAAGCACAGCAAATGCAGGGC...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCCGACTGCCCTGCATTTaGTGTGCTTTCAGCTCTCAT +
Preference number: 4 (lower is better)
Translates to: MGNGQSQMFTENRSVSKIRLPCI*CAFSSH
Trigger: ATGAGAGCTGAAAGCACAGCAAATGCAGGGCAGTCG...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAGTTGTCCGACTGCCCTaGATTTGCTGTGCTTTCAGC +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKVVRLP*ICCAFS
Trigger: GCTGAAAGCACAGCAAATGCAGGGCAGTCGGACAAC...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAAGTTGTCCGACTGCCCTaGATTTGCTGTGCTTTCAGC +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKVVRLP*ICCAFS
Trigger: GCTGAAAGCACAGCAAATGCAGGGCAGTCGGACAAC...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCCTCTTGATCCGCGCCTaGTTCCAAAAGAAATCGCAC +
Preference number: 4 (lower is better)
Translates to: MGNGQSQMFTENRSVSKILLIRA*FQKKSH
Trigger: GTGCGATTTCTTTTGGAAGCAGGCGCGGATCAAGAG...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAACAACATGGCCATCCATaGAAGCCTCCATCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKQHGHP*KPPSEQ
Trigger: CTGCTCTGATGGAGGCTTGCATGGATGGCCATGTTG...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCAGCCGCAAGTTCCACATaGCCACCACATGCAGCCAAA +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSAASST*PPHAAK
Trigger: TTTGGCTGCATGTGGTGGGCATGTGGAACTTGCGGC...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCCCCTGTTGCTGTTGTTaGATGAACGTTAGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: MGNGQSQMFTENRSVSKIPCCCC*MNVSSC
Trigger: GCAGGAGCTAACGTTCATGCAACAACAGCAACAGGG...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGTGCTGTATCCCCTGTTaGTGTTGTTGCATGAACGTT +
Preference number: 4 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEECCIPC*CCCMNV
Trigger: AACGTTCATGCAACAACAGCAACAGGGGATACAGCA...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGTTGGGAAATGGATaGAGCAATACTGTGGGTAGG +
Preference number: 4 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKRLGNG*SNTVGR
Trigger: CCTACCCACAGTATTGCTGCATCCATTTCCCAACCT...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGCTGGGCTTCAATGTCTaGACCATTGTCCAGCAATAT +
Preference number: 4 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEELGFNV*TIVQQY
Trigger: ATATTGCTGGACAATGGTGCAGACATTGAAGCCCAG...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGACATCAGAGGAGAGATaGCCAATTTGCTACCAGTTC +
Preference number: 4 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEETSEER*PICYQF
Trigger: GAACTGGTAGCAAATTGGGCATCTCTCCTCTGATGT...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGGCTGGCGTTTTTGTTTaGTTCAGCAGCCTGTCTATC +
Preference number: 4 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKAGVFV*FSSLSI
Trigger: GATAGACAGGCTGCTGAAGCAAACAAAAACGCCAGC...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAACACTCTCGCTGGTACTaGTGCTCTTGGACTCTCCAT +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKHSRWY*CSWTLH
Trigger: ATGGAGAGTCCAAGAGCAGCAGTACCAGCGAGAGTG...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTGCAGGCACAGTGAGTaGTGTGGCAGTTTGAGATGT +
Preference number: 4 (lower is better)
Translates to: MGNGQSQMFTENRSVSKICRHSE*CGSLRC
Trigger: ACATCTCAAACTGCCACAGCACTCACTGTGCCTGCA...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGTCACCTGAGAACCACTaGTATTCTGATTGCTATGGC +
Preference number: 4 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEESPENH*YSDCYG
Trigger: GCCATAGCAATCAGAATAGCAGTGGTTCTCAGGTGA...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCGCTGACGTTCCAGTTTaGCTGATACGTGCAGAACGT +
Preference number: 4 (lower is better)
Translates to: MGNGQSQMFTENRSVSKIADVPV*LIRAER
Trigger: ACGTTCTGCACGTATCAGGCAAACTGGAACGTCAGC...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp ATACGGAGCATTTCAATCTATATCCCCTGGCCCCACAGGTTTGAAGTCAAGAAAAAAGTCCATGTAGCCTaGAGGAACATGCTGATGGAA +
Preference number: 4 (lower is better)
Translates to: IRSISIYIPWPHRFEVKKKVHVA*RNMLME
Trigger: TTCCATCAGCATGTTCCTGCAGGCTACATGGACTTT...TTTCTTGACTTCAAACCTGTGGGGCCAGGGGATATAGATTGAAATGCTCCGTAT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000358602.9
CDS-3UTR GCA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGACCATCAGGGATAGGTaGTACTGGAGGAATCATTGC +
Preference number: 4 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKTIRDR*YWRNHC
Trigger: GCAATGATTCCTCCAGTAGCACCTATCCCTGATGGT...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCACTGTTCATGTGAGGTaGCCAGGGTCCAGTCCACAC +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFTVHVR*PGSSPH
Trigger: GTGTGGACTGGACCCTGGGCACCTCACATGAACAGT...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCAACTGTTCATGTGAGGTaGCCAGGGTCCAGTCCACAC +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSTVHVR*PGSSPH
Trigger: GTGTGGACTGGACCCTGGGCACCTCACATGAACAGT...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTACATCCTGGCTGTTTaGTGGCAAATGGCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: MGNGQSQMFTENRSVSKIYILAV*WQMAAG
Trigger: TCCAGCAGCCATTTGCCAGCAAACAGCCAGGATGTA...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp ATACGGAGCATTTCAATCTATATCCCCTGGCCCCACAGGTTTGAAGTCAAGAAATTTCTAGCAGCAATCTaGCTACTTCCACATGTCCAG +
Preference number: 4 (lower is better)
Translates to: IRSISIYIPWPHRFEVKKFLAAI*LLPHVQ
Trigger: CTGGACATGTGGAAGTAGCCAGATTGCTGCTAGAAA...TTTCTTGACTTCAAACCTGTGGGGCCAGGGGATATAGATTGAAATGCTCCGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358602.9
CDS-3UTR CCA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCCTAGCTACTTCAACATaGCCATCCATGCAAGCCTCC +
Preference number: 4 (lower is better)
Translates to: MGNGQSQMFTENRSVSKILATST*PSMQAS
Trigger: GGAGGCTTGCATGGATGGCCATGTTGAAGTAGCTAG...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAAGGGCAGTGCTTGAACTaGTACACGAGGAGCCCTATT +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKGQCLN*YTRSPI
Trigger: AATAGGGCTCCTCGTGTACCAGTTCAAGCACTGCCC...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCGAGGTGGAACAACCATaGGCAGTGCTTGAACTGGTA +
Preference number: 4 (lower is better)
Translates to: MGNGQSQMFTENRSVSKIEVEQP*AVLELV
Trigger: TACCAGTTCAAGCACTGCCCATGGTTGTTCCACCTC...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAAGAGTGGTGGCAACATTaGCAGGTGGTTTGTCAGGCT +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKEWWQH*QVVCQA
Trigger: AGCCTGACAAACCACCTGCCAATGTTGCCACCACTC...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAGAGTGGTGGCAACATTaGCAGGTGGTTTGTCAGGCT +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKEWWQH*QVVCQA
Trigger: AGCCTGACAAACCACCTGCCAATGTTGCCACCACTC...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGATAGGACTTGGAGTTaGAGTCTGAGGTTGGGAAAT +
Preference number: 4 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEEDRTWS*SLRLGN
Trigger: ATTTCCCAACCTCAGACTCCAACTCCAAGTCCTATC...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGAGAGATGATAGGACTTaGAGTTGGAGTCTGAGGTTG +
Preference number: 4 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEERDDRT*SWSLRL
Trigger: CAACCTCAGACTCCAACTCCAAGTCCTATCATCTCT...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCATGTACCAGTTCCTCGTaGCCACCAGCACAGGCAAGT +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSCTSSS*PPAQAS
Trigger: ACTTGCCTGTGCTGGTGGCCACGAGGAACTGGTACA...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGCAGCCAAGATGAGTaGAGTAAAACCTTTCTTGTC +
Preference number: 4 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEEGSQDE*SKTFLV
Trigger: GACAAGAAAGGTTTTACTCCACTCATCTTGGCTGCC...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp ATACGGAGCATTTCAATCTATATCCCCTGGCCCCACAGGTTTGAAGTCAAGAAATTGGTTCTTTCAGACTaGGCTTCAATGTCTGCACCA +
Preference number: 4 (lower is better)
Translates to: IRSISIYIPWPHRFEVKKLVLSD*ASMSAP
Trigger: TGGTGCAGACATTGAAGCCCAGTCTGAAAGAACCAA...TTTCTTGACTTCAAACCTGTGGGGCCAGGGGATATAGATTGAAATGCTCCGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358602.9
CDS-3UTR CCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAACATGGGCAACCTTGGTaGACGGATCTGCTGGAAAGT +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKHGQPW*TDLLES
Trigger: ACTTTCCAGCAGATCCGTCCACCAAGGTTGCCCATG...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCGGTCATGGGCAACCTTaGTGGACGGATCTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFGHGQP*WTDLLE
Trigger: TTCCAGCAGATCCGTCCACCAAGGTTGCCCATGACC...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGCCAAGTGGATTGAGCTaGTGGAAAAGTACCTCCAAA +
Preference number: 4 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEEPSGLS*WKSTSK
Trigger: TTTGGAGGTACTTTTCCACCAGCTCAATCCACTTGG...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp ATACGGAGCATTTCAATCTATATCCCCTGGCCCCACAGGTTTGAAGTCAAGAAAGATATGTGGCATTTGTaGGTGCAGTGTTGTTGTTGC +
Preference number: 4 (lower is better)
Translates to: IRSISIYIPWPHRFEVKKDMWHL*VQCCCC
Trigger: GCAACAACAACACTGCACCCACAAATGCCACATATC...TTTCTTGACTTCAAACCTGTGGGGCCAGGGGATATAGATTGAAATGCTCCGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358602.9
CDS-3UTR CCA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGATATGTGGCATTTGTaGGTGCAGTGTTGTTGTTGC +
Preference number: 4 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEEDMWHL*VQCCCC
Trigger: GCAACAACAACACTGCACCCACAAATGCCACATATC...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCACTGGGGGCATCCCATTaGTGTCTGAGGCATAGGGTA +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSLGASH*CLRHRV
Trigger: TACCCTATGCCTCAGACACCAATGGGATGCCCCCAG...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCATTTTAGGAGTAGGCTaGGGGCATCCCATTGGTGTC +
Preference number: 4 (lower is better)
Translates to: MGNGQSQMFTENRSVSKIILGVG*GHPIGV
Trigger: GACACCAATGGGATGCCCCCAGCCTACTCCTAAAAT...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAATGTGCCATGAGGGGGTaGTCTAATAGCAGGGGTTTC +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKCAMRG*SNSRGF
Trigger: GAAACCCCTGCTATTAGACCACCCCCTCATGGCACA...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGATAGGTGCTACTaGAGGAATCATTGCATTCCC +
Preference number: 4 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKRDRCY*RNHCIP
Trigger: GGGAATGCAATGATTCCTCCAGTAGCACCTATCCCT...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAATGCTTGGCCCAGTACTaGCTGTCCAACTATCACTCC +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKCLAQY*LSNYHS
Trigger: GGAGTGATAGTTGGACAGCCAGTACTGGGCCAAGCA...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp ATACGGAGCATTTCAATCTATATCCCCTGGCCCCACAGGTTTGAAGTCAAGAAATGCTGTATTGCCTGTTaGAGACTGTGCATTAACATC +
Preference number: 4 (lower is better)
Translates to: IRSISIYIPWPHRFEVKKCCIAC*RLCINI
Trigger: GATGTTAATGCACAGTCTTCAACAGGCAATACAGCA...TTTCTTGACTTCAAACCTGTGGGGCCAGGGGATATAGATTGAAATGCTCCGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358602.9
CDS-3UTR TCA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGTCCATAAGAGGGGTATaGCCATTTTCATTATGGTCC +
Preference number: 4 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEESIRGV*PFSLWS
Trigger: GGACCATAATGAAAATGGTCATACCCCTCTTATGGA...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGTTGATATTTGCTCCTTaGCCAAGAAGTAATGCCACC +
Preference number: 4 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEELIFAP*PRSNAT
Trigger: GGTGGCATTACTTCTTGGTCAAGGAGCAAATATCAA...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAGATCTGCGCCTGCCTaGAGTAAGACATCTGCTACA +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKRSAPA*SKTSAT
Trigger: TGTAGCAGATGTCTTACTTCAGGCAGGCGCAGATCT...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCAGTAGGATCTGCCCCATaGGCCAAAAGTAGTTCCACC +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSVGSAP*AKSSST
Trigger: GGTGGAACTACTTTTGGCTCATGGGGCAGATCCTAC...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAACTTGGAGTTGGAGTCTaGGGTTGGGAAATGGATGCA +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKLGVGV*GWEMDA
Trigger: TGCATCCATTTCCCAACCTCAGACTCCAACTCCAAG...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGCGATTGGTTTCTATCTaGGCATTTATGTCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKRLVSI*AFMSEP
Trigger: GGGCTCTGACATAAATGCTCAGATAGAAACCAATCG...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGTTACGTACATCAATATaGGCTCCCCTGCCAATAAGA +
Preference number: 4 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEELRTSI*APLPIR
Trigger: TCTTATTGGCAGGGGAGCTCATATTGATGTACGTAA...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCGCTTGCACCAGTAACTaGACCACATCGAGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFACTSN*TTSRCP
Trigger: TGGACACCTCGATGTGGTTCAGTTACTGGTGCAAGC...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCAGCTTGCACCAGTAACTaGACCACATCGAGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSACTSN*TTSRCP
Trigger: TGGACACCTCGATGTGGTTCAGTTACTGGTGCAAGC...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCACGCACCACCTTCACATaGCCCTTTCTAAATGCTGCC +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSRTTFT*PFLNAA
Trigger: GGCAGCATTTAGAAAGGGTCATGTGAAGGTGGTGCG...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGGACTCCATACAAAGATaGCACTTCTTCAGCATCTCC +
Preference number: 4 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKDSIQR*HFFSIS
Trigger: GGAGATGCTGAAGAAGTGTCATCTTTGTATGGAGTC...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp ATACGGAGCATTTCAATCTATATCCCCTGGCCCCACAGGTTTGAAGTCAAGAAATTCACCTTCTCTGGCTaGCTGTATGAAATTGGTAGT +
Preference number: 4 (lower is better)
Translates to: IRSISIYIPWPHRFEVKKFTFSG*LYEIGS
Trigger: ACTACCAATTTCATACAGTCAGCCAGAGAAGGTGAA...TTTCTTGACTTCAAACCTGTGGGGCCAGGGGATATAGATTGAAATGCTCCGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358602.9
CDS-3UTR TCA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCAGTGACCACAGCTGGTaGATGATTGTCACTCTTACG +
Preference number: 4 (lower is better)
Translates to: MGNGQSQMFTENRSVSKISDHSW*MIVTLT
Trigger: CGTAAGAGTGACAATCATTCACCAGCTGTGGTCACT...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGTTGCTTGTCTTGTTaGTTCAGTGCCACCCCTTAT +
Preference number: 4 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKSCLSC*FSATPY
Trigger: ATAAGGGGTGGCACTGAATCAACAAGACAAGCAACT...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCAGTGCTGTGGCAGTTTaGGATGTTGATGACAGAGCT +
Preference number: 4 (lower is better)
Translates to: MGNGQSQMFTENRSVSKISAVAV*DVDDRA
Trigger: AGCTCTGTCATCAACATCTCAAACTGCCACAGCACT...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAACCTTCGGACAGAAGGTaGACTTGGACTGCCATTTGT +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKPSDRR*TWTAIC
Trigger: ACAAATGGCAGTCCAAGTTCACCTTCTGTCCGAAGG...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCATGGCGAGTCCATATTaGCAATACCTGAGGGACTTG +
Preference number: 4 (lower is better)
Translates to: MGNGQSQMFTENRSVSKIMASPY*QYLRDL
Trigger: CAAGTCCCTCAGGTATTGTCAATATGGACTCGCCAT...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCCCAGGTCCGTACATCTaGCCTCCTGAAATGTTTGAA +
Preference number: 4 (lower is better)
Translates to: MGNGQSQMFTENRSVSKIPGPYI*PPEMFE
Trigger: TTCAAACATTTCAGGAGGTCAGATGTACGGACCTGG...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAAGGAACTTTCCTGTCCTaGGACACATTGCTGGGCTTT +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKGTFLS*DTLLGF
Trigger: AAAGCCCAGCAATGTGTCTCAGGACAGGAAAGTTCC...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAAACGTTCCAGTTTGCCTaGTACGTGCAGAACGTTCAG +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKTFQFA*YVQNVQ
Trigger: CTGAACGTTCTGCACGTATCAGGCAAACTGGAACGT...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGCATTGCTTGATGTTGTaGAAATACTCCTGGGTCAGA +
Preference number: 4 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEEHCLML*KYSWVR
Trigger: TCTGACCCAGGAGTATTTTCACAACATCAAGCAATG...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAACCTGCAGGAACATGCTaGTGGAATGTACCAGAAGGA +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKPAGTC*WNVPEG
Trigger: TCCTTCTGGTACATTCCATCAGCATGTTCCTGCAGG...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAAGAAGGGTCTGCAGCATaGGGGCCATTAAATATGGGT +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKEGSAA*GPLNMG
Trigger: ACCCATATTTAATGGCCCTCATGCTGCAGACCCTTC...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCCCAGTCCACACCGTTTaGGGGCCATTATTTTCCGTG +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFPVHTV*GPLFSV
Trigger: CACGGAAAATAATGGCCCTCAAACGGTGTGGACTGG...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCACCAGTCCACACCGTTTaGGGGCCATTATTTTCCGTG +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSPVHTV*GPLFSV
Trigger: CACGGAAAATAATGGCCCTCAAACGGTGTGGACTGG...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCTGCAGGCTAACAAGCTaGTCCTCATCAGCCAAGCTG +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFCRLTS*SSSAKL
Trigger: CAGCTTGGCTGATGAGGATCAGCTTGTTAGCCTGCA...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGTCTGTTAACTTTCCCTaGGCCTCTTCTACAATGCTC +
Preference number: 4 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKSVNFP*ASSTML
Trigger: GAGCATTGTAGAAGAGGCTCAGGGAAAGTTAACAGA...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCAGTAAGTTGGTCAGCATaGGCCAGTTCCAAGGACTGC +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSVSWSA*ASSKDC
Trigger: GCAGTCCTTGGAACTGGCTCATGCTGACCAACTTAC...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAACCTCCCTTGTTTTGTTaGGCTCCTCGATCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKPPLFC*APRSSP
Trigger: AGGAGAAGATCGAGGAGCTCAACAAAACAAGGGAGG...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAACCTCCCTTGTTTTGTTaGGCTCCTCGATCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKPPLFC*APRSSP
Trigger: AGGAGAAGATCGAGGAGCTCAACAAAACAAGGGAGG...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCAGCCCTGCATTTGCTGTaGTTTCAGCTCTCATACGGG +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSALHLL*FQLSYG
Trigger: CCCGTATGAGAGCTGAAAGCACAGCAAATGCAGGGC...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCAGTTGTCCGACTGCCCTaGATTTGCTGTGCTTTCAGC +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSVVRLP*ICCAFS
Trigger: GCTGAAAGCACAGCAAATGCAGGGCAGTCGGACAAC...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCGTTGTCCGACTGCCCTaGATTTGCTGTGCTTTCAGC +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFVVRLP*ICCAFS
Trigger: GCTGAAAGCACAGCAAATGCAGGGCAGTCGGACAAC...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCACAACATGGCCATCCATaGAAGCCTCCATCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSQHGHP*KPPSEQ
Trigger: CTGCTCTGATGGAGGCTTGCATGGATGGCCATGTTG...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCCAACATGGCCATCCATaGAAGCCTCCATCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFQHGHP*KPPSEQ
Trigger: CTGCTCTGATGGAGGCTTGCATGGATGGCCATGTTG...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAACCCTGTTGCTGTTGTTaGATGAACGTTAGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKPCCCC*MNVSSC
Trigger: GCAGGAGCTAACGTTCATGCAACAACAGCAACAGGG...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAACAACCATGGGCAGTaGTTGAACTGGTACACGAGG +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKNNHGQ*LNWYTR
Trigger: CCTCGTGTACCAGTTCAAGCACTGCCCATGGTTGTT...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCCCTTTCTTGTCTCGGTaGTCTATACTAGCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: MGNGQSQMFTENRSVSKIPFLSR*SILAPL
Trigger: GAGAGGAGCTAGTATAGAGCACCGAGACAAGAAAGG...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGTTAACAGCAGCTGTATaGCCATTCATAGCTGCTAAC +
Preference number: 4 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEELTAAV*PFIAAN
Trigger: GTTAGCAGCTATGAATGGGCATACAGCTGCTGTTAA...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCGCTGGCGTTTTTGTTTaGTTCAGCAGCCTGTCTATC +
Preference number: 4 (lower is better)
Translates to: MGNGQSQMFTENRSVSKIAGVFV*FSSLSI
Trigger: GATAGACAGGCTGCTGAAGCAAACAAAAACGCCAGC...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGTTTACCATGAGAACCTaGCAAAGTTGTCCAGGTTGC +
Preference number: 4 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKFTMRT*QSCPGC
Trigger: GCAACCTGGACAACTTTGGCAGGTTCTCATGGTAAA...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAATCTCGCTGGTACTGCTaGTCTTGGACTCTCCATTCA +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKSRWYC*SWTLHS
Trigger: TGAATGGAGAGTCCAAGAGCAGCAGTACCAGCGAGA...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGACAAGAACTGATGGCTaGTTTTTGCTGCTCACAGTG +
Preference number: 4 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKTRTDG*FLLLTV
Trigger: CACTGTGAGCAGCAAAAAGCAGCCATCAGTTCTTGT...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAATGCAGGCACAGTGAGTaGTGTGGCAGTTTGAGATGT +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKCRHSE*CGSLRC
Trigger: ACATCTCAAACTGCCACAGCACTCACTGTGCCTGCA...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGTCACCTGAGAACCACTaGTATTCTGATTGCTATGGC +
Preference number: 4 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKSPENH*YSDCYG
Trigger: GCCATAGCAATCAGAATAGCAGTGGTTCTCAGGTGA...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAATACTGGTGGACTACCTaGTTCCTGTTCGGAGGAAGA +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKYWWTT*FLFGGR
Trigger: TCTTCCTCCGAACAGGAAGCAGGTAGTCCACCAGTA...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAATACTGGTGGACTACCTaGTTCCTGTTCGGAGGAAGA +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKYWWTT*FLFGGR
Trigger: TCTTCCTCCGAACAGGAAGCAGGTAGTCCACCAGTA...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGTTTGCCTGATACGTaGAGAACGTTCAGTCCCAAT +
Preference number: 4 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKSLPDT*RTFSPN
Trigger: ATTGGGACTGAACGTTCTGCACGTATCAGGCAAACT...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAGCTGACGTTCCAGTTTaGCTGATACGTGCAGAACGT +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKADVPV*LIRAER
Trigger: ACGTTCTGCACGTATCAGGCAAACTGGAACGTCAGC...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAATACATCCTGGCTGTTTaGTGGCAAATGGCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKYILAV*WQMAAG
Trigger: TCCAGCAGCCATTTGCCAGCAAACAGCCAGGATGTA...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCGCCAGTTCCAAGGACTaGAGCTGTGCATTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: MGNGQSQMFTENRSVSKIASSKD*SCAFFS
Trigger: AGAAAAGAATGCACAGCTGCAGTCCTTGGAACTGGC...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAATCTCCCTCAGAAAGCTaGTCTCCAACTCCAACAGGA +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKSPSES*SPTPTG
Trigger: TCCTGTTGGAGTTGGAGAGCAGCTTTCTGAGGGAGA...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCTCTGTCAGAATTCCTTaGCCCAGCCCTGCCAACTGT +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFSVRIP*PSPANC
Trigger: ACAGTTGGCAGGGCTGGGGCAAGGAATTCTGACAGA...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAATGCTCTTCCACTGACTaGTGCCATGATGTCATCCAG +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKCSSTD*CHDVIQ
Trigger: CTGGATGACATCATGGCAGCAGTCAGTGGAAGAGCA...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358602.9
ENST00000509867.6
CDS-3UTR CCA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGCTGATAAGAGCAACTTaGAAGCTGTTTCCAGCATTG +
Preference number: 4 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEELIRAT*KLFPAL
Trigger: CAATGCTGGAAACAGCTTCCAAGTTGCTCTTATCAG...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCAGGGCAGTGCTTGAACTaGTACACGAGGAGCCCTATT +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSGQCLN*YTRSPI
Trigger: AATAGGGCTCCTCGTGTACCAGTTCAAGCACTGCCC...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAGAGGTGGAACAACCATaGGCAGTGCTTGAACTGGTA +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKEVEQP*AVLELV
Trigger: TACCAGTTCAAGCACTGCCCATGGTTGTTCCACCTC...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCGAGTGGTGGCAACATTaGCAGGTGGTTTGTCAGGCT +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFEWWQH*QVVCQA
Trigger: AGCCTGACAAACCACCTGCCAATGTTGCCACCACTC...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGATGCAGCAATACTGTaGGTAGGAGTGTTTGACATT +
Preference number: 4 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEEDAAIL*VGVFDI
Trigger: AATGTCAAACACTCCTACCCACAGTATTGCTGCATC...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGGATAGGACTTGGAGTTaGAGTCTGAGGTTGGGAAAT +
Preference number: 4 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKDRTWS*SLRLGN
Trigger: ATTTCCCAACCTCAGACTCCAACTCCAAGTCCTATC...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGAGATGATAGGACTTaGAGTTGGAGTCTGAGGTTG +
Preference number: 4 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKRDDRT*SWSLRL
Trigger: CAACCTCAGACTCCAACTCCAAGTCCTATCATCTCT...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGCAGCCTGTCTATCTTTaGCTTGTACTATTGACTCCA +
Preference number: 4 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEEQPVYL*LVLLTP
Trigger: TGGAGTCAATAGTACAAGCCAAAGATAGACAGGCTG...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTGGTACTGCTGCTCTTaGACTCTCCATTCACCTTCT +
Preference number: 4 (lower is better)
Translates to: MGNGQSQMFTENRSVSKIWYCCS*TLHSPS
Trigger: AGAAGGTGAATGGAGAGTCCAAGAGCAGCAGTACCA...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGTTTCATCGCTGCAGCTaGAAATCCTCATGTTATCAC +
Preference number: 4 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEEFHRCS*KSSCYH
Trigger: GTGATAACATGAGGATTTCCAGCTGCAGCGATGAAA...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCACATGGGCAACCTTGGTaGACGGATCTGCTGGAAAGT +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSHGQPW*TDLLES
Trigger: ACTTTCCAGCAGATCCGTCCACCAAGGTTGCCCATG...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCAAAGTACCTCCAAAGTaGGTCATGGGCAACCTTGGT +
Preference number: 4 (lower is better)
Translates to: MGNGQSQMFTENRSVSKIKVPPK*VMGNLG
Trigger: ACCAAGGTTGCCCATGACCCACTTTGGAGGTACTTT...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGTGTTTCTACTACTGGTaGACTACCTGCTTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKCFYYW*TTCFLF
Trigger: GAACAGGAAGCAGGTAGTCCACCAGTAGTAGAAACA...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGAGAACTGCTGCTGTTTaGAGGTCTAGTGTTTGTTGT +
Preference number: 4 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEERTAAV*RSSVCC
Trigger: ACAACAAACACTAGACCTCCAAACAGCAGCAGTTCT...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAAATTTTAGGAGTAGGCTaGGGGCATCCCATTGGTGTC +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKILGVG*GHPIGV
Trigger: GACACCAATGGGATGCCCCCAGCCTACTCCTAAAAT...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAATTTTAGGAGTAGGCTaGGGGCATCCCATTGGTGTC +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKILGVG*GHPIGV
