RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ANKAR (Homo sapiens)

Ensembl gene IDs: ENSG00000151687

Ensembl transcript IDs: ENST00000313581.4, ENST00000433782.6, ENST00000441800.5, ENST00000461516.5, ENST00000464687.1, ENST00000467927.1, ENST00000474303.5, ENST00000476208.1, ENST00000520309.5, ENST00000684021.1

Found 194 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TTTTCTTCGGTGCTCCTTCCCTCTTTTAAAGATAGGAATTATGGATaGTCCTCCATTCTTCTCCAGACTCTTCTATTCCCGAGTACAAAT +
Preference number: 1 (lower is better)
Translates to: FSSVLLPSFKDRNYG*SSILLQTLLFPSTN
Trigger: ATTTGTACTCGGGAATAGAAGAGTCTGGAGAAGAATGGAGGACCATCCATAATTCCTATCTTTAAAAGAGGGAAGGAGCACCGAAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433782.6
3UTR TCA 90 bp ATTGTTCCTAATGTGGTAAATGCTTCTGGGATACCAGCTCTAGAATaGGCCAGGCTTGCTATTAAATTCCCTGTCAAGACAATAGTAGAA +
Preference number: 1 (lower is better)
Translates to: IVPNVVNASGIPALE*ARLAIKFPVKTIVE
Trigger: TTCTACTATTGTCTTGACAGGGAATTTAATAGCAAGCCTGGCTCATTCTAGAGCTGGTATCCCAGAAGCATTTACCACATTAGGAACAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433782.6
ENST00000441800.5
3UTR-3UTR TCA 90 bp AGCCGTTGGATTGTTCCTAATGTGGTAAATGCTTCTGGGATACCAGCTCTAGAAGCCAGTACAACAATCTaGAATGCTGCCATTGCCTTC +
Preference number: 2 (lower is better)
Translates to: SRWIVPNVVNASGIPALEASTTI*NAAIAF
Trigger: GAAGGCAATGGCAGCATTTCAGATTGTTGTACTGGC...TTCTAGAGCTGGTATCCCAGAAGCATTTACCACATTAGGAACAATCCAACGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433782.6
ENST00000441800.5
3UTR-3UTR GCA 90 bp TCTCCAGACTTAAGGAAGGAAGTCCCACCAGTGTTTGTTGCATTTGAAATTCCTAGCAGAGGAACAAGCTaGACGAACCTCTTCTATTCC +
Preference number: 2 (lower is better)
Translates to: SPDLRKEVPPVFVAFEIPSRGTS*TNLFYS
Trigger: GGAATAGAAGAGGTTCGTGCAGCTTGTTCCTCTGCT...AGGAATTTCAAATGCAACAAACACTGGTGGGACTTCCTTCCTTAAGTCTGGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441800.5
3UTR-3UTR GCA 90 bp AGCCGTTGGATTGTTCCTAATGTGGTAAATGCTTCTGGGATACCAGCTCTAGAATACAACAATCTGAAATaGTGCCATTGCCTTCTCAGT +
Preference number: 2 (lower is better)
Translates to: SRWIVPNVVNASGIPALEYNNLK*CHCLLS
Trigger: ACTGAGAAGGCAATGGCAGCATTTCAGATTGTTGTA...TTCTAGAGCTGGTATCCCAGAAGCATTTACCACATTAGGAACAATCCAACGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433782.6
ENST00000441800.5
3UTR-3UTR GCA 90 bp AGCTGCACGAACCTCTTCTATTCCCGAGTACAAATGATAGCAGAGCCGTTGGATAATAGTAACACCTCTTaGAGACAAAGTAATATGGTC +
Preference number: 2 (lower is better)
Translates to: SCTNLFYSRVQMIAEPLDNSNTS*RQSNMV
Trigger: GACCATATTACTTTGTCTGCAAGAGGTGTTACTATT...ATCCAACGGCTCTGCTATCATTTGTACTCGGGAATAGAAGAGGTTCGTGCAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441800.5
3UTR-3UTR CCA 90 bp AGCTGCACGAACCTCTTCTATTCCCGAGTACAAATGATAGCAGAGCCGTTGGATGCAGACAAAGTAATATaGTCCATATCTCTAATGACT +
Preference number: 2 (lower is better)
Translates to: SCTNLFYSRVQMIAEPLDADKVI*SISLMT
Trigger: AGTCATTAGAGATATGGACCATATTACTTTGTCTGC...ATCCAACGGCTCTGCTATCATTTGTACTCGGGAATAGAAGAGGTTCGTGCAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441800.5
3UTR-3UTR CCA 90 bp TCTCCAGACTTAAGGAAGGAAGTCCCACCAGTGTTTGTTGCATTTGAAATTCCTTGTGGTAAATGCTTCTaGGATACCAGCTCTAGAATG +
Preference number: 2 (lower is better)
Translates to: SPDLRKEVPPVFVAFEIPCGKCF*DTSSRM
Trigger: CATTCTAGAGCTGGTATCCCAGAAGCATTTACCACA...AGGAATTTCAAATGCAACAAACACTGGTGGGACTTCCTTCCTTAAGTCTGGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441800.5
3UTR-3UTR CCA 90 bp TCTCCAGACTTAAGGAAGGAAGTCCCACCAGTGTTTGTTGCATTTGAAATTCCTGATAGGAATTATGGATaGTCCTCCATTCTTCTCCAG +
Preference number: 2 (lower is better)
Translates to: SPDLRKEVPPVFVAFEIPDRNYG*SSILLQ
Trigger: CTGGAGAAGAATGGAGGACCATCCATAATTCCTATC...AGGAATTTCAAATGCAACAAACACTGGTGGGACTTCCTTCCTTAAGTCTGGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441800.5
3UTR-3UTR GCA 90 bp TCTCCAGACTTAAGGAAGGAAGTCCCACCAGTGTTTGTTGCATTTGAAATTCCTAACAATCTGAAATGCTaGCATTGCCTTCTCAGTTTC +
Preference number: 2 (lower is better)
Translates to: SPDLRKEVPPVFVAFEIPNNLKC*HCLLSF
Trigger: GAAACTGAGAAGGCAATGGCAGCATTTCAGATTGTT...AGGAATTTCAAATGCAACAAACACTGGTGGGACTTCCTTCCTTAAGTCTGGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441800.5
3UTR-3UTR GCA 90 bp TTCTTCTCCAGACTCTTCTATTCCCGAGTACAAATGATAGCAGAGCCGTTGGATAATAGTAACACCTCTTaGAGACAAAGTAATATGGTC +
Preference number: 2 (lower is better)
Translates to: FFSRLFYSRVQMIAEPLDNSNTS*RQSNMV
Trigger: GACCATATTACTTTGTCTGCAAGAGGTGTTACTATT...ATCCAACGGCTCTGCTATCATTTGTACTCGGGAATAGAAGAGTCTGGAGAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433782.6
3UTR-3UTR TCA 90 bp GCTTTGAAGAGTCCCATGAAGTTAGTTACAGGAGGTAATAAAGTCAAAGAATCTATACCAGCTCTAGAATaGGCCAGGCTTGCTATTAAA +
Preference number: 2 (lower is better)
Translates to: ALKSPMKLVTGGNKVKESIPALE*ARLAIK
Trigger: TTTAATAGCAAGCCTGGCTCATTCTAGAGCTGGTAT...AGATTCTTTGACTTTATTACCTCCTGTAACTAACTTCATGGGACTCTTCAAAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433782.6
3UTR-3UTR CCA 90 bp TCCTTCCCTCTTTTAAAGATAGGAATTATGGATGGTCCTCCATTCTTCTCCAGAGCAGACAAAGTAATATaGTCCATATCTCTAATGACT +
Preference number: 2 (lower is better)
Translates to: SFPLLKIGIMDGPPFFSRADKVI*SISLMT
Trigger: AGTCATTAGAGATATGGACCATATTACTTTGTCTGC...TCTGGAGAAGAATGGAGGACCATCCATAATTCCTATCTTTAAAAGAGGGAAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433782.6
3UTR TCA 72 bp AATGTGGTAAATGCTTCTGGGATACCAGCTCTAGAATaGGCCAGGCTTGCTATTAAATTCCCTGTCAAGACA +
Preference number: 3 (lower is better)
Translates to: NVVNASGIPALE*ARLAIKFPVKT
Trigger: TGTCTTGACAGGGAATTTAATAGCAAGCCTGGCTCATTCTAGAGCTGGTATCCCAGAAGCATTTACCACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433782.6
ENST00000441800.5
3UTR CCA 72 bp CTAAAATGTTTTATTAGCCTTCTGCAGGCTCTGGGTTaGCTTTCTGGACATGTTTCCCAAGTTGGTTCAAAC +
Preference number: 3 (lower is better)
Translates to: LKCFISLLQALG*LSGHVSQVGSN
Trigger: GTTTGAACCAACTTGGGAAACATGTCCAGAAAGCCAACCCAGAGCCTGCAGAAGGCTAATAAAACATTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433782.6
CDS-3UTR TCA 90 bp AGCTGCACGAACCTCTTCTATTCCCGAGTACAAATGATAGCAGAGCCGTTGGATGCGTTCCCGTGGGGCTaGGAACAGTCGTCGCCGCCT +
Preference number: 4 (lower is better)
Translates to: SCTNLFYSRVQMIAEPLDAFPWG*EQSSPP
Trigger: AGGCGGCGACGACTGTTCTCAGCCCCACGGGAACGC...ATCCAACGGCTCTGCTATCATTTGTACTCGGGAATAGAAGAGGTTCGTGCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441800.5
CDS-3UTR GCA 90 bp AGCCGTTGGATTGTTCCTAATGTGGTAAATGCTTCTGGGATACCAGCTCTAGAACCGGGAGAGGGACGCTaGGTCCGCGGCGTTCCCGTG +
Preference number: 4 (lower is better)
Translates to: SRWIVPNVVNASGIPALEPGEGR*VRGVPV
Trigger: CACGGGAACGCCGCGGACGCAGCGTCCCTCTCCCGG...TTCTAGAGCTGGTATCCCAGAAGCATTTACCACATTAGGAACAATCCAACGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441800.5
CDS-3UTR CCA 90 bp AGCTGCACGAACCTCTTCTATTCCCGAGTACAAATGATAGCAGAGCCGTTGGATTCCAGCGGCATGCCGTaGGCACTGTGCCGCCCTCAC +
Preference number: 4 (lower is better)
Translates to: SCTNLFYSRVQMIAEPLDSSGMP*ALCRPH
Trigger: GTGAGGGCGGCACAGTGCCCACGGCATGCCGCTGGA...ATCCAACGGCTCTGCTATCATTTGTACTCGGGAATAGAAGAGGTTCGTGCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441800.5
CDS-3UTR TCA 90 bp AGCTGCACGAACCTCTTCTATTCCCGAGTACAAATGATAGCAGAGCCGTTGGATGACAGCGCCGGGCGTTaGGGCAGTCCCGAGTTGGAA +
Preference number: 4 (lower is better)
Translates to: SCTNLFYSRVQMIAEPLDDSAGR*GSPELE
Trigger: TTCCAACTCGGGACTGCCTCAACGCCCGGCGCTGTC...ATCCAACGGCTCTGCTATCATTTGTACTCGGGAATAGAAGAGGTTCGTGCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441800.5
CDS-3UTR GCA 90 bp AGCTGCACGAACCTCTTCTATTCCCGAGTACAAATGATAGCAGAGCCGTTGGATCTTAGTCCAGCGGCATaGCGTGGGCACTGTGCCGCC +
Preference number: 4 (lower is better)
Translates to: SCTNLFYSRVQMIAEPLDLSPAA*RGHCAA
Trigger: GGCGGCACAGTGCCCACGGCATGCCGCTGGACTAAG...ATCCAACGGCTCTGCTATCATTTGTACTCGGGAATAGAAGAGGTTCGTGCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441800.5
CDS-3UTR CCA 90 bp TCTCCAGACTTAAGGAAGGAAGTCCCACCAGTGTTTGTTGCATTTGAAATTCCTCTTTTCGCCCCACCGTaGCGGCCCGGCCCTCCTCGC +
Preference number: 4 (lower is better)
Translates to: SPDLRKEVPPVFVAFEIPLFAPP*RPGPPR
Trigger: GCGAGGAGGGCCGGGCCGCCACGGTGGGGCGAAAAG...AGGAATTTCAAATGCAACAAACACTGGTGGGACTTCCTTCCTTAAGTCTGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441800.5
CDS-3UTR TCA 90 bp AGCCGTTGGATTGTTCCTAATGTGGTAAATGCTTCTGGGATACCAGCTCTAGAACTTCTCGCGGGGCCTTaGATCCGCCCTCAGGGCCTC +
Preference number: 4 (lower is better)
Translates to: SRWIVPNVVNASGIPALELLAGP*IRPQGL
Trigger: GAGGCCCTGAGGGCGGATTCAAGGCCCCGCGAGAAG...TTCTAGAGCTGGTATCCCAGAAGCATTTACCACATTAGGAACAATCCAACGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441800.5
CDS-3UTR GCA 90 bp TCTCCAGACTTAAGGAAGGAAGTCCCACCAGTGTTTGTTGCATTTGAAATTCCTTCCTCGGGCGGAGCCTaGGGGCGACTAGGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: SPDLRKEVPPVFVAFEIPSSGGA*GRLGLV
Trigger: CACCAGGCCTAGTCGCCCGCAGGCTCCGCCCGAGGA...AGGAATTTCAAATGCAACAAACACTGGTGGGACTTCCTTCCTTAAGTCTGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441800.5
CDS-3UTR GCA 90 bp GTCCATATCTCTAATGACTTTAGCCAGTACAACAATCTGAAATGCTGCCATTGCCTGGGGTGGCTGGGCTaGTCCTCGGGCGGAGCCTGC +
Preference number: 4 (lower is better)
Translates to: VHISNDFSQYNNLKCCHCLGWLG*SSGGAC
Trigger: GCAGGCTCCGCCCGAGGAGCAGCCCAGCCACCCCAG...GCAATGGCAGCATTTCAGATTGTTGTACTGGCTAAAGTCATTAGAGATATGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441800.5
