RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AIFM1 (Homo sapiens)

Ensembl gene IDs: ENSG00000156709

Ensembl transcript IDs: ENST00000287295.8, ENST00000319908.8, ENST00000416073.7, ENST00000460436.6, ENST00000527892.5, ENST00000529877.1, ENST00000533719.2, ENST00000535724.6, ENST00000674546.1, ENST00000674555.1, ENST00000674582.1, ENST00000674591.1, ENST00000674722.1, ENST00000674957.1, ENST00000674997.1, ENST00000675015.1, ENST00000675037.1, ENST00000675050.1, ENST00000675092.1, ENST00000675240.1, ENST00000675774.1, ENST00000676048.1, ENST00000676144.1, ENST00000676229.1

Found 777 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGAGTCAGGGAAGGACGTACAGAAGGGATATGGCAGCAGCCAAACTaGAGAGGAGCGGGAAAGGGAAGGGGCAGTGGGGGAAGGGAGGGG +
Preference number: 1 (lower is better)
Translates to: GVREGRTEGIWQQPN*RGAGKGRGSGGREG
Trigger: CCCCTCCCTTCCCCCACTGCCCCTTCCCTTTCCCGCTCCTCTCCAGTTTGGCTGCTGCCATATCCCTTCTGTACGTCCTTCCCTGACTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675050.1
3UTR CCA 90 bp GATCTAGCTGTGAGTGCCAGGCCAGTTGGTAGCAACACCAAGTCCTaGCCGACAGTACCGGGCGAGCTTCCAGAGACGCCAGAGGCTGCT +
Preference number: 1 (lower is better)
Translates to: DLAVSARPVGSNTKS*PTVPGELPETPEAA
Trigger: AGCAGCCTCTGGCGTCTCTGGAAGCTCGCCCGGTACTGTCGGCCAGGACTTGGTGTTGCTACCAACTGGCCTGGCACTCACAGCTAGATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675050.1
3UTR CCA 90 bp GAGATAGTGAACTTCCTGAGAGGAGAGGAGGGGAGTCAAGTGTTGTaGGCCGAGGCCACAGCAGGTGTGTGCAAAGAGGTCTGGAGGGGT +
Preference number: 1 (lower is better)
Translates to: EIVNFLRGEEGSQVL*AEATAGVCKEVWRG
Trigger: ACCCCTCCAGACCTCTTTGCACACACCTGCTGTGGCCTCGGCCCACAACACTTGACTCCCCTCCTCTCCTCTCAGGAAGTTCACTATCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
3UTR CCA 90 bp CGAGTCCCAACAATCTCTAGGGCAGCAAGGGTGCCTGGCTTTAGGTaGAGTCAGGGAAGGACGTACAGAAGGGATATGGCAGCAGCCAAA +
Preference number: 1 (lower is better)
Translates to: RVPTISRAARVPGFR*SQGRTYRRDMAAAK
Trigger: TTTGGCTGCTGCCATATCCCTTCTGTACGTCCTTCCCTGACTCCACCTAAAGCCAGGCACCCTTGCTGCCCTAGAGATTGTTGGGACTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675050.1
3UTR CCA 90 bp CAAGTGTTGTGGGCCGAGGCCACAGCAGGTGTGTGCAAAGAGGTCTaGAGGGGTGAGGGAAGTTCGGAAATGAAAGGAGTTTTGCGTCTG +
Preference number: 1 (lower is better)
Translates to: QVLWAEATAGVCKEV*RGEGSSEMKGVLRL
Trigger: CAGACGCAAAACTCCTTTCATTTCCGAACTTCCCTCACCCCTCCAGACCTCTTTGCACACACCTGCTGTGGCCTCGGCCCACAACACTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
3UTR CCA 90 bp TTTTGTGTACGCGTGTCTGTGCCCGCCAGGAATTCCCTGATAAGATaGGAAAGAGACCAGAGGCAGTCTTACTTCACCTCTGGGCCCAGC +
Preference number: 1 (lower is better)
Translates to: FCVRVSVPARNSLIR*ERDQRQSYFTSGPS
Trigger: GCTGGGCCCAGAGGTGAAGTAAGACTGCCTCTGGTCTCTTTCCCATCTTATCAGGGAATTCCTGGCGGGCACAGACACGCGTACACAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675050.1