Trigger: GACACCAATGGGATGCCCCCAGCCTACTCCTAAAAT...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCATGTGCCATGAGGGGGTaGTCTAATAGCAGGGGTTTC +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSCAMRG*SNSRGF
Trigger: GAAACCCCTGCTATTAGACCACCCCCTCATGGCACA...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAACCTGAGACACATTGCTaGGCTTTTCTGACCCTAACG +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKPETHC*AFLTLT
Trigger: CGTTAGGGTCAGAAAAGCCCAGCAATGTGTCTCAGG...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGTCAGACATCGGTCTGTaGATCATAGGATTTCCCATC +
Preference number: 4 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKSDIGL*IIGFPI
Trigger: GATGGGAAATCCTATGATCCACAGACCGATGTCTGA...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCAGGGATAGGTGCTACTaGAGGAATCATTGCATTCCC +
Preference number: 4 (lower is better)
Translates to: MGNGQSQMFTENRSVSKIRDRCY*RNHCIP
Trigger: GGGAATGCAATGATTCCTCCAGTAGCACCTATCCCT...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCAGTAATCCCAGGTGTTaGCAAGACTGTTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: MGNGQSQMFTENRSVSKISNPRC*QDCCCC
Trigger: ACAGCAGCAACAGTCTTGCCAACACCTGGGATTACT...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCTGCTTGGCCCAGTACTaGCTGTCCAACTATCACTCC +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFCLAQY*LSNYHS
Trigger: GGAGTGATAGTTGGACAGCCAGTACTGGGCCAAGCA...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCGGGTCTGAGCAGGGCTaGCTACCATTAACCCTTGTT +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFGSEQG*LPLTLV
Trigger: AACAAGGGTTAATGGTAGCCAGCCCTGCTCAGACCC...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCAGGGTCTGAGCAGGGCTaGCTACCATTAACCCTTGTT +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSGSEQG*LPLTLV
Trigger: AACAAGGGTTAATGGTAGCCAGCCCTGCTCAGACCC...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGCATCCTGATCCAAAATaGAAGACTCCACCTCAGAAA +
Preference number: 4 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKHPDPK*KTPPQK
Trigger: TTTCTGAGGTGGAGTCTTTCATTTTGGATCAGGATG...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000558247.5
CDS-3UTR TCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAACACTTCGCCCTTCAATaGGTAACTTTCGCACAGCAT +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKHFALQ*VTFAQH
Trigger: ATGCTGTGCGAAAGTTACTCATTGAAGGGCGAAGTG...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAATCTGTTTTATGCTCTTaGTCCGCGCCTGCTTCCAAA +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKSVLCS*SAPASK
Trigger: TTTGGAAGCAGGCGCGGATCAAGAGCATAAAACAGA...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAATCTGTTTTATGCTCTTaGTCCGCGCCTGCTTCCAAA +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKSVLCS*SAPASK
Trigger: TTTGGAAGCAGGCGCGGATCAAGAGCATAAAACAGA...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCAGATCTGCGCCTGCCTaGAGTAAGACATCTGCTACA +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFRSAPA*SKTSAT
Trigger: TGTAGCAGATGTCTTACTTCAGGCAGGCGCAGATCT...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCATCTGGTGGAGGGGCTaGAAGCAAGTTATTAGGATA +
Preference number: 4 (lower is better)
Translates to: MGNGQSQMFTENRSVSKIIWWRG*KQVIRI
Trigger: TATCCTAATAACTTGCTTTCAGCCCCTCCACCAGAT...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCGTGGGTAGGAGTGTTTaGCATTGCAGATGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFVGRSV*HCRCSS
Trigger: GGAAGAGCATCTGCAATGTCAAACACTCCTACCCAC...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCCTTGGAGTTGGAGTCTaGGGTTGGGAAATGGATGCA +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFLGVGV*GWEMDA
Trigger: TGCATCCATTTCCCAACCTCAGACTCCAACTCCAAG...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCACTTGGAGTTGGAGTCTaGGGTTGGGAAATGGATGCA +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSLGVGV*GWEMDA
Trigger: TGCATCCATTTCCCAACCTCAGACTCCAACTCCAAG...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAAGATAGGAAGCATGGCTaGAGGAGAGATGATAGGACT +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKDRKHG*RRDDRT
Trigger: AGTCCTATCATCTCTCCTTCAGCCATGCTTCCTATC...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAGTTAGTGCCGTGTCATaGTTACTCTCAGTCTGTGCA +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKVSAVS*LLSVCA
Trigger: TGCACAGACTGAGAGTAATCATGACACGGCACTAAC...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp ATACGGAGCATTTCAATCTATATCCCCTGGCCCCACAGGTTTGAAGTCAAGAAACCTGTTTTTCCTCTTTaGACTGGTTGTAGTTATGGT +
Preference number: 4 (lower is better)
Translates to: IRSISIYIPWPHRFEVKKPVFPL*TGCSYG
Trigger: ACCATAACTACAACCAGTTCAAAGAGGAAAAACAGG...TTTCTTGACTTCAAACCTGTGGGGCCAGGGGATATAGATTGAAATGCTCCGTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000358602.9
CDS-3UTR TCA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGTTCACCTTCTCTGGCTaGCTGTATGAAATTGGTAGT +
Preference number: 4 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKFTFSG*LYEIGS
Trigger: ACTACCAATTTCATACAGTCAGCCAGAGAAGGTGAA...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAACCACAGCTGGTGAATaGTTGTCACTCTTACGACTG +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKTTAGE*LSLLRL
Trigger: CAGTCGTAAGAGTGACAATCATTCACCAGCTGTGGT...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAAAGTGACCACAGCTGGTaGATGATTGTCACTCTTACG +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKSDHSW*MIVTLT
Trigger: CGTAAGAGTGACAATCATTCACCAGCTGTGGTCACT...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAAAGTGCTGTGGCAGTTTaGGATGTTGATGACAGAGCT +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKSAVAV*DVDDRA
Trigger: AGCTCTGTCATCAACATCTCAAACTGCCACAGCACT...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCCCTTCGGACAGAAGGTaGACTTGGACTGCCATTTGT +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFPSDRR*TWTAIC
Trigger: ACAAATGGCAGTCCAAGTTCACCTTCTGTCCGAAGG...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGATGTACTGAATTCTaGCAAGCACTTTGTGTACTT +
Preference number: 4 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEEGCTEF*QALCVL
Trigger: AAGTACACAAAGTGCTTGTCAGAATTCAGTACATCC...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAACATATTGACAATACCTaGGGGACTTGGAGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKHIDNT*GTWSRS
Trigger: AGACCTGCTCCAAGTCCCTCAGGTATTGTCAATATG...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAATGGCGAGTCCATATTaGCAATACCTGAGGGACTTG +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKMASPY*QYLRDL
Trigger: CAAGTCCCTCAGGTATTGTCAATATGGACTCGCCAT...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGGTTTCCCAAATGTGTTaGAGAAGGTGTTACAGAACC +
Preference number: 4 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKVSQMC*RRCYRT
Trigger: GGTTCTGTAACACCTTCTTCAACACATTTGGGAAAC...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCGGAACTTTCCTGTCCTaGGACACATTGCTGGGCTTT +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFGTFLS*DTLLGF
Trigger: AAAGCCCAGCAATGTGTCTCAGGACAGGAAAGTTCC...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAGCCACTATGTCCTACTaGTGTAGACAAATTGCTCCC +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKATMSY*CRQIAP
Trigger: GGGAGCAATTTGTCTACATCAGTAGGACATAGTGGC...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCCAGTCTACTTTGTCTTaGTTGCCACCAATCCCTTCA +
Preference number: 4 (lower is better)
Translates to: MGNGQSQMFTENRSVSKIQSTLS*LPPIPS
Trigger: TGAAGGGATTGGTGGCAATCAAGACAAAGTAGACTG...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGCATTGCTTGATGTTGTaGAAATACTCCTGGGTCAGA +
Preference number: 4 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKHCLML*KYSWVR
Trigger: TCTGACCCAGGAGTATTTTCACAACATCAAGCAATG...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCCCTGCAGGAACATGCTaGTGGAATGTACCAGAAGGA +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFPAGTC*WNVPEG
Trigger: TCCTTCTGGTACATTCCATCAGCATGTTCCTGCAGG...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCGAAGGGTCTGCAGCATaGGGGCCATTAAATATGGGT +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFEGSAA*GPLNMG
Trigger: ACCCATATTTAATGGCCCTCATGCTGCAGACCCTTC...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCCGACTGCCCTGCATTTaGTGTGCTTTCAGCTCTCAT +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFRLPCI*CAFSSH
Trigger: ATGAGAGCTGAAAGCACAGCAAATGCAGGGCAGTCG...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCACCCTGTTGCTGTTGTTaGATGAACGTTAGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSPCCCC*MNVSSC
Trigger: GCAGGAGCTAACGTTCATGCAACAACAGCAACAGGG...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTGCTGTATCCCCTGTTaGTGTTGTTGCATGAACGTT +
Preference number: 4 (lower is better)
Translates to: MGNGQSQMFTENRSVSKICCIPC*CCCMNV
Trigger: AACGTTCATGCAACAACAGCAACAGGGGATACAGCA...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCAAACAACCATGGGCAGTaGTTGAACTGGTACACGAGG +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSNNHGQ*LNWYTR
Trigger: CCTCGTGTACCAGTTCAAGCACTGCCCATGGTTGTT...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAACCTTTCTTGTCTCGGTaGTCTATACTAGCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKPFLSR*SILAPL
Trigger: GAGAGGAGCTAGTATAGAGCACCGAGACAAGAAAGG...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAACCTTTCTTGTCTCGGTaGTCTATACTAGCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKPFLSR*SILAPL
Trigger: GAGAGGAGCTAGTATAGAGCACCGAGACAAGAAAGG...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTTACCATGAGAACCTaGCAAAGTTGTCCAGGTTGC +
Preference number: 4 (lower is better)
Translates to: MGNGQSQMFTENRSVSKIFTMRT*QSCPGC
Trigger: GCAACCTGGACAACTTTGGCAGGTTCTCATGGTAAA...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCATCTCGCTGGTACTGCTaGTCTTGGACTCTCCATTCA +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSSRWYC*SWTLHS
Trigger: TGAATGGAGAGTCCAAGAGCAGCAGTACCAGCGAGA...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGTACTACTTTCATCGCTaGAGCTGGAAATCCTCATGT +
Preference number: 4 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKYYFHR*SWKSSC
Trigger: ACATGAGGATTTCCAGCTGCAGCGATGAAAGTAGTA...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCACCTTCTTCCCTCTTTTaGCCACGCTTAGGACTTGCT +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSPSSLF*PRLGLA
Trigger: AGCAAGTCCTAAGCGTGGGCAAAAGAGGGAAGAAGG...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCCCTTCTTCCCTCTTTTaGCCACGCTTAGGACTTGCT +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFPSSLF*PRLGLA
Trigger: AGCAAGTCCTAAGCGTGGGCAAAAGAGGGAAGAAGG...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAAGGATGCAGAAGAAATTaGAGGCACAGTGAGTGCTGT +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKGCRRN*RHSECC
Trigger: ACAGCACTCACTGTGCCTGCAATTTCTTCTGCATCC...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAGGATGCAGAAGAAATTaGAGGCACAGTGAGTGCTGT +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKGCRRN*RHSECC
Trigger: ACAGCACTCACTGTGCCTGCAATTTCTTCTGCATCC...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCGGTTTTGTGAGTGGATaGAGAAGAAATTGCAGGCAC +
Preference number: 4 (lower is better)
Translates to: MGNGQSQMFTENRSVSKIGFVSG*RRNCRH
Trigger: GTGCCTGCAATTTCTTCTGCATCCACTCACAAAACC...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAACACTGCTATTCTGATTaGTATGGCGAGGCACCATGT +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKHCYSD*YGEAPC
Trigger: ACATGGTGCCTCGCCATAGCAATCAGAATAGCAGTG...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAACACTGCTATTCTGATTaGTATGGCGAGGCACCATGT +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKHCYSD*YGEAPC
Trigger: ACATGGTGCCTCGCCATAGCAATCAGAATAGCAGTG...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAATGTGGCATTTGTGGGTaGAGTGTTGTTGTTGCTTGC +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKCGICG*SVVVAC
Trigger: GCAAGCAACAACAACACTGCACCCACAAATGCCACA...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAATGTGGCATTTGTGGGTaGAGTGTTGTTGTTGCTTGC +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKCGICG*SVVVAC
Trigger: GCAAGCAACAACAACACTGCACCCACAAATGCCACA...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCGCTGACGTTCCAGTTTaGCTGATACGTGCAGAACGT +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFADVPV*LIRAER
Trigger: ACGTTCTGCACGTATCAGGCAAACTGGAACGTCAGC...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCAGCTGACGTTCCAGTTTaGCTGATACGTGCAGAACGT +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSADVPV*LIRAER
Trigger: ACGTTCTGCACGTATCAGGCAAACTGGAACGTCAGC...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCCTTCAAAGGACCAGATaGCACTATGTCCTACTGATG +
Preference number: 4 (lower is better)
Translates to: MGNGQSQMFTENRSVSKILQRTR*HYVLLM
Trigger: CATCAGTAGGACATAGTGGCATCTGGTCCTTTGAAG...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCAAAGTCCATGTAGCCTaGAGGAACATGCTGATGGAA +
Preference number: 4 (lower is better)
Translates to: MGNGQSQMFTENRSVSKIKVHVA*RNMLME
Trigger: TTCCATCAGCATGTTCCTGCAGGCTACATGGACTTT...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAAGTTCCAAGAAGGGTCTaGAGCATGAGGGCCATTAAA +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKVPRRV*SMRAIK
Trigger: TTTAATGGCCCTCATGCTGCAGACCCTTCTTGGAAC...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAGTTCCAAGAAGGGTCTaGAGCATGAGGGCCATTAAA +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKVPRRV*SMRAIK
Trigger: TTTAATGGCCCTCATGCTGCAGACCCTTCTTGGAAC...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCTACATCCTGGCTGTTTaGTGGCAAATGGCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFYILAV*WQMAAG
Trigger: TCCAGCAGCCATTTGCCAGCAAACAGCCAGGATGTA...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAGCCAGTTCCAAGGACTaGAGCTGTGCATTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKASSKD*SCAFFS
Trigger: AGAAAAGAATGCACAGCTGCAGTCCTTGGAACTGGC...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCATCTCCCTCAGAAAGCTaGTCTCCAACTCCAACAGGA +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSSPSES*SPTPTG
Trigger: TCCTGTTGGAGTTGGAGAGCAGCTTTCTGAGGGAGA...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAACAGTTCTGTAAGATTTaGGATGGACCCTGGAGGCAA +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKQFCKI*DGPWRQ
Trigger: TTGCCTCCAGGGTCCATCGCAAATCTTACAGAACTG...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAACAGTTCTGTAAGATTTaGGATGGACCCTGGAGGCAA +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKQFCKI*DGPWRQ
Trigger: TTGCCTCCAGGGTCCATCGCAAATCTTACAGAACTG...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCTGCTCTTCCACTGACTaGTGCCATGATGTCATCCAG +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFCSSTD*CHDVIQ
Trigger: CTGGATGACATCATGGCAGCAGTCAGTGGAAGAGCA...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358602.9
ENST00000509867.6
CDS-3UTR CCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAATCTAGCCTGTGTTTCTaGATCTACTGTCCTGAGGTC +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKSSLCF*IYCPEV
Trigger: GACCTCAGGACAGTAGATCCAGAAACACAGGCTAGA...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCCTAGCTACTTCAACATaGCCATCCATGCAAGCCTCC +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFLATST*PSMQAS
Trigger: GGAGGCTTGCATGGATGGCCATGTTGAAGTAGCTAG...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCACTAGCTACTTCAACATaGCCATCCATGCAAGCCTCC +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSLATST*PSMQAS
Trigger: GGAGGCTTGCATGGATGGCCATGTTGAAGTAGCTAG...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCAGAGGTGGAACAACCATaGGCAGTGCTTGAACTGGTA +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSEVEQP*AVLELV
Trigger: TACCAGTTCAAGCACTGCCCATGGTTGTTCCACCTC...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGGATGCAGCAATACTGTaGGTAGGAGTGTTTGACATT +
Preference number: 4 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKDAAIL*VGVFDI
Trigger: AATGTCAAACACTCCTACCCACAGTATTGCTGCATC...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAATCTGAGGTTGGGAAATaGATGCAGCAATACTGTGGG +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKSEVGK*MQQYCG
Trigger: CCCACAGTATTGCTGCATCCATTTCCCAACCTCAGA...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAATCTGAGGTTGGGAAATaGATGCAGCAATACTGTGGG +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKSEVGK*MQQYCG
Trigger: CCCACAGTATTGCTGCATCCATTTCCCAACCTCAGA...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCGGCAGCCAAGATGAGTaGAGTAAAACCTTTCTTGTC +
Preference number: 4 (lower is better)
Translates to: MGNGQSQMFTENRSVSKIGSQDE*SKTFLV
Trigger: GACAAGAAAGGTTTTACTCCACTCATCTTGGCTGCC...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTGGTTCTTTCAGACTaGGCTTCAATGTCTGCACCA +
Preference number: 4 (lower is better)
Translates to: MGNGQSQMFTENRSVSKILVLSD*ASMSAP
Trigger: TGGTGCAGACATTGAAGCCCAGTCTGAAAGAACCAA...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGACTTCAGTTCTTCCTTaGAAGCAGGCTAAAGTAAGG +
Preference number: 4 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKTSVLP*KQAKVR
Trigger: CCTTACTTTAGCCTGCTTCCAAGGAAGAACTGAAGT...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAAAGTGGTTGTGGCACTTaGAGGTTCTGTCAAGACTTC +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKSGCGT*RFCQDF
Trigger: GAAGTCTTGACAGAACCTCCAAGTGCCACAACCACT...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAGTGGTTGTGGCACTTaGAGGTTCTGTCAAGACTTC +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKSGCGT*RFCQDF
Trigger: GAAGTCTTGACAGAACCTCCAAGTGCCACAACCACT...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAATGGTACTGCTGCTCTTaGACTCTCCATTCACCTTCT +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKWYCCS*TLHSPS
Trigger: AGAAGGTGAATGGAGAGTCCAAGAGCAGCAGTACCA...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGTTTCATCGCTGCAGCTaGAAATCCTCATGTTATCAC +
Preference number: 4 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKFHRCS*KSSCYH
Trigger: GTGATAACATGAGGATTTCCAGCTGCAGCGATGAAA...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGAGAAGAAAGGGGAGATaGACCAGATTTTGTACAAGT +
Preference number: 4 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEERRKGR*TRFCTS
Trigger: ACTTGTACAAAATCTGGTCCATCTCCCCTTTCTTCT...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAAGTACCTCCAAAGTaGGTCATGGGCAACCTTGGT +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKKVPPK*VMGNLG
Trigger: ACCAAGGTTGCCCATGACCCACTTTGGAGGTACTTT...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCAGTGGATTGAGCTGGTaGAAAAGTACCTCCAAAGTG +
Preference number: 4 (lower is better)
Translates to: MGNGQSQMFTENRSVSKISGLSW*KSTSKV
Trigger: CACTTTGGAGGTACTTTTCCACCAGCTCAATCCACT...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCCCAAGTGGATTGAGCTaGTGGAAAAGTACCTCCAAA +
Preference number: 4 (lower is better)
Translates to: MGNGQSQMFTENRSVSKIPSGLS*WKSTSK
Trigger: TTTGGAGGTACTTTTCCACCAGCTCAATCCACTTGG...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTGTTGTTTCTACTACTaGTGGACTACCTGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: MGNGQSQMFTENRSVSKICCFYY*WTTCFL
Trigger: CAGGAAGCAGGTAGTCCACCAGTAGTAGAAACAACA...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAAAGACTGCTGAAGAGGTaGTCTTGGTTCCTGAGAAAC +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKRLLKR*SWFLRN
Trigger: GTTTCTCAGGAACCAAGACCACCTCTTCAGCAGTCT...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAGACTGCTGAAGAGGTaGTCTTGGTTCCTGAGAAAC +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKRLLKR*SWFLRN
Trigger: GTTTCTCAGGAACCAAGACCACCTCTTCAGCAGTCT...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCAAGGTCGAAGGTAGCTaGACAGAAGAGGGAACACTG +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFKVEGS*TEEGTL
Trigger: CAGTGTTCCCTCTTCTGTCCAGCTACCTTCGACCTT...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCAAAGGTCGAAGGTAGCTaGACAGAAGAGGGAACACTG +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSKVEGS*TEEGTL
Trigger: CAGTGTTCCCTCTTCTGTCCAGCTACCTTCGACCTT...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCCCTGAGACACATTGCTaGGCTTTTCTGACCCTAACG +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFPETHC*AFLTLT
Trigger: CGTTAGGGTCAGAAAAGCCCAGCAATGTGTCTCAGG...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTCAGACATCGGTCTGTaGATCATAGGATTTCCCATC +
Preference number: 4 (lower is better)
Translates to: MGNGQSQMFTENRSVSKISDIGL*IIGFPI
Trigger: GATGGGAAATCCTATGATCCACAGACCGATGTCTGA...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAAAGGGATAGGTGCTACTaGAGGAATCATTGCATTCCC +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKRDRCY*RNHCIP
Trigger: GGGAATGCAATGATTCCTCCAGTAGCACCTATCCCT...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGGGCCATTATTTTCCGTaGAGCTGGAAACCATCTTTA +
Preference number: 4 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKGHYFP*SWKPSL
Trigger: TAAAGATGGTTTCCAGCTCCACGGAAAATAATGGCC...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAACCTCATCAGCCAAGCTaGTTCATATGCACACTGTTC +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKPHQPS*FICTLF
Trigger: GAACAGTGTGCATATGAACCAGCTTGGCTGATGAGG...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAACCTCATCAGCCAAGCTaGTTCATATGCACACTGTTC +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKPHQPS*FICTLF
Trigger: GAACAGTGTGCATATGAACCAGCTTGGCTGATGAGG...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCAATCCTGGCTGTTTGCTaGCAAATGGCTGCTGGACTT +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSILAVC*QMAAGL
Trigger: AAGTCCAGCAGCCATTTGCCAGCAAACAGCCAGGAT...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAAAGTAATCCCAGGTGTTaGCAAGACTGTTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKSNPRC*QDCCCC
Trigger: ACAGCAGCAACAGTCTTGCCAACACCTGGGATTACT...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGTTTTCCAAATCATCCTaGTCCAAAATGAAAGACTCC +
Preference number: 4 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEEFSKSS*SKMKDS
Trigger: GGAGTCTTTCATTTTGGATCAGGATGATTTGGAAAA...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCACACTTCGCCCTTCAATaGGTAACTTTCGCACAGCAT +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSHFALQ*VTFAQH
Trigger: ATGCTGTGCGAAAGTTACTCATTGAAGGGCGAAGTG...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCCACTTCGCCCTTCAATaGGTAACTTTCGCACAGCAT +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFHFALQ*VTFAQH
Trigger: ATGCTGTGCGAAAGTTACTCATTGAAGGGCGAAGTG...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTGCTGTATTGCCTGTTaGAGACTGTGCATTAACATC +
Preference number: 4 (lower is better)
Translates to: MGNGQSQMFTENRSVSKICCIAC*RLCINI
Trigger: GATGTTAATGCACAGTCTTCAACAGGCAATACAGCA...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTCCATAAGAGGGGTATaGCCATTTTCATTATGGTCC +
Preference number: 4 (lower is better)
Translates to: MGNGQSQMFTENRSVSKISIRGV*PFSLWS
Trigger: GGACCATAATGAAAATGGTCATACCCCTCTTATGGA...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTGATATTTGCTCCTTaGCCAAGAAGTAATGCCACC +
Preference number: 4 (lower is better)
Translates to: MGNGQSQMFTENRSVSKILIFAP*PRSNAT
Trigger: GGTGGCATTACTTCTTGGTCAAGGAGCAAATATCAA...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGTTCTATCAACATAGTTaGGCCATCTTTCAAACGGTG +
Preference number: 4 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKFYQHS*AIFQTV
Trigger: CACCGTTTGAAAGATGGCTCAACTATGTTGATAGAA...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAAATCTGGTGGAGGGGCTaGAAGCAAGTTATTAGGATA +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKIWWRG*KQVIRI
Trigger: TATCCTAATAACTTGCTTTCAGCCCCTCCACCAGAT...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCGATAGGAAGCATGGCTaGAGGAGAGATGATAGGACT +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFDRKHG*RRDDRT
Trigger: AGTCCTATCATCTCTCCTTCAGCCATGCTTCCTATC...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCAGATAGGAAGCATGGCTaGAGGAGAGATGATAGGACT +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSDRKHG*RRDDRT
Trigger: AGTCCTATCATCTCTCCTTCAGCCATGCTTCCTATC...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCAGTTAGTGCCGTGTCATaGTTACTCTCAGTCTGTGCA +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSVSAVS*LLSVCA
Trigger: TGCACAGACTGAGAGTAATCATGACACGGCACTAAC...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTACGTACATCAATATaGGCTCCCCTGCCAATAAGA +
Preference number: 4 (lower is better)
Translates to: MGNGQSQMFTENRSVSKILRTSI*APLPIR
Trigger: TCTTATTGGCAGGGGAGCTCATATTGATGTACGTAA...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAGACTCCATACAAAGATaGCACTTCTTCAGCATCTCC +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKDSIQR*HFFSIS
Trigger: GGAGATGCTGAAGAAGTGTCATCTTTGTATGGAGTC...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGTTTGGCTTGTACTATTaGCTCCATACAAAGATGACA +
Preference number: 4 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEEFGLYY*LHTKMT
Trigger: TGTCATCTTTGTATGGAGTCAATAGTACAAGCCAAA...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGTTATTTCTTTTACCATaGGAACCTGCCAAAGTTGTC +
Preference number: 4 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEELFLLP*EPAKVV
Trigger: GACAACTTTGGCAGGTTCTCATGGTAAAAGAAATAA...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCAACCACAGCTGGTGAATaGTTGTCACTCTTACGACTG +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSTTAGE*LSLLRL
Trigger: CAGTCGTAAGAGTGACAATCATTCACCAGCTGTGGT...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCACCACAGCTGGTGAATaGTTGTCACTCTTACGACTG +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFTTAGE*LSLLRL
Trigger: CAGTCGTAAGAGTGACAATCATTCACCAGCTGTGGT...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCAGTGACCACAGCTGGTaGATGATTGTCACTCTTACG +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFSDHSW*MIVTLT
Trigger: CGTAAGAGTGACAATCATTCACCAGCTGTGGTCACT...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAAATGTAACAAGAACTaGTGGCTGCTTTTTGCTGCT +
Preference number: 4 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKKCNKN*WLLFAA
Trigger: AGCAGCAAAAAGCAGCCATCAGTTCTTGTTACATTT...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCAGTGCTGTGGCAGTTTaGGATGTTGATGACAGAGCT +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFSAVAV*DVDDRA
Trigger: AGCTCTGTCATCAACATCTCAAACTGCCACAGCACT...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCATCTGCTGGAAAGTCTaGGCAGCAAGCAAAGCATGT +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFICWKV*AASKAC
Trigger: ACATGCTTTGCTTGCTGCTCAGACTTTCCAGCAGAT...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAATGGGGAAGATGGGGATaGTACTGGATAGTGTTCTTT +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKWGRWG*YWIVFF
