RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AMER1 (Homo sapiens)

Ensembl gene IDs: ENSG00000184675

Ensembl transcript IDs: ENST00000374869.8

Found 520 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCCCTTCTCCAGCAGGGTCTGGAGGCTGGTGATGGCTCTACCGCCTaGTGTGGCTGGCACAGTCCACATGTAGACAGGAGCTCAAGCTGC +
Preference number: 1 (lower is better)
Translates to: ALLQQGLEAGDGSTA*CGWHSPHVDRSSSC
Trigger: GCAGCTTGAGCTCCTGTCTACATGTGGACTGTGCCAGCCACAGCAGGCGGTAGAGCCATCACCAGCCTCCAGACCCTGCTGGAGAAGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR GCA 90 bp GCTGAGGGCAGGTGGGGTGGTGGCACTGGCACAGGTAAGGAAAGCTaGTGGCAGCAGGATGAAGGGTACACACCCAGCCTCCTGAGTGTG +
Preference number: 1 (lower is better)
Translates to: AEGRWGGGTGTGKES*WQQDEGYTPSLLSV
Trigger: CACACTCAGGAGGCTGGGTGTGTACCCTTCATCCTGCTGCCAGCAGCTTTCCTTACCTGTGCCAGTGCCACCACCCCACCTGCCCTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR CCA 90 bp CAGCAGGGTCTGGAGGCTGGTGATGGCTCTACCGCCTGCTGTGGCTaGCACAGTCCACATGTAGACAGGAGCTCAAGCTGCCCTGAAAGA +
Preference number: 1 (lower is better)
Translates to: QQGLEAGDGSTACCG*HSPHVDRSSSCPER
Trigger: TCTTTCAGGGCAGCTTGAGCTCCTGTCTACATGTGGACTGTGCCAGCCACAGCAGGCGGTAGAGCCATCACCAGCCTCCAGACCCTGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR CCA 90 bp TTTTTCTCTTCCCAGATAGGCTGGTGGCCCTTCTCCAGCAGGGTCTaGAGGCTGGTGATGGCTCTACCGCCTGCTGTGGCTGGCACAGTC +
Preference number: 1 (lower is better)
Translates to: FFSSQIGWWPFSSRV*RLVMALPPAVAGTV
Trigger: GACTGTGCCAGCCACAGCAGGCGGTAGAGCCATCACCAGCCTCCAGACCCTGCTGGAGAAGGGCCACCAGCCTATCTGGGAAGAGAAAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR CCA 90 bp AGCCAAAGGTTGGCCACCTCCTTTTTCTCTTCCCAGATAGGCTGGTaGCCCTTCTCCAGCAGGGTCTGGAGGCTGGTGATGGCTCTACCG +
Preference number: 1 (lower is better)
Translates to: SQRLATSFFSSQIGW*PFSSRVWRLVMALP
Trigger: CGGTAGAGCCATCACCAGCCTCCAGACCCTGCTGGAGAAGGGCCACCAGCCTATCTGGGAAGAGAAAAAGGAGGTGGCCAACCTTTGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR GCA 90 bp TGTGTCAGGGCTATGCCAGTGCCCCTCAGAGACAATGCCTCATGCTaGCTTCCTGATCCTGAGGGCAGCTCTCAGCCCTTAGCCAAAGGT +
Preference number: 1 (lower is better)
Translates to: CVRAMPVPLRDNASC*LPDPEGSSQPLAKG
Trigger: ACCTTTGGCTAAGGGCTGAGAGCTGCCCTCAGGATCAGGAAGGCAGCATGAGGCATTGTCTCTGAGGGGCACTGGCATAGCCCTGACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR GCA 90 bp AAGTGTGTCAGGGCTATGCCAGTGCCCCTCAGAGACAATGCCTCATaGTGCCTTCCTGATCCTGAGGGCAGCTCTCAGCCCTTAGCCAAA +
Preference number: 1 (lower is better)
Translates to: KCVRAMPVPLRDNAS*CLPDPEGSSQPLAK
Trigger: TTTGGCTAAGGGCTGAGAGCTGCCCTCAGGATCAGGAAGGCAGCATGAGGCATTGTCTCTGAGGGGCACTGGCATAGCCCTGACACACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR CCA 90 bp CTTAGCCAAAGGTTGGCCACCTCCTTTTTCTCTTCCCAGATAGGCTaGTGGCCCTTCTCCAGCAGGGTCTGGAGGCTGGTGATGGCTCTA +
Preference number: 1 (lower is better)
Translates to: LSQRLATSFFSSQIG*WPFSSRVWRLVMAL
Trigger: TAGAGCCATCACCAGCCTCCAGACCCTGCTGGAGAAGGGCCACCAGCCTATCTGGGAAGAGAAAAAGGAGGTGGCCAACCTTTGGCTAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR CCA 90 bp CAAGCCAGCACTAGTCTGTGTTTGGAAACAGGCCTGAAGCTTGGCTaGCTCTCCCAATGTCACCCTGTGCTGTCAACACCATGGGTCCCC +
Preference number: 1 (lower is better)
Translates to: QASTSLCLETGLKLG*LSQCHPVLSTPWVP
Trigger: GGGGACCCATGGTGTTGACAGCACAGGGTGACATTGGGAGAGCCAGCCAAGCTTCAGGCCTGTTTCCAAACACAGACTAGTGCTGGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR CCA 90 bp GCCCCAAGGCAGTGCTTCCTTGGAGACTCTAAAGCACCAAGAAACTaGCATCCTGGCCCTGGGAGAGGCCTACTAGGTGGCCTTCTCTAT +
Preference number: 1 (lower is better)
Translates to: APRQCFLGDSKAPRN*HPGPGRGLLGGLLY
Trigger: ATAGAGAAGGCCACCTAGTAGGCCTCTCCCAGGGCCAGGATGCCAGTTTCTTGGTGCTTTAGAGTCTCCAAGGAAGCACTGCCTTGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR TCA 90 bp TGCTGGCAGCAGGATGAAGGGTACACACCCAGCCTCCTGAGTGTGTaGAGCTACTTCCCTTCTTGGCATAGGACTAAGGAGGGAGAGAGA +
Preference number: 1 (lower is better)
Translates to: CWQQDEGYTPSLLSV*SYFPSWHRTKEGER
Trigger: TCTCTCTCCCTCCTTAGTCCTATGCCAAGAAGGGAAGTAGCTTCACACACTCAGGAGGCTGGGTGTGTACCCTTCATCCTGCTGCCAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR TCA 90 bp AGGAAAGCTGCTGGCAGCAGGATGAAGGGTACACACCCAGCCTCCTaGGTGTGTGAAGCTACTTCCCTTCTTGGCATAGGACTAAGGAGG +
Preference number: 1 (lower is better)
Translates to: RKAAGSRMKGTHPAS*VCEATSLLGIGLRR
Trigger: CCTCCTTAGTCCTATGCCAAGAAGGGAAGTAGCTTCACACACTCAGGAGGCTGGGTGTGTACCCTTCATCCTGCTGCCAGCAGCTTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR CCA 90 bp GCTGTCCAAACCATGAACTCTCACTCAGCCCCAGGCCCTACTCTGTaGTGTGTGACCTTCCAAAGCCCAACAAAGTGTGTCAGGGCTATG +
Preference number: 1 (lower is better)
Translates to: AVQTMNSHSAPGPTL*CVTFQSPTKCVRAM
Trigger: CATAGCCCTGACACACTTTGTTGGGCTTTGGAAGGTCACACACCACAGAGTAGGGCCTGGGGCTGAGTGAGAGTTCATGGTTTGGACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR CCA 90 bp CACCATCCCAGAGCAGCTTTGGTAAGAGGCCAGAAAGTTGGAATTTaGGCACTTCTCTCTTGGAATGCTGTGCTTGGGGTAAGGAGGGCC +
Preference number: 1 (lower is better)
Translates to: HHPRAALVRGQKVGI*ALLSWNAVLGVRRA
Trigger: GGCCCTCCTTACCCCAAGCACAGCATTCCAAGAGAGAAGTGCCCAAATTCCAACTTTCTGGCCTCTTACCAAAGCTGCTCTGGGATGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR GCA 90 bp GTGGTGGTGTTAGTGCCATGCAAATTCATGTGGTGCTTCCAGGGGTaGAGCTTCTACCAGCCAGGTCTGCTATTTGTGAGTAAGGGCACT +
Preference number: 1 (lower is better)
Translates to: VVVLVPCKFMWCFQG*SFYQPGLLFVSKGT
Trigger: AGTGCCCTTACTCACAAATAGCAGACCTGGCTGGTAGAAGCTGCACCCCTGGAAGCACCACATGAATTTGCATGGCACTAACACCACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR GCA 90 bp TCTAGAAATTCAAAGGAACCTGCTTCTGCAGCCACATATCCTGGCTaGCCCACTTCAGGTGGTAAGGATCCTATTCCTGGGCTGGCTAGG +
Preference number: 1 (lower is better)
Translates to: SRNSKEPASAATYPG*PTSGGKDPIPGLAR
Trigger: CCTAGCCAGCCCAGGAATAGGATCCTTACCACCTGAAGTGGGGCAGCCAGGATATGTGGCTGCAGAAGCAGGTTCCTTTGAATTTCTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR CCA 90 bp CCAGAAAGTTGGAATTTGGGCACTTCTCTCTTGGAATGCTGTGCTTaGGGTAAGGAGGGCCTTCCTCACCCTCTTTCATTCTCCAGCTCC +
Preference number: 1 (lower is better)
Translates to: PESWNLGTSLLECCA*GKEGLPHPLSFSSS
Trigger: GGAGCTGGAGAATGAAAGAGGGTGAGGAAGGCCCTCCTTACCCCAAGCACAGCATTCCAAGAGAGAAGTGCCCAAATTCCAACTTTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR CCA 90 bp TCAGCCCCACCATCCCAGAGCAGCTTTGGTAAGAGGCCAGAAAGTTaGAATTTGGGCACTTCTCTCTTGGAATGCTGTGCTTGGGGTAAG +
Preference number: 1 (lower is better)
Translates to: SAPPSQSSFGKRPES*NLGTSLLECCAWGK
Trigger: CTTACCCCAAGCACAGCATTCCAAGAGAGAAGTGCCCAAATTCCAACTTTCTGGCCTCTTACCAAAGCTGCTCTGGGATGGTGGGGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR GCA 90 bp CATGGATGCAGGAGAAGGGAGGGTGCCATTCATTCCATAAAGGGCTaGAACTGCCAAGAAGCCCTGTCATTTGATGATGCTAAGGACTCG +
Preference number: 1 (lower is better)
Translates to: HGCRRREGAIHSIKG*NCQEALSFDDAKDS
Trigger: CGAGTCCTTAGCATCATCAAATGACAGGGCTTCTTGGCAGTTGCAGCCCTTTATGGAATGAATGGCACCCTCCCTTCTCCTGCATCCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR GCA 90 bp GGTAAGAGGCCAGAAAGTTGGAATTTGGGCACTTCTCTCTTGGAATaGTGTGCTTGGGGTAAGGAGGGCCTTCCTCACCCTCTTTCATTC +
Preference number: 1 (lower is better)
Translates to: GKRPESWNLGTSLLE*CAWGKEGLPHPLSF
Trigger: GAATGAAAGAGGGTGAGGAAGGCCCTCCTTACCCCAAGCACAGCATTCCAAGAGAGAAGTGCCCAAATTCCAACTTTCTGGCCTCTTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR CCA 90 bp GAAGCTACTTCCCTTCTTGGCATAGGACTAAGGAGGGAGAGAGACTaGTGTTTACTGAACCCATTATCCGGGCAGTCTTGTGGCCTGGTA +
Preference number: 1 (lower is better)
Translates to: EATSLLGIGLRRERD*CLLNPLSGQSCGLV
Trigger: TACCAGGCCACAAGACTGCCCGGATAATGGGTTCAGTAAACACCAGTCTCTCTCCCTCCTTAGTCCTATGCCAAGAAGGGAAGTAGCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR TCA 90 bp CCTGTCTTGGGAGTGCAAACCTGGGGCCTTATTACAGAGTCCAAATaGTGGGATGGGCAAGGCTTAAGGAACATTTTGTGTTGGGAGGCT +
Preference number: 1 (lower is better)
Translates to: PVLGVQTWGLITESK*WDGQGLRNILCWEA
Trigger: AGCCTCCCAACACAAAATGTTCCTTAAGCCTTGCCCATCCCATCATTTGGACTCTGTAATAAGGCCCCAGGTTTGCACTCCCAAGACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR TCA 90 bp GGACACATCCCCTGGCCAAGAAACAGTTTGCCCACAAAGTCACCTTaGCTTAGGGGGCAAACAGCATCTGTTCCCAAGCTAAATTGCCAT +
Preference number: 1 (lower is better)
Translates to: GHIPWPRNSLPTKSP*LRGQTASVPKLNCH
Trigger: ATGGCAATTTAGCTTGGGAACAGATGCTGTTTGCCCCCTAAGTCAAGGTGACTTTGTGGGCAAACTGTTTCTTGGCCAGGGGATGTGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR GCA 90 bp TGCAGGAGAAGGGAGGGTGCCATTCATTCCATAAAGGGCTGCAACTaGCAAGAAGCCCTGTCATTTGATGATGCTAAGGACTCGGCTAAT +
Preference number: 1 (lower is better)
Translates to: CRRREGAIHSIKGCN*QEALSFDDAKDSAN
Trigger: ATTAGCCGAGTCCTTAGCATCATCAAATGACAGGGCTTCTTGGCAGTTGCAGCCCTTTATGGAATGAATGGCACCCTCCCTTCTCCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR GCA 90 bp GTCTTCCTTCCTCCCCTAGGCTGCCATTGGGTTTCAGCCACAAACTaGTTAGCTCTAGAAATTCAAAGGAACCTGCTTCTGCAGCCACAT +
Preference number: 1 (lower is better)
Translates to: VFLPPLGCHWVSATN*LALEIQRNLLLQPH
Trigger: ATGTGGCTGCAGAAGCAGGTTCCTTTGAATTTCTAGAGCTAAGCAGTTTGTGGCTGAAACCCAATGGCAGCCTAGGGGAGGAAGGAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR CCA 90 bp GGGAGTGCAAACCTGGGGCCTTATTACAGAGTCCAAATGATGGGATaGGCAAGGCTTAAGGAACATTTTGTGTTGGGAGGCTTGAGAAGG +
Preference number: 1 (lower is better)
Translates to: GSANLGPYYRVQMMG*ARLKEHFVLGGLRR
Trigger: CCTTCTCAAGCCTCCCAACACAAAATGTTCCTTAAGCCTTGCCCATCCCATCATTTGGACTCTGTAATAAGGCCCCAGGTTTGCACTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR TCA 90 bp AGGAGTTCCCCAAAGCCTCTCTTCTGGGAAAATGTCACAATCAACTaGGCTCCTAGGAAGTCCTATGCAAGGGTTTCCTCAACGAGATGG +
Preference number: 1 (lower is better)
Translates to: RSSPKPLFWENVTIN*APRKSYARVSSTRW
Trigger: CCATCTCGTTGAGGAAACCCTTGCATAGGACTTCCTAGGAGCTCAGTTGATTGTGACATTTTCCCAGAAGAGAGGCTTTGGGGAACTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR CCA 90 bp GATAAAAGCTCTTTAAAGGGCCCAGAACAGCAGCTGAGATGCCTTTaGTATCCTGTCTTGGGAGTGCAAACCTGGGGCCTTATTACAGAG +
Preference number: 1 (lower is better)
Translates to: DKSSLKGPEQQLRCL*YPVLGVQTWGLITE
Trigger: CTCTGTAATAAGGCCCCAGGTTTGCACTCCCAAGACAGGATACCAAAGGCATCTCAGCTGCTGTTCTGGGCCCTTTAAAGAGCTTTTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR CCA 90 bp GCCACACTCCCCTTTCTGCACTGGGAGAGAAATAACTCTTACACCTaGGGTGATGATGTACTGCAGTTCCTAATTTCTTCCCTCCTTCCT +
Preference number: 1 (lower is better)
Translates to: ATLPFLHWERNNSYT*GDDVLQFLISSLLP
Trigger: AGGAAGGAGGGAAGAAATTAGGAACTGCAGTACATCATCACCCCAGGTGTAAGAGTTATTTCTCTCCCAGTGCAGAAAGGGGAGTGTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR GCA 90 bp TTGGAAGATAAAAGCTCTTTAAAGGGCCCAGAACAGCAGCTGAGATaGCTTTGGTATCCTGTCTTGGGAGTGCAAACCTGGGGCCTTATT +
Preference number: 1 (lower is better)
Translates to: LEDKSSLKGPEQQLR*LWYPVLGVQTWGLI
Trigger: AATAAGGCCCCAGGTTTGCACTCCCAAGACAGGATACCAAAGGCATCTCAGCTGCTGTTCTGGGCCCTTTAAAGAGCTTTTATCTTCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR CCA 90 bp AGTACTCTTGGAGGTGTGGACATGATATCAACAGTTTTAGTGGTCTaGGGTGTATTTGCTGCCACCCAAGCCAGCACTAGTCTGTGTTTG +
Preference number: 1 (lower is better)
Translates to: STLGGVDMISTVLVV*GVFAATQASTSLCL
Trigger: CAAACACAGACTAGTGCTGGCTTGGGTGGCAGCAAATACACCCCAGACCACTAAAACTGTTGATATCATGTCCACACCTCCAAGAGTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR CCA 90 bp AGACCCAACCCTCACACATATACATACCATGTGGATTTTCTTCTTTaGAGTGACTATAGGATTGGAAAGTCAGGGATCAGGCCAGCAAGC +
Preference number: 1 (lower is better)
Translates to: RPNPHTYTYHVDFLL*SDYRIGKSGIRPAS
Trigger: GCTTGCTGGCCTGATCCCTGACTTTCCAATCCTATAGTCACTCCAAAGAAGAAAATCCACATGGTATGTATATGTGTGAGGGTTGGGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR CCA 90 bp TCCCACCTCTCAATAGACCCAACCCTCACACATATACATACCATGTaGATTTTCTTCTTTGGAGTGACTATAGGATTGGAAAGTCAGGGA +
Preference number: 1 (lower is better)
Translates to: SHLSIDPTLTHIHTM*IFFFGVTIGLESQG
Trigger: TCCCTGACTTTCCAATCCTATAGTCACTCCAAAGAAGAAAATCCACATGGTATGTATATGTGTGAGGGTTGGGTCTATTGAGAGGTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR-3UTR CCA 90 bp GGAGAAGAGGAAGCTCAGGTACAGCCAGGGGCCACACTCCCCTTTCTGCACTGGCTGGCATCCTGGCCCTaGGAGAGGCCTACTAGGTGG +
Preference number: 2 (lower is better)
Translates to: GEEEAQVQPGATLPFLHWLASWP*ERPTRW
Trigger: CCACCTAGTAGGCCTCTCCCAGGGCCAGGATGCCAG...CCAGTGCAGAAAGGGGAGTGTGGCCCCTGGCTGTACCTGAGCTTCCTCTTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR-3UTR TCA 90 bp GGATGGAGAAGAGGAAGCTCAGGTACAGCCAGGGGCCACACTCCCCTTTCTGCAAGTACCATCCACGTGTaGGCTGGAGCAGGGCAGGGG +
Preference number: 2 (lower is better)
Translates to: GWRRGSSGTARGHTPLSASTIHV*AGAGQG
Trigger: CCCCTGCCCTGCTCCAGCTCACACGTGGATGGTACT...TGCAGAAAGGGGAGTGTGGCCCCTGGCTGTACCTGAGCTTCCTCTTCTCCATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR-3UTR CCA 90 bp GGATGGAGAAGAGGAAGCTCAGGTACAGCCAGGGGCCACACTCCCCTTTCTGCATCCCAGATAGGCTGGTaGCCCTTCTCCAGCAGGGTC +
Preference number: 2 (lower is better)
Translates to: GWRRGSSGTARGHTPLSASQIGW*PFSSRV
Trigger: GACCCTGCTGGAGAAGGGCCACCAGCCTATCTGGGA...TGCAGAAAGGGGAGTGTGGCCCCTGGCTGTACCTGAGCTTCCTCTTCTCCATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR-3UTR TCA 90 bp GGAGAAGAGGAAGCTCAGGTACAGCCAGGGGCCACACTCCCCTTTCTGCACTGGCACAGCGATAGGCTGTaGGACACACGCTACTTGATC +
Preference number: 2 (lower is better)
Translates to: GEEEAQVQPGATLPFLHWHSDRL*DTRYLI
Trigger: GATCAAGTAGCGTGTGTCTCACAGCCTATCGCTGTG...CCAGTGCAGAAAGGGGAGTGTGGCCCCTGGCTGTACCTGAGCTTCCTCTTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR-3UTR CCA 90 bp CTCAGCCCCAGGCCCTACTCTGTGGTGTGTGACCTTCCAAAGCCCAACAAAGTGACCGCCTGCTGTGGCTaGCACAGTCCACATGTAGAC +
Preference number: 2 (lower is better)
Translates to: LSPRPYSVVCDLPKPNKVTACCG*HSPHVD
Trigger: GTCTACATGTGGACTGTGCCAGCCACAGCAGGCGGT...CACTTTGTTGGGCTTTGGAAGGTCACACACCACAGAGTAGGGCCTGGGGCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR-3UTR TCA 90 bp GGAGAAGAGGAAGCTCAGGTACAGCCAGGGGCCACACTCCCCTTTCTGCACTGGCTACTCTGTGGTGTGTaGCCTTCCAAAGCCCAACAA +
Preference number: 2 (lower is better)
Translates to: GEEEAQVQPGATLPFLHWLLCGV*PSKAQQ
Trigger: TTGTTGGGCTTTGGAAGGTCACACACCACAGAGTAG...CCAGTGCAGAAAGGGGAGTGTGGCCCCTGGCTGTACCTGAGCTTCCTCTTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR-3UTR CCA 90 bp CTGGTGTTTACTGAACCCATTATCCGGGCAGTCTTGTGGCCTGGTACCCAAGCTCAGGCATGGAGATGGTaGGATGTGAGGGCGAGGGTG +
Preference number: 2 (lower is better)
Translates to: LVFTEPIIRAVLWPGTQAQAWRW*DVRARV
Trigger: CACCCTCGCCCTCACATCCCACCATCTCCATGCCTG...AGCTTGGGTACCAGGCCACAAGACTGCCCGGATAATGGGTTCAGTAAACACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR CAA 90 bp GTCTGGGGTGTATTTGCTGCCACCCAAGCCAGCACTAGTCTGTGTTaGGAAACAGGCCTGAAGCTTGGCTGGCTCTCCCAATGTCACCCT +
Preference number: 2 (lower is better)
Translates to: VWGVFAATQASTSLC*ETGLKLGWLSQCHP
Trigger: AGGGTGACATTGGGAGAGCCAGCCAAGCTTCAGGCCTGTTTCCAAACACAGACTAGTGCTGGCTTGGGTGGCAGCAAATACACCCCAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR-3UTR TCA 90 bp TGGGCACTTCTCTCTTGGAATGCTGTGCTTGGGGTAAGGAGGGCCTTCCTCACCCAGGTCTGCTATTTGTaGGTAAGGGCACTGGGCCAA +
Preference number: 2 (lower is better)
Translates to: WALLSWNAVLGVRRAFLTQVCYL*VRALGQ
Trigger: TTGGCCCAGTGCCCTTACTCACAAATAGCAGACCTG...GGTGAGGAAGGCCCTCCTTACCCCAAGCACAGCATTCCAAGAGAGAAGTGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR-3UTR GCA 90 bp TGGGCACTTCTCTCTTGGAATGCTGTGCTTGGGGTAAGGAGGGCCTTCCTCACCAAGCAAAAACTGGAGTaGAGTAGCAGCAGCAGCCTC +
Preference number: 2 (lower is better)
Translates to: WALLSWNAVLGVRRAFLTKQKLE*SSSSSL
Trigger: GAGGCTGCTGCTGCTACTGCACTCCAGTTTTTGCTT...GGTGAGGAAGGCCCTCCTTACCCCAAGCACAGCATTCCAAGAGAGAAGTGCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR-3UTR CCA 90 bp CTCAGCCCCAGGCCCTACTCTGTGGTGTGTGACCTTCCAAAGCCCAACAAAGTGATCCCAAACCCAGCGTaGGTCACAAGAAGAAACCTC +
Preference number: 2 (lower is better)
Translates to: LSPRPYSVVCDLPKPNKVIPNPA*VTRRNL
Trigger: GAGGTTTCTTCTTGTGACCCACGCTGGGTTTGGGAT...CACTTTGTTGGGCTTTGGAAGGTCACACACCACAGAGTAGGGCCTGGGGCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR-3UTR CCA 90 bp CTGGTGTTTACTGAACCCATTATCCGGGCAGTCTTGTGGCCTGGTACCCAAGCTCCAGGCCCTACTCTGTaGTGTGTGACCTTCCAAAGC +
Preference number: 2 (lower is better)
Translates to: LVFTEPIIRAVLWPGTQAPGPTL*CVTFQS
Trigger: GCTTTGGAAGGTCACACACCACAGAGTAGGGCCTGG...AGCTTGGGTACCAGGCCACAAGACTGCCCGGATAATGGGTTCAGTAAACACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR-3UTR CCA 90 bp GGAGAAGAGGAAGCTCAGGTACAGCCAGGGGCCACACTCCCCTTTCTGCACTGGCCAAAGCCTCTCTTCTaGGAAAATGTCACAATCAAC +
Preference number: 2 (lower is better)
Translates to: GEEEAQVQPGATLPFLHWPKPLF*ENVTIN
Trigger: GTTGATTGTGACATTTTCCCAGAAGAGAGGCTTTGG...CCAGTGCAGAAAGGGGAGTGTGGCCCCTGGCTGTACCTGAGCTTCCTCTTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR CAA 90 bp CAGAAAATGACAAGCTGTCTACCAGGTCCCACACGCCTGAGTCACTaGGCGTTTGTCTTCAGTACCTGGGCATCTTCTGCTGTCCCTATC +
Preference number: 2 (lower is better)
Translates to: QKMTSCLPGPTRLSH*AFVFSTWASSAVPI
Trigger: GATAGGGACAGCAGAAGATGCCCAGGTACTGAAGACAAACGCCAAGTGACTCAGGCGTGTGGGACCTGGTAGACAGCTTGTCATTTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR-3UTR TCA 90 bp CCCCAAGCGGGAGGCAATGCAGACTTGGCTGCTAATCAGTGGTTCATCATTCATCTGGGCAGATGCACTTaGGTTGAACGTGGCCATAGA +
Preference number: 2 (lower is better)
Translates to: PQAGGNADLAANQWFIIHLGRCT*VERGHR
Trigger: TCTATGGCCACGTTCAACTCAAGTGCATCTGCCCAG...ATGAATGATGAACCACTGATTAGCAGCCAAGTCTGCATTGCCTCCCGCTTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR-3UTR TCA 90 bp GGACATGATATCAACAGTTTTAGTGGTCTGGGGTGTATTTGCTGCCACCCAAGCGCCCCCATCTGGTCATaGTGCCAAAGTCCACAGCGA +
Preference number: 2 (lower is better)
Translates to: GHDINSFSGLGCICCHPSAPIWS*CQSPQR
Trigger: TCGCTGTGGACTTTGGCATCATGACCAGATGGGGGC...GCTTGGGTGGCAGCAAATACACCCCAGACCACTAAAACTGTTGATATCATGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR-3UTR TCA 90 bp TCCCCTTTCTGCACTGGGAGAGAAATAACTCTTACACCTGGGGTGATGATGTACCAGGTCCCACACGCCTaGGTCACTTGGCGTTTGTCT +
Preference number: 2 (lower is better)
Translates to: SPFCTGREITLTPGVMMYQVPHA*VTWRLS
Trigger: AGACAAACGCCAAGTGACTCAGGCGTGTGGGACCTG...GTACATCATCACCCCAGGTGTAAGAGTTATTTCTCTCCCAGTGCAGAAAGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR CAA 90 bp AGCTTTGGTAAGAGGCCAGAAAGTTGGAATTTGGGCACTTCTCTCTaGGAATGCTGTGCTTGGGGTAAGGAGGGCCTTCCTCACCCTCTT +
Preference number: 2 (lower is better)
Translates to: SFGKRPESWNLGTSL*ECCAWGKEGLPHPL
Trigger: AAGAGGGTGAGGAAGGCCCTCCTTACCCCAAGCACAGCATTCCAAGAGAGAAGTGCCCAAATTCCAACTTTCTGGCCTCTTACCAAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR-3UTR TCA 90 bp TCCCCTTTCTGCACTGGGAGAGAAATAACTCTTACACCTGGGGTGATGATGTACAGGCTGTCCAAACCATaGACTCTCACTCAGCCCCAG +
Preference number: 2 (lower is better)
Translates to: SPFCTGREITLTPGVMMYRLSKP*TLTQPQ
Trigger: CTGGGGCTGAGTGAGAGTTCATGGTTTGGACAGCCT...GTACATCATCACCCCAGGTGTAAGAGTTATTTCTCTCCCAGTGCAGAAAGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR-3UTR TCA 90 bp CACATGAGTACTCTCAGAGGGTCTAGACATGGGGAAGAAGGGTTCAAAAGAAAGGTTTGGAAACAGGCCTaGAGCTTGGCTGGCTCTCCC +
Preference number: 2 (lower is better)
Translates to: HMSTLRGSRHGEEGFKRKVWKQA*SLAGSP
Trigger: GGGAGAGCCAGCCAAGCTTCAGGCCTGTTTCCAAAC...CTTTCTTTTGAACCCTTCTTCCCCATGTCTAGACCCTCTGAGAGTACTCATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR-3UTR TCA 90 bp GGATGGAGAAGAGGAAGCTCAGGTACAGCCAGGGGCCACACTCCCCTTTCTGCATATTGGGTAATAAGATaGAGGCAGCTACTTCCACTA +
Preference number: 2 (lower is better)
Translates to: GWRRGSSGTARGHTPLSAYWVIR*RQLLPL
Trigger: TAGTGGAAGTAGCTGCCTTCATCTTATTACCCAATA...TGCAGAAAGGGGAGTGTGGCCCCTGGCTGTACCTGAGCTTCCTCTTCTCCATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR-3UTR GCA 90 bp GAGGCCAGAAAGTTGGAATTTGGGCACTTCTCTCTTGGAATGCTGTGCTTGGGGCAGGAGAAGGGAGGGTaGCATTCATTCCATAAAGGG +
Preference number: 2 (lower is better)
Translates to: EARKLEFGHFSLGMLCLGQEKGG*HSFHKG
Trigger: CCCTTTATGGAATGAATGGCACCCTCCCTTCTCCTG...CCCCAAGCACAGCATTCCAAGAGAGAAGTGCCCAAATTCCAACTTTCTGGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR-3UTR CCA 90 bp TCTGGGGTGTATTTGCTGCCACCCAAGCCAGCACTAGTCTGTGTTTGGAAACAGTGGGCACTTCTCTCTTaGAATGCTGTGCTTGGGGTA +
Preference number: 2 (lower is better)
Translates to: SGVYLLPPKPALVCVWKQWALLS*NAVLGV
Trigger: TACCCCAAGCACAGCATTCCAAGAGAGAAGTGCCCA...CTGTTTCCAAACACAGACTAGTGCTGGCTTGGGTGGCAGCAAATACACCCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR-3UTR TCA 90 bp AAGAAACCTCGAAAGCAAAAACTGGAGTGCAGTAGCAGCAGCAGCCTCCCTGGGGTGGGAAAACCAAGGTaGAAACTCACAGGAGTTTTC +
Preference number: 2 (lower is better)
Translates to: KKPRKQKLECSSSSSLPGVGKPR*KLTGVF
Trigger: GAAAACTCCTGTGAGTTTTCACCTTGGTTTTCCCAC...CCCAGGGAGGCTGCTGCTGCTACTGCACTCCAGTTTTTGCTTTCGAGGTTTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR-3UTR GCA 90 bp CACATGAGTACTCTCAGAGGGTCTAGACATGGGGAAGAAGGGTTCAAAAGAAAGTCAGGGCTATGCCAGTaGCCCTCAGAGACAATGCCT +
Preference number: 2 (lower is better)
Translates to: HMSTLRGSRHGEEGFKRKSGLCQ*PSETMP
Trigger: AGGCATTGTCTCTGAGGGGCACTGGCATAGCCCTGA...CTTTCTTTTGAACCCTTCTTCCCCATGTCTAGACCCTCTGAGAGTACTCATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR-3UTR GCA 90 bp TCCCCTTTCTGCACTGGGAGAGAAATAACTCTTACACCTGGGGTGATGATGTACACAGGTAAGGAAAGCTaGTGGCAGCAGGATGAAGGG +
Preference number: 2 (lower is better)
Translates to: SPFCTGREITLTPGVMMYTGKES*WQQDEG
Trigger: CCCTTCATCCTGCTGCCAGCAGCTTTCCTTACCTGT...GTACATCATCACCCCAGGTGTAAGAGTTATTTCTCTCCCAGTGCAGAAAGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR-3UTR CCA 90 bp GAGGCCAGAAAGTTGGAATTTGGGCACTTCTCTCTTGGAATGCTGTGCTTGGGGGAGCTCAACACTCTATaGCAGTGTCCACAACAGAAC +
Preference number: 2 (lower is better)
Translates to: EARKLEFGHFSLGMLCLGELNTL*QCPQQN
Trigger: GTTCTGTTGTGGACACTGCCATAGAGTGTTGAGCTC...CCCCAAGCACAGCATTCCAAGAGAGAAGTGCCCAAATTCCAACTTTCTGGCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR-3UTR TCA 90 bp CCCTTTCTTGCTGGCTGTGATAAATGGACCCTCATTTTCTATCTTTCCCCTACACTTCTGCCCAACCCCTaGTCCCCATTCACATGCTCA +
Preference number: 2 (lower is better)
Translates to: PFLAGCDKWTLIFYLSPTLLPNP*SPFTCS
Trigger: TGAGCATGTGAATGGGGATCAGGGGTTGGGCAGAAG...TGTAGGGGAAAGATAGAAAATGAGGGTCCATTTATCACAGCCAGCAAGAAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR-3UTR CCA 90 bp CACATGAGTACTCTCAGAGGGTCTAGACATGGGGAAGAAGGGTTCAAAAGAAAGTTTGGTATCCTGTCTTaGGAGTGCAAACCTGGGGCC +
Preference number: 2 (lower is better)
Translates to: HMSTLRGSRHGEEGFKRKFGILS*ECKPGA
Trigger: GGCCCCAGGTTTGCACTCCCAAGACAGGATACCAAA...CTTTCTTTTGAACCCTTCTTCCCCATGTCTAGACCCTCTGAGAGTACTCATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR-3UTR CCA 90 bp TCCCCTTTCTGCACTGGGAGAGAAATAACTCTTACACCTGGGGTGATGATGTACGAGAGGCCTACTAGGTaGCCTTCTCTATCCACATTC +
Preference number: 2 (lower is better)
Translates to: SPFCTGREITLTPGVMMYERPTR*PSLSTF
