RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ANGPTL4 (Homo sapiens)

Ensembl gene IDs: ENSG00000167772

Ensembl transcript IDs: ENST00000301455.7, ENST00000393962.6, ENST00000593998.5, ENST00000594348.1, ENST00000594875.1, ENST00000595079.5, ENST00000597137.5, ENST00000598255.5, ENST00000599192.5, ENST00000601770.1, ENST00000601886.1

Found 533 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGTCGTGATCCTGGTCCCAAGTGGAGAAGGGTACGGAGAGGCCGCTaGGTGGGACGGTGGTGGCGCCCAGCTGGCCGGCCACGGGTGCAG +
Preference number: 1 (lower is better)
Translates to: GRDPGPKWRRVRRGR*VGRWWRPAGRPRVQ
Trigger: CTGCACCCGTGGCCGGCCAGCTGGGCGCCACCACCGTCCCACCCAGCGGCCTCTCCGTACCCTTCTCCACTTGGGACCAGGATCACGACC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595079.5
3UTR CCA 90 bp GTGATCCTGGTCCCAAGTGGAGAAGGGTACGGAGAGGCCGCTGGGTaGGACGGTGGTGGCGCCCAGCTGGCCGGCCACGGGTGCAGTGAG +
Preference number: 1 (lower is better)
Translates to: VILVPSGEGYGEAAG*DGGGAQLAGHGCSE
Trigger: CTCACTGCACCCGTGGCCGGCCAGCTGGGCGCCACCACCGTCCCACCCAGCGGCCTCTCCGTACCCTTCTCCACTTGGGACCAGGATCAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595079.5
3UTR TCA 90 bp CCCAGTCCCGCAGCTGCACGGCCAGGCGGCTGTTGCGGTCCCCCGTaGTGCTATGCACCTTCTCCAGACCCAGCCAGAACTCGCCGTGGG +
Preference number: 1 (lower is better)
Translates to: PSPAAARPGGCCGPP*CYAPSPDPARTRRG
Trigger: CCCACGGCGAGTTCTGGCTGGGTCTGGAGAAGGTGCATAGCATCACGGGGGACCGCAACAGCCGCCTGGCCGTGCAGCTGCGGGACTGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000595079.5
3UTR GCA 90 bp TGTCCTCGCCACCCAGGTGCACGGAGAACTGCAGCAACTCGGCGTTaGCATCCCAGTCCCGCAGCTGCACGGCCAGGCGGCTGTTGCGGT +
Preference number: 1 (lower is better)
Translates to: CPRHPGARRTAATRR*HPSPAAARPGGCCG
Trigger: ACCGCAACAGCCGCCTGGCCGTGCAGCTGCGGGACTGGGATGGCAACGCCGAGTTGCTGCAGTTCTCCGTGCACCTGGGTGGCGAGGACA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595079.5
3UTR GCA 90 bp GTGGGCCTGGGACCAGGCCCAGCCAGGACGCTAGGAGGCTGCCTCTaGTGCCATGGGCTGGATCAACATGGTGGTGGCCTGCAGCGGGTA +
Preference number: 1 (lower is better)
Translates to: VGLGPGPARTLGGCL*CHGLDQHGGGLQRV
Trigger: TACCCGCTGCAGGCCACCACCATGTTGATCCAGCCCATGGCAGCAGAGGCAGCCTCCTAGCGTCCTGGCTGGGCCTGGTCCCAGGCCCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595079.5
3UTR CCA 90 bp CCTGGGCAGCCGGTGCAGGCGGCTGACATTGTGAGCCGGGTCAACTaGCTGGGCCATCTCGGGCAGCCTCTTTCTTCGGGCAGGCTTGGC +
Preference number: 1 (lower is better)
Translates to: PGQPVQAADIVSRVN*LGHLGQPLSSGRLG
Trigger: GCCAAGCCTGCCCGAAGAAAGAGGCTGCCCGAGATGGCCCAGCCAGTTGACCCGGCTCACAATGTCAGCCGCCTGCACCGGCTGCCCAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595079.5
3UTR GCA 90 bp ACGGAGAACTGCAGCAACTCGGCGTTGCCATCCCAGTCCCGCAGCTaGACGGCCAGGCGGCTGTTGCGGTCCCCCGTGATGCTATGCACC +
Preference number: 1 (lower is better)
Translates to: TENCSNSALPSQSRS*TARRLLRSPVMLCT
Trigger: GGTGCATAGCATCACGGGGGACCGCAACAGCCGCCTGGCCGTGCAGCTGCGGGACTGGGATGGCAACGCCGAGTTGCTGCAGTTCTCCGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000595079.5
3UTR CCA 90 bp CAGGACGCTAGGAGGCTGCCTCTGCTGCCATGGGCTGGATCAACATaGTGGTGGCCTGCAGCGGGTAGTAGCGGCCCCGCCAGGTCTTCC +
Preference number: 1 (lower is better)
Translates to: QDARRLPLLPWAGST*WWPAAGSSGPARSS
Trigger: GGAAGACCTGGCGGGGCCGCTACTACCCGCTGCAGGCCACCACCATGTTGATCCAGCCCATGGCAGCAGAGGCAGCCTCCTAGCGTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595079.5
3UTR CCA 90 bp GACGCTAGGAGGCTGCCTCTGCTGCCATGGGCTGGATCAACATGGTaGTGGCCTGCAGCGGGTAGTAGCGGCCCCGCCAGGTCTTCCAGA +
Preference number: 1 (lower is better)
Translates to: DARRLPLLPWAGSTW*WPAAGSSGPARSSR
Trigger: TCTGGAAGACCTGGCGGGGCCGCTACTACCCGCTGCAGGCCACCACCATGTTGATCCAGCCCATGGCAGCAGAGGCAGCCTCCTAGCGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595079.5
3UTR CCA 90 bp GCTAGGAGGCTGCCTCTGCTGCCATGGGCTGGATCAACATGGTGGTaGCCTGCAGCGGGTAGTAGCGGCCCCGCCAGGTCTTCCAGAAGA +
Preference number: 1 (lower is better)
Translates to: ARRLPLLPWAGSTWW*PAAGSSGPARSSRR
Trigger: TCTTCTGGAAGACCTGGCGGGGCCGCTACTACCCGCTGCAGGCCACCACCATGTTGATCCAGCCCATGGCAGCAGAGGCAGCCTCCTAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595079.5
3UTR TCA 90 bp AGGGCGCTCTCGACCCACACAAGCCCTGGTCCCCGTCAGTCAATGTaGCTGAGTCCGCCATTGAGGCCAGTCTGGCTGGCCCCAAGTGGT +
Preference number: 1 (lower is better)
Translates to: RALSTHTSPGPRQSM*LSPPLRPVWLAPSG
Trigger: ACCACTTGGGGCCAGCCAGACTGGCCTCAATGGCGGACTCAGTCACATTGACTGACGGGGACCAGGGCTTGTGTGGGTCGAGAGCGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
3UTR TCA 90 bp CCTCCAGAGAGGCTCTTGGCGCAGTTCTTGTCCCTGCGGAGGTCGTaGTCCTGGTCCCAAGTGGAGAAGGGTACGGAGAGGCCGCTGGGT +
Preference number: 1 (lower is better)
Translates to: PPERLLAQFLSLRRS*SWSQVEKGTERPLG
Trigger: ACCCAGCGGCCTCTCCGTACCCTTCTCCACTTGGGACCAGGATCACGACCTCCGCAGGGACAAGAACTGCGCCAAGAGCCTCTCTGGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595079.5
3UTR GCA 90 bp TCTTCTCTGTCCACAAGTTTCCAGATGGCCCCTCCTTGGAGCCCCTaGCCAGGCAGGGAACGGCCACATCCTCGGGCAGAGCCAAGAGTC +
Preference number: 1 (lower is better)
Translates to: SSLSTSFQMAPPWSP*PGRERPHPRAEPRV
Trigger: GACTCTTGGCTCTGCCCGAGGATGTGGCCGTTCCCTGCCTGGGCAGGGGCTCCAAGGAGGGGCCATCTGGAAACTTGTGGACAGAGAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000595079.5
3UTR CCA 90 bp TCGTGGTCTTCTTCTCTGTCCACAAGTTTCCAGATGGCCCCTCCTTaGAGCCCCTGCCCAGGCAGGGAACGGCCACATCCTCGGGCAGAG +
Preference number: 1 (lower is better)
Translates to: SWSSSLSTSFQMAPP*SPCPGRERPHPRAE
Trigger: CTCTGCCCGAGGATGTGGCCGTTCCCTGCCTGGGCAGGGGCTCCAAGGAGGGGCCATCTGGAAACTTGTGGACAGAGAAGAAGACCACGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000595079.5
3UTR CCA 90 bp GGCTTCTCCAGTCGTGGTCTTCTTCTCTGTCCACAAGTTTCCAGATaGCCCCTCCTTGGAGCCCCTGCCCAGGCAGGGAACGGCCACATC +
Preference number: 1 (lower is better)
Translates to: GFSSRGLLLCPQVSR*PLLGAPAQAGNGHI
Trigger: GATGTGGCCGTTCCCTGCCTGGGCAGGGGCTCCAAGGAGGGGCCATCTGGAAACTTGTGGACAGAGAAGAAGACCACGACTGGAGAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000595079.5
3UTR CCA 90 bp CAACAGCACCAGCACCATGAGGGCGCTCTCGACCCACACAAGCCCTaGTCCCCGTCAGTCAATGTGACTGAGTCCGCCATTGAGGCCAGT +
Preference number: 1 (lower is better)
Translates to: QQHQHHEGALDPHKP*SPSVNVTESAIEAS
Trigger: ACTGGCCTCAATGGCGGACTCAGTCACATTGACTGACGGGGACCAGGGCTTGTGTGGGTCGAGAGCGCCCTCATGGTGCTGGTGCTGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
3UTR GCA 90 bp CAAACCACCAGCCTCCAGAGAGGCTCTTGGCGCAGTTCTTGTCCCTaGGGAGGTCGTGATCCTGGTCCCAAGTGGAGAAGGGTACGGAGA +
Preference number: 1 (lower is better)
Translates to: QTTSLQRGSWRSSCP*GGRDPGPKWRRVRR
Trigger: TCTCCGTACCCTTCTCCACTTGGGACCAGGATCACGACCTCCGCAGGGACAAGAACTGCGCCAAGAGCCTCTCTGGAGGCTGGTGGTTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595079.5
3UTR TCA 90 bp GCAAGGAGTGAAGCTCCATGCCCCTTGGTCCACGCCTCTAGAGTCTaGGCATATCCTGCAGCCTCGATCTCAGGAGGCAACGCATGCAGC +
Preference number: 1 (lower is better)
Translates to: ARSEAPCPLVHASRV*AYPAASISGGNACS
Trigger: GCTGCATGCGTTGCCTCCTGAGATCGAGGCTGCAGGATATGCTCAGACTCTAGAGGCGTGGACCAAGGGGCATGGAGCTTCACTCCTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
3UTR CCA 90 bp AGTCCCCAACTCCCTGGCCAGCAAGGAGTGAAGCTCCATGCCCCTTaGTCCACGCCTCTAGAGTCTGAGCATATCCTGCAGCCTCGATCT +
Preference number: 1 (lower is better)
Translates to: SPQLPGQQGVKLHAP*STPLESEHILQPRS
Trigger: AGATCGAGGCTGCAGGATATGCTCAGACTCTAGAGGCGTGGACCAAGGGGCATGGAGCTTCACTCCTTGCTGGCCAGGGAGTTGGGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
3UTR GCA 90 bp CCCCGCCAGGTCTTCCAGAAGATTCCCTTCTTAAGCTTCTGCCGCTaGTGTGGGATGGAGCGGAAGTACTGGCCGTTGAGGTTGGAATGG +
Preference number: 1 (lower is better)
Translates to: PRQVFQKIPFLSFCR*CGMERKYWPLRLEW
Trigger: CCATTCCAACCTCAACGGCCAGTACTTCCGCTCCATCCCACAGCAGCGGCAGAAGCTTAAGAAGGGAATCTTCTGGAAGACCTGGCGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595079.5
3UTR GCA 90 bp TTATTCCAAGAACTCTGTGAGCTCCGCCCAGATACCATTGGCGCCTaGTTGTGTCCCCAGGGGACCTACACACAACAGCACCAGCACCAT +
Preference number: 1 (lower is better)
Translates to: LFQELCELRPDTIGA*LCPQGTYTQQHQHH
Trigger: ATGGTGCTGGTGCTGTTGTGTGTAGGTCCCCTGGGGACACAAGCAGGCGCCAATGGTATCTGGGCGGAGCTCACAGAGTTCTTGGAATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000593998.5
ENST00000594875.1
3UTR CCA 90 bp CCAGGTCTTCCAGAAGATTCCCTTCTTAAGCTTCTGCCGCTGCTGTaGGATGGAGCGGAAGTACTGGCCGTTGAGGTTGGAATGGCTGCA +
Preference number: 1 (lower is better)
Translates to: PGLPEDSLLKLLPLL*DGAEVLAVEVGMAA
Trigger: TGCAGCCATTCCAACCTCAACGGCCAGTACTTCCGCTCCATCCCACAGCAGCGGCAGAAGCTTAAGAAGGGAATCTTCTGGAAGACCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595079.5
3UTR CAA 90 bp GTGTCCTCGCCACCCAGGTGCACGGAGAACTGCAGCAACTCGGCGTaGCCATCCCAGTCCCGCAGCTGCACGGCCAGGCGGCTGTTGCGG +
Preference number: 2 (lower is better)
Translates to: VSSPPRCTENCSNSA*PSQSRSCTARRLLR
Trigger: CCGCAACAGCCGCCTGGCCGTGCAGCTGCGGGACTGGGATGGCAACGCCGAGTTGCTGCAGTTCTCCGTGCACCTGGGTGGCGAGGACAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595079.5
3UTR-3UTR TCA 90 bp TCGGCGTTGCCATCCCAGTCCCGCAGCTGCACGGCCAGGCGGCTGTTGCGGTCCCCGGTTGAAGTCCACTaGGCCATCGTGGCGCCTCTG +
Preference number: 2 (lower is better)
Translates to: SALPSQSRSCTARRLLRSPVEVH*AIVAPL
Trigger: CAGAGGCGCCACGATGGCTCAGTGGACTTCAACCGG...GGACCGCAACAGCCGCCTGGCCGTGCAGCTGCGGGACTGGGATGGCAACGCCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595079.5
3UTR CAA 90 bp TCGGCGTTGCCATCCCAGTCCCGCAGCTGCACGGCCAGGCGGCTGTaGCGGTCCCCCGTGATGCTATGCACCTTCTCCAGACCCAGCCAG +
Preference number: 2 (lower is better)
Translates to: SALPSQSRSCTARRL*RSPVMLCTFSRPSQ
Trigger: CTGGCTGGGTCTGGAGAAGGTGCATAGCATCACGGGGGACCGCAACAGCCGCCTGGCCGTGCAGCTGCGGGACTGGGATGGCAACGCCGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000595079.5
3UTR-3UTR CCA 90 bp ACACAACAGCACCAGCACCATGAGGGCGCTCTCGACCCACACAAGCCCTGGTCCGCTCCTGGCAATCCCTaGGCAGCCGGTGCAGGCGGC +
Preference number: 2 (lower is better)
Translates to: TQQHQHHEGALDPHKPWSAPGNP*AAGAGG
Trigger: GCCGCCTGCACCGGCTGCCCAGGGATTGCCAGGAGC...GGACCAGGGCTTGTGTGGGTCGAGAGCGCCCTCATGGTGCTGGTGCTGTTGTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595079.5
3UTR-3UTR CCA 90 bp CACATCCTCGGGCAGAGCCAAGAGTCACCGTCTTTCGTGGGCCTGGGACCAGGCCGTCTTTCGTGGGCCTaGGACCAGGCCCAGCCAGGA +
Preference number: 2 (lower is better)
Translates to: HILGQSQESPSFVGLGPGRLSWA*DQAQPG
Trigger: TCCTGGCTGGGCCTGGTCCCAGGCCCACGAAAGACG...GCCTGGTCCCAGGCCCACGAAAGACGGTGACTCTTGGCTCTGCCCGAGGATGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
3UTR-3UTR CCA 90 bp CAGCACCAGCACCATGAGGGCGCTCTCGACCCACACAAGCCCTGGTCCCCGTCACCATTGAGGCCAGTCTaGCTGGCCCCAAGTGGTCCC +
Preference number: 2 (lower is better)
Translates to: QHQHHEGALDPHKPWSPSPLRPV*LAPSGP
Trigger: GGGACCACTTGGGGCCAGCCAGACTGGCCTCAATGG...TGACGGGGACCAGGGCTTGTGTGGGTCGAGAGCGCCCTCATGGTGCTGGTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
3UTR-3UTR CCA 90 bp CACAACAGCACCAGCACCATGAGGGCGCTCTCGACCCACACAAGCCCTGGTCCCGTGAGCCGGGTCAACTaGCTGGGCCATCTCGGGCAG +
Preference number: 2 (lower is better)
Translates to: HNSTSTMRALSTHTSPGPVSRVN*LGHLGQ
Trigger: CTGCCCGAGATGGCCCAGCCAGTTGACCCGGCTCAC...GGGACCAGGGCTTGTGTGGGTCGAGAGCGCCCTCATGGTGCTGGTGCTGTTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595079.5
3UTR-3UTR TCA 90 bp CACCAGCACCATGAGGGCGCTCTCGACCCACACAAGCCCTGGTCCCCGTCAGTCCTGGCCAGCAAGGAGTaGAGCTCCATGCCCCTTGGT +
Preference number: 2 (lower is better)
Translates to: HQHHEGALDPHKPWSPSVLASKE*SSMPLG
Trigger: ACCAAGGGGCATGGAGCTTCACTCCTTGCTGGCCAG...GACTGACGGGGACCAGGGCTTGTGTGGGTCGAGAGCGCCCTCATGGTGCTGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
3UTR-3UTR CCA 90 bp CAACTCCCTGGCCAGCAAGGAGTGAAGCTCCATGCCCCTTGGTCCACGCCTCTAGCCGGGTCAACTGGCTaGGCCATCTCGGGCAGCCTC +
Preference number: 2 (lower is better)
Translates to: QLPGQQGVKLHAPWSTPLAGSTG*AISGSL
Trigger: GAGGCTGCCCGAGATGGCCCAGCCAGTTGACCCGGC...TAGAGGCGTGGACCAAGGGGCATGGAGCTTCACTCCTTGCTGGCCAGGGAGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595079.5
3UTR-3UTR TCA 90 bp TTGGAGCCCCTGCCCAGGCAGGGAACGGCCACATCCTCGGGCAGAGCCAAGAGTCCCCGTCAGTCAATGTaGCTGAGTCCGCCATTGAGG +
Preference number: 2 (lower is better)
Translates to: LEPLPRQGTATSSGRAKSPRQSM*LSPPLR
Trigger: CCTCAATGGCGGACTCAGTCACATTGACTGACGGGG...ACTCTTGGCTCTGCCCGAGGATGTGGCCGTTCCCTGCCTGGGCAGGGGCTCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000595079.5
3UTR-3UTR CCA 90 bp GAGTCTGAGCATATCCTGCAGCCTCGATCTCAGGAGGCAACGCATGCAGCCCCCCGTCTTTCGTGGGCCTaGGACCAGGCCCAGCCAGGA +
Preference number: 2 (lower is better)
Translates to: ESEHILQPRSQEATHAAPRLSWA*DQAQPG
Trigger: TCCTGGCTGGGCCTGGTCCCAGGCCCACGAAAGACG...GGGGGCTGCATGCGTTGCCTCCTGAGATCGAGGCTGCAGGATATGCTCAGACTC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
3UTR-3UTR CCA 90 bp AGAGCCAAGAGTCACCGTCTTTCGTGGGCCTGGGACCAGGCCCAGCCAGGACGCGACCCACACAAGCCCTaGTCCCCGTCAGTCAATGTG +
Preference number: 2 (lower is better)
Translates to: RAKSHRLSWAWDQAQPGRDPHKP*SPSVNV
Trigger: CACATTGACTGACGGGGACCAGGGCTTGTGTGGGTC...GCGTCCTGGCTGGGCCTGGTCCCAGGCCCACGAAAGACGGTGACTCTTGGCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595079.5
3UTR-3UTR CCA 90 bp AGTCCCCAACTCCCTGGCCAGCAAGGAGTGAAGCTCCATGCCCCTTGGTCCACGACCTGGAACAGCTCCTaGCAATCCCTGGGCAGCCGG +
Preference number: 2 (lower is better)
Translates to: SPQLPGQQGVKLHAPWSTTWNSS*QSLGSR
Trigger: CCGGCTGCCCAGGGATTGCCAGGAGCTGTTCCAGGT...CGTGGACCAAGGGGCATGGAGCTTCACTCCTTGCTGGCCAGGGAGTTGGGGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595079.5
3UTR-3UTR TCA 90 bp GGTCGTGATCCTGGTCCCAAGTGGAGAAGGGTACGGAGAGGCCGCTGGGTGGGACACGCCTCTAGAGTCTaGGCATATCCTGCAGCCTCG +
Preference number: 2 (lower is better)
Translates to: GRDPGPKWRRVRRGRWVGHASRV*AYPAAS
Trigger: CGAGGCTGCAGGATATGCTCAGACTCTAGAGGCGTG...TCCCACCCAGCGGCCTCTCCGTACCCTTCTCCACTTGGGACCAGGATCACGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595079.5
3UTR-3UTR TCA 90 bp GCCTGCTTGTGTCCCCAGGGGACCTACACACAACAGCACCAGCACCATGAGGGCCTGGCCAGCAAGGAGTaGAGCTCCATGCCCCTTGGT +
Preference number: 2 (lower is better)
Translates to: ACLCPQGTYTQQHQHHEGLASKE*SSMPLG
Trigger: ACCAAGGGGCATGGAGCTTCACTCCTTGCTGGCCAG...GCCCTCATGGTGCTGGTGCTGTTGTGTGTAGGTCCCCTGGGGACACAAGCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
3UTR-3UTR GCA 90 bp GGCCAGCAAGGAGTGAAGCTCCATGCCCCTTGGTCCACGCCTCTAGAGTCTGAGGCAGCAACTCGGCGTTaGCATCCCAGTCCCGCAGCT +
Preference number: 2 (lower is better)
Translates to: GQQGVKLHAPWSTPLESEAATRR*HPSPAA
Trigger: AGCTGCGGGACTGGGATGGCAACGCCGAGTTGCTGC...CTCAGACTCTAGAGGCGTGGACCAAGGGGCATGGAGCTTCACTCCTTGCTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595079.5
3UTR-3UTR CCA 90 bp CCAGATACCATTGGCGCCTGCTTGTGTCCCCAGGGGACCTACACACAACAGCACCGTCTTTCGTGGGCCTaGGACCAGGCCCAGCCAGGA +
Preference number: 2 (lower is better)
Translates to: PDTIGACLCPQGTYTQQHRLSWA*DQAQPG
Trigger: TCCTGGCTGGGCCTGGTCCCAGGCCCACGAAAGACG...GTGCTGTTGTGTGTAGGTCCCCTGGGGACACAAGCAGGCGCCAATGGTATCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
3UTR-3UTR CCA 90 bp GGCCACATCCTCGGGCAGAGCCAAGAGTCACCGTCTTTCGTGGGCCTGGGACCACCACAAGTTTCCAGATaGCCCCTCCTTGGAGCCCCT +
Preference number: 2 (lower is better)
Translates to: GHILGQSQESPSFVGLGPPQVSR*PLLGAP
Trigger: AGGGGCTCCAAGGAGGGGCCATCTGGAAACTTGTGG...TGGTCCCAGGCCCACGAAAGACGGTGACTCTTGGCTCTGCCCGAGGATGTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000595079.5
3UTR-3UTR CCA 90 bp CACATCCTCGGGCAGAGCCAAGAGTCACCGTCTTTCGTGGGCCTGGGACCAGGCGAGTCCCCAACTCCCTaGCCAGCAAGGAGTGAAGCT +
Preference number: 2 (lower is better)
Translates to: HILGQSQESPSFVGLGPGESPTP*PARSEA
Trigger: AGCTTCACTCCTTGCTGGCCAGGGAGTTGGGGACTC...GCCTGGTCCCAGGCCCACGAAAGACGGTGACTCTTGGCTCTGCCCGAGGATGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
3UTR-3UTR CCA 90 bp CACATCCTCGGGCAGAGCCAAGAGTCACCGTCTTTCGTGGGCCTGGGACCAGGCGACCCACACAAGCCCTaGTCCCCGTCAGTCAATGTG +
Preference number: 2 (lower is better)
Translates to: HILGQSQESPSFVGLGPGDPHKP*SPSVNV
Trigger: CACATTGACTGACGGGGACCAGGGCTTGTGTGGGTC...GCCTGGTCCCAGGCCCACGAAAGACGGTGACTCTTGGCTCTGCCCGAGGATGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
3UTR-3UTR CCA 90 bp CTCCATGCCCCTTGGTCCACGCCTCTAGAGTCTGAGCATATCCTGCAGCCTCGAAGCCAGAACTCGCCGTaGGGATCCCCAAACCCCGCC +
Preference number: 2 (lower is better)
Translates to: LHAPWSTPLESEHILQPRSQNSP*GSPNPA
Trigger: GGCGGGGTTTGGGGATCCCCACGGCGAGTTCTGGCT...TCGAGGCTGCAGGATATGCTCAGACTCTAGAGGCGTGGACCAAGGGGCATGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000595079.5
3UTR-3UTR CCA 90 bp GCTTGTGTCCCCAGGGGACCTACACACAACAGCACCAGCACCATGAGGGCGCTCGGGCTTCTCCAGTCGTaGTCTTGGCCACATCCTCGG +
Preference number: 2 (lower is better)
Translates to: ACVPRGPTHNSTSTMRALGLLQS*SWPHPR
Trigger: CCGAGGATGTGGCCAAGACCACGACTGGAGAAGCCC...GAGCGCCCTCATGGTGCTGGTGCTGTTGTGTGTAGGTCCCCTGGGGACACAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593998.5
3UTR-3UTR GCA 90 bp CAGCACCAGCACCATGAGGGCGCTCTCGACCCACACAAGCCCTGGTCCCCGTCAAGTCTGAGCATATCCTaGAGCCTCGATCTCAGGAGG +
Preference number: 2 (lower is better)
Translates to: QHQHHEGALDPHKPWSPSSLSIS*SLDLRR
Trigger: CCTCCTGAGATCGAGGCTGCAGGATATGCTCAGACT...TGACGGGGACCAGGGCTTGTGTGGGTCGAGAGCGCCCTCATGGTGCTGGTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
3UTR-3UTR CCA 90 bp CCCAGATACCATTGGCGCCTGCTTGTGTCCCCAGGGGACCTACACACAACAGCACCATTGAGGCCAGTCTaGCTGGCCCCAAGTGGTCCC +
Preference number: 2 (lower is better)
Translates to: PRYHWRLLVSPGDLHTTAPLRPV*LAPSGP
Trigger: GGGACCACTTGGGGCCAGCCAGACTGGCCTCAATGG...TGCTGTTGTGTGTAGGTCCCCTGGGGACACAAGCAGGCGCCAATGGTATCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
3UTR-3UTR TCA 90 bp TTGTGTCCCCAGGGGACCTACACACAACAGCACCAGCACCATGAGGGCGCTCTCCACGCCTCTAGAGTCTaGGCATATCCTGCAGCCTCG +
Preference number: 2 (lower is better)
Translates to: LCPQGTYTQQHQHHEGALHASRV*AYPAAS
Trigger: CGAGGCTGCAGGATATGCTCAGACTCTAGAGGCGTG...GAGAGCGCCCTCATGGTGCTGGTGCTGTTGTGTGTAGGTCCCCTGGGGACACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
3UTR-3UTR TCA 90 bp TTGTGTCCCCAGGGGACCTACACACAACAGCACCAGCACCATGAGGGCGCTCTCCCCCGTCAGTCAATGTaGCTGAGTCCGCCATTGAGG +
Preference number: 2 (lower is better)
Translates to: LCPQGTYTQQHQHHEGALPRQSM*LSPPLR
Trigger: CCTCAATGGCGGACTCAGTCACATTGACTGACGGGG...GAGAGCGCCCTCATGGTGCTGGTGCTGTTGTGTGTAGGTCCCCTGGGGACACAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
3UTR-3UTR GCA 90 bp CACCAGCACCATGAGGGCGCTCTCGACCCACACAAGCCCTGGTCCCCGTCAGTCTCAAATAGTCCACTCTaGCTCTCCCCAACCTGGAAC +
Preference number: 2 (lower is better)
Translates to: HQHHEGALDPHKPWSPSVSNSPL*LSPTWN
Trigger: GTTCCAGGTTGGGGAGAGGCAGAGTGGACTATTTGA...GACTGACGGGGACCAGGGCTTGTGTGGGTCGAGAGCGCCCTCATGGTGCTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595079.5
3UTR-3UTR GCA 90 bp AGTTCTTGTCCCTGCGGAGGTCGTGATCCTGGTCCCAAGTGGAGAAGGGTACGGTCCTCGCCACCCAGGTaGACGGAGAACTGCAGCAAC +
Preference number: 2 (lower is better)
Translates to: SSCPCGGRDPGPKWRRVRSSPPR*TENCSN
Trigger: GTTGCTGCAGTTCTCCGTGCACCTGGGTGGCGAGGA...CCGTACCCTTCTCCACTTGGGACCAGGATCACGACCTCCGCAGGGACAAGAACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595079.5
3UTR-3UTR CCA 90 bp ACACAACAGCACCAGCACCATGAGGGCGCTCTCGACCCACACAAGCCCTGGTCCAAGCTCCATGCCCCTTaGTCCACGCCTCTAGAGTCT +
Preference number: 2 (lower is better)
Translates to: TQQHQHHEGALDPHKPWSKLHAP*STPLES
Trigger: AGACTCTAGAGGCGTGGACCAAGGGGCATGGAGCTT...GGACCAGGGCTTGTGTGGGTCGAGAGCGCCCTCATGGTGCTGGTGCTGTTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
3UTR-3UTR CCA 90 bp GCGGCCCCGCCAGGTCTTCCAGAAGATTCCCTTCTTAAGCTTCTGCCGCTGCTGGAGTCCCCAACTCCCTaGCCAGCAAGGAGTGAAGCT +
Preference number: 2 (lower is better)
Translates to: AAPPGLPEDSLLKLLPLLESPTP*PARSEA
Trigger: AGCTTCACTCCTTGCTGGCCAGGGAGTTGGGGACTC...CAGCAGCGGCAGAAGCTTAAGAAGGGAATCTTCTGGAAGACCTGGCGGGGCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595079.5
3UTR-3UTR CCA 90 bp TTGTGTCCCCAGGGGACCTACACACAACAGCACCAGCACCATGAGGGCGCTCTCGACCCACACAAGCCCTaGTCCCCGTCAGTCAATGTG +
Preference number: 2 (lower is better)
Translates to: LCPQGTYTQQHQHHEGALDPHKP*SPSVNV
Trigger: CACATTGACTGACGGGGACCAGGGCTTGTGTGGGTC...GAGAGCGCCCTCATGGTGCTGGTGCTGTTGTGTGTAGGTCCCCTGGGGACACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
3UTR-3UTR CCA 90 bp CTCCATGCCCCTTGGTCCACGCCTCTAGAGTCTGAGCATATCCTGCAGCCTCGATGGGCTGGATCAACATaGTGGTGGCCTGCAGCGGGT +
Preference number: 2 (lower is better)
Translates to: LHAPWSTPLESEHILQPRWAGST*WWPAAG
Trigger: ACCCGCTGCAGGCCACCACCATGTTGATCCAGCCCA...TCGAGGCTGCAGGATATGCTCAGACTCTAGAGGCGTGGACCAAGGGGCATGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595079.5
3UTR-3UTR CCA 90 bp CACAAGCCCTGGTCCCCGTCAGTCAATGTGACTGAGTCCGCCATTGAGGCCAGTCTCCAGTCGTGGTCTTaGCCACATCCTCGGGCAGAG +
Preference number: 2 (lower is better)
Translates to: HKPWSPSVNVTESAIEASLQSWS*PHPRAE
Trigger: CTCTGCCCGAGGATGTGGCCAAGACCACGACTGGAG...ACTGGCCTCAATGGCGGACTCAGTCACATTGACTGACGGGGACCAGGGCTTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593998.5
3UTR-3UTR TCA 90 bp CCAGATACCATTGGCGCCTGCTTGTGTCCCCAGGGGACCTACACACAACAGCACCACGCCTCTAGAGTCTaGGCATATCCTGCAGCCTCG +
Preference number: 2 (lower is better)
Translates to: PDTIGACLCPQGTYTQQHHASRV*AYPAAS
Trigger: CGAGGCTGCAGGATATGCTCAGACTCTAGAGGCGTG...GTGCTGTTGTGTGTAGGTCCCCTGGGGACACAAGCAGGCGCCAATGGTATCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
3UTR-3UTR GCA 90 bp CGGCCCCGCCAGGTCTTCCAGAAGATTCCCTTCTTAAGCTTCTGCCGCTGCTGTTCCCCCGTGATGCTATaGACCTTCTCCAGACCCAGC +
Preference number: 2 (lower is better)
Translates to: RPRQVFQKIPFLSFCRCCSPVML*TFSRPS
Trigger: GCTGGGTCTGGAGAAGGTGCATAGCATCACGGGGGA...ACAGCAGCGGCAGAAGCTTAAGAAGGGAATCTTCTGGAAGACCTGGCGGGGCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595079.5
3UTR-3UTR GCA 90 bp GGCCAGCAAGGAGTGAAGCTCCATGCCCCTTGGTCCACGCCTCTAGAGTCTGAGTTAAGCTTCTGCCGCTaGTGTGGGATGGAGCGGAAG +
Preference number: 2 (lower is better)
Translates to: GQQGVKLHAPWSTPLESELSFCR*CGMERK
Trigger: CTTCCGCTCCATCCCACAGCAGCGGCAGAAGCTTAA...CTCAGACTCTAGAGGCGTGGACCAAGGGGCATGGAGCTTCACTCCTTGCTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595079.5
3UTR-3UTR GCA 90 bp CTCCATGCCCCTTGGTCCACGCCTCTAGAGTCTGAGCATATCCTGCAGCCTCGAGGAGGCTGCCTCTGCTaGCATGGGCTGGATCAACAT +
Preference number: 2 (lower is better)
Translates to: LHAPWSTPLESEHILQPRGGCLC*HGLDQH
Trigger: ATGTTGATCCAGCCCATGGCAGCAGAGGCAGCCTCC...TCGAGGCTGCAGGATATGCTCAGACTCTAGAGGCGTGGACCAAGGGGCATGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595079.5
3UTR-3UTR CCA 90 bp CCCAGATACCATTGGCGCCTGCTTGTGTCCCCAGGGGACCTACACACAACAGCAGAGTCCCCAACTCCCTaGCCAGCAAGGAGTGAAGCT +
Preference number: 2 (lower is better)
Translates to: PRYHWRLLVSPGDLHTTAESPTP*PARSEA
Trigger: AGCTTCACTCCTTGCTGGCCAGGGAGTTGGGGACTC...TGCTGTTGTGTGTAGGTCCCCTGGGGACACAAGCAGGCGCCAATGGTATCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
3UTR-3UTR CCA 90 bp GGCCAGCAAGGAGTGAAGCTCCATGCCCCTTGGTCCACGCCTCTAGAGTCTGAGCCGTTGAGGTTGGAATaGCTGCAGGTGCCAAACCAC +
Preference number: 2 (lower is better)
Translates to: GQQGVKLHAPWSTPLESEPLRLE*LQVPNH
Trigger: GTGGTTTGGCACCTGCAGCCATTCCAACCTCAACGG...CTCAGACTCTAGAGGCGTGGACCAAGGGGCATGGAGCTTCACTCCTTGCTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595079.5
3UTR CAA 90 bp TTCCAAGAACTCTGTGAGCTCCGCCCAGATACCATTGGCGCCTGCTaGTGTCCCCAGGGGACCTACACACAACAGCACCAGCACCATGAG +
Preference number: 2 (lower is better)
Translates to: FQELCELRPDTIGAC*CPQGTYTQQHQHHE
Trigger: CTCATGGTGCTGGTGCTGTTGTGTGTAGGTCCCCTGGGGACACAAGCAGGCGCCAATGGTATCTGGGCGGAGCTCACAGAGTTCTTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000593998.5
ENST00000594875.1
3UTR-3UTR GCA 90 bp TTGTGTCCCCAGGGGACCTACACACAACAGCACCAGCACCATGAGGGCGCTCTCAGTCTGAGCATATCCTaGAGCCTCGATCTCAGGAGG +
Preference number: 2 (lower is better)
Translates to: LCPQGTYTQQHQHHEGALSLSIS*SLDLRR
Trigger: CCTCCTGAGATCGAGGCTGCAGGATATGCTCAGACT...GAGAGCGCCCTCATGGTGCTGGTGCTGTTGTGTGTAGGTCCCCTGGGGACACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
3UTR-3UTR CCA 90 bp TATTCCAAGAACTCTGTGAGCTCCGCCCAGATACCATTGGCGCCTGCTTGTGTCAGTCACCGTCTTTCGTaGGCCTGGGACCAGGCCCAG +
Preference number: 2 (lower is better)
Translates to: YSKNSVSSAQIPLAPACVSHRLS*AWDQAQ
Trigger: CTGGGCCTGGTCCCAGGCCCACGAAAGACGGTGACT...GACACAAGCAGGCGCCAATGGTATCTGGGCGGAGCTCACAGAGTTCTTGGAATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301455.7
ENST00000593998.5
3UTR-3UTR CCA 90 bp GGCCAGCAAGGAGTGAAGCTCCATGCCCCTTGGTCCACGCCTCTAGAGTCTGAGGGGCTTCTCCAGTCGTaGTCTTCTTCTCTGTCCACA +
Preference number: 2 (lower is better)
Translates to: GQQGVKLHAPWSTPLESEGLLQS*SSSLST
Trigger: TGTGGACAGAGAAGAAGACCACGACTGGAGAAGCCC...CTCAGACTCTAGAGGCGTGGACCAAGGGGCATGGAGCTTCACTCCTTGCTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000595079.5
3UTR-3UTR CCA 90 bp GACCCACACAAGCCCTGGTCCCCGTCAGTCAATGTGACTGAGTCCGCCATTGAGAAGCTCCATGCCCCTTaGTCCACGCCTCTAGAGTCT +
Preference number: 2 (lower is better)
Translates to: DPHKPWSPSVNVTESAIEKLHAP*STPLES