CDS-3UTR CCA 90 bp TCTCCAGACTTAAGGAAGGAAGTCCCACCAGTGTTTGTTGCATTTGAAATTCCTGCGGGTCGAAGCGGTTaGTCCTCCGGGCCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: SPDLRKEVPPVFVAFEIPAGRSG*SSGPWG
Trigger: ACCCCAGGGCCCGGAGGACCAACCGCTTCGACCCGC...AGGAATTTCAAATGCAACAAACACTGGTGGGACTTCCTTCCTTAAGTCTGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441800.5
CDS-3UTR GCA 90 bp GTCCATATCTCTAATGACTTTAGCCAGTACAACAATCTGAAATGCTGCCATTGCATGCCGTGGGCACTGTaGCGCCCTCACTATCTGCCT +
Preference number: 4 (lower is better)
Translates to: VHISNDFSQYNNLKCCHCMPWAL*RPHYLP
Trigger: AGGCAGATAGTGAGGGCGGCACAGTGCCCACGGCAT...GCAATGGCAGCATTTCAGATTGTTGTACTGGCTAAAGTCATTAGAGATATGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441800.5
CDS-3UTR TCA 90 bp CGGTGCTCCTTCCCTCTTTTAAAGATAGGAATTATGGATGGTCCTCCATTCTTCCATGGGAGGTCTACTTaGGAGCGCACATCCTCTTTG +
Preference number: 4 (lower is better)
Translates to: RCSFPLLKIGIMDGPPFFHGRST*ERTSSL
Trigger: CAAAGAGGATGTGCGCTCTCAAGTAGACCTCCCATG...GAAGAATGGAGGACCATCCATAATTCCTATCTTTAAAAGAGGGAAGGAGCACCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433782.6
CDS-3UTR TCA 90 bp CGGTGCTCCTTCCCTCTTTTAAAGATAGGAATTATGGATGGTCCTCCATTCTTCGTTGTGACTTGCCAGTaGTTCCACAGCCATTGCACC +
Preference number: 4 (lower is better)
Translates to: RCSFPLLKIGIMDGPPFFVVTCQ*FHSHCT
Trigger: GGTGCAATGGCTGTGGAATCACTGGCAAGTCACAAC...GAAGAATGGAGGACCATCCATAATTCCTATCTTTAAAAGAGGGAAGGAGCACCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433782.6
CDS-3UTR TCA 90 bp TCTCCAGACTTAAGGAAGGAAGTCCCACCAGTGTTTGTTGCATTTGAAATTCCTCGCACCGGAAGGAACTaGGAGGAACTTTCAGGGCTT +
Preference number: 4 (lower is better)
Translates to: SPDLRKEVPPVFVAFEIPRTGRN*EELSGL
Trigger: AAGCCCTGAAAGTTCCTCTCAGTTCCTTCCGGTGCG...AGGAATTTCAAATGCAACAAACACTGGTGGGACTTCCTTCCTTAAGTCTGGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441800.5
CDS-3UTR GCA 90 bp AGCTGCACGAACCTCTTCTATTCCCGAGTACAAATGATAGCAGAGCCGTTGGATAGCAGAGGAACAAGCTaGACGAACCTCTTCTATTCC +
Preference number: 4 (lower is better)
Translates to: SCTNLFYSRVQMIAEPLDSRGTS*TNLFYS
Trigger: GGAATAGAAGAGGTTCGTGCAGCTTGTTCCTCTGCT...ATCCAACGGCTCTGCTATCATTTGTACTCGGGAATAGAAGAGGTTCGTGCAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441800.5
CDS-3UTR CCA 90 bp CGGTGCTCCTTCCCTCTTTTAAAGATAGGAATTATGGATGGTCCTCCATTCTTCCCAGTGCTCCTGAAGTaGCAGCAAGTAACAGTGGAG +
Preference number: 4 (lower is better)
Translates to: RCSFPLLKIGIMDGPPFFPVLLK*QQVTVE
Trigger: CTCCACTGTTACTTGCTGCCACTTCAGGAGCACTGG...GAAGAATGGAGGACCATCCATAATTCCTATCTTTAAAAGAGGGAAGGAGCACCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433782.6
CDS-3UTR TCA 90 bp AGCTGCACGAACCTCTTCTATTCCCGAGTACAAATGATAGCAGAGCCGTTGGATTGTATAAGAGCGTTGTaGCTTGCCAGTGATTCCACA +
Preference number: 4 (lower is better)
Translates to: SCTNLFYSRVQMIAEPLDCIRAL*LASDST
Trigger: TGTGGAATCACTGGCAAGTCACAACGCTCTTATACA...ATCCAACGGCTCTGCTATCATTTGTACTCGGGAATAGAAGAGGTTCGTGCAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441800.5
CDS-3UTR CCA 90 bp AGCTGCACGAACCTCTTCTATTCCCGAGTACAAATGATAGCAGAGCCGTTGGATGTAACAAAGCGCCTCTaGTTGACCTTGAAGTTAGCA +
Preference number: 4 (lower is better)
Translates to: SCTNLFYSRVQMIAEPLDVTKRL*LTLKLA
Trigger: TGCTAACTTCAAGGTCAACCAGAGGCGCTTTGTTAC...ATCCAACGGCTCTGCTATCATTTGTACTCGGGAATAGAAGAGGTTCGTGCAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441800.5
CDS-3UTR CCA 90 bp TCCTTCCCTCTTTTAAAGATAGGAATTATGGATGGTCCTCCATTCTTCTCCAGAGCCTTCTGCAGGCTCTaGGTTGGCTTTCTGGACATG +
Preference number: 4 (lower is better)
Translates to: SFPLLKIGIMDGPPFFSRAFCRL*VGFLDM
Trigger: CATGTCCAGAAAGCCAACCCAGAGCCTGCAGAAGGC...TCTGGAGAAGAATGGAGGACCATCCATAATTCCTATCTTTAAAAGAGGGAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433782.6
CDS-3UTR CCA 90 bp GTCCATATCTCTAATGACTTTAGCCAGTACAACAATCTGAAATGCTGCCATTGCCAGGCTGTACAAGCATaGCACCAGCATCTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: VHISNDFSQYNNLKCCHCQAVQA*HQHLLS
Trigger: GCTGAGCAGATGCTGGTGCCATGCTTGTACAGCCTG...GCAATGGCAGCATTTCAGATTGTTGTACTGGCTAAAGTCATTAGAGATATGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433782.6
CDS-3UTR TCA 90 bp GAATTATGGATGGTCCTCCATTCTTCTCCAGACTCTTCTATTCCCGAGTACAAACAGGATCAATGTCCATaGTGGCACGCCACAATTCAG +
Preference number: 4 (lower is better)
Translates to: ELWMVLHSSPDSSIPEYKQDQCP*WHATIQ
Trigger: CTGAATTGTGGCGTGCCATCATGGACATTGATCCTG...TTTGTACTCGGGAATAGAAGAGTCTGGAGAAGAATGGAGGACCATCCATAATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433782.6
CDS-3UTR TCA 90 bp AGCCGTTGGATTGTTCCTAATGTGGTAAATGCTTCTGGGATACCAGCTCTAGAATTACTTCCAAGGACATaGCGGCCATCATCCTTCGTT +
Preference number: 4 (lower is better)
Translates to: SRWIVPNVVNASGIPALELLPRT*RPSSFV
Trigger: AACGAAGGATGATGGCCGTCATGTCCTTGGAAGTAA...TTCTAGAGCTGGTATCCCAGAAGCATTTACCACATTAGGAACAATCCAACGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433782.6
ENST00000441800.5
CDS-3UTR CCA 90 bp GTCCATATCTCTAATGACTTTAGCCAGTACAACAATCTGAAATGCTGCCATTGCCTGCAGGCTCTGGGTTaGCTTTCTGGACATGTTTCC +
Preference number: 4 (lower is better)
Translates to: VHISNDFSQYNNLKCCHCLQALG*LSGHVS
Trigger: GGAAACATGTCCAGAAAGCCAACCCAGAGCCTGCAG...GCAATGGCAGCATTTCAGATTGTTGTACTGGCTAAAGTCATTAGAGATATGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433782.6
CDS-3UTR TCA 90 bp AGCTGCACGAACCTCTTCTATTCCCGAGTACAAATGATAGCAGAGCCGTTGGATCAATTGAAGGGGTGCTaGTATCAAATTCAATTCCTC +
Preference number: 4 (lower is better)
Translates to: SCTNLFYSRVQMIAEPLDQLKGC*YQIQFL
Trigger: GAGGAATTGAATTTGATATCAGCACCCCTTCAATTG...ATCCAACGGCTCTGCTATCATTTGTACTCGGGAATAGAAGAGGTTCGTGCAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441800.5
CDS-3UTR TCA 90 bp AGCTGCACGAACCTCTTCTATTCCCGAGTACAAATGATAGCAGAGCCGTTGGATATAGAAAACAGGTATTaGATAGTGTCCAGTGCTCCT +
Preference number: 4 (lower is better)
Translates to: SCTNLFYSRVQMIAEPLDIENRY*IVSSAP
Trigger: AGGAGCACTGGACACTATTCAATACCTGTTTTCTAT...ATCCAACGGCTCTGCTATCATTTGTACTCGGGAATAGAAGAGGTTCGTGCAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441800.5
CDS-3UTR TCA 90 bp CAACAATCTGAAATGCTGCCATTGCCTTCTCAGTTTCAACTGTTGATTCAAGAAGTTGTGACTTGCCAGTaGTTCCACAGCCATTGCACC +
Preference number: 4 (lower is better)
Translates to: QQSEMLPLPSQFQLLIQEVVTCQ*FHSHCT
Trigger: GGTGCAATGGCTGTGGAATCACTGGCAAGTCACAAC...TTCTTGAATCAACAGTTGAAACTGAGAAGGCAATGGCAGCATTTCAGATTGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433782.6
ENST00000441800.5
CDS-3UTR TCA 90 bp CGGTGCTCCTTCCCTCTTTTAAAGATAGGAATTATGGATGGTCCTCCATTCTTCTGTATAAGAGCGTTGTaGCTTGCCAGTGATTCCACA +
Preference number: 4 (lower is better)
Translates to: RCSFPLLKIGIMDGPPFFCIRAL*LASDST
Trigger: TGTGGAATCACTGGCAAGTCACAACGCTCTTATACA...GAAGAATGGAGGACCATCCATAATTCCTATCTTTAAAAGAGGGAAGGAGCACCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433782.6
CDS-3UTR TCA 90 bp TTCTTCTCCAGACTCTTCTATTCCCGAGTACAAATGATAGCAGAGCCGTTGGATCCTTACTTAGAGCTATaGCAGCTTCACCTCCAACAT +
Preference number: 4 (lower is better)
Translates to: FFSRLFYSRVQMIAEPLDPYLEL*QLHLQH
Trigger: ATGTTGGAGGTGAAGCTGTCATAGCTCTAAGTAAGG...ATCCAACGGCTCTGCTATCATTTGTACTCGGGAATAGAAGAGTCTGGAGAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433782.6
CDS-3UTR TCA 90 bp ATTATGGATGGTCCTCCATTCTTCTCCAGACTCTTCTATTCCCGAGTACAAATGGCCAGTACAACAATCTaGAATGCTGCCATTGCCTTC +
Preference number: 4 (lower is better)
Translates to: IMDGPPFFSRLFYSRVQMASTTI*NAAIAF
Trigger: GAAGGCAATGGCAGCATTTCAGATTGTTGTACTGGC...CATTTGTACTCGGGAATAGAAGAGTCTGGAGAAGAATGGAGGACCATCCATAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433782.6
CDS-3UTR GCA 90 bp AGCCGTTGGATTGTTCCTAATGTGGTAAATGCTTCTGGGATACCAGCTCTAGAAGCTTCTACCAAAGCATaGACTGCACTTTTGTGGGTT +
Preference number: 4 (lower is better)
Translates to: SRWIVPNVVNASGIPALEASTKA*TALLWV
Trigger: AACCCACAAAAGTGCAGTGCATGCTTTGGTAGAAGC...TTCTAGAGCTGGTATCCCAGAAGCATTTACCACATTAGGAACAATCCAACGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433782.6
ENST00000441800.5
CDS-3UTR GCA 90 bp CGGTGCTCCTTCCCTCTTTTAAAGATAGGAATTATGGATGGTCCTCCATTCTTCACAAATGGATCCCACTaGTCTGATGACACTGAGAAG +
Preference number: 4 (lower is better)
Translates to: RCSFPLLKIGIMDGPPFFTNGSH*SDDTEK
Trigger: CTTCTCAGTGTCATCAGAGCAGTGGGATCCATTTGT...GAAGAATGGAGGACCATCCATAATTCCTATCTTTAAAAGAGGGAAGGAGCACCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433782.6
CDS-3UTR CCA 90 bp AGCCGTTGGATTGTTCCTAATGTGGTAAATGCTTCTGGGATACCAGCTCTAGAAACTCATAATTCCACATaGGAGGTCTACTTGAGAGCG +
Preference number: 4 (lower is better)
Translates to: SRWIVPNVVNASGIPALETHNST*EVYLRA
Trigger: CGCTCTCAAGTAGACCTCCCATGTGGAATTATGAGT...TTCTAGAGCTGGTATCCCAGAAGCATTTACCACATTAGGAACAATCCAACGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433782.6
CDS-3UTR CCA 90 bp TCCTTCCCTCTTTTAAAGATAGGAATTATGGATGGTCCTCCATTCTTCTCCAGAAGAGGTGTTGGACCTTaGCTGAACGTAACAAAGCGC +
Preference number: 4 (lower is better)
Translates to: SFPLLKIGIMDGPPFFSRRGVGP*LNVTKR
Trigger: GCGCTTTGTTACGTTCAGCCAAGGTCCAACACCTCT...TCTGGAGAAGAATGGAGGACCATCCATAATTCCTATCTTTAAAAGAGGGAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433782.6
CDS-3UTR CCA 90 bp GTCCATATCTCTAATGACTTTAGCCAGTACAACAATCTGAAATGCTGCCATTGCAGAGGTGTTGGACCTTaGCTGAACGTAACAAAGCGC +
Preference number: 4 (lower is better)
Translates to: VHISNDFSQYNNLKCCHCRGVGP*LNVTKR
Trigger: GCGCTTTGTTACGTTCAGCCAAGGTCCAACACCTCT...GCAATGGCAGCATTTCAGATTGTTGTACTGGCTAAAGTCATTAGAGATATGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433782.6