Trigger: AAAGAACACTATCCAGTATCATCCCCATCTTCCCCA...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCGATTCTGGTGTTGACTaGGATGAAACAACAGATCCT +
Preference number: 4 (lower is better)
Translates to: MGNGQSQMFTENRSVSKIDSGVD*DETTDP
Trigger: AGGATCTGTTGTTTCATCTCAGTCAACACCAGAATC...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCACATATTGACAATACCTaGGGGACTTGGAGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSHIDNT*GTWSRS
Trigger: AGACCTGCTCCAAGTCCCTCAGGTATTGTCAATATG...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCCCAGGTCCGTACATCTaGCCTCCTGAAATGTTTGAA +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFPGPYI*PPEMFE
Trigger: TTCAAACATTTCAGGAGGTCAGATGTACGGACCTGG...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCACCAGGTCCGTACATCTaGCCTCCTGAAATGTTTGAA +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSPGPYI*PPEMFE
Trigger: TTCAAACATTTCAGGAGGTCAGATGTACGGACCTGG...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAACTCCCGAGGATACTaGCTGTGCAGAAGAATCATT +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKNSRGY*LCRRII
Trigger: AATGATTCTTCTGCACAGTCAGTATCCTCGGGAGTT...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAAAATAACAGATGGAGCTaGCGTTCCAGTTTGCCTGAT +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKNNRWS*RSSLPD
Trigger: ATCAGGCAAACTGGAACGTCAGCTCCATCTGTTATT...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
41% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCGCCACTATGTCCTACTaGTGTAGACAAATTGCTCCC +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFATMSY*CRQIAP
Trigger: GGGAGCAATTTGTCTACATCAGTAGGACATAGTGGC...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAACAGTCTACTTTGTCTTaGTTGCCACCAATCCCTTCA +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKQSTLS*LPPIPS
Trigger: TGAAGGGATTGGTGGCAATCAAGACAAAGTAGACTG...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCCATTGCTTGATGTTGTaGAAATACTCCTGGGTCAGA +
Preference number: 4 (lower is better)
Translates to: MGNGQSQMFTENRSVSKIHCLML*KYSWVR
Trigger: TCTGACCCAGGAGTATTTTCACAACATCAAGCAATG...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAAAACCATCTTTATCAGTaGGTTCCAAGAAGGGTCTGC +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKNHLYQ*VPRRVC
Trigger: GCAGACCCTTCTTGGAACTCACTGATAAAGATGGTT...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
41% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCAAAGCAGCTTTATTCCTaGTGGGAAGAGTGGTGGCAA +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSKQLYS*WEEWWQ
Trigger: TTGCCACCACTCTTCCCATCAGGAATAAAGCTGCTT...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCAAGCAGCTTTATTCCTaGTGGGAAGAGTGGTGGCAA +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFKQLYS*WEEWWQ
Trigger: TTGCCACCACTCTTCCCATCAGGAATAAAGCTGCTT...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCACTGGAGACTGATTGGTaGTGTAACCCTGTACATCCT +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSLETDW*CNPVHP
Trigger: AGGATGTACAGGGTTACATCACCAATCAGTCTCCAG...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCCTGGAGACTGATTGGTaGTGTAACCCTGTACATCCT +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFLETDW*CNPVHP
Trigger: AGGATGTACAGGGTTACATCACCAATCAGTCTCCAG...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAATCTGTTAACTTTCCCTaGGCCTCTTCTACAATGCTC +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKSVNFP*ASSTML
Trigger: GAGCATTGTAGAAGAGGCTCAGGGAAAGTTAACAGA...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTGTACTAAACAAGCCTaGTCCCCAAGACTAAATACG +
Preference number: 4 (lower is better)
Translates to: MGNGQSQMFTENRSVSKICTKQA*SPRLNT
Trigger: CGTATTTAGTCTTGGGGATCAGGCTTGTTTAGTACA...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358602.9
CDS-3UTR GCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCAGGTTGGGAAATGGATaGAGCAATACTGTGGGTAGG +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFRLGNG*SNTVGR
Trigger: CCTACCCACAGTATTGCTGCATCCATTTCCCAACCT...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCAAGGTTGGGAAATGGATaGAGCAATACTGTGGGTAGG +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSRLGNG*SNTVGR
Trigger: CCTACCCACAGTATTGCTGCATCCATTTCCCAACCT...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGATTACTCTCAGTCTGTaGATCAATATCAATGGCAGG +
Preference number: 4 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKITLSL*ININGR
Trigger: CCTGCCATTGATATTGATGCACAGACTGAGAGTAAT...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCCCTTTCTTGTCTCGGTaGTCTATACTAGCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFPFLSR*SILAPL
Trigger: GAGAGGAGCTAGTATAGAGCACCGAGACAAGAAAGG...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAACTGGGCTTCAATGTCTaGACCATTGTCCAGCAATAT +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKLGFNV*TIVQQY
Trigger: ATATTGCTGGACAATGGTGCAGACATTGAAGCCCAG...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGCAAAGTTGTCCAGGTTaGAGATATACCTATGGTAGT +
Preference number: 4 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKQSCPG*RYTYGS
Trigger: ACTACCATAGGTATATCTGCAACCTGGACAACTTTG...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTCTTACGACTGCTGTTaGTGTTACTACTTTCATCGC +
Preference number: 4 (lower is better)
Translates to: MGNGQSQMFTENRSVSKISYDCC*CYYFHR
Trigger: GCGATGAAAGTAGTAACAGCAACAGCAGTCGTAAGA...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGTGTCACTCTTACGACTaGTGTTGCTGTTACTACTTT +
Preference number: 4 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKCHSYD*CCCYYF
Trigger: AAAGTAGTAACAGCAACAGCAGTCGTAAGAGTGACA...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAACAAGAACTGATGGCTaGTTTTTGCTGCTCACAGTG +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKTRTDG*FLLLTV
Trigger: CACTGTGAGCAGCAAAAAGCAGCCATCAGTTCTTGT...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGATCAATATCTATGTGTaGACCAGTAAACTCCCGAAT +
Preference number: 4 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEEINIYV*TSKLPN
Trigger: ATTCGGGAGTTTACTGGTGCACACATAGATATTGAT...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCGGATGCAGAAGAAATTaGAGGCACAGTGAGTGCTGT +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFGCRRN*RHSECC
Trigger: ACAGCACTCACTGTGCCTGCAATTTCTTCTGCATCC...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAGGTTTTGTGAGTGGATaGAGAAGAAATTGCAGGCAC +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKGFVSG*RRNCRH
Trigger: GTGCCTGCAATTTCTTCTGCATCCACTCACAAAACC...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAAGGTTTTGTGAGTGGATaGAGAAGAAATTGCAGGCAC +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKGFVSG*RRNCRH
Trigger: GTGCCTGCAATTTCTTCTGCATCCACTCACAAAACC...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCCACTGCTATTCTGATTaGTATGGCGAGGCACCATGT +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFHCYSD*YGEAPC
Trigger: ACATGGTGCCTCGCCATAGCAATCAGAATAGCAGTG...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAATCACCTGAGAACCACTaGTATTCTGATTGCTATGGC +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKSPENH*YSDCYG
Trigger: GCCATAGCAATCAGAATAGCAGTGGTTCTCAGGTGA...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAACTGTGACAAAAAGCTaGCTTCGGACAGAAGGTGAA +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKTVTKS*LRTEGE
Trigger: TTCACCTTCTGTCCGAAGGCAGCTTTTTGTCACAGT...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAAAGTTTGCCTGATACGTaGAGAACGTTCAGTCCCAAT +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKSLPDT*RTFSPN
Trigger: ATTGGGACTGAACGTTCTGCACGTATCAGGCAAACT...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAACTTCAAAGGACCAGATaGCACTATGTCCTACTGATG +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKLQRTR*HYVLLM
Trigger: CATCAGTAGGACATAGTGGCATCTGGTCCTTTGAAG...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAAAAAGTCCATGTAGCCTaGAGGAACATGCTGATGGAA +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKKVHVA*RNMLME
Trigger: TTCCATCAGCATGTTCCTGCAGGCTACATGGACTTT...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
41% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCACCATCAGGGATAGGTaGTACTGGAGGAATCATTGC +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFTIRDR*YWRNHC
Trigger: GCAATGATTCCTCCAGTAGCACCTATCCCTGATGGT...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCAACCATCAGGGATAGGTaGTACTGGAGGAATCATTGC +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSTIRDR*YWRNHC
Trigger: GCAATGATTCCTCCAGTAGCACCTATCCCTGATGGT...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCAGTTCCAAGAAGGGTCTaGAGCATGAGGGCCATTAAA +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSVPRRV*SMRAIK
Trigger: TTTAATGGCCCTCATGCTGCAGACCCTTCTTGGAAC...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGTTAGTAAGATCTTCTaGAAAAAGCCTACACACTTC +
Preference number: 4 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEEVSKIF*KKPTHF
Trigger: GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAAC...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGCTAAATTTCCGTGTTTaGTCAGAAGCAGTTTACAGT +
Preference number: 4 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEELNFRV*SEAVYS
Trigger: ACTGTAAACTGCTTCTGAGCAAACACGGAAATTTAG...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCGCCAGTTCCAAGGACTaGAGCTGTGCATTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFASSKD*SCAFFS
Trigger: AGAAAAGAATGCACAGCTGCAGTCCTTGGAACTGGC...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGCTGTTTCCAGCATTaGATTTTCCAAATCATCCTG +
Preference number: 4 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKSCFQH*IFQIIL
Trigger: CAGGATGATTTGGAAAATCCAATGCTGGAAACAGCT...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCTCTAGCCTGTGTTTCTaGATCTACTGTCCTGAGGTC +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFSSLCF*IYCPEV
Trigger: GACCTCAGGACAGTAGATCCAGAAACACAGGCTAGA...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAATTTCTAGCAGCAATCTaGCTACTTCCACATGTCCAG +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKFLAAI*LLPHVQ
Trigger: CTGGACATGTGGAAGTAGCCAGATTGCTGCTAGAAA...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGACAGTACAGTATaGTCATTATTAGCTGTGGTT +
Preference number: 4 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKRDSTV*SLLAVV
Trigger: AACCACAGCTAATAATGACCATACTGTACTGTCCCT...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAAAGAGATGATAGGACTTaGAGTTGGAGTCTGAGGTTG +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKRDDRT*SWSLRL
Trigger: CAACCTCAGACTCCAACTCCAAGTCCTATCATCTCT...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAAGGCAGCCAAGATGAGTaGAGTAAAACCTTTCTTGTC +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKGSQDE*SKTFLV
Trigger: GACAAGAAAGGTTTTACTCCACTCATCTTGGCTGCC...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAATTGGTTCTTTCAGACTaGGCTTCAATGTCTGCACCA +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKLVLSD*ASMSAP
Trigger: TGGTGCAGACATTGAAGCCCAGTCTGAAAGAACCAA...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCAGTGGTTGTGGCACTTaGAGGTTCTGTCAAGACTTC +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFSGCGT*RFCQDF
Trigger: GAAGTCTTGACAGAACCTCCAAGTGCCACAACCACT...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCATGGTACTGCTGCTCTTaGACTCTCCATTCACCTTCT +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSWYCCS*TLHSPS
Trigger: AGAAGGTGAATGGAGAGTCCAAGAGCAGCAGTACCA...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCAAAAGTACCTCCAAAGTaGGTCATGGGCAACCTTGGT +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSKVPPK*VMGNLG
Trigger: ACCAAGGTTGCCCATGACCCACTTTGGAGGTACTTT...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAGTGGATTGAGCTGGTaGAAAAGTACCTCCAAAGTG +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKSGLSW*KSTSKV
Trigger: CACTTTGGAGGTACTTTTCCACCAGCTCAATCCACT...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAGATATGTGGCATTTGTaGGTGCAGTGTTGTTGTTGC +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKDMWHL*VQCCCC
Trigger: GCAACAACAACACTGCACCCACAAATGCCACATATC...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAATGTTTCTACTACTGGTaGACTACCTGCTTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKCFYYW*TTCFLF
Trigger: GAACAGGAAGCAGGTAGTCCACCAGTAGTAGAAACA...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAATGTTGTTTCTACTACTaGTGGACTACCTGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKCCFYY*WTTCFL
Trigger: CAGGAAGCAGGTAGTCCACCAGTAGTAGAAACAACA...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCAGAACTGCTGCTGTTTaGAGGTCTAGTGTTTGTTGT +
Preference number: 4 (lower is better)
Translates to: MGNGQSQMFTENRSVSKIRTAAV*RSSVCC
Trigger: ACAACAAACACTAGACCTCCAAACAGCAGCAGTTCT...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCAAGACTGCTGAAGAGGTaGTCTTGGTTCCTGAGAAAC +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSRLLKR*SWFLRN
Trigger: GTTTCTCAGGAACCAAGACCACCTCTTCAGCAGTCT...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTGGTGGTCTAAAACCTaGAGCTTTGGAAGTATCAGA +
Preference number: 4 (lower is better)
Translates to: MGNGQSQMFTENRSVSKIWWSKT*SFGSIR
Trigger: TCTGATACTTCCAAAGCTCCAGGTTTTAGACCACCA...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGTGTTACAGAACCATATaGCGAGTCCATATTGACAAT +
Preference number: 4 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEECYRTI*RVHIDN
Trigger: ATTGTCAATATGGACTCGCCATATGGTTCTGTAACA...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGTATTTTCCGTGGAGCTaGAAACCATCTTTATCAGTG +
Preference number: 4 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKYFPWS*KPSLSV
Trigger: CACTGATAAAGATGGTTTCCAGCTCCACGGAAAATA...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCGGCCATTATTTTCCGTaGAGCTGGAAACCATCTTTA +
Preference number: 4 (lower is better)
Translates to: MGNGQSQMFTENRSVSKIGHYFP*SWKPSL
Trigger: TAAAGATGGTTTCCAGCTCCACGGAAAATAATGGCC...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCACCTCATCAGCCAAGCTaGTTCATATGCACACTGTTC +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSPHQPS*FICTLF
Trigger: GAACAGTGTGCATATGAACCAGCTTGGCTGATGAGG...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAGATGATGATGGGGAATaGGCAGTCACAAATGTTCAC +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKDDDGE*AVTNVH
Trigger: GTGAACATTTGTGACTGCCCATTCCCCATCATCATC...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAAGATGATGATGGGGAATaGGCAGTCACAAATGTTCAC +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKDDDGE*AVTNVH
Trigger: GTGAACATTTGTGACTGCCCATTCCCCATCATCATC...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGTTCTACAATGCTCTCTaGAGACTGATTGGTGATGTA +
Preference number: 4 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKFYNAL*RLIGDV
Trigger: TACATCACCAATCAGTCTCCAGAGAGCATTGTAGAA...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCAGTAATCCCAGGTGTTaGCAAGACTGTTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFSNPRC*QDCCCC
Trigger: ACAGCAGCAACAGTCTTGCCAACACCTGGGATTACT...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCCTTGTATATGCTGACTaGGAACAGTGGTGGCTTTTT +
Preference number: 4 (lower is better)
Translates to: MGNGQSQMFTENRSVSKILVYAD*EQWWLF
Trigger: AAAAAGCCACCACTGTTCCCAGTCAGCATATACAAG...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358602.9
ENST00000558247.5
CDS-3UTR TCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAACATCCTGATCCAAAATaGAAGACTCCACCTCAGAAA +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKHPDPK*KTPPQK
Trigger: TTTCTGAGGTGGAGTCTTTCATTTTGGATCAGGATG...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000558247.5
CDS-3UTR TCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAATGCTGTATTGCCTGTTaGAGACTGTGCATTAACATC +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKCCIAC*RLCINI
Trigger: GATGTTAATGCACAGTCTTCAACAGGCAATACAGCA...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAATCCATAAGAGGGGTATaGCCATTTTCATTATGGTCC +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKSIRGV*PFSLWS
Trigger: GGACCATAATGAAAATGGTCATACCCCTCTTATGGA...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAATTGATATTTGCTCCTTaGCCAAGAAGTAATGCCACC +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKLIFAP*PRSNAT
Trigger: GGTGGCATTACTTCTTGGTCAAGGAGCAAATATCAA...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTATCAACATAGTTaGGCCATCTTTCAAACGGTG +
Preference number: 4 (lower is better)
Translates to: MGNGQSQMFTENRSVSKIFYQHS*AIFQTV
Trigger: CACCGTTTGAAAGATGGCTCAACTATGTTGATAGAA...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCAATCTGGTGGAGGGGCTaGAAGCAAGTTATTAGGATA +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSIWWRG*KQVIRI
Trigger: TATCCTAATAACTTGCTTTCAGCCCCTCCACCAGAT...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAATTACGTACATCAATATaGGCTCCCCTGCCAATAAGA +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKLRTSI*APLPIR
Trigger: TCTTATTGGCAGGGGAGCTCATATTGATGTACGTAA...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGGAATCTGATGGAAACTaGTTGACTTCTTTGACTAAG +
Preference number: 4 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKESDGN*LTSLTK
Trigger: CTTAGTCAAAGAAGTCAATCAGTTTCCATCAGATTC...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCAGACTCCATACAAAGATaGCACTTCTTCAGCATCTCC +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSDSIQR*HFFSIS
Trigger: GGAGATGCTGAAGAAGTGTCATCTTTGTATGGAGTC...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGTTTGGCTTGTACTATTaGCTCCATACAAAGATGACA +
Preference number: 4 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKFGLYY*LHTKMT
Trigger: TGTCATCTTTGTATGGAGTCAATAGTACAAGCCAAA...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGTTATTTCTTTTACCATaGGAACCTGCCAAAGTTGTC +
Preference number: 4 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKLFLLP*EPAKVV
Trigger: GACAACTTTGGCAGGTTCTCATGGTAAAAGAAATAA...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCCCTGTTTTTCCTCTTTaGACTGGTTGTAGTTATGGT +
Preference number: 4 (lower is better)
Translates to: MGNGQSQMFTENRSVSKIPVFPL*TGCSYG
Trigger: ACCATAACTACAACCAGTTCAAAGAGGAAAAACAGG...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAATTCACCTTCTCTGGCTaGCTGTATGAAATTGGTAGT +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKFTFSG*LYEIGS
Trigger: ACTACCAATTTCATACAGTCAGCCAGAGAAGGTGAA...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCAAATGTAACAAGAACTaGTGGCTGCTTTTTGCTGCT +
Preference number: 4 (lower is better)
Translates to: MGNGQSQMFTENRSVSKIKCNKN*WLLFAA
Trigger: AGCAGCAAAAAGCAGCCATCAGTTCTTGTTACATTT...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCAGTTGCTTGTCTTGTTaGTTCAGTGCCACCCCTTAT +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFSCLSC*FSATPY
Trigger: ATAAGGGGTGGCACTGAATCAACAAGACAAGCAACT...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCATGGGGAAGATGGGGATaGTACTGGATAGTGTTCTTT +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSWGRWG*YWIVFF
Trigger: AAAGAACACTATCCAGTATCATCCCCATCTTCCCCA...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAGTTTCCCAAATGTGTTaGAGAAGGTGTTACAGAACC +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKVSQMC*RRCYRT
Trigger: GGTTCTGTAACACCTTCTTCAACACATTTGGGAAAC...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAAGTTTCCCAAATGTGTTaGAGAAGGTGTTACAGAACC +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKVSQMC*RRCYRT
Trigger: GGTTCTGTAACACCTTCTTCAACACATTTGGGAAAC...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCAAACTCCCGAGGATACTaGCTGTGCAGAAGAATCATT +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSNSRGY*LCRRII
Trigger: AATGATTCTTCTGCACAGTCAGTATCCTCGGGAGTT...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCAAATAACAGATGGAGCTaGCGTTCCAGTTTGCCTGAT +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSNNRWS*RSSLPD
Trigger: ATCAGGCAAACTGGAACGTCAGCTCCATCTGTTATT...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCACAGTCTACTTTGTCTTaGTTGCCACCAATCCCTTCA +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSQSTLS*LPPIPS
Trigger: TGAAGGGATTGGTGGCAATCAAGACAAAGTAGACTG...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAATCTCGCTCCATTGCTTaGTGTTGTGAAAATACTCCT +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKSRSIA*CCENTP
Trigger: AGGAGTATTTTCACAACATCAAGCAATGGAGCGAGA...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAATCTCGCTCCATTGCTTaGTGTTGTGAAAATACTCCT +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKSRSIA*CCENTP
Trigger: AGGAGTATTTTCACAACATCAAGCAATGGAGCGAGA...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCAAACCATCTTTATCAGTaGGTTCCAAGAAGGGTCTGC +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSNHLYQ*VPRRVC
Trigger: GCAGACCCTTCTTGGAACTCACTGATAAAGATGGTT...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTTTTCGGCCACTTGTaGTTTCCTCCAAATGAAAAG +
Preference number: 4 (lower is better)
Translates to: MGNGQSQMFTENRSVSKIFFGHL*FPPNEK
Trigger: CTTTTCATTTGGAGGAAATCACAAGTGGCCGAAAAA...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCCTGGCCCCACAGGTTTaGAGTCAAGAAAATATAGGA +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFLAPQV*SQENIG
Trigger: TCCTATATTTTCTTGACTTCAAACCTGTGGGGCCAG...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000358602.9
CDS-3UTR GCA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCCCTATCTTCCACATTTaGATGCATTGCCAACAAAAC +
Preference number: 4 (lower is better)
Translates to: MGNGQSQMFTENRSVSKIPIFHI*MHCQQN
Trigger: GTTTTGTTGGCAATGCATGCAAATGTGGAAGATAGG...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGTTAAATTCATTAGAATaGGTATTAATGCCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEELNSLE*VLMPAP
Trigger: TGGGGCTGGCATTAATACGCATTCTAATGAATTTAA...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAATGTCCTTCTCGAGCTaGTTCCATCAATGGTGTATA +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKMSFSS*FHQWCI
Trigger: TATACACCATTGATGGAAGCAGCTCGAGAAGGACAT...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCATGCTGTATCCCCTGTTaGTGTTGTTGCATGAACGTT +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSCCIPC*CCCMNV
Trigger: AACGTTCATGCAACAACAGCAACAGGGGATACAGCA...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCATTACTCTCAGTCTGTaGATCAATATCAATGGCAGG +
Preference number: 4 (lower is better)
Translates to: MGNGQSQMFTENRSVSKIITLSL*ININGR
Trigger: CCTGCCATTGATATTGATGCACAGACTGAGAGTAAT...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCACTGGGCTTCAATGTCTaGACCATTGTCCAGCAATAT +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSLGFNV*TIVQQY
Trigger: ATATTGCTGGACAATGGTGCAGACATTGAAGCCCAG...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCAACATCAGAGGAGAGATaGCCAATTTGCTACCAGTTC +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSTSEER*PICYQF
Trigger: GAACTGGTAGCAAATTGGGCATCTCTCCTCTGATGT...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAATTAACAGCAGCTGTATaGCCATTCATAGCTGCTAAC +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKLTAAV*PFIAAN
Trigger: GTTAGCAGCTATGAATGGGCATACAGCTGCTGTTAA...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCTTTACCATGAGAACCTaGCAAAGTTGTCCAGGTTGC +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFFTMRT*QSCPGC
Trigger: GCAACCTGGACAACTTTGGCAGGTTCTCATGGTAAA...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAATACTACTTTCATCGCTaGAGCTGGAAATCCTCATGT +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKYYFHR*SWKSSC
Trigger: ACATGAGGATTTCCAGCTGCAGCGATGAAAGTAGTA...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAATCTTACGACTGCTGTTaGTGTTACTACTTTCATCGC +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKSYDCC*CYYFHR
Trigger: GCGATGAAAGTAGTAACAGCAACAGCAGTCGTAAGA...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCATCACCTGAGAACCACTaGTATTCTGATTGCTATGGC +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSSPENH*YSDCYG
Trigger: GCCATAGCAATCAGAATAGCAGTGGTTCTCAGGTGA...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCACTGTGACAAAAAGCTaGCTTCGGACAGAAGGTGAA +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFTVTKS*LRTEGE
Trigger: TTCACCTTCTGTCCGAAGGCAGCTTTTTGTCACAGT...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCAGTTTGCCTGATACGTaGAGAACGTTCAGTCCCAAT +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFSLPDT*RTFSPN
Trigger: ATTGGGACTGAACGTTCTGCACGTATCAGGCAAACT...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCACTTCAAAGGACCAGATaGCACTATGTCCTACTGATG +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSLQRTR*HYVLLM
Trigger: CATCAGTAGGACATAGTGGCATCTGGTCCTTTGAAG...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCAAAGTCCATGTAGCCTaGAGGAACATGCTGATGGAA +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFKVHVA*RNMLME
Trigger: TTCCATCAGCATGTTCCTGCAGGCTACATGGACTTT...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGGTTAGTAAGATCTTCTaGAAAAAGCCTACACACTTC +
Preference number: 4 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKVSKIF*KKPTHF
Trigger: GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAAC...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGCTAAATTTCCGTGTTTaGTCAGAAGCAGTTTACAGT +
Preference number: 4 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKLNFRV*SEAVYS
Trigger: ACTGTAAACTGCTTCTGAGCAAACACGGAAATTTAG...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAACCAACTATCACTCCTTaGAGTTCTGTAAGATTTGCG +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKPTITP*SSVRFA
Trigger: CGCAAATCTTACAGAACTGCAAGGAGTGATAGTTGG...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAACCAACTATCACTCCTTaGAGTTCTGTAAGATTTGCG +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKPTITP*SSVRFA
Trigger: CGCAAATCTTACAGAACTGCAAGGAGTGATAGTTGG...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCAGCTGTTTCCAGCATTaGATTTTCCAAATCATCCTG +
Preference number: 4 (lower is better)
Translates to: MGNGQSQMFTENRSVSKISCFQH*IFQIIL
Trigger: CAGGATGATTTGGAAAATCCAATGCTGGAAACAGCT...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAACTGATAAGAGCAACTTaGAAGCTGTTTCCAGCATTG +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKLIRAT*KLFPAL
Trigger: CAATGCTGGAAACAGCTTCCAAGTTGCTCTTATCAG...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCATTTCTAGCAGCAATCTaGCTACTTCCACATGTCCAG +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSFLAAI*LLPHVQ
Trigger: CTGGACATGTGGAAGTAGCCAGATTGCTGCTAGAAA...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCTTTCTAGCAGCAATCTaGCTACTTCCACATGTCCAG +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFFLAAI*LLPHVQ
Trigger: CTGGACATGTGGAAGTAGCCAGATTGCTGCTAGAAA...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCAGGGACAGTACAGTATaGTCATTATTAGCTGTGGTT +
Preference number: 4 (lower is better)
Translates to: MGNGQSQMFTENRSVSKIRDSTV*SLLAVV