Trigger: AGACTCTAGAGGCGTGGACCAAGGGGCATGGAGCTT...CTCAATGGCGGACTCAGTCACATTGACTGACGGGGACCAGGGCTTGTGTGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
3UTR-3UTR CCA 90 bp CGGCCCCGCCAGGTCTTCCAGAAGATTCCCTTCTTAAGCTTCTGCCGCTGCTGTAAGCTCCATGCCCCTTaGTCCACGCCTCTAGAGTCT +
Preference number: 2 (lower is better)
Translates to: RPRQVFQKIPFLSFCRCCKLHAP*STPLES
Trigger: AGACTCTAGAGGCGTGGACCAAGGGGCATGGAGCTT...ACAGCAGCGGCAGAAGCTTAAGAAGGGAATCTTCTGGAAGACCTGGCGGGGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595079.5
3UTR-3UTR GCA 90 bp CCAGATACCATTGGCGCCTGCTTGTGTCCCCAGGGGACCTACACACAACAGCACAGTCTGAGCATATCCTaGAGCCTCGATCTCAGGAGG +
Preference number: 2 (lower is better)
Translates to: PDTIGACLCPQGTYTQQHSLSIS*SLDLRR
Trigger: CCTCCTGAGATCGAGGCTGCAGGATATGCTCAGACT...GTGCTGTTGTGTGTAGGTCCCCTGGGGACACAAGCAGGCGCCAATGGTATCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
3UTR-3UTR CCA 90 bp CTGAGGTTGCTTTTATTCCAAGAACTCTGTGAGCTCCGCCCAGATACCATTGGCCGTCTTTCGTGGGCCTaGGACCAGGCCCAGCCAGGA +
Preference number: 2 (lower is better)
Translates to: LRLLLFQELCELRPDTIGRLSWA*DQAQPG
Trigger: TCCTGGCTGGGCCTGGTCCCAGGCCCACGAAAGACG...GCCAATGGTATCTGGGCGGAGCTCACAGAGTTCTTGGAATAAAAGCAACCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301455.7
ENST00000593998.5
3UTR-3UTR TCA 90 bp CTCCATGCCCCTTGGTCCACGCCTCTAGAGTCTGAGCATATCCTGCAGCCTCGAATTCCAAGAACTCTGTaGGCTCCGCCCAGATACCAT +
Preference number: 2 (lower is better)
Translates to: LHAPWSTPLESEHILQPRIPRTL*APPRYH
Trigger: ATGGTATCTGGGCGGAGCTCACAGAGTTCTTGGAAT...TCGAGGCTGCAGGATATGCTCAGACTCTAGAGGCGTGGACCAAGGGGCATGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301455.7
ENST00000593998.5
3UTR-3UTR TCA 90 bp CACAAGCCCTGGTCCCCGTCAGTCAATGTGACTGAGTCCGCCATTGAGGCCAGTAATGGCGGAGACCCCTaGGGCTGGATTTCAAATAGT +
Preference number: 2 (lower is better)
Translates to: HKPWSPSVNVTESAIEASNGGDP*GWISNS
Trigger: ACTATTTGAAATCCAGCCTCAGGGGTCTCCGCCATT...ACTGGCCTCAATGGCGGACTCAGTCACATTGACTGACGGGGACCAGGGCTTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595079.5
3UTR-3UTR CCA 90 bp TCTCCAGTCGTGGTCTTCTTCTCTGTCCACAAGTTTCCAGATGGCCCCTCCTTGCCACAAGTTTCCAGATaGCCCCTCCTTGGAGCCCCT +
Preference number: 2 (lower is better)
Translates to: SPVVVFFSVHKFPDGPSLPQVSR*PLLGAP
Trigger: AGGGGCTCCAAGGAGGGGCCATCTGGAAACTTGTGG...CAAGGAGGGGCCATCTGGAAACTTGTGGACAGAGAAGAAGACCACGACTGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000595079.5
3UTR-3UTR CCA 90 bp CTGAGGTTGCTTTTATTCCAAGAACTCTGTGAGCTCCGCCCAGATACCATTGGCCCATTGAGGCCAGTCTaGCTGGCCCCAAGTGGTCCC +
Preference number: 2 (lower is better)
Translates to: LRLLLFQELCELRPDTIGPLRPV*LAPSGP
Trigger: GGGACCACTTGGGGCCAGCCAGACTGGCCTCAATGG...GCCAATGGTATCTGGGCGGAGCTCACAGAGTTCTTGGAATAAAAGCAACCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301455.7
ENST00000593998.5
3UTR-3UTR CCA 90 bp CAAGGAGTGAAGCTCCATGCCCCTTGGTCCACGCCTCTAGAGTCTGAGCATATCGCAGTTCACCAAAAATaGCGGAGACCCCTGAGGCTG +
Preference number: 2 (lower is better)
Translates to: QGVKLHAPWSTPLESEHIAVHQK*RRPLRL
Trigger: CAGCCTCAGGGGTCTCCGCCATTTTTGGTGAACTGC...GATATGCTCAGACTCTAGAGGCGTGGACCAAGGGGCATGGAGCTTCACTCCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000595079.5
3UTR-3UTR CCA 90 bp CCCTGCACTCAGAAAGGGGGCTTCTCCAGTCGTGGTCTTCTTCTCTGTCCACAAGGGCTTCTCCAGTCGTaGTCTTCTTCTCTGTCCACA +
Preference number: 2 (lower is better)
Translates to: PCTQKGGFSSRGLLLCPQGLLQS*SSSLST
Trigger: TGTGGACAGAGAAGAAGACCACGACTGGAGAAGCCC...TTGTGGACAGAGAAGAAGACCACGACTGGAGAAGCCCCCTTTCTGAGTGCAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000595079.5
3UTR-3UTR GCA 90 bp CGGCCCCGCCAGGTCTTCCAGAAGATTCCCTTCTTAAGCTTCTGCCGCTGCTGTCATCTGAGGTCATCTTaGAGTTCACCAAAAATGGCG +
Preference number: 2 (lower is better)
Translates to: RPRQVFQKIPFLSFCRCCHLRSS*SSPKMA
Trigger: CGCCATTTTTGGTGAACTGCAAGATGACCTCAGATG...ACAGCAGCGGCAGAAGCTTAAGAAGGGAATCTTCTGGAAGACCTGGCGGGGCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595079.5
3UTR CCA 72 bp GTCCCAAGTGGAGAAGGGTACGGAGAGGCCGCTGGGTaGGACGGTGGTGGCGCCCAGCTGGCCGGCCACGGG +
Preference number: 3 (lower is better)
Translates to: VPSGEGYGEAAG*DGGGAQLAGHG
Trigger: CCCGTGGCCGGCCAGCTGGGCGCCACCACCGTCCCACCCAGCGGCCTCTCCGTACCCTTCTCCACTTGGGAC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595079.5
3UTR CCA 72 bp CCTGGTCCCAAGTGGAGAAGGGTACGGAGAGGCCGCTaGGTGGGACGGTGGTGGCGCCCAGCTGGCCGGCCA +
Preference number: 3 (lower is better)
Translates to: PGPKWRRVRRGR*VGRWWRPAGRP
Trigger: TGGCCGGCCAGCTGGGCGCCACCACCGTCCCACCCAGCGGCCTCTCCGTACCCTTCTCCACTTGGGACCAGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595079.5
3UTR GCA 72 bp TGCAGCAACTCGGCGTTGCCATCCCAGTCCCGCAGCTaGACGGCCAGGCGGCTGTTGCGGTCCCCCGTGATG +
Preference number: 3 (lower is better)
Translates to: CSNSALPSQSRS*TARRLLRSPVM
Trigger: CATCACGGGGGACCGCAACAGCCGCCTGGCCGTGCAGCTGCGGGACTGGGATGGCAACGCCGAGTTGCTGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000595079.5
3UTR GCA 72 bp CACCCAGGTGCACGGAGAACTGCAGCAACTCGGCGTTaGCATCCCAGTCCCGCAGCTGCACGGCCAGGCGGC +
Preference number: 3 (lower is better)
Translates to: HPGARRTAATRR*HPSPAAARPGG
Trigger: GCCGCCTGGCCGTGCAGCTGCGGGACTGGGATGGCAACGCCGAGTTGCTGCAGTTCTCCGTGCACCTGGGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595079.5
3UTR TCA 72 bp CAATCCCTGGGCAGCCGGTGCAGGCGGCTGACATTGTaGGCCGGGTCAACTGGCTGGGCCATCTCGGGCAGC +
Preference number: 3 (lower is better)
Translates to: QSLGSRCRRLTL*AGSTGWAISGS
Trigger: GCTGCCCGAGATGGCCCAGCCAGTTGACCCGGCTCACAATGTCAGCCGCCTGCACCGGCTGCCCAGGGATTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595079.5
3UTR CCA 72 bp AGGCTGCCTCTGCTGCCATGGGCTGGATCAACATGGTaGTGGCCTGCAGCGGGTAGTAGCGGCCCCGCCAGG +
Preference number: 3 (lower is better)
Translates to: RLPLLPWAGSTW*WPAAGSSGPAR
Trigger: CCTGGCGGGGCCGCTACTACCCGCTGCAGGCCACCACCATGTTGATCCAGCCCATGGCAGCAGAGGCAGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595079.5
3UTR CCA 72 bp AGGAGGCTGCCTCTGCTGCCATGGGCTGGATCAACATaGTGGTGGCCTGCAGCGGGTAGTAGCGGCCCCGCC +
Preference number: 3 (lower is better)
Translates to: RRLPLLPWAGST*WWPAAGSSGPA
Trigger: GGCGGGGCCGCTACTACCCGCTGCAGGCCACCACCATGTTGATCCAGCCCATGGCAGCAGAGGCAGCCTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595079.5
3UTR-3UTR CAA 90 bp CCTCGCCACCCAGGTGCACGGAGAACTGCAGCAACTCGGCGTTGCCATCCCAGTACGGCCAGGCGGCTGTaGCGGTCCCCCGTGATGCTA +
Preference number: 3 (lower is better)
Translates to: PRHPGARRTAATRRCHPSTARRL*RSPVML
Trigger: TAGCATCACGGGGGACCGCAACAGCCGCCTGGCCGT...ACTGGGATGGCAACGCCGAGTTGCTGCAGTTCTCCGTGCACCTGGGTGGCGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000595079.5
3UTR GCA 72 bp ACGGCCAGGCGGCTGTTGCGGTCCCCCGTGATGCTATaGACCTTCTCCAGACCCAGCCAGAACTCGCCGTGG +
Preference number: 3 (lower is better)
Translates to: TARRLLRSPVML*TFSRPSQNSPW
Trigger: CCACGGCGAGTTCTGGCTGGGTCTGGAGAAGGTGCATAGCATCACGGGGGACCGCAACAGCCGCCTGGCCGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000595079.5
3UTR CCA 72 bp CCGGTGCAGGCGGCTGACATTGTGAGCCGGGTCAACTaGCTGGGCCATCTCGGGCAGCCTCTTTCTTCGGGC +
Preference number: 3 (lower is better)
Translates to: PVQAADIVSRVN*LGHLGQPLSSG
Trigger: GCCCGAAGAAAGAGGCTGCCCGAGATGGCCCAGCCAGTTGACCCGGCTCACAATGTCAGCCGCCTGCACCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595079.5
3UTR CCA 72 bp CTGCCTCTGCTGCCATGGGCTGGATCAACATGGTGGTaGCCTGCAGCGGGTAGTAGCGGCCCCGCCAGGTCT +
Preference number: 3 (lower is better)
Translates to: LPLLPWAGSTWW*PAAGSSGPARS
Trigger: AGACCTGGCGGGGCCGCTACTACCCGCTGCAGGCCACCACCATGTTGATCCAGCCCATGGCAGCAGAGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595079.5
3UTR GCA 72 bp TCCACAAGTTTCCAGATGGCCCCTCCTTGGAGCCCCTaGCCAGGCAGGGAACGGCCACATCCTCGGGCAGAG +
Preference number: 3 (lower is better)
Translates to: STSFQMAPPWSP*PGRERPHPRAE
Trigger: CTCTGCCCGAGGATGTGGCCGTTCCCTGCCTGGGCAGGGGCTCCAAGGAGGGGCCATCTGGAAACTTGTGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000595079.5
3UTR CCA 72 bp TCTTGTCCCTGCGGAGGTCGTGATCCTGGTCCCAAGTaGAGAAGGGTACGGAGAGGCCGCTGGGTGGGACGG +
Preference number: 3 (lower is better)
Translates to: SCPCGGRDPGPK*RRVRRGRWVGR
Trigger: CCGTCCCACCCAGCGGCCTCTCCGTACCCTTCTCCACTTGGGACCAGGATCACGACCTCCGCAGGGACAAGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595079.5
3UTR-3UTR CAA 90 bp GGCCACATCCTCGGGCAGAGCCAAGAGTCACCGTCTTTCGTGGGCCTGGGACCAACCATTGGCGCCTGCTaGTGTCCCCAGGGGACCTAC +
Preference number: 3 (lower is better)
Translates to: GHILGQSQESPSFVGLGPTIGAC*CPQGTY
Trigger: GTAGGTCCCCTGGGGACACAAGCAGGCGCCAATGGT...TGGTCCCAGGCCCACGAAAGACGGTGACTCTTGGCTCTGCCCGAGGATGTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
3UTR-3UTR CAA 90 bp CAGCACCATGAGGGCGCTCTCGACCCACACAAGCCCTGGTCCCCGTCAGTCAATTCTCCAGTCGTGGTCTaGGCCACATCCTCGGGCAGA +
Preference number: 3 (lower is better)
Translates to: QHHEGALDPHKPWSPSVNSPVVV*ATSSGR
Trigger: TCTGCCCGAGGATGTGGCCAAGACCACGACTGGAGA...ATTGACTGACGGGGACCAGGGCTTGTGTGGGTCGAGAGCGCCCTCATGGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593998.5
3UTR TCA 72 bp TCGACCCACACAAGCCCTGGTCCCCGTCAGTCAATGTaGCTGAGTCCGCCATTGAGGCCAGTCTGGCTGGCC +
Preference number: 3 (lower is better)
Translates to: STHTSPGPRQSM*LSPPLRPVWLA
Trigger: GGCCAGCCAGACTGGCCTCAATGGCGGACTCAGTCACATTGACTGACGGGGACCAGGGCTTGTGTGGGTCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
3UTR-3UTR CAA 90 bp GCGGCCCCGCCAGGTCTTCCAGAAGATTCCCTTCTTAAGCTTCTGCCGCTGCTGGAAGCTCCATGCCCCTaGGTCCACGCCTCTAGAGTC +
Preference number: 3 (lower is better)
Translates to: AAPPGLPEDSLLKLLPLLEAPCP*VHASRV
Trigger: GACTCTAGAGGCGTGGACCAAGGGGCATGGAGCTTC...CAGCAGCGGCAGAAGCTTAAGAAGGGAATCTTCTGGAAGACCTGGCGGGGCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595079.5
3UTR TCA 72 bp CGCCTTGTAGGCTTCCCAGGGCCGGTTGAAGTCCACTaGGCCATCGTGGCGCCTCTGAATTACTGTCCAGCC +
Preference number: 3 (lower is better)
Translates to: RLVGFPGPVEVH*AIVAPLNYCPA
Trigger: GGCTGGACAGTAATTCAGAGGCGCCACGATGGCTCAGTGGACTTCAACCGGCCCTGGGAAGCCTACAAGGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595079.5
3UTR CCA 72 bp CAGCACCATGAGGGCGCTCTCGACCCACACAAGCCCTaGTCCCCGTCAGTCAATGTGACTGAGTCCGCCATT +
Preference number: 3 (lower is better)
Translates to: QHHEGALDPHKP*SPSVNVTESAI
Trigger: AATGGCGGACTCAGTCACATTGACTGACGGGGACCAGGGCTTGTGTGGGTCGAGAGCGCCCTCATGGTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
3UTR GCA 72 bp GAACTCTGTGAGCTCCGCCCAGATACCATTGGCGCCTaGTTGTGTCCCCAGGGGACCTACACACAACAGCAC +
Preference number: 3 (lower is better)
Translates to: ELCELRPDTIGA*LCPQGTYTQQH
Trigger: GTGCTGTTGTGTGTAGGTCCCCTGGGGACACAAGCAGGCGCCAATGGTATCTGGGCGGAGCTCACAGAGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000593998.5
ENST00000594875.1
3UTR CCA 72 bp CTCCCTGGCCAGCAAGGAGTGAAGCTCCATGCCCCTTaGTCCACGCCTCTAGAGTCTGAGCATATCCTGCAG +
Preference number: 3 (lower is better)
Translates to: LPGQQGVKLHAP*STPLESEHILQ
Trigger: CTGCAGGATATGCTCAGACTCTAGAGGCGTGGACCAAGGGGCATGGAGCTTCACTCCTTGCTGGCCAGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
3UTR-3UTR CAA 90 bp CTCAGAAAGGGGGCTTCTCCAGTCGTGGTCTTCTTCTCTGTCCACAAGTTTCCATGCAGCAACTCGGCGTaGCCATCCCAGTCCCGCAGC +
Preference number: 3 (lower is better)
Translates to: LRKGASPVVVFFSVHKFPCSNSA*PSQSRS
Trigger: GCTGCGGGACTGGGATGGCAACGCCGAGTTGCTGCA...TGGAAACTTGTGGACAGAGAAGAAGACCACGACTGGAGAAGCCCCCTTTCTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000595079.5
3UTR TCA 72 bp GAAGCTCCATGCCCCTTGGTCCACGCCTCTAGAGTCTaGGCATATCCTGCAGCCTCGATCTCAGGAGGCAAC +
Preference number: 3 (lower is better)
Translates to: EAPCPLVHASRV*AYPAASISGGN
Trigger: GTTGCCTCCTGAGATCGAGGCTGCAGGATATGCTCAGACTCTAGAGGCGTGGACCAAGGGGCATGGAGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
3UTR CCA 72 bp CCAGAAGATTCCCTTCTTAAGCTTCTGCCGCTGCTGTaGGATGGAGCGGAAGTACTGGCCGTTGAGGTTGGA +
Preference number: 3 (lower is better)
Translates to: PEDSLLKLLPLL*DGAEVLAVEVG
Trigger: TCCAACCTCAACGGCCAGTACTTCCGCTCCATCCCACAGCAGCGGCAGAAGCTTAAGAAGGGAATCTTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595079.5
3UTR TCA 72 bp GTCATCTTGCAGTTCACCAAAAATGGCGGAGACCCCTaGGGCTGGATTTCAAATAGTCCACTCTGCCTCTCC +
Preference number: 3 (lower is better)
Translates to: VILQFTKNGGDP*GWISNSPLCLS
Trigger: GGAGAGGCAGAGTGGACTATTTGAAATCCAGCCTCAGGGGTCTCCGCCATTTTTGGTGAACTGCAAGATGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595079.5
CDS-3UTR CCA 90 bp CGGAGAGGCCGCTGGGTGGGACGGTGGTGGCGCCCAGCTGGCCGGCCACGGGTGGCTCCTGGCAATCCCTaGGCAGCCGGTGCAGGCGGC +
Preference number: 4 (lower is better)
Translates to: RRGRWVGRWWRPAGRPRVAPGNP*AAGAGG
Trigger: GCCGCCTGCACCGGCTGCCCAGGGATTGCCAGGAGC...CACCCGTGGCCGGCCAGCTGGGCGCCACCACCGTCCCACCCAGCGGCCTCTCCG
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595079.5
CDS-3UTR CCA 90 bp GAGGCCGCTGGGTGGGACGGTGGTGGCGCCCAGCTGGCCGGCCACGGGTGCAGTGCCGCTGCTGTGGGATaGAGCGGAAGTACTGGCCGT +
Preference number: 4 (lower is better)
Translates to: EAAGWDGGGAQLAGHGCSAAAVG*SGSTGR
Trigger: ACGGCCAGTACTTCCGCTCCATCCCACAGCAGCGGC...ACTGCACCCGTGGCCGGCCAGCTGGGCGCCACCACCGTCCCACCCAGCGGCCTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595079.5
CDS-3UTR GCA 90 bp CGGAGAGGCCGCTGGGTGGGACGGTGGTGGCGCCCAGCTGGCCGGCCACGGGTGGGAGGCTGCCTCTGCTaGCATGGGCTGGATCAACAT +
Preference number: 4 (lower is better)
Translates to: RRGRWVGRWWRPAGRPRVGGCLC*HGLDQH
Trigger: ATGTTGATCCAGCCCATGGCAGCAGAGGCAGCCTCC...CACCCGTGGCCGGCCAGCTGGGCGCCACCACCGTCCCACCCAGCGGCCTCTCCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595079.5
CDS-3UTR TCA 90 bp CACCAGCACCATGAGGGCGCTCTCGACCCACACAAGCCCTGGTCCCCGTCAGTCTCCAGCGCGCTCAGCTaGCTGCGGGTGCGCTCCGCG +
Preference number: 4 (lower is better)
Translates to: HQHHEGALDPHKPWSPSVSSALS*LRVRSA
Trigger: CGCGGAGCGCACCCGCAGTCAGCTGAGCGCGCTGGA...GACTGACGGGGACCAGGGCTTGTGTGGGTCGAGAGCGCCCTCATGGTGCTGGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR TCA 90 bp GTCCCCAGGGGACCTACACACAACAGCACCAGCACCATGAGGGCGCTCTCGACCTCCAGCGCGCTCAGCTaGCTGCGGGTGCGCTCCGCG +
Preference number: 4 (lower is better)
Translates to: VPRGPTHNSTSTMRALSTSSALS*LRVRSA
Trigger: CGCGGAGCGCACCCGCAGTCAGCTGAGCGCGCTGGA...GGTCGAGAGCGCCCTCATGGTGCTGGTGCTGTTGTGTGTAGGTCCCCTGGGGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000594875.1
CDS-3UTR TCA 90 bp CCACATCCTCGGGCAGAGCCAAGAGTCACCGTCTTTCGTGGGCCTGGGACCAGGGACCCCTCGGTTCCCTaGCAGGCGGACCCGCACGCG +
Preference number: 4 (lower is better)
Translates to: PHPRAEPRVTVFRGPGTRDPSVP*QADPHA
Trigger: CGCGTGCGGGTCCGCCTGTCAGGGAACCGAGGGGTC...CCTGGTCCCAGGCCCACGAAAGACGGTGACTCTTGGCTCTGCCCGAGGATGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
CDS-3UTR CCA 90 bp CCCTGCCCAGGCAGGGAACGGCCACATCCTCGGGCAGAGCCAAGAGTCACCGTCGCCGGGTCAACTGGCTaGGCCATCTCGGGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: PCPGRERPHPRAEPRVTVAGSTG*AISGSL
Trigger: GAGGCTGCCCGAGATGGCCCAGCCAGTTGACCCGGC...GACGGTGACTCTTGGCTCTGCCCGAGGATGTGGCCGTTCCCTGCCTGGGCAGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000595079.5
CDS-3UTR CCA 90 bp CCTCGCCACCCAGGTGCACGGAGAACTGCAGCAACTCGGCGTTGCCATCCCAGTTGGGTGGGACGGTGGTaGCGCCCAGCTGGCCGGCCA +
Preference number: 4 (lower is better)
Translates to: PRHPGARRTAATRRCHPSWVGRW*RPAGRP
Trigger: TGGCCGGCCAGCTGGGCGCCACCACCGTCCCACCCA...ACTGGGATGGCAACGCCGAGTTGCTGCAGTTCTCCGTGCACCTGGGTGGCGAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595079.5
CDS-3UTR CCA 90 bp CCTCGCCACCCAGGTGCACGGAGAACTGCAGCAACTCGGCGTTGCCATCCCAGTGGAGAGGCCGCTGGGTaGGACGGTGGTGGCGCCCAG +
Preference number: 4 (lower is better)
Translates to: PRHPGARRTAATRRCHPSGEAAG*DGGGAQ
Trigger: CTGGGCGCCACCACCGTCCCACCCAGCGGCCTCTCC...ACTGGGATGGCAACGCCGAGTTGCTGCAGTTCTCCGTGCACCTGGGTGGCGAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595079.5
3UTR CAA 72 bp CCACCCAGGTGCACGGAGAACTGCAGCAACTCGGCGTaGCCATCCCAGTCCCGCAGCTGCACGGCCAGGCGG +
Preference number: 4 (lower is better)
Translates to: PPRCTENCSNSA*PSQSRSCTARR
Trigger: CCGCCTGGCCGTGCAGCTGCGGGACTGGGATGGCAACGCCGAGTTGCTGCAGTTCTCCGTGCACCTGGGTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595079.5
CDS-3UTR TCA 90 bp CACATCCTCGGGCAGAGCCAAGAGTCACCGTCTTTCGTGGGCCTGGGACCAGGCTGCACGGGTCCGCCCTaGGCGCTCAGTAGCACGGCG +
Preference number: 4 (lower is better)
Translates to: HILGQSQESPSFVGLGPGCTGPP*ALSSTA
Trigger: CGCCGTGCTACTGAGCGCTCAGGGCGGACCCGTGCA...GCCTGGTCCCAGGCCCACGAAAGACGGTGACTCTTGGCTCTGCCCGAGGATGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR TCA 90 bp CTGAGTCCCCAACTCCCTGGCCAGCAAGGAGTGAAGCTCCATGCCCCTTGGTCCTCCAGCGCGCTCAGCTaGCTGCGGGTGCGCTCCGCG +
Preference number: 4 (lower is better)
Translates to: LSPQLPGQQGVKLHAPWSSSALS*LRVRSA
Trigger: CGCGGAGCGCACCCGCAGTCAGCTGAGCGCGCTGGA...GGACCAAGGGGCATGGAGCTTCACTCCTTGCTGGCCAGGGAGTTGGGGACTCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR TCA 90 bp GCTCTCGACCCACACAAGCCCTGGTCCCCGTCAGTCAATGTGACTGAGTCCGCCTCCAGCGCGCTCAGCTaGCTGCGGGTGCGCTCCGCG +
Preference number: 4 (lower is better)
Translates to: ALDPHKPWSPSVNVTESASSALS*LRVRSA
Trigger: CGCGGAGCGCACCCGCAGTCAGCTGAGCGCGCTGGA...GGCGGACTCAGTCACATTGACTGACGGGGACCAGGGCTTGTGTGGGTCGAGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR TCA 90 bp TCTGTGAGCTCCGCCCAGATACCATTGGCGCCTGCTTGTGTCCCCAGGGGACCTGACCCCTCGGTTCCCTaGCAGGCGGACCCGCACGCG +
Preference number: 4 (lower is better)
Translates to: SVSSAQIPLAPACVPRGPDPSVP*QADPHA
Trigger: CGCGTGCGGGTCCGCCTGTCAGGGAACCGAGGGGTC...AGGTCCCCTGGGGACACAAGCAGGCGCCAATGGTATCTGGGCGGAGCTCACAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000593998.5
ENST00000594875.1
CDS-3UTR GCA 90 bp CACAACAGCACCAGCACCATGAGGGCGCTCTCGACCCACACAAGCCCTGGTCCCGCAGAGCATCAGGGCTaGCCCGGCCGTCGGAGCACC +
Preference number: 4 (lower is better)
Translates to: HNSTSTMRALSTHTSPGPAEHQG*PGRRST
Trigger: GGTGCTCCGACGGCCGGGGCAGCCCTGATGCTCTGC...GGGACCAGGGCTTGTGTGGGTCGAGAGCGCCCTCATGGTGCTGGTGCTGTTGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR GCA 90 bp GGGAACGGCCACATCCTCGGGCAGAGCCAAGAGTCACCGTCTTTCGTGGGCCTGAGCCCCTGGCCGAGCTaGAGGAGTCCGTGCGCCAGG +
Preference number: 4 (lower is better)
Translates to: GNGHILGQSQESPSFVGLSPWPS*RSPCAR
Trigger: CCTGGCGCACGGACTCCTGCAGCTCGGCCAGGGGCT...CAGGCCCACGAAAGACGGTGACTCTTGGCTCTGCCCGAGGATGTGGCCGTTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000595079.5
CDS-3UTR GCA 90 bp ACATCCTCGGGCAGAGCCAAGAGTCACCGTCTTTCGTGGGCCTGGGACCAGGCCAGCCCCTGGCCGAGCTaGAGGAGTCCGTGCGCCAGG +
Preference number: 4 (lower is better)
Translates to: TSSGRAKSHRLSWAWDQASPWPS*RSPCAR
Trigger: CCTGGCGCACGGACTCCTGCAGCTCGGCCAGGGGCT...GGCCTGGTCCCAGGCCCACGAAAGACGGTGACTCTTGGCTCTGCCCGAGGATGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR GCA 90 bp CAGCACCAGCACCATGAGGGCGCTCTCGACCCACACAAGCCCTGGTCCCCGTCATCCCAGTCCCGCAGCTaGACGGCCAGGCGGCTGTTG +
Preference number: 4 (lower is better)
Translates to: QHQHHEGALDPHKPWSPSSQSRS*TARRLL
Trigger: CAACAGCCGCCTGGCCGTGCAGCTGCGGGACTGGGA...TGACGGGGACCAGGGCTTGTGTGGGTCGAGAGCGCCCTCATGGTGCTGGTGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR GCA 90 bp GCAGAGCCAAGAGTCACCGTCTTTCGTGGGCCTGGGACCAGGCCCAGCCAGGACTCCCAGTCCCGCAGCTaGACGGCCAGGCGGCTGTTG +
Preference number: 4 (lower is better)
Translates to: AEPRVTVFRGPGTRPSQDSQSRS*TARRLL
Trigger: CAACAGCCGCCTGGCCGTGCAGCTGCGGGACTGGGA...GTCCTGGCTGGGCCTGGTCCCAGGCCCACGAAAGACGGTGACTCTTGGCTCTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR CCA 90 bp GTCCCCAGGGGACCTACACACAACAGCACCAGCACCATGAGGGCGCTCTCGACCGCTCCTGGCAATCCCTaGGCAGCCGGTGCAGGCGGC +
Preference number: 4 (lower is better)
Translates to: VPRGPTHNSTSTMRALSTAPGNP*AAGAGG
Trigger: GCCGCCTGCACCGGCTGCCCAGGGATTGCCAGGAGC...GGTCGAGAGCGCCCTCATGGTGCTGGTGCTGTTGTGTGTAGGTCCCCTGGGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301455.7
ENST00000593998.5
CDS-3UTR CCA 90 bp GCCTGCTTGTGTCCCCAGGGGACCTACACACAACAGCACCAGCACCATGAGGGCGTGGTGGCGCCCAGCTaGCCGGCCACGGGTGCAGTG +
Preference number: 4 (lower is better)
Translates to: ACLCPQGTYTQQHQHHEGVVAPS*PATGAV
Trigger: CACTGCACCCGTGGCCGGCCAGCTGGGCGCCACCAC...GCCCTCATGGTGCTGGTGCTGTTGTGTGTAGGTCCCCTGGGGACACAAGCAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
CDS-3UTR CCA 90 bp CTGAGTCCCCAACTCCCTGGCCAGCAAGGAGTGAAGCTCCATGCCCCTTGGTCCGTGGTGGCGCCCAGCTaGCCGGCCACGGGTGCAGTG +
Preference number: 4 (lower is better)
Translates to: LSPQLPGQQGVKLHAPWSVVAPS*PATGAV
Trigger: CACTGCACCCGTGGCCGGCCAGCTGGGCGCCACCAC...GGACCAAGGGGCATGGAGCTTCACTCCTTGCTGGCCAGGGAGTTGGGGACTCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR CCA 90 bp CAGGCAGGGAACGGCCACATCCTCGGGCAGAGCCAAGAGTCACCGTCTTTCGTGGTGGTGGCGCCCAGCTaGCCGGCCACGGGTGCAGTG +
Preference number: 4 (lower is better)
Translates to: QAGNGHILGQSQESPSFVVVAPS*PATGAV
Trigger: CACTGCACCCGTGGCCGGCCAGCTGGGCGCCACCAC...CACGAAAGACGGTGACTCTTGGCTCTGCCCGAGGATGTGGCCGTTCCCTGCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000595079.5
CDS-3UTR CCA 90 bp GAGCTCCGCCCAGATACCATTGGCGCCTGCTTGTGTCCCCAGGGGACCTACACATGGGTGGGACGGTGGTaGCGCCCAGCTGGCCGGCCA +
Preference number: 4 (lower is better)
Translates to: ELRPDTIGACLCPQGTYTWVGRW*RPAGRP
Trigger: TGGCCGGCCAGCTGGGCGCCACCACCGTCCCACCCA...TGTGTAGGTCCCCTGGGGACACAAGCAGGCGCCAATGGTATCTGGGCGGAGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301455.7
ENST00000593998.5
CDS-3UTR CCA 90 bp ACACAACAGCACCAGCACCATGAGGGCGCTCTCGACCCACACAAGCCCTGGTCCTGGGTGGGACGGTGGTaGCGCCCAGCTGGCCGGCCA +
Preference number: 4 (lower is better)
Translates to: TQQHQHHEGALDPHKPWSWVGRW*RPAGRP
Trigger: TGGCCGGCCAGCTGGGCGCCACCACCGTCCCACCCA...GGACCAGGGCTTGTGTGGGTCGAGAGCGCCCTCATGGTGCTGGTGCTGTTGTGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR CCA 90 bp AGCTCCGCCCAGATACCATTGGCGCCTGCTTGTGTCCCCAGGGGACCTACACACTGGGTGGGACGGTGGTaGCGCCCAGCTGGCCGGCCA +
Preference number: 4 (lower is better)
Translates to: SSAQIPLAPACVPRGPTHWVGRW*RPAGRP
Trigger: TGGCCGGCCAGCTGGGCGCCACCACCGTCCCACCCA...GTGTGTAGGTCCCCTGGGGACACAAGCAGGCGCCAATGGTATCTGGGCGGAGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301455.7
ENST00000593998.5
CDS-3UTR TCA 90 bp TCCGCCCAGATACCATTGGCGCCTGCTTGTGTCCCCAGGGGACCTACACACAACTCCAGCGCGCTCAGCTaGCTGCGGGTGCGCTCCGCG +
Preference number: 4 (lower is better)
Translates to: SAQIPLAPACVPRGPTHNSSALS*LRVRSA
Trigger: CGCGGAGCGCACCCGCAGTCAGCTGAGCGCGCTGGA...GTTGTGTGTAGGTCCCCTGGGGACACAAGCAGGCGCCAATGGTATCTGGGCGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000593998.5
ENST00000594875.1
CDS-3UTR TCA 90 bp GAGGCCGCTGGGTGGGACGGTGGTGGCGCCCAGCTGGCCGGCCACGGGTGCAGTAATGGCGGAGACCCCTaGGGCTGGATTTCAAATAGT +
Preference number: 4 (lower is better)
Translates to: EAAGWDGGGAQLAGHGCSNGGDP*GWISNS
Trigger: ACTATTTGAAATCCAGCCTCAGGGGTCTCCGCCATT...ACTGCACCCGTGGCCGGCCAGCTGGGCGCCACCACCGTCCCACCCAGCGGCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595079.5
CDS-3UTR TCA 90 bp CCCTGCCCAGGCAGGGAACGGCCACATCCTCGGGCAGAGCCAAGAGTCACCGTCCCGGTTGAAGTCCACTaGGCCATCGTGGCGCCTCTG +
Preference number: 4 (lower is better)
Translates to: PCPGRERPHPRAEPRVTVPVEVH*AIVAPL
Trigger: CAGAGGCGCCACGATGGCTCAGTGGACTTCAACCGG...GACGGTGACTCTTGGCTCTGCCCGAGGATGTGGCCGTTCCCTGCCTGGGCAGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000595079.5
CDS-3UTR GCA 90 bp GAGCTCCGCCCAGATACCATTGGCGCCTGCTTGTGTCCCCAGGGGACCTACACAAGCCCCTGGCCGAGCTaGAGGAGTCCGTGCGCCAGG +
Preference number: 4 (lower is better)
Translates to: ELRPDTIGACLCPQGTYTSPWPS*RSPCAR
Trigger: CCTGGCGCACGGACTCCTGCAGCTCGGCCAGGGGCT...TGTGTAGGTCCCCTGGGGACACAAGCAGGCGCCAATGGTATCTGGGCGGAGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000593998.5
ENST00000594875.1
CDS-3UTR GCA 90 bp TCGGGCAGAGCCAAGAGTCACCGTCTTTCGTGGGCCTGGGACCAGGCCCAGCCATCAGCTGACTGCGGGTaGGCTCCGCGTGTTCGCGCA +
Preference number: 4 (lower is better)
Translates to: SGRAKSHRLSWAWDQAQPSADCG*APRVRA
Trigger: TGCGCGAACACGCGGAGCGCACCCGCAGTCAGCTGA...TGGCTGGGCCTGGTCCCAGGCCCACGAAAGACGGTGACTCTTGGCTCTGCCCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR GCA 90 bp TTGGAGCCCCTGCCCAGGCAGGGAACGGCCACATCCTCGGGCAGAGCCAAGAGTTCAGCTGACTGCGGGTaGGCTCCGCGTGTTCGCGCA +
Preference number: 4 (lower is better)
Translates to: LEPLPRQGTATSSGRAKSSADCG*APRVRA
Trigger: TGCGCGAACACGCGGAGCGCACCCGCAGTCAGCTGA...ACTCTTGGCTCTGCCCGAGGATGTGGCCGTTCCCTGCCTGGGCAGGGGCTCCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000595079.5
CDS-3UTR GCA 90 bp CCTTGGAGCCCCTGCCCAGGCAGGGAACGGCCACATCCTCGGGCAGAGCCAAGAGCAGCAACTCGGCGTTaGCATCCCAGTCCCGCAGCT +
Preference number: 4 (lower is better)
Translates to: PWSPCPGRERPHPRAEPRAATRR*HPSPAA
Trigger: AGCTGCGGGACTGGGATGGCAACGCCGAGTTGCTGC...TCTTGGCTCTGCCCGAGGATGTGGCCGTTCCCTGCCTGGGCAGGGGCTCCAAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000595079.5
CDS-3UTR CCA 90 bp GTCCCCAGGGGACCTACACACAACAGCACCAGCACCATGAGGGCGCTCTCGACCGCCGGGTCAACTGGCTaGGCCATCTCGGGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: VPRGPTHNSTSTMRALSTAGSTG*AISGSL
