RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ANKH (Homo sapiens)

Ensembl gene IDs: ENSG00000154122

Ensembl transcript IDs: ENST00000284268.8, ENST00000502585.1, ENST00000503389.1, ENST00000503939.5, ENST00000505140.1, ENST00000513115.1, ENST00000515517.1, ENST00000646501.1, ENST00000647541.1

Found 596 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCCATCTGTCAGCCTGCTGTGGTCACAGGTCTCCGTTCCTCAGTGTaGACGGGGACTCCGGGCTGCAGCGTGCCACCCGCCTCCTGCATG +
Preference number: 1 (lower is better)
Translates to: SICQPAVVTGLRSSV*TGTPGCSVPPASCM
Trigger: CATGCAGGAGGCGGGTGGCACGCTGCAGCCCGGAGTCCCCGTTCACACTGAGGAACGGAGACCTGTGACCACAGCAGGCTGACAGATGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR CCA 90 bp CGCTCGTCACACGCTCTGGCCACTTGGGACACCTGCCCATCAGGGTaGCATGTCACTGCCTCCCCATCACCAAATCCTCTCCCCGGCCTT +
Preference number: 1 (lower is better)
Translates to: RSSHALATWDTCPSG*HVTASPSPNPLPGL
Trigger: AAGGCCGGGGAGAGGATTTGGTGATGGGGAGGCAGTGACATGCCACCCTGATGGGCAGGTGTCCCAAGTGGCCAGAGCGTGTGACGAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505140.1
3UTR TCA 90 bp ATTCCAACCAGGAGAGAGATCCAGAGGGCTGGGAGTGAGCACTCCTaGGCTGGCCCCGCTGCGACGCATCCTGGCGTCTGGAGAACTCAG +
Preference number: 1 (lower is better)
Translates to: IPTRREIQRAGSEHS*AGPAATHPGVWRTQ
Trigger: CTGAGTTCTCCAGACGCCAGGATGCGTCGCAGCGGGGCCAGCTCAGGAGTGCTCACTCCCAGCCCTCTGGATCTCTCTCCTGGTTGGAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR GCA 90 bp GTCTGTGGCCTGCTGTGCAGGGTGACCGAGGCGCGATGGCACAGCTaGAGTCCTTTGGTTCCAAGAGGAGATTGTCCAGGGGAGGAGGAC +
Preference number: 1 (lower is better)
Translates to: VCGLLCRVTEARWHS*SPLVPRGDCPGEED
Trigger: GTCCTCCTCCCCTGGACAATCTCCTCTTGGAACCAAAGGACTGCAGCTGTGCCATCGCGCCTCGGTCACCCTGCACAGCAGGCCACAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR CCA 90 bp GACAGGAGAGTCTGTGGCCTGCTGTGCAGGGTGACCGAGGCGCGATaGCACAGCTGCAGTCCTTTGGTTCCAAGAGGAGATTGTCCAGGG +
Preference number: 1 (lower is better)
Translates to: DRRVCGLLCRVTEAR*HSCSPLVPRGDCPG
Trigger: CCCTGGACAATCTCCTCTTGGAACCAAAGGACTGCAGCTGTGCCATCGCGCCTCGGTCACCCTGCACAGCAGGCCACAGACTCTCCTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR CCA 90 bp TCCGGGCTGCAGCGTGCCACCCGCCTCCTGCATGTGTGGAGTAGATaGTTTCGAACTCCGTGGCGGAAGGGAAATTTAAGAGGCCACCGG +
Preference number: 1 (lower is better)
Translates to: SGLQRATRLLHVWSR*FRTPWRKGNLRGHR
Trigger: CCGGTGGCCTCTTAAATTTCCCTTCCGCCACGGAGTTCGAAACCATCTACTCCACACATGCAGGAGGCGGGTGGCACGCTGCAGCCCGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR GCA 90 bp ATACAGGAGTGCCGCTCGTCACACGCTCTGGCCACTTGGGACACCTaGCCATCAGGGTGGCATGTCACTGCCTCCCCATCACCAAATCCT +
Preference number: 1 (lower is better)
Translates to: IQECRSSHALATWDT*PSGWHVTASPSPNP
Trigger: AGGATTTGGTGATGGGGAGGCAGTGACATGCCACCCTGATGGGCAGGTGTCCCAAGTGGCCAGAGCGTGTGACGAGCGGCACTCCTGTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505140.1
3UTR CCA 90 bp AGTACCACAATACAGGAGTGCCGCTCGTCACACGCTCTGGCCACTTaGGACACCTGCCCATCAGGGTGGCATGTCACTGCCTCCCCATCA +
Preference number: 1 (lower is better)
Translates to: STTIQECRSSHALAT*DTCPSGWHVTASPS
Trigger: TGATGGGGAGGCAGTGACATGCCACCCTGATGGGCAGGTGTCCCAAGTGGCCAGAGCGTGTGACGAGCGGCACTCCTGTATTGTGGTACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505140.1
3UTR TCA 90 bp TGTAATGATTATTCCAACCAGGAGAGAGATCCAGAGGGCTGGGAGTaGGCACTCCTGAGCTGGCCCCGCTGCGACGCATCCTGGCGTCTG +
Preference number: 1 (lower is better)
Translates to: CNDYSNQERDPEGWE*ALLSWPRCDASWRL
Trigger: CAGACGCCAGGATGCGTCGCAGCGGGGCCAGCTCAGGAGTGCTCACTCCCAGCCCTCTGGATCTCTCTCCTGGTTGGAATAATCATTACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR GCA 90 bp TTCTTAAGAGCGATGAAGGGGGACAGGAGAGTCTGTGGCCTGCTGTaGAGGGTGACCGAGGCGCGATGGCACAGCTGCAGTCCTTTGGTT +
Preference number: 1 (lower is better)
Translates to: FLRAMKGDRRVCGLL*RVTEARWHSCSPLV
Trigger: AACCAAAGGACTGCAGCTGTGCCATCGCGCCTCGGTCACCCTGCACAGCAGGCCACAGACTCTCCTGTCCCCCTTCATCGCTCTTAAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR CCA 90 bp AACCTGTTGATTCTTAAGAGCGATGAAGGGGGACAGGAGAGTCTGTaGCCTGCTGTGCAGGGTGACCGAGGCGCGATGGCACAGCTGCAG +
Preference number: 1 (lower is better)
Translates to: NLLILKSDEGGQESL*PAVQGDRGAMAQLQ
Trigger: CTGCAGCTGTGCCATCGCGCCTCGGTCACCCTGCACAGCAGGCCACAGACTCTCCTGTCCCCCTTCATCGCTCTTAAGAATCAACAGGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR CCA 90 bp AACGGGGACTCCGGGCTGCAGCGTGCCACCCGCCTCCTGCATGTGTaGAGTAGATGGTTTCGAACTCCGTGGCGGAAGGGAAATTTAAGA +
Preference number: 1 (lower is better)
Translates to: NGDSGLQRATRLLHV*SRWFRTPWRKGNLR
Trigger: TCTTAAATTTCCCTTCCGCCACGGAGTTCGAAACCATCTACTCCACACATGCAGGAGGCGGGTGGCACGCTGCAGCCCGGAGTCCCCGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR CCA 90 bp GCCACCCGCCTCCTGCATGTGTGGAGTAGATGGTTTCGAACTCCGTaGCGGAAGGGAAATTTAAGAGGCCACCGGGGCTCCATCTCTTTG +
Preference number: 1 (lower is better)
Translates to: ATRLLHVWSRWFRTP*RKGNLRGHRGSISL
Trigger: CAAAGAGATGGAGCCCCGGTGGCCTCTTAAATTTCCCTTCCGCCACGGAGTTCGAAACCATCTACTCCACACATGCAGGAGGCGGGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR CCA 90 bp AGAAAGACAGTACCACAATACAGGAGTGCCGCTCGTCACACGCTCTaGCCACTTGGGACACCTGCCCATCAGGGTGGCATGTCACTGCCT +
Preference number: 1 (lower is better)
Translates to: RKTVPQYRSAARHTL*PLGTPAHQGGMSLP
Trigger: AGGCAGTGACATGCCACCCTGATGGGCAGGTGTCCCAAGTGGCCAGAGCGTGTGACGAGCGGCACTCCTGTATTGTGGTACTGTCTTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505140.1
3UTR CCA 90 bp ACCAAACCTTTCTACGGGAGATTCTGTCCATCTGTCAGCCTGCTGTaGTCACAGGTCTCCGTTCCTCAGTGTGAACGGGGACTCCGGGCT +
Preference number: 1 (lower is better)
Translates to: TKPFYGRFCPSVSLL*SQVSVPQCERGLRA
Trigger: AGCCCGGAGTCCCCGTTCACACTGAGGAACGGAGACCTGTGACCACAGCAGGCTGACAGATGGACAGAATCTCCCGTAGAAAGGTTTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR GCA 90 bp GGGGTAAGGGACCTGCTGCACGGTGACATGACCATCGCTGTGGGGTaGTGGGTGATTGGTGTTGATGTGTACCCTGTACTCCTTTGTTAC +
Preference number: 1 (lower is better)
Translates to: GVRDLLHGDMTIAVG*WVIGVDVYPVLLCY
Trigger: GTAACAAAGGAGTACAGGGTACACATCAACACCAATCACCCAGCACCCCACAGCGATGGTCATGTCACCGTGCAGCAGGTCCCTTACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR CCA 90 bp GTAAGGGACCTGCTGCACGGTGACATGACCATCGCTGTGGGGTGCTaGGTGATTGGTGTTGATGTGTACCCTGTACTCCTTTGTTACGCA +
Preference number: 1 (lower is better)
Translates to: VRDLLHGDMTIAVGC*VIGVDVYPVLLCYA
Trigger: TGCGTAACAAAGGAGTACAGGGTACACATCAACACCAATCACCCAGCACCCCACAGCGATGGTCATGTCACCGTGCAGCAGGTCCCTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR GCA 90 bp TTCAAACCAAACCTTTCTACGGGAGATTCTGTCCATCTGTCAGCCTaGTGTGGTCACAGGTCTCCGTTCCTCAGTGTGAACGGGGACTCC +
Preference number: 1 (lower is better)
Translates to: FKPNLSTGDSVHLSA*CGHRSPFLSVNGDS
Trigger: GGAGTCCCCGTTCACACTGAGGAACGGAGACCTGTGACCACAGCAGGCTGACAGATGGACAGAATCTCCCGTAGAAAGGTTTGGTTTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR GCA 90 bp CCACGTGGGCACACCCCATCAGCACTGGGTACCCAGGAATGTGAATaGAACCCTGGCATGTTCACAGCTAACATTATGCCCTTGCATTCT +
Preference number: 1 (lower is better)
Translates to: PRGHTPSALGTQECE*NPGMFTANIMPLHS
Trigger: AGAATGCAAGGGCATAATGTTAGCTGTGAACATGCCAGGGTTGCATTCACATTCCTGGGTACCCAGTGCTGATGGGGTGTGCCCACGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR GCA 90 bp TTGAACTTAGCTTTCAGTAGCTGTTTCATTCAAACCGTGGGTCCCTaGATGTTCATGGCCCCACACTTCAGGGAACCAGCATCTACCCGG +
Preference number: 1 (lower is better)
Translates to: LNLAFSSCFIQTVGP*MFMAPHFREPASTR
Trigger: CCGGGTAGATGCTGGTTCCCTGAAGTGTGGGGCCATGAACATGCAGGGACCCACGGTTTGAATGAAACAGCTACTGAAAGCTAAGTTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR GCA 90 bp CAACCAAAATATCTCATTAAATCCAAGGAGCAGCGTATTTGCCACTaGAAGGCTTGTGGATGTGGCAGCCCTGGGGTAAGGGACCTGCTG +
Preference number: 1 (lower is better)
Translates to: QPKYLIKSKEQRICH*KACGCGSPGVRDLL
Trigger: CAGCAGGTCCCTTACCCCAGGGCTGCCACATCCACAAGCCTTGCAGTGGCAAATACGCTGCTCCTTGGATTTAATGAGATATTTTGGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR GCA 90 bp CTTGACTTAAAAGGAAAGAAGAAAGACAGTACCACAATACAGGAGTaGCGCTCGTCACACGCTCTGGCCACTTGGGACACCTGCCCATCA +
Preference number: 1 (lower is better)
Translates to: LDLKGKKKDSTTIQE*RSSHALATWDTCPS
Trigger: TGATGGGCAGGTGTCCCAAGTGGCCAGAGCGTGTGACGAGCGGCACTCCTGTATTGTGGTACTGTCTTTCTTCTTTCCTTTTAAGTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505140.1
3UTR GCA 90 bp AATCCTACCGTGACTTTCCAAGCGCAAGCCTCGTCTAGTTCTTTTTaGTCAGTTGTTGTCTCACTGACGCCCTTTGCCACTGAGATCCCT +
Preference number: 1 (lower is better)
Translates to: NPTVTFQAQASSSSF*SVVVSLTPFATEIP
Trigger: AGGGATCTCAGTGGCAAAGGGCGTCAGTGAGACAACAACTGAGCAAAAAGAACTAGACGAGGCTTGCGCTTGGAAAGTCACGGTAGGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR CCA 90 bp CTTTCAGTAGCTGTTTCATTCAAACCGTGGGTCCCTGCATGTTCATaGCCCCACACTTCAGGGAACCAGCATCTACCCGGTTGTAATGTT +
Preference number: 1 (lower is better)
Translates to: LSVAVSFKPWVPACS*PHTSGNQHLPGCNV
Trigger: AACATTACAACCGGGTAGATGCTGGTTCCCTGAAGTGTGGGGCCATGAACATGCAGGGACCCACGGTTTGAATGAAACAGCTACTGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR TCA 90 bp CATGTGACTGGGAAGCAAATCAAAGGAAGCCGAGTTTTAACCTGTTaGTTCTTAAGAGCGATGAAGGGGGACAGGAGAGTCTGTGGCCTG +
Preference number: 1 (lower is better)
Translates to: HVTGKQIKGSRVLTC*FLRAMKGDRRVCGL
Trigger: CAGGCCACAGACTCTCCTGTCCCCCTTCATCGCTCTTAAGAATCAACAGGTTAAAACTCGGCTTCCTTTGATTTGCTTCCCAGTCACATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR GCA 90 bp GGAGAACGCAGAGTGAAATGCTATCATTCAACCATGTCAGTTTGCTaGCCCCGGGGCATTTCAAACCAAACCTTTCTACGGGAGATTCTG +
Preference number: 1 (lower is better)
Translates to: GERRVKCYHSTMSVC*PRGISNQTFLREIL
Trigger: CAGAATCTCCCGTAGAAAGGTTTGGTTTGAAATGCCCCGGGGGCAGCAAACTGACATGGTTGAATGATAGCATTTCACTCTGCGTTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR TCA 90 bp GAGAAAGGTCACCCTCCCTGGTTTGATCTCTCATGTCTAGCTGGATaGTGGGACTCGATTAGAAGAAACGCAGGAGAATATGCCAGTTCT +
Preference number: 1 (lower is better)
Translates to: EKGHPPWFDLSCLAG*WDSIRRNAGEYASS
Trigger: AGAACTGGCATATTCTCCTGCGTTTCTTCTAATCGAGTCCCATCATCCAGCTAGACATGAGAGATCAAACCAGGGAGGGTGACCTTTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR GCA 90 bp CTAGGAGAACGCAGAGTGAAATGCTATCATTCAACCATGTCAGTTTaGTGCCCCCGGGGCATTTCAAACCAAACCTTTCTACGGGAGATT +
Preference number: 1 (lower is better)
Translates to: LGERRVKCYHSTMSV*CPRGISNQTFLREI
Trigger: AATCTCCCGTAGAAAGGTTTGGTTTGAAATGCCCCGGGGGCAGCAAACTGACATGGTTGAATGATAGCATTTCACTCTGCGTTCTCCTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR GCA 90 bp TTTGCCACTGAGATCCCTGTAAGTCACTACAGAACAAATGGCAACTaGACATTTAGGATGACGTCCCTTGTGCTACTCAAACAGGCCACC +
Preference number: 1 (lower is better)
Translates to: FATEIPVSHYRTNGN*TFRMTSLVLLKQAT
Trigger: GGTGGCCTGTTTGAGTAGCACAAGGGACGTCATCCTAAATGTGCAGTTGCCATTTGTTCTGTAGTGACTTACAGGGATCTCAGTGGCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR GCA 90 bp ATTAAGCAACCAAAATATCTCATTAAATCCAAGGAGCAGCGTATTTaGCACTGCAAGGCTTGTGGATGTGGCAGCCCTGGGGTAAGGGAC +
Preference number: 1 (lower is better)
Translates to: IKQPKYLIKSKEQRI*HCKACGCGSPGVRD
Trigger: GTCCCTTACCCCAGGGCTGCCACATCCACAAGCCTTGCAGTGGCAAATACGCTGCTCCTTGGATTTAATGAGATATTTTGGTTGCTTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR CCA 90 bp TTTAAGAGGCCACCGGGGCTCCATCTCTTTGTACGGCCATGTGACTaGGAAGCAAATCAAAGGAAGCCGAGTTTTAACCTGTTGATTCTT +
Preference number: 1 (lower is better)
Translates to: FKRPPGLHLFVRPCD*EANQRKPSFNLLIL
Trigger: AAGAATCAACAGGTTAAAACTCGGCTTCCTTTGATTTGCTTCCCAGTCACATGGCCGTACAAAGAGATGGAGCCCCGGTGGCCTCTTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR TCA 90 bp AGCGTGAGTGATATGGAAGCCTCCAGCTTGAATACACTTCTTAAATaGATGAGTGTCGGCATGGAACAGAATCACGTGTGTGGCTCTTGT +
Preference number: 1 (lower is better)
Translates to: SVSDMEASSLNTLLK*MSVGMEQNHVCGSC
Trigger: ACAAGAGCCACACACGTGATTCTGTTCCATGCCGACACTCATTCATTTAAGAAGTGTATTCAAGCTGGAGGCTTCCATATCACTCACGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR CCA 90 bp TCAACAGTTTATACCCACAGTTTTGATGTGAAACTGACAAACCTATaGGCTGACAGCCACAGCCCATGTAGAGGAATGACTCTAAGCACA +
Preference number: 1 (lower is better)
Translates to: STVYTHSFDVKLTNL*ADSHSPCRGMTLST
Trigger: TGTGCTTAGAGTCATTCCTCTACATGGGCTGTGGCTGTCAGCCCATAGGTTTGTCAGTTTCACATCAAAACTGTGGGTATAAACTGTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR TCA 90 bp TTTGTACTCCCGTGCTACCTCTCCATCTTAGGATTTGTAAATCGCTaGCAAATAAGCCATCATTCACTCCCAGCAAGGTGTAATACACCT +
Preference number: 1 (lower is better)
Translates to: FVLPCYLSILGFVNR*QISHHSLPARCNTP
Trigger: AGGTGTATTACACCTTGCTGGGAGTGAATGATGGCTTATTTGTCAGCGATTTACAAATCCTAAGATGGAGAGGTAGCACGGGAGTACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505140.1
3UTR CCA 90 bp AGACCGGCTTATCAGGACACATTCGGGATACCCCTAATCCTTACCTaGACTACGAAACAAATGTTTAAAAATGGAAGTACCTGGGAAATC +
Preference number: 1 (lower is better)
Translates to: RPAYQDTFGIPLILT*TTKQMFKNGSTWEI
Trigger: GATTTCCCAGGTACTTCCATTTTTAAACATTTGTTTCGTAGTCCAGGTAAGGATTAGGGGTATCCCGAATGTGTCCTGATAAGCCGGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505140.1
3UTR GCA 90 bp CAGGCCACCAAAGGAGGAGCTCTAGAAAACCCTTACTATTTCCTATaGTTTGAGCTGCCCAAACCTATTATTTCTCAGCATCTAAATGAA +
Preference number: 1 (lower is better)
Translates to: QATKGGALENPYYFL*FELPKPIISQHLNE
Trigger: TTCATTTAGATGCTGAGAAATAATAGGTTTGGGCAGCTCAAAGCATAGGAAATAGTAAGGGTTTTCTAGAGCTCCTCCTTTGGTGGCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR TCA 90 bp CTCAGAAACTCTAACCAAATATTATGGCCCACTGATCTTGATCACTaGAGGAATCTCTGGAGTTGTATTTCCTCATCTCATAATGAGGAG +
Preference number: 1 (lower is better)
Translates to: LRNSNQILWPTDLDH*RNLWSCISSSHNEE
Trigger: CTCCTCATTATGAGATGAGGAAATACAACTCCAGAGATTCCTTCAGTGATCAAGATCAGTGGGCCATAATATTTGGTTAGAGTTTCTGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR TCA 90 bp ATTGCCTCTAAATCTTATAGTGAGAATTTCCATGAGGTTGTACAGTaGGTGGTACAACCATTTTTAGCTGGTCTGTCCCCTTCTTTAACC +
Preference number: 1 (lower is better)
Translates to: IASKSYSENFHEVVQ*VVQPFLAGLSPSLT
Trigger: GGTTAAAGAAGGGGACAGACCAGCTAAAAATGGTTGTACCACTCACTGTACAACCTCATGGAAATTCTCACTATAAGATTTAGAGGCAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR TCA 90 bp GGGAAGTACCGTAGTACATTCTCAATTACCTGTACCGCAGAGTTATaGCTAAGGATAGCAGAACCAGGTAATATATCTACTTCAAAAGTT +
Preference number: 1 (lower is better)
Translates to: GKYRSTFSITCTAEL*LRIAEPGNISTSKV
Trigger: AACTTTTGAAGTAGATATATTACCTGGTTCTGCTATCCTTAGTCATAACTCTGCGGTACAGGTAATTGAGAATGTACTACGGTACTTCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR CCA 90 bp CCACTTGGGACACCTGCCCATCAGGGTGGCATGTCACTGCCTCCCCATCACCAAGCTGCATCCCGCTGGTaGCCCTGCCAAAACGGTCCC +
Preference number: 2 (lower is better)
Translates to: PLGTPAHQGGMSLPPHHQAASRW*PCQNGP
Trigger: GGGACCGTTTTGGCAGGGCCACCAGCGGGATGCAGC...TTGGTGATGGGGAGGCAGTGACATGCCACCCTGATGGGCAGGTGTCCCAAGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505140.1
3UTR CAA 90 bp CAGTACCACAATACAGGAGTGCCGCTCGTCACACGCTCTGGCCACTaGGGACACCTGCCCATCAGGGTGGCATGTCACTGCCTCCCCATC +
Preference number: 2 (lower is better)
Translates to: QYHNTGVPLVTRSGH*GHLPIRVACHCLPI
Trigger: GATGGGGAGGCAGTGACATGCCACCCTGATGGGCAGGTGTCCCAAGTGGCCAGAGCGTGTGACGAGCGGCACTCCTGTATTGTGGTACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505140.1
3UTR CAA 90 bp CGAGGCGCGATGGCACAGCTGCAGTCCTTTGGTTCCAAGAGGAGATaGTCCAGGGGAGGAGGACACAACGTCAACCGTGAGGCAGCTGTG +
Preference number: 2 (lower is better)
Translates to: RGAMAQLQSFGSKRR*SRGGGHNVNREAAV
Trigger: CACAGCTGCCTCACGGTTGACGTTGTGTCCTCCTCCCCTGGACAATCTCCTCTTGGAACCAAAGGACTGCAGCTGTGCCATCGCGCCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR CAA 90 bp CTGCTGTGCAGGGTGACCGAGGCGCGATGGCACAGCTGCAGTCCTTaGGTTCCAAGAGGAGATTGTCCAGGGGAGGAGGACACAACGTCA +
Preference number: 2 (lower is better)
Translates to: LLCRVTEARWHSCSP*VPRGDCPGEEDTTS
Trigger: TGACGTTGTGTCCTCCTCCCCTGGACAATCTCCTCTTGGAACCAAAGGACTGCAGCTGTGCCATCGCGCCTCGGTCACCCTGCACAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR GCA 90 bp GTCGGCATGGAACAGAATCACGTGTGTGGCTCTTGTCCACTTTCCCGAAGCCCTGTCTGTGGCCTGCTGTaGAGGGTGACCGAGGCGCGA +
Preference number: 2 (lower is better)
Translates to: VGMEQNHVCGSCPLSRSPVCGLL*RVTEAR
Trigger: TCGCGCCTCGGTCACCCTGCACAGCAGGCCACAGAC...AGGGCTTCGGGAAAGTGGACAAGAGCCACACACGTGATTCTGTTCCATGCCGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR CCA 90 bp GTCGGCATGGAACAGAATCACGTGTGTGGCTCTTGTCCACTTTCCCGAAGCCCTCAGGCTGGAGTGCGATaGCGCGATCTCGGCTCACTA +
Preference number: 2 (lower is better)
Translates to: VGMEQNHVCGSCPLSRSPQAGVR*RDLGSL
Trigger: TAGTGAGCCGAGATCGCGCCATCGCACTCCAGCCTG...AGGGCTTCGGGAAAGTGGACAAGAGCCACACACGTGATTCTGTTCCATGCCGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR GCA 90 bp ATCGCTGTGGGGTGCTGGGTGATTGGTGTTGATGTGTACCCTGTACTCCTTTGTTCACCCAGGCTGGAGTaGGATGGCGCGATCTCGGCT +
Preference number: 2 (lower is better)
Translates to: IAVGCWVIGVDVYPVLLCSPRLE*DGAISA
Trigger: AGCCGAGATCGCGCCATCGCACTCCAGCCTGGGTGA...ACAAAGGAGTACAGGGTACACATCAACACCAATCACCCAGCACCCCACAGCGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR GCA 90 bp GTCGGCATGGAACAGAATCACGTGTGTGGCTCTTGTCCACTTTCCCGAAGCCCTCAAACCGTGGGTCCCTaGATGTTCATGGCCCCACAC +
Preference number: 2 (lower is better)
Translates to: VGMEQNHVCGSCPLSRSPQTVGP*MFMAPH
Trigger: GTGTGGGGCCATGAACATGCAGGGACCCACGGTTTG...AGGGCTTCGGGAAAGTGGACAAGAGCCACACACGTGATTCTGTTCCATGCCGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR GCA 90 bp AGACAGTACCACAATACAGGAGTGCCGCTCGTCACACGCTCTGGCCACTTGGGAAGGGTGGCATGTCACTaGCTCCCCATCACCAAATCC +
Preference number: 2 (lower is better)
Translates to: RQYHNTGVPLVTRSGHLGRVACH*LPITKS
Trigger: GGATTTGGTGATGGGGAGGCAGTGACATGCCACCCT...TCCCAAGTGGCCAGAGCGTGTGACGAGCGGCACTCCTGTATTGTGGTACTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505140.1
3UTR-3UTR TCA 90 bp CTATCATTCAACCATGTCAGTTTGCTGCCCCCGGGGCATTTCAAACCAAACCTTCTCCGTTCCTCAGTGTaGACGGGGACTCCGGGCTGC +
Preference number: 2 (lower is better)
Translates to: LSFNHVSLLPPGHFKPNLLRSSV*TGTPGC
Trigger: GCAGCCCGGAGTCCCCGTTCACACTGAGGAACGGAG...AAGGTTTGGTTTGAAATGCCCCGGGGGCAGCAAACTGACATGGTTGAATGATAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR GCA 90 bp CAAGTCCTGCCAAATCAGCTCCATTGTGGTGGCCTGAGTGTGGCATTGCTTCCTGTCCATCTGTCAGCCTaGTGTGGTCACAGGTCTCCG +
Preference number: 2 (lower is better)
Translates to: QVLPNQLHCGGLSVALLPVHLSA*CGHRSP
Trigger: CGGAGACCTGTGACCACAGCAGGCTGACAGATGGAC...AGGAAGCAATGCCACACTCAGGCCACCACAATGGAGCTGATTTGGCAGGACTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR GCA 90 bp CCACTTGGGACACCTGCCCATCAGGGTGGCATGTCACTGCCTCCCCATCACCAACATCGCTGGAGAGCTTaGAGCGCTAGATTTTCAATG +
Preference number: 2 (lower is better)
Translates to: PLGTPAHQGGMSLPPHHQHRWRA*SARFSM
Trigger: CATTGAAAATCTAGCGCTGCAAGCTCTCCAGCGATG...TTGGTGATGGGGAGGCAGTGACATGCCACCCTGATGGGCAGGTGTCCCAAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505140.1
3UTR-3UTR CCA 90 bp ATCGCTGTGGGGTGCTGGGTGATTGGTGTTGATGTGTACCCTGTACTCCTTTGTGTGACCGAGGCGCGATaGCACAGCTGCAGTCCTTTG +
Preference number: 2 (lower is better)
Translates to: IAVGCWVIGVDVYPVLLCVTEAR*HSCSPL
Trigger: CAAAGGACTGCAGCTGTGCCATCGCGCCTCGGTCAC...ACAAAGGAGTACAGGGTACACATCAACACCAATCACCCAGCACCCCACAGCGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR CCA 90 bp GCTGTGGGGTGCTGGGTGATTGGTGTTGATGTGTACCCTGTACTCCTTTGTTACGGACATGTCCCCACGTaGGCACACCCCATCAGCACT +
Preference number: 2 (lower is better)
Translates to: AVGCWVIGVDVYPVLLCYGHVPT*AHPIST
Trigger: AGTGCTGATGGGGTGTGCCCACGTGGGGACATGTCC...GTAACAAAGGAGTACAGGGTACACATCAACACCAATCACCCAGCACCCCACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR CCA 90 bp CAAGTCCTGCCAAATCAGCTCCATTGTGGTGGCCTGAGTGTGGCATTGCTTCCTTCTTGTCACCCAGGCTaGAGTGCGATGGCGCGATCT +
Preference number: 2 (lower is better)
Translates to: QVLPNQLHCGGLSVALLPSCHPG*SAMARS
Trigger: AGATCGCGCCATCGCACTCCAGCCTGGGTGACAAGA...AGGAAGCAATGCCACACTCAGGCCACCACAATGGAGCTGATTTGGCAGGACTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR CAA 90 bp CCGTGGCGGAAGGGAAATTTAAGAGGCCACCGGGGCTCCATCTCTTaGTACGGCCATGTGACTGGGAAGCAAATCAAAGGAAGCCGAGTT +
Preference number: 2 (lower is better)
Translates to: PWRKGNLRGHRGSIS*YGHVTGKQIKGSRV
Trigger: AACTCGGCTTCCTTTGATTTGCTTCCCAGTCACATGGCCGTACAAAGAGATGGAGCCCCGGTGGCCTCTTAAATTTCCCTTCCGCCACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR TCA 90 bp CAAGTCCTGCCAAATCAGCTCCATTGTGGTGGCCTGAGTGTGGCATTGCTTCCTGGGAGAGGGAAGAGATaGTGCCGAAGTGTCATCCTG +
Preference number: 2 (lower is better)
Translates to: QVLPNQLHCGGLSVALLPGRGKR*CRSVIL
Trigger: CAGGATGACACTTCGGCATCATCTCTTCCCTCTCCC...AGGAAGCAATGCCACACTCAGGCCACCACAATGGAGCTGATTTGGCAGGACTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR GCA 90 bp AGACAGTACCACAATACAGGAGTGCCGCTCGTCACACGCTCTGGCCACTTGGGAAAAACGGTCCCCACATaGAAAGTGCAGGGTGCCAAT +
Preference number: 2 (lower is better)
Translates to: RQYHNTGVPLVTRSGHLGKTVPT*KVQGAN
Trigger: ATTGGCACCCTGCACTTTGCATGTGGGGACCGTTTT...TCCCAAGTGGCCAGAGCGTGTGACGAGCGGCACTCCTGTATTGTGGTACTGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505140.1
3UTR CAA 90 bp TGTGTGAGGGCGATGTCTACAGAATGCAGGCAGGAGCTGCTGGCTTaGAACCGGCTGAATGTGCAATGCAGACATCTCAACACTCCACGT +
Preference number: 2 (lower is better)
Translates to: CVRAMSTECRQELLA*NRLNVQCRHLNTPR
Trigger: ACGTGGAGTGTTGAGATGTCTGCATTGCACATTCAGCCGGTTCAAAGCCAGCAGCTCCTGCCTGCATTCTGTAGACATCGCCCTCACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR TCA 90 bp GTCGGCATGGAACAGAATCACGTGTGTGGCTCTTGTCCACTTTCCCGAAGCCCTTTAGGATGCTCCATGTaGCTCGCTCTAATGCGACCT +
Preference number: 2 (lower is better)
Translates to: VGMEQNHVCGSCPLSRSPLGCSM*LALMRP
Trigger: AGGTCGCATTAGAGCGAGTCACATGGAGCATCCTAA...AGGGCTTCGGGAAAGTGGACAAGAGCCACACACGTGATTCTGTTCCATGCCGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR TCA 90 bp GCTGTGGGGTGCTGGGTGATTGGTGTTGATGTGTACCCTGTACTCCTTTGTTACTCCATTGTGGTGGCCTaGGTGTGGCATTGCTTCCTG +
Preference number: 2 (lower is better)
Translates to: AVGCWVIGVDVYPVLLCYSIVVA*VWHCFL
Trigger: CAGGAAGCAATGCCACACTCAGGCCACCACAATGGA...GTAACAAAGGAGTACAGGGTACACATCAACACCAATCACCCAGCACCCCACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR GCA 90 bp GTCGGCATGGAACAGAATCACGTGTGTGGCTCTTGTCCACTTTCCCGAAGCCCTTCAAGCAAATTCTCCTaGCTCAGCCTCCTGAGTAGC +
Preference number: 2 (lower is better)
Translates to: VGMEQNHVCGSCPLSRSPSSKFS*LSLLSS
Trigger: GCTACTCAGGAGGCTGAGGCAGGAGAATTTGCTTGA...AGGGCTTCGGGAAAGTGGACAAGAGCCACACACGTGATTCTGTTCCATGCCGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR GCA 90 bp ATCATCTCAAAAGCACGTGAACCTGAGGCTGCATTGGCCTTTGTACTCCCGTGCTCCCCACATGCAAAGTaGAGGGTGCCAATGCCCCAT +
Preference number: 2 (lower is better)
Translates to: IISKAREPEAALAFVLPCSPHAK*RVPMPH
Trigger: ATGGGGCATTGGCACCCTGCACTTTGCATGTGGGGA...GCACGGGAGTACAAAGGCCAATGCAGCCTCAGGTTCACGTGCTTTTGAGATGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000505140.1
3UTR-3UTR CCA 90 bp GCTGTGGGGTGCTGGGTGATTGGTGTTGATGTGTACCCTGTACTCCTTTGTTACGTCCCTGCATGTTCATaGCCCCACACTTCAGGGAAC +
Preference number: 2 (lower is better)
Translates to: AVGCWVIGVDVYPVLLCYVPACS*PHTSGN
Trigger: GTTCCCTGAAGTGTGGGGCCATGAACATGCAGGGAC...GTAACAAAGGAGTACAGGGTACACATCAACACCAATCACCCAGCACCCCACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR CCA 90 bp TGTCCACTTTCCCGAAGCCCTTTGATTAACTCCTTGGCCCTACTAGCTTTAGACTGGATGTGGCAGCCCTaGGGTAAGGGACCTGCTGCA +
Preference number: 2 (lower is better)
Translates to: CPLSRSPLINSLALLALDWMWQP*GKGPAA
Trigger: TGCAGCAGGTCCCTTACCCCAGGGCTGCCACATCCA...GTCTAAAGCTAGTAGGGCCAAGGAGTTAATCAAAGGGCTTCGGGAAAGTGGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR TCA 90 bp CAAACGGGAGAGTTTCCTGCCAATGTGCAAATCCGTCAATACTCCCTGAGCCATAAGTGTCATCCTGACTaGCTGTCCCTGCAGTGCCCA +
Preference number: 2 (lower is better)
Translates to: QTGEFPANVQIRQYSLSHKCHPD*LSLQCP
Trigger: TGGGCACTGCAGGGACAGTCAGTCAGGATGACACTT...ATGGCTCAGGGAGTATTGACGGATTTGCACATTGGCAGGAAACTCTCCCGTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR TCA 90 bp CAAGTCCTGCCAAATCAGCTCCATTGTGGTGGCCTGAGTGTGGCATTGCTTCCTCGTGAGGCAGGGGTATaGAGTCAGTTGTTTCGTTTG +
Preference number: 2 (lower is better)
Translates to: QVLPNQLHCGGLSVALLPREAGV*SQLFRL
Trigger: CAAACGAAACAACTGACTTCATACCCCTGCCTCACG...AGGAAGCAATGCCACACTCAGGCCACCACAATGGAGCTGATTTGGCAGGACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR TCA 90 bp ATCGCTGTGGGGTGCTGGGTGATTGGTGTTGATGTGTACCCTGTACTCCTTTGTGGGTACCCAGGAATGTaGATGCAACCCTGGCATGTT +
Preference number: 2 (lower is better)
Translates to: IAVGCWVIGVDVYPVLLCGYPGM*MQPWHV
Trigger: AACATGCCAGGGTTGCATTCACATTCCTGGGTACCC...ACAAAGGAGTACAGGGTACACATCAACACCAATCACCCAGCACCCCACAGCGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR GCA 90 bp CAAACGGGAGAGTTTCCTGCCAATGTGCAAATCCGTCAATACTCCCTGAGCCATGCGCGATGGCACAGCTaGAGTCCTTTGGTTCCAAGA +
Preference number: 2 (lower is better)
Translates to: QTGEFPANVQIRQYSLSHARWHS*SPLVPR
Trigger: TCTTGGAACCAAAGGACTGCAGCTGTGCCATCGCGC...ATGGCTCAGGGAGTATTGACGGATTTGCACATTGGCAGGAAACTCTCCCGTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR GCA 90 bp GTCGGCATGGAACAGAATCACGTGTGTGGCTCTTGTCCACTTTCCCGAAGCCCTACCCAGGAATGTGAATaGAACCCTGGCATGTTCACA +
Preference number: 2 (lower is better)
Translates to: VGMEQNHVCGSCPLSRSPTQECE*NPGMFT
Trigger: TGTGAACATGCCAGGGTTGCATTCACATTCCTGGGT...AGGGCTTCGGGAAAGTGGACAAGAGCCACACACGTGATTCTGTTCCATGCCGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR GCA 90 bp GCTGTGGGGTGCTGGGTGATTGGTGTTGATGTGTACCCTGTACTCCTTTGTTACAAGTTACTCTCCCCCTaGCCCTTCCCTCCAGAAGAT +
Preference number: 2 (lower is better)
Translates to: AVGCWVIGVDVYPVLLCYKLLSP*PFPPED
Trigger: ATCTTCTGGAGGGAAGGGGCAGGGGGAGAGTAACTT...GTAACAAAGGAGTACAGGGTACACATCAACACCAATCACCCAGCACCCCACAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR GCA 90 bp ATCGCTGTGGGGTGCTGGGTGATTGGTGTTGATGTGTACCCTGTACTCCTTTGTGTACTAACCGGCACATaGTGTCCTGGGCACTGTTCT +
Preference number: 2 (lower is better)
Translates to: IAVGCWVIGVDVYPVLLCVLTGT*CPGHCS
Trigger: AGAACAGTGCCCAGGACAGCATGTGCCGGTTAGTAC...ACAAAGGAGTACAGGGTACACATCAACACCAATCACCCAGCACCCCACAGCGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR CCA 90 bp GTCGGCATGGAACAGAATCACGTGTGTGGCTCTTGTCCACTTTCCCGAAGCCCTGTACGGCCATGTGACTaGGAAGCAAATCAAAGGAAG +
Preference number: 2 (lower is better)
Translates to: VGMEQNHVCGSCPLSRSPVRPCD*EANQRK
Trigger: CTTCCTTTGATTTGCTTCCCAGTCACATGGCCGTAC...AGGGCTTCGGGAAAGTGGACAAGAGCCACACACGTGATTCTGTTCCATGCCGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR CCA 90 bp CAAGTCCTGCCAAATCAGCTCCATTGTGGTGGCCTGAGTGTGGCATTGCTTCCTGCAGGGTCTGGAATCTaGAGATGCGCTTTTGTGACA +
Preference number: 2 (lower is better)