Trigger: AACCACAGCTAATAATGACCATACTGTACTGTCCCT...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAACAAACAACACTTGTATaGCCACCTTTTGCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKQTTLV*PPFAAS
Trigger: AGAAGCAGCAAAAGGTGGCCATACAAGTGTTGTTTG...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAACAAACAACACTTGTATaGCCACCTTTTGCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKQTTLV*PPFAAS
Trigger: AGAAGCAGCAAAAGGTGGCCATACAAGTGTTGTTTG...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCGATAGGACTTGGAGTTaGAGTCTGAGGTTGGGAAAT +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFDRTWS*SLRLGN
Trigger: ATTTCCCAACCTCAGACTCCAACTCCAAGTCCTATC...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCAGAGATGATAGGACTTaGAGTTGGAGTCTGAGGTTG +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFRDDRT*SWSLRL
Trigger: CAACCTCAGACTCCAACTCCAAGTCCTATCATCTCT...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCAGGCAGCCAAGATGAGTaGAGTAAAACCTTTCTTGTC +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSGSQDE*SKTFLV
Trigger: GACAAGAAAGGTTTTACTCCACTCATCTTGGCTGCC...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCTTGGTTCTTTCAGACTaGGCTTCAATGTCTGCACCA +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFLVLSD*ASMSAP
Trigger: TGGTGCAGACATTGAAGCCCAGTCTGAAAGAACCAA...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAAACTTCAGTTCTTCCTTaGAAGCAGGCTAAAGTAAGG +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKTSVLP*KQAKVR
Trigger: CCTTACTTTAGCCTGCTTCCAAGGAAGAACTGAAGT...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAACAGCCTGTCTATCTTTaGCTTGTACTATTGACTCCA +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKQPVYL*LVLLTP
Trigger: TGGAGTCAATAGTACAAGCCAAAGATAGACAGGCTG...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAATTTCATCGCTGCAGCTaGAAATCCTCATGTTATCAC +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKFHRCS*KSSCYH
Trigger: GTGATAACATGAGGATTTCCAGCTGCAGCGATGAAA...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCAGAAGAAAGGGGAGATaGACCAGATTTTGTACAAGT +
Preference number: 4 (lower is better)
Translates to: MGNGQSQMFTENRSVSKIRRKGR*TRFCTS
Trigger: ACTTGTACAAAATCTGGTCCATCTCCCCTTTCTTCT...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCAGTGGATTGAGCTGGTaGAAAAGTACCTCCAAAGTG +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFSGLSW*KSTSKV
Trigger: CACTTTGGAGGTACTTTTCCACCAGCTCAATCCACT...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCACCAAGTGGATTGAGCTaGTGGAAAAGTACCTCCAAA +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSPSGLS*WKSTSK
Trigger: TTTGGAGGTACTTTTCCACCAGCTCAATCCACTTGG...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCAGATATGTGGCATTTGTaGGTGCAGTGTTGTTGTTGC +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSDMWHL*VQCCCC
Trigger: GCAACAACAACACTGCACCCACAAATGCCACATATC...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCTGTTTCTACTACTGGTaGACTACCTGCTTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFCFYYW*TTCFLF
Trigger: GAACAGGAAGCAGGTAGTCCACCAGTAGTAGAAACA...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCTGTTGTTTCTACTACTaGTGGACTACCTGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFCCFYY*WTTCFL
Trigger: CAGGAAGCAGGTAGTCCACCAGTAGTAGAAACAACA...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCATGTTGTTTCTACTACTaGTGGACTACCTGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSCCFYY*WTTCFL
Trigger: CAGGAAGCAGGTAGTCCACCAGTAGTAGAAACAACA...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAAAGAACTGCTGCTGTTTaGAGGTCTAGTGTTTGTTGT +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKRTAAV*RSSVCC
Trigger: ACAACAAACACTAGACCTCCAAACAGCAGCAGTTCT...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAATGGTGGTCTAAAACCTaGAGCTTTGGAAGTATCAGA +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKWWSKT*SFGSIR
Trigger: TCTGATACTTCCAAAGCTCCAGGTTTTAGACCACCA...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAATGGTGGTCTAAAACCTaGAGCTTTGGAAGTATCAGA +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKWWSKT*SFGSIR
Trigger: TCTGATACTTCCAAAGCTCCAGGTTTTAGACCACCA...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGTGTTACAGAACCATATaGCGAGTCCATATTGACAAT +
Preference number: 4 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKCYRTI*RVHIDN
Trigger: ATTGTCAATATGGACTCGCCATATGGTTCTGTAACA...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCATCAGACATCGGTCTGTaGATCATAGGATTTCCCATC +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSSDIGL*IIGFPI
Trigger: GATGGGAAATCCTATGATCCACAGACCGATGTCTGA...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCTCAGACATCGGTCTGTaGATCATAGGATTTCCCATC +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFSDIGL*IIGFPI
Trigger: GATGGGAAATCCTATGATCCACAGACCGATGTCTGA...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTATTTTCCGTGGAGCTaGAAACCATCTTTATCAGTG +
Preference number: 4 (lower is better)
Translates to: MGNGQSQMFTENRSVSKIYFPWS*KPSLSV
Trigger: CACTGATAAAGATGGTTTCCAGCTCCACGGAAAATA...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAGGCCATTATTTTCCGTaGAGCTGGAAACCATCTTTA +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKGHYFP*SWKPSL
Trigger: TAAAGATGGTTTCCAGCTCCACGGAAAATAATGGCC...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCCATCCTGATCCAAAATaGAAGACTCCACCTCAGAAA +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFHPDPK*KTPPQK
Trigger: TTTCTGAGGTGGAGTCTTTCATTTTGGATCAGGATG...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000558247.5
CDS-3UTR TCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCATCCATAAGAGGGGTATaGCCATTTTCATTATGGTCC +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSSIRGV*PFSLWS
Trigger: GGACCATAATGAAAATGGTCATACCCCTCTTATGGA...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCTTGATATTTGCTCCTTaGCCAAGAAGTAATGCCACC +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFLIFAP*PRSNAT
Trigger: GGTGGCATTACTTCTTGGTCAAGGAGCAAATATCAA...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCTTACGTACATCAATATaGGCTCCCCTGCCAATAAGA +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFLRTSI*APLPIR
Trigger: TCTTATTGGCAGGGGAGCTCATATTGATGTACGTAA...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAACCTGTTTTTCCTCTTTaGACTGGTTGTAGTTATGGT +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKPVFPL*TGCSYG
Trigger: ACCATAACTACAACCAGTTCAAAGAGGAAAAACAGG...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAATGTAACAAGAACTaGTGGCTGCTTTTTGCTGCT +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKKCNKN*WLLFAA
Trigger: AGCAGCAAAAAGCAGCCATCAGTTCTTGTTACATTT...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
39% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAGGATGTACTGAATTCTaGCAAGCACTTTGTGTACTT +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKGCTEF*QALCVL
Trigger: AAGTACACAAAGTGCTTGTCAGAATTCAGTACATCC...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAAGGATGTACTGAATTCTaGCAAGCACTTTGTGTACTT +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKGCTEF*QALCVL
Trigger: AAGTACACAAAGTGCTTGTCAGAATTCAGTACATCC...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCAGATTCTGGTGTTGACTaGGATGAAACAACAGATCCT +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSDSGVD*DETTDP
Trigger: AGGATCTGTTGTTTCATCTCAGTCAACACCAGAATC...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCGATTCTGGTGTTGACTaGGATGAAACAACAGATCCT +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFDSGVD*DETTDP
Trigger: AGGATCTGTTGTTTCATCTCAGTCAACACCAGAATC...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCCATTGCTTGATGTTGTaGAAATACTCCTGGGTCAGA +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFHCLML*KYSWVR
Trigger: TCTGACCCAGGAGTATTTTCACAACATCAAGCAATG...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCTCTCGCTCCATTGCTTaGTGTTGTGAAAATACTCCT +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFSRSIA*CCENTP
Trigger: AGGAGTATTTTCACAACATCAAGCAATGGAGCGAGA...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCATCTCGCTCCATTGCTTaGTGTTGTGAAAATACTCCT +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSSRSIA*CCENTP
Trigger: AGGAGTATTTTCACAACATCAAGCAATGGAGCGAGA...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAATTTTTCGGCCACTTGTaGTTTCCTCCAAATGAAAAG +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKFFGHL*FPPNEK
Trigger: CTTTTCATTTGGAGGAAATCACAAGTGGCCGAAAAA...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCATGGGGATTTAAGGTGTaGACTAACCCAAGTGTAATG +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSWGFKV*TNPSVM
Trigger: CATTACACTTGGGTTAGTTCACACCTTAAATCCCCA...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000358602.9
CDS-3UTR TCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAATTTCTTACTGCACTATaGTTAGATCATTGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKFLTAL*LDHCQQ
Trigger: CTGCTGGCAATGATCTAATCATAGTGCAGTAAGAAA...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509867.6
CDS-3UTR GCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAATCTTCCACATTTGCATaGATTGCCAACAAAACCTGT +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKSSTFA*IANKTC
Trigger: ACAGGTTTTGTTGGCAATGCATGCAAATGTGGAAGA...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAATCTTCCACATTTGCATaGATTGCCAACAAAACCTGT +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKSSTFA*IANKTC
Trigger: ACAGGTTTTGTTGGCAATGCATGCAAATGTGGAAGA...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAACCTATCTTCCACATTTaGATGCATTGCCAACAAAAC +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKPIFHI*MHCQQN
Trigger: GTTTTGTTGGCAATGCATGCAAATGTGGAAGATAGG...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAACCTATCTTCCACATTTaGATGCATTGCCAACAAAAC +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKPIFHI*MHCQQN
Trigger: GTTTTGTTGGCAATGCATGCAAATGTGGAAGATAGG...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCATGTCCTTCTCGAGCTaGTTCCATCAATGGTGTATA +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFMSFSS*FHQWCI
Trigger: TATACACCATTGATGGAAGCAGCTCGAGAAGGACAT...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCTTAACAGCAGCTGTATaGCCATTCATAGCTGCTAAC +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFLTAAV*PFIAAN
Trigger: GTTAGCAGCTATGAATGGGCATACAGCTGCTGTTAA...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCACTCCTCTAACAAAATaGTGGCGTTTTTGTTTGCTT +
Preference number: 4 (lower is better)
Translates to: MGNGQSQMFTENRSVSKITPLTK*WRFCLL
Trigger: AAGCAAACAAAAACGCCAGCATTTTGTTAGAGGAGT...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCTACTACTTTCATCGCTaGAGCTGGAAATCCTCATGT +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFYYFHR*SWKSSC
Trigger: ACATGAGGATTTCCAGCTGCAGCGATGAAAGTAGTA...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCTCTTACGACTGCTGTTaGTGTTACTACTTTCATCGC +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFSYDCC*CYYFHR
Trigger: GCGATGAAAGTAGTAACAGCAACAGCAGTCGTAAGA...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCATCTTACGACTGCTGTTaGTGTTACTACTTTCATCGC +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSSYDCC*CYYFHR
Trigger: GCGATGAAAGTAGTAACAGCAACAGCAGTCGTAAGA...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAATGTCACTCTTACGACTaGTGTTGCTGTTACTACTTT +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKCHSYD*CCCYYF
Trigger: AAAGTAGTAACAGCAACAGCAGTCGTAAGAGTGACA...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAATGTCACTCTTACGACTaGTGTTGCTGTTACTACTTT +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKCHSYD*CCCYYF
Trigger: AAAGTAGTAACAGCAACAGCAGTCGTAAGAGTGACA...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCACCAACTATCACTCCTTaGAGTTCTGTAAGATTTGCG +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSPTITP*SSVRFA
Trigger: CGCAAATCTTACAGAACTGCAAGGAGTGATAGTTGG...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAGCTGTTTCCAGCATTaGATTTTCCAAATCATCCTG +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKSCFQH*IFQIIL
Trigger: CAGGATGATTTGGAAAATCCAATGCTGGAAACAGCT...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCCTGATAAGAGCAACTTaGAAGCTGTTTCCAGCATTG +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFLIRAT*KLFPAL
Trigger: CAATGCTGGAAACAGCTTCCAAGTTGCTCTTATCAG...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAAAGGGACAGTACAGTATaGTCATTATTAGCTGTGGTT +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKRDSTV*SLLAVV
Trigger: AACCACAGCTAATAATGACCATACTGTACTGTCCCT...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCACAAACAACACTTGTATaGCCACCTTTTGCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSQTTLV*PPFAAS
Trigger: AGAAGCAGCAAAAGGTGGCCATACAAGTGTTGTTTG...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCGATGCAGCAATACTGTaGGTAGGAGTGTTTGACATT +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFDAAIL*VGVFDI
Trigger: AATGTCAAACACTCCTACCCACAGTATTGCTGCATC...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCACTTCAGTTCTTCCTTaGAAGCAGGCTAAAGTAAGG +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFTSVLP*KQAKVR
Trigger: CCTTACTTTAGCCTGCTTCCAAGGAAGAACTGAAGT...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCCAGCCTGTCTATCTTTaGCTTGTACTATTGACTCCA +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFQPVYL*LVLLTP
Trigger: TGGAGTCAATAGTACAAGCCAAAGATAGACAGGCTG...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCACAGCCTGTCTATCTTTaGCTTGTACTATTGACTCCA +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSQPVYL*LVLLTP
Trigger: TGGAGTCAATAGTACAAGCCAAAGATAGACAGGCTG...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAATTCTACAATGCTCTCTaGAGACTGATTGGTGATGTA +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKFYNAL*RLIGDV
Trigger: TACATCACCAATCAGTCTCCAGAGAGCATTGTAGAA...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAATTCTACAATGCTCTCTaGAGACTGATTGGTGATGTA +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKFYNAL*RLIGDV
Trigger: TACATCACCAATCAGTCTCCAGAGAGCATTGTAGAA...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCCTTGTATATGCTGACTaGGAACAGTGGTGGCTTTTT +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFLVYAD*EQWWLF
Trigger: AAAAAGCCACCACTGTTCCCAGTCAGCATATACAAG...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358602.9
ENST00000558247.5
CDS-3UTR TCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCTTCTATCAACATAGTTaGGCCATCTTTCAAACGGTG +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFFYQHS*AIFQTV
Trigger: CACCGTTTGAAAGATGGCTCAACTATGTTGATAGAA...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAAGAATCTGATGGAAACTaGTTGACTTCTTTGACTAAG +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKESDGN*LTSLTK
Trigger: CTTAGTCAAAGAAGTCAATCAGTTTCCATCAGATTC...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAATTATTTCTTTTACCATaGGAACCTGCCAAAGTTGTC +
Preference number: 4 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKLFLLP*EPAKVV
Trigger: GACAACTTTGGCAGGTTCTCATGGTAAAAGAAATAA...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCACCTGTTTTTCCTCTTTaGACTGGTTGTAGTTATGGT +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSPVFPL*TGCSYG
Trigger: ACCATAACTACAACCAGTTCAAAGAGGAAAAACAGG...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCAAATGTAACAAGAACTaGTGGCTGCTTTTTGCTGCT +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFKCNKN*WLLFAA
Trigger: AGCAGCAAAAAGCAGCCATCAGTTCTTGTTACATTT...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCTCTTCCACATTTGCATaGATTGCCAACAAAACCTGT +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFSSTFA*IANKTC
Trigger: ACAGGTTTTGTTGGCAATGCATGCAAATGTGGAAGA...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCCCTATCTTCCACATTTaGATGCATTGCCAACAAAAC +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFPIFHI*MHCQQN
Trigger: GTTTTGTTGGCAATGCATGCAAATGTGGAAGATAGG...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTAAATTCATTAGAATaGGTATTAATGCCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: MGNGQSQMFTENRSVSKILNSLE*VLMPAP
Trigger: TGGGGCTGGCATTAATACGCATTCTAATGAATTTAA...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAAACTCCTCTAACAAAATaGTGGCGTTTTTGTTTGCTT +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKTPLTK*WRFCLL
Trigger: AAGCAAACAAAAACGCCAGCATTTTGTTAGAGGAGT...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
38% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCACAAAGTTGTCCAGGTTaGAGATATACCTATGGTAGT +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSQSCPG*RYTYGS
Trigger: ACTACCATAGGTATATCTGCAACCTGGACAACTTTG...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAAATCAATATCTATGTGTaGACCAGTAAACTCCCGAAT +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKINIYV*TSKLPN
Trigger: ATTCGGGAGTTTACTGGTGCACACATAGATATTGAT...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCAAGCTGTTTCCAGCATTaGATTTTCCAAATCATCCTG +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSSCFQH*IFQIIL
Trigger: CAGGATGATTTGGAAAATCCAATGCTGGAAACAGCT...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCAGGGACAGTACAGTATaGTCATTATTAGCTGTGGTT +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFRDSTV*SLLAVV
Trigger: AACCACAGCTAATAATGACCATACTGTACTGTCCCT...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCAAGAAGAAAGGGGAGATaGACCAGATTTTGTACAAGT +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSRRKGR*TRFCTS
Trigger: ACTTGTACAAAATCTGGTCCATCTCCCCTTTCTTCT...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCATTTTCCAAATCATCCTaGTCCAAAATGAAAGACTCC +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSFSKSS*SKMKDS
Trigger: GGAGTCTTTCATTTTGGATCAGGATGATTTGGAAAA...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCGAATCTGATGGAAACTaGTTGACTTCTTTGACTAAG +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFESDGN*LTSLTK
Trigger: CTTAGTCAAAGAAGTCAATCAGTTTCCATCAGATTC...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCTTTGGCTTGTACTATTaGCTCCATACAAAGATGACA +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFFGLYY*LHTKMT
Trigger: TGTCATCTTTGTATGGAGTCAATAGTACAAGCCAAA...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR TCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCTTATTTCTTTTACCATaGGAACCTGCCAAAGTTGTC +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFLFLLP*EPAKVV
Trigger: GACAACTTTGGCAGGTTCTCATGGTAAAAGAAATAA...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAATTAAATTCATTAGAATaGGTATTAATGCCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: QRTASTESYVQRGRGKEKLNSLE*VLMPAP
Trigger: TGGGGCTGGCATTAATACGCATTCTAATGAATTTAA...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCAACTCCTCTAACAAAATaGTGGCGTTTTTGTTTGCTT +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSTPLTK*WRFCLL
Trigger: AAGCAAACAAAAACGCCAGCATTTTGTTAGAGGAGT...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCAATCAATATCTATGTGTaGACCAGTAAACTCCCGAAT +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSINIYV*TSKLPN
Trigger: ATTCGGGAGTTTACTGGTGCACACATAGATATTGAT...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCAGTTAGTAAGATCTTCTaGAAAAAGCCTACACACTTC +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSVSKIF*KKPTHF
Trigger: GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAAC...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCCTAAATTTCCGTGTTTaGTCAGAAGCAGTTTACAGT +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFLNFRV*SEAVYS
Trigger: ACTGTAAACTGCTTCTGAGCAAACACGGAAATTTAG...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCACTAAATTTCCGTGTTTaGTCAGAAGCAGTTTACAGT +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSLNFRV*SEAVYS
Trigger: ACTGTAAACTGCTTCTGAGCAAACACGGAAATTTAG...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCATGTTACAGAACCATATaGCGAGTCCATATTGACAAT +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSCYRTI*RVHIDN
Trigger: ATTGTCAATATGGACTCGCCATATGGTTCTGTAACA...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR GCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCTTAAATTCATTAGAATaGGTATTAATGCCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFLNSLE*VLMPAP
Trigger: TGGGGCTGGCATTAATACGCATTCTAATGAATTTAA...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CCA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCAGACTTCTAAAACCATaGTATTGTACTAAACAAGCC +
Preference number: 4 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFRLLKP*YCTKQA
Trigger: GGCTTGTTTAGTACAATACCATGGTTTTAGAAGTCT...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000358602.9
CDS-3UTR CCA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCAGAGTCAAAACACGGATaGACTATTATTTTTGTGAAG +
Preference number: 4 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSESKHG*TIIFVK
Trigger: CTTCACAAAAATAATAGTCCATCCGTGTTTTGACTC...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000358602.9
CDS GCA 90 bp CGCAGACTCGCACCATCCCACGAGGAGACGAGGCCGAGCGAGCTCTaGTGCTGCCGCCAACGCCGCCGCCGACCTCCGCCGCCGCGGGGG +
Preference number: 5 (lower is better)
Translates to: RRLAPSHEETRPSEL*CCRQRRRRPPPPRG
Trigger: CCCCCGCGGCGGCGGAGGTCGGCGGCGGCGTTGGCGGCAGCAGCAGAGCTCGCTCGGCCTCGTCTCCTCGTGGGATGGTGCGAGTCTGCG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000561029.1
ENST00000639793.1
CDS GCA 90 bp GGGGGTCGGCAAGTCCGGTTACGCTTGGCCTTGTGGTGCTGCTGCTaGGGCGGCTTCTTCTTCAGGAGCAGGTCGCAGACTCGCACCATC +
Preference number: 5 (lower is better)
Translates to: GGRQVRLRLALWCCC*GGFFFRSRSQTRTI
Trigger: GATGGTGCGAGTCTGCGACCTGCTCCTGAAGAAGAAGCCGCCGCAGCAGCAGCACCACAAGGCCAAGCGTAACCGGACTTGCCGACCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000561029.1
ENST00000639793.1
CDS GCA 90 bp TTGCAGTTCTGTAAGATTTGCGATGGACCCTGGAGGCAAGGGACCTaGCGCCAGAGGCAAAGCTTGAGGCATCGCCAGAGGCTGGATTGG +
Preference number: 5 (lower is better)
Translates to: LQFCKICDGPWRQGT*RQRQSLRHRQRLDW
Trigger: CCAATCCAGCCTCTGGCGATGCCTCAAGCTTTGCCTCTGGCGGCAGGTCCCTTGCCTCCAGGGTCCATCGCAAATCTTACAGAACTGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000514252.1
ENST00000558247.5
ENST00000561029.1
ENST00000639793.1
CDS CCA 90 bp ACCTGCCGCCAGAGGCAAAGCTTGAGGCATCGCCAGAGGCTGGATTaGCGCAAAACCCATCTGAGCAGCAGTCTGCTGGGGTTCATCTTT +
Preference number: 5 (lower is better)
Translates to: TCRQRQSLRHRQRLD*RKTHLSSSLLGFIF
Trigger: AAAGATGAACCCCAGCAGACTGCTGCTCAGATGGGTTTTGCGCCAATCCAGCCTCTGGCGATGCCTCAAGCTTTGCCTCTGGCGGCAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000514252.1
ENST00000558247.5
ENST00000561029.1
ENST00000639793.1
CDS TCA 90 bp CTGGCAGGGCTCAAAGGCCTGACAGGAAACGGACCCCAAGTGGATTaGGCTGGTGGAAAAGTACCTCCAAAGTGGGTCATGGGCAACCTT +
Preference number: 5 (lower is better)
Translates to: LAGLKGLTGNGPQVD*AGGKVPPKWVMGNL
Trigger: AAGGTTGCCCATGACCCACTTTGGAGGTACTTTTCCACCAGCTCAATCCACTTGGGGTCCGTTTCCTGTCAGGCCTTTGAGCCCTGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS GCA 90 bp CAGTACTGGCTGTCCAACTATCACTCCTTGCAGTTCTGTAAGATTTaGGATGGACCCTGGAGGCAAGGGACCTGCCGCCAGAGGCAAAGC +
Preference number: 5 (lower is better)
Translates to: QYWLSNYHSLQFCKI*DGPWRQGTCRQRQS
Trigger: GCTTTGCCTCTGGCGGCAGGTCCCTTGCCTCCAGGGTCCATCGCAAATCTTACAGAACTGCAAGGAGTGATAGTTGGACAGCCAGTACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000514252.1
ENST00000558247.5
ENST00000561029.1
ENST00000639793.1
CDS CCA 90 bp AAGAGTGGTGGCAACATTGGCAGGTGGTTTGTCAGGCTCCTGAGGTaGAACAACCATGGGCAGTGCTTGAACTGGTACACGAGGAGCCCT +
Preference number: 5 (lower is better)
Translates to: KSGGNIGRWFVRLLR*NNHGQCLNWYTRSP
Trigger: AGGGCTCCTCGTGTACCAGTTCAAGCACTGCCCATGGTTGTTCCACCTCAGGAGCCTGACAAACCACCTGCCAATGTTGCCACCACTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000514252.1
ENST00000558247.5
ENST00000639793.1
CDS CCA 90 bp GCTCAAAGGCCTGACAGGAAACGGACCCCAAGTGGATTGAGCTGGTaGAAAAGTACCTCCAAAGTGGGTCATGGGCAACCTTGGTGGACG +
Preference number: 5 (lower is better)
Translates to: AQRPDRKRTPSGLSW*KSTSKVGHGQPWWT
Trigger: CGTCCACCAAGGTTGCCCATGACCCACTTTGGAGGTACTTTTCCACCAGCTCAATCCACTTGGGGTCCGTTTCCTGTCAGGCCTTTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS CCA 90 bp AGGGCTCAAAGGCCTGACAGGAAACGGACCCCAAGTGGATTGAGCTaGTGGAAAAGTACCTCCAAAGTGGGTCATGGGCAACCTTGGTGG +
Preference number: 5 (lower is better)
Translates to: RAQRPDRKRTPSGLS*WKSTSKVGHGQPWW
Trigger: CCACCAAGGTTGCCCATGACCCACTTTGGAGGTACTTTTCCACCAGCTCAATCCACTTGGGGTCCGTTTCCTGTCAGGCCTTTGAGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS CCA 90 bp TCCAACTATCACTCCTTGCAGTTCTGTAAGATTTGCGATGGACCCTaGAGGCAAGGGACCTGCCGCCAGAGGCAAAGCTTGAGGCATCGC +
Preference number: 5 (lower is better)
Translates to: SNYHSLQFCKICDGP*RQGTCRQRQSLRHR
Trigger: GCGATGCCTCAAGCTTTGCCTCTGGCGGCAGGTCCCTTGCCTCCAGGGTCCATCGCAAATCTTACAGAACTGCAAGGAGTGATAGTTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000514252.1
ENST00000558247.5
ENST00000561029.1
ENST00000639793.1
CDS TCA 90 bp GCAGCTGCGGGTGCTCCTCCAAGGGGTGCCCCAGGTCCGTACATCTaGCCTCCTGAAATGTTTGAAGCAAAGTTTCCCAAATGTGTTGAA +
Preference number: 5 (lower is better)
Translates to: AAAGAPPRGAPGPYI*PPEMFEAKFPKCVE
Trigger: TTCAACACATTTGGGAAACTTTGCTTCAAACATTTCAGGAGGTCAGATGTACGGACCTGGGGCACCCCTTGGAGGAGCACCCGCAGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS CCA 90 bp GACTGCTTTATTCCTGATGGGAAGAGTGGTGGCAACATTGGCAGGTaGTTTGTCAGGCTCCTGAGGTGGAACAACCATGGGCAGTGCTTG +
Preference number: 5 (lower is better)
Translates to: DCFIPDGKSGGNIGR*FVRLLRWNNHGQCL
Trigger: CAAGCACTGCCCATGGTTGTTCCACCTCAGGAGCCTGACAAACCACCTGCCAATGTTGCCACCACTCTTCCCATCAGGAATAAAGCAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330838.10
CDS CCA 90 bp AGCTGGTGGAAAAGTACCTCCAAAGTGGGTCATGGGCAACCTTGGTaGACGGATCTGCTGGAAAGTCTGAGCAGCAAGCAAAGCATGTGC +
Preference number: 5 (lower is better)
Translates to: SWWKSTSKVGHGQPW*TDLLESLSSKQSMC
Trigger: GCACATGCTTTGCTTGCTGCTCAGACTTTCCAGCAGATCCGTCCACCAAGGTTGCCCATGACCCACTTTGGAGGTACTTTTCCACCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS CCA 90 bp CCCAAGTGGATTGAGCTGGTGGAAAAGTACCTCCAAAGTGGGTCATaGGCAACCTTGGTGGACGGATCTGCTGGAAAGTCTGAGCAGCAA +
Preference number: 5 (lower is better)
Translates to: PKWIELVEKYLQSGS*ATLVDGSAGKSEQQ
Trigger: TTGCTGCTCAGACTTTCCAGCAGATCCGTCCACCAAGGTTGCCCATGACCCACTTTGGAGGTACTTTTCCACCAGCTCAATCCACTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS CCA 90 bp AGCAGCTTTATTCCTGATGGGAAGAGTGGTGGCAACATTGGCAGGTaGTTTGTCAGGCTCCTGAGGTGGAACAACCATGGGCAGTGCTTG +
Preference number: 5 (lower is better)
Translates to: SSFIPDGKSGGNIGR*FVRLLRWNNHGQCL
Trigger: CAAGCACTGCCCATGGTTGTTCCACCTCAGGAGCCTGACAAACCACCTGCCAATGTTGCCACCACTCTTCCCATCAGGAATAAAGCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000514252.1
ENST00000558247.5
ENST00000639793.1
CDS TCA 90 bp CCACTGACTGCTGCCATGATGTCATCCAGCGTGTCATTGAGGGTCTaGGCAGGGCTGGCTACCATTAACCCTTGTTGTGTTTCTGTCAGA +