Trigger: GAGGCTGCCCGAGATGGCCCAGCCAGTTGACCCGGC...GGTCGAGAGCGCCCTCATGGTGCTGGTGCTGTTGTGTGTAGGTCCCCTGGGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
CDS-3UTR CCA 90 bp AACTCTGTGAGCTCCGCCCAGATACCATTGGCGCCTGCTTGTGTCCCCAGGGGAGGAGAGGCCGCTGGGTaGGACGGTGGTGGCGCCCAG +
Preference number: 4 (lower is better)
Translates to: NSVSSAQIPLAPACVPRGGEAAG*DGGGAQ
Trigger: CTGGGCGCCACCACCGTCCCACCCAGCGGCCTCTCC...TCCCCTGGGGACACAAGCAGGCGCCAATGGTATCTGGGCGGAGCTCACAGAGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301455.7
ENST00000593998.5
CDS-3UTR CCA 90 bp TCTTCTCTGTCCACAAGTTTCCAGATGGCCCCTCCTTGGAGCCCCTGCCCAGGCGGAGAGGCCGCTGGGTaGGACGGTGGTGGCGCCCAG +
Preference number: 4 (lower is better)
Translates to: SSLSTSFQMAPPWSPCPGGEAAG*DGGGAQ
Trigger: CTGGGCGCCACCACCGTCCCACCCAGCGGCCTCTCC...GCCTGGGCAGGGGCTCCAAGGAGGGGCCATCTGGAAACTTGTGGACAGAGAAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000595079.5
CDS-3UTR CCA 90 bp TACACACAACAGCACCAGCACCATGAGGGCGCTCTCGACCCACACAAGCCCTGGGGAGAGGCCGCTGGGTaGGACGGTGGTGGCGCCCAG +
Preference number: 4 (lower is better)
Translates to: YTQQHQHHEGALDPHKPWGEAAG*DGGGAQ
Trigger: CTGGGCGCCACCACCGTCCCACCCAGCGGCCTCTCC...CCAGGGCTTGTGTGGGTCGAGAGCGCCCTCATGGTGCTGGTGCTGTTGTGTGTA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR CCA 90 bp GAGGGCGCTCTCGACCCACACAAGCCCTGGTCCCCGTCAGTCAATGTGACTGAGGTACGGAGAGGCCGCTaGGTGGGACGGTGGTGGCGC +
Preference number: 4 (lower is better)
Translates to: EGALDPHKPWSPSVNVTEVRRGR*VGRWWR
Trigger: GCGCCACCACCGTCCCACCCAGCGGCCTCTCCGTAC...CTCAGTCACATTGACTGACGGGGACCAGGGCTTGTGTGGGTCGAGAGCGCCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR CCA 90 bp GCAGAGCCAAGAGTCACCGTCTTTCGTGGGCCTGGGACCAGGCCCAGCCAGGACCGTCTTTCGTGGGCCTaGGACCAGGCCCAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: AEPRVTVFRGPGTRPSQDRLSWA*DQAQPG
Trigger: TCCTGGCTGGGCCTGGTCCCAGGCCCACGAAAGACG...GTCCTGGCTGGGCCTGGTCCCAGGCCCACGAAAGACGGTGACTCTTGGCTCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR CCA 90 bp AGAGCCAAGAGTCACCGTCTTTCGTGGGCCTGGGACCAGGCCCAGCCAGGACGCCGTCTTTCGTGGGCCTaGGACCAGGCCCAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: RAKSHRLSWAWDQAQPGRRLSWA*DQAQPG
Trigger: TCCTGGCTGGGCCTGGTCCCAGGCCCACGAAAGACG...GCGTCCTGGCTGGGCCTGGTCCCAGGCCCACGAAAGACGGTGACTCTTGGCTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595079.5
3UTR CAA 72 bp CCATCCCAGTCCCGCAGCTGCACGGCCAGGCGGCTGTaGCGGTCCCCCGTGATGCTATGCACCTTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: PSQSRSCTARRL*RSPVMLCTFSR
Trigger: TCTGGAGAAGGTGCATAGCATCACGGGGGACCGCAACAGCCGCCTGGCCGTGCAGCTGCGGGACTGGGATGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000595079.5
CDS-3UTR TCA 90 bp GGACCTACACACAACAGCACCAGCACCATGAGGGCGCTCTCGACCCACACAAGCTGCACGGGTCCGCCCTaGGCGCTCAGTAGCACGGCG +
Preference number: 4 (lower is better)
Translates to: GPTHNSTSTMRALSTHTSCTGPP*ALSSTA
Trigger: CGCCGTGCTACTGAGCGCTCAGGGCGGACCCGTGCA...GCTTGTGTGGGTCGAGAGCGCCCTCATGGTGCTGGTGCTGTTGTGTGTAGGTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
CDS-3UTR TCA 90 bp GCCCCTTGGTCCACGCCTCTAGAGTCTGAGCATATCCTGCAGCCTCGATCTCAGGACCCCTCGGTTCCCTaGCAGGCGGACCCGCACGCG +
Preference number: 4 (lower is better)
Translates to: APWSTPLESEHILQPRSQDPSVP*QADPHA
Trigger: CGCGTGCGGGTCCGCCTGTCAGGGAACCGAGGGGTC...CTGAGATCGAGGCTGCAGGATATGCTCAGACTCTAGAGGCGTGGACCAAGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
CDS-3UTR TCA 90 bp GCCGGGTCAACTGGCTGGGCCATCTCGGGCAGCCTCTTTCTTCGGGCAGGCTTGAGGCGGCTGACATTGTaGGCCGGGTCAACTGGCTGG +
Preference number: 4 (lower is better)
Translates to: AGSTGWAISGSLFLRAGLRRLTL*AGSTGW
Trigger: CCAGCCAGTTGACCCGGCTCACAATGTCAGCCGCCT...CAAGCCTGCCCGAAGAAAGAGGCTGCCCGAGATGGCCCAGCCAGTTGACCCGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595079.5
CDS-3UTR TCA 90 bp CACAACAGCACCAGCACCATGAGGGCGCTCTCGACCCACACAAGCCCTGGTCCCCCCAAGTGGTCCCTCTaGGTCCCCAACTCCCTGGCC +
Preference number: 4 (lower is better)
Translates to: HNSTSTMRALSTHTSPGPPKWSL*VPNSLA
Trigger: GGCCAGGGAGTTGGGGACTCAGAGGGACCACTTGGG...GGGACCAGGGCTTGTGTGGGTCGAGAGCGCCCTCATGGTGCTGGTGCTGTTGTG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR TCA 90 bp CCCAGGGGACCTACACACAACAGCACCAGCACCATGAGGGCGCTCTCGACCCACCCCAAGTGGTCCCTCTaGGTCCCCAACTCCCTGGCC +
Preference number: 4 (lower is better)
Translates to: PRGPTHNSTSTMRALSTHPKWSL*VPNSLA
Trigger: GGCCAGGGAGTTGGGGACTCAGAGGGACCACTTGGG...GTGGGTCGAGAGCGCCCTCATGGTGCTGGTGCTGTTGTGTGTAGGTCCCCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
CDS-3UTR TCA 90 bp AGCCGGGTCAACTGGCTGGGCCATCTCGGGCAGCCTCTTTCTTCGGGCAGGCTTCCCAAGTGGTCCCTCTaGGTCCCCAACTCCCTGGCC +
Preference number: 4 (lower is better)
Translates to: SRVNWLGHLGQPLSSGRLPKWSL*VPNSLA
Trigger: GGCCAGGGAGTTGGGGACTCAGAGGGACCACTTGGG...AAGCCTGCCCGAAGAAAGAGGCTGCCCGAGATGGCCCAGCCAGTTGACCCGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595079.5
CDS-3UTR TCA 90 bp TTGGAGCCCCTGCCCAGGCAGGGAACGGCCACATCCTCGGGCAGAGCCAAGAGTACAGCACCAGCACCATaGGGGCGCTCTCGACCCACA +
Preference number: 4 (lower is better)
Translates to: LEPLPRQGTATSSGRAKSTAPAP*GRSRPT
Trigger: TGTGGGTCGAGAGCGCCCTCATGGTGCTGGTGCTGT...ACTCTTGGCTCTGCCCGAGGATGTGGCCGTTCCCTGCCTGGGCAGGGGCTCCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000595079.5
CDS-3UTR GCA 90 bp GCCAGGACGCTAGGAGGCTGCCTCTGCTGCCATGGGCTGGATCAACATGGTGGTGCGCGCTCAGCTGACTaGGGGTGCGCTCCGCGTGTT +
Preference number: 4 (lower is better)
Translates to: ARTLGGCLCCHGLDQHGGARSAD*GCAPRV
Trigger: AACACGCGGAGCGCACCCGCAGTCAGCTGAGCGCGC...ACCACCATGTTGATCCAGCCCATGGCAGCAGAGGCAGCCTCCTAGCGTCCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595079.5
CDS-3UTR GCA 90 bp GTCCCCAGGGGACCTACACACAACAGCACCAGCACCATGAGGGCGCTCTCGACCTGCTGCTTCTCCAGGTaGCGCTGCTGCTGGGCCACC +
Preference number: 4 (lower is better)
Translates to: VPRGPTHNSTSTMRALSTCCFSR*RCCWAT
Trigger: GGTGGCCCAGCAGCAGCGGCACCTGGAGAAGCAGCA...GGTCGAGAGCGCCCTCATGGTGCTGGTGCTGTTGTGTGTAGGTCCCCTGGGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000594875.1
CDS-3UTR GCA 90 bp CCTCGCCACCCAGGTGCACGGAGAACTGCAGCAACTCGGCGTTGCCATCCCAGTTGCTGCTTCTCCAGGTaGCGCTGCTGCTGGGCCACC +
Preference number: 4 (lower is better)
Translates to: PRHPGARRTAATRRCHPSCCFSR*RCCWAT
Trigger: GGTGGCCCAGCAGCAGCGGCACCTGGAGAAGCAGCA...ACTGGGATGGCAACGCCGAGTTGCTGCAGTTCTCCGTGCACCTGGGTGGCGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595079.5
CDS-3UTR GCA 90 bp CAGCACCATGAGGGCGCTCTCGACCCACACAAGCCCTGGTCCCCGTCAGTCAATTCCCAGTCCCGCAGCTaGACGGCCAGGCGGCTGTTG +
Preference number: 4 (lower is better)
Translates to: QHHEGALDPHKPWSPSVNSQSRS*TARRLL
Trigger: CAACAGCCGCCTGGCCGTGCAGCTGCGGGACTGGGA...ATTGACTGACGGGGACCAGGGCTTGTGTGGGTCGAGAGCGCCCTCATGGTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR CCA 90 bp GGAACGGCCACATCCTCGGGCAGAGCCAAGAGTCACCGTCTTTCGTGGGCCTGGTCAGTAGCACGGCGGTaGCGGCGCAGAGCATCAGGG +
Preference number: 4 (lower is better)
Translates to: GTATSSGRAKSHRLSWAWSVARR*RRRASG
Trigger: CCCTGATGCTCTGCGCCGCCACCGCCGTGCTACTGA...CCAGGCCCACGAAAGACGGTGACTCTTGGCTCTGCCCGAGGATGTGGCCGTTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000595079.5
CDS-3UTR CCA 90 bp CACAACAGCACCAGCACCATGAGGGCGCTCTCGACCCACACAAGCCCTGGTCCCTCAGTAGCACGGCGGTaGCGGCGCAGAGCATCAGGG +
Preference number: 4 (lower is better)
Translates to: HNSTSTMRALSTHTSPGPSVARR*RRRASG
Trigger: CCCTGATGCTCTGCGCCGCCACCGCCGTGCTACTGA...GGGACCAGGGCTTGTGTGGGTCGAGAGCGCCCTCATGGTGCTGGTGCTGTTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR CCA 90 bp CTCCCTGGCCAGCAAGGAGTGAAGCTCCATGCCCCTTGGTCCACGCCTCTAGAGTGTTCGCGCAGCCCCTaGCCGAGCTGCAGGAGTCCG +
Preference number: 4 (lower is better)
Translates to: LPGQQGVKLHAPWSTPLECSRSP*PSCRSP
Trigger: CGGACTCCTGCAGCTCGGCCAGGGGCTGCGCGAACA...CTCTAGAGGCGTGGACCAAGGGGCATGGAGCTTCACTCCTTGCTGGCCAGGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR CCA 90 bp TTGGAGCCCCTGCCCAGGCAGGGAACGGCCACATCCTCGGGCAGAGCCAAGAGTCTAACGGGAGGTCGGTaGACCCCTCGGTTCCCTGAC +
Preference number: 4 (lower is better)
Translates to: LEPLPRQGTATSSGRAKSLTGGR*TPRFPD
Trigger: GTCAGGGAACCGAGGGGTCCACCGACCTCCCGTTAG...ACTCTTGGCTCTGCCCGAGGATGTGGCCGTTCCCTGCCTGGGCAGGGGCTCCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301455.7
ENST00000393962.6
CDS-3UTR CCA 90 bp GGGCTGGATCAACATGGTGGTGGCCTGCAGCGGGTAGTAGCGGCCCCGCCAGGTAGGTGCCGCTGCTGCTaGGCCACCTTGTGGAAGAGT +
Preference number: 4 (lower is better)
Translates to: GLDQHGGGLQRVVAAPPGRCRCC*ATLWKS
Trigger: ACTCTTCCACAAGGTGGCCCAGCAGCAGCGGCACCT...ACCTGGCGGGGCCGCTACTACCCGCTGCAGGCCACCACCATGTTGATCCAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595079.5
CDS-3UTR CCA 90 bp GAGCTGCAGGCTATAGGCCGTGTCCTCGCCACCCAGGTGCACGGAGAACTGCAGGTGAGCCGGGTCAACTaGCTGGGCCATCTCGGGCAG +
Preference number: 4 (lower is better)
Translates to: ELQAIGRVLATQVHGELQVSRVN*LGHLGQ
Trigger: CTGCCCGAGATGGCCCAGCCAGTTGACCCGGCTCAC...CTGCAGTTCTCCGTGCACCTGGGTGGCGAGGACACGGCCTATAGCCTGCAGCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595079.5
CDS-3UTR CCA 90 bp CGCCCAGATACCATTGGCGCCTGCTTGTGTCCCCAGGGGACCTACACACAACAGGCTCCTGGCAATCCCTaGGCAGCCGGTGCAGGCGGC +
Preference number: 4 (lower is better)
Translates to: RPDTIGACLCPQGTYTQQAPGNP*AAGAGG
Trigger: GCCGCCTGCACCGGCTGCCCAGGGATTGCCAGGAGC...CTGTTGTGTGTAGGTCCCCTGGGGACACAAGCAGGCGCCAATGGTATCTGGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301455.7
ENST00000593998.5
CDS-3UTR CCA 90 bp GAGTCTGAGCATATCCTGCAGCCTCGATCTCAGGAGGCAACGCATGCAGCCCCCGTACGGAGAGGCCGCTaGGTGGGACGGTGGTGGCGC +
Preference number: 4 (lower is better)
Translates to: ESEHILQPRSQEATHAAPVRRGR*VGRWWR
Trigger: GCGCCACCACCGTCCCACCCAGCGGCCTCTCCGTAC...GGGGGCTGCATGCGTTGCCTCCTGAGATCGAGGCTGCAGGATATGCTCAGACTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR TCA 90 bp CAAGAACTCTGTGAGCTCCGCCCAGATACCATTGGCGCCTGCTTGTGTCCCCAGTGCACGGGTCCGCCCTaGGCGCTCAGTAGCACGGCG +
Preference number: 4 (lower is better)
Translates to: QELCELRPDTIGACLCPQCTGPP*ALSSTA
Trigger: CGCCGTGCTACTGAGCGCTCAGGGCGGACCCGTGCA...CTGGGGACACAAGCAGGCGCCAATGGTATCTGGGCGGAGCTCACAGAGTTCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301455.7
ENST00000593998.5
CDS-3UTR TCA 90 bp CATGCCCCTTGGTCCACGCCTCTAGAGTCTGAGCATATCCTGCAGCCTCGATCTGACCCCTCGGTTCCCTaGCAGGCGGACCCGCACGCG +
Preference number: 4 (lower is better)
Translates to: HAPWSTPLESEHILQPRSDPSVP*QADPHA
Trigger: CGCGTGCGGGTCCGCCTGTCAGGGAACCGAGGGGTC...AGATCGAGGCTGCAGGATATGCTCAGACTCTAGAGGCGTGGACCAAGGGGCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
CDS-3UTR TCA 90 bp TCGGCGTTGCCATCCCAGTCCCGCAGCTGCACGGCCAGGCGGCTGTTGCGGTCCTGGCTTTGCAGATGCTaGATTCGCAGGTGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: SALPSQSRSCTARRLLRSWLCRC*IRRCCF
Trigger: GAAGCAGCACCTGCGAATTCAGCATCTGCAAAGCCA...GGACCGCAACAGCCGCCTGGCCGTGCAGCTGCGGGACTGGGATGGCAACGCCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595079.5
CDS-3UTR TCA 90 bp CACATCCTCGGGCAGAGCCAAGAGTCACCGTCTTTCGTGGGCCTGGGACCAGGCAGGCGGCTGACATTGTaGGCCGGGTCAACTGGCTGG +
Preference number: 4 (lower is better)
Translates to: HILGQSQESPSFVGLGPGRRLTL*AGSTGW
Trigger: CCAGCCAGTTGACCCGGCTCACAATGTCAGCCGCCT...GCCTGGTCCCAGGCCCACGAAAGACGGTGACTCTTGGCTCTGCCCGAGGATGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR TCA 90 bp CCCAGGGGACCTACACACAACAGCACCAGCACCATGAGGGCGCTCTCGACCCACCCGGTTGAAGTCCACTaGGCCATCGTGGCGCCTCTG +
Preference number: 4 (lower is better)
Translates to: PRGPTHNSTSTMRALSTHPVEVH*AIVAPL
Trigger: CAGAGGCGCCACGATGGCTCAGTGGACTTCAACCGG...GTGGGTCGAGAGCGCCCTCATGGTGCTGGTGCTGTTGTGTGTAGGTCCCCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
CDS-3UTR TCA 90 bp CACAACAGCACCAGCACCATGAGGGCGCTCTCGACCCACACAAGCCCTGGTCCCCCGGTTGAAGTCCACTaGGCCATCGTGGCGCCTCTG +
Preference number: 4 (lower is better)
Translates to: HNSTSTMRALSTHTSPGPPVEVH*AIVAPL
Trigger: CAGAGGCGCCACGATGGCTCAGTGGACTTCAACCGG...GGGACCAGGGCTTGTGTGGGTCGAGAGCGCCCTCATGGTGCTGGTGCTGTTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR TCA 90 bp TCGGGCAGAGCCAAGAGTCACCGTCTTTCGTGGGCCTGGGACCAGGCCCAGCCACTGGCCAGCAAGGAGTaGAGCTCCATGCCCCTTGGT +
Preference number: 4 (lower is better)
Translates to: SGRAKSHRLSWAWDQAQPLASKE*SSMPLG
Trigger: ACCAAGGGGCATGGAGCTTCACTCCTTGCTGGCCAG...TGGCTGGGCCTGGTCCCAGGCCCACGAAAGACGGTGACTCTTGGCTCTGCCCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR TCA 90 bp GCCGTGTCCTCGCCACCCAGGTGCACGGAGAACTGCAGCAACTCGGCGTTGCCACTGGCCAGCAAGGAGTaGAGCTCCATGCCCCTTGGT +
Preference number: 4 (lower is better)
Translates to: AVSSPPRCTENCSNSALPLASKE*SSMPLG
Trigger: ACCAAGGGGCATGGAGCTTCACTCCTTGCTGGCCAG...TGGCAACGCCGAGTTGCTGCAGTTCTCCGTGCACCTGGGTGGCGAGGACACGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595079.5
CDS-3UTR TCA 90 bp CCTTGGAGCCCCTGCCCAGGCAGGGAACGGCCACATCCTCGGGCAGAGCCAAGACCCCGTCAGTCAATGTaGCTGAGTCCGCCATTGAGG +
Preference number: 4 (lower is better)
Translates to: PWSPCPGRERPHPRAEPRPRQSM*LSPPLR
Trigger: CCTCAATGGCGGACTCAGTCACATTGACTGACGGGG...TCTTGGCTCTGCCCGAGGATGTGGCCGTTCCCTGCCTGGGCAGGGGCTCCAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000595079.5
CDS-3UTR GCA 90 bp CACATCCTCGGGCAGAGCCAAGAGTCACCGTCTTTCGTGGGCCTGGGACCAGGCCGTTGGGGTTCCAGGTaGGAGGACTGGAGACGCGGA +
Preference number: 4 (lower is better)
Translates to: HILGQSQESPSFVGLGPGRWGSR*EDWRRG
Trigger: TCCGCGTCTCCAGTCCTCGCACCTGGAACCCCAACG...GCCTGGTCCCAGGCCCACGAAAGACGGTGACTCTTGGCTCTGCCCGAGGATGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR GCA 90 bp GGACCTACACACAACAGCACCAGCACCATGAGGGCGCTCTCGACCCACACAAGCGCGCGCTCAGCTGACTaGGGGTGCGCTCCGCGTGTT +
Preference number: 4 (lower is better)
Translates to: GPTHNSTSTMRALSTHTSARSAD*GCAPRV
Trigger: AACACGCGGAGCGCACCCGCAGTCAGCTGAGCGCGC...GCTTGTGTGGGTCGAGAGCGCCCTCATGGTGCTGGTGCTGTTGTGTGTAGGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000594875.1
CDS-3UTR GCA 90 bp CCTACACACAACAGCACCAGCACCATGAGGGCGCTCTCGACCCACACAAGCCCTGCGCGCTCAGCTGACTaGGGGTGCGCTCCGCGTGTT +
Preference number: 4 (lower is better)
Translates to: PTHNSTSTMRALSTHTSPARSAD*GCAPRV
Trigger: AACACGCGGAGCGCACCCGCAGTCAGCTGAGCGCGC...AGGGCTTGTGTGGGTCGAGAGCGCCCTCATGGTGCTGGTGCTGTTGTGTGTAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000594875.1
CDS-3UTR GCA 90 bp TGCTTGTGTCCCCAGGGGACCTACACACAACAGCACCAGCACCATGAGGGCGCTGCGCGCTCAGCTGACTaGGGGTGCGCTCCGCGTGTT +
Preference number: 4 (lower is better)
Translates to: CLCPQGTYTQQHQHHEGAARSAD*GCAPRV
Trigger: AACACGCGGAGCGCACCCGCAGTCAGCTGAGCGCGC...AGCGCCCTCATGGTGCTGGTGCTGTTGTGTGTAGGTCCCCTGGGGACACAAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000594875.1
CDS-3UTR GCA 90 bp AGCTCCGCCCAGATACCATTGGCGCCTGCTTGTGTCCCCAGGGGACCTACACACTGCTGCTTCTCCAGGTaGCGCTGCTGCTGGGCCACC +
Preference number: 4 (lower is better)
Translates to: SSAQIPLAPACVPRGPTHCCFSR*RCCWAT
Trigger: GGTGGCCCAGCAGCAGCGGCACCTGGAGAAGCAGCA...GTGTGTAGGTCCCCTGGGGACACAAGCAGGCGCCAATGGTATCTGGGCGGAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000593998.5
ENST00000594875.1
CDS-3UTR GCA 90 bp CACCATGAGGGCGCTCTCGACCCACACAAGCCCTGGTCCCCGTCAGTCAATGTGTGCTGCTTCTCCAGGTaGCGCTGCTGCTGGGCCACC +
Preference number: 4 (lower is better)
Translates to: HHEGALDPHKPWSPSVNVCCFSR*RCCWAT
Trigger: GGTGGCCCAGCAGCAGCGGCACCTGGAGAAGCAGCA...CACATTGACTGACGGGGACCAGGGCTTGTGTGGGTCGAGAGCGCCCTCATGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR GCA 90 bp CCTACACACAACAGCACCAGCACCATGAGGGCGCTCTCGACCCACACAAGCCCTTCCCAGTCCCGCAGCTaGACGGCCAGGCGGCTGTTG +
Preference number: 4 (lower is better)
Translates to: PTHNSTSTMRALSTHTSPSQSRS*TARRLL
Trigger: CAACAGCCGCCTGGCCGTGCAGCTGCGGGACTGGGA...AGGGCTTGTGTGGGTCGAGAGCGCCCTCATGGTGCTGGTGCTGTTGTGTGTAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
CDS-3UTR GCA 90 bp CACCAGCACCATGAGGGCGCTCTCGACCCACACAAGCCCTGGTCCCCGTCAGTCTCCTCGCCACCCAGGTaGACGGAGAACTGCAGCAAC +
Preference number: 4 (lower is better)
Translates to: HQHHEGALDPHKPWSPSVSSPPR*TENCSN
Trigger: GTTGCTGCAGTTCTCCGTGCACCTGGGTGGCGAGGA...GACTGACGGGGACCAGGGCTTGTGTGGGTCGAGAGCGCCCTCATGGTGCTGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR GCA 90 bp CCCTGCCCAGGCAGGGAACGGCCACATCCTCGGGCAGAGCCAAGAGTCACCGTCCGCAGTTCTTGTCCCTaGGGAGGTCGTGATCCTGGT +
Preference number: 4 (lower is better)
Translates to: PCPGRERPHPRAEPRVTVRSSCP*GGRDPG
Trigger: ACCAGGATCACGACCTCCGCAGGGACAAGAACTGCG...GACGGTGACTCTTGGCTCTGCCCGAGGATGTGGCCGTTCCCTGCCTGGGCAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000595079.5
CDS-3UTR GCA 90 bp CCCTGCCCAGGCAGGGAACGGCCACATCCTCGGGCAGAGCCAAGAGTCACCGTCAGGAGTGAAGCTCCATaGCCCTTGGTCCACGCCTCT +
Preference number: 4 (lower is better)
Translates to: PCPGRERPHPRAEPRVTVRSEAP*PLVHAS
Trigger: AGAGGCGTGGACCAAGGGGCATGGAGCTTCACTCCT...GACGGTGACTCTTGGCTCTGCCCGAGGATGTGGCCGTTCCCTGCCTGGGCAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000595079.5
CDS-3UTR CCA 90 bp TACACACAACAGCACCAGCACCATGAGGGCGCTCTCGACCCACACAAGCCCTGGTGTTCGCGCAGCCCCTaGCCGAGCTGCAGGAGTCCG +
Preference number: 4 (lower is better)
Translates to: YTQQHQHHEGALDPHKPWCSRSP*PSCRSP
Trigger: CGGACTCCTGCAGCTCGGCCAGGGGCTGCGCGAACA...CCAGGGCTTGTGTGGGTCGAGAGCGCCCTCATGGTGCTGGTGCTGTTGTGTGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000594875.1
ENST00000595079.5
CDS-3UTR CCA 90 bp AGGGGACCTACACACAACAGCACCAGCACCATGAGGGCGCTCTCGACCCACACATGTTCGCGCAGCCCCTaGCCGAGCTGCAGGAGTCCG +
Preference number: 4 (lower is better)
Translates to: RGPTHNSTSTMRALSTHTCSRSP*PSCRSP
Trigger: CGGACTCCTGCAGCTCGGCCAGGGGCTGCGCGAACA...TGTGTGGGTCGAGAGCGCCCTCATGGTGCTGGTGCTGTTGTGTGTAGGTCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000594875.1
CDS-3UTR CCA 90 bp TCGGGCAGAGCCAAGAGTCACCGTCTTTCGTGGGCCTGGGACCAGGCCCAGCCAAGGTGCCGCTGCTGCTaGGCCACCTTGTGGAAGAGT +
Preference number: 4 (lower is better)
Translates to: SGRAKSHRLSWAWDQAQPRCRCC*ATLWKS
Trigger: ACTCTTCCACAAGGTGGCCCAGCAGCAGCGGCACCT...TGGCTGGGCCTGGTCCCAGGCCCACGAAAGACGGTGACTCTTGGCTCTGCCCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR CCA 90 bp GCTTGTGTCCCCAGGGGACCTACACACAACAGCACCAGCACCATGAGGGCGCTCGTGAGCCGGGTCAACTaGCTGGGCCATCTCGGGCAG +
Preference number: 4 (lower is better)
Translates to: ACVPRGPTHNSTSTMRALVSRVN*LGHLGQ
Trigger: CTGCCCGAGATGGCCCAGCCAGTTGACCCGGCTCAC...GAGCGCCCTCATGGTGCTGGTGCTGTTGTGTGTAGGTCCCCTGGGGACACAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
CDS-3UTR CCA 90 bp TGTGTCCCCAGGGGACCTACACACAACAGCACCAGCACCATGAGGGCGCTCTCGGTGAGCCGGGTCAACTaGCTGGGCCATCTCGGGCAG +
Preference number: 4 (lower is better)
Translates to: CVPRGPTHNSTSTMRALSVSRVN*LGHLGQ
Trigger: CTGCCCGAGATGGCCCAGCCAGTTGACCCGGCTCAC...CGAGAGCGCCCTCATGGTGCTGGTGCTGTTGTGTGTAGGTCCCCTGGGGACACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
CDS-3UTR CCA 90 bp GAGCTCCGCCCAGATACCATTGGCGCCTGCTTGTGTCCCCAGGGGACCTACACAGTGAGCCGGGTCAACTaGCTGGGCCATCTCGGGCAG +
Preference number: 4 (lower is better)
Translates to: ELRPDTIGACLCPQGTYTVSRVN*LGHLGQ
Trigger: CTGCCCGAGATGGCCCAGCCAGTTGACCCGGCTCAC...TGTGTAGGTCCCCTGGGGACACAAGCAGGCGCCAATGGTATCTGGGCGGAGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301455.7
ENST00000593998.5
CDS-3UTR CCA 90 bp GTCCCCAGGGGACCTACACACAACAGCACCAGCACCATGAGGGCGCTCTCGACCACCTGGAACAGCTCCTaGCAATCCCTGGGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: VPRGPTHNSTSTMRALSTTWNSS*QSLGSR
Trigger: CCGGCTGCCCAGGGATTGCCAGGAGCTGTTCCAGGT...GGTCGAGAGCGCCCTCATGGTGCTGGTGCTGTTGTGTGTAGGTCCCCTGGGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301455.7
ENST00000593998.5
CDS-3UTR CCA 90 bp GGCGCCTGCTTGTGTCCCCAGGGGACCTACACACAACAGCACCAGCACCATGAGAGCCAGAACTCGCCGTaGGGATCCCCAAACCCCGCC +
Preference number: 4 (lower is better)
Translates to: GACLCPQGTYTQQHQHHESQNSP*GSPNPA
Trigger: GGCGGGGTTTGGGGATCCCCACGGCGAGTTCTGGCT...CTCATGGTGCTGGTGCTGTTGTGTGTAGGTCCCCTGGGGACACAAGCAGGCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
CDS-3UTR CCA 90 bp TGGTCCACGCCTCTAGAGTCTGAGCATATCCTGCAGCCTCGATCTCAGGAGGCAGTGGTGGCGCCCAGCTaGCCGGCCACGGGTGCAGTG +
Preference number: 4 (lower is better)
Translates to: WSTPLESEHILQPRSQEAVVAPS*PATGAV
Trigger: CACTGCACCCGTGGCCGGCCAGCTGGGCGCCACCAC...TGCCTCCTGAGATCGAGGCTGCAGGATATGCTCAGACTCTAGAGGCGTGGACCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR CCA 90 bp ATTGGCGCCTGCTTGTGTCCCCAGGGGACCTACACACAACAGCACCAGCACCATGTACGGAGAGGCCGCTaGGTGGGACGGTGGTGGCGC +
Preference number: 4 (lower is better)
Translates to: IGACLCPQGTYTQQHQHHVRRGR*VGRWWR
Trigger: GCGCCACCACCGTCCCACCCAGCGGCCTCTCCGTAC...ATGGTGCTGGTGCTGTTGTGTGTAGGTCCCCTGGGGACACAAGCAGGCGCCAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
CDS-3UTR CCA 90 bp GGCCACATCCTCGGGCAGAGCCAAGAGTCACCGTCTTTCGTGGGCCTGGGACCACCATTGAGGCCAGTCTaGCTGGCCCCAAGTGGTCCC +
Preference number: 4 (lower is better)
Translates to: GHILGQSQESPSFVGLGPPLRPV*LAPSGP
Trigger: GGGACCACTTGGGGCCAGCCAGACTGGCCTCAATGG...TGGTCCCAGGCCCACGAAAGACGGTGACTCTTGGCTCTGCCCGAGGATGTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR TCA 90 bp CCAACTCCCTGGCCAGCAAGGAGTGAAGCTCCATGCCCCTTGGTCCACGCCTCTCGGATCACAGTCGTGTaGGGATCCGCTCAGCTCGGC +
Preference number: 4 (lower is better)
Translates to: PTPWPARSEAPCPLVHASRITVV*GSAQLG
Trigger: GCCGAGCTGAGCGGATCCTCACACGACTGTGATCCG...AGAGGCGTGGACCAAGGGGCATGGAGCTTCACTCCTTGCTGGCCAGGGAGTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301455.7
ENST00000595079.5
CDS-3UTR TCA 90 bp GAACTCTGTGAGCTCCGCCCAGATACCATTGGCGCCTGCTTGTGTCCCCAGGGGAGGCGGCTGACATTGTaGGCCGGGTCAACTGGCTGG +
Preference number: 4 (lower is better)
Translates to: ELCELRPDTIGACLCPQGRRLTL*AGSTGW
Trigger: CCAGCCAGTTGACCCGGCTCACAATGTCAGCCGCCT...CCCCTGGGGACACAAGCAGGCGCCAATGGTATCTGGGCGGAGCTCACAGAGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301455.7
ENST00000593998.5
CDS-3UTR TCA 90 bp CACAACAGCACCAGCACCATGAGGGCGCTCTCGACCCACACAAGCCCTGGTCCCCTTCCCAGGGCCGGTTaGAGTCCACTGAGCCATCGT +
Preference number: 4 (lower is better)
Translates to: HNSTSTMRALSTHTSPGPLPRAG*SPLSHR
Trigger: ACGATGGCTCAGTGGACTTCAACCGGCCCTGGGAAG...GGGACCAGGGCTTGTGTGGGTCGAGAGCGCCCTCATGGTGCTGGTGCTGTTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR TCA 90 bp GCAGAGCCAAGAGTCACCGTCTTTCGTGGGCCTGGGACCAGGCCCAGCCAGGACTGTTGCGGTCCCCCGTaGTGCTATGCACCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: AEPRVTVFRGPGTRPSQDCCGPP*CYAPSP
Trigger: TGGAGAAGGTGCATAGCATCACGGGGGACCGCAACA...GTCCTGGCTGGGCCTGGTCCCAGGCCCACGAAAGACGGTGACTCTTGGCTCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR TCA 90 bp TGTGTCCCCAGGGGACCTACACACAACAGCACCAGCACCATGAGGGCGCTCTCGTCCCTGCGGAGGTCGTaGTCCTGGTCCCAAGTGGAG +
Preference number: 4 (lower is better)
Translates to: CVPRGPTHNSTSTMRALSSLRRS*SWSQVE
Trigger: CTCCACTTGGGACCAGGATCACGACCTCCGCAGGGA...CGAGAGCGCCCTCATGGTGCTGGTGCTGTTGTGTGTAGGTCCCCTGGGGACACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
CDS-3UTR TCA 90 bp GAGGGCGCTCTCGACCCACACAAGCCCTGGTCCCCGTCAGTCAATGTGACTGAGTCCCTGCGGAGGTCGTaGTCCTGGTCCCAAGTGGAG +
Preference number: 4 (lower is better)
Translates to: EGALDPHKPWSPSVNVTESLRRS*SWSQVE
Trigger: CTCCACTTGGGACCAGGATCACGACCTCCGCAGGGA...CTCAGTCACATTGACTGACGGGGACCAGGGCTTGTGTGGGTCGAGAGCGCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR TCA 90 bp CACTCAGAAAGGGGGCTTCTCCAGTCGTGGTCTTGGCCACATCCTCGGGCAGAGCCCAAGTGGTCCCTCTaGGTCCCCAACTCCCTGGCC +
Preference number: 4 (lower is better)
Translates to: HSERGLLQSWSWPHPRAEPKWSL*VPNSLA
Trigger: GGCCAGGGAGTTGGGGACTCAGAGGGACCACTTGGG...CTCTGCCCGAGGATGTGGCCAAGACCACGACTGGAGAAGCCCCCTTTCTGAGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593998.5
CDS-3UTR TCA 90 bp GAGGGCGCTCTCGACCCACACAAGCCCTGGTCCCCGTCAGTCAATGTGACTGAGACAGCACCAGCACCATaGGGGCGCTCTCGACCCACA +
Preference number: 4 (lower is better)
Translates to: EGALDPHKPWSPSVNVTETAPAP*GRSRPT
Trigger: TGTGGGTCGAGAGCGCCCTCATGGTGCTGGTGCTGT...CTCAGTCACATTGACTGACGGGGACCAGGGCTTGTGTGGGTCGAGAGCGCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR GCA 90 bp TGTCCCCAGGGGACCTACACACAACAGCACCAGCACCATGAGGGCGCTCTCGACCGTTGGGGTTCCAGGTaGGAGGACTGGAGACGCGGA +
Preference number: 4 (lower is better)
Translates to: CPQGTYTQQHQHHEGALDRWGSR*EDWRRG
Trigger: TCCGCGTCTCCAGTCCTCGCACCTGGAACCCCAACG...GTCGAGAGCGCCCTCATGGTGCTGGTGCTGTTGTGTGTAGGTCCCCTGGGGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
CDS-3UTR GCA 90 bp AGATACCATTGGCGCCTGCTTGTGTCCCCAGGGGACCTACACACAACAGCACCAAGCCCCTGGCCGAGCTaGAGGAGTCCGTGCGCCAGG +
Preference number: 4 (lower is better)
Translates to: RYHWRLLVSPGDLHTTAPSPWPS*RSPCAR
Trigger: CCTGGCGCACGGACTCCTGCAGCTCGGCCAGGGGCT...TGGTGCTGTTGTGTGTAGGTCCCCTGGGGACACAAGCAGGCGCCAATGGTATCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000594875.1
CDS-3UTR GCA 90 bp ACACAACAGCACCAGCACCATGAGGGCGCTCTCGACCCACACAAGCCCTGGTCCGCAGCAACTCGGCGTTaGCATCCCAGTCCCGCAGCT +
Preference number: 4 (lower is better)
Translates to: TQQHQHHEGALDPHKPWSAATRR*HPSPAA