ENST00000441800.5
CDS-3UTR CCA 90 bp CAACAATCTGAAATGCTGCCATTGCCTTCTCAGTTTCAACTGTTGATTCAAGAACCAGTGCTCCTGAAGTaGCAGCAAGTAACAGTGGAG +
Preference number: 4 (lower is better)
Translates to: QQSEMLPLPSQFQLLIQEPVLLK*QQVTVE
Trigger: CTCCACTGTTACTTGCTGCCACTTCAGGAGCACTGG...TTCTTGAATCAACAGTTGAAACTGAGAAGGCAATGGCAGCATTTCAGATTGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433782.6
ENST00000441800.5
CDS-3UTR TCA 90 bp TTCTTCTCCAGACTCTTCTATTCCCGAGTACAAATGATAGCAGAGCCGTTGGATATTCTCGCTCTGTCTTaGCCTTGTCATCTGAAAAAG +
Preference number: 4 (lower is better)
Translates to: FFSRLFYSRVQMIAEPLDILALS*PCHLKK
Trigger: CTTTTTCAGATGACAAGGTCAAGACAGAGCGAGAAT...ATCCAACGGCTCTGCTATCATTTGTACTCGGGAATAGAAGAGTCTGGAGAAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433782.6
CDS-3UTR TCA 90 bp AGCCGTTGGATTGTTCCTAATGTGGTAAATGCTTCTGGGATACCAGCTCTAGAACAAGGCATTCTCAATTaGAGGGGTGCTGATATCAAA +
Preference number: 4 (lower is better)
Translates to: SRWIVPNVVNASGIPALEQGILN*RGADIK
Trigger: TTTGATATCAGCACCCCTTCAATTGAGAATGCCTTG...TTCTAGAGCTGGTATCCCAGAAGCATTTACCACATTAGGAACAATCCAACGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433782.6
ENST00000441800.5
CDS-3UTR TCA 90 bp ATTATGGATGGTCCTCCATTCTTCTCCAGACTCTTCTATTCCCGAGTACAAATGCACAAACCAGTAGGTTaGTTAGAGATGGAATGCCTC +
Preference number: 4 (lower is better)
Translates to: IMDGPPFFSRLFYSRVQMHKPVG*LEMECL
Trigger: GAGGCATTCCATCTCTAATCAACCTACTGGTTTGTG...CATTTGTACTCGGGAATAGAAGAGTCTGGAGAAGAATGGAGGACCATCCATAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433782.6
CDS-3UTR TCA 90 bp TCTCCAGACTTAAGGAAGGAAGTCCCACCAGTGTTTGTTGCATTTGAAATTCCTCACAAACCAGTAGGTTaGTTAGAGATGGAATGCCTC +
Preference number: 4 (lower is better)
Translates to: SPDLRKEVPPVFVAFEIPHKPVG*LEMECL
Trigger: GAGGCATTCCATCTCTAATCAACCTACTGGTTTGTG...AGGAATTTCAAATGCAACAAACACTGGTGGGACTTCCTTCCTTAAGTCTGGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441800.5
CDS-3UTR TCA 90 bp AGCCGTTGGATTGTTCCTAATGTGGTAAATGCTTCTGGGATACCAGCTCTAGAAATACCAGCTCTAGAATaGGCCAGGCTTGCTATTAAA +
Preference number: 4 (lower is better)
Translates to: SRWIVPNVVNASGIPALEIPALE*ARLAIK
Trigger: TTTAATAGCAAGCCTGGCTCATTCTAGAGCTGGTAT...TTCTAGAGCTGGTATCCCAGAAGCATTTACCACATTAGGAACAATCCAACGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433782.6
ENST00000441800.5
CDS-3UTR TCA 90 bp AGCCGTTGGATTGTTCCTAATGTGGTAAATGCTTCTGGGATACCAGCTCTAGAATTTCATGGTCTCAGCTaGAGTCCTAGGAAAACTCTT +
Preference number: 4 (lower is better)
Translates to: SRWIVPNVVNASGIPALEFHGLS*SPRKTL
Trigger: AAGAGTTTTCCTAGGACTTCAGCTGAGACCATGAAA...TTCTAGAGCTGGTATCCCAGAAGCATTTACCACATTAGGAACAATCCAACGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441800.5
CDS-3UTR GCA 90 bp GAATTATGGATGGTCCTCCATTCTTCTCCAGACTCTTCTATTCCCGAGTACAAACAAGTAACAGTGGAGTaGACTGATTCTCAGCTGTTG +
Preference number: 4 (lower is better)
Translates to: ELWMVLHSSPDSSIPEYKQVTVE*TDSQLL
Trigger: CAACAGCTGAGAATCAGTGCACTCCACTGTTACTTG...TTTGTACTCGGGAATAGAAGAGTCTGGAGAAGAATGGAGGACCATCCATAATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433782.6
CDS-3UTR GCA 90 bp TCTCCAGACTTAAGGAAGGAAGTCCCACCAGTGTTTGTTGCATTTGAAATTCCTCAAGTAACAGTGGAGTaGACTGATTCTCAGCTGTTG +
Preference number: 4 (lower is better)
Translates to: SPDLRKEVPPVFVAFEIPQVTVE*TDSQLL
Trigger: CAACAGCTGAGAATCAGTGCACTCCACTGTTACTTG...AGGAATTTCAAATGCAACAAACACTGGTGGGACTTCCTTCCTTAAGTCTGGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441800.5
CDS-3UTR GCA 90 bp CGGTGCTCCTTCCCTCTTTTAAAGATAGGAATTATGGATGGTCCTCCATTCTTCTCACCTCCAACATACTaGATTTTAGCTGATGGTGAC +
Preference number: 4 (lower is better)
Translates to: RCSFPLLKIGIMDGPPFFSPPTY*ILADGD
Trigger: GTCACCATCAGCTAAAATGCAGTATGTTGGAGGTGA...GAAGAATGGAGGACCATCCATAATTCCTATCTTTAAAAGAGGGAAGGAGCACCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433782.6
CDS-3UTR CCA 90 bp AGCCGTTGGATTGTTCCTAATGTGGTAAATGCTTCTGGGATACCAGCTCTAGAATCACTATTTCATTTATaGCTCCCCACCACTGTGTCT +
Preference number: 4 (lower is better)
Translates to: SRWIVPNVVNASGIPALESLFHL*LPTTVS
Trigger: AGACACAGTGGTGGGGAGCCATAAATGAAATAGTGA...TTCTAGAGCTGGTATCCCAGAAGCATTTACCACATTAGGAACAATCCAACGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433782.6
ENST00000441800.5
CDS-3UTR CCA 90 bp AGCCGTTGGATTGTTCCTAATGTGGTAAATGCTTCTGGGATACCAGCTCTAGAATTACGGCTAAATGTGTaGAAAACTGCAGACAACCCT +
Preference number: 4 (lower is better)
Translates to: SRWIVPNVVNASGIPALELRLNV*KTADNP
Trigger: AGGGTTGTCTGCAGTTTTCCACACATTTAGCCGTAA...TTCTAGAGCTGGTATCCCAGAAGCATTTACCACATTAGGAACAATCCAACGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433782.6
ENST00000441800.5
CDS-3UTR CCA 90 bp AGCTGCACGAACCTCTTCTATTCCCGAGTACAAATGATAGCAGAGCCGTTGGATTGCACTGCACTTTTGTaGGTTGAGATATTACTCAAT +
Preference number: 4 (lower is better)
Translates to: SCTNLFYSRVQMIAEPLDCTALL*VEILLN
Trigger: ATTGAGTAATATCTCAACCCACAAAAGTGCAGTGCA...ATCCAACGGCTCTGCTATCATTTGTACTCGGGAATAGAAGAGGTTCGTGCAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441800.5
CDS-3UTR CCA 90 bp AGCCGTTGGATTGTTCCTAATGTGGTAAATGCTTCTGGGATACCAGCTCTAGAATGTGGTAAATGCTTCTaGGATACCAGCTCTAGAATG +
Preference number: 4 (lower is better)
Translates to: SRWIVPNVVNASGIPALECGKCF*DTSSRM
Trigger: CATTCTAGAGCTGGTATCCCAGAAGCATTTACCACA...TTCTAGAGCTGGTATCCCAGAAGCATTTACCACATTAGGAACAATCCAACGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433782.6
ENST00000441800.5
CDS-3UTR TCA 90 bp CAACAATCTGAAATGCTGCCATTGCCTTCTCAGTTTCAACTGTTGATTCAAGAATTACTTCCAAGGACATaGCGGCCATCATCCTTCGTT +
Preference number: 4 (lower is better)
Translates to: QQSEMLPLPSQFQLLIQELLPRT*RPSSFV
Trigger: AACGAAGGATGATGGCCGTCATGTCCTTGGAAGTAA...TTCTTGAATCAACAGTTGAAACTGAGAAGGCAATGGCAGCATTTCAGATTGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433782.6
ENST00000441800.5
CDS-3UTR TCA 90 bp GAATTATGGATGGTCCTCCATTCTTCTCCAGACTCTTCTATTCCCGAGTACAAAATACCAGCTCTAGAATaGGCCAGGCTTGCTATTAAA +
Preference number: 4 (lower is better)
Translates to: ELWMVLHSSPDSSIPEYKIPALE*ARLAIK
Trigger: TTTAATAGCAAGCCTGGCTCATTCTAGAGCTGGTAT...TTTGTACTCGGGAATAGAAGAGTCTGGAGAAGAATGGAGGACCATCCATAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433782.6
CDS-3UTR GCA 90 bp TTCTTCTCCAGACTCTTCTATTCCCGAGTACAAATGATAGCAGAGCCGTTGGATTACAACAATCTGAAATaGTGCCATTGCCTTCTCAGT +
Preference number: 4 (lower is better)
Translates to: FFSRLFYSRVQMIAEPLDYNNLK*CHCLLS
Trigger: ACTGAGAAGGCAATGGCAGCATTTCAGATTGTTGTA...ATCCAACGGCTCTGCTATCATTTGTACTCGGGAATAGAAGAGTCTGGAGAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433782.6
CDS-3UTR GCA 90 bp AGCTGCACGAACCTCTTCTATTCCCGAGTACAAATGATAGCAGAGCCGTTGGATAAATATCCAACATACTaGATTTTAGCTGATGGTGAC +
Preference number: 4 (lower is better)
Translates to: SCTNLFYSRVQMIAEPLDKYPTY*ILADGD
Trigger: GTCACCATCAGCTAAAATGCAGTATGTTGGATATTT...ATCCAACGGCTCTGCTATCATTTGTACTCGGGAATAGAAGAGGTTCGTGCAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441800.5
CDS-3UTR CCA 90 bp ATTATGGATGGTCCTCCATTCTTCTCCAGACTCTTCTATTCCCGAGTACAAATGTCAGTAGGATTGCAGTaGAGAAGCCTACGTTATTCA +
Preference number: 4 (lower is better)
Translates to: IMDGPPFFSRLFYSRVQMSVGLQ*RSLRYS
Trigger: TGAATAACGTAGGCTTCTCCACTGCAATCCTACTGA...CATTTGTACTCGGGAATAGAAGAGTCTGGAGAAGAATGGAGGACCATCCATAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433782.6
CDS-3UTR CCA 90 bp AGCCGTTGGATTGTTCCTAATGTGGTAAATGCTTCTGGGATACCAGCTCTAGAAGTTGGGATCATATGTTaGATCTTCATTCACGTCTTC +
Preference number: 4 (lower is better)
Translates to: SRWIVPNVVNASGIPALEVGIIC*IFIHVF
Trigger: GAAGACGTGAATGAAGATCCAACATATGATCCCAAC...TTCTAGAGCTGGTATCCCAGAAGCATTTACCACATTAGGAACAATCCAACGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433782.6
ENST00000441800.5
CDS-3UTR CCA 90 bp CGGTGCTCCTTCCCTCTTTTAAAGATAGGAATTATGGATGGTCCTCCATTCTTCTTTCTTCAGGGCTGTTaGGATCATATGTTGGATCTT +
Preference number: 4 (lower is better)
Translates to: RCSFPLLKIGIMDGPPFFFLQGC*DHMLDL
Trigger: AAGATCCAACATATGATCCCAACAGCCCTGAAGAAA...GAAGAATGGAGGACCATCCATAATTCCTATCTTTAAAAGAGGGAAGGAGCACCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433782.6
CDS-3UTR CCA 90 bp AGCCGTTGGATTGTTCCTAATGTGGTAAATGCTTCTGGGATACCAGCTCTAGAATTTCTTCAGGGCTGTTaGGATCATATGTTGGATCTT +
Preference number: 4 (lower is better)
Translates to: SRWIVPNVVNASGIPALEFLQGC*DHMLDL
Trigger: AAGATCCAACATATGATCCCAACAGCCCTGAAGAAA...TTCTAGAGCTGGTATCCCAGAAGCATTTACCACATTAGGAACAATCCAACGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433782.6
ENST00000441800.5
CDS-3UTR CCA 90 bp ATTATGGATGGTCCTCCATTCTTCTCCAGACTCTTCTATTCCCGAGTACAAATGTTGAGCATCTGTCAGTaGAAGTCTTTTCAGTCTCAG +
Preference number: 4 (lower is better)
Translates to: IMDGPPFFSRLFYSRVQMLSICQ*KSFQSQ
Trigger: CTGAGACTGAAAAGACTTCCACTGACAGATGCTCAA...CATTTGTACTCGGGAATAGAAGAGTCTGGAGAAGAATGGAGGACCATCCATAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433782.6
CDS-3UTR CCA 90 bp TCTCCAGACTTAAGGAAGGAAGTCCCACCAGTGTTTGTTGCATTTGAAATTCCTTTGAGCATCTGTCAGTaGAAGTCTTTTCAGTCTCAG +
Preference number: 4 (lower is better)
Translates to: SPDLRKEVPPVFVAFEIPLSICQ*KSFQSQ
Trigger: CTGAGACTGAAAAGACTTCCACTGACAGATGCTCAA...AGGAATTTCAAATGCAACAAACACTGGTGGGACTTCCTTCCTTAAGTCTGGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441800.5
CDS-3UTR CCA 90 bp TCTCCAGACTTAAGGAAGGAAGTCCCACCAGTGTTTGTTGCATTTGAAATTCCTTTACGGCTAAATGTGTaGAAAACTGCAGACAACCCT +