Trigger: GAATGTGGATAGAGAAGGCCACCTAGTAGGCCTCTC...GTACATCATCACCCCAGGTGTAAGAGTTATTTCTCTCCCAGTGCAGAAAGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR-3UTR CCA 90 bp TCCCCTTTCTGCACTGGGAGAGAAATAACTCTTACACCTGGGGTGATGATGTACCCCTTCCTTCCCCATTaGGTGGAGAATGTTCCCAAA +
Preference number: 2 (lower is better)
Translates to: SPFCTGREITLTPGVMMYPFLPH*VENVPK
Trigger: TTTGGGAACATTCTCCACCCAATGGGGAAGGAAGGG...GTACATCATCACCCCAGGTGTAAGAGTTATTTCTCTCCCAGTGCAGAAAGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR-3UTR GCA 90 bp GAGGCCAGAAAGTTGGAATTTGGGCACTTCTCTCTTGGAATGCTGTGCTTGGGGAGCCTGTGTCAAGGATaGATGCTATATATGTGTGTG +
Preference number: 2 (lower is better)
Translates to: EARKLEFGHFSLGMLCLGSLCQG*MLYMCV
Trigger: CACACACATATATAGCATGCATCCTTGACACAGGCT...CCCCAAGCACAGCATTCCAAGAGAGAAGTGCCCAAATTCCAACTTTCTGGCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR-3UTR GCA 90 bp CACATGAGTACTCTCAGAGGGTCTAGACATGGGGAAGAAGGGTTCAAAAGAAAGAAAGGAACCTGCTTCTaGAGCCACATATCCTGGCTG +
Preference number: 2 (lower is better)
Translates to: HMSTLRGSRHGEEGFKRKKGTCF*SHISWL
Trigger: CAGCCAGGATATGTGGCTGCAGAAGCAGGTTCCTTT...CTTTCTTTTGAACCCTTCTTCCCCATGTCTAGACCCTCTGAGAGTACTCATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR-3UTR TCA 90 bp CTATTGGGTAATAAGATGAAGGCAGCTACTTCCACTAAGTCCCATTTTCCCTTAGAGCTCAAGCTGCCCTaGAAGAAGAGGCAAGAGGTG +
Preference number: 2 (lower is better)
Translates to: LLGNKMKAATSTKSHFPLELKLP*KKRQEV
Trigger: CACCTCTTGCCTCTTCTTTCAGGGCAGCTTGAGCTC...TAAGGGAAAATGGGACTTAGTGGAAGTAGCTGCCTTCATCTTATTACCCAATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR CAA 90 bp TGTAAAAGGAACCCTCTCCTACAGGTGATTAATGAGAGGTTGAGCTaGGCAAGATTAGCCTGTTCCAATGTCTTCCTGACAGCAAGCTCT +
Preference number: 2 (lower is better)
Translates to: CKRNPLLQVINERLS*ARLACSNVFLTASS
Trigger: AGAGCTTGCTGTCAGGAAGACATTGGAACAGGCTAATCTTGCCAAGCTCAACCTCTCATTAATCACCTGTAGGAGAGGGTTCCTTTTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR CAA 90 bp TCATCTGGGAATTCTCAGGATCACAGCTGTCTGGCACTAGGCCTATaGGGTAATAAGATGAAGGCAGCTACTTCCACTAAGTCCCATTTT +
Preference number: 2 (lower is better)
Translates to: SSGNSQDHSCLALGL*GNKMKAATSTKSHF
Trigger: AAAATGGGACTTAGTGGAAGTAGCTGCCTTCATCTTATTACCCAATAGGCCTAGTGCCAGACAGCTGTGATCCTGAGAATTCCCAGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR-3UTR GCA 90 bp TCTGGGGTGTATTTGCTGCCACCCAAGCCAGCACTAGTCTGTGTTTGGAAACAGAAGCCTAATTTAGGTTaGTTCTCTTCCCTTATCTCA +
Preference number: 2 (lower is better)
Translates to: SGVYLLPPKPALVCVWKQKPNLG*FSSLIS
Trigger: TGAGATAAGGGAAGAGAAGCAACCTAAATTAGGCTT...CTGTTTCCAAACACAGACTAGTGCTGGCTTGGGTGGCAGCAAATACACCCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR CAA 90 bp AAGACATGTAAAAGGAACCCTCTCCTACAGGTGATTAATGAGAGGTaGAGCTTGGCAAGATTAGCCTGTTCCAATGTCTTCCTGACAGCA +
Preference number: 2 (lower is better)
Translates to: KTCKRNPLLQVINER*SLARLACSNVFLTA
Trigger: TGCTGTCAGGAAGACATTGGAACAGGCTAATCTTGCCAAGCTCAACCTCTCATTAATCACCTGTAGGAGAGGGTTCCTTTTACATGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR CAA 90 bp CATATACATACCATGTGGATTTTCTTCTTTGGAGTGACTATAGGATaGGAAAGTCAGGGATCAGGCCAGCAAGCCATCACCCTGAAAGTC +
Preference number: 2 (lower is better)
Translates to: HIHTMWIFFFGVTIG*ESQGSGQQAITLKV
Trigger: GACTTTCAGGGTGATGGCTTGCTGGCCTGATCCCTGACTTTCCAATCCTATAGTCACTCCAAAGAAGAAAATCCACATGGTATGTATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR-3UTR CCA 90 bp CCCTTTCTTGCTGGCTGTGATAAATGGACCCTCATTTTCTATCTTTCCCCTACATTGGCTGCTAATCAGTaGTTCATCATTCATTGGGGG +
Preference number: 2 (lower is better)
Translates to: PFLAGCDKWTLIFYLSPTLAANQ*FIIHWG
Trigger: CCCCCAATGAATGATGAACCACTGATTAGCAGCCAA...TGTAGGGGAAAGATAGAAAATGAGGGTCCATTTATCACAGCCAGCAAGAAAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR-3UTR CCA 90 bp TCCCCTTTCTGCACTGGGAGAGAAATAACTCTTACACCTGGGGTGATGATGTACCCCAAAATGCTCCTTTaGAGAAACTCAACAAGACAA +
Preference number: 2 (lower is better)
Translates to: SPFCTGREITLTPGVMMYPKMLL*RNSTRQ
Trigger: TTGTCTTGTTGAGTTTCTCCAAAGGAGCATTTTGGG...GTACATCATCACCCCAGGTGTAAGAGTTATTTCTCTCCCAGTGCAGAAAGGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR CAA 90 bp CCGGAGCTCAACACTCTATGGCAGTGTCCACAACAGAACCTTGTTTaGTCTTCTGTTTGCAAATGGATGAATTTTATCACTCCATCAAGG +
Preference number: 2 (lower is better)
Translates to: PELNTLWQCPQQNLV*SSVCKWMNFITPSR
Trigger: CCTTGATGGAGTGATAAAATTCATCCATTTGCAAACAGAAGACAAAACAAGGTTCTGTTGTGGACACTGCCATAGAGTGTTGAGCTCCGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR-3UTR TCA 90 bp CCAATAAAGACATGTAAAAGGAACCCTCTCCTACAGGTGATTAATGAGAGGTTGTTGTGTTGGGAGGCTTaGGAAGGGAGTTTTCCCTTT +
Preference number: 2 (lower is better)
Translates to: PIKTCKRNPLLQVINERLLCWEA*EGSFPF
Trigger: AAAGGGAAAACTCCCTTCTCAAGCCTCCCAACACAA...CAACCTCTCATTAATCACCTGTAGGAGAGGGTTCCTTTTACATGTCTTTATTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR-3UTR CCA 90 bp TCTGTTCCCAAGCTAAATTGCCATATCTCAGGAATGGCAAGAACCCTGTTGACTACCTTAAGCTCTGCATaGTCTGAAATCCCCTTTCTT +
Preference number: 2 (lower is better)
Translates to: SVPKLNCHISGMARTLLTTLSSA*SEIPFL
Trigger: AAGAAAGGGGATTTCAGACCATGCAGAGCTTAAGGT...AGTCAACAGGGTTCTTGCCATTCCTGAGATATGGCAATTTAGCTTGGGAACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR-3UTR TCA 90 bp TCTGTTCCCAAGCTAAATTGCCATATCTCAGGAATGGCAAGAACCCTGTTGACTGCAATAATCATAATTTaGGTGAACACAGCCAAGCAA +
Preference number: 2 (lower is better)
Translates to: SVPKLNCHISGMARTLLTAIIII*VNTAKQ
Trigger: TTGCTTGGCTGTGTTCACTCAAATTATGATTATTGC...AGTCAACAGGGTTCTTGCCATTCCTGAGATATGGCAATTTAGCTTGGGAACAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR CCA 72 bp TCCCAGATAGGCTGGTGGCCCTTCTCCAGCAGGGTCTaGAGGCTGGTGATGGCTCTACCGCCTGCTGTGGCT +
Preference number: 3 (lower is better)
Translates to: SQIGWWPFSSRV*RLVMALPPAVA
Trigger: AGCCACAGCAGGCGGTAGAGCCATCACCAGCCTCCAGACCCTGCTGGAGAAGGGCCACCAGCCTATCTGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR GCA 72 bp CAGCAGGGTCTGGAGGCTGGTGATGGCTCTACCGCCTaGTGTGGCTGGCACAGTCCACATGTAGACAGGAGC +
Preference number: 3 (lower is better)
Translates to: QQGLEAGDGSTA*CGWHSPHVDRS
Trigger: GCTCCTGTCTACATGTGGACTGTGCCAGCCACAGCAGGCGGTAGAGCCATCACCAGCCTCCAGACCCTGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR GCA 72 bp AGGTGGGGTGGTGGCACTGGCACAGGTAAGGAAAGCTaGTGGCAGCAGGATGAAGGGTACACACCCAGCCTC +
Preference number: 3 (lower is better)
Translates to: RWGGGTGTGKES*WQQDEGYTPSL
Trigger: GAGGCTGGGTGTGTACCCTTCATCCTGCTGCCAGCAGCTTTCCTTACCTGTGCCAGTGCCACCACCCCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR CCA 72 bp CTGGAGGCTGGTGATGGCTCTACCGCCTGCTGTGGCTaGCACAGTCCACATGTAGACAGGAGCTCAAGCTGC +
Preference number: 3 (lower is better)
Translates to: LEAGDGSTACCG*HSPHVDRSSSC
Trigger: GCAGCTTGAGCTCCTGTCTACATGTGGACTGTGCCAGCCACAGCAGGCGGTAGAGCCATCACCAGCCTCCAG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR CCA 72 bp TGGGGTGGTGGCACTGGCACAGGTAAGGAAAGCTGCTaGCAGCAGGATGAAGGGTACACACCCAGCCTCCTG +
Preference number: 3 (lower is better)
Translates to: WGGGTGTGKESC*QQDEGYTPSLL
Trigger: CAGGAGGCTGGGTGTGTACCCTTCATCCTGCTGCCAGCAGCTTTCCTTACCTGTGCCAGTGCCACCACCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR TCA 72 bp CATTATCCGGGCAGTCTTGTGGCCTGGTACCCAAGCTaGGGCCAGATAGGTAGGGCTGGCTTGAACTGGGCC +
Preference number: 3 (lower is better)
Translates to: HYPGSLVAWYPS*GQIGRAGLNWA
Trigger: GGCCCAGTTCAAGCCAGCCCTACCTATCTGGCCTCAGCTTGGGTACCAGGCCACAAGACTGCCCGGATAATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR-3UTR CAA 90 bp GGAGAAGAGGAAGCTCAGGTACAGCCAGGGGCCACACTCCCCTTTCTGCACTGGCTTTGGTATCCTGTCTaGGGAGTGCAAACCTGGGGC +
Preference number: 3 (lower is better)
Translates to: GEEEAQVQPGATLPFLHWLWYPV*GVQTWG
Trigger: GCCCCAGGTTTGCACTCCCAAGACAGGATACCAAAG...CCAGTGCAGAAAGGGGAGTGTGGCCCCTGGCTGTACCTGAGCTTCCTCTTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR-3UTR CAA 90 bp GGATGGAGAAGAGGAAGCTCAGGTACAGCCAGGGGCCACACTCCCCTTTCTGCATGGTCTGGGGTGTATTaGCTGCCACCCAAGCCAGCA +
Preference number: 3 (lower is better)
Translates to: GWRRGSSGTARGHTPLSAWSGVY*LPPKPA
Trigger: TGCTGGCTTGGGTGGCAGCAAATACACCCCAGACCA...TGCAGAAAGGGGAGTGTGGCCCCTGGCTGTACCTGAGCTTCCTCTTCTCCATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR-3UTR CAA 90 bp GGAGAAGAGGAAGCTCAGGTACAGCCAGGGGCCACACTCCCCTTTCTGCACTGGCCCCTTCCTTCCCCATaGGGTGGAGAATGTTCCCAA +
Preference number: 3 (lower is better)
Translates to: GEEEAQVQPGATLPFLHWPLPSP*GGECSQ
Trigger: TTGGGAACATTCTCCACCCAATGGGGAAGGAAGGGG...CCAGTGCAGAAAGGGGAGTGTGGCCCCTGGCTGTACCTGAGCTTCCTCTTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR-3UTR CAA 90 bp GGATGGAGAAGAGGAAGCTCAGGTACAGCCAGGGGCCACACTCCCCTTTCTGCAATTATCCGGGCAGTCTaGTGGCCTGGTACCCAAGCT +
Preference number: 3 (lower is better)
Translates to: GWRRGSSGTARGHTPLSAIIRAV*WPGTQA
Trigger: AGCTTGGGTACCAGGCCACAAGACTGCCCGGATAAT...TGCAGAAAGGGGAGTGTGGCCCCTGGCTGTACCTGAGCTTCCTCTTCTCCATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR CCA 72 bp TTGGCCACCTCCTTTTTCTCTTCCCAGATAGGCTGGTaGCCCTTCTCCAGCAGGGTCTGGAGGCTGGTGATG +
Preference number: 3 (lower is better)
Translates to: LATSFFSSQIGW*PFSSRVWRLVM
Trigger: CATCACCAGCCTCCAGACCCTGCTGGAGAAGGGCCACCAGCCTATCTGGGAAGAGAAAAAGGAGGTGGCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR GCA 72 bp GAGAGGGGAAAGAGGGAGGGCCCTAGGCAGTTGAGATaGCAGCCCTCTGCACAAGCAGCAGCAATTTTTGTG +
Preference number: 3 (lower is better)
Translates to: ERGKREGPRQLR*QPSAQAAAIFV
Trigger: CACAAAAATTGCTGCTGCTTGTGCAGAGGGCTGGCATCTCAACTGCCTAGGGCCCTCCCTCTTTCCCCTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR TCA 72 bp ACTCTCACTCAGCCCCAGGCCCTACTCTGTGGTGTGTaGCCTTCCAAAGCCCAACAAAGTGTGTCAGGGCTA +
Preference number: 3 (lower is better)
Translates to: TLTQPQALLCGV*PSKAQQSVSGL
Trigger: TAGCCCTGACACACTTTGTTGGGCTTTGGAAGGTCACACACCACAGAGTAGGGCCTGGGGCTGAGTGAGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR CCA 72 bp TCTTCAGTACCTGGGCATCTTCTGCTGTCCCTATCATaGGGGGAGGGAACGGACAGTGTGGTACAGCTAAGG +
Preference number: 3 (lower is better)
Translates to: SSVPGHLLLSLS*GEGTDSVVQLR
Trigger: CCTTAGCTGTACCACACTGTCCGTTCCCTCCCCCCATGATAGGGACAGCAGAAGATGCCCAGGTACTGAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR-3UTR CAA 90 bp GGATGGAGAAGAGGAAGCTCAGGTACAGCCAGGGGCCACACTCCCCTTTCTGCAATAGTGCAAGCATCATaGTCATCTGTCTCCCACAGC +
Preference number: 3 (lower is better)
Translates to: GWRRGSSGTARGHTPLSAIVQAS*SSVSHS
Trigger: GCTGTGGGAGACAGATGACAATGATGCTTGCACTAT...TGCAGAAAGGGGAGTGTGGCCCCTGGCTGTACCTGAGCTTCCTCTTCTCCATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR GCA 72 bp ATAGGTAGGGCTGGCTTGAACTGGGCCCCAAGGCAGTaGTTCCTTGGAGACTCTAAAGCACCAAGAAACTGG +
Preference number: 3 (lower is better)
Translates to: IGRAGLNWAPRQ*FLGDSKAPRNW
Trigger: CCAGTTTCTTGGTGCTTTAGAGTCTCCAAGGAAGCACTGCCTTGGGGCCCAGTTCAAGCCAGCCCTACCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR GCA 72 bp ACCAGCATGGACACATCCCCTGGCCAAGAAACAGTTTaGCCACAAAGTCACCTTGACTTAGGGGGCAAACAG +
Preference number: 3 (lower is better)
Translates to: TSMDTSPGQETV*PQSHLDLGGKQ
Trigger: CTGTTTGCCCCCTAAGTCAAGGTGACTTTGTGGGCAAACTGTTTCTTGGCCAGGGGATGTGTCCATGCTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR CCA 72 bp ACTAGTCTGTGTTTGGAAACAGGCCTGAAGCTTGGCTaGCTCTCCCAATGTCACCCTGTGCTGTCAACACCA +
Preference number: 3 (lower is better)
Translates to: TSLCLETGLKLG*LSQCHPVLSTP
Trigger: TGGTGTTGACAGCACAGGGTGACATTGGGAGAGCCAGCCAAGCTTCAGGCCTGTTTCCAAACACAGACTAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR-3UTR CAA 90 bp GGAGAAGAGGAAGCTCAGGTACAGCCAGGGGCCACACTCCCCTTTCTGCACTGGAGGGGATTAGCATTTTaGTCTTTAACCCAAGCTATG +
Preference number: 3 (lower is better)
Translates to: GEEEAQVQPGATLPFLHWRGLAF*SLTQAM
Trigger: CATAGCTTGGGTTAAAGACAAAAATGCTAATCCCCT...CCAGTGCAGAAAGGGGAGTGTGGCCCCTGGCTGTACCTGAGCTTCCTCTTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR-3UTR CAA 90 bp CTGGTGTTTACTGAACCCATTATCCGGGCAGTCTTGTGGCCTGGTACCCAAGCTCATCCCAGAGCAGCTTaGGTAAGAGGCCAGAAAGTT +
Preference number: 3 (lower is better)
Translates to: LVFTEPIIRAVLWPGTQAHPRAA*VRGQKV
Trigger: AACTTTCTGGCCTCTTACCAAAGCTGCTCTGGGATG...AGCTTGGGTACCAGGCCACAAGACTGCCCGGATAATGGGTTCAGTAAACACCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR-3UTR CAA 90 bp CTGGTGTTTACTGAACCCATTATCCGGGCAGTCTTGTGGCCTGGTACCCAAGCTAAGAAGCCCTGTCATTaGATGATGCTAAGGACTCGG +
Preference number: 3 (lower is better)
Translates to: LVFTEPIIRAVLWPGTQAKKPCH*MMLRTR
Trigger: CCGAGTCCTTAGCATCATCAAATGACAGGGCTTCTT...AGCTTGGGTACCAGGCCACAAGACTGCCCGGATAATGGGTTCAGTAAACACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR TCA 72 bp TCTGGTCATGATGCCAAAGTCCACAGCGATAGGCTGTaGGACACACGCTACTTGATCCTCTCTAAGGACAGC +
Preference number: 3 (lower is better)
Translates to: SGHDAKVHSDRL*DTRYLILSKDS
Trigger: GCTGTCCTTAGAGAGGATCAAGTAGCGTGTGTCTCACAGCCTATCGCTGTGGACTTTGGCATCATGACCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR TCA 72 bp CCCTGGCCAAGAAACAGTTTGCCCACAAAGTCACCTTaGCTTAGGGGGCAAACAGCATCTGTTCCCAAGCTA +
Preference number: 3 (lower is better)
Translates to: PWPRNSLPTKSP*LRGQTASVPKL
Trigger: TAGCTTGGGAACAGATGCTGTTTGCCCCCTAAGTCAAGGTGACTTTGTGGGCAAACTGTTTCTTGGCCAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR GCA 72 bp AGGGAGGGTGCCATTCATTCCATAAAGGGCTGCAACTaGCAAGAAGCCCTGTCATTTGATGATGCTAAGGAC +
Preference number: 3 (lower is better)
Translates to: REGAIHSIKGCN*QEALSFDDAKD
Trigger: GTCCTTAGCATCATCAAATGACAGGGCTTCTTGGCAGTTGCAGCCCTTTATGGAATGAATGGCACCCTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR GCA 72 bp TTAGTGCCATGCAAATTCATGTGGTGCTTCCAGGGGTaGAGCTTCTACCAGCCAGGTCTGCTATTTGTGAGT +
Preference number: 3 (lower is better)
Translates to: LVPCKFMWCFQG*SFYQPGLLFVS
Trigger: ACTCACAAATAGCAGACCTGGCTGGTAGAAGCTGCACCCCTGGAAGCACCACATGAATTTGCATGGCACTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR GCA 72 bp CCTCCCCTAGGCTGCCATTGGGTTTCAGCCACAAACTaGTTAGCTCTAGAAATTCAAAGGAACCTGCTTCTG +
Preference number: 3 (lower is better)
Translates to: PPLGCHWVSATN*LALEIQRNLLL
Trigger: CAGAAGCAGGTTCCTTTGAATTTCTAGAGCTAAGCAGTTTGTGGCTGAAACCCAATGGCAGCCTAGGGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR CCA 72 bp GGAGGTGTGGACATGATATCAACAGTTTTAGTGGTCTaGGGTGTATTTGCTGCCACCCAAGCCAGCACTAGT +
Preference number: 3 (lower is better)
Translates to: GGVDMISTVLVV*GVFAATQASTS
Trigger: ACTAGTGCTGGCTTGGGTGGCAGCAAATACACCCCAGACCACTAAAACTGTTGATATCATGTCCACACCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR CCA 72 bp TCCCTTCTTGGCATAGGACTAAGGAGGGAGAGAGACTaGTGTTTACTGAACCCATTATCCGGGCAGTCTTGT +
Preference number: 3 (lower is better)
Translates to: SLLGIGLRRERD*CLLNPLSGQSC
Trigger: ACAAGACTGCCCGGATAATGGGTTCAGTAAACACCAGTCTCTCTCCCTCCTTAGTCCTATGCCAAGAAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR-3UTR CAA 90 bp GAGGCCAGAAAGTTGGAATTTGGGCACTTCTCTCTTGGAATGCTGTGCTTGGGGTGTTCCCAAGCTAAATaGCCATATCTCAGGAATGGC +
Preference number: 3 (lower is better)
Translates to: EARKLEFGHFSLGMLCLGCSQAK*PYLRNG
Trigger: GCCATTCCTGAGATATGGCAATTTAGCTTGGGAACA...CCCCAAGCACAGCATTCCAAGAGAGAAGTGCCCAAATTCCAACTTTCTGGCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR GCA 72 bp AACATGAAAACTGCATGGATGCAGGAGAAGGGAGGGTaGCATTCATTCCATAAAGGGCTGCAACTGCCAAGA +
Preference number: 3 (lower is better)
Translates to: NMKTAWMQEKGG*HSFHKGLQLPR
Trigger: TCTTGGCAGTTGCAGCCCTTTATGGAATGAATGGCACCCTCCCTTCTCCTGCATCCATGCAGTTTTCATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR CCA 72 bp AACCTGGGGCCTTATTACAGAGTCCAAATGATGGGATaGGCAAGGCTTAAGGAACATTTTGTGTTGGGAGGC +
Preference number: 3 (lower is better)
Translates to: NLGPYYRVQMMG*ARLKEHFVLGG
Trigger: GCCTCCCAACACAAAATGTTCCTTAAGCCTTGCCCATCCCATCATTTGGACTCTGTAATAAGGCCCCAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR-3UTR CAA 90 bp TCTGTTCCCAAGCTAAATTGCCATATCTCAGGAATGGCAAGAACCCTGTTGACTGCAGATGCACTTGAGTaGAACGTGGCCATAGATGGC +
Preference number: 3 (lower is better)
Translates to: SVPKLNCHISGMARTLLTADALE*NVAIDG
Trigger: GCCATCTATGGCCACGTTCAACTCAAGTGCATCTGC...AGTCAACAGGGTTCTTGCCATTCCTGAGATATGGCAATTTAGCTTGGGAACAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR-3UTR CAA 90 bp GAGGCCAGAAAGTTGGAATTTGGGCACTTCTCTCTTGGAATGCTGTGCTTGGGGGTCCACAACAGAACCTaGTTTTGTCTTCTGTTTGCA +
Preference number: 3 (lower is better)
Translates to: EARKLEFGHFSLGMLCLGVHNRT*FCLLFA
Trigger: TGCAAACAGAAGACAAAACAAGGTTCTGTTGTGGAC...CCCCAAGCACAGCATTCCAAGAGAGAAGTGCCCAAATTCCAACTTTCTGGCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR-3UTR CAA 90 bp TCCCCTTTCTGCACTGGGAGAGAAATAACTCTTACACCTGGGGTGATGATGTACCTGGCACTAGGCCTATaGGGTAATAAGATGAAGGCA +
Preference number: 3 (lower is better)
Translates to: SPFCTGREITLTPGVMMYLALGL*GNKMKA
Trigger: TGCCTTCATCTTATTACCCAATAGGCCTAGTGCCAG...GTACATCATCACCCCAGGTGTAAGAGTTATTTCTCTCCCAGTGCAGAAAGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR TCA 72 bp GGAGTGCAAACCTGGGGCCTTATTACAGAGTCCAAATaGTGGGATGGGCAAGGCTTAAGGAACATTTTGTGT +
Preference number: 3 (lower is better)
Translates to: GVQTWGLITESK*WDGQGLRNILC
Trigger: ACACAAAATGTTCCTTAAGCCTTGCCCATCCCATCATTTGGACTCTGTAATAAGGCCCCAGGTTTGCACTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR TCA 72 bp CCAAAGCCTCTCTTCTGGGAAAATGTCACAATCAACTaGGCTCCTAGGAAGTCCTATGCAAGGGTTTCCTCA +
Preference number: 3 (lower is better)
Translates to: PKPLFWENVTIN*APRKSYARVSS
Trigger: TGAGGAAACCCTTGCATAGGACTTCCTAGGAGCTCAGTTGATTGTGACATTTTCCCAGAAGAGAGGCTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR-3UTR CAA 90 bp CAGGTGATTAATGAGAGGTTGAGCTTGGCAAGATTAGCCTGTTCCAATGTCTTCTCACAGGAGTTTTCCTaGGCCCAAAGGGTTTTCAAG +
Preference number: 3 (lower is better)
Translates to: QVINERLSLARLACSNVFSQEFS*AQRVFK
Trigger: CTTGAAAACCCTTTGGGCCAAGGAAAACTCCTGTGA...GAAGACATTGGAACAGGCTAATCTTGCCAAGCTCAACCTCTCATTAATCACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR TCA 72 bp AAGAGGTGGGTTCTTCCCTGTTGTAAAGGCATTTGGTaGGTGTTTACTTCCTGCCAAATAGCCAGGCCAATT +
Preference number: 3 (lower is better)
Translates to: KRWVLPCCKGIW*VFTSCQIARPI
Trigger: AATTGGCCTGGCTATTTGGCAGGAAGTAAACACTCACCAAATGCCTTTACAACAGGGAAGAACCCACCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR CCA 72 bp CCCTTTCTGCACTGGGAGAGAAATAACTCTTACACCTaGGGTGATGATGTACTGCAGTTCCTAATTTCTTCC +
Preference number: 3 (lower is better)
Translates to: PFLHWERNNSYT*GDDVLQFLISS
Trigger: GGAAGAAATTAGGAACTGCAGTACATCATCACCCCAGGTGTAAGAGTTATTTCTCTCCCAGTGCAGAAAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR-3UTR CAA 90 bp CCAATAAAGACATGTAAAAGGAACCCTCTCCTACAGGTGATTAATGAGAGGTTGAAGGAACATTTTGTGTaGGGAGGCTTGAGAAGGGAG +
Preference number: 3 (lower is better)
Translates to: PIKTCKRNPLLQVINERLKEHFV*GGLRRE
Trigger: CTCCCTTCTCAAGCCTCCCAACACAAAATGTTCCTT...CAACCTCTCATTAATCACCTGTAGGAGAGGGTTCCTTTTACATGTCTTTATTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR GCA 72 bp TTAGCCTGTGTCAAGGATGCATGCTATATATGTGTGTaGATGTGTGTTTGTGTGTGTGTGTGTATGTATGTG +
Preference number: 3 (lower is better)
Translates to: LACVKDACYICV*MCVCVCVCMYV
Trigger: CACATACATACACACACACACACAAACACACATGCACACACATATATAGCATGCATCCTTGACACAGGCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR CCA 72 bp CCTCACACATATACATACCATGTGGATTTTCTTCTTTaGAGTGACTATAGGATTGGAAAGTCAGGGATCAGG +
Preference number: 3 (lower is better)
Translates to: PHTYTYHVDFLL*SDYRIGKSGIR
Trigger: CCTGATCCCTGACTTTCCAATCCTATAGTCACTCCAAAGAAGAAAATCCACATGGTATGTATATGTGTGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR-3UTR CAA 90 bp CTATTGGGTAATAAGATGAAGGCAGCTACTTCCACTAAGTCCCATTTTCCCTTATATATAATCACTAACTaGGCAACTGGAATAGGCACA +
Preference number: 3 (lower is better)
Translates to: LLGNKMKAATSTKSHFPLYIITN*ATGIGT
Trigger: TGTGCCTATTCCAGTTGCCAAGTTAGTGATTATATA...TAAGGGAAAATGGGACTTAGTGGAAGTAGCTGCCTTCATCTTATTACCCAATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR CCA 72 bp TCAATAGACCCAACCCTCACACATATACATACCATGTaGATTTTCTTCTTTGGAGTGACTATAGGATTGGAA +
Preference number: 3 (lower is better)
Translates to: SIDPTLTHIHTM*IFFFGVTIGLE
Trigger: TTCCAATCCTATAGTCACTCCAAAGAAGAAAATCCACATGGTATGTATATGTGTGAGGGTTGGGTCTATTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp GGAGAAGAGGAAGCTCAGGTACAGCCAGGGGCCACACTCCCCTTTCTGCACTGGCGGGCACGTGCCTCCTaGGCCTCAAGCTGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: GEEEAQVQPGATLPFLHWRARAS*ASSCSR
Trigger: GCGGGAGCAGCTTGAGGCCCAGGAGGCACGTGCCCG...CCAGTGCAGAAAGGGGAGTGTGGCCCCTGGCTGTACCTGAGCTTCCTCTTCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR TCA 90 bp GGAGAAGAGGAAGCTCAGGTACAGCCAGGGGCCACACTCCCCTTTCTGCACTGGTCAAAGCAGGGCACCTaGGGGGCTGAGCTCACGTGC +
Preference number: 4 (lower is better)
Translates to: GEEEAQVQPGATLPFLHWSKQGT*GAELTC
Trigger: GCACGTGAGCTCAGCCCCTCAGGTGCCCTGCTTTGA...CCAGTGCAGAAAGGGGAGTGTGGCCCCTGGCTGTACCTGAGCTTCCTCTTCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR GCA 90 bp TGGGCACTTCTCTCTTGGAATGCTGTGCTTGGGGTAAGGAGGGCCTTCCTCACCGAGGCCTGGCCCTCATaGTCTGGGAGGCCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: WALLSWNAVLGVRRAFLTEAWPS*SGRPVA
Trigger: AGCCACAGGCCTCCCAGAGCATGAGGGCCAGGCCTC...GGTGAGGAAGGCCCTCCTTACCCCAAGCACAGCATTCCAAGAGAGAAGTGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp GGAGAAGAGGAAGCTCAGGTACAGCCAGGGGCCACACTCCCCTTTCTGCACTGGAAGGCCCATAGTGAGTaGGCTGAGGCTGGGGGTGCT +
Preference number: 4 (lower is better)
Translates to: GEEEAQVQPGATLPFLHWKAHSE*AEAGGA
Trigger: AGCACCCCCAGCCTCAGCCCACTCACTATGGGCCTT...CCAGTGCAGAAAGGGGAGTGTGGCCCCTGGCTGTACCTGAGCTTCCTCTTCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR TCA 90 bp TGGGCACTTCTCTCTTGGAATGCTGTGCTTGGGGTAAGGAGGGCCTTCCTCACCGGGTTGCACATGTGCTaGGGCACAGGCCTCCATGGG +
Preference number: 4 (lower is better)
Translates to: WALLSWNAVLGVRRAFLTGLHMC*GTGLHG
Trigger: CCCATGGAGGCCTGTGCCTCAGCACATGTGCAACCC...GGTGAGGAAGGCCCTCCTTACCCCAAGCACAGCATTCCAAGAGAGAAGTGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp CTCAGCCCCAGGCCCTACTCTGTGGTGTGTGACCTTCCAAAGCCCAACAAAGTGGCTCAGGCCGGACCCTaGGCAGCTGAGGAATGCCAT +
Preference number: 4 (lower is better)
Translates to: LSPRPYSVVCDLPKPNKVAQAGP*AAEECH
Trigger: ATGGCATTCCTCAGCTGCCCAGGGTCCGGCCTGAGC...CACTTTGTTGGGCTTTGGAAGGTCACACACCACAGAGTAGGGCCTGGGGCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR TCA 90 bp CTTGCTGGCTGTGATAAATGGACCCTCATTTTCTATCTTTCCCCTACACTCCACCTCGGCTGCCACGGCTaGGAGCGCCGCCACCGCAGC +
Preference number: 4 (lower is better)
Translates to: LAGCDKWTLIFYLSPTLHLGCHG*ERRHRS
Trigger: GCTGCGGTGGCGGCGCTCTCAGCCGTGGCAGCCGAG...GTGGAGTGTAGGGGAAAGATAGAAAATGAGGGTCCATTTATCACAGCCAGCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR TCA 90 bp CTGGTGTTTACTGAACCCATTATCCGGGCAGTCTTGTGGCCTGGTACCCAAGCTCTGGCCTCCCTGCCATaGGCTTCCCAAGTGTGGGCC +