Trigger: AGCTGCGGGACTGGGATGGCAACGCCGAGTTGCTGC...GGACCAGGGCTTGTGTGGGTCGAGAGCGCCCTCATGGTGCTGGTGCTGTTGTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR GCA 90 bp AGCCGGGTCAACTGGCTGGGCCATCTCGGGCAGCCTCTTTCTTCGGGCAGGCTTTCCTCGCCACCCAGGTaGACGGAGAACTGCAGCAAC +
Preference number: 4 (lower is better)
Translates to: SRVNWLGHLGQPLSSGRLSSPPR*TENCSN
Trigger: GTTGCTGCAGTTCTCCGTGCACCTGGGTGGCGAGGA...AAGCCTGCCCGAAGAAAGAGGCTGCCCGAGATGGCCCAGCCAGTTGACCCGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595079.5
CDS-3UTR GCA 90 bp TGTGAGCTCCGCCCAGATACCATTGGCGCCTGCTTGTGTCCCCAGGGGACCTACCTGGCCGGCCACGGGTaGAGTGAGCTGCAGGCTATA +
Preference number: 4 (lower is better)
Translates to: CELRPDTIGACLCPQGTYLAGHG*SELQAI
Trigger: TATAGCCTGCAGCTCACTGCACCCGTGGCCGGCCAG...GTAGGTCCCCTGGGGACACAAGCAGGCGCCAATGGTATCTGGGCGGAGCTCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301455.7
ENST00000593998.5
CDS-3UTR GCA 90 bp CAGCACCAGCACCATGAGGGCGCTCTCGACCCACACAAGCCCTGGTCCCCGTCAGGAGGCTGCCTCTGCTaGCATGGGCTGGATCAACAT +
Preference number: 4 (lower is better)
Translates to: QHQHHEGALDPHKPWSPSGGCLC*HGLDQH
Trigger: ATGTTGATCCAGCCCATGGCAGCAGAGGCAGCCTCC...TGACGGGGACCAGGGCTTGTGTGGGTCGAGAGCGCCCTCATGGTGCTGGTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR GCA 90 bp TGTGTCCCCAGGGGACCTACACACAACAGCACCAGCACCATGAGGGCGCTCTCGAGGACGCTAGGAGGCTaGCTCTGCTGCCATGGGCTG +
Preference number: 4 (lower is better)
Translates to: CVPRGPTHNSTSTMRALSRTLGG*LCCHGL
Trigger: CAGCCCATGGCAGCAGAGGCAGCCTCCTAGCGTCCT...CGAGAGCGCCCTCATGGTGCTGGTGCTGTTGTGTGTAGGTCCCCTGGGGACACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
CDS-3UTR GCA 90 bp GGCGCCTGCTTGTGTCCCCAGGGGACCTACACACAACAGCACCAGCACCATGAGAGGACGCTAGGAGGCTaGCTCTGCTGCCATGGGCTG +
Preference number: 4 (lower is better)
Translates to: GACLCPQGTYTQQHQHHERTLGG*LCCHGL
Trigger: CAGCCCATGGCAGCAGAGGCAGCCTCCTAGCGTCCT...CTCATGGTGCTGGTGCTGTTGTGTGTAGGTCCCCTGGGGACACAAGCAGGCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
CDS-3UTR GCA 90 bp CTCCCTGGCCAGCAAGGAGTGAAGCTCCATGCCCCTTGGTCCACGCCTCTAGAGAGGACGCTAGGAGGCTaGCTCTGCTGCCATGGGCTG +
Preference number: 4 (lower is better)
Translates to: LPGQQGVKLHAPWSTPLERTLGG*LCCHGL
Trigger: CAGCCCATGGCAGCAGAGGCAGCCTCCTAGCGTCCT...CTCTAGAGGCGTGGACCAAGGGGCATGGAGCTTCACTCCTTGCTGGCCAGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR CCA 90 bp GCGGCCCCGCCAGGTCTTCCAGAAGATTCCCTTCTTAAGCTTCTGCCGCTGCTGTCAGTAGCACGGCGGTaGCGGCGCAGAGCATCAGGG +
Preference number: 4 (lower is better)
Translates to: AAPPGLPEDSLLKLLPLLSVARR*RRRASG
Trigger: CCCTGATGCTCTGCGCCGCCACCGCCGTGCTACTGA...CAGCAGCGGCAGAAGCTTAAGAAGGGAATCTTCTGGAAGACCTGGCGGGGCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595079.5
CDS-3UTR CCA 90 bp TGCTTGTGTCCCCAGGGGACCTACACACAACAGCACCAGCACCATGAGGGCGCTCAAAGCGCGGCGACTTaGACTGCACGGGTCCGCCCT +
Preference number: 4 (lower is better)
Translates to: CLCPQGTYTQQHQHHEGAQSAAT*TARVRP
Trigger: AGGGCGGACCCGTGCAGTCCAAGTCGCCGCGCTTTG...AGCGCCCTCATGGTGCTGGTGCTGTTGTGTGTAGGTCCCCTGGGGACACAAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
CDS-3UTR CCA 90 bp CCCTGCCCAGGCAGGGAACGGCCACATCCTCGGGCAGAGCCAAGAGTCACCGTCTTCTTCGGGCAGGCTTaGCCACCTCATGGTCTAGGT +
Preference number: 4 (lower is better)
Translates to: PCPGRERPHPRAEPRVTVFFGQA*PPHGLG
Trigger: ACCTAGACCATGAGGTGGCCAAGCCTGCCCGAAGAA...GACGGTGACTCTTGGCTCTGCCCGAGGATGTGGCCGTTCCCTGCCTGGGCAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000595079.5
CDS-3UTR CCA 90 bp CTCCATGCCCCTTGGTCCACGCCTCTAGAGTCTGAGCATATCCTGCAGCCTCGAGCCGGGTCAACTGGCTaGGCCATCTCGGGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: LHAPWSTPLESEHILQPRAGSTG*AISGSL
Trigger: GAGGCTGCCCGAGATGGCCCAGCCAGTTGACCCGGC...TCGAGGCTGCAGGATATGCTCAGACTCTAGAGGCGTGGACCAAGGGGCATGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR CCA 90 bp CACCAGCACCATGAGGGCGCTCTCGACCCACACAAGCCCTGGTCCCCGTCAGTCGATCCTGGTCCCAAGTaGAGAAGGGTACGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: HQHHEGALDPHKPWSPSVDPGPK*RRVRRG
Trigger: GCCTCTCCGTACCCTTCTCCACTTGGGACCAGGATC...GACTGACGGGGACCAGGGCTTGTGTGGGTCGAGAGCGCCCTCATGGTGCTGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR CCA 90 bp CAGGCAGGGAACGGCCACATCCTCGGGCAGAGCCAAGAGTCACCGTCTTTCGTGGCCGCTGCTGTGGGATaGAGCGGAAGTACTGGCCGT +
Preference number: 4 (lower is better)
Translates to: QAGNGHILGQSQESPSFVAAAVG*SGSTGR
Trigger: ACGGCCAGTACTTCCGCTCCATCCCACAGCAGCGGC...CACGAAAGACGGTGACTCTTGGCTCTGCCCGAGGATGTGGCCGTTCCCTGCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000595079.5
CDS-3UTR CCA 90 bp GCTTGTGTCCCCAGGGGACCTACACACAACAGCACCAGCACCATGAGGGCGCTCGCCGCTGCTGTGGGATaGAGCGGAAGTACTGGCCGT +
Preference number: 4 (lower is better)
Translates to: ACVPRGPTHNSTSTMRALAAAVG*SGSTGR
Trigger: ACGGCCAGTACTTCCGCTCCATCCCACAGCAGCGGC...GAGCGCCCTCATGGTGCTGGTGCTGTTGTGTGTAGGTCCCCTGGGGACACAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
CDS-3UTR CCA 90 bp GGAACGGCCACATCCTCGGGCAGAGCCAAGAGTCACCGTCTTTCGTGGGCCTGGTGGGCTGGATCAACATaGTGGTGGCCTGCAGCGGGT +
Preference number: 4 (lower is better)
Translates to: GTATSSGRAKSHRLSWAWWAGST*WWPAAG
Trigger: ACCCGCTGCAGGCCACCACCATGTTGATCCAGCCCA...CCAGGCCCACGAAAGACGGTGACTCTTGGCTCTGCCCGAGGATGTGGCCGTTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000595079.5
CDS-3UTR CCA 90 bp CTGCACTCAGAAAGGGGGCTTCTCCAGTCGTGGTCTTGGCCACATCCTCGGGCACGTCTTTCGTGGGCCTaGGACCAGGCCCAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: LHSERGLLQSWSWPHPRARLSWA*DQAQPG
Trigger: TCCTGGCTGGGCCTGGTCCCAGGCCCACGAAAGACG...TGCCCGAGGATGTGGCCAAGACCACGACTGGAGAAGCCCCCTTTCTGAGTGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593998.5
CDS-3UTR CCA 90 bp GCTCTCGACCCACACAAGCCCTGGTCCCCGTCAGTCAATGTGACTGAGTCCGCCAGTCACCGTCTTTCGTaGGCCTGGGACCAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: ALDPHKPWSPSVNVTESASHRLS*AWDQAQ
Trigger: CTGGGCCTGGTCCCAGGCCCACGAAAGACGGTGACT...GGCGGACTCAGTCACATTGACTGACGGGGACCAGGGCTTGTGTGGGTCGAGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR CCA 90 bp CTCCCTGGCCAGCAAGGAGTGAAGCTCCATGCCCCTTGGTCCACGCCTCTAGAGAGTCACCGTCTTTCGTaGGCCTGGGACCAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: LPGQQGVKLHAPWSTPLESHRLS*AWDQAQ
Trigger: CTGGGCCTGGTCCCAGGCCCACGAAAGACGGTGACT...CTCTAGAGGCGTGGACCAAGGGGCATGGAGCTTCACTCCTTGCTGGCCAGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR CCA 90 bp TCTGTGAGCTCCGCCCAGATACCATTGGCGCCTGCTTGTGTCCCCAGGGGACCTAGTCACCGTCTTTCGTaGGCCTGGGACCAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: SVSSAQIPLAPACVPRGPSHRLS*AWDQAQ
Trigger: CTGGGCCTGGTCCCAGGCCCACGAAAGACGGTGACT...AGGTCCCCTGGGGACACAAGCAGGCGCCAATGGTATCTGGGCGGAGCTCACAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301455.7
ENST00000593998.5
CDS-3UTR CCA 90 bp TCGGGCAGAGCCAAGAGTCACCGTCTTTCGTGGGCCTGGGACCAGGCCCAGCCAGACCCACACAAGCCCTaGTCCCCGTCAGTCAATGTG +
Preference number: 4 (lower is better)
Translates to: SGRAKSHRLSWAWDQAQPDPHKP*SPSVNV
Trigger: CACATTGACTGACGGGGACCAGGGCTTGTGTGGGTC...TGGCTGGGCCTGGTCCCAGGCCCACGAAAGACGGTGACTCTTGGCTCTGCCCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR CCA 90 bp TTGGAGCCCCTGCCCAGGCAGGGAACGGCCACATCCTCGGGCAGAGCCAAGAGTGACCCACACAAGCCCTaGTCCCCGTCAGTCAATGTG +
Preference number: 4 (lower is better)
Translates to: LEPLPRQGTATSSGRAKSDPHKP*SPSVNV
Trigger: CACATTGACTGACGGGGACCAGGGCTTGTGTGGGTC...ACTCTTGGCTCTGCCCGAGGATGTGGCCGTTCCCTGCCTGGGCAGGGGCTCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000595079.5
CDS-3UTR TCA 90 bp GAGCTCCGCCCAGATACCATTGGCGCCTGCTTGTGTCCCCAGGGGACCTACACATGTGTCTGCAGGCTGTaGAGGACCTCAGGGTCCACC +
Preference number: 4 (lower is better)
Translates to: ELRPDTIGACLCPQGTYTCVCRL*RTSGST
Trigger: GGTGGACCCTGAGGTCCTTCACAGCCTGCAGACACA...TGTGTAGGTCCCCTGGGGACACAAGCAGGCGCCAATGGTATCTGGGCGGAGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000593998.5
ENST00000594875.1
CDS-3UTR TCA 90 bp CACAACAGCACCAGCACCATGAGGGCGCTCTCGACCCACACAAGCCCTGGTCCCCCATCGTGGCGCCTCTaGATTACTGTCCAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: HNSTSTMRALSTHTSPGPPSWRL*ITVQPP
Trigger: TGGAGGCTGGACAGTAATTCAGAGGCGCCACGATGG...GGGACCAGGGCTTGTGTGGGTCGAGAGCGCCCTCATGGTGCTGGTGCTGTTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR TCA 90 bp ACATCCTCGGGCAGAGCCAAGAGTCACCGTCTTTCGTGGGCCTGGGACCAGGCCCCATCGTGGCGCCTCTaGATTACTGTCCAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: TSSGRAKSHRLSWAWDQAPSWRL*ITVQPP
Trigger: TGGAGGCTGGACAGTAATTCAGAGGCGCCACGATGG...GGCCTGGTCCCAGGCCCACGAAAGACGGTGACTCTTGGCTCTGCCCGAGGATGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR TCA 90 bp TCTTCTCTGTCCACAAGTTTCCAGATGGCCCCTCCTTGGAGCCCCTGCCCAGGCCCGGTTGAAGTCCACTaGGCCATCGTGGCGCCTCTG +
Preference number: 4 (lower is better)
Translates to: SSLSTSFQMAPPWSPCPGPVEVH*AIVAPL
Trigger: CAGAGGCGCCACGATGGCTCAGTGGACTTCAACCGG...GCCTGGGCAGGGGCTCCAAGGAGGGGCCATCTGGAAACTTGTGGACAGAGAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000595079.5
CDS-3UTR TCA 90 bp TGTCCCCAGGGGACCTACACACAACAGCACCAGCACCATGAGGGCGCTCTCGACCTTCCCAGGGCCGGTTaGAGTCCACTGAGCCATCGT +
Preference number: 4 (lower is better)
Translates to: CPQGTYTQQHQHHEGALDLPRAG*SPLSHR
Trigger: ACGATGGCTCAGTGGACTTCAACCGGCCCTGGGAAG...GTCGAGAGCGCCCTCATGGTGCTGGTGCTGTTGTGTGTAGGTCCCCTGGGGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
CDS-3UTR TCA 90 bp GCCTGCTTGTGTCCCCAGGGGACCTACACACAACAGCACCAGCACCATGAGGGCCTTCCCAGGGCCGGTTaGAGTCCACTGAGCCATCGT +
Preference number: 4 (lower is better)
Translates to: ACLCPQGTYTQQHQHHEGLPRAG*SPLSHR
Trigger: ACGATGGCTCAGTGGACTTCAACCGGCCCTGGGAAG...GCCCTCATGGTGCTGGTGCTGTTGTGTGTAGGTCCCCTGGGGACACAAGCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
CDS-3UTR TCA 90 bp CCTCGCCACCCAGGTGCACGGAGAACTGCAGCAACTCGGCGTTGCCATCCCAGTCACGCCTCTAGAGTCTaGGCATATCCTGCAGCCTCG +
Preference number: 4 (lower is better)
Translates to: PRHPGARRTAATRRCHPSHASRV*AYPAAS
Trigger: CGAGGCTGCAGGATATGCTCAGACTCTAGAGGCGTG...ACTGGGATGGCAACGCCGAGTTGCTGCAGTTCTCCGTGCACCTGGGTGGCGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595079.5
CDS-3UTR TCA 90 bp TGCTTGTGTCCCCAGGGGACCTACACACAACAGCACCAGCACCATGAGGGCGCTACAGCACCAGCACCATaGGGGCGCTCTCGACCCACA +
Preference number: 4 (lower is better)
Translates to: CLCPQGTYTQQHQHHEGATAPAP*GRSRPT
Trigger: TGTGGGTCGAGAGCGCCCTCATGGTGCTGGTGCTGT...AGCGCCCTCATGGTGCTGGTGCTGTTGTGTGTAGGTCCCCTGGGGACACAAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000594875.1
CDS-3UTR GCA 90 bp CACAACAGCACCAGCACCATGAGGGCGCTCTCGACCCACACAAGCCCTGGTCCCTCCCCCGTGATGCTATaGACCTTCTCCAGACCCAGC +
Preference number: 4 (lower is better)
Translates to: HNSTSTMRALSTHTSPGPSPVML*TFSRPS
Trigger: GCTGGGTCTGGAGAAGGTGCATAGCATCACGGGGGA...GGGACCAGGGCTTGTGTGGGTCGAGAGCGCCCTCATGGTGCTGGTGCTGTTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR GCA 90 bp GAGTCTGAGCATATCCTGCAGCCTCGATCTCAGGAGGCAACGCATGCAGCCCCCGCAGCAACTCGGCGTTaGCATCCCAGTCCCGCAGCT +
Preference number: 4 (lower is better)
Translates to: ESEHILQPRSQEATHAAPAATRR*HPSPAA
Trigger: AGCTGCGGGACTGGGATGGCAACGCCGAGTTGCTGC...GGGGGCTGCATGCGTTGCCTCCTGAGATCGAGGCTGCAGGATATGCTCAGACTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR GCA 90 bp CCTGGCCAGCAAGGAGTGAAGCTCCATGCCCCTTGGTCCACGCCTCTAGAGTCTCTGGCCGGCCACGGGTaGAGTGAGCTGCAGGCTATA +
Preference number: 4 (lower is better)
Translates to: PGQQGVKLHAPWSTPLESLAGHG*SELQAI
Trigger: TATAGCCTGCAGCTCACTGCACCCGTGGCCGGCCAG...AGACTCTAGAGGCGTGGACCAAGGGGCATGGAGCTTCACTCCTTGCTGGCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR GCA 90 bp GAGTCTGAGCATATCCTGCAGCCTCGATCTCAGGAGGCAACGCATGCAGCCCCCCTGGCCGGCCACGGGTaGAGTGAGCTGCAGGCTATA +
Preference number: 4 (lower is better)
Translates to: ESEHILQPRSQEATHAAPLAGHG*SELQAI
Trigger: TATAGCCTGCAGCTCACTGCACCCGTGGCCGGCCAG...GGGGGCTGCATGCGTTGCCTCCTGAGATCGAGGCTGCAGGATATGCTCAGACTC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR GCA 90 bp GGTCGTGATCCTGGTCCCAAGTGGAGAAGGGTACGGAGAGGCCGCTGGGTGGGATGGAATGGCTGCAGGTaGCAAACCACCAGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: GRDPGPKWRRVRRGRWVGWNGCR*QTTSLQ
Trigger: CTGGAGGCTGGTGGTTTGGCACCTGCAGCCATTCCA...TCCCACCCAGCGGCCTCTCCGTACCCTTCTCCACTTGGGACCAGGATCACGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595079.5
CDS-3UTR GCA 90 bp AGGCCGTGTCCTCGCCACCCAGGTGCACGGAGAACTGCAGCAACTCGGCGTTGCCCCTTCTTAAGCTTCTaGCGCTGCTGTGGGATGGAG +
Preference number: 4 (lower is better)
Translates to: RPCPRHPGARRTAATRRCPFLSF*RCCGME
Trigger: CTCCATCCCACAGCAGCGGCAGAAGCTTAAGAAGGG...GCAACGCCGAGTTGCTGCAGTTCTCCGTGCACCTGGGTGGCGAGGACACGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595079.5
CDS-3UTR GCA 90 bp GGCCACATCCTCGGGCAGAGCCAAGAGTCACCGTCTTTCGTGGGCCTGGGACCAGGAGGCTGCCTCTGCTaGCATGGGCTGGATCAACAT +
Preference number: 4 (lower is better)
Translates to: GHILGQSQESPSFVGLGPGGCLC*HGLDQH
Trigger: ATGTTGATCCAGCCCATGGCAGCAGAGGCAGCCTCC...TGGTCCCAGGCCCACGAAAGACGGTGACTCTTGGCTCTGCCCGAGGATGTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR GCA 90 bp TGTGTCCCCAGGGGACCTACACACAACAGCACCAGCACCATGAGGGCGCTCTCGGATACCATTGGCGCCTaGTTGTGTCCCCAGGGGACC +
Preference number: 4 (lower is better)
Translates to: CVPRGPTHNSTSTMRALSDTIGA*LCPQGT
Trigger: GGTCCCCTGGGGACACAAGCAGGCGCCAATGGTATC...CGAGAGCGCCCTCATGGTGCTGGTGCTGTTGTGTGTAGGTCCCCTGGGGACACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000594875.1
CDS-3UTR GCA 90 bp CCCTGCACTCAGAAAGGGGGCTTCTCCAGTCGTGGTCTTGGCCACATCCTCGGGGATACCATTGGCGCCTaGTTGTGTCCCCAGGGGACC +
Preference number: 4 (lower is better)
Translates to: PCTQKGGFSSRGLGHILGDTIGA*LCPQGT
Trigger: GGTCCCCTGGGGACACAAGCAGGCGCCAATGGTATC...CCCGAGGATGTGGCCAAGACCACGACTGGAGAAGCCCCCTTTCTGAGTGCAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000593998.5
CDS-3UTR CCA 90 bp GGCCACATCCTCGGGCAGAGCCAAGAGTCACCGTCTTTCGTGGGCCTGGGACCAGGGGTAAGACCCGCTTaGTTGCAGAAGCCGCTGGAA +
Preference number: 4 (lower is better)
Translates to: GHILGQSQESPSFVGLGPGVRPA*LQKPLE
Trigger: TTCCAGCGGCTTCTGCAACCAAGCGGGTCTTACCCC...TGGTCCCAGGCCCACGAAAGACGGTGACTCTTGGCTCTGCCCGAGGATGTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR CCA 90 bp TGGTCCACGCCTCTAGAGTCTGAGCATATCCTGCAGCCTCGATCTCAGGAGGCATGTTCGCGCAGCCCCTaGCCGAGCTGCAGGAGTCCG +
Preference number: 4 (lower is better)
Translates to: WSTPLESEHILQPRSQEACSRSP*PSCRSP
Trigger: CGGACTCCTGCAGCTCGGCCAGGGGCTGCGCGAACA...TGCCTCCTGAGATCGAGGCTGCAGGATATGCTCAGACTCTAGAGGCGTGGACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR CCA 90 bp CCTACACACAACAGCACCAGCACCATGAGGGCGCTCTCGACCCACACAAGCCCTCTAACGGGAGGTCGGTaGACCCCTCGGTTCCCTGAC +
Preference number: 4 (lower is better)
Translates to: PTHNSTSTMRALSTHTSPLTGGR*TPRFPD
Trigger: GTCAGGGAACCGAGGGGTCCACCGACCTCCCGTTAG...AGGGCTTGTGTGGGTCGAGAGCGCCCTCATGGTGCTGGTGCTGTTGTGTGTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000594875.1
CDS-3UTR CCA 90 bp CAACTCCCTGGCCAGCAAGGAGTGAAGCTCCATGCCCCTTGGTCCACGCCTCTAACCTGGAACAGCTCCTaGCAATCCCTGGGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: QLPGQQGVKLHAPWSTPLTWNSS*QSLGSR
Trigger: CCGGCTGCCCAGGGATTGCCAGGAGCTGTTCCAGGT...TAGAGGCGTGGACCAAGGGGCATGGAGCTTCACTCCTTGCTGGCCAGGGAGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000593998.5
ENST00000595079.5
CDS-3UTR CCA 90 bp CCAGATACCATTGGCGCCTGCTTGTGTCCCCAGGGGACCTACACACAACAGCACAGCCAGAACTCGCCGTaGGGATCCCCAAACCCCGCC +
Preference number: 4 (lower is better)
Translates to: PDTIGACLCPQGTYTQQHSQNSP*GSPNPA
Trigger: GGCGGGGTTTGGGGATCCCCACGGCGAGTTCTGGCT...GTGCTGTTGTGTGTAGGTCCCCTGGGGACACAAGCAGGCGCCAATGGTATCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
CDS-3UTR CCA 90 bp CACATCCTCGGGCAGAGCCAAGAGTCACCGTCTTTCGTGGGCCTGGGACCAGGCGGATCAACATGGTGGTaGCCTGCAGCGGGTAGTAGC +
Preference number: 4 (lower is better)
Translates to: HILGQSQESPSFVGLGPGGSTWW*PAAGSS
Trigger: GCTACTACCCGCTGCAGGCCACCACCATGTTGATCC...GCCTGGTCCCAGGCCCACGAAAGACGGTGACTCTTGGCTCTGCCCGAGGATGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR CCA 90 bp ACATCCTCGGGCAGAGCCAAGAGTCACCGTCTTTCGTGGGCCTGGGACCAGGCCGCTGGATCAACATGGTaGTGGCCTGCAGCGGGTAGT +
Preference number: 4 (lower is better)
Translates to: TSSGRAKSHRLSWAWDQAAGSTW*WPAAGS
Trigger: ACTACCCGCTGCAGGCCACCACCATGTTGATCCAGC...GGCCTGGTCCCAGGCCCACGAAAGACGGTGACTCTTGGCTCTGCCCGAGGATGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR CCA 90 bp GCCGGGTCAACTGGCTGGGCCATCTCGGGCAGCCTCTTTCTTCGGGCAGGCTTGAAGCTCCATGCCCCTTaGTCCACGCCTCTAGAGTCT +
Preference number: 4 (lower is better)
Translates to: AGSTGWAISGSLFLRAGLKLHAP*STPLES
Trigger: AGACTCTAGAGGCGTGGACCAAGGGGCATGGAGCTT...CAAGCCTGCCCGAAGAAAGAGGCTGCCCGAGATGGCCCAGCCAGTTGACCCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595079.5
CDS-3UTR CCA 90 bp GGAACGGCCACATCCTCGGGCAGAGCCAAGAGTCACCGTCTTTCGTGGGCCTGGGAGTCCCCAACTCCCTaGCCAGCAAGGAGTGAAGCT +
Preference number: 4 (lower is better)
Translates to: GTATSSGRAKSHRLSWAWESPTP*PARSEA
Trigger: AGCTTCACTCCTTGCTGGCCAGGGAGTTGGGGACTC...CCAGGCCCACGAAAGACGGTGACTCTTGGCTCTGCCCGAGGATGTGGCCGTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000595079.5
CDS-3UTR CCA 90 bp CCACACAAGCCCTGGTCCCCGTCAGTCAATGTGACTGAGTCCGCCATTGAGGCCCCATTGAGGCCAGTCTaGCTGGCCCCAAGTGGTCCC +
Preference number: 4 (lower is better)
Translates to: PHKPWSPSVNVTESAIEAPLRPV*LAPSGP
Trigger: GGGACCACTTGGGGCCAGCCAGACTGGCCTCAATGG...GGCCTCAATGGCGGACTCAGTCACATTGACTGACGGGGACCAGGGCTTGTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR CCA 90 bp CACAACAGCACCAGCACCATGAGGGCGCTCTCGACCCACACAAGCCCTGGTCCCGACCCACACAAGCCCTaGTCCCCGTCAGTCAATGTG +
Preference number: 4 (lower is better)
Translates to: HNSTSTMRALSTHTSPGPDPHKP*SPSVNV
Trigger: CACATTGACTGACGGGGACCAGGGCTTGTGTGGGTC...GGGACCAGGGCTTGTGTGGGTCGAGAGCGCCCTCATGGTGCTGGTGCTGTTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000594875.1
ENST00000595079.5
CDS-3UTR CCA 90 bp TGTGTCCCCAGGGGACCTACACACAACAGCACCAGCACCATGAGGGCGCTCTCGGGGCTTCTCCAGTCGTaGTCTTGGCCACATCCTCGG +
Preference number: 4 (lower is better)
Translates to: CVPRGPTHNSTSTMRALSGLLQS*SWPHPR
Trigger: CCGAGGATGTGGCCAAGACCACGACTGGAGAAGCCC...CGAGAGCGCCCTCATGGTGCTGGTGCTGTTGTGTGTAGGTCCCCTGGGGACACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000593998.5
CDS-3UTR TCA 90 bp CAAGAACTCTGTGAGCTCCGCCCAGATACCATTGGCGCCTGCTTGTGTCCCCAGCGGATCACAGTCGTGTaGGGATCCGCTCAGCTCGGC +
Preference number: 4 (lower is better)
Translates to: QELCELRPDTIGACLCPQRITVV*GSAQLG
Trigger: GCCGAGCTGAGCGGATCCTCACACGACTGTGATCCG...CTGGGGACACAAGCAGGCGCCAATGGTATCTGGGCGGAGCTCACAGAGTTCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301455.7
CDS-3UTR TCA 90 bp AGGGGACCTACACACAACAGCACCAGCACCATGAGGGCGCTCTCGACCCACACACTGGCCAGCAAGGAGTaGAGCTCCATGCCCCTTGGT +
Preference number: 4 (lower is better)
Translates to: RGPTHNSTSTMRALSTHTLASKE*SSMPLG
Trigger: ACCAAGGGGCATGGAGCTTCACTCCTTGCTGGCCAG...TGTGTGGGTCGAGAGCGCCCTCATGGTGCTGGTGCTGTTGTGTGTAGGTCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
CDS-3UTR TCA 90 bp CACAAGCCCTGGTCCCCGTCAGTCAATGTGACTGAGTCCGCCATTGAGGCCAGTACAGCACCAGCACCATaGGGGCGCTCTCGACCCACA +
Preference number: 4 (lower is better)
Translates to: HKPWSPSVNVTESAIEASTAPAP*GRSRPT
Trigger: TGTGGGTCGAGAGCGCCCTCATGGTGCTGGTGCTGT...ACTGGCCTCAATGGCGGACTCAGTCACATTGACTGACGGGGACCAGGGCTTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR GCA 90 bp GTCTTCTTCTCTGTCCACAAGTTTCCAGATGGCCCCTCCTTGGAGCCCCTGCCCCGTTGGGGTTCCAGGTaGGAGGACTGGAGACGCGGA +
Preference number: 4 (lower is better)
Translates to: VFFSVHKFPDGPSLEPLPRWGSR*EDWRRG
Trigger: TCCGCGTCTCCAGTCCTCGCACCTGGAACCCCAACG...GGGCAGGGGCTCCAAGGAGGGGCCATCTGGAAACTTGTGGACAGAGAAGAAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000595079.5
CDS-3UTR GCA 90 bp GCCCCTTGGTCCACGCCTCTAGAGTCTGAGCATATCCTGCAGCCTCGATCTCAGCGTTGGGGTTCCAGGTaGGAGGACTGGAGACGCGGA +
Preference number: 4 (lower is better)
Translates to: APWSTPLESEHILQPRSQRWGSR*EDWRRG
Trigger: TCCGCGTCTCCAGTCCTCGCACCTGGAACCCCAACG...CTGAGATCGAGGCTGCAGGATATGCTCAGACTCTAGAGGCGTGGACCAAGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR GCA 90 bp GCCAGGACGCTAGGAGGCTGCCTCTGCTGCCATGGGCTGGATCAACATGGTGGTAGCTGCAGGAGTCCGTaGGCCAGGACATTCATCTCG +
Preference number: 4 (lower is better)
Translates to: ARTLGGCLCCHGLDQHGGSCRSP*ARTFIS
Trigger: CGAGATGAATGTCCTGGCGCACGGACTCCTGCAGCT...ACCACCATGTTGATCCAGCCCATGGCAGCAGAGGCAGCCTCCTAGCGTCCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595079.5
CDS-3UTR GCA 90 bp AGATACCATTGGCGCCTGCTTGTGTCCCCAGGGGACCTACACACAACAGCACCATCAGCTGACTGCGGGTaGGCTCCGCGTGTTCGCGCA +
Preference number: 4 (lower is better)
Translates to: RYHWRLLVSPGDLHTTAPSADCG*APRVRA
Trigger: TGCGCGAACACGCGGAGCGCACCCGCAGTCAGCTGA...TGGTGCTGTTGTGTGTAGGTCCCCTGGGGACACAAGCAGGCGCCAATGGTATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000594875.1
CDS-3UTR GCA 90 bp CTCCAGTCGTGGTCTTCTTCTCTGTCCACAAGTTTCCAGATGGCCCCTCCTTGGGCGCGCTCAGCTGACTaGGGGTGCGCTCCGCGTGTT +
Preference number: 4 (lower is better)
Translates to: LQSWSSSLSTSFQMAPPWARSAD*GCAPRV
Trigger: AACACGCGGAGCGCACCCGCAGTCAGCTGAGCGCGC...CCAAGGAGGGGCCATCTGGAAACTTGTGGACAGAGAAGAAGACCACGACTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000595079.5
CDS-3UTR GCA 90 bp GGAACGGCCACATCCTCGGGCAGAGCCAAGAGTCACCGTCTTTCGTGGGCCTGGACCTCATGGTCTAGGTaGTTGTGGTCCAGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: GTATSSGRAKSHRLSWAWTSWSR*LWSRRP
Trigger: TGGCCTCCTGGACCACAAGCACCTAGACCATGAGGT...CCAGGCCCACGAAAGACGGTGACTCTTGGCTCTGCCCGAGGATGTGGCCGTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000595079.5
CDS-3UTR GCA 90 bp TGTGTCCCCAGGGGACCTACACACAACAGCACCAGCACCATGAGGGCGCTCTCGTCCCCCGTGATGCTATaGACCTTCTCCAGACCCAGC +
Preference number: 4 (lower is better)
Translates to: CVPRGPTHNSTSTMRALSSPVML*TFSRPS
Trigger: GCTGGGTCTGGAGAAGGTGCATAGCATCACGGGGGA...CGAGAGCGCCCTCATGGTGCTGGTGCTGTTGTGTGTAGGTCCCCTGGGGACACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
CDS-3UTR GCA 90 bp GAGGGCGCTCTCGACCCACACAAGCCCTGGTCCCCGTCAGTCAATGTGACTGAGTCCCCCGTGATGCTATaGACCTTCTCCAGACCCAGC +
Preference number: 4 (lower is better)
Translates to: EGALDPHKPWSPSVNVTESPVML*TFSRPS
Trigger: GCTGGGTCTGGAGAAGGTGCATAGCATCACGGGGGA...CTCAGTCACATTGACTGACGGGGACCAGGGCTTGTGTGGGTCGAGAGCGCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR GCA 90 bp GCTCTCGACCCACACAAGCCCTGGTCCCCGTCAGTCAATGTGACTGAGTCCGCCAGGTGCACGGAGAACTaGAGCAACTCGGCGTTGCCA +
Preference number: 4 (lower is better)
Translates to: ALDPHKPWSPSVNVTESARCTEN*SNSALP
Trigger: TGGCAACGCCGAGTTGCTGCAGTTCTCCGTGCACCT...GGCGGACTCAGTCACATTGACTGACGGGGACCAGGGCTTGTGTGGGTCGAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR GCA 90 bp CTCCCTGGCCAGCAAGGAGTGAAGCTCCATGCCCCTTGGTCCACGCCTCTAGAGCTAGGAGGCTGCCTCTaGTGCCATGGGCTGGATCAA +
Preference number: 4 (lower is better)
Translates to: LPGQQGVKLHAPWSTPLELGGCL*CHGLDQ
Trigger: TTGATCCAGCCCATGGCAGCAGAGGCAGCCTCCTAG...CTCTAGAGGCGTGGACCAAGGGGCATGGAGCTTCACTCCTTGCTGGCCAGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR GCA 90 bp CCAGATACCATTGGCGCCTGCTTGTGTCCCCAGGGGACCTACACACAACAGCACAGGACGCTAGGAGGCTaGCTCTGCTGCCATGGGCTG +
Preference number: 4 (lower is better)
Translates to: PDTIGACLCPQGTYTQQHRTLGG*LCCHGL
Trigger: CAGCCCATGGCAGCAGAGGCAGCCTCCTAGCGTCCT...GTGCTGTTGTGTGTAGGTCCCCTGGGGACACAAGCAGGCGCCAATGGTATCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
CDS-3UTR GCA 90 bp TTGGAGCCCCTGCCCAGGCAGGGAACGGCCACATCCTCGGGCAGAGCCAAGAGTAGTCTGAGCATATCCTaGAGCCTCGATCTCAGGAGG +
Preference number: 4 (lower is better)
Translates to: LEPLPRQGTATSSGRAKSSLSIS*SLDLRR
Trigger: CCTCCTGAGATCGAGGCTGCAGGATATGCTCAGACT...ACTCTTGGCTCTGCCCGAGGATGTGGCCGTTCCCTGCCTGGGCAGGGGCTCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000595079.5
CDS-3UTR GCA 90 bp CACCAGCACCATGAGGGCGCTCTCGACCCACACAAGCCCTGGTCCCCGTCAGTCAGTCTGAGCATATCCTaGAGCCTCGATCTCAGGAGG +
Preference number: 4 (lower is better)
Translates to: HQHHEGALDPHKPWSPSVSLSIS*SLDLRR
Trigger: CCTCCTGAGATCGAGGCTGCAGGATATGCTCAGACT...GACTGACGGGGACCAGGGCTTGTGTGGGTCGAGAGCGCCCTCATGGTGCTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR GCA 90 bp AGCTCCGCCCAGATACCATTGGCGCCTGCTTGTGTCCCCAGGGGACCTACACACAGGAGTGAAGCTCCATaGCCCTTGGTCCACGCCTCT +
Preference number: 4 (lower is better)
Translates to: SSAQIPLAPACVPRGPTHRSEAP*PLVHAS
Trigger: AGAGGCGTGGACCAAGGGGCATGGAGCTTCACTCCT...GTGTGTAGGTCCCCTGGGGACACAAGCAGGCGCCAATGGTATCTGGGCGGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301455.7
ENST00000593998.5
CDS-3UTR GCA 90 bp TCTGTGAGCTCCGCCCAGATACCATTGGCGCCTGCTTGTGTCCCCAGGGGACCTAGGAGTGAAGCTCCATaGCCCTTGGTCCACGCCTCT +
Preference number: 4 (lower is better)
Translates to: SVSSAQIPLAPACVPRGPRSEAP*PLVHAS
Trigger: AGAGGCGTGGACCAAGGGGCATGGAGCTTCACTCCT...AGGTCCCCTGGGGACACAAGCAGGCGCCAATGGTATCTGGGCGGAGCTCACAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301455.7