Translates to: QVLPNQLHCGGLSVALLPAGSGI*RCAFVT
Trigger: TGTCACAAAAGCGCATCTCCAGATTCCAGACCCTGC...AGGAAGCAATGCCACACTCAGGCCACCACAATGGAGCTGATTTGGCAGGACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR CCA 90 bp GCTGTGGGGTGCTGGGTGATTGGTGTTGATGTGTACCCTGTACTCCTTTGTTACTCAGCTCCATTGTGGTaGCCTGAGTGTGGCATTGCT +
Preference number: 2 (lower is better)
Translates to: AVGCWVIGVDVYPVLLCYSAPLW*PECGIA
Trigger: AGCAATGCCACACTCAGGCCACCACAATGGAGCTGA...GTAACAAAGGAGTACAGGGTACACATCAACACCAATCACCCAGCACCCCACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR TCA 90 bp CTCATTAAATCCAAGGAGCAGCGTATTTGCCACTGCAAGGCTTGTGGATGTGGCACACAACGTCAACCGTaGGGCAGCTGTGTCTTTTGG +
Preference number: 2 (lower is better)
Translates to: LIKSKEQRICHCKACGCGTQRQP*GSCVFW
Trigger: CCAAAAGACACAGCTGCCTCACGGTTGACGTTGTGT...GCCACATCCACAAGCCTTGCAGTGGCAAATACGCTGCTCCTTGGATTTAATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR CCA 90 bp GTCGGCATGGAACAGAATCACGTGTGTGGCTCTTGTCCACTTTCCCGAAGCCCTGGGAACAAAATACGATaGGAGAGGGAAGAGATGATG +
Preference number: 2 (lower is better)
Translates to: VGMEQNHVCGSCPLSRSPGNKIR*EREEMM
Trigger: CATCATCTCTTCCCTCTCCCATCGTATTTTGTTCCC...AGGGCTTCGGGAAAGTGGACAAGAGCCACACACGTGATTCTGTTCCATGCCGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR TCA 90 bp GTCGGCATGGAACAGAATCACGTGTGTGGCTCTTGTCCACTTTCCCGAAGCCCTCCAACCCCAGAAGCATaGAAGTCACACATGTTAAAA +
Preference number: 2 (lower is better)
Translates to: VGMEQNHVCGSCPLSRSPPTPEA*KSHMLK
Trigger: TTTTAACATGTGTGACTTTCATGCTTCTGGGGTTGG...AGGGCTTCGGGAAAGTGGACAAGAGCCACACACGTGATTCTGTTCCATGCCGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR GCA 90 bp GTCGGCATGGAACAGAATCACGTGTGTGGCTCTTGTCCACTTTCCCGAAGCCCTAGAACAAATGGCAACTaGACATTTAGGATGACGTCC +
Preference number: 2 (lower is better)
Translates to: VGMEQNHVCGSCPLSRSPRTNGN*TFRMTS
Trigger: GGACGTCATCCTAAATGTGCAGTTGCCATTTGTTCT...AGGGCTTCGGGAAAGTGGACAAGAGCCACACACGTGATTCTGTTCCATGCCGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR CCA 90 bp TCAGCACTGGGTACCCAGGAATGTGAATGCAACCCTGGCATGTTCACAGCTAACTCTTGCTTTATCGTATaGTGTGGGAGGGAAGTACCG +
Preference number: 2 (lower is better)
Translates to: SALGTQECECNPGMFTANSCFIV*CGREVP
Trigger: CGGTACTTCCCTCCCACACCATACGATAAAGCAAGA...GTTAGCTGTGAACATGCCAGGGTTGCATTCACATTCCTGGGTACCCAGTGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR CCA 90 bp CTCATTAAATCCAAGGAGCAGCGTATTTGCCACTGCAAGGCTTGTGGATGTGGCACACCCCATCAGCACTaGGTACCCAGGAATGTGAAT +
Preference number: 2 (lower is better)
Translates to: LIKSKEQRICHCKACGCGTPHQH*VPRNVN
Trigger: ATTCACATTCCTGGGTACCCAGTGCTGATGGGGTGT...GCCACATCCACAAGCCTTGCAGTGGCAAATACGCTGCTCCTTGGATTTAATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR CCA 90 bp GTCGGCATGGAACAGAATCACGTGTGTGGCTCTTGTCCACTTTCCCGAAGCCCTAGAAATGCAAACAAGTaGCCTTCTGTGCCCCATTTA +
Preference number: 2 (lower is better)
Translates to: VGMEQNHVCGSCPLSRSPRNANK*PSVPHL
Trigger: TAAATGGGGCACAGAAGGCCACTTGTTTGCATTTCT...AGGGCTTCGGGAAAGTGGACAAGAGCCACACACGTGATTCTGTTCCATGCCGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR CAA 90 bp CCATGTGACTGGGAAGCAAATCAAAGGAAGCCGAGTTTTAACCTGTaGATTCTTAAGAGCGATGAAGGGGGACAGGAGAGTCTGTGGCCT +
Preference number: 2 (lower is better)
Translates to: PCDWEANQRKPSFNL*ILKSDEGGQESLWP
Trigger: AGGCCACAGACTCTCCTGTCCCCCTTCATCGCTCTTAAGAATCAACAGGTTAAAACTCGGCTTCCTTTGATTTGCTTCCCAGTCACATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR CAA 90 bp GAACAGAATCACGTGTGTGGCTCTTGTCCACTTTCCCGAAGCCCTTaGATTAACTCCTTGGCCCTACTAGCTTTAGACAGTTCCCTGATC +
Preference number: 2 (lower is better)
Translates to: EQNHVCGSCPLSRSP*INSLALLALDSSLI
Trigger: GATCAGGGAACTGTCTAAAGCTAGTAGGGCCAAGGAGTTAATCAAAGGGCTTCGGGAAAGTGGACAAGAGCCACACACGTGATTCTGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR TCA 90 bp AGTGACCCATTTATTCCCCAGTTACCCATAATGAAAAATAGTTCTGTCATTTACGCCTGCTGTGCAGGGTaGCCGAGGCGCGATGGCACA +
Preference number: 2 (lower is better)
Translates to: SDPFIPQLPIMKNSSVIYACCAG*PRRDGT
Trigger: TGTGCCATCGCGCCTCGGTCACCCTGCACAGCAGGC...GTAAATGACAGAACTATTTTTCATTATGGGTAACTGGGGAATAAATGGGTCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR TCA 90 bp CTCATTAAATCCAAGGAGCAGCGTATTTGCCACTGCAAGGCTTGTGGATGTGGCCTTTGTACGGCCATGTaGCTGGGAAGCAAATCAAAG +
Preference number: 2 (lower is better)
Translates to: LIKSKEQRICHCKACGCGLCTAM*LGSKSK
Trigger: CTTTGATTTGCTTCCCAGTCACATGGCCGTACAAAG...GCCACATCCACAAGCCTTGCAGTGGCAAATACGCTGCTCCTTGGATTTAATGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR TCA 90 bp TCAGCACTGGGTACCCAGGAATGTGAATGCAACCCTGGCATGTTCACAGCTAACTGTACCGCAGAGTTATaGCTAAGGATAGCAGAACCA +
Preference number: 2 (lower is better)
Translates to: SALGTQECECNPGMFTANCTAEL*LRIAEP
Trigger: TGGTTCTGCTATCCTTAGTCATAACTCTGCGGTACA...GTTAGCTGTGAACATGCCAGGGTTGCATTCACATTCCTGGGTACCCAGTGCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR GCA 90 bp GTCGGCATGGAACAGAATCACGTGTGTGGCTCTTGTCCACTTTCCCGAAGCCCTAACCTGGCATTAGAATaGTGGATGAGACTTAAAGCT +
Preference number: 2 (lower is better)
Translates to: VGMEQNHVCGSCPLSRSPNLALE*WMRLKA
Trigger: AGCTTTAAGTCTCATCCAGCATTCTAATGCCAGGTT...AGGGCTTCGGGAAAGTGGACAAGAGCCACACACGTGATTCTGTTCCATGCCGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR GCA 90 bp GACAAATCCAAACAGATATTCGTCAAACGAAGGAGTCACACAAATCTCCGATTTTCCCGCTGGTGGCCCTaGCAAAACGGTCCCCACATG +
Preference number: 2 (lower is better)
Translates to: DKSKQIFVKRRSHTNLRFSRWWP*QNGPHM
Trigger: CATGTGGGGACCGTTTTGGCAGGGCCACCAGCGGGA...AAATCGGAGATTTGTGTGACTCCTTCGTTTGACGAATATCTGTTTGGATTTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000505140.1
3UTR-3UTR CCA 90 bp AGAAACGCAGGAGAATATGCCAGTTCTCAGTTTTGCCTCAAAGTTGTTAGGCTGGGCAGCTGTGTCTTTTaGGTTTTCGTGAGGCAGGGG +
Preference number: 2 (lower is better)
Translates to: RNAGEYASSQFCLKVVRLGSCVF*VFVRQG
Trigger: CCCCTGCCTCACGAAAACCCAAAAGACACAGCTGCC...CAGCCTAACAACTTTGAGGCAAAACTGAGAACTGGCATATTCTCCTGCGTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR CCA 90 bp GTCCTGGGCACTGTTCTGCTGGGAGTTACTGAAGTAGAAAGATTTTTAAATACAGGACAGGAGAGTCTGTaGCCTGCTGTGCAGGGTGAC +
Preference number: 2 (lower is better)
Translates to: VLGTVLLGVTEVERFLNTGQESL*PAVQGD
Trigger: GTCACCCTGCACAGCAGGCCACAGACTCTCCTGTCC...TGTATTTAAAAATCTTTCTACTTCAGTAACTCCCAGCAGAACAGTGCCCAGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR CCA 90 bp TGTCCACTTTCCCGAAGCCCTTTGATTAACTCCTTGGCCCTACTAGCTTTAGACCGCCTCCTGCATGTGTaGAGTAGATGGTTTCGAACT +
Preference number: 2 (lower is better)
Translates to: CPLSRSPLINSLALLALDRLLHV*SRWFRT
Trigger: AGTTCGAAACCATCTACTCCACACATGCAGGAGGCG...GTCTAAAGCTAGTAGGGCCAAGGAGTTAATCAAAGGGCTTCGGGAAAGTGGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR CCA 90 bp GTCGGCATGGAACAGAATCACGTGTGTGGCTCTTGTCCACTTTCCCGAAGCCCTCTGGCATTAGAATGCTaGATGAGACTTAAAGCTTCA +
Preference number: 2 (lower is better)
Translates to: VGMEQNHVCGSCPLSRSPLALEC*MRLKAS
Trigger: TGAAGCTTTAAGTCTCATCCAGCATTCTAATGCCAG...AGGGCTTCGGGAAAGTGGACAAGAGCCACACACGTGATTCTGTTCCATGCCGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR CCA 90 bp GTCGGCATGGAACAGAATCACGTGTGTGGCTCTTGTCCACTTTCCCGAAGCCCTCCCAAGGTTATTTATTaGGAAGACTCAGAGAGTGAA +
Preference number: 2 (lower is better)
Translates to: VGMEQNHVCGSCPLSRSPPKVIY*EDSESE
Trigger: TTCACTCTCTGAGTCTTCCCAATAAATAACCTTGGG...AGGGCTTCGGGAAAGTGGACAAGAGCCACACACGTGATTCTGTTCCATGCCGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR CAA 90 bp TCTAGGAGAACGCAGAGTGAAATGCTATCATTCAACCATGTCAGTTaGCTGCCCCCGGGGCATTTCAAACCAAACCTTTCTACGGGAGAT +
Preference number: 2 (lower is better)
Translates to: SRRTQSEMLSFNHVS*LPPGHFKPNLSTGD
Trigger: ATCTCCCGTAGAAAGGTTTGGTTTGAAATGCCCCGGGGGCAGCAAACTGACATGGTTGAATGATAGCATTTCACTCTGCGTTCTCCTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR CAA 90 bp CAAGTCCTGCCAAATCAGCTCCATTGTGGTGGCCTGAGTGTGGCATaGCTTCCTGTGTTCTCAGAAACTCTAACCAAATATTATGGCCCA +
Preference number: 2 (lower is better)
Translates to: QVLPNQLHCGGLSVA*LPVFSETLTKYYGP
Trigger: TGGGCCATAATATTTGGTTAGAGTTTCTGAGAACACAGGAAGCAATGCCACACTCAGGCCACCACAATGGAGCTGATTTGGCAGGACTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR TCA 90 bp ATCGCTGTGGGGTGCTGGGTGATTGGTGTTGATGTGTACCCTGTACTCCTTTGTTTTGAGTGCTTTATATaGGAGCCATCAGAGGACTGT +
Preference number: 2 (lower is better)
Translates to: IAVGCWVIGVDVYPVLLCFECFI*EPSEDC
Trigger: ACAGTCCTCTGATGGCTCTCATATAAAGCACTCAAA...ACAAAGGAGTACAGGGTACACATCAACACCAATCACCCAGCACCCCACAGCGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR GCA 90 bp AGAAACGCAGGAGAATATGCCAGTTCTCAGTTTTGCCTCAAAGTTGTTAGGCTGTCAACCATGTCAGTTTaGTGCCCCCGGGGCATTTCA +
Preference number: 2 (lower is better)
Translates to: RNAGEYASSQFCLKVVRLSTMSV*CPRGIS
Trigger: TGAAATGCCCCGGGGGCAGCAAACTGACATGGTTGA...CAGCCTAACAACTTTGAGGCAAAACTGAGAACTGGCATATTCTCCTGCGTTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR GCA 90 bp CAAGTCCTGCCAAATCAGCTCCATTGTGGTGGCCTGAGTGTGGCATTGCTTCCTACAATACGTTTCAACTaGAGGTATGTTGAGCACACA +
Preference number: 2 (lower is better)
Translates to: QVLPNQLHCGGLSVALLPTIRFN*RYVEHT
Trigger: TGTGTGCTCAACATACCTGCAGTTGAAACGTATTGT...AGGAAGCAATGCCACACTCAGGCCACCACAATGGAGCTGATTTGGCAGGACTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR CCA 90 bp GAAGAAACGCAGGAGAATATGCCAGTTCTCAGTTTTGCCTCAAAGTTGTTAGGCCATGTGTGGAGTAGATaGTTTCGAACTCCGTGGCGG +
Preference number: 2 (lower is better)
Translates to: EETQENMPVLSFASKLLGHVWSR*FRTPWR
Trigger: CCGCCACGGAGTTCGAAACCATCTACTCCACACATG...GCCTAACAACTTTGAGGCAAAACTGAGAACTGGCATATTCTCCTGCGTTTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR CCA 90 bp AGAAACGCAGGAGAATATGCCAGTTCTCAGTTTTGCCTCAAAGTTGTTAGGCTGTCATGCGGCAGGGTCTaGAATCTGGAGATGCGCTTT +
Preference number: 2 (lower is better)
Translates to: RNAGEYASSQFCLKVVRLSCGRV*NLEMRF
Trigger: AAAGCGCATCTCCAGATTCCAGACCCTGCCGCATGA...CAGCCTAACAACTTTGAGGCAAAACTGAGAACTGGCATATTCTCCTGCGTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR CCA 90 bp TGTCCACTTTCCCGAAGCCCTTTGATTAACTCCTTGGCCCTACTAGCTTTAGACAAATCAGCTCCATTGTaGTGGCCTGAGTGTGGCATT +
Preference number: 2 (lower is better)
Translates to: CPLSRSPLINSLALLALDKSAPL*WPECGI
Trigger: AATGCCACACTCAGGCCACCACAATGGAGCTGATTT...GTCTAAAGCTAGTAGGGCCAAGGAGTTAATCAAAGGGCTTCGGGAAAGTGGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR CAA 90 bp GTGTGTGGCTCTTGTCCACTTTCCCGAAGCCCTTTGATTAACTCCTaGGCCCTACTAGCTTTAGACAGTTCCCTGATCAGTACATCATTA +
Preference number: 2 (lower is better)
Translates to: VCGSCPLSRSPLINS*ALLALDSSLISTSL
Trigger: TAATGATGTACTGATCAGGGAACTGTCTAAAGCTAGTAGGGCCAAGGAGTTAATCAAAGGGCTTCGGGAAAGTGGACAAGAGCCACACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR TCA 90 bp CAAGTCCTGCCAAATCAGCTCCATTGTGGTGGCCTGAGTGTGGCATTGCTTCCTAGTTCTGTCATTTACTaGGCCTTACATTCAAATGCA +
Preference number: 2 (lower is better)
Translates to: QVLPNQLHCGGLSVALLPSSVIY*ALHSNA
Trigger: TGCATTTGAATGTAAGGCTCAGTAAATGACAGAACT...AGGAAGCAATGCCACACTCAGGCCACCACAATGGAGCTGATTTGGCAGGACTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR TCA 90 bp GCTGTGGGGTGCTGGGTGATTGGTGTTGATGTGTACCCTGTACTCCTTTGTTACCTATTTCCTATGCTTTaGGCTGCCCAAACCTATTAT +
Preference number: 2 (lower is better)
Translates to: AVGCWVIGVDVYPVLLCYLFPML*AAQTYY
Trigger: ATAATAGGTTTGGGCAGCTCAAAGCATAGGAAATAG...GTAACAAAGGAGTACAGGGTACACATCAACACCAATCACCCAGCACCCCACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR GCA 90 bp AGTGACCCATTTATTCCCCAGTTACCCATAATGAAAAATAGTTCTGTCATTTACCTGACTGACTGTCCCTaGAGTGCCCATGGCGTCCCG +
Preference number: 2 (lower is better)
Translates to: SDPFIPQLPIMKNSSVIYLTDCP*SAHGVP
Trigger: CGGGACGCCATGGGCACTGCAGGGACAGTCAGTCAG...GTAAATGACAGAACTATTTTTCATTATGGGTAACTGGGGAATAAATGGGTCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR GCA 90 bp TGTCCACTTTCCCGAAGCCCTTTGATTAACTCCTTGGCCCTACTAGCTTTAGACTGCATGGATTTCGAATaGGTTATTTCAGGGAGGACC +
Preference number: 2 (lower is better)
Translates to: CPLSRSPLINSLALLALDCMDFE*VISGRT
Trigger: GGTCCTCCCTGAAATAACGCATTCGAAATCCATGCA...GTCTAAAGCTAGTAGGGCCAAGGAGTTAATCAAAGGGCTTCGGGAAAGTGGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR CCA 90 bp CCAATGCCCCATCGCTGGAGAGCTTGCAGCGCTAGATTTTCAATGACGCCACATCAAACTAGAAATAAATaGTCAAGACCGGCTTATCAG +
Preference number: 2 (lower is better)
Translates to: PMPHRWRACSARFSMTPHQTRNK*SRPAYQ
Trigger: CTGATAAGCCGGTCTTGACCATTTATTTCTAGTTTG...ATGTGGCGTCATTGAAAATCTAGCGCTGCAAGCTCTCCAGCGATGGGGCATTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505140.1
3UTR-3UTR TCA 90 bp CAAACGGGAGAGTTTCCTGCCAATGTGCAAATCCGTCAATACTCCCTGAGCCATCGAGTTTTAACCTGTTaGTTCTTAAGAGCGATGAAG +
Preference number: 2 (lower is better)
Translates to: QTGEFPANVQIRQYSLSHRVLTC*FLRAMK
Trigger: CTTCATCGCTCTTAAGAATCAACAGGTTAAAACTCG...ATGGCTCAGGGAGTATTGACGGATTTGCACATTGGCAGGAAACTCTCCCGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR TCA 90 bp TGTCCACTTTCCCGAAGCCCTTTGATTAACTCCTTGGCCCTACTAGCTTTAGACACTGATCTTGATCACTaGAGGAATCTCTGGAGTTGT +
Preference number: 2 (lower is better)
Translates to: CPLSRSPLINSLALLALDTDLDH*RNLWSC
Trigger: ACAACTCCAGAGATTCCTTCAGTGATCAAGATCAGT...GTCTAAAGCTAGTAGGGCCAAGGAGTTAATCAAAGGGCTTCGGGAAAGTGGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR TCA 90 bp CTCATTAAATCCAAGGAGCAGCGTATTTGCCACTGCAAGGCTTGTGGATGTGGCTTTAGAGATCCTGGTTaGTTGCAAATGAAGCAGAGA +
Preference number: 2 (lower is better)
Translates to: LIKSKEQRICHCKACGCGFRDPG*LQMKQR
Trigger: TCTCTGCTTCATTTGCAATCAACCAGGATCTCTAAA...GCCACATCCACAAGCCTTGCAGTGGCAAATACGCTGCTCCTTGGATTTAATGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR GCA 90 bp CAAGTCCTGCCAAATCAGCTCCATTGTGGTGGCCTGAGTGTGGCATTGCTTCCTAAAAATATACTGCACTaGATGGATTTCGAATGCGTT +
Preference number: 2 (lower is better)
Translates to: QVLPNQLHCGGLSVALLPKNILH*MDFECV
Trigger: AACGCATTCGAAATCCATGCAGTGCAGTATATTTTT...AGGAAGCAATGCCACACTCAGGCCACCACAATGGAGCTGATTTGGCAGGACTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR GCA 90 bp TGTCCACTTTCCCGAAGCCCTTTGATTAACTCCTTGGCCCTACTAGCTTTAGACCCTTACTATTTCCTATaGTTTGAGCTGCCCAAACCT +
Preference number: 2 (lower is better)
Translates to: CPLSRSPLINSLALLALDPYYFL*FELPKP
Trigger: AGGTTTGGGCAGCTCAAAGCATAGGAAATAGTAAGG...GTCTAAAGCTAGTAGGGCCAAGGAGTTAATCAAAGGGCTTCGGGAAAGTGGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR CCA 90 bp AGAAACGCAGGAGAATATGCCAGTTCTCAGTTTTGCCTCAAAGTTGTTAGGCTGACAGCTGCAGTCCTTTaGTTCCAAGAGGAGATTGTC +
Preference number: 2 (lower is better)
Translates to: RNAGEYASSQFCLKVVRLTAAVL*FQEEIV
Trigger: GACAATCTCCTCTTGGAACCAAAGGACTGCAGCTGT...CAGCCTAACAACTTTGAGGCAAAACTGAGAACTGGCATATTCTCCTGCGTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR CCA 90 bp AACTGCAGGTATGTTGAGCACACAAGCAATCACCGTATTGTATTAGAGACATTTTCTGTCAGCCTGCTGTaGTCACAGGTCTCCGTTCCT +
Preference number: 2 (lower is better)
Translates to: NCRYVEHTSNHRIVLETFSVSLL*SQVSVP
Trigger: AGGAACGGAGACCTGTGACCACAGCAGGCTGACAGA...AAATGTCTCTAATACAATACGGTGATTGCTTGTGTGCTCAACATACCTGCAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR CAA 90 bp AAAGTTAGCTCATGTATATACACGGTGGGGGTGAGAACTGACAGCTaGCTCAGATCTAGGAGAACGCAGAGTGAAATGCTATCATTCAAC +
Preference number: 2 (lower is better)
Translates to: KVSSCIYTVGVRTDS*LRSRRTQSEMLSFN
Trigger: GTTGAATGATAGCATTTCACTCTGCGTTCTCCTAGATCTGAGCAAGCTGTCAGTTCTCACCCCCACCGTGTATATACATGAGCTAACTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR CAA 90 bp TTGCATTTCTTAATCATCTCAAAAGCACGTGAACCTGAGGCTGCATaGGCCTTTGTACTCCCGTGCTACCTCTCCATCTTAGGATTTGTA +
Preference number: 2 (lower is better)
Translates to: LHFLIISKAREPEAA*AFVLPCYLSILGFV
Trigger: TACAAATCCTAAGATGGAGAGGTAGCACGGGAGTACAAAGGCCAATGCAGCCTCAGGTTCACGTGCTTTTGAGATGATTAAGAAATGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505140.1
3UTR-3UTR TCA 90 bp AGTGACCCATTTATTCCCCAGTTACCCATAATGAAAAATAGTTCTGTCATTTACGCCGAAGTGTCATCCTaGCTGACTGTCCCTGCAGTG +
Preference number: 2 (lower is better)
Translates to: SDPFIPQLPIMKNSSVIYAEVSS*LTVPAV
Trigger: CACTGCAGGGACAGTCAGTCAGGATGACACTTCGGC...GTAAATGACAGAACTATTTTTCATTATGGGTAACTGGGGAATAAATGGGTCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR TCA 90 bp GTCCTGGGCACTGTTCTGCTGGGAGTTACTGAAGTAGAAAGATTTTTAAATACACAACTGCAGGTATGTTaGGCACACAAGCAATCACCG +
Preference number: 2 (lower is better)
Translates to: VLGTVLLGVTEVERFLNTQLQVC*AHKQSP
Trigger: CGGTGATTGCTTGTGTGCTCAACATACCTGCAGTTG...TGTATTTAAAAATCTTTCTACTTCAGTAACTCCCAGCAGAACAGTGCCCAGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR TCA 90 bp GAAGAAACGCAGGAGAATATGCCAGTTCTCAGTTTTGCCTCAAAGTTGTTAGGCCTATTCCTACTCCAGTaGCCCATTTATTCCCCAGTT +
Preference number: 2 (lower is better)
Translates to: EETQENMPVLSFASKLLGLFLLQ*PIYSPV
Trigger: AACTGGGGAATAAATGGGTCACTGGAGTAGGAATAG...GCCTAACAACTTTGAGGCAAAACTGAGAACTGGCATATTCTCCTGCGTTTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR TCA 90 bp GTCCTGGGCACTGTTCTGCTGGGAGTTACTGAAGTAGAAAGATTTTTAAATACACCCTGGTCTTTGACATaGGAATCTCACAGGCATGGT +
Preference number: 2 (lower is better)
Translates to: VLGTVLLGVTEVERFLNTPWSLT*ESHRHG
Trigger: ACCATGCCTGTGAGATTCTCATGTCAAAGACCAGGG...TGTATTTAAAAATCTTTCTACTTCAGTAACTCCCAGCAGAACAGTGCCCAGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR TCA 90 bp TGTCCACTTTCCCGAAGCCCTTTGATTAACTCCTTGGCCCTACTAGCTTTAGACGGAACCACTTGGACTTaGCAGAGGTTTTTCAAAAAT +
Preference number: 2 (lower is better)
Translates to: CPLSRSPLINSLALLALDGTTWT*QRFFKN
Trigger: ATTTTTGAAAAACCTCTGTCAAGTCCAAGTGGTTCC...GTCTAAAGCTAGTAGGGCCAAGGAGTTAATCAAAGGGCTTCGGGAAAGTGGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR GCA 90 bp CTCATTAAATCCAAGGAGCAGCGTATTTGCCACTGCAAGGCTTGTGGATGTGGCCGTTATAAAATGTCTTaGTTTATCGTATGGTGTGGG +
Preference number: 2 (lower is better)
Translates to: LIKSKEQRICHCKACGCGRYKMS*FIVWCG
Trigger: CCCACACCATACGATAAAGCAAGACATTTTATAACG...GCCACATCCACAAGCCTTGCAGTGGCAAATACGCTGCTCCTTGGATTTAATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR CCA 90 bp AGAAACGCAGGAGAATATGCCAGTTCTCAGTTTTGCCTCAAAGTTGTTAGGCTGTGGTTTCGAACTCCGTaGCGGAAGGGAAATTTAAGA +
Preference number: 2 (lower is better)
Translates to: RNAGEYASSQFCLKVVRLWFRTP*RKGNLR
Trigger: TCTTAAATTTCCCTTCCGCCACGGAGTTCGAAACCA...CAGCCTAACAACTTTGAGGCAAAACTGAGAACTGGCATATTCTCCTGCGTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR CCA 90 bp GTACCTGGGAAATCAACTTGGACGCATTATAAAACAGAATCTCCCCACCGTCACCATTACCACCAGCCATaGGTAAATAAAAACCCAGCA +
Preference number: 2 (lower is better)
Translates to: VPGKSTWTHYKTESPHRHHYHQP*VNKNPA
Trigger: TGCTGGGTTTTTATTTACCCATGGCTGGTGGTAATG...GTGACGGTGGGGAGATTCTGTTTTATAATGCGTCCAAGTTGATTTCCCAGGTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000505140.1
3UTR CAA 90 bp GAAGAAACGCAGGAGAATATGCCAGTTCTCAGTTTTGCCTCAAAGTaGTTAGGCTGTGACTTAAGCAGCCCAAGTGAAGAAAATGTACGA +
Preference number: 2 (lower is better)
Translates to: EETQENMPVLSFASK*LGCDLSSPSEENVR
Trigger: TCGTACATTTTCTTCACTTGGGCTGCTTAAGTCACAGCCTAACAACTTTGAGGCAAAACTGAGAACTGGCATATTCTCCTGCGTTTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR CAA 90 bp AGCTGGTCTGTCCCCTTCTTTAACCTAAGGAAACCACTTAAACTCTaGGAGAGAGAAAGGGTGCCTAGTTCTTGTGTGCTTTTGTTTACA +
Preference number: 2 (lower is better)
Translates to: SWSVPFFNLRKPLKL*ERERVPSSCVLLFT
Trigger: TGTAAACAAAAGCACACAAGAACTAGGCACCCTTTCTCTCTCCAAGAGTTTAAGTGGTTTCCTTAGGTTAAAGAAGGGGACAGACCAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR TCA 90 bp AGTGACCCATTTATTCCCCAGTTACCCATAATGAAAAATAGTTCTGTCATTTACTATACACGGTGGGGGTaGGAACTGACAGCTTGCTCA +
Preference number: 2 (lower is better)
Translates to: SDPFIPQLPIMKNSSVIYYTRWG*ELTACS
Trigger: TGAGCAAGCTGTCAGTTCTCACCCCCACCGTGTATA...GTAAATGACAGAACTATTTTTCATTATGGGTAACTGGGGAATAAATGGGTCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR GCA 90 bp AGTGACCCATTTATTCCCCAGTTACCCATAATGAAAAATAGTTCTGTCATTTACACCATGTCAGTTTGCTaGCCCCGGGGCATTTCAAAC +
Preference number: 2 (lower is better)
Translates to: SDPFIPQLPIMKNSSVIYTMSVC*PRGISN
Trigger: GTTTGAAATGCCCCGGGGGCAGCAAACTGACATGGT...GTAAATGACAGAACTATTTTTCATTATGGGTAACTGGGGAATAAATGGGTCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR TCA 90 bp GTCCTGGGCACTGTTCTGCTGGGAGTTACTGAAGTAGAAAGATTTTTAAATACAAAACCAGTCAGCTACTaGGTCTTCAAATCGATGTGT +
Preference number: 2 (lower is better)
Translates to: VLGTVLLGVTEVERFLNTKPVSY*VFKSMC
Trigger: ACACATCGATTTGAAGACTCAGTAGCTGACTGGTTT...TGTATTTAAAAATCTTTCTACTTCAGTAACTCCCAGCAGAACAGTGCCCAGGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR GCA 90 bp GTCCTGGGCACTGTTCTGCTGGGAGTTACTGAAGTAGAAAGATTTTTAAATACAGGTAACTTTCTAAAATaGAGCTGTCAGCTGAATGCC +
Preference number: 2 (lower is better)
Translates to: VLGTVLLGVTEVERFLNTGNFLK*SCQLNA
Trigger: GGCATTCAGCTGACAGCTGCATTTTAGAAAGTTACC...TGTATTTAAAAATCTTTCTACTTCAGTAACTCCCAGCAGAACAGTGCCCAGGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR CAA 90 bp CCTGTGTTCTCAGAAACTCTAACCAAATATTATGGCCCACTGATCTaGATCACTGAAGGAATCTCTGGAGTTGTATTTCCTCATCTCATA +
Preference number: 2 (lower is better)
Translates to: PVFSETLTKYYGPLI*ITEGISGVVFPHLI
Trigger: TATGAGATGAGGAAATACAACTCCAGAGATTCCTTCAGTGATCAAGATCAGTGGGCCATAATATTTGGTTAGAGTTTCTGAGAACACAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR CCA 90 bp AGTGACCCATTTATTCCCCAGTTACCCATAATGAAAAATAGTTCTGTCATTTACCTTTATCGTATGGTGTaGGAGGGAAGTACCGTAGTA +
Preference number: 2 (lower is better)
Translates to: SDPFIPQLPIMKNSSVIYLYRMV*EGSTVV
Trigger: TACTACGGTACTTCCCTCCCACACCATACGATAAAG...GTAAATGACAGAACTATTTTTCATTATGGGTAACTGGGGAATAAATGGGTCACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR CAA 90 bp AATGACGGACTTTATAAAACTGCTGCCAATAAGGTACAATGTTCATaGATACAATACGTTTCAACTGCAGGTATGTTGAGCACACAAGCA +
Preference number: 2 (lower is better)
Translates to: NDGLYKTAANKVQCS*IQYVSTAGMLSTQA
Trigger: TGCTTGTGTGCTCAACATACCTGCAGTTGAAACGTATTGTATCAATGAACATTGTACCTTATTGGCAGCAGTTTTATAAAGTCCGTCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR CCA 90 bp AGTGACCCATTTATTCCCCAGTTACCCATAATGAAAAATAGTTCTGTCATTTACATATACTGCACTGCATaGATTTCGAATGCGTTATTT +
Preference number: 2 (lower is better)
Translates to: SDPFIPQLPIMKNSSVIYIYCTA*ISNALF
Trigger: AAATAACGCATTCGAAATCCATGCAGTGCAGTATAT...GTAAATGACAGAACTATTTTTCATTATGGGTAACTGGGGAATAAATGGGTCACT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR TCA 72 bp CAGCCTGCTGTGGTCACAGGTCTCCGTTCCTCAGTGTaGACGGGGACTCCGGGCTGCAGCGTGCCACCCGCC +
Preference number: 3 (lower is better)
Translates to: QPAVVTGLRSSV*TGTPGCSVPPA
Trigger: GGCGGGTGGCACGCTGCAGCCCGGAGTCCCCGTTCACACTGAGGAACGGAGACCTGTGACCACAGCAGGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR GCA 72 bp GCGATGAAGGGGGACAGGAGAGTCTGTGGCCTGCTGTaGAGGGTGACCGAGGCGCGATGGCACAGCTGCAGT +
Preference number: 3 (lower is better)
Translates to: AMKGDRRVCGLL*RVTEARWHSCS
Trigger: ACTGCAGCTGTGCCATCGCGCCTCGGTCACCCTGCACAGCAGGCCACAGACTCTCCTGTCCCCCTTCATCGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR GCA 72 bp ACGGGGACTCCGGGCTGCAGCGTGCCACCCGCCTCCTaGATGTGTGGAGTAGATGGTTTCGAACTCCGTGGC +
Preference number: 3 (lower is better)
Translates to: TGTPGCSVPPAS*MCGVDGFELRG
Trigger: GCCACGGAGTTCGAAACCATCTACTCCACACATGCAGGAGGCGGGTGGCACGCTGCAGCCCGGAGTCCCCGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR GCA 72 bp TGCCGCTCGTCACACGCTCTGGCCACTTGGGACACCTaGCCATCAGGGTGGCATGTCACTGCCTCCCCATCA +
Preference number: 3 (lower is better)
Translates to: CRSSHALATWDT*PSGWHVTASPS
Trigger: TGATGGGGAGGCAGTGACATGCCACCCTGATGGGCAGGTGTCCCAAGTGGCCAGAGCGTGTGACGAGCGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505140.1
3UTR CCA 72 bp TCCGGGCTGCAGCGTGCCACCCGCCTCCTGCATGTGTaGAGTAGATGGTTTCGAACTCCGTGGCGGAAGGGA +
Preference number: 3 (lower is better)
Translates to: SGLQRATRLLHV*SRWFRTPWRKG
Trigger: TCCCTTCCGCCACGGAGTTCGAAACCATCTACTCCACACATGCAGGAGGCGGGTGGCACGCTGCAGCCCGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR TCA 72 bp TATTCCAACCAGGAGAGAGATCCAGAGGGCTGGGAGTaGGCACTCCTGAGCTGGCCCCGCTGCGACGCATCC +
Preference number: 3 (lower is better)
Translates to: YSNQERDPEGWE*ALLSWPRCDAS
Trigger: GGATGCGTCGCAGCGGGGCCAGCTCAGGAGTGCTCACTCCCAGCCCTCTGGATCTCTCTCCTGGTTGGAATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR TCA 72 bp ATGTGGCAGCCCTGGGGTAAGGGACCTGCTGCACGGTaGCATGACCATCGCTGTGGGGTGCTGGGTGATTGG +
Preference number: 3 (lower is better)
Translates to: MWQPWGKGPAAR*HDHRCGVLGDW
Trigger: CCAATCACCCAGCACCCCACAGCGATGGTCATGTCACCGTGCAGCAGGTCCCTTACCCCAGGGCTGCCACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR CCA 72 bp ATACAGGAGTGCCGCTCGTCACACGCTCTGGCCACTTaGGACACCTGCCCATCAGGGTGGCATGTCACTGCC +
Preference number: 3 (lower is better)
Translates to: IQECRSSHALAT*DTCPSGWHVTA
Trigger: GGCAGTGACATGCCACCCTGATGGGCAGGTGTCCCAAGTGGCCAGAGCGTGTGACGAGCGGCACTCCTGTAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505140.1
3UTR GCA 72 bp CTGCTGTGCAGGGTGACCGAGGCGCGATGGCACAGCTaGAGTCCTTTGGTTCCAAGAGGAGATTGTCCAGGG +
Preference number: 3 (lower is better)
Translates to: LLCRVTEARWHS*SPLVPRGDCPG
Trigger: CCCTGGACAATCTCCTCTTGGAACCAAAGGACTGCAGCTGTGCCATCGCGCCTCGGTCACCCTGCACAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR CCA 72 bp GTCTGTGGCCTGCTGTGCAGGGTGACCGAGGCGCGATaGCACAGCTGCAGTCCTTTGGTTCCAAGAGGAGAT +
Preference number: 3 (lower is better)
Translates to: VCGLLCRVTEAR*HSCSPLVPRGD
Trigger: ATCTCCTCTTGGAACCAAAGGACTGCAGCTGTGCCATCGCGCCTCGGTCACCCTGCACAGCAGGCCACAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR CCA 72 bp CACTCTGAGGAAGCACGCCAAGGACATGTCCCCACGTaGGCACACCCCATCAGCACTGGGTACCCAGGAATG +
Preference number: 3 (lower is better)
Translates to: HSEEARQGHVPT*AHPISTGYPGM
Trigger: CATTCCTGGGTACCCAGTGCTGATGGGGTGTGCCCACGTGGGGACATGTCCTTGGCGTGCTTCCTCAGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR CCA 72 bp CACGCTCTGGCCACTTGGGACACCTGCCCATCAGGGTaGCATGTCACTGCCTCCCCATCACCAAATCCTCTC +
Preference number: 3 (lower is better)
Translates to: HALATWDTCPSG*HVTASPSPNPL
Trigger: GAGAGGATTTGGTGATGGGGAGGCAGTGACATGCCACCCTGATGGGCAGGTGTCCCAAGTGGCCAGAGCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505140.1
3UTR CCA 72 bp GTACCACAATACAGGAGTGCCGCTCGTCACACGCTCTaGCCACTTGGGACACCTGCCCATCAGGGTGGCATG +
Preference number: 3 (lower is better)
Translates to: VPQYRSAARHTL*PLGTPAHQGGM
Trigger: CATGCCACCCTGATGGGCAGGTGTCCCAAGTGGCCAGAGCGTGTGACGAGCGGCACTCCTGTATTGTGGTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505140.1
3UTR CCA 72 bp ATTCTTAAGAGCGATGAAGGGGGACAGGAGAGTCTGTaGCCTGCTGTGCAGGGTGACCGAGGCGCGATGGCA +
Preference number: 3 (lower is better)
Translates to: ILKSDEGGQESL*PAVQGDRGAMA