Preference number: 4 (lower is better)
Translates to: LVFTEPIIRAVLWPGTQALASLP*ASQVWA
Trigger: GGCCCACACTTGGGAAGCTCATGGCAGGGAGGCCAG...AGCTTGGGTACCAGGCCACAAGACTGCCCGGATAATGGGTTCAGTAAACACCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR TCA 90 bp GGAGAAGAGGAAGCTCAGGTACAGCCAGGGGCCACACTCCCCTTTCTGCACTGGAAGCAGCAAGAGGGGTaGAGGAGTTCCCCAAAGCCT +
Preference number: 4 (lower is better)
Translates to: GEEEAQVQPGATLPFLHWKQQEG*RSSPKP
Trigger: AGGCTTTGGGGAACTCCTTCACCCCTCTTGCTGCTT...CCAGTGCAGAAAGGGGAGTGTGGCCCCTGGCTGTACCTGAGCTTCCTCTTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR GCA 90 bp GGATGGAGAAGAGGAAGCTCAGGTACAGCCAGGGGCCACACTCCCCTTTCTGCAGGGTTCTGGCCTCCCTaGCATGAGCTTCCCAAGTGT +
Preference number: 4 (lower is better)
Translates to: GWRRGSSGTARGHTPLSAGFWPP*HELPKC
Trigger: ACACTTGGGAAGCTCATGGCAGGGAGGCCAGAACCC...TGCAGAAAGGGGAGTGTGGCCCCTGGCTGTACCTGAGCTTCCTCTTCTCCATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp GGAGAAGAGGAAGCTCAGGTACAGCCAGGGGCCACACTCCCCTTTCTGCACTGGGGCAGGAACTTCGCTTaGTCCCATCTCGGTTTGCTC +
Preference number: 4 (lower is better)
Translates to: GEEEAQVQPGATLPFLHWGRNFA*SHLGLL
Trigger: GAGCAAACCGAGATGGGACCAAGCGAAGTTCCTGCC...CCAGTGCAGAAAGGGGAGTGTGGCCCCTGGCTGTACCTGAGCTTCCTCTTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp GGATGGAGAAGAGGAAGCTCAGGTACAGCCAGGGGCCACACTCCCCTTTCTGCATGCAGCCACATATCCTaGCTGCCCCACTTCAGGTGG +
Preference number: 4 (lower is better)
Translates to: GWRRGSSGTARGHTPLSACSHIS*LPHFRW
Trigger: CCACCTGAAGTGGGGCAGCCAGGATATGTGGCTGCA...TGCAGAAAGGGGAGTGTGGCCCCTGGCTGTACCTGAGCTTCCTCTTCTCCATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR TCA 90 bp GGACATGATATCAACAGTTTTAGTGGTCTGGGGTGTATTTGCTGCCACCCAAGCCCGGTTATTGTCCGCTaGGCCGCCCTGGGCCGGGCT +
Preference number: 4 (lower is better)
Translates to: GHDINSFSGLGCICCHPSPVIVR*AALGRA
Trigger: AGCCCGGCCCAGGGCGGCTCAGCGGACAATAACCGG...GCTTGGGTGGCAGCAAATACACCCCAGACCACTAAAACTGTTGATATCATGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR TCA 90 bp GGAGAAGAGGAAGCTCAGGTACAGCCAGGGGCCACACTCCCCTTTCTGCACTGGTGGGTCTCTCGGACTTaGGTCTCTCTACAACGAACC +
Preference number: 4 (lower is better)
Translates to: GEEEAQVQPGATLPFLHWWVSRT*VSLQRT
Trigger: GGTTCGTTGTAGAGAGACTCAAGTCCGAGAGACCCA...CCAGTGCAGAAAGGGGAGTGTGGCCCCTGGCTGTACCTGAGCTTCCTCTTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR TCA 90 bp CCCCAAGCGGGAGGCAATGCAGACTTGGCTGCTAATCAGTGGTTCATCATTCATGGGTCTGGAGGCTGGTaGTGGCTCTACCGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: PQAGGNADLAANQWFIIHGSGGW*WLYRLL
Trigger: CAGCAGGCGGTAGAGCCATCACCAGCCTCCAGACCC...ATGAATGATGAACCACTGATTAGCAGCCAAGTCTGCATTGCCTCCCGCTTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR GCA 90 bp TGGGCACTTCTCTCTTGGAATGCTGTGCTTGGGGTAAGGAGGGCCTTCCTCACCACGTCCAGCTGGAAATaGAGCCTCAGGCTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: WALLSWNAVLGVRRAFLTTSSWK*SLRLPG
Trigger: GCCTGGAAGCCTGAGGCTGCATTTCCAGCTGGACGT...GGTGAGGAAGGCCCTCCTTACCCCAAGCACAGCATTCCAAGAGAGAAGTGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR GCA 90 bp GCAGACTTGGCTGCTAATCAGTGGTTCATCATTCATTGGGGGAAAGGGGCAGGGGGTACTCCCAGAGGCTaGAGCTCCCTTGGCCTGAGC +
Preference number: 4 (lower is better)
Translates to: ADLAANQWFIIHWGKGAGGTPRG*SSLGLS
Trigger: GCTCAGGCCAAGGGAGCTGCAGCCTCTGGGAGTACC...CCCTGCCCCTTTCCCCCAATGAATGATGAACCACTGATTAGCAGCCAAGTCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR GCA 90 bp GGAGAAGAGGAAGCTCAGGTACAGCCAGGGGCCACACTCCCCTTTCTGCACTGGCTTTCCCAGAACCTTTaGTCCGTCCCCCTCCAAAGA +
Preference number: 4 (lower is better)
Translates to: GEEEAQVQPGATLPFLHWLSQNL*SVPLQR
Trigger: TCTTTGGAGGGGGACGGAGCAAAGGTTCTGGGAAAG...CCAGTGCAGAAAGGGGAGTGTGGCCCCTGGCTGTACCTGAGCTTCCTCTTCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR GCA 90 bp CTCAGCCCCAGGCCCTACTCTGTGGTGTGTGACCTTCCAAAGCCCAACAAAGTGTGGTGCTTCCAGGGGTaGAGCTTCTACCAGCCAGGT +
Preference number: 4 (lower is better)
Translates to: LSPRPYSVVCDLPKPNKVWCFQG*SFYQPG
Trigger: ACCTGGCTGGTAGAAGCTGCACCCCTGGAAGCACCA...CACTTTGTTGGGCTTTGGAAGGTCACACACCACAGAGTAGGGCCTGGGGCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp AAGAAACCTCGAAAGCAAAAACTGGAGTGCAGTAGCAGCAGCAGCCTCCCTGGGAGGACCTGGCCCCACTaGAAGAGGACAGGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: KKPRKQKLECSSSSSLPGRTWPH*KRTGSP
Trigger: TGGGCTCCCTGTCCTCTTCCAGTGGGGCCAGGTCCT...CCCAGGGAGGCTGCTGCTGCTACTGCACTCCAGTTTTTGCTTTCGAGGTTTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp GGATGGAGAAGAGGAAGCTCAGGTACAGCCAGGGGCCACACTCCCCTTTCTGCAGAAGGCCTGTCCAACTaGTTGGGGCTTATCCAGGCA +
Preference number: 4 (lower is better)
Translates to: GWRRGSSGTARGHTPLSAEGLSN*LGLIQA
Trigger: TGCCTGGATAAGCCCCAACCAGTTGGACAGGCCTTC...TGCAGAAAGGGGAGTGTGGCCCCTGGCTGTACCTGAGCTTCCTCTTCTCCATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp GGATGGAGAAGAGGAAGCTCAGGTACAGCCAGGGGCCACACTCCCCTTTCTGCAAAGAAACTGGCATCCTaGCCCTGGGAGAGGCCTACT +
Preference number: 4 (lower is better)
Translates to: GWRRGSSGTARGHTPLSAKKLAS*PWERPT
Trigger: AGTAGGCCTCTCCCAGGGCCAGGATGCCAGTTTCTT...TGCAGAAAGGGGAGTGTGGCCCCTGGCTGTACCTGAGCTTCCTCTTCTCCATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR TCA 90 bp GGATGGAGAAGAGGAAGCTCAGGTACAGCCAGGGGCCACACTCCCCTTTCTGCATGGATCTTCAGGGGGTaGATAAGTAGGGTAGGCCCT +
Preference number: 4 (lower is better)
Translates to: GWRRGSSGTARGHTPLSAWIFRG*ISRVGP
Trigger: AGGGCCTACCCTACTTATTCACCCCCTGAAGATCCA...TGCAGAAAGGGGAGTGTGGCCCCTGGCTGTACCTGAGCTTCCTCTTCTCCATCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR TCA 90 bp GGATGGAGAAGAGGAAGCTCAGGTACAGCCAGGGGCCACACTCCCCTTTCTGCACCCACAAAGTCACCTTaGCTTAGGGGGCAAACAGCA +
Preference number: 4 (lower is better)
Translates to: GWRRGSSGTARGHTPLSAPTKSP*LRGQTA
Trigger: TGCTGTTTGCCCCCTAAGTCAAGGTGACTTTGTGGG...TGCAGAAAGGGGAGTGTGGCCCCTGGCTGTACCTGAGCTTCCTCTTCTCCATCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR TCA 90 bp AAGAAACCTCGAAAGCAAAAACTGGAGTGCAGTAGCAGCAGCAGCCTCCCTGGGGCCTGGTACCCAAGCTaGGGCCAGATAGGTAGGGCT +
Preference number: 4 (lower is better)
Translates to: KKPRKQKLECSSSSSLPGAWYPS*GQIGRA
Trigger: AGCCCTACCTATCTGGCCTCAGCTTGGGTACCAGGC...CCCAGGGAGGCTGCTGCTGCTACTGCACTCCAGTTTTTGCTTTCGAGGTTTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR TCA 90 bp CTCAGCCCCAGGCCCTACTCTGTGGTGTGTGACCTTCCAAAGCCCAACAAAGTGAGGTCAGAACCCGGGTaGTTCTGTGATGTCTCAGGG +
Preference number: 4 (lower is better)
Translates to: LSPRPYSVVCDLPKPNKVRSEPG*FCDVSG
Trigger: CCCTGAGACATCACAGAATCACCCGGGTTCTGACCT...CACTTTGTTGGGCTTTGGAAGGTCACACACCACAGAGTAGGGCCTGGGGCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR GCA 90 bp GCAGACTTGGCTGCTAATCAGTGGTTCATCATTCATTGGGGGAAAGGGGCAGGGTTCCTCTGTCTCCATTaGCCCAGGTGGCCGGGAGGA +
Preference number: 4 (lower is better)
Translates to: ADLAANQWFIIHWGKGAGFLCLH*PRWPGG
Trigger: TCCTCCCGGCCACCTGGGGCAATGGAGACAGAGGAA...CCCTGCCCCTTTCCCCCAATGAATGATGAACCACTGATTAGCAGCCAAGTCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR GCA 90 bp CTCAGCCCCAGGCCCTACTCTGTGGTGTGTGACCTTCCAAAGCCCAACAAAGTGGCAAGAGAGGCACCTTaGTCAGCCCTCTCCTTTGAC +
Preference number: 4 (lower is better)
Translates to: LSPRPYSVVCDLPKPNKVAREAP*SALSFD
Trigger: GTCAAAGGAGAGGGCTGAGCAAGGTGCCTCTCTTGC...CACTTTGTTGGGCTTTGGAAGGTCACACACCACAGAGTAGGGCCTGGGGCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR GCA 90 bp TGGGCACTTCTCTCTTGGAATGCTGTGCTTGGGGTAAGGAGGGCCTTCCTCACCGCCACATATCCTGGCTaGCCCACTTCAGGTGGTAAG +
Preference number: 4 (lower is better)
Translates to: WALLSWNAVLGVRRAFLTATYPG*PTSGGK
Trigger: CTTACCACCTGAAGTGGGGCAGCCAGGATATGTGGC...GGTGAGGAAGGCCCTCCTTACCCCAAGCACAGCATTCCAAGAGAGAAGTGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp AAGAAACCTCGAAAGCAAAAACTGGAGTGCAGTAGCAGCAGCAGCCTCCCTGGGCAGGAAGCATCACAGTaGGGTCCAGCCCGGTCAGGT +
Preference number: 4 (lower is better)
Translates to: KKPRKQKLECSSSSSLPGQEASQ*GPARSG
Trigger: ACCTGACCGGGCTGGACCCCACTGTGATGCTTCCTG...CCCAGGGAGGCTGCTGCTGCTACTGCACTCCAGTTTTTGCTTTCGAGGTTTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp GGAGAAGAGGAAGCTCAGGTACAGCCAGGGGCCACACTCCCCTTTCTGCACTGGAGCCCAGGTTCATATTaGGCCGTGGATACATTTGGG +
Preference number: 4 (lower is better)
Translates to: GEEEAQVQPGATLPFLHWSPGSY*AVDTFG
Trigger: CCCAAATGTATCCACGGCCCAATATGAACCTGGGCT...CCAGTGCAGAAAGGGGAGTGTGGCCCCTGGCTGTACCTGAGCTTCCTCTTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp GCAGACTTGGCTGCTAATCAGTGGTTCATCATTCATTGGGGGAAAGGGGCAGGGGGCCTGGGGATGTGGTaGGATGGTAGCCCAGGTTCA +
Preference number: 4 (lower is better)
Translates to: ADLAANQWFIIHWGKGAGGLGMW*DGSPGS
Trigger: TGAACCTGGGCTACCATCCCACCACATCCCCAGGCC...CCCTGCCCCTTTCCCCCAATGAATGATGAACCACTGATTAGCAGCCAAGTCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp CTCAGCCCCAGGCCCTACTCTGTGGTGTGTGACCTTCCAAAGCCCAACAAAGTGGGACCAAGTGGGAATTaGAGAGCTCCATCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: LSPRPYSVVCDLPKPNKVGPSGN*RAPSPG
Trigger: CCCTGGAGATGGAGCTCTCCAATTCCCACTTGGTCC...CACTTTGTTGGGCTTTGGAAGGTCACACACCACAGAGTAGGGCCTGGGGCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp GGATGGAGAAGAGGAAGCTCAGGTACAGCCAGGGGCCACACTCCCCTTTCTGCACCAATCATAGGCCCCTaGGGGTTCAGTATAGAGGGA +
Preference number: 4 (lower is better)
Translates to: GWRRGSSGTARGHTPLSAPIIGP*GFSIEG
Trigger: TCCCTCTATACTGAACCCCCAGGGGCCTATGATTGG...TGCAGAAAGGGGAGTGTGGCCCCTGGCTGTACCTGAGCTTCCTCTTCTCCATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp CTCAGCCCCAGGCCCTACTCTGTGGTGTGTGACCTTCCAAAGCCCAACAAAGTGGTGCTGTCAACACCATaGGTCCCCAGACAGGTCTTC +
Preference number: 4 (lower is better)
Translates to: LSPRPYSVVCDLPKPNKVVLSTP*VPRQVF
Trigger: GAAGACCTGTCTGGGGACCCATGGTGTTGACAGCAC...CACTTTGTTGGGCTTTGGAAGGTCACACACCACAGAGTAGGGCCTGGGGCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR TCA 90 bp GGATGGGCAAGGCTTAAGGAACATTTTGTGTTGGGAGGCTTGAGAAGGGAGTTTGGGCACCTGAGGGGCTaGGCTCACGTGCTCATGAGG +
Preference number: 4 (lower is better)
Translates to: GWARLKEHFVLGGLRREFGHLRG*AHVLMR
Trigger: CCTCATGAGCACGTGAGCTCAGCCCCTCAGGTGCCC...AAACTCCCTTCTCAAGCCTCCCAACACAAAATGTTCCTTAAGCCTTGCCCATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR TCA 90 bp TGGGCACTTCTCTCTTGGAATGCTGTGCTTGGGGTAAGGAGGGCCTTCCTCACCCCTAAGGGCCTCATCTaGTACTCTAAGACGGGCTTC +
Preference number: 4 (lower is better)
Translates to: WALLSWNAVLGVRRAFLTPKGLI*YSKTGF
Trigger: GAAGCCCGTCTTAGAGTATCAGATGAGGCCCTTAGG...GGTGAGGAAGGCCCTCCTTACCCCAAGCACAGCATTCCAAGAGAGAAGTGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR TCA 90 bp CTCAGCCCCAGGCCCTACTCTGTGGTGTGTGACCTTCCAAAGCCCAACAAAGTGCTCTACCAGGGCCTGTaGGAAACTCACAGTGGCATT +
Preference number: 4 (lower is better)
Translates to: LSPRPYSVVCDLPKPNKVLYQGL*ETHSGI
Trigger: AATGCCACTGTGAGTTTCTCACAGGCCCTGGTAGAG...CACTTTGTTGGGCTTTGGAAGGTCACACACCACAGAGTAGGGCCTGGGGCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR TCA 90 bp GCAGACTTGGCTGCTAATCAGTGGTTCATCATTCATTGGGGGAAAGGGGCAGGGGGTTCCCATTGCTGGTaGACTCTACCAGGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: ADLAANQWFIIHWGKGAGGSHCW*TLPGPV
Trigger: CACAGGCCCTGGTAGAGTTCACCAGCAATGGGAACC...CCCTGCCCCTTTCCCCCAATGAATGATGAACCACTGATTAGCAGCCAAGTCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR TCA 90 bp CTCAGCCCCAGGCCCTACTCTGTGGTGTGTGACCTTCCAAAGCCCAACAAAGTGGGGCCAACCCCAATCTaGGAAATGGTGACAAAGACC +
Preference number: 4 (lower is better)
Translates to: LSPRPYSVVCDLPKPNKVGPTPI*EMVTKT
Trigger: GGTCTTTGTCACCATTTCTCAGATTGGGGTTGGCCC...CACTTTGTTGGGCTTTGGAAGGTCACACACCACAGAGTAGGGCCTGGGGCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR TCA 90 bp GAGGCCAGAAAGTTGGAATTTGGGCACTTCTCTCTTGGAATGCTGTGCTTGGGGCTGCTGGCAGCAGGATaGAGGGTACACACCCAGCCT +
Preference number: 4 (lower is better)
Translates to: EARKLEFGHFSLGMLCLGLLAAG*RVHTQP
Trigger: AGGCTGGGTGTGTACCCTTCATCCTGCTGCCAGCAG...CCCCAAGCACAGCATTCCAAGAGAGAAGTGCCCAAATTCCAACTTTCTGGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR GCA 90 bp CTCAGCCCCAGGCCCTACTCTGTGGTGTGTGACCTTCCAAAGCCCAACAAAGTGACAGGTAAGGAAAGCTaGTGGCAGCAGGATGAAGGG +
Preference number: 4 (lower is better)
Translates to: LSPRPYSVVCDLPKPNKVTGKES*WQQDEG
Trigger: CCCTTCATCCTGCTGCCAGCAGCTTTCCTTACCTGT...CACTTTGTTGGGCTTTGGAAGGTCACACACCACAGAGTAGGGCCTGGGGCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp CTGGTGTTTACTGAACCCATTATCCGGGCAGTCTTGTGGCCTGGTACCCAAGCTCTTCAGGGGCAGGCTTaGGTTGCACATGTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: LVFTEPIIRAVLWPGTQALQGQA*VAHVLR
Trigger: CCTCAGCACATGTGCAACCCAAGCCTGCCCCTGAAG...AGCTTGGGTACCAGGCCACAAGACTGCCCGGATAATGGGTTCAGTAAACACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp GGATGGGCAAGGCTTAAGGAACATTTTGTGTTGGGAGGCTTGAGAAGGGAGTTTTGGCGTGGGCCTCCCTaGCATGAGCTTCTCGGGCAC +
Preference number: 4 (lower is better)
Translates to: GWARLKEHFVLGGLRREFWRGPP*HELLGH
Trigger: GTGCCCGAGAAGCTCATGCCAGGGAGGCCCACGCCA...AAACTCCCTTCTCAAGCCTCCCAACACAAAATGTTCCTTAAGCCTTGCCCATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp TGGGCACTTCTCTCTTGGAATGCTGTGCTTGGGGTAAGGAGGGCCTTCCTCACCTCTGAATCTTCCTGCTaGGCCTGCAGCTCATCAGAC +
Preference number: 4 (lower is better)
Translates to: WALLSWNAVLGVRRAFLTSESSC*ACSSSD
Trigger: GTCTGATGAGCTGCAGGCCCAGCAGGAAGATTCAGA...GGTGAGGAAGGCCCTCCTTACCCCAAGCACAGCATTCCAAGAGAGAAGTGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp GGATGGAGAAGAGGAAGCTCAGGTACAGCCAGGGGCCACACTCCCCTTTCTGCATTGGGAGTGCAAACCTaGGGCCTTATTACAGAGTCC +
Preference number: 4 (lower is better)
Translates to: GWRRGSSGTARGHTPLSALGVQT*GLITES
Trigger: GGACTCTGTAATAAGGCCCCAGGTTTGCACTCCCAA...TGCAGAAAGGGGAGTGTGGCCCCTGGCTGTACCTGAGCTTCCTCTTCTCCATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp CTGGTGTTTACTGAACCCATTATCCGGGCAGTCTTGTGGCCTGGTACCCAAGCTCAACAGGCATGGAGATaGTGGGATGTGAGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: LVFTEPIIRAVLWPGTQAQQAWR*WDVRAR
Trigger: CCTCGCCCTCACATCCCACCATCTCCATGCCTGTTG...AGCTTGGGTACCAGGCCACAAGACTGCCCGGATAATGGGTTCAGTAAACACCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp CTCAGCCCCAGGCCCTACTCTGTGGTGTGTGACCTTCCAAAGCCCAACAAAGTGCATGGACACATCCCCTaGCCAAGAAACAGTTTGCCC +
Preference number: 4 (lower is better)
Translates to: LSPRPYSVVCDLPKPNKVHGHIP*PRNSLP
Trigger: GGGCAAACTGTTTCTTGGCCAGGGGATGTGTCCATG...CACTTTGTTGGGCTTTGGAAGGTCACACACCACAGAGTAGGGCCTGGGGCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp AAGAAACCTCGAAAGCAAAAACTGGAGTGCAGTAGCAGCAGCAGCCTCCCTGGGATCCGGGCAGTCTTGTaGCCTGGTACCCAAGCTGAG +
Preference number: 4 (lower is better)
Translates to: KKPRKQKLECSSSSSLPGIRAVL*PGTQAE
Trigger: CTCAGCTTGGGTACCAGGCCACAAGACTGCCCGGAT...CCCAGGGAGGCTGCTGCTGCTACTGCACTCCAGTTTTTGCTTTCGAGGTTTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR TCA 90 bp CCCCAAGCGGGAGGCAATGCAGACTTGGCTGCTAATCAGTGGTTCATCATTCATTTTGCTCAGCCCCAGTaGCCTTGCTCTTCCGGTGAC +
Preference number: 4 (lower is better)
Translates to: PQAGGNADLAANQWFIIHFAQPQ*PCSSGD
Trigger: GTCACCGGAAGAGCAAGGTCACTGGGGCTGAGCAAA...ATGAATGATGAACCACTGATTAGCAGCCAAGTCTGCATTGCCTCCCGCTTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR TCA 90 bp GGACATGATATCAACAGTTTTAGTGGTCTGGGGTGTATTTGCTGCCACCCAAGCGAGCTCACGTGCTCATaGGGCCTGGCTCTGACCCTC +
Preference number: 4 (lower is better)
Translates to: GHDINSFSGLGCICCHPSELTCS*GLALTL
Trigger: GAGGGTCAGAGCCAGGCCTCATGAGCACGTGAGCTC...GCTTGGGTGGCAGCAAATACACCCCAGACCACTAAAACTGTTGATATCATGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR TCA 90 bp GAGGCCAGAAAGTTGGAATTTGGGCACTTCTCTCTTGGAATGCTGTGCTTGGGGCCCCAGGGCCTCACCTaGATCATCCTCAAATCCAGG +
Preference number: 4 (lower is better)
Translates to: EARKLEFGHFSLGMLCLGPQGLT*IILKSR
Trigger: CCTGGATTTGAGGATGATTCAGGTGAGGCCCTGGGG...CCCCAAGCACAGCATTCCAAGAGAGAAGTGCCCAAATTCCAACTTTCTGGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR TCA 90 bp CTGGTGTTTACTGAACCCATTATCCGGGCAGTCTTGTGGCCTGGTACCCAAGCTAGGCTGTCCAAACCATaGACTCTCACTCAGCCCCAG +
Preference number: 4 (lower is better)
Translates to: LVFTEPIIRAVLWPGTQARLSKP*TLTQPQ
Trigger: CTGGGGCTGAGTGAGAGTTCATGGTTTGGACAGCCT...AGCTTGGGTACCAGGCCACAAGACTGCCCGGATAATGGGTTCAGTAAACACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR TCA 90 bp CCCCAAGCGGGAGGCAATGCAGACTTGGCTGCTAATCAGTGGTTCATCATTCATCAGGTCCCACACGCCTaGGTCACTTGGCGTTTGTCT +
Preference number: 4 (lower is better)
Translates to: PQAGGNADLAANQWFIIHQVPHA*VTWRLS
Trigger: AGACAAACGCCAAGTGACTCAGGCGTGTGGGACCTG...ATGAATGATGAACCACTGATTAGCAGCCAAGTCTGCATTGCCTCCCGCTTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR TCA 90 bp GGACATGATATCAACAGTTTTAGTGGTCTGGGGTGTATTTGCTGCCACCCAAGCAGTACCATCCACGTGTaGGCTGGAGCAGGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: GHDINSFSGLGCICCHPSSTIHV*AGAGQG
Trigger: CCCCTGCCCTGCTCCAGCTCACACGTGGATGGTACT...GCTTGGGTGGCAGCAAATACACCCCAGACCACTAAAACTGTTGATATCATGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR TCA 90 bp GGATGGAGAAGAGGAAGCTCAGGTACAGCCAGGGGCCACACTCCCCTTTCTGCAATATCCAGATGTCAGTaGGAGCTAGAAGTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: GWRRGSSGTARGHTPLSAISRCQ*ELEVER
Trigger: CCTCTCCACTTCTAGCTCTCACTGACATCTGGATAT...TGCAGAAAGGGGAGTGTGGCCCCTGGCTGTACCTGAGCTTCCTCTTCTCCATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR GCA 90 bp TGGGCACTTCTCTCTTGGAATGCTGTGCTTGGGGTAAGGAGGGCCTTCCTCACCTTCTGTCGCCTCAGCTaGCTTGTTCTTGGCTCCTTT +
Preference number: 4 (lower is better)
Translates to: WALLSWNAVLGVRRAFLTFCRLS*LVLGSF
Trigger: AAAGGAGCCAAGAACAAGGCAGCTGAGGCGACAGAA...GGTGAGGAAGGCCCTCCTTACCCCAAGCACAGCATTCCAAGAGAGAAGTGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR GCA 90 bp CCCCAAGCGGGAGGCAATGCAGACTTGGCTGCTAATCAGTGGTTCATCATTCATTTCAGGGCCATGGGCTaGTTCACTCAGGCCATCGTG +
Preference number: 4 (lower is better)
Translates to: PQAGGNADLAANQWFIIHFRAMG*FTQAIV
Trigger: CACGATGGCCTGAGTGAAGCAGCCCATGGCCCTGAA...ATGAATGATGAACCACTGATTAGCAGCCAAGTCTGCATTGCCTCCCGCTTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR GCA 90 bp TGGGCACTTCTCTCTTGGAATGCTGTGCTTGGGGTAAGGAGGGCCTTCCTCACCTGGGTTTACCTCTCCTaGTACTACCTTCTCCCCTGT +
Preference number: 4 (lower is better)
Translates to: WALLSWNAVLGVRRAFLTWVYLS*YYLLPC
Trigger: ACAGGGGAGAAGGTAGTAGCAGGAGAGGTAAACCCA...GGTGAGGAAGGCCCTCCTTACCCCAAGCACAGCATTCCAAGAGAGAAGTGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR GCA 90 bp GGATGGGCAAGGCTTAAGGAACATTTTGTGTTGGGAGGCTTGAGAAGGGAGTTTAGTATCGAGGGAGGCTaGTCACACCCCAGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: GWARLKEHFVLGGLRREFSIEGG*SHPRAG
Trigger: GCCTGCCCTGGGGTGTGAGCAGCCTCCCTCGATACT...AAACTCCCTTCTCAAGCCTCCCAACACAAAATGTTCCTTAAGCCTTGCCCATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR GCA 90 bp CTCAGCCCCAGGCCCTACTCTGTGGTGTGTGACCTTCCAAAGCCCAACAAAGTGTCATCTGAATCTTCCTaGTGGGCCTGCAGCTCATCA +
Preference number: 4 (lower is better)
Translates to: LSPRPYSVVCDLPKPNKVSSESS*WACSSS
Trigger: TGATGAGCTGCAGGCCCAGCAGGAAGATTCAGATGA...CACTTTGTTGGGCTTTGGAAGGTCACACACCACAGAGTAGGGCCTGGGGCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR GCA 90 bp GGAGAAGAGGAAGCTCAGGTACAGCCAGGGGCCACACTCCCCTTTCTGCACTGGATAAAGGGCTGCAACTaGCAAGAAGCCCTGTCATTT +
Preference number: 4 (lower is better)
Translates to: GEEEAQVQPGATLPFLHWIKGCN*QEALSF
Trigger: AAATGACAGGGCTTCTTGGCAGTTGCAGCCCTTTAT...CCAGTGCAGAAAGGGGAGTGTGGCCCCTGGCTGTACCTGAGCTTCCTCTTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR GCA 90 bp TGGGCACTTCTCTCTTGGAATGCTGTGCTTGGGGTAAGGAGGGCCTTCCTCACCCAGGAGAAGGGAGGGTaGCATTCATTCCATAAAGGG +
Preference number: 4 (lower is better)
Translates to: WALLSWNAVLGVRRAFLTQEKGG*HSFHKG
Trigger: CCCTTTATGGAATGAATGGCACCCTCCCTTCTCCTG...GGTGAGGAAGGCCCTCCTTACCCCAAGCACAGCATTCCAAGAGAGAAGTGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR GCA 90 bp AAGAAACCTCGAAAGCAAAAACTGGAGTGCAGTAGCAGCAGCAGCCTCCCTGGGCCCAATGTCACCCTGTaGTGTCAACACCATGGGTCC +
Preference number: 4 (lower is better)
Translates to: KKPRKQKLECSSSSSLPGPNVTL*CQHHGS
Trigger: GGACCCATGGTGTTGACAGCACAGGGTGACATTGGG...CCCAGGGAGGCTGCTGCTGCTACTGCACTCCAGTTTTTGCTTTCGAGGTTTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp TGGGCACTTCTCTCTTGGAATGCTGTGCTTGGGGTAAGGAGGGCCTTCCTCACCTATATGGAGACTGGCTaGAAGGCCTGTCCAACTGGT +
Preference number: 4 (lower is better)
Translates to: WALLSWNAVLGVRRAFLTYMETG*KACPTG
Trigger: ACCAGTTGGACAGGCCTTCCAGCCAGTCTCCATATA...GGTGAGGAAGGCCCTCCTTACCCCAAGCACAGCATTCCAAGAGAGAAGTGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp CTCAGCCCCAGGCCCTACTCTGTGGTGTGTGACCTTCCAAAGCCCAACAAAGTGAACTGGAAGAGCAACTaGGCTCATCAACAGGCAGCA +
Preference number: 4 (lower is better)
Translates to: LSPRPYSVVCDLPKPNKVNWKSN*AHQQAA
Trigger: TGCTGCCTGTTGATGAGCCCAGTTGCTCTTCCAGTT...CACTTTGTTGGGCTTTGGAAGGTCACACACCACAGAGTAGGGCCTGGGGCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp TCTGGGGTGTATTTGCTGCCACCCAAGCCAGCACTAGTCTGTGTTTGGAAACAGCTCTACCGCCTGCTGTaGCTGGCACAGTCCACATGT +
Preference number: 4 (lower is better)
Translates to: SGVYLLPPKPALVCVWKQLYRLL*LAQSTC
Trigger: ACATGTGGACTGTGCCAGCCACAGCAGGCGGTAGAG...CTGTTTCCAAACACAGACTAGTGCTGGCTTGGGTGGCAGCAAATACACCCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp GGAGAAGAGGAAGCTCAGGTACAGCCAGGGGCCACACTCCCCTTTCTGCACTGGAGGAGGGAGAGAGACTaGTGTTTACTGAACCCATTA +
Preference number: 4 (lower is better)
Translates to: GEEEAQVQPGATLPFLHWRRERD*CLLNPL
Trigger: TAATGGGTTCAGTAAACACCAGTCTCTCTCCCTCCT...CCAGTGCAGAAAGGGGAGTGTGGCCCCTGGCTGTACCTGAGCTTCCTCTTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR CAA 72 bp GTATTTGCTGCCACCCAAGCCAGCACTAGTCTGTGTTaGGAAACAGGCCTGAAGCTTGGCTGGCTCTCCCAA +
Preference number: 4 (lower is better)
Translates to: VFAATQASTSLC*ETGLKLGWLSQ
Trigger: TTGGGAGAGCCAGCCAAGCTTCAGGCCTGTTTCCAAACACAGACTAGTGCTGGCTTGGGTGGCAGCAAATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR CAA 72 bp ACAAGCTGTCTACCAGGTCCCACACGCCTGAGTCACTaGGCGTTTGTCTTCAGTACCTGGGCATCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: TSCLPGPTRLSH*AFVFSTWASSA
Trigger: AGCAGAAGATGCCCAGGTACTGAAGACAAACGCCAAGTGACTCAGGCGTGTGGGACCTGGTAGACAGCTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR TCA 90 bp CTGGTGTTTACTGAACCCATTATCCGGGCAGTCTTGTGGCCTGGTACCCAAGCTCAGGTCTGCTATTTGTaGGTAAGGGCACTGGGCCAA +
Preference number: 4 (lower is better)
Translates to: LVFTEPIIRAVLWPGTQAQVCYL*VRALGQ
Trigger: TTGGCCCAGTGCCCTTACTCACAAATAGCAGACCTG...AGCTTGGGTACCAGGCCACAAGACTGCCCGGATAATGGGTTCAGTAAACACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR GCA 90 bp CTTGCTGGCTGTGATAAATGGACCCTCATTTTCTATCTTTCCCCTACACTCCACTCCTGGGCCTCAAGCTaGTCCCGCCGAAGCTCCCAA +
Preference number: 4 (lower is better)
Translates to: LAGCDKWTLIFYLSPTLHSWASS*SRRSSQ