Preference number: 4 (lower is better)
Translates to: SPDLRKEVPPVFVAFEIPLRLNV*KTADNP
Trigger: AGGGTTGTCTGCAGTTTTCCACACATTTAGCCGTAA...AGGAATTTCAAATGCAACAAACACTGGTGGGACTTCCTTCCTTAAGTCTGGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441800.5
CDS-3UTR CCA 90 bp GAATTATGGATGGTCCTCCATTCTTCTCCAGACTCTTCTATTCCCGAGTACAAATGTGGTAAATGCTTCTaGGATACCAGCTCTAGAATG +
Preference number: 4 (lower is better)
Translates to: ELWMVLHSSPDSSIPEYKCGKCF*DTSSRM
Trigger: CATTCTAGAGCTGGTATCCCAGAAGCATTTACCACA...TTTGTACTCGGGAATAGAAGAGTCTGGAGAAGAATGGAGGACCATCCATAATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433782.6
CDS-3UTR TCA 90 bp AGCCGTTGGATTGTTCCTAATGTGGTAAATGCTTCTGGGATACCAGCTCTAGAAGCATGTAGTCAATATTaGTCAGAATTTGCCCAATTC +
Preference number: 4 (lower is better)
Translates to: SRWIVPNVVNASGIPALEACSQY*SEFAQF
Trigger: GAATTGGGCAAATTCTGATCAATATTGACTACATGC...TTCTAGAGCTGGTATCCCAGAAGCATTTACCACATTAGGAACAATCCAACGGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433782.6
CDS-3UTR TCA 90 bp ATTATGGATGGTCCTCCATTCTTCTCCAGACTCTTCTATTCCCGAGTACAAATGCAATTGAAGGGGTGCTaGTATCAAATTCAATTCCTC +
Preference number: 4 (lower is better)
Translates to: IMDGPPFFSRLFYSRVQMQLKGC*YQIQFL
Trigger: GAGGAATTGAATTTGATATCAGCACCCCTTCAATTG...CATTTGTACTCGGGAATAGAAGAGTCTGGAGAAGAATGGAGGACCATCCATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433782.6
CDS-3UTR TCA 90 bp AGCCGTTGGATTGTTCCTAATGTGGTAAATGCTTCTGGGATACCAGCTCTAGAAAATTGTTCATGTAATTaGGCATCTGTCAGTGGAAGT +
Preference number: 4 (lower is better)
Translates to: SRWIVPNVVNASGIPALENCSCN*ASVSGS
Trigger: ACTTCCACTGACAGATGCTCAATTACATGAACAATT...TTCTAGAGCTGGTATCCCAGAAGCATTTACCACATTAGGAACAATCCAACGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433782.6
ENST00000441800.5
CDS-3UTR GCA 90 bp CAACAATCTGAAATGCTGCCATTGCCTTCTCAGTTTCAACTGTTGATTCAAGAAGCTTCTACCAAAGCATaGACTGCACTTTTGTGGGTT +
Preference number: 4 (lower is better)
Translates to: QQSEMLPLPSQFQLLIQEASTKA*TALLWV
Trigger: AACCCACAAAAGTGCAGTGCATGCTTTGGTAGAAGC...TTCTTGAATCAACAGTTGAAACTGAGAAGGCAATGGCAGCATTTCAGATTGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433782.6
ENST00000441800.5
CDS-3UTR GCA 90 bp ATTATGGATGGTCCTCCATTCTTCTCCAGACTCTTCTATTCCCGAGTACAAATGAACAATCTGAAATGCTaGCATTGCCTTCTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: IMDGPPFFSRLFYSRVQMNNLKC*HCLLSF
Trigger: GAAACTGAGAAGGCAATGGCAGCATTTCAGATTGTT...CATTTGTACTCGGGAATAGAAGAGTCTGGAGAAGAATGGAGGACCATCCATAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433782.6
CDS-3UTR CCA 90 bp AGCCGTTGGATTGTTCCTAATGTGGTAAATGCTTCTGGGATACCAGCTCTAGAAGAATTTGCCCAATTCTaGTATCATAATAAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: SRWIVPNVVNASGIPALEEFAQF*YHNKLE
Trigger: CTCCAGCTTATTATGATACCAGAATTGGGCAAATTC...TTCTAGAGCTGGTATCCCAGAAGCATTTACCACATTAGGAACAATCCAACGGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433782.6
CDS-3UTR CCA 90 bp TTCTTCTCCAGACTCTTCTATTCCCGAGTACAAATGATAGCAGAGCCGTTGGATTCTTCCATAAATAAATaGAGGCAATTCTCGCTCTGT +
Preference number: 4 (lower is better)
Translates to: FFSRLFYSRVQMIAEPLDSSINK*RQFSLC
Trigger: ACAGAGCGAGAATTGCCTCCATTTATTTATGGAAGA...ATCCAACGGCTCTGCTATCATTTGTACTCGGGAATAGAAGAGTCTGGAGAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433782.6
CDS-3UTR CCA 90 bp GTCCATATCTCTAATGACTTTAGCCAGTACAACAATCTGAAATGCTGCCATTGCTCACTATTTCATTTATaGCTCCCCACCACTGTGTCT +
Preference number: 4 (lower is better)
Translates to: VHISNDFSQYNNLKCCHCSLFHL*LPTTVS
Trigger: AGACACAGTGGTGGGGAGCCATAAATGAAATAGTGA...GCAATGGCAGCATTTCAGATTGTTGTACTGGCTAAAGTCATTAGAGATATGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433782.6
ENST00000441800.5
CDS-3UTR CCA 90 bp TCCTTCCCTCTTTTAAAGATAGGAATTATGGATGGTCCTCCATTCTTCTCCAGAGATAGGAATTATGGATaGTCCTCCATTCTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: SFPLLKIGIMDGPPFFSRDRNYG*SSILLQ
Trigger: CTGGAGAAGAATGGAGGACCATCCATAATTCCTATC...TCTGGAGAAGAATGGAGGACCATCCATAATTCCTATCTTTAAAAGAGGGAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433782.6
CDS-3UTR TCA 90 bp CAACAATCTGAAATGCTGCCATTGCCTTCTCAGTTTCAACTGTTGATTCAAGAACAAGGCATTCTCAATTaGAGGGGTGCTGATATCAAA +
Preference number: 4 (lower is better)
Translates to: QQSEMLPLPSQFQLLIQEQGILN*RGADIK
Trigger: TTTGATATCAGCACCCCTTCAATTGAGAATGCCTTG...TTCTTGAATCAACAGTTGAAACTGAGAAGGCAATGGCAGCATTTCAGATTGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433782.6
ENST00000441800.5
CDS-3UTR TCA 90 bp GAATTATGGATGGTCCTCCATTCTTCTCCAGACTCTTCTATTCCCGAGTACAAAAATTGTTCATGTAATTaGGCATCTGTCAGTGGAAGT +
Preference number: 4 (lower is better)
Translates to: ELWMVLHSSPDSSIPEYKNCSCN*ASVSGS
Trigger: ACTTCCACTGACAGATGCTCAATTACATGAACAATT...TTTGTACTCGGGAATAGAAGAGTCTGGAGAAGAATGGAGGACCATCCATAATTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433782.6
CDS-3UTR TCA 90 bp TCTCCAGACTTAAGGAAGGAAGTCCCACCAGTGTTTGTTGCATTTGAAATTCCTCTTCATCTGAAACATTaGTTGTTGAGCTTGAGGTTT +
Preference number: 4 (lower is better)
Translates to: SPDLRKEVPPVFVAFEIPLHLKH*LLSLRF
Trigger: AAACCTCAAGCTCAACAATCAATGTTTCAGATGAAG...AGGAATTTCAAATGCAACAAACACTGGTGGGACTTCCTTCCTTAAGTCTGGAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441800.5
CDS-3UTR TCA 90 bp GTCCATATCTCTAATGACTTTAGCCAGTACAACAATCTGAAATGCTGCCATTGCCAATATCATATAGAATaGCAGCACAGCGAGAGTGTA +
Preference number: 4 (lower is better)
Translates to: VHISNDFSQYNNLKCCHCQYHIE*QHSESV
Trigger: TACACTCTCGCTGTGCTGTCATTCTATATGATATTG...GCAATGGCAGCATTTCAGATTGTTGTACTGGCTAAAGTCATTAGAGATATGGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433782.6
ENST00000441800.5
CDS-3UTR TCA 90 bp GTCCATATCTCTAATGACTTTAGCCAGTACAACAATCTGAAATGCTGCCATTGCAGCCTTCAACACATCTaGATCAGAACTCAGAAATCT +
Preference number: 4 (lower is better)
Translates to: VHISNDFSQYNNLKCCHCSLQHI*IRTQKS
Trigger: AGATTTCTGAGTTCTGATTCAGATGTGTTGAAGGCT...GCAATGGCAGCATTTCAGATTGTTGTACTGGCTAAAGTCATTAGAGATATGGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433782.6
CDS-3UTR GCA 90 bp CGGTGCTCCTTCCCTCTTTTAAAGATAGGAATTATGGATGGTCCTCCATTCTTCAATAGTAACACCTCTTaGAGACAAAGTAATATGGTC +
Preference number: 4 (lower is better)
Translates to: RCSFPLLKIGIMDGPPFFNSNTS*RQSNMV
Trigger: GACCATATTACTTTGTCTGCAAGAGGTGTTACTATT...GAAGAATGGAGGACCATCCATAATTCCTATCTTTAAAAGAGGGAAGGAGCACCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433782.6
CDS-3UTR GCA 90 bp GCTTTGAAGAGTCCCATGAAGTTAGTTACAGGAGGTAATAAAGTCAAAGAATCTGTTTTATTAGCCTTCTaGAGGCTCTGGGTTGGCTTT +
Preference number: 4 (lower is better)
Translates to: ALKSPMKLVTGGNKVKESVLLAF*RLWVGF
Trigger: AAAGCCAACCCAGAGCCTGCAGAAGGCTAATAAAAC...AGATTCTTTGACTTTATTACCTCCTGTAACTAACTTCATGGGACTCTTCAAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433782.6
CDS-3UTR CCA 90 bp TCCTTCCCTCTTTTAAAGATAGGAATTATGGATGGTCCTCCATTCTTCTCCAGAGTTGGGATCATATGTTaGATCTTCATTCACGTCTTC +
Preference number: 4 (lower is better)
Translates to: SFPLLKIGIMDGPPFFSRVGIIC*IFIHVF
Trigger: GAAGACGTGAATGAAGATCCAACATATGATCCCAAC...TCTGGAGAAGAATGGAGGACCATCCATAATTCCTATCTTTAAAAGAGGGAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433782.6
CDS-3UTR CCA 90 bp AGCCGTTGGATTGTTCCTAATGTGGTAAATGCTTCTGGGATACCAGCTCTAGAAGGACTTCATACCAAATaGAATACTCTTGCATTTCAT +
Preference number: 4 (lower is better)
Translates to: SRWIVPNVVNASGIPALEGLHTK*NTLAFH
Trigger: ATGAAATGCAAGAGTATTCCATTTGGTATGAAGTCC...TTCTAGAGCTGGTATCCCAGAAGCATTTACCACATTAGGAACAATCCAACGGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433782.6
ENST00000441800.5
CDS-3UTR CCA 90 bp GCTTTGAAGAGTCCCATGAAGTTAGTTACAGGAGGTAATAAAGTCAAAGAATCTGTAACAAAGCGCCTCTaGTTGACCTTGAAGTTAGCA +
Preference number: 4 (lower is better)
Translates to: ALKSPMKLVTGGNKVKESVTKRL*LTLKLA
Trigger: TGCTAACTTCAAGGTCAACCAGAGGCGCTTTGTTAC...AGATTCTTTGACTTTATTACCTCCTGTAACTAACTTCATGGGACTCTTCAAAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433782.6
CDS-3UTR TCA 90 bp GTCCATATCTCTAATGACTTTAGCCAGTACAACAATCTGAAATGCTGCCATTGCCTTCATCTGAAACATTaGTTGTTGAGCTTGAGGTTT +
Preference number: 4 (lower is better)
Translates to: VHISNDFSQYNNLKCCHCLHLKH*LLSLRF
Trigger: AAACCTCAAGCTCAACAATCAATGTTTCAGATGAAG...GCAATGGCAGCATTTCAGATTGTTGTACTGGCTAAAGTCATTAGAGATATGGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433782.6
ENST00000441800.5
CDS-3UTR TCA 90 bp CAACAATCTGAAATGCTGCCATTGCCTTCTCAGTTTCAACTGTTGATTCAAGAAATAGAAAACAGGTATTaGATAGTGTCCAGTGCTCCT +
Preference number: 4 (lower is better)
Translates to: QQSEMLPLPSQFQLLIQEIENRY*IVSSAP
Trigger: AGGAGCACTGGACACTATTCAATACCTGTTTTCTAT...TTCTTGAATCAACAGTTGAAACTGAGAAGGCAATGGCAGCATTTCAGATTGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433782.6
ENST00000441800.5
CDS-3UTR TCA 90 bp GCTTTGAAGAGTCCCATGAAGTTAGTTACAGGAGGTAATAAAGTCAAAGAATCTCTAGTGTGTCCTTTTTaGAGCTTAATTCTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: ALKSPMKLVTGGNKVKESLVCPF*SLILQA
Trigger: AGCCTGCAGAATTAAGCTTCAAAAAGGACACACTAG...AGATTCTTTGACTTTATTACCTCCTGTAACTAACTTCATGGGACTCTTCAAAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433782.6
CDS-3UTR GCA 90 bp CAACAATCTGAAATGCTGCCATTGCCTTCTCAGTTTCAACTGTTGATTCAAGAATACAACAATCTGAAATaGTGCCATTGCCTTCTCAGT +
Preference number: 4 (lower is better)
Translates to: QQSEMLPLPSQFQLLIQEYNNLK*CHCLLS