Trigger: TGCCATCGCGCCTCGGTCACCCTGCACAGCAGGCCACAGACTCTCCTGTCCCCCTTCATCGCTCTTAAGAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR CCA 72 bp AGGACATGTCCCCACGTGGGCACACCCCATCAGCACTaGGTACCCAGGAATGTGAATGCAACCCTGGCATGT +
Preference number: 3 (lower is better)
Translates to: RTCPHVGTPHQH*VPRNVNATLAC
Trigger: ACATGCCAGGGTTGCATTCACATTCCTGGGTACCCAGTGCTGATGGGGTGTGCCCACGTGGGGACATGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR CCA 72 bp ATCCAAGGAGCAGCGTATTTGCCACTGCAAGGCTTGTaGATGTGGCAGCCCTGGGGTAAGGGACCTGCTGCA +
Preference number: 3 (lower is better)
Translates to: IQGAAYLPLQGL*MWQPWGKGPAA
Trigger: TGCAGCAGGTCCCTTACCCCAGGGCTGCCACATCCACAAGCCTTGCAGTGGCAAATACGCTGCTCCTTGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR CAA 90 bp GTCGGCATGGAACAGAATCACGTGTGTGGCTCTTGTCCACTTTCCCGAAGCCCTGCCAAATCAGCTCCATaGTGGTGGCCTGAGTGTGGC +
Preference number: 3 (lower is better)
Translates to: VGMEQNHVCGSCPLSRSPAKSAP*WWPECG
Trigger: GCCACACTCAGGCCACCACAATGGAGCTGATTTGGC...AGGGCTTCGGGAAAGTGGACAAGAGCCACACACGTGATTCTGTTCCATGCCGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR GCA 72 bp GACCTGCTGCACGGTGACATGACCATCGCTGTGGGGTaGTGGGTGATTGGTGTTGATGTGTACCCTGTACTC +
Preference number: 3 (lower is better)
Translates to: DLLHGDMTIAVG*WVIGVDVYPVL
Trigger: GAGTACAGGGTACACATCAACACCAATCACCCAGCACCCCACAGCGATGGTCATGTCACCGTGCAGCAGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR CCA 72 bp CTCCTGCATGTGTGGAGTAGATGGTTTCGAACTCCGTaGCGGAAGGGAAATTTAAGAGGCCACCGGGGCTCC +
Preference number: 3 (lower is better)
Translates to: LLHVWSRWFRTP*RKGNLRGHRGS
Trigger: GGAGCCCCGGTGGCCTCTTAAATTTCCCTTCCGCCACGGAGTTCGAAACCATCTACTCCACACATGCAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR GCA 72 bp CAAAACGGTCCCCACATGCAAAGTGCAGGGTGCCAATaGCCCATCGCTGGAGAGCTTGCAGCGCTAGATTTT +
Preference number: 3 (lower is better)
Translates to: QNGPHMQSAGCQ*PIAGELAALDF
Trigger: AAAATCTAGCGCTGCAAGCTCTCCAGCGATGGGGCATTGGCACCCTGCACTTTGCATGTGGGGACCGTTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505140.1
3UTR CCA 72 bp CAGCGTGCCACCCGCCTCCTGCATGTGTGGAGTAGATaGTTTCGAACTCCGTGGCGGAAGGGAAATTTAAGA +
Preference number: 3 (lower is better)
Translates to: QRATRLLHVWSR*FRTPWRKGNLR
Trigger: TCTTAAATTTCCCTTCCGCCACGGAGTTCGAAACCATCTACTCCACACATGCAGGAGGCGGGTGGCACGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR CCA 72 bp GCTGTTTCATTCAAACCGTGGGTCCCTGCATGTTCATaGCCCCACACTTCAGGGAACCAGCATCTACCCGGT +
Preference number: 3 (lower is better)
Translates to: AVSFKPWVPACS*PHTSGNQHLPG
Trigger: ACCGGGTAGATGCTGGTTCCCTGAAGTGTGGGGCCATGAACATGCAGGGACCCACGGTTTGAATGAAACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR CCA 72 bp CTGCTGCACGGTGACATGACCATCGCTGTGGGGTGCTaGGTGATTGGTGTTGATGTGTACCCTGTACTCCTT +
Preference number: 3 (lower is better)
Translates to: LLHGDMTIAVGC*VIGVDVYPVLL
Trigger: AAGGAGTACAGGGTACACATCAACACCAATCACCCAGCACCCCACAGCGATGGTCATGTCACCGTGCAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR GCA 72 bp AAGTGCAGGGTGCCAATGCCCCATCGCTGGAGAGCTTaGAGCGCTAGATTTTCAATGACGCCACATGGAGAA +
Preference number: 3 (lower is better)
Translates to: KCRVPMPHRWRA*SARFSMTPHGE
Trigger: TTCTCCATGTGGCGTCATTGAAAATCTAGCGCTGCAAGCTCTCCAGCGATGGGGCATTGGCACCCTGCACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505140.1
3UTR CCA 72 bp GAAGGGGCCTTAGCAATAATGGCTCAAGCCTCCCATTaGACAGATGAGCAAGGTGAGGCCAAGAAGCGTGAG +
Preference number: 3 (lower is better)
Translates to: EGALAIMAQASH*TDEQGEAKKRE
Trigger: CTCACGCTTCTTGGCCTCACCTTGCTCATCTGTCCAATGGGAGGCTTGAGCCATTATTGCTAAGGCCCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR CAA 90 bp ATCGCTGTGGGGTGCTGGGTGATTGGTGTTGATGTGTACCCTGTACTCCTTTGTTTCAACCATGTCAGTTaGCTGCCCCCGGGGCATTTC +
Preference number: 3 (lower is better)
Translates to: IAVGCWVIGVDVYPVLLCFNHVS*LPPGHF
Trigger: GAAATGCCCCGGGGGCAGCAAACTGACATGGTTGAA...ACAAAGGAGTACAGGGTACACATCAACACCAATCACCCAGCACCCCACAGCGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR GCA 72 bp AACCTTTCTACGGGAGATTCTGTCCATCTGTCAGCCTaGTGTGGTCACAGGTCTCCGTTCCTCAGTGTGAAC +
Preference number: 3 (lower is better)
Translates to: NLSTGDSVHLSA*CGHRSPFLSVN
Trigger: GTTCACACTGAGGAACGGAGACCTGTGACCACAGCAGGCTGACAGATGGACAGAATCTCCCGTAGAAAGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR GCA 72 bp CACACCCCATCAGCACTGGGTACCCAGGAATGTGAATaGAACCCTGGCATGTTCACAGCTAACATTATGCCC +
Preference number: 3 (lower is better)
Translates to: HTPSALGTQECE*NPGMFTANIMP
Trigger: GGGCATAATGTTAGCTGTGAACATGCCAGGGTTGCATTCACATTCCTGGGTACCCAGTGCTGATGGGGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR GCA 72 bp GCTTTCAGTAGCTGTTTCATTCAAACCGTGGGTCCCTaGATGTTCATGGCCCCACACTTCAGGGAACCAGCA +
Preference number: 3 (lower is better)
Translates to: AFSSCFIQTVGP*MFMAPHFREPA
Trigger: TGCTGGTTCCCTGAAGTGTGGGGCCATGAACATGCAGGGACCCACGGTTTGAATGAAACAGCTACTGAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR GCA 72 bp AAAGGAAAGAAGAAAGACAGTACCACAATACAGGAGTaGCGCTCGTCACACGCTCTGGCCACTTGGGACACC +
Preference number: 3 (lower is better)
Translates to: KGKKKDSTTIQE*RSSHALATWDT
Trigger: GGTGTCCCAAGTGGCCAGAGCGTGTGACGAGCGGCACTCCTGTATTGTGGTACTGTCTTTCTTCTTTCCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505140.1
3UTR CCA 72 bp CCACCGGGGCTCCATCTCTTTGTACGGCCATGTGACTaGGAAGCAAATCAAAGGAAGCCGAGTTTTAACCTG +
Preference number: 3 (lower is better)
Translates to: PPGLHLFVRPCD*EANQRKPSFNL
Trigger: CAGGTTAAAACTCGGCTTCCTTTGATTTGCTTCCCAGTCACATGGCCGTACAAAGAGATGGAGCCCCGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR CAA 90 bp GTCGGCATGGAACAGAATCACGTGTGTGGCTCTTGTCCACTTTCCCGAAGCCCTATAATGAGGAGGCCCTaGCTGATCCTTCCTGGATTT +
Preference number: 3 (lower is better)
Translates to: VGMEQNHVCGSCPLSRSPIMRRP*LILPGF
Trigger: AAATCCAGGAAGGATCAGCAAGGGCCTCCTCATTAT...AGGGCTTCGGGAAAGTGGACAAGAGCCACACACGTGATTCTGTTCCATGCCGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR CAA 90 bp GCTGTGGGGTGCTGGGTGATTGGTGTTGATGTGTACCCTGTACTCCTTTGTTACGTGAGAACTGACAGCTaGCTCAGATCTAGGAGAACG +
Preference number: 3 (lower is better)
Translates to: AVGCWVIGVDVYPVLLCYVRTDS*LRSRRT
Trigger: CGTTCTCCTAGATCTGAGCAAGCTGTCAGTTCTCAC...GTAACAAAGGAGTACAGGGTACACATCAACACCAATCACCCAGCACCCCACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR CAA 90 bp GTCGGCATGGAACAGAATCACGTGTGTGGCTCTTGTCCACTTTCCCGAAGCCCTAAACCACTTAAACTCTaGGAGAGAGAAAGGGTGCCT +
Preference number: 3 (lower is better)
Translates to: VGMEQNHVCGSCPLSRSPKPLKL*ERERVP
Trigger: AGGCACCCTTTCTCTCTCCAAGAGTTTAAGTGGTTT...AGGGCTTCGGGAAAGTGGACAAGAGCCACACACGTGATTCTGTTCCATGCCGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR CAA 90 bp CTCATTAAATCCAAGGAGCAGCGTATTTGCCACTGCAAGGCTTGTGGATGTGGCCACAGCTGCAGTCCTTaGGTTCCAAGAGGAGATTGT +
Preference number: 3 (lower is better)
Translates to: LIKSKEQRICHCKACGCGHSCSP*VPRGDC
Trigger: ACAATCTCCTCTTGGAACCAAAGGACTGCAGCTGTG...GCCACATCCACAAGCCTTGCAGTGGCAAATACGCTGCTCCTTGGATTTAATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR GCA 72 bp ACAGCTTGCTCAGATCTAGGAGAACGCAGAGTGAAATaGTATCATTCAACCATGTCAGTTTGCTGCCCCCGG +
Preference number: 3 (lower is better)
Translates to: TACSDLGERRVK*YHSTMSVCCPR
Trigger: CCGGGGGCAGCAAACTGACATGGTTGAATGATAGCATTTCACTCTGCGTTCTCCTAGATCTGAGCAAGCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR GCA 72 bp GTGACTTTCCAAGCGCAAGCCTCGTCTAGTTCTTTTTaGTCAGTTGTTGTCTCACTGACGCCCTTTGCCACT +
Preference number: 3 (lower is better)
Translates to: VTFQAQASSSSF*SVVVSLTPFAT
Trigger: AGTGGCAAAGGGCGTCAGTGAGACAACAACTGAGCAAAAAGAACTAGACGAGGCTTGCGCTTGGAAAGTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR GCA 72 bp CCAAAATATCTCATTAAATCCAAGGAGCAGCGTATTTaGCACTGCAAGGCTTGTGGATGTGGCAGCCCTGGG +
Preference number: 3 (lower is better)
Translates to: PKYLIKSKEQRI*HCKACGCGSPG
Trigger: CCCAGGGCTGCCACATCCACAAGCCTTGCAGTGGCAAATACGCTGCTCCTTGGATTTAATGAGATATTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR CAA 90 bp AGAAACGCAGGAGAATATGCCAGTTCTCAGTTTTGCCTCAAAGTTGTTAGGCTGAGGCAGCTGTGTCTTTaGGGTTTTCGTGAGGCAGGG +
Preference number: 3 (lower is better)
Translates to: RNAGEYASSQFCLKVVRLRQLCL*GFREAG
Trigger: CCCTGCCTCACGAAAACCCAAAAGACACAGCTGCCT...CAGCCTAACAACTTTGAGGCAAAACTGAGAACTGGCATATTCTCCTGCGTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR CAA 90 bp GTCCTGGGCACTGTTCTGCTGGGAGTTACTGAAGTAGAAAGATTTTTAAATACACGGGGCTCCATCTCTTaGTACGGCCATGTGACTGGG +
Preference number: 3 (lower is better)
Translates to: VLGTVLLGVTEVERFLNTRGSIS*YGHVTG
Trigger: CCCAGTCACATGGCCGTACAAAGAGATGGAGCCCCG...TGTATTTAAAAATCTTTCTACTTCAGTAACTCCCAGCAGAACAGTGCCCAGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR CAA 90 bp TCAGCACTGGGTACCCAGGAATGTGAATGCAACCCTGGCATGTTCACAGCTAACTTTTGCCTTTCCAGCTaGCACTTCTATTCCTACTCC +
Preference number: 3 (lower is better)
Translates to: SALGTQECECNPGMFTANFCLSS*HFYSYS
Trigger: GGAGTAGGAATAGAAGTGCAAGCTGGAAAGGCAAAA...GTTAGCTGTGAACATGCCAGGGTTGCATTCACATTCCTGGGTACCCAGTGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR CAA 90 bp ATCGCTGTGGGGTGCTGGGTGATTGGTGTTGATGTGTACCCTGTACTCCTTTGTAGTATCCCAGACACGTaGCTCAAAAACATGCTTTCC +
Preference number: 3 (lower is better)
Translates to: IAVGCWVIGVDVYPVLLCSIPDT*LKNMLS
Trigger: GGAAAGCATGTTTTTGAGCAACGTGTCTGGGATACT...ACAAAGGAGTACAGGGTACACATCAACACCAATCACCCAGCACCCCACAGCGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR TCA 72 bp AAAAAGGGAACAAAATACGATGGGAGAGGGAAGAGATaGTGCCGAAGTGTCATCCTGACTGACTGTCCCTGC +
Preference number: 3 (lower is better)
Translates to: KKGTKYDGRGKR*CRSVILTDCPC
Trigger: GCAGGGACAGTCAGTCAGGATGACACTTCGGCATCATCTCTTCCCTCTCCCATCGTATTTTGTTCCCTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR CAA 90 bp CTCATTAAATCCAAGGAGCAGCGTATTTGCCACTGCAAGGCTTGTGGATGTGGCAGCAATCACTCAGTTTaGGAGAAAGTCACACCTGGT +
Preference number: 3 (lower is better)
Translates to: LIKSKEQRICHCKACGCGSNHSV*EKVTPG
Trigger: ACCAGGTGTGACTTTCTCCAAAACTGAGTGATTGCT...GCCACATCCACAAGCCTTGCAGTGGCAAATACGCTGCTCCTTGGATTTAATGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR CAA 90 bp GCTGTGGGGTGCTGGGTGATTGGTGTTGATGTGTACCCTGTACTCCTTTGTTACAAAGGAAGAGTAACTTaGGCACAAGACAAACCCGAT +
Preference number: 3 (lower is better)
Translates to: AVGCWVIGVDVYPVLLCYKGRVT*AQDKPD
Trigger: ATCGGGTTTGTCTTGTGCCAAAGTTACTCTTCCTTT...GTAACAAAGGAGTACAGGGTACACATCAACACCAATCACCCAGCACCCCACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR CAA 90 bp GCTGTGGGGTGCTGGGTGATTGGTGTTGATGTGTACCCTGTACTCCTTTGTTACGTAAAGAAGCTTTATTaGGCCCCATCTGATACATCC +
Preference number: 3 (lower is better)
Translates to: AVGCWVIGVDVYPVLLCYVKKLY*APSDTS
Trigger: GGATGTATCAGATGGGGCCAAATAAAGCTTCTTTAC...GTAACAAAGGAGTACAGGGTACACATCAACACCAATCACCCAGCACCCCACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR CAA 90 bp TGTCCACTTTCCCGAAGCCCTTTGATTAACTCCTTGGCCCTACTAGCTTTAGACGGACTGTGCACTAGTTaGATTGATGAAGACGTCGTC +
Preference number: 3 (lower is better)
Translates to: CPLSRSPLINSLALLALDGLCTS*IDEDVV
Trigger: GACGACGTCTTCATCAATCAAACTAGTGCACAGTCC...GTCTAAAGCTAGTAGGGCCAAGGAGTTAATCAAAGGGCTTCGGGAAAGTGGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR CAA 90 bp CTCATTAAATCCAAGGAGCAGCGTATTTGCCACTGCAAGGCTTGTGGATGTGGCCACTCCACTGCAATTTaGGTTCCAAAGAAAGGTGAG +
Preference number: 3 (lower is better)
Translates to: LIKSKEQRICHCKACGCGHSTAI*VPKKGE
Trigger: CTCACCTTTCTTTGGAACCAAAATTGCAGTGGAGTG...GCCACATCCACAAGCCTTGCAGTGGCAAATACGCTGCTCCTTGGATTTAATGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR CAA 90 bp ATCGCTGTGGGGTGCTGGGTGATTGGTGTTGATGTGTACCCTGTACTCCTTTGTATGCTTTCCTACGGTTaGAGTGCTTTATATGAGAGC +
Preference number: 3 (lower is better)
Translates to: IAVGCWVIGVDVYPVLLCMLSYG*SALYES
Trigger: GCTCTCATATAAAGCACTCAAACCGTAGGAAAGCAT...ACAAAGGAGTACAGGGTACACATCAACACCAATCACCCAGCACCCCACAGCGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR CAA 90 bp TCAGCACTGGGTACCCAGGAATGTGAATGCAACCCTGGCATGTTCACAGCTAACCCGAGTTTTAACCTGTaGATTCTTAAGAGCGATGAA +
Preference number: 3 (lower is better)
Translates to: SALGTQECECNPGMFTANPSFNL*ILKSDE
Trigger: TTCATCGCTCTTAAGAATCAACAGGTTAAAACTCGG...GTTAGCTGTGAACATGCCAGGGTTGCATTCACATTCCTGGGTACCCAGTGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR CAA 90 bp TGTCCACTTTCCCGAAGCCCTTTGATTAACTCCTTGGCCCTACTAGCTTTAGACTTACGCAAGGGTGGTTaGAACTTAGCTTTCAGTAGC +
Preference number: 3 (lower is better)
Translates to: CPLSRSPLINSLALLALDLRKGG*NLAFSS
Trigger: GCTACTGAAAGCTAAGTTCAAACCACCCTTGCGTAA...GTCTAAAGCTAGTAGGGCCAAGGAGTTAATCAAAGGGCTTCGGGAAAGTGGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR TCA 72 bp GGGAAGCAAATCAAAGGAAGCCGAGTTTTAACCTGTTaGTTCTTAAGAGCGATGAAGGGGGACAGGAGAGTC +
Preference number: 3 (lower is better)
Translates to: GKQIKGSRVLTC*FLRAMKGDRRV
Trigger: GACTCTCCTGTCCCCCTTCATCGCTCTTAAGAATCAACAGGTTAAAACTCGGCTTCCTTTGATTTGCTTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR TCA 72 bp CACCCTCCCTGGTTTGATCTCTCATGTCTAGCTGGATaGTGGGACTCGATTAGAAGAAACGCAGGAGAATAT +
Preference number: 3 (lower is better)
Translates to: HPPWFDLSCLAG*WDSIRRNAGEY
Trigger: ATATTCTCCTGCGTTTCTTCTAATCGAGTCCCATCATCCAGCTAGACATGAGAGATCAAACCAGGGAGGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR TCA 72 bp GTCACTACAGAACAAATGGCAACTGCACATTTAGGATaGCGTCCCTTGTGCTACTCAAACAGGCCACCAAAG +
Preference number: 3 (lower is better)
Translates to: VTTEQMATAHLG*RPLCYSNRPPK
Trigger: CTTTGGTGGCCTGTTTGAGTAGCACAAGGGACGTCATCCTAAATGTGCAGTTGCCATTTGTTCTGTAGTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR TCA 72 bp TTGCTCAGTTGTTGTCTCACTGACGCCCTTTGCCACTaGGATCCCTGTAAGTCACTACAGAACAAATGGCAA +
Preference number: 3 (lower is better)
Translates to: LLSCCLTDALCH*DPCKSLQNKWQ
Trigger: TTGCCATTTGTTCTGTAGTGACTTACAGGGATCTCAGTGGCAAAGGGCGTCAGTGAGACAACAACTGAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR CAA 90 bp CTCATTAAATCCAAGGAGCAGCGTATTTGCCACTGCAAGGCTTGTGGATGTGGCACTATTTCCTATGCTTaGAGCTGCCCAAACCTATTA +
Preference number: 3 (lower is better)
Translates to: LIKSKEQRICHCKACGCGTISYA*SCPNLL
Trigger: TAATAGGTTTGGGCAGCTCAAAGCATAGGAAATAGT...GCCACATCCACAAGCCTTGCAGTGGCAAATACGCTGCTCCTTGGATTTAATGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR TCA 72 bp CCGTGCTACCTCTCCATCTTAGGATTTGTAAATCGCTaGCAAATAAGCCATCATTCACTCCCAGCAAGGTGT +
Preference number: 3 (lower is better)
Translates to: PCYLSILGFVNR*QISHHSLPARC
Trigger: ACACCTTGCTGGGAGTGAATGATGGCTTATTTGTCAGCGATTTACAAATCCTAAGATGGAGAGGTAGCACGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505140.1
3UTR CCA 72 bp TATACCCACAGTTTTGATGTGAAACTGACAAACCTATaGGCTGACAGCCACAGCCCATGTAGAGGAATGACT +
Preference number: 3 (lower is better)
Translates to: YTHSFDVKLTNL*ADSHSPCRGMT
Trigger: AGTCATTCCTCTACATGGGCTGTGGCTGTCAGCCCATAGGTTTGTCAGTTTCACATCAAAACTGTGGGTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR CCA 72 bp ACAGAATCTCCCCACCGTCACCATTACCACCAGCCATaGGTAAATAAAAACCCAGCACTTAAGCTACTAGAA +
Preference number: 3 (lower is better)
Translates to: TESPHRHHYHQP*VNKNPALKLLE
Trigger: TTCTAGTAGCTTAAGTGCTGGGTTTTTATTTACCCATGGCTGGTGGTAATGGTGACGGTGGGGAGATTCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505140.1
3UTR CCA 72 bp AAAGCAAGCCTTCAGGAAAAGTCATGCGGCAGGGTCTaGAATCTGGAGATGCGCTTTTGTGACAATTTAAAA +
Preference number: 3 (lower is better)
Translates to: KASLQEKSCGRV*NLEMRFCDNLK
Trigger: TTTTAAATTGTCACAAAAGCGCATCTCCAGATTCCAGACCCTGCCGCATGACTTTTCCTGAAGGCTTGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR TCA 72 bp GATATGGAAGCCTCCAGCTTGAATACACTTCTTAAATaGATGAGTGTCGGCATGGAACAGAATCACGTGTGT +
Preference number: 3 (lower is better)
Translates to: DMEASSLNTLLK*MSVGMEQNHVC
Trigger: ACACACGTGATTCTGTTCCATGCCGACACTCATTCATTTAAGAAGTGTATTCAAGCTGGAGGCTTCCATATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR GCA 72 bp AGCCCAAGTGAAGAAAATGTACGAAGAAGGATCACGTaGTTTAAGGTGAAAGGTTTGAACAAGTCCTGCCAA +
Preference number: 3 (lower is better)
Translates to: SPSEENVRRRIT*FKVKGLNKSCQ
Trigger: TTGGCAGGACTTGTTCAAACCTTTCACCTTAAAGCACGTGATCCTTCTTCGTACATTTTCTTCACTTGGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR TCA 72 bp TTGCCTTTCCAGCTTGCACTTCTATTCCTACTCCAGTaGCCCATTTATTCCCCAGTTACCCATAATGAAAAA +
Preference number: 3 (lower is better)
Translates to: LPFQLALLFLLQ*PIYSPVTHNEK
Trigger: TTTTTCATTATGGGTAACTGGGGAATAAATGGGTCACTGGAGTAGGAATAGAAGTGCAAGCTGGAAAGGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR TCA 72 bp GATACTGGCTATAATTCTCCTGGAACCACTTGGACTTaGCAGAGGTTTTTCAAAAATGATTTAGGAGGCCCA +
Preference number: 3 (lower is better)
Translates to: DTGYNSPGTTWT*QRFFKNDLGGP
Trigger: TGGGCCTCCTAAATCATTTTTGAAAAACCTCTGTCAAGTCCAAGTGGTTCCAGGAGAATTATAGCCAGTATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR CCA 72 bp TTAGATTGTATTCATCCACAAGCAATCACTCAGTTTTaGAGAAAGTCACACCTGGTCTTTCCCTGGTCTTTG +
Preference number: 3 (lower is better)
Translates to: LDCIHPQAITQF*RKSHLVFPWSL
Trigger: CAAAGACCAGGGAAAGACCAGGTGTGACTTTCTCCAAAACTGAGTGATTGCTTGTGGATGAATACAATCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR-3UTR CAA 90 bp AGTGACCCATTTATTCCCCAGTTACCCATAATGAAAAATAGTTCTGTCATTTACTCAACTGCAGGTATGTaGAGCACACAAGCAATCACC +
Preference number: 3 (lower is better)
Translates to: SDPFIPQLPIMKNSSVIYSTAGM*STQAIT
Trigger: GGTGATTGCTTGTGTGCTCAACATACCTGCAGTTGA...GTAAATGACAGAACTATTTTTCATTATGGGTAACTGGGGAATAAATGGGTCACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR CCA 72 bp CAAAAGTTACCCTACAGCAACCTGGCATTAGAATGCTaGATGAGACTTAAAGCTTCAGTTCACTGTAAAAAC +
Preference number: 3 (lower is better)
Translates to: QKLPYSNLALEC*MRLKASVHCKN
Trigger: GTTTTTACAGTGAACTGAAGCTTTAAGTCTCATCCAGCATTCTAATGCCAGGTTGCTGTAGGGTAACTTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR TCA 72 bp CGTAGTACATTCTCAATTACCTGTACCGCAGAGTTATaGCTAAGGATAGCAGAACCAGGTAATATATCTACT +
Preference number: 3 (lower is better)
Translates to: RSTFSITCTAEL*LRIAEPGNIST
Trigger: AGTAGATATATTACCTGGTTCTGCTATCCTTAGTCATAACTCTGCGGTACAGGTAATTGAGAATGTACTACG
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR TCA 72 bp TCTAACCAAATATTATGGCCCACTGATCTTGATCACTaGAGGAATCTCTGGAGTTGTATTTCCTCATCTCAT +
Preference number: 3 (lower is better)
Translates to: SNQILWPTDLDH*RNLWSCISSSH
Trigger: ATGAGATGAGGAAATACAACTCCAGAGATTCCTTCAGTGATCAAGATCAGTGGGCCATAATATTTGGTTAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR TCA 72 bp AGGAGCTCTAGAAAACCCTTACTATTTCCTATGCTTTaGGCTGCCCAAACCTATTATTTCTCAGCATCTAAA +
Preference number: 3 (lower is better)
Translates to: RSSRKPLLFPML*AAQTYYFSASK
Trigger: TTTAGATGCTGAGAAATAATAGGTTTGGGCAGCTCAAAGCATAGGAAATAGTAAGGGTTTTCTAGAGCTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR TCA 90 bp AGACAGTACCACAATACAGGAGTGCCGCTCGTCACACGCTCTGGCCACTTGGGAGGGACTCGGAGCAGGTaGCTCCCCTCCGCCCCCGTG +
Preference number: 4 (lower is better)
Translates to: RQYHNTGVPLVTRSGHLGGTRSR*LPSAPV
Trigger: CACGGGGGCGGAGGGGAGTCACCTGCTCCGAGTCCC...TCCCAAGTGGCCAGAGCGTGTGACGAGCGGCACTCCTGTATTGTGGTACTGTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505140.1
3UTR CAA 72 bp AGGGTGACCGAGGCGCGATGGCACAGCTGCAGTCCTTaGGTTCCAAGAGGAGATTGTCCAGGGGAGGAGGAC +
Preference number: 4 (lower is better)
Translates to: RVTEARWHSCSP*VPRGDCPGEED
Trigger: GTCCTCCTCCCCTGGACAATCTCCTCTTGGAACCAAAGGACTGCAGCTGTGCCATCGCGCCTCGGTCACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR CAA 72 bp AATACAGGAGTGCCGCTCGTCACACGCTCTGGCCACTaGGGACACCTGCCCATCAGGGTGGCATGTCACTGC +
Preference number: 4 (lower is better)
Translates to: NTGVPLVTRSGH*GHLPIRVACHC
Trigger: GCAGTGACATGCCACCCTGATGGGCAGGTGTCCCAAGTGGCCAGAGCGTGTGACGAGCGGCACTCCTGTATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505140.1
CDS-3UTR TCA 90 bp ATCGCTGTGGGGTGCTGGGTGATTGGTGTTGATGTGTACCCTGTACTCCTTTGTGGGAGTGAGCACTCCTaGGCTGGCCCCGCTGCGACG +
Preference number: 4 (lower is better)
Translates to: IAVGCWVIGVDVYPVLLCGSEHS*AGPAAT
Trigger: CGTCGCAGCGGGGCCAGCTCAGGAGTGCTCACTCCC...ACAAAGGAGTACAGGGTACACATCAACACCAATCACCCAGCACCCCACAGCGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR GCA 90 bp GTCGGCATGGAACAGAATCACGTGTGTGGCTCTTGTCCACTTTCCCGAAGCCCTCCCACACACATCTGCTaGCGCGAGGGGACTCTGCGG +
Preference number: 4 (lower is better)
Translates to: VGMEQNHVCGSCPLSRSPPTHIC*REGTLR
Trigger: CCGCAGAGTCCCCTCGCGGCAGCAGATGTGTGTGGG...AGGGCTTCGGGAAAGTGGACAAGAGCCACACACGTGATTCTGTTCCATGCCGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR GCA 90 bp AAGACAGTACCACAATACAGGAGTGCCGCTCGTCACACGCTCTGGCCACTTGGGTCCCGCTGGTGGCCCTaGCAAAACGGTCCCCACATG +
Preference number: 4 (lower is better)
Translates to: KTVPQYRSAARHTLWPLGSRWWP*QNGPHM
Trigger: CATGTGGGGACCGTTTTGGCAGGGCCACCAGCGGGA...CCCAAGTGGCCAGAGCGTGTGACGAGCGGCACTCCTGTATTGTGGTACTGTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505140.1
CDS-3UTR GCA 90 bp AGGGTGCCAATGCCCCATCGCTGGAGAGCTTGCAGCGCTAGATTTTCAATGACGTTCTCCGAGCGCGGCTaGTCTAGCAGGGGATCCGCA +
Preference number: 4 (lower is better)
Translates to: RVPMPHRWRACSARFSMTFSERG*SSRGSA
Trigger: TGCGGATCCCCTGCTAGAGCAGCCGCGCTCGGAGAA...CGTCATTGAAAATCTAGCGCTGCAAGCTCTCCAGCGATGGGGCATTGGCACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000505140.1
CDS-3UTR GCA 90 bp CCAATGCCCCATCGCTGGAGAGCTTGCAGCGCTAGATTTTCAATGACGCCACATCCCACACACATCTGCTaGCGCGAGGGGACTCTGCGG +
Preference number: 4 (lower is better)
Translates to: PMPHRWRACSARFSMTPHPTHIC*REGTLR
Trigger: CCGCAGAGTCCCCTCGCGGCAGCAGATGTGTGTGGG...ATGTGGCGTCATTGAAAATCTAGCGCTGCAAGCTCTCCAGCGATGGGGCATTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000505140.1
CDS-3UTR GCA 90 bp GCTGTGGGGTGCTGGGTGATTGGTGTTGATGTGTACCCTGTACTCCTTTGTTACCCAGGCACAGGGTGGTaGAGCGCACAAGTGCGCCCA +
Preference number: 4 (lower is better)
Translates to: AVGCWVIGVDVYPVLLCYPGTGW*SAQVRP
Trigger: TGGGCGCACTTGTGCGCTGCACCACCCTGTGCCTGG...GTAACAAAGGAGTACAGGGTACACATCAACACCAATCACCCAGCACCCCACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR GCA 90 bp CAAACGGGAGAGTTTCCTGCCAATGTGCAAATCCGTCAATACTCCCTGAGCCATCTGAGCTGGCCCCGCTaGGACGCATCCTGGCGTCTG +
Preference number: 4 (lower is better)
Translates to: QTGEFPANVQIRQYSLSHLSWPR*DASWRL
Trigger: CAGACGCCAGGATGCGTCGCAGCGGGGCCAGCTCAG...ATGGCTCAGGGAGTATTGACGGATTTGCACATTGGCAGGAAACTCTCCCGTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CCA 90 bp ACTCCGTGGCGGAAGGGAAATTTAAGAGGCCACCGGGGCTCCATCTCTTTGTACGTGACCGAGGCGCGATaGCACAGCTGCAGTCCTTTG +
Preference number: 4 (lower is better)
Translates to: TPWRKGNLRGHRGSISLYVTEAR*HSCSPL
Trigger: CAAAGGACTGCAGCTGTGCCATCGCGCCTCGGTCAC...GTACAAAGAGATGGAGCCCCGGTGGCCTCTTAAATTTCCCTTCCGCCACGGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR TCA 90 bp AGGGTGCCAATGCCCCATCGCTGGAGAGCTTGCAGCGCTAGATTTTCAATGACGCGATGGCTATGTTGGTaGTGCCCAGGGGCACCAAGA +
Preference number: 4 (lower is better)
Translates to: RVPMPHRWRACSARFSMTRWLCW*CPGAPR
Trigger: TCTTGGTGCCCCTGGGCATCACCAACATAGCCATCG...CGTCATTGAAAATCTAGCGCTGCAAGCTCTCCAGCGATGGGGCATTGGCACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000505140.1
CDS-3UTR TCA 90 bp CTCATTAAATCCAAGGAGCAGCGTATTTGCCACTGCAAGGCTTGTGGATGTGGCCTCCGTTCCTCAGTGTaGACGGGGACTCCGGGCTGC +
Preference number: 4 (lower is better)
Translates to: LIKSKEQRICHCKACGCGLRSSV*TGTPGC
Trigger: GCAGCCCGGAGTCCCCGTTCACACTGAGGAACGGAG...GCCACATCCACAAGCCTTGCAGTGGCAAATACGCTGCTCCTTGGATTTAATGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR TCA 90 bp CAAGTCCTGCCAAATCAGCTCCATTGTGGTGGCCTGAGTGTGGCATTGCTTCCTTCCGTCAATACTCCCTaGGCCATGTGGCCGGCAGGT +
Preference number: 4 (lower is better)
Translates to: QVLPNQLHCGGLSVALLPSVNTP*AMWPAG
Trigger: ACCTGCCGGCCACATGGCTCAGGGAGTATTGACGGA...AGGAAGCAATGCCACACTCAGGCCACCACAATGGAGCTGATTTGGCAGGACTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR GCA 90 bp GTCGGCATGGAACAGAATCACGTGTGTGGCTCTTGTCCACTTTCCCGAAGCCCTCTGTGGCTGCAGAACTaGCACCAAGGTCCCGGGAAA +
Preference number: 4 (lower is better)
Translates to: VGMEQNHVCGSCPLSRSPLWLQN*HQGPGK
Trigger: TTTCCCGGGACCTTGGTGGCAGTTCTGCAGCCACAG...AGGGCTTCGGGAAAGTGGACAAGAGCCACACACGTGATTCTGTTCCATGCCGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR GCA 90 bp CAAACGGGAGAGTTTCCTGCCAATGTGCAAATCCGTCAATACTCCCTGAGCCATGTCTGTGGCCTGCTGTaGAGGGTGACCGAGGCGCGA +
Preference number: 4 (lower is better)
Translates to: QTGEFPANVQIRQYSLSHVCGLL*RVTEAR
Trigger: TCGCGCCTCGGTCACCCTGCACAGCAGGCCACAGAC...ATGGCTCAGGGAGTATTGACGGATTTGCACATTGGCAGGAAACTCTCCCGTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR GCA 90 bp GTCGGCATGGAACAGAATCACGTGTGTGGCTCTTGTCCACTTTCCCGAAGCCCTGTCCATCTGTCAGCCTaGTGTGGTCACAGGTCTCCG +
Preference number: 4 (lower is better)
Translates to: VGMEQNHVCGSCPLSRSPVHLSA*CGHRSP
Trigger: CGGAGACCTGTGACCACAGCAGGCTGACAGATGGAC...AGGGCTTCGGGAAAGTGGACAAGAGCCACACACGTGATTCTGTTCCATGCCGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR GCA 90 bp CCCCATCGCTGGAGAGCTTGCAGCGCTAGATTTTCAATGACGCCACATGGAGAAGCCACTTGGGACACCTaGCCATCAGGGTGGCATGTC +
Preference number: 4 (lower is better)
Translates to: PHRWRACSARFSMTPHGEATWDT*PSGWHV
Trigger: GACATGCCACCCTGATGGGCAGGTGTCCCAAGTGGC...TTCTCCATGTGGCGTCATTGAAAATCTAGCGCTGCAAGCTCTCCAGCGATGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505140.1
CDS-3UTR CCA 90 bp CAAGTCCTGCCAAATCAGCTCCATTGTGGTGGCCTGAGTGTGGCATTGCTTCCTGGACAGGAGAGTCTGTaGCCTGCTGTGCAGGGTGAC +
Preference number: 4 (lower is better)
Translates to: QVLPNQLHCGGLSVALLPGQESL*PAVQGD
Trigger: GTCACCCTGCACAGCAGGCCACAGACTCTCCTGTCC...AGGAAGCAATGCCACACTCAGGCCACCACAATGGAGCTGATTTGGCAGGACTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CCA 90 bp TCAGCACTGGGTACCCAGGAATGTGAATGCAACCCTGGCATGTTCACAGCTAACCGCTGCGACGCATCCTaGCGTCTGGAGAACTCAGCC +
Preference number: 4 (lower is better)
Translates to: SALGTQECECNPGMFTANRCDAS*RLENSA
Trigger: GGCTGAGTTCTCCAGACGCCAGGATGCGTCGCAGCG...GTTAGCTGTGAACATGCCAGGGTTGCATTCACATTCCTGGGTACCCAGTGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR TCA 90 bp ACTCCGTGGCGGAAGGGAAATTTAAGAGGCCACCGGGGCTCCATCTCTTTGTACAAGTGTCATCCTGACTaGCTGTCCCTGCAGTGCCCA +
Preference number: 4 (lower is better)
Translates to: TPWRKGNLRGHRGSISLYKCHPD*LSLQCP
Trigger: TGGGCACTGCAGGGACAGTCAGTCAGGATGACACTT...GTACAAAGAGATGGAGCCCCGGTGGCCTCTTAAATTTCCCTTCCGCCACGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR GCA 90 bp TCAGCACTGGGTACCCAGGAATGTGAATGCAACCCTGGCATGTTCACAGCTAACAGCCACCCGGTGAGATaGGCCCTCACTGTGACTGGA +
Preference number: 4 (lower is better)
Translates to: SALGTQECECNPGMFTANSHPVR*ALTVTG