Trigger: TTGGGAGCTTCGGCGGGAGCAGCTTGAGGCCCAGGA...GTGGAGTGTAGGGGAAAGATAGAAAATGAGGGTCCATTTATCACAGCCAGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR GCA 90 bp CTGGTGTTTACTGAACCCATTATCCGGGCAGTCTTGTGGCCTGGTACCCAAGCTGACAGGAGCTCAAGCTaGCCTGAAAGAAGAGGCAAG +
Preference number: 4 (lower is better)
Translates to: LVFTEPIIRAVLWPGTQADRSSS*PERRGK
Trigger: CTTGCCTCTTCTTTCAGGGCAGCTTGAGCTCCTGTC...AGCTTGGGTACCAGGCCACAAGACTGCCCGGATAATGGGTTCAGTAAACACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp GGACATGATATCAACAGTTTTAGTGGTCTGGGGTGTATTTGCTGCCACCCAAGCGCTCCTCTAGGCTACTaGCTTCAGGGGCAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: GHDINSFSGLGCICCHPSAPLGY*LQGQAW
Trigger: CCAAGCCTGCCCCTGAAGCCAGTAGCCTAGAGGAGC...GCTTGGGTGGCAGCAAATACACCCCAGACCACTAAAACTGTTGATATCATGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp GCACAAAATTACAGCATCCCAAACCCAGCGTGGGTCACAAGAAGAAACCTCGAATCTCGGTTTGCTCTCTaGCCCCCAGAGGCCATGCTG +
Preference number: 4 (lower is better)
Translates to: AQNYSIPNPAWVTRRNLESRFAL*PPEAML
Trigger: CAGCATGGCCTCTGGGGGCCAGAGAGCAAACCGAGA...TTCGAGGTTTCTTCTTGTGACCCACGCTGGGTTTGGGATGCTGTAATTTTGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp GAGGCCAGAAAGTTGGAATTTGGGCACTTCTCTCTTGGAATGCTGTGCTTGGGGCTCGTCATCATCATCTaGCAAGGCCATCTCCTCCCC +
Preference number: 4 (lower is better)
Translates to: EARKLEFGHFSLGMLCLGLVIII*QGHLLP
Trigger: GGGGAGGAGATGGCCTTGCCAGATGATGATGACGAG...CCCCAAGCACAGCATTCCAAGAGAGAAGTGCCCAAATTCCAACTTTCTGGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp TCTGTTCCCAAGCTAAATTGCCATATCTCAGGAATGGCAAGAACCCTGTTGACTCGAACCTCTCGGGCCTaGGCTTCTCGGGTTCTGGCC +
Preference number: 4 (lower is better)
Translates to: SVPKLNCHISGMARTLLTRTSRA*ASRVLA
Trigger: GGCCAGAACCCGAGAAGCCCAGGCCCGAGAGGTTCG...AGTCAACAGGGTTCTTGCCATTCCTGAGATATGGCAATTTAGCTTGGGAACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp TCTGGGGTGTATTTGCTGCCACCCAAGCCAGCACTAGTCTGTGTTTGGAAACAGTGTCAAAGGTCACCATaGGAGGCAGCTCAGGGAGGT +
Preference number: 4 (lower is better)
Translates to: SGVYLLPPKPALVCVWKQCQRSP*EAAQGG
Trigger: ACCTCCCTGAGCTGCCTCCCATGGTGACCTTTGACA...CTGTTTCCAAACACAGACTAGTGCTGGCTTGGGTGGCAGCAAATACACCCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp AAGAAACCTCGAAAGCAAAAACTGGAGTGCAGTAGCAGCAGCAGCCTCCCTGGGTGCCTATATGGAGACTaGCTGGAAGGCCTGTCCAAC +
Preference number: 4 (lower is better)
Translates to: KKPRKQKLECSSSSSLPGCLYGD*LEGLSN
Trigger: GTTGGACAGGCCTTCCAGCCAGTCTCCATATAGGCA...CCCAGGGAGGCTGCTGCTGCTACTGCACTCCAGTTTTTGCTTTCGAGGTTTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp GCAGACTTGGCTGCTAATCAGTGGTTCATCATTCATTGGGGGAAAGGGGCAGGGTTGACAGGTCAAGGCTaGAAGGCCCATAGTGAGTGG +
Preference number: 4 (lower is better)
Translates to: ADLAANQWFIIHWGKGAGLTGQG*KAHSEW
Trigger: CCACTCACTATGGGCCTTCCAGCCTTGACCTGTCAA...CCCTGCCCCTTTCCCCCAATGAATGATGAACCACTGATTAGCAGCCAAGTCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp GGAGAAGAGGAAGCTCAGGTACAGCCAGGGGCCACACTCCCCTTTCTGCACTGGTCCAGGACCTTGCAATaGAGACATGTTGTTCATCTA +
Preference number: 4 (lower is better)
Translates to: GEEEAQVQPGATLPFLHWSRTLQ*RHVVHL
Trigger: TAGATGAACAACATGTCTCCATTGCAAGGTCCTGGA...CCAGTGCAGAAAGGGGAGTGTGGCCCCTGGCTGTACCTGAGCTTCCTCTTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR CAA 72 bp CCAGAACAGCAGCTGAGATGCCTTTGGTATCCTGTCTaGGGAGTGCAAACCTGGGGCCTTATTACAGAGTCC +
Preference number: 4 (lower is better)
Translates to: PEQQLRCLWYPV*GVQTWGLITES
Trigger: GGACTCTGTAATAAGGCCCCAGGTTTGCACTCCCAAGACAGGATACCAAAGGCATCTCAGCTGCTGTTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR TCA 90 bp CTGGTGTTTACTGAACCCATTATCCGGGCAGTCTTGTGGCCTGGTACCCAAGCTTCTTGCTGGTCACTCTaGGGAGTCAAAAGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: LVFTEPIIRAVLWPGTQASCWSL*GVKSSP
Trigger: TGGGGAACTTTTGACTCCTCAGAGTGACCAGCAAGA...AGCTTGGGTACCAGGCCACAAGACTGCCCGGATAATGGGTTCAGTAAACACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR TCA 90 bp TGGGCACTTCTCTCTTGGAATGCTGTGCTTGGGGTAAGGAGGGCCTTCCTCACCATCAGGCAGGTACTTTaGTCTTTCTTGGAGCAGGTT +
Preference number: 4 (lower is better)
Translates to: WALLSWNAVLGVRRAFLTIRQVL*SFLEQV
Trigger: AACCTGCTCCAAGAAAGATCAAAGTACCTGCCTGAT...GGTGAGGAAGGCCCTCCTTACCCCAAGCACAGCATTCCAAGAGAGAAGTGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR TCA 90 bp GGATGGGCAAGGCTTAAGGAACATTTTGTGTTGGGAGGCTTGAGAAGGGAGTTTCTGGTCTGGGTCCCTTaGGTGGTGGTGTTAGTGCCA +
Preference number: 4 (lower is better)
Translates to: GWARLKEHFVLGGLRREFLVWVP*VVVLVP
Trigger: TGGCACTAACACCACCACTCAAGGGACCCAGACCAG...AAACTCCCTTCTCAAGCCTCCCAACACAAAATGTTCCTTAAGCCTTGCCCATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR TCA 90 bp GGAGAAGAGGAAGCTCAGGTACAGCCAGGGGCCACACTCCCCTTTCTGCACTGGTATTGGGTAATAAGATaGAGGCAGCTACTTCCACTA +
Preference number: 4 (lower is better)
Translates to: GEEEAQVQPGATLPFLHWYWVIR*RQLLPL
Trigger: TAGTGGAAGTAGCTGCCTTCATCTTATTACCCAATA...CCAGTGCAGAAAGGGGAGTGTGGCCCCTGGCTGTACCTGAGCTTCCTCTTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR TCA 90 bp GCAGACTTGGCTGCTAATCAGTGGTTCATCATTCATTGGGGGAAAGGGGCAGGGAGCAAGCCATCACCCTaGAAGTCACTGTTCCCCAAA +
Preference number: 4 (lower is better)
Translates to: ADLAANQWFIIHWGKGAGSKPSP*KSLFPK
Trigger: TTTGGGGAACAGTGACTTTCAGGGTGATGGCTTGCT...CCCTGCCCCTTTCCCCCAATGAATGATGAACCACTGATTAGCAGCCAAGTCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR TCA 90 bp TCTGGGGTGTATTTGCTGCCACCCAAGCCAGCACTAGTCTGTGTTTGGAAACAGACCCGGGTGATTCTGTaGTGTCTCAGGGATGGAGAA +
Preference number: 4 (lower is better)
Translates to: SGVYLLPPKPALVCVWKQTRVIL*CLRDGE
Trigger: TTCTCCATCCCTGAGACATCACAGAATCACCCGGGT...CTGTTTCCAAACACAGACTAGTGCTGGCTTGGGTGGCAGCAAATACACCCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR GCA 90 bp TCTGTTCCCAAGCTAAATTGCCATATCTCAGGAATGGCAAGAACCCTGTTGACTGGGGTAGACAATCCCTaGGGACAAGCCCCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: SVPKLNCHISGMARTLLTGVDNP*GQAPGP
Trigger: AGGCCCTGGGGCTTGTCCGCAGGGATTGTCTACCCC...AGTCAACAGGGTTCTTGCCATTCCTGAGATATGGCAATTTAGCTTGGGAACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR GCA 90 bp CCCTTTCTTGCTGGCTGTGATAAATGGACCCTCATTTTCTATCTTTCCCCTACAAGCTTCTCGGGCACGTaGCTCCTGGGCCTCAAGCTG +
Preference number: 4 (lower is better)
Translates to: PFLAGCDKWTLIFYLSPTSFSGT*LLGLKL
Trigger: CAGCTTGAGGCCCAGGAGGCACGTGCCCGAGAAGCT...TGTAGGGGAAAGATAGAAAATGAGGGTCCATTTATCACAGCCAGCAAGAAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp TCTGGGGTGTATTTGCTGCCACCCAAGCCAGCACTAGTCTGTGTTTGGAAACAGGGGCACTCTGAGAGCTaGGAAATTGGCAGGGTAACT +
Preference number: 4 (lower is better)
Translates to: SGVYLLPPKPALVCVWKQGHSES*EIGRVT
Trigger: AGTTACCCTGCCAATTTCCCAGCTCTCAGAGTGCCC...CTGTTTCCAAACACAGACTAGTGCTGGCTTGGGTGGCAGCAAATACACCCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp TCCCCTTTCTGCACTGGGAGAGAAATAACTCTTACACCTGGGGTGATGATGTACAAGTGTGGGCCTCCCTaGCATAGGCTTCCCTGCCAT +
Preference number: 4 (lower is better)
Translates to: SPFCTGREITLTPGVMMYKCGPP*HRLPCH
Trigger: ATGGCAGGGAAGCCTATGCCAGGGAGGCCCACACTT...GTACATCATCACCCCAGGTGTAAGAGTTATTTCTCTCCCAGTGCAGAAAGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp CACATGAGTACTCTCAGAGGGTCTAGACATGGGGAAGAAGGGTTCAAAAGAAAGGGGCTTCTCGGGTTCTaGCCTCCCTGCCATGAGCTT +
Preference number: 4 (lower is better)
Translates to: HMSTLRGSRHGEEGFKRKGLLGF*PPCHEL
Trigger: AAGCTCATGGCAGGGAGGCCAGAACCCGAGAAGCCC...CTTTCTTTTGAACCCTTCTTCCCCATGTCTAGACCCTCTGAGAGTACTCATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp GGACATGATATCAACAGTTTTAGTGGTCTGGGGTGTATTTGCTGCCACCCAAGCGAAGTCCCTCCAGTCTaGCTCGCTGCTTGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: GHDINSFSGLGCICCHPSEVPPV*LAACSG
Trigger: ACCACTGCAAGCAGCGAGCCAGACTGGAGGGACTTC...GCTTGGGTGGCAGCAAATACACCCCAGACCACTAAAACTGTTGATATCATGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp AAGAAACCTCGAAAGCAAAAACTGGAGTGCAGTAGCAGCAGCAGCCTCCCTGGGAGCTGCAGGACATGCTaGAAAAGAGGTTCCCATTGC +
Preference number: 4 (lower is better)
Translates to: KKPRKQKLECSSSSSLPGSCRTC*KRGSHC
Trigger: GCAATGGGAACCTCTTTTCCAGCATGTCCTGCAGCT...CCCAGGGAGGCTGCTGCTGCTACTGCACTCCAGTTTTTGCTTTCGAGGTTTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp GGACATGATATCAACAGTTTTAGTGGTCTGGGGTGTATTTGCTGCCACCCAAGCGCTCTGGGAGGCCTGTaGCTGGAGGTTATAGCAAGG +
Preference number: 4 (lower is better)
Translates to: GHDINSFSGLGCICCHPSALGGL*LEVIAR
Trigger: CCTTGCTATAACCTCCAGCCACAGGCCTCCCAGAGC...GCTTGGGTGGCAGCAAATACACCCCAGACCACTAAAACTGTTGATATCATGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp CTTGCTGGCTGTGATAAATGGACCCTCATTTTCTATCTTTCCCCTACACTCCACCAGGCATGGAGATGGTaGGATGTGAGGGCGAGGGTG +
Preference number: 4 (lower is better)
Translates to: LAGCDKWTLIFYLSPTLHQAWRW*DVRARV
Trigger: CACCCTCGCCCTCACATCCCACCATCTCCATGCCTG...GTGGAGTGTAGGGGAAAGATAGAAAATGAGGGTCCATTTATCACAGCCAGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp CCCCAAGCGGGAGGCAATGCAGACTTGGCTGCTAATCAGTGGTTCATCATTCATGGTAAGGAAAGCTGCTaGCAGCAGGATGAAGGGTAC +
Preference number: 4 (lower is better)
Translates to: PQAGGNADLAANQWFIIHGKESC*QQDEGY
Trigger: GTACCCTTCATCCTGCTGCCAGCAGCTTTCCTTACC...ATGAATGATGAACCACTGATTAGCAGCCAAGTCTGCATTGCCTCCCGCTTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR TCA 90 bp TGCATGCTATATATGTGTGTGCATGTGTGTTTGTGTGTGTGTGTGTATGTATGTTGGGCCTCCCTGGCATaGGCTTCTCGGGCACGTGCC +
Preference number: 4 (lower is better)
Translates to: CMLYMCVHVCLCVCVYVCWASLA*ASRARA
Trigger: GGCACGTGCCCGAGAAGCTCATGCCAGGGAGGCCCA...ACATACATACACACACACACACAAACACACATGCACACACATATATAGCATGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR TCA 90 bp TCTGTTCCCAAGCTAAATTGCCATATCTCAGGAATGGCAAGAACCCTGTTGACTGAGGAATGCCATGGGTaGTGCCCACAGGCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: SVPKLNCHISGMARTLLTEECHG*CPQAWP
Trigger: AGGCCAAGCCTGTGGGCATCACCCATGGCATTCCTC...AGTCAACAGGGTTCTTGCCATTCCTGAGATATGGCAATTTAGCTTGGGAACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR TCA 90 bp CCCCAAGCGGGAGGCAATGCAGACTTGGCTGCTAATCAGTGGTTCATCATTCATAAGCTCTGCATGGTCTaGAATCCCCTTTCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: PQAGGNADLAANQWFIIHKLCMV*NPLSCW
Trigger: CCAGCAAGAAAGGGGATTTCAGACCATGCAGAGCTT...ATGAATGATGAACCACTGATTAGCAGCCAAGTCTGCATTGCCTCCCGCTTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR TCA 90 bp GCACAAAATTACAGCATCCCAAACCCAGCGTGGGTCACAAGAAGAAACCTCGAAGCCCAGAACAGCAGCTaGGATGCCTTTGGTATCCTG +
Preference number: 4 (lower is better)
Translates to: AQNYSIPNPAWVTRRNLEAQNSS*DAFGIL
Trigger: CAGGATACCAAAGGCATCTCAGCTGCTGTTCTGGGC...TTCGAGGTTTCTTCTTGTGACCCACGCTGGGTTTGGGATGCTGTAATTTTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR TCA 90 bp GCACAAAATTACAGCATCCCAAACCCAGCGTGGGTCACAAGAAGAAACCTCGAAACACACCCAGCCTCCTaGGTGTGTGAAGCTACTTCC +
Preference number: 4 (lower is better)
Translates to: AQNYSIPNPAWVTRRNLETHPAS*VCEATS
Trigger: GGAAGTAGCTTCACACACTCAGGAGGCTGGGTGTGT...TTCGAGGTTTCTTCTTGTGACCCACGCTGGGTTTGGGATGCTGTAATTTTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR TCA 90 bp TCCTCACCCTCTTTCATTCTCCAGCTCCACAACAGATACATTTCTTCACAATGTAGGGCCCTAGGCAGTTaGGATGCCAGCCCTCTGCAC +
Preference number: 4 (lower is better)
Translates to: SSPSFILQLHNRYISSQCRALGS*DASPLH
Trigger: GTGCAGAGGGCTGGCATCTCAACTGCCTAGGGCCCT...ACATTGTGAAGAAATGTATCTGTTGTGGAGCTGGAGAATGAAAGAGGGTGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR GCA 90 bp CTATTGGGTAATAAGATGAAGGCAGCTACTTCCACTAAGTCCCATTTTCCCTTAAAGACGGGCTTCTCCTaGCGGGCCTGGGTCTCTCGG +
Preference number: 4 (lower is better)
Translates to: LLGNKMKAATSTKSHFPLKTGFS*RAWVSR
Trigger: CCGAGAGACCCAGGCCCGGCAGGAGAAGCCCGTCTT...TAAGGGAAAATGGGACTTAGTGGAAGTAGCTGCCTTCATCTTATTACCCAATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR GCA 90 bp GAGGCCAGAAAGTTGGAATTTGGGCACTTCTCTCTTGGAATGCTGTGCTTGGGGAAGCAAAAACTGGAGTaGAGTAGCAGCAGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: EARKLEFGHFSLGMLCLGKQKLE*SSSSSL
Trigger: GAGGCTGCTGCTGCTACTGCACTCCAGTTTTTGCTT...CCCCAAGCACAGCATTCCAAGAGAGAAGTGCCCAAATTCCAACTTTCTGGCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR GCA 90 bp CCCTTTCTTGCTGGCTGTGATAAATGGACCCTCATTTTCTATCTTTCCCCTACAGATGGCTCTACCGCCTaGTGTGGCTGGCACAGTCCA +
Preference number: 4 (lower is better)
Translates to: PFLAGCDKWTLIFYLSPTDGSTA*CGWHSP
Trigger: TGGACTGTGCCAGCCACAGCAGGCGGTAGAGCCATC...TGTAGGGGAAAGATAGAAAATGAGGGTCCATTTATCACAGCCAGCAAGAAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR GCA 90 bp GCACAAAATTACAGCATCCCAAACCCAGCGTGGGTCACAAGAAGAAACCTCGAATCAGGGCTATGCCAGTaGCCCTCAGAGACAATGCCT +
Preference number: 4 (lower is better)
Translates to: AQNYSIPNPAWVTRRNLESGLCQ*PSETMP
Trigger: AGGCATTGTCTCTGAGGGGCACTGGCATAGCCCTGA...TTCGAGGTTTCTTCTTGTGACCCACGCTGGGTTTGGGATGCTGTAATTTTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR GCA 90 bp GGACATGATATCAACAGTTTTAGTGGTCTGGGGTGTATTTGCTGCCACCCAAGCAGTGTGTCAGGGCTATaGCAGTGCCCCTCAGAGACA +
Preference number: 4 (lower is better)
Translates to: GHDINSFSGLGCICCHPSSVSGL*QCPSET
Trigger: TGTCTCTGAGGGGCACTGGCATAGCCCTGACACACT...GCTTGGGTGGCAGCAAATACACCCCAGACCACTAAAACTGTTGATATCATGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR GCA 90 bp GAGGCCAGAAAGTTGGAATTTGGGCACTTCTCTCTTGGAATGCTGTGCTTGGGGAAAGGAACCTGCTTCTaGAGCCACATATCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: EARKLEFGHFSLGMLCLGKGTCF*SHISWL
Trigger: CAGCCAGGATATGTGGCTGCAGAAGCAGGTTCCTTT...CCCCAAGCACAGCATTCCAAGAGAGAAGTGCCCAAATTCCAACTTTCTGGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR GCA 90 bp CACATGAGTACTCTCAGAGGGTCTAGACATGGGGAAGAAGGGTTCAAAAGAAAGGGTCTGGGGTGTATTTaGTGCCACCCAAGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: HMSTLRGSRHGEEGFKRKGLGCI*CHPSQH
Trigger: GTGCTGGCTTGGGTGGCAGCAAATACACCCCAGACC...CTTTCTTTTGAACCCTTCTTCCCCATGTCTAGACCCTCTGAGAGTACTCATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp GGATGGAGAAGAGGAAGCTCAGGTACAGCCAGGGGCCACACTCCCCTTTCTGCACTCCATGGGTTTTTCTaGATCTTTACAGGCCATTTT +
Preference number: 4 (lower is better)
Translates to: GWRRGSSGTARGHTPLSALHGFF*IFTGHF
Trigger: AAAATGGCCTGTAAAGATCCAGAAAAACCCATGGAG...TGCAGAAAGGGGAGTGTGGCCCCTGGCTGTACCTGAGCTTCCTCTTCTCCATCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp GCACAAAATTACAGCATCCCAAACCCAGCGTGGGTCACAAGAAGAAACCTCGAACCTGTTTCTGGGCTATaGGGCTCCTCTAGGCTACTG +
Preference number: 4 (lower is better)
Translates to: AQNYSIPNPAWVTRRNLEPVSGL*GSSRLL
Trigger: CAGTAGCCTAGAGGAGCCCCATAGCCCAGAAACAGG...TTCGAGGTTTCTTCTTGTGACCCACGCTGGGTTTGGGATGCTGTAATTTTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp TCTGTTCCCAAGCTAAATTGCCATATCTCAGGAATGGCAAGAACCCTGTTGACTCCCCCACAGGGCCATTaGGTGGGTTTACCTCTCCTG +
Preference number: 4 (lower is better)
Translates to: SVPKLNCHISGMARTLLTPPQGH*VGLPLL
Trigger: CAGGAGAGGTAAACCCACCCAATGGCCCTGTGGGGG...AGTCAACAGGGTTCTTGCCATTCCTGAGATATGGCAATTTAGCTTGGGAACAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp TCCTCACCCTCTTTCATTCTCCAGCTCCACAACAGATACATTTCTTCACAATGTGGTGGCCTGGGGATGTaGTGGGATGGTAGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: SSPSFILQLHNRYISSQCGGLGM*WDGSPG
Trigger: ACCTGGGCTACCATCCCACCACATCCCCAGGCCACC...ACATTGTGAAGAAATGTATCTGTTGTGGAGCTGGAGAATGAAAGAGGGTGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp CTGGTGTTTACTGAACCCATTATCCGGGCAGTCTTGTGGCCTGGTACCCAAGCTAGGATAAGACCTAACTaGGTCAAGGAGCATGTAGCC +
Preference number: 4 (lower is better)
Translates to: LVFTEPIIRAVLWPGTQARIRPN*VKEHVA
Trigger: GGCTACATGCTCCTTGACCCAGTTAGGTCTTATCCT...AGCTTGGGTACCAGGCCACAAGACTGCCCGGATAATGGGTTCAGTAAACACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp CCCTTTCTTGCTGGCTGTGATAAATGGACCCTCATTTTCTATCTTTCCCCTACACTCCATTGCCCCAGGTaGCCGGGAGGACAAAAAGGG +
Preference number: 4 (lower is better)
Translates to: PFLAGCDKWTLIFYLSPTLHCPR*PGGQKG
Trigger: CCCTTTTTGTCCTCCCGGCCACCTGGGGCAATGGAG...TGTAGGGGAAAGATAGAAAATGAGGGTCCATTTATCACAGCCAGCAAGAAAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp CCCCAAGCGGGAGGCAATGCAGACTTGGCTGCTAATCAGTGGTTCATCATTCATCTAGGTTTCCATTCATaGCAGTGGAGGAGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: PQAGGNADLAANQWFIIHLGFHS*QWRSSW
Trigger: CCAGCTACTCCTCCACTGCCATGAATGGAAACCTAG...ATGAATGATGAACCACTGATTAGCAGCCAAGTCTGCATTGCCTCCCGCTTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp GAGGCCAGAAAGTTGGAATTTGGGCACTTCTCTCTTGGAATGCTGTGCTTGGGGTTCTCTCAACAGGCATaGAGATGGTGGGATGTGAGG +
Preference number: 4 (lower is better)
Translates to: EARKLEFGHFSLGMLCLGFSQQA*RWWDVR
Trigger: CCTCACATCCCACCATCTCCATGCCTGTTGAGAGAA...CCCCAAGCACAGCATTCCAAGAGAGAAGTGCCCAAATTCCAACTTTCTGGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp AAGAAACCTCGAAAGCAAAAACTGGAGTGCAGTAGCAGCAGCAGCCTCCCTGGGCCCTTAGCCAAAGGTTaGCCACCTCCTTTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: KKPRKQKLECSSSSSLPGPLAKG*PPPFSL
Trigger: AAGAGAAAAAGGAGGTGGCCAACCTTTGGCTAAGGG...CCCAGGGAGGCTGCTGCTGCTACTGCACTCCAGTTTTTGCTTTCGAGGTTTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp TCCCCTTTCTGCACTGGGAGAGAAATAACTCTTACACCTGGGGTGATGATGTACCCAGGCCCTACTCTGTaGTGTGTGACCTTCCAAAGC +
Preference number: 4 (lower is better)
Translates to: SPFCTGREITLTPGVMMYPGPTL*CVTFQS
Trigger: GCTTTGGAAGGTCACACACCACAGAGTAGGGCCTGG...GTACATCATCACCCCAGGTGTAAGAGTTATTTCTCTCCCAGTGCAGAAAGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp CCAATAAAGACATGTAAAAGGAACCCTCTCCTACAGGTGATTAATGAGAGGTTGTCTAGCAACTGGGCCTaGGGGCTGAGGGCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: PIKTCKRNPLLQVINERLSSNWA*GLRAGG
Trigger: CCCACCTGCCCTCAGCCCCCAGGCCCAGTTGCTAGA...CAACCTCTCATTAATCACCTGTAGGAGAGGGTTCCTTTTACATGTCTTTATTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp CTGGTGTTTACTGAACCCATTATCCGGGCAGTCTTGTGGCCTGGTACCCAAGCTTTTGTCTTCAGTACCTaGGCATCTTCTGCTGTCCCT +
Preference number: 4 (lower is better)
Translates to: LVFTEPIIRAVLWPGTQAFVFST*ASSAVP
Trigger: AGGGACAGCAGAAGATGCCCAGGTACTGAAGACAAA...AGCTTGGGTACCAGGCCACAAGACTGCCCGGATAATGGGTTCAGTAAACACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp CTCAGCCCCAGGCCCTACTCTGTGGTGTGTGACCTTCCAAAGCCCAACAAAGTGCCAAAGCCTCTCTTCTaGGAAAATGTCACAATCAAC +
Preference number: 4 (lower is better)
Translates to: LSPRPYSVVCDLPKPNKVPKPLF*ENVTIN
Trigger: GTTGATTGTGACATTTTCCCAGAAGAGAGGCTTTGG...CACTTTGTTGGGCTTTGGAAGGTCACACACCACAGAGTAGGGCCTGGGGCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR CAA 72 bp AAGAGGCCAGAAAGTTGGAATTTGGGCACTTCTCTCTaGGAATGCTGTGCTTGGGGTAAGGAGGGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: KRPESWNLGTSL*ECCAWGKEGLP
Trigger: AGGAAGGCCCTCCTTACCCCAAGCACAGCATTCCAAGAGAGAAGTGCCCAAATTCCAACTTTCTGGCCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR TCA 90 bp TCTGTTCCCAAGCTAAATTGCCATATCTCAGGAATGGCAAGAACCCTGTTGACTAGTGGTGGGGAAAGCTaGGGTAATTCCCCGGTGGGA +
Preference number: 4 (lower is better)
Translates to: SVPKLNCHISGMARTLLTSGGES*GNSPVG
Trigger: TCCCACCGGGGAATTACCTCAGCTTTCCCCACCACT...AGTCAACAGGGTTCTTGCCATTCCTGAGATATGGCAATTTAGCTTGGGAACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR TCA 90 bp CTTGCTGGCTGTGATAAATGGACCCTCATTTTCTATCTTTCCCCTACACTCCACGAGCTCAAGCTGCCCTaGAAGAAGAGGCAAGAGGTG +
Preference number: 4 (lower is better)
Translates to: LAGCDKWTLIFYLSPTLHELKLP*KKRQEV
Trigger: CACCTCTTGCCTCTTCTTTCAGGGCAGCTTGAGCTC...GTGGAGTGTAGGGGAAAGATAGAAAATGAGGGTCCATTTATCACAGCCAGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR GCA 90 bp TCTGTTCCCAAGCTAAATTGCCATATCTCAGGAATGGCAAGAACCCTGTTGACTGGCCCCCAGAGGCCATaGTGTCTGTCATACTGTCCA +
Preference number: 4 (lower is better)
Translates to: SVPKLNCHISGMARTLLTGPQRP*CLSYCP
Trigger: TGGACAGTATGACAGACAGCATGGCCTCTGGGGGCC...AGTCAACAGGGTTCTTGCCATTCCTGAGATATGGCAATTTAGCTTGGGAACAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR GCA 90 bp TCTGTTCCCAAGCTAAATTGCCATATCTCAGGAATGGCAAGAACCCTGTTGACTCATCTCCAGGGTCTCTaGAGTGTCGAGAGAGCGGCT +
Preference number: 4 (lower is better)
Translates to: SVPKLNCHISGMARTLLTHLQGL*SVERAA
Trigger: AGCCGCTCTCTCGACACTGCAGAGACCCTGGAGATG...AGTCAACAGGGTTCTTGCCATTCCTGAGATATGGCAATTTAGCTTGGGAACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR GCA 90 bp TCTGTTCCCAAGCTAAATTGCCATATCTCAGGAATGGCAAGAACCCTGTTGACTTCTTCCTGCTGGGCCTaGAGCTCATCAGACTCGAGG +
Preference number: 4 (lower is better)
Translates to: SVPKLNCHISGMARTLLTSSCWA*SSSDSR
Trigger: CCTCGAGTCTGATGAGCTGCAGGCCCAGCAGGAAGA...AGTCAACAGGGTTCTTGCCATTCCTGAGATATGGCAATTTAGCTTGGGAACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR GCA 90 bp TCTGGGGTGTATTTGCTGCCACCCAAGCCAGCACTAGTCTGTGTTTGGAAACAGGGCCAAGAAACAGTTTaGCCACAAAGTCACCTTGAC +
Preference number: 4 (lower is better)
Translates to: SGVYLLPPKPALVCVWKQGQETV*PQSHLD
Trigger: GTCAAGGTGACTTTGTGGGCAAACTGTTTCTTGGCC...CTGTTTCCAAACACAGACTAGTGCTGGCTTGGGTGGCAGCAAATACACCCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp GGATGGGCAAGGCTTAAGGAACATTTTGTGTTGGGAGGCTTGAGAAGGGAGTTTTCACTCAGGCCATCGTaGGTCTTGCTCTTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: GWARLKEHFVLGGLRREFSLRPS*VLLLLR
Trigger: TCTCAGCAAGAGCAAGACCCACGATGGCCTGAGTGA...AAACTCCCTTCTCAAGCCTCCCAACACAAAATGTTCCTTAAGCCTTGCCCATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp TCCCCTTTCTGCACTGGGAGAGAAATAACTCTTACACCTGGGGTGATGATGTACGCAGTCATCTCCAGGTaGAGAGTTCTCAAGGCTGTC +
Preference number: 4 (lower is better)
Translates to: SPFCTGREITLTPGVMMYAVISR*RVLKAV
Trigger: GACAGCCTTGAGAACTCTCCACCTGGAGATGACTGC...GTACATCATCACCCCAGGTGTAAGAGTTATTTCTCTCCCAGTGCAGAAAGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp GGATGGAGAAGAGGAAGCTCAGGTACAGCCAGGGGCCACACTCCCCTTTCTGCATACTTTGATCTTTCTTaGAGCAGGTTCCTTCATAAC +
Preference number: 4 (lower is better)
Translates to: GWRRGSSGTARGHTPLSAYFDLS*SRFLHN
Trigger: GTTATGAAGGAACCTGCTCCAAGAAAGATCAAAGTA...TGCAGAAAGGGGAGTGTGGCCCCTGGCTGTACCTGAGCTTCCTCTTCTCCATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp CTTGCTGGCTGTGATAAATGGACCCTCATTTTCTATCTTTCCCCTACACTCCACTATAGCAAGGGCCCATaGGCAGGTGTAGGTGTGAGG +
Preference number: 4 (lower is better)
Translates to: LAGCDKWTLIFYLSPTLHYSKGP*AGVGVR
Trigger: CCTCACACCTACACCTGCCCATGGGCCCTTGCTATA...GTGGAGTGTAGGGGAAAGATAGAAAATGAGGGTCCATTTATCACAGCCAGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp CTTGCTGGCTGTGATAAATGGACCCTCATTTTCTATCTTTCCCCTACACTCCACTTCTCCAGCAGGGTCTaGAGGCTGGTGATGGCTCTA +
Preference number: 4 (lower is better)
Translates to: LAGCDKWTLIFYLSPTLHFSSRV*RLVMAL
Trigger: TAGAGCCATCACCAGCCTCCAGACCCTGCTGGAGAA...GTGGAGTGTAGGGGAAAGATAGAAAATGAGGGTCCATTTATCACAGCCAGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp CCAATAAAGACATGTAAAAGGAACCCTCTCCTACAGGTGATTAATGAGAGGTTGCTGGCATCCTGGCCCTaGGAGAGGCCTACTAGGTGG +
Preference number: 4 (lower is better)