Preference number: 5 (lower is better)
Translates to: PLTAAMMSSSVSLRV*AGLATINPCCVSVR
Trigger: TCTGACAGAAACACAACAAGGGTTAATGGTAGCCAGCCCTGCTCAGACCCTCAATGACACGCTGGATGACATCATGGCAGCAGTCAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000514252.1
ENST00000639793.1
CDS CCA 90 bp TTGAGCTGGTGGAAAAGTACCTCCAAAGTGGGTCATGGGCAACCTTaGTGGACGGATCTGCTGGAAAGTCTGAGCAGCAAGCAAAGCATG +
Preference number: 5 (lower is better)
Translates to: LSWWKSTSKVGHGQP*WTDLLESLSSKQSM
Trigger: CATGCTTTGCTTGCTGCTCAGACTTTCCAGCAGATCCGTCCACCAAGGTTGCCCATGACCCACTTTGGAGGTACTTTTCCACCAGCTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGCGGTTACGCTTGGCCTaGTGGTGCTGCTGCTGCGGC +
Preference number: 5 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKRLRLA*WCCCCG
Trigger: GCCGCAGCAGCAGCACCACAAGGCCAAGCGTAACCG...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330838.10
ENST00000358602.9
CDS TCA 90 bp CTTCCACTGACTGCCATGATGTCATCCAGCGTGTCATTGAGGGTCTaGGCAGGGCTGGCTACCATTAACCCTTGTTGTGTTTCTGTCAGA +
Preference number: 5 (lower is better)
Translates to: LPLTAMMSSSVSLRV*AGLATINPCCVSVR
Trigger: TCTGACAGAAACACAACAAGGGTTAATGGTAGCCAGCCCTGCTCAGACCCTCAATGACACGCTGGATGACATCATGGCAGTCAGTGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558247.5
ENST00000561029.1
CDS CCA 90 bp CAACATTGGCAGGTGGTTTGTCAGGCTCCTGAGGTGGAACAACCATaGGCAGTGCTTGAACTGGTACACGAGGAGCCCTATTTAAATCGT +
Preference number: 5 (lower is better)
Translates to: QHWQVVCQAPEVEQP*AVLELVHEEPYLNR
Trigger: ACGATTTAAATAGGGCTCCTCGTGTACCAGTTCAAGCACTGCCCATGGTTGTTCCACCTCAGGAGCCTGACAAACCACCTGCCAATGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000514252.1
ENST00000558247.5
ENST00000639793.1
CDS CCA 90 bp TCTAACTTCCGGGGGAGGAACCTGAGACTGCTGAAGAGGTGGTCTTaGTTCCTGAGAAACAGATCCCGGAGGTTGTTGCTGATTAGAATG +
Preference number: 5 (lower is better)
Translates to: SNFRGRNLRLLKRWS*FLRNRSRRLLLIRM
Trigger: CATTCTAATCAGCAACAACCTCCGGGATCTGTTTCTCAGGAACCAAGACCACCTCTTCAGCAGTCTCAGGTTCCTCCCCCGGAAGTTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS CCA 90 bp AGTCATTCTAACTTCCGGGGGAGGAACCTGAGACTGCTGAAGAGGTaGTCTTGGTTCCTGAGAAACAGATCCCGGAGGTTGTTGCTGATT +
Preference number: 5 (lower is better)
Translates to: SHSNFRGRNLRLLKR*SWFLRNRSRRLLLI
Trigger: AATCAGCAACAACCTCCGGGATCTGTTTCTCAGGAACCAAGACCACCTCTTCAGCAGTCTCAGGTTCCTCCCCCGGAAGTTAGAATGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGGTCATGGGCAACCTaGGTGGACGGATCTGCTGGA +
Preference number: 5 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEEGSWAT*VDGSAG
Trigger: TCCAGCAGATCCGTCCACCAAGGTTGCCCATGACCC...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS TCA 90 bp ACTTTCCCTGAGCCTCTTCTACAATGCTCTCTGGAGACTGATTGGTaGTGTAACCCTGTACATCCTGGCTGTTTGCTGGCAAATGGCTGC +
Preference number: 5 (lower is better)
Translates to: TFPEPLLQCSLETDW*CNPVHPGCLLANGC
Trigger: GCAGCCATTTGCCAGCAAACAGCCAGGATGTACAGGGTTACATCACCAATCAGTCTCCAGAGAGCATTGTAGAAGAGGCTCAGGGAAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000514252.1
ENST00000558247.5
ENST00000561029.1
ENST00000639793.1
CDS CCA 90 bp CACTCTTACGACTGCTGTTGCTGTTACTACTTTCATCGCTGCAGCTaGAAATCCTCATGTTATCACTGTCCCCACTCTCGCTGGTACTGC +
Preference number: 5 (lower is better)
Translates to: HSYDCCCCYYFHRCS*KSSCYHCPHSRWYC
Trigger: GCAGTACCAGCGAGAGTGGGGACAGTGATAACATGAGGATTTCCAGCTGCAGCGATGAAAGTAGTAACAGCAACAGCAGTCGTAAGAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000513908.1
ENST00000558247.5
CDS-3UTR CAA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAACGGTTACGCTTGGCCTaGTGGTGCTGCTGCTGCGGC +
Preference number: 5 (lower is better)
Translates to: QRTASTESYVQRGRGKEKRLRLA*WCCCCG
Trigger: GCCGCAGCAGCAGCACCACAAGGCCAAGCGTAACCG...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330838.10
ENST00000358602.9
CDS-3UTR CAA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCCCCTGCCAACTGTGCTaGGCCCAGTACTGGCTGTCC +
Preference number: 5 (lower is better)
Translates to: MGNGQSQMFTENRSVSKIPCQLC*AQYWLS
Trigger: GGACAGCCAGTACTGGGCCAAGCACAGTTGGCAGGG...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS TCA 90 bp GGAAGCATGGCTGAAGGAGAGATGATAGGACTTGGAGTTGGAGTCTaGGGTTGGGAAATGGATGCAGCAATACTGTGGGTAGGAGTGTTT +
Preference number: 5 (lower is better)
Translates to: GSMAEGEMIGLGVGV*GWEMDAAILWVGVF
Trigger: AAACACTCCTACCCACAGTATTGCTGCATCCATTTCCCAACCTCAGACTCCAACTCCAAGTCCTATCATCTCTCCTTCAGCCATGCTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000514252.1
ENST00000558247.5
ENST00000561029.1
ENST00000639793.1
CDS TCA 90 bp CTGGAAACCATCTTTATCAGTGAGTTCCAAGAAGGGTCTGCAGCATaGGGGCCATTAAATATGGGTCCTCCAGCACCATCAGGGATAGGT +
Preference number: 5 (lower is better)
Translates to: LETIFISEFQEGSAA*GPLNMGPPAPSGIG
Trigger: ACCTATCCCTGATGGTGCTGGAGGACCCATATTTAATGGCCCTCATGCTGCAGACCCTTCTTGGAACTCACTGATAAAGATGGTTTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS TCA 90 bp CTGAGGTTGGGAAATGGATGCAGCAATACTGTGGGTAGGAGTGTTTaGCATTGCAGATGCTCTTCCACTGACTGCTGCCATGATGTCATC +
Preference number: 5 (lower is better)
Translates to: LRLGNGCSNTVGRSV*HCRCSSTDCCHDVI
Trigger: GATGACATCATGGCAGCAGTCAGTGGAAGAGCATCTGCAATGTCAAACACTCCTACCCACAGTATTGCTGCATCCATTTCCCAACCTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000514252.1
ENST00000639793.1
CDS TCA 90 bp CTGAGGTTGGGAAATGGATGCAGCAATACTGTGGGTAGGAGTGTTTaGCATTGCAGATGCTCTTCCACTGACTGCCATGATGTCATCCAG +
Preference number: 5 (lower is better)
Translates to: LRLGNGCSNTVGRSV*HCRCSSTDCHDVIQ
Trigger: CTGGATGACATCATGGCAGTCAGTGGAAGAGCATCTGCAATGTCAAACACTCCTACCCACAGTATTGCTGCATCCATTTCCCAACCTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558247.5
ENST00000561029.1
CDS GCA 90 bp TGGAAATCCTCATGTTATCACTGTCCCCACTCTCGCTGGTACTGCTaGTCTTGGACTCTCCATTCACCTTCTCTGGCTGACTGTATGAAA +
Preference number: 5 (lower is better)
Translates to: WKSSCYHCPHSRWYC*SWTLHSPSLADCMK
Trigger: TTTCATACAGTCAGCCAGAGAAGGTGAATGGAGAGTCCAAGAGCAGCAGTACCAGCGAGAGTGGGGACAGTGATAACATGAGGATTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000513908.1
ENST00000558247.5
CDS GCA 90 bp GATTGTCACTCTTACGACTGCTGTTGCTGTTACTACTTTCATCGCTaGAGCTGGAAATCCTCATGTTATCACTGTCCCCACTCTCGCTGG +
Preference number: 5 (lower is better)
Translates to: DCHSYDCCCCYYFHR*SWKSSCYHCPHSRW
Trigger: CCAGCGAGAGTGGGGACAGTGATAACATGAGGATTTCCAGCTGCAGCGATGAAAGTAGTAACAGCAACAGCAGTCGTAAGAGTGACAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000513908.1
ENST00000558247.5
CDS GCA 90 bp AGGCATAGGATATGTGGCATTTGTGGGTGCAGTGTTGTTGTTGCTTaGCGTGGTTGTGACTGTTGTTGTGGTGGCATTGGATGTCTTCAC +
Preference number: 5 (lower is better)
Translates to: RHRICGICGCSVVVA*RGCDCCCGGIGCLH
Trigger: GTGAAGACATCCAATGCCACCACAACAACAGTCACAACCACGGCAAGCAACAACAACACTGCACCCACAAATGCCACATATCCTATGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS GCA 90 bp GGGTCCTCCAGCACCATCAGGGATAGGTGCTACTGGAGGAATCATTaGATTCCCATACACAGAAAAAGGCATACCCCCAACTTTAGGAAA +
Preference number: 5 (lower is better)
Translates to: GSSSTIRDRCYWRNH*IPIHRKRHTPNFRK
Trigger: TTTCCTAAAGTTGGGGGTATGCCTTTTTCTGTGTATGGGAATGCAATGATTCCTCCAGTAGCACCTATCCCTGATGGTGCTGGAGGACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS CCA 90 bp TCCTCATGTTATCACTGTCCCCACTCTCGCTGGTACTGCTGCTCTTaGACTCTCCATTCACCTTCTCTGGCTGACTGTATGAAATTGGTA +
Preference number: 5 (lower is better)
Translates to: SSCYHCPHSRWYCCS*TLHSPSLADCMKLV
Trigger: TACCAATTTCATACAGTCAGCCAGAGAAGGTGAATGGAGAGTCCAAGAGCAGCAGTACCAGCGAGAGTGGGGACAGTGATAACATGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000513908.1
ENST00000558247.5
CDS CCA 90 bp GCCATTAAATATGGGTCCTCCAGCACCATCAGGGATAGGTGCTACTaGAGGAATCATTGCATTCCCATACACAGAAAAAGGCATACCCCC +
Preference number: 5 (lower is better)
Translates to: AIKYGSSSTIRDRCY*RNHCIPIHRKRHTP
Trigger: GGGGGTATGCCTTTTTCTGTGTATGGGAATGCAATGATTCCTCCAGTAGCACCTATCCCTGATGGTGCTGGAGGACCCATATTTAATGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCCAAGTCCGGTTACGCTaGGCCTTGTGGTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: MGNGQSQMFTENRSVSKIQVRLR*ALWCCC
Trigger: GCAGCAGCACCACAAGGCCAAGCGTAACCGGACTTG...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330838.10
ENST00000358602.9
CDS-3UTR CAA 90 bp ATACGGAGCATTTCAATCTATATCCCCTGGCCCCACAGGTTTGAAGTCAAGAAATCTGCCAAACTGCGGTaGTCCGACTGCCCTGCATTT +
Preference number: 5 (lower is better)
Translates to: IRSISIYIPWPHRFEVKKSAKLR*SDCPAF
Trigger: AAATGCAGGGCAGTCGGACAACCGCAGTTTGGCAGA...TTTCTTGACTTCAAACCTGTGGGGCCAGGGGATATAGATTGAAATGCTCCGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358602.9
CDS-3UTR CAA 90 bp ATACGGAGCATTTCAATCTATATCCCCTGGCCCCACAGGTTTGAAGTCAAGAAAAGAGTGGTGGCAACATaGGCAGGTGGTTTGTCAGGC +
Preference number: 5 (lower is better)
Translates to: IRSISIYIPWPHRFEVKKRVVAT*AGGLSG
Trigger: GCCTGACAAACCACCTGCCAATGTTGCCACCACTCT...TTTCTTGACTTCAAACCTGTGGGGCCAGGGGATATAGATTGAAATGCTCCGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358602.9
CDS-3UTR CAA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGTGGGTGCAGTGTTGTaGTTGCTTGCCGTGGTTGTG +
Preference number: 5 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEEVGAVL*LLAVVV
Trigger: CACAACCACGGCAAGCAACAACAACACTGCACCCAC...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTCTTGTGAGGGGCAGTaGTGCCATGAGGGGGTGGTC +
Preference number: 5 (lower is better)
Translates to: MGNGQSQMFTENRSVSKISCEGQ*CHEGVV
Trigger: GACCACCCCCTCATGGCACAACTGCCCCTCACAAGA...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGTACATCCTGGCTGTTaGCTGGCAAATGGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEEVHPGC*LANGCW
Trigger: CCAGCAGCCATTTGCCAGCAAACAGCCAGGATGTAC...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGTCGCCAGAGGCTGGATaGGCGCAAAACCCATCTGAG +
Preference number: 5 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKSPEAG*AQNPSE
Trigger: CTCAGATGGGTTTTGCGCCAATCCAGCCTCTGGCGA...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS TCA 90 bp CTGAGGTTGGGAAATGGATGCAGCAATACTGTGGGTAGGAGTGTTTaGCATTGCAGATGCTCTTCCACTGACTGCTTTATTCCTGATGGG +
Preference number: 5 (lower is better)
Translates to: LRLGNGCSNTVGRSV*HCRCSSTDCFIPDG
Trigger: CCCATCAGGAATAAAGCAGTCAGTGGAAGAGCATCTGCAATGTCAAACACTCCTACCCACAGTATTGCTGCATCCATTTCCCAACCTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330838.10
CDS TCA 90 bp AGTCTGTGCATCAATATCAATGGCAGGGTAGATAGGAAGCATGGCTaGAGGAGAGATGATAGGACTTGGAGTTGGAGTCTGAGGTTGGGA +
Preference number: 5 (lower is better)
Translates to: SLCININGRVDRKHG*RRDDRTWSWSLRLG
Trigger: TCCCAACCTCAGACTCCAACTCCAAGTCCTATCATCTCTCCTTCAGCCATGCTTCCTATCTACCCTGCCATTGATATTGATGCACAGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000514252.1
ENST00000558247.5
ENST00000561029.1
ENST00000639793.1
CDS TCA 90 bp GGCTGCTTTTTGCTGCTCACAGTGGTAGTGACCACAGCTGGTGAATaGTTGTCACTCTTACGACTGCTGTTGCTGTTACTACTTTCATCG +
Preference number: 5 (lower is better)
Translates to: GCFLLLTVVVTTAGE*LSLLRLLLLLLLSS
Trigger: CGATGAAAGTAGTAACAGCAACAGCAGTCGTAAGAGTGACAATCATTCACCAGCTGTGGTCACTACCACTGTGAGCAGCAAAAAGCAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000513908.1
ENST00000558247.5
CDS TCA 90 bp GTTTTGTTGAGCTCCTCGATCTTCTCCTTGGTAAGTTGGTCAGCATaGGCCAGTTCCAAGGACTGCAGCTGTGCATTCTTTTCTATGGCT +
Preference number: 5 (lower is better)
Translates to: VLLSSSIFSLVSWSA*ASSKDCSCAFFSMA
Trigger: AGCCATAGAAAAGAATGCACAGCTGCAGTCCTTGGAACTGGCTCATGCTGACCAACTTACCAAGGAGAAGATCGAGGAGCTCAACAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000514252.1
ENST00000558247.5
ENST00000561029.1
ENST00000639793.1
CDS GCA 90 bp GTAGACAAATTGCTCCCAATAACAGATGGAGCTGACGTTCCAGTTTaGCTGATACGTGCAGAACGTTCAGTCCCAATAGGGACTGGAACT +
Preference number: 5 (lower is better)
Translates to: VDKLLPITDGADVPV*LIRAERSVPIGTGT
Trigger: AGTTCCAGTCCCTATTGGGACTGAACGTTCTGCACGTATCAGGCAAACTGGAACGTCAGCTCCATCTGTTATTGGGAGCAATTTGTCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000510127.1
ENST00000558247.5
CDS-3UTR CAA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGCCGACTGCCCTGCATTaGCTGTGCTTTCAGCTCTCA +
Preference number: 5 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKPTALH*LCFQLS
Trigger: TGAGAGCTGAAAGCACAGCAAATGCAGGGCAGTCGG...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGTCTGCCAAACTGCGGTaGTCCGACTGCCCTGCATTT +
Preference number: 5 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKSAKLR*SDCPAF
Trigger: AAATGCAGGGCAGTCGGACAACCGCAGTTTGGCAGA...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGTCCTTCTTCCCTCTTTaGCCCACGCTTAGGACTTGC +
Preference number: 5 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEESFFPL*PTLRTC
Trigger: GCAAGTCCTAAGCGTGGGCAAAAGAGGGAAGAAGGA...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAATCTTGTGAGGGGCAGTaGTGCCATGAGGGGGTGGTC +
Preference number: 5 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKSCEGQ*CHEGVV
Trigger: GACCACCCCCTCATGGCACAACTGCCCCTCACAAGA...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAATCTTGTGAGGGGCAGTaGTGCCATGAGGGGGTGGTC +
Preference number: 5 (lower is better)
Translates to: QRTASTESYVQRGRGKEKSCEGQ*CHEGVV
Trigger: GACCACCCCCTCATGGCACAACTGCCCCTCACAAGA...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCACCCTGCCAACTGTGCTaGGCCCAGTACTGGCTGTCC +
Preference number: 5 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSPCQLC*AQYWLS
Trigger: GGACAGCCAGTACTGGGCCAAGCACAGTTGGCAGGG...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS GCA 90 bp ATGAGGGCCATTAAATATGGGTCCTCCAGCACCATCAGGGATAGGTaGTACTGGAGGAATCATTGCATTCCCATACACAGAAAAAGGCAT +
Preference number: 5 (lower is better)
Translates to: MRAIKYGSSSTIRDR*YWRNHCIPIHRKRH
Trigger: ATGCCTTTTTCTGTGTATGGGAATGCAATGATTCCTCCAGTAGCACCTATCCCTGATGGTGCTGGAGGACCCATATTTAATGGCCCTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCCAAGTCCGGTTACGCTaGGCCTTGTGGTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFQVRLR*ALWCCC
Trigger: GCAGCAGCACCACAAGGCCAAGCGTAACCGGACTTG...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330838.10
ENST00000358602.9
CDS-3UTR CAA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTCTGCCAAACTGCGGTaGTCCGACTGCCCTGCATTT +
Preference number: 5 (lower is better)
Translates to: MGNGQSQMFTENRSVSKISAKLR*SDCPAF
Trigger: AAATGCAGGGCAGTCGGACAACCGCAGTTTGGCAGA...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGCTGGTACTGCTGCTCTaGGACTCTCCATTCACCTTC +
Preference number: 5 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKLVLLL*DSPFTF
Trigger: GAAGGTGAATGGAGAGTCCAAGAGCAGCAGTACCAG...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGTCCTTCTTCCCTCTTTaGCCCACGCTTAGGACTTGC +
Preference number: 5 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKSFFPL*PTLRTC
Trigger: GCAAGTCCTAAGCGTGGGCAAAAGAGGGAAGAAGGA...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCGGGTCATGGGCAACCTaGGTGGACGGATCTGCTGGA +
Preference number: 5 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFGSWAT*VDGSAG
Trigger: TCCAGCAGATCCGTCCACCAAGGTTGCCCATGACCC...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp ATACGGAGCATTTCAATCTATATCCCCTGGCCCCACAGGTTTGAAGTCAAGAAATTTGTGGGTGCAGTGTaGTTGTTGCTTGCCGTGGTT +
Preference number: 5 (lower is better)
Translates to: IRSISIYIPWPHRFEVKKFVGAV*LLLAVV
Trigger: AACCACGGCAAGCAACAACAACACTGCACCCACAAA...TTTCTTGACTTCAAACCTGTGGGGCCAGGGGATATAGATTGAAATGCTCCGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358602.9
CDS-3UTR CAA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGTTTGTGGGTGCAGTGTaGTTGTTGCTTGCCGTGGTT +
Preference number: 5 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEEFVGAV*LLLAVV
Trigger: AACCACGGCAAGCAACAACAACACTGCACCCACAAA...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGTGTTGGCAAGACTGTaGCTGCTGTTGCTGAAGTTG +
Preference number: 5 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEEVLARL*LLLLKL
Trigger: CAACTTCAGCAACAGCAGCAACAGTCTTGCCAACAC...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAATCGCCAGAGGCTGGATaGGCGCAAAACCCATCTGAG +
Preference number: 5 (lower is better)
Translates to: QRTASTESYVQRGRGKEKSPEAG*AQNPSE
Trigger: CTCAGATGGGTTTTGCGCCAATCCAGCCTCTGGCGA...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAATCGCCAGAGGCTGGATaGGCGCAAAACCCATCTGAG +
Preference number: 5 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKSPEAG*AQNPSE
Trigger: CTCAGATGGGTTTTGCGCCAATCCAGCCTCTGGCGA...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS TCA 90 bp AAGCTGTTTCCAGCATTGGATTTTCCAAATCATCCTGATCCAAAATaGAAGACTCCACCTCAGAAACCTCCTCTTCCTCGTCGTCGTCGT +
Preference number: 5 (lower is better)
Translates to: KLFPALDFPNHPDPK*KTPPQKPPLPRRRR
Trigger: ACGACGACGACGAGGAAGAGGAGGTTTCTGAGGTGGAGTCTTTCATTTTGGATCAGGATGATTTGGAAAATCCAATGCTGGAAACAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000558247.5
ENST00000639793.1
CDS TCA 90 bp GTACCAGAAGGAGTTACAATTCCTGTACTATCTCGCTCCATTGCTTaGTGTTGTGAAAATACTCCTGGGTCAGACATCGGTCTGTGGATC +
Preference number: 5 (lower is better)
Translates to: VPEGVTIPVLSRSIA*CCENTPGSDIGLWI
Trigger: GATCCACAGACCGATGTCTGACCCAGGAGTATTTTCACAACATCAAGCAATGGAGCGAGATAGTACAGGAATTGTAACTCCTTCTGGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000510127.1
ENST00000558247.5
CDS GCA 90 bp TTTATGTCAGAGCCCATGTCTAACAGGAGCTTAACAGCAGCTGTATaGCCATTCATAGCTGCTAACATCAGAGGAGAGATGCCCAATTTG +
Preference number: 5 (lower is better)
Translates to: FMSEPMSNRSLTAAV*PFIAANIRGEMPNL
Trigger: CAAATTGGGCATCTCTCCTCTGATGTTAGCAGCTATGAATGGGCATACAGCTGCTGTTAAGCTCCTGTTAGACATGGGCTCTGACATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000514252.1
ENST00000558247.5
ENST00000561029.1
CDS GCA 90 bp GTTGTTGTGGTGGCATTGGATGTCTTCACAACTGTGACAAAAAGCTaGCTTCGGACAGAAGGTGAACTTGGACTGCCATTTGTAGATGTA +
Preference number: 5 (lower is better)
Translates to: VVVVALDVFTTVTKS*LRTEGELGLPFVDV
Trigger: TACATCTACAAATGGCAGTCCAAGTTCACCTTCTGTCCGAAGGCAGCTTTTTGTCACAGTTGTGAAGACATCCAATGCCACCACAACAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS GCA 90 bp CACAGAAAAAGGCATACCCCCAACTTTAGGAAAGTCCATGTAGCCTaGAGGAACATGCTGATGGAATGTACCAGAAGGAGTTACAATTCC +
Preference number: 5 (lower is better)
Translates to: HRKRHTPNFRKVHVA*RNMLMECTRRSYNS
Trigger: GGAATTGTAACTCCTTCTGGTACATTCCATCAGCATGTTCCTGCAGGCTACATGGACTTTCCTAAAGTTGGGGGTATGCCTTTTTCTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS GCA 90 bp CTCTGGAGACTGATTGGTGATGTAACCCTGTACATCCTGGCTGTTTaGTGGCAAATGGCTGCTGGACTTTTGTTTAGAAGCAGCTTTATT +
Preference number: 5 (lower is better)
Translates to: LWRLIGDVTLYILAV*WQMAAGLLFRSSFI
Trigger: AATAAAGCTGCTTCTAAACAAAAGTCCAGCAGCCATTTGCCAGCAAACAGCCAGGATGTACAGGGTTACATCACCAATCAGTCTCCAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000514252.1
ENST00000558247.5
ENST00000561029.1
ENST00000639793.1
CDS GCA 90 bp AGCCGCTGTCTCCACCATGTTTTATCAAACTGCCATGTTTCTTACTaGACTATGATTAGATCATTGCCAGCAGGAACACTCCTCTGTGTC +
Preference number: 5 (lower is better)
Translates to: SRCLHHVLSNCHVSY*TMIRSLPAGTLLCV
Trigger: GACACAGAGGAGTGTTCCTGCTGGCAATGATCTAATCATAGTGCAGTAAGAAACATGGCAGTTTGATAAAACATGGTGGAGACAGCGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509867.6
CDS-3UTR CAA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAACCGACTGCCCTGCATTaGCTGTGCTTTCAGCTCTCA +
Preference number: 5 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKPTALH*LCFQLS
Trigger: TGAGAGCTGAAAGCACAGCAAATGCAGGGCAGTCGG...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGATCTGTTTTATGCTCTaGATCCGCGCCTGCTTCCAA +
Preference number: 5 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEEICFML*IRACFQ
Trigger: TTGGAAGCAGGCGCGGATCAAGAGCATAAAACAGAT...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAGAGTGGTGGCAACATaGGCAGGTGGTTTGTCAGGC +
Preference number: 5 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKRVVAT*AGGLSG
Trigger: GCCTGACAAACCACCTGCCAATGTTGCCACCACTCT...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGAGTTGGAGTCTGAGGTaGGGAAATGGATGCAGCAAT +
Preference number: 5 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEESWSLR*GNGCSN
Trigger: ATTGCTGCATCCATTTCCCAACCTCAGACTCCAACT...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGTGCTGGCGTTTTTGTTaGCTTCAGCAGCCTGTCTAT +
Preference number: 5 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEECWRFC*LQQPVY
Trigger: ATAGACAGGCTGCTGAAGCAAACAAAAACGCCAGCA...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGAGAACCTGCCAAAGTaGTCCAGGTTGCAGATATAC +
Preference number: 5 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEEENLPK*SRLQIY
Trigger: GTATATCTGCAACCTGGACAACTTTGGCAGGTTCTC...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCCTGGTACTGCTGCTCTaGGACTCTCCATTCACCTTC +
Preference number: 5 (lower is better)
Translates to: MGNGQSQMFTENRSVSKILVLLL*DSPFTF
Trigger: GAAGGTGAATGGAGAGTCCAAGAGCAGCAGTACCAG...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGATTGAGTTGCTTGTCTaGTTGATTCAGTGCCACCCC +
Preference number: 5 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEEIELLV*LIQCHP
Trigger: GGGGTGGCACTGAATCAACAAGACAAGCAACTCAAT...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAGTGGGTGCAGTGTTGTaGTTGCTTGCCGTGGTTGTG +
Preference number: 5 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKVGAVL*LLAVVV
Trigger: CACAACCACGGCAAGCAACAACAACACTGCACCCAC...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGAACAGATCCCGGAGGTaGTTGCTGATTAGAATGAGC +
Preference number: 5 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEENRSRR*LLIRMS
Trigger: GCTCATTCTAATCAGCAACAACCTCCGGGATCTGTT...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGGCTGAAGAGGTGGTCTaGGTTCCTGAGAAACAGATC +
Preference number: 5 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKAEEVV*VPEKQI
Trigger: GATCTGTTTCTCAGGAACCAAGACCACCTCTTCAGC...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGCCACTGGAGCAGAACTaGTTGCTAAAGGAGGAACAG +
Preference number: 5 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKPLEQN*LLKEEQ
Trigger: CTGTTCCTCCTTTAGCAACAAGTTCTGCTCCAGTGG...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp ATACGGAGCATTTCAATCTATATCCCCTGGCCCCACAGGTTTGAAGTCAAGAAACCAGTCTACTTTGTCTaGATTGCCACCAATCCCTTC +
Preference number: 5 (lower is better)
Translates to: IRSISIYIPWPHRFEVKKPVYFV*IATNPF
Trigger: GAAGGGATTGGTGGCAATCAAGACAAAGTAGACTGG...TTTCTTGACTTCAAACCTGTGGGGCCAGGGGATATAGATTGAAATGCTCCGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358602.9
CDS-3UTR CAA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGTCCAGTCCACACCGTTaGAGGGCCATTATTTTCCGT +
Preference number: 5 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKSSPHR*RAIIFR
Trigger: ACGGAAAATAATGGCCCTCAAACGGTGTGGACTGGA...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAAGTACATCCTGGCTGTTaGCTGGCAAATGGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: QRTASTESYVQRGRGKEKVHPGC*LANGCW
Trigger: CCAGCAGCCATTTGCCAGCAAACAGCCAGGATGTAC...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGTGTTCCTCCCTTGTTTaGTTGAGCTCCTCGATCTTC +
Preference number: 5 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEECSSLV*LSSSIF
Trigger: GAAGATCGAGGAGCTCAACAAAACAAGGGAGGAACA...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS TCA 90 bp AGCAACTTGGAAGCTGTTTCCAGCATTGGATTTTCCAAATCATCCTaGTCCAAAATGAAAGACTCCACCTCAGAAACCTCCTCTTCCTCG +
Preference number: 5 (lower is better)
Translates to: SNLEAVSSIGFSKSS*SKMKDSTSETSSSS
Trigger: CGAGGAAGAGGAGGTTTCTGAGGTGGAGTCTTTCATTTTGGATCAGGATGATTTGGAAAATCCAATGCTGGAAACAGCTTCCAAGTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000558247.5
ENST00000639793.1
CDS CCA 90 bp TGTCCAGGTTGCAGATATACCTATGGTAGTAGTGGTTGTGGCACTTaGAGGTTCTGTCAAGACTTCAGGCTCATCTTCAACTTTAAGCTT +
Preference number: 5 (lower is better)
Translates to: CPGCRYTYGSSGCGT*RFCQDFRLIFNFKL
Trigger: AAGCTTAAAGTTGAAGATGAGCCTGAAGTCTTGACAGAACCTCCAAGTGCCACAACCACTACTACCATAGGTATATCTGCAACCTGGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000513908.1
ENST00000558247.5
CDS-3UTR CAA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGCCTGATAAGAGCAACTaGGAAGCTGTTTCCAGCATT +
Preference number: 5 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEEPDKSN*EAVSSI
Trigger: AATGCTGGAAACAGCTTCCAAGTTGCTCTTATCAGG...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCACCGACTGCCCTGCATTaGCTGTGCTTTCAGCTCTCA +
Preference number: 5 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSPTALH*LCFQLS
Trigger: TGAGAGCTGAAAGCACAGCAAATGCAGGGCAGTCGG...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCATCTGCCAAACTGCGGTaGTCCGACTGCCCTGCATTT +
Preference number: 5 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSSAKLR*SDCPAF
Trigger: AAATGCAGGGCAGTCGGACAACCGCAGTTTGGCAGA...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGCCACATTTGCATGCATaGCCAACAAAACCTGTGCAA +
Preference number: 5 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEEPHLHA*PTKPVQ
Trigger: TTGCACAGGTTTTGTTGGCAATGCATGCAAATGTGG...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCGTGCTGTATCCCCTGTaGCTGTTGTTGCATGAACGT +
Preference number: 5 (lower is better)
Translates to: MGNGQSQMFTENRSVSKIVLYPL*LLLHER
Trigger: ACGTTCATGCAACAACAGCAACAGGGGATACAGCAC...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCAGAGTGGTGGCAACATaGGCAGGTGGTTTGTCAGGC +
Preference number: 5 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFRVVAT*AGGLSG
Trigger: GCCTGACAAACCACCTGCCAATGTTGCCACCACTCT...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGTTGGAGTCTGAGGTaGGGAAATGGATGCAGCAAT +
Preference number: 5 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKSWSLR*GNGCSN
Trigger: ATTGCTGCATCCATTTCCCAACCTCAGACTCCAACT...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAGAGATGCCCAATTaGCTACCAGTTCTAGAGTTA +
Preference number: 5 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEEGEMPN*LPVLEL
Trigger: TAACTCTAGAACTGGTAGCAAATTGGGCATCTCTCC...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGTGCTGGCGTTTTTGTTaGCTTCAGCAGCCTGTCTAT +
Preference number: 5 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKCWRFC*LQQPVY
Trigger: ATAGACAGGCTGCTGAAGCAAACAAAAACGCCAGCA...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGAAAATGCTGGCGTTTTaGTTTGCTTCAGCAGCCTGT +
Preference number: 5 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEEKMLAF*FASAAC
Trigger: ACAGGCTGCTGAAGCAAACAAAAACGCCAGCATTTT...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp ATACGGAGCATTTCAATCTATATCCCCTGGCCCCACAGGTTTGAAGTCAAGAAAAAAATGCTGGCGTTTTaGTTTGCTTCAGCAGCCTGT +
Preference number: 5 (lower is better)
Translates to: IRSISIYIPWPHRFEVKKKMLAF*FASAAC
Trigger: ACAGGCTGCTGAAGCAAACAAAAACGCCAGCATTTT...TTTCTTGACTTCAAACCTGTGGGGCCAGGGGATATAGATTGAAATGCTCCGTAT
44% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000358602.9