Trigger: ACTGAGAAGGCAATGGCAGCATTTCAGATTGTTGTA...TTCTTGAATCAACAGTTGAAACTGAGAAGGCAATGGCAGCATTTCAGATTGTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433782.6
ENST00000441800.5
CDS-3UTR GCA 90 bp GAATTATGGATGGTCCTCCATTCTTCTCCAGACTCTTCTATTCCCGAGTACAAATTTAATTTTCTTCGGTaGTCCTTCCCTCTTTTAAAG +
Preference number: 4 (lower is better)
Translates to: ELWMVLHSSPDSSIPEYKFNFLR*SFPLLK
Trigger: CTTTAAAAGAGGGAAGGAGCACCGAAGAAAATTAAA...TTTGTACTCGGGAATAGAAGAGTCTGGAGAAGAATGGAGGACCATCCATAATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433782.6
CDS-3UTR CCA 90 bp GTCCATATCTCTAATGACTTTAGCCAGTACAACAATCTGAAATGCTGCCATTGCTCTTCCATAAATAAATaGAGGCAATTCTCGCTCTGT +
Preference number: 4 (lower is better)
Translates to: VHISNDFSQYNNLKCCHCSSINK*RQFSLC
Trigger: ACAGAGCGAGAATTGCCTCCATTTATTTATGGAAGA...GCAATGGCAGCATTTCAGATTGTTGTACTGGCTAAAGTCATTAGAGATATGGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433782.6
ENST00000441800.5
CDS-3UTR TCA 90 bp GCTTTGAAGAGTCCCATGAAGTTAGTTACAGGAGGTAATAAAGTCAAAGAATCTCCTACGTTATTCATTTaGCTCATAATTCCACATGGG +
Preference number: 4 (lower is better)
Translates to: ALKSPMKLVTGGNKVKESPTLFI*LIIPHG
Trigger: CCCATGTGGAATTATGAGTCAAATGAATAACGTAGG...AGATTCTTTGACTTTATTACCTCCTGTAACTAACTTCATGGGACTCTTCAAAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433782.6
CDS-3UTR GCA 90 bp GTCCATATCTCTAATGACTTTAGCCAGTACAACAATCTGAAATGCTGCCATTGCAATAGTAACACCTCTTaGAGACAAAGTAATATGGTC +
Preference number: 4 (lower is better)
Translates to: VHISNDFSQYNNLKCCHCNSNTS*RQSNMV
Trigger: GACCATATTACTTTGTCTGCAAGAGGTGTTACTATT...GCAATGGCAGCATTTCAGATTGTTGTACTGGCTAAAGTCATTAGAGATATGGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433782.6
ENST00000441800.5
CDS-3UTR GCA 90 bp GTCCATATCTCTAATGACTTTAGCCAGTACAACAATCTGAAATGCTGCCATTGCTGCTGGGTTAATACTTaGATCTCTGCTGATATTATT +
Preference number: 4 (lower is better)
Translates to: VHISNDFSQYNNLKCCHCCWVNT*ISADII
Trigger: AATAATATCAGCAGAGATGCAAGTATTAACCCAGCA...GCAATGGCAGCATTTCAGATTGTTGTACTGGCTAAAGTCATTAGAGATATGGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441800.5
CDS-3UTR CCA 90 bp CAACAATCTGAAATGCTGCCATTGCCTTCTCAGTTTCAACTGTTGATTCAAGAATGCACTGCACTTTTGTaGGTTGAGATATTACTCAAT +
Preference number: 4 (lower is better)
Translates to: QQSEMLPLPSQFQLLIQECTALL*VEILLN
Trigger: ATTGAGTAATATCTCAACCCACAAAAGTGCAGTGCA...TTCTTGAATCAACAGTTGAAACTGAGAAGGCAATGGCAGCATTTCAGATTGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433782.6
ENST00000441800.5
CDS-3UTR CCA 90 bp TCCTTCCCTCTTTTAAAGATAGGAATTATGGATGGTCCTCCATTCTTCTCCAGAAAATCTGATAAGATATaGGAGGCCTTTATGTTCTCT +
Preference number: 4 (lower is better)
Translates to: SFPLLKIGIMDGPPFFSRKSDKI*EAFMFS
Trigger: AGAGAACATAAAGGCCTCCCATATCTTATCAGATTT...TCTGGAGAAGAATGGAGGACCATCCATAATTCCTATCTTTAAAAGAGGGAAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433782.6
CDS-3UTR CCA 90 bp GTCCATATCTCTAATGACTTTAGCCAGTACAACAATCTGAAATGCTGCCATTGCACATGTTTCCCAAGTTaGTTCAAACACACTATTCTT +
Preference number: 4 (lower is better)
Translates to: VHISNDFSQYNNLKCCHCTCFPS*FKHTIL
Trigger: AAGAATAGTGTGTTTGAACCAACTTGGGAAACATGT...GCAATGGCAGCATTTCAGATTGTTGTACTGGCTAAAGTCATTAGAGATATGGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433782.6
CDS-3UTR CCA 90 bp CAACAATCTGAAATGCTGCCATTGCCTTCTCAGTTTCAACTGTTGATTCAAGAAAAATCTGATAAGATATaGGAGGCCTTTATGTTCTCT +
Preference number: 4 (lower is better)
Translates to: QQSEMLPLPSQFQLLIQEKSDKI*EAFMFS
Trigger: AGAGAACATAAAGGCCTCCCATATCTTATCAGATTT...TTCTTGAATCAACAGTTGAAACTGAGAAGGCAATGGCAGCATTTCAGATTGTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433782.6
ENST00000441800.5
CDS-3UTR CCA 90 bp CAACAATCTGAAATGCTGCCATTGCCTTCTCAGTTTCAACTGTTGATTCAAGAAGCAGACAAAGTAATATaGTCCATATCTCTAATGACT +
Preference number: 4 (lower is better)
Translates to: QQSEMLPLPSQFQLLIQEADKVI*SISLMT
Trigger: AGTCATTAGAGATATGGACCATATTACTTTGTCTGC...TTCTTGAATCAACAGTTGAAACTGAGAAGGCAATGGCAGCATTTCAGATTGTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433782.6
ENST00000441800.5
CDS-3UTR GCA 90 bp GCTTTGAAGAGTCCCATGAAGTTAGTTACAGGAGGTAATAAAGTCAAAGAATCTCGATTTTTCCAGAAATaGTTTCTGTATAAGAGCGTT +
Preference number: 4 (lower is better)
Translates to: ALKSPMKLVTGGNKVKESRFFQK*FLYKSV
Trigger: AACGCTCTTATACAGAAAGCATTTCTGGAAAAATCG...AGATTCTTTGACTTTATTACCTCCTGTAACTAACTTCATGGGACTCTTCAAAGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433782.6
CDS GCA 90 bp CGCGGGTCGAAGCGGTTGGTCCTCCGGGCCCTGGGGTGGCTGGGCTaGTCCTCGGGCGGAGCCTGCGGGCGACTAGGCCTGGTGCGTCCC +
Preference number: 5 (lower is better)
Translates to: RGSKRLVLRALGWLG*SSGGACGRLGLVRP
Trigger: GGGACGCACCAGGCCTAGTCGCCCGCAGGCTCCGCCCGAGGAGCAGCCCAGCCACCCCAGGGCCCGGAGGACCAACCGCTTCGACCCGCG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441800.5
CDS TCA 90 bp CTCAGGGCCTCCGCAAGGGCGAGCGGGAGGCGCACCGGAAGGAACTaGGAGGAACTTTCAGGGCTTTTCGCCCCACCGTGGCGGCCCGGC +
Preference number: 5 (lower is better)
Translates to: LRASARASGRRTGRN*EELSGLFAPPWRPG
Trigger: GCCGGGCCGCCACGGTGGGGCGAAAAGCCCTGAAAGTTCCTCTCAGTTCCTTCCGGTGCGCCTCCCGCTCGCCCTTGCGGAGGCCCTGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441800.5
ENST00000461516.5
CDS TCA 90 bp GCTGAGAACAGTCGTCGCCGCCTCAGATGGCTTCTCGCGGGGCCTTaGATCCGCCCTCAGGGCCTCCGCAAGGGCGAGCGGGAGGCGCAC +
Preference number: 5 (lower is better)
Translates to: AENSRRRLRWLLAGP*IRPQGLRKGEREAH
Trigger: GTGCGCCTCCCGCTCGCCCTTGCGGAGGCCCTGAGGGCGGATTCAAGGCCCCGCGAGAAGCCATCTGAGGCGGCGACGACTGTTCTCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441800.5
ENST00000461516.5
ENST00000684021.1
CDS TCA 90 bp CTTGTCCGGGAGAGGGACGCTGCGTCCGCGGCGTTCCCGTGGGGCTaGGAACAGTCGTCGCCGCCTCAGATGGCTTCTCGCGGGGCCTTG +
Preference number: 5 (lower is better)
Translates to: LVRERDAASAAFPWG*EQSSPPQMASRGAL
Trigger: CAAGGCCCCGCGAGAAGCCATCTGAGGCGGCGACGACTGTTCTCAGCCCCACGGGAACGCCGCGGACGCAGCGTCCCTCTCCCGGACAAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000441800.5
ENST00000461516.5
ENST00000684021.1
CDS GCA 90 bp AGTCAAACTCTAGAATGGCTGTTTTCTTGTCCGGGAGAGGGACGCTaGGTCCGCGGCGTTCCCGTGGGGCTGAGAACAGTCGTCGCCGCC +
Preference number: 5 (lower is better)
Translates to: SQTLEWLFSCPGEGR*VRGVPVGLRTVVAA
Trigger: GGCGGCGACGACTGTTCTCAGCCCCACGGGAACGCCGCGGACGCAGCGTCCCTCTCCCGGACAAGAAAACAGCCATTCTAGAGTTTGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441800.5
ENST00000461516.5
CDS-3UTR CAA 90 bp AGCTGCACGAACCTCTTCTATTCCCGAGTACAAATGATAGCAGAGCCGTTGGATGCTTCTCGCGGGGCCTaGAATCCGCCCTCAGGGCCT +
Preference number: 5 (lower is better)
Translates to: SCTNLFYSRVQMIAEPLDASRGA*NPPSGP
Trigger: AGGCCCTGAGGGCGGATTCAAGGCCCCGCGAGAAGC...ATCCAACGGCTCTGCTATCATTTGTACTCGGGAATAGAAGAGGTTCGTGCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441800.5
CDS-3UTR CAA 90 bp GTCCATATCTCTAATGACTTTAGCCAGTACAACAATCTGAAATGCTGCCATTGCCGCGGGTCGAAGCGGTaGGTCCTCCGGGCCCTGGGG +
Preference number: 5 (lower is better)
Translates to: VHISNDFSQYNNLKCCHCRGSKR*VLRALG
Trigger: CCCCAGGGCCCGGAGGACCAACCGCTTCGACCCGCG...GCAATGGCAGCATTTCAGATTGTTGTACTGGCTAAAGTCATTAGAGATATGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441800.5
CDS-3UTR CAA 90 bp TCTCCAGACTTAAGGAAGGAAGTCCCACCAGTGTTTGTTGCATTTGAAATTCCTAGACAGCGCCGGGCGTaGAGGCAGTCCCGAGTTGGA +
Preference number: 5 (lower is better)
Translates to: SPDLRKEVPPVFVAFEIPRQRRA*RQSRVG
Trigger: TCCAACTCGGGACTGCCTCAACGCCCGGCGCTGTCT...AGGAATTTCAAATGCAACAAACACTGGTGGGACTTCCTTCCTTAAGTCTGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441800.5
CDS CCA 90 bp TGCAGTGGAGAAGCCTACGTTATTCATTTGACTCATAATTCCACATaGGAGGTCTACTTGAGAGCGCACATCCTCTTTGGCAGACAACCA +
Preference number: 5 (lower is better)
Translates to: CSGEAYVIHLTHNST*EVYLRAHILFGRQP
Trigger: TGGTTGTCTGCCAAAGAGGATGTGCGCTCTCAAGTAGACCTCCCATGTGGAATTATGAGTCAAATGAATAACGTAGGCTTCTCCACTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313581.4
ENST00000433782.6
ENST00000520309.5
ENST00000684021.1
CDS-3UTR CAA 90 bp CGGTGCTCCTTCCCTCTTTTAAAGATAGGAATTATGGATGGTCCTCCATTCTTCACATGGGAGGTCTACTaGAGAGCGCACATCCTCTTT +
Preference number: 5 (lower is better)
Translates to: RCSFPLLKIGIMDGPPFFTWEVY*RAHILF
Trigger: AAAGAGGATGTGCGCTCTCAAGTAGACCTCCCATGT...GAAGAATGGAGGACCATCCATAATTCCTATCTTTAAAAGAGGGAAGGAGCACCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433782.6
CDS-3UTR CAA 90 bp GTCCATATCTCTAATGACTTTAGCCAGTACAACAATCTGAAATGCTGCCATTGCCGGGAGTCAGTAGGATaGCAGTGGAGAAGCCTACGT +
Preference number: 5 (lower is better)
Translates to: VHISNDFSQYNNLKCCHCRESVG*QWRSLR
Trigger: ACGTAGGCTTCTCCACTGCAATCCTACTGACTCCCG...GCAATGGCAGCATTTCAGATTGTTGTACTGGCTAAAGTCATTAGAGATATGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433782.6
CDS-3UTR CAA 90 bp GAATTATGGATGGTCCTCCATTCTTCTCCAGACTCTTCTATTCCCGAGTACAAATCTGCAGGCTCTGGGTaGGCTTTCTGGACATGTTTC +
Preference number: 5 (lower is better)
Translates to: ELWMVLHSSPDSSIPEYKSAGSG*AFWTCF
Trigger: GAAACATGTCCAGAAAGCCAACCCAGAGCCTGCAGA...TTTGTACTCGGGAATAGAAGAGTCTGGAGAAGAATGGAGGACCATCCATAATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433782.6
CDS-3UTR CAA 90 bp GTCCATATCTCTAATGACTTTAGCCAGTACAACAATCTGAAATGCTGCCATTGCAGAATGGCTGTTTTCTaGTCCGGGAGAGGGACGCTG +
Preference number: 5 (lower is better)
Translates to: VHISNDFSQYNNLKCCHCRMAVF*SGRGTL
Trigger: CAGCGTCCCTCTCCCGGACAAGAAAACAGCCATTCT...GCAATGGCAGCATTTCAGATTGTTGTACTGGCTAAAGTCATTAGAGATATGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441800.5