3UTR CCA 90 bp GTCACACCCATACGTAGAACCAGCCAGGCAGGGGAACGTCATCACTaGCTTGGGCTGAGTGTATCTGTGTGTGGTTTTGTGTACGCGTGT +
Preference number: 1 (lower is better)
Translates to: VTPIRRTSQAGERHH*LGLSVSVCGFVYAC
Trigger: ACACGCGTACACAAAACCACACACAGATACACTCAGCCCAAGCCAGTGATGACGTTCCCCTGCCTGGCTGGTTCTACGTATGGGTGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675050.1
3UTR TCA 90 bp GGACAGATGTCTGGCATGAGGACAGCAGGCAGAAGAGTCAAGAGATaGTGGTCCTTCCATGAGTCCGTCTCCAGGTTTAACTGTGAAGCA +
Preference number: 1 (lower is better)
Translates to: GQMSGMRTAGRRVKR*WSFHESVSRFNCEA
Trigger: TGCTTCACAGTTAAACCTGGAGACGGACTCATGGAAGGACCATCATCTCTTGACTCTTCTGCCTGCTGTCCTCATGCCAGACATCTGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
3UTR CCA 90 bp GGAAGTCATGGGCTAGCAGGGAGACACATACACAAGGATGAGGCTTaGAAGGCTGGGAAAGTCTTCAGAGATAGTGAACTTCCTGAGAGG +
Preference number: 1 (lower is better)
Translates to: GSHGLAGRHIHKDEA*KAGKVFRDSELPER
Trigger: CCTCTCAGGAAGTTCACTATCTCTGAAGACTTTCCCAGCCTTCCAAGCCTCATCCTTGTGTATGTGTCTCCCTGCTAGCCCATGACTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
3UTR TCA 90 bp TTCCATGAGTCCGTCTCCAGGTTTAACTGTGAAGCACCAGGTCTCTaGACTCAGATTTGTAGTAAGTGCCCTTTCTGTCCCCTGCAGGAC +
Preference number: 1 (lower is better)
Translates to: FHESVSRFNCEAPGL*TQICSKCPFCPLQD
Trigger: GTCCTGCAGGGGACAGAAAGGGCACTTACTACAAATCTGAGTTCAGAGACCTGGTGCTTCACAGTTAAACCTGGAGACGGACTCATGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
3UTR TCA 90 bp CGTATTTCAGAGAAAAGGAGCTTAAGAGAGGACAGATGTCTGGCATaGGGACAGCAGGCAGAAGAGTCAAGAGATGATGGTCCTTCCATG +
Preference number: 1 (lower is better)
Translates to: RISEKRSLREDRCLA*GQQAEESRDDGPSM
Trigger: CATGGAAGGACCATCATCTCTTGACTCTTCTGCCTGCTGTCCTCATGCCAGACATCTGTCCTCTCTTAAGCTCCTTTTCTCTGAAATACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
3UTR GCA 90 bp AATACATGGCTGAGAAAAATCCTGTGCTTGGTCGGTGCTGCAATTTaGTTGCTTTCTAATATGCGTGGCTTTCCACCTTCACCCACCTGC +
Preference number: 1 (lower is better)
Translates to: NTWLRKILCLVGAAI*LLSNMRGFPPSPTC
Trigger: GCAGGTGGGTGAAGGTGGAAAGCCACGCATATTAGAAAGCAAGCAAATTGCAGCACCGACCAAGCACAGGATTTTTCTCAGCCATGTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
3UTR CCA 90 bp GTATTGTTCGGTATACCTGTACTGCAAATTCTTACGGTGGAGATTTaGCCTGTTCTCCCAGTGTTCAGAAGGGATTTGGTTGAAGCTGAA +
Preference number: 1 (lower is better)
Translates to: VLFGIPVLQILTVEI*PVLPVFRRDLVEAE
Trigger: TTCAGCTTCAACCAAATCCCTTCTGAACACTGGGAGAACAGGCCAAATCTCCACCGTAAGAATTTGCAGTACAGGTATACCGAACAATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676229.1
3UTR TCA 90 bp TTAAGGAAGTCAGGCTTTGTTCTGGACTGGATGCTGGTGATTCTGTaGTTGGATTGGGTATCTTATCAACTCAATCTTATCCAAGAGGAA +
Preference number: 1 (lower is better)
Translates to: LRKSGFVLDWMLVIL*LDWVSYQLNLIQEE