CDS-3UTR CAA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGGAGAACCTGCCAAAGTaGTCCAGGTTGCAGATATAC +
Preference number: 5 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKENLPK*SRLQIY
Trigger: GTATATCTGCAACCTGGACAACTTTGGCAGGTTCTC...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAACTGGTACTGCTGCTCTaGGACTCTCCATTCACCTTC +
Preference number: 5 (lower is better)
Translates to: QRTASTESYVQRGRGKEKLVLLL*DSPFTF
Trigger: GAAGGTGAATGGAGAGTCCAAGAGCAGCAGTACCAG...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAACTGGTACTGCTGCTCTaGGACTCTCCATTCACCTTC +
Preference number: 5 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKLVLLL*DSPFTF
Trigger: GAAGGTGAATGGAGAGTCCAAGAGCAGCAGTACCAG...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGCTCTTACGACTGCTGTaGCTGTTACTACTTTCATCG +
Preference number: 5 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEELLRLL*LLLLSS
Trigger: CGATGAAAGTAGTAACAGCAACAGCAGTCGTAAGAG...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGCTGTTAACTTCCCATTaGGAGAAGAAAGGGGAGATG +
Preference number: 5 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEELLTSH*EKKGEM
Trigger: CATCTCCCCTTTCTTCTCCAAATGGGAAGTTAACAG...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAATCCTTCTTCCCTCTTTaGCCCACGCTTAGGACTTGC +
Preference number: 5 (lower is better)
Translates to: QRTASTESYVQRGRGKEKSFFPL*PTLRTC
Trigger: GCAAGTCCTAAGCGTGGGCAAAAGAGGGAAGAAGGA...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGATTGAGTTGCTTGTCTaGTTGATTCAGTGCCACCCC +
Preference number: 5 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKIELLV*LIQCHP
Trigger: GGGGTGGCACTGAATCAACAAGACAAGCAACTCAAT...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGCTGATGACCCTATTTaGGAATTTGCTGAGGAGCTT +
Preference number: 5 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEEADDPI*EFAEEL
Trigger: AAGCTCCTCAGCAAATTCCAAAATAGGGTCATCAGC...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGTGGCAGTTTGAGATGTaGATGACAGAGCTACAGTTG +
Preference number: 5 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEEWQFEM*MTELQL
Trigger: CAACTGTAGCTCTGTCATCAACATCTCAAACTGCCA...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCGTGGGTGCAGTGTTGTaGTTGCTTGCCGTGGTTGTG +
Preference number: 5 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFVGAVL*LLAVVV
Trigger: CACAACCACGGCAAGCAACAACAACACTGCACCCAC...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTTGTGGGTGCAGTGTaGTTGTTGCTTGCCGTGGTT +
Preference number: 5 (lower is better)
Translates to: MGNGQSQMFTENRSVSKIFVGAV*LLLAVV
Trigger: AACCACGGCAAGCAACAACAACACTGCACCCACAAA...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAACAGATCCCGGAGGTaGTTGCTGATTAGAATGAGC +
Preference number: 5 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKNRSRR*LLIRMS
Trigger: GCTCATTCTAATCAGCAACAACCTCCGGGATCTGTT...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCGCTGAAGAGGTGGTCTaGGTTCCTGAGAAACAGATC +
Preference number: 5 (lower is better)
Translates to: MGNGQSQMFTENRSVSKIAEEVV*VPEKQI
Trigger: GATCTGTTTCTCAGGAACCAAGACCACCTCTTCAGC...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCCCACTGGAGCAGAACTaGTTGCTAAAGGAGGAACAG +
Preference number: 5 (lower is better)
Translates to: MGNGQSQMFTENRSVSKIPLEQN*LLKEEQ
Trigger: CTGTTCCTCCTTTAGCAACAAGTTCTGCTCCAGTGG...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCCAATACCTGAGGGACTaGGAGCAGGTCTCTGTAATG +
Preference number: 5 (lower is better)
Translates to: MGNGQSQMFTENRSVSKIQYLRD*EQVSVM
Trigger: CATTACAGAGACCTGCTCCAAGTCCCTCAGGTATTG...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGTATGGCGAGTCCATATaGACAATACCTGAGGGACTT +
Preference number: 5 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEEYGESI*TIPEGL
Trigger: AAGTCCCTCAGGTATTGTCAATATGGACTCGCCATA...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp ATACGGAGCATTTCAATCTATATCCCCTGGCCCCACAGGTTTGAAGTCAAGAAATATGGCGAGTCCATATaGACAATACCTGAGGGACTT +
Preference number: 5 (lower is better)
Translates to: IRSISIYIPWPHRFEVKKYGESI*TIPEGL
Trigger: AAGTCCCTCAGGTATTGTCAATATGGACTCGCCATA...TTTCTTGACTTCAAACCTGTGGGGCCAGGGGATATAGATTGAAATGCTCCGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358602.9
CDS-3UTR CAA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGCCAGTCTACTTTGTCTaGATTGCCACCAATCCCTTC +
Preference number: 5 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKPVYFV*IATNPF
Trigger: GAAGGGATTGGTGGCAATCAAGACAAAGTAGACTGG...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTCCAGTCCACACCGTTaGAGGGCCATTATTTTCCGT +
Preference number: 5 (lower is better)
Translates to: MGNGQSQMFTENRSVSKISSPHR*RAIIFR
Trigger: ACGGAAAATAATGGCCCTCAAACGGTGTGGACTGGA...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCGTACATCCTGGCTGTTaGCTGGCAAATGGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFVHPGC*LANGCW
Trigger: CCAGCAGCCATTTGCCAGCAAACAGCCAGGATGTAC...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGCCTGGCCCCACAGGTTaGAAGTCAAGAAAATATAGG +
Preference number: 5 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKPGPTG*KSRKYR
Trigger: CCTATATTTTCTTGACTTCAAACCTGTGGGGCCAGG...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000358602.9
CDS TCA 90 bp AGGAGTTACAATTCCTGTACTATCTCGCTCCATTGCTTGATGTTGTaGAAATACTCCTGGGTCAGACATCGGTCTGTGGATCATAGGATT +
Preference number: 5 (lower is better)
Translates to: RSYNSCTISLHCLML*KYSWVRHRSVDHRI
Trigger: AATCCTATGATCCACAGACCGATGTCTGACCCAGGAGTATTTTCACAACATCAAGCAATGGAGCGAGATAGTACAGGAATTGTAACTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000510127.1
ENST00000558247.5
CDS GCA 90 bp GGTATTATTTCTTTTACCATGAGAACCTGCCAAAGTTGTCCAGGTTaGAGATATACCTATGGTAGTAGTGGTTGTGGCACTTGGAGGTTC +
Preference number: 5 (lower is better)
Translates to: GIISFTMRTCQSCPG*RYTYGSSGCGTWRF
Trigger: GAACCTCCAAGTGCCACAACCACTACTACCATAGGTATATCTGCAACCTGGACAACTTTGGCAGGTTCTCATGGTAAAAGAAATAATACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000513908.1
ENST00000558247.5
CDS-3UTR CAA 90 bp ATACGGAGCATTTCAATCTATATCCCCTGGCCCCACAGGTTTGAAGTCAAGAAATATGTAAGTGCTGTATaGCCTGTTGAAGACTGTGCA +
Preference number: 5 (lower is better)
Translates to: IRSISIYIPWPHRFEVKKYVSAV*PVEDCA
Trigger: TGCACAGTCTTCAACAGGCAATACAGCACTTACATA...TTTCTTGACTTCAAACCTGTGGGGCCAGGGGATATAGATTGAAATGCTCCGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358602.9
CDS-3UTR CAA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGTATGTAAGTGCTGTATaGCCTGTTGAAGACTGTGCA +
Preference number: 5 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEEYVSAV*PVEDCA
Trigger: TGCACAGTCTTCAACAGGCAATACAGCACTTACATA...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAGTGCTGTATCCCCTGTaGCTGTTGTTGCATGAACGT +
Preference number: 5 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKVLYPL*LLLHER
Trigger: ACGTTCATGCAACAACAGCAACAGGGGATACAGCAC...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAAGTGCTGTATCCCCTGTaGCTGTTGTTGCATGAACGT +
Preference number: 5 (lower is better)
Translates to: QRTASTESYVQRGRGKEKVLYPL*LLLHER
Trigger: ACGTTCATGCAACAACAGCAACAGGGGATACAGCAC...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp ATACGGAGCATTTCAATCTATATCCCCTGGCCCCACAGGTTTGAAGTCAAGAAAAAACATGACCAGCTCTaGCAGCTTTCATTAAAGGAG +
Preference number: 5 (lower is better)
Translates to: IRSISIYIPWPHRFEVKKKHDQL*QLSLKE
Trigger: CTCCTTTAATGAAAGCTGCAAGAGCTGGTCATGTTT...TTTCTTGACTTCAAACCTGTGGGGCCAGGGGATATAGATTGAAATGCTCCGTAT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000358602.9
CDS-3UTR CAA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCAGTTGGAGTCTGAGGTaGGGAAATGGATGCAGCAAT +
Preference number: 5 (lower is better)
Translates to: MGNGQSQMFTENRSVSKISWSLR*GNGCSN
Trigger: ATTGCTGCATCCATTTCCCAACCTCAGACTCCAACT...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGCTCTTACGACTGCTGTaGCTGTTACTACTTTCATCG +
Preference number: 5 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKLLRLL*LLLLSS
Trigger: CGATGAAAGTAGTAACAGCAACAGCAGTCGTAAGAG...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCATCCTTCTTCCCTCTTTaGCCCACGCTTAGGACTTGC +
Preference number: 5 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSSFFPL*PTLRTC
Trigger: GCAAGTCCTAAGCGTGGGCAAAAGAGGGAAGAAGGA...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGAACTCCCGAATAGCATaGATATTACAGCCTCCTCTT +
Preference number: 5 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEENSRIA*ILQPPL
Trigger: AAGAGGAGGCTGTAATATCAATGCTATTCGGGAGTT...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp ATACGGAGCATTTCAATCTATATCCCCTGGCCCCACAGGTTTGAAGTCAAGAAAAACTCCCGAATAGCATaGATATTACAGCCTCCTCTT +
Preference number: 5 (lower is better)
Translates to: IRSISIYIPWPHRFEVKKNSRIA*ILQPPL
Trigger: AAGAGGAGGCTGTAATATCAATGCTATTCGGGAGTT...TTTCTTGACTTCAAACCTGTGGGGCCAGGGGATATAGATTGAAATGCTCCGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000358602.9
CDS-3UTR CAA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGTGGCAGTTTGAGATGTaGATGACAGAGCTACAGTTG +
Preference number: 5 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKWQFEM*MTELQL
Trigger: CAACTGTAGCTCTGTCATCAACATCTCAAACTGCCA...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCGTTGTTGTGGTGGCATaGGATGTCTTCACAACTGTG +
Preference number: 5 (lower is better)
Translates to: MGNGQSQMFTENRSVSKIVVVVA*DVFTTV
Trigger: CACAGTTGTGAAGACATCCAATGCCACCACAACAAC...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAATTTGTGGGTGCAGTGTaGTTGTTGCTTGCCGTGGTT +
Preference number: 5 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKFVGAV*LLLAVV
Trigger: AACCACGGCAAGCAACAACAACACTGCACCCACAAA...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCAACAGATCCCGGAGGTaGTTGCTGATTAGAATGAGC +
Preference number: 5 (lower is better)
Translates to: MGNGQSQMFTENRSVSKINRSRR*LLIRMS
Trigger: GCTCATTCTAATCAGCAACAACCTCCGGGATCTGTT...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCCTGGAGCAGAACTTGTaGCTAAAGGAGGAACAGTCA +
Preference number: 5 (lower is better)
Translates to: MGNGQSQMFTENRSVSKILEQNL*LKEEQS
Trigger: TGACTGTTCCTCCTTTAGCAACAAGTTCTGCTCCAG...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAACCACTGGAGCAGAACTaGTTGCTAAAGGAGGAACAG +
Preference number: 5 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKPLEQN*LLKEEQ
Trigger: CTGTTCCTCCTTTAGCAACAAGTTCTGCTCCAGTGG...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAAGGGGGCACTGAAATaGGGAGCAATAGGCTTATTT +
Preference number: 5 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKKGALK*GAIGLF
Trigger: AAATAAGCCTATTGCTCCCAATTTCAGTGCCCCCTT...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAACAATACCTGAGGGACTaGGAGCAGGTCTCTGTAATG +
Preference number: 5 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKQYLRD*EQVSVM
Trigger: CATTACAGAGACCTGCTCCAAGTCCCTCAGGTATTG...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAACAATACCTGAGGGACTaGGAGCAGGTCTCTGTAATG +
Preference number: 5 (lower is better)
Translates to: QRTASTESYVQRGRGKEKQYLRD*EQVSVM
Trigger: CATTACAGAGACCTGCTCCAAGTCCCTCAGGTATTG...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGGTGCAGAAGAATCATTaGATGCTGATGAACACGGAG +
Preference number: 5 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKVQKNH*MLMNTE
Trigger: CTCCGTGTTCATCAGCATCAAATGATTCTTCTGCAC...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGCTAAATTTCCGTGTTaGCTCAGAAGCAGTTTACAG +
Preference number: 5 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEEAKFPC*LRSSLQ
Trigger: CTGTAAACTGCTTCTGAGCAAACACGGAAATTTAGC...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAACTTCTCCTTGGTAAGTaGGTCAGCATGAGCCAGTTC +
Preference number: 5 (lower is better)
Translates to: QRTASTESYVQRGRGKEKLLLGK*VSMSQF
Trigger: GAACTGGCTCATGCTGACCAACTTACCAAGGAGAAG...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAATCCTCCCTTGTTTTGTaGAGCTCCTCGATCTTCTCC +
Preference number: 5 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKSSLVL*SSSIFS
Trigger: GGAGAAGATCGAGGAGCTCAACAAAACAAGGGAGGA...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS TCA 90 bp CTGAAATTGGGAGCAATAGGCTTATTTGCTGGATGTACTGAATTCTaGCAAGCACTTTGTGTACTTAAGGTCGAAGGTAGCTGGACAGAA +
Preference number: 5 (lower is better)
Translates to: LKLGAIGLFAGCTEF*QALCVLKVEGSWTE
Trigger: TTCTGTCCAGCTACCTTCGACCTTAAGTACACAAAGTGCTTGTCAGAATTCAGTACATCCAGCAAATAAGCCTATTGCTCCCAATTTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCCCTGATAAGAGCAACTaGGAAGCTGTTTCCAGCATT +
Preference number: 5 (lower is better)
Translates to: MGNGQSQMFTENRSVSKIPDKSN*EAVSSI
Trigger: AATGCTGGAAACAGCTTCCAAGTTGCTCTTATCAGG...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCCCACATTTGCATGCATaGCCAACAAAACCTGTGCAA +
Preference number: 5 (lower is better)
Translates to: MGNGQSQMFTENRSVSKIPHLHA*PTKPVQ
Trigger: TTGCACAGGTTTTGTTGGCAATGCATGCAAATGTGG...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGAGCAACTTCACAATTTaGACATGTCCTCCATTAGCA +
Preference number: 5 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEESNFTI*TCPPLA
Trigger: TGCTAATGGAGGACATGTCAAAATTGTGAAGTTGCT...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAAATCTGTTTTATGCTCTaGATCCGCGCCTGCTTCCAA +
Preference number: 5 (lower is better)
Translates to: QRTASTESYVQRGRGKEKICFML*IRACFQ
Trigger: TTGGAAGCAGGCGCGGATCAAGAGCATAAAACAGAT...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCAGTGCTGTATCCCCTGTaGCTGTTGTTGCATGAACGT +
Preference number: 5 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSVLYPL*LLLHER
Trigger: ACGTTCATGCAACAACAGCAACAGGGGATACAGCAC...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAAACATGACCAGCTCTaGCAGCTTTCATTAAAGGAG +
Preference number: 5 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKKHDQL*QLSLKE
Trigger: CTCCTTTAATGAAAGCTGCAAGAGCTGGTCATGTTT...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTCCTGTGCTCTTTATTaGCCCCTCGAGCTAACAATA +
Preference number: 5 (lower is better)
Translates to: MGNGQSQMFTENRSVSKISCALY*PLELTI
Trigger: TATTGTTAGCTCGAGGGGCAAATAAAGAGCACAGGA...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCGGAGAGATGCCCAATTaGCTACCAGTTCTAGAGTTA +
Preference number: 5 (lower is better)
Translates to: MGNGQSQMFTENRSVSKIGEMPN*LPVLEL
Trigger: TAACTCTAGAACTGGTAGCAAATTGGGCATCTCTCC...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp ATACGGAGCATTTCAATCTATATCCCCTGGCCCCACAGGTTTGAAGTCAAGAAACTTTGGCTTGTACTATaGACTCCATACAAAGATGAC +
Preference number: 5 (lower is better)
Translates to: IRSISIYIPWPHRFEVKKLWLVL*TPYKDD
Trigger: GTCATCTTTGTATGGAGTCAATAGTACAAGCCAAAG...TTTCTTGACTTCAAACCTGTGGGGCCAGGGGATATAGATTGAAATGCTCCGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358602.9
CDS-3UTR CAA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAAGCAGCCTGTCTATCTTaGGCTTGTACTATTGACTCC +
Preference number: 5 (lower is better)
Translates to: QRTASTESYVQRGRGKEKAACLS*ACTIDS
Trigger: GGAGTCAATAGTACAAGCCAAAGATAGACAGGCTGC...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAATGCTGGCGTTTTTGTTaGCTTCAGCAGCCTGTCTAT +
Preference number: 5 (lower is better)
Translates to: QRTASTESYVQRGRGKEKCWRFC*LQQPVY
Trigger: ATAGACAGGCTGCTGAAGCAAACAAAAACGCCAGCA...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCAAAATGCTGGCGTTTTaGTTTGCTTCAGCAGCCTGT +
Preference number: 5 (lower is better)
Translates to: MGNGQSQMFTENRSVSKIKMLAF*FASAAC
Trigger: ACAGGCTGCTGAAGCAAACAAAAACGCCAGCATTTT...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCCTCTTACGACTGCTGTaGCTGTTACTACTTTCATCG +
Preference number: 5 (lower is better)
Translates to: MGNGQSQMFTENRSVSKILLRLL*LLLLSS
Trigger: CGATGAAAGTAGTAACAGCAACAGCAGTCGTAAGAG...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGCTCTGGATATCACAGTaGATGGAACAGATACTTTCT +
Preference number: 5 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEELWISQ*MEQILS
Trigger: AGAAAGTATCTGTTCCATCAACTGTGATATCCAGAG...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAAATTGAGTTGCTTGTCTaGTTGATTCAGTGCCACCCC +
Preference number: 5 (lower is better)
Translates to: QRTASTESYVQRGRGKEKIELLV*LIQCHP
Trigger: GGGGTGGCACTGAATCAACAAGACAAGCAACTCAAT...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGACCCTATTTTGGAATTaGCTGAGGAGCTTTTCAAAC +
Preference number: 5 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEETLFWN*LRSFSN
Trigger: GTTTGAAAAGCTCCTCAGCAAATTCCAAAATAGGGT...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCGCTGATGACCCTATTTaGGAATTTGCTGAGGAGCTT +
Preference number: 5 (lower is better)
Translates to: MGNGQSQMFTENRSVSKIADDPI*EFAEEL
Trigger: AAGCTCCTCAGCAAATTCCAAAATAGGGTCATCAGC...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTGGCAGTTTGAGATGTaGATGACAGAGCTACAGTTG +
Preference number: 5 (lower is better)
Translates to: MGNGQSQMFTENRSVSKIWQFEM*MTELQL
Trigger: CAACTGTAGCTCTGTCATCAACATCTCAAACTGCCA...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAAGTTGTTGTGGTGGCATaGGATGTCTTCACAACTGTG +
Preference number: 5 (lower is better)
Translates to: QRTASTESYVQRGRGKEKVVVVA*DVFTTV
Trigger: CACAGTTGTGAAGACATCCAATGCCACCACAACAAC...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAACAGATCCCGGAGGTaGTTGCTGATTAGAATGAGC +
Preference number: 5 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKNRSRR*LLIRMS
Trigger: GCTCATTCTAATCAGCAACAACCTCCGGGATCTGTT...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCGCTGAAGAGGTGGTCTaGGTTCCTGAGAAACAGATC +
Preference number: 5 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFAEEVV*VPEKQI
Trigger: GATCTGTTTCTCAGGAACCAAGACCACCTCTTCAGC...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCAGCTGAAGAGGTGGTCTaGGTTCCTGAGAAACAGATC +
Preference number: 5 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSAEEVV*VPEKQI
Trigger: GATCTGTTTCTCAGGAACCAAGACCACCTCTTCAGC...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAACTGGAGCAGAACTTGTaGCTAAAGGAGGAACAGTCA +
Preference number: 5 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKLEQNL*LKEEQS
Trigger: TGACTGTTCCTCCTTTAGCAACAAGTTCTGCTCCAG...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCACCACTGGAGCAGAACTaGTTGCTAAAGGAGGAACAG +
Preference number: 5 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSPLEQN*LLKEEQ
Trigger: CTGTTCCTCCTTTAGCAACAAGTTCTGCTCCAGTGG...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCAAGGGGGCACTGAAATaGGGAGCAATAGGCTTATTT +
Preference number: 5 (lower is better)
Translates to: MGNGQSQMFTENRSVSKIKGALK*GAIGLF
Trigger: AAATAAGCCTATTGCTCCCAATTTCAGTGCCCCCTT...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCCAATACCTGAGGGACTaGGAGCAGGTCTCTGTAATG +
Preference number: 5 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFQYLRD*EQVSVM
Trigger: CATTACAGAGACCTGCTCCAAGTCCCTCAGGTATTG...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGAGTTTCCCAAATGTGTaGAAGAAGGTGTTACAGAAC +
Preference number: 5 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEESFPNV*KKVLQN
Trigger: GTTCTGTAACACCTTCTTCAACACATTTGGGAAACT...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGACCTCCTGAAATGTTaGAAGCAAAGTTTCCCAAAT +
Preference number: 5 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEEDLLKC*KQSFPN
Trigger: ATTTGGGAAACTTTGCTTCAAACATTTCAGGAGGTC...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAAGCGGGGAAAAATGTaGTCTGTTAAAGTTAGCAGC +
Preference number: 5 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKKRGKM*SVKVSS
Trigger: GCTGCTAACTTTAACAGACAACATTTTTCCCCGCTT...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCGTGCAGAAGAATCATTaGATGCTGATGAACACGGAG +
Preference number: 5 (lower is better)
Translates to: MGNGQSQMFTENRSVSKIVQKNH*MLMNTE
Trigger: CTCCGTGTTCATCAGCATCAAATGATTCTTCTGCAC...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGCTACTGGAGGAATCATaGCATTCCCATACACAGAAA +
Preference number: 5 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKLLEES*HSHTQK
Trigger: TTTCTGTGTATGGGAATGCAATGATTCCTCCAGTAG...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCTCCAGTCCACACCGTTaGAGGGCCATTATTTTCCGT +
Preference number: 5 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFSSPHR*RAIIFR
Trigger: ACGGAAAATAATGGCCCTCAAACGGTGTGGACTGGA...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGGCTAAATTTCCGTGTTaGCTCAGAAGCAGTTTACAG +
Preference number: 5 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKAKFPC*LRSSLQ
Trigger: CTGTAAACTGCTTCTGAGCAAACACGGAAATTTAGC...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCACTTCTCCTTGGTAAGTaGGTCAGCATGAGCCAGTTC +
Preference number: 5 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSLLLGK*VSMSQF
Trigger: GAACTGGCTCATGCTGACCAACTTACCAAGGAGAAG...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCTCCTCCCTTGTTTTGTaGAGCTCCTCGATCTTCTCC +
Preference number: 5 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFSSLVL*SSSIFS
Trigger: GGAGAAGATCGAGGAGCTCAACAAAACAAGGGAGGA...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAATGTTCCTCCCTTGTTTaGTTGAGCTCCTCGATCTTC +
Preference number: 5 (lower is better)
Translates to: QRTASTESYVQRGRGKEKCSSLV*LSSSIF
Trigger: GAAGATCGAGGAGCTCAACAAAACAAGGGAGGAACA...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp AACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGCTGCTGTTGCTGAAGTaGAATTCTTTGAGCTTTAAC +
Preference number: 5 (lower is better)
Translates to: NQPAKEQLQQKVMSKGEELLLLK*NSLSFN
Trigger: GTTAAAGCTCAAAGAATTCAACTTCAGCAACAGCAG...CTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCAGTGTTGGCAAGACTGTaGCTGCTGTTGCTGAAGTTG +
Preference number: 5 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSVLARL*LLLLKL
Trigger: CAACTTCAGCAACAGCAGCAACAGTCTTGCCAACAC...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS TCA 90 bp AGTGCTGTATTGCCTGTTGAAGACTGTGCATTAACATCTGCTTTATaGGCTAGCAGCAACTTCACAATTTTGACATGTCCTCCATTAGCA +
Preference number: 5 (lower is better)
Translates to: SAVLPVEDCALTSAL*ASSNFTILTCPPLA
Trigger: TGCTAATGGAGGACATGTCAAAATTGTGAAGTTGCTGCTAGCTCATAAAGCAGATGTTAATGCACAGTCTTCAACAGGCAATACAGCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
ENST00000639793.1
CDS GCA 90 bp TATCCGGTCTCCAGTCTTGTCTTTCTGTTTATCAATATCTATGTGTaGACCAGTAAACTCCCGAATAGCATTGATATTACAGCCTCCTCT +
Preference number: 5 (lower is better)
Translates to: YPVSSLVFLFINIYV*TSKLPNSIDITASS
Trigger: AGAGGAGGCTGTAATATCAATGCTATTCGGGAGTTTACTGGTGCACACATAGATATTGATAAACAGAAAGACAAGACTGGAGACCGGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS CCA 90 bp ACAAAATGCTGGCGTTTTTGTTTGCTTCAGCAGCCTGTCTATCTTTaGCTTGTACTATTGACTCCATACAAAGATGACACTTCTTCAGCA +
Preference number: 5 (lower is better)
Translates to: TKCWRFCLLQQPVYL*LVLLTPYKDDTSSA
Trigger: TGCTGAAGAAGTGTCATCTTTGTATGGAGTCAATAGTACAAGCCAAAGATAGACAGGCTGCTGAAGCAAACAAAAACGCCAGCATTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000514252.1
ENST00000558247.5
ENST00000561029.1
CDS-3UTR CAA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAACCTGATAAGAGCAACTaGGAAGCTGTTTCCAGCATT +
Preference number: 5 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKPDKSN*EAVSSI
Trigger: AATGCTGGAAACAGCTTCCAAGTTGCTCTTATCAGG...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAACCACATTTGCATGCATaGCCAACAAAACCTGTGCAA +
Preference number: 5 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKPHLHA*PTKPVQ
Trigger: TTGCACAGGTTTTGTTGGCAATGCATGCAAATGTGG...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAGGTGTAATGTCACCTTaGATTCCCCTATCTTCCACA +
Preference number: 5 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKGVMSP*IPLSST
Trigger: TGTGGAAGATAGGGGAATCAAAGGTGACATTACACC...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCATCTGTTTTATGCTCTaGATCCGCGCCTGCTTCCAA +
Preference number: 5 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFICFML*IRACFQ
Trigger: TTGGAAGCAGGCGCGGATCAAGAGCATAAAACAGAT...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCAGTTGGAGTCTGAGGTaGGGAAATGGATGCAGCAAT +
Preference number: 5 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFSWSLR*GNGCSN
Trigger: ATTGCTGCATCCATTTCCCAACCTCAGACTCCAACT...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCGGAGTAAAACCTTTCTaGTCTCGGTGCTCTATACTA +
Preference number: 5 (lower is better)
Translates to: MGNGQSQMFTENRSVSKIGVKPF*SRCSIL
Trigger: TAGTATAGAGCACCGAGACAAGAAAGGTTTTACTCC...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAATCCTGTGCTCTTTATTaGCCCCTCGAGCTAACAATA +
Preference number: 5 (lower is better)
Translates to: QRTASTESYVQRGRGKEKSCALY*PLELTI
Trigger: TATTGTTAGCTCGAGGGGCAAATAAAGAGCACAGGA...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAGGAGAGATGCCCAATTaGCTACCAGTTCTAGAGTTA +
Preference number: 5 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKGEMPN*LPVLEL
Trigger: TAACTCTAGAACTGGTAGCAAATTGGGCATCTCTCC...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGCTTTGGCTTGTACTATaGACTCCATACAAAGATGAC +
Preference number: 5 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKLWLVL*TPYKDD
Trigger: GTCATCTTTGTATGGAGTCAATAGTACAAGCCAAAG...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCAGCAGCCTGTCTATCTTaGGCTTGTACTATTGACTCC +
Preference number: 5 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSAACLS*ACTIDS
Trigger: GGAGTCAATAGTACAAGCCAAAGATAGACAGGCTGC...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCGCAGCCTGTCTATCTTaGGCTTGTACTATTGACTCC +
Preference number: 5 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFAACLS*ACTIDS
Trigger: GGAGTCAATAGTACAAGCCAAAGATAGACAGGCTGC...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCATGCTGGCGTTTTTGTTaGCTTCAGCAGCCTGTCTAT +
Preference number: 5 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSCWRFC*LQQPVY
Trigger: ATAGACAGGCTGCTGAAGCAAACAAAAACGCCAGCA...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCAGAGAACCTGCCAAAGTaGTCCAGGTTGCAGATATAC +
Preference number: 5 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSENLPK*SRLQIY
Trigger: GTATATCTGCAACCTGGACAACTTTGGCAGGTTCTC...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAACTGTTAACTTCCCATTaGGAGAAGAAAGGGGAGATG +
Preference number: 5 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKLLTSH*EKKGEM
Trigger: CATCTCCCCTTTCTTCTCCAAATGGGAAGTTAACAG...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAACTGTTAACTTCCCATTaGGAGAAGAAAGGGGAGATG +
Preference number: 5 (lower is better)
Translates to: QRTASTESYVQRGRGKEKLLTSH*EKKGEM
Trigger: CATCTCCCCTTTCTTCTCCAAATGGGAAGTTAACAG...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGCTCTGGATATCACAGTaGATGGAACAGATACTTTCT +
Preference number: 5 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKLWISQ*MEQILS