Trigger: TCCAGTCACAGTGAGGGCGCATCTCACCGGGTGGCT...GTTAGCTGTGAACATGCCAGGGTTGCATTCACATTCCTGGGTACCCAGTGCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CCA 90 bp ACTCCGTGGCGGAAGGGAAATTTAAGAGGCCACCGGGGCTCCATCTCTTTGTACGTCCCTGCATGTTCATaGCCCCACACTTCAGGGAAC +
Preference number: 4 (lower is better)
Translates to: TPWRKGNLRGHRGSISLYVPACS*PHTSGN
Trigger: GTTCCCTGAAGTGTGGGGCCATGAACATGCAGGGAC...GTACAAAGAGATGGAGCCCCGGTGGCCTCTTAAATTTCCCTTCCGCCACGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CCA 90 bp GCTGTGGGGTGCTGGGTGATTGGTGTTGATGTGTACCCTGTACTCCTTTGTTACCCACTGCAAGGCTTGTaGATGTGGCAGCCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: AVGCWVIGVDVYPVLLCYPLQGL*MWQPWG
Trigger: ACCCCAGGGCTGCCACATCCACAAGCCTTGCAGTGG...GTAACAAAGGAGTACAGGGTACACATCAACACCAATCACCCAGCACCCCACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CCA 90 bp AAGACAGTACCACAATACAGGAGTGCCGCTCGTCACACGCTCTGGCCACTTGGGAACCTGAGGCTGCATTaGCCTTTGTACTCCCGTGCT +
Preference number: 4 (lower is better)
Translates to: KTVPQYRSAARHTLWPLGNLRLH*PLYSRA
Trigger: AGCACGGGAGTACAAAGGCCAATGCAGCCTCAGGTT...CCCAAGTGGCCAGAGCGTGTGACGAGCGGCACTCCTGTATTGTGGTACTGTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505140.1
3UTR CAA 72 bp ATGGCACAGCTGCAGTCCTTTGGTTCCAAGAGGAGATaGTCCAGGGGAGGAGGACACAACGTCAACCGTGAG +
Preference number: 4 (lower is better)
Translates to: MAQLQSFGSKRR*SRGGGHNVNRE
Trigger: CTCACGGTTGACGTTGTGTCCTCCTCCCCTGGACAATCTCCTCTTGGAACCAAAGGACTGCAGCTGTGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR TCA 90 bp TGTCCACTTTCCCGAAGCCCTTTGATTAACTCCTTGGCCCTACTAGCTTTAGACGGGGCCAGTAGTGCGTaGGCGCCGGGAATTTCACCA +
Preference number: 4 (lower is better)
Translates to: CPLSRSPLINSLALLALDGASSA*APGISP
Trigger: TGGTGAAATTCCCGGCGCTCACGCACTACTGGCCCC...GTCTAAAGCTAGTAGGGCCAAGGAGTTAATCAAAGGGCTTCGGGAAAGTGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR TCA 90 bp GCTGTGGGGTGCTGGGTGATTGGTGTTGATGTGTACCCTGTACTCCTTTGTTACCGATGGCTATGTTGGTaGTGCCCAGGGGCACCAAGA +
Preference number: 4 (lower is better)
Translates to: AVGCWVIGVDVYPVLLCYRWLCW*CPGAPR
Trigger: TCTTGGTGCCCCTGGGCATCACCAACATAGCCATCG...GTAACAAAGGAGTACAGGGTACACATCAACACCAATCACCCAGCACCCCACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR TCA 90 bp GCTGTGGGGTGCTGGGTGATTGGTGTTGATGTGTACCCTGTACTCCTTTGTTACCAGCCGTATGGCATGTaGCCCACAGGGTATGTGGCT +
Preference number: 4 (lower is better)
Translates to: AVGCWVIGVDVYPVLLCYQPYGM*PTGYVA
Trigger: AGCCACATACCCTGTGGGTCACATGCCATACGGCTG...GTAACAAAGGAGTACAGGGTACACATCAACACCAATCACCCAGCACCCCACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR TCA 90 bp TCAGCACTGGGTACCCAGGAATGTGAATGCAACCCTGGCATGTTCACAGCTAACGATGCGCCCTCACTGTaGCTGGAACTGGGAAGAAGG +
Preference number: 4 (lower is better)
Translates to: SALGTQECECNPGMFTANDAPSL*LELGRR
Trigger: CCTTCTTCCCAGTTCCAGTCACAGTGAGGGCGCATC...GTTAGCTGTGAACATGCCAGGGTTGCATTCACATTCCTGGGTACCCAGTGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR TCA 90 bp GTCGGCATGGAACAGAATCACGTGTGTGGCTCTTGTCCACTTTCCCGAAGCCCTGACGCCCTTTGCCACTaGGATCCCTGTAAGTCACTA +
Preference number: 4 (lower is better)
Translates to: VGMEQNHVCGSCPLSRSPDALCH*DPCKSL
Trigger: TAGTGACTTACAGGGATCTCAGTGGCAAAGGGCGTC...AGGGCTTCGGGAAAGTGGACAAGAGCCACACACGTGATTCTGTTCCATGCCGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR TCA 90 bp CAAACGGGAGAGTTTCCTGCCAATGTGCAAATCCGTCAATACTCCCTGAGCCATTGCTGCACGGTGACATaGCCATCGCTGTGGGGTGCT +
Preference number: 4 (lower is better)
Translates to: QTGEFPANVQIRQYSLSHCCTVT*PSLWGA
Trigger: AGCACCCCACAGCGATGGTCATGTCACCGTGCAGCA...ATGGCTCAGGGAGTATTGACGGATTTGCACATTGGCAGGAAACTCTCCCGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR TCA 90 bp ACAGTACCACAATACAGGAGTGCCGCTCGTCACACGCTCTGGCCACTTGGGACAGCTGGAAAAGTCTGCTaGATAATTGAGGGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: TVPQYRSAARHTLWPLGTAGKVC*IIEGRE
Trigger: CTCCCTCCCCTCAATTATTCAGCAGACTTTTCCAGC...TGTCCCAAGTGGCCAGAGCGTGTGACGAGCGGCACTCCTGTATTGTGGTACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505140.1
CDS-3UTR GCA 90 bp TCAGCACTGGGTACCCAGGAATGTGAATGCAACCCTGGCATGTTCACAGCTAACGGCCAGCATCTCGACTaGATCCTCCTTGACAGCAGC +
Preference number: 4 (lower is better)
Translates to: SALGTQECECNPGMFTANGQHLD*ILLDSS
Trigger: GCTGCTGTCAAGGAGGATGCAGTCGAGATGCTGGCC...GTTAGCTGTGAACATGCCAGGGTTGCATTCACATTCCTGGGTACCCAGTGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR GCA 90 bp ATCGCTGTGGGGTGCTGGGTGATTGGTGTTGATGTGTACCCTGTACTCCTTTGTGGTGCAGCGCACAAGTaGGCCCATGTACAAGGAGAG +
Preference number: 4 (lower is better)
Translates to: IAVGCWVIGVDVYPVLLCGAAHK*AHVQGE
Trigger: CTCTCCTTGTACATGGGCGCACTTGTGCGCTGCACC...ACAAAGGAGTACAGGGTACACATCAACACCAATCACCCAGCACCCCACAGCGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR GCA 90 bp CAAGTCCTGCCAAATCAGCTCCATTGTGGTGGCCTGAGTGTGGCATTGCTTCCTGCGCGATGGCACAGCTaGAGTCCTTTGGTTCCAAGA +
Preference number: 4 (lower is better)
Translates to: QVLPNQLHCGGLSVALLPARWHS*SPLVPR
Trigger: TCTTGGAACCAAAGGACTGCAGCTGTGCCATCGCGC...AGGAAGCAATGCCACACTCAGGCCACCACAATGGAGCTGATTTGGCAGGACTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR GCA 90 bp CTATCATTCAACCATGTCAGTTTGCTGCCCCCGGGGCATTTCAAACCAAACCTTTCACCCAGGCTGGAGTaGGATGGCGCGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: LSFNHVSLLPPGHFKPNLSPRLE*DGAISA
Trigger: AGCCGAGATCGCGCCATCGCACTCCAGCCTGGGTGA...AAGGTTTGGTTTGAAATGCCCCGGGGGCAGCAAACTGACATGGTTGAATGATAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR GCA 90 bp CAAGTCCTGCCAAATCAGCTCCATTGTGGTGGCCTGAGTGTGGCATTGCTTCCTGCGATGTCTACAGAATaGAGGCAGGAGCTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: QVLPNQLHCGGLSVALLPAMSTE*RQELLA
Trigger: AGCCAGCAGCTCCTGCCTGCATTCTGTAGACATCGC...AGGAAGCAATGCCACACTCAGGCCACCACAATGGAGCTGATTTGGCAGGACTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CCA 90 bp ATCGCTGTGGGGTGCTGGGTGATTGGTGTTGATGTGTACCCTGTACTCCTTTGTTCCCTGCAGTGCCCATaGCGTCCCGTGCCTTATTCA +
Preference number: 4 (lower is better)
Translates to: IAVGCWVIGVDVYPVLLCSLQCP*RPVPYS
Trigger: TGAATAAGGCACGGGACGCCATGGGCACTGCAGGGA...ACAAAGGAGTACAGGGTACACATCAACACCAATCACCCAGCACCCCACAGCGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CCA 90 bp ACTCCGTGGCGGAAGGGAAATTTAAGAGGCCACCGGGGCTCCATCTCTTTGTACCATGTGTGGAGTAGATaGTTTCGAACTCCGTGGCGG +
Preference number: 4 (lower is better)
Translates to: TPWRKGNLRGHRGSISLYHVWSR*FRTPWR
Trigger: CCGCCACGGAGTTCGAAACCATCTACTCCACACATG...GTACAAAGAGATGGAGCCCCGGTGGCCTCTTAAATTTCCCTTCCGCCACGGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CCA 90 bp GCTTATCAGGACACATTCGGGATACCCCTAATCCTTACCTGGACTACGAAACAAGCTGCATCCCGCTGGTaGCCCTGCCAAAACGGTCCC +
Preference number: 4 (lower is better)
Translates to: AYQDTFGIPLILTWTTKQAASRW*PCQNGP
Trigger: GGGACCGTTTTGGCAGGGCCACCAGCGGGATGCAGC...TTGTTTCGTAGTCCAGGTAAGGATTAGGGGTATCCCGAATGTGTCCTGATAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505140.1
CDS-3UTR TCA 90 bp GCTTATCAGGACACATTCGGGATACCCCTAATCCTTACCTGGACTACGAAACAAGGGGCCAGTAGTGCGTaGGCGCCGGGAATTTCACCA +
Preference number: 4 (lower is better)
Translates to: AYQDTFGIPLILTWTTKQGASSA*APGISP
Trigger: TGGTGAAATTCCCGGCGCTCACGCACTACTGGCCCC...TTGTTTCGTAGTCCAGGTAAGGATTAGGGGTATCCCGAATGTGTCCTGATAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505140.1
CDS-3UTR TCA 90 bp ACTCCGTGGCGGAAGGGAAATTTAAGAGGCCACCGGGGCTCCATCTCTTTGTACTTAGGATGCTCCATGTaGCTCGCTCTAATGCGACCT +
Preference number: 4 (lower is better)
Translates to: TPWRKGNLRGHRGSISLYLGCSM*LALMRP
Trigger: AGGTCGCATTAGAGCGAGTCACATGGAGCATCCTAA...GTACAAAGAGATGGAGCCCCGGTGGCCTCTTAAATTTCCCTTCCGCCACGGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR TCA 90 bp ATCGCTGTGGGGTGCTGGGTGATTGGTGTTGATGTGTACCCTGTACTCCTTTGTTCCATTGTGGTGGCCTaGGTGTGGCATTGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: IAVGCWVIGVDVYPVLLCSIVVA*VWHCFL
Trigger: CAGGAAGCAATGCCACACTCAGGCCACCACAATGGA...ACAAAGGAGTACAGGGTACACATCAACACCAATCACCCAGCACCCCACAGCGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR TCA 90 bp ATCGCTGTGGGGTGCTGGGTGATTGGTGTTGATGTGTACCCTGTACTCCTTTGTGGTCCAATCCTACCGTaGCTTTCCAAGCGCAAGCCT +
Preference number: 4 (lower is better)
Translates to: IAVGCWVIGVDVYPVLLCGPILP*LSKRKP
Trigger: AGGCTTGCGCTTGGAAAGTCACGGTAGGATTGGACC...ACAAAGGAGTACAGGGTACACATCAACACCAATCACCCAGCACCCCACAGCGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR GCA 90 bp GTCGGCATGGAACAGAATCACGTGTGTGGCTCTTGTCCACTTTCCCGAAGCCCTATGGGTCCATGCCATTaGGTCCATGAAAGGAAAGGC +
Preference number: 4 (lower is better)
Translates to: VGMEQNHVCGSCPLSRSPMGPCH*VHERKG
Trigger: GCCTTTCCTTTCATGGACGCAATGGCATGGACCCAT...AGGGCTTCGGGAAAGTGGACAAGAGCCACACACGTGATTCTGTTCCATGCCGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR GCA 90 bp CAAACGGGAGAGTTTCCTGCCAATGTGCAAATCCGTCAATACTCCCTGAGCCATCACTGCCTCTGTGGCTaGAGAACTGCCACCAAGGTC +
Preference number: 4 (lower is better)
Translates to: QTGEFPANVQIRQYSLSHHCLCG*RTATKV
Trigger: GACCTTGGTGGCAGTTCTGCAGCCACAGAGGCAGTG...ATGGCTCAGGGAGTATTGACGGATTTGCACATTGGCAGGAAACTCTCCCGTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR GCA 90 bp ACTCCGTGGCGGAAGGGAAATTTAAGAGGCCACCGGGGCTCCATCTCTTTGTACGGGGTTTTGCTCTGTTaGTCAGGCTGGATTCCAACT +
Preference number: 4 (lower is better)
Translates to: TPWRKGNLRGHRGSISLYGVLLC*SGWIPT
Trigger: AGTTGGAATCCAGCCTGAGCAACAGAGCAAAACCCC...GTACAAAGAGATGGAGCCCCGGTGGCCTCTTAAATTTCCCTTCCGCCACGGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR GCA 90 bp AAGACAGTACCACAATACAGGAGTGCCGCTCGTCACACGCTCTGGCCACTTGGGTCACCCTTGACAAGCTaGACACCCGACCAAATGTTT +
Preference number: 4 (lower is better)
Translates to: KTVPQYRSAARHTLWPLGSPLTS*TPDQMF
Trigger: AAACATTTGGTCGGGTGTGCAGCTTGTCAAGGGTGA...CCCAAGTGGCCAGAGCGTGTGACGAGCGGCACTCCTGTATTGTGGTACTGTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505140.1
CDS-3UTR CCA 90 bp TGTCCACTTTCCCGAAGCCCTTTGATTAACTCCTTGGCCCTACTAGCTTTAGACACGCCAGCCCGTAGCTaGCCAGCATCTCGACTGCAT +
Preference number: 4 (lower is better)
Translates to: CPLSRSPLINSLALLALDTPARS*PASRLH
Trigger: ATGCAGTCGAGATGCTGGCCAGCTACGGGCTGGCGT...GTCTAAAGCTAGTAGGGCCAAGGAGTTAATCAAAGGGCTTCGGGAAAGTGGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CCA 90 bp CTCATTAAATCCAAGGAGCAGCGTATTTGCCACTGCAAGGCTTGTGGATGTGGCTCCGCAGCACAGAGCTaGGGGCAAGGACGAAGGTTT +
Preference number: 4 (lower is better)
Translates to: LIKSKEQRICHCKACGCGSAAQS*GQGRRF
Trigger: AAACCTTCGTCCTTGCCCCCAGCTCTGTGCTGCGGA...GCCACATCCACAAGCCTTGCAGTGGCAAATACGCTGCTCCTTGGATTTAATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CCA 90 bp CTCATTAAATCCAAGGAGCAGCGTATTTGCCACTGCAAGGCTTGTGGATGTGGCCGATGGCGACCATGGTaGATTCTCCCACAAAGCCCG +
Preference number: 4 (lower is better)
Translates to: LIKSKEQRICHCKACGCGRWRPW*ILPQSP
Trigger: CGGGCTTTGTGGGAGAATCCACCATGGTCGCCATCG...GCCACATCCACAAGCCTTGCAGTGGCAAATACGCTGCTCCTTGGATTTAATGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CCA 90 bp TCAGCACTGGGTACCCAGGAATGTGAATGCAACCCTGGCATGTTCACAGCTAACCAGCGATGGCGACCATaGTGGATTCTCCCACAAAGC +
Preference number: 4 (lower is better)
Translates to: SALGTQECECNPGMFTANQRWRP*WILPQS
Trigger: GCTTTGTGGGAGAATCCACCATGGTCGCCATCGCTG...GTTAGCTGTGAACATGCCAGGGTTGCATTCACATTCCTGGGTACCCAGTGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CCA 90 bp CTATCATTCAACCATGTCAGTTTGCTGCCCCCGGGGCATTTCAAACCAAACCTTCAGGCTGGAGTGCGATaGCGCGATCTCGGCTCACTA +
Preference number: 4 (lower is better)
Translates to: LSFNHVSLLPPGHFKPNLQAGVR*RDLGSL
Trigger: TAGTGAGCCGAGATCGCGCCATCGCACTCCAGCCTG...AAGGTTTGGTTTGAAATGCCCCGGGGGCAGCAAACTGACATGGTTGAATGATAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CCA 90 bp ACTCCGTGGCGGAAGGGAAATTTAAGAGGCCACCGGGGCTCCATCTCTTTGTACACAGAATCACGTGTGTaGCTCTTGTCCACTTTCCCG +
Preference number: 4 (lower is better)
Translates to: TPWRKGNLRGHRGSISLYTESRV*LLSTFP
Trigger: CGGGAAAGTGGACAAGAGCCACACACGTGATTCTGT...GTACAAAGAGATGGAGCCCCGGTGGCCTCTTAAATTTCCCTTCCGCCACGGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CCA 90 bp GCTTATCAGGACACATTCGGGATACCCCTAATCCTTACCTGGACTACGAAACAAGCTCGTCACACGCTCTaGCCACTTGGGACACCTGCC +
Preference number: 4 (lower is better)
Translates to: AYQDTFGIPLILTWTTKQARHTL*PLGTPA
Trigger: GGCAGGTGTCCCAAGTGGCCAGAGCGTGTGACGAGC...TTGTTTCGTAGTCCAGGTAAGGATTAGGGGTATCCCGAATGTGTCCTGATAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505140.1
CDS-3UTR TCA 90 bp ATCGCTGTGGGGTGCTGGGTGATTGGTGTTGATGTGTACCCTGTACTCCTTTGTGGCAGAAGGTTCTGCTaGCAGCGGCTCCATTATAAG +
Preference number: 4 (lower is better)
Translates to: IAVGCWVIGVDVYPVLLCGRRFC*QRLHYK
Trigger: CTTATAATGGAGCCGCTGTCAGCAGAACCTTCTGCC...ACAAAGGAGTACAGGGTACACATCAACACCAATCACCCAGCACCCCACAGCGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR TCA 90 bp GCTGTGGGGTGCTGGGTGATTGGTGTTGATGTGTACCCTGTACTCCTTTGTTACTCACGAAACAGAGCGTaGGTGACAGAGCCATGCAGA +
Preference number: 4 (lower is better)
Translates to: AVGCWVIGVDVYPVLLCYSRNRA*VTEPCR
Trigger: TCTGCATGGCTCTGTCACTCACGCTCTGTTTCGTGA...GTAACAAAGGAGTACAGGGTACACATCAACACCAATCACCCAGCACCCCACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR TCA 90 bp TCAGCACTGGGTACCCAGGAATGTGAATGCAACCCTGGCATGTTCACAGCTAACACACAACGTCAACCGTaGGGCAGCTGTGTCTTTTGG +
Preference number: 4 (lower is better)
Translates to: SALGTQECECNPGMFTANTQRQP*GSCVFW
Trigger: CCAAAAGACACAGCTGCCTCACGGTTGACGTTGTGT...GTTAGCTGTGAACATGCCAGGGTTGCATTCACATTCCTGGGTACCCAGTGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR TCA 90 bp GTCGGCATGGAACAGAATCACGTGTGTGGCTCTTGTCCACTTTCCCGAAGCCCTCTTTGTACGGCCATGTaGCTGGGAAGCAAATCAAAG +
Preference number: 4 (lower is better)
Translates to: VGMEQNHVCGSCPLSRSPLCTAM*LGSKSK
Trigger: CTTTGATTTGCTTCCCAGTCACATGGCCGTACAAAG...AGGGCTTCGGGAAAGTGGACAAGAGCCACACACGTGATTCTGTTCCATGCCGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR TCA 90 bp CTCATTAAATCCAAGGAGCAGCGTATTTGCCACTGCAAGGCTTGTGGATGTGGCACTCCTGACCTTAAGTaGTCCACCCTCCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: LIKSKEQRICHCKACGCGTPDLK*STLLGL
Trigger: GAGGCCAAGGAGGGTGGATCACTTAAGGTCAGGAGT...GCCACATCCACAAGCCTTGCAGTGGCAAATACGCTGCTCCTTGGATTTAATGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR TCA 90 bp TCAGCACTGGGTACCCAGGAATGTGAATGCAACCCTGGCATGTTCACAGCTAACCAGTTGTTGTCTCACTaGCGCCCTTTGCCACTGAGA +
Preference number: 4 (lower is better)
Translates to: SALGTQECECNPGMFTANQLLSH*RPLPLR
Trigger: TCTCAGTGGCAAAGGGCGTCAGTGAGACAACAACTG...GTTAGCTGTGAACATGCCAGGGTTGCATTCACATTCCTGGGTACCCAGTGCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR GCA 90 bp GCTGTGGGGTGCTGGGTGATTGGTGTTGATGTGTACCCTGTACTCCTTTGTTACCCACCATGCCCGGCCTaGTTTCTCAGTTTGGATCTT +
Preference number: 4 (lower is better)
Translates to: AVGCWVIGVDVYPVLLCYPPCPA*FLSLDL
Trigger: AAGATCCAAACTGAGAAAGCAGGCCGGGCATGGTGG...GTAACAAAGGAGTACAGGGTACACATCAACACCAATCACCCAGCACCCCACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR GCA 90 bp ACTCCGTGGCGGAAGGGAAATTTAAGAGGCCACCGGGGCTCCATCTCTTTGTACAACGGGAGAGTTTCCTaGCAATGTGCAAATCCGTCA +
Preference number: 4 (lower is better)
Translates to: TPWRKGNLRGHRGSISLYNGRVS*QCANPS
Trigger: TGACGGATTTGCACATTGGCAGGAAACTCTCCCGTT...GTACAAAGAGATGGAGCCCCGGTGGCCTCTTAAATTTCCCTTCCGCCACGGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR GCA 90 bp ACTCCGTGGCGGAAGGGAAATTTAAGAGGCCACCGGGGCTCCATCTCTTTGTACCGGCTGAATGTGCAATaGAGACATCTCAACACTCCA +
Preference number: 4 (lower is better)
Translates to: TPWRKGNLRGHRGSISLYRLNVQ*RHLNTP
Trigger: TGGAGTGTTGAGATGTCTGCATTGCACATTCAGCCG...GTACAAAGAGATGGAGCCCCGGTGGCCTCTTAAATTTCCCTTCCGCCACGGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR GCA 90 bp AGGGTGCCAATGCCCCATCGCTGGAGAGCTTGCAGCGCTAGATTTTCAATGACGCATCGCTGGAGAGCTTaGAGCGCTAGATTTTCAATG +
Preference number: 4 (lower is better)
Translates to: RVPMPHRWRACSARFSMTHRWRA*SARFSM
Trigger: CATTGAAAATCTAGCGCTGCAAGCTCTCCAGCGATG...CGTCATTGAAAATCTAGCGCTGCAAGCTCTCCAGCGATGGGGCATTGGCACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000505140.1
CDS-3UTR GCA 90 bp CTGGGAAATCAACTTGGACGCATTATAAAACAGAATCTCCCCACCGTCACCATTGCCTTAGAACGCAGCTaGATCCCGCTGGTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: LGNQLGRIIKQNLPTVTIALERS*IPLVAL
Trigger: CAGGGCCACCAGCGGGATGCAGCTGCGTTCTAAGGC...AATGGTGACGGTGGGGAGATTCTGTTTTATAATGCGTCCAAGTTGATTTCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505140.1
CDS-3UTR CCA 90 bp GTCGGCATGGAACAGAATCACGTGTGTGGCTCTTGTCCACTTTCCCGAAGCCCTACAGCTGCAGTCCTTTaGTTCCAAGAGGAGATTGTC +
Preference number: 4 (lower is better)
Translates to: VGMEQNHVCGSCPLSRSPTAAVL*FQEEIV
Trigger: GACAATCTCCTCTTGGAACCAAAGGACTGCAGCTGT...AGGGCTTCGGGAAAGTGGACAAGAGCCACACACGTGATTCTGTTCCATGCCGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CCA 90 bp TGTCCACTTTCCCGAAGCCCTTTGATTAACTCCTTGGCCCTACTAGCTTTAGACTCTTGTCACCCAGGCTaGAGTGCGATGGCGCGATCT +
Preference number: 4 (lower is better)
Translates to: CPLSRSPLINSLALLALDSCHPG*SAMARS
Trigger: AGATCGCGCCATCGCACTCCAGCCTGGGTGACAAGA...GTCTAAAGCTAGTAGGGCCAAGGAGTTAATCAAAGGGCTTCGGGAAAGTGGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CCA 90 bp ATCGCTGTGGGGTGCTGGGTGATTGGTGTTGATGTGTACCCTGTACTCCTTTGTTCAGCTCCATTGTGGTaGCCTGAGTGTGGCATTGCT +
Preference number: 4 (lower is better)
Translates to: IAVGCWVIGVDVYPVLLCSAPLW*PECGIA
Trigger: AGCAATGCCACACTCAGGCCACCACAATGGAGCTGA...ACAAAGGAGTACAGGGTACACATCAACACCAATCACCCAGCACCCCACAGCGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CCA 90 bp AGAAACGCAGGAGAATATGCCAGTTCTCAGTTTTGCCTCAAAGTTGTTAGGCTGACTCTGTCACTACCCTaGGAGCTCCCAGGCCTCCCC +
Preference number: 4 (lower is better)
Translates to: RNAGEYASSQFCLKVVRLTLSLP*ELPGLP
Trigger: GGGGAGGCCTGGGAGCTCCCAGGGTAGTGACAGAGT...CAGCCTAACAACTTTGAGGCAAAACTGAGAACTGGCATATTCTCCTGCGTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CCA 90 bp CAAACGGGAGAGTTTCCTGCCAATGTGCAAATCCGTCAATACTCCCTGAGCCATACGCATCCTGGCGTCTaGAGAACTCAGCCCAACTCT +
Preference number: 4 (lower is better)
Translates to: QTGEFPANVQIRQYSLSHTHPGV*RTQPNS
Trigger: AGAGTTGGGCTGAGTTCTCCAGACGCCAGGATGCGT...ATGGCTCAGGGAGTATTGACGGATTTGCACATTGGCAGGAAACTCTCCCGTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CCA 90 bp GCTTATCAGGACACATTCGGGATACCCCTAATCCTTACCTGGACTACGAAACAAACCTGCCCATCAGGGTaGCATGTCACTGCCTCCCCA +
Preference number: 4 (lower is better)
Translates to: AYQDTFGIPLILTWTTKQTCPSG*HVTASP
Trigger: TGGGGAGGCAGTGACATGCCACCCTGATGGGCAGGT...TTGTTTCGTAGTCCAGGTAAGGATTAGGGGTATCCCGAATGTGTCCTGATAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505140.1
CDS-3UTR TCA 90 bp CTATCATTCAACCATGTCAGTTTGCTGCCCCCGGGGCATTTCAAACCAAACCTTATGCCATTGCGTCCATaGAAGGAAAGGCGGCGAGGT +
Preference number: 4 (lower is better)
Translates to: LSFNHVSLLPPGHFKPNLMPLRP*KERRRG
Trigger: ACCTCGCCGCCTTTCCTTTCATGGACGCAATGGCAT...AAGGTTTGGTTTGAAATGCCCCGGGGGCAGCAAACTGACATGGTTGAATGATAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR TCA 90 bp CTCATTAAATCCAAGGAGCAGCGTATTTGCCACTGCAAGGCTTGTGGATGTGGCGAAACAGAGCGTGAGTaGCAGAGCCATGCAGACGAA +
Preference number: 4 (lower is better)
Translates to: LIKSKEQRICHCKACGCGETERE*QSHADE
Trigger: TTCGTCTGCATGGCTCTGTCACTCACGCTCTGTTTC...GCCACATCCACAAGCCTTGCAGTGGCAAATACGCTGCTCCTTGGATTTAATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR TCA 90 bp AACTGCAGGTATGTTGAGCACACAAGCAATCACCGTATTGTATTAGAGACATTTGCCTGCTGTGCAGGGTaGCCGAGGCGCGATGGCACA +
Preference number: 4 (lower is better)
Translates to: NCRYVEHTSNHRIVLETFACCAG*PRRDGT
Trigger: TGTGCCATCGCGCCTCGGTCACCCTGCACAGCAGGC...AAATGTCTCTAATACAATACGGTGATTGCTTGTGTGCTCAACATACCTGCAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR TCA 90 bp GTCGGCATGGAACAGAATCACGTGTGTGGCTCTTGTCCACTTTCCCGAAGCCCTTGTACCGCAGAGTTATaGCTAAGGATAGCAGAACCA +
Preference number: 4 (lower is better)
Translates to: VGMEQNHVCGSCPLSRSPCTAEL*LRIAEP
Trigger: TGGTTCTGCTATCCTTAGTCATAACTCTGCGGTACA...AGGGCTTCGGGAAAGTGGACAAGAGCCACACACGTGATTCTGTTCCATGCCGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR TCA 90 bp ATCGCTGTGGGGTGCTGGGTGATTGGTGTTGATGTGTACCCTGTACTCCTTTGTCAACTGCAGGTATGTTaGGCACACAAGCAATCACCG +
Preference number: 4 (lower is better)
Translates to: IAVGCWVIGVDVYPVLLCQLQVC*AHKQSP
Trigger: CGGTGATTGCTTGTGTGCTCAACATACCTGCAGTTG...ACAAAGGAGTACAGGGTACACATCAACACCAATCACCCAGCACCCCACAGCGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR TCA 90 bp CAAGTCCTGCCAAATCAGCTCCATTGTGGTGGCCTGAGTGTGGCATTGCTTCCTACTGCACATTTAGGATaGCGTCCCTTGTGCTACTCA +
Preference number: 4 (lower is better)
Translates to: QVLPNQLHCGGLSVALLPTAHLG*RPLCYS
Trigger: TGAGTAGCACAAGGGACGTCATCCTAAATGTGCAGT...AGGAAGCAATGCCACACTCAGGCCACCACAATGGAGCTGATTTGGCAGGACTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR TCA 90 bp GCTGTGGGGTGCTGGGTGATTGGTGTTGATGTGTACCCTGTACTCCTTTGTTACCTGGGTGATTGGTGTTaGTGTGTACCCTGTACTCCT +
Preference number: 4 (lower is better)
Translates to: AVGCWVIGVDVYPVLLCYLGDWC*CVPCTP
Trigger: AGGAGTACAGGGTACACATCAACACCAATCACCCAG...GTAACAAAGGAGTACAGGGTACACATCAACACCAATCACCCAGCACCCCACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR TCA 90 bp CCAATGCCCCATCGCTGGAGAGCTTGCAGCGCTAGATTTTCAATGACGCCACATAAACCCTTCCATAGGTaGAGCTTCACACCATCCAGT +
Preference number: 4 (lower is better)
Translates to: PMPHRWRACSARFSMTPHKPFHR*SFTPSS
Trigger: ACTGGATGGTGTGAAGCTTCACCTATGGAAGGGTTT...ATGTGGCGTCATTGAAAATCTAGCGCTGCAAGCTCTCCAGCGATGGGGCATTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505140.1
CDS-3UTR GCA 90 bp GCTGTGGGGTGCTGGGTGATTGGTGTTGATGTGTACCCTGTACTCCTTTGTTACTGGTCCTGTCTCTCTTaGTGTTCACAAACACCAGGC +
Preference number: 4 (lower is better)
Translates to: AVGCWVIGVDVYPVLLCYWSCLS*CSQTPG
Trigger: GCCTGGTGTTTGTGAACAGCAAGAGAGACAGGACCA...GTAACAAAGGAGTACAGGGTACACATCAACACCAATCACCCAGCACCCCACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR GCA 90 bp AGAAACGCAGGAGAATATGCCAGTTCTCAGTTTTGCCTCAAAGTTGTTAGGCTGAGGCCCTTCTCGTCTTaGTCCCCACCGACTCGTCCA +
Preference number: 4 (lower is better)
Translates to: RNAGEYASSQFCLKVVRLRPFSS*SPPTRP
Trigger: TGGACGAGTCGGTGGGGAGCAAGACGAGAAGGGCCT...CAGCCTAACAACTTTGAGGCAAAACTGAGAACTGGCATATTCTCCTGCGTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR GCA 90 bp ACTCCGTGGCGGAAGGGAAATTTAAGAGGCCACCGGGGCTCCATCTCTTTGTACTGTGTTTTAAGAGAATaGCAGCATGGGTCCATGCCA +
Preference number: 4 (lower is better)
Translates to: TPWRKGNLRGHRGSISLYCVLRE*QHGSMP
Trigger: TGGCATGGACCCATGCTGGCATTCTCTTAAAACACA...GTACAAAGAGATGGAGCCCCGGTGGCCTCTTAAATTTCCCTTCCGCCACGGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR GCA 90 bp ACTCCGTGGCGGAAGGGAAATTTAAGAGGCCACCGGGGCTCCATCTCTTTGTACAACAACACAGAGTTCTaGAAAGGCAAAGTCCACTCC +
Preference number: 4 (lower is better)
Translates to: TPWRKGNLRGHRGSISLYNNTEF*KGKVHS
Trigger: GGAGTGGACTTTGCCTTTGCAGAACTCTGTGTTGTT...GTACAAAGAGATGGAGCCCCGGTGGCCTCTTAAATTTCCCTTCCGCCACGGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR GCA 90 bp CAAGTCCTGCCAAATCAGCTCCATTGTGGTGGCCTGAGTGTGGCATTGCTTCCTACCCAGGAATGTGAATaGAACCCTGGCATGTTCACA +
Preference number: 4 (lower is better)
Translates to: QVLPNQLHCGGLSVALLPTQECE*NPGMFT
Trigger: TGTGAACATGCCAGGGTTGCATTCACATTCCTGGGT...AGGAAGCAATGCCACACTCAGGCCACCACAATGGAGCTGATTTGGCAGGACTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR GCA 90 bp GCTGTGGGGTGCTGGGTGATTGGTGTTGATGTGTACCCTGTACTCCTTTGTTACTCAAGCAAATTCTCCTaGCTCAGCCTCCTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: AVGCWVIGVDVYPVLLCYSSKFS*LSLLSS
Trigger: GCTACTCAGGAGGCTGAGGCAGGAGAATTTGCTTGA...GTAACAAAGGAGTACAGGGTACACATCAACACCAATCACCCAGCACCCCACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR GCA 90 bp CAAACGGGAGAGTTTCCTGCCAATGTGCAAATCCGTCAATACTCCCTGAGCCATAAGTTACTCTCCCCCTaGCCCTTCCCTCCAGAAGAT +
Preference number: 4 (lower is better)
Translates to: QTGEFPANVQIRQYSLSHKLLSP*PFPPED
Trigger: ATCTTCTGGAGGGAAGGGGCAGGGGGAGAGTAACTT...ATGGCTCAGGGAGTATTGACGGATTTGCACATTGGCAGGAAACTCTCCCGTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR GCA 90 bp ATCGCTGTGGGGTGCTGGGTGATTGGTGTTGATGTGTACCCTGTACTCCTTTGTAAGGAGCAGCGTATTTaGCACTGCAAGGCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: IAVGCWVIGVDVYPVLLCKEQRI*HCKACG
Trigger: TCCACAAGCCTTGCAGTGGCAAATACGCTGCTCCTT...ACAAAGGAGTACAGGGTACACATCAACACCAATCACCCAGCACCCCACAGCGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR GCA 90 bp ATCATCTCAAAAGCACGTGAACCTGAGGCTGCATTGGCCTTTGTACTCCCGTGCAAAACGGTCCCCACATaGAAAGTGCAGGGTGCCAAT +
Preference number: 4 (lower is better)
Translates to: IISKAREPEAALAFVLPCKTVPT*KVQGAN
Trigger: ATTGGCACCCTGCACTTTGCATGTGGGGACCGTTTT...GCACGGGAGTACAAAGGCCAATGCAGCCTCAGGTTCACGTGCTTTTGAGATGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000505140.1
CDS-3UTR CCA 90 bp TGTCCACTTTCCCGAAGCCCTTTGATTAACTCCTTGGCCCTACTAGCTTTAGACCGTCAACCAGCCGTATaGCATGTGACCCACAGGGTA +
Preference number: 4 (lower is better)
Translates to: CPLSRSPLINSLALLALDRQPAV*HVTHRV
Trigger: TACCCTGTGGGTCACATGCCATACGGCTGGTTGACG...GTCTAAAGCTAGTAGGGCCAAGGAGTTAATCAAAGGGCTTCGGGAAAGTGGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CCA 90 bp TGTCCACTTTCCCGAAGCCCTTTGATTAACTCCTTGGCCCTACTAGCTTTAGACCATAGCACGCAGCGATaGCGACCATGGTGGATTCTC +
Preference number: 4 (lower is better)
Translates to: CPLSRSPLINSLALLALDHSTQR*RPWWIL
Trigger: GAGAATCCACCATGGTCGCCATCGCTGCGTGCTATG...GTCTAAAGCTAGTAGGGCCAAGGAGTTAATCAAAGGGCTTCGGGAAAGTGGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CCA 90 bp CTATCATTCAACCATGTCAGTTTGCTGCCCCCGGGGCATTTCAAACCAAACCTTGGCAGCTGTGTCTTTTaGGTTTTCGTGAGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: LSFNHVSLLPPGHFKPNLGSCVF*VFVRQG
Trigger: CCCCTGCCTCACGAAAACCCAAAAGACACAGCTGCC...AAGGTTTGGTTTGAAATGCCCCGGGGGCAGCAAACTGACATGGTTGAATGATAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CCA 90 bp ACTCCGTGGCGGAAGGGAAATTTAAGAGGCCACCGGGGCTCCATCTCTTTGTACTGGTTTCGAACTCCGTaGCGGAAGGGAAATTTAAGA +
Preference number: 4 (lower is better)
Translates to: TPWRKGNLRGHRGSISLYWFRTP*RKGNLR
Trigger: TCTTAAATTTCCCTTCCGCCACGGAGTTCGAAACCA...GTACAAAGAGATGGAGCCCCGGTGGCCTCTTAAATTTCCCTTCCGCCACGGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CCA 90 bp AGAAACGCAGGAGAATATGCCAGTTCTCAGTTTTGCCTCAAAGTTGTTAGGCTGGGACATGTCCCCACGTaGGCACACCCCATCAGCACT +
Preference number: 4 (lower is better)
Translates to: RNAGEYASSQFCLKVVRLGHVPT*AHPIST
Trigger: AGTGCTGATGGGGTGTGCCCACGTGGGGACATGTCC...CAGCCTAACAACTTTGAGGCAAAACTGAGAACTGGCATATTCTCCTGCGTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CCA 90 bp AGAAACGCAGGAGAATATGCCAGTTCTCAGTTTTGCCTCAAAGTTGTTAGGCTGTGGATGTGGCAGCCCTaGGGTAAGGGACCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: RNAGEYASSQFCLKVVRLWMWQP*GKGPAA