ENST00000593998.5
CDS-3UTR GCA 90 bp GCTCTCGACCCACACAAGCCCTGGTCCCCGTCAGTCAATGTGACTGAGTCCGCCAGGAGTGAAGCTCCATaGCCCTTGGTCCACGCCTCT +
Preference number: 4 (lower is better)
Translates to: ALDPHKPWSPSVNVTESARSEAP*PLVHAS
Trigger: AGAGGCGTGGACCAAGGGGCATGGAGCTTCACTCCT...GGCGGACTCAGTCACATTGACTGACGGGGACCAGGGCTTGTGTGGGTCGAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR CCA 90 bp CTCCATGCCCCTTGGTCCACGCCTCTAGAGTCTGAGCATATCCTGCAGCCTCGACTAACGGGAGGTCGGTaGACCCCTCGGTTCCCTGAC +
Preference number: 4 (lower is better)
Translates to: LHAPWSTPLESEHILQPRLTGGR*TPRFPD
Trigger: GTCAGGGAACCGAGGGGTCCACCGACCTCCCGTTAG...TCGAGGCTGCAGGATATGCTCAGACTCTAGAGGCGTGGACCAAGGGGCATGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
CDS-3UTR CCA 90 bp AGGGGACCTACACACAACAGCACCAGCACCATGAGGGCGCTCTCGACCCACACAAGGTGCCGCTGCTGCTaGGCCACCTTGTGGAAGAGT +
Preference number: 4 (lower is better)
Translates to: RGPTHNSTSTMRALSTHTRCRCC*ATLWKS
Trigger: ACTCTTCCACAAGGTGGCCCAGCAGCAGCGGCACCT...TGTGTGGGTCGAGAGCGCCCTCATGGTGCTGGTGCTGTTGTGTGTAGGTCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000594875.1
CDS-3UTR CCA 90 bp TCCGCCCAGATACCATTGGCGCCTGCTTGTGTCCCCAGGGGACCTACACACAACAGGTGCCGCTGCTGCTaGGCCACCTTGTGGAAGAGT +
Preference number: 4 (lower is better)
Translates to: SAQIPLAPACVPRGPTHNRCRCC*ATLWKS
Trigger: ACTCTTCCACAAGGTGGCCCAGCAGCAGCGGCACCT...GTTGTGTGTAGGTCCCCTGGGGACACAAGCAGGCGCCAATGGTATCTGGGCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000593998.5
ENST00000594875.1
CDS-3UTR CCA 90 bp ACACAACAGCACCAGCACCATGAGGGCGCTCTCGACCCACACAAGCCCTGGTCCGGCTTGGCCACCTCATaGTCTAGGTGCTTGTGGTCC +
Preference number: 4 (lower is better)
Translates to: TQQHQHHEGALDPHKPWSGLATS*SRCLWS
Trigger: GGACCACAAGCACCTAGACCATGAGGTGGCCAAGCC...GGACCAGGGCTTGTGTGGGTCGAGAGCGCCCTCATGGTGCTGGTGCTGTTGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR CCA 90 bp TCTCCAGTCGTGGTCTTCTTCTCTGTCCACAAGTTTCCAGATGGCCCCTCCTTGGTACGGAGAGGCCGCTaGGTGGGACGGTGGTGGCGC +
Preference number: 4 (lower is better)
Translates to: SPVVVFFSVHKFPDGPSLVRRGR*VGRWWR
Trigger: GCGCCACCACCGTCCCACCCAGCGGCCTCTCCGTAC...CAAGGAGGGGCCATCTGGAAACTTGTGGACAGAGAAGAAGACCACGACTGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000595079.5
CDS-3UTR CCA 90 bp CTCCCTGGCCAGCAAGGAGTGAAGCTCCATGCCCCTTGGTCCACGCCTCTAGAGCTCCAGAGAGGCTCTTaGCGCAGTTCTTGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: LPGQQGVKLHAPWSTPLELQRGS*RSSCPC
Trigger: GCAGGGACAAGAACTGCGCCAAGAGCCTCTCTGGAG...CTCTAGAGGCGTGGACCAAGGGGCATGGAGCTTCACTCCTTGCTGGCCAGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR CCA 90 bp GCAGAGCCAAGAGTCACCGTCTTTCGTGGGCCTGGGACCAGGCCCAGCCAGGACATGGAGCGGAAGTACTaGCCGTTGAGGTTGGAATGG +
Preference number: 4 (lower is better)
Translates to: AEPRVTVFRGPGTRPSQDMERKY*PLRLEW
Trigger: CCATTCCAACCTCAACGGCCAGTACTTCCGCTCCAT...GTCCTGGCTGGGCCTGGTCCCAGGCCCACGAAAGACGGTGACTCTTGGCTCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR CCA 90 bp GGCGCCTGCTTGTGTCCCCAGGGGACCTACACACAACAGCACCAGCACCATGAGGGATCAACATGGTGGTaGCCTGCAGCGGGTAGTAGC +
Preference number: 4 (lower is better)
Translates to: GACLCPQGTYTQQHQHHEGSTWW*PAAGSS
Trigger: GCTACTACCCGCTGCAGGCCACCACCATGTTGATCC...CTCATGGTGCTGGTGCTGTTGTGTGTAGGTCCCCTGGGGACACAAGCAGGCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
CDS-3UTR CCA 90 bp ACACAACAGCACCAGCACCATGAGGGCGCTCTCGACCCACACAAGCCCTGGTCCGGATCAACATGGTGGTaGCCTGCAGCGGGTAGTAGC +
Preference number: 4 (lower is better)
Translates to: TQQHQHHEGALDPHKPWSGSTWW*PAAGSS
Trigger: GCTACTACCCGCTGCAGGCCACCACCATGTTGATCC...GGACCAGGGCTTGTGTGGGTCGAGAGCGCCCTCATGGTGCTGGTGCTGTTGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR CCA 90 bp TGTGTCCCCAGGGGACCTACACACAACAGCACCAGCACCATGAGGGCGCTCTCGGCTGGATCAACATGGTaGTGGCCTGCAGCGGGTAGT +
Preference number: 4 (lower is better)
Translates to: CVPRGPTHNSTSTMRALSAGSTW*WPAAGS
Trigger: ACTACCCGCTGCAGGCCACCACCATGTTGATCCAGC...CGAGAGCGCCCTCATGGTGCTGGTGCTGTTGTGTGTAGGTCCCCTGGGGACACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
CDS-3UTR CCA 90 bp ATTGTGAGCCGGGTCAACTGGCTGGGCCATCTCGGGCAGCCTCTTTCTTCGGGCGCTGGATCAACATGGTaGTGGCCTGCAGCGGGTAGT +
Preference number: 4 (lower is better)
Translates to: IVSRVNWLGHLGQPLSSGAGSTW*WPAAGS
Trigger: ACTACCCGCTGCAGGCCACCACCATGTTGATCCAGC...GCCCGAAGAAAGAGGCTGCCCGAGATGGCCCAGCCAGTTGACCCGGCTCACAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595079.5
CDS-3UTR CCA 90 bp CGCCCAGATACCATTGGCGCCTGCTTGTGTCCCCAGGGGACCTACACACAACAGTGGGCTGGATCAACATaGTGGTGGCCTGCAGCGGGT +
Preference number: 4 (lower is better)
Translates to: RPDTIGACLCPQGTYTQQWAGST*WWPAAG
Trigger: ACCCGCTGCAGGCCACCACCATGTTGATCCAGCCCA...CTGTTGTGTGTAGGTCCCCTGGGGACACAAGCAGGCGCCAATGGTATCTGGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
CDS-3UTR CCA 90 bp CCTACACACAACAGCACCAGCACCATGAGGGCGCTCTCGACCCACACAAGCCCTTGGGCTGGATCAACATaGTGGTGGCCTGCAGCGGGT +
Preference number: 4 (lower is better)
Translates to: PTHNSTSTMRALSTHTSPWAGST*WWPAAG
Trigger: ACCCGCTGCAGGCCACCACCATGTTGATCCAGCCCA...AGGGCTTGTGTGGGTCGAGAGCGCCCTCATGGTGCTGGTGCTGTTGTGTGTAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
CDS-3UTR CCA 90 bp CACCATGAGGGCGCTCTCGACCCACACAAGCCCTGGTCCCCGTCAGTCAATGTGCTGCCTCTGCTGCCATaGGCTGGATCAACATGGTGG +
Preference number: 4 (lower is better)
Translates to: HHEGALDPHKPWSPSVNVLPLLP*AGSTWW
Trigger: CCACCATGTTGATCCAGCCCATGGCAGCAGAGGCAG...CACATTGACTGACGGGGACCAGGGCTTGTGTGGGTCGAGAGCGCCCTCATGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR CCA 90 bp GCTCTCGACCCACACAAGCCCTGGTCCCCGTCAGTCAATGTGACTGAGTCCGCCGAGTCCCCAACTCCCTaGCCAGCAAGGAGTGAAGCT +
Preference number: 4 (lower is better)
Translates to: ALDPHKPWSPSVNVTESAESPTP*PARSEA
Trigger: AGCTTCACTCCTTGCTGGCCAGGGAGTTGGGGACTC...GGCGGACTCAGTCACATTGACTGACGGGGACCAGGGCTTGTGTGGGTCGAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR CCA 90 bp GCCTGCTTGTGTCCCCAGGGGACCTACACACAACAGCACCAGCACCATGAGGGCGAGTCCCCAACTCCCTaGCCAGCAAGGAGTGAAGCT +
Preference number: 4 (lower is better)
Translates to: ACLCPQGTYTQQHQHHEGESPTP*PARSEA
Trigger: AGCTTCACTCCTTGCTGGCCAGGGAGTTGGGGACTC...GCCCTCATGGTGCTGGTGCTGTTGTGTGTAGGTCCCCTGGGGACACAAGCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
CDS-3UTR CCA 90 bp CTGAGTCCCCAACTCCCTGGCCAGCAAGGAGTGAAGCTCCATGCCCCTTGGTCCGACCCACACAAGCCCTaGTCCCCGTCAGTCAATGTG +
Preference number: 4 (lower is better)
Translates to: LSPQLPGQQGVKLHAPWSDPHKP*SPSVNV
Trigger: CACATTGACTGACGGGGACCAGGGCTTGTGTGGGTC...GGACCAAGGGGCATGGAGCTTCACTCCTTGCTGGCCAGGGAGTTGGGGACTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR CCA 90 bp GAACTCTGTGAGCTCCGCCCAGATACCATTGGCGCCTGCTTGTGTCCCCAGGGGGACCCACACAAGCCCTaGTCCCCGTCAGTCAATGTG +
Preference number: 4 (lower is better)
Translates to: ELCELRPDTIGACLCPQGDPHKP*SPSVNV
Trigger: CACATTGACTGACGGGGACCAGGGCTTGTGTGGGTC...CCCCTGGGGACACAAGCAGGCGCCAATGGTATCTGGGCGGAGCTCACAGAGTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000593998.5
ENST00000594875.1
CDS-3UTR CCA 90 bp CTGCACTCAGAAAGGGGGCTTCTCCAGTCGTGGTCTTGGCCACATCCTCGGGCACTCCAGTCGTGGTCTTaGCCACATCCTCGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: LHSERGLLQSWSWPHPRALQSWS*PHPRAE
Trigger: CTCTGCCCGAGGATGTGGCCAAGACCACGACTGGAG...TGCCCGAGGATGTGGCCAAGACCACGACTGGAGAAGCCCCCTTTCTGAGTGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593998.5
3UTR CAA 72 bp CTCTGTGAGCTCCGCCCAGATACCATTGGCGCCTGCTaGTGTCCCCAGGGGACCTACACACAACAGCACCAG +
Preference number: 4 (lower is better)
Translates to: LCELRPDTIGAC*CPQGTYTQQHQ
Trigger: CTGGTGCTGTTGTGTGTAGGTCCCCTGGGGACACAAGCAGGCGCCAATGGTATCTGGGCGGAGCTCACAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000593998.5
ENST00000594875.1
3UTR CAA 72 bp TGCCGCTGCTGTGGGATGGAGCGGAAGTACTGGCCGTaGAGGTTGGAATGGCTGCAGGTGCCAAACCACCAG +
Preference number: 4 (lower is better)
Translates to: CRCCGMERKYWP*RLEWLQVPNHQ
Trigger: CTGGTGGTTTGGCACCTGCAGCCATTCCAACCTCAACGGCCAGTACTTCCGCTCCATCCCACAGCAGCGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595079.5
CDS-3UTR TCA 90 bp GACCCACACAAGCCCTGGTCCCCGTCAGTCAATGTGACTGAGTCCGCCATTGAGTGTGTCTGCAGGCTGTaGAGGACCTCAGGGTCCACC +
Preference number: 4 (lower is better)
Translates to: DPHKPWSPSVNVTESAIECVCRL*RTSGST
Trigger: GGTGGACCCTGAGGTCCTTCACAGCCTGCAGACACA...CTCAATGGCGGACTCAGTCACATTGACTGACGGGGACCAGGGCTTGTGTGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
CDS-3UTR TCA 90 bp CCACACAAGCCCTGGTCCCCGTCAGTCAATGTGACTGAGTCCGCCATTGAGGCCCCATCGTGGCGCCTCTaGATTACTGTCCAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: PHKPWSPSVNVTESAIEAPSWRL*ITVQPP
Trigger: TGGAGGCTGGACAGTAATTCAGAGGCGCCACGATGG...GGCCTCAATGGCGGACTCAGTCACATTGACTGACGGGGACCAGGGCTTGTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR TCA 90 bp GCCCAGATACCATTGGCGCCTGCTTGTGTCCCCAGGGGACCTACACACAACAGCCACGCCTCTAGAGTCTaGGCATATCCTGCAGCCTCG +
Preference number: 4 (lower is better)
Translates to: AQIPLAPACVPRGPTHNSHASRV*AYPAAS
Trigger: CGAGGCTGCAGGATATGCTCAGACTCTAGAGGCGTG...GCTGTTGTGTGTAGGTCCCCTGGGGACACAAGCAGGCGCCAATGGTATCTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
CDS-3UTR TCA 90 bp GAGTCTGAGCATATCCTGCAGCCTCGATCTCAGGAGGCAACGCATGCAGCCCCCCACGCCTCTAGAGTCTaGGCATATCCTGCAGCCTCG +
Preference number: 4 (lower is better)
Translates to: ESEHILQPRSQEATHAAPHASRV*AYPAAS
Trigger: CGAGGCTGCAGGATATGCTCAGACTCTAGAGGCGTG...GGGGGCTGCATGCGTTGCCTCCTGAGATCGAGGCTGCAGGATATGCTCAGACTC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR TCA 90 bp CTCCATGCCCCTTGGTCCACGCCTCTAGAGTCTGAGCATATCCTGCAGCCTCGACTGGCCAGCAAGGAGTaGAGCTCCATGCCCCTTGGT +
Preference number: 4 (lower is better)
Translates to: LHAPWSTPLESEHILQPRLASKE*SSMPLG
Trigger: ACCAAGGGGCATGGAGCTTCACTCCTTGCTGGCCAG...TCGAGGCTGCAGGATATGCTCAGACTCTAGAGGCGTGGACCAAGGGGCATGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR TCA 90 bp CGCCCAGATACCATTGGCGCCTGCTTGTGTCCCCAGGGGACCTACACACAACAGCCCCGTCAGTCAATGTaGCTGAGTCCGCCATTGAGG +
Preference number: 4 (lower is better)
Translates to: RPDTIGACLCPQGTYTQQPRQSM*LSPPLR
Trigger: CCTCAATGGCGGACTCAGTCACATTGACTGACGGGG...CTGTTGTGTGTAGGTCCCCTGGGGACACAAGCAGGCGCCAATGGTATCTGGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000594875.1
CDS-3UTR TCA 90 bp TGCTTGTGTCCCCAGGGGACCTACACACAACAGCACCAGCACCATGAGGGCGCTCCCCGTCAGTCAATGTaGCTGAGTCCGCCATTGAGG +
Preference number: 4 (lower is better)
Translates to: CLCPQGTYTQQHQHHEGAPRQSM*LSPPLR
Trigger: CCTCAATGGCGGACTCAGTCACATTGACTGACGGGG...AGCGCCCTCATGGTGCTGGTGCTGTTGTGTGTAGGTCCCCTGGGGACACAAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000594875.1
CDS-3UTR GCA 90 bp CAACTCCCTGGCCAGCAAGGAGTGAAGCTCCATGCCCCTTGGTCCACGCCTCTAAGCTGCAGGAGTCCGTaGGCCAGGACATTCATCTCG +
Preference number: 4 (lower is better)
Translates to: QLPGQQGVKLHAPWSTPLSCRSP*ARTFIS
Trigger: CGAGATGAATGTCCTGGCGCACGGACTCCTGCAGCT...TAGAGGCGTGGACCAAGGGGCATGGAGCTTCACTCCTTGCTGGCCAGGGAGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR GCA 90 bp CCTACACACAACAGCACCAGCACCATGAGGGCGCTCTCGACCCACACAAGCCCTAGCTGCAGGAGTCCGTaGGCCAGGACATTCATCTCG +
Preference number: 4 (lower is better)
Translates to: PTHNSTSTMRALSTHTSPSCRSP*ARTFIS
Trigger: CGAGATGAATGTCCTGGCGCACGGACTCCTGCAGCT...AGGGCTTGTGTGGGTCGAGAGCGCCCTCATGGTGCTGGTGCTGTTGTGTGTAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000594875.1
CDS-3UTR GCA 90 bp CAAGGAGTGAAGCTCCATGCCCCTTGGTCCACGCCTCTAGAGTCTGAGCATATCTCAGCTGACTGCGGGTaGGCTCCGCGTGTTCGCGCA +
Preference number: 4 (lower is better)
Translates to: QGVKLHAPWSTPLESEHISADCG*APRVRA
Trigger: TGCGCGAACACGCGGAGCGCACCCGCAGTCAGCTGA...GATATGCTCAGACTCTAGAGGCGTGGACCAAGGGGCATGGAGCTTCACTCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR GCA 90 bp CATGCCCCTTGGTCCACGCCTCTAGAGTCTGAGCATATCCTGCAGCCTCGATCTGCAGCAACTCGGCGTTaGCATCCCAGTCCCGCAGCT +
Preference number: 4 (lower is better)
Translates to: HAPWSTPLESEHILQPRSAATRR*HPSPAA
Trigger: AGCTGCGGGACTGGGATGGCAACGCCGAGTTGCTGC...AGATCGAGGCTGCAGGATATGCTCAGACTCTAGAGGCGTGGACCAAGGGGCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR GCA 90 bp GGCCAGCAAGGAGTGAAGCTCCATGCCCCTTGGTCCACGCCTCTAGAGTCTGAGAGGTGCACGGAGAACTaGAGCAACTCGGCGTTGCCA +
Preference number: 4 (lower is better)
Translates to: GQQGVKLHAPWSTPLESERCTEN*SNSALP
Trigger: TGGCAACGCCGAGTTGCTGCAGTTCTCCGTGCACCT...CTCAGACTCTAGAGGCGTGGACCAAGGGGCATGGAGCTTCACTCCTTGCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR GCA 90 bp CCTACACACAACAGCACCAGCACCATGAGGGCGCTCTCGACCCACACAAGCCCTAGGTGCACGGAGAACTaGAGCAACTCGGCGTTGCCA +
Preference number: 4 (lower is better)
Translates to: PTHNSTSTMRALSTHTSPRCTEN*SNSALP
Trigger: TGGCAACGCCGAGTTGCTGCAGTTCTCCGTGCACCT...AGGGCTTGTGTGGGTCGAGAGCGCCCTCATGGTGCTGGTGCTGTTGTGTGTAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
CDS-3UTR GCA 90 bp CCTGGCCAGCAAGGAGTGAAGCTCCATGCCCCTTGGTCCACGCCTCTAGAGTCTAGGTGCACGGAGAACTaGAGCAACTCGGCGTTGCCA +
Preference number: 4 (lower is better)
Translates to: PGQQGVKLHAPWSTPLESRCTEN*SNSALP
Trigger: TGGCAACGCCGAGTTGCTGCAGTTCTCCGTGCACCT...AGACTCTAGAGGCGTGGACCAAGGGGCATGGAGCTTCACTCCTTGCTGGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR GCA 90 bp CACCATGAGGGCGCTCTCGACCCACACAAGCCCTGGTCCCCGTCAGTCAATGTGTTAAGCTTCTGCCGCTaGTGTGGGATGGAGCGGAAG +
Preference number: 4 (lower is better)
Translates to: HHEGALDPHKPWSPSVNVLSFCR*CGMERK
Trigger: CTTCCGCTCCATCCCACAGCAGCGGCAGAAGCTTAA...CACATTGACTGACGGGGACCAGGGCTTGTGTGGGTCGAGAGCGCCCTCATGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR GCA 90 bp CTGAGTCCCCAACTCCCTGGCCAGCAAGGAGTGAAGCTCCATGCCCCTTGGTCCCCCTTCTTAAGCTTCTaGCGCTGCTGTGGGATGGAG +
Preference number: 4 (lower is better)
Translates to: LSPQLPGQQGVKLHAPWSPFLSF*RCCGME
Trigger: CTCCATCCCACAGCAGCGGCAGAAGCTTAAGAAGGG...GGACCAAGGGGCATGGAGCTTCACTCCTTGCTGGCCAGGGAGTTGGGGACTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR GCA 90 bp TGCTTGTGTCCCCAGGGGACCTACACACAACAGCACCAGCACCATGAGGGCGCTGGAGGCTGCCTCTGCTaGCATGGGCTGGATCAACAT +
Preference number: 4 (lower is better)
Translates to: CLCPQGTYTQQHQHHEGAGGCLC*HGLDQH
Trigger: ATGTTGATCCAGCCCATGGCAGCAGAGGCAGCCTCC...AGCGCCCTCATGGTGCTGGTGCTGTTGTGTGTAGGTCCCCTGGGGACACAAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
CDS-3UTR GCA 90 bp GCCCAGATACCATTGGCGCCTGCTTGTGTCCCCAGGGGACCTACACACAACAGCCTAGGAGGCTGCCTCTaGTGCCATGGGCTGGATCAA +
Preference number: 4 (lower is better)
Translates to: AQIPLAPACVPRGPTHNSLGGCL*CHGLDQ
Trigger: TTGATCCAGCCCATGGCAGCAGAGGCAGCCTCCTAG...GCTGTTGTGTGTAGGTCCCCTGGGGACACAAGCAGGCGCCAATGGTATCTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
CDS-3UTR GCA 90 bp GGCCAGCAAGGAGTGAAGCTCCATGCCCCTTGGTCCACGCCTCTAGAGTCTGAGCTAGGAGGCTGCCTCTaGTGCCATGGGCTGGATCAA +
Preference number: 4 (lower is better)
Translates to: GQQGVKLHAPWSTPLESELGGCL*CHGLDQ
Trigger: TTGATCCAGCCCATGGCAGCAGAGGCAGCCTCCTAG...CTCAGACTCTAGAGGCGTGGACCAAGGGGCATGGAGCTTCACTCCTTGCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR GCA 90 bp TACCATTGGCGCCTGCTTGTGTCCCCAGGGGACCTACACACAACAGCACCAGCAGATACCATTGGCGCCTaGTTGTGTCCCCAGGGGACC +
Preference number: 4 (lower is better)
Translates to: YHWRLLVSPGDLHTTAPADTIGA*LCPQGT
Trigger: GGTCCCCTGGGGACACAAGCAGGCGCCAATGGTATC...TGCTGGTGCTGTTGTGTGTAGGTCCCCTGGGGACACAAGCAGGCGCCAATGGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000594875.1
CDS-3UTR GCA 90 bp CCCAGATACCATTGGCGCCTGCTTGTGTCCCCAGGGGACCTACACACAACAGCAGATACCATTGGCGCCTaGTTGTGTCCCCAGGGGACC +
Preference number: 4 (lower is better)
Translates to: PRYHWRLLVSPGDLHTTADTIGA*LCPQGT
Trigger: GGTCCCCTGGGGACACAAGCAGGCGCCAATGGTATC...TGCTGTTGTGTGTAGGTCCCCTGGGGACACAAGCAGGCGCCAATGGTATCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000594875.1
CDS-3UTR CCA 90 bp GCAGAGCCAAGAGTCACCGTCTTTCGTGGGCCTGGGACCAGGCCCAGCCAGGACGGTTGCAGAAGCCGCTaGAAAGAATCGGATCACAGT +
Preference number: 4 (lower is better)
Translates to: AEPRVTVFRGPGTRPSQDGCRSR*KESDHS
Trigger: ACTGTGATCCGATTCTTTCCAGCGGCTTCTGCAACC...GTCCTGGCTGGGCCTGGTCCCAGGCCCACGAAAGACGGTGACTCTTGGCTCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR CCA 90 bp AGTCGTGGTCTTCTTCTCTGTCCACAAGTTTCCAGATGGCCCCTCCTTGGAGCCTCAGTAGCACGGCGGTaGCGGCGCAGAGCATCAGGG +
Preference number: 4 (lower is better)
Translates to: SRGLLLCPQVSRWPLLGASVARR*RRRASG
Trigger: CCCTGATGCTCTGCGCCGCCACCGCCGTGCTACTGA...GGCTCCAAGGAGGGGCCATCTGGAAACTTGTGGACAGAGAAGAAGACCACGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000595079.5
CDS-3UTR CCA 90 bp CCCTGCACTCAGAAAGGGGGCTTCTCCAGTCGTGGTCTTCTTCTCTGTCCACAACAAAGCGCGGCGACTTaGACTGCACGGGTCCGCCCT +
Preference number: 4 (lower is better)
Translates to: PCTQKGGFSSRGLLLCPQQSAAT*TARVRP
Trigger: AGGGCGGACCCGTGCAGTCCAAGTCGCCGCGCTTTG...TTGTGGACAGAGAAGAAGACCACGACTGGAGAAGCCCCCTTTCTGAGTGCAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000595079.5
CDS-3UTR CCA 90 bp AGCCATCGTGGCGCCTCTGAATTACTGTCCAGCCTCCATCTGAGGTCATCTTGCCAAAGCGCGGCGACTTaGACTGCACGGGTCCGCCCT +
Preference number: 4 (lower is better)
Translates to: SHRGASELLSSLHLRSSCQSAAT*TARVRP
Trigger: AGGGCGGACCCGTGCAGTCCAAGTCGCCGCGCTTTG...GCAAGATGACCTCAGATGGAGGCTGGACAGTAATTCAGAGGCGCCACGATGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595079.5
CDS-3UTR CCA 90 bp CACCATGAGGGCGCTCTCGACCCACACAAGCCCTGGTCCCCGTCAGTCAATGTGTGGTCTAGGTGCTTGTaGTCCAGGAGGCCAAACTGG +
Preference number: 4 (lower is better)
Translates to: HHEGALDPHKPWSPSVNVWSRCL*SRRPNW
Trigger: CCAGTTTGGCCTCCTGGACCACAAGCACCTAGACCA...CACATTGACTGACGGGGACCAGGGCTTGTGTGGGTCGAGAGCGCCCTCATGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR CCA 90 bp CAGGCAGGGAACGGCCACATCCTCGGGCAGAGCCAAGAGTCACCGTCTTTCGTGTGGTCTAGGTGCTTGTaGTCCAGGAGGCCAAACTGG +
Preference number: 4 (lower is better)
Translates to: QAGNGHILGQSQESPSFVWSRCL*SRRPNW
Trigger: CCAGTTTGGCCTCCTGGACCACAAGCACCTAGACCA...CACGAAAGACGGTGACTCTTGGCTCTGCCCGAGGATGTGGCCGTTCCCTGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000595079.5
CDS-3UTR CCA 90 bp CTCCAGTCGTGGTCTTCTTCTCTGTCCACAAGTTTCCAGATGGCCCCTCCTTGGAGCCAGAACTCGCCGTaGGGATCCCCAAACCCCGCC +
Preference number: 4 (lower is better)
Translates to: LQSWSSSLSTSFQMAPPWSQNSP*GSPNPA
Trigger: GGCGGGGTTTGGGGATCCCCACGGCGAGTTCTGGCT...CCAAGGAGGGGCCATCTGGAAACTTGTGGACAGAGAAGAAGACCACGACTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000595079.5
CDS-3UTR CCA 90 bp TGCTTGTGTCCCCAGGGGACCTACACACAACAGCACCAGCACCATGAGGGCGCTGATCCTGGTCCCAAGTaGAGAAGGGTACGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: CLCPQGTYTQQHQHHEGADPGPK*RRVRRG
Trigger: GCCTCTCCGTACCCTTCTCCACTTGGGACCAGGATC...AGCGCCCTCATGGTGCTGGTGCTGTTGTGTGTAGGTCCCCTGGGGACACAAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
CDS-3UTR CCA 90 bp CATTGGCGCCTGCTTGTGTCCCCAGGGGACCTACACACAACAGCACCAGCACCACTCCAGAGAGGCTCTTaGCGCAGTTCTTGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: HWRLLVSPGDLHTTAPAPLQRGS*RSSCPC
Trigger: GCAGGGACAAGAACTGCGCCAAGAGCCTCTCTGGAG...TGGTGCTGGTGCTGTTGTGTGTAGGTCCCCTGGGGACACAAGCAGGCGCCAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
CDS-3UTR CCA 90 bp TCTTCTCTGTCCACAAGTTTCCAGATGGCCCCTCCTTGGAGCCCCTGCCCAGGCCTCCAGAGAGGCTCTTaGCGCAGTTCTTGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: SSLSTSFQMAPPWSPCPGLQRGS*RSSCPC
Trigger: GCAGGGACAAGAACTGCGCCAAGAGCCTCTCTGGAG...GCCTGGGCAGGGGCTCCAAGGAGGGGCCATCTGGAAACTTGTGGACAGAGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000595079.5
CDS-3UTR CCA 90 bp CCGCCCAGATACCATTGGCGCCTGCTTGTGTCCCCAGGGGACCTACACACAACACTTCTGCCGCTGCTGTaGGATGGAGCGGAAGTACTG +
Preference number: 4 (lower is better)
Translates to: PPRYHWRLLVSPGDLHTTLLPLL*DGAEVL
Trigger: CAGTACTTCCGCTCCATCCCACAGCAGCGGCAGAAG...TGTTGTGTGTAGGTCCCCTGGGGACACAAGCAGGCGCCAATGGTATCTGGGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
CDS-3UTR CCA 90 bp GGCCAGCAAGGAGTGAAGCTCCATGCCCCTTGGTCCACGCCTCTAGAGTCTGAGCCACAAGTTTCCAGATaGCCCCTCCTTGGAGCCCCT +
Preference number: 4 (lower is better)
Translates to: GQQGVKLHAPWSTPLESEPQVSR*PLLGAP
Trigger: AGGGGCTCCAAGGAGGGGCCATCTGGAAACTTGTGG...CTCAGACTCTAGAGGCGTGGACCAAGGGGCATGGAGCTTCACTCCTTGCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000595079.5
CDS-3UTR CCA 90 bp GCCTGCTTGTGTCCCCAGGGGACCTACACACAACAGCACCAGCACCATGAGGGCAAGCTCCATGCCCCTTaGTCCACGCCTCTAGAGTCT +
Preference number: 4 (lower is better)
Translates to: ACLCPQGTYTQQHQHHEGKLHAP*STPLES
Trigger: AGACTCTAGAGGCGTGGACCAAGGGGCATGGAGCTT...GCCCTCATGGTGCTGGTGCTGTTGTGTGTAGGTCCCCTGGGGACACAAGCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
CDS-3UTR CCA 90 bp TACACACAACAGCACCAGCACCATGAGGGCGCTCTCGACCCACACAAGCCCTGGGAGTCCCCAACTCCCTaGCCAGCAAGGAGTGAAGCT +
Preference number: 4 (lower is better)
Translates to: YTQQHQHHEGALDPHKPWESPTP*PARSEA
Trigger: AGCTTCACTCCTTGCTGGCCAGGGAGTTGGGGACTC...CCAGGGCTTGTGTGGGTCGAGAGCGCCCTCATGGTGCTGGTGCTGTTGTGTGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR TCA 90 bp AGATACCATTGGCGCCTGCTTGTGTCCCCAGGGGACCTACACACAACAGCACCATGTGTCTGCAGGCTGTaGAGGACCTCAGGGTCCACC +
Preference number: 4 (lower is better)
Translates to: RYHWRLLVSPGDLHTTAPCVCRL*RTSGST
Trigger: GGTGGACCCTGAGGTCCTTCACAGCCTGCAGACACA...TGGTGCTGTTGTGTGTAGGTCCCCTGGGGACACAAGCAGGCGCCAATGGTATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000594875.1
CDS-3UTR TCA 90 bp GAGGGCGCTCTCGACCCACACAAGCCCTGGTCCCCGTCAGTCAATGTGACTGAGTGGCTTTGCAGATGCTaGATTCGCAGGTGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: EGALDPHKPWSPSVNVTEWLCRC*IRRCCF
Trigger: GAAGCAGCACCTGCGAATTCAGCATCTGCAAAGCCA...CTCAGTCACATTGACTGACGGGGACCAGGGCTTGTGTGGGTCGAGAGCGCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR TCA 90 bp CAGCACCATGAGGGCGCTCTCGACCCACACAAGCCCTGGTCCCCGTCAGTCAATTGGCTTTGCAGATGCTaGATTCGCAGGTGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: QHHEGALDPHKPWSPSVNWLCRC*IRRCCF
Trigger: GAAGCAGCACCTGCGAATTCAGCATCTGCAAAGCCA...ATTGACTGACGGGGACCAGGGCTTGTGTGGGTCGAGAGCGCCCTCATGGTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR TCA 90 bp CACATCCTCGGGCAGAGCCAAGAGTCACCGTCTTTCGTGGGCCTGGGACCAGGCAATGGCGGAGACCCCTaGGGCTGGATTTCAAATAGT +
Preference number: 4 (lower is better)
Translates to: HILGQSQESPSFVGLGPGNGGDP*GWISNS
Trigger: ACTATTTGAAATCCAGCCTCAGGGGTCTCCGCCATT...GCCTGGTCCCAGGCCCACGAAAGACGGTGACTCTTGGCTCTGCCCGAGGATGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000593998.5
ENST00000595079.5
CDS-3UTR TCA 90 bp CTCGACCCACACAAGCCCTGGTCCCCGTCAGTCAATGTGACTGAGTCCGCCATTCCATCGTGGCGCCTCTaGATTACTGTCCAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: LDPHKPWSPSVNVTESAIPSWRL*ITVQPP
Trigger: TGGAGGCTGGACAGTAATTCAGAGGCGCCACGATGG...AATGGCGGACTCAGTCACATTGACTGACGGGGACCAGGGCTTGTGTGGGTCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR TCA 90 bp CGGCCCCGCCAGGTCTTCCAGAAGATTCCCTTCTTAAGCTTCTGCCGCTGCTGTTGTTGCGGTCCCCCGTaGTGCTATGCACCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: RPRQVFQKIPFLSFCRCCCCGPP*CYAPSP
Trigger: TGGAGAAGGTGCATAGCATCACGGGGGACCGCAACA...ACAGCAGCGGCAGAAGCTTAAGAAGGGAATCTTCTGGAAGACCTGGCGGGGCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595079.5
CDS-3UTR TCA 90 bp CAAGGAGTGAAGCTCCATGCCCCTTGGTCCACGCCTCTAGAGTCTGAGCATATCTCCCTGCGGAGGTCGTaGTCCTGGTCCCAAGTGGAG +
Preference number: 4 (lower is better)
Translates to: QGVKLHAPWSTPLESEHISLRRS*SWSQVE
Trigger: CTCCACTTGGGACCAGGATCACGACCTCCGCAGGGA...GATATGCTCAGACTCTAGAGGCGTGGACCAAGGGGCATGGAGCTTCACTCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR TCA 90 bp CTCCAGTCGTGGTCTTCTTCTCTGTCCACAAGTTTCCAGATGGCCCCTCCTTGGTCCCTGCGGAGGTCGTaGTCCTGGTCCCAAGTGGAG +
Preference number: 4 (lower is better)
Translates to: LQSWSSSLSTSFQMAPPWSLRRS*SWSQVE
Trigger: CTCCACTTGGGACCAGGATCACGACCTCCGCAGGGA...CCAAGGAGGGGCCATCTGGAAACTTGTGGACAGAGAAGAAGACCACGACTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000595079.5
CDS-3UTR TCA 90 bp GACCCACACAAGCCCTGGTCCCCGTCAGTCAATGTGACTGAGTCCGCCATTGAGGGAAGTACTGGCCGTTaGGGTTGGAATGGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: DPHKPWSPSVNVTESAIEGSTGR*GWNGCR
Trigger: CCTGCAGCCATTCCAACCTCAACGGCCAGTACTTCC...CTCAATGGCGGACTCAGTCACATTGACTGACGGGGACCAGGGCTTGTGTGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR TCA 90 bp CACAAGCCCTGGTCCCCGTCAGTCAATGTGACTGAGTCCGCCATTGAGGCCAGTCCCCGTCAGTCAATGTaGCTGAGTCCGCCATTGAGG +
Preference number: 4 (lower is better)
Translates to: HKPWSPSVNVTESAIEASPRQSM*LSPPLR
Trigger: CCTCAATGGCGGACTCAGTCACATTGACTGACGGGG...ACTGGCCTCAATGGCGGACTCAGTCACATTGACTGACGGGGACCAGGGCTTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR TCA 90 bp TACCATTGGCGCCTGCTTGTGTCCCCAGGGGACCTACACACAACAGCACCAGCACCCCGTCAGTCAATGTaGCTGAGTCCGCCATTGAGG +
Preference number: 4 (lower is better)
Translates to: YHWRLLVSPGDLHTTAPAPRQSM*LSPPLR
Trigger: CCTCAATGGCGGACTCAGTCACATTGACTGACGGGG...TGCTGGTGCTGTTGTGTGTAGGTCCCCTGGGGACACAAGCAGGCGCCAATGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000594875.1