CDS CCA 90 bp GATGGAATGCCTCCCGCTTCTACCAAAGCATGCACTGCACTTTTGTaGGTTGAGATATTACTCAATAACCCAACAGTTTTGCACTGCAGT +
Preference number: 5 (lower is better)
Translates to: DGMPPASTKACTALL*VEILLNNPTVLHCS
Trigger: ACTGCAGTGCAAAACTGTTGGGTTATTGAGTAATATCTCAACCCACAAAAGTGCAGTGCATGCTTTGGTAGAAGCGGGAGGCATTCCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313581.4
ENST00000433782.6
ENST00000441800.5
ENST00000464687.1
ENST00000520309.5
ENST00000684021.1
CDS-3UTR CAA 90 bp AGCCGTTGGATTGTTCCTAATGTGGTAAATGCTTCTGGGATACCAGCTCTAGAAACAAAGCGCCTCTGGTaGACCTTGAAGTTAGCATTG +
Preference number: 5 (lower is better)
Translates to: SRWIVPNVVNASGIPALETKRLW*TLKLAL
Trigger: CAATGCTAACTTCAAGGTCAACCAGAGGCGCTTTGT...TTCTAGAGCTGGTATCCCAGAAGCATTTACCACATTAGGAACAATCCAACGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433782.6
ENST00000441800.5
CDS-3UTR CAA 90 bp TCCTTCCCTCTTTTAAAGATAGGAATTATGGATGGTCCTCCATTCTTCTCCAGACGCCTCTGGTTGACCTaGAAGTTAGCATTGCACAGT +
Preference number: 5 (lower is better)
Translates to: SFPLLKIGIMDGPPFFSRRLWLT*KLALHS
Trigger: ACTGTGCAATGCTAACTTCAAGGTCAACCAGAGGCG...TCTGGAGAAGAATGGAGGACCATCCATAATTCCTATCTTTAAAAGAGGGAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433782.6
CDS-3UTR CAA 90 bp AGCTGCACGAACCTCTTCTATTCCCGAGTACAAATGATAGCAGAGCCGTTGGATACAGTAGACAAACTGTaGTTTCTAATGAGCAAGCCT +
Preference number: 5 (lower is better)
Translates to: SCTNLFYSRVQMIAEPLDTVDKL*FLMSKP
Trigger: AGGCTTGCTCATTAGAAACAACAGTTTGTCTACTGT...ATCCAACGGCTCTGCTATCATTTGTACTCGGGAATAGAAGAGGTTCGTGCAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441800.5
CDS-3UTR CAA 90 bp AGCTGCACGAACCTCTTCTATTCCCGAGTACAAATGATAGCAGAGCCGTTGGATCTGCACTTTTGTGGGTaGAGATATTACTCAATAACC +
Preference number: 5 (lower is better)
Translates to: SCTNLFYSRVQMIAEPLDLHFCG*RYYSIT
Trigger: GGTTATTGAGTAATATCTCAACCCACAAAAGTGCAG...ATCCAACGGCTCTGCTATCATTTGTACTCGGGAATAGAAGAGGTTCGTGCAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441800.5
CDS-3UTR CAA 90 bp CAACAATCTGAAATGCTGCCATTGCCTTCTCAGTTTCAACTGTTGATTCAAGAACGCCTCTGGTTGACCTaGAAGTTAGCATTGCACAGT +
Preference number: 5 (lower is better)
Translates to: QQSEMLPLPSQFQLLIQERLWLT*KLALHS
Trigger: ACTGTGCAATGCTAACTTCAAGGTCAACCAGAGGCG...TTCTTGAATCAACAGTTGAAACTGAGAAGGCAATGGCAGCATTTCAGATTGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433782.6
ENST00000441800.5
CDS-3UTR CAA 90 bp ATTATGGATGGTCCTCCATTCTTCTCCAGACTCTTCTATTCCCGAGTACAAATGGCATGCACTGCACTTTaGTGGGTTGAGATATTACTC +
Preference number: 5 (lower is better)
Translates to: IMDGPPFFSRLFYSRVQMACTAL*WVEILL
Trigger: GAGTAATATCTCAACCCACAAAAGTGCAGTGCATGC...CATTTGTACTCGGGAATAGAAGAGTCTGGAGAAGAATGGAGGACCATCCATAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433782.6
CDS-3UTR CAA 90 bp GTCCATATCTCTAATGACTTTAGCCAGTACAACAATCTGAAATGCTGCCATTGCGTGATTCCACAGCCATaGCACCTTTCATTTGGACAC +
Preference number: 5 (lower is better)
Translates to: VHISNDFSQYNNLKCCHCVIPQP*HLSFGH
Trigger: GTGTCCAAATGAAAGGTGCAATGGCTGTGGAATCAC...GCAATGGCAGCATTTCAGATTGTTGTACTGGCTAAAGTCATTAGAGATATGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433782.6
ENST00000441800.5
CDS CCA 90 bp TCTGAAACATTGATTGTTGAGCTTGAGGTTTTACGGCTAAATGTGTaGAAAACTGCAGACAACCCTCTTTCAACAGCGGACTTCATACCA +
Preference number: 5 (lower is better)
Translates to: SETLIVELEVLRLNV*KTADNPLSTADFIP
Trigger: TGGTATGAAGTCCGCTGTTGAAAGAGGGTTGTCTGCAGTTTTCCACACATTTAGCCGTAAAACCTCAAGCTCAACAATCAATGTTTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313581.4
ENST00000433782.6
ENST00000441800.5
ENST00000520309.5
ENST00000684021.1
CDS-3UTR CAA 90 bp AGCCGTTGGATTGTTCCTAATGTGGTAAATGCTTCTGGGATACCAGCTCTAGAAAATTCTCGCTCTGTCTaGACCTTGTCATCTGAAAAA +
Preference number: 5 (lower is better)
Translates to: SRWIVPNVVNASGIPALENSRSV*TLSSEK
Trigger: TTTTTCAGATGACAAGGTCAAGACAGAGCGAGAATT...TTCTAGAGCTGGTATCCCAGAAGCATTTACCACATTAGGAACAATCCAACGGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433782.6
ENST00000441800.5
CDS-3UTR CAA 90 bp AGCCGTTGGATTGTTCCTAATGTGGTAAATGCTTCTGGGATACCAGCTCTAGAAGCTTCATCTGAAACATaGATTGTTGAGCTTGAGGTT +
Preference number: 5 (lower is better)
Translates to: SRWIVPNVVNASGIPALEASSET*IVELEV
Trigger: AACCTCAAGCTCAACAATCAATGTTTCAGATGAAGC...TTCTAGAGCTGGTATCCCAGAAGCATTTACCACATTAGGAACAATCCAACGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433782.6
ENST00000441800.5
CDS-3UTR CAA 90 bp CAACAATCTGAAATGCTGCCATTGCCTTCTCAGTTTCAACTGTTGATTCAAGAAACAAAGCGCCTCTGGTaGACCTTGAAGTTAGCATTG +
Preference number: 5 (lower is better)
Translates to: QQSEMLPLPSQFQLLIQETKRLW*TLKLAL
Trigger: CAATGCTAACTTCAAGGTCAACCAGAGGCGCTTTGT...TTCTTGAATCAACAGTTGAAACTGAGAAGGCAATGGCAGCATTTCAGATTGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433782.6
ENST00000441800.5
CDS-3UTR CAA 90 bp CAACAATCTGAAATGCTGCCATTGCCTTCTCAGTTTCAACTGTTGATTCAAGAAGTGATTCCACAGCCATaGCACCTTTCATTTGGACAC +
Preference number: 5 (lower is better)
Translates to: QQSEMLPLPSQFQLLIQEVIPQP*HLSFGH
Trigger: GTGTCCAAATGAAAGGTGCAATGGCTGTGGAATCAC...TTCTTGAATCAACAGTTGAAACTGAGAAGGCAATGGCAGCATTTCAGATTGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433782.6
ENST00000441800.5
CDS-3UTR CAA 90 bp AGCCGTTGGATTGTTCCTAATGTGGTAAATGCTTCTGGGATACCAGCTCTAGAAAAGTGCAACAGCTCCTaGTTCCTTAACATCTATTTG +
Preference number: 5 (lower is better)
Translates to: SRWIVPNVVNASGIPALEKCNSS*FLNIYL
Trigger: CAAATAGATGTTAAGGAACAAGGAGCTGTTGCACTT...TTCTAGAGCTGGTATCCCAGAAGCATTTACCACATTAGGAACAATCCAACGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433782.6
ENST00000441800.5
CDS TCA 90 bp ATTGTTCCTAATGTGGTAAATGCTTCTGGGATACCAGCTCTAGAATaGGCCAGGCTTGCTATTAAATTCCCAATACAAATGGATCCCACT +
Preference number: 5 (lower is better)
Translates to: IVPNVVNASGIPALE*ARLAIKFPIQMDPT
Trigger: AGTGGGATCCATTTGTATTGGGAATTTAATAGCAAGCCTGGCTCATTCTAGAGCTGGTATCCCAGAAGCATTTACCACATTAGGAACAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474303.5
CDS CCA 90 bp CCTTTCATTCTAAAATGTTTTATTAGCCTTCTGCAGGCTCTGGGTTaGCTTTCTGGACATGTTTCCCAAGTTGGTTCAAACACACTATTC +
Preference number: 5 (lower is better)
Translates to: PFILKCFISLLQALG*LSGHVSQVGSNTLF
Trigger: GAATAGTGTGTTTGAACCAACTTGGGAAACATGTCCAGAAAGCCAACCCAGAGCCTGCAGAAGGCTAATAAAACATTTTAGAATGAAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313581.4
ENST00000474303.5
CDS-3UTR CAA 90 bp CAACAATCTGAAATGCTGCCATTGCCTTCTCAGTTTCAACTGTTGATTCAAGAAGTTTCTTCAGGGCTGTaGGGATCATATGTTGGATCT +
Preference number: 5 (lower is better)
Translates to: QQSEMLPLPSQFQLLIQEVSSGL*GSYVGS
Trigger: AGATCCAACATATGATCCCAACAGCCCTGAAGAAAC...TTCTTGAATCAACAGTTGAAACTGAGAAGGCAATGGCAGCATTTCAGATTGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433782.6
ENST00000441800.5
CDS-3UTR CAA 90 bp GAATTATGGATGGTCCTCCATTCTTCTCCAGACTCTTCTATTCCCGAGTACAAAAATTCTCGCTCTGTCTaGACCTTGTCATCTGAAAAA +
Preference number: 5 (lower is better)
Translates to: ELWMVLHSSPDSSIPEYKNSRSV*TLSSEK
Trigger: TTTTTCAGATGACAAGGTCAAGACAGAGCGAGAATT...TTTGTACTCGGGAATAGAAGAGTCTGGAGAAGAATGGAGGACCATCCATAATTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433782.6
CDS-3UTR CAA 90 bp TCTCCAGACTTAAGGAAGGAAGTCCCACCAGTGTTTGTTGCATTTGAAATTCCTGCTTCATCTGAAACATaGATTGTTGAGCTTGAGGTT +
Preference number: 5 (lower is better)
Translates to: SPDLRKEVPPVFVAFEIPASSET*IVELEV
Trigger: AACCTCAAGCTCAACAATCAATGTTTCAGATGAAGC...AGGAATTTCAAATGCAACAAACACTGGTGGGACTTCCTTCCTTAAGTCTGGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441800.5
CDS-3UTR CAA 90 bp ATTATGGATGGTCCTCCATTCTTCTCCAGACTCTTCTATTCCCGAGTACAAATGACAGTAGACAAACTGTaGTTTCTAATGAGCAAGCCT +
Preference number: 5 (lower is better)
Translates to: IMDGPPFFSRLFYSRVQMTVDKL*FLMSKP
Trigger: AGGCTTGCTCATTAGAAACAACAGTTTGTCTACTGT...CATTTGTACTCGGGAATAGAAGAGTCTGGAGAAGAATGGAGGACCATCCATAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433782.6
CDS-3UTR CAA 90 bp ATTATGGATGGTCCTCCATTCTTCTCCAGACTCTTCTATTCCCGAGTACAAATGCTGCACTTTTGTGGGTaGAGATATTACTCAATAACC +
Preference number: 5 (lower is better)
Translates to: IMDGPPFFSRLFYSRVQMLHFCG*RYYSIT
Trigger: GGTTATTGAGTAATATCTCAACCCACAAAAGTGCAG...CATTTGTACTCGGGAATAGAAGAGTCTGGAGAAGAATGGAGGACCATCCATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433782.6
CDS-3UTR CAA 90 bp CAACAATCTGAAATGCTGCCATTGCCTTCTCAGTTTCAACTGTTGATTCAAGAAGCATGCACTGCACTTTaGTGGGTTGAGATATTACTC +
Preference number: 5 (lower is better)
Translates to: QQSEMLPLPSQFQLLIQEACTAL*WVEILL
Trigger: GAGTAATATCTCAACCCACAAAAGTGCAGTGCATGC...TTCTTGAATCAACAGTTGAAACTGAGAAGGCAATGGCAGCATTTCAGATTGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433782.6
ENST00000441800.5
CDS-3UTR CAA 90 bp GTCCATATCTCTAATGACTTTAGCCAGTACAACAATCTGAAATGCTGCCATTGCTCACAAACCAGTAGGTaGATTAGAGATGGAATGCCT +
Preference number: 5 (lower is better)
Translates to: VHISNDFSQYNNLKCCHCSQTSR*IRDGMP
Trigger: AGGCATTCCATCTCTAATCAACCTACTGGTTTGTGA...GCAATGGCAGCATTTCAGATTGTTGTACTGGCTAAAGTCATTAGAGATATGGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433782.6
ENST00000441800.5
CDS-3UTR CAA 90 bp ATTATGGATGGTCCTCCATTCTTCTCCAGACTCTTCTATTCCCGAGTACAAATGCATTGCACCTTTCATTaGGACACTAATTTGTTTCCC +
Preference number: 5 (lower is better)
Translates to: IMDGPPFFSRLFYSRVQMHCTFH*DTNLFP
Trigger: GGGAAACAAATTAGTGTCCAAATGAAAGGTGCAATG...CATTTGTACTCGGGAATAGAAGAGTCTGGAGAAGAATGGAGGACCATCCATAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433782.6