Translates to: PIKTCKRNPLLQVINERLLASWP*ERPTRW
Trigger: CCACCTAGTAGGCCTCTCCCAGGGCCAGGATGCCAG...CAACCTCTCATTAATCACCTGTAGGAGAGGGTTCCTTTTACATGTCTTTATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp GGATGGAGAAGAGGAAGCTCAGGTACAGCCAGGGGCCACACTCCCCTTTCTGCAGTGGATTTTCTTCTTTaGAGTGACTATAGGATTGGA +
Preference number: 4 (lower is better)
Translates to: GWRRGSSGTARGHTPLSAVDFLL*SDYRIG
Trigger: TCCAATCCTATAGTCACTCCAAAGAAGAAAATCCAC...TGCAGAAAGGGGAGTGTGGCCCCTGGCTGTACCTGAGCTTCCTCTTCTCCATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR TCA 90 bp TCTGGGGTGTATTTGCTGCCACCCAAGCCAGCACTAGTCTGTGTTTGGAAACAGCAATCTGAGAAATGGTaGCAAAGACCAGCATGGACA +
Preference number: 4 (lower is better)
Translates to: SGVYLLPPKPALVCVWKQQSEKW*QRPAWT
Trigger: TGTCCATGCTGGTCTTTGTCACCATTTCTCAGATTG...CTGTTTCCAAACACAGACTAGTGCTGGCTTGGGTGGCAGCAAATACACCCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR TCA 90 bp TCCTCACCCTCTTTCATTCTCCAGCTCCACAACAGATACATTTCTTCACAATGTGTTTGGAAACAGGCCTaGAGCTTGGCTGGCTCTCCC +
Preference number: 4 (lower is better)
Translates to: SSPSFILQLHNRYISSQCVWKQA*SLAGSP
Trigger: GGGAGAGCCAGCCAAGCTTCAGGCCTGTTTCCAAAC...ACATTGTGAAGAAATGTATCTGTTGTGGAGCTGGAGAATGAAAGAGGGTGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR GCA 90 bp GCACAAAATTACAGCATCCCAAACCCAGCGTGGGTCACAAGAAGAAACCTCGAATGGCATAGGCTTCCCTaGCATAAGCCTCTCGAGTAT +
Preference number: 4 (lower is better)
Translates to: AQNYSIPNPAWVTRRNLEWHRLP*HKPLEY
Trigger: ATACTCGAGAGGCTTATGGCAGGGAAGCCTATGCCA...TTCGAGGTTTCTTCTTGTGACCCACGCTGGGTTTGGGATGCTGTAATTTTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR GCA 90 bp TCCTCACCCTCTTTCATTCTCCAGCTCCACAACAGATACATTTCTTCACAATGTGGCAGTGAAGGGACTTaGAGGCAGCAAGGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: SSPSFILQLHNRYISSQCGSEGT*RQQGCP
Trigger: TGGACAGCCTTGCTGCCTGCAAGTCCCTTCACTGCC...ACATTGTGAAGAAATGTATCTGTTGTGGAGCTGGAGAATGAAAGAGGGTGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp GAGGCCAGAAAGTTGGAATTTGGGCACTTCTCTCTTGGAATGCTGTGCTTGGGGCATTTTCTCAGTAGCTaGTGGAGAAGGTTCTGGTGT +
Preference number: 4 (lower is better)
Translates to: EARKLEFGHFSLGMLCLGHFLSS*WRRFWC
Trigger: ACACCAGAACCTTCTCCACCAGCTACTGAGAAAATG...CCCCAAGCACAGCATTCCAAGAGAGAAGTGCCCAAATTCCAACTTTCTGGCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp GAGGCCAGAAAGTTGGAATTTGGGCACTTCTCTCTTGGAATGCTGTGCTTGGGGGTGAGAAACTCACAGTaGCATTCCCTTCCTTCTCAA +
Preference number: 4 (lower is better)
Translates to: EARKLEFGHFSLGMLCLGVRNSQ*HSLPSQ
Trigger: TTGAGAAGGAAGGGAATGCCACTGTGAGTTTCTCAC...CCCCAAGCACAGCATTCCAAGAGAGAAGTGCCCAAATTCCAACTTTCTGGCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp CTCAGCCCCAGGCCCTACTCTGTGGTGTGTGACCTTCCAAAGCCCAACAAAGTGAGATCTTCATCATTGTaGAACTCAGGATTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: LSPRPYSVVCDLPKPNKVRSSSL*NSGFSS
Trigger: TGAAGAGAATCCTGAGTTCCACAATGATGAAGATCT...CACTTTGTTGGGCTTTGGAAGGTCACACACCACAGAGTAGGGCCTGGGGCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp GCACAAAATTACAGCATCCCAAACCCAGCGTGGGTCACAAGAAGAAACCTCGAAATCCCAAACCCAGCGTaGGTCACAAGAAGAAACCTC +
Preference number: 4 (lower is better)
Translates to: AQNYSIPNPAWVTRRNLEIPNPA*VTRRNL
Trigger: GAGGTTTCTTCTTGTGACCCACGCTGGGTTTGGGAT...TTCGAGGTTTCTTCTTGTGACCCACGCTGGGTTTGGGATGCTGTAATTTTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp CCAATAAAGACATGTAAAAGGAACCCTCTCCTACAGGTGATTAATGAGAGGTTGTCCCAGATAGGCTGGTaGCCCTTCTCCAGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: PIKTCKRNPLLQVINERLSQIGW*PFSSRV
Trigger: GACCCTGCTGGAGAAGGGCCACCAGCCTATCTGGGA...CAACCTCTCATTAATCACCTGTAGGAGAGGGTTCCTTTTACATGTCTTTATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp TCCTCACCCTCTTTCATTCTCCAGCTCCACAACAGATACATTTCTTCACAATGTGGCCTGAAGCTTGGCTaGCTCTCCCAATGTCACCCT +
Preference number: 4 (lower is better)
Translates to: SSPSFILQLHNRYISSQCGLKLG*LSQCHP
Trigger: AGGGTGACATTGGGAGAGCCAGCCAAGCTTCAGGCC...ACATTGTGAAGAAATGTATCTGTTGTGGAGCTGGAGAATGAAAGAGGGTGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp TCCTCACCCTCTTTCATTCTCCAGCTCCACAACAGATACATTTCTTCACAATGTCTGCTGTCCCTATCATaGGGGGAGGGAACGGACAGT +
Preference number: 4 (lower is better)
Translates to: SSPSFILQLHNRYISSQCLLSLS*GEGTDS
Trigger: ACTGTCCGTTCCCTCCCCCCATGATAGGGACAGCAG...ACATTGTGAAGAAATGTATCTGTTGTGGAGCTGGAGAATGAAAGAGGGTGAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp GGATGGGCAAGGCTTAAGGAACATTTTGTGTTGGGAGGCTTGAGAAGGGAGTTTCCCTTCCTTCCCCATTaGGTGGAGAATGTTCCCAAA +
Preference number: 4 (lower is better)
Translates to: GWARLKEHFVLGGLRREFPFLPH*VENVPK
Trigger: TTTGGGAACATTCTCCACCCAATGGGGAAGGAAGGG...AAACTCCCTTCTCAAGCCTCCCAACACAAAATGTTCCTTAAGCCTTGCCCATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp CTTGCTGGCTGTGATAAATGGACCCTCATTTTCTATCTTTCCCCTACACTCCACTCTCCCACAGCTTCTTaGGGAAAGGGGACATGGTTG +
Preference number: 4 (lower is better)
Translates to: LAGCDKWTLIFYLSPTLHSPTAS*GKGTWL
Trigger: CAACCATGTCCCCTTTCCCCAAGAAGCTGTGGGAGA...GTGGAGTGTAGGGGAAAGATAGAAAATGAGGGTCCATTTATCACAGCCAGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR TCA 90 bp TCTGTTCCCAAGCTAAATTGCCATATCTCAGGAATGGCAAGAACCCTGTTGACTACCTTGCTCTTCCGGTaGCGGCGGATACTGCTAAAA +
Preference number: 4 (lower is better)
Translates to: SVPKLNCHISGMARTLLTTLLFR*RRILLK
Trigger: TTTTAGCAGTATCCGCCGTCACCGGAAGAGCAAGGT...AGTCAACAGGGTTCTTGCCATTCCTGAGATATGGCAATTTAGCTTGGGAACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR TCA 90 bp TGCATGCTATATATGTGTGTGCATGTGTGTTTGTGTGTGTGTGTGTATGTATGTGAGGGACGAGCTAGTTaGGGCCCAGATTCCCCAGGT +
Preference number: 4 (lower is better)
Translates to: CMLYMCVHVCLCVCVYVCEGRAS*GPDSPG
Trigger: ACCTGGGGAATCTGGGCCTCAACTAGCTCGTCCCTC...ACATACATACACACACACACACAAACACACATGCACACACATATATAGCATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR TCA 90 bp TGCATGCTATATATGTGTGTGCATGTGTGTTTGTGTGTGTGTGTGTATGTATGTGTAGAGGGCTGGGGCTaGAGCCTCCAGAACTGGAAG +
Preference number: 4 (lower is better)
Translates to: CMLYMCVHVCLCVCVYVCVEGWG*SLQNWK
Trigger: CTTCCAGTTCTGGAGGCTTCAGCCCCAGCCCTCTAC...ACATACATACACACACACACACAAACACACATGCACACACATATATAGCATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR TCA 90 bp TCTGTTCCCAAGCTAAATTGCCATATCTCAGGAATGGCAAGAACCCTGTTGACTCTGGGCAGATGCACTTaGGTTGAACGTGGCCATAGA +
Preference number: 4 (lower is better)
Translates to: SVPKLNCHISGMARTLLTLGRCT*VERGHR
Trigger: TCTATGGCCACGTTCAACTCAAGTGCATCTGCCCAG...AGTCAACAGGGTTCTTGCCATTCCTGAGATATGGCAATTTAGCTTGGGAACAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR TCA 90 bp CAGGTGATTAATGAGAGGTTGAGCTTGGCAAGATTAGCCTGTTCCAATGTCTTCCACAGCGATAGGCTGTaGGACACACGCTACTTGATC +
Preference number: 4 (lower is better)
Translates to: QVINERLSLARLACSNVFHSDRL*DTRYLI
Trigger: GATCAAGTAGCGTGTGTCTCACAGCCTATCGCTGTG...GAAGACATTGGAACAGGCTAATCTTGCCAAGCTCAACCTCTCATTAATCACCTG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR TCA 90 bp CTATTGGGTAATAAGATGAAGGCAGCTACTTCCACTAAGTCCCATTTTCCCTTAGCCCCCATCTGGTCATaGTGCCAAAGTCCACAGCGA +
Preference number: 4 (lower is better)
Translates to: LLGNKMKAATSTKSHFPLAPIWS*CQSPQR
Trigger: TCGCTGTGGACTTTGGCATCATGACCAGATGGGGGC...TAAGGGAAAATGGGACTTAGTGGAAGTAGCTGCCTTCATCTTATTACCCAATAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR GCA 90 bp TGCATGCTATATATGTGTGTGCATGTGTGTTTGTGTGTGTGTGTGTATGTATGTGCCCCTGGCTCACTTTaGTCAGCCCCAGTGACCTTG +
Preference number: 4 (lower is better)
Translates to: CMLYMCVHVCLCVCVYVCAPGSL*SAPVTL
Trigger: CAAGGTCACTGGGGCTGAGCAAAGTGAGCCAGGGGC...ACATACATACACACACACACACAAACACACATGCACACACATATATAGCATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR GCA 90 bp CTTGCTGGCTGTGATAAATGGACCCTCATTTTCTATCTTTCCCCTACACTCCACGATTCTCTTCACACTTaGCTTCCCCATCCCGTTCCA +
Preference number: 4 (lower is better)
Translates to: LAGCDKWTLIFYLSPTLHDSLHT*LPHPVP
Trigger: TGGAACGGGATGGGGAAGGCAAGTGTGAAGAGAATC...GTGGAGTGTAGGGGAAAGATAGAAAATGAGGGTCCATTTATCACAGCCAGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR GCA 90 bp CTTGCTGGCTGTGATAAATGGACCCTCATTTTCTATCTTTCCCCTACACTCCACTGCAAATTCATGTGGTaGTTCCAGGGGTGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: LAGCDKWTLIFYLSPTLHCKFMW*FQGCSF
Trigger: GAAGCTGCACCCCTGGAAGCACCACATGAATTTGCA...GTGGAGTGTAGGGGAAAGATAGAAAATGAGGGTCCATTTATCACAGCCAGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR GCA 90 bp TCCTCACCCTCTTTCATTCTCCAGCTCCACAACAGATACATTTCTTCACAATGTCTTCCTCCCCTAGGCTaGCATTGGGTTTCAGCCACA +
Preference number: 4 (lower is better)
Translates to: SSPSFILQLHNRYISSQCLPPLG*HWVSAT
Trigger: TGTGGCTGAAACCCAATGGCAGCCTAGGGGAGGAAG...ACATTGTGAAGAAATGTATCTGTTGTGGAGCTGGAGAATGAAAGAGGGTGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR GCA 90 bp CCCTTTCTTGCTGGCTGTGATAAATGGACCCTCATTTTCTATCTTTCCCCTACATGGGCCCCAAGGCAGTaGTTCCTTGGAGACTCTAAA +
Preference number: 4 (lower is better)
Translates to: PFLAGCDKWTLIFYLSPTWAPRQ*FLGDSK
Trigger: TTTAGAGTCTCCAAGGAAGCACTGCCTTGGGGCCCA...TGTAGGGGAAAGATAGAAAATGAGGGTCCATTTATCACAGCCAGCAAGAAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp CACATGAGTACTCTCAGAGGGTCTAGACATGGGGAAGAAGGGTTCAAAAGAAAGTCCTTTCTAGGGGCTTaGAAGGTCTCCTCAAAGCAG +
Preference number: 4 (lower is better)
Translates to: HMSTLRGSRHGEEGFKRKSFLGA*KVSSKQ
Trigger: CTGCTTTGAGGAGACCTTCCAAGCCCCTAGAAAGGA...CTTTCTTTTGAACCCTTCTTCCCCATGTCTAGACCCTCTGAGAGTACTCATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp GGATGGGCAAGGCTTAAGGAACATTTTGTGTTGGGAGGCTTGAGAAGGGAGTTTTTTCTCAGTAGCTGGTaGAGAAGGTTCTGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: GWARLKEHFVLGGLRREFFLSSW*RRFWCW
Trigger: CCAACACCAGAACCTTCTCCACCAGCTACTGAGAAA...AAACTCCCTTCTCAAGCCTCCCAACACAAAATGTTCCTTAAGCCTTGCCCATCC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp GGACATGATATCAACAGTTTTAGTGGTCTGGGGTGTATTTGCTGCCACCCAAGCGGCCGTGGATACATTTaGGCAGTTTCCCACAGATAT +
Preference number: 4 (lower is better)
Translates to: GHDINSFSGLGCICCHPSGRGYI*AVSHRY
Trigger: ATATCTGTGGGAAACTGCCCAAATGTATCCACGGCC...GCTTGGGTGGCAGCAAATACACCCCAGACCACTAAAACTGTTGATATCATGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp GGACATGATATCAACAGTTTTAGTGGTCTGGGGTGTATTTGCTGCCACCCAAGCAACCTTCATCACTATTaGGGGCGGATTCTTGCTGGT +
Preference number: 4 (lower is better)
Translates to: GHDINSFSGLGCICCHPSNLHHY*GRILAG
Trigger: ACCAGCAAGAATCCGCCCCCAATAGTGATGAAGGTT...GCTTGGGTGGCAGCAAATACACCCCAGACCACTAAAACTGTTGATATCATGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp GGACATGATATCAACAGTTTTAGTGGTCTGGGGTGTATTTGCTGCCACCCAAGCGAGGCAATGCAGACTTaGCTGCTAATCAGTGGTTCA +
Preference number: 4 (lower is better)
Translates to: GHDINSFSGLGCICCHPSEAMQT*LLISGS
Trigger: TGAACCACTGATTAGCAGCCAAGTCTGCATTGCCTC...GCTTGGGTGGCAGCAAATACACCCCAGACCACTAAAACTGTTGATATCATGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp GCACAAAATTACAGCATCCCAAACCCAGCGTGGGTCACAAGAAGAAACCTCGAAGAGCTCAACACTCTATaGCAGTGTCCACAACAGAAC +
Preference number: 4 (lower is better)
Translates to: AQNYSIPNPAWVTRRNLEELNTL*QCPQQN
Trigger: GTTCTGTTGTGGACACTGCCATAGAGTGTTGAGCTC...TTCGAGGTTTCTTCTTGTGACCCACGCTGGGTTTGGGATGCTGTAATTTTGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp GAGGCCAGAAAGTTGGAATTTGGGCACTTCTCTCTTGGAATGCTGTGCTTGGGGACCTTAAGCTCTGCATaGTCTGAAATCCCCTTTCTT +
Preference number: 4 (lower is better)
Translates to: EARKLEFGHFSLGMLCLGTLSSA*SEIPFL
Trigger: AAGAAAGGGGATTTCAGACCATGCAGAGCTTAAGGT...CCCCAAGCACAGCATTCCAAGAGAGAAGTGCCCAAATTCCAACTTTCTGGCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp CCAATAAAGACATGTAAAAGGAACCCTCTCCTACAGGTGATTAATGAGAGGTTGACCGCCTGCTGTGGCTaGCACAGTCCACATGTAGAC +
Preference number: 4 (lower is better)
Translates to: PIKTCKRNPLLQVINERLTACCG*HSPHVD
Trigger: GTCTACATGTGGACTGTGCCAGCCACAGCAGGCGGT...CAACCTCTCATTAATCACCTGTAGGAGAGGGTTCCTTTTACATGTCTTTATTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp CCCTTATCTCAATTAAAAGACCGTGTTCCTTGTGATGAGATTATGAAAATTTCCCCTCCCTCTAGCAACTaGGCCTGGGGGCTGAGGGCA +
Preference number: 4 (lower is better)
Translates to: PLSQLKDRVPCDEIMKISPPSSN*AWGLRA
Trigger: TGCCCTCAGCCCCCAGGCCCAGTTGCTAGAGGGAGG...GGAAATTTTCATAATCTCATCACAAGGAACACGGTCTTTTAATTGAGATAAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp CTGGTGTTTACTGAACCCATTATCCGGGCAGTCTTGTGGCCTGGTACCCAAGCTCCCAAAATGCTCCTTTaGAGAAACTCAACAAGACAA +
Preference number: 4 (lower is better)
Translates to: LVFTEPIIRAVLWPGTQAPKMLL*RNSTRQ
Trigger: TTGTCTTGTTGAGTTTCTCCAAAGGAGCATTTTGGG...AGCTTGGGTACCAGGCCACAAGACTGCCCGGATAATGGGTTCAGTAAACACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR TCA 90 bp GGATGGGCAAGGCTTAAGGAACATTTTGTGTTGGGAGGCTTGAGAAGGGAGTTTGTTTTGAGTGAAAGATaGGTCAGAGTCAGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: GWARLKEHFVLGGLRREFVLSER*VRVRAA
Trigger: TGCAGCTCTGACTCTGACTCATCTTTCACTCAAAAC...AAACTCCCTTCTCAAGCCTCCCAACACAAAATGTTCCTTAAGCCTTGCCCATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR TCA 90 bp CCAATAAAGACATGTAAAAGGAACCCTCTCCTACAGGTGATTAATGAGAGGTTGCTTCTGCCCAACCCCTaGTCCCCATTCACATGCTCA +
Preference number: 4 (lower is better)
Translates to: PIKTCKRNPLLQVINERLLLPNP*SPFTCS
Trigger: TGAGCATGTGAATGGGGATCAGGGGTTGGGCAGAAG...CAACCTCTCATTAATCACCTGTAGGAGAGGGTTCCTTTTACATGTCTTTATTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR TCA 90 bp GGATGGGCAAGGCTTAAGGAACATTTTGTGTTGGGAGGCTTGAGAAGGGAGTTTGTGGGAAAACCAAGGTaGAAACTCACAGGAGTTTTC +
Preference number: 4 (lower is better)
Translates to: GWARLKEHFVLGGLRREFVGKPR*KLTGVF
Trigger: GAAAACTCCTGTGAGTTTTCACCTTGGTTTTCCCAC...AAACTCCCTTCTCAAGCCTCCCAACACAAAATGTTCCTTAAGCCTTGCCCATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR TCA 90 bp CTTGCTGGCTGTGATAAATGGACCCTCATTTTCTATCTTTCCCCTACACTCCACTTGTGTTGGGAGGCTTaGGAAGGGAGTTTTCCCTTT +
Preference number: 4 (lower is better)
Translates to: LAGCDKWTLIFYLSPTLHLCWEA*EGSFPF
Trigger: AAAGGGAAAACTCCCTTCTCAAGCCTCCCAACACAA...GTGGAGTGTAGGGGAAAGATAGAAAATGAGGGTCCATTTATCACAGCCAGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR TCA 90 bp TCCCCTTTCTGCACTGGGAGAGAAATAACTCTTACACCTGGGGTGATGATGTACATTACAGAGTCCAAATaGTGGGATGGGCAAGGCTTA +
Preference number: 4 (lower is better)
Translates to: SPFCTGREITLTPGVMMYITESK*WDGQGL
Trigger: TAAGCCTTGCCCATCCCATCATTTGGACTCTGTAAT...GTACATCATCACCCCAGGTGTAAGAGTTATTTCTCTCCCAGTGCAGAAAGGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR TCA 90 bp CCAATAAAGACATGTAAAAGGAACCCTCTCCTACAGGTGATTAATGAGAGGTTGGGAGATGGTGGGATGTaGGGGCGAGGGTGCAATAAT +
Preference number: 4 (lower is better)
Translates to: PIKTCKRNPLLQVINERLGDGGM*GRGCNN
Trigger: ATTATTGCACCCTCGCCCTCACATCCCACCATCTCC...CAACCTCTCATTAATCACCTGTAGGAGAGGGTTCCTTTTACATGTCTTTATTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR GCA 90 bp GGACATGATATCAACAGTTTTAGTGGTCTGGGGTGTATTTGCTGCCACCCAAGCCTTGGCTCCTTTTTCTaGTGTTTGTTCACGGGTACT +
Preference number: 4 (lower is better)
Translates to: GHDINSFSGLGCICCHPSLGSFF*CLFTGT
Trigger: AGTACCCGTGAACAAACAGCAGAAAAAGGAGCCAAG...GCTTGGGTGGCAGCAAATACACCCCAGACCACTAAAACTGTTGATATCATGTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR GCA 90 bp TCTGTTCCCAAGCTAAATTGCCATATCTCAGGAATGGCAAGAACCCTGTTGACTGAGATGCCAGCCCTCTaGACAAGCAGCAGCAATTTT +
Preference number: 4 (lower is better)
Translates to: SVPKLNCHISGMARTLLTEMPAL*TSSSNF
Trigger: AAAATTGCTGCTGCTTGTGCAGAGGGCTGGCATCTC...AGTCAACAGGGTTCTTGCCATTCCTGAGATATGGCAATTTAGCTTGGGAACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR GCA 90 bp CTATTGGGTAATAAGATGAAGGCAGCTACTTCCACTAAGTCCCATTTTCCCTTACCTAGGCAGTTGAGATaGCAGCCCTCTGCACAAGCA +
Preference number: 4 (lower is better)
Translates to: LLGNKMKAATSTKSHFPLPRQLR*QPSAQA
Trigger: TGCTTGTGCAGAGGGCTGGCATCTCAACTGCCTAGG...TAAGGGAAAATGGGACTTAGTGGAAGTAGCTGCCTTCATCTTATTACCCAATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp CCCCAAGCGGGAGGCAATGCAGACTTGGCTGCTAATCAGTGGTTCATCATTCATCAAATCCAGGTGTGGTaGAGTCATAATAACCTTCAT +
Preference number: 4 (lower is better)
Translates to: PQAGGNADLAANQWFIIHQIQVW*SHNNLH
Trigger: ATGAAGGTTATTATGACTCCACCACACCTGGATTTG...ATGAATGATGAACCACTGATTAGCAGCCAAGTCTGCATTGCCTCCCGCTTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp GGACATGATATCAACAGTTTTAGTGGTCTGGGGTGTATTTGCTGCCACCCAAGCACAACTGTTTCTGGATaGTCACTAGCCGTTCTTCCT +
Preference number: 4 (lower is better)
Translates to: GHDINSFSGLGCICCHPSTTVSG*SLAVLP
Trigger: AGGAAGAACGGCTAGTGACCATCCAGAAACAGTTGT...GCTTGGGTGGCAGCAAATACACCCCAGACCACTAAAACTGTTGATATCATGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp CACATGAGTACTCTCAGAGGGTCTAGACATGGGGAAGAAGGGTTCAAAAGAAAGTGTCTGGCTCAAACATaGCATCACTCTGGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: HMSTLRGSRHGEEGFKRKCLAQT*HHSGRA
Trigger: AGCTCTTCCAGAGTGATGCCATGTTTGAGCCAGACA...CTTTCTTTTGAACCCTTCTTCCCCATGTCTAGACCCTCTGAGAGTACTCATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp GGATGGGCAAGGCTTAAGGAACATTTTGTGTTGGGAGGCTTGAGAAGGGAGTTTTGCTTCTTGCATGTCTaGCTCAAACATGGCATCACT +
Preference number: 4 (lower is better)
Translates to: GWARLKEHFVLGGLRREFCFLHV*LKHGIT
Trigger: AGTGATGCCATGTTTGAGCCAGACATGCAAGAAGCA...AAACTCCCTTCTCAAGCCTCCCAACACAAAATGTTCCTTAAGCCTTGCCCATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp TGCATGCTATATATGTGTGTGCATGTGTGTTTGTGTGTGTGTGTGTATGTATGTGCCTGTCCAACTGGTTaGGGCTTATCCAGGCAGGAC +
Preference number: 4 (lower is better)
Translates to: CMLYMCVHVCLCVCVYVCACPTG*GLSRQD
Trigger: GTCCTGCCTGGATAAGCCCCAACCAGTTGGACAGGC...ACATACATACACACACACACACAAACACACATGCACACACATATATAGCATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp CTATTGGGTAATAAGATGAAGGCAGCTACTTCCACTAAGTCCCATTTTCCCTTACAGTGGAGGAGTAGCTaGTGGCAAGAGAGGCACCTT +
Preference number: 4 (lower is better)
Translates to: LLGNKMKAATSTKSHFPLQWRSS*WQERHL
Trigger: AAGGTGCCTCTCTTGCCACCAGCTACTCCTCCACTG...TAAGGGAAAATGGGACTTAGTGGAAGTAGCTGCCTTCATCTTATTACCCAATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp CCCTTTCTTGCTGGCTGTGATAAATGGACCCTCATTTTCTATCTTTCCCCTACATGGGCACTTCTCTCTTaGAATGCTGTGCTTGGGGTA +
Preference number: 4 (lower is better)
Translates to: PFLAGCDKWTLIFYLSPTWALLS*NAVLGV
Trigger: TACCCCAAGCACAGCATTCCAAGAGAGAAGTGCCCA...TGTAGGGGAAAGATAGAAAATGAGGGTCCATTTATCACAGCCAGCAAGAAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp TGCATGCTATATATGTGTGTGCATGTGTGTTTGTGTGTGTGTGTGTATGTATGTTCTTCCCAGATAGGCTaGTGGCCCTTCTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: CMLYMCVHVCLCVCVYVCSSQIG*WPFSSR
Trigger: CCTGCTGGAGAAGGGCCACCAGCCTATCTGGGAAGA...ACATACATACACACACACACACAAACACACATGCACACACATATATAGCATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp CACATGAGTACTCTCAGAGGGTCTAGACATGGGGAAGAAGGGTTCAAAAGAAAGAGGACCAGTCTCATCTaGGAATTCTCAGGATCACAG +
Preference number: 4 (lower is better)
Translates to: HMSTLRGSRHGEEGFKRKRTSLI*EFSGSQ
Trigger: CTGTGATCCTGAGAATTCCCAGATGAGACTGGTCCT...CTTTCTTTTGAACCCTTCTTCCCCATGTCTAGACCCTCTGAGAGTACTCATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp CAGGTGATTAATGAGAGGTTGAGCTTGGCAAGATTAGCCTGTTCCAATGTCTTCGAGAGGCCTACTAGGTaGCCTTCTCTATCCACATTC +
Preference number: 4 (lower is better)
Translates to: QVINERLSLARLACSNVFERPTR*PSLSTF
Trigger: GAATGTGGATAGAGAAGGCCACCTAGTAGGCCTCTC...GAAGACATTGGAACAGGCTAATCTTGCCAAGCTCAACCTCTCATTAATCACCTG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR TCA 90 bp CCCTTATCTCAATTAAAAGACCGTGTTCCTTGTGATGAGATTATGAAAATTTCCGCCCCATGGGCACTCTaGGAGCTGGGAAATTGGCAG +
Preference number: 4 (lower is better)
Translates to: PLSQLKDRVPCDEIMKISAPWAL*ELGNWQ
Trigger: CTGCCAATTTCCCAGCTCTCAGAGTGCCCATGGGGC...GGAAATTTTCATAATCTCATCACAAGGAACACGGTCTTTTAATTGAGATAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR TCA 90 bp CCCTTTCTTGCTGGCTGTGATAAATGGACCCTCATTTTCTATCTTTCCCCTACACAGGGAGGTTTTGAGTaGAAGATGAGTCAGAGTCAG +
Preference number: 4 (lower is better)
Translates to: PFLAGCDKWTLIFYLSPTQGGFE*KMSQSQ
Trigger: CTGACTCTGACTCATCTTTCACTCAAAACCTCCCTG...TGTAGGGGAAAGATAGAAAATGAGGGTCCATTTATCACAGCCAGCAAGAAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR TCA 90 bp TCCCCTTTCTGCACTGGGAGAGAAATAACTCTTACACCTGGGGTGATGATGTACCAACCTAGTTTAACATaGAAACTGCATGGATGCAGG +
Preference number: 4 (lower is better)
Translates to: SPFCTGREITLTPGVMMYQPSLT*KLHGCR
Trigger: CCTGCATCCATGCAGTTTTCATGTTAAACTAGGTTG...GTACATCATCACCCCAGGTGTAAGAGTTATTTCTCTCCCAGTGCAGAAAGGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR GCA 90 bp CAGGTGATTAATGAGAGGTTGAGCTTGGCAAGATTAGCCTGTTCCAATGTCTTCGGCTTCCAAGGAGGCTaGAAGATCTTCATCATTGTG +
Preference number: 4 (lower is better)
Translates to: QVINERLSLARLACSNVFGFQGG*KIFIIV
Trigger: CACAATGATGAAGATCTTGCAGCCTCCTTGGAAGCC...GAAGACATTGGAACAGGCTAATCTTGCCAAGCTCAACCTCTCATTAATCACCTG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR GCA 90 bp TCCTCACCCTCTTTCATTCTCCAGCTCCACAACAGATACATTTCTTCACAATGTATGCAACAGGTTGCCTaGCTATATGGAGACTGGCTG +
Preference number: 4 (lower is better)
Translates to: SSPSFILQLHNRYISSQCMQQVA*LYGDWL
Trigger: CAGCCAGTCTCCATATAGGCAGGCAACCTGTTGCAT...ACATTGTGAAGAAATGTATCTGTTGTGGAGCTGGAGAATGAAAGAGGGTGAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR GCA 90 bp GAGGCCAGAAAGTTGGAATTTGGGCACTTCTCTCTTGGAATGCTGTGCTTGGGGAAGCCTAATTTAGGTTaGTTCTCTTCCCTTATCTCA +
Preference number: 4 (lower is better)
Translates to: EARKLEFGHFSLGMLCLGKPNLG*FSSLIS
Trigger: TGAGATAAGGGAAGAGAAGCAACCTAAATTAGGCTT...CCCCAAGCACAGCATTCCAAGAGAGAAGTGCCCAAATTCCAACTTTCTGGCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR GCA 90 bp GGACATGATATCAACAGTTTTAGTGGTCTGGGGTGTATTTGCTGCCACCCAAGCAAATTCAAAGGAACCTaGTTCTGCAGCCACATATCC +
Preference number: 4 (lower is better)
Translates to: GHDINSFSGLGCICCHPSKFKGT*FCSHIS
Trigger: GGATATGTGGCTGCAGAAGCAGGTTCCTTTGAATTT...GCTTGGGTGGCAGCAAATACACCCCAGACCACTAAAACTGTTGATATCATGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR GCA 90 bp CAGGTGATTAATGAGAGGTTGAGCTTGGCAAGATTAGCCTGTTCCAATGTCTTCCCACACTCCCCTTTCTaGACTGGGAGAGAAATAACT +
Preference number: 4 (lower is better)
Translates to: QVINERLSLARLACSNVFPHSPF*TGREIT
Trigger: AGTTATTTCTCTCCCAGTGCAGAAAGGGGAGTGTGG...GAAGACATTGGAACAGGCTAATCTTGCCAAGCTCAACCTCTCATTAATCACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp CTTGCTGGCTGTGATAAATGGACCCTCATTTTCTATCTTTCCCCTACACTCCACGTTCATATTGGGCCGTaGATACATTTGGGCAGTTTC +
Preference number: 4 (lower is better)
Translates to: LAGCDKWTLIFYLSPTLHVHIGP*IHLGSF
Trigger: GAAACTGCCCAAATGTATCCACGGCCCAATATGAAC...GTGGAGTGTAGGGGAAAGATAGAAAATGAGGGTCCATTTATCACAGCCAGCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp GGATGGGCAAGGCTTAAGGAACATTTTGTGTTGGGAGGCTTGAGAAGGGAGTTTCCTCAAATCCAGGTGTaGTGGAGTCATAATAACCTT +
Preference number: 4 (lower is better)
Translates to: GWARLKEHFVLGGLRREFPQIQV*WSHNNL