Trigger: AGAAAGTATCTGTTCCATCAACTGTGATATCCAGAG...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAGCTGATGACCCTATTTaGGAATTTGCTGAGGAGCTT +
Preference number: 5 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKADDPI*EFAEEL
Trigger: AAGCTCCTCAGCAAATTCCAAAATAGGGTCATCAGC...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAATGGCAGTTTGAGATGTaGATGACAGAGCTACAGTTG +
Preference number: 5 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKWQFEM*MTELQL
Trigger: CAACTGTAGCTCTGTCATCAACATCTCAAACTGCCA...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCGTTGTTGTGGTGGCATaGGATGTCTTCACAACTGTG +
Preference number: 5 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFVVVVA*DVFTTV
Trigger: CACAGTTGTGAAGACATCCAATGCCACCACAACAAC...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCCTGGAGCAGAACTTGTaGCTAAAGGAGGAACAGTCA +
Preference number: 5 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFLEQNL*LKEEQS
Trigger: TGACTGTTCCTCCTTTAGCAACAAGTTCTGCTCCAG...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCACTGGAGCAGAACTTGTaGCTAAAGGAGGAACAGTCA +
Preference number: 5 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSLEQNL*LKEEQS
Trigger: TGACTGTTCCTCCTTTAGCAACAAGTTCTGCTCCAG...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAAAAGGGGGCACTGAAATaGGGAGCAATAGGCTTATTT +
Preference number: 5 (lower is better)
Translates to: QRTASTESYVQRGRGKEKKGALK*GAIGLF
Trigger: AAATAAGCCTATTGCTCCCAATTTCAGTGCCCCCTT...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
41% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAATATGGCGAGTCCATATaGACAATACCTGAGGGACTT +
Preference number: 5 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKYGESI*TIPEGL
Trigger: AAGTCCCTCAGGTATTGTCAATATGGACTCGCCATA...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGTTTCCCAAATGTGTaGAAGAAGGTGTTACAGAAC +
Preference number: 5 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKSFPNV*KKVLQN
Trigger: GTTCTGTAACACCTTCTTCAACACATTTGGGAAACT...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGGACCTCCTGAAATGTTaGAAGCAAAGTTTCCCAAAT +
Preference number: 5 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKDLLKC*KQSFPN
Trigger: ATTTGGGAAACTTTGCTTCAAACATTTCAGGAGGTC...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGACTGATGTAGACAAATaGCTCCCAATAACAGATGGA +
Preference number: 5 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKTDVDK*LPITDG
Trigger: TCCATCTGTTATTGGGAGCAATTTGTCTACATCAGT...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCCCAGTCTACTTTGTCTaGATTGCCACCAATCCCTTC +
Preference number: 5 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFPVYFV*IATNPF
Trigger: GAAGGGATTGGTGGCAATCAAGACAAAGTAGACTGG...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCCTACTGGAGGAATCATaGCATTCCCATACACAGAAA +
Preference number: 5 (lower is better)
Translates to: MGNGQSQMFTENRSVSKILLEES*HSHTQK
Trigger: TTTCTGTGTATGGGAATGCAATGATTCCTCCAGTAG...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCTGTTCCTCCCTTGTTTaGTTGAGCTCCTCGATCTTC +
Preference number: 5 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFCSSLV*LSSSIF
Trigger: GAAGATCGAGGAGCTCAACAAAACAAGGGAGGAACA...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGCTGCTGTTGCTGAAGTaGAATTCTTTGAGCTTTAAC +
Preference number: 5 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKLLLLK*NSLSFN
Trigger: GTTAAAGCTCAAAGAATTCAACTTCAGCAACAGCAG...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS TCA 90 bp AGCAACTTGGAAGCTGTTTCCAGCATTGGATTTTCCAAATCATCCTaGTCCAAAATGAAAGACTCCACCTCAAGAATGTCTTCTAGAACA +
Preference number: 5 (lower is better)
Translates to: SNLEAVSSIGFSKSS*SKMKDSTSRMSSRT
Trigger: TGTTCTAGAAGACATTCTTGAGGTGGAGTCTTTCATTTTGGATCAGGATGATTTGGAAAATCCAATGCTGGAAACAGCTTCCAAGTTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000509867.6
ENST00000559367.1
CDS-3UTR CAA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCACCTGATAAGAGCAACTaGGAAGCTGTTTCCAGCATT +
Preference number: 5 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSPDKSN*EAVSSI
Trigger: AATGCTGGAAACAGCTTCCAAGTTGCTCTTATCAGG...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCACCACATTTGCATGCATaGCCAACAAAACCTGTGCAA +
Preference number: 5 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSPHLHA*PTKPVQ
Trigger: TTGCACAGGTTTTGTTGGCAATGCATGCAAATGTGG...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCGGTGTAATGTCACCTTaGATTCCCCTATCTTCCACA +
Preference number: 5 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFGVMSP*IPLSST
Trigger: TGTGGAAGATAGGGGAATCAAAGGTGACATTACACC...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCAGGTGTAATGTCACCTTaGATTCCCCTATCTTCCACA +
Preference number: 5 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSGVMSP*IPLSST
Trigger: TGTGGAAGATAGGGGAATCAAAGGTGACATTACACC...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAACATGACCAGCTCTaGCAGCTTTCATTAAAGGAG +
Preference number: 5 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKKHDQL*QLSLKE
Trigger: CTCCTTTAATGAAAGCTGCAAGAGCTGGTCATGTTT...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCTCCTGTGCTCTTTATTaGCCCCTCGAGCTAACAATA +
Preference number: 5 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFSCALY*PLELTI
Trigger: TATTGTTAGCTCGAGGGGCAAATAAAGAGCACAGGA...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCGGAGAGATGCCCAATTaGCTACCAGTTCTAGAGTTA +
Preference number: 5 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFGEMPN*LPVLEL
Trigger: TAACTCTAGAACTGGTAGCAAATTGGGCATCTCTCC...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCAAAAATGCTGGCGTTTTaGTTTGCTTCAGCAGCCTGT +
Preference number: 5 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSKMLAF*FASAAC
Trigger: ACAGGCTGCTGAAGCAAACAAAAACGCCAGCATTTT...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGTTTTTCTTGAGCAGCTaGGAGTTCAAAGTTCTCTTT +
Preference number: 5 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKFFLSS*EFKVLF
Trigger: AAAGAGAACTTTGAACTCCAAGCTGCTCAAGAAAAA...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAAAACTCCCGAATAGCATaGATATTACAGCCTCCTCTT +
Preference number: 5 (lower is better)
Translates to: QRTASTESYVQRGRGKEKNSRIA*ILQPPL
Trigger: AAGAGGAGGCTGTAATATCAATGCTATTCGGGAGTT...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
40% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCATCCGGTCTCCAGTCTaGTCTTTCTGTTTATCAATA +
Preference number: 5 (lower is better)
Translates to: MGNGQSQMFTENRSVSKIIRSPV*SFCLSI
Trigger: TATTGATAAACAGAAAGACAAGACTGGAGACCGGAT...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCACCCTATTTTGGAATTaGCTGAGGAGCTTTTCAAAC +
Preference number: 5 (lower is better)
Translates to: MGNGQSQMFTENRSVSKITLFWN*LRSFSN
Trigger: GTTTGAAAAGCTCCTCAGCAAATTCCAAAATAGGGT...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCAAAGGGGGCACTGAAATaGGGAGCAATAGGCTTATTT +
Preference number: 5 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSKGALK*GAIGLF
Trigger: AAATAAGCCTATTGCTCCCAATTTCAGTGCCCCCTT...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCAGTTTCCCAAATGTGTaGAAGAAGGTGTTACAGAAC +
Preference number: 5 (lower is better)
Translates to: MGNGQSQMFTENRSVSKISFPNV*KKVLQN
Trigger: GTTCTGTAACACCTTCTTCAACACATTTGGGAAACT...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCGACCTCCTGAAATGTTaGAAGCAAAGTTTCCCAAAT +
Preference number: 5 (lower is better)
Translates to: MGNGQSQMFTENRSVSKIDLLKC*KQSFPN
Trigger: ATTTGGGAAACTTTGCTTCAAACATTTCAGGAGGTC...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCAGTGCAGAAGAATCATTaGATGCTGATGAACACGGAG +
Preference number: 5 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSVQKNH*MLMNTE
Trigger: CTCCGTGTTCATCAGCATCAAATGATTCTTCTGCAC...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCGTGCAGAAGAATCATTaGATGCTGATGAACACGGAG +
Preference number: 5 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFVQKNH*MLMNTE
Trigger: CTCCGTGTTCATCAGCATCAAATGATTCTTCTGCAC...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAACTACTGGAGGAATCATaGCATTCCCATACACAGAAA +
Preference number: 5 (lower is better)
Translates to: QRTASTESYVQRGRGKEKLLEES*HSHTQK
Trigger: TTTCTGTGTATGGGAATGCAATGATTCCTCCAGTAG...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAAGCTAAATTTCCGTGTTaGCTCAGAAGCAGTTTACAG +
Preference number: 5 (lower is better)
Translates to: QRTASTESYVQRGRGKEKAKFPC*LRSSLQ
Trigger: CTGTAAACTGCTTCTGAGCAAACACGGAAATTTAGC...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAATCCAACTATCACTCCTaGCAGTTCTGTAAGATTTGC +
Preference number: 5 (lower is better)
Translates to: QRTASTESYVQRGRGKEKSNYHS*QFCKIC
Trigger: GCAAATCTTACAGAACTGCAAGGAGTGATAGTTGGA...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAATCCAACTATCACTCCTaGCAGTTCTGTAAGATTTGC +
Preference number: 5 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKSNYHS*QFCKIC
Trigger: GCAAATCTTACAGAACTGCAAGGAGTGATAGTTGGA...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCCAGAATATTAAGAGCTaGTATATGCTGACTGGGAAC +
Preference number: 5 (lower is better)
Translates to: MGNGQSQMFTENRSVSKIQNIKS*YMLTGN
Trigger: GTTCCCAGTCAGCATATACAAGCTCTTAATATTCTG...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358602.9
ENST00000558247.5
CDS-3UTR CAA 90 bp AAAACCAACCAGCCAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGGTGTATTTAGGTTATTaGAGTCAAAACACGGATGGA +
Preference number: 5 (lower is better)
Translates to: KTNQPKNSFNRKLCPKGKVYLGY*SQNTDG
Trigger: TCCATCCGTGTTTTGACTCAAATAACCTAAATACAC...CTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTGGCTGGTTGGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358602.9
CDS TCA 90 bp CTCTGTAATGGTGGTCTAAAACCTGGAGCTTTGGAAGTATCAGACTaGTGTAAAGGATCTGAATTTGGCAAATATGAGGATTTTCCTGAT +
Preference number: 5 (lower is better)
Translates to: LCNGGLKPGALEVSD*CKGSEFGKYEDFPD
Trigger: ATCAGGAAAATCCTCATATTTGCCAAATTCAGATCCTTTACATCAGTCTGATACTTCCAAAGCTCCAGGTTTTAGACCACCATTACAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCTGTTTCCAGCATaGGATTTTCCAAATCATCCT +
Preference number: 5 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKKLFPA*DFPNHP
Trigger: AGGATGATTTGGAAAATCCAATGCTGGAAACAGCTT...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAGCAACTTCACAATTTaGACATGTCCTCCATTAGCA +
Preference number: 5 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKSNFTI*TCPPLA
Trigger: TGCTAATGGAGGACATGTCAAAATTGTGAAGTTGCT...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCATATGTAAGTGCTGTATaGCCTGTTGAAGACTGTGCA +
Preference number: 5 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSYVSAV*PVEDCA
Trigger: TGCACAGTCTTCAACAGGCAATACAGCACTTACATA...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCTATGTAAGTGCTGTATaGCCTGTTGAAGACTGTGCA +
Preference number: 5 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFYVSAV*PVEDCA
Trigger: TGCACAGTCTTCAACAGGCAATACAGCACTTACATA...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCAAACATGACCAGCTCTaGCAGCTTTCATTAAAGGAG +
Preference number: 5 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFKHDQL*QLSLKE
Trigger: CTCCTTTAATGAAAGCTGCAAGAGCTGGTCATGTTT...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCAGGAGTAAAACCTTTCTaGTCTCGGTGCTCTATACTA +
Preference number: 5 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSGVKPF*SRCSIL
Trigger: TAGTATAGAGCACCGAGACAAGAAAGGTTTTACTCC...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCCTCTGTGTTCAACATTaGCTTTTCTATCAAGCAGAA +
Preference number: 5 (lower is better)
Translates to: MGNGQSQMFTENRSVSKILCVQH*LFYQAE
Trigger: TTCTGCTTGATAGAAAAGCAAATGTTGAACACAGAG...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAACTTTGGCTTGTACTATaGACTCCATACAAAGATGAC +
Preference number: 5 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKLWLVL*TPYKDD
Trigger: GTCATCTTTGTATGGAGTCAATAGTACAAGCCAAAG...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCGCTGACTGTATGAAATaGGTAGTGGATCATCAAATA +
Preference number: 5 (lower is better)
Translates to: MGNGQSQMFTENRSVSKIADCMK*VVDHQI
Trigger: TATTTGATGATCCACTACCAATTTCATACAGTCAGC...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAACTCTGGATATCACAGTaGATGGAACAGATACTTTCT +
Preference number: 5 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKLWISQ*MEQILS
Trigger: AGAAAGTATCTGTTCCATCAACTGTGATATCCAGAG...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAACTCTGGATATCACAGTaGATGGAACAGATACTTTCT +
Preference number: 5 (lower is better)
Translates to: QRTASTESYVQRGRGKEKLWISQ*MEQILS
Trigger: AGAAAGTATCTGTTCCATCAACTGTGATATCCAGAG...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCAAACTCCCGAATAGCATaGATATTACAGCCTCCTCTT +
Preference number: 5 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSNSRIA*ILQPPL
Trigger: AAGAGGAGGCTGTAATATCAATGCTATTCGGGAGTT...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAAATCCGGTCTCCAGTCTaGTCTTTCTGTTTATCAATA +
Preference number: 5 (lower is better)
Translates to: QRTASTESYVQRGRGKEKIRSPV*SFCLSI
Trigger: TATTGATAAACAGAAAGACAAGACTGGAGACCGGAT...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGATGCCACTTTATTaGGAGATGCTGATCCACAAT +
Preference number: 5 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKKMPLY*EMLIHN
Trigger: ATTGTGGATCAGCATCTCCAAATAAAGTGGCATCTT...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAAAAGATGCCACTTTATTaGGAGATGCTGATCCACAAT +
Preference number: 5 (lower is better)
Translates to: QRTASTESYVQRGRGKEKKMPLY*EMLIHN
Trigger: ATTGTGGATCAGCATCTCCAAATAAAGTGGCATCTT...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
39% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCAAAGCGGGGAAAAATGTaGTCTGTTAAAGTTAGCAGC +
Preference number: 5 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSKRGKM*SVKVSS
Trigger: GCTGCTAACTTTAACAGACAACATTTTTCCCCGCTT...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAAACTGATGTAGACAAATaGCTCCCAATAACAGATGGA +
Preference number: 5 (lower is better)
Translates to: QRTASTESYVQRGRGKEKTDVDK*LPITDG
Trigger: TCCATCTGTTATTGGGAGCAATTTGTCTACATCAGT...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAACTGATGTAGACAAATaGCTCCCAATAACAGATGGA +
Preference number: 5 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKTDVDK*LPITDG
Trigger: TCCATCTGTTATTGGGAGCAATTTGTCTACATCAGT...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAACTGCTGTTGCTGAAGTaGAATTCTTTGAGCTTTAAC +
Preference number: 5 (lower is better)
Translates to: QRTASTESYVQRGRGKEKLLLLK*NSLSFN
Trigger: GTTAAAGCTCAAAGAATTCAACTTCAGCAACAGCAG...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCATCCAACTATCACTCCTaGCAGTTCTGTAAGATTTGC +
Preference number: 5 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSSNYHS*QFCKIC
Trigger: GCAAATCTTACAGAACTGCAAGGAGTGATAGTTGGA...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAACAGAATATTAAGAGCTaGTATATGCTGACTGGGAAC +
Preference number: 5 (lower is better)
Translates to: QRTASTESYVQRGRGKEKQNIKS*YMLTGN
Trigger: GTTCCCAGTCAGCATATACAAGCTCTTAATATTCTG...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358602.9
ENST00000558247.5
CDS-3UTR CAA 90 bp ATGGGGAATGGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCGCTCTCCCTTTAAATTaGGGCATATTAAACATAGGT +
Preference number: 5 (lower is better)
Translates to: MGNGQSQMFTENRSVSKIALPLN*GILNIG
Trigger: ACCTATGTTTAATATGCCCAAATTTAAAGGGAGAGC...GATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCCATTCCCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358602.9
CDS-3UTR CAA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCAAGCAACTTCACAATTTaGACATGTCCTCCATTAGCA +
Preference number: 5 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSSNFTI*TCPPLA
Trigger: TGCTAATGGAGGACATGTCAAAATTGTGAAGTTGCT...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAACTCTGTGTTCAACATTaGCTTTTCTATCAAGCAGAA +
Preference number: 5 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKLCVQH*LFYQAE
Trigger: TTCTGCTTGATAGAAAAGCAAATGTTGAACACAGAG...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAACTCTGTGTTCAACATTaGCTTTTCTATCAAGCAGAA +
Preference number: 5 (lower is better)
Translates to: QRTASTESYVQRGRGKEKLCVQH*LFYQAE
Trigger: TTCTGCTTGATAGAAAAGCAAATGTTGAACACAGAG...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAATTTTTCTTGAGCAGCTaGGAGTTCAAAGTTCTCTTT +
Preference number: 5 (lower is better)
Translates to: QRTASTESYVQRGRGKEKFFLSS*EFKVLF
Trigger: AAAGAGAACTTTGAACTCCAAGCTGCTCAAGAAAAA...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp GGGCAGTCACAAATGTTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAATTTTTCTTGAGCAGCTaGGAGTTCAAAGTTCTCTTT +
Preference number: 5 (lower is better)
Translates to: GQSQMFTENRSVSKIFCKFFLSS*EFKVLF
Trigger: AAAGAGAACTTTGAACTCCAAGCTGCTCAAGAAAAA...TTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAACATTTGTGACTGCCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp CAAAGAACAGCTTCAACAGAAAGTTATGTCCAAAGGGGAAGAGGGAAAGAAAAAGCTGACTGTATGAAATaGGTAGTGGATCATCAAATA +
Preference number: 5 (lower is better)
Translates to: QRTASTESYVQRGRGKEKADCMK*VVDHQI
Trigger: TATTTGATGATCCACTACCAATTTCATACAGTCAGC...TTTTTCTTTCCCTCTTCCCCTTTGGACATAACTTTCTGTTGAAGCTGTTCTTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCAATCCGGTCTCCAGTCTaGTCTTTCTGTTTATCAATA +
Preference number: 5 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSIRSPV*SFCLSI
Trigger: TATTGATAAACAGAAAGACAAGACTGGAGACCGGAT...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCAACCCTATTTTGGAATTaGCTGAGGAGCTTTTCAAAC +
Preference number: 5 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSTLFWN*LRSFSN
Trigger: GTTTGAAAAGCTCCTCAGCAAATTCCAAAATAGGGT...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp TTCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCAAGATGCCACTTTATTaGGAGATGCTGATCCACAAT +
Preference number: 5 (lower is better)
Translates to: FTENRSVSKIFCKKPTHFKMPLY*EMLIHN
Trigger: ATTGTGGATCAGCATCTCCAAATAAAGTGGCATCTT...GAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCAGACCTCCTGAAATGTTaGAAGCAAAGTTTCCCAAAT +
Preference number: 5 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSDLLKC*KQSFPN
Trigger: ATTTGGGAAACTTTGCTTCAAACATTTCAGGAGGTC...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCAACTGATGTAGACAAATaGCTCCCAATAACAGATGGA +
Preference number: 5 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSTDVDK*LPITDG
Trigger: TCCATCTGTTATTGGGAGCAATTTGTCTACATCAGT...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS-3UTR CAA 90 bp TCACAGAAAATAGGTCAGTTAGTAAGATCTTCTGCAAAAAGCCTACACACTTCACTCTGTGTTCAACATTaGCTTTTCTATCAAGCAGAA +
Preference number: 5 (lower is better)
Translates to: SQKIGQLVRSSAKSLHTSLCVQH*LFYQAE
Trigger: TTCTGCTTGATAGAAAAGCAAATGTTGAACACAGAG...TGAAGTGTGTAGGCTTTTTGCAGAAGATCTTACTAACTGACCTATTTTCTGTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS GCA 72 bp GCACCATCCCACGAGGAGACGAGGCCGAGCGAGCTCTaGTGCTGCCGCCAACGCCGCCGCCGACCTCCGCCG +
Preference number: 6 (lower is better)
Translates to: APSHEETRPSEL*CCRQRRRRPPP
Trigger: CGGCGGAGGTCGGCGGCGGCGTTGGCGGCAGCAGCAGAGCTCGCTCGGCCTCGTCTCCTCGTGGGATGGTGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000561029.1
ENST00000639793.1
CDS CCA 72 bp GCGTGGGGCTACGCTCTACCGCGACTTCGGCCGCACTaGGGCCGACACAGCAATCGGTGCCGCCTCCGCCGC +
Preference number: 6 (lower is better)
Translates to: AWGYALPRLRPH*GRHSNRCRLRR
Trigger: GCGGCGGAGGCGGCACCGATTGCTGTGTCGGCCCCAGTGCGGCCGAAGTCGCGGTAGAGCGTAGCCCCACGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000561029.1
ENST00000639793.1
CDS GCA 72 bp GGGGGTCGGCAAGTCCGGTTACGCTTGGCCTTGTGGTaGTGCTGCTGCGGCGGCTTCTTCTTCAGGAGCAGG +
Preference number: 6 (lower is better)
Translates to: GGRQVRLRLALW*CCCGGFFFRSR
Trigger: CCTGCTCCTGAAGAAGAAGCCGCCGCAGCAGCAGCACCACAAGGCCAAGCGTAACCGGACTTGCCGACCCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000561029.1
ENST00000639793.1
CDS GCA 72 bp GGTCGGCAAGTCCGGTTACGCTTGGCCTTGTGGTGCTaGTGCTGCGGCGGCTTCTTCTTCAGGAGCAGGTCG +
Preference number: 6 (lower is better)
Translates to: GRQVRLRLALWC*CCGGFFFRSRS
Trigger: CGACCTGCTCCTGAAGAAGAAGCCGCCGCAGCAGCAGCACCACAAGGCCAAGCGTAACCGGACTTGCCGACC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000561029.1
ENST00000639793.1
CDS CAA 72 bp CCCTGGAGGCAAGGGACCTGCCGCCAGAGGCAAAGCTaGAGGCATCGCCAGAGGCTGGATTGGCGCAAAACC +
Preference number: 6 (lower is better)
Translates to: PWRQGTCRQRQS*RHRQRLDWRKT
Trigger: GGTTTTGCGCCAATCCAGCCTCTGGCGATGCCTCAAGCTTTGCCTCTGGCGGCAGGTCCCTTGCCTCCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000514252.1
ENST00000558247.5
ENST00000561029.1
ENST00000639793.1
CDS CAA 90 bp TGCGATGGACCCTGGAGGCAAGGGACCTGCCGCCAGAGGCAAAGCTaGAGGCATCGCCAGAGGCTGGATTGGCGCAAAACCCATCTGAGC +
Preference number: 6 (lower is better)
Translates to: CDGPWRQGTCRQRQS*RHRQRLDWRKTHLS
Trigger: GCTCAGATGGGTTTTGCGCCAATCCAGCCTCTGGCGATGCCTCAAGCTTTGCCTCTGGCGGCAGGTCCCTTGCCTCCAGGGTCCATCGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000514252.1
ENST00000558247.5
ENST00000561029.1
ENST00000639793.1
CDS GCA 72 bp CAAGTCCGGTTACGCTTGGCCTTGTGGTGCTGCTGCTaGGGCGGCTTCTTCTTCAGGAGCAGGTCGCAGACT +
Preference number: 6 (lower is better)
Translates to: QVRLRLALWCCC*GGFFFRSRSQT
Trigger: AGTCTGCGACCTGCTCCTGAAGAAGAAGCCGCCGCAGCAGCAGCACCACAAGGCCAAGCGTAACCGGACTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000561029.1
ENST00000639793.1
CDS GCA 72 bp TGTAAGATTTGCGATGGACCCTGGAGGCAAGGGACCTaGCGCCAGAGGCAAAGCTTGAGGCATCGCCAGAGG +
Preference number: 6 (lower is better)
Translates to: CKICDGPWRQGT*RQRQSLRHRQR
Trigger: CCTCTGGCGATGCCTCAAGCTTTGCCTCTGGCGGCAGGTCCCTTGCCTCCAGGGTCCATCGCAAATCTTACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000514252.1
ENST00000558247.5
ENST00000561029.1
ENST00000639793.1
CDS CCA 72 bp CAGAGGCAAAGCTTGAGGCATCGCCAGAGGCTGGATTaGCGCAAAACCCATCTGAGCAGCAGTCTGCTGGGG +
Preference number: 6 (lower is better)
Translates to: QRQSLRHRQRLD*RKTHLSSSLLG
Trigger: CCCCAGCAGACTGCTGCTCAGATGGGTTTTGCGCCAATCCAGCCTCTGGCGATGCCTCAAGCTTTGCCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000514252.1
ENST00000558247.5
ENST00000561029.1
ENST00000639793.1
CDS CAA 90 bp GACCTGCCGCCAGAGGCAAAGCTTGAGGCATCGCCAGAGGCTGGATaGGCGCAAAACCCATCTGAGCAGCAGTCTGCTGGGGTTCATCTT +
Preference number: 6 (lower is better)
Translates to: DLPPEAKLEASPEAG*AQNPSEQQSAGVHL
Trigger: AAGATGAACCCCAGCAGACTGCTGCTCAGATGGGTTTTGCGCCAATCCAGCCTCTGGCGATGCCTCAAGCTTTGCCTCTGGCGGCAGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000514252.1
ENST00000558247.5
ENST00000561029.1
ENST00000639793.1
CDS CCA 72 bp CGGGGGAGGAACCTGAGACTGCTGAAGAGGTGGTCTTaGTTCCTGAGAAACAGATCCCGGAGGTTGTTGCTG +
Preference number: 6 (lower is better)
Translates to: RGRNLRLLKRWS*FLRNRSRRLLL
Trigger: CAGCAACAACCTCCGGGATCTGTTTCTCAGGAACCAAGACCACCTCTTCAGCAGTCTCAGGTTCCTCCCCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS CCA 72 bp GCATCCCATTGGTGTCTGAGGCATAGGGTAAGTCACTaGGGCAGTAGAAGGCACCGCCACTGGAGCAGAACT +
Preference number: 6 (lower is better)
Translates to: ASHWCLRHRVSH*GSRRHRHWSRT
Trigger: AGTTCTGCTCCAGTGGCGGTGCCTTCTACTGCCCCAGTGACTTACCCTATGCCTCAGACACCAATGGGATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS CCA 72 bp CACTCCTTGCAGTTCTGTAAGATTTGCGATGGACCCTaGAGGCAAGGGACCTGCCGCCAGAGGCAAAGCTTG +
Preference number: 6 (lower is better)
Translates to: HSLQFCKICDGP*RQGTCRQRQSL
Trigger: CAAGCTTTGCCTCTGGCGGCAGGTCCCTTGCCTCCAGGGTCCATCGCAAATCTTACAGAACTGCAAGGAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000514252.1
ENST00000558247.5
ENST00000561029.1
ENST00000639793.1
CDS CAA 90 bp TCTGGCAGGGCTCAAAGGCCTGACAGGAAACGGACCCCAAGTGGATaGAGCTGGTGGAAAAGTACCTCCAAAGTGGGTCATGGGCAACCT +
Preference number: 6 (lower is better)
Translates to: SGRAQRPDRKRTPSG*SWWKSTSKVGHGQP
Trigger: AGGTTGCCCATGACCCACTTTGGAGGTACTTTTCCACCAGCTCAATCCACTTGGGGTCCGTTTCCTGTCAGGCCTTTGAGCCCTGCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS GCA 72 bp GCCAAGCTGGTTCATATGCACACTGTTCATGTGAGGTaGCCAGGGTCCAGTCCACACCGTTTGAGGGCCATT +
Preference number: 6 (lower is better)
Translates to: AKLVHMHTVHVR*PGSSPHRLRAI
Trigger: AATGGCCCTCAAACGGTGTGGACTGGACCCTGGGCACCTCACATGAACAGTGTGCATATGAACCAGCTTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS CCA 72 bp CAGGTGGTTTGTCAGGCTCCTGAGGTGGAACAACCATaGGCAGTGCTTGAACTGGTACACGAGGAGCCCTAT +
Preference number: 6 (lower is better)
Translates to: QVVCQAPEVEQP*AVLELVHEEPY
Trigger: ATAGGGCTCCTCGTGTACCAGTTCAAGCACTGCCCATGGTTGTTCCACCTCAGGAGCCTGACAAACCACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000514252.1
ENST00000558247.5
ENST00000639793.1
CDS CCA 72 bp GGCAACATTGGCAGGTGGTTTGTCAGGCTCCTGAGGTaGAACAACCATGGGCAGTGCTTGAACTGGTACACG +
Preference number: 6 (lower is better)
Translates to: GNIGRWFVRLLR*NNHGQCLNWYT
Trigger: CGTGTACCAGTTCAAGCACTGCCCATGGTTGTTCCACCTCAGGAGCCTGACAAACCACCTGCCAATGTTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000514252.1
ENST00000558247.5
ENST00000639793.1
CDS CCA 72 bp GCTCCTCTCTCTAGCAGTGTTTGTACCAGTTCCTCGTaGCCACCAGCACAGGCAAGTGTTAGTGCCGTGTCA +
Preference number: 6 (lower is better)
Translates to: APLSSSVCTSSS*PPAQASVSAVS
Trigger: TGACACGGCACTAACACTTGCCTGTGCTGGTGGCCACGAGGAACTGGTACAAACACTGCTAGAGAGAGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000514252.1
ENST00000558247.5
ENST00000561029.1
ENST00000639793.1
CDS CCA 72 bp AACTTCCGGGGGAGGAACCTGAGACTGCTGAAGAGGTaGTCTTGGTTCCTGAGAAACAGATCCCGGAGGTTG +
Preference number: 6 (lower is better)
Translates to: NFRGRNLRLLKR*SWFLRNRSRRL
Trigger: CAACCTCCGGGATCTGTTTCTCAGGAACCAAGACCACCTCTTCAGCAGTCTCAGGTTCCTCCCCCGGAAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS CAA 72 bp TGTCAGAATTCCTTGCCCCAGCCCTGCCAACTGTGCTaGGCCCAGTACTGGCTGTCCAACTATCACTCCTTG +
Preference number: 6 (lower is better)
Translates to: CQNSLPQPCQLC*AQYWLSNYHSL
Trigger: CAAGGAGTGATAGTTGGACAGCCAGTACTGGGCCAAGCACAGTTGGCAGGGCTGGGGCAAGGAATTCTGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000514252.1
ENST00000558247.5
ENST00000561029.1
ENST00000639793.1
CDS GCA 72 bp TTCTGCCAAACTGCGGTTGTCCGACTGCCCTGCATTTaGTGTGCTTTCAGCTCTCATACGGGTAAGTGCAGC +
Preference number: 6 (lower is better)
Translates to: FCQTAVVRLPCI*CAFSSHTGKCS
Trigger: GCTGCACTTACCCGTATGAGAGCTGAAAGCACAGCAAATGCAGGGCAGTCGGACAACCGCAGTTTGGCAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
ENST00000639793.1
CDS GCA 72 bp GCTTGGCCCAGTACTGGCTGTCCAACTATCACTCCTTaGAGTTCTGTAAGATTTGCGATGGACCCTGGAGGC +
Preference number: 6 (lower is better)
Translates to: AWPSTGCPTITP*SSVRFAMDPGG
Trigger: GCCTCCAGGGTCCATCGCAAATCTTACAGAACTGCAAGGAGTGATAGTTGGACAGCCAGTACTGGGCCAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000514252.1