Trigger: TGCAGCAGGTCCCTTACCCCAGGGCTGCCACATCCA...CAGCCTAACAACTTTGAGGCAAAACTGAGAACTGGCATATTCTCCTGCGTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR GCA 90 bp GTCCTGGGCACTGTTCTGCTGGGAGTTACTGAAGTAGAAAGATTTTTAAATACATTCTCCGAGCGCGGCTaGTCTAGCAGGGGATCCGCA +
Preference number: 4 (lower is better)
Translates to: VLGTVLLGVTEVERFLNTFSERG*SSRGSA
Trigger: TGCGGATCCCCTGCTAGAGCAGCCGCGCTCGGAGAA...TGTATTTAAAAATCTTTCTACTTCAGTAACTCCCAGCAGAACAGTGCCCAGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR GCA 90 bp GTCCTGGGCACTGTTCTGCTGGGAGTTACTGAAGTAGAAAGATTTTTAAATACACTGACTGACTGTCCCTaGAGTGCCCATGGCGTCCCG +
Preference number: 4 (lower is better)
Translates to: VLGTVLLGVTEVERFLNTLTDCP*SAHGVP
Trigger: CGGGACGCCATGGGCACTGCAGGGACAGTCAGTCAG...TGTATTTAAAAATCTTTCTACTTCAGTAACTCCCAGCAGAACAGTGCCCAGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR GCA 90 bp GTACCTGGGAAATCAACTTGGACGCATTATAAAACAGAATCTCCCCACCGTCACTCCCCACATGCAAAGTaGAGGGTGCCAATGCCCCAT +
Preference number: 4 (lower is better)
Translates to: VPGKSTWTHYKTESPHRHSPHAK*RVPMPH
Trigger: ATGGGGCATTGGCACCCTGCACTTTGCATGTGGGGA...GTGACGGTGGGGAGATTCTGTTTTATAATGCGTCCAAGTTGATTTCCCAGGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000505140.1
CDS-3UTR GCA 90 bp GCTTATCAGGACACATTCGGGATACCCCTAATCCTTACCTGGACTACGAAACAAAGGGTGGCATGTCACTaGCTCCCCATCACCAAATCC +
Preference number: 4 (lower is better)
Translates to: AYQDTFGIPLILTWTTKQRVACH*LPITKS
Trigger: GGATTTGGTGATGGGGAGGCAGTGACATGCCACCCT...TTGTTTCGTAGTCCAGGTAAGGATTAGGGGTATCCCGAATGTGTCCTGATAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505140.1
CDS-3UTR GCA 90 bp ACAGTACCACAATACAGGAGTGCCGCTCGTCACACGCTCTGGCCACTTGGGACATCTCCGATTTGTAACTaGCTCCTGAAAGCTGTTTTA +
Preference number: 4 (lower is better)
Translates to: TVPQYRSAARHTLWPLGTSPICN*LLKAVL
Trigger: TAAAACAGCTTTCAGGAGGCAGTTACAAATCGGAGA...TGTCCCAAGTGGCCAGAGCGTGTGACGAGCGGCACTCCTGTATTGTGGTACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505140.1
CDS-3UTR CCA 90 bp ACTCCGTGGCGGAAGGGAAATTTAAGAGGCCACCGGGGCTCCATCTCTTTGTACTTTTCTCAGACACGTTaGGTGTCCAAAACATCACGA +
Preference number: 4 (lower is better)
Translates to: TPWRKGNLRGHRGSISLYFSQTR*VSKTSR
Trigger: TCGTGATGTTTTGGACACCCAACGTGTCTGAGAAAA...GTACAAAGAGATGGAGCCCCGGTGGCCTCTTAAATTTCCCTTCCGCCACGGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CCA 90 bp CTATCATTCAACCATGTCAGTTTGCTGCCCCCGGGGCATTTCAAACCAAACCTTCGCCCTCACTGTGACTaGAACTGGGAAGAAGGAGAA +
Preference number: 4 (lower is better)
Translates to: LSFNHVSLLPPGHFKPNLRPHCD*NWEEGE
Trigger: TTCTCCTTCTTCCCAGTTCCAGTCACAGTGAGGGCG...AAGGTTTGGTTTGAAATGCCCCGGGGGCAGCAAACTGACATGGTTGAATGATAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CCA 90 bp CAAGTCCTGCCAAATCAGCTCCATTGTGGTGGCCTGAGTGTGGCATTGCTTCCTGGGAACAAAATACGATaGGAGAGGGAAGAGATGATG +
Preference number: 4 (lower is better)
Translates to: QVLPNQLHCGGLSVALLPGNKIR*EREEMM
Trigger: CATCATCTCTTCCCTCTCCCATCGTATTTTGTTCCC...AGGAAGCAATGCCACACTCAGGCCACCACAATGGAGCTGATTTGGCAGGACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CCA 90 bp GCTGTGGGGTGCTGGGTGATTGGTGTTGATGTGTACCCTGTACTCCTTTGTTACGTACGGCCATGTGACTaGGAAGCAAATCAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: AVGCWVIGVDVYPVLLCYVRPCD*EANQRK
Trigger: CTTCCTTTGATTTGCTTCCCAGTCACATGGCCGTAC...GTAACAAAGGAGTACAGGGTACACATCAACACCAATCACCCAGCACCCCACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CCA 90 bp CAAACGGGAGAGTTTCCTGCCAATGTGCAAATCCGTCAATACTCCCTGAGCCATGCAGGGTCTGGAATCTaGAGATGCGCTTTTGTGACA +
Preference number: 4 (lower is better)
Translates to: QTGEFPANVQIRQYSLSHAGSGI*RCAFVT
Trigger: TGTCACAAAAGCGCATCTCCAGATTCCAGACCCTGC...ATGGCTCAGGGAGTATTGACGGATTTGCACATTGGCAGGAAACTCTCCCGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CCA 90 bp CAAGTCCTGCCAAATCAGCTCCATTGTGGTGGCCTGAGTGTGGCATTGCTTCCTCAGAAGATCCCCAAATaGGGAACAAGTAAGAGAGCA +
Preference number: 4 (lower is better)
Translates to: QVLPNQLHCGGLSVALLPQKIPK*GTSKRA
Trigger: TGCTCTCTTACTTGTTCCCCATTTGGGGATCTTCTG...AGGAAGCAATGCCACACTCAGGCCACCACAATGGAGCTGATTTGGCAGGACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CCA 90 bp CTATCATTCAACCATGTCAGTTTGCTGCCCCCGGGGCATTTCAAACCAAACCTTATCGCTGTGGGGTGCTaGGTGATTGGTGTTGATGTG +
Preference number: 4 (lower is better)
Translates to: LSFNHVSLLPPGHFKPNLIAVGC*VIGVDV
Trigger: CACATCAACACCAATCACCCAGCACCCCACAGCGAT...AAGGTTTGGTTTGAAATGCCCCGGGGGCAGCAAACTGACATGGTTGAATGATAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR CAA 72 bp AAGGGAAATTTAAGAGGCCACCGGGGCTCCATCTCTTaGTACGGCCATGTGACTGGGAAGCAAATCAAAGGA +
Preference number: 4 (lower is better)
Translates to: KGNLRGHRGSIS*YGHVTGKQIKG
Trigger: TCCTTTGATTTGCTTCCCAGTCACATGGCCGTACAAAGAGATGGAGCCCCGGTGGCCTCTTAAATTTCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR CAA 72 bp CACGTGTGTGGCTCTTGTCCACTTTCCCGAAGCCCTTaGATTAACTCCTTGGCCCTACTAGCTTTAGACAGT +
Preference number: 4 (lower is better)
Translates to: HVCGSCPLSRSP*INSLALLALDS
Trigger: ACTGTCTAAAGCTAGTAGGGCCAAGGAGTTAATCAAAGGGCTTCGGGAAAGTGGACAAGAGCCACACACGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR TCA 90 bp TCAGCACTGGGTACCCAGGAATGTGAATGCAACCCTGGCATGTTCACAGCTAACCACTTCTGTCAGGGATaGTGTCGTGAATGTTCTTGT +
Preference number: 4 (lower is better)
Translates to: SALGTQECECNPGMFTANHFCQG*CRECSC
Trigger: ACAAGAACATTCACGACATCATCCCTGACAGAAGTG...GTTAGCTGTGAACATGCCAGGGTTGCATTCACATTCCTGGGTACCCAGTGCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR TCA 90 bp GTCGGCATGGAACAGAATCACGTGTGTGGCTCTTGTCCACTTTCCCGAAGCCCTCGAGTTTTAACCTGTTaGTTCTTAAGAGCGATGAAG +
Preference number: 4 (lower is better)
Translates to: VGMEQNHVCGSCPLSRSPRVLTC*FLRAMK
Trigger: CTTCATCGCTCTTAAGAATCAACAGGTTAAAACTCG...AGGGCTTCGGGAAAGTGGACAAGAGCCACACACGTGATTCTGTTCCATGCCGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR TCA 90 bp GCTGTGGGGTGCTGGGTGATTGGTGTTGATGTGTACCCTGTACTCCTTTGTTACCTATTCCTACTCCAGTaGCCCATTTATTCCCCAGTT +
Preference number: 4 (lower is better)
Translates to: AVGCWVIGVDVYPVLLCYLFLLQ*PIYSPV
Trigger: AACTGGGGAATAAATGGGTCACTGGAGTAGGAATAG...GTAACAAAGGAGTACAGGGTACACATCAACACCAATCACCCAGCACCCCACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR TCA 90 bp CAAACGGGAGAGTTTCCTGCCAATGTGCAAATCCGTCAATACTCCCTGAGCCATTCTTTCCCTGGTCTTTaGCATGAGAATCTCACAGGC +
Preference number: 4 (lower is better)
Translates to: QTGEFPANVQIRQYSLSHSFPGL*HENLTG
Trigger: GCCTGTGAGATTCTCATGTCAAAGACCAGGGAAAGA...ATGGCTCAGGGAGTATTGACGGATTTGCACATTGGCAGGAAACTCTCCCGTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR TCA 90 bp CTATCATTCAACCATGTCAGTTTGCTGCCCCCGGGGCATTTCAAACCAAACCTTTCAGAGGACTGTGTGTaGGGGCGATGTCTACAGAAT +
Preference number: 4 (lower is better)
Translates to: LSFNHVSLLPPGHFKPNLSEDCV*GRCLQN
Trigger: ATTCTGTAGACATCGCCCTCACACACAGTCCTCTGA...AAGGTTTGGTTTGAAATGCCCCGGGGGCAGCAAACTGACATGGTTGAATGATAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR TCA 90 bp AACTGCAGGTATGTTGAGCACACAAGCAATCACCGTATTGTATTAGAGACATTTGGACCTGCTGCACGGTaGCATGACCATCGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: NCRYVEHTSNHRIVLETFGPAAR*HDHRCG
Trigger: CCCACAGCGATGGTCATGTCACCGTGCAGCAGGTCC...AAATGTCTCTAATACAATACGGTGATTGCTTGTGTGCTCAACATACCTGCAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR TCA 90 bp TGTCCACTTTCCCGAAGCCCTTTGATTAACTCCTTGGCCCTACTAGCTTTAGACTTTCCCGAAGCCCTTTaGTTAACTCCTTGGCCCTAC +
Preference number: 4 (lower is better)
Translates to: CPLSRSPLINSLALLALDFPEAL*LTPWPY
Trigger: GTAGGGCCAAGGAGTTAATCAAAGGGCTTCGGGAAA...GTCTAAAGCTAGTAGGGCCAAGGAGTTAATCAAAGGGCTTCGGGAAAGTGGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR GCA 90 bp AACTGCAGGTATGTTGAGCACACAAGCAATCACCGTATTGTATTAGAGACATTTGACCCCACACACATCTaGTGCCGCGAGGGGACTCTG +
Preference number: 4 (lower is better)
Translates to: NCRYVEHTSNHRIVLETFDPTHI*CREGTL
Trigger: CAGAGTCCCCTCGCGGCAGCAGATGTGTGTGGGGTC...AAATGTCTCTAATACAATACGGTGATTGCTTGTGTGCTCAACATACCTGCAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR GCA 90 bp TCAGCACTGGGTACCCAGGAATGTGAATGCAACCCTGGCATGTTCACAGCTAACTGCATGGATTTCGAATaGGTTATTTCAGGGAGGACC +
Preference number: 4 (lower is better)
Translates to: SALGTQECECNPGMFTANCMDFE*VISGRT
Trigger: GGTCCTCCCTGAAATAACGCATTCGAAATCCATGCA...GTTAGCTGTGAACATGCCAGGGTTGCATTCACATTCCTGGGTACCCAGTGCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR GCA 90 bp ACTCCGTGGCGGAAGGGAAATTTAAGAGGCCACCGGGGCTCCATCTCTTTGTACTCCTATGCTTTGAGCTaGCCAAACCTATTATTTCTC +
Preference number: 4 (lower is better)
Translates to: TPWRKGNLRGHRGSISLYSYALS*PNLLFL
Trigger: GAGAAATAATAGGTTTGGGCAGCTCAAAGCATAGGA...GTACAAAGAGATGGAGCCCCGGTGGCCTCTTAAATTTCCCTTCCGCCACGGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR GCA 90 bp CTGGGAAATCAACTTGGACGCATTATAAAACAGAATCTCCCCACCGTCACCATTACCACAATACAGGAGTaGCGCTCGTCACACGCTCTG +
Preference number: 4 (lower is better)
Translates to: LGNQLGRIIKQNLPTVTITTIQE*RSSHAL
Trigger: CAGAGCGTGTGACGAGCGGCACTCCTGTATTGTGGT...AATGGTGACGGTGGGGAGATTCTGTTTTATAATGCGTCCAAGTTGATTTCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505140.1
CDS-3UTR CCA 90 bp TGTCCACTTTCCCGAAGCCCTTTGATTAACTCCTTGGCCCTACTAGCTTTAGACCACTGTGACTGGAACTaGGAAGAAGGAGAAGATCCG +
Preference number: 4 (lower is better)
Translates to: CPLSRSPLINSLALLALDHCDWN*EEGEDP
Trigger: CGGATCTTCTCCTTCTTCCCAGTTCCAGTCACAGTG...GTCTAAAGCTAGTAGGGCCAAGGAGTTAATCAAAGGGCTTCGGGAAAGTGGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CCA 90 bp AGAAACGCAGGAGAATATGCCAGTTCTCAGTTTTGCCTCAAAGTTGTTAGGCTGTCTGTCAGCCTGCTGTaGTCACAGGTCTCCGTTCCT +
Preference number: 4 (lower is better)
Translates to: RNAGEYASSQFCLKVVRLSVSLL*SQVSVP
Trigger: AGGAACGGAGACCTGTGACCACAGCAGGCTGACAGA...CAGCCTAACAACTTTGAGGCAAAACTGAGAACTGGCATATTCTCCTGCGTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CCA 90 bp ACTCCGTGGCGGAAGGGAAATTTAAGAGGCCACCGGGGCTCCATCTCTTTGTACCTGGCATTAGAATGCTaGATGAGACTTAAAGCTTCA +
Preference number: 4 (lower is better)
Translates to: TPWRKGNLRGHRGSISLYLALEC*MRLKAS
Trigger: TGAAGCTTTAAGTCTCATCCAGCATTCTAATGCCAG...GTACAAAGAGATGGAGCCCCGGTGGCCTCTTAAATTTCCCTTCCGCCACGGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CCA 90 bp CTATCATTCAACCATGTCAGTTTGCTGCCCCCGGGGCATTTCAAACCAAACCTTACACCCCATCAGCACTaGGTACCCAGGAATGTGAAT +
Preference number: 4 (lower is better)
Translates to: LSFNHVSLLPPGHFKPNLTPHQH*VPRNVN
Trigger: ATTCACATTCCTGGGTACCCAGTGCTGATGGGGTGT...AAGGTTTGGTTTGAAATGCCCCGGGGGCAGCAAACTGACATGGTTGAATGATAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CCA 90 bp CTATCATTCAACCATGTCAGTTTGCTGCCCCCGGGGCATTTCAAACCAAACCTTCTCTGTTGCTCAGGCTaGATTCCAACTCCTGTGCTT +
Preference number: 4 (lower is better)
Translates to: LSFNHVSLLPPGHFKPNLLCCSG*IPTPVL
Trigger: AAGCACAGGAGTTGGAATCCAGCCTGAGCAACAGAG...AAGGTTTGGTTTGAAATGCCCCGGGGGCAGCAAACTGACATGGTTGAATGATAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CCA 90 bp AGACAGTACCACAATACAGGAGTGCCGCTCGTCACACGCTCTGGCCACTTGGGACCTGGGAAATCAACTTaGACGCATTATAAAACAGAA +
Preference number: 4 (lower is better)
Translates to: RQYHNTGVPLVTRSGHLGPGKST*THYKTE
Trigger: TTCTGTTTTATAATGCGTCCAAGTTGATTTCCCAGG...TCCCAAGTGGCCAGAGCGTGTGACGAGCGGCACTCCTGTATTGTGGTACTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505140.1
CDS-3UTR CCA 90 bp ACAGTACCACAATACAGGAGTGCCGCTCGTCACACGCTCTGGCCACTTGGGACACAAACTAGAAATAAATaGTCAAGACCGGCTTATCAG +
Preference number: 4 (lower is better)
Translates to: TVPQYRSAARHTLWPLGTQTRNK*SRPAYQ
Trigger: CTGATAAGCCGGTCTTGACCATTTATTTCTAGTTTG...TGTCCCAAGTGGCCAGAGCGTGTGACGAGCGGCACTCCTGTATTGTGGTACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505140.1
CDS-3UTR TCA 90 bp GTCCTGGGCACTGTTCTGCTGGGAGTTACTGAAGTAGAAAGATTTTTAAATACAGCCGAAGTGTCATCCTaGCTGACTGTCCCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: VLGTVLLGVTEVERFLNTAEVSS*LTVPAV
Trigger: CACTGCAGGGACAGTCAGTCAGGATGACACTTCGGC...TGTATTTAAAAATCTTTCTACTTCAGTAACTCCCAGCAGAACAGTGCCCAGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR TCA 90 bp AGAAACGCAGGAGAATATGCCAGTTCTCAGTTTTGCCTCAAAGTTGTTAGGCTGTATACACGGTGGGGGTaGGAACTGACAGCTTGCTCA +
Preference number: 4 (lower is better)
Translates to: RNAGEYASSQFCLKVVRLYTRWG*ELTACS
Trigger: TGAGCAAGCTGTCAGTTCTCACCCCCACCGTGTATA...CAGCCTAACAACTTTGAGGCAAAACTGAGAACTGGCATATTCTCCTGCGTTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR TCA 90 bp AGAAACGCAGGAGAATATGCCAGTTCTCAGTTTTGCCTCAAAGTTGTTAGGCTGGGGTACCCAGGAATGTaGATGCAACCCTGGCATGTT +
Preference number: 4 (lower is better)
Translates to: RNAGEYASSQFCLKVVRLGYPGM*MQPWHV
Trigger: AACATGCCAGGGTTGCATTCACATTCCTGGGTACCC...CAGCCTAACAACTTTGAGGCAAAACTGAGAACTGGCATATTCTCCTGCGTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR TCA 90 bp ATCGCTGTGGGGTGCTGGGTGATTGGTGTTGATGTGTACCCTGTACTCCTTTGTAAACCAGTCAGCTACTaGGTCTTCAAATCGATGTGT +
Preference number: 4 (lower is better)
Translates to: IAVGCWVIGVDVYPVLLCKPVSY*VFKSMC
Trigger: ACACATCGATTTGAAGACTCAGTAGCTGACTGGTTT...ACAAAGGAGTACAGGGTACACATCAACACCAATCACCCAGCACCCCACAGCGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR TCA 90 bp TGTCCACTTTCCCGAAGCCCTTTGATTAACTCCTTGGCCCTACTAGCTTTAGACGACTGTGCACTAGTTTaGTTGATGAAGACGTCGTCC +
Preference number: 4 (lower is better)
Translates to: CPLSRSPLINSLALLALDDCALV*LMKTSS
Trigger: GGACGACGTCTTCATCAATCAAACTAGTGCACAGTC...GTCTAAAGCTAGTAGGGCCAAGGAGTTAATCAAAGGGCTTCGGGAAAGTGGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR GCA 90 bp GAAGAAACGCAGGAGAATATGCCAGTTCTCAGTTTTGCCTCAAAGTTGTTAGGCACCATGTCAGTTTGCTaGCCCCGGGGCATTTCAAAC +
Preference number: 4 (lower is better)
Translates to: EETQENMPVLSFASKLLGTMSVC*PRGISN
Trigger: GTTTGAAATGCCCCGGGGGCAGCAAACTGACATGGT...GCCTAACAACTTTGAGGCAAAACTGAGAACTGGCATATTCTCCTGCGTTTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR GCA 90 bp GAAGAAACGCAGGAGAATATGCCAGTTCTCAGTTTTGCCTCAAAGTTGTTAGGCTCAACCATGTCAGTTTaGTGCCCCCGGGGCATTTCA +
Preference number: 4 (lower is better)
Translates to: EETQENMPVLSFASKLLGSTMSV*CPRGIS
Trigger: TGAAATGCCCCGGGGGCAGCAAACTGACATGGTTGA...GCCTAACAACTTTGAGGCAAAACTGAGAACTGGCATATTCTCCTGCGTTTCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR GCA 90 bp CAAGTCCTGCCAAATCAGCTCCATTGTGGTGGCCTGAGTGTGGCATTGCTTCCTGAACGCAGAGTGAAATaGTATCATTCAACCATGTCA +
Preference number: 4 (lower is better)
Translates to: QVLPNQLHCGGLSVALLPERRVK*YHSTMS
Trigger: TGACATGGTTGAATGATAGCATTTCACTCTGCGTTC...AGGAAGCAATGCCACACTCAGGCCACCACAATGGAGCTGATTTGGCAGGACTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR GCA 90 bp GCTGTGGGGTGCTGGGTGATTGGTGTTGATGTGTACCCTGTACTCCTTTGTTACCGAAGAAGGATCACGTaGTTTAAGGTGAAAGGTTTG +
Preference number: 4 (lower is better)
Translates to: AVGCWVIGVDVYPVLLCYRRRIT*FKVKGL
Trigger: CAAACCTTTCACCTTAAAGCACGTGATCCTTCTTCG...GTAACAAAGGAGTACAGGGTACACATCAACACCAATCACCCAGCACCCCACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR GCA 90 bp TCAGCACTGGGTACCCAGGAATGTGAATGCAACCCTGGCATGTTCACAGCTAACGGTAACTTTCTAAAATaGAGCTGTCAGCTGAATGCC +
Preference number: 4 (lower is better)
Translates to: SALGTQECECNPGMFTANGNFLK*SCQLNA
Trigger: GGCATTCAGCTGACAGCTGCATTTTAGAAAGTTACC...GTTAGCTGTGAACATGCCAGGGTTGCATTCACATTCCTGGGTACCCAGTGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR GCA 90 bp GAAGAAACGCAGGAGAATATGCCAGTTCTCAGTTTTGCCTCAAAGTTGTTAGGCACAAGACAAACCCGATaGAGGCAGTCATGGGGGATG +
Preference number: 4 (lower is better)
Translates to: EETQENMPVLSFASKLLGTRQTR*RQSWGM
Trigger: CATCCCCCATGACTGCCTGCATCGGGTTTGTCTTGT...GCCTAACAACTTTGAGGCAAAACTGAGAACTGGCATATTCTCCTGCGTTTCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR GCA 90 bp CAAACGGGAGAGTTTCCTGCCAATGTGCAAATCCGTCAATACTCCCTGAGCCATTGGAGAGAGAAAGGGTaGCTAGTTCTTGTGTGCTTT +
Preference number: 4 (lower is better)
Translates to: QTGEFPANVQIRQYSLSHWREKG*LVLVCF
Trigger: AAAGCACACAAGAACTAGGCACCCTTTCTCTCTCCA...ATGGCTCAGGGAGTATTGACGGATTTGCACATTGGCAGGAAACTCTCCCGTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR GCA 90 bp GTCCTGGGCACTGTTCTGCTGGGAGTTACTGAAGTAGAAAGATTTTTAAATACACAAACCGTGGGTCCCTaGATGTTCATGGCCCCACAC +
Preference number: 4 (lower is better)
Translates to: VLGTVLLGVTEVERFLNTQTVGP*MFMAPH
Trigger: GTGTGGGGCCATGAACATGCAGGGACCCACGGTTTG...TGTATTTAAAAATCTTTCTACTTCAGTAACTCCCAGCAGAACAGTGCCCAGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR GCA 90 bp AGAAACGCAGGAGAATATGCCAGTTCTCAGTTTTGCCTCAAAGTTGTTAGGCTGACCATCGCTGTGGGGTaGTGGGTGATTGGTGTTGAT +
Preference number: 4 (lower is better)
Translates to: RNAGEYASSQFCLKVVRLTIAVG*WVIGVD
Trigger: ATCAACACCAATCACCCAGCACCCCACAGCGATGGT...CAGCCTAACAACTTTGAGGCAAAACTGAGAACTGGCATATTCTCCTGCGTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR GCA 90 bp AGAAACGCAGGAGAATATGCCAGTTCTCAGTTTTGCCTCAAAGTTGTTAGGCTGCAGCGTATTTGCCACTaGAAGGCTTGTGGATGTGGC +
Preference number: 4 (lower is better)
Translates to: RNAGEYASSQFCLKVVRLQRICH*KACGCG
Trigger: GCCACATCCACAAGCCTTGCAGTGGCAAATACGCTG...CAGCCTAACAACTTTGAGGCAAAACTGAGAACTGGCATATTCTCCTGCGTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR GCA 90 bp GCTTATCAGGACACATTCGGGATACCCCTAATCCTTACCTGGACTACGAAACAAGCCTTTGTACTCCCGTaGTACCTCTCCATCTTAGGA +
Preference number: 4 (lower is better)
Translates to: AYQDTFGIPLILTWTTKQAFVLP*YLSILG
Trigger: TCCTAAGATGGAGAGGTAGCACGGGAGTACAAAGGC...TTGTTTCGTAGTCCAGGTAAGGATTAGGGGTATCCCGAATGTGTCCTGATAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505140.1
CDS-3UTR CCA 90 bp AACTGCAGGTATGTTGAGCACACAAGCAATCACCGTATTGTATTAGAGACATTTGAAAGACGGCAGCGATaGCCCCTGCCACCACCATAC +
Preference number: 4 (lower is better)
Translates to: NCRYVEHTSNHRIVLETFERRQR*PLPPPY
Trigger: GTATGGTGGTGGCAGGGGCCATCGCTGCCGTCTTTC...AAATGTCTCTAATACAATACGGTGATTGCTTGTGTGCTCAACATACCTGCAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CCA 90 bp CTGACAGTCACGCGTCTTAAACAATCAGTAACAATTTTAAGGTACACAATGGGTGAAAGACGGCAGCGATaGCCCCTGCCACCACCATAC +
Preference number: 4 (lower is better)
Translates to: LTVTRLKQSVTILRYTMGERRQR*PLPPPY
Trigger: GTATGGTGGTGGCAGGGGCCATCGCTGCCGTCTTTC...ACCCATTGTGTACCTTAAAATTGTTACTGATTGTTTAAGACGCGTGACTGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646501.1
CDS-3UTR CCA 90 bp AGAAACGCAGGAGAATATGCCAGTTCTCAGTTTTGCCTCAAAGTTGTTAGGCTGAAGAGAATGCCAGCATaGGTCCATGCCATTGCGTCC +
Preference number: 4 (lower is better)
Translates to: RNAGEYASSQFCLKVVRLKRMPA*VHAIAS
Trigger: GGACGCAATGGCATGGACCCATGCTGGCATTCTCTT...CAGCCTAACAACTTTGAGGCAAAACTGAGAACTGGCATATTCTCCTGCGTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CCA 90 bp GTCGGCATGGAACAGAATCACGTGTGTGGCTCTTGTCCACTTTCCCGAAGCCCTTCTAACCAAATATTATaGCCCACTGATCTTGATCAC +
Preference number: 4 (lower is better)
Translates to: VGMEQNHVCGSCPLSRSPSNQIL*PTDLDH
Trigger: GTGATCAAGATCAGTGGGCCATAATATTTGGTTAGA...AGGGCTTCGGGAAAGTGGACAAGAGCCACACACGTGATTCTGTTCCATGCCGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CCA 90 bp GCTGTGGGGTGCTGGGTGATTGGTGTTGATGTGTACCCTGTACTCCTTTGTTACAACCACTTAAACTCTTaGAGAGAGAAAGGGTGCCTA +
Preference number: 4 (lower is better)
Translates to: AVGCWVIGVDVYPVLLCYNHLNS*REKGCL
Trigger: TAGGCACCCTTTCTCTCTCCAAGAGTTTAAGTGGTT...GTAACAAAGGAGTACAGGGTACACATCAACACCAATCACCCAGCACCCCACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR TCA 90 bp GTCCTGGGCACTGTTCTGCTGGGAGTTACTGAAGTAGAAAGATTTTTAAATACACCAGGCCCACATTTTTaGAGTCACTCATGGGACCCG +
Preference number: 4 (lower is better)
Translates to: VLGTVLLGVTEVERFLNTPGPHF*SHSWDP
Trigger: CGGGTCCCATGAGTGACTTCAAAAATGTGGGCCTGG...TGTATTTAAAAATCTTTCTACTTCAGTAACTCCCAGCAGAACAGTGCCCAGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR TCA 90 bp AGAAACGCAGGAGAATATGCCAGTTCTCAGTTTTGCCTCAAAGTTGTTAGGCTGCGTGAGGCAGGGGTATaGAGTCAGTTGTTTCGTTTG +
Preference number: 4 (lower is better)
Translates to: RNAGEYASSQFCLKVVRLREAGV*SQLFRL
Trigger: CAAACGAAACAACTGACTTCATACCCCTGCCTCACG...CAGCCTAACAACTTTGAGGCAAAACTGAGAACTGGCATATTCTCCTGCGTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR TCA 90 bp GTCCTGGGCACTGTTCTGCTGGGAGTTACTGAAGTAGAAAGATTTTTAAATACAGAGGAAAAGCCACTCTaGGGAAGCACGCCAAGGACA +
Preference number: 4 (lower is better)
Translates to: VLGTVLLGVTEVERFLNTEEKPL*GSTPRT
Trigger: TGTCCTTGGCGTGCTTCCTCAGAGTGGCTTTTCCTC...TGTATTTAAAAATCTTTCTACTTCAGTAACTCCCAGCAGAACAGTGCCCAGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR TCA 90 bp CTCATTAAATCCAAGGAGCAGCGTATTTGCCACTGCAAGGCTTGTGGATGTGGCCCAACCCCAGAAGCATaGAAGTCACACATGTTAAAA +
Preference number: 4 (lower is better)
Translates to: LIKSKEQRICHCKACGCGPTPEA*KSHMLK
Trigger: TTTTAACATGTGTGACTTTCATGCTTCTGGGGTTGG...GCCACATCCACAAGCCTTGCAGTGGCAAATACGCTGCTCCTTGGATTTAATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR TCA 90 bp CAAACGGGAGAGTTTCCTGCCAATGTGCAAATCCGTCAATACTCCCTGAGCCATACTGATCTTGATCACTaGAGGAATCTCTGGAGTTGT +
Preference number: 4 (lower is better)
Translates to: QTGEFPANVQIRQYSLSHTDLDH*RNLWSC
Trigger: ACAACTCCAGAGATTCCTTCAGTGATCAAGATCAGT...ATGGCTCAGGGAGTATTGACGGATTTGCACATTGGCAGGAAACTCTCCCGTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR TCA 90 bp TCAGCACTGGGTACCCAGGAATGTGAATGCAACCCTGGCATGTTCACAGCTAACTTATTTGGCCCCATCTaGTACATCCTAAGCCAATAT +
Preference number: 4 (lower is better)
Translates to: SALGTQECECNPGMFTANLFGPI*YILSQY
Trigger: ATATTGGCTTAGGATGTATCAGATGGGGCCAAATAA...GTTAGCTGTGAACATGCCAGGGTTGCATTCACATTCCTGGGTACCCAGTGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR TCA 90 bp ATCGCTGTGGGGTGCTGGGTGATTGGTGTTGATGTGTACCCTGTACTCCTTTGTGGAACCACTTGGACTTaGCAGAGGTTTTTCAAAAAT +
Preference number: 4 (lower is better)
Translates to: IAVGCWVIGVDVYPVLLCGTTWT*QRFFKN
Trigger: ATTTTTGAAAAACCTCTGTCAAGTCCAAGTGGTTCC...ACAAAGGAGTACAGGGTACACATCAACACCAATCACCCAGCACCCCACAGCGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR TCA 90 bp CAAGTCCTGCCAAATCAGCTCCATTGTGGTGGCCTGAGTGTGGCATTGCTTCCTAATACACTTCTTAAATaGATGAGTGTCGGCATGGAA +
Preference number: 4 (lower is better)
Translates to: QVLPNQLHCGGLSVALLPNTLLK*MSVGME
Trigger: TTCCATGCCGACACTCATTCATTTAAGAAGTGTATT...AGGAAGCAATGCCACACTCAGGCCACCACAATGGAGCTGATTTGGCAGGACTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR TCA 90 bp GTACCTGGGAAATCAACTTGGACGCATTATAAAACAGAATCTCCCCACCGTCACGCGCTAGATTTTCAATaGCGCCACATGGAGAAAACG +
Preference number: 4 (lower is better)
Translates to: VPGKSTWTHYKTESPHRHALDFQ*RHMEKT
Trigger: CGTTTTCTCCATGTGGCGTCATTGAAAATCTAGCGC...GTGACGGTGGGGAGATTCTGTTTTATAATGCGTCCAAGTTGATTTCCCAGGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000505140.1
CDS-3UTR TCA 90 bp CCCCATCGCTGGAGAGCTTGCAGCGCTAGATTTTCAATGACGCCACATGGAGAAGGATTTGTAAATCGCTaGCAAATAAGCCATCATTCA +
Preference number: 4 (lower is better)
Translates to: PHRWRACSARFSMTPHGEGFVNR*QISHHS
Trigger: TGAATGATGGCTTATTTGTCAGCGATTTACAAATCC...TTCTCCATGTGGCGTCATTGAAAATCTAGCGCTGCAAGCTCTCCAGCGATGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505140.1
CDS-3UTR GCA 90 bp GTCCTGGGCACTGTTCTGCTGGGAGTTACTGAAGTAGAAAGATTTTTAAATACAGCCCATGGCGTCCCGTaGCTTATTCATTCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: VLGTVLLGVTEVERFLNTAHGVP*LIHSPL
Trigger: GAGAGGAGAATGAATAAGGCACGGGACGCCATGGGC...TGTATTTAAAAATCTTTCTACTTCAGTAACTCCCAGCAGAACAGTGCCCAGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR GCA 90 bp ACTCCGTGGCGGAAGGGAAATTTAAGAGGCCACCGGGGCTCCATCTCTTTGTACAAAAATATACTGCACTaGATGGATTTCGAATGCGTT +
Preference number: 4 (lower is better)
Translates to: TPWRKGNLRGHRGSISLYKNILH*MDFECV
Trigger: AACGCATTCGAAATCCATGCAGTGCAGTATATTTTT...GTACAAAGAGATGGAGCCCCGGTGGCCTCTTAAATTTCCCTTCCGCCACGGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR GCA 90 bp CTATCATTCAACCATGTCAGTTTGCTGCCCCCGGGGCATTTCAAACCAAACCTTGGTTTGAACAAGTCCTaGCAAATCAGCTCCATTGTG +
Preference number: 4 (lower is better)
Translates to: LSFNHVSLLPPGHFKPNLGLNKS*QISSIV
Trigger: CACAATGGAGCTGATTTGGCAGGACTTGTTCAAACC...AAGGTTTGGTTTGAAATGCCCCGGGGGCAGCAAACTGACATGGTTGAATGATAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR GCA 90 bp AGAAACGCAGGAGAATATGCCAGTTCTCAGTTTTGCCTCAAAGTTGTTAGGCTGAGAAGTCAGCTCACCTaGAAAGCTGGTACTAACCGG +
Preference number: 4 (lower is better)
Translates to: RNAGEYASSQFCLKVVRLRSQLT*KAGTNR
Trigger: CCGGTTAGTACCAGCTTTGCAGGTGAGCTGACTTCT...CAGCCTAACAACTTTGAGGCAAAACTGAGAACTGGCATATTCTCCTGCGTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR GCA 90 bp CCAATGCCCCATCGCTGGAGAGCTTGCAGCGCTAGATTTTCAATGACGCCACATTACATAATACTGCCGTaGACTAAAAACCCTTCCATA +
Preference number: 4 (lower is better)
Translates to: PMPHRWRACSARFSMTPHYIILP*TKNPSI
Trigger: TATGGAAGGGTTTTTAGTGCACGGCAGTATTATGTA...ATGTGGCGTCATTGAAAATCTAGCGCTGCAAGCTCTCCAGCGATGGGGCATTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000505140.1
CDS-3UTR GCA 90 bp GACAAATCCAAACAGATATTCGTCAAACGAAGGAGTCACACAAATCTCCGATTTAGTGCAGGGTGCCAATaGCCCATCGCTGGAGAGCTT +
Preference number: 4 (lower is better)
Translates to: DKSKQIFVKRRSHTNLRFSAGCQ*PIAGEL
Trigger: AAGCTCTCCAGCGATGGGGCATTGGCACCCTGCACT...AAATCGGAGATTTGTGTGACTCCTTCGTTTGACGAATATCTGTTTGGATTTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505140.1
CDS-3UTR CCA 90 bp CTCATTAAATCCAAGGAGCAGCGTATTTGCCACTGCAAGGCTTGTGGATGTGGCACCGACTCGTCCACATaGTGCAGTTTATTGATAATG +
Preference number: 4 (lower is better)
Translates to: LIKSKEQRICHCKACGCGTDSST*CSLLIM
Trigger: CATTATCAATAAACTGCACCATGTGGACGAGTCGGT...GCCACATCCACAAGCCTTGCAGTGGCAAATACGCTGCTCCTTGGATTTAATGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CCA 90 bp AACTGCAGGTATGTTGAGCACACAAGCAATCACCGTATTGTATTAGAGACATTTGAGGCATGTCTGTCATaGCAGAGTCTTCCCCCTCCG +
Preference number: 4 (lower is better)
Translates to: NCRYVEHTSNHRIVLETFEACLS*QSLPPP
Trigger: CGGAGGGGGAAGACTCTGCCATGACAGACATGCCTC...AAATGTCTCTAATACAATACGGTGATTGCTTGTGTGCTCAACATACCTGCAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CCA 90 bp TGTCCACTTTCCCGAAGCCCTTTGATTAACTCCTTGGCCCTACTAGCTTTAGACCTTTATCGTATGGTGTaGGAGGGAAGTACCGTAGTA +
Preference number: 4 (lower is better)
Translates to: CPLSRSPLINSLALLALDLYRMV*EGSTVV
Trigger: TACTACGGTACTTCCCTCCCACACCATACGATAAAG...GTCTAAAGCTAGTAGGGCCAAGGAGTTAATCAAAGGGCTTCGGGAAAGTGGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CCA 90 bp GCTGTGGGGTGCTGGGTGATTGGTGTTGATGTGTACCCTGTACTCCTTTGTTACTTTGTTACGCAAGGGTaGTTTGAACTTAGCTTTCAG +
Preference number: 4 (lower is better)
Translates to: AVGCWVIGVDVYPVLLCYFVTQG*FELSFQ
Trigger: CTGAAAGCTAAGTTCAAACCACCCTTGCGTAACAAA...GTAACAAAGGAGTACAGGGTACACATCAACACCAATCACCCAGCACCCCACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CCA 90 bp ATCATCTCAAAAGCACGTGAACCTGAGGCTGCATTGGCCTTTGTACTCCCGTGCTTTTCCAGAGAGGGCTaGAAAAGTCTGCTGAATAAT +