CDS-3UTR GCA 90 bp CTCCATGCCCCTTGGTCCACGCCTCTAGAGTCTGAGCATATCCTGCAGCCTCGAAGCTGCAGGAGTCCGTaGGCCAGGACATTCATCTCG +
Preference number: 4 (lower is better)
Translates to: LHAPWSTPLESEHILQPRSCRSP*ARTFIS
Trigger: CGAGATGAATGTCCTGGCGCACGGACTCCTGCAGCT...TCGAGGCTGCAGGATATGCTCAGACTCTAGAGGCGTGGACCAAGGGGCATGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR GCA 90 bp TTTTATTCCAAGAACTCTGTGAGCTCCGCCCAGATACCATTGGCGCCTGCTTGTAGCCCCTGGCCGAGCTaGAGGAGTCCGTGCGCCAGG +
Preference number: 4 (lower is better)
Translates to: FYSKNSVSSAQIPLAPACSPWPS*RSPCAR
Trigger: CCTGGCGCACGGACTCCTGCAGCTCGGCCAGGGGCT...ACAAGCAGGCGCCAATGGTATCTGGGCGGAGCTCACAGAGTTCTTGGAATAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000593998.5
ENST00000594875.1
CDS-3UTR GCA 90 bp CACATCCTCGGGCAGAGCCAAGAGTCACCGTCTTTCGTGGGCCTGGGACCAGGCTCAAATAGTCCACTCTaGCTCTCCCCAACCTGGAAC +
Preference number: 4 (lower is better)
Translates to: HILGQSQESPSFVGLGPGSNSPL*LSPTWN
Trigger: GTTCCAGGTTGGGGAGAGGCAGAGTGGACTATTTGA...GCCTGGTCCCAGGCCCACGAAAGACGGTGACTCTTGGCTCTGCCCGAGGATGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000593998.5
ENST00000595079.5
CDS-3UTR GCA 90 bp AGCCATCGTGGCGCCTCTGAATTACTGTCCAGCCTCCATCTGAGGTCATCTTGCCTGGCCGGCCACGGGTaGAGTGAGCTGCAGGCTATA +
Preference number: 4 (lower is better)
Translates to: SHRGASELLSSLHLRSSCLAGHG*SELQAI
Trigger: TATAGCCTGCAGCTCACTGCACCCGTGGCCGGCCAG...GCAAGATGACCTCAGATGGAGGCTGGACAGTAATTCAGAGGCGCCACGATGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595079.5
CDS-3UTR GCA 90 bp GACCCACACAAGCCCTGGTCCCCGTCAGTCAATGTGACTGAGTCCGCCATTGAGTGGAATGGCTGCAGGTaGCAAACCACCAGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: DPHKPWSPSVNVTESAIEWNGCR*QTTSLQ
Trigger: CTGGAGGCTGGTGGTTTGGCACCTGCAGCCATTCCA...CTCAATGGCGGACTCAGTCACATTGACTGACGGGGACCAGGGCTTGTGTGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR GCA 90 bp CATTGGCGCCTGCTTGTGTCCCCAGGGGACCTACACACAACAGCACCAGCACCACCCTTCTTAAGCTTCTaGCGCTGCTGTGGGATGGAG +
Preference number: 4 (lower is better)
Translates to: HWRLLVSPGDLHTTAPAPPFLSF*RCCGME
Trigger: CTCCATCCCACAGCAGCGGCAGAAGCTTAAGAAGGG...TGGTGCTGGTGCTGTTGTGTGTAGGTCCCCTGGGGACACAAGCAGGCGCCAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
CDS-3UTR CCA 90 bp CAACTCCCTGGCCAGCAAGGAGTGAAGCTCCATGCCCCTTGGTCCACGCCTCTATGGTCTAGGTGCTTGTaGTCCAGGAGGCCAAACTGG +
Preference number: 4 (lower is better)
Translates to: QLPGQQGVKLHAPWSTPLWSRCL*SRRPNW
Trigger: CCAGTTTGGCCTCCTGGACCACAAGCACCTAGACCA...TAGAGGCGTGGACCAAGGGGCATGGAGCTTCACTCCTTGCTGGCCAGGGAGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR CCA 90 bp GTCTTCTTCTCTGTCCACAAGTTTCCAGATGGCCCCTCCTTGGAGCCCCTGCCCGGCTTGGCCACCTCATaGTCTAGGTGCTTGTGGTCC +
Preference number: 4 (lower is better)
Translates to: VFFSVHKFPDGPSLEPLPGLATS*SRCLWS
Trigger: GGACCACAAGCACCTAGACCATGAGGTGGCCAAGCC...GGGCAGGGGCTCCAAGGAGGGGCCATCTGGAAACTTGTGGACAGAGAAGAAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000595079.5
CDS-3UTR CCA 90 bp CATTGGCGCCTGCTTGTGTCCCCAGGGGACCTACACACAACAGCACCAGCACCATTCTTCGGGCAGGCTTaGCCACCTCATGGTCTAGGT +
Preference number: 4 (lower is better)
Translates to: HWRLLVSPGDLHTTAPAPFFGQA*PPHGLG
Trigger: ACCTAGACCATGAGGTGGCCAAGCCTGCCCGAAGAA...TGGTGCTGGTGCTGTTGTGTGTAGGTCCCCTGGGGACACAAGCAGGCGCCAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
CDS-3UTR CCA 90 bp AGGTTGCTTTTATTCCAAGAACTCTGTGAGCTCCGCCCAGATACCATTGGCGCCGCCGGGTCAACTGGCTaGGCCATCTCGGGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: RLLLFQELCELRPDTIGAAGSTG*AISGSL
Trigger: GAGGCTGCCCGAGATGGCCCAGCCAGTTGACCCGGC...GGCGCCAATGGTATCTGGGCGGAGCTCACAGAGTTCTTGGAATAAAAGCAACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301455.7
ENST00000593998.5
CDS-3UTR CCA 90 bp CAAGGAGTGAAGCTCCATGCCCCTTGGTCCACGCCTCTAGAGTCTGAGCATATCACCTGGAACAGCTCCTaGCAATCCCTGGGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: QGVKLHAPWSTPLESEHITWNSS*QSLGSR
Trigger: CCGGCTGCCCAGGGATTGCCAGGAGCTGTTCCAGGT...GATATGCTCAGACTCTAGAGGCGTGGACCAAGGGGCATGGAGCTTCACTCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000593998.5
ENST00000595079.5
CDS-3UTR CCA 90 bp AGGGGACCTACACACAACAGCACCAGCACCATGAGGGCGCTCTCGACCCACACAGCAGTTCACCAAAAATaGCGGAGACCCCTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: RGPTHNSTSTMRALSTHTAVHQK*RRPLRL
Trigger: CAGCCTCAGGGGTCTCCGCCATTTTTGGTGAACTGC...TGTGTGGGTCGAGAGCGCCCTCATGGTGCTGGTGCTGTTGTGTGTAGGTCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301455.7
ENST00000593998.5
CDS-3UTR CCA 90 bp CATTGGCGCCTGCTTGTGTCCCCAGGGGACCTACACACAACAGCACCAGCACCAGCAGTTCACCAAAAATaGCGGAGACCCCTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: HWRLLVSPGDLHTTAPAPAVHQK*RRPLRL
Trigger: CAGCCTCAGGGGTCTCCGCCATTTTTGGTGAACTGC...TGGTGCTGGTGCTGTTGTGTGTAGGTCCCCTGGGGACACAAGCAGGCGCCAATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000301455.7
ENST00000593998.5
CDS-3UTR CCA 90 bp TATTCCAAGAACTCTGTGAGCTCCGCCCAGATACCATTGGCGCCTGCTTGTGTCAGCCAGAACTCGCCGTaGGGATCCCCAAACCCCGCC +
Preference number: 4 (lower is better)
Translates to: YSKNSVSSAQIPLAPACVSQNSP*GSPNPA
Trigger: GGCGGGGTTTGGGGATCCCCACGGCGAGTTCTGGCT...GACACAAGCAGGCGCCAATGGTATCTGGGCGGAGCTCACAGAGTTCTTGGAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301455.7
ENST00000593998.5
CDS-3UTR CCA 90 bp CAAGAACTCTGTGAGCTCCGCCCAGATACCATTGGCGCCTGCTTGTGTCCCCAGGATCCTGGTCCCAAGTaGAGAAGGGTACGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: QELCELRPDTIGACLCPQDPGPK*RRVRRG
Trigger: GCCTCTCCGTACCCTTCTCCACTTGGGACCAGGATC...CTGGGGACACAAGCAGGCGCCAATGGTATCTGGGCGGAGCTCACAGAGTTCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301455.7
ENST00000593998.5
CDS-3UTR CCA 90 bp CACAAGCCCTGGTCCCCGTCAGTCAATGTGACTGAGTCCGCCATTGAGGCCAGTGATCCTGGTCCCAAGTaGAGAAGGGTACGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: HKPWSPSVNVTESAIEASDPGPK*RRVRRG
Trigger: GCCTCTCCGTACCCTTCTCCACTTGGGACCAGGATC...ACTGGCCTCAATGGCGGACTCAGTCACATTGACTGACGGGGACCAGGGCTTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR CCA 90 bp TCCAAGAACTCTGTGAGCTCCGCCCAGATACCATTGGCGCCTGCTTGTGTCCCCCTCCAGAGAGGCTCTTaGCGCAGTTCTTGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: SKNSVSSAQIPLAPACVPLQRGS*RSSCPC
Trigger: GCAGGGACAAGAACTGCGCCAAGAGCCTCTCTGGAG...GGGGACACAAGCAGGCGCCAATGGTATCTGGGCGGAGCTCACAGAGTTCTTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301455.7
ENST00000593998.5
CDS-3UTR CCA 90 bp CATTGGCGCCTGCTTGTGTCCCCAGGGGACCTACACACAACAGCACCAGCACCACCGTTGAGGTTGGAATaGCTGCAGGTGCCAAACCAC +
Preference number: 4 (lower is better)
Translates to: HWRLLVSPGDLHTTAPAPPLRLE*LQVPNH
Trigger: GTGGTTTGGCACCTGCAGCCATTCCAACCTCAACGG...TGGTGCTGGTGCTGTTGTGTGTAGGTCCCCTGGGGACACAAGCAGGCGCCAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
CDS-3UTR CCA 90 bp CTCCAGTCGTGGTCTTCTTCTCTGTCCACAAGTTTCCAGATGGCCCCTCCTTGGGCCGCTGCTGTGGGATaGAGCGGAAGTACTGGCCGT +
Preference number: 4 (lower is better)
Translates to: LQSWSSSLSTSFQMAPPWAAAVG*SGSTGR
Trigger: ACGGCCAGTACTTCCGCTCCATCCCACAGCAGCGGC...CCAAGGAGGGGCCATCTGGAAACTTGTGGACAGAGAAGAAGACCACGACTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000595079.5
CDS-3UTR CCA 90 bp GTCTTCTTCTCTGTCCACAAGTTTCCAGATGGCCCCTCCTTGGAGCCCCTGCCCCTTCTGCCGCTGCTGTaGGATGGAGCGGAAGTACTG +
Preference number: 4 (lower is better)
Translates to: VFFSVHKFPDGPSLEPLPLLPLL*DGAEVL
Trigger: CAGTACTTCCGCTCCATCCCACAGCAGCGGCAGAAG...GGGCAGGGGCTCCAAGGAGGGGCCATCTGGAAACTTGTGGACAGAGAAGAAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000595079.5
CDS-3UTR CCA 90 bp CACAAGCCCTGGTCCCCGTCAGTCAATGTGACTGAGTCCGCCATTGAGGCCAGTCTTCTGCCGCTGCTGTaGGATGGAGCGGAAGTACTG +
Preference number: 4 (lower is better)
Translates to: HKPWSPSVNVTESAIEASLLPLL*DGAEVL
Trigger: CAGTACTTCCGCTCCATCCCACAGCAGCGGCAGAAG...ACTGGCCTCAATGGCGGACTCAGTCACATTGACTGACGGGGACCAGGGCTTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR CCA 90 bp CCCAGATACCATTGGCGCCTGCTTGTGTCCCCAGGGGACCTACACACAACAGCACTGCCTCTGCTGCCATaGGCTGGATCAACATGGTGG +
Preference number: 4 (lower is better)
Translates to: PRYHWRLLVSPGDLHTTALPLLP*AGSTWW
Trigger: CCACCATGTTGATCCAGCCCATGGCAGCAGAGGCAG...TGCTGTTGTGTGTAGGTCCCCTGGGGACACAAGCAGGCGCCAATGGTATCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
CDS-3UTR CCA 90 bp CAGATACCATTGGCGCCTGCTTGTGTCCCCAGGGGACCTACACACAACAGCACCCCACAAGTTTCCAGATaGCCCCTCCTTGGAGCCCCT +
Preference number: 4 (lower is better)
Translates to: QIPLAPACVPRGPTHNSTPQVSR*PLLGAP
Trigger: AGGGGCTCCAAGGAGGGGCCATCTGGAAACTTGTGG...GGTGCTGTTGTGTGTAGGTCCCCTGGGGACACAAGCAGGCGCCAATGGTATCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000301455.7
ENST00000393962.6
CDS-3UTR CCA 90 bp ACACAACAGCACCAGCACCATGAGGGCGCTCTCGACCCACACAAGCCCTGGTCCGGGCTTCTCCAGTCGTaGTCTTCTTCTCTGTCCACA +
Preference number: 4 (lower is better)
Translates to: TQQHQHHEGALDPHKPWSGLLQS*SSSLST
Trigger: TGTGGACAGAGAAGAAGACCACGACTGGAGAAGCCC...GGACCAGGGCTTGTGTGGGTCGAGAGCGCCCTCATGGTGCTGGTGCTGTTGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000595079.5
CDS-3UTR CCA 90 bp TACACACAACAGCACCAGCACCATGAGGGCGCTCTCGACCCACACAAGCCCTGGAAGCTCCATGCCCCTTaGTCCACGCCTCTAGAGTCT +
Preference number: 4 (lower is better)
Translates to: YTQQHQHHEGALDPHKPWKLHAP*STPLES
Trigger: AGACTCTAGAGGCGTGGACCAAGGGGCATGGAGCTT...CCAGGGCTTGTGTGGGTCGAGAGCGCCCTCATGGTGCTGGTGCTGTTGTGTGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR CCA 90 bp CCCTGCACTCAGAAAGGGGGCTTCTCCAGTCGTGGTCTTCTTCTCTGTCCACAACCATTGAGGCCAGTCTaGCTGGCCCCAAGTGGTCCC +
Preference number: 4 (lower is better)
Translates to: PCTQKGGFSSRGLLLCPQPLRPV*LAPSGP
Trigger: GGGACCACTTGGGGCCAGCCAGACTGGCCTCAATGG...TTGTGGACAGAGAAGAAGACCACGACTGGAGAAGCCCCCTTTCTGAGTGCAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000595079.5
CDS-3UTR CCA 90 bp GCCCCTTGGTCCACGCCTCTAGAGTCTGAGCATATCCTGCAGCCTCGATCTCAGACTGTCCAGCCTCCATaGTGCAGGCGGCTGACATTG +
Preference number: 4 (lower is better)
Translates to: APWSTPLESEHILQPRSQTVQPP*CRRLTL
Trigger: CAATGTCAGCCGCCTGCACCATGGAGGCTGGACAGT...CTGAGATCGAGGCTGCAGGATATGCTCAGACTCTAGAGGCGTGGACCAAGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393962.6
CDS-3UTR TCA 90 bp TCCGCCCAGATACCATTGGCGCCTGCTTGTGTCCCCAGGGGACCTACACACAACTGGCTTTGCAGATGCTaGATTCGCAGGTGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: SAQIPLAPACVPRGPTHNWLCRC*IRRCCF
Trigger: GAAGCAGCACCTGCGAATTCAGCATCTGCAAAGCCA...GTTGTGTGTAGGTCCCCTGGGGACACAAGCAGGCGCCAATGGTATCTGGGCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000593998.5
ENST00000594875.1
CDS-3UTR TCA 90 bp AGTCGTGGTCTTCTTCTCTGTCCACAAGTTTCCAGATGGCCCCTCCTTGGAGCCCTTCCCAGGGCCGGTTaGAGTCCACTGAGCCATCGT +
Preference number: 4 (lower is better)
Translates to: SRGLLLCPQVSRWPLLGALPRAG*SPLSHR
Trigger: ACGATGGCTCAGTGGACTTCAACCGGCCCTGGGAAG...GGCTCCAAGGAGGGGCCATCTGGAAACTTGTGGACAGAGAAGAAGACCACGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000595079.5
CDS-3UTR TCA 90 bp AGATACCATTGGCGCCTGCTTGTGTCCCCAGGGGACCTACACACAACAGCACCATGTTGCGGTCCCCCGTaGTGCTATGCACCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: RYHWRLLVSPGDLHTTAPCCGPP*CYAPSP
Trigger: TGGAGAAGGTGCATAGCATCACGGGGGACCGCAACA...TGGTGCTGTTGTGTGTAGGTCCCCTGGGGACACAAGCAGGCGCCAATGGTATCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
CDS-3UTR TCA 90 bp CTAGAGTCTGAGCATATCCTGCAGCCTCGATCTCAGGAGGCAACGCATGCAGCCGGAAGTACTGGCCGTTaGGGTTGGAATGGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LESEHILQPRSQEATHAAGSTGR*GWNGCR
Trigger: CCTGCAGCCATTCCAACCTCAACGGCCAGTACTTCC...GGCTGCATGCGTTGCCTCCTGAGATCGAGGCTGCAGGATATGCTCAGACTCTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR TCA 90 bp CATGCCCCTTGGTCCACGCCTCTAGAGTCTGAGCATATCCTGCAGCCTCGATCTGGAAGTACTGGCCGTTaGGGTTGGAATGGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: HAPWSTPLESEHILQPRSGSTGR*GWNGCR
Trigger: CCTGCAGCCATTCCAACCTCAACGGCCAGTACTTCC...AGATCGAGGCTGCAGGATATGCTCAGACTCTAGAGGCGTGGACCAAGGGGCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR TCA 90 bp TGTGTCCCCAGGGGACCTACACACAACAGCACCAGCACCATGAGGGCGCTCTCGATTCCAAGAACTCTGTaGGCTCCGCCCAGATACCAT +
Preference number: 4 (lower is better)
Translates to: CVPRGPTHNSTSTMRALSIPRTL*APPRYH
Trigger: ATGGTATCTGGGCGGAGCTCACAGAGTTCTTGGAAT...CGAGAGCGCCCTCATGGTGCTGGTGCTGTTGTGTGTAGGTCCCCTGGGGACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000593998.5
ENST00000594875.1
CDS-3UTR TCA 90 bp GCTCCGCCCAGATACCATTGGCGCCTGCTTGTGTCCCCAGGGGACCTACACACAATTCCAAGAACTCTGTaGGCTCCGCCCAGATACCAT +
Preference number: 4 (lower is better)
Translates to: APPRYHWRLLVSPGDLHTIPRTL*APPRYH
Trigger: ATGGTATCTGGGCGGAGCTCACAGAGTTCTTGGAAT...TGTGTGTAGGTCCCCTGGGGACACAAGCAGGCGCCAATGGTATCTGGGCGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000593998.5
ENST00000594875.1
CDS-3UTR GCA 90 bp TGCTTTTATTCCAAGAACTCTGTGAGCTCCGCCCAGATACCATTGGCGCCTGCTTCAGCTGACTGCGGGTaGGCTCCGCGTGTTCGCGCA +
Preference number: 4 (lower is better)
Translates to: CFYSKNSVSSAQIPLAPASADCG*APRVRA
Trigger: TGCGCGAACACGCGGAGCGCACCCGCAGTCAGCTGA...AGCAGGCGCCAATGGTATCTGGGCGGAGCTCACAGAGTTCTTGGAATAAAAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000593998.5
ENST00000594875.1
CDS-3UTR GCA 90 bp GGTTGCTTTTATTCCAAGAACTCTGTGAGCTCCGCCCAGATACCATTGGCGCCTTGCTGCTTCTCCAGGTaGCGCTGCTGCTGGGCCACC +
Preference number: 4 (lower is better)
Translates to: GCFYSKNSVSSAQIPLAPCCFSR*RCCWAT
Trigger: GGTGGCCCAGCAGCAGCGGCACCTGGAGAAGCAGCA...AGGCGCCAATGGTATCTGGGCGGAGCTCACAGAGTTCTTGGAATAAAAGCAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000593998.5
ENST00000594875.1
CDS-3UTR GCA 90 bp TCCAAGAACTCTGTGAGCTCCGCCCAGATACCATTGGCGCCTGCTTGTGTCCCCACCTCATGGTCTAGGTaGTTGTGGTCCAGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: SKNSVSSAQIPLAPACVPTSWSR*LWSRRP
Trigger: TGGCCTCCTGGACCACAAGCACCTAGACCATGAGGT...GGGGACACAAGCAGGCGCCAATGGTATCTGGGCGGAGCTCACAGAGTTCTTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301455.7
ENST00000593998.5
CDS-3UTR GCA 90 bp GACCCACACAAGCCCTGGTCCCCGTCAGTCAATGTGACTGAGTCCGCCATTGAGACCTCATGGTCTAGGTaGTTGTGGTCCAGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: DPHKPWSPSVNVTESAIETSWSR*LWSRRP
Trigger: TGGCCTCCTGGACCACAAGCACCTAGACCATGAGGT...CTCAATGGCGGACTCAGTCACATTGACTGACGGGGACCAGGGCTTGTGTGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR GCA 90 bp ATTGTGAGCCGGGTCAACTGGCTGGGCCATCTCGGGCAGCCTCTTTCTTCGGGCTCAAATAGTCCACTCTaGCTCTCCCCAACCTGGAAC +
Preference number: 4 (lower is better)
Translates to: IVSRVNWLGHLGQPLSSGSNSPL*LSPTWN
Trigger: GTTCCAGGTTGGGGAGAGGCAGAGTGGACTATTTGA...GCCCGAAGAAAGAGGCTGCCCGAGATGGCCCAGCCAGTTGACCCGGCTCACAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595079.5
CDS-3UTR GCA 90 bp GCAGAGCCAAGAGTCACCGTCTTTCGTGGGCCTGGGACCAGGCCCAGCCAGGACCATCTGAGGTCATCTTaGAGTTCACCAAAAATGGCG +
Preference number: 4 (lower is better)
Translates to: AEPRVTVFRGPGTRPSQDHLRSS*SSPKMA
Trigger: CGCCATTTTTGGTGAACTGCAAGATGACCTCAGATG...GTCCTGGCTGGGCCTGGTCCCAGGCCCACGAAAGACGGTGACTCTTGGCTCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000593998.5
ENST00000595079.5
CDS-3UTR GCA 90 bp AGTCGTGGTCTTCTTCTCTGTCCACAAGTTTCCAGATGGCCCCTCCTTGGAGCCTCCTCGCCACCCAGGTaGACGGAGAACTGCAGCAAC +
Preference number: 4 (lower is better)
Translates to: SRGLLLCPQVSRWPLLGASSPPR*TENCSN
Trigger: GTTGCTGCAGTTCTCCGTGCACCTGGGTGGCGAGGA...GGCTCCAAGGAGGGGCCATCTGGAAACTTGTGGACAGAGAAGAAGACCACGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000595079.5
CDS-3UTR GCA 90 bp CAAGGAGTGAAGCTCCATGCCCCTTGGTCCACGCCTCTAGAGTCTGAGCATATCTCCTCGCCACCCAGGTaGACGGAGAACTGCAGCAAC +
Preference number: 4 (lower is better)
Translates to: QGVKLHAPWSTPLESEHISSPPR*TENCSN
Trigger: GTTGCTGCAGTTCTCCGTGCACCTGGGTGGCGAGGA...GATATGCTCAGACTCTAGAGGCGTGGACCAAGGGGCATGGAGCTTCACTCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR GCA 90 bp CTAGAGTCTGAGCATATCCTGCAGCCTCGATCTCAGGAGGCAACGCATGCAGCCCGCAGTTCTTGTCCCTaGGGAGGTCGTGATCCTGGT +
Preference number: 4 (lower is better)
Translates to: LESEHILQPRSQEATHAARSSCP*GGRDPG
Trigger: ACCAGGATCACGACCTCCGCAGGGACAAGAACTGCG...GGCTGCATGCGTTGCCTCCTGAGATCGAGGCTGCAGGATATGCTCAGACTCTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR GCA 90 bp TGGTCCACGCCTCTAGAGTCTGAGCATATCCTGCAGCCTCGATCTCAGGAGGCACGCAGTTCTTGTCCCTaGGGAGGTCGTGATCCTGGT +
Preference number: 4 (lower is better)
Translates to: WSTPLESEHILQPRSQEARSSCP*GGRDPG
Trigger: ACCAGGATCACGACCTCCGCAGGGACAAGAACTGCG...TGCCTCCTGAGATCGAGGCTGCAGGATATGCTCAGACTCTAGAGGCGTGGACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR GCA 90 bp AGTTCTTGTCCCTGCGGAGGTCGTGATCCTGGTCCCAAGTGGAGAAGGGTACGGTTAAGCTTCTGCCGCTaGTGTGGGATGGAGCGGAAG +
Preference number: 4 (lower is better)
Translates to: SSCPCGGRDPGPKWRRVRLSFCR*CGMERK
Trigger: CTTCCGCTCCATCCCACAGCAGCGGCAGAAGCTTAA...CCGTACCCTTCTCCACTTGGGACCAGGATCACGACCTCCGCAGGGACAAGAACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595079.5
CDS-3UTR GCA 90 bp CAGATACCATTGGCGCCTGCTTGTGTCCCCAGGGGACCTACACACAACAGCACCCCCTTCTTAAGCTTCTaGCGCTGCTGTGGGATGGAG +
Preference number: 4 (lower is better)
Translates to: QIPLAPACVPRGPTHNSTPFLSF*RCCGME
Trigger: CTCCATCCCACAGCAGCGGCAGAAGCTTAAGAAGGG...GGTGCTGTTGTGTGTAGGTCCCCTGGGGACACAAGCAGGCGCCAATGGTATCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
CDS-3UTR GCA 90 bp TCTTCTCTGTCCACAAGTTTCCAGATGGCCCCTCCTTGGAGCCCCTGCCCAGGCAGTCTGAGCATATCCTaGAGCCTCGATCTCAGGAGG +
Preference number: 4 (lower is better)
Translates to: SSLSTSFQMAPPWSPCPGSLSIS*SLDLRR
Trigger: CCTCCTGAGATCGAGGCTGCAGGATATGCTCAGACT...GCCTGGGCAGGGGCTCCAAGGAGGGGCCATCTGGAAACTTGTGGACAGAGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000595079.5
CDS-3UTR CCA 90 bp AGGTTGCTTTTATTCCAAGAACTCTGTGAGCTCCGCCCAGATACCATTGGCGCCCAAAGCGCGGCGACTTaGACTGCACGGGTCCGCCCT +
Preference number: 4 (lower is better)
Translates to: RLLLFQELCELRPDTIGAQSAAT*TARVRP
Trigger: AGGGCGGACCCGTGCAGTCCAAGTCGCCGCGCTTTG...GGCGCCAATGGTATCTGGGCGGAGCTCACAGAGTTCTTGGAATAAAAGCAACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301455.7
ENST00000593998.5
CDS-3UTR CCA 90 bp TTTTATTCCAAGAACTCTGTGAGCTCCGCCCAGATACCATTGGCGCCTGCTTGTTGTTCGCGCAGCCCCTaGCCGAGCTGCAGGAGTCCG +
Preference number: 4 (lower is better)
Translates to: FYSKNSVSSAQIPLAPACCSRSP*PSCRSP
Trigger: CGGACTCCTGCAGCTCGGCCAGGGGCTGCGCGAACA...ACAAGCAGGCGCCAATGGTATCTGGGCGGAGCTCACAGAGTTCTTGGAATAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000593998.5
ENST00000594875.1
CDS-3UTR CCA 90 bp CTAGAGTCTGAGCATATCCTGCAGCCTCGATCTCAGGAGGCAACGCATGCAGCCGGCTTGGCCACCTCATaGTCTAGGTGCTTGTGGTCC +
Preference number: 4 (lower is better)
Translates to: LESEHILQPRSQEATHAAGLATS*SRCLWS
Trigger: GGACCACAAGCACCTAGACCATGAGGTGGCCAAGCC...GGCTGCATGCGTTGCCTCCTGAGATCGAGGCTGCAGGATATGCTCAGACTCTAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR CCA 90 bp CAGATACCATTGGCGCCTGCTTGTGTCCCCAGGGGACCTACACACAACAGCACCTTCTTCGGGCAGGCTTaGCCACCTCATGGTCTAGGT +
Preference number: 4 (lower is better)
Translates to: QIPLAPACVPRGPTHNSTFFGQA*PPHGLG
Trigger: ACCTAGACCATGAGGTGGCCAAGCCTGCCCGAAGAA...GGTGCTGTTGTGTGTAGGTCCCCTGGGGACACAAGCAGGCGCCAATGGTATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
CDS-3UTR CCA 90 bp CTCCATGCCCCTTGGTCCACGCCTCTAGAGTCTGAGCATATCCTGCAGCCTCGAGCAGTTCACCAAAAATaGCGGAGACCCCTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: LHAPWSTPLESEHILQPRAVHQK*RRPLRL
Trigger: CAGCCTCAGGGGTCTCCGCCATTTTTGGTGAACTGC...TCGAGGCTGCAGGATATGCTCAGACTCTAGAGGCGTGGACCAAGGGGCATGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000593998.5
ENST00000595079.5
CDS-3UTR CCA 90 bp CCCAGATACCATTGGCGCCTGCTTGTGTCCCCAGGGGACCTACACACAACAGCACCGTTGAGGTTGGAATaGCTGCAGGTGCCAAACCAC +
Preference number: 4 (lower is better)
Translates to: PRYHWRLLVSPGDLHTTAPLRLE*LQVPNH
Trigger: GTGGTTTGGCACCTGCAGCCATTCCAACCTCAACGG...TGCTGTTGTGTGTAGGTCCCCTGGGGACACAAGCAGGCGCCAATGGTATCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
CDS-3UTR CCA 90 bp CACAAGCCCTGGTCCCCGTCAGTCAATGTGACTGAGTCCGCCATTGAGGCCAGTCCGTTGAGGTTGGAATaGCTGCAGGTGCCAAACCAC +
Preference number: 4 (lower is better)
Translates to: HKPWSPSVNVTESAIEASPLRLE*LQVPNH
Trigger: GTGGTTTGGCACCTGCAGCCATTCCAACCTCAACGG...ACTGGCCTCAATGGCGGACTCAGTCACATTGACTGACGGGGACCAGGGCTTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR CCA 90 bp CCCTGCACTCAGAAAGGGGGCTTCTCCAGTCGTGGTCTTCTTCTCTGTCCACAATGGGCTGGATCAACATaGTGGTGGCCTGCAGCGGGT +
Preference number: 4 (lower is better)
Translates to: PCTQKGGFSSRGLLLCPQWAGST*WWPAAG
Trigger: ACCCGCTGCAGGCCACCACCATGTTGATCCAGCCCA...TTGTGGACAGAGAAGAAGACCACGACTGGAGAAGCCCCCTTTCTGAGTGCAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000595079.5
CDS-3UTR CCA 90 bp TGCTTTTATTCCAAGAACTCTGTGAGCTCCGCCCAGATACCATTGGCGCCTGCTCGTCTTTCGTGGGCCTaGGACCAGGCCCAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: CFYSKNSVSSAQIPLAPARLSWA*DQAQPG
Trigger: TCCTGGCTGGGCCTGGTCCCAGGCCCACGAAAGACG...AGCAGGCGCCAATGGTATCTGGGCGGAGCTCACAGAGTTCTTGGAATAAAAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301455.7
ENST00000593998.5
CDS-3UTR CCA 90 bp CGCCCAGATACCATTGGCGCCTGCTTGTGTCCCCAGGGGACCTACACACAACAGGGGCTTCTCCAGTCGTaGTCTTCTTCTCTGTCCACA +
Preference number: 4 (lower is better)
Translates to: RPDTIGACLCPQGTYTQQGLLQS*SSSLST
Trigger: TGTGGACAGAGAAGAAGACCACGACTGGAGAAGCCC...CTGTTGTGTGTAGGTCCCCTGGGGACACAAGCAGGCGCCAATGGTATCTGGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301455.7
ENST00000393962.6
CDS-3UTR CCA 90 bp TCTTCTCTGTCCACAAGTTTCCAGATGGCCCCTCCTTGGAGCCCCTGCCCAGGCGGGCTTCTCCAGTCGTaGTCTTCTTCTCTGTCCACA +
Preference number: 4 (lower is better)
Translates to: SSLSTSFQMAPPWSPCPGGLLQS*SSSLST
Trigger: TGTGGACAGAGAAGAAGACCACGACTGGAGAAGCCC...GCCTGGGCAGGGGCTCCAAGGAGGGGCCATCTGGAAACTTGTGGACAGAGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000595079.5
CDS-3UTR CCA 90 bp CACAAGCCCTGGTCCCCGTCAGTCAATGTGACTGAGTCCGCCATTGAGGCCAGTAAGCTCCATGCCCCTTaGTCCACGCCTCTAGAGTCT +
Preference number: 4 (lower is better)
Translates to: HKPWSPSVNVTESAIEASKLHAP*STPLES
Trigger: AGACTCTAGAGGCGTGGACCAAGGGGCATGGAGCTT...ACTGGCCTCAATGGCGGACTCAGTCACATTGACTGACGGGGACCAGGGCTTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR TCA 90 bp TATTCCAAGAACTCTGTGAGCTCCGCCCAGATACCATTGGCGCCTGCTTGTGTCTGTGTCTGCAGGCTGTaGAGGACCTCAGGGTCCACC +
Preference number: 4 (lower is better)
Translates to: YSKNSVSSAQIPLAPACVCVCRL*RTSGST
Trigger: GGTGGACCCTGAGGTCCTTCACAGCCTGCAGACACA...GACACAAGCAGGCGCCAATGGTATCTGGGCGGAGCTCACAGAGTTCTTGGAATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000593998.5
ENST00000594875.1
CDS-3UTR TCA 90 bp CCCAGATACCATTGGCGCCTGCTTGTGTCCCCAGGGGACCTACACACAACAGCATGGCTTTGCAGATGCTaGATTCGCAGGTGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: PRYHWRLLVSPGDLHTTAWLCRC*IRRCCF
Trigger: GAAGCAGCACCTGCGAATTCAGCATCTGCAAAGCCA...TGCTGTTGTGTGTAGGTCCCCTGGGGACACAAGCAGGCGCCAATGGTATCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000594875.1
CDS-3UTR TCA 90 bp GGTTGCTTTTATTCCAAGAACTCTGTGAGCTCCGCCCAGATACCATTGGCGCCTAGGCGGCTGACATTGTaGGCCGGGTCAACTGGCTGG +
Preference number: 4 (lower is better)
Translates to: GCFYSKNSVSSAQIPLAPRRLTL*AGSTGW
Trigger: CCAGCCAGTTGACCCGGCTCACAATGTCAGCCGCCT...AGGCGCCAATGGTATCTGGGCGGAGCTCACAGAGTTCTTGGAATAAAAGCAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301455.7
ENST00000593998.5
CDS-3UTR TCA 90 bp TCAGAAAGGGGGCTTCTCCAGTCGTGGTCTTCTTCTCTGTCCACAAGTTTCCAGACAGCACCAGCACCATaGGGGCGCTCTCGACCCACA +
Preference number: 4 (lower is better)
Translates to: SERGLLQSWSSSLSTSFQTAPAP*GRSRPT
Trigger: TGTGGGTCGAGAGCGCCCTCATGGTGCTGGTGCTGT...CTGGAAACTTGTGGACAGAGAAGAAGACCACGACTGGAGAAGCCCCCTTTCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000595079.5
CDS-3UTR GCA 90 bp CAAGGAGTGAAGCTCCATGCCCCTTGGTCCACGCCTCTAGAGTCTGAGCATATCAGCTGCAGGAGTCCGTaGGCCAGGACATTCATCTCG +
Preference number: 4 (lower is better)
Translates to: QGVKLHAPWSTPLESEHISCRSP*ARTFIS
Trigger: CGAGATGAATGTCCTGGCGCACGGACTCCTGCAGCT...GATATGCTCAGACTCTAGAGGCGTGGACCAAGGGGCATGGAGCTTCACTCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR GCA 90 bp CAAGGAGTGAAGCTCCATGCCCCTTGGTCCACGCCTCTAGAGTCTGAGCATATCTCCCCCGTGATGCTATaGACCTTCTCCAGACCCAGC +
Preference number: 4 (lower is better)
Translates to: QGVKLHAPWSTPLESEHISPVML*TFSRPS
Trigger: GCTGGGTCTGGAGAAGGTGCATAGCATCACGGGGGA...GATATGCTCAGACTCTAGAGGCGTGGACCAAGGGGCATGGAGCTTCACTCCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR GCA 90 bp CCCTGCACTCAGAAAGGGGGCTTCTCCAGTCGTGGTCTTCTTCTCTGTCCACAATGGAATGGCTGCAGGTaGCAAACCACCAGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: PCTQKGGFSSRGLLLCPQWNGCR*QTTSLQ
Trigger: CTGGAGGCTGGTGGTTTGGCACCTGCAGCCATTCCA...TTGTGGACAGAGAAGAAGACCACGACTGGAGAAGCCCCCTTTCTGAGTGCAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000595079.5