Trigger: AAGGTTATTATGACTCCACCACACCTGGATTTGAGG...AAACTCCCTTCTCAAGCCTCCCAACACAAAATGTTCCTTAAGCCTTGCCCATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp CTATTGGGTAATAAGATGAAGGCAGCTACTTCCACTAAGTCCCATTTTCCCTTATTTGGTATCCTGTCTTaGGAGTGCAAACCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: LLGNKMKAATSTKSHFPLFGILS*ECKPGA
Trigger: GGCCCCAGGTTTGCACTCCCAAGACAGGATACCAAA...TAAGGGAAAATGGGACTTAGTGGAAGTAGCTGCCTTCATCTTATTACCCAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp CCAATAAAGACATGTAAAAGGAACCCTCTCCTACAGGTGATTAATGAGAGGTTGTTGGAATGCTGTGCTTaGGGTAAGGAGGGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: PIKTCKRNPLLQVINERLLECCA*GKEGLP
Trigger: AGGAAGGCCCTCCTTACCCCAAGCACAGCATTCCAA...CAACCTCTCATTAATCACCTGTAGGAGAGGGTTCCTTTTACATGTCTTTATTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp CAGGTGATTAATGAGAGGTTGAGCTTGGCAAGATTAGCCTGTTCCAATGTCTTCTCTATCCACATTCACTaGTCCTCCAAGGACCAGTCT +
Preference number: 4 (lower is better)
Translates to: QVINERLSLARLACSNVFSIHIH*SSKDQS
Trigger: AGACTGGTCCTTGGAGGACCAGTGAATGTGGATAGA...GAAGACATTGGAACAGGCTAATCTTGCCAAGCTCAACCTCTCATTAATCACCTG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp CCCTTATCTCAATTAAAAGACCGTGTTCCTTGTGATGAGATTATGAAAATTTCCAGGGCTGGCTTGAACTaGGCCCCAAGGCAGTGCTTC +
Preference number: 4 (lower is better)
Translates to: PLSQLKDRVPCDEIMKISRAGLN*APRQCF
Trigger: GAAGCACTGCCTTGGGGCCCAGTTCAAGCCAGCCCT...GGAAATTTTCATAATCTCATCACAAGGAACACGGTCTTTTAATTGAGATAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp CAGGTGATTAATGAGAGGTTGAGCTTGGCAAGATTAGCCTGTTCCAATGTCTTCAGCTACTTCCCTTCTTaGCATAGGACTAAGGAGGGA +
Preference number: 4 (lower is better)
Translates to: QVINERLSLARLACSNVFSYFPS*HRTKEG
Trigger: TCCCTCCTTAGTCCTATGCCAAGAAGGGAAGTAGCT...GAAGACATTGGAACAGGCTAATCTTGCCAAGCTCAACCTCTCATTAATCACCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR CAA 72 bp AACCCTCTCCTACAGGTGATTAATGAGAGGTTGAGCTaGGCAAGATTAGCCTGTTCCAATGTCTTCCTGACA +
Preference number: 4 (lower is better)
Translates to: NPLLQVINERLS*ARLACSNVFLT
Trigger: TGTCAGGAAGACATTGGAACAGGCTAATCTTGCCAAGCTCAACCTCTCATTAATCACCTGTAGGAGAGGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR CAA 72 bp AATTCTCAGGATCACAGCTGTCTGGCACTAGGCCTATaGGGTAATAAGATGAAGGCAGCTACTTCCACTAAG +
Preference number: 4 (lower is better)
Translates to: NSQDHSCLALGL*GNKMKAATSTK
Trigger: CTTAGTGGAAGTAGCTGCCTTCATCTTATTACCCAATAGGCCTAGTGCCAGACAGCTGTGATCCTGAGAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR TCA 90 bp TGCATGCTATATATGTGTGTGCATGTGTGTTTGTGTGTGTGTGTGTATGTATGTGATGATGGGGACAACTaGGGTACGTCCAGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: CMLYMCVHVCLCVCVYVCDDGDN*GTSSWK
Trigger: TTTCCAGCTGGACGTACCTCAGTTGTCCCCATCATC...ACATACATACACACACACACACAAACACACATGCACACACATATATAGCATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR TCA 90 bp GCACAAAATTACAGCATCCCAAACCCAGCGTGGGTCACAAGAAGAAACCTCGAATCCCTTTTAAGAAACTaGGATACCTTAAGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: AQNYSIPNPAWVTRRNLESLLRN*DTLSSA
Trigger: TGCAGAGCTTAAGGTATCTCAGTTTCTTAAAAGGGA...TTCGAGGTTTCTTCTTGTGACCCACGCTGGGTTTGGGATGCTGTAATTTTGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR TCA 90 bp CCAATAAAGACATGTAAAAGGAACCCTCTCCTACAGGTGATTAATGAGAGGTTGCTACTCTGTGGTGTGTaGCCTTCCAAAGCCCAACAA +
Preference number: 4 (lower is better)
Translates to: PIKTCKRNPLLQVINERLLLCGV*PSKAQQ
Trigger: TTGTTGGGCTTTGGAAGGTCACACACCACAGAGTAG...CAACCTCTCATTAATCACCTGTAGGAGAGGGTTCCTTTTACATGTCTTTATTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR TCA 90 bp CACATGAGTACTCTCAGAGGGTCTAGACATGGGGAAGAAGGGTTCAAAAGAAAGAATAAAGCCAGAAAATaGCAAGCTGTCTACCAGGTC +
Preference number: 4 (lower is better)
Translates to: HMSTLRGSRHGEEGFKRKNKARK*QAVYQV
Trigger: GACCTGGTAGACAGCTTGTCATTTTCTGGCTTTATT...CTTTCTTTTGAACCCTTCTTCCCCATGTCTAGACCCTCTGAGAGTACTCATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR GCA 90 bp GCACAAAATTACAGCATCCCAAACCCAGCGTGGGTCACAAGAAGAAACCTCGAACCAAAATTTGCTTCTTaGATGTCTGGCTCAAACATG +
Preference number: 4 (lower is better)
Translates to: AQNYSIPNPAWVTRRNLEPKFAS*MSGSNM
Trigger: CATGTTTGAGCCAGACATGCAAGAAGCAAATTTTGG...TTCGAGGTTTCTTCTTGTGACCCACGCTGGGTTTGGGATGCTGTAATTTTGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR GCA 90 bp CTATTGGGTAATAAGATGAAGGCAGCTACTTCCACTAAGTCCCATTTTCCCTTACAGAGCTGCAGGACATaGTGGAAAAGAGGTTCCCAT +
Preference number: 4 (lower is better)
Translates to: LLGNKMKAATSTKSHFPLQSCRT*WKRGSH
Trigger: ATGGGAACCTCTTTTCCAGCATGTCCTGCAGCTCTG...TAAGGGAAAATGGGACTTAGTGGAAGTAGCTGCCTTCATCTTATTACCCAATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp TGCATGCTATATATGTGTGTGCATGTGTGTTTGTGTGTGTGTGTGTATGTATGTCCACAGCTTTCTCTGTaGCTCCAGCCACAGATGTCT +
Preference number: 4 (lower is better)
Translates to: CMLYMCVHVCLCVCVYVCPQLSL*LQPQMS
Trigger: AGACATCTGTGGCTGGAGCCACAGAGAAAGCTGTGG...ACATACATACACACACACACACAAACACACATGCACACACATATATAGCATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp CCCTTTCTTGCTGGCTGTGATAAATGGACCCTCATTTTCTATCTTTCCCCTACATGGTGGAGAAGGTTCTaGTGTTGGAGAAACTTTTGG +
Preference number: 4 (lower is better)
Translates to: PFLAGCDKWTLIFYLSPTWWRRF*CWRNFW
Trigger: CCAAAAGTTTCTCCAACACCAGAACCTTCTCCACCA...TGTAGGGGAAAGATAGAAAATGAGGGTCCATTTATCACAGCCAGCAAGAAAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp CACATGAGTACTCTCAGAGGGTCTAGACATGGGGAAGAAGGGTTCAAAAGAAAGTACAACAACTGTTTCTaGATGGTCACTAGCCGTTCT +
Preference number: 4 (lower is better)
Translates to: HMSTLRGSRHGEEGFKRKYNNCF*MVTSRS
Trigger: AGAACGGCTAGTGACCATCCAGAAACAGTTGTTGTA...CTTTCTTTTGAACCCTTCTTCCCCATGTCTAGACCCTCTGAGAGTACTCATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp GGATGGGCAAGGCTTAAGGAACATTTTGTGTTGGGAGGCTTGAGAAGGGAGTTTGCTGGCTGTGATAAATaGACCCTCATTTTCTATCTT +
Preference number: 4 (lower is better)
Translates to: GWARLKEHFVLGGLRREFAGCDK*TLIFYL
Trigger: AAGATAGAAAATGAGGGTCCATTTATCACAGCCAGC...AAACTCCCTTCTCAAGCCTCCCAACACAAAATGTTCCTTAAGCCTTGCCCATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp TCCTCACCCTCTTTCATTCTCCAGCTCCACAACAGATACATTTCTTCACAATGTACAGTTTTAGTGGTCTaGGGTGTATTTGCTGCCACC +
Preference number: 4 (lower is better)
Translates to: SSPSFILQLHNRYISSQCTVLVV*GVFAAT
Trigger: GGTGGCAGCAAATACACCCCAGACCACTAAAACTGT...ACATTGTGAAGAAATGTATCTGTTGTGGAGCTGGAGAATGAAAGAGGGTGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp CAGGTGATTAATGAGAGGTTGAGCTTGGCAAGATTAGCCTGTTCCAATGTCTTCCTCCCCTTTCTGCACTaGGAGAGAAATAACTCTTAC +
Preference number: 4 (lower is better)
Translates to: QVINERLSLARLACSNVFLPFLH*ERNNSY
Trigger: GTAAGAGTTATTTCTCTCCCAGTGCAGAAAGGGGAG...GAAGACATTGGAACAGGCTAATCTTGCCAAGCTCAACCTCTCATTAATCACCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR CAA 72 bp AAAAGGAACCCTCTCCTACAGGTGATTAATGAGAGGTaGAGCTTGGCAAGATTAGCCTGTTCCAATGTCTTC +
Preference number: 4 (lower is better)
Translates to: KRNPLLQVINER*SLARLACSNVF
Trigger: GAAGACATTGGAACAGGCTAATCTTGCCAAGCTCAACCTCTCATTAATCACCTGTAGGAGAGGGTTCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
3UTR CAA 72 bp TCCCCATTGGGTGGAGAATGTTCCCAAAATGCTCCTTaGGAGAAACTCAACAAGACAAATAGCACAACATGG +
Preference number: 4 (lower is better)
Translates to: SPLGGECSQNAP*EKLNKTNSTTW
Trigger: CCATGTTGTGCTATTTGTCTTGTTGAGTTTCTCCAAAGGAGCATTTTGGGAACATTCTCCACCCAATGGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR TCA 90 bp CACATGAGTACTCTCAGAGGGTCTAGACATGGGGAAGAAGGGTTCAAAAGAAAGGACTATGGTAGTTGTTaGAGGCATGTTTGTGATAGT +
Preference number: 4 (lower is better)
Translates to: HMSTLRGSRHGEEGFKRKDYGSC*RHVCDS
Trigger: ACTATCACAAACATGCCTTCAACAACTACCATAGTC...CTTTCTTTTGAACCCTTCTTCCCCATGTCTAGACCCTCTGAGAGTACTCATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR TCA 90 bp GGATGGGCAAGGCTTAAGGAACATTTTGTGTTGGGAGGCTTGAGAAGGGAGTTTGCAATAATCATAATTTaGGTGAACACAGCCAAGCAA +
Preference number: 4 (lower is better)
Translates to: GWARLKEHFVLGGLRREFAIIII*VNTAKQ
Trigger: TTGCTTGGCTGTGTTCACTCAAATTATGATTATTGC...AAACTCCCTTCTCAAGCCTCCCAACACAAAATGTTCCTTAAGCCTTGCCCATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR GCA 90 bp TCCTCACCCTCTTTCATTCTCCAGCTCCACAACAGATACATTTCTTCACAATGTGTCCATGTCCTGTTCTaGTATTATGTCACCACAACC +
Preference number: 4 (lower is better)
Translates to: SSPSFILQLHNRYISSQCVHVLF*YYVTTT
Trigger: GGTTGTGGTGACATAATAGCAGAACAGGACATGGAC...ACATTGTGAAGAAATGTATCTGTTGTGGAGCTGGAGAATGAAAGAGGGTGAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR GCA 90 bp CTATTGGGTAATAAGATGAAGGCAGCTACTTCCACTAAGTCCCATTTTCCCTTAAGGTATGCAACAGGTTaGCTGCCTATATGGAGACTG +
Preference number: 4 (lower is better)
Translates to: LLGNKMKAATSTKSHFPLRYATG*LPIWRL
Trigger: CAGTCTCCATATAGGCAGGCAACCTGTTGCATACCT...TAAGGGAAAATGGGACTTAGTGGAAGTAGCTGCCTTCATCTTATTACCCAATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp TGCATGCTATATATGTGTGTGCATGTGTGTTTGTGTGTGTGTGTGTATGTATGTCAGATGTCTTACATCTaGAGCCTGTCTCCAAAGCCC +
Preference number: 4 (lower is better)
Translates to: CMLYMCVHVCLCVCVYVCQMSYI*SLSPKP
Trigger: GGGCTTTGGAGACAGGCTCCAGATGTAAGACATCTG...ACATACATACACACACACACACAAACACACATGCACACACATATATAGCATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp CCAATAAAGACATGTAAAAGGAACCCTCTCCTACAGGTGATTAATGAGAGGTTGTCCTTCCCCATTGGGTaGAGAATGTTCCCAAAATGC +
Preference number: 4 (lower is better)
Translates to: PIKTCKRNPLLQVINERLSFPIG*RMFPKC
Trigger: GCATTTTGGGAACATTCTCCACCCAATGGGGAAGGA...CAACCTCTCATTAATCACCTGTAGGAGAGGGTTCCTTTTACATGTCTTTATTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR GCA 90 bp TCCTCACCCTCTTTCATTCTCCAGCTCCACAACAGATACATTTCTTCACAATGTAGATCCTCCAAAATTTaGTTCTTGCATGTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: SSPSFILQLHNRYISSQCRSSKI*FLHVWL
Trigger: GAGCCAGACATGCAAGAAGCAAATTTTGGAGGATCT...ACATTGTGAAGAAATGTATCTGTTGTGGAGCTGGAGAATGAAAGAGGGTGAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR GCA 90 bp CCAATAAAGACATGTAAAAGGAACCCTCTCCTACAGGTGATTAATGAGAGGTTGGTGGTGTTAGTGCCATaGAAATTCATGTGGTGCTTC +
Preference number: 4 (lower is better)
Translates to: PIKTCKRNPLLQVINERLVVLVP*KFMWCF
Trigger: GAAGCACCACATGAATTTGCATGGCACTAACACCAC...CAACCTCTCATTAATCACCTGTAGGAGAGGGTTCCTTTTACATGTCTTTATTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR TCA 90 bp CCAATAAAGACATGTAAAAGGAACCCTCTCCTACAGGTGATTAATGAGAGGTTGAATGTCACAATCAACTaGGCTCCTAGGAAGTCCTAT +
Preference number: 4 (lower is better)
Translates to: PIKTCKRNPLLQVINERLNVTIN*APRKSY
Trigger: ATAGGACTTCCTAGGAGCTCAGTTGATTGTGACATT...CAACCTCTCATTAATCACCTGTAGGAGAGGGTTCCTTTTACATGTCTTTATTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp TGCATGCTATATATGTGTGTGCATGTGTGTTTGTGTGTGTGTGTGTATGTATGTCACCAAAGAGTTTCATaGCAGTTTTCTTCAGCCTAC +
Preference number: 4 (lower is better)
Translates to: CMLYMCVHVCLCVCVYVCHQRVS*QFSSAY
Trigger: GTAGGCTGAAGAAAACTGCCATGAAACTCTTTGGTG...ACATACATACACACACACACACAAACACACATGCACACACATATATAGCATGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp CCCTTATCTCAATTAAAAGACCGTGTTCCTTGTGATGAGATTATGAAAATTTCCAGGCACAGGCCTCCATaGGTTTTTCTGGATCTTTAC +
Preference number: 4 (lower is better)
Translates to: PLSQLKDRVPCDEIMKISRHRPP*VFLDLY
Trigger: GTAAAGATCCAGAAAAACCCATGGAGGCCTGTGCCT...GGAAATTTTCATAATCTCATCACAAGGAACACGGTCTTTTAATTGAGATAAGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR GCA 90 bp TGCATGCTATATATGTGTGTGCATGTGTGTTTGTGTGTGTGTGTGTATGTATGTATTATTCCAGGACCTTaGAATGGAGACATGTTGTTC +
Preference number: 4 (lower is better)
Translates to: CMLYMCVHVCLCVCVYVCIIPGP*NGDMLF
Trigger: GAACAACATGTCTCCATTGCAAGGTCCTGGAATAAT...ACATACATACACACACACACACAAACACACATGCACACACATATATAGCATGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp CCCTTATCTCAATTAAAAGACCGTGTTCCTTGTGATGAGATTATGAAAATTTCCTTGGCTGCTAATCAGTaGTTCATCATTCATTGGGGG +
Preference number: 4 (lower is better)
Translates to: PLSQLKDRVPCDEIMKISLAANQ*FIIHWG
Trigger: CCCCCAATGAATGATGAACCACTGATTAGCAGCCAA...GGAAATTTTCATAATCTCATCACAAGGAACACGGTCTTTTAATTGAGATAAGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CCA 90 bp CCCTTATCTCAATTAAAAGACCGTGTTCCTTGTGATGAGATTATGAAAATTTCCAATAACTCTTACACCTaGGGTGATGATGTACTGCAG +
Preference number: 4 (lower is better)
Translates to: PLSQLKDRVPCDEIMKISNNSYT*GDDVLQ
Trigger: CTGCAGTACATCATCACCCCAGGTGTAAGAGTTATT...GGAAATTTTCATAATCTCATCACAAGGAACACGGTCTTTTAATTGAGATAAGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS TCA 90 bp ACCCCTGCTGCCAGGCCCATCACTGATGGGCCTAAGGGCCTCATCTaGTACTCTAAGACGGGCTTCTCCTGCCGGGCCTGGGTCTCTCGG +
Preference number: 5 (lower is better)
Translates to: TPAARPITDGPKGLI*YSKTGFSCRAWVSR
Trigger: CCGAGAGACCCAGGCCCGGCAGGAGAAGCCCGTCTTAGAGTATCAGATGAGGCCCTTAGGCCCATCAGTGATGGGCCTGGCAGCAGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS GCA 90 bp TGGGCTCATCAACAGGCAGCAGCACATCTCGAGGCCTGGCCCTCATaGTCTGGGAGGCCTGTGGCTGGAGGTTATAGCAAGGGCCCATGG +
Preference number: 5 (lower is better)
Translates to: WAHQQAAAHLEAWPS*SGRPVAGGYSKGPW
Trigger: CCATGGGCCCTTGCTATAACCTCCAGCCACAGGCCTCCCAGAGCATGAGGGCCAGGCCTCGAGATGTGCTGCTGCCTGTTGATGAGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS CCA 90 bp GGGTTCTGGCCTCCCTGCCATGAGCTTCCCAAGTGTGGGCCTCCCTaGCATAGGCTTCCCTGCCATAAGCCTCTCGAGTATAGGCCTCCC +
Preference number: 5 (lower is better)
Translates to: GFWPPCHELPKCGPP*HRLPCHKPLEYRPP
Trigger: GGGAGGCCTATACTCGAGAGGCTTATGGCAGGGAAGCCTATGCCAGGGAGGCCCACACTTGGGAAGCTCATGGCAGGGAGGCCAGAACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS GCA 90 bp GAGGTCGAGGGTGCAGGCCAGGCAGTCCCAAGTATCGAGGGAGGCTaGTCACACCCCAGGGCAGGCCTTGGTAGAATCGACTATGGTAGT +
Preference number: 5 (lower is better)
Translates to: EVEGAGQAVPSIEGG*SHPRAGLGRIDYGS
Trigger: ACTACCATAGTCGATTCTACCAAGGCCTGCCCTGGGGTGTGAGCAGCCTCCCTCGATACTTGGGACTGCCTGGCCTGCACCCTCGACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS CCA 90 bp GCTGGAAGGCCTGTCCAACTGGTTGGGGCTTATCCAGGCAGGACCTaGCCCCACTGGAAGAGGACAGGGAGCCCAAGCAGGCCAATCATA +
Preference number: 5 (lower is better)
Translates to: AGRPVQLVGAYPGRT*PHWKRTGSPSRPII
Trigger: TATGATTGGCCTGCTTGGGCTCCCTGTCCTCTTCCAGTGGGGCCAGGTCCTGCCTGGATAAGCCCCAACCAGTTGGACAGGCCTTCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS TCA 90 bp TACTCTAAGACGGGCTTCTCCTGCCGGGCCTGGGTCTCTCGGACTTaGGTCTCTCTACAACGAACCTCTCGGGCCTGGGCTTCTCGGGTT +
Preference number: 5 (lower is better)
Translates to: YSKTGFSCRAWVSRT*VSLQRTSRAWASRV
Trigger: AACCCGAGAAGCCCAGGCCCGAGAGGTTCGTTGTAGAGAGACTCAAGTCCGAGAGACCCAGGCCCGGCAGGAGAAGCCCGTCTTAGAGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS CCA 90 bp TTGCCTGCCTATATGGAGACTGGCTGGAAGGCCTGTCCAACTGGTTaGGGCTTATCCAGGCAGGACCTGGCCCCACTGGAAGAGGACAGG +
Preference number: 5 (lower is better)
Translates to: LPAYMETGWKACPTG*GLSRQDLAPLEEDR
Trigger: CCTGTCCTCTTCCAGTGGGGCCAGGTCCTGCCTGGATAAGCCCCAACCAGTTGGACAGGCCTTCCAGCCAGTCTCCATATAGGCAGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS CCA 90 bp CAGGTTGCCTGCCTATATGGAGACTGGCTGGAAGGCCTGTCCAACTaGTTGGGGCTTATCCAGGCAGGACCTGGCCCCACTGGAAGAGGA +
Preference number: 5 (lower is better)
Translates to: QVACLYGDWLEGLSN*LGLIQAGPGPTGRG
Trigger: TCCTCTTCCAGTGGGGCCAGGTCCTGCCTGGATAAGCCCCAACCAGTTGGACAGGCCTTCCAGCCAGTCTCCATATAGGCAGGCAACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CAA 90 bp TGGGCACTTCTCTCTTGGAATGCTGTGCTTGGGGTAAGGAGGGCCTTCCTCACCTTCCTAGCCCGGTTATaGTCCGCTGAGCCGCCCTGG +
Preference number: 5 (lower is better)
Translates to: WALLSWNAVLGVRRAFLTFLARL*SAEPPW
Trigger: CCAGGGCGGCTCAGCGGACAATAACCGGGCTAGGAA...GGTGAGGAAGGCCCTCCTTACCCCAAGCACAGCATTCCAAGAGAGAAGTGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CAA 90 bp TGGGCACTTCTCTCTTGGAATGCTGTGCTTGGGGTAAGGAGGGCCTTCCTCACCGAGGGCCCTAGGCAGTaGAGATGCCAGCCCTCTGCA +
Preference number: 5 (lower is better)
Translates to: WALLSWNAVLGVRRAFLTEGPRQ*RCQPSA
Trigger: TGCAGAGGGCTGGCATCTCAACTGCCTAGGGCCCTC...GGTGAGGAAGGCCCTCCTTACCCCAAGCACAGCATTCCAAGAGAGAAGTGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS CCA 90 bp TCATGCTCTGGGAGGCCTGTGGCTGGAGGTTATAGCAAGGGCCCATaGGCAGGTGTAGGTGTGAGGGACGAGCTAGTTGAGGCCCAGATT +
Preference number: 5 (lower is better)
Translates to: SCSGRPVAGGYSKGP*AGVGVRDELVEAQI
Trigger: AATCTGGGCCTCAACTAGCTCGTCCCTCACACCTACACCTGCCCATGGGCCCTTGCTATAACCTCCAGCCACAGGCCTCCCAGAGCATGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CAA 90 bp CTGGTGTTTACTGAACCCATTATCCGGGCAGTCTTGTGGCCTGGTACCCAAGCTCTTCCTCTGTCTCCATaGCCCCAGGTGGCCGGGAGG +
Preference number: 5 (lower is better)
Translates to: LVFTEPIIRAVLWPGTQALPLSP*PQVAGR
Trigger: CCTCCCGGCCACCTGGGGCAATGGAGACAGAGGAAG...AGCTTGGGTACCAGGCCACAAGACTGCCCGGATAATGGGTTCAGTAAACACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CAA 90 bp GGAGAAGAGGAAGCTCAGGTACAGCCAGGGGCCACACTCCCCTTTCTGCACTGGGTCTCCCACAGCTTCTaGGGGAAAGGGGACATGGTT +
Preference number: 5 (lower is better)
Translates to: GEEEAQVQPGATLPFLHWVSHSF*GKGDMV
Trigger: AACCATGTCCCCTTTCCCCAAGAAGCTGTGGGAGAC...CCAGTGCAGAAAGGGGAGTGTGGCCCCTGGCTGTACCTGAGCTTCCTCTTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS TCA 90 bp GGCCATGGGCTGCTTCACTCAGGCCATCGTGGGTCTTGCTCTTGCTaGGACCTTTCTTGGAGCTGCCTTTCCCAGAACCTTTGCTCCGTC +
Preference number: 5 (lower is better)
Translates to: GHGLLHSGHRGSCSC*DLSWSCLSQNLCSV
Trigger: GACGGAGCAAAGGTTCTGGGAAAGGCAGCTCCAAGAAAGGTCTCAGCAAGAGCAAGACCCACGATGGCCTGAGTGAAGCAGCCCATGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS CCA 90 bp GTCACCAGGCAGGAACTTCGCTTGGTCCCATCTCGGTTTGCTCTCTaGCCCCCAGAGGCCATGCTGTCTGTCATACTGTCCATGTCCTGT +
Preference number: 5 (lower is better)
Translates to: VTRQELRLVPSRFAL*PPEAMLSVILSMSC
Trigger: ACAGGACATGGACAGTATGACAGACAGCATGGCCTCTGGGGGCCAGAGAGCAAACCGAGATGGGACCAAGCGAAGTTCCTGCCTGGTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS CCA 90 bp AGGATAAGACCTAACTGGGTCAAGGAGCATGTAGCCGTGGTGGCCTaGGGATGTGGTGGGATGGTAGCCCAGGTTCATATTGGGCCGTGG +
Preference number: 5 (lower is better)
Translates to: RIRPNWVKEHVAVVA*GCGGMVAQVHIGPW
Trigger: CCACGGCCCAATATGAACCTGGGCTACCATCCCACCACATCCCCAGGCCACCACGGCTACATGCTCCTTGACCCAGTTAGGTCTTATCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CAA 90 bp GGATGGAGAAGAGGAAGCTCAGGTACAGCCAGGGGCCACACTCCCCTTTCTGCAAGGCCATCGTGGGTCTaGCTCTTGCTGAGACCTTTC +
Preference number: 5 (lower is better)
Translates to: GWRRGSSGTARGHTPLSARPSWV*LLLRPF
Trigger: GAAAGGTCTCAGCAAGAGCAAGACCCACGATGGCCT...TGCAGAAAGGGGAGTGTGGCCCCTGGCTGTACCTGAGCTTCCTCTTCTCCATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CAA 90 bp GGATGGAGAAGAGGAAGCTCAGGTACAGCCAGGGGCCACACTCCCCTTTCTGCAACCCCAGGGCAGGCCTaGGTAGAATCGACTATGGTA +
Preference number: 5 (lower is better)
Translates to: GWRRGSSGTARGHTPLSATPGQA*VESTMV
Trigger: TACCATAGTCGATTCTACCAAGGCCTGCCCTGGGGT...TGCAGAAAGGGGAGTGTGGCCCCTGGCTGTACCTGAGCTTCCTCTTCTCCATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CAA 90 bp GGATGGAGAAGAGGAAGCTCAGGTACAGCCAGGGGCCACACTCCCCTTTCTGCACTTTGGTATCCTGTCTaGGGAGTGCAAACCTGGGGC +
Preference number: 5 (lower is better)
Translates to: GWRRGSSGTARGHTPLSALWYPV*GVQTWG
Trigger: GCCCCAGGTTTGCACTCCCAAGACAGGATACCAAAG...TGCAGAAAGGGGAGTGTGGCCCCTGGCTGTACCTGAGCTTCCTCTTCTCCATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS CCA 90 bp CAAGCTGCTCCCGCCGAAGCTCCCAATACAACAACTGTTTCTGGATaGTCACTAGCCGTTCTTCCTCTGTCTCCATTGCCCCAGGTGGCC +
Preference number: 5 (lower is better)
Translates to: QAAPAEAPNTTTVSG*SLAVLPLSPLPQVA
Trigger: GGCCACCTGGGGCAATGGAGACAGAGGAAGAACGGCTAGTGACCATCCAGAAACAGTTGTTGTATTGGGAGCTTCGGCGGGAGCAGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CAA 90 bp CTCAGCCCCAGGCCCTACTCTGTGGTGTGTGACCTTCCAAAGCCCAACAAAGTGGGATTCTCTTCACACTaGCCTTCCCCATCCCGTTCC +
Preference number: 5 (lower is better)
Translates to: LSPRPYSVVCDLPKPNKVGFSSH*PSPSRS
Trigger: GGAACGGGATGGGGAAGGCAAGTGTGAAGAGAATCC...CACTTTGTTGGGCTTTGGAAGGTCACACACCACAGAGTAGGGCCTGGGGCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CAA 90 bp TGGGCACTTCTCTCTTGGAATGCTGTGCTTGGGGTAAGGAGGGCCTTCCTCACCTGGACCAAGTGGGAATaGGAGAGCTCCATCTCCAGG +
Preference number: 5 (lower is better)
Translates to: WALLSWNAVLGVRRAFLTWTKWE*ESSISR
Trigger: CCTGGAGATGGAGCTCTCCAATTCCCACTTGGTCCA...GGTGAGGAAGGCCCTCCTTACCCCAAGCACAGCATTCCAAGAGAGAAGTGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CAA 90 bp TGGGCACTTCTCTCTTGGAATGCTGTGCTTGGGGTAAGGAGGGCCTTCCTCACCCCCCTTCCTTCCCCATaGGGTGGAGAATGTTCCCAA +
Preference number: 5 (lower is better)
Translates to: WALLSWNAVLGVRRAFLTPLPSP*GGECSQ
Trigger: TTGGGAACATTCTCCACCCAATGGGGAAGGAAGGGG...GGTGAGGAAGGCCCTCCTTACCCCAAGCACAGCATTCCAAGAGAGAAGTGCCCA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS GCA 90 bp CATATAGGGCATCTCCACTGTAGCTGTCTCGGGGTAGACAATCCCTaGGGACAAGCCCCAGGGCCTCACCTGAATCATCCTCAAATCCAG +
Preference number: 5 (lower is better)
Translates to: HIGHLHCSCLGVDNP*GQAPGPHLNHPQIQ
Trigger: CTGGATTTGAGGATGATTCAGGTGAGGCCCTGGGGCTTGTCCGCAGGGATTGTCTACCCCGAGACAGCTACAGTGGAGATGCCCTATATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS CCA 90 bp CTGACAACATCTTCAGGGCCATGGGCTGCTTCACTCAGGCCATCGTaGGTCTTGCTCTTGCTGAGACCTTTCTTGGAGCTGCCTTTCCCA +
Preference number: 5 (lower is better)
Translates to: LTTSSGPWAASLRPS*VLLLLRPFLELPFP
Trigger: TGGGAAAGGCAGCTCCAAGAAAGGTCTCAGCAAGAGCAAGACCCACGATGGCCTGAGTGAAGCAGCCCATGGCCCTGAAGATGTTGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CAA 90 bp GGATGGAGAAGAGGAAGCTCAGGTACAGCCAGGGGCCACACTCCCCTTTCTGCAAGCAGCTTCATCCTTTaGGGTCTCCATGATGATGGG +
Preference number: 5 (lower is better)
Translates to: GWRRGSSGTARGHTPLSASSFIL*GLHDDG
Trigger: CCCATCATCATGGAGACCCAAAAGGATGAAGCTGCT...TGCAGAAAGGGGAGTGTGGCCCCTGGCTGTACCTGAGCTTCCTCTTCTCCATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CAA 90 bp GGATGGAGAAGAGGAAGCTCAGGTACAGCCAGGGGCCACACTCCCCTTTCTGCAGAGGTATGCAACAGGTaGCCTGCCTATATGGAGACT +
Preference number: 5 (lower is better)
Translates to: GWRRGSSGTARGHTPLSAEVCNR*PAYMET
Trigger: AGTCTCCATATAGGCAGGCAACCTGTTGCATACCTC...TGCAGAAAGGGGAGTGTGGCCCCTGGCTGTACCTGAGCTTCCTCTTCTCCATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CAA 90 bp CTGGTGTTTACTGAACCCATTATCCGGGCAGTCTTGTGGCCTGGTACCCAAGCTGCTCAGCCCTCTCCTTaGACAGGTCAAGGCTGGAAG +
Preference number: 5 (lower is better)
Translates to: LVFTEPIIRAVLWPGTQAAQPSP*TGQGWK
Trigger: CTTCCAGCCTTGACCTGTCAAAGGAGAGGGCTGAGC...AGCTTGGGTACCAGGCCACAAGACTGCCCGGATAATGGGTTCAGTAAACACCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CAA 90 bp TGGGCACTTCTCTCTTGGAATGCTGTGCTTGGGGTAAGGAGGGCCTTCCTCACCTTGGGCACTTCTCTCTaGGAATGCTGTGCTTGGGGT +
Preference number: 5 (lower is better)
Translates to: WALLSWNAVLGVRRAFLTLGTSL*ECCAWG
Trigger: ACCCCAAGCACAGCATTCCAAGAGAGAAGTGCCCAA...GGTGAGGAAGGCCCTCCTTACCCCAAGCACAGCATTCCAAGAGAGAAGTGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS TCA 90 bp CTGAGCAGCTTCATCCTTTTGGGTCTCCATGATGATGGGGACAACTaGGGTACGTCCAGCTGGAAATGCAGCCTCAGGCTTCCAGGCACT +