Preference number: 4 (lower is better)
Translates to: IISKAREPEAALAFVLPCFSREG*KSLLNN
Trigger: ATTATTCAGCAGACTTTTCCAGCCCTCTCTGGAAAA...GCACGGGAGTACAAAGGCCAATGCAGCCTCAGGTTCACGTGCTTTTGAGATGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000505140.1
3UTR CAA 72 bp TCATGTATATACACGGTGGGGGTGAGAACTGACAGCTaGCTCAGATCTAGGAGAACGCAGAGTGAAATGCTA +
Preference number: 4 (lower is better)
Translates to: SCIYTVGVRTDS*LRSRRTQSEML
Trigger: TAGCATTTCACTCTGCGTTCTCCTAGATCTGAGCAAGCTGTCAGTTCTCACCCCCACCGTGTATATACATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR CAA 72 bp TCTTGTCCACTTTCCCGAAGCCCTTTGATTAACTCCTaGGCCCTACTAGCTTTAGACAGTTCCCTGATCAGT +
Preference number: 4 (lower is better)
Translates to: SCPLSRSPLINS*ALLALDSSLIS
Trigger: ACTGATCAGGGAACTGTCTAAAGCTAGTAGGGCCAAGGAGTTAATCAAAGGGCTTCGGGAAAGTGGACAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR CAA 72 bp TTAATCATCTCAAAAGCACGTGAACCTGAGGCTGCATaGGCCTTTGTACTCCCGTGCTACCTCTCCATCTTA +
Preference number: 4 (lower is better)
Translates to: LIISKAREPEAA*AFVLPCYLSIL
Trigger: TAAGATGGAGAGGTAGCACGGGAGTACAAAGGCCAATGCAGCCTCAGGTTCACGTGCTTTTGAGATGATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505140.1
CDS-3UTR TCA 90 bp TGGTTCCTTTATTCACCACTGACAGTCACGCGTCTTAAACAATCAGTAACAATTCCAGGCCCACATTTTTaGAGTCACTCATGGGACCCG +
Preference number: 4 (lower is better)
Translates to: WFLYSPLTVTRLKQSVTIPGPHF*SHSWDP
Trigger: CGGGTCCCATGAGTGACTTCAAAAATGTGGGCCTGG...AATTGTTACTGATTGTTTAAGACGCGTGACTGTCAGTGGTGAATAAAGGAACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646501.1
CDS-3UTR TCA 90 bp CAAACGGGAGAGTTTCCTGCCAATGTGCAAATCCGTCAATACTCCCTGAGCCATCAAAGTCCACTCCGATaGTGTCTATCAAGATTTTCT +
Preference number: 4 (lower is better)
Translates to: QTGEFPANVQIRQYSLSHQSPLR*CLSRFS
Trigger: AGAAAATCTTGATAGACATCATCGGAGTGGACTTTG...ATGGCTCAGGGAGTATTGACGGATTTGCACATTGGCAGGAAACTCTCCCGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR TCA 90 bp AACTGCAGGTATGTTGAGCACACAAGCAATCACCGTATTGTATTAGAGACATTTCTGTGGGGTGCTGGGTaGTTGGTGTTGATGTGTACC +
Preference number: 4 (lower is better)
Translates to: NCRYVEHTSNHRIVLETFLWGAG*LVLMCT
Trigger: GGTACACATCAACACCAATCACCCAGCACCCCACAG...AAATGTCTCTAATACAATACGGTGATTGCTTGTGTGCTCAACATACCTGCAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR TCA 90 bp GACAAATCCAAACAGATATTCGTCAAACGAAGGAGTCACACAAATCTCCGATTTTGGAAAAGTCACCCTTaGCAAGCTGCACACCCGACC +
Preference number: 4 (lower is better)
Translates to: DKSKQIFVKRRSHTNLRFWKSHP*QAAHPT
Trigger: GGTCGGGTGTGCAGCTTGTCAAGGGTGACTTTTCCA...AAATCGGAGATTTGTGTGACTCCTTCGTTTGACGAATATCTGTTTGGATTTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505140.1
CDS-3UTR TCA 90 bp CTGACAGTCACGCGTCTTAAACAATCAGTAACAATTTTAAGGTACACAATGGGTGATCCTATCAGTGTGTaGAAGACGGCAGCGATGGCC +
Preference number: 4 (lower is better)
Translates to: LTVTRLKQSVTILRYTMGDPISV*KTAAMA
Trigger: GGCCATCGCTGCCGTCTTTCACACACTGATAGGATC...ACCCATTGTGTACCTTAAAATTGTTACTGATTGTTTAAGACGCGTGACTGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646501.1
CDS-3UTR GCA 90 bp CTCATTAAATCCAAGGAGCAGCGTATTTGCCACTGCAAGGCTTGTGGATGTGGCACAATACGTTTCAACTaGAGGTATGTTGAGCACACA +
Preference number: 4 (lower is better)
Translates to: LIKSKEQRICHCKACGCGTIRFN*RYVEHT
Trigger: TGTGTGCTCAACATACCTGCAGTTGAAACGTATTGT...GCCACATCCACAAGCCTTGCAGTGGCAAATACGCTGCTCCTTGGATTTAATGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR GCA 90 bp CAAACGGGAGAGTTTCCTGCCAATGTGCAAATCCGTCAATACTCCCTGAGCCATTTCCTCACACTCCACTaGAATTTTGGTTCCAAAGAA +
Preference number: 4 (lower is better)
Translates to: QTGEFPANVQIRQYSLSHFLTLH*NFGSKE
Trigger: TTCTTTGGAACCAAAATTGCAGTGGAGTGTGAGGAA...ATGGCTCAGGGAGTATTGACGGATTTGCACATTGGCAGGAAACTCTCCCGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR GCA 90 bp TGTCCACTTTCCCGAAGCCCTTTGATTAACTCCTTGGCCCTACTAGCTTTAGACGTATCCCAGACACGTTaGTCAAAAACATGCTTTCCT +
Preference number: 4 (lower is better)
Translates to: CPLSRSPLINSLALLALDVSQTR*SKTCFP
Trigger: AGGAAAGCATGTTTTTGAGCAACGTGTCTGGGATAC...GTCTAAAGCTAGTAGGGCCAAGGAGTTAATCAAAGGGCTTCGGGAAAGTGGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CCA 90 bp CTATCATTCAACCATGTCAGTTTGCTGCCCCCGGGGCATTTCAAACCAAACCTTTCACCAGTTTGTTGCTaGGGTTATTCTTGTCGAAAG +
Preference number: 4 (lower is better)
Translates to: LSFNHVSLLPPGHFKPNLSPVCC*GYSCRK
Trigger: CTTTCGACAAGAATAACCCCAGCAACAAACTGGTGA...AAGGTTTGGTTTGAAATGCCCCGGGGGCAGCAAACTGACATGGTTGAATGATAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CCA 90 bp GAAGAAACGCAGGAGAATATGCCAGTTCTCAGTTTTGCCTCAAAGTTGTTAGGCAAATCAGCTCCATTGTaGTGGCCTGAGTGTGGCATT +
Preference number: 4 (lower is better)
Translates to: EETQENMPVLSFASKLLGKSAPL*WPECGI
Trigger: AATGCCACACTCAGGCCACCACAATGGAGCTGATTT...GCCTAACAACTTTGAGGCAAAACTGAGAACTGGCATATTCTCCTGCGTTTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CCA 90 bp CTATCATTCAACCATGTCAGTTTGCTGCCCCCGGGGCATTTCAAACCAAACCTTAGAAATGCAAACAAGTaGCCTTCTGTGCCCCATTTA +
Preference number: 4 (lower is better)
Translates to: LSFNHVSLLPPGHFKPNLRNANK*PSVPHL
Trigger: TAAATGGGGCACAGAAGGCCACTTGTTTGCATTTCT...AAGGTTTGGTTTGAAATGCCCCGGGGGCAGCAAACTGACATGGTTGAATGATAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CCA 90 bp CTCATTAAATCCAAGGAGCAGCGTATTTGCCACTGCAAGGCTTGTGGATGTGGCCCCAAGGTTATTTATTaGGAAGACTCAGAGAGTGAA +
Preference number: 4 (lower is better)
Translates to: LIKSKEQRICHCKACGCGPKVIY*EDSESE
Trigger: TTCACTCTCTGAGTCTTCCCAATAAATAACCTTGGG...GCCACATCCACAAGCCTTGCAGTGGCAAATACGCTGCTCCTTGGATTTAATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CCA 90 bp GAAGAAACGCAGGAGAATATGCCAGTTCTCAGTTTTGCCTCAAAGTTGTTAGGCCGCCATTTCTTGCCCTaGCTTATAGCTAGGGAACAT +
Preference number: 4 (lower is better)
Translates to: EETQENMPVLSFASKLLGRHFLP*LIAREH
Trigger: ATGTTCCCTAGCTATAAGCCAGGGCAAGAAATGGCG...GCCTAACAACTTTGAGGCAAAACTGAGAACTGGCATATTCTCCTGCGTTTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR CAA 72 bp TGGGAAGCAAATCAAAGGAAGCCGAGTTTTAACCTGTaGATTCTTAAGAGCGATGAAGGGGGACAGGAGAGT +
Preference number: 4 (lower is better)
Translates to: WEANQRKPSFNL*ILKSDEGGQES
Trigger: ACTCTCCTGTCCCCCTTCATCGCTCTTAAGAATCAACAGGTTAAAACTCGGCTTCCTTTGATTTGCTTCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR CAA 72 bp CCAAATCAGCTCCATTGTGGTGGCCTGAGTGTGGCATaGCTTCCTGTGTTCTCAGAAACTCTAACCAAATAT +
Preference number: 4 (lower is better)
Translates to: PNQLHCGGLSVA*LPVFSETLTKY
Trigger: ATATTTGGTTAGAGTTTCTGAGAACACAGGAAGCAATGCCACACTCAGGCCACCACAATGGAGCTGATTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR CAA 72 bp CCAGACACGTTGCTCAAAAACATGCTTTCCTACGGTTaGAGTGCTTTATATGAGAGCCATCAGAGGACTGTG +
Preference number: 4 (lower is better)
Translates to: PDTLLKNMLSYG*SALYESHQRTV
Trigger: CACAGTCCTCTGATGGCTCTCATATAAAGCACTCAAACCGTAGGAAAGCATGTTTTTGAGCAACGTGTCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR TCA 90 bp CAAACGGGAGAGTTTCCTGCCAATGTGCAAATCCGTCAATACTCCCTGAGCCATTTATACCCACAGTTTTaGTGTGAAACTGACAAACCT +
Preference number: 4 (lower is better)
Translates to: QTGEFPANVQIRQYSLSHLYPQF*CETDKP
Trigger: AGGTTTGTCAGTTTCACATCAAAACTGTGGGTATAA...ATGGCTCAGGGAGTATTGACGGATTTGCACATTGGCAGGAAACTCTCCCGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR TCA 90 bp TGGTTCCTTTATTCACCACTGACAGTCACGCGTCTTAAACAATCAGTAACAATTACGGAAGTCATGCCCTaGAGGCTTTATCCCCACCAA +
Preference number: 4 (lower is better)
Translates to: WFLYSPLTVTRLKQSVTITEVMP*RLYPHQ
Trigger: TTGGTGGGGATAAAGCCTTCAGGGCATGACTTCCGT...AATTGTTACTGATTGTTTAAGACGCGTGACTGTCAGTGGTGAATAAAGGAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646501.1
CDS-3UTR GCA 90 bp GAAGAAACGCAGGAGAATATGCCAGTTCTCAGTTTTGCCTCAAAGTTGTTAGGCGCCAGTTCTCAGTTTTaGCTCAAAGTTGTTAGGCTG +
Preference number: 4 (lower is better)
Translates to: EETQENMPVLSFASKLLGASSQF*LKVVRL
Trigger: CAGCCTAACAACTTTGAGGCAAAACTGAGAACTGGC...GCCTAACAACTTTGAGGCAAAACTGAGAACTGGCATATTCTCCTGCGTTTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR GCA 90 bp CAAACGGGAGAGTTTCCTGCCAATGTGCAAATCCGTCAATACTCCCTGAGCCATCAGCTGTCAGCTGAATaGCCTACAATGAAAAATAAA +
Preference number: 4 (lower is better)
Translates to: QTGEFPANVQIRQYSLSHQLSAE*PTMKNK
Trigger: TTTATTTTTCATTGTAGGGCATTCAGCTGACAGCTG...ATGGCTCAGGGAGTATTGACGGATTTGCACATTGGCAGGAAACTCTCCCGTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR GCA 90 bp CTCATTAAATCCAAGGAGCAGCGTATTTGCCACTGCAAGGCTTGTGGATGTGGCAGATGCACACCACTGTaGCCAGCTAAATATTTTAAT +
Preference number: 4 (lower is better)
Translates to: LIKSKEQRICHCKACGCGRCTPL*PAKYFN
Trigger: ATTAAAATATTTAGCTGGGCACAGTGGTGTGCATCT...GCCACATCCACAAGCCTTGCAGTGGCAAATACGCTGCTCCTTGGATTTAATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR GCA 90 bp TGGTTCCTTTATTCACCACTGACAGTCACGCGTCTTAAACAATCAGTAACAATTGCCCTGAAGGAGAGCTaGTTTTCCAGGGTCTTGGTT +
Preference number: 4 (lower is better)
Translates to: WFLYSPLTVTRLKQSVTIALKES*FSRVLV
Trigger: AACCAAGACCCTGGAAAAGCAGCTCTCCTTCAGGGC...AATTGTTACTGATTGTTTAAGACGCGTGACTGTCAGTGGTGAATAAAGGAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646501.1
CDS-3UTR GCA 90 bp GGTACACAATGGGTTTATGAAGTGTCATTCACAGTGTTTTATGTAACTGGTTTCCCACGACGGAAGTCATaGCCTGAAGGCTTTATCCCC +
Preference number: 4 (lower is better)
Translates to: GTQWVYEVSFTVFYVTGFPRRKS*PEGFIP
Trigger: GGGGATAAAGCCTTCAGGGCATGACTTCCGTCGTGG...GAAACCAGTTACATAAAACACTGTGAATGACACTTCATAAACCCATTGTGTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646501.1
CDS-3UTR CCA 90 bp GTCCTGGGCACTGTTCTGCTGGGAGTTACTGAAGTAGAAAGATTTTTAAATACACGCCTCCTGCATGTGTaGAGTAGATGGTTTCGAACT +
Preference number: 4 (lower is better)
Translates to: VLGTVLLGVTEVERFLNTRLLHV*SRWFRT
Trigger: AGTTCGAAACCATCTACTCCACACATGCAGGAGGCG...TGTATTTAAAAATCTTTCTACTTCAGTAACTCCCAGCAGAACAGTGCCCAGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CCA 90 bp AGAAACGCAGGAGAATATGCCAGTTCTCAGTTTTGCCTCAAAGTTGTTAGGCTGGCAATCACTCAGTTTTaGAGAAAGTCACACCTGGTC +
Preference number: 4 (lower is better)
Translates to: RNAGEYASSQFCLKVVRLAITQF*RKSHLV
Trigger: GACCAGGTGTGACTTTCTCCAAAACTGAGTGATTGC...CAGCCTAACAACTTTGAGGCAAAACTGAGAACTGGCATATTCTCCTGCGTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CCA 90 bp ATCGCTGTGGGGTGCTGGGTGATTGGTGTTGATGTGTACCCTGTACTCCTTTGTTGTGACTTTTCTGAGTaGAGTTTGGGTTATTTTGAT +
Preference number: 4 (lower is better)
Translates to: IAVGCWVIGVDVYPVLLCCDFSE*SLGYFD
Trigger: ATCAAAATAACCCAAACTCCACTCAGAAAAGTCACA...ACAAAGGAGTACAGGGTACACATCAACACCAATCACCCAGCACCCCACAGCGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CCA 90 bp CTATCATTCAACCATGTCAGTTTGCTGCCCCCGGGGCATTTCAAACCAAACCTTACAACCATTTTTAGCTaGTCTGTCCCCTTCTTTAAC +
Preference number: 4 (lower is better)
Translates to: LSFNHVSLLPPGHFKPNLTTIFS*SVPFFN
Trigger: GTTAAAGAAGGGGACAGACCAGCTAAAAATGGTTGT...AAGGTTTGGTTTGAAATGCCCCGGGGGCAGCAAACTGACATGGTTGAATGATAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR CAA 72 bp GGAGTTGTATTTCCTCATCTCATAATGAGGAGGCCCTaGCTGATCCTTCCTGGATTTAGAGGGAAAGGATTT +
Preference number: 4 (lower is better)
Translates to: GVVFPHLIMRRP*LILPGFRGKGF
Trigger: AAATCCTTTCCCTCTAAATCCAGGAAGGATCAGCAAGGGCCTCCTCATTATGAGATGAGGAAATACAACTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR CAA 72 bp GTCCCCTTCTTTAACCTAAGGAAACCACTTAAACTCTaGGAGAGAGAAAGGGTGCCTAGTTCTTGTGTGCTT +
Preference number: 4 (lower is better)
Translates to: VPFFNLRKPLKL*ERERVPSSCVL
Trigger: AAGCACACAAGAACTAGGCACCCTTTCTCTCTCCAAGAGTTTAAGTGGTTTCCTTAGGTTAAAGAAGGGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR TCA 90 bp AGTGACCCATTTATTCCCCAGTTACCCATAATGAAAAATAGTTCTGTCATTTACGGGAGAGGGAAGAGATaGTGCCGAAGTGTCATCCTG +
Preference number: 4 (lower is better)
Translates to: SDPFIPQLPIMKNSSVIYGRGKR*CRSVIL
Trigger: CAGGATGACACTTCGGCATCATCTCTTCCCTCTCCC...GTAAATGACAGAACTATTTTTCATTATGGGTAACTGGGGAATAAATGGGTCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR TCA 90 bp AACTGCAGGTATGTTGAGCACACAAGCAATCACCGTATTGTATTAGAGACATTTCCCTGGTCTTTGACATaGGAATCTCACAGGCATGGT +
Preference number: 4 (lower is better)
Translates to: NCRYVEHTSNHRIVLETFPWSLT*ESHRHG
Trigger: ACCATGCCTGTGAGATTCTCATGTCAAAGACCAGGG...AAATGTCTCTAATACAATACGGTGATTGCTTGTGTGCTCAACATACCTGCAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR TCA 90 bp AGAAACGCAGGAGAATATGCCAGTTCTCAGTTTTGCCTCAAAGTTGTTAGGCTGGAATCTATGTGTAGCTaGCAGCCACCTATAAAAGTG +
Preference number: 4 (lower is better)
Translates to: RNAGEYASSQFCLKVVRLESMCS*QPPIKV
Trigger: CACTTTTATAGGTGGCTGTCAGCTACACATAGATTC...CAGCCTAACAACTTTGAGGCAAAACTGAGAACTGGCATATTCTCCTGCGTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR GCA 90 bp TGGTTCCTTTATTCACCACTGACAGTCACGCGTCTTAAACAATCAGTAACAATTTGGTCCTGTCTCTCTTaGTGTTCACAAACACCAGGC +
Preference number: 4 (lower is better)
Translates to: WFLYSPLTVTRLKQSVTIWSCLS*CSQTPG
Trigger: GCCTGGTGTTTGTGAACAGCAAGAGAGACAGGACCA...AATTGTTACTGATTGTTTAAGACGCGTGACTGTCAGTGGTGAATAAAGGAACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646501.1
CDS-3UTR GCA 90 bp TGTCCACTTTCCCGAAGCCCTTTGATTAACTCCTTGGCCCTACTAGCTTTAGACCGTTATAAAATGTCTTaGTTTATCGTATGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: CPLSRSPLINSLALLALDRYKMS*FIVWCG
Trigger: CCCACACCATACGATAAAGCAAGACATTTTATAACG...GTCTAAAGCTAGTAGGGCCAAGGAGTTAATCAAAGGGCTTCGGGAAAGTGGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR GCA 90 bp CTCATTAAATCCAAGGAGCAGCGTATTTGCCACTGCAAGGCTTGTGGATGTGGCGTCTTGTTAGTAAAGTaGACTTTAAGTTATGTAGCC +
Preference number: 4 (lower is better)
Translates to: LIKSKEQRICHCKACGCGVLLVK*TLSYVA
Trigger: GGCTACATAACTTAAAGTGCACTTTACTAACAAGAC...GCCACATCCACAAGCCTTGCAGTGGCAAATACGCTGCTCCTTGGATTTAATGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CCA 90 bp GTCCTGGGCACTGTTCTGCTGGGAGTTACTGAAGTAGAAAGATTTTTAAATACAGTTTCATTCAAACCGTaGGTCCCTGCATGTTCATGG +
Preference number: 4 (lower is better)
Translates to: VLGTVLLGVTEVERFLNTVSFKP*VPACSW
Trigger: CCATGAACATGCAGGGACCCACGGTTTGAATGAAAC...TGTATTTAAAAATCTTTCTACTTCAGTAACTCCCAGCAGAACAGTGCCCAGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CCA 90 bp GTACCTGGGAAATCAACTTGGACGCATTATAAAACAGAATCTCCCCACCGTCACCCCCTAATCCTTACCTaGACTACGAAACAAATGTTT +
Preference number: 4 (lower is better)
Translates to: VPGKSTWTHYKTESPHRHPLILT*TTKQMF
Trigger: AAACATTTGTTTCGTAGTCCAGGTAAGGATTAGGGG...GTGACGGTGGGGAGATTCTGTTTTATAATGCGTCCAAGTTGATTTCCCAGGTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000505140.1
3UTR CAA 72 bp TTCAAAATAACCACACAGAGGAGTATCCCAGACACGTaGCTCAAAAACATGCTTTCCTACGGTTTGAGTGCT +
Preference number: 4 (lower is better)
Translates to: FKITTQRSIPDT*LKNMLSYGLSA
Trigger: AGCACTCAAACCGTAGGAAAGCATGTTTTTGAGCAACGTGTCTGGGATACTCCTCTGTGTGGTTATTTTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR TCA 90 bp GTCCTGGGCACTGTTCTGCTGGGAGTTACTGAAGTAGAAAGATTTTTAAATACATCATGTCTAGCTGGATaGTGGGACTCGATTAGAAGA +
Preference number: 4 (lower is better)
Translates to: VLGTVLLGVTEVERFLNTSCLAG*WDSIRR
Trigger: TCTTCTAATCGAGTCCCATCATCCAGCTAGACATGA...TGTATTTAAAAATCTTTCTACTTCAGTAACTCCCAGCAGAACAGTGCCCAGGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CCA 90 bp AGTGACCCATTTATTCCCCAGTTACCCATAATGAAAAATAGTTCTGTCATTTACGACCCACAGGGTATGTaGCTGTCAAAATCGCCACTG +
Preference number: 4 (lower is better)
Translates to: SDPFIPQLPIMKNSSVIYDPQGM*LSKSPL
Trigger: CAGTGGCGATTTTGACAGCCACATACCCTGTGGGTC...GTAAATGACAGAACTATTTTTCATTATGGGTAACTGGGGAATAAATGGGTCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CCA 90 bp CTATCATTCAACCATGTCAGTTTGCTGCCCCCGGGGCATTTCAAACCAAACCTTATATACTGCACTGCATaGATTTCGAATGCGTTATTT +
Preference number: 4 (lower is better)
Translates to: LSFNHVSLLPPGHFKPNLIYCTA*ISNALF
Trigger: AAATAACGCATTCGAAATCCATGCAGTGCAGTATAT...AAGGTTTGGTTTGAAATGCCCCGGGGGCAGCAAACTGACATGGTTGAATGATAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CCA 90 bp GGTACACAATGGGTTTATGAAGTGTCATTCACAGTGTTTTATGTAACTGGTTTCGCTTTTCCAGGGTCTTaGTTAAACTGGAGGCCAGTC +
Preference number: 4 (lower is better)
Translates to: GTQWVYEVSFTVFYVTGFAFPGS*LNWRPV
Trigger: GACTGGCCTCCAGTTTAACCAAGACCCTGGAAAAGC...GAAACCAGTTACATAAAACACTGTGAATGACACTTCATAAACCCATTGTGTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646501.1
CDS-3UTR TCA 90 bp AGAAACGCAGGAGAATATGCCAGTTCTCAGTTTTGCCTCAAAGTTGTTAGGCTGAGTTCTGTCATTTACTaGGCCTTACATTCAAATGCA +
Preference number: 4 (lower is better)
Translates to: RNAGEYASSQFCLKVVRLSSVIY*ALHSNA
Trigger: TGCATTTGAATGTAAGGCTCAGTAAATGACAGAACT...CAGCCTAACAACTTTGAGGCAAAACTGAGAACTGGCATATTCTCCTGCGTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR TCA 90 bp GTCCTGGGCACTGTTCTGCTGGGAGTTACTGAAGTAGAAAGATTTTTAAATACAAATGCAGCTGTCAGCTaGATGCCCTACAATGAAAAA +
Preference number: 4 (lower is better)
Translates to: VLGTVLLGVTEVERFLNTNAAVS*MPYNEK
Trigger: TTTTTCATTGTAGGGCATTCAGCTGACAGCTGCATT...TGTATTTAAAAATCTTTCTACTTCAGTAACTCCCAGCAGAACAGTGCCCAGGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR TCA 90 bp CTGACAGTCACGCGTCTTAAACAATCAGTAACAATTTTAAGGTACACAATGGGTTCCTTTATTCACCACTaGCAGTCACGCGTCTTAAAC +
Preference number: 4 (lower is better)
Translates to: LTVTRLKQSVTILRYTMGSFIHH*QSRVLN
Trigger: GTTTAAGACGCGTGACTGTCAGTGGTGAATAAAGGA...ACCCATTGTGTACCTTAAAATTGTTACTGATTGTTTAAGACGCGTGACTGTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646501.1
CDS-3UTR GCA 90 bp GTCCTGGGCACTGTTCTGCTGGGAGTTACTGAAGTAGAAAGATTTTTAAATACAAAACGCAGGAGAATATaGCAGTTCTCAGTTTTGCCT +
Preference number: 4 (lower is better)
Translates to: VLGTVLLGVTEVERFLNTKRRRI*QFSVLP
Trigger: AGGCAAAACTGAGAACTGGCATATTCTCCTGCGTTT...TGTATTTAAAAATCTTTCTACTTCAGTAACTCCCAGCAGAACAGTGCCCAGGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CCA 90 bp AGTGACCCATTTATTCCCCAGTTACCCATAATGAAAAATAGTTCTGTCATTTACGTGAACTTCTTGATGTaGGCTGCCGTGACTGTGTTG +
Preference number: 4 (lower is better)
Translates to: SDPFIPQLPIMKNSSVIYVNFLM*AAVTVL
Trigger: CAACACAGTCACGGCAGCCCACATCAAGAAGTTCAC...GTAAATGACAGAACTATTTTTCATTATGGGTAACTGGGGAATAAATGGGTCACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CCA 90 bp GGTACACAATGGGTTTATGAAGTGTCATTCACAGTGTTTTATGTAACTGGTTTCGGGTCTTGGTTAAACTaGAGGCCAGTCACTGTATGT +
Preference number: 4 (lower is better)
Translates to: GTQWVYEVSFTVFYVTGFGSWLN*RPVTVC
Trigger: ACATACAGTGACTGGCCTCCAGTTTAACCAAGACCC...GAAACCAGTTACATAAAACACTGTGAATGACACTTCATAAACCCATTGTGTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646501.1
CDS-3UTR TCA 90 bp GTCCTGGGCACTGTTCTGCTGGGAGTTACTGAAGTAGAAAGATTTTTAAATACAGCTACAAAAACAACCTaGGCTATGACATCTGAGATT +
Preference number: 4 (lower is better)
Translates to: VLGTVLLGVTEVERFLNTATKTT*AMTSEI
Trigger: AATCTCAGATGTCATAGCTCAGGTTGTTTTTGTAGC...TGTATTTAAAAATCTTTCTACTTCAGTAACTCCCAGCAGAACAGTGCCCAGGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR GCA 90 bp AACTGCAGGTATGTTGAGCACACAAGCAATCACCGTATTGTATTAGAGACATTTCCTTACTATTTCCTATaGTTTGAGCTGCCCAAACCT +
Preference number: 4 (lower is better)
Translates to: NCRYVEHTSNHRIVLETFPYYFL*FELPKP
Trigger: AGGTTTGGGCAGCTCAAAGCATAGGAAATAGTAAGG...AAATGTCTCTAATACAATACGGTGATTGCTTGTGTGCTCAACATACCTGCAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR GCA 90 bp AGAAACGCAGGAGAATATGCCAGTTCTCAGTTTTGCCTCAAAGTTGTTAGGCTGAGTGCATATATCTTATaGAGTCTTTTAGAGATCCTG +
Preference number: 4 (lower is better)
Translates to: RNAGEYASSQFCLKVVRLSAYIL*SLLEIL
Trigger: CAGGATCTCTAAAAGACTGCATAAGATATATGCACT...CAGCCTAACAACTTTGAGGCAAAACTGAGAACTGGCATATTCTCCTGCGTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CCA 90 bp AGTGACCCATTTATTCCCCAGTTACCCATAATGAAAAATAGTTCTGTCATTTACTCTTGCTTTATCGTATaGTGTGGGAGGGAAGTACCG +
Preference number: 4 (lower is better)
Translates to: SDPFIPQLPIMKNSSVIYSCFIV*CGREVP
Trigger: CGGTACTTCCCTCCCACACCATACGATAAAGCAAGA...GTAAATGACAGAACTATTTTTCATTATGGGTAACTGGGGAATAAATGGGTCACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CCA 90 bp AACTGCAGGTATGTTGAGCACACAAGCAATCACCGTATTGTATTAGAGACATTTATACTTGCTATTTTGTaGAACACACGCACACTCGCA +
Preference number: 4 (lower is better)
Translates to: NCRYVEHTSNHRIVLETFILAIL*NTRTLA
Trigger: TGCGAGTGTGCGTGTGTTCCACAAAATAGCAAGTAT...AAATGTCTCTAATACAATACGGTGATTGCTTGTGTGCTCAACATACCTGCAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CCA 90 bp GACAAATCCAAACAGATATTCGTCAAACGAAGGAGTCACACAAATCTCCGATTTCATTACCACCAGCCATaGGTAAATAAAAACCCAGCA +
Preference number: 4 (lower is better)
Translates to: DKSKQIFVKRRSHTNLRFHYHQP*VNKNPA
Trigger: TGCTGGGTTTTTATTTACCCATGGCTGGTGGTAATG...AAATCGGAGATTTGTGTGACTCCTTCGTTTGACGAATATCTGTTTGGATTTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505140.1
3UTR CAA 72 bp TTTAGATTGTATTCATCCACAAGCAATCACTCAGTTTaGGAGAAAGTCACACCTGGTCTTTCCCTGGTCTTT +
Preference number: 4 (lower is better)
Translates to: FRLYSSTSNHSV*EKVTPGLSLVF
Trigger: AAAGACCAGGGAAAGACCAGGTGTGACTTTCTCCAAAACTGAGTGATTGCTTGTGGATGAATACAATCTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR CAA 72 bp CAGAGGTTTTTCAAAAATGATTTAGGAGGCCCACCTTaGATGCTCTTCCCAGCAGAAAGTTGCAAGTTAATA +
Preference number: 4 (lower is better)
Translates to: QRFFKNDLGGPP*MLFPAESCKLI
Trigger: TATTAACTTGCAACTTTCTGCTGGGAAGAGCATCAAAGGTGGGCCTCCTAAATCATTTTTGAAAAACCTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR TCA 90 bp AGTGACCCATTTATTCCCCAGTTACCCATAATGAAAAATAGTTCTGTCATTTACTGCTTTCCTACGGTTTaGGTGCTTTATATGAGAGCC +
Preference number: 4 (lower is better)
Translates to: SDPFIPQLPIMKNSSVIYCFPTV*VLYMRA
Trigger: GGCTCTCATATAAAGCACTCAAACCGTAGGAAAGCA...GTAAATGACAGAACTATTTTTCATTATGGGTAACTGGGGAATAAATGGGTCACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR TCA 90 bp AACTGCAGGTATGTTGAGCACACAAGCAATCACCGTATTGTATTAGAGACATTTTTTAGAGATCCTGGTTaGTTGCAAATGAAGCAGAGA +
Preference number: 4 (lower is better)
Translates to: NCRYVEHTSNHRIVLETFFRDPG*LQMKQR
Trigger: TCTCTGCTTCATTTGCAATCAACCAGGATCTCTAAA...AAATGTCTCTAATACAATACGGTGATTGCTTGTGTGCTCAACATACCTGCAGTT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR TCA 90 bp CCACTGACAGTCACGCGTCTTAAACAATCAGTAACAATTTTAAGGTACACAATGCAGTCACTGTATGTATaGTACAGCTTTCCTGTTGTT +
Preference number: 4 (lower is better)
Translates to: PLTVTRLKQSVTILRYTMQSLYV*YSFPVV
Trigger: AACAACAGGAAAGCTGTATCATACATACAGTGACTG...CATTGTGTACCTTAAAATTGTTACTGATTGTTTAAGACGCGTGACTGTCAGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646501.1
CDS-3UTR GCA 90 bp AACTGCAGGTATGTTGAGCACACAAGCAATCACCGTATTGTATTAGAGACATTTTCGTCTAGTTCTTTTTaGTCAGTTGTTGTCTCACTG +
Preference number: 4 (lower is better)
Translates to: NCRYVEHTSNHRIVLETFSSSSF*SVVVSL
Trigger: CAGTGAGACAACAACTGAGCAAAAAGAACTAGACGA...AAATGTCTCTAATACAATACGGTGATTGCTTGTGTGCTCAACATACCTGCAGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR GCA 90 bp AGTGACCCATTTATTCCCCAGTTACCCATAATGAAAAATAGTTCTGTCATTTACAGTTTCCTGCCAATGTaGAAATCCGTCAATACTCCC +
Preference number: 4 (lower is better)
Translates to: SDPFIPQLPIMKNSSVIYSFLPM*KSVNTP
Trigger: GGGAGTATTGACGGATTTGCACATTGGCAGGAAACT...GTAAATGACAGAACTATTTTTCATTATGGGTAACTGGGGAATAAATGGGTCACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284268.8
3UTR CAA 72 bp TCAGAAACTCTAACCAAATATTATGGCCCACTGATCTaGATCACTGAAGGAATCTCTGGAGTTGTATTTCCT +
Preference number: 4 (lower is better)
Translates to: SETLTKYYGPLI*ITEGISGVVFP
Trigger: AGGAAATACAACTCCAGAGATTCCTTCAGTGATCAAGATCAGTGGGCCATAATATTTGGTTAGAGTTTCTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR TCA 90 bp AGTGACCCATTTATTCCCCAGTTACCCATAATGAAAAATAGTTCTGTCATTTACCACTTCTTAAATGAATaGGTGTCGGCATGGAACAGA +
Preference number: 4 (lower is better)
Translates to: SDPFIPQLPIMKNSSVIYHFLNE*VSAWNR
Trigger: TCTGTTCCATGCCGACACTCATTCATTTAAGAAGTG...GTAAATGACAGAACTATTTTTCATTATGGGTAACTGGGGAATAAATGGGTCACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR TCA 90 bp AGTGACCCATTTATTCCCCAGTTACCCATAATGAAAAATAGTTCTGTCATTTACCTATTTCCTATGCTTTaGGCTGCCCAAACCTATTAT +
Preference number: 4 (lower is better)
Translates to: SDPFIPQLPIMKNSSVIYLFPML*AAQTYY
Trigger: ATAATAGGTTTGGGCAGCTCAAAGCATAGGAAATAG...GTAAATGACAGAACTATTTTTCATTATGGGTAACTGGGGAATAAATGGGTCACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CCA 90 bp AACTGCAGGTATGTTGAGCACACAAGCAATCACCGTATTGTATTAGAGACATTTTTTCTGAGTGGAGTTTaGGTTATTTTGATTCCACAA +
Preference number: 4 (lower is better)
Translates to: NCRYVEHTSNHRIVLETFFLSGV*VILIPQ
Trigger: TTGTGGAATCAAAATAACCCAAACTCCACTCAGAAA...AAATGTCTCTAATACAATACGGTGATTGCTTGTGTGCTCAACATACCTGCAGTT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR TCA 90 bp CAATGGGTTTATGAAGTGTCATTCACAGTGTTTTATGTAACTGGTTTCAGTAGATACACAATGGGTTTATaGAGTGTCATTCACAGTGTT +
Preference number: 4 (lower is better)
Translates to: QWVYEVSFTVFYVTGFSRYTMGL*SVIHSV
Trigger: AACACTGTGAATGACACTTCATAAACCCATTGTGTA...TCTACTGAAACCAGTTACATAAAACACTGTGAATGACACTTCATAAACCCATTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646501.1
3UTR CAA 72 bp CTTTATAAAACTGCTGCCAATAAGGTACAATGTTCATaGATACAATACGTTTCAACTGCAGGTATGTTGAGC +
Preference number: 4 (lower is better)
Translates to: LYKTAANKVQCS*IQYVSTAGMLS
Trigger: GCTCAACATACCTGCAGTTGAAACGTATTGTATCAATGAACATTGTACCTTATTGGCAGCAGTTTTATAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS CCA 90 bp GGCGGTCGGCGGCCTCACCTATCAGTGTGTGAAAGACGGCAGCGATaGCCCCTGCCACCACCATACACAGGACGGCTTTGGTCCTGTCTC +
Preference number: 5 (lower is better)
Translates to: GGRRPHLSVCERRQR*PLPPPYTGRLWSCL
Trigger: GAGACAGGACCAAAGCCGTCCTGTGTATGGTGGTGGCAGGGGCCATCGCTGCCGTCTTTCACACACTGATAGGTGAGGCCGCCGACCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513115.1
CDS CCA 90 bp GAAGGGAAGGTGGGCGGGTACAGGGTGGAGCAGGGAAGAAGCCCTTaGGGTACCCTTGTGAGGCACTGGCAGGGCACAGTGGCAACGGAA +
Preference number: 5 (lower is better)
Translates to: EGKVGGYRVEQGRSP*GTLVRHWQGTVATE
Trigger: TTCCGTTGCCACTGTGCCCTGCCAGTGCCTCACAAGGGTACCCCAAGGGCTTCTTCCCTGCTCCACCCTGTACCCGCCCACCTTCCCTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647541.1
CDS TCA 90 bp AGTACGCCAGCCCGTAGCTGGCCAGCATCTCGACTGCATCCTCCTTaGCAGCAGCAATGCCCCGGTTCAAGGCCTGCTCCCCGAAGTCGA +
Preference number: 5 (lower is better)
Translates to: STPARSWPASRLHPP*QQQCPGSRPAPRSR
Trigger: TCGACTTCGGGGAGCAGGCCTTGAACCGGGGCATTGCTGCTGTCAAGGAGGATGCAGTCGAGATGCTGGCCAGCTACGGGCTGGCGTACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284268.8
ENST00000513115.1
CDS CCA 90 bp TTTTCTGCTTCCGGTAGACATAGCACGCAGCGATGGCGACCATGGTaGATTCTCCCACAAAGCCCGCCAGGAGGGAGCCCACGCCCAGGG +
Preference number: 5 (lower is better)
Translates to: FSASGRHSTQRWRPW*ILPQSPPGGSPRPG