CDS-3UTR GCA 90 bp AGCCATCGTGGCGCCTCTGAATTACTGTCCAGCCTCCATCTGAGGTCATCTTGCCTAGGAGGCTGCCTCTaGTGCCATGGGCTGGATCAA +
Preference number: 4 (lower is better)
Translates to: SHRGASELLSSLHLRSSCLGGCL*CHGLDQ
Trigger: TTGATCCAGCCCATGGCAGCAGAGGCAGCCTCCTAG...GCAAGATGACCTCAGATGGAGGCTGGACAGTAATTCAGAGGCGCCACGATGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595079.5
CDS-3UTR CCA 90 bp CAACTCCCTGGCCAGCAAGGAGTGAAGCTCCATGCCCCTTGGTCCACGCCTCTAGGTTGCAGAAGCCGCTaGAAAGAATCGGATCACAGT +
Preference number: 4 (lower is better)
Translates to: QLPGQQGVKLHAPWSTPLGCRSR*KESDHS
Trigger: ACTGTGATCCGATTCTTTCCAGCGGCTTCTGCAACC...TAGAGGCGTGGACCAAGGGGCATGGAGCTTCACTCCTTGCTGGCCAGGGAGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR CCA 90 bp TTATTCCAAGAACTCTGTGAGCTCCGCCCAGATACCATTGGCGCCTGCTTGTGTCTAACGGGAGGTCGGTaGACCCCTCGGTTCCCTGAC +
Preference number: 4 (lower is better)
Translates to: LFQELCELRPDTIGACLCLTGGR*TPRFPD
Trigger: GTCAGGGAACCGAGGGGTCCACCGACCTCCCGTTAG...ACACAAGCAGGCGCCAATGGTATCTGGGCGGAGCTCACAGAGTTCTTGGAATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000593998.5
ENST00000594875.1
CDS-3UTR CCA 90 bp AGATACCATTGGCGCCTGCTTGTGTCCCCAGGGGACCTACACACAACAGCACCATGGTCTAGGTGCTTGTaGTCCAGGAGGCCAAACTGG +
Preference number: 4 (lower is better)
Translates to: RYHWRLLVSPGDLHTTAPWSRCL*SRRPNW
Trigger: CCAGTTTGGCCTCCTGGACCACAAGCACCTAGACCA...TGGTGCTGTTGTGTGTAGGTCCCCTGGGGACACAAGCAGGCGCCAATGGTATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
CDS-3UTR CCA 90 bp CAAGGAGTGAAGCTCCATGCCCCTTGGTCCACGCCTCTAGAGTCTGAGCATATCCTTCTGCCGCTGCTGTaGGATGGAGCGGAAGTACTG +
Preference number: 4 (lower is better)
Translates to: QGVKLHAPWSTPLESEHILLPLL*DGAEVL
Trigger: CAGTACTTCCGCTCCATCCCACAGCAGCGGCAGAAG...GATATGCTCAGACTCTAGAGGCGTGGACCAAGGGGCATGGAGCTTCACTCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR CCA 90 bp CCCTGCACTCAGAAAGGGGGCTTCTCCAGTCGTGGTCTTCTTCTCTGTCCACAAGGATCAACATGGTGGTaGCCTGCAGCGGGTAGTAGC +
Preference number: 4 (lower is better)
Translates to: PCTQKGGFSSRGLLLCPQGSTWW*PAAGSS
Trigger: GCTACTACCCGCTGCAGGCCACCACCATGTTGATCC...TTGTGGACAGAGAAGAAGACCACGACTGGAGAAGCCCCCTTTCTGAGTGCAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000595079.5
CDS-3UTR CCA 90 bp CCCTGCACTCAGAAAGGGGGCTTCTCCAGTCGTGGTCTTCTTCTCTGTCCACAACTGCCTCTGCTGCCATaGGCTGGATCAACATGGTGG +
Preference number: 4 (lower is better)
Translates to: PCTQKGGFSSRGLLLCPQLPLLP*AGSTWW
Trigger: CCACCATGTTGATCCAGCCCATGGCAGCAGAGGCAG...TTGTGGACAGAGAAGAAGACCACGACTGGAGAAGCCCCCTTTCTGAGTGCAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000595079.5
CDS-3UTR CCA 90 bp TCAGAAAGGGGGCTTCTCCAGTCGTGGTCTTCTTCTCTGTCCACAAGTTTCCAGAGTCACCGTCTTTCGTaGGCCTGGGACCAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: SERGLLQSWSSSLSTSFQSHRLS*AWDQAQ
Trigger: CTGGGCCTGGTCCCAGGCCCACGAAAGACGGTGACT...CTGGAAACTTGTGGACAGAGAAGAAGACCACGACTGGAGAAGCCCCCTTTCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000595079.5
3UTR CAA 72 bp TATTCCAAGAACTCTGTGAGCTCCGCCCAGATACCATaGGCGCCTGCTTGTGTCCCCAGGGGACCTACACAC +
Preference number: 4 (lower is better)
Translates to: YSKNSVSSAQIP*APACVPRGPTH
Trigger: GTGTGTAGGTCCCCTGGGGACACAAGCAGGCGCCAATGGTATCTGGGCGGAGCTCACAGAGTTCTTGGAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000593998.5
ENST00000594875.1
CDS-3UTR TCA 90 bp CCAGATACCATTGGCGCCTGCTTGTGTCCCCAGGGGACCTACACACAACAGCACATTCCAAGAACTCTGTaGGCTCCGCCCAGATACCAT +
Preference number: 4 (lower is better)
Translates to: PDTIGACLCPQGTYTQQHIPRTL*APPRYH
Trigger: ATGGTATCTGGGCGGAGCTCACAGAGTTCTTGGAAT...GTGCTGTTGTGTGTAGGTCCCCTGGGGACACAAGCAGGCGCCAATGGTATCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000593998.5
ENST00000594875.1
CDS-3UTR CCA 90 bp GTCTTCTTCTCTGTCCACAAGTTTCCAGATGGCCCCTCCTTGGAGCCCCTGCCCGGTTGCAGAAGCCGCTaGAAAGAATCGGATCACAGT +
Preference number: 4 (lower is better)
Translates to: VFFSVHKFPDGPSLEPLPGCRSR*KESDHS
Trigger: ACTGTGATCCGATTCTTTCCAGCGGCTTCTGCAACC...GGGCAGGGGCTCCAAGGAGGGGCCATCTGGAAACTTGTGGACAGAGAAGAAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000595079.5
CDS-3UTR CCA 90 bp TCTCCAGTCGTGGTCTTCTTCTCTGTCCACAAGTTTCCAGATGGCCCCTCCTTGGGCTTGGCCACCTCATaGTCTAGGTGCTTGTGGTCC +
Preference number: 4 (lower is better)
Translates to: SPVVVFFSVHKFPDGPSLGLATS*SRCLWS
Trigger: GGACCACAAGCACCTAGACCATGAGGTGGCCAAGCC...CAAGGAGGGGCCATCTGGAAACTTGTGGACAGAGAAGAAGACCACGACTGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000595079.5
CDS-3UTR CCA 90 bp CAAGGAGTGAAGCTCCATGCCCCTTGGTCCACGCCTCTAGAGTCTGAGCATATCTTCTTCGGGCAGGCTTaGCCACCTCATGGTCTAGGT +
Preference number: 4 (lower is better)
Translates to: QGVKLHAPWSTPLESEHIFFGQA*PPHGLG
Trigger: ACCTAGACCATGAGGTGGCCAAGCCTGCCCGAAGAA...GATATGCTCAGACTCTAGAGGCGTGGACCAAGGGGCATGGAGCTTCACTCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR TCA 90 bp TCAGAAAGGGGGCTTCTCCAGTCGTGGTCTTCTTCTCTGTCCACAAGTTTCCAGTGTTGCGGTCCCCCGTaGTGCTATGCACCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: SERGLLQSWSSSLSTSFQCCGPP*CYAPSP
Trigger: TGGAGAAGGTGCATAGCATCACGGGGGACCGCAACA...CTGGAAACTTGTGGACAGAGAAGAAGACCACGACTGGAGAAGCCCCCTTTCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000595079.5
CDS-3UTR GCA 90 bp ACTGTCCAGCCTCCATCTGAGGTCATCTTGCAGTTCACCAAAAATGGCGGAGACCGCAGTTCTTGTCCCTaGGGAGGTCGTGATCCTGGT +
Preference number: 4 (lower is better)
Translates to: TVQPPSEVILQFTKNGGDRSSCP*GGRDPG
Trigger: ACCAGGATCACGACCTCCGCAGGGACAAGAACTGCG...GTCTCCGCCATTTTTGGTGAACTGCAAGATGACCTCAGATGGAGGCTGGACAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000595079.5
CDS-3UTR GCA 90 bp TTATTCCAAGAACTCTGTGAGCTCCGCCCAGATACCATTGGCGCCTGCTTGTGTTGGAATGGCTGCAGGTaGCAAACCACCAGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: LFQELCELRPDTIGACLCWNGCR*QTTSLQ
Trigger: CTGGAGGCTGGTGGTTTGGCACCTGCAGCCATTCCA...ACACAAGCAGGCGCCAATGGTATCTGGGCGGAGCTCACAGAGTTCTTGGAATAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301455.7
ENST00000593998.5
CDS-3UTR CCA 90 bp CTGAGGTTGCTTTTATTCCAAGAACTCTGTGAGCTCCGCCCAGATACCATTGGCAGGTGCCGCTGCTGCTaGGCCACCTTGTGGAAGAGT +
Preference number: 4 (lower is better)
Translates to: LRLLLFQELCELRPDTIGRCRCC*ATLWKS
Trigger: ACTCTTCCACAAGGTGGCCCAGCAGCAGCGGCACCT...GCCAATGGTATCTGGGCGGAGCTCACAGAGTTCTTGGAATAAAAGCAACCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000593998.5
ENST00000594875.1
CDS-3UTR CCA 90 bp AGCCATCGTGGCGCCTCTGAATTACTGTCCAGCCTCCATCTGAGGTCATCTTGCATGGAGCGGAAGTACTaGCCGTTGAGGTTGGAATGG +
Preference number: 4 (lower is better)
Translates to: SHRGASELLSSLHLRSSCMERKY*PLRLEW
Trigger: CCATTCCAACCTCAACGGCCAGTACTTCCGCTCCAT...GCAAGATGACCTCAGATGGAGGCTGGACAGTAATTCAGAGGCGCCACGATGGCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595079.5
CDS-3UTR CCA 90 bp CTCAGAAAGGGGGCTTCTCCAGTCGTGGTCTTCTTCTCTGTCCACAAGTTTCCAGCTGGATCAACATGGTaGTGGCCTGCAGCGGGTAGT +
Preference number: 4 (lower is better)
Translates to: LRKGASPVVVFFSVHKFPAGSTW*WPAAGS
Trigger: ACTACCCGCTGCAGGCCACCACCATGTTGATCCAGC...TGGAAACTTGTGGACAGAGAAGAAGACCACGACTGGAGAAGCCCCCTTTCTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000595079.5
CDS-3UTR CCA 90 bp TCAGAAAGGGGGCTTCTCCAGTCGTGGTCTTCTTCTCTGTCCACAAGTTTCCAGCCACAAGTTTCCAGATaGCCCCTCCTTGGAGCCCCT +
Preference number: 4 (lower is better)
Translates to: SERGLLQSWSSSLSTSFQPQVSR*PLLGAP
Trigger: AGGGGCTCCAAGGAGGGGCCATCTGGAAACTTGTGG...CTGGAAACTTGTGGACAGAGAAGAAGACCACGACTGGAGAAGCCCCCTTTCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000595079.5
CDS-3UTR TCA 90 bp CTGAGGTTGCTTTTATTCCAAGAACTCTGTGAGCTCCGCCCAGATACCATTGGCGGAAGTACTGGCCGTTaGGGTTGGAATGGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LRLLLFQELCELRPDTIGGSTGR*GWNGCR
Trigger: CCTGCAGCCATTCCAACCTCAACGGCCAGTACTTCC...GCCAATGGTATCTGGGCGGAGCTCACAGAGTTCTTGGAATAAAAGCAACCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301455.7
ENST00000593998.5
CDS-3UTR GCA 90 bp TCAGAAAGGGGGCTTCTCCAGTCGTGGTCTTCTTCTCTGTCCACAAGTTTCCAGACCTCATGGTCTAGGTaGTTGTGGTCCAGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: SERGLLQSWSSSLSTSFQTSWSR*LWSRRP
Trigger: TGGCCTCCTGGACCACAAGCACCTAGACCATGAGGT...CTGGAAACTTGTGGACAGAGAAGAAGACCACGACTGGAGAAGCCCCCTTTCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000595079.5
CDS-3UTR GCA 90 bp CAAGGAGTGAAGCTCCATGCCCCTTGGTCCACGCCTCTAGAGTCTGAGCATATCTCAAATAGTCCACTCTaGCTCTCCCCAACCTGGAAC +
Preference number: 4 (lower is better)
Translates to: QGVKLHAPWSTPLESEHISNSPL*LSPTWN
Trigger: GTTCCAGGTTGGGGAGAGGCAGAGTGGACTATTTGA...GATATGCTCAGACTCTAGAGGCGTGGACCAAGGGGCATGGAGCTTCACTCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000593998.5
ENST00000595079.5
CDS-3UTR GCA 90 bp CAAGAACTCTGTGAGCTCCGCCCAGATACCATTGGCGCCTGCTTGTGTCCCCAGCATCTGAGGTCATCTTaGAGTTCACCAAAAATGGCG +
Preference number: 4 (lower is better)
Translates to: QELCELRPDTIGACLCPQHLRSS*SSPKMA
Trigger: CGCCATTTTTGGTGAACTGCAAGATGACCTCAGATG...CTGGGGACACAAGCAGGCGCCAATGGTATCTGGGCGGAGCTCACAGAGTTCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301455.7
ENST00000593998.5
CDS-3UTR GCA 90 bp AGGTTGCTTTTATTCCAAGAACTCTGTGAGCTCCGCCCAGATACCATTGGCGCCTTAAGCTTCTGCCGCTaGTGTGGGATGGAGCGGAAG +
Preference number: 4 (lower is better)
Translates to: RLLLFQELCELRPDTIGALSFCR*CGMERK
Trigger: CTTCCGCTCCATCCCACAGCAGCGGCAGAAGCTTAA...GGCGCCAATGGTATCTGGGCGGAGCTCACAGAGTTCTTGGAATAAAAGCAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301455.7
ENST00000593998.5
CDS-3UTR GCA 90 bp TGCTTTTATTCCAAGAACTCTGTGAGCTCCGCCCAGATACCATTGGCGCCTGCTTTAAGCTTCTGCCGCTaGTGTGGGATGGAGCGGAAG +
Preference number: 4 (lower is better)
Translates to: CFYSKNSVSSAQIPLAPALSFCR*CGMERK
Trigger: CTTCCGCTCCATCCCACAGCAGCGGCAGAAGCTTAA...AGCAGGCGCCAATGGTATCTGGGCGGAGCTCACAGAGTTCTTGGAATAAAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301455.7
ENST00000593998.5
CDS-3UTR CCA 90 bp CAAGGAGTGAAGCTCCATGCCCCTTGGTCCACGCCTCTAGAGTCTGAGCATATCGGTTGCAGAAGCCGCTaGAAAGAATCGGATCACAGT +
Preference number: 4 (lower is better)
Translates to: QGVKLHAPWSTPLESEHIGCRSR*KESDHS
Trigger: ACTGTGATCCGATTCTTTCCAGCGGCTTCTGCAACC...GATATGCTCAGACTCTAGAGGCGTGGACCAAGGGGCATGGAGCTTCACTCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR TCA 90 bp CTCAGAAAGGGGGCTTCTCCAGTCGTGGTCTTCTTCTCTGTCCACAAGTTTCCAAATGGCGGAGACCCCTaGGGCTGGATTTCAAATAGT +
Preference number: 4 (lower is better)
Translates to: LRKGASPVVVFFSVHKFPNGGDP*GWISNS
Trigger: ACTATTTGAAATCCAGCCTCAGGGGTCTCCGCCATT...TGGAAACTTGTGGACAGAGAAGAAGACCACGACTGGAGAAGCCCCCTTTCTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301455.7
ENST00000595079.5
CDS-3UTR CCA 90 bp CTGAGGTTGCTTTTATTCCAAGAACTCTGTGAGCTCCGCCCAGATACCATTGGCATGGAGCGGAAGTACTaGCCGTTGAGGTTGGAATGG +
Preference number: 4 (lower is better)
Translates to: LRLLLFQELCELRPDTIGMERKY*PLRLEW
Trigger: CCATTCCAACCTCAACGGCCAGTACTTCCGCTCCAT...GCCAATGGTATCTGGGCGGAGCTCACAGAGTTCTTGGAATAAAAGCAACCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301455.7
ENST00000593998.5
CDS-3UTR GCA 90 bp TCTCCAGTCGTGGTCTTCTTCTCTGTCCACAAGTTTCCAGATGGCCCCTCCTTGCATCTGAGGTCATCTTaGAGTTCACCAAAAATGGCG +
Preference number: 4 (lower is better)
Translates to: SPVVVFFSVHKFPDGPSLHLRSS*SSPKMA
Trigger: CGCCATTTTTGGTGAACTGCAAGATGACCTCAGATG...CAAGGAGGGGCCATCTGGAAACTTGTGGACAGAGAAGAAGACCACGACTGGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301455.7
ENST00000595079.5
CDS-3UTR CCA 90 bp GTTCTGAGGTTGCTTTTATTCCAAGAACTCTGTGAGCTCCGCCCAGATACCATTATGGAGCGGAAGTACTaGCCGTTGAGGTTGGAATGG +
Preference number: 4 (lower is better)
Translates to: VLRLLLFQELCELRPDTIMERKY*PLRLEW
Trigger: CCATTCCAACCTCAACGGCCAGTACTTCCGCTCCAT...AATGGTATCTGGGCGGAGCTCACAGAGTTCTTGGAATAAAAGCAACCTCAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301455.7
ENST00000593998.5
CDS TCA 90 bp CAGGCGGACCCGCACGCGCTCAGGCGCCGCTCCAGCGCGCTCAGCTaGCTGCGGGTGCGCTCCGCGTGTTCGCGCAGCCCCTGGCCGAGC +
Preference number: 5 (lower is better)
Translates to: QADPHALRRRSSALS*LRVRSACSRSPWPS
Trigger: GCTCGGCCAGGGGCTGCGCGAACACGCGGAGCGCACCCGCAGTCAGCTGAGCGCGCTGGAGCGGCGCCTGAGCGCGTGCGGGTCCGCCTG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000594348.1
ENST00000594875.1
ENST00000598255.5
ENST00000599192.5
ENST00000601770.1
ENST00000601886.1
CDS TCA 90 bp GTGAAGGACCCGCACGCGCTCAGGCGCCGCTCCAGCGCGCTCAGCTaGCTGCGGGTGCGCTCCGCGTGTTCGCGCAGCCCCTGGCCGAGC +
Preference number: 5 (lower is better)
Translates to: VKDPHALRRRSSALS*LRVRSACSRSPWPS
Trigger: GCTCGGCCAGGGGCTGCGCGAACACGCGGAGCGCACCCGCAGTCAGCTGAGCGCGCTGGAGCGGCGCCTGAGCGCGTGCGGGTCCTTCAC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595079.5
CDS TCA 90 bp CGGCTCTCAGGGGCTAACGGGAGGTCGGTGGACCCCTCGGTTCCCTaGCAGGCGGACCCGCACGCGCTCAGGCGCCGCTCCAGCGCGCTC +
Preference number: 5 (lower is better)
Translates to: RLSGANGRSVDPSVP*QADPHALRRRSSAL
Trigger: GAGCGCGCTGGAGCGGCGCCTGAGCGCGTGCGGGTCCGCCTGTCAGGGAACCGAGGGGTCCACCGACCTCCCGTTAGCCCCTGAGAGCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000594348.1
ENST00000594875.1
ENST00000598255.5
ENST00000599192.5
ENST00000601886.1
CDS CCA 90 bp ACTTGGACTGCACGGGTCCGCCCTGAGCGCTCAGTAGCACGGCGGTaGCGGCGCAGAGCATCAGGGCTGCCCCGGCCGTCGGAGCACCGC +
Preference number: 5 (lower is better)
Translates to: TWTARVRPERSVARR*RRRASGLPRPSEHR
Trigger: GCGGTGCTCCGACGGCCGGGGCAGCCCTGATGCTCTGCGCCGCCACCGCCGTGCTACTGAGCGCTCAGGGCGGACCCGTGCAGTCCAAGT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000594348.1
ENST00000595079.5
ENST00000598255.5
ENST00000599192.5
ENST00000601770.1
ENST00000601886.1
CDS CCA 90 bp GGACCTCAGGGTCCACCCGGCTCTCAGGGGCTAACGGGAGGTCGGTaGACCCCTCGGTTCCCTGACAGGCGGACCCGCACGCGCTCAGGC +
Preference number: 5 (lower is better)
Translates to: GPQGPPGSQGLTGGR*TPRFPDRRTRTRSG
Trigger: GCCTGAGCGCGTGCGGGTCCGCCTGTCAGGGAACCGAGGGGTCCACCGACCTCCCGTTAGCCCCTGAGAGCCGGGTGGACCCTGAGGTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000594348.1
ENST00000594875.1
ENST00000598255.5
ENST00000599192.5
CDS TCA 90 bp TCCCAGGACGCAAAGCGCGGCGACTTGGACTGCACGGGTCCGCCCTaGGCGCTCAGTAGCACGGCGGTGGCGGCGCAGAGCATCAGGGCT +
Preference number: 5 (lower is better)
Translates to: SQDAKRGDLDCTGPP*ALSSTAVAAQSIRA
Trigger: AGCCCTGATGCTCTGCGCCGCCACCGCCGTGCTACTGAGCGCTCAGGGCGGACCCGTGCAGTCCAAGTCGCCGCGCTTTGCGTCCTGGGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000594348.1
ENST00000595079.5
ENST00000598255.5
ENST00000599192.5
ENST00000601770.1
ENST00000601886.1
CDS CCA 90 bp GCGCCAGGACATTCATCTCGTCCCAGGACGCAAAGCGCGGCGACTTaGACTGCACGGGTCCGCCCTGAGCGCTCAGTAGCACGGCGGTGG +
Preference number: 5 (lower is better)
Translates to: APGHSSRPRTQSAAT*TARVRPERSVARRW
Trigger: CCACCGCCGTGCTACTGAGCGCTCAGGGCGGACCCGTGCAGTCCAAGTCGCCGCGCTTTGCGTCCTGGGACGAGATGAATGTCCTGGCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000594348.1
ENST00000595079.5
ENST00000598255.5
ENST00000599192.5
ENST00000601770.1
ENST00000601886.1
CDS-3UTR CAA 90 bp TTGCCATCCCAGTCCCGCAGCTGCACGGCCAGGCGGCTGTTGCGGTCCCCCGTGGAAGCTCCATGCCCCTaGGTCCACGCCTCTAGAGTC +
Preference number: 5 (lower is better)
Translates to: LPSQSRSCTARRLLRSPVEAPCP*VHASRV
Trigger: GACTCTAGAGGCGTGGACCAAGGGGCATGGAGCTTC...CACGGGGGACCGCAACAGCCGCCTGGCCGTGCAGCTGCGGGACTGGGATGGCAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595079.5
CDS-3UTR CAA 90 bp CACCATGAGGGCGCTCTCGACCCACACAAGCCCTGGTCCCCGTCAGTCAATGTGGCAAAGCGCGGCGACTaGGACTGCACGGGTCCGCCC +
Preference number: 5 (lower is better)
Translates to: HHEGALDPHKPWSPSVNVAKRGD*DCTGPP
Trigger: GGGCGGACCCGTGCAGTCCAAGTCGCCGCGCTTTGC...CACATTGACTGACGGGGACCAGGGCTTGTGTGGGTCGAGAGCGCCCTCATGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR CAA 90 bp CAGGCAGGGAACGGCCACATCCTCGGGCAGAGCCAAGAGTCACCGTCTTTCGTGGCAAAGCGCGGCGACTaGGACTGCACGGGTCCGCCC +
Preference number: 5 (lower is better)
Translates to: QAGNGHILGQSQESPSFVAKRGD*DCTGPP
Trigger: GGGCGGACCCGTGCAGTCCAAGTCGCCGCGCTTTGC...CACGAAAGACGGTGACTCTTGGCTCTGCCCGAGGATGTGGCCGTTCCCTGCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000595079.5
CDS CCA 90 bp CCAGCCTCCATGGTGCAGGCGGCTGACATTGTGAGCCGGGTCAACTaGCTGGGCCATCTCGGGCAGCCTCTTTCTTCGGGCAGGCTTGGC +
Preference number: 5 (lower is better)
Translates to: PASMVQAADIVSRVN*LGHLGQPLSSGRLG
Trigger: GCCAAGCCTGCCCGAAGAAAGAGGCTGCCCGAGATGGCCCAGCCAGTTGACCCGGCTCACAATGTCAGCCGCCTGCACCATGGAGGCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393962.6
ENST00000598255.5
CDS-3UTR CAA 90 bp TACACACAACAGCACCAGCACCATGAGGGCGCTCTCGACCCACACAAGCCCTGGGCAAAGCGCGGCGACTaGGACTGCACGGGTCCGCCC +
Preference number: 5 (lower is better)
Translates to: YTQQHQHHEGALDPHKPWAKRGD*DCTGPP
Trigger: GGGCGGACCCGTGCAGTCCAAGTCGCCGCGCTTTGC...CCAGGGCTTGTGTGGGTCGAGAGCGCCCTCATGGTGCTGGTGCTGTTGTGTGTA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR CAA 90 bp GAGCTGCAGGCTATAGGCCGTGTCCTCGCCACCCAGGTGCACGGAGAACTGCAGTGCAGCAACTCGGCGTaGCCATCCCAGTCCCGCAGC +
Preference number: 5 (lower is better)
Translates to: ELQAIGRVLATQVHGELQCSNSA*PSQSRS
Trigger: GCTGCGGGACTGGGATGGCAACGCCGAGTTGCTGCA...CTGCAGTTCTCCGTGCACCTGGGTGGCGAGGACACGGCCTATAGCCTGCAGCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595079.5
CDS TCA 90 bp CCCGCTTGGTTGCAGAAGCCGCCAGTGGCGGAGAGGGCGCACGCTTaGGGTCAAGACTTCCAGACCAGCCCGGCCAACATCGTGAAACCC +
Preference number: 5 (lower is better)
Translates to: PAWLQKPPVAERAHA*GQDFQTSPANIVKP
Trigger: GGGTTTCACGATGTTGGCCGGGCTGGTCTGGAAGTCTTGACCTCAAGCGTGCGCCCTCTCCGCCACTGGCGGCTTCTGCAACCAAGCGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000599192.5
ENST00000601770.1
ENST00000601886.1
CDS-3UTR CAA 90 bp GGCCAGCAAGGAGTGAAGCTCCATGCCCCTTGGTCCACGCCTCTAGAGTCTGAGACGGCCAGGCGGCTGTaGCGGTCCCCCGTGATGCTA +
Preference number: 5 (lower is better)
Translates to: GQQGVKLHAPWSTPLESETARRL*RSPVML
Trigger: TAGCATCACGGGGGACCGCAACAGCCGCCTGGCCGT...CTCAGACTCTAGAGGCGTGGACCAAGGGGCATGGAGCTTCACTCCTTGCTGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR CAA 90 bp TGCTTGTGTCCCCAGGGGACCTACACACAACAGCACCAGCACCATGAGGGCGCTACGGCCAGGCGGCTGTaGCGGTCCCCCGTGATGCTA +
Preference number: 5 (lower is better)
Translates to: CLCPQGTYTQQHQHHEGATARRL*RSPVML
Trigger: TAGCATCACGGGGGACCGCAACAGCCGCCTGGCCGT...AGCGCCCTCATGGTGCTGGTGCTGTTGTGTGTAGGTCCCCTGGGGACACAAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
CDS-3UTR CAA 90 bp GAGGGCGCTCTCGACCCACACAAGCCCTGGTCCCCGTCAGTCAATGTGACTGAGTGCAGCAACTCGGCGTaGCCATCCCAGTCCCGCAGC +
Preference number: 5 (lower is better)
Translates to: EGALDPHKPWSPSVNVTECSNSA*PSQSRS
Trigger: GCTGCGGGACTGGGATGGCAACGCCGAGTTGCTGCA...CTCAGTCACATTGACTGACGGGGACCAGGGCTTGTGTGGGTCGAGAGCGCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR CAA 90 bp TGTGTCCCCAGGGGACCTACACACAACAGCACCAGCACCATGAGGGCGCTCTCGTGCAGCAACTCGGCGTaGCCATCCCAGTCCCGCAGC +
Preference number: 5 (lower is better)
Translates to: CVPRGPTHNSTSTMRALSCSNSA*PSQSRS
Trigger: GCTGCGGGACTGGGATGGCAACGCCGAGTTGCTGCA...CGAGAGCGCCCTCATGGTGCTGGTGCTGTTGTGTGTAGGTCCCCTGGGGACACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
CDS-3UTR CAA 90 bp TGGTCCACGCCTCTAGAGTCTGAGCATATCCTGCAGCCTCGATCTCAGGAGGCAGCAAAGCGCGGCGACTaGGACTGCACGGGTCCGCCC +
Preference number: 5 (lower is better)
Translates to: WSTPLESEHILQPRSQEAAKRGD*DCTGPP
Trigger: GGGCGGACCCGTGCAGTCCAAGTCGCCGCGCTTTGC...TGCCTCCTGAGATCGAGGCTGCAGGATATGCTCAGACTCTAGAGGCGTGGACCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR CAA 90 bp GAGTCTGAGCATATCCTGCAGCCTCGATCTCAGGAGGCAACGCATGCAGCCCCCTGCAGCAACTCGGCGTaGCCATCCCAGTCCCGCAGC +
Preference number: 5 (lower is better)
Translates to: ESEHILQPRSQEATHAAPCSNSA*PSQSRS
Trigger: GCTGCGGGACTGGGATGGCAACGCCGAGTTGCTGCA...GGGGGCTGCATGCGTTGCCTCCTGAGATCGAGGCTGCAGGATATGCTCAGACTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR CAA 90 bp TCGGGCAGAGCCAAGAGTCACCGTCTTTCGTGGGCCTGGGACCAGGCCCAGCCACGGAAGTACTGGCCGTaGAGGTTGGAATGGCTGCAG +
Preference number: 5 (lower is better)
Translates to: SGRAKSHRLSWAWDQAQPRKYWP*RLEWLQ
Trigger: CTGCAGCCATTCCAACCTCAACGGCCAGTACTTCCG...TGGCTGGGCCTGGTCCCAGGCCCACGAAAGACGGTGACTCTTGGCTCTGCCCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR CAA 90 bp CCACATCCTCGGGCAGAGCCAAGAGTCACCGTCTTTCGTGGGCCTGGGACCAGGGAAGCTCCATGCCCCTaGGTCCACGCCTCTAGAGTC +
Preference number: 5 (lower is better)
Translates to: PHPRAEPRVTVFRGPGTREAPCP*VHASRV
Trigger: GACTCTAGAGGCGTGGACCAAGGGGCATGGAGCTTC...CCTGGTCCCAGGCCCACGAAAGACGGTGACTCTTGGCTCTGCCCGAGGATGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR CAA 90 bp ACATCCTCGGGCAGAGCCAAGAGTCACCGTCTTTCGTGGGCCTGGGACCAGGCCGAAGCTCCATGCCCCTaGGTCCACGCCTCTAGAGTC +
Preference number: 5 (lower is better)
Translates to: TSSGRAKSHRLSWAWDQAEAPCP*VHASRV
Trigger: GACTCTAGAGGCGTGGACCAAGGGGCATGGAGCTTC...GGCCTGGTCCCAGGCCCACGAAAGACGGTGACTCTTGGCTCTGCCCGAGGATGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR CAA 90 bp CACCATGAGGGCGCTCTCGACCCACACAAGCCCTGGTCCCCGTCAGTCAATGTGTCCGCCCAGATACCATaGGCGCCTGCTTGTGTCCCC +
Preference number: 5 (lower is better)
Translates to: HHEGALDPHKPWSPSVNVSAQIP*APACVP
Trigger: GGGGACACAAGCAGGCGCCAATGGTATCTGGGCGGA...CACATTGACTGACGGGGACCAGGGCTTGTGTGGGTCGAGAGCGCCCTCATGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301455.7
ENST00000593998.5
CDS-3UTR CAA 90 bp CCACATCCTCGGGCAGAGCCAAGAGTCACCGTCTTTCGTGGGCCTGGGACCAGGTCTCCAGTCGTGGTCTaGGCCACATCCTCGGGCAGA +
Preference number: 5 (lower is better)
Translates to: PHPRAEPRVTVFRGPGTRSPVVV*ATSSGR
Trigger: TCTGCCCGAGGATGTGGCCAAGACCACGACTGGAGA...CCTGGTCCCAGGCCCACGAAAGACGGTGACTCTTGGCTCTGCCCGAGGATGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593998.5
CDS-3UTR CAA 90 bp TACACACAACAGCACCAGCACCATGAGGGCGCTCTCGACCCACACAAGCCCTGGGGGGGTAAGACCCGCTaGGTTGCAGAAGCCGCTGGA +
Preference number: 5 (lower is better)
Translates to: YTQQHQHHEGALDPHKPWGGKTR*VAEAAG
Trigger: TCCAGCGGCTTCTGCAACCAAGCGGGTCTTACCCCC...CCAGGGCTTGTGTGGGTCGAGAGCGCCCTCATGGTGCTGGTGCTGTTGTGTGTA
62% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR CAA 90 bp CCCTGCCCAGGCAGGGAACGGCCACATCCTCGGGCAGAGCCAAGAGTCACCGTCGTTCTGAGCCTTGAGTaGTGTCTGCAGGCTGTGAAG +
Preference number: 5 (lower is better)
Translates to: PCPGRERPHPRAEPRVTVVLSLE*CLQAVK
Trigger: CTTCACAGCCTGCAGACACAACTCAAGGCTCAGAAC...GACGGTGACTCTTGGCTCTGCCCGAGGATGTGGCCGTTCCCTGCCTGGGCAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000595079.5
CDS-3UTR CAA 90 bp GAGGGCGCTCTCGACCCACACAAGCCCTGGTCCCCGTCAGTCAATGTGACTGAGGAAGCTCCATGCCCCTaGGTCCACGCCTCTAGAGTC +
Preference number: 5 (lower is better)
Translates to: EGALDPHKPWSPSVNVTEEAPCP*VHASRV
Trigger: GACTCTAGAGGCGTGGACCAAGGGGCATGGAGCTTC...CTCAGTCACATTGACTGACGGGGACCAGGGCTTGTGTGGGTCGAGAGCGCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR CAA 90 bp GCCCAGATACCATTGGCGCCTGCTTGTGTCCCCAGGGGACCTACACACAACAGCACCATTGGCGCCTGCTaGTGTCCCCAGGGGACCTAC +
Preference number: 5 (lower is better)
Translates to: AQIPLAPACVPRGPTHNSTIGAC*CPQGTY
Trigger: GTAGGTCCCCTGGGGACACAAGCAGGCGCCAATGGT...GCTGTTGTGTGTAGGTCCCCTGGGGACACAAGCAGGCGCCAATGGTATCTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000594875.1
CDS-3UTR CAA 90 bp TTGTGTCCCCAGGGGACCTACACACAACAGCACCAGCACCATGAGGGCGCTCTCTCCGCCCAGATACCATaGGCGCCTGCTTGTGTCCCC +
Preference number: 5 (lower is better)
Translates to: LCPQGTYTQQHQHHEGALSAQIP*APACVP
Trigger: GGGGACACAAGCAGGCGCCAATGGTATCTGGGCGGA...GAGAGCGCCCTCATGGTGCTGGTGCTGTTGTGTGTAGGTCCCCTGGGGACACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000593998.5
ENST00000594875.1
CDS CCA 90 bp CAACTGGCTGGGCCATCTCGGGCAGCCTCTTTCTTCGGGCAGGCTTaGCCACCTCATGGTCTAGGTGCTTGTGGTCCAGGAGGCCAAACT +
Preference number: 5 (lower is better)
Translates to: QLAGPSRAASFFGQA*PPHGLGACGPGGQT
Trigger: AGTTTGGCCTCCTGGACCACAAGCACCTAGACCATGAGGTGGCCAAGCCTGCCCGAAGAAAGAGGCTGCCCGAGATGGCCCAGCCAGTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000594348.1
ENST00000595079.5
ENST00000597137.5
ENST00000598255.5
CDS-3UTR CAA 90 bp GCGCCTGCTTGTGTCCCCAGGGGACCTACACACAACAGCACCAGCACCATGAGGTGCTGCTGGGCCACCTaGTGGAAGAGTTGCTGGATC +
Preference number: 5 (lower is better)
Translates to: APACVPRGPTHNSTSTMRCCWAT*WKSCWI
Trigger: GATCCAGCAACTCTTCCACAAGGTGGCCCAGCAGCA...CCTCATGGTGCTGGTGCTGTTGTGTGTAGGTCCCCTGGGGACACAAGCAGGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000594875.1
CDS-3UTR CAA 90 bp TTGGAGCCCCTGCCCAGGCAGGGAACGGCCACATCCTCGGGCAGAGCCAAGAGTGAGGCCAAACTGGCTTaGCAGATGCTGAATTCGCAG +
Preference number: 5 (lower is better)
Translates to: LEPLPRQGTATSSGRAKSEAKLA*QMLNSQ
Trigger: CTGCGAATTCAGCATCTGCAAAGCCAGTTTGGCCTC...ACTCTTGGCTCTGCCCGAGGATGTGGCCGTTCCCTGCCTGGGCAGGGGCTCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000595079.5
CDS-3UTR CAA 90 bp AGTCGTGGTCTTCTTCTCTGTCCACAAGTTTCCAGATGGCCCCTCCTTGGAGCCACGGCCAGGCGGCTGTaGCGGTCCCCCGTGATGCTA +
Preference number: 5 (lower is better)
Translates to: SRGLLLCPQVSRWPLLGATARRL*RSPVML