Preference number: 5 (lower is better)
Translates to: LSSFILLGLHDDGDN*GTSSWKCSLRLPGT
Trigger: AGTGCCTGGAAGCCTGAGGCTGCATTTCCAGCTGGACGTACCTCAGTTGTCCCCATCATCATGGAGACCCAAAAGGATGAAGCTGCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS GCA 90 bp CTTGGCTCCTTTTTCTGCTGTTTGTTCACGGGTACTCCCAGAGGCTaGAGCTCCCTTGGCCTGAGCAGCTTCATCCTTTTGGGTCTCCAT +
Preference number: 5 (lower is better)
Translates to: LGSFFCCLFTGTPRG*SSLGLSSFILLGLH
Trigger: ATGGAGACCCAAAAGGATGAAGCTGCTCAGGCCAAGGGAGCTGCAGCCTCTGGGAGTACCCGTGAACAAACAGCAGAAAAAGGAGCCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CAA 90 bp CTCAGCCCCAGGCCCTACTCTGTGGTGTGTGACCTTCCAAAGCCCAACAAAGTGTTCCTTTCTAGGGGCTaGGAAGGTCTCCTCAAAGCA +
Preference number: 5 (lower is better)
Translates to: LSPRPYSVVCDLPKPNKVFLSRG*EGLLKA
Trigger: TGCTTTGAGGAGACCTTCCAAGCCCCTAGAAAGGAA...CACTTTGTTGGGCTTTGGAAGGTCACACACCACAGAGTAGGGCCTGGGGCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CAA 90 bp GCAGACTTGGCTGCTAATCAGTGGTTCATCATTCATTGGGGGAAAGGGGCAGGGAGGCAGGAACTTCGCTaGGTCCCATCTCGGTTTGCT +
Preference number: 5 (lower is better)
Translates to: ADLAANQWFIIHWGKGAGRQELR*VPSRFA
Trigger: AGCAAACCGAGATGGGACCAAGCGAAGTTCCTGCCT...CCCTGCCCCTTTCCCCCAATGAATGATGAACCACTGATTAGCAGCCAAGTCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CAA 90 bp GGACATGATATCAACAGTTTTAGTGGTCTGGGGTGTATTTGCTGCCACCCAAGCCTCCTCCCCACCTCCTaGGTAGGTCACCAGGCAGGA +
Preference number: 5 (lower is better)
Translates to: GHDINSFSGLGCICCHPSLLPTS*VGHQAG
Trigger: TCCTGCCTGGTGACCTACCAAGGAGGTGGGGAGGAG...GCTTGGGTGGCAGCAAATACACCCCAGACCACTAAAACTGTTGATATCATGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CAA 90 bp GGAGAAGAGGAAGCTCAGGTACAGCCAGGGGCCACACTCCCCTTTCTGCACTGGCCAGAAAGTTGGAATTaGGGCACTTCTCTCTTGGAA +
Preference number: 5 (lower is better)
Translates to: GEEEAQVQPGATLPFLHWPESWN*GTSLLE
Trigger: TTCCAAGAGAGAAGTGCCCAAATTCCAACTTTCTGG...CCAGTGCAGAAAGGGGAGTGTGGCCCCTGGCTGTACCTGAGCTTCCTCTTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS GCA 90 bp TTCGCTTGGTCCCATCTCGGTTTGCTCTCTGGCCCCCAGAGGCCATaGTGTCTGTCATACTGTCCATGTCCTGTTCTGCTATTATGTCAC +
Preference number: 5 (lower is better)
Translates to: FAWSHLGLLSGPQRP*CLSYCPCPVLLLCH
Trigger: GTGACATAATAGCAGAACAGGACATGGACAGTATGACAGACAGCATGGCCTCTGGGGGCCAGAGAGCAAACCGAGATGGGACCAAGCGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS CCA 90 bp CGTGGTGGCCTGGGGATGTGGTGGGATGGTAGCCCAGGTTCATATTaGGCCGTGGATACATTTGGGCAGTTTCCCACAGATATTCTAAGT +
Preference number: 5 (lower is better)
Translates to: RGGLGMWWDGSPGSY*AVDTFGQFPTDILS
Trigger: ACTTAGAATATCTGTGGGAAACTGCCCAAATGTATCCACGGCCCAATATGAACCTGGGCTACCATCCCACCACATCCCCAGGCCACCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CAA 90 bp GGACATGATATCAACAGTTTTAGTGGTCTGGGGTGTATTTGCTGCCACCCAAGCTCCCCCACAGGGCCATaGGGTGGGTTTACCTCTCCT +
Preference number: 5 (lower is better)
Translates to: GHDINSFSGLGCICCHPSSPTGP*GGFTSP
Trigger: AGGAGAGGTAAACCCACCCAATGGCCCTGTGGGGGA...GCTTGGGTGGCAGCAAATACACCCCAGACCACTAAAACTGTTGATATCATGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CAA 90 bp GGACATGATATCAACAGTTTTAGTGGTCTGGGGTGTATTTGCTGCCACCCAAGCGAGCGGCTTCTCCTGTaGAGGGCCATAGCAGCAGGT +
Preference number: 5 (lower is better)
Translates to: GHDINSFSGLGCICCHPSERLLL*RAIAAG
Trigger: ACCTGCTGCTATGGCCCTCAACAGGAGAAGCCGCTC...GCTTGGGTGGCAGCAAATACACCCCAGACCACTAAAACTGTTGATATCATGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CAA 90 bp CTGGTGTTTACTGAACCCATTATCCGGGCAGTCTTGTGGCCTGGTACCCAAGCTGGAGGCAATGCAGACTaGGCTGCTAATCAGTGGTTC +
Preference number: 5 (lower is better)
Translates to: LVFTEPIIRAVLWPGTQAGGNAD*AANQWF
Trigger: GAACCACTGATTAGCAGCCAAGTCTGCATTGCCTCC...AGCTTGGGTACCAGGCCACAAGACTGCCCGGATAATGGGTTCAGTAAACACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CAA 90 bp CTCAGCCCCAGGCCCTACTCTGTGGTGTGTGACCTTCCAAAGCCCAACAAAGTGTTTGTGTTGGGAGGCTaGAGAAGGGAGTTTTCCCTT +
Preference number: 5 (lower is better)
Translates to: LSPRPYSVVCDLPKPNKVFVLGG*RREFSL
Trigger: AAGGGAAAACTCCCTTCTCAAGCCTCCCAACACAAA...CACTTTGTTGGGCTTTGGAAGGTCACACACCACAGAGTAGGGCCTGGGGCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CAA 90 bp TGGGCACTTCTCTCTTGGAATGCTGTGCTTGGGGTAAGGAGGGCCTTCCTCACCAATGAGAGGTTGAGCTaGGCAAGATTAGCCTGTTCC +
Preference number: 5 (lower is better)
Translates to: WALLSWNAVLGVRRAFLTNERLS*ARLACS
Trigger: GGAACAGGCTAATCTTGCCAAGCTCAACCTCTCATT...GGTGAGGAAGGCCCTCCTTACCCCAAGCACAGCATTCCAAGAGAGAAGTGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CAA 90 bp CTCAGCCCCAGGCCCTACTCTGTGGTGTGTGACCTTCCAAAGCCCAACAAAGTGAGCACTAGTCTGTGTTaGGAAACAGGCCTGAAGCTT +
Preference number: 5 (lower is better)
Translates to: LSPRPYSVVCDLPKPNKVSTSLC*ETGLKL
Trigger: AAGCTTCAGGCCTGTTTCCAAACACAGACTAGTGCT...CACTTTGTTGGGCTTTGGAAGGTCACACACCACAGAGTAGGGCCTGGGGCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CAA 90 bp GAGGCCAGAAAGTTGGAATTTGGGCACTTCTCTCTTGGAATGCTGTGCTTGGGGATTATCCGGGCAGTCTaGTGGCCTGGTACCCAAGCT +
Preference number: 5 (lower is better)
Translates to: EARKLEFGHFSLGMLCLGIIRAV*WPGTQA
Trigger: AGCTTGGGTACCAGGCCACAAGACTGCCCGGATAAT...CCCCAAGCACAGCATTCCAAGAGAGAAGTGCCCAAATTCCAACTTTCTGGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS TCA 90 bp GCTGGAAAAGAGGTTCCCATTGCTGGTGAACTCTACCAGGGCCTGTaGGAAACTCACAGTGGCATTCCCTTCCTTCTCAACCTCCTCTTC +
Preference number: 5 (lower is better)
Translates to: AGKEVPIAGELYQGL*ETHSGIPFLLNLLF
Trigger: GAAGAGGAGGTTGAGAAGGAAGGGAATGCCACTGTGAGTTTCTCACAGGCCCTGGTAGAGTTCACCAGCAATGGGAACCTCTTTTCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS TCA 90 bp AGTCAGAGCTGCAGGACATGCTGGAAAAGAGGTTCCCATTGCTGGTaGACTCTACCAGGGCCTGTGAGAAACTCACAGTGGCATTCCCTT +
Preference number: 5 (lower is better)
Translates to: SQSCRTCWKRGSHCW*TLPGPVRNSQWHSL
Trigger: AAGGGAATGCCACTGTGAGTTTCTCACAGGCCCTGGTAGAGTTCACCAGCAATGGGAACCTCTTTTCCAGCATGTCCTGCAGCTCTGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS TCA 90 bp AAAGGTCACCATGGGAGGCAGCTCAGGGAGGTTTTGAGTGAAAGATaGGTCAGAGTCAGAGCTGCAGGACATGCTGGAAAAGAGGTTCCC +
Preference number: 5 (lower is better)
Translates to: KGHHGRQLREVLSER*VRVRAAGHAGKEVP
Trigger: GGGAACCTCTTTTCCAGCATGTCCTGCAGCTCTGACTCTGACTCATCTTTCACTCAAAACCTCCCTGAGCTGCCTCCCATGGTGACCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS TCA 90 bp TCAGCGATGTCAAAGGTCACCATGGGAGGCAGCTCAGGGAGGTTTTaGGTGAAAGATGAGTCAGAGTCAGAGCTGCAGGACATGCTGGAA +
Preference number: 5 (lower is better)
Translates to: SAMSKVTMGGSSGRF*VKDESESELQDMLE
Trigger: TTCCAGCATGTCCTGCAGCTCTGACTCTGACTCATCTTTCACTCAAAACCTCCCTGAGCTGCCTCCCATGGTGACCTTTGACATCGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS CCA 90 bp CCCAGCTCAAAGGCTTCCAAGGAGGCTGCAAGATCTTCATCATTGTaGAACTCAGGATTCTCTTCACACTTGCCTTCCCCATCCCGTTCC +
Preference number: 5 (lower is better)
Translates to: PSSKASKEAARSSSL*NSGFSSHLPSPSRS
Trigger: GGAACGGGATGGGGAAGGCAAGTGTGAAGAGAATCCTGAGTTCCACAATGATGAAGATCTTGCAGCCTCCTTGGAAGCCTTTGAGCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS CCA 90 bp ATAACTACTTGGCTAGGTTTCCATTCATGGCAGTGGAGGAGTAGCTaGTGGCAAGAGAGGCACCTTGCTCAGCCCTCTCCTTTGACAGGT +
Preference number: 5 (lower is better)
Translates to: ITTWLGFHSWQWRSS*WQERHLAQPSPLTG
Trigger: ACCTGTCAAAGGAGAGGGCTGAGCAAGGTGCCTCTCTTGCCACCAGCTACTCCTCCACTGCCATGAATGGAAACCTAGCCAAGTAGTTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CAA 90 bp TGGGCACTTCTCTCTTGGAATGCTGTGCTTGGGGTAAGGAGGGCCTTCCTCACCGTACAGATACCCTTCTaGCCACCAAAGAGTTTCATG +
Preference number: 5 (lower is better)
Translates to: WALLSWNAVLGVRRAFLTVQIPF*PPKSFM
Trigger: CATGAAACTCTTTGGTGGCAAGAAGGGTATCTGTAC...GGTGAGGAAGGCCCTCCTTACCCCAAGCACAGCATTCCAAGAGAGAAGTGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CAA 90 bp GGACATGATATCAACAGTTTTAGTGGTCTGGGGTGTATTTGCTGCCACCCAAGCCCTTTCCCAGAACCTTaGCTCCGTCCCCCTCCAAAG +
Preference number: 5 (lower is better)
Translates to: GHDINSFSGLGCICCHPSPFPEP*LRPPPK
Trigger: CTTTGGAGGGGGACGGAGCAAAGGTTCTGGGAAAGG...GCTTGGGTGGCAGCAAATACACCCCAGACCACTAAAACTGTTGATATCATGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CAA 90 bp CTTGCTGGCTGTGATAAATGGACCCTCATTTTCTATCTTTCCCCTACACTCCACGCTTCAGGGGCAGGCTaGGGTTGCACATGTGCTGAG +
Preference number: 5 (lower is better)
Translates to: LAGCDKWTLIFYLSPTLHASGAG*GCTCAE
Trigger: CTCAGCACATGTGCAACCCAAGCCTGCCCCTGAAGC...GTGGAGTGTAGGGGAAAGATAGAAAATGAGGGTCCATTTATCACAGCCAGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CAA 90 bp CAGGTGATTAATGAGAGGTTGAGCTTGGCAAGATTAGCCTGTTCCAATGTCTTCTGGTCCCATCTCGGTTaGCTCTCTGGCCCCCAGAGG +
Preference number: 5 (lower is better)
Translates to: QVINERLSLARLACSNVFWSHLG*LSGPQR
Trigger: CCTCTGGGGGCCAGAGAGCAAACCGAGATGGGACCA...GAAGACATTGGAACAGGCTAATCTTGCCAAGCTCAACCTCTCATTAATCACCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CAA 90 bp TCTGGGGTGTATTTGCTGCCACCCAAGCCAGCACTAGTCTGTGTTTGGAAACAGGCAGATGCACTTGAGTaGAACGTGGCCATAGATGGC +
Preference number: 5 (lower is better)
Translates to: SGVYLLPPKPALVCVWKQADALE*NVAIDG
Trigger: GCCATCTATGGCCACGTTCAACTCAAGTGCATCTGC...CTGTTTCCAAACACAGACTAGTGCTGGCTTGGGTGGCAGCAAATACACCCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CAA 90 bp TCTGGGGTGTATTTGCTGCCACCCAAGCCAGCACTAGTCTGTGTTTGGAAACAGACACGCCTGAGTCACTaGGCGTTTGTCTTCAGTACC +
Preference number: 5 (lower is better)
Translates to: SGVYLLPPKPALVCVWKQTRLSH*AFVFST
Trigger: GGTACTGAAGACAAACGCCAAGTGACTCAGGCGTGT...CTGTTTCCAAACACAGACTAGTGCTGGCTTGGGTGGCAGCAAATACACCCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS TCA 90 bp TCACACCCCAGGGCAGGCCTTGGTAGAATCGACTATGGTAGTTGTTaGAGGCATGTTTGTGATAGTAGCCCAGCTCAAAGGCTTCCAAGG +
Preference number: 5 (lower is better)
Translates to: SHPRAGLGRIDYGSC*RHVCDSSPAQRLPR
Trigger: CCTTGGAAGCCTTTGAGCTGGGCTACTATCACAAACATGCCTTCAACAACTACCATAGTCGATTCTACCAAGGCCTGCCCTGGGGTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS GCA 90 bp GATAGTGATATTGACATGGTCATAGGAGGTATGCAACAGGTTGCCTaGCTATATGGAGACTGGCTGGAAGGCCTGTCCAACTGGTTGGGG +
Preference number: 5 (lower is better)
Translates to: DSDIDMVIGGMQQVA*LYGDWLEGLSNWLG
Trigger: CCCCAACCAGTTGGACAGGCCTTCCAGCCAGTCTCCATATAGGCAGGCAACCTGTTGCATACCTCCTATGACCATGTCAATATCACTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS CCA 90 bp CAAGCCCCAGGGCCTCACCTGAATCATCCTCAAATCCAGGTGTGGTaGAGTCATAATAACCTTCATCACTATTGGGGGCGGATTCTTGCT +
Preference number: 5 (lower is better)
Translates to: QAPGPHLNHPQIQVW*SHNNLHHYWGRILA
Trigger: AGCAAGAATCCGCCCCCAATAGTGATGAAGGTTATTATGACTCCACCACACCTGGATTTGAGGATGATTCAGGTGAGGCCCTGGGGCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS CCA 90 bp GGACAAGCCCCAGGGCCTCACCTGAATCATCCTCAAATCCAGGTGTaGTGGAGTCATAATAACCTTCATCACTATTGGGGGCGGATTCTT +
Preference number: 5 (lower is better)
Translates to: GQAPGPHLNHPQIQV*WSHNNLHHYWGRIL
Trigger: AAGAATCCGCCCCCAATAGTGATGAAGGTTATTATGACTCCACCACACCTGGATTTGAGGATGATTCAGGTGAGGCCCTGGGGCTTGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CAA 90 bp CCCCAAGCGGGAGGCAATGCAGACTTGGCTGCTAATCAGTGGTTCATCATTCATAGGCCTTTCTTTGGCTaGGGCATAGAGGGAAACTTC +
Preference number: 5 (lower is better)
Translates to: PQAGGNADLAANQWFIIHRPFFG*GIEGNF
Trigger: GAAGTTTCCCTCTATGCCCAAGCCAAAGAAAGGCCT...ATGAATGATGAACCACTGATTAGCAGCCAAGTCTGCATTGCCTCCCGCTTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CAA 90 bp GGACATGATATCAACAGTTTTAGTGGTCTGGGGTGTATTTGCTGCCACCCAAGCATTGGGGGCGGATTCTaGCTGGTCACTCTGAGGAGT +
Preference number: 5 (lower is better)
Translates to: GHDINSFSGLGCICCHPSIGGGF*LVTLRS
Trigger: ACTCCTCAGAGTGACCAGCAAGAATCCGCCCCCAAT...GCTTGGGTGGCAGCAAATACACCCCAGACCACTAAAACTGTTGATATCATGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CAA 90 bp CAGGTGATTAATGAGAGGTTGAGCTTGGCAAGATTAGCCTGTTCCAATGTCTTCAGTCTGGCTCGCTGCTaGCAGTGGTGGGGAAAGCTG +
Preference number: 5 (lower is better)
Translates to: QVINERLSLARLACSNVFSLARC*QWWGKL
Trigger: CAGCTTTCCCCACCACTGCAAGCAGCGAGCCAGACT...GAAGACATTGGAACAGGCTAATCTTGCCAAGCTCAACCTCTCATTAATCACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CAA 90 bp CAGGTGATTAATGAGAGGTTGAGCTTGGCAAGATTAGCCTGTTCCAATGTCTTCGGCCTGTCCAACTGGTaGGGGCTTATCCAGGCAGGA +
Preference number: 5 (lower is better)
Translates to: QVINERLSLARLACSNVFGLSNW*GLIQAG
Trigger: TCCTGCCTGGATAAGCCCCAACCAGTTGGACAGGCC...GAAGACATTGGAACAGGCTAATCTTGCCAAGCTCAACCTCTCATTAATCACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CAA 90 bp GCACAAAATTACAGCATCCCAAACCCAGCGTGGGTCACAAGAAGAAACCTCGAAATTCCCCAGGTGCCCTaGACTCTGGCACTGATAGTG +
Preference number: 5 (lower is better)
Translates to: AQNYSIPNPAWVTRRNLEIPQVP*TLALIV
Trigger: CACTATCAGTGCCAGAGTCAAGGGCACCTGGGGAAT...TTCGAGGTTTCTTCTTGTGACCCACGCTGGGTTTGGGATGCTGTAATTTTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CAA 90 bp GGATGGAGAAGAGGAAGCTCAGGTACAGCCAGGGGCCACACTCCCCTTTCTGCACAACAGAACCTTGTTTaGTCTTCTGTTTGCAAATGG +
Preference number: 5 (lower is better)
Translates to: GWRRGSSGTARGHTPLSAQQNLV*SSVCKW
Trigger: CCATTTGCAAACAGAAGACAAAACAAGGTTCTGTTG...TGCAGAAAGGGGAGTGTGGCCCCTGGCTGTACCTGAGCTTCCTCTTCTCCATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CAA 90 bp CTGGTGTTTACTGAACCCATTATCCGGGCAGTCTTGTGGCCTGGTACCCAAGCTAAGGAACATTTTGTGTaGGGAGGCTTGAGAAGGGAG +
Preference number: 5 (lower is better)
Translates to: LVFTEPIIRAVLWPGTQAKEHFV*GGLRRE
Trigger: CTCCCTTCTCAAGCCTCCCAACACAAAATGTTCCTT...AGCTTGGGTACCAGGCCACAAGACTGCCCGGATAATGGGTTCAGTAAACACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CAA 90 bp GCAGACTTGGCTGCTAATCAGTGGTTCATCATTCATTGGGGGAAAGGGGCAGGGAAGAAGCCCTGTCATTaGATGATGCTAAGGACTCGG +
Preference number: 5 (lower is better)
Translates to: ADLAANQWFIIHWGKGAGKKPCH*MMLRTR
Trigger: CCGAGTCCTTAGCATCATCAAATGACAGGGCTTCTT...CCCTGCCCCTTTCCCCCAATGAATGATGAACCACTGATTAGCAGCCAAGTCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CAA 90 bp TCTGGGGTGTATTTGCTGCCACCCAAGCCAGCACTAGTCTGTGTTTGGAAACAGCATCCCAGAGCAGCTTaGGTAAGAGGCCAGAAAGTT +
Preference number: 5 (lower is better)
Translates to: SGVYLLPPKPALVCVWKQHPRAA*VRGQKV
Trigger: AACTTTCTGGCCTCTTACCAAAGCTGCTCTGGGATG...CTGTTTCCAAACACAGACTAGTGCTGGCTTGGGTGGCAGCAAATACACCCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CAA 90 bp TCTGGGGTGTATTTGCTGCCACCCAAGCCAGCACTAGTCTGTGTTTGGAAACAGCAAGGCAGTGCTTCCTaGGAGACTCTAAAGCACCAA +
Preference number: 5 (lower is better)
Translates to: SGVYLLPPKPALVCVWKQQGSAS*ETLKHQ
Trigger: TTGGTGCTTTAGAGTCTCCAAGGAAGCACTGCCTTG...CTGTTTCCAAACACAGACTAGTGCTGGCTTGGGTGGCAGCAAATACACCCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS CCA 90 bp ATGCTCAGGCCCCGTGTCCCTACTCCAGAATTGATAATAACTACTTaGCTAGGTTTCCATTCATGGCAGTGGAGGAGTAGCTGGTGGCAA +
Preference number: 5 (lower is better)
Translates to: MLRPRVPTPELIITT*LGFHSWQWRSSWWQ
Trigger: TTGCCACCAGCTACTCCTCCACTGCCATGAATGGAAACCTAGCCAAGTAGTTATTATCAATTCTGGAGTAGGGACACGGGGCCTGAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CAA 90 bp CTATTGGGTAATAAGATGAAGGCAGCTACTTCCACTAAGTCCCATTTTCCCTTAGGCCCCTGGCTCACTTaGCTCAGCCCCAGTGACCTT +
Preference number: 5 (lower is better)
Translates to: LLGNKMKAATSTKSHFPLGPWLT*LSPSDL
Trigger: AAGGTCACTGGGGCTGAGCAAAGTGAGCCAGGGGCC...TAAGGGAAAATGGGACTTAGTGGAAGTAGCTGCCTTCATCTTATTACCCAATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CAA 90 bp GGATGGGCAAGGCTTAAGGAACATTTTGTGTTGGGAGGCTTGAGAAGGGAGTTTGGGCCGTGGATACATTaGGGCAGTTTCCCACAGATA +
Preference number: 5 (lower is better)
Translates to: GWARLKEHFVLGGLRREFGPWIH*GSFPQI
Trigger: TATCTGTGGGAAACTGCCCAAATGTATCCACGGCCC...AAACTCCCTTCTCAAGCCTCCCAACACAAAATGTTCCTTAAGCCTTGCCCATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CAA 90 bp CCCTTTCTTGCTGGCTGTGATAAATGGACCCTCATTTTCTATCTTTCCCCTACATGGTCTGGGGTGTATTaGCTGCCACCCAAGCCAGCA +
Preference number: 5 (lower is better)
Translates to: PFLAGCDKWTLIFYLSPTWSGVY*LPPKPA
Trigger: TGCTGGCTTGGGTGGCAGCAAATACACCCCAGACCA...TGTAGGGGAAAGATAGAAAATGAGGGTCCATTTATCACAGCCAGCAAGAAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CAA 90 bp TCTGGGGTGTATTTGCTGCCACCCAAGCCAGCACTAGTCTGTGTTTGGAAACAGATAGTGCAAGCATCATaGTCATCTGTCTCCCACAGC +
Preference number: 5 (lower is better)
Translates to: SGVYLLPPKPALVCVWKQIVQAS*SSVSHS
Trigger: GCTGTGGGAGACAGATGACAATGATGCTTGCACTAT...CTGTTTCCAAACACAGACTAGTGCTGGCTTGGGTGGCAGCAAATACACCCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS GCA 90 bp CTGCAAGATCTTCATCATTGTGGAACTCAGGATTCTCTTCACACTTaGCTTCCCCATCCCGTTCCACATCAGCGATGTCAAAGGTCACCA +
Preference number: 5 (lower is better)
Translates to: LQDLHHCGTQDSLHT*LPHPVPHQRCQRSP
Trigger: TGGTGACCTTTGACATCGCTGATGTGGAACGGGATGGGGAAGGCAAGTGTGAAGAGAATCCTGAGTTCCACAATGATGAAGATCTTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS CCA 90 bp CCTCAAATCCAGGTGTGGTGGAGTCATAATAACCTTCATCACTATTaGGGGCGGATTCTTGCTGGTCACTCTGAGGAGTCAAAAGTTCCC +
Preference number: 5 (lower is better)
Translates to: PQIQVWWSHNNLHHY*GRILAGHSEESKVP
Trigger: GGGAACTTTTGACTCCTCAGAGTGACCAGCAAGAATCCGCCCCCAATAGTGATGAAGGTTATTATGACTCCACCACACCTGGATTTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CAA 90 bp TCCTCACCCTCTTTCATTCTCCAGCTCCACAACAGATACATTTCTTCACAATGTAGGATGGCTCTGAGGTaGGTCCTTCTGTCGCCTCAG +
Preference number: 5 (lower is better)
Translates to: SSPSFILQLHNRYISSQCRMALR*VLLSPQ
Trigger: CTGAGGCGACAGAAGGACCAACCTCAGAGCCATCCT...ACATTGTGAAGAAATGTATCTGTTGTGGAGCTGGAGAATGAAAGAGGGTGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CAA 90 bp TCCCCTTTCTGCACTGGGAGAGAAATAACTCTTACACCTGGGGTGATGATGTACGAAAAGAGGTTCCCATaGCTGGTGAACTCTACCAGG +
Preference number: 5 (lower is better)
Translates to: SPFCTGREITLTPGVMMYEKRFP*LVNSTR
Trigger: CCTGGTAGAGTTCACCAGCAATGGGAACCTCTTTTC...GTACATCATCACCCCAGGTGTAAGAGTTATTTCTCTCCCAGTGCAGAAAGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CAA 90 bp CCAATAAAGACATGTAAAAGGAACCCTCTCCTACAGGTGATTAATGAGAGGTTGATAGGTAGGGCTGGCTaGAACTGGGCCCCAAGGCAG +
Preference number: 5 (lower is better)
Translates to: PIKTCKRNPLLQVINERLIGRAG*NWAPRQ
Trigger: CTGCCTTGGGGCCCAGTTCAAGCCAGCCCTACCTAT...CAACCTCTCATTAATCACCTGTAGGAGAGGGTTCCTTTTACATGTCTTTATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CAA 90 bp TCCCCTTTCTGCACTGGGAGAGAAATAACTCTTACACCTGGGGTGATGATGTACTCCTTTTTCTGCTGTTaGTTCACGGGTACTCCCAGA +
Preference number: 5 (lower is better)
Translates to: SPFCTGREITLTPGVMMYSFFCC*FTGTPR
Trigger: TCTGGGAGTACCCGTGAACAAACAGCAGAAAAAGGA...GTACATCATCACCCCAGGTGTAAGAGTTATTTCTCTCCCAGTGCAGAAAGGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CAA 90 bp TCCCCTTTCTGCACTGGGAGAGAAATAACTCTTACACCTGGGGTGATGATGTACTCACAGGAGTTTTCCTaGGCCCAAAGGGTTTTCAAG +
Preference number: 5 (lower is better)
Translates to: SPFCTGREITLTPGVMMYSQEFS*AQRVFK
Trigger: CTTGAAAACCCTTTGGGCCAAGGAAAACTCCTGTGA...GTACATCATCACCCCAGGTGTAAGAGTTATTTCTCTCCCAGTGCAGAAAGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CAA 90 bp TCTGGGGTGTATTTGCTGCCACCCAAGCCAGCACTAGTCTGTGTTTGGAAACAGGTCCACAACAGAACCTaGTTTTGTCTTCTGTTTGCA +
Preference number: 5 (lower is better)
Translates to: SGVYLLPPKPALVCVWKQVHNRT*FCLLFA
Trigger: TGCAAACAGAAGACAAAACAAGGTTCTGTTGTGGAC...CTGTTTCCAAACACAGACTAGTGCTGGCTTGGGTGGCAGCAAATACACCCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CAA 90 bp CAGGTGATTAATGAGAGGTTGAGCTTGGCAAGATTAGCCTGTTCCAATGTCTTCGCCCTTAGCCAAAGGTaGGCCACCTCCTTTTTCTCT +
Preference number: 5 (lower is better)
Translates to: QVINERLSLARLACSNVFALSQR*ATSFFS
Trigger: AGAGAAAAAGGAGGTGGCCAACCTTTGGCTAAGGGC...GAAGACATTGGAACAGGCTAATCTTGCCAAGCTCAACCTCTCATTAATCACCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CAA 90 bp GGATGGGCAAGGCTTAAGGAACATTTTGTGTTGGGAGGCTTGAGAAGGGAGTTTCTGGCACTAGGCCTATaGGGTAATAAGATGAAGGCA +
Preference number: 5 (lower is better)
Translates to: GWARLKEHFVLGGLRREFLALGL*GNKMKA
Trigger: TGCCTTCATCTTATTACCCAATAGGCCTAGTGCCAG...AAACTCCCTTCTCAAGCCTCCCAACACAAAATGTTCCTTAAGCCTTGCCCATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CAA 90 bp CCCCAAGCGGGAGGCAATGCAGACTTGGCTGCTAATCAGTGGTTCATCATTCATTCCCAAAATGCTCCTTaGGAGAAACTCAACAAGACA +
Preference number: 5 (lower is better)
Translates to: PQAGGNADLAANQWFIIHSQNAP*EKLNKT
Trigger: TGTCTTGTTGAGTTTCTCCAAAGGAGCATTTTGGGA...ATGAATGATGAACCACTGATTAGCAGCCAAGTCTGCATTGCCTCCCGCTTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS GCA 90 bp GGCATGTTTGTGATAGTAGCCCAGCTCAAAGGCTTCCAAGGAGGCTaGAAGATCTTCATCATTGTGGAACTCAGGATTCTCTTCACACTT +
Preference number: 5 (lower is better)
Translates to: GMFVIVAQLKGFQGG*KIFIIVELRILFTL
Trigger: AAGTGTGAAGAGAATCCTGAGTTCCACAATGATGAAGATCTTGCAGCCTCCTTGGAAGCCTTTGAGCTGGGCTACTATCACAAACATGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS CCA 90 bp TGGGAGATCCTCCAAAATTTGCTTCTTGCATGTCTGGCTCAAACATaGCATCACTCTGGAAGAGCTGCATCAGGCAGGTACTTTGATCTT +
Preference number: 5 (lower is better)
Translates to: WEILQNLLLACLAQT*HHSGRAASGRYFDL
Trigger: AAGATCAAAGTACCTGCCTGATGCAGCTCTTCCAGAGTGATGCCATGTTTGAGCCAGACATGCAAGAAGCAAATTTTGGAGGATCTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CAA 90 bp CCCTTATCTCAATTAAAAGACCGTGTTCCTTGTGATGAGATTATGAAAATTTCCGTGATGCCCACAGGCTaGGCCTGTGGTAGAGGGCTG +
Preference number: 5 (lower is better)
Translates to: PLSQLKDRVPCDEIMKISVMPTG*ACGRGL
Trigger: CAGCCCTCTACCACAGGCCAAGCCTGTGGGCATCAC...GGAAATTTTCATAATCTCATCACAAGGAACACGGTCTTTTAATTGAGATAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CAA 90 bp CCCCAAGCGGGAGGCAATGCAGACTTGGCTGCTAATCAGTGGTTCATCATTCATGTCCCTACTCCAGAATaGATAATAACTACTTGGCTA +
Preference number: 5 (lower is better)
Translates to: PQAGGNADLAANQWFIIHVPTPE*IITTWL
Trigger: TAGCCAAGTAGTTATTATCAATTCTGGAGTAGGGAC...ATGAATGATGAACCACTGATTAGCAGCCAAGTCTGCATTGCCTCCCGCTTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CAA 90 bp AAGAAACCTCGAAAGCAAAAACTGGAGTGCAGTAGCAGCAGCAGCCTCCCTGGGTATATAATCACTAACTaGGCAACTGGAATAGGCACA +
Preference number: 5 (lower is better)
Translates to: KKPRKQKLECSSSSSLPGYIITN*ATGIGT
Trigger: TGTGCCTATTCCAGTTGCCAAGTTAGTGATTATATA...CCCAGGGAGGCTGCTGCTGCTACTGCACTCCAGTTTTTGCTTTCGAGGTTTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CAA 90 bp TCCCCTTTCTGCACTGGGAGAGAAATAACTCTTACACCTGGGGTGATGATGTACGTGATTAATGAGAGGTaGAGCTTGGCAAGATTAGCC +
Preference number: 5 (lower is better)
Translates to: SPFCTGREITLTPGVMMYVINER*SLARLA
Trigger: GGCTAATCTTGCCAAGCTCAACCTCTCATTAATCAC...GTACATCATCACCCCAGGTGTAAGAGTTATTTCTCTCCCAGTGCAGAAAGGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CAA 90 bp CTATTGGGTAATAAGATGAAGGCAGCTACTTCCACTAAGTCCCATTTTCCCTTATCCCCTAGGCTGCCATaGGGTTTCAGCCACAAACTG +
Preference number: 5 (lower is better)
Translates to: LLGNKMKAATSTKSHFPLSPRLP*GFSHKL