Trigger: CCCTGGGCGTGGGCTCCCTCCTGGCGGGCTTTGTGGGAGAATCCACCATGGTCGCCATCGCTGCGTGCTATGTCTACCGGAAGCAGAAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284268.8
ENST00000502585.1
CDS GCA 90 bp CTTCATGAGGGAGTACGCCAGCCCGTAGCTGGCCAGCATCTCGACTaGATCCTCCTTGACAGCAGCAATGCCCCGGTTCAAGGCCTGCTC +
Preference number: 5 (lower is better)
Translates to: LHEGVRQPVAGQHLD*ILLDSSNAPVQGLL
Trigger: GAGCAGGCCTTGAACCGGGGCATTGCTGCTGTCAAGGAGGATGCAGTCGAGATGCTGGCCAGCTACGGGCTGGCGTACTCCCTCATGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284268.8
ENST00000513115.1
CDS GCA 90 bp CTTCATGAGGGAGTACGCCAGCCCGTAGCTGGCCAGCATCTCGACTaGATCCTCCTTGACAGCAGCAATGCCCCGGTTCAAGGCCAGGAC +
Preference number: 5 (lower is better)
Translates to: LHEGVRQPVAGQHLD*ILLDSSNAPVQGQD
Trigger: GTCCTGGCCTTGAACCGGGGCATTGCTGCTGTCAAGGAGGATGCAGTCGAGATGCTGGCCAGCTACGGGCTGGCGTACTCCCTCATGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503389.1
CDS TCA 90 bp AGTACGCCAGCCCGTAGCTGGCCAGCATCTCGACTGCATCCTCCTTaGCAGCAGCAATGCCCCGGTTCAAGGCCAGGACTATCAGTGCTG +
Preference number: 5 (lower is better)
Translates to: STPARSWPASRLHPP*QQQCPGSRPGLSVL
Trigger: CAGCACTGATAGTCCTGGCCTTGAACCGGGGCATTGCTGCTGTCAAGGAGGATGCAGTCGAGATGCTGGCCAGCTACGGGCTGGCGTACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503389.1
CDS GCA 90 bp AATGTTCTTGTAGTAGCCCAGGCACAGGGTGGTGCAGCGCACAAGTaGGCCCATGTACAAGGAGAGGATCGGGATGAGCAGGGGCTCCCG +
Preference number: 5 (lower is better)
Translates to: NVLVVAQAQGGAAHK*AHVQGEDRDEQGLP
Trigger: CGGGAGCCCCTGCTCATCCCGATCCTCTCCTTGTACATGGGCGCACTTGTGCGCTGCACCACCCTGTGCCTGGGCTACTACAAGAACATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284268.8
ENST00000503939.5
CDS GCA 90 bp GGCGGCCTCACCTATCAGTGTGTGAAAGACGGCAGCGATGGCCCCTaGCACCACCATACACAGGACGGCTTTGGTCCTGTCTCTCTTGCT +
Preference number: 5 (lower is better)
Translates to: GGLTYQCVKDGSDGP*HHHTQDGFGPVSLA
Trigger: AGCAAGAGAGACAGGACCAAAGCCGTCCTGTGTATGGTGGTGGCAGGGGCCATCGCTGCCGTCTTTCACACACTGATAGGTGAGGCCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513115.1
CDS CCA 90 bp TCTTTTTCTGCTTCCGGTAGACATAGCACGCAGCGATGGCGACCATaGTGGATTCTCCCACAAAGCCCGCCAGGAGGGAGCCCACGCCCA +
Preference number: 5 (lower is better)
Translates to: SFSASGRHSTQRWRP*WILPQSPPGGSPRP
Trigger: TGGGCGTGGGCTCCCTCCTGGCGGGCTTTGTGGGAGAATCCACCATGGTCGCCATCGCTGCGTGCTATGTCTACCGGAAGCAGAAAAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284268.8
ENST00000502585.1
CDS-3UTR CAA 90 bp AGACAGTACCACAATACAGGAGTGCCGCTCGTCACACGCTCTGGCCACTTGGGAACACGCTCTGGCCACTaGGGACACCTGCCCATCAGG +
Preference number: 5 (lower is better)
Translates to: RQYHNTGVPLVTRSGHLGTRSGH*GHLPIR
Trigger: CCTGATGGGCAGGTGTCCCAAGTGGCCAGAGCGTGT...TCCCAAGTGGCCAGAGCGTGTGACGAGCGGCACTCCTGTATTGTGGTACTGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505140.1
CDS TCA 90 bp GTGTGGCACAATCCTTGGAGAGTTACGAAAGAGGGACAACCGGCCTaGCTGGGTGGTGGGCATGCTGGTCCCAGATCTGCCACCTGCTTG +
Preference number: 5 (lower is better)
Translates to: VWHNPWRVTKEGQPA*LGGGHAGPRSATCL
Trigger: CAAGCAGGTGGCAGATCTGGGACCAGCATGCCCACCACCCAGTCAGGCCGGTTGTCCCTCTTTCGTAACTCTCCAAGGATTGTGCCACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502585.1
CDS GCA 90 bp CAGGCTGGAGGGTGCAGTGGTACAGTCTTGGCTTACTGCAACCCCTaGCTCCTGGGGTTCAATGCAATTCTCCCACCTCAGCCTCCTGAG +
Preference number: 5 (lower is better)
Translates to: QAGGCSGTVLAYCNP*LLGFNAILPPQPPE
Trigger: CTCAGGAGGCTGAGGTGGGAGAATTGCATTGAACCCCAGGAGGCAGGGGTTGCAGTAAGCCAAGACTGTACCACTGCACCCTCCAGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647541.1
CDS GCA 90 bp TCTGTCGCCCAGGCTGGAGGGTGCAGTGGTACAGTCTTGGCTTACTaGAACCCCTGCCTCCTGGGGTTCAATGCAATTCTCCCACCTCAG +
Preference number: 5 (lower is better)
Translates to: SVAQAGGCSGTVLAY*NPCLLGFNAILPPQ
Trigger: CTGAGGTGGGAGAATTGCATTGAACCCCAGGAGGCAGGGGTTGCAGTAAGCCAAGACTGTACCACTGCACCCTCCAGCCTGGGCGACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647541.1
CDS-3UTR CAA 90 bp CCACTTGGGACACCTGCCCATCAGGGTGGCATGTCACTGCCTCCCCATCACCAACCCAAAGTGCTAGGATaGATCTCCCCAAGTGCTACG +
Preference number: 5 (lower is better)
Translates to: PLGTPAHQGGMSLPPHHQPKVLG*ISPSAT
Trigger: CGTAGCACTTGGGGAGATCAATCCTAGCACTTTGGG...TTGGTGATGGGGAGGCAGTGACATGCCACCCTGATGGGCAGGTGTCCCAAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505140.1
CDS CCA 90 bp AGACGGCAGCGATGGCCCCTGCCACCACCATACACAGGACGGCTTTaGTCCTGTCTCTCTTGCTGTTCACAAACACCAGGCCCACATTTT +
Preference number: 5 (lower is better)
Translates to: RRQRWPLPPPYTGRL*SCLSCCSQTPGPHF
Trigger: AAAATGTGGGCCTGGTGTTTGTGAACAGCAAGAGAGACAGGACCAAAGCCGTCCTGTGTATGGTGGTGGCAGGGGCCATCGCTGCCGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284268.8
ENST00000513115.1
ENST00000646501.1
CDS CCA 90 bp GGATTTCCGTCAACCAGCCGTATGGCATGTGACCCACAGGGTATGTaGCTGTCAAAATCGCCACTGCCTCTGTGGCTGCAGAACTGCCAC +
Preference number: 5 (lower is better)
Translates to: GFPSTSRMACDPQGM*LSKSPLPLWLQNCH
Trigger: GTGGCAGTTCTGCAGCCACAGAGGCAGTGGCGATTTTGACAGCCACATACCCTGTGGGTCACATGCCATACGGCTGGTTGACGGAAATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284268.8
ENST00000503939.5
ENST00000515517.1
CDS CCA 90 bp TCTCCATCTTCTTTTTCTGCTTCCGGTAGACATAGCACGCAGCGATaGCGACCATGGTGGATTCTCCCACAAAGCCCGCCAGGAGGGAGC +
Preference number: 5 (lower is better)
Translates to: SPSSFSASGRHSTQR*RPWWILPQSPPGGS
Trigger: GCTCCCTCCTGGCGGGCTTTGTGGGAGAATCCACCATGGTCGCCATCGCTGCGTGCTATGTCTACCGGAAGCAGAAAAAGAAGATGGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284268.8
ENST00000502585.1
CDS TCA 90 bp GCAGGATACACAGCACGGATTTCCGTCAACCAGCCGTATGGCATGTaGCCCACAGGGTATGTGGCTGTCAAAATCGCCACTGCCTCTGTG +
Preference number: 5 (lower is better)
Translates to: AGYTARISVNQPYGM*PTGYVAVKIATASV
Trigger: CACAGAGGCAGTGGCGATTTTGACAGCCACATACCCTGTGGGTCACATGCCATACGGCTGGTTGACGGAAATCCGTGCTGTGTATCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284268.8
ENST00000503939.5
ENST00000515517.1
CDS CCA 90 bp TTTCCACGATGTCTGTCACCTCCTCTGTCGGAGGCATGTCTGTCATaGCAGAGTCTTCCCCCTCCGTGGCCGACTCATTCTCCATCTTCT +
Preference number: 5 (lower is better)
Translates to: FPRCLSPPLSEACLS*QSLPPPWPTHSPSS
Trigger: AGAAGATGGAGAATGAGTCGGCCACGGAGGGGGAAGACTCTGCCATGACAGACATGCCTCCGACAGAGGAGGTGACAGACATCGTGGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284268.8
ENST00000502585.1
CDS-3UTR CAA 90 bp CAAACGGGAGAGTTTCCTGCCAATGTGCAAATCCGTCAATACTCCCTGAGCCATAAGGCCCTTCTCGTCTaGCTCCCCACCGACTCGTCC +
Preference number: 5 (lower is better)
Translates to: QTGEFPANVQIRQYSLSHKALLV*LPTDSS
Trigger: GGACGAGTCGGTGGGGAGCAAGACGAGAAGGGCCTT...ATGGCTCAGGGAGTATTGACGGATTTGCACATTGGCAGGAAACTCTCCCGTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CAA 90 bp CAAGTCCTGCCAAATCAGCTCCATTGTGGTGGCCTGAGTGTGGCATTGCTTCCTGCCAAATCAGCTCCATaGTGGTGGCCTGAGTGTGGC +
Preference number: 5 (lower is better)
Translates to: QVLPNQLHCGGLSVALLPAKSAP*WWPECG
Trigger: GCCACACTCAGGCCACCACAATGGAGCTGATTTGGC...AGGAAGCAATGCCACACTCAGGCCACCACAATGGAGCTGATTTGGCAGGACTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CAA 90 bp ACTCCGTGGCGGAAGGGAAATTTAAGAGGCCACCGGGGCTCCATCTCTTTGTACCAGGAGCTGCTGGCTTaGAACCGGCTGAATGTGCAA +
Preference number: 5 (lower is better)
Translates to: TPWRKGNLRGHRGSISLYQELLA*NRLNVQ
Trigger: TTGCACATTCAGCCGGTTCAAAGCCAGCAGCTCCTG...GTACAAAGAGATGGAGCCCCGGTGGCCTCTTAAATTTCCCTTCCGCCACGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CAA 90 bp ACTCCGTGGCGGAAGGGAAATTTAAGAGGCCACCGGGGCTCCATCTCTTTGTACCAAGGAGCAGCGTATTaGCCACTGCAAGGCTTGTGG +
Preference number: 5 (lower is better)
Translates to: TPWRKGNLRGHRGSISLYQGAAY*PLQGLW
Trigger: CCACAAGCCTTGCAGTGGCAAATACGCTGCTCCTTG...GTACAAAGAGATGGAGCCCCGGTGGCCTCTTAAATTTCCCTTCCGCCACGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CAA 90 bp GTCGGCATGGAACAGAATCACGTGTGTGGCTCTTGTCCACTTTCCCGAAGCCCTCGGGGTTTTGCTCTGTaGCTCAGGCTGGATTCCAAC +
Preference number: 5 (lower is better)
Translates to: VGMEQNHVCGSCPLSRSPRGFAL*LRLDSN
Trigger: GTTGGAATCCAGCCTGAGCAACAGAGCAAAACCCCG...AGGGCTTCGGGAAAGTGGACAAGAGCCACACACGTGATTCTGTTCCATGCCGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CAA 90 bp CCAATGCCCCATCGCTGGAGAGCTTGCAGCGCTAGATTTTCAATGACGCCACATGAACCTGAGGCTGCATaGGCCTTTGTACTCCCGTGC +
Preference number: 5 (lower is better)
Translates to: PMPHRWRACSARFSMTPHEPEAA*AFVLPC
Trigger: GCACGGGAGTACAAAGGCCAATGCAGCCTCAGGTTC...ATGTGGCGTCATTGAAAATCTAGCGCTGCAAGCTCTCCAGCGATGGGGCATTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505140.1
CDS TCA 90 bp ATACGATGGGAGAGGGAAGAGATGATGCCGAAGTGTCATCCTGACTaGCTGTCCCTGCAGTGCCCATGGCGTCCCGTGCCTTATTCATTC +
Preference number: 5 (lower is better)
Translates to: IRWEREEMMPKCHPD*LSLQCPWRPVPYSF
Trigger: GAATGAATAAGGCACGGGACGCCATGGGCACTGCAGGGACAGTCAGTCAGGATGACACTTCGGCATCATCTCTTCCCTCTCCCATCGTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284268.8
ENST00000502585.1
CDS TCA 90 bp CAAAATACGATGGGAGAGGGAAGAGATGATGCCGAAGTGTCATCCTaGCTGACTGTCCCTGCAGTGCCCATGGCGTCCCGTGCCTTATTC +
Preference number: 5 (lower is better)
Translates to: QNTMGEGRDDAEVSS*LTVPAVPMASRALF
Trigger: GAATAAGGCACGGGACGCCATGGGCACTGCAGGGACAGTCAGTCAGGATGACACTTCGGCATCATCTCTTCCCTCTCCCATCGTATTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284268.8
ENST00000502585.1
CDS GCA 90 bp AGGGAGGGAGGGAATGGGGTGCTGGAAAAGTCACCCTTGACAAGCTaGACACCCGACCAAATGTTTCAGGATAAAGAGGGACTCGGAGCA +
Preference number: 5 (lower is better)
Translates to: REGGNGVLEKSPLTS*TPDQMFQDKEGLGA
Trigger: TGCTCCGAGTCCCTCTTTATCCTGAAACATTTGGTCGGGTGTGCAGCTTGTCAAGGGTGACTTTTCCAGCACCCCATTCCCTCCCTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505140.1
CDS CCA 90 bp GTCGAAAGCAGGATACACAGCACGGATTTCCGTCAACCAGCCGTATaGCATGTGACCCACAGGGTATGTGGCTGTCAAAATCGCCACTGC +
Preference number: 5 (lower is better)
Translates to: VESRIHSTDFRQPAV*HVTHRVCGCQNRHC
Trigger: GCAGTGGCGATTTTGACAGCCACATACCCTGTGGGTCACATGCCATACGGCTGGTTGACGGAAATCCGTGCTGTGTATCCTGCTTTCGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284268.8
ENST00000503939.5
ENST00000515517.1
CDS-3UTR CAA 90 bp ATCGCTGTGGGGTGCTGGGTGATTGGTGTTGATGTGTACCCTGTACTCCTTTGTAAGTCGATGGCTATGTaGGTGATGCCCAGGGGCACC +
Preference number: 5 (lower is better)
Translates to: IAVGCWVIGVDVYPVLLCKSMAM*VMPRGT
Trigger: GGTGCCCCTGGGCATCACCAACATAGCCATCGACTT...ACAAAGGAGTACAGGGTACACATCAACACCAATCACCCAGCACCCCACAGCGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS GCA 90 bp ATCACTATAAGCTATCAGTGTGTGAAAGACGGCAGCGATGGCCCCTaGCACCACCATACACAGGACGGCTTTGGTCCTGTCTCTCTTGCT +
Preference number: 5 (lower is better)
Translates to: ITISYQCVKDGSDGP*HHHTQDGFGPVSLA
Trigger: AGCAAGAGAGACAGGACCAAAGCCGTCCTGTGTATGGTGGTGGCAGGGGCCATCGCTGCCGTCTTTCACACACTGATAGCTTATAGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS GCA 90 bp AGAATAAGATCCTATCAGTGTGTGAAAGACGGCAGCGATGGCCCCTaGCACCACCATACACAGGACGGCTTTGGTCCTGTCTCTCTTGCT +
Preference number: 5 (lower is better)
Translates to: RIRSYQCVKDGSDGP*HHHTQDGFGPVSLA
Trigger: AGCAAGAGAGACAGGACCAAAGCCGTCCTGTGTATGGTGGTGGCAGGGGCCATCGCTGCCGTCTTTCACACACTGATAGGATCTTATTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646501.1
CDS TCA 90 bp CCAGGTAAGCAAAGCTGTTTTAAAGCCACGACGGAAGTCATGCCCTaGAGGCTTTATCCCCACCAAGAAAGCAGCAGCAGAACTCCAGCC +
Preference number: 5 (lower is better)
Translates to: PGKQSCFKATTEVMP*RLYPHQESSSRTPA
Trigger: GGCTGGAGTTCTGCTGCTGCTTTCTTGGTGGGGATAAAGCCTTCAGGGCATGACTTCCGTCGTGGCTTTAAAACAGCTTTGCTTACCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646501.1
CDS CCA 90 bp ATCCTAAATCACTATAAGCTATCAGTGTGTGAAAGACGGCAGCGATaGCCCCTGCCACCACCATACACAGGACGGCTTTGGTCCTGTCTC +
Preference number: 5 (lower is better)
Translates to: ILNHYKLSVCERRQR*PLPPPYTGRLWSCL
Trigger: GAGACAGGACCAAAGCCGTCCTGTGTATGGTGGTGGCAGGGGCCATCGCTGCCGTCTTTCACACACTGATAGCTTATAGTGATTTAGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CAA 90 bp CTATCATTCAACCATGTCAGTTTGCTGCCCCCGGGGCATTTCAAACCAAACCTTGCTGCCGTGACTGTGTaGCTCGTGCTCACCAGTTTG +
Preference number: 5 (lower is better)
Translates to: LSFNHVSLLPPGHFKPNLAAVTV*LVLTSL
Trigger: CAAACTGGTGAGCACGAGCAACACAGTCACGGCAGC...AAGGTTTGGTTTGAAATGCCCCGGGGGCAGCAAACTGACATGGTTGAATGATAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CAA 90 bp CTCATTAAATCCAAGGAGCAGCGTATTTGCCACTGCAAGGCTTGTGGATGTGGCTTCAACCATGTCAGTTaGCTGCCCCCGGGGCATTTC +
Preference number: 5 (lower is better)
Translates to: LIKSKEQRICHCKACGCGFNHVS*LPPGHF
Trigger: GAAATGCCCCGGGGGCAGCAAACTGACATGGTTGAA...GCCACATCCACAAGCCTTGCAGTGGCAAATACGCTGCTCCTTGGATTTAATGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CAA 90 bp GCTTATCAGGACACATTCGGGATACCCCTAATCCTTACCTGGACTACGAAACAAAAGTCGATGGCTATGTaGGTGATGCCCAGGGGCACC +
Preference number: 5 (lower is better)
Translates to: AYQDTFGIPLILTWTTKQKSMAM*VMPRGT
Trigger: GGTGCCCCTGGGCATCACCAACATAGCCATCGACTT...TTGTTTCGTAGTCCAGGTAAGGATTAGGGGTATCCCGAATGTGTCCTGATAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000505140.1
CDS-3UTR CAA 90 bp GCTGTGGGGTGCTGGGTGATTGGTGTTGATGTGTACCCTGTACTCCTTTGTTACGTGCTCACCAGTTTGTaGCTGGGGTTATTCTTGTCG +
Preference number: 5 (lower is better)
Translates to: AVGCWVIGVDVYPVLLCYVLTSL*LGLFLS
Trigger: CGACAAGAATAACCCCAGCAACAAACTGGTGAGCAC...GTAACAAAGGAGTACAGGGTACACATCAACACCAATCACCCAGCACCCCACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CAA 90 bp GCTGTGGGGTGCTGGGTGATTGGTGTTGATGTGTACCCTGTACTCCTTTGTTACCTCGTGCTCACCAGTTaGTTGCTGGGGTTATTCTTG +
Preference number: 5 (lower is better)
Translates to: AVGCWVIGVDVYPVLLCYLVLTS*LLGLFL
Trigger: CAAGAATAACCCCAGCAACAAACTGGTGAGCACGAG...GTAACAAAGGAGTACAGGGTACACATCAACACCAATCACCCAGCACCCCACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CAA 90 bp GTCGGCATGGAACAGAATCACGTGTGTGGCTCTTGTCCACTTTCCCGAAGCCCTATTTTCTCAGACACGTaGGGTGTCCAAAACATCACG +
Preference number: 5 (lower is better)
Translates to: VGMEQNHVCGSCPLSRSPIFSDT*GVQNIT
Trigger: CGTGATGTTTTGGACACCCAACGTGTCTGAGAAAAT...AGGGCTTCGGGAAAGTGGACAAGAGCCACACACGTGATTCTGTTCCATGCCGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CAA 90 bp ACTCCGTGGCGGAAGGGAAATTTAAGAGGCCACCGGGGCTCCATCTCTTTGTACCACTCCACTGCAATTTaGGTTCCAAAGAAAGGTGAG +
Preference number: 5 (lower is better)
Translates to: TPWRKGNLRGHRGSISLYHSTAI*VPKKGE
Trigger: CTCACCTTTCTTTGGAACCAAAATTGCAGTGGAGTG...GTACAAAGAGATGGAGCCCCGGTGGCCTCTTAAATTTCCCTTCCGCCACGGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CAA 90 bp AGAAACGCAGGAGAATATGCCAGTTCTCAGTTTTGCCTCAAAGTTGTTAGGCTGTTGCCACTGCAAGGCTaGTGGATGTGGCAGCCCTGG +
Preference number: 5 (lower is better)
Translates to: RNAGEYASSQFCLKVVRLLPLQG*WMWQPW
Trigger: CCAGGGCTGCCACATCCACAAGCCTTGCAGTGGCAA...CAGCCTAACAACTTTGAGGCAAAACTGAGAACTGGCATATTCTCCTGCGTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS CCA 90 bp ACACACACCAGTTCAGATGAGCAGCCTGGGCTTTCTGACAACCTTTaGGGCAGCTCCAAGAAGGTAAGCCTTAAAATAGGAAAGGCTCGA +
Preference number: 5 (lower is better)
Translates to: THTSSDEQPGLSDNL*GSSKKVSLKIGKAR
Trigger: TCGAGCCTTTCCTATTTTAAGGCTTACCTTCTTGGAGCTGCCCCAAAGGTTGTCAGAAAGCCCAGGCTGCTCATCTGAACTGGTGTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647541.1
CDS-3UTR CAA 90 bp CAAACGGGAGAGTTTCCTGCCAATGTGCAAATCCGTCAATACTCCCTGAGCCATCACAGCTGCAGTCCTTaGGTTCCAAGAGGAGATTGT +
Preference number: 5 (lower is better)
Translates to: QTGEFPANVQIRQYSLSHHSCSP*VPRGDC
Trigger: ACAATCTCCTCTTGGAACCAAAGGACTGCAGCTGTG...ATGGCTCAGGGAGTATTGACGGATTTGCACATTGGCAGGAAACTCTCCCGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CAA 90 bp CAAGTCCTGCCAAATCAGCTCCATTGTGGTGGCCTGAGTGTGGCATTGCTTCCTTATGGCCCACTGATCTaGATCACTGAAGGAATCTCT +
Preference number: 5 (lower is better)
Translates to: QVLPNQLHCGGLSVALLPYGPLI*ITEGIS
Trigger: AGAGATTCCTTCAGTGATCAAGATCAGTGGGCCATA...AGGAAGCAATGCCACACTCAGGCCACCACAATGGAGCTGATTTGGCAGGACTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CAA 90 bp GCTGTGGGGTGCTGGGTGATTGGTGTTGATGTGTACCCTGTACTCCTTTGTTACGGACTGTGCACTAGTTaGATTGATGAAGACGTCGTC +
Preference number: 5 (lower is better)
Translates to: AVGCWVIGVDVYPVLLCYGLCTS*IDEDVV
Trigger: GACGACGTCTTCATCAATCAAACTAGTGCACAGTCC...GTAACAAAGGAGTACAGGGTACACATCAACACCAATCACCCAGCACCCCACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CAA 90 bp GTACCTGGGAAATCAACTTGGACGCATTATAAAACAGAATCTCCCCACCGTCACAGGCTGCATTGGCCTTaGTACTCCCGTGCTACCTCT +
Preference number: 5 (lower is better)
Translates to: VPGKSTWTHYKTESPHRHRLHWP*YSRATS
Trigger: AGAGGTAGCACGGGAGTACAAAGGCCAATGCAGCCT...GTGACGGTGGGGAGATTCTGTTTTATAATGCGTCCAAGTTGATTTCCCAGGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505140.1
CDS GCA 90 bp TTATGCCAGGTAAGCAAAGCTGTTTTAAAGCCACGACGGAAGTCATaGCCTGAAGGCTTTATCCCCACCAAGAAAGCAGCAGCAGAACTC +
Preference number: 5 (lower is better)
Translates to: LCQVSKAVLKPRRKS*PEGFIPTKKAAAEL
Trigger: GAGTTCTGCTGCTGCTTTCTTGGTGGGGATAAAGCCTTCAGGGCATGACTTCCGTCGTGGCTTTAAAACAGCTTTGCTTACCTGGCATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646501.1
CDS-3UTR CAA 90 bp GAAGAAACGCAGGAGAATATGCCAGTTCTCAGTTTTGCCTCAAAGTTGTTAGGCAGGCAGCTGTGTCTTTaGGGTTTTCGTGAGGCAGGG +
Preference number: 5 (lower is better)
Translates to: EETQENMPVLSFASKLLGRQLCL*GFREAG
Trigger: CCCTGCCTCACGAAAACCCAAAAGACACAGCTGCCT...GCCTAACAACTTTGAGGCAAAACTGAGAACTGGCATATTCTCCTGCGTTTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CAA 90 bp CTATCATTCAACCATGTCAGTTTGCTGCCCCCGGGGCATTTCAAACCAAACCTTGTACCCTGTACTCCTTaGTTACGCAAGGGTGGTTTG +
Preference number: 5 (lower is better)
Translates to: LSFNHVSLLPPGHFKPNLVPCTP*LRKGGL
Trigger: CAAACCACCCTTGCGTAACAAAGGAGTACAGGGTAC...AAGGTTTGGTTTGAAATGCCCCGGGGGCAGCAAACTGACATGGTTGAATGATAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CAA 90 bp TGTCCACTTTCCCGAAGCCCTTTGATTAACTCCTTGGCCCTACTAGCTTTAGACCTTTCCCGAAGCCCTTaGATTAACTCCTTGGCCCTA +
Preference number: 5 (lower is better)
Translates to: CPLSRSPLINSLALLALDLSRSP*INSLAL
Trigger: TAGGGCCAAGGAGTTAATCAAAGGGCTTCGGGAAAG...GTCTAAAGCTAGTAGGGCCAAGGAGTTAATCAAAGGGCTTCGGGAAAGTGGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CAA 90 bp AAACTAGAAATAAATGGTCAAGACCGGCTTATCAGGACACATTCGGGATACCCCCTGGAAAAGTCACCCTaGACAAGCTGCACACCCGAC +
Preference number: 5 (lower is better)
Translates to: KLEINGQDRLIRTHSGYPLEKSP*TSCTPD
Trigger: GTCGGGTGTGCAGCTTGTCAAGGGTGACTTTTCCAG...GGGGTATCCCGAATGTGTCCTGATAAGCCGGTCTTGACCATTTATTTCTAGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505140.1
CDS-3UTR CAA 90 bp TGTCCACTTTCCCGAAGCCCTTTGATTAACTCCTTGGCCCTACTAGCTTTAGACCGGGAAACAAAGAGGTaGACAATAGGCCGACTGATT +
Preference number: 5 (lower is better)
Translates to: CPLSRSPLINSLALLALDRETKR*TIGRLI
Trigger: AATCAGTCGGCCTATTGTCAACCTCTTTGTTTCCCG...GTCTAAAGCTAGTAGGGCCAAGGAGTTAATCAAAGGGCTTCGGGAAAGTGGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CAA 90 bp AGAAACGCAGGAGAATATGCCAGTTCTCAGTTTTGCCTCAAAGTTGTTAGGCTGACGAAGGTGAACTTCTaGATGTGGGCTGCCGTGACT +
Preference number: 5 (lower is better)
Translates to: RNAGEYASSQFCLKVVRLTKVNF*MWAAVT
Trigger: AGTCACGGCAGCCCACATCAAGAAGTTCACCTTCGT...CAGCCTAACAACTTTGAGGCAAAACTGAGAACTGGCATATTCTCCTGCGTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CAA 90 bp GCTGTGGGGTGCTGGGTGATTGGTGTTGATGTGTACCCTGTACTCCTTTGTTACAGTTTTGCCTCAAAGTaGTTAGGCTGTGACTTAAGC +
Preference number: 5 (lower is better)
Translates to: AVGCWVIGVDVYPVLLCYSFASK*LGCDLS
Trigger: GCTTAAGTCACAGCCTAACAACTTTGAGGCAAAACT...GTAACAAAGGAGTACAGGGTACACATCAACACCAATCACCCAGCACCCCACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CAA 90 bp CAAACGGGAGAGTTTCCTGCCAATGTGCAAATCCGTCAATACTCCCTGAGCCATAGCAATCACTCAGTTTaGGAGAAAGTCACACCTGGT +
Preference number: 5 (lower is better)
Translates to: QTGEFPANVQIRQYSLSHSNHSV*EKVTPG
Trigger: ACCAGGTGTGACTTTCTCCAAAACTGAGTGATTGCT...ATGGCTCAGGGAGTATTGACGGATTTGCACATTGGCAGGAAACTCTCCCGTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CAA 90 bp CTCATTAAATCCAAGGAGCAGCGTATTTGCCACTGCAAGGCTTGTGGATGTGGCAGTATCCCAGACACGTaGCTCAAAAACATGCTTTCC +
Preference number: 5 (lower is better)
Translates to: LIKSKEQRICHCKACGCGSIPDT*LKNMLS
Trigger: GGAAAGCATGTTTTTGAGCAACGTGTCTGGGATACT...GCCACATCCACAAGCCTTGCAGTGGCAAATACGCTGCTCCTTGGATTTAATGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CAA 90 bp GTCCTGGGCACTGTTCTGCTGGGAGTTACTGAAGTAGAAAGATTTTTAAATACATCACGTGTGTGGCTCTaGTCCACTTTCCCGAAGCCC +
Preference number: 5 (lower is better)
Translates to: VLGTVLLGVTEVERFLNTSRVWL*STFPKP
Trigger: GGGCTTCGGGAAAGTGGACAAGAGCCACACACGTGA...TGTATTTAAAAATCTTTCTACTTCAGTAACTCCCAGCAGAACAGTGCCCAGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CAA 90 bp CCAATGCCCCATCGCTGGAGAGCTTGCAGCGCTAGATTTTCAATGACGCCACATTTGCCCAGCCTAACTTaGCATTTCTTAATCATCTCA +
Preference number: 5 (lower is better)
Translates to: PMPHRWRACSARFSMTPHLPSLT*HFLIIS
Trigger: TGAGATGATTAAGAAATGCAAAGTTAGGCTGGGCAA...ATGTGGCGTCATTGAAAATCTAGCGCTGCAAGCTCTCCAGCGATGGGGCATTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505140.1
CDS-3UTR CAA 90 bp CTATCATTCAACCATGTCAGTTTGCTGCCCCCGGGGCATTTCAAACCAAACCTTTTGCTGGGGTTATTCTaGTCGAAAGCAGGATACACA +
Preference number: 5 (lower is better)
Translates to: LSFNHVSLLPPGHFKPNLLLGLF*SKAGYT
Trigger: TGTGTATCCTGCTTTCGACAAGAATAACCCCAGCAA...AAGGTTTGGTTTGAAATGCCCCGGGGGCAGCAAACTGACATGGTTGAATGATAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CAA 90 bp CAAACGGGAGAGTTTCCTGCCAATGTGCAAATCCGTCAATACTCCCTGAGCCATAGAATTTCCATGAGGTaGTACAGTGAGTGGTACAAC +
Preference number: 5 (lower is better)
Translates to: QTGEFPANVQIRQYSLSHRISMR*YSEWYN
Trigger: GTTGTACCACTCACTGTACAACCTCATGGAAATTCT...ATGGCTCAGGGAGTATTGACGGATTTGCACATTGGCAGGAAACTCTCCCGTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CAA 90 bp GTCCTGGGCACTGTTCTGCTGGGAGTTACTGAAGTAGAAAGATTTTTAAATACAACCAGGCCCACATTTTaGAAGTCACTCATGGGACCC +
Preference number: 5 (lower is better)
Translates to: VLGTVLLGVTEVERFLNTTRPTF*KSLMGP
Trigger: GGGTCCCATGAGTGACTTCAAAAATGTGGGCCTGGT...TGTATTTAAAAATCTTTCTACTTCAGTAACTCCCAGCAGAACAGTGCCCAGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CAA 90 bp AGTGACCCATTTATTCCCCAGTTACCCATAATGAAAAATAGTTCTGTCATTTACCGGGGCTCCATCTCTTaGTACGGCCATGTGACTGGG +
Preference number: 5 (lower is better)
Translates to: SDPFIPQLPIMKNSSVIYRGSIS*YGHVTG
Trigger: CCCAGTCACATGGCCGTACAAAGAGATGGAGCCCCG...GTAAATGACAGAACTATTTTTCATTATGGGTAACTGGGGAATAAATGGGTCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CAA 90 bp AGAAACGCAGGAGAATATGCCAGTTCTCAGTTTTGCCTCAAAGTTGTTAGGCTGTCAACTGCAGGTATGTaGAGCACACAAGCAATCACC +
Preference number: 5 (lower is better)
Translates to: RNAGEYASSQFCLKVVRLSTAGM*STQAIT
Trigger: GGTGATTGCTTGTGTGCTCAACATACCTGCAGTTGA...CAGCCTAACAACTTTGAGGCAAAACTGAGAACTGGCATATTCTCCTGCGTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CAA 90 bp AGAAACGCAGGAGAATATGCCAGTTCTCAGTTTTGCCTCAAAGTTGTTAGGCTGATAATGAGGAGGCCCTaGCTGATCCTTCCTGGATTT +
Preference number: 5 (lower is better)
Translates to: RNAGEYASSQFCLKVVRLIMRRP*LILPGF
Trigger: AAATCCAGGAAGGATCAGCAAGGGCCTCCTCATTAT...CAGCCTAACAACTTTGAGGCAAAACTGAGAACTGGCATATTCTCCTGCGTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CAA 90 bp GCTGTGGGGTGCTGGGTGATTGGTGTTGATGTGTACCCTGTACTCCTTTGTTACATGATTTTAGACATTTaGCCTTTAAAAGGGCAGGCA +
Preference number: 5 (lower is better)
Translates to: AVGCWVIGVDVYPVLLCYMILDI*PLKGQA
Trigger: TGCCTGCCCTTTTAAAGGCAAAATGTCTAAAATCAT...GTAACAAAGGAGTACAGGGTACACATCAACACCAATCACCCAGCACCCCACAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS TCA 90 bp GCAAAGGAACAACACAGAGTTCTGCAAAGGCAAAGTCCACTCCGATaGTGTCTATCAAGATTTTCTCAGACACGTTGGGTGTCCAAAACA +
Preference number: 5 (lower is better)
Translates to: AKEQHRVLQRQSPLR*CLSRFSQTRWVSKT
Trigger: TGTTTTGGACACCCAACGTGTCTGAGAAAATCTTGATAGACATCATCGGAGTGGACTTTGCCTTTGCAGAACTCTGTGTTGTTCCTTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284268.8
ENST00000502585.1
CDS TCA 90 bp AAGACATCAAACAGGGTTGTGAGGAAAAAGTGTAAGCAGGTGAAATaGGCAGATCAGGTGTGGCACAATCCTTGGAGAGTTACGAAAGAG +
Preference number: 5 (lower is better)
Translates to: KTSNRVVRKKCKQVK*ADQVWHNPWRVTKE
Trigger: CTCTTTCGTAACTCTCCAAGGATTGTGCCACACCTGATCTGCTCATTTCACCTGCTTACACTTTTTCCTCACAACCCTGTTTGATGTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502585.1
CDS-3UTR CAA 90 bp GTCCTGGGCACTGTTCTGCTGGGAGTTACTGAAGTAGAAAGATTTTTAAATACAGTGAGAACTGACAGCTaGCTCAGATCTAGGAGAACG +
Preference number: 5 (lower is better)
Translates to: VLGTVLLGVTEVERFLNTVRTDS*LRSRRT
Trigger: CGTTCTCCTAGATCTGAGCAAGCTGTCAGTTCTCAC...TGTATTTAAAAATCTTTCTACTTCAGTAACTCCCAGCAGAACAGTGCCCAGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CAA 90 bp AGAAACGCAGGAGAATATGCCAGTTCTCAGTTTTGCCTCAAAGTTGTTAGGCTGTTACGCAAGGGTGGTTaGAACTTAGCTTTCAGTAGC +
Preference number: 5 (lower is better)
Translates to: RNAGEYASSQFCLKVVRLLRKGG*NLAFSS
Trigger: GCTACTGAAAGCTAAGTTCAAACCACCCTTGCGTAA...CAGCCTAACAACTTTGAGGCAAAACTGAGAACTGGCATATTCTCCTGCGTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS CCA 90 bp CACAGTGGCAACGGAAGAGACAAGATTTTATCAAAGGACATTGGCTaGCGCGGTAAACAAAGGTCTCTAGAGAATATGCCATATTGTGAA +
Preference number: 5 (lower is better)
Translates to: HSGNGRDKILSKDIG*RGKQRSLENMPYCE
Trigger: TTCACAATATGGCATATTCTCTAGAGACCTTTGTTTACCGCGCCAGCCAATGTCCTTTGATAAAATCTTGTCTCTTCCGTTGCCACTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647541.1
CDS-3UTR CAA 90 bp TATTCACCACTGACAGTCACGCGTCTTAAACAATCAGTAACAATTTTAAGGTACATACACAGGACGGCTTaGGTCCTGTCTCTCTTGCTG +
Preference number: 5 (lower is better)
Translates to: YSPLTVTRLKQSVTILRYIHRTA*VLSLLL
Trigger: CAGCAAGAGAGACAGGACCAAAGCCGTCCTGTGTAT...GTACCTTAAAATTGTTACTGATTGTTTAAGACGCGTGACTGTCAGTGGTGAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646501.1
CDS-3UTR CAA 90 bp CTATCATTCAACCATGTCAGTTTGCTGCCCCCGGGGCATTTCAAACCAAACCTTACCAGGAAACTGTATTaGTGTTTTAAGAGAATGCCA +
Preference number: 5 (lower is better)
Translates to: LSFNHVSLLPPGHFKPNLTRKLY*CFKRMP
Trigger: TGGCATTCTCTTAAAACACAAATACAGTTTCCTGGT...AAGGTTTGGTTTGAAATGCCCCGGGGGCAGCAAACTGACATGGTTGAATGATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CAA 90 bp AGTGACCCATTTATTCCCCAGTTACCCATAATGAAAAATAGTTCTGTCATTTACCAGAGGCGCCATTTCTaGCCCTGGCTTATAGCTAGG +
Preference number: 5 (lower is better)
Translates to: SDPFIPQLPIMKNSSVIYQRRHF*PWLIAR
Trigger: CCTAGCTATAAGCCAGGGCAAGAAATGGCGCCTCTG...GTAAATGACAGAACTATTTTTCATTATGGGTAACTGGGGAATAAATGGGTCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CAA 90 bp ACACAATGGGTTTATGAAGTGTCATTCACAGTGTTTTATGTAACTGGTTTCAGTACCAGGCCCACATTTTaGAAGTCACTCATGGGACCC +
Preference number: 5 (lower is better)