Trigger: TAGCATCACGGGGGACCGCAACAGCCGCCTGGCCGT...GGCTCCAAGGAGGGGCCATCTGGAAACTTGTGGACAGAGAAGAAGACCACGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000595079.5
CDS-3UTR CAA 90 bp GCCTGCTTGTGTCCCCAGGGGACCTACACACAACAGCACCAGCACCATGAGGGCCGGAAGTACTGGCCGTaGAGGTTGGAATGGCTGCAG +
Preference number: 5 (lower is better)
Translates to: ACLCPQGTYTQQHQHHEGRKYWP*RLEWLQ
Trigger: CTGCAGCCATTCCAACCTCAACGGCCAGTACTTCCG...GCCCTCATGGTGCTGGTGCTGTTGTGTGTAGGTCCCCTGGGGACACAAGCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
CDS-3UTR CAA 90 bp GGCGCCTGCTTGTGTCCCCAGGGGACCTACACACAACAGCACCAGCACCATGAGCGGAAGTACTGGCCGTaGAGGTTGGAATGGCTGCAG +
Preference number: 5 (lower is better)
Translates to: GACLCPQGTYTQQHQHHERKYWP*RLEWLQ
Trigger: CTGCAGCCATTCCAACCTCAACGGCCAGTACTTCCG...CTCATGGTGCTGGTGCTGTTGTGTGTAGGTCCCCTGGGGACACAAGCAGGCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
CDS-3UTR CAA 90 bp CAGATACCATTGGCGCCTGCTTGTGTCCCCAGGGGACCTACACACAACAGCACCACCATTGGCGCCTGCTaGTGTCCCCAGGGGACCTAC +
Preference number: 5 (lower is better)
Translates to: QIPLAPACVPRGPTHNSTTIGAC*CPQGTY
Trigger: GTAGGTCCCCTGGGGACACAAGCAGGCGCCAATGGT...GGTGCTGTTGTGTGTAGGTCCCCTGGGGACACAAGCAGGCGCCAATGGTATCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000594875.1
CDS CCA 90 bp GCCATCTCGGGCAGCCTCTTTCTTCGGGCAGGCTTGGCCACCTCATaGTCTAGGTGCTTGTGGTCCAGGAGGCCAAACTGGCTTTGCAGA +
Preference number: 5 (lower is better)
Translates to: AISGSLFLRAGLATS*SRCLWSRRPNWLCR
Trigger: TCTGCAAAGCCAGTTTGGCCTCCTGGACCACAAGCACCTAGACCATGAGGTGGCCAAGCCTGCCCGAAGAAAGAGGCTGCCCGAGATGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000594348.1
ENST00000595079.5
ENST00000597137.5
ENST00000598255.5
CDS-3UTR CAA 90 bp CATTGTGAGCCGGGTCAACTGGCTGGGCCATCTCGGGCAGCCTCTTTCTTCGGGGTAAGACCCGCTTGGTaGCAGAAGCCGCTGGAAAGA +
Preference number: 5 (lower is better)
Translates to: HCEPGQLAGPSRAASFFGVRPAW*QKPLER
Trigger: TCTTTCCAGCGGCTTCTGCAACCAAGCGGGTCTTAC...CCCGAAGAAAGAGGCTGCCCGAGATGGCCCAGCCAGTTGACCCGGCTCACAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595079.5
CDS-3UTR CAA 90 bp GTCCCCAGGGGACCTACACACAACAGCACCAGCACCATGAGGGCGCTCTCGACCCACCTTGTGGAAGAGTaGCTGGATCCTGCTGTTCTG +
Preference number: 5 (lower is better)
Translates to: VPRGPTHNSTSTMRALSTHLVEE*LDPAVL
Trigger: CAGAACAGCAGGATCCAGCAACTCTTCCACAAGGTG...GGTCGAGAGCGCCCTCATGGTGCTGGTGCTGTTGTGTGTAGGTCCCCTGGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000594875.1
CDS-3UTR CAA 90 bp ACATCCTCGGGCAGAGCCAAGAGTCACCGTCTTTCGTGGGCCTGGGACCAGGCCCACCTTGTGGAAGAGTaGCTGGATCCTGCTGTTCTG +
Preference number: 5 (lower is better)
Translates to: TSSGRAKSHRLSWAWDQAHLVEE*LDPAVL
Trigger: CAGAACAGCAGGATCCAGCAACTCTTCCACAAGGTG...GGCCTGGTCCCAGGCCCACGAAAGACGGTGACTCTTGGCTCTGCCCGAGGATGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR CAA 90 bp TTGTGTCCCCAGGGGACCTACACACAACAGCACCAGCACCATGAGGGCGCTCTCTGCTGCTGGGCCACCTaGTGGAAGAGTTGCTGGATC +
Preference number: 5 (lower is better)
Translates to: LCPQGTYTQQHQHHEGALCCWAT*WKSCWI
Trigger: GATCCAGCAACTCTTCCACAAGGTGGCCCAGCAGCA...GAGAGCGCCCTCATGGTGCTGGTGCTGTTGTGTGTAGGTCCCCTGGGGACACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000594875.1
CDS-3UTR CAA 90 bp CCTGGCCAGCAAGGAGTGAAGCTCCATGCCCCTTGGTCCACGCCTCTAGAGTCTTGCTGCTGGGCCACCTaGTGGAAGAGTTGCTGGATC +
Preference number: 5 (lower is better)
Translates to: PGQQGVKLHAPWSTPLESCCWAT*WKSCWI
Trigger: GATCCAGCAACTCTTCCACAAGGTGGCCCAGCAGCA...AGACTCTAGAGGCGTGGACCAAGGGGCATGGAGCTTCACTCCTTGCTGGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR CAA 90 bp CGCCCAGATACCATTGGCGCCTGCTTGTGTCCCCAGGGGACCTACACACAACAGTTTCTTCGGGCAGGCTaGGCCACCTCATGGTCTAGG +
Preference number: 5 (lower is better)
Translates to: RPDTIGACLCPQGTYTQQFLRAG*ATSWSR
Trigger: CCTAGACCATGAGGTGGCCAAGCCTGCCCGAAGAAA...CTGTTGTGTGTAGGTCCCCTGGGGACACAAGCAGGCGCCAATGGTATCTGGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
CDS-3UTR CAA 90 bp CCTACACACAACAGCACCAGCACCATGAGGGCGCTCTCGACCCACACAAGCCCTTTTCTTCGGGCAGGCTaGGCCACCTCATGGTCTAGG +
Preference number: 5 (lower is better)
Translates to: PTHNSTSTMRALSTHTSPFLRAG*ATSWSR
Trigger: CCTAGACCATGAGGTGGCCAAGCCTGCCCGAAGAAA...AGGGCTTGTGTGGGTCGAGAGCGCCCTCATGGTGCTGGTGCTGTTGTGTGTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
CDS-3UTR CAA 90 bp TGCTTGTGTCCCCAGGGGACCTACACACAACAGCACCAGCACCATGAGGGCGCTTACTGGCCGTTGAGGTaGGAATGGCTGCAGGTGCCA +
Preference number: 5 (lower is better)
Translates to: CLCPQGTYTQQHQHHEGAYWPLR*EWLQVP
Trigger: TGGCACCTGCAGCCATTCCAACCTCAACGGCCAGTA...AGCGCCCTCATGGTGCTGGTGCTGTTGTGTGTAGGTCCCCTGGGGACACAAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
CDS-3UTR CAA 90 bp ACCATTGGCGCCTGCTTGTGTCCCCAGGGGACCTACACACAACAGCACCAGCACTACTGGCCGTTGAGGTaGGAATGGCTGCAGGTGCCA +
Preference number: 5 (lower is better)
Translates to: TIGACLCPQGTYTQQHQHYWPLR*EWLQVP
Trigger: TGGCACCTGCAGCCATTCCAACCTCAACGGCCAGTA...GTGCTGGTGCTGTTGTGTGTAGGTCCCCTGGGGACACAAGCAGGCGCCAATGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
CDS-3UTR CAA 90 bp AGATACCATTGGCGCCTGCTTGTGTCCCCAGGGGACCTACACACAACAGCACCAACCATTGGCGCCTGCTaGTGTCCCCAGGGGACCTAC +
Preference number: 5 (lower is better)
Translates to: RYHWRLLVSPGDLHTTAPTIGAC*CPQGTY
Trigger: GTAGGTCCCCTGGGGACACAAGCAGGCGCCAATGGT...TGGTGCTGTTGTGTGTAGGTCCCCTGGGGACACAAGCAGGCGCCAATGGTATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000594875.1
CDS-3UTR CAA 90 bp TGCTTGTGTCCCCAGGGGACCTACACACAACAGCACCAGCACCATGAGGGCGCTGTAAGACCCGCTTGGTaGCAGAAGCCGCTGGAAAGA +
Preference number: 5 (lower is better)
Translates to: CLCPQGTYTQQHQHHEGAVRPAW*QKPLER
Trigger: TCTTTCCAGCGGCTTCTGCAACCAAGCGGGTCTTAC...AGCGCCCTCATGGTGCTGGTGCTGTTGTGTGTAGGTCCCCTGGGGACACAAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
CDS-3UTR CAA 90 bp CAACTCCCTGGCCAGCAAGGAGTGAAGCTCCATGCCCCTTGGTCCACGCCTCTAGTAAGACCCGCTTGGTaGCAGAAGCCGCTGGAAAGA +
Preference number: 5 (lower is better)
Translates to: QLPGQQGVKLHAPWSTPLVRPAW*QKPLER
Trigger: TCTTTCCAGCGGCTTCTGCAACCAAGCGGGTCTTAC...TAGAGGCGTGGACCAAGGGGCATGGAGCTTCACTCCTTGCTGGCCAGGGAGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR CAA 90 bp GGCGCCTGCTTGTGTCCCCAGGGGACCTACACACAACAGCACCAGCACCATGAGGTTCTGAGCCTTGAGTaGTGTCTGCAGGCTGTGAAG +
Preference number: 5 (lower is better)
Translates to: GACLCPQGTYTQQHQHHEVLSLE*CLQAVK
Trigger: CTTCACAGCCTGCAGACACAACTCAAGGCTCAGAAC...CTCATGGTGCTGGTGCTGTTGTGTGTAGGTCCCCTGGGGACACAAGCAGGCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000594875.1
CDS-3UTR CAA 90 bp CTCGACCCACACAAGCCCTGGTCCCCGTCAGTCAATGTGACTGAGTCCGCCATTTGCTGCTGGGCCACCTaGTGGAAGAGTTGCTGGATC +
Preference number: 5 (lower is better)
Translates to: LDPHKPWSPSVNVTESAICCWAT*WKSCWI
Trigger: GATCCAGCAACTCTTCCACAAGGTGGCCCAGCAGCA...AATGGCGGACTCAGTCACATTGACTGACGGGGACCAGGGCTTGTGTGGGTCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR CAA 90 bp GACCCACACAAGCCCTGGTCCCCGTCAGTCAATGTGACTGAGTCCGCCATTGAGTTTCTTCGGGCAGGCTaGGCCACCTCATGGTCTAGG +
Preference number: 5 (lower is better)
Translates to: DPHKPWSPSVNVTESAIEFLRAG*ATSWSR
Trigger: CCTAGACCATGAGGTGGCCAAGCCTGCCCGAAGAAA...CTCAATGGCGGACTCAGTCACATTGACTGACGGGGACCAGGGCTTGTGTGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR CAA 90 bp CTCAGAAAGGGGGCTTCTCCAGTCGTGGTCTTCTTCTCTGTCCACAAGTTTCCAACGGCCAGGCGGCTGTaGCGGTCCCCCGTGATGCTA +
Preference number: 5 (lower is better)
Translates to: LRKGASPVVVFFSVHKFPTARRL*RSPVML
Trigger: TAGCATCACGGGGGACCGCAACAGCCGCCTGGCCGT...TGGAAACTTGTGGACAGAGAAGAAGACCACGACTGGAGAAGCCCCCTTTCTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000595079.5
CDS-3UTR CAA 90 bp CTCCATGCCCCTTGGTCCACGCCTCTAGAGTCTGAGCATATCCTGCAGCCTCGATACTGGCCGTTGAGGTaGGAATGGCTGCAGGTGCCA +
Preference number: 5 (lower is better)
Translates to: LHAPWSTPLESEHILQPRYWPLR*EWLQVP
Trigger: TGGCACCTGCAGCCATTCCAACCTCAACGGCCAGTA...TCGAGGCTGCAGGATATGCTCAGACTCTAGAGGCGTGGACCAAGGGGCATGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR CAA 90 bp GCCCCTTGGTCCACGCCTCTAGAGTCTGAGCATATCCTGCAGCCTCGATCTCAGCGGAAGTACTGGCCGTaGAGGTTGGAATGGCTGCAG +
Preference number: 5 (lower is better)
Translates to: APWSTPLESEHILQPRSQRKYWP*RLEWLQ
Trigger: CTGCAGCCATTCCAACCTCAACGGCCAGTACTTCCG...CTGAGATCGAGGCTGCAGGATATGCTCAGACTCTAGAGGCGTGGACCAAGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR CAA 90 bp CTCCAGTCGTGGTCTTCTTCTCTGTCCACAAGTTTCCAGATGGCCCCTCCTTGGTCCGCCCAGATACCATaGGCGCCTGCTTGTGTCCCC +
Preference number: 5 (lower is better)
Translates to: LQSWSSSLSTSFQMAPPWSAQIP*APACVP
Trigger: GGGGACACAAGCAGGCGCCAATGGTATCTGGGCGGA...CCAAGGAGGGGCCATCTGGAAACTTGTGGACAGAGAAGAAGACCACGACTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301455.7
CDS-3UTR CAA 90 bp CGCCCAGATACCATTGGCGCCTGCTTGTGTCCCCAGGGGACCTACACACAACAGGAGGCCAGTCTGGCTTaGCAGATGCTGAATTCGCAG +
Preference number: 5 (lower is better)
Translates to: RPDTIGACLCPQGTYTQQEASLA*QMLNSQ
Trigger: CTGCGAATTCAGCATCTGCAAAGCCAGACTGGCCTC...CTGTTGTGTGTAGGTCCCCTGGGGACACAAGCAGGCGCCAATGGTATCTGGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594875.1
CDS-3UTR CAA 90 bp CCCAGATACCATTGGCGCCTGCTTGTGTCCCCAGGGGACCTACACACAACAGCAGTAAGACCCGCTTGGTaGCAGAAGCCGCTGGAAAGA +
Preference number: 5 (lower is better)
Translates to: PRYHWRLLVSPGDLHTTAVRPAW*QKPLER
Trigger: TCTTTCCAGCGGCTTCTGCAACCAAGCGGGTCTTAC...TGCTGTTGTGTGTAGGTCCCCTGGGGACACAAGCAGGCGCCAATGGTATCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
CDS-3UTR CAA 90 bp TGCTTGTGTCCCCAGGGGACCTACACACAACAGCACCAGCACCATGAGGGCGCTGTTCTGAGCCTTGAGTaGTGTCTGCAGGCTGTGAAG +
Preference number: 5 (lower is better)
Translates to: CLCPQGTYTQQHQHHEGAVLSLE*CLQAVK
Trigger: CTTCACAGCCTGCAGACACAACTCAAGGCTCAGAAC...AGCGCCCTCATGGTGCTGGTGCTGTTGTGTGTAGGTCCCCTGGGGACACAAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000594875.1
CDS-3UTR CAA 90 bp ACCATTGGCGCCTGCTTGTGTCCCCAGGGGACCTACACACAACAGCACCAGCACGAGGCCAAACTGGCTTaGCAGATGCTGAATTCGCAG +
Preference number: 5 (lower is better)
Translates to: TIGACLCPQGTYTQQHQHEAKLA*QMLNSQ
Trigger: CTGCGAATTCAGCATCTGCAAAGCCAGTTTGGCCTC...GTGCTGGTGCTGTTGTGTGTAGGTCCCCTGGGGACACAAGCAGGCGCCAATGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
CDS-3UTR CAA 90 bp GTCCCCAGGGGACCTACACACAACAGCACCAGCACCATGAGGGCGCTCTCGACCCCATCTGAGGTCATCTaGCAGTTCACCAAAAATGGC +
Preference number: 5 (lower is better)
Translates to: VPRGPTHNSTSTMRALSTPSEVI*QFTKNG
Trigger: GCCATTTTTGGTGAACTGCAAGATGACCTCAGATGG...GGTCGAGAGCGCCCTCATGGTGCTGGTGCTGTTGTGTGTAGGTCCCCTGGGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000301455.7
ENST00000593998.5
CDS-3UTR CAA 90 bp CACAACAGCACCAGCACCATGAGGGCGCTCTCGACCCACACAAGCCCTGGTCCCCCATCTGAGGTCATCTaGCAGTTCACCAAAAATGGC +
Preference number: 5 (lower is better)
Translates to: HNSTSTMRALSTHTSPGPPSEVI*QFTKNG
Trigger: GCCATTTTTGGTGAACTGCAAGATGACCTCAGATGG...GGGACCAGGGCTTGTGTGGGTCGAGAGCGCCCTCATGGTGCTGGTGCTGTTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000593998.5
ENST00000595079.5
CDS-3UTR CAA 90 bp TCCAAGAACTCTGTGAGCTCCGCCCAGATACCATTGGCGCCTGCTTGTGTCCCCGTTCTGAGCCTTGAGTaGTGTCTGCAGGCTGTGAAG +
Preference number: 5 (lower is better)
Translates to: SKNSVSSAQIPLAPACVPVLSLE*CLQAVK
Trigger: CTTCACAGCCTGCAGACACAACTCAAGGCTCAGAAC...GGGGACACAAGCAGGCGCCAATGGTATCTGGGCGGAGCTCACAGAGTTCTTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000593998.5
ENST00000594875.1
CDS-3UTR CAA 90 bp GCCCCTTGGTCCACGCCTCTAGAGTCTGAGCATATCCTGCAGCCTCGATCTCAGCACCTTGTGGAAGAGTaGCTGGATCCTGCTGTTCTG +
Preference number: 5 (lower is better)
Translates to: APWSTPLESEHILQPRSQHLVEE*LDPAVL
Trigger: CAGAACAGCAGGATCCAGCAACTCTTCCACAAGGTG...CTGAGATCGAGGCTGCAGGATATGCTCAGACTCTAGAGGCGTGGACCAAGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000595079.5
CDS-3UTR CAA 90 bp GTCTTCTTCTCTGTCCACAAGTTTCCAGATGGCCCCTCCTTGGAGCCCCTGCCCGAGGCCAAACTGGCTTaGCAGATGCTGAATTCGCAG +
Preference number: 5 (lower is better)
Translates to: VFFSVHKFPDGPSLEPLPEAKLA*QMLNSQ
Trigger: CTGCGAATTCAGCATCTGCAAAGCCAGTTTGGCCTC...GGGCAGGGGCTCCAAGGAGGGGCCATCTGGAAACTTGTGGACAGAGAAGAAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000595079.5
CDS-3UTR CAA 90 bp GGTTGCTTTTATTCCAAGAACTCTGTGAGCTCCGCCCAGATACCATTGGCGCCTACCATTGGCGCCTGCTaGTGTCCCCAGGGGACCTAC +
Preference number: 5 (lower is better)
Translates to: GCFYSKNSVSSAQIPLAPTIGAC*CPQGTY
Trigger: GTAGGTCCCCTGGGGACACAAGCAGGCGCCAATGGT...AGGCGCCAATGGTATCTGGGCGGAGCTCACAGAGTTCTTGGAATAAAAGCAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000593998.5
ENST00000594875.1
CDS-3UTR CAA 90 bp TCTCCAGTCGTGGTCTTCTTCTCTGTCCACAAGTTTCCAGATGGCCCCTCCTTGTACTGGCCGTTGAGGTaGGAATGGCTGCAGGTGCCA +
Preference number: 5 (lower is better)
Translates to: SPVVVFFSVHKFPDGPSLYWPLR*EWLQVP
Trigger: TGGCACCTGCAGCCATTCCAACCTCAACGGCCAGTA...CAAGGAGGGGCCATCTGGAAACTTGTGGACAGAGAAGAAGACCACGACTGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000595079.5
CDS-3UTR CAA 90 bp AGTCGTGGTCTTCTTCTCTGTCCACAAGTTTCCAGATGGCCCCTCCTTGGAGCCCACCTTGTGGAAGAGTaGCTGGATCCTGCTGTTCTG +
Preference number: 5 (lower is better)
Translates to: SRGLLLCPQVSRWPLLGAHLVEE*LDPAVL
Trigger: CAGAACAGCAGGATCCAGCAACTCTTCCACAAGGTG...GGCTCCAAGGAGGGGCCATCTGGAAACTTGTGGACAGAGAAGAAGACCACGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000595079.5
CDS-3UTR CAA 90 bp TTATTCCAAGAACTCTGTGAGCTCCGCCCAGATACCATTGGCGCCTGCTTGTGTTGCTGCTGGGCCACCTaGTGGAAGAGTTGCTGGATC +
Preference number: 5 (lower is better)
Translates to: LFQELCELRPDTIGACLCCCWAT*WKSCWI
Trigger: GATCCAGCAACTCTTCCACAAGGTGGCCCAGCAGCA...ACACAAGCAGGCGCCAATGGTATCTGGGCGGAGCTCACAGAGTTCTTGGAATAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000593998.5
ENST00000594875.1
CDS-3UTR CAA 90 bp TCAGAAAGGGGGCTTCTCCAGTCGTGGTCTTCTTCTCTGTCCACAAGTTTCCAGTTTCTTCGGGCAGGCTaGGCCACCTCATGGTCTAGG +
Preference number: 5 (lower is better)
Translates to: SERGLLQSWSSSLSTSFQFLRAG*ATSWSR
Trigger: CCTAGACCATGAGGTGGCCAAGCCTGCCCGAAGAAA...CTGGAAACTTGTGGACAGAGAAGAAGACCACGACTGGAGAAGCCCCCTTTCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000595079.5
CDS-3UTR CAA 90 bp CCAGATACCATTGGCGCCTGCTTGTGTCCCCAGGGGACCTACACACAACAGCACCCATCTGAGGTCATCTaGCAGTTCACCAAAAATGGC +
Preference number: 5 (lower is better)
Translates to: PDTIGACLCPQGTYTQQHPSEVI*QFTKNG
Trigger: GCCATTTTTGGTGAACTGCAAGATGACCTCAGATGG...GTGCTGTTGTGTGTAGGTCCCCTGGGGACACAAGCAGGCGCCAATGGTATCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301455.7
ENST00000593998.5
CDS-3UTR CAA 90 bp TGCTTTTATTCCAAGAACTCTGTGAGCTCCGCCCAGATACCATTGGCGCCTGCTCACCTTGTGGAAGAGTaGCTGGATCCTGCTGTTCTG +
Preference number: 5 (lower is better)
Translates to: CFYSKNSVSSAQIPLAPAHLVEE*LDPAVL
Trigger: CAGAACAGCAGGATCCAGCAACTCTTCCACAAGGTG...AGCAGGCGCCAATGGTATCTGGGCGGAGCTCACAGAGTTCTTGGAATAAAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000593998.5
ENST00000594875.1
CDS-3UTR CAA 90 bp GGTTGCTTTTATTCCAAGAACTCTGTGAGCTCCGCCCAGATACCATTGGCGCCTGAGGCCAAACTGGCTTaGCAGATGCTGAATTCGCAG +
Preference number: 5 (lower is better)
Translates to: GCFYSKNSVSSAQIPLAPEAKLA*QMLNSQ
Trigger: CTGCGAATTCAGCATCTGCAAAGCCAGTTTGGCCTC...AGGCGCCAATGGTATCTGGGCGGAGCTCACAGAGTTCTTGGAATAAAAGCAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301455.7
ENST00000593998.5
CDS-3UTR CAA 90 bp CTGAGGTTGCTTTTATTCCAAGAACTCTGTGAGCTCCGCCCAGATACCATTGGCGTTCTGAGCCTTGAGTaGTGTCTGCAGGCTGTGAAG +
Preference number: 5 (lower is better)
Translates to: LRLLLFQELCELRPDTIGVLSLE*CLQAVK
Trigger: CTTCACAGCCTGCAGACACAACTCAAGGCTCAGAAC...GCCAATGGTATCTGGGCGGAGCTCACAGAGTTCTTGGAATAAAAGCAACCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301455.7
ENST00000593998.5
ENST00000594875.1
CDS CCA 72 bp GCACGGGTCCGCCCTGAGCGCTCAGTAGCACGGCGGTaGCGGCGCAGAGCATCAGGGCTGCCCCGGCCGTCG +
Preference number: 6 (lower is better)
Translates to: ARVRPERSVARR*RRRASGLPRPS
Trigger: CGACGGCCGGGGCAGCCCTGATGCTCTGCGCCGCCACCGCCGTGCTACTGAGCGCTCAGGGCGGACCCGTGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000594348.1
ENST00000595079.5
ENST00000598255.5
ENST00000599192.5
ENST00000601770.1
ENST00000601886.1
CDS TCA 72 bp GGGGCTAACGGGAGGTCGGTGGACCCCTCGGTTCCCTaGCAGGCGGACCCGCACGCGCTCAGGCGCCGCTCC +
Preference number: 6 (lower is better)
Translates to: GANGRSVDPSVP*QADPHALRRRS
Trigger: GGAGCGGCGCCTGAGCGCGTGCGGGTCCGCCTGTCAGGGAACCGAGGGGTCCACCGACCTCCCGTTAGCCCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000594348.1
ENST00000594875.1
ENST00000598255.5
ENST00000599192.5
ENST00000601886.1
CDS TCA 72 bp GCAAAGCGCGGCGACTTGGACTGCACGGGTCCGCCCTaGGCGCTCAGTAGCACGGCGGTGGCGGCGCAGAGC +
Preference number: 6 (lower is better)
Translates to: AKRGDLDCTGPP*ALSSTAVAAQS
Trigger: GCTCTGCGCCGCCACCGCCGTGCTACTGAGCGCTCAGGGCGGACCCGTGCAGTCCAAGTCGCCGCGCTTTGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000594348.1
ENST00000595079.5
ENST00000598255.5
ENST00000599192.5
ENST00000601770.1
ENST00000601886.1
CDS CCA 72 bp GGTCCACCCGGCTCTCAGGGGCTAACGGGAGGTCGGTaGACCCCTCGGTTCCCTGACAGGCGGACCCGCACG +
Preference number: 6 (lower is better)
Translates to: GPPGSQGLTGGR*TPRFPDRRTRT
Trigger: CGTGCGGGTCCGCCTGTCAGGGAACCGAGGGGTCCACCGACCTCCCGTTAGCCCCTGAGAGCCGGGTGGACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000594348.1
ENST00000594875.1
ENST00000598255.5
ENST00000599192.5
CDS GCA 72 bp GTGCGCTCCGCGTGTTCGCGCAGCCCCTGGCCGAGCTaGAGGAGTCCGTGCGCCAGGACATTCATCTCGTCC +
Preference number: 6 (lower is better)
Translates to: VRSACSRSPWPS*RSPCARTFISS
Trigger: GGACGAGATGAATGTCCTGGCGCACGGACTCCTGCAGCTCGGCCAGGGGCTGCGCGAACACGCGGAGCGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000594348.1
ENST00000594875.1
ENST00000595079.5
ENST00000598255.5
ENST00000599192.5
ENST00000601770.1
ENST00000601886.1
CDS CCA 72 bp GACTGGAGACGCGGAGGACCGGGGGTAAGACCCGCTTaGTTGCAGAAGCCGCCAGTGGCGGAGAGGGCGCAC +
Preference number: 6 (lower is better)
Translates to: DWRRGGPGVRPA*LQKPPVAERAH
Trigger: GTGCGCCCTCTCCGCCACTGGCGGCTTCTGCAACCAAGCGGGTCTTACCCCCGGTCCTCCGCGTCTCCAGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000599192.5
ENST00000601770.1
ENST00000601886.1
CDS CAA 72 bp TGGAGACGCGGAGGACCGGGGGTAAGACCCGCTTGGTaGCAGAAGCCGCCAGTGGCGGAGAGGGCGCACGCT +
Preference number: 6 (lower is better)
Translates to: WRRGGPGVRPAW*QKPPVAERAHA
Trigger: AGCGTGCGCCCTCTCCGCCACTGGCGGCTTCTGCAACCAAGCGGGTCTTACCCCCGGTCCTCCGCGTCTCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000599192.5
ENST00000601770.1
ENST00000601886.1
CDS CCA 72 bp CATTCATCTCGTCCCAGGACGCAAAGCGCGGCGACTTaGACTGCACGGGTCCGCCCTGAGCGCTCAGTAGCA +
Preference number: 6 (lower is better)
Translates to: HSSRPRTQSAAT*TARVRPERSVA
Trigger: TGCTACTGAGCGCTCAGGGCGGACCCGTGCAGTCCAAGTCGCCGCGCTTTGCGTCCTGGGACGAGATGAATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000594348.1
ENST00000595079.5
ENST00000598255.5
ENST00000599192.5
ENST00000601770.1
ENST00000601886.1
CDS CCA 72 bp ATGGTGCAGGCGGCTGACATTGTGAGCCGGGTCAACTaGCTGGGCCATCTCGGGCAGCCTCTTTCTTCGGGC +
Preference number: 6 (lower is better)
Translates to: MVQAADIVSRVN*LGHLGQPLSSG
Trigger: GCCCGAAGAAAGAGGCTGCCCGAGATGGCCCAGCCAGTTGACCCGGCTCACAATGTCAGCCGCCTGCACCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393962.6
ENST00000598255.5
CDS CAA 90 bp ACCCGCTTGGTTGCAGAAGCCGCCAGTGGCGGAGAGGGCGCACGCTaGAGGTCAAGACTTCCAGACCAGCCCGGCCAACATCGTGAAACC +
Preference number: 6 (lower is better)
Translates to: TRLVAEAASGGEGAR*RSRLPDQPGQHRET
Trigger: GGTTTCACGATGTTGGCCGGGCTGGTCTGGAAGTCTTGACCTCAAGCGTGCGCCCTCTCCGCCACTGGCGGCTTCTGCAACCAAGCGGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000599192.5
ENST00000601770.1
ENST00000601886.1
CDS CCA 72 bp GGGCCATCTCGGGCAGCCTCTTTCTTCGGGCAGGCTTaGCCACCTCATGGTCTAGGTGCTTGTGGTCCAGGA +
Preference number: 6 (lower is better)
Translates to: GPSRAASFFGQA*PPHGLGACGPG
Trigger: TCCTGGACCACAAGCACCTAGACCATGAGGTGGCCAAGCCTGCCCGAAGAAAGAGGCTGCCCGAGATGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000594348.1
ENST00000595079.5
ENST00000597137.5
ENST00000598255.5
CDS CAA 72 bp TGGGCCATCTCGGGCAGCCTCTTTCTTCGGGCAGGCTaGGCCACCTCATGGTCTAGGTGCTTGTGGTCCAGG +
Preference number: 6 (lower is better)
Translates to: WAISGSLFLRAG*ATSWSRCLWSR
Trigger: CCTGGACCACAAGCACCTAGACCATGAGGTGGCCAAGCCTGCCCGAAGAAAGAGGCTGCCCGAGATGGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000594348.1
ENST00000595079.5
ENST00000597137.5
ENST00000598255.5
CDS CAA 90 bp TCAACTGGCTGGGCCATCTCGGGCAGCCTCTTTCTTCGGGCAGGCTaGGCCACCTCATGGTCTAGGTGCTTGTGGTCCAGGAGGCCAAAC +
Preference number: 6 (lower is better)
Translates to: STGWAISGSLFLRAG*ATSWSRCLWSRRPN
Trigger: GTTTGGCCTCCTGGACCACAAGCACCTAGACCATGAGGTGGCCAAGCCTGCCCGAAGAAAGAGGCTGCCCGAGATGGCCCAGCCAGTTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000594348.1
ENST00000595079.5
ENST00000597137.5
ENST00000598255.5
CDS CCA 72 bp GACTGGAGACGCGGAGGACCGGGGGTAAGACCCGCTTaGTTGCAGAAGCCGCTGGAAAGAATCGGATCACAG +
Preference number: 6 (lower is better)
Translates to: DWRRGGPGVRPA*LQKPLERIGSQ
Trigger: CTGTGATCCGATTCTTTCCAGCGGCTTCTGCAACCAAGCGGGTCTTACCCCCGGTCCTCCGCGTCTCCAGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000594348.1
ENST00000595079.5
ENST00000598255.5
CDS CCA 72 bp GGCAGCCTCTTTCTTCGGGCAGGCTTGGCCACCTCATaGTCTAGGTGCTTGTGGTCCAGGAGGCCAAACTGG +
Preference number: 6 (lower is better)
Translates to: GSLFLRAGLATS*SRCLWSRRPNW
Trigger: CCAGTTTGGCCTCCTGGACCACAAGCACCTAGACCATGAGGTGGCCAAGCCTGCCCGAAGAAAGAGGCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000594348.1
ENST00000595079.5
ENST00000597137.5
ENST00000598255.5
CDS CAA 72 bp TGGAGACGCGGAGGACCGGGGGTAAGACCCGCTTGGTaGCAGAAGCCGCTGGAAAGAATCGGATCACAGTCG +
Preference number: 6 (lower is better)
Translates to: WRRGGPGVRPAW*QKPLERIGSQS
Trigger: CGACTGTGATCCGATTCTTTCCAGCGGCTTCTGCAACCAAGCGGGTCTTACCCCCGGTCCTCCGCGTCTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000594348.1
ENST00000595079.5
ENST00000598255.5
CDS TCA 72 bp TCGACCCACACAAGCCCTGGTCCCCGTCAGTCAATGTaGCTGAGTCCGCCATTGAGGCCAGTCTGGCTTTGC +
Preference number: 6 (lower is better)
Translates to: STHTSPGPRQSM*LSPPLRPVWLC
Trigger: GCAAAGCCAGACTGGCCTCAATGGCGGACTCAGTCACATTGACTGACGGGGACCAGGGCTTGTGTGGGTCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594875.1
CDS CAA 90 bp CTGCTTCTCCAGGTGCCGCTGCTGCTGGGCCACCTTGTGGAAGAGTaGCTGGATCCTGCTGTTCTGAGCCTTGAGTTGTGTCTGCAGGCT +
Preference number: 6 (lower is better)
Translates to: LLLQVPLLLGHLVEE*LDPAVLSLELCLQA
Trigger: AGCCTGCAGACACAACTCAAGGCTCAGAACAGCAGGATCCAGCAACTCTTCCACAAGGTGGCCCAGCAGCAGCGGCACCTGGAGAAGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000594348.1
ENST00000594875.1
ENST00000595079.5
ENST00000598255.5
CDS TCA 72 bp TTGTGGTCCAGGAGGCCAAACTGGCTTTGCAGATGCTaGATTCGCAGGTGCTGCTTCTCCAGGTGCCGCTGC +
Preference number: 6 (lower is better)
Translates to: LWSRRPNWLCRC*IRRCCFSRCRC
Trigger: GCAGCGGCACCTGGAGAAGCAGCACCTGCGAATTCAGCATCTGCAAAGCCAGTTTGGCCTCCTGGACCACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000594348.1
ENST00000595079.5
ENST00000597137.5
ENST00000598255.5
CDS CAA 90 bp CTGCTTCTCCAGGTGCCGCTGCTGCTGGGCCACCTTGTGGAAGAGTaGCTGGATCCTGCTGTTCTGAGCCTTGAGTTGTGTCAAAAGTCC +
Preference number: 6 (lower is better)
Translates to: LLLQVPLLLGHLVEE*LDPAVLSLELCQKS
Trigger: GGACTTTTGACACAACTCAAGGCTCAGAACAGCAGGATCCAGCAACTCTTCCACAAGGTGGCCCAGCAGCAGCGGCACCTGGAGAAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597137.5
CDS TCA 72 bp TGTGGAAGAGTTGCTGGATCCTGCTGTTCTGAGCCTTaGGTTGTGTCTGCAGGCTGTGAAGGACCCGCACGC +
Preference number: 6 (lower is better)
Translates to: CGRVAGSCCSEP*VVSAGCEGPAR
Trigger: GCGTGCGGGTCCTTCACAGCCTGCAGACACAACTCAAGGCTCAGAACAGCAGGATCCAGCAACTCTTCCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595079.5
CDS GCA 72 bp TTTCTTCGGGCAGGCTTGGCCACCTCATGGTCTAGGTaGTTGTGGTCCAGGAGGCCAAACTGGCTTTGCAGA +
Preference number: 6 (lower is better)
Translates to: FLRAGLATSWSR*LWSRRPNWLCR
Trigger: TCTGCAAAGCCAGTTTGGCCTCCTGGACCACAAGCACCTAGACCATGAGGTGGCCAAGCCTGCCCGAAGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000301455.7
ENST00000393962.6
ENST00000593998.5
ENST00000594348.1
ENST00000595079.5
ENST00000597137.5
ENST00000598255.5
CDS GCA 72 bp GCCAACATCGTGAAACCCAGTCTCTACAAAAGTCCTTaGCTTGCGGAGGCTTCGTGTGACCTCCATCCCAAG +
Preference number: 6 (lower is better)
Translates to: ANIVKPSLYKSP*LAEASCDLHPK
Trigger: CTTGGGATGGAGGTCACACGAAGCCTCCGCAAGGCAAGGACTTTTGTAGAGACTGGGTTTCACGATGTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599192.5
CDS TCA 72 bp GCCACCTTGTGGAAGAGTTGCTGGATCCTGCTGTTCTaGGCCTTGAGTTGTGTCAAAAGTCCTTGCCTTGCG +
Preference number: 6 (lower is better)
Translates to: ATLWKSCWILLF*ALSCVKSPCLA
Trigger: CGCAAGGCAAGGACTTTTGACACAACTCAAGGCTCAGAACAGCAGGATCCAGCAACTCTTCCACAAGGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597137.5