CDS-3UTR CAA 90 bp ATTATGGATGGTCCTCCATTCTTCTCCAGACTCTTCTATTCCCGAGTACAAATGAAGTGCAACAGCTCCTaGTTCCTTAACATCTATTTG +
Preference number: 5 (lower is better)
Translates to: IMDGPPFFSRLFYSRVQMKCNSS*FLNIYL
Trigger: CAAATAGATGTTAAGGAACAAGGAGCTGTTGCACTT...CATTTGTACTCGGGAATAGAAGAGTCTGGAGAAGAATGGAGGACCATCCATAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433782.6
CDS-3UTR CAA 90 bp CGGTGCTCCTTCCCTCTTTTAAAGATAGGAATTATGGATGGTCCTCCATTCTTCATTCCCTTCACATATTaGATTTTGATGCATCCTGCT +
Preference number: 5 (lower is better)
Translates to: RCSFPLLKIGIMDGPPFFIPFTY*ILMHPA
Trigger: AGCAGGATGCATCAAAATCAAATATGTGAAGGGAAT...GAAGAATGGAGGACCATCCATAATTCCTATCTTTAAAAGAGGGAAGGAGCACCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433782.6
CDS CCA 90 bp ACTTCTATATCCGCAGAGCTCTCTTTTAAAGATAGGAATTATGGATaGTCCTCCATTCTTCTCCAGACTCTTCTATTCCCGAGTACAAAT +
Preference number: 5 (lower is better)
Translates to: TSISAELSFKDRNYG*SSILLQTLLFPSTN
Trigger: ATTTGTACTCGGGAATAGAAGAGTCTGGAGAAGAATGGAGGACCATCCATAATTCCTATCTTTAAAAGAGAGCTCTGCGGATATAGAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476208.1
CDS-3UTR CAA 90 bp GTCCATATCTCTAATGACTTTAGCCAGTACAACAATCTGAAATGCTGCCATTGCCAACTCTCTTATCATTaGATGGACCTCTCTATAGTC +
Preference number: 5 (lower is better)
Translates to: VHISNDFSQYNNLKCCHCQLSYH*MDLSIV
Trigger: GACTATAGAGAGGTCCATCAAATGATAAGAGAGTTG...GCAATGGCAGCATTTCAGATTGTTGTACTGGCTAAAGTCATTAGAGATATGGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433782.6
CDS-3UTR CAA 90 bp GTCCATATCTCTAATGACTTTAGCCAGTACAACAATCTGAAATGCTGCCATTGCCTAGCTCGTTTTTCTTaGGGCATATATATTCCATGC +
Preference number: 5 (lower is better)
Translates to: VHISNDFSQYNNLKCCHCLARFS*GIYIPC
Trigger: GCATGGAATATATATGCCCAAAGAAAAACGAGCTAG...GCAATGGCAGCATTTCAGATTGTTGTACTGGCTAAAGTCATTAGAGATATGGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433782.6
CDS-3UTR CAA 90 bp TCCTTCCCTCTTTTAAAGATAGGAATTATGGATGGTCCTCCATTCTTCTCCAGATGTTGGGATCATATGTaGGATCTTCATTCACGTCTT +
Preference number: 5 (lower is better)
Translates to: SFPLLKIGIMDGPPFFSRCWDHM*DLHSRL
Trigger: AAGACGTGAATGAAGATCCAACATATGATCCCAACA...TCTGGAGAAGAATGGAGGACCATCCATAATTCCTATCTTTAAAAGAGGGAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433782.6
CDS-3UTR CAA 90 bp GCTTTGAAGAGTCCCATGAAGTTAGTTACAGGAGGTAATAAAGTCAAAGAATCTGTTTCTTCAGGGCTGTaGGGATCATATGTTGGATCT +
Preference number: 5 (lower is better)
Translates to: ALKSPMKLVTGGNKVKESVSSGL*GSYVGS
Trigger: AGATCCAACATATGATCCCAACAGCCCTGAAGAAAC...AGATTCTTTGACTTTATTACCTCCTGTAACTAACTTCATGGGACTCTTCAAAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433782.6
CDS-3UTR CAA 90 bp CAACAATCTGAAATGCTGCCATTGCCTTCTCAGTTTCAACTGTTGATTCAAGAATCACAAACCAGTAGGTaGATTAGAGATGGAATGCCT +
Preference number: 5 (lower is better)
Translates to: QQSEMLPLPSQFQLLIQESQTSR*IRDGMP
Trigger: AGGCATTCCATCTCTAATCAACCTACTGGTTTGTGA...TTCTTGAATCAACAGTTGAAACTGAGAAGGCAATGGCAGCATTTCAGATTGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433782.6
ENST00000441800.5
CDS TCA 90 bp TTTTTCCAGAAATGCTTTCTGTATAAGAGCGTTGTGACTTGCCAGTaGTTCCACAGCCATTGCACCTTTCATTTGGACACTAATTTGTTT +
Preference number: 5 (lower is better)
Translates to: FFQKCFLYKSVVTCQ*FHSHCTFHLDTNLF
Trigger: AAACAAATTAGTGTCCAAATGAAAGGTGCAATGGCTGTGGAATCACTGGCAAGTCACAACGCTCTTATACAGAAAGCATTTCTGGAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313581.4
ENST00000433782.6
ENST00000441800.5
ENST00000520309.5
ENST00000684021.1
CDS-3UTR CAA 90 bp CAACAATCTGAAATGCTGCCATTGCCTTCTCAGTTTCAACTGTTGATTCAAGAATGTTGGGATCATATGTaGGATCTTCATTCACGTCTT +
Preference number: 5 (lower is better)
Translates to: QQSEMLPLPSQFQLLIQECWDHM*DLHSRL
Trigger: AAGACGTGAATGAAGATCCAACATATGATCCCAACA...TTCTTGAATCAACAGTTGAAACTGAGAAGGCAATGGCAGCATTTCAGATTGTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433782.6
ENST00000441800.5
CDS-3UTR CAA 90 bp TCCTTCCCTCTTTTAAAGATAGGAATTATGGATGGTCCTCCATTCTTCTCCAGACCAAATGGAATACTCTaGCATTTCATAGCTCTTTTG +
Preference number: 5 (lower is better)
Translates to: SFPLLKIGIMDGPPFFSRPNGIL*HFIALL
Trigger: CAAAAGAGCTATGAAATGCAAGAGTATTCCATTTGG...TCTGGAGAAGAATGGAGGACCATCCATAATTCCTATCTTTAAAAGAGGGAAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433782.6
CDS-3UTR CAA 90 bp CAACAATCTGAAATGCTGCCATTGCCTTCTCAGTTTCAACTGTTGATTCAAGAACATTGCACCTTTCATTaGGACACTAATTTGTTTCCC +
Preference number: 5 (lower is better)
Translates to: QQSEMLPLPSQFQLLIQEHCTFH*DTNLFP
Trigger: GGGAAACAAATTAGTGTCCAAATGAAAGGTGCAATG...TTCTTGAATCAACAGTTGAAACTGAGAAGGCAATGGCAGCATTTCAGATTGTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433782.6
ENST00000441800.5
CDS-3UTR CAA 90 bp GTCCATATCTCTAATGACTTTAGCCAGTACAACAATCTGAAATGCTGCCATTGCTTCACATATTTGATTTaGATGCATCCTGCTGTCCTT +
Preference number: 5 (lower is better)
Translates to: VHISNDFSQYNNLKCCHCFTYLI*MHPAVL
Trigger: AAGGACAGCAGGATGCATCAAAATCAAATATGTGAA...GCAATGGCAGCATTTCAGATTGTTGTACTGGCTAAAGTCATTAGAGATATGGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433782.6
CDS-3UTR CAA 90 bp CAACAATCTGAAATGCTGCCATTGCCTTCTCAGTTTCAACTGTTGATTCAAGAAAAGTCCCACCAGTGTTaGTTGCATTTGAAATTCCTT +
Preference number: 5 (lower is better)
Translates to: QQSEMLPLPSQFQLLIQEKSHQC*LHLKFL
Trigger: AAGGAATTTCAAATGCAACAAACACTGGTGGGACTT...TTCTTGAATCAACAGTTGAAACTGAGAAGGCAATGGCAGCATTTCAGATTGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441800.5
CDS-3UTR CAA 90 bp CAACAATCTGAAATGCTGCCATTGCCTTCTCAGTTTCAACTGTTGATTCAAGAAGACATGTTTCCCAAGTaGGTTCAAACACACTATTCT +
Preference number: 5 (lower is better)
Translates to: QQSEMLPLPSQFQLLIQEDMFPK*VQTHYS
Trigger: AGAATAGTGTGTTTGAACCAACTTGGGAAACATGTC...TTCTTGAATCAACAGTTGAAACTGAGAAGGCAATGGCAGCATTTCAGATTGTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433782.6
CDS-3UTR CAA 90 bp GCTTTGAAGAGTCCCATGAAGTTAGTTACAGGAGGTAATAAAGTCAAAGAATCTTCTAGTGTGTCCTTTTaGAAGCTTAATTCTGCAGGC +
Preference number: 5 (lower is better)
Translates to: ALKSPMKLVTGGNKVKESSSVSF*KLNSAG
Trigger: GCCTGCAGAATTAAGCTTCAAAAAGGACACACTAGA...AGATTCTTTGACTTTATTACCTCCTGTAACTAACTTCATGGGACTCTTCAAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433782.6
CDS TCA 90 bp ATCTCCAGTATTGATCATTTGCTAAGCAAATTACTTCCAAGGACATaGCGGCCATCATCCTTCGTTTATAGCTTTCACACTGTAACATTT +
Preference number: 5 (lower is better)
Translates to: ISSIDHLLSKLLPRT*RPSSFVYSFHTVTF
Trigger: AAATGTTACAGTGTGAAAGCTATAAACGAAGGATGATGGCCGTCATGTCCTTGGAAGTAATTTGCTTAGCAAATGATCAATACTGGAGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313581.4
ENST00000433782.6
ENST00000441800.5
ENST00000520309.5
ENST00000684021.1
CDS-3UTR CAA 90 bp GCTTTGAAGAGTCCCATGAAGTTAGTTACAGGAGGTAATAAAGTCAAAGAATCTGCCTACGTTATTCATTaGACTCATAATTCCACATGG +
Preference number: 5 (lower is better)
Translates to: ALKSPMKLVTGGNKVKESAYVIH*THNSTW
Trigger: CCATGTGGAATTATGAGTCAAATGAATAACGTAGGC...AGATTCTTTGACTTTATTACCTCCTGTAACTAACTTCATGGGACTCTTCAAAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433782.6
CDS-3UTR CAA 90 bp CAACAATCTGAAATGCTGCCATTGCCTTCTCAGTTTCAACTGTTGATTCAAGAACCAAATGGAATACTCTaGCATTTCATAGCTCTTTTG +
Preference number: 5 (lower is better)
Translates to: QQSEMLPLPSQFQLLIQEPNGIL*HFIALL
Trigger: CAAAAGAGCTATGAAATGCAAGAGTATTCCATTTGG...TTCTTGAATCAACAGTTGAAACTGAGAAGGCAATGGCAGCATTTCAGATTGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433782.6
ENST00000441800.5
CDS TCA 90 bp GCATATATATTCCATGCCATAGTGCTTTCAGCATGTAGTCAATATTaGTCAGAATTTGCCCAATTCTGGTATCATAATAAGCTGGAGGTA +
Preference number: 5 (lower is better)
Translates to: AYIFHAIVLSACSQY*SEFAQFWYHNKLEV
Trigger: TACCTCCAGCTTATTATGATACCAGAATTGGGCAAATTCTGATCAATATTGACTACATGCTGAAAGCACTATGGCATGGAATATATATGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313581.4
ENST00000433782.6
ENST00000520309.5
ENST00000684021.1
CDS TCA 72 bp AGTCGTCGCCGCCTCAGATGGCTTCTCGCGGGGCCTTaGATCCGCCCTCAGGGCCTCCGCAAGGGCGAGCGG +
Preference number: 6 (lower is better)
Translates to: SRRRLRWLLAGP*IRPQGLRKGER
Trigger: CCGCTCGCCCTTGCGGAGGCCCTGAGGGCGGATTCAAGGCCCCGCGAGAAGCCATCTGAGGCGGCGACGACT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441800.5
ENST00000461516.5
ENST00000684021.1
CDS CAA 72 bp CAGTCGTCGCCGCCTCAGATGGCTTCTCGCGGGGCCTaGAATCCGCCCTCAGGGCCTCCGCAAGGGCGAGCG +
Preference number: 6 (lower is better)
Translates to: QSSPPQMASRGA*NPPSGPPQGRA
Trigger: CGCTCGCCCTTGCGGAGGCCCTGAGGGCGGATTCAAGGCCCCGCGAGAAGCCATCTGAGGCGGCGACGACTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441800.5
ENST00000461516.5
ENST00000684021.1
CDS TCA 72 bp GAGAGGGACGCTGCGTCCGCGGCGTTCCCGTGGGGCTaGGAACAGTCGTCGCCGCCTCAGATGGCTTCTCGC +
Preference number: 6 (lower is better)
Translates to: ERDAASAAFPWG*EQSSPPQMASR
Trigger: GCGAGAAGCCATCTGAGGCGGCGACGACTGTTCTCAGCCCCACGGGAACGCCGCGGACGCAGCGTCCCTCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441800.5
ENST00000461516.5
ENST00000684021.1
CDS GCA 72 bp TCATCCCAAGCCCGCTTAGCGCTTAGTCCAGCGGCATaGCGTGGGCACTGTGCCGCCCTCACTATCTGCCTC +
Preference number: 6 (lower is better)
Translates to: SSQARLALSPAA*RGHCAALTICL
Trigger: GAGGCAGATAGTGAGGGCGGCACAGTGCCCACGGCATGCCGCTGGACTAAGCGCTAAGCGGGCTTGGGATGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441800.5
CDS GCA 72 bp CTAGAATGGCTGTTTTCTTGTCCGGGAGAGGGACGCTaGGTCCGCGGCGTTCCCGTGGGGCTGAGAACAGTC +
Preference number: 6 (lower is better)