Trigger: TTCCTCTTGGATAAGATTGAGTTGATAAGATACCCAATCCAATCACAGAATCACCAGCATCCAGTCCAGAACAAAGCCTGACTTCCTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675050.1
3UTR-3UTR CCA 90 bp GTCCTCCCCCTGGACGGGAGCCTGTGGAACTGCCGGGGTGCTGGGAGGAATAGTCTGGACGGGAGCCTGTaGAACTGCCGGGGTGCTGGG +
Preference number: 2 (lower is better)
Translates to: VLPLDGSLWNCRGAGRNSLDGSL*NCRGAG
Trigger: CCCAGCACCCCGGCAGTTCCACAGGCTCCCGTCCAG...ACTATTCCTCCCAGCACCCCGGCAGTTCCACAGGCTCCCGTCCAGGGGGAGGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
ENST00000675037.1
3UTR-3UTR GCA 90 bp GTCCTCCCCCTGGACGGGAGCCTGTGGAACTGCCGGGGTGCTGGGAGGAATAGTGGGCTGCAGTGGGTTTaGCAATTCCACTGTGGGGCT +
Preference number: 2 (lower is better)
Translates to: VLPLDGSLWNCRGAGRNSGLQWV*QFHCGA
Trigger: AGCCCCACAGTGGAATTGGCAAACCCACTGCAGCCC...ACTATTCCTCCCAGCACCCCGGCAGTTCCACAGGCTCCCGTCCAGGGGGAGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
ENST00000675037.1
3UTR-3UTR GCA 90 bp GTCCTCCCCCTGGACGGGAGCCTGTGGAACTGCCGGGGTGCTGGGAGGAATAGTCCTCCTCTCAGGGGCTaGAGTGGGTTTGCCAATTCC +
Preference number: 2 (lower is better)
Translates to: VLPLDGSLWNCRGAGRNSPPLRG*SGFANS
Trigger: GGAATTGGCAAACCCACTGCAGCCCCTGAGAGGAGG...ACTATTCCTCCCAGCACCCCGGCAGTTCCACAGGCTCCCGTCCAGGGGGAGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
ENST00000675037.1
3UTR-3UTR CCA 90 bp GTCCTCCCCCTGGACGGGAGCCTGTGGAACTGCCGGGGTGCTGGGAGGAATAGTATACAATCAGTACCCTaGCCCCAGGATCCCGAGCCC +
Preference number: 2 (lower is better)
Translates to: VLPLDGSLWNCRGAGRNSIQSVP*PQDPEP
Trigger: GGGCTCGGGATCCTGGGGCCAGGGTACTGATTGTAT...ACTATTCCTCCCAGCACCCCGGCAGTTCCACAGGCTCCCGTCCAGGGGGAGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000527892.5
ENST00000674555.1
ENST00000674997.1
3UTR-3UTR CCA 90 bp GTCCTCCCCCTGGACGGGAGCCTGTGGAACTGCCGGGGTGCTGGGAGGAATAGTTGGCCAACTCAACATTaGGCTCCAGGCCCACAGCTG +
Preference number: 2 (lower is better)
Translates to: VLPLDGSLWNCRGAGRNSWPTQH*APGPQL
Trigger: CAGCTGTGGGCCTGGAGCCCAATGTTGAGTTGGCCA...ACTATTCCTCCCAGCACCCCGGCAGTTCCACAGGCTCCCGTCCAGGGGGAGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
3UTR-3UTR TCA 90 bp GTCCTCCCCCTGGACGGGAGCCTGTGGAACTGCCGGGGTGCTGGGAGGAATAGTCCATGGTCCAGTTGCTaGGGTATTCGGGGAGGATCT +
Preference number: 2 (lower is better)
Translates to: VLPLDGSLWNCRGAGRNSPWSSC*GIRGGS
Trigger: AGATCCTCCCCGAATACCTCAGCAACTGGACCATGG...ACTATTCCTCCCAGCACCCCGGCAGTTCCACAGGCTCCCGTCCAGGGGGAGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674997.1
3UTR-3UTR GCA 90 bp GTCCTCCCCCTGGACGGGAGCCTGTGGAACTGCCGGGGTGCTGGGAGGAATAGTGCATGCAGCATCTCCTaGCACCCAGATGTTAGAGCG +
Preference number: 2 (lower is better)
Translates to: VLPLDGSLWNCRGAGRNSACSIS*HPDVRA
Trigger: CGCTCTAACATCTGGGTGGCAGGAGATGCTGCATGC...ACTATTCCTCCCAGCACCCCGGCAGTTCCACAGGCTCCCGTCCAGGGGGAGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
3UTR-3UTR CCA