Trigger: CAGTTTGTGGCTGAAACCCAATGGCAGCCTAGGGGA...TAAGGGAAAATGGGACTTAGTGGAAGTAGCTGCCTTCATCTTATTACCCAATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CAA 90 bp CCCCAAGCGGGAGGCAATGCAGACTTGGCTGCTAATCAGTGGTTCATCATTCATGCAAAGAAGTATATGTaGTTACAAACAGGCAGTGCA +
Preference number: 5 (lower is better)
Translates to: PQAGGNADLAANQWFIIHAKKYM*LQTGSA
Trigger: TGCACTGCCTGTTTGTAACAACATATACTTCTTTGC...ATGAATGATGAACCACTGATTAGCAGCCAAGTCTGCATTGCCTCCCGCTTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CAA 90 bp CCCTTATCTCAATTAAAAGACCGTGTTCCTTGTGATGAGATTATGAAAATTTCCGCTGGTCTGGGTCCCTaGAGTGGTGGTGTTAGTGCC +
Preference number: 5 (lower is better)
Translates to: PLSQLKDRVPCDEIMKISAGLGP*SGGVSA
Trigger: GGCACTAACACCACCACTCAAGGGACCCAGACCAGC...GGAAATTTTCATAATCTCATCACAAGGAACACGGTCTTTTAATTGAGATAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CAA 90 bp TCCTCACCCTCTTTCATTCTCCAGCTCCACAACAGATACATTTCTTCACAATGTCATCAGGCAGGTACTTaGATCTTTCTTGGAGCAGGT +
Preference number: 5 (lower is better)
Translates to: SSPSFILQLHNRYISSQCHQAGT*IFLGAG
Trigger: ACCTGCTCCAAGAAAGATCAAAGTACCTGCCTGATG...ACATTGTGAAGAAATGTATCTGTTGTGGAGCTGGAGAATGAAAGAGGGTGAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CAA 90 bp CAGGTGATTAATGAGAGGTTGAGCTTGGCAAGATTAGCCTGTTCCAATGTCTTCGAGATCCTCCAAAATTaGCTTCTTGCATGTCTGGCT +
Preference number: 5 (lower is better)
Translates to: QVINERLSLARLACSNVFEILQN*LLACLA
Trigger: AGCCAGACATGCAAGAAGCAAATTTTGGAGGATCTC...GAAGACATTGGAACAGGCTAATCTTGCCAAGCTCAACCTCTCATTAATCACCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CAA 90 bp CAGGTGATTAATGAGAGGTTGAGCTTGGCAAGATTAGCCTGTTCCAATGTCTTCTGTTCCCAAGCTAAATaGCCATATCTCAGGAATGGC +
Preference number: 5 (lower is better)
Translates to: QVINERLSLARLACSNVFCSQAK*PYLRNG
Trigger: GCCATTCCTGAGATATGGCAATTTAGCTTGGGAACA...GAAGACATTGGAACAGGCTAATCTTGCCAAGCTCAACCTCTCATTAATCACCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CAA 90 bp CCAATAAAGACATGTAAAAGGAACCCTCTCCTACAGGTGATTAATGAGAGGTTGGGAGTGACTATAGGATaGGAAAGTCAGGGATCAGGC +
Preference number: 5 (lower is better)
Translates to: PIKTCKRNPLLQVINERLGVTIG*ESQGSG
Trigger: GCCTGATCCCTGACTTTCCAATCCTATAGTCACTCC...CAACCTCTCATTAATCACCTGTAGGAGAGGGTTCCTTTTACATGTCTTTATTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CAA 90 bp CACATGAGTACTCTCAGAGGGTCTAGACATGGGGAAGAAGGGTTCAAAAGAAAGAGGGGATTAGCATTTTaGTCTTTAACCCAAGCTATG +
Preference number: 5 (lower is better)
Translates to: HMSTLRGSRHGEEGFKRKRGLAF*SLTQAM
Trigger: CATAGCTTGGGTTAAAGACAAAAATGCTAATCCCCT...CTTTCTTTTGAACCCTTCTTCCCCATGTCTAGACCCTCTGAGAGTACTCATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CAA 90 bp CCCTTATCTCAATTAAAAGACCGTGTTCCTTGTGATGAGATTATGAAAATTTCCCTGGGTCTCTCGGACTaGAGTCTCTCTACAACGAAC +
Preference number: 5 (lower is better)
Translates to: PLSQLKDRVPCDEIMKISLGLSD*SLSTTN
Trigger: GTTCGTTGTAGAGAGACTCAAGTCCGAGAGACCCAG...GGAAATTTTCATAATCTCATCACAAGGAACACGGTCTTTTAATTGAGATAAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CAA 90 bp CCCTTTCTTGCTGGCTGTGATAAATGGACCCTCATTTTCTATCTTTCCCCTACATCCAAAATTTGCTTCTaGCATGTCTGGCTCAAACAT +
Preference number: 5 (lower is better)
Translates to: PFLAGCDKWTLIFYLSPTSKICF*HVWLKH
Trigger: ATGTTTGAGCCAGACATGCAAGAAGCAAATTTTGGA...TGTAGGGGAAAGATAGAAAATGAGGGTCCATTTATCACAGCCAGCAAGAAAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CAA 90 bp TCCTCACCCTCTTTCATTCTCCAGCTCCACAACAGATACATTTCTTCACAATGTCATTATTCCAGGACCTaGCAATGGAGACATGTTGTT +
Preference number: 5 (lower is better)
Translates to: SSPSFILQLHNRYISSQCHYSRT*QWRHVV
Trigger: AACAACATGTCTCCATTGCAAGGTCCTGGAATAATG...ACATTGTGAAGAAATGTATCTGTTGTGGAGCTGGAGAATGAAAGAGGGTGAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS-3UTR CAA 90 bp CCCTTTCTTGCTGGCTGTGATAAATGGACCCTCATTTTCTATCTTTCCCCTACATGCAATAATCATAATTaGAGTGAACACAGCCAAGCA +
Preference number: 5 (lower is better)
Translates to: PFLAGCDKWTLIFYLSPTCNNHN*SEHSQA
Trigger: TGCTTGGCTGTGTTCACTCAAATTATGATTATTGCA...TGTAGGGGAAAGATAGAAAATGAGGGTCCATTTATCACAGCCAGCAAGAAAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS CAA 72 bp GTGGGGTCCAGCCCGGTCAGGTTCCTAGCCCGGTTATaGTCCGCTGAGCCGCCCTGGGCCGGGCTGCAGCCT +
Preference number: 6 (lower is better)
Translates to: VGSSPVRFLARL*SAEPPWAGLQP
Trigger: AGGCTGCAGCCCGGCCCAGGGCGGCTCAGCGGACAATAACCGGGCTAGGAACCTGACCGGGCTGGACCCCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS TCA 72 bp CAGGCCGGACCCTGGGCAGCTGAGGAATGCCATGGGTaGTGCCCACAGGCTTGGCCTGTGGTAGAGGGCTGG +
Preference number: 6 (lower is better)
Translates to: QAGPWAAEECHG*CPQAWPVVEGW
Trigger: CCAGCCCTCTACCACAGGCCAAGCCTGTGGGCATCACCCATGGCATTCCTCAGCTGCCCAGGGTCCGGCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS GCA 72 bp GGTGCAGGCCAGGCAGTCCCAAGTATCGAGGGAGGCTaGTCACACCCCAGGGCAGGCCTTGGTAGAATCGAC +
Preference number: 6 (lower is better)
Translates to: GAGQAVPSIEGG*SHPRAGLGRID
Trigger: GTCGATTCTACCAAGGCCTGCCCTGGGGTGTGAGCAGCCTCCCTCGATACTTGGGACTGCCTGGCCTGCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS CAA 90 bp TCCATCTCCAGGGTCTCTGCAGTGTCGAGAGAGCGGCTTCTCCTGTaGAGGGCCATAGCAGCAGGTGGAGGTCGAGGGTGCAGGCCAGGC +
Preference number: 6 (lower is better)
Translates to: SISRVSAVSRERLLL*RAIAAGGGRGCRPG
Trigger: GCCTGGCCTGCACCCTCGACCTCCACCTGCTGCTATGGCCCTCAACAGGAGAAGCCGCTCTCTCGACACTGCAGAGACCCTGGAGATGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS TCA 72 bp GCCAGGCCCATCACTGATGGGCCTAAGGGCCTCATCTaGTACTCTAAGACGGGCTTCTCCTGCCGGGCCTGG +
Preference number: 6 (lower is better)
Translates to: ARPITDGPKGLI*YSKTGFSCRAW
Trigger: CCAGGCCCGGCAGGAGAAGCCCGTCTTAGAGTATCAGATGAGGCCCTTAGGCCCATCAGTGATGGGCCTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS TCA 72 bp CCCATGGGCAGGTGTAGGTGTGAGGGACGAGCTAGTTaGGGCCCAGATTCCCCAGGTGCCCTTGACTCTGGC +
Preference number: 6 (lower is better)
Translates to: PMGRCRCEGRAS*GPDSPGALDSG
Trigger: GCCAGAGTCAAGGGCACCTGGGGAATCTGGGCCTCAACTAGCTCGTCCCTCACACCTACACCTGCCCATGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS CAA 72 bp AGGGTCTCTGCAGTGTCGAGAGAGCGGCTTCTCCTGTaGAGGGCCATAGCAGCAGGTGGAGGTCGAGGGTGC +
Preference number: 6 (lower is better)
Translates to: RVSAVSRERLLL*RAIAAGGGRGC
Trigger: GCACCCTCGACCTCCACCTGCTGCTATGGCCCTCAACAGGAGAAGCCGCTCTCTCGACACTGCAGAGACCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS GCA 72 bp CAACAGGCAGCAGCACATCTCGAGGCCTGGCCCTCATaGTCTGGGAGGCCTGTGGCTGGAGGTTATAGCAAG +
Preference number: 6 (lower is better)
Translates to: QQAAAHLEAWPS*SGRPVAGGYSK
Trigger: CTTGCTATAACCTCCAGCCACAGGCCTCCCAGAGCATGAGGGCCAGGCCTCGAGATGTGCTGCTGCCTGTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS CCA 72 bp CACCTCCTTGGTAGGTCACCAGGCAGGAACTTCGCTTaGTCCCATCTCGGTTTGCTCTCTGGCCCCCAGAGG +
Preference number: 6 (lower is better)
Translates to: HLLGRSPGRNFA*SHLGLLSGPQR
Trigger: CCTCTGGGGGCCAGAGAGCAAACCGAGATGGGACCAAGCGAAGTTCCTGCCTGGTGACCTACCAAGGAGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS CAA 90 bp GTTGCCTGCCTATATGGAGACTGGCTGGAAGGCCTGTCCAACTGGTaGGGGCTTATCCAGGCAGGACCTGGCCCCACTGGAAGAGGACAG +
Preference number: 6 (lower is better)
Translates to: VACLYGDWLEGLSNW*GLIQAGPGPTGRGQ
Trigger: CTGTCCTCTTCCAGTGGGGCCAGGTCCTGCCTGGATAAGCCCCAACCAGTTGGACAGGCCTTCCAGCCAGTCTCCATATAGGCAGGCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS GCA 72 bp GTCCCCCACAGGGCCATTGGGTGGGTTTACCTCTCCTaGTACTACCTTCTCCCCTGTTTCTGGGCTATGGGG +
Preference number: 6 (lower is better)
Translates to: VPHRAIGWVYLS*YYLLPCFWAMG
Trigger: CCCCATAGCCCAGAAACAGGGGAGAAGGTAGTAGCAGGAGAGGTAAACCCACCCAATGGCCCTGTGGGGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS CCA 72 bp CCTCCCTGCCATGAGCTTCCCAAGTGTGGGCCTCCCTaGCATAGGCTTCCCTGCCATAAGCCTCTCGAGTAT +
Preference number: 6 (lower is better)
Translates to: PPCHELPKCGPP*HRLPCHKPLEY
Trigger: ATACTCGAGAGGCTTATGGCAGGGAAGCCTATGCCAGGGAGGCCCACACTTGGGAAGCTCATGGCAGGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS CCA 72 bp TGCCTATATGGAGACTGGCTGGAAGGCCTGTCCAACTaGTTGGGGCTTATCCAGGCAGGACCTGGCCCCACT +
Preference number: 6 (lower is better)
Translates to: CLYGDWLEGLSN*LGLIQAGPGPT
Trigger: AGTGGGGCCAGGTCCTGCCTGGATAAGCCCCAACCAGTTGGACAGGCCTTCCAGCCAGTCTCCATATAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS CAA 72 bp TCAGCCTACCTGGGCCGGATGAGGATGGCTCTGAGGTaGGTCCTTCTGTCGCCTCAGCTGCCTTGTTCTTGG +
Preference number: 6 (lower is better)
Translates to: SAYLGRMRMALR*VLLSPQLPCSW
Trigger: CCAAGAACAAGGCAGCTGAGGCGACAGAAGGACCAACCTCAGAGCCATCCTCATCCGGCCCAGGTAGGCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS CAA 90 bp CTCCTCGTCATCATCATCTGGCAAGGCCATCTCCTCCCCACCTCCTaGGTAGGTCACCAGGCAGGAACTTCGCTTGGTCCCATCTCGGTT +
Preference number: 6 (lower is better)
Translates to: LLVIIIWQGHLLPTS*VGHQAGTSLGPISV
Trigger: AACCGAGATGGGACCAAGCGAAGTTCCTGCCTGGTGACCTACCAAGGAGGTGGGGAGGAGATGGCCTTGCCAGATGATGATGACGAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS GCA 72 bp CATCTCCACTGTAGCTGTCTCGGGGTAGACAATCCCTaGGGACAAGCCCCAGGGCCTCACCTGAATCATCCT +
Preference number: 6 (lower is better)
Translates to: HLHCSCLGVDNP*GQAPGPHLNHP
Trigger: AGGATGATTCAGGTGAGGCCCTGGGGCTTGTCCGCAGGGATTGTCTACCCCGAGACAGCTACAGTGGAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS CCA 72 bp CAGGAACTTCGCTTGGTCCCATCTCGGTTTGCTCTCTaGCCCCCAGAGGCCATGCTGTCTGTCATACTGTCC +
Preference number: 6 (lower is better)
Translates to: QELRLVPSRFAL*PPEAMLSVILS
Trigger: GGACAGTATGACAGACAGCATGGCCTCTGGGGGCCAGAGAGCAAACCGAGATGGGACCAAGCGAAGTTCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS CCA 72 bp TATATGGAGACTGGCTGGAAGGCCTGTCCAACTGGTTaGGGCTTATCCAGGCAGGACCTGGCCCCACTGGAA +
Preference number: 6 (lower is better)
Translates to: YMETGWKACPTG*GLSRQDLAPLE
Trigger: TTCCAGTGGGGCCAGGTCCTGCCTGGATAAGCCCCAACCAGTTGGACAGGCCTTCCAGCCAGTCTCCATATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS CAA 72 bp GGGCCATGGGCTGCTTCACTCAGGCCATCGTGGGTCTaGCTCTTGCTGAGACCTTTCTTGGAGCTGCCTTTC +
Preference number: 6 (lower is better)
Translates to: GPWAASLRPSWV*LLLRPFLELPF
Trigger: GAAAGGCAGCTCCAAGAAAGGTCTCAGCAAGAGCAAGACCCACGATGGCCTGAGTGAAGCAGCCCATGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS CAA 72 bp TGGTGGCAAGAGAGGCACCTTGCTCAGCCCTCTCCTTaGACAGGTCAAGGCTGGAAGGCCCATAGTGAGTGG +
Preference number: 6 (lower is better)
Translates to: WWQERHLAQPSP*TGQGWKAHSEW
Trigger: CCACTCACTATGGGCCTTCCAGCCTTGACCTGTCAAAGGAGAGGGCTGAGCAAGGTGCCTCTCTTGCCACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS CAA 90 bp GCTTCACTCAGGCCATCGTGGGTCTTGCTCTTGCTGAGACCTTTCTaGGAGCTGCCTTTCCCAGAACCTTTGCTCCGTCCCCCTCCAAAG +
Preference number: 6 (lower is better)
Translates to: ASLRPSWVLLLLRPF*ELPFPEPLLRPPPK
Trigger: CTTTGGAGGGGGACGGAGCAAAGGTTCTGGGAAAGGCAGCTCCAAGAAAGGTCTCAGCAAGAGCAAGACCCACGATGGCCTGAGTGAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS CCA 72 bp TCTTCAGGGCCATGGGCTGCTTCACTCAGGCCATCGTaGGTCTTGCTCTTGCTGAGACCTTTCTTGGAGCTG +
Preference number: 6 (lower is better)
Translates to: SSGPWAASLRPS*VLLLLRPFLEL
Trigger: CAGCTCCAAGAAAGGTCTCAGCAAGAGCAAGACCCACGATGGCCTGAGTGAAGCAGCCCATGGCCCTGAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS CCA 72 bp TTTCAGGGATGTCACATCCCCAAACAAGAGGCTCAGTaGGTCCCCCACAGGGCCATTGGGTGGGTTTACCTC +
Preference number: 6 (lower is better)
Translates to: FQGCHIPKQEAQ*VPHRAIGWVYL
Trigger: GAGGTAAACCCACCCAATGGCCCTGTGGGGGACCCACTGAGCCTCTTGTTTGGGGATGTGACATCCCTGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS CCA 72 bp CCTAACTGGGTCAAGGAGCATGTAGCCGTGGTGGCCTaGGGATGTGGTGGGATGGTAGCCCAGGTTCATATT +
Preference number: 6 (lower is better)
Translates to: PNWVKEHVAVVA*GCGGMVAQVHI
Trigger: AATATGAACCTGGGCTACCATCCCACCACATCCCCAGGCCACCACGGCTACATGCTCCTTGACCCAGTTAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS CCA 72 bp TGGCTAGGTTTCCATTCATGGCAGTGGAGGAGTAGCTaGTGGCAAGAGAGGCACCTTGCTCAGCCCTCTCCT +
Preference number: 6 (lower is better)
Translates to: WLGFHSWQWRSS*WQERHLAQPSP
Trigger: AGGAGAGGGCTGAGCAAGGTGCCTCTCTTGCCACCAGCTACTCCTCCACTGCCATGAATGGAAACCTAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS CAA 72 bp AGGCCATCGTGGGTCTTGCTCTTGCTGAGACCTTTCTaGGAGCTGCCTTTCCCAGAACCTTTGCTCCGTCCC +
Preference number: 6 (lower is better)
Translates to: RPSWVLLLLRPF*ELPFPEPLLRP
Trigger: GGGACGGAGCAAAGGTTCTGGGAAAGGCAGCTCCAAGAAAGGTCTCAGCAAGAGCAAGACCCACGATGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS CAA 72 bp TCTGGATGGTCACTAGCCGTTCTTCCTCTGTCTCCATaGCCCCAGGTGGCCGGGAGGACAAAAAGGGCTCAA +
Preference number: 6 (lower is better)
Translates to: SGWSLAVLPLSP*PQVAGRTKRAQ
Trigger: TTGAGCCCTTTTTGTCCTCCCGGCCACCTGGGGCAATGGAGACAGAGGAAGAACGGCTAGTGACCATCCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS CAA 90 bp ACATCTTCAGGGCCATGGGCTGCTTCACTCAGGCCATCGTGGGTCTaGCTCTTGCTGAGACCTTTCTTGGAGCTGCCTTTCCCAGAACCT +
Preference number: 6 (lower is better)
Translates to: TSSGPWAASLRPSWV*LLLRPFLELPFPEP
Trigger: AGGTTCTGGGAAAGGCAGCTCCAAGAAAGGTCTCAGCAAGAGCAAGACCCACGATGGCCTGAGTGAAGCAGCCCATGGCCCTGAAGATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS TCA 72 bp ACTGGCTTCAGGGGCAGGCTTGGGTTGCACATGTGCTaGGGCACAGGCCTCCATGGGTTTTTCTGGATCTTT +
Preference number: 6 (lower is better)
Translates to: TGFRGRLGLHMC*GTGLHGFFWIF
Trigger: AAAGATCCAGAAAAACCCATGGAGGCCTGTGCCTCAGCACATGTGCAACCCAAGCCTGCCCCTGAAGCCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS CCA 72 bp CTTTCTCTGTGGCTCCAGCCACAGATGTCTTACATCTaGAGCCTGTCTCCAAAGCCCCATGGGCACTCTGAG +
Preference number: 6 (lower is better)
Translates to: LSLWLQPQMSYI*SLSPKPHGHSE
Trigger: CTCAGAGTGCCCATGGGGCTTTGGAGACAGGCTCCAGATGTAAGACATCTGTGGCTGGAGCCACAGAGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS CCA 72 bp GGAGGTATGCAACAGGTTGCCTGCCTATATGGAGACTaGCTGGAAGGCCTGTCCAACTGGTTGGGGCTTATC +
Preference number: 6 (lower is better)
Translates to: GGMQQVACLYGD*LEGLSNWLGLI
Trigger: GATAAGCCCCAACCAGTTGGACAGGCCTTCCAGCCAGTCTCCATATAGGCAGGCAACCTGTTGCATACCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS CAA 72 bp GTATCGAGGGAGGCTGCTCACACCCCAGGGCAGGCCTaGGTAGAATCGACTATGGTAGTTGTTGAAGGCATG +
Preference number: 6 (lower is better)
Translates to: VSREAAHTPGQA*VESTMVVVEGM
Trigger: CATGCCTTCAACAACTACCATAGTCGATTCTACCAAGGCCTGCCCTGGGGTGTGAGCAGCCTCCCTCGATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS CAA 90 bp GATGGCTCTGAGGTTGGTCCTTCTGTCGCCTCAGCTGCCTTGTTCTaGGCTCCTTTTTCTGCTGTTTGTTCACGGGTACTCCCAGAGGCT +
Preference number: 6 (lower is better)
Translates to: DGSEVGPSVASAALF*APFSAVCSRVLPEA
Trigger: AGCCTCTGGGAGTACCCGTGAACAAACAGCAGAAAAAGGAGCCAAGAACAAGGCAGCTGAGGCGACAGAAGGACCAACCTCAGAGCCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS TCA 72 bp AGGTCACCATGGGAGGCAGCTCAGGGAGGTTTTGAGTaGAAGATGAGTCAGAGTCAGAGCTGCAGGACATGC +
Preference number: 6 (lower is better)
Translates to: RSPWEAAQGGFE*KMSQSQSCRTC
Trigger: GCATGTCCTGCAGCTCTGACTCTGACTCATCTTTCACTCAAAACCTCCCTGAGCTGCCTCCCATGGTGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS CCA 72 bp CTGGGGATGTGGTGGGATGGTAGCCCAGGTTCATATTaGGCCGTGGATACATTTGGGCAGTTTCCCACAGAT +
Preference number: 6 (lower is better)
Translates to: LGMWWDGSPGSY*AVDTFGQFPTD
Trigger: ATCTGTGGGAAACTGCCCAAATGTATCCACGGCCCAATATGAACCTGGGCTACCATCCCACCACATCCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS CCA 72 bp CCCGCCGAAGCTCCCAATACAACAACTGTTTCTGGATaGTCACTAGCCGTTCTTCCTCTGTCTCCATTGCCC +
Preference number: 6 (lower is better)
Translates to: PAEAPNTTTVSG*SLAVLPLSPLP
Trigger: GGGCAATGGAGACAGAGGAAGAACGGCTAGTGACCATCCAGAAACAGTTGTTGTATTGGGAGCTTCGGCGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS TCA 72 bp GAGGTTCCCATTGCTGGTGAACTCTACCAGGGCCTGTaGGAAACTCACAGTGGCATTCCCTTCCTTCTCAAC +
Preference number: 6 (lower is better)
Translates to: EVPIAGELYQGL*ETHSGIPFLLN
Trigger: GTTGAGAAGGAAGGGAATGCCACTGTGAGTTTCTCACAGGCCCTGGTAGAGTTCACCAGCAATGGGAACCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS CAA 72 bp CTGAGACCTTTCTTGGAGCTGCCTTTCCCAGAACCTTaGCTCCGTCCCCCTCCAAAGAAACTAGGCAGAGTA +
Preference number: 6 (lower is better)
Translates to: LRPFLELPFPEP*LRPPPKKLGRV
Trigger: TACTCTGCCTAGTTTCTTTGGAGGGGGACGGAGCAAAGGTTCTGGGAAAGGCAGCTCCAAGAAAGGTCTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS CAA 90 bp CAGTCCCAAGTATCGAGGGAGGCTGCTCACACCCCAGGGCAGGCCTaGGTAGAATCGACTATGGTAGTTGTTGAAGGCATGTTTGTGATA +
Preference number: 6 (lower is better)
Translates to: QSQVSREAAHTPGQA*VESTMVVVEGMFVI
Trigger: TATCACAAACATGCCTTCAACAACTACCATAGTCGATTCTACCAAGGCCTGCCCTGGGGTGTGAGCAGCCTCCCTCGATACTTGGGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS CAA 90 bp ACAACTGTTTCTGGATGGTCACTAGCCGTTCTTCCTCTGTCTCCATaGCCCCAGGTGGCCGGGAGGACAAAAAGGGCTCAAAGTTTAAGA +
Preference number: 6 (lower is better)
Translates to: TTVSGWSLAVLPLSP*PQVAGRTKRAQSLR
Trigger: TCTTAAACTTTGAGCCCTTTTTGTCCTCCCGGCCACCTGGGGCAATGGAGACAGAGGAAGAACGGCTAGTGACCATCCAGAAACAGTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS TCA 72 bp CATGGGAGGCAGCTCAGGGAGGTTTTGAGTGAAAGATaGGTCAGAGTCAGAGCTGCAGGACATGCTGGAAAA +
Preference number: 6 (lower is better)
Translates to: HGRQLREVLSER*VRVRAAGHAGK
Trigger: TTTTCCAGCATGTCCTGCAGCTCTGACTCTGACTCATCTTTCACTCAAAACCTCCCTGAGCTGCCTCCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS GCA 72 bp ATTGACATGGTCATAGGAGGTATGCAACAGGTTGCCTaGCTATATGGAGACTGGCTGGAAGGCCTGTCCAAC +
Preference number: 6 (lower is better)
Translates to: IDMVIGGMQQVA*LYGDWLEGLSN
Trigger: GTTGGACAGGCCTTCCAGCCAGTCTCCATATAGGCAGGCAACCTGTTGCATACCTCCTATGACCATGTCAAT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS CCA 72 bp GAGTACAGATACCCTTCTTGCCACCAAAGAGTTTCATaGCAGTTTTCTTCAGCCTACCTGGGCCGGATGAGG +
Preference number: 6 (lower is better)
Translates to: EYRYPSCHQRVS*QFSSAYLGRMR
Trigger: CCTCATCCGGCCCAGGTAGGCTGAAGAAAACTGCCATGAAACTCTTTGGTGGCAAGAAGGGTATCTGTACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS CCA 72 bp GGGCCTCACCTGAATCATCCTCAAATCCAGGTGTGGTaGAGTCATAATAACCTTCATCACTATTGGGGGCGG +
Preference number: 6 (lower is better)
Translates to: GPHLNHPQIQVW*SHNNLHHYWGR
Trigger: CCGCCCCCAATAGTGATGAAGGTTATTATGACTCCACCACACCTGGATTTGAGGATGATTCAGGTGAGGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS CAA 90 bp GCTGCAAGATCTTCATCATTGTGGAACTCAGGATTCTCTTCACACTaGCCTTCCCCATCCCGTTCCACATCAGCGATGTCAAAGGTCACC +
Preference number: 6 (lower is better)
Translates to: AARSSSLWNSGFSSH*PSPSRSTSAMSKVT
Trigger: GGTGACCTTTGACATCGCTGATGTGGAACGGGATGGGGAAGGCAAGTGTGAAGAGAATCCTGAGTTCCACAATGATGAAGATCTTGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS CAA 90 bp CTGATCCCCATTCACATGCTCAGGCCCCGTGTCCCTACTCCAGAATaGATAATAACTACTTGGCTAGGTTTCCATTCATGGCAGTGGAGG +
Preference number: 6 (lower is better)
Translates to: LIPIHMLRPRVPTPE*IITTWLGFHSWQWR
Trigger: CCTCCACTGCCATGAATGGAAACCTAGCCAAGTAGTTATTATCAATTCTGGAGTAGGGACACGGGGCCTGAGCATGTGAATGGGGATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS CCA 72 bp TCGACCATGGAGGTCATAAAGGCAGTCATCTCCAGGTaGAGAGTTCTCAAGGCTGTCATCTGGCTCATAGAA +
Preference number: 6 (lower is better)
Translates to: STMEVIKAVISR*RVLKAVIWLIE
Trigger: TTCTATGAGCCAGATGACAGCCTTGAGAACTCTCCACCTGGAGATGACTGCCTTTATGACCTCCATGGTCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS CAA 72 bp GTAGGCCCTCCTGGGAGATCCTCCAAAATTTGCTTCTaGCATGTCTGGCTCAAACATGGCATCACTCTGGAA +
Preference number: 6 (lower is better)
Translates to: VGPPGRSSKICF*HVWLKHGITLE
Trigger: TTCCAGAGTGATGCCATGTTTGAGCCAGACATGCAAGAAGCAAATTTTGGAGGATCTCCCAGGAGGGCCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS CAA 90 bp CTCAAACATGGCATCACTCTGGAAGAGCTGCATCAGGCAGGTACTTaGATCTTTCTTGGAGCAGGTTCCTTCATAACGCTTCTCCAGAGG +
Preference number: 6 (lower is better)
Translates to: LKHGITLEELHQAGT*IFLGAGSFITLLQR
Trigger: CCTCTGGAGAAGCGTTATGAAGGAACCTGCTCCAAGAAAGATCAAAGTACCTGCCTGATGCAGCTCTTCCAGAGTGATGCCATGTTTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS CAA 90 bp ATAAGTAGGGTAGGCCCTCCTGGGAGATCCTCCAAAATTTGCTTCTaGCATGTCTGGCTCAAACATGGCATCACTCTGGAAGAGCTGCAT +
Preference number: 6 (lower is better)
Translates to: ISRVGPPGRSSKICF*HVWLKHGITLEELH
Trigger: ATGCAGCTCTTCCAGAGTGATGCCATGTTTGAGCCAGACATGCAAGAAGCAAATTTTGGAGGATCTCCCAGGAGGGCCTACCCTACTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS TCA 72 bp AGGGCAGGCCTTGGTAGAATCGACTATGGTAGTTGTTaGAGGCATGTTTGTGATAGTAGCCCAGCTCAAAGG +
Preference number: 6 (lower is better)
Translates to: RAGLGRIDYGSC*RHVCDSSPAQR
Trigger: CCTTTGAGCTGGGCTACTATCACAAACATGCCTTCAACAACTACCATAGTCGATTCTACCAAGGCCTGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS GCA 72 bp CTTCATCATTGTGGAACTCAGGATTCTCTTCACACTTaGCTTCCCCATCCCGTTCCACATCAGCGATGTCAA +
Preference number: 6 (lower is better)
Translates to: LHHCGTQDSLHT*LPHPVPHQRCQ
Trigger: TTGACATCGCTGATGTGGAACGGGATGGGGAAGGCAAGTGTGAAGAGAATCCTGAGTTCCACAATGATGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS CCA 72 bp CTCCAAAATTTGCTTCTTGCATGTCTGGCTCAAACATaGCATCACTCTGGAAGAGCTGCATCAGGCAGGTAC +
Preference number: 6 (lower is better)
Translates to: LQNLLLACLAQT*HHSGRAASGRY
Trigger: GTACCTGCCTGATGCAGCTCTTCCAGAGTGATGCCATGTTTGAGCCAGACATGCAAGAAGCAAATTTTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS CCA 72 bp CCCCGTGTCCCTACTCCAGAATTGATAATAACTACTTaGCTAGGTTTCCATTCATGGCAGTGGAGGAGTAGC +
Preference number: 6 (lower is better)
Translates to: PRVPTPELIITT*LGFHSWQWRSS
Trigger: GCTACTCCTCCACTGCCATGAATGGAAACCTAGCCAAGTAGTTATTATCAATTCTGGAGTAGGGACACGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS CAA 72 bp GGCATCACTCTGGAAGAGCTGCATCAGGCAGGTACTTaGATCTTTCTTGGAGCAGGTTCCTTCATAACGCTT +
Preference number: 6 (lower is better)
Translates to: GITLEELHQAGT*IFLGAGSFITL
Trigger: AAGCGTTATGAAGGAACCTGCTCCAAGAAAGATCAAAGTACCTGCCTGATGCAGCTCTTCCAGAGTGATGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS CAA 72 bp TCTTCATCATTGTGGAACTCAGGATTCTCTTCACACTaGCCTTCCCCATCCCGTTCCACATCAGCGATGTCA +
Preference number: 6 (lower is better)
Translates to: SSSLWNSGFSSH*PSPSRSTSAMS
Trigger: TGACATCGCTGATGTGGAACGGGATGGGGAAGGCAAGTGTGAAGAGAATCCTGAGTTCCACAATGATGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS CCA 72 bp GAATTGATAATAACTACTTGGCTAGGTTTCCATTCATaGCAGTGGAGGAGTAGCTGGTGGCAAGAGAGGCAC +
Preference number: 6 (lower is better)
Translates to: ELIITTWLGFHS*QWRSSWWQERH
Trigger: GTGCCTCTCTTGCCACCAGCTACTCCTCCACTGCCATGAATGGAAACCTAGCCAAGTAGTTATTATCAATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374869.8
CDS CAA 72 bp ATTCACATGCTCAGGCCCCGTGTCCCTACTCCAGAATaGATAATAACTACTTGGCTAGGTTTCCATTCATGG +
Preference number: 6 (lower is better)
Translates to: IHMLRPRVPTPE*IITTWLGFHSW
Trigger: CCATGAATGGAAACCTAGCCAAGTAGTTATTATCAATTCTGGAGTAGGGACACGGGGCCTGAGCATGTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374869.8