Translates to: LEWLFSCPGEGR*VRGVPVGLRTV
Trigger: GACTGTTCTCAGCCCCACGGGAACGCCGCGGACGCAGCGTCCCTCTCCCGGACAAGAAAACAGCCATTCTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000441800.5
ENST00000461516.5
ENST00000684021.1
CDS CAA 90 bp ACAGCACAGCGAGAGTGTACTTCAGGCTCATCACAAACCAGTAGGTaGATTAGAGATGGAATGCCTCCCGCTTCTACCAAAGCATGCACT +
Preference number: 6 (lower is better)
Translates to: TAQRECTSGSSQTSR*IRDGMPPASTKACT
Trigger: AGTGCATGCTTTGGTAGAAGCGGGAGGCATTCCATCTCTAATCAACCTACTGGTTTGTGATGAGCCTGAAGTACACTCTCGCTGTGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313581.4
ENST00000433782.6
ENST00000441800.5
ENST00000464687.1
ENST00000520309.5
ENST00000684021.1
CDS CAA 72 bp CGAGAGTGTACTTCAGGCTCATCACAAACCAGTAGGTaGATTAGAGATGGAATGCCTCCCGCTTCTACCAAA +
Preference number: 6 (lower is better)
Translates to: RECTSGSSQTSR*IRDGMPPASTK
Trigger: TTTGGTAGAAGCGGGAGGCATTCCATCTCTAATCAACCTACTGGTTTGTGATGAGCCTGAAGTACACTCTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313581.4
ENST00000433782.6
ENST00000441800.5
ENST00000464687.1
ENST00000520309.5
ENST00000684021.1
CDS CAA 90 bp AGAGATGGAATGCCTCCCGCTTCTACCAAAGCATGCACTGCACTTTaGTGGGTTGAGATATTACTCAATAACCCAACAGTTTTGCACTGC +
Preference number: 6 (lower is better)
Translates to: RDGMPPASTKACTAL*WVEILLNNPTVLHC
Trigger: GCAGTGCAAAACTGTTGGGTTATTGAGTAATATCTCAACCCACAAAAGTGCAGTGCATGCTTTGGTAGAAGCGGGAGGCATTCCATCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313581.4
ENST00000433782.6
ENST00000441800.5
ENST00000464687.1
ENST00000520309.5
ENST00000684021.1
CDS CAA 72 bp ATTCATTTGACTCATAATTCCACATGGGAGGTCTACTaGAGAGCGCACATCCTCTTTGGCAGACAACCAGCT +
Preference number: 6 (lower is better)
Translates to: IHLTHNSTWEVY*RAHILFGRQPA
Trigger: AGCTGGTTGTCTGCCAAAGAGGATGTGCGCTCTCAAGTAGACCTCCCATGTGGAATTATGAGTCAAATGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313581.4
ENST00000433782.6
ENST00000520309.5
ENST00000684021.1
CDS TCA 72 bp GTTTTTCTCCAGTTAGCACCGATAGAAAACAGGTATTaGATAGTGTCCAGTGCTCCTGAAGTGGCAGCAAGT +
Preference number: 6 (lower is better)
Translates to: VFLQLAPIENRY*IVSSAPEVAAS
Trigger: ACTTGCTGCCACTTCAGGAGCACTGGACACTATTCAATACCTGTTTTCTATCGGTGCTAACTGGAGAAAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313581.4
ENST00000433782.6
ENST00000441800.5
ENST00000464687.1
ENST00000520309.5
ENST00000684021.1
CDS CCA 72 bp TTGATTGTTGAGCTTGAGGTTTTACGGCTAAATGTGTaGAAAACTGCAGACAACCCTCTTTCAACAGCGGAC +
Preference number: 6 (lower is better)
Translates to: LIVELEVLRLNV*KTADNPLSTAD
Trigger: GTCCGCTGTTGAAAGAGGGTTGTCTGCAGTTTTCCACACATTTAGCCGTAAAACCTCAAGCTCAACAATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313581.4
ENST00000433782.6
ENST00000441800.5
ENST00000520309.5
ENST00000684021.1
CDS CCA 72 bp CCTCCCGCTTCTACCAAAGCATGCACTGCACTTTTGTaGGTTGAGATATTACTCAATAACCCAACAGTTTTG +
Preference number: 6 (lower is better)
Translates to: PPASTKACTALL*VEILLNNPTVL
Trigger: CAAAACTGTTGGGTTATTGAGTAATATCTCAACCCACAAAAGTGCAGTGCATGCTTTGGTAGAAGCGGGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313581.4
ENST00000433782.6
ENST00000441800.5
ENST00000464687.1
ENST00000520309.5
ENST00000684021.1
CDS CCA 72 bp TCCGCAGAGCTCTCTTTTAAAGATAGGAATTATGGATaGTCCTCCATTCTTCTCCAGACTCTTCTATTCCCG +
Preference number: 6 (lower is better)
Translates to: SAELSFKDRNYG*SSILLQTLLFP
Trigger: CGGGAATAGAAGAGTCTGGAGAAGAATGGAGGACCATCCATAATTCCTATCTTTAAAAGAGAGCTCTGCGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476208.1
CDS CAA 72 bp GCGTGTAATCAGCTTTGGAACACAGTAGACAAACTGTaGTTTCTAATGAGCAAGCCTGTGCAGCAAGGTGTA +
Preference number: 6 (lower is better)
Translates to: ACNQLWNTVDKL*FLMSKPVQQGV
Trigger: TACACCTTGCTGCACAGGCTTGCTCATTAGAAACAACAGTTTGTCTACTGTGTTCCAAAGCTGATTACACGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313581.4
ENST00000433782.6
ENST00000441800.5
ENST00000520309.5
ENST00000684021.1
CDS CAA 90 bp TTTCAGAAAGCGTGTAATCAGCTTTGGAACACAGTAGACAAACTGTaGTTTCTAATGAGCAAGCCTGTGCAGCAAGGTGTAGAGGTGTTG +
Preference number: 6 (lower is better)
Translates to: FQKACNQLWNTVDKL*FLMSKPVQQGVEVL
Trigger: CAACACCTCTACACCTTGCTGCACAGGCTTGCTCATTAGAAACAACAGTTTGTCTACTGTGTTCCAAAGCTGATTACACGCTTTCTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313581.4
ENST00000433782.6
ENST00000441800.5
ENST00000520309.5
ENST00000684021.1
CDS GCA 72 bp ATTAGAGATGGAATGCCTCCCGCTTCTACCAAAGCATaGACTGCACTTTTGTGGGTTGAGATATTACTCAAT +
Preference number: 6 (lower is better)
Translates to: IRDGMPPASTKA*TALLWVEILLN
Trigger: ATTGAGTAATATCTCAACCCACAAAAGTGCAGTGCATGCTTTGGTAGAAGCGGGAGGCATTCCATCTCTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313581.4
ENST00000433782.6
ENST00000441800.5
ENST00000464687.1
ENST00000520309.5
ENST00000684021.1
CDS CAA 72 bp CCGCTTCTACCAAAGCATGCACTGCACTTTTGTGGGTaGAGATATTACTCAATAACCCAACAGTTTTGCACT +
Preference number: 6 (lower is better)
Translates to: PLLPKHALHFCG*RYYSITQQFCT
Trigger: AGTGCAAAACTGTTGGGTTATTGAGTAATATCTCAACCCACAAAAGTGCAGTGCATGCTTTGGTAGAAGCGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313581.4
ENST00000433782.6
ENST00000441800.5
ENST00000464687.1
ENST00000520309.5
ENST00000684021.1
CDS TCA 72 bp CATCCTTGTTTTCACATTGAGCAATATCATATAGAATaGCAGCACAGCGAGAGTGTACTTCAGGCTCATCAC +
Preference number: 6 (lower is better)
Translates to: HPCFHIEQYHIE*QHSESVLQAHH
Trigger: GTGATGAGCCTGAAGTACACTCTCGCTGTGCTGTCATTCTATATGATATTGCTCAATGTGAAAACAAGGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313581.4
ENST00000433782.6
ENST00000441800.5
ENST00000464687.1
ENST00000520309.5
ENST00000684021.1
CDS CAA 72 bp TTCCACAGCCATTGCACCTTTCATTTGGACACTAATTaGTTTCCCTTTAAAAAGAGCCACCAGAGGAGGAAT +
Preference number: 6 (lower is better)
Translates to: FHSHCTFHLDTN*FPFKKSHQRRN
Trigger: ATTCCTCCTCTGGTGGCTCTTTTTAAAGGGAAACAAATTAGTGTCCAAATGAAAGGTGCAATGGCTGTGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313581.4
ENST00000433782.6
ENST00000441800.5
ENST00000520309.5
ENST00000684021.1
CDS TCA 72 bp CTGGAAAGGCATTTTCATCTACAACCAATTGTTGACTaGCAGGATTGCTTGTATGGGCTACACCAATACAAA +
Preference number: 6 (lower is better)
Translates to: LERHFHLQPIVD*QDCLYGLHQYK
Trigger: TTTGTATTGGTGTAGCCCATACAAGCAATCCTGTCAGTCAACAATTGGTTGTAGATGAAAATGCCTTTCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313581.4
ENST00000520309.5
ENST00000684021.1
CDS TCA 72 bp AATGTGGTAAATGCTTCTGGGATACCAGCTCTAGAATaGGCCAGGCTTGCTATTAAATTCCCAATACAAATG +
Preference number: 6 (lower is better)
Translates to: NVVNASGIPALE*ARLAIKFPIQM
Trigger: CATTTGTATTGGGAATTTAATAGCAAGCCTGGCTCATTCTAGAGCTGGTATCCCAGAAGCATTTACCACATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474303.5
CDS CAA 72 bp AAGTACTGGAAAGGCATTTTCATCTACAACCAATTGTaGACTGACAGGATTGCTTGTATGGGCTACACCAAT +
Preference number: 6 (lower is better)
Translates to: KYWKGIFIYNQL*TDRIACMGYTN
Trigger: ATTGGTGTAGCCCATACAAGCAATCCTGTCAGTCAACAATTGGTTGTAGATGAAAATGCCTTTCCAGTACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313581.4
ENST00000520309.5
ENST00000684021.1
CDS CAA 90 bp ATATCCATATATGATAGTTATTTTGGTTTTCTCAATTCCTTCAGGTaGCATCTGGTGGTGTCGCAAGTAACTTCTATATCCGCAGAGCTC +
Preference number: 6 (lower is better)
Translates to: ISIYDSYFGFLNSFR*HLVVSQVTSISAEL
Trigger: GAGCTCTGCGGATATAGAAGTTACTTGCGACACCACCAGATGCAACCTGAAGGAATTGAGAAAACCAAAATAACTATCATATATGGATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476208.1
CDS TCA 72 bp ATTGATCATTTGCTAAGCAAATTACTTCCAAGGACATaGCGGCCATCATCCTTCGTTTATAGCTTTCACACT +
Preference number: 6 (lower is better)
Translates to: IDHLLSKLLPRT*RPSSFVYSFHT
Trigger: AGTGTGAAAGCTATAAACGAAGGATGATGGCCGTCATGTCCTTGGAAGTAATTTGCTTAGCAAATGATCAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313581.4
ENST00000433782.6
ENST00000441800.5
ENST00000520309.5
ENST00000684021.1
CDS CCA 72 bp TACAGCTGTTTCTTCAGGGCTGTTGGGATCATATGTTaGATCTTCATTCACGTCTTCATCATAGATTTCATT +
Preference number: 6 (lower is better)
Translates to: YSCFFRAVGIIC*IFIHVFIIDFI
Trigger: AATGAAATCTATGATGAAGACGTGAATGAAGATCCAACATATGATCCCAACAGCCCTGAAGAAACAGCTGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313581.4
ENST00000433782.6
ENST00000441800.5
ENST00000461516.5
ENST00000467927.1
ENST00000520309.5
ENST00000684021.1
CDS CAA 72 bp ATACAGCTGTTTCTTCAGGGCTGTTGGGATCATATGTaGGATCTTCATTCACGTCTTCATCATAGATTTCAT +
Preference number: 6 (lower is better)
Translates to: IQLFLQGCWDHM*DLHSRLHHRFH
Trigger: ATGAAATCTATGATGAAGACGTGAATGAAGATCCAACATATGATCCCAACAGCCCTGAAGAAACAGCTGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313581.4
ENST00000433782.6
ENST00000441800.5
ENST00000461516.5
ENST00000467927.1
ENST00000520309.5
ENST00000684021.1
CDS TCA 72 bp CATTTAAACCTGAAAATCTTCCAAGGCATTCTCAATTaGAGGGGTGCTGATATCAAATTCAATTCCTCCATG +
Preference number: 6 (lower is better)
Translates to: HLNLKIFQGILN*RGADIKFNSSM
Trigger: CATGGAGGAATTGAATTTGATATCAGCACCCCTTCAATTGAGAATGCCTTGGAAGATTTTCAGGTTTAAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467927.1
CDS CAA 72 bp TATGATAGTTATTTTGGTTTTCTCAATTCCTTCAGGTaGCATCTGGTGGTGTCGCAAGTAACTTCTATATCC +
Preference number: 6 (lower is better)
Translates to: YDSYFGFLNSFR*HLVVSQVTSIS
Trigger: GGATATAGAAGTTACTTGCGACACCACCAGATGCAACCTGAAGGAATTGAGAAAACCAAAATAACTATCATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476208.1