ENST00000558247.5
ENST00000561029.1
ENST00000639793.1
CDS CCA 72 bp ATTCCTGATGGGAAGAGTGGTGGCAACATTGGCAGGTaGTTTGTCAGGCTCCTGAGGTGGAACAACCATGGG +
Preference number: 6 (lower is better)
Translates to: IPDGKSGGNIGR*FVRLLRWNNHG
Trigger: CCCATGGTTGTTCCACCTCAGGAGCCTGACAAACCACCTGCCAATGTTGCCACCACTCTTCCCATCAGGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000514252.1
ENST00000558247.5
ENST00000639793.1
CDS CCA 72 bp CCTGACAGGAAACGGACCCCAAGTGGATTGAGCTGGTaGAAAAGTACCTCCAAAGTGGGTCATGGGCAACCT +
Preference number: 6 (lower is better)
Translates to: PDRKRTPSGLSW*KSTSKVGHGQP
Trigger: AGGTTGCCCATGACCCACTTTGGAGGTACTTTTCCACCAGCTCAATCCACTTGGGGTCCGTTTCCTGTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS CAA 72 bp GCAGCTTTATTCCTGATGGGAAGAGTGGTGGCAACATaGGCAGGTGGTTTGTCAGGCTCCTCTTCCTCGTCG +
Preference number: 6 (lower is better)
Translates to: AALFLMGRVVAT*AGGLSGSSSSS
Trigger: CGACGAGGAAGAGGAGCCTGACAAACCACCTGCCAATGTTGCCACCACTCTTCCCATCAGGAATAAAGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561029.1
CDS CAA 90 bp ACCTCCTGTCTTCCCCCAGAACAAGCCAAGGAGAGTGGTGTGTCCTaGGTTCTTTCAGACTGGGCTTCAATGTCTGCACCATTGTCCAGC +
Preference number: 6 (lower is better)
Translates to: TSCLPPEQAKESGVS*VLSDWASMSAPLSS
Trigger: GCTGGACAATGGTGCAGACATTGAAGCCCAGTCTGAAAGAACCAAGGACACACCACTCTCCTTGGCTTGTTCTGGGGGAAGACAGGAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000514252.1
ENST00000558247.5
ENST00000561029.1
CDS TCA 72 bp ATGGGCAACCTTGGTGGACGGATCTGCTGGAAAGTCTaGGCAGCAAGCAAAGCATGTGCAAACTGTGGAGGA +
Preference number: 6 (lower is better)
Translates to: MGNLGGRICWKV*AASKACANCGG
Trigger: TCCTCCACAGTTTGCACATGCTTTGCTTGCTGCTCAGACTTTCCAGCAGATCCGTCCACCAAGGTTGCCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS TCA 72 bp CTCAAAGGCCTGACAGGAAACGGACCCCAAGTGGATTaGGCTGGTGGAAAAGTACCTCCAAAGTGGGTCATG +
Preference number: 6 (lower is better)
Translates to: LKGLTGNGPQVD*AGGKVPPKWVM
Trigger: CATGACCCACTTTGGAGGTACTTTTCCACCAGCTCAATCCACTTGGGGTCCGTTTCCTGTCAGGCCTTTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS TCA 72 bp GCTGCCATGATGTCATCCAGCGTGTCATTGAGGGTCTaGGCAGGGCTGGCTACCATTAACCCTTGTTGTGTT +
Preference number: 6 (lower is better)
Translates to: AAMMSSSVSLRV*AGLATINPCCV
Trigger: AACACAACAAGGGTTAATGGTAGCCAGCCCTGCTCAGACCCTCAATGACACGCTGGATGACATCATGGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000514252.1
ENST00000639793.1
CDS GCA 72 bp TCCTCATGTTATCACTGTCCCCACTCTCGCTGGTACTaGTGCTCTTGGACTCTCCATTCACCTTCTCTGGCT +
Preference number: 6 (lower is better)
Translates to: SSCYHCPHSRWY*CSWTLHSPSLA
Trigger: AGCCAGAGAAGGTGAATGGAGAGTCCAAGAGCAGCAGTACCAGCGAGAGTGGGGACAGTGATAACATGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000513908.1
ENST00000558247.5
CDS CAA 72 bp TGCTTGGCCCAGTACTGGCTGTCCAACTATCACTCCTaGCAGTTCTGTAAGATTTGCGATGGACCCTGGAGG +
Preference number: 6 (lower is better)
Translates to: CLAQYWLSNYHS*QFCKICDGPWR
Trigger: CCTCCAGGGTCCATCGCAAATCTTACAGAACTGCAAGGAGTGATAGTTGGACAGCCAGTACTGGGCCAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000514252.1
ENST00000558247.5
ENST00000561029.1
ENST00000639793.1
CDS CAA 90 bp TGTTTAGAAGCAGCTTTATTCCTGATGGGAAGAGTGGTGGCAACATaGGCAGGTGGTTTGTCAGGCTCCTCTTCCTCGTCGTCGTCGTCC +
Preference number: 6 (lower is better)
Translates to: CLEAALFLMGRVVAT*AGGLSGSSSSSSSS
Trigger: GGACGACGACGACGAGGAAGAGGAGCCTGACAAACCACCTGCCAATGTTGCCACCACTCTTCCCATCAGGAATAAAGCTGCTTCTAAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561029.1
CDS CAA 90 bp ATTGAGCTGGTGGAAAAGTACCTCCAAAGTGGGTCATGGGCAACCTaGGTGGACGGATCTGCTGGAAAGTCTGAGCAGCAAGCAAAGCAT +
Preference number: 6 (lower is better)
Translates to: IELVEKYLQSGSWAT*VDGSAGKSEQQAKH
Trigger: ATGCTTTGCTTGCTGCTCAGACTTTCCAGCAGATCCGTCCACCAAGGTTGCCCATGACCCACTTTGGAGGTACTTTTCCACCAGCTCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS TCA 72 bp TGGGGCAGGAGATGGTGCACGAACTCCCGAGGATACTaGCTGTGCAGAAGAATCTTAACCTCTGTGTTCACT +
Preference number: 6 (lower is better)
Translates to: WGRRWCTNSRGY*LCRRILTSVFT
Trigger: AGTGAACACAGAGGTTAAGATTCTTCTGCACAGTCAGTATCCTCGGGAGTTCGTGCACCATCTCCTGCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510127.1
CDS TCA 72 bp ACTGCCATGATGTCATCCAGCGTGTCATTGAGGGTCTaGGCAGGGCTGGCTACCATTAACCCTTGTTGTGTT +
Preference number: 6 (lower is better)
Translates to: TAMMSSSVSLRV*AGLATINPCCV
Trigger: AACACAACAAGGGTTAATGGTAGCCAGCCCTGCTCAGACCCTCAATGACACGCTGGATGACATCATGGCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558247.5
ENST00000561029.1
CDS CCA 72 bp ATTGAGCTGGTGGAAAAGTACCTCCAAAGTGGGTCATaGGCAACCTTGGTGGACGGATCTGCTGGAAAGTCT +
Preference number: 6 (lower is better)
Translates to: IELVEKYLQSGS*ATLVDGSAGKS
Trigger: AGACTTTCCAGCAGATCCGTCCACCAAGGTTGCCCATGACCCACTTTGGAGGTACTTTTCCACCAGCTCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS CCA 72 bp CCAGATGACCCCCTGCACAAGCCAGGGAGTACAGTATaGTCATTATTAGCTGTGGTTCACATTCGCTCCCTT +
Preference number: 6 (lower is better)
Translates to: PDDPLHKPGSTV*SLLAVVHIRSL
Trigger: AAGGGAGCGAATGTGAACCACAGCTAATAATGACCATACTGTACTCCCTGGCTTGTGCAGGGGGTCATCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639793.1
CDS CAA 90 bp GCAGTAGGCATAGGATATGTGGCATTTGTGGGTGCAGTGTTGTTGTaGCTTGCCGTGGTTGTGACTGTTGTTGTGGTGGCATTGGATGTC +
Preference number: 6 (lower is better)
Translates to: AVGIGYVAFVGAVLL*LAVVVTVVVVALDV
Trigger: GACATCCAATGCCACCACAACAACAGTCACAACCACGGCAAGCAACAACAACACTGCACCCACAAATGCCACATATCCTATGCCTACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS TCA 72 bp GAGCCTCTTCTACAATGCTCTCTGGAGACTGATTGGTaGTGTAACCCTGTACATCCTGGCTGTTTGCTGGCA +
Preference number: 6 (lower is better)
Translates to: EPLLQCSLETDW*CNPVHPGCLLA
Trigger: TGCCAGCAAACAGCCAGGATGTACAGGGTTACATCACCAATCAGTCTCCAGAGAGCATTGTAGAAGAGGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000514252.1
ENST00000558247.5
ENST00000561029.1
ENST00000639793.1
CDS GCA 72 bp TTGCTCCCAATAACAGATGGAGCTGACGTTCCAGTTTaGCTGATACGTGCAGAACGTTCAGTCCCAATAGGG +
Preference number: 6 (lower is better)
Translates to: LLPITDGADVPV*LIRAERSVPIG
Trigger: CCCTATTGGGACTGAACGTTCTGCACGTATCAGGCAAACTGGAACGTCAGCTCCATCTGTTATTGGGAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000510127.1
ENST00000558247.5
CDS CAA 72 bp TGTTTTGTTGAGCTCCTCGATCTTCTCCTTGGTAAGTaGGTCAGCATGAGCCAGTTCCAAGGACTGCAGCTG +
Preference number: 6 (lower is better)
Translates to: CFVELLDLLLGK*VSMSQFQGLQL
Trigger: CAGCTGCAGTCCTTGGAACTGGCTCATGCTGACCAACTTACCAAGGAGAAGATCGAGGAGCTCAACAAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000514252.1
ENST00000558247.5
ENST00000561029.1
ENST00000639793.1
CDS CAA 90 bp CCAGACTTAGAGGTGTGTAATCAGAAACATTCCTGTGCTCTTTATTaGCCCCTCGAGCTAACAATAGCTCCACCACCTCCTGTCTTCCCC +
Preference number: 6 (lower is better)
Translates to: PDLEVCNQKHSCALY*PLELTIAPPPPVFP
Trigger: GGGGAAGACAGGAGGTGGTGGAGCTATTGTTAGCTCGAGGGGCAAATAAAGAGCACAGGAATGTTTCTGATTACACACCTCTAAGTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000514252.1
ENST00000558247.5
ENST00000561029.1
CDS CAA 90 bp TTGGCAGTAGGCATAGGATATGTGGCATTTGTGGGTGCAGTGTTGTaGTTGCTTGCCGTGGTTGTGACTGTTGTTGTGGTGGCATTGGAT +
Preference number: 6 (lower is better)
Translates to: LAVGIGYVAFVGAVL*LLAVVVTVVVVALD
Trigger: ATCCAATGCCACCACAACAACAGTCACAACCACGGCAAGCAACAACAACACTGCACCCACAAATGCCACATATCCTATGCCTACTGCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS CAA 90 bp TCTTTGGCAGTAGGCATAGGATATGTGGCATTTGTGGGTGCAGTGTaGTTGTTGCTTGCCGTGGTTGTGACTGTTGTTGTGGTGGCATTG +
Preference number: 6 (lower is better)
Translates to: SLAVGIGYVAFVGAV*LLLAVVVTVVVVAL
Trigger: CAATGCCACCACAACAACAGTCACAACCACGGCAAGCAACAACAACACTGCACCCACAAATGCCACATATCCTATGCCTACTGCCAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS CAA 90 bp TTCCTCCCTTGTTTTGTTGAGCTCCTCGATCTTCTCCTTGGTAAGTaGGTCAGCATGAGCCAGTTCCAAGGACTGCAGCTGTGCATTCTT +
Preference number: 6 (lower is better)
Translates to: FLPCFVELLDLLLGK*VSMSQFQGLQLCIL
Trigger: AAGAATGCACAGCTGCAGTCCTTGGAACTGGCTCATGCTGACCAACTTACCAAGGAGAAGATCGAGGAGCTCAACAAAACAAGGGAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000514252.1
ENST00000558247.5
ENST00000561029.1
ENST00000639793.1
CDS TCA 72 bp GCTGAAGGAGAGATGATAGGACTTGGAGTTGGAGTCTaGGGTTGGGAAATGGATGCAGCAATACTGTGGGTA +
Preference number: 6 (lower is better)
Translates to: AEGEMIGLGVGV*GWEMDAAILWV
Trigger: TACCCACAGTATTGCTGCATCCATTTCCCAACCTCAGACTCCAACTCCAAGTCCTATCATCTCTCCTTCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000514252.1
ENST00000558247.5
ENST00000561029.1
ENST00000639793.1
CDS TCA 72 bp TGGCCACCAGCACAGGCAAGTGTTAGTGCCGTGTCATaGTTACTCTCAGTCTGTGCATCAATATCAATGGCA +
Preference number: 6 (lower is better)
Translates to: WPPAQASVSAVS*LLSVCASISMA
Trigger: TGCCATTGATATTGATGCACAGACTGAGAGTAATCATGACACGGCACTAACACTTGCCTGTGCTGGTGGCCA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000514252.1
ENST00000558247.5
ENST00000561029.1
ENST00000639793.1
CDS TCA 72 bp TTGTGGGTGCAGTGTTGTTGTTGCTTGCCGTGGTTGTaGCTGTTGTTGTGGTGGCATTGGATGTCTTCACAA +
Preference number: 6 (lower is better)
Translates to: LWVQCCCCLPWL*LLLWWHWMSSQ
Trigger: TTGTGAAGACATCCAATGCCACCACAACAACAGTCACAACCACGGCAAGCAACAACAACACTGCACCCACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS TCA 72 bp GGAAATGGATGCAGCAATACTGTGGGTAGGAGTGTTTaGCATTGCAGATGCTCTTCCACTGACTGCTGCCAT +
Preference number: 6 (lower is better)
Translates to: GNGCSNTVGRSV*HCRCSSTDCCH
Trigger: ATGGCAGCAGTCAGTGGAAGAGCATCTGCAATGTCAAACACTCCTACCCACAGTATTGCTGCATCCATTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000514252.1
ENST00000639793.1
CDS GCA 72 bp GAGCCCATGTCTAACAGGAGCTTAACAGCAGCTGTATaGCCATTCATAGCTGCTAACATCAGAGGAGAGATG +
Preference number: 6 (lower is better)
Translates to: EPMSNRSLTAAV*PFIAANIRGEM
Trigger: CATCTCTCCTCTGATGTTAGCAGCTATGAATGGGCATACAGCTGCTGTTAAGCTCCTGTTAGACATGGGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000514252.1
ENST00000558247.5
ENST00000561029.1
CDS GCA 72 bp ATATGTGGCATTTGTGGGTGCAGTGTTGTTGTTGCTTaGCGTGGTTGTGACTGTTGTTGTGGTGGCATTGGA +
Preference number: 6 (lower is better)
Translates to: ICGICGCSVVVA*RGCDCCCGGIG
Trigger: TCCAATGCCACCACAACAACAGTCACAACCACGGCAAGCAACAACAACACTGCACCCACAAATGCCACATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS GCA 72 bp AGGCATACCCCCAACTTTAGGAAAGTCCATGTAGCCTaGAGGAACATGCTGATGGAATGTACCAGAAGGAGT +
Preference number: 6 (lower is better)
Translates to: RHTPNFRKVHVA*RNMLMECTRRS
Trigger: ACTCCTTCTGGTACATTCCATCAGCATGTTCCTGCAGGCTACATGGACTTTCCTAAAGTTGGGGGTATGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS GCA 72 bp AGCACCATCAGGGATAGGTGCTACTGGAGGAATCATTaGATTCCCATACACAGAAAAAGGCATACCCCCAAC +
Preference number: 6 (lower is better)
Translates to: STIRDRCYWRNH*IPIHRKRHTPN
Trigger: GTTGGGGGTATGCCTTTTTCTGTGTATGGGAATGCAATGATTCCTCCAGTAGCACCTATCCCTGATGGTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS CCA 72 bp TGTTGTGAAAATACTCCTGGGTCAGACATCGGTCTGTaGATCATAGGATTTCCCATCCCAGGGTTACACCAG +
Preference number: 6 (lower is better)
Translates to: CCENTPGSDIGL*IIGFPIPGLHQ
Trigger: CTGGTGTAACCCTGGGATGGGAAATCCTATGATCCACAGACCGATGTCTGACCCAGGAGTATTTTCACAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000510127.1
ENST00000558247.5
CDS CCA 72 bp TATGGGTCCTCCAGCACCATCAGGGATAGGTGCTACTaGAGGAATCATTGCATTCCCATACACAGAAAAAGG +
Preference number: 6 (lower is better)
Translates to: YGSSSTIRDRCY*RNHCIPIHRKR
Trigger: CCTTTTTCTGTGTATGGGAATGCAATGATTCCTCCAGTAGCACCTATCCCTGATGGTGCTGGAGGACCCATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS CAA 72 bp AGGAGAGATGATAGGACTTGGAGTTGGAGTCTGAGGTaGGGAAATGGATGCAGCAATACTGTGGGTAGGAGT +
Preference number: 6 (lower is better)
Translates to: RRDDRTWSWSLR*GNGCSNTVGRS
Trigger: ACTCCTACCCACAGTATTGCTGCATCCATTTCCCAACCTCAGACTCCAACTCCAAGTCCTATCATCTCTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000514252.1
ENST00000558247.5
ENST00000561029.1
ENST00000639793.1
CDS CAA 72 bp ATAGGATATGTGGCATTTGTGGGTGCAGTGTTGTTGTaGCTTGCCGTGGTTGTGACTGTTGTTGTGGTGGCA +
Preference number: 6 (lower is better)
Translates to: IGYVAFVGAVLL*LAVVVTVVVVA
Trigger: TGCCACCACAACAACAGTCACAACCACGGCAAGCAACAACAACACTGCACCCACAAATGCCACATATCCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS CAA 72 bp GTAGGCATAGGATATGTGGCATTTGTGGGTGCAGTGTaGTTGTTGCTTGCCGTGGTTGTGACTGTTGTTGTG +
Preference number: 6 (lower is better)
Translates to: VGIGYVAFVGAV*LLLAVVVTVVV
Trigger: CACAACAACAGTCACAACCACGGCAAGCAACAACAACACTGCACCCACAAATGCCACATATCCTATGCCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS CAA 90 bp GTGTTGTTGTTGCTTGCCGTGGTTGTGACTGTTGTTGTGGTGGCATaGGATGTCTTCACAACTGTGACAAAAAGCTGCCTTCGGACAGAA +
Preference number: 6 (lower is better)
Translates to: VLLLLAVVVTVVVVA*DVFTTVTKSCLRTE
Trigger: TTCTGTCCGAAGGCAGCTTTTTGTCACAGTTGTGAAGACATCCAATGCCACCACAACAACAGTCACAACCACGGCAAGCAACAACAACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS TCA 72 bp TTGCTGCTCACAGTGGTAGTGACCACAGCTGGTGAATaGTTGTCACTCTTACGACTGCTGTTGCTGTTACTA +
Preference number: 6 (lower is better)
Translates to: LLLTVVVTTAGE*LSLLRLLLLLL
Trigger: TAGTAACAGCAACAGCAGTCGTAAGAGTGACAATCATTCACCAGCTGTGGTCACTACCACTGTGAGCAGCAA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000513908.1
ENST00000558247.5
CDS TCA 72 bp CTGTTGTTGTGGTGGCATTGGATGTCTTCACAACTGTaGCAAAAAGCTGCCTTCGGACAGAAGGTGAACTTG +
Preference number: 6 (lower is better)
Translates to: LLLWWHWMSSQL*QKAAFGQKVNL
Trigger: CAAGTTCACCTTCTGTCCGAAGGCAGCTTTTTGTCACAGTTGTGAAGACATCCAATGCCACCACAACAACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS TCA 72 bp ATCTTTATCAGTGAGTTCCAAGAAGGGTCTGCAGCATaGGGGCCATTAAATATGGGTCCTCCAGCACCATCA +
Preference number: 6 (lower is better)
Translates to: IFISEFQEGSAA*GPLNMGPPAPS
Trigger: TGATGGTGCTGGAGGACCCATATTTAATGGCCCTCATGCTGCAGACCCTTCTTGGAACTCACTGATAAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS TCA 72 bp GGAAATGGATGCAGCAATACTGTGGGTAGGAGTGTTTaGCATTGCAGATGCTCTTCCACTGACTGCCATGAT +
Preference number: 6 (lower is better)
Translates to: GNGCSNTVGRSV*HCRCSSTDCHD
Trigger: ATCATGGCAGTCAGTGGAAGAGCATCTGCAATGTCAAACACTCCTACCCACAGTATTGCTGCATCCATTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558247.5
ENST00000561029.1
CDS GCA 72 bp TCTTACGACTGCTGTTGCTGTTACTACTTTCATCGCTaGAGCTGGAAATCCTCATGTTATCACTGTCCCCAC +
Preference number: 6 (lower is better)
Translates to: SYDCCCCYYFHR*SWKSSCYHCPH
Trigger: GTGGGGACAGTGATAACATGAGGATTTCCAGCTGCAGCGATGAAAGTAGTAACAGCAACAGCAGTCGTAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000513908.1
ENST00000558247.5
CDS GCA 72 bp CAGCTGGTGAATGATTGTCACTCTTACGACTGCTGTTaGTGTTACTACTTTCATCGCTGCAGCTGGAAATCC +
Preference number: 6 (lower is better)
Translates to: QLVNDCHSYDCC*CYYFHRCSWKS
Trigger: GGATTTCCAGCTGCAGCGATGAAAGTAGTAACAGCAACAGCAGTCGTAAGAGTGACAATCATTCACCAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000513908.1
ENST00000558247.5
CDS GCA 72 bp TCCTGCGTTAATTCACTTAGGATAATGGGCTCCAGCTaGATCCATGTTGCTGCAGCTTCTAGTAAAGCTTCC +
Preference number: 6 (lower is better)
Translates to: SCVNSLRIMGSS*IHVAAASSKAS
Trigger: GGAAGCTTTACTAGAAGCTGCAGCAACATGGATGCAGCTGGAGCCCATTATCCTAAGTGAATTAACGCAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559367.1
CDS CAA 72 bp GAGGTGTGTAATCAGAAACATTCCTGTGCTCTTTATTaGCCCCTCGAGCTAACAATAGCTCCACCACCTCCT +
Preference number: 6 (lower is better)
Translates to: EVCNQKHSCALY*PLELTIAPPPP
Trigger: AGGAGGTGGTGGAGCTATTGTTAGCTCGAGGGGCAAATAAAGAGCACAGGAATGTTTCTGATTACACACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000514252.1
ENST00000558247.5
ENST00000561029.1
CDS CAA 72 bp TTGCTTGCCGTGGTTGTGACTGTTGTTGTGGTGGCATaGGATGTCTTCACAACTGTGACAAAAAGCTGCCTT +
Preference number: 6 (lower is better)
Translates to: LLAVVVTVVVVA*DVFTTVTKSCL
Trigger: AAGGCAGCTTTTTGTCACAGTTGTGAAGACATCCAATGCCACCACAACAACAGTCACAACCACGGCAAGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS CAA 90 bp CCTTCAAAGGACCAGATGCCACTATGTCCTACTGATGTAGACAAATaGCTCCCAATAACAGATGGAGCTGACGTTCCAGTTTGCCTGATA +
Preference number: 6 (lower is better)
Translates to: PSKDQMPLCPTDVDK*LPITDGADVPVCLI
Trigger: TATCAGGCAAACTGGAACGTCAGCTCCATCTGTTATTGGGAGCAATTTGTCTACATCAGTAGGACATAGTGGCATCTGGTCCTTTGAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000510127.1
ENST00000558247.5
CDS TCA 72 bp ATCAATATCAATGGCAGGGTAGATAGGAAGCATGGCTaGAGGAGAGATGATAGGACTTGGAGTTGGAGTCTG +
Preference number: 6 (lower is better)
Translates to: ININGRVDRKHG*RRDDRTWSWSL
Trigger: CAGACTCCAACTCCAAGTCCTATCATCTCTCCTTCAGCCATGCTTCCTATCTACCCTGCCATTGATATTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000514252.1
ENST00000558247.5
ENST00000561029.1
ENST00000639793.1
CDS GCA 72 bp GCCAAGATGAGTGGAGTAAAACCTTTCTTGTCTCGGTaGTCTATACTAGCTCCTCTCTCTAGCAGTGTTTGT +
Preference number: 6 (lower is better)
Translates to: AKMSGVKPFLSR*SILAPLSSSVC
Trigger: ACAAACACTGCTAGAGAGAGGAGCTAGTATAGAGCACCGAGACAAGAAAGGTTTTACTCCACTCATCTTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000514252.1
ENST00000558247.5
ENST00000561029.1
ENST00000639793.1
CDS GCA 72 bp AAGTTAAAGAACCTGCTGAATTCACCTGAGAACCACTaGTATTCTGATTGCTATGGCGAGGCACCATGTGAG +
Preference number: 6 (lower is better)
Translates to: KLKNLLNSPENH*YSDCYGEAPCE
Trigger: CTCACATGGTGCCTCGCCATAGCAATCAGAATAGCAGTGGTTCTCAGGTGAATTCAGCAGGTTCTTTAACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS GCA 72 bp ATTAAATATGGGTCCTCCAGCACCATCAGGGATAGGTaGTACTGGAGGAATCATTGCATTCCCATACACAGA +
Preference number: 6 (lower is better)
Translates to: IKYGSSSTIRDR*YWRNHCIPIHR
Trigger: TCTGTGTATGGGAATGCAATGATTCCTCCAGTAGCACCTATCCCTGATGGTGCTGGAGGACCCATATTTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS CCA 72 bp TGCAGATATACCTATGGTAGTAGTGGTTGTGGCACTTaGAGGTTCTGTCAAGACTTCAGGCTCATCTTCAAC +
Preference number: 6 (lower is better)
Translates to: CRYTYGSSGCGT*RFCQDFRLIFN
Trigger: GTTGAAGATGAGCCTGAAGTCTTGACAGAACCTCCAAGTGCCACAACCACTACTACCATAGGTATATCTGCA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000513908.1
ENST00000558247.5
CDS CAA 72 bp ATCCTGGCTGTTTGCTGGCAAATGGCTGCTGGACTTTaGTTTAGAAGCAGCTTTATTCCTGATGGGAAGAGT +
Preference number: 6 (lower is better)
Translates to: ILAVCWQMAAGL*FRSSFIPDGKS
Trigger: ACTCTTCCCATCAGGAATAAAGCTGCTTCTAAACAAAAGTCCAGCAGCCATTTGCCAGCAAACAGCCAGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358602.9
ENST00000509867.6
ENST00000514252.1
ENST00000558247.5
ENST00000561029.1
ENST00000639793.1
CDS CAA 90 bp GGAATGTACCAGAAGGAGTTACAATTCCTGTACTATCTCGCTCCATaGCTTGATGTTGTGAAAATACTCCTGGGTCAGACATCGGTCTGT +
Preference number: 6 (lower is better)
Translates to: GMYQKELQFLYYLAP*LDVVKILLGQTSVC
Trigger: ACAGACCGATGTCTGACCCAGGAGTATTTTCACAACATCAAGCAATGGAGCGAGATAGTACAGGAATTGTAACTCCTTCTGGTACATTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000510127.1
ENST00000558247.5
CDS TCA 72 bp CCAGCATTGGATTTTCCAAATCATCCTGATCCAAAATaGAAGACTCCACCTCAGAAACCTCCTCTTCCTCGT +
Preference number: 6 (lower is better)
Translates to: PALDFPNHPDPK*KTPPQKPPLPR
Trigger: ACGAGGAAGAGGAGGTTTCTGAGGTGGAGTCTTTCATTTTGGATCAGGATGATTTGGAAAATCCAATGCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000558247.5
ENST00000639793.1
CDS TCA 72 bp GGAAATGGATGCAGCAATACTGTGGGTAGGAGTGTTTaGCATTGCAGATGCTCTTCCACTGACTGCTTTATT +
Preference number: 6 (lower is better)
Translates to: GNGCSNTVGRSV*HCRCSSTDCFI
Trigger: AATAAAGCAGTCAGTGGAAGAGCATCTGCAATGTCAAACACTCCTACCCACAGTATTGCTGCATCCATTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330838.10
CDS TCA 72 bp AATCCCTTCAAAGGACCAGATGCCACTATGTCCTACTaGTGTAGACAAATTGCTCCCAATAACAGATGGAGC +
Preference number: 6 (lower is better)
Translates to: NPFKGPDATMSY*CRQIAPNNRWS
Trigger: GCTCCATCTGTTATTGGGAGCAATTTGTCTACATCAGTAGGACATAGTGGCATCTGGTCCTTTGAAGGGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000510127.1
ENST00000558247.5
CDS TCA 72 bp AATTCCTGTACTATCTCGCTCCATTGCTTGATGTTGTaGAAATACTCCTGGGTCAGACATCGGTCTGTGGAT +
Preference number: 6 (lower is better)
Translates to: NSCTISLHCLML*KYSWVRHRSVD
Trigger: ATCCACAGACCGATGTCTGACCCAGGAGTATTTTCACAACATCAAGCAATGGAGCGAGATAGTACAGGAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000510127.1
ENST00000558247.5
CDS GCA 72 bp TCTTTTACCATGAGAACCTGCCAAAGTTGTCCAGGTTaGAGATATACCTATGGTAGTAGTGGTTGTGGCACT +
Preference number: 6 (lower is better)
Translates to: SFTMRTCQSCPG*RYTYGSSGCGT
Trigger: AGTGCCACAACCACTACTACCATAGGTATATCTGCAACCTGGACAACTTTGGCAGGTTCTCATGGTAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000513908.1
ENST00000558247.5
CDS GCA 72 bp TCTAGTGTTTGTTGTTTCTACTACTGGTGGACTACCTaGTTCCTGTTCGGAGGAAGATGCCACTTTATTTGG +
Preference number: 6 (lower is better)
Translates to: SSVCCFYYWWTT*FLFGGRCHFIW
Trigger: CCAAATAAAGTGGCATCTTCCTCCGAACAGGAAGCAGGTAGTCCACCAGTAGTAGAAACAACAAACACTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS CAA 72 bp TTCATAGCTGCTAACATCAGAGGAGAGATGCCCAATTaGCTACCAGTTCTAGAGTTAATCTCAGCTCCTGCA +
Preference number: 6 (lower is better)
Translates to: FIAANIRGEMPN*LPVLELISAPA
Trigger: TGCAGGAGCTGAGATTAACTCTAGAACTGGTAGCAAATTGGGCATCTCTCCTCTGATGTTAGCAGCTATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000514252.1
ENST00000558247.5
ENST00000561029.1
CDS TCA 72 bp GAAGCTGTTTCCAGCATTGGATTTTCCAAATCATCCTaGTCCAAAATGAAAGACTCCACCTCAGAAACCTCC +
Preference number: 6 (lower is better)
Translates to: EAVSSIGFSKSS*SKMKDSTSETS
Trigger: GGAGGTTTCTGAGGTGGAGTCTTTCATTTTGGATCAGGATGATTTGGAAAATCCAATGCTGGAAACAGCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000558247.5
ENST00000639793.1
CDS TCA 72 bp TGCTTCAGCAGCCTGTCTATCTTTGGCTTGTACTATTaGCTCCATACAAAGATGACACTTCTTCAGCATCTC +
Preference number: 6 (lower is better)
Translates to: CFSSLSIFGLYY*LHTKMTLLQHL
Trigger: GAGATGCTGAAGAAGTGTCATCTTTGTATGGAGTCAATAGTACAAGCCAAAGATAGACAGGCTGCTGAAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000514252.1
ENST00000558247.5
ENST00000561029.1
CDS TCA 72 bp GGAGCAATAGGCTTATTTGCTGGATGTACTGAATTCTaGCAAGCACTTTGTGTACTTAAGGTCGAAGGTAGC +
Preference number: 6 (lower is better)
Translates to: GAIGLFAGCTEF*QALCVLKVEGS
Trigger: GCTACCTTCGACCTTAAGTACACAAAGTGCTTGTCAGAATTCAGTACATCCAGCAAATAAGCCTATTGCTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS CAA 72 bp TCCAAGTCTAACTCCTCTAACAAAATGCTGGCGTTTTaGTTTGCTTCAGCAGCCTGTCTATCTTTGGCTTGT +
Preference number: 6 (lower is better)
Translates to: SKSNSSNKMLAF*FASAACLSLAC
Trigger: ACAAGCCAAAGATAGACAGGCTGCTGAAGCAAACAAAAACGCCAGCATTTTGTTAGAGGAGTTAGACTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000514252.1
ENST00000558247.5
ENST00000561029.1
CDS CAA 72 bp GTGCCACCCCTTATAGTGATTATCCGGTCTCCAGTCTaGTCTTTCTGTTTATCAATATCTATGTGTGCACCA +
Preference number: 6 (lower is better)
Translates to: VPPLIVIIRSPV*SFCLSISMCAP
Trigger: TGGTGCACACATAGATATTGATAAACAGAAAGACAAGACTGGAGACCGGATAATCACTATAAGGGGTGGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS CAA 72 bp CAGAAGGAGTTACAATTCCTGTACTATCTCGCTCCATaGCTTGATGTTGTGAAAATACTCCTGGGTCAGACA +
Preference number: 6 (lower is better)
Translates to: QKELQFLYYLAP*LDVVKILLGQT
Trigger: TGTCTGACCCAGGAGTATTTTCACAACATCAAGCAATGGAGCGAGATAGTACAGGAATTGTAACTCCTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000510127.1
ENST00000558247.5
CDS CAA 90 bp GTTGATTCAGTGCCACCCCTTATAGTGATTATCCGGTCTCCAGTCTaGTCTTTCTGTTTATCAATATCTATGTGTGCACCAGTAAACTCC +
Preference number: 6 (lower is better)
Translates to: VDSVPPLIVIIRSPV*SFCLSISMCAPVNS
Trigger: GGAGTTTACTGGTGCACACATAGATATTGATAAACAGAAAGACAAGACTGGAGACCGGATAATCACTATAAGGGGTGGCACTGAATCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS GCA 72 bp TGTAATGTCACCTTTGATTCCCCTATCTTCCACATTTaGATGCATTGCCAACAAAACCTGTGCAAGCTCATA +
Preference number: 6 (lower is better)
Translates to: CNVTFDSPIFHI*MHCQQNLCKLI
Trigger: TATGAGCTTGCACAGGTTTTGTTGGCAATGCATGCAAATGTGGAAGATAGGGGAATCAAAGGTGACATTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
ENST00000639793.1
CDS CCA 72 bp TGGCGTTTTTGTTTGCTTCAGCAGCCTGTCTATCTTTaGCTTGTACTATTGACTCCATACAAAGATGACACT +
Preference number: 6 (lower is better)
Translates to: WRFCLLQQPVYL*LVLLTPYKDDT
Trigger: AGTGTCATCTTTGTATGGAGTCAATAGTACAAGCCAAAGATAGACAGGCTGCTGAAGCAAACAAAAACGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000514252.1
ENST00000558247.5
ENST00000561029.1
CDS CAA 72 bp TTGCTTCAGCAGCCTGTCTATCTTTGGCTTGTACTATaGACTCCATACAAAGATGACACTTCTTCAGCATCT +
Preference number: 6 (lower is better)
Translates to: LLQQPVYLWLVL*TPYKDDTSSAS
Trigger: AGATGCTGAAGAAGTGTCATCTTTGTATGGAGTCAATAGTACAAGCCAAAGATAGACAGGCTGCTGAAGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000514252.1
ENST00000558247.5
ENST00000561029.1
CDS CAA 72 bp AGTCTAACTCCTCTAACAAAATGCTGGCGTTTTTGTTaGCTTCAGCAGCCTGTCTATCTTTGGCTTGTACTA +
Preference number: 6 (lower is better)
Translates to: SLTPLTKCWRFC*LQQPVYLWLVL
Trigger: TAGTACAAGCCAAAGATAGACAGGCTGCTGAAGCAAACAAAAACGCCAGCATTTTGTTAGAGGAGTTAGACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000514252.1
ENST00000558247.5
ENST00000561029.1
CDS CAA 72 bp CTCCTGAAATGTTTGAAGCAAAGTTTCCCAAATGTGTaGAAGAAGGTGTTACAGAACCATATGGCGAGTCCA +
Preference number: 6 (lower is better)
Translates to: LLKCLKQSFPNV*KKVLQNHMASP
Trigger: TGGACTCGCCATATGGTTCTGTAACACCTTCTTCAACACATTTGGGAAACTTTGCTTCAAACATTTCAGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS TCA 72 bp TTGCCTGTTGAAGACTGTGCATTAACATCTGCTTTATaGGCTAGCAGCAACTTCACAATTTTGACATGTCCT +
Preference number: 6 (lower is better)
Translates to: LPVEDCALTSAL*ASSNFTILTCP
Trigger: AGGACATGTCAAAATTGTGAAGTTGCTGCTAGCTCATAAAGCAGATGTTAATGCACAGTCTTCAACAGGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
ENST00000639793.1
CDS TCA 72 bp GGTGGTCTAAAACCTGGAGCTTTGGAAGTATCAGACTaGTGTAAAGGATCTGAATTTGGCAAATATGAGGAT +
Preference number: 6 (lower is better)
Translates to: GGLKPGALEVSD*CKGSEFGKYED
Trigger: ATCCTCATATTTGCCAAATTCAGATCCTTTACATCAGTCTGATACTTCCAAAGCTCCAGGTTTTAGACCACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330838.10
ENST00000358602.9
ENST00000509867.6
ENST00000558247.5
CDS TCA 72 bp GAAGCTGTTTCCAGCATTGGATTTTCCAAATCATCCTaGTCCAAAATGAAAGACTCCACCTCAAGAATGTCT +
Preference number: 6 (lower is better)
Translates to: EAVSSIGFSKSS*SKMKDSTSRMS
Trigger: AGACATTCTTGAGGTGGAGTCTTTCATTTTGGATCAGGATGATTTGGAAAATCCAATGCTGGAAACAGCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000509867.6
ENST00000559367.1
CDS TCA 72 bp AAATATTACACCATGTTATATAAAGACTTGAGTATCTaGATTTTGGTATCCGTGAGGGTCCTGGAAACCATC +
Preference number: 6 (lower is better)
Translates to: KYYTMLYKDLSI*ILVSVRVLETI
Trigger: GATGGTTTCCAGGACCCTCACGGATACCAAAATTCAGATACTCAAGTCTTTATATAACATGGTGTAATATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560507.1