Translates to: TQWVYEVSFTVFYVTGFSTRPTF*KSLMGP
Trigger: GGGTCCCATGAGTGACTTCAAAAATGTGGGCCTGGT...ACTGAAACCAGTTACATAAAACACTGTGAATGACACTTCATAAACCCATTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646501.1
CDS-3UTR CAA 90 bp AGTGACCCATTTATTCCCCAGTTACCCATAATGAAAAATAGTTCTGTCATTTACATACACAGGACGGCTTaGGTCCTGTCTCTCTTGCTG +
Preference number: 5 (lower is better)
Translates to: SDPFIPQLPIMKNSSVIYIHRTA*VLSLLL
Trigger: CAGCAAGAGAGACAGGACCAAAGCCGTCCTGTGTAT...GTAAATGACAGAACTATTTTTCATTATGGGTAACTGGGGAATAAATGGGTCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CAA 90 bp AGTGACCCATTTATTCCCCAGTTACCCATAATGAAAAATAGTTCTGTCATTTACGGCCTGAGTGTGGCATaGCTTCCTGTGTTCTCAGAA +
Preference number: 5 (lower is better)
Translates to: SDPFIPQLPIMKNSSVIYGLSVA*LPVFSE
Trigger: TTCTGAGAACACAGGAAGCAATGCCACACTCAGGCC...GTAAATGACAGAACTATTTTTCATTATGGGTAACTGGGGAATAAATGGGTCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CAA 90 bp AGAAACGCAGGAGAATATGCCAGTTCTCAGTTTTGCCTCAAAGTTGTTAGGCTGTTTAAGGTGAAAGGTTaGAACAAGTCCTGCCAAATC +
Preference number: 5 (lower is better)
Translates to: RNAGEYASSQFCLKVVRLFKVKG*NKSCQI
Trigger: GATTTGGCAGGACTTGTTCAAACCTTTCACCTTAAA...CAGCCTAACAACTTTGAGGCAAAACTGAGAACTGGCATATTCTCCTGCGTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CAA 90 bp GAAGAAACGCAGGAGAATATGCCAGTTCTCAGTTTTGCCTCAAAGTTGTTAGGCTGGAACCACTTGGACTaGACAGAGGTTTTTCAAAAA +
Preference number: 5 (lower is better)
Translates to: EETQENMPVLSFASKLLGWNHLD*TEVFQK
Trigger: TTTTTGAAAAACCTCTGTCAAGTCCAAGTGGTTCCA...GCCTAACAACTTTGAGGCAAAACTGAGAACTGGCATATTCTCCTGCGTTTCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CAA 90 bp GTCCTGGGCACTGTTCTGCTGGGAGTTACTGAAGTAGAAAGATTTTTAAATACACCTTTGATTAACTCCTaGGCCCTACTAGCTTTAGAC +
Preference number: 5 (lower is better)
Translates to: VLGTVLLGVTEVERFLNTPLINS*ALLALD
Trigger: GTCTAAAGCTAGTAGGGCCAAGGAGTTAATCAAAGG...TGTATTTAAAAATCTTTCTACTTCAGTAACTCCCAGCAGAACAGTGCCCAGGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS GCA 90 bp ATTAGAGCTGAGGTTTACATAATCGCAAATTACATAATACTGCCGTaGACTAAAAACCCTTCCATAGGTGAAGCTTCACACCATCCAGTC +
Preference number: 5 (lower is better)
Translates to: IRAEVYIIANYIILP*TKNPSIGEASHHPV
Trigger: GACTGGATGGTGTGAAGCTTCACCTATGGAAGGGTTTTTAGTGCACGGCAGTATTATGTAATTTGCGATTATGTAAACCTCAGCTCTAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505140.1
CDS GCA 90 bp CAGCCTTTCATTAAATCAAGGCAAAAGGGAGGCAATATTGTGGTATaGGTCAGGTGGTTTAATGATGACACAGACTACTCTTATTTCCAC +
Preference number: 5 (lower is better)
Translates to: QPFIKSRQKGGNIVV*VRWFNDDTDYSYFH
Trigger: GTGGAAATAAGAGTAGTCTGTGTCATCATTAAACCACCTGACGCATACCACAATATTGCCTCCCTTTTGCCTTGATTTAATGAAAGGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647541.1
CDS-3UTR CAA 90 bp AGTGACCCATTTATTCCCCAGTTACCCATAATGAAAAATAGTTCTGTCATTTACTTGGTCCTGTCTCTCTaGCTGTTCACAAACACCAGG +
Preference number: 5 (lower is better)
Translates to: SDPFIPQLPIMKNSSVIYLVLSL*LFTNTR
Trigger: CCTGGTGTTTGTGAACAGCAAGAGAGACAGGACCAA...GTAAATGACAGAACTATTTTTCATTATGGGTAACTGGGGAATAAATGGGTCACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CAA 90 bp AACTGCAGGTATGTTGAGCACACAAGCAATCACCGTATTGTATTAGAGACATTTTTTTGCCTTTCCAGCTaGCACTTCTATTCCTACTCC +
Preference number: 5 (lower is better)
Translates to: NCRYVEHTSNHRIVLETFFCLSS*HFYSYS
Trigger: GGAGTAGGAATAGAAGTGCAAGCTGGAAAGGCAAAA...AAATGTCTCTAATACAATACGGTGATTGCTTGTGTGCTCAACATACCTGCAGTT
41% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CAA 90 bp AACTGCAGGTATGTTGAGCACACAAGCAATCACCGTATTGTATTAGAGACATTTTTCTCCTGGAACCACTaGGACTTGACAGAGGTTTTT +
Preference number: 5 (lower is better)
Translates to: NCRYVEHTSNHRIVLETFFSWNH*DLTEVF
Trigger: AAAAACCTCTGTCAAGTCCAAGTGGTTCCAGGAGAA...AAATGTCTCTAATACAATACGGTGATTGCTTGTGTGCTCAACATACCTGCAGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CAA 90 bp GTCCTGGGCACTGTTCTGCTGGGAGTTACTGAAGTAGAAAGATTTTTAAATACAACTATTTCCTATGCTTaGAGCTGCCCAAACCTATTA +
Preference number: 5 (lower is better)
Translates to: VLGTVLLGVTEVERFLNTTISYA*SCPNLL
Trigger: TAATAGGTTTGGGCAGCTCAAAGCATAGGAAATAGT...TGTATTTAAAAATCTTTCTACTTCAGTAACTCCCAGCAGAACAGTGCCCAGGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CAA 90 bp AACTGCAGGTATGTTGAGCACACAAGCAATCACCGTATTGTATTAGAGACATTTGTAAAGAAGCTTTATTaGGCCCCATCTGATACATCC +
Preference number: 5 (lower is better)
Translates to: NCRYVEHTSNHRIVLETFVKKLY*APSDTS
Trigger: GGATGTATCAGATGGGGCCAAATAAAGCTTCTTTAC...AAATGTCTCTAATACAATACGGTGATTGCTTGTGTGCTCAACATACCTGCAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CAA 90 bp AGTGACCCATTTATTCCCCAGTTACCCATAATGAAAAATAGTTCTGTCATTTACAAACCACTTAAACTCTaGGAGAGAGAAAGGGTGCCT +
Preference number: 5 (lower is better)
Translates to: SDPFIPQLPIMKNSSVIYKPLKL*ERERVP
Trigger: AGGCACCCTTTCTCTCTCCAAGAGTTTAAGTGGTTT...GTAAATGACAGAACTATTTTTCATTATGGGTAACTGGGGAATAAATGGGTCACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CAA 90 bp CTGACAGTCACGCGTCTTAAACAATCAGTAACAATTTTAAGGTACACAATGGGTGATACAGCTTTCCTGTaGTTTCATGGAAAGAATGCT +
Preference number: 5 (lower is better)
Translates to: LTVTRLKQSVTILRYTMGDTAFL*FHGKNA
Trigger: AGCATTCTTTCCATGAAACAACAGGAAAGCTGTATC...ACCCATTGTGTACCTTAAAATTGTTACTGATTGTTTAAGACGCGTGACTGTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646501.1
CDS-3UTR CAA 90 bp AGTGACCCATTTATTCCCCAGTTACCCATAATGAAAAATAGTTCTGTCATTTACATGCTTTCCTACGGTTaGAGTGCTTTATATGAGAGC +
Preference number: 5 (lower is better)
Translates to: SDPFIPQLPIMKNSSVIYMLSYG*SALYES
Trigger: GCTCTCATATAAAGCACTCAAACCGTAGGAAAGCAT...GTAAATGACAGAACTATTTTTCATTATGGGTAACTGGGGAATAAATGGGTCACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS-3UTR CAA 90 bp AGTGACCCATTTATTCCCCAGTTACCCATAATGAAAAATAGTTCTGTCATTTACGGAGTTTGGGTTATTTaGATTCCACAATGCAATTTC +
Preference number: 5 (lower is better)
Translates to: SDPFIPQLPIMKNSSVIYGVWVI*IPQCNF
Trigger: GAAATTGCATTGTGGAATCAAAATAACCCAAACTCC...GTAAATGACAGAACTATTTTTCATTATGGGTAACTGGGGAATAAATGGGTCACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS GCA 72 bp CCTCCTCGCGGCTGCGGCGCCTTCTCCGAGCGCGGCTaGTCTAGCAGGGGATCCGCAAGCTCAAGTCCATCC +
Preference number: 6 (lower is better)
Translates to: PPRGCGAFSERG*SSRGSASSSPS
Trigger: GGATGGACTTGAGCTTGCGGATCCCCTGCTAGAGCAGCCGCGCTCGGAGAAGGCGCCGCAGCCGCGAGGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284268.8
ENST00000505140.1
CDS CCA 72 bp GTGGGCGGGTACAGGGTGGAGCAGGGAAGAAGCCCTTaGGGTACCCTTGTGAGGCACTGGCAGGGCACAGTG +
Preference number: 6 (lower is better)
Translates to: VGGYRVEQGRSP*GTLVRHWQGTV
Trigger: CACTGTGCCCTGCCAGTGCCTCACAAGGGTACCCCAAGGGCTTCTTCCCTGCTCCACCCTGTACCCGCCCAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647541.1
CDS CAA 72 bp GGTGGGCGGGTACAGGGTGGAGCAGGGAAGAAGCCCTaGGGGTACCCTTGTGAGGCACTGGCAGGGCACAGT +
Preference number: 6 (lower is better)
Translates to: GGRVQGGAGKKP*GYPCEALAGHS
Trigger: ACTGTGCCCTGCCAGTGCCTCACAAGGGTACCCCAAGGGCTTCTTCCCTGCTCCACCCTGTACCCGCCCACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647541.1
CDS TCA 72 bp GCCCGTAGCTGGCCAGCATCTCGACTGCATCCTCCTTaGCAGCAGCAATGCCCCGGTTCAAGGCCTGCTCCC +
Preference number: 6 (lower is better)
Translates to: ARSWPASRLHPP*QQQCPGSRPAP
Trigger: GGGAGCAGGCCTTGAACCGGGGCATTGCTGCTGTCAAGGAGGATGCAGTCGAGATGCTGGCCAGCTACGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284268.8
ENST00000513115.1
CDS TCA 72 bp CGTCAGTGGCGGTCGGCGGCCTCACCTATCAGTGTGTaGAAGACGGCAGCGATGGCCCCTGCCACCACCATA +
Preference number: 6 (lower is better)
Translates to: RQWRSAASPISV*KTAAMAPATTI
Trigger: TATGGTGGTGGCAGGGGCCATCGCTGCCGTCTTTCACACACTGATAGGTGAGGCCGCCGACCGCCACTGACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513115.1
CDS CAA 90 bp AGAAGGGAAGGTGGGCGGGTACAGGGTGGAGCAGGGAAGAAGCCCTaGGGGTACCCTTGTGAGGCACTGGCAGGGCACAGTGGCAACGGA +
Preference number: 6 (lower is better)
Translates to: RREGGRVQGGAGKKP*GYPCEALAGHSGNG
Trigger: TCCGTTGCCACTGTGCCCTGCCAGTGCCTCACAAGGGTACCCCAAGGGCTTCTTCCCTGCTCCACCCTGTACCCGCCCACCTTCCCTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647541.1
CDS CCA 72 bp GCTTCCGGTAGACATAGCACGCAGCGATGGCGACCATaGTGGATTCTCCCACAAAGCCCGCCAGGAGGGAGC +
Preference number: 6 (lower is better)
Translates to: ASGRHSTQRWRP*WILPQSPPGGS
Trigger: GCTCCCTCCTGGCGGGCTTTGTGGGAGAATCCACCATGGTCGCCATCGCTGCGTGCTATGTCTACCGGAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284268.8
ENST00000502585.1
CDS TCA 72 bp GCCCGTAGCTGGCCAGCATCTCGACTGCATCCTCCTTaGCAGCAGCAATGCCCCGGTTCAAGGCCAGGACTA +
Preference number: 6 (lower is better)
Translates to: ARSWPASRLHPP*QQQCPGSRPGL
Trigger: TAGTCCTGGCCTTGAACCGGGGCATTGCTGCTGTCAAGGAGGATGCAGTCGAGATGCTGGCCAGCTACGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503389.1
CDS GCA 72 bp GGAGTACGCCAGCCCGTAGCTGGCCAGCATCTCGACTaGATCCTCCTTGACAGCAGCAATGCCCCGGTTCAA +
Preference number: 6 (lower is better)
Translates to: GVRQPVAGQHLD*ILLDSSNAPVQ
Trigger: TTGAACCGGGGCATTGCTGCTGTCAAGGAGGATGCAGTCGAGATGCTGGCCAGCTACGGGCTGGCGTACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284268.8
ENST00000503389.1
ENST00000513115.1
CDS CCA 72 bp ACACGCTTGCTCACAGCTGTATCCTCAGCAGACAGATaGGCCTGGGATCCCGCAGGGGCTCAATGCCGTGAG +
Preference number: 6 (lower is better)
Translates to: TRLLTAVSSADR*AWDPAGAQCRE
Trigger: CTCACGGCATTGAGCCCCTGCGGGATCCCAGGCCCATCTGTCTGCTGAGGATACAGCTGTGAGCAAGCGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503939.5
CDS CCA 72 bp CTGTCGCCCAGGCTGGAGGGTGCAGTGGTACAGTCTTaGCTTACTGCAACCCCTGCCTCCTGGGGTTCAATG +
Preference number: 6 (lower is better)
Translates to: LSPRLEGAVVQS*LTATPASWGSM
Trigger: CATTGAACCCCAGGAGGCAGGGGTTGCAGTAAGCCAAGACTGTACCACTGCACCCTCCAGCCTGGGCGACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647541.1
CDS TCA 72 bp GAGAGGGAAGAGATGATGCCGAAGTGTCATCCTGACTaGCTGTCCCTGCAGTGCCCATGGCGTCCCGTGCCT +
Preference number: 6 (lower is better)
Translates to: EREEMMPKCHPD*LSLQCPWRPVP
Trigger: AGGCACGGGACGCCATGGGCACTGCAGGGACAGTCAGTCAGGATGACACTTCGGCATCATCTCTTCCCTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284268.8
ENST00000502585.1
CDS CAA 72 bp GGAAAGGCGGCGAGGTACAGGAAGGCCCTTCTCGTCTaGCTCCCCACCGACTCGTCCACATGGTGCAGTTTA +
Preference number: 6 (lower is better)
Translates to: GKAARYRKALLV*LPTDSSTWCSL
Trigger: TAAACTGCACCATGTGGACGAGTCGGTGGGGAGCAAGACGAGAAGGGCCTTCCTGTACCTCGCCGCCTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS TCA 72 bp AATCCTTGGAGAGTTACGAAAGAGGGACAACCGGCCTaGCTGGGTGGTGGGCATGCTGGTCCCAGATCTGCC +
Preference number: 6 (lower is better)
Translates to: NPWRVTKEGQPA*LGGGHAGPRSA
Trigger: GGCAGATCTGGGACCAGCATGCCCACCACCCAGTCAGGCCGGTTGTCCCTCTTTCGTAACTCTCCAAGGATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502585.1
CDS GCA 72 bp AGCTATCAGTGTGTGAAAGACGGCAGCGATGGCCCCTaGCACCACCATACACAGGACGGCTTTGGTCCTGTC +
Preference number: 6 (lower is better)
Translates to: SYQCVKDGSDGP*HHHTQDGFGPV
Trigger: GACAGGACCAAAGCCGTCCTGTGTATGGTGGTGGCAGGGGCCATCGCTGCCGTCTTTCACACACTGATAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS GCA 72 bp ACCTATCAGTGTGTGAAAGACGGCAGCGATGGCCCCTaGCACCACCATACACAGGACGGCTTTGGTCCTGTC +
Preference number: 6 (lower is better)
Translates to: TYQCVKDGSDGP*HHHTQDGFGPV
Trigger: GACAGGACCAAAGCCGTCCTGTGTATGGTGGTGGCAGGGGCCATCGCTGCCGTCTTTCACACACTGATAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513115.1
CDS GCA 72 bp TCCTATCAGTGTGTGAAAGACGGCAGCGATGGCCCCTaGCACCACCATACACAGGACGGCTTTGGTCCTGTC +
Preference number: 6 (lower is better)
Translates to: SYQCVKDGSDGP*HHHTQDGFGPV
Trigger: GACAGGACCAAAGCCGTCCTGTGTATGGTGGTGGCAGGGGCCATCGCTGCCGTCTTTCACACACTGATAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646501.1
CDS CCA 72 bp TGTCTGTCACCTCCTCTGTCGGAGGCATGTCTGTCATaGCAGAGTCTTCCCCCTCCGTGGCCGACTCATTCT +
Preference number: 6 (lower is better)
Translates to: CLSPPLSEACLS*QSLPPPWPTHS
Trigger: AGAATGAGTCGGCCACGGAGGGGGAAGACTCTGCCATGACAGACATGCCTCCGACAGAGGAGGTGACAGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284268.8
ENST00000502585.1
CDS CAA 90 bp AAGACGGCAGCGATGGCCCCTGCCACCACCATACACAGGACGGCTTaGGTCCTGTCTCTCTTGCTGTTCACAAACACCAGGCCCACATTT +
Preference number: 6 (lower is better)
Translates to: KTAAMAPATTIHRTA*VLSLLLFTNTRPTF
Trigger: AAATGTGGGCCTGGTGTTTGTGAACAGCAAGAGAGACAGGACCAAAGCCGTCCTGTGTATGGTGGTGGCAGGGGCCATCGCTGCCGTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284268.8
ENST00000513115.1
ENST00000646501.1
CDS GCA 72 bp GGGTGCAGTGGTACAGTCTTGGCTTACTGCAACCCCTaGCTCCTGGGGTTCAATGCAATTCTCCCACCTCAG +
Preference number: 6 (lower is better)
Translates to: GCSGTVLAYCNP*LLGFNAILPPQ
Trigger: CTGAGGTGGGAGAATTGCATTGAACCCCAGGAGGCAGGGGTTGCAGTAAGCCAAGACTGTACCACTGCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647541.1
CDS GCA 72 bp CAGGCTGGAGGGTGCAGTGGTACAGTCTTGGCTTACTaGAACCCCTGCCTCCTGGGGTTCAATGCAATTCTC +
Preference number: 6 (lower is better)
Translates to: QAGGCSGTVLAY*NPCLLGFNAIL
Trigger: GAGAATTGCATTGAACCCCAGGAGGCAGGGGTTGCAGTAAGCCAAGACTGTACCACTGCACCCTCCAGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647541.1
CDS CCA 72 bp TCAACCAGCCGTATGGCATGTGACCCACAGGGTATGTaGCTGTCAAAATCGCCACTGCCTCTGTGGCTGCAG +
Preference number: 6 (lower is better)
Translates to: STSRMACDPQGM*LSKSPLPLWLQ
Trigger: CTGCAGCCACAGAGGCAGTGGCGATTTTGACAGCCACATACCCTGTGGGTCACATGCCATACGGCTGGTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284268.8
ENST00000503939.5
ENST00000515517.1
CDS CCA 72 bp TGTCGTGAATGTTCTTGTAGTAGCCCAGGCACAGGGTaGTGCAGCGCACAAGTGCGCCCATGTACAAGGAGA +
Preference number: 6 (lower is better)
Translates to: CRECSCSSPGTG*CSAQVRPCTRR
Trigger: TCTCCTTGTACATGGGCGCACTTGTGCGCTGCACCACCCTGTGCCTGGGCTACTACAAGAACATTCACGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284268.8
ENST00000503939.5
CDS TCA 72 bp ACAGCACGGATTTCCGTCAACCAGCCGTATGGCATGTaGCCCACAGGGTATGTGGCTGTCAAAATCGCCACT +
Preference number: 6 (lower is better)
Translates to: TARISVNQPYGM*PTGYVAVKIAT
Trigger: AGTGGCGATTTTGACAGCCACATACCCTGTGGGTCACATGCCATACGGCTGGTTGACGGAAATCCGTGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284268.8
ENST00000503939.5
ENST00000515517.1
CDS TCA 72 bp GGGAGGGAGGGAATGGGGTGCTGGAAAAGTCACCCTTaGCAAGCTGCACACCCGACCAAATGTTTCAGGATA +
Preference number: 6 (lower is better)
Translates to: GREGMGCWKSHP*QAAHPTKCFRI
Trigger: TATCCTGAAACATTTGGTCGGGTGTGCAGCTTGTCAAGGGTGACTTTTCCAGCACCCCATTCCCTCCCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505140.1
CDS GCA 72 bp CTGACTGACTGTCCCTGCAGTGCCCATGGCGTCCCGTaGCTTATTCATTCTCCTCTCTCATTTCCACGATGT +
Preference number: 6 (lower is better)
Translates to: LTDCPCSAHGVP*LIHSPLSFPRC
Trigger: ACATCGTGGAAATGAGAGAGGAGAATGAATAAGGCACGGGACGCCATGGGCACTGCAGGGACAGTCAGTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284268.8
ENST00000502585.1
CDS CAA 72 bp AGGGAGGGAGGGAATGGGGTGCTGGAAAAGTCACCCTaGACAAGCTGCACACCCGACCAAATGTTTCAGGAT +
Preference number: 6 (lower is better)
Translates to: REGGNGVLEKSP*TSCTPDQMFQD
Trigger: ATCCTGAAACATTTGGTCGGGTGTGCAGCTTGTCAAGGGTGACTTTTCCAGCACCCCATTCCCTCCCTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505140.1
CDS CAA 90 bp TCCATGAAAGGAAAGGCGGCGAGGTACAGGAAGGCCCTTCTCGTCTaGCTCCCCACCGACTCGTCCACATGGTGCAGTTTATTGATAATG +
Preference number: 6 (lower is better)
Translates to: SMKGKAARYRKALLV*LPTDSSTWCSLLIM
Trigger: CATTATCAATAAACTGCACCATGTGGACGAGTCGGTGGGGAGCAAGACGAGAAGGGCCTTCCTGTACCTCGCCGCCTTTCCTTTCATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS CAA 90 bp TCTGTGGCTGCAGAACTGCCACCAAGGTCCCGGGAAACAAAGAGGTaGACAATAGGCCGACTGATTCTCTGTGTGGCCAGAATTAGAGCC +
Preference number: 6 (lower is better)
Translates to: SVAAELPPRSRETKR*TIGRLILCVARIRA
Trigger: GGCTCTAATTCTGGCCACACAGAGAATCAGTCGGCCTATTGTCAACCTCTTTGTTTCCCGGGACCTTGGTGGCAGTTCTGCAGCCACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284268.8
ENST00000503939.5
CDS TCA 72 bp ATCCCCACCAAGAAAGCAGCAGCAGAACTCCAGCCCTaGAGGAGAGCTGCTTTTCCAGGGTCTTGGTTAAAC +
Preference number: 6 (lower is better)
Translates to: IPTKKAAAELQP*RRAAFPGSWLN
Trigger: GTTTAACCAAGACCCTGGAAAAGCAGCTCTCCTTCAGGGCTGGAGTTCTGCTGCTGCTTTCTTGGTGGGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646501.1
CDS GCA 72 bp AGCCATGCAGACGAAGGTGAACTTCTTGATGTGGGCTaGCGTGACTGTGTTGCTCGTGCTCACCAGTTTGTT +
Preference number: 6 (lower is better)
Translates to: SHADEGELLDVG*RDCVARAHQFV
Trigger: AACAAACTGGTGAGCACGAGCAACACAGTCACGGCAGCCCACATCAAGAAGTTCACCTTCGTCTGCATGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284268.8
ENST00000503939.5
ENST00000515517.1
CDS CAA 72 bp TGGGCTGCCGTGACTGTGTTGCTCGTGCTCACCAGTTaGTTGCTGGGGTTATTCTTGTCGAAAGCAGGATAC +
Preference number: 6 (lower is better)
Translates to: WAAVTVLLVLTS*LLGLFLSKAGY
Trigger: GTATCCTGCTTTCGACAAGAATAACCCCAGCAACAAACTGGTGAGCACGAGCAACACAGTCACGGCAGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284268.8
ENST00000503939.5
ENST00000515517.1
CDS CAA 72 bp GCAGGTGAAATGAGCAGATCAGGTGTGGCACAATCCTaGGAGAGTTACGAAAGAGGGACAACCGGCCTGACT +
Preference number: 6 (lower is better)
Translates to: AGEMSRSGVAQS*ESYERGTTGLT
Trigger: AGTCAGGCCGGTTGTCCCTCTTTCGTAACTCTCCAAGGATTGTGCCACACCTGATCTGCTCATTTCACCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502585.1
CDS GCA 72 bp GGGAATGGGGTGCTGGAAAAGTCACCCTTGACAAGCTaGACACCCGACCAAATGTTTCAGGATAAAGAGGGA +
Preference number: 6 (lower is better)
Translates to: GNGVLEKSPLTS*TPDQMFQDKEG
Trigger: TCCCTCTTTATCCTGAAACATTTGGTCGGGTGTGCAGCTTGTCAAGGGTGACTTTTCCAGCACCCCATTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505140.1
CDS CCA 72 bp AGGATACACAGCACGGATTTCCGTCAACCAGCCGTATaGCATGTGACCCACAGGGTATGTGGCTGTCAAAAT +
Preference number: 6 (lower is better)
Translates to: RIHSTDFRQPAV*HVTHRVCGCQN
Trigger: ATTTTGACAGCCACATACCCTGTGGGTCACATGCCATACGGCTGGTTGACGGAAATCCGTGCTGTGTATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284268.8
ENST00000503939.5
ENST00000515517.1
CDS CAA 72 bp GCTGCCGTGACTGTGTTGCTCGTGCTCACCAGTTTGTaGCTGGGGTTATTCTTGTCGAAAGCAGGATACACA +
Preference number: 6 (lower is better)
Translates to: AAVTVLLVLTSL*LGLFLSKAGYT
Trigger: TGTGTATCCTGCTTTCGACAAGAATAACCCCAGCAACAAACTGGTGAGCACGAGCAACACAGTCACGGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284268.8
ENST00000503939.5
ENST00000515517.1
CDS CAA 72 bp AAGGTGAACTTCTTGATGTGGGCTGCCGTGACTGTGTaGCTCGTGCTCACCAGTTTGTTGCTGGGGTTATTC +
Preference number: 6 (lower is better)
Translates to: KVNFLMWAAVTV*LVLTSLLLGLF
Trigger: GAATAACCCCAGCAACAAACTGGTGAGCACGAGCAACACAGTCACGGCAGCCCACATCAAGAAGTTCACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284268.8
ENST00000503939.5
ENST00000515517.1
CDS CAA 90 bp ATGCAGACGAAGGTGAACTTCTTGATGTGGGCTGCCGTGACTGTGTaGCTCGTGCTCACCAGTTTGTTGCTGGGGTTATTCTTGTCGAAA +
Preference number: 6 (lower is better)
Translates to: MQTKVNFLMWAAVTV*LVLTSLLLGLFLSK
Trigger: TTTCGACAAGAATAACCCCAGCAACAAACTGGTGAGCACGAGCAACACAGTCACGGCAGCCCACATCAAGAAGTTCACCTTCGTCTGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284268.8
ENST00000503939.5
ENST00000515517.1
CDS TCA 72 bp CAAAGCTGTTTTAAAGCCACGACGGAAGTCATGCCCTaGAGGCTTTATCCCCACCAAGAAAGCAGCAGCAGA +
Preference number: 6 (lower is better)
Translates to: QSCFKATTEVMP*RLYPHQESSSR
Trigger: TCTGCTGCTGCTTTCTTGGTGGGGATAAAGCCTTCAGGGCATGACTTCCGTCGTGGCTTTAAAACAGCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646501.1
CDS CAA 72 bp ACCACCATACACAGGACGGCTTTGGTCCTGTCTCTCTaGCTGTTCACAAACACCAGGCCCACATTTTTGAAG +
Preference number: 6 (lower is better)
Translates to: TTIHRTALVLSL*LFTNTRPTFLK
Trigger: CTTCAAAAATGTGGGCCTGGTGTTTGTGAACAGCAAGAGAGACAGGACCAAAGCCGTCCTGTGTATGGTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000284268.8
ENST00000503389.1
ENST00000513115.1
ENST00000646501.1
CDS GCA 72 bp GTAAGCAAAGCTGTTTTAAAGCCACGACGGAAGTCATaGCCTGAAGGCTTTATCCCCACCAAGAAAGCAGCA +
Preference number: 6 (lower is better)
Translates to: VSKAVLKPRRKS*PEGFIPTKKAA
Trigger: TGCTGCTTTCTTGGTGGGGATAAAGCCTTCAGGGCATGACTTCCGTCGTGGCTTTAAAACAGCTTTGCTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646501.1
CDS CCA 72 bp AGTTCAGATGAGCAGCCTGGGCTTTCTGACAACCTTTaGGGCAGCTCCAAGAAGGTAAGCCTTAAAATAGGA +
Preference number: 6 (lower is better)
Translates to: SSDEQPGLSDNL*GSSKKVSLKIG
Trigger: TCCTATTTTAAGGCTTACCTTCTTGGAGCTGCCCCAAAGGTTGTCAGAAAGCCCAGGCTGCTCATCTGAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647541.1
CDS CAA 90 bp GCTATGACATCTGAGATTGAGGCACATCCCACCAGGAAACTGTATTaGTGTTTTAAGAGAATGCCAGCATGGGTCCATGCCATTGCGTCC +
Preference number: 6 (lower is better)
Translates to: AMTSEIEAHPTRKLY*CFKRMPAWVHAIAS
Trigger: GGACGCAATGGCATGGACCCATGCTGGCATTCTCTTAAAACACAAATACAGTTTCCTGGTGGGATGTGCCTCAATCTCAGATGTCATAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS CAA 90 bp GCAAAGTCCACTCCGATGATGTCTATCAAGATTTTCTCAGACACGTaGGGTGTCCAAAACATCACGAAACAGAGCGTGAGTGACAGAGCC +
Preference number: 6 (lower is better)
Translates to: AKSTPMMSIKIFSDT*GVQNITKQSVSDRA
Trigger: GGCTCTGTCACTCACGCTCTGTTTCGTGATGTTTTGGACACCCAACGTGTCTGAGAAAATCTTGATAGACATCATCGGAGTGGACTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS TCA 72 bp CAACACAGAGTTCTGCAAAGGCAAAGTCCACTCCGATaGTGTCTATCAAGATTTTCTCAGACACGTTGGGTG +
Preference number: 6 (lower is better)
Translates to: QHRVLQRQSPLR*CLSRFSQTRWV
Trigger: CACCCAACGTGTCTGAGAAAATCTTGATAGACATCATCGGAGTGGACTTTGCCTTTGCAGAACTCTGTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284268.8
ENST00000502585.1
CDS TCA 72 bp AACAGGGTTGTGAGGAAAAAGTGTAAGCAGGTGAAATaGGCAGATCAGGTGTGGCACAATCCTTGGAGAGTT +
Preference number: 6 (lower is better)
Translates to: NRVVRKKCKQVK*ADQVWHNPWRV
Trigger: AACTCTCCAAGGATTGTGCCACACCTGATCTGCTCATTTCACCTGCTTACACTTTTTCCTCACAACCCTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502585.1
CDS GCA 72 bp GAAGGAGAAGATCCGCAAAGGAACAACACAGAGTTCTaGAAAGGCAAAGTCCACTCCGATGATGTCTATCAA +
Preference number: 6 (lower is better)
Translates to: EGEDPQRNNTEF*KGKVHSDDVYQ
Trigger: TTGATAGACATCATCGGAGTGGACTTTGCCTTTGCAGAACTCTGTGTTGTTCCTTTGCGGATCTTCTCCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284268.8
ENST00000502585.1
CDS CAA 72 bp ACTCCGATGATGTCTATCAAGATTTTCTCAGACACGTaGGGTGTCCAAAACATCACGAAACAGAGCGTGAGT +
Preference number: 6 (lower is better)
Translates to: TPMMSIKIFSDT*GVQNITKQSVS
Trigger: ACTCACGCTCTGTTTCGTGATGTTTTGGACACCCAACGTGTCTGAGAAAATCTTGATAGACATCATCGGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284268.8
CDS CCA 72 bp AACGGAAGAGACAAGATTTTATCAAAGGACATTGGCTaGCGCGGTAAACAAAGGTCTCTAGAGAATATGCCA +
Preference number: 6 (lower is better)
Translates to: NGRDKILSKDIG*RGKQRSLENMP
Trigger: TGGCATATTCTCTAGAGACCTTTGTTTACCGCGCCAGCCAATGTCCTTTGATAAAATCTTGTCTCTTCCGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647541.1
CDS CAA 90 bp CTGAAAAGAGTAAGTCAGTCTCACTCTCTCTCACCCTGCAGCATTTaGCAAAAACAATTATCATCTGACACCAGAAGGCAAAGCAAGGTT +
Preference number: 6 (lower is better)
Translates to: LKRVSQSHSLSPCSI*QKQLSSDTRRQSKV
Trigger: AACCTTGCTTTGCCTTCTGGTGTCAGATGATAATTGTTTTTGCAAAATGCTGCAGGGTGAGAGAGAGTGAGACTGACTTACTCTTTTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647541.1
CDS CAA 72 bp GAAGTGGGTCCTTTATTCCTAGACTCAAGGGCCTCCTaGAATAACAATCGTTCACATTTGAAGAAGAAAGTG +
Preference number: 6 (lower is better)
Translates to: EVGPLFLDSRAS*NNNRSHLKKKV
Trigger: CACTTTCTTCTTCAAATGTGAACGATTGTTATTCAAGGAGGCCCTTGAGTCTAGGAATAAAGGACCCACTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515517.1
CDS CAA 72 bp AGCCTTTCATTAAATCAAGGCAAAAGGGAGGCAATATaGTGGTATGCGTCAGGTGGTTTAATGATGACACAG +
Preference number: 6 (lower is better)
Translates to: SLSLNQGKREAI*WYASGGLMMTQ
Trigger: CTGTGTCATCATTAAACCACCTGACGCATACCACAATATTGCCTCCCTTTTGCCTTGATTTAATGAAAGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647541.1
CDS CAA 90 bp AGTTATGTCAGCCTTTCATTAAATCAAGGCAAAAGGGAGGCAATATaGTGGTATGCGTCAGGTGGTTTAATGATGACACAGACTACTCTT +
Preference number: 6 (lower is better)
Translates to: SYVSLSLNQGKREAI*WYASGGLMMTQTTL
Trigger: AAGAGTAGTCTGTGTCATCATTAAACCACCTGACGCATACCACAATATTGCCTCCCTTTTGCCTTGATTTAATGAAAGGCTGACATAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647541.1
CDS CAA 90 bp GTTAAACTGGAGGCCAGTCACTGTATGTATGATACAGCTTTCCTGTaGTTTCATGGAAAGAATGCTATCACAAGAGCATTTAGTCTTGTC +
Preference number: 6 (lower is better)
Translates to: VKLEASHCMYDTAFL*FHGKNAITRAFSLV
Trigger: GACAAGACTAAATGCTCTTGTGATAGCATTCTTTCCATGAAACAACAGGAAAGCTGTATCATACATACAGTGACTGGCCTCCAGTTTAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646501.1
CDS GCA 72 bp GAGGTTTACATAATCGCAAATTACATAATACTGCCGTaGACTAAAAACCCTTCCATAGGTGAAGCTTCACAC +
Preference number: 6 (lower is better)
Translates to: EVYIIANYIILP*TKNPSIGEASH
Trigger: GTGTGAAGCTTCACCTATGGAAGGGTTTTTAGTGCACGGCAGTATTATGTAATTTGCGATTATGTAAACCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505140.1
CDS GCA 72 bp ATTAAATCAAGGCAAAAGGGAGGCAATATTGTGGTATaGGTCAGGTGGTTTAATGATGACACAGACTACTCT +
Preference number: 6 (lower is better)
Translates to: IKSRQKGGNIVV*VRWFNDDTDYS
Trigger: AGAGTAGTCTGTGTCATCATTAAACCACCTGACGCATACCACAATATTGCCTCCCTTTTGCCTTGATTTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647541.1
CDS CAA 72 bp GCACACATATCTCTAACGAAAGCACCTGCTATTTTATaGGCCTTACCAAATGTTATTCCTAGATGTAATCGC +
Preference number: 6 (lower is better)
Translates to: AHISLTKAPAIL*ALPNVIPRCNR
Trigger: GCGATTACATCTAGGAATAACATTTGGTAAGGCCAATAAAATAGCAGGTGCTTTCGTTAGAGATATGTGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513115.1
CDS CAA 90 bp TACAATGACGCACACATATCTCTAACGAAAGCACCTGCTATTTTATaGGCCTTACCAAATGTTATTCCTAGATGTAATCGCCTACTAATG +
Preference number: 6 (lower is better)
Translates to: YNDAHISLTKAPAIL*ALPNVIPRCNRLLM
Trigger: CATTAGTAGGCGATTACATCTAGGAATAACATTTGGTAAGGCCAATAAAATAGCAGGTGCTTTCGTTAGAGATATGTGTGCGTCATTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513115.1
CDS CAA 72 bp TTGCTTCTCTGCAAAAACACAACTCCATTAAGTACTTaGCTTACATCAGCCATGATAATCAGGTTAGCAATG +
Preference number: 6 (lower is better)
Translates to: LLLCKNTTPLST*LTSAMIIRLAM
Trigger: CATTGCTAACCTGATTATCATGGCTGATGTAAGCAAAGTACTTAATGGAGTTGTGTTTTTGCAGAGAAGCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647541.1
CDS TCA 72 bp CTATTTTTATTCTTAAGATTTAATGACCCAGTACAATaGCGCACACATATCTCTAACGAAAGCACCTGCTAT +
Preference number: 6 (lower is better)
Translates to: LFLFLRFNDPVQ*RTHISNESTCY
Trigger: ATAGCAGGTGCTTTCGTTAGAGATATGTGTGCGTCATTGTACTGGGTCATTAAATCTTAAGAATAAAAATAG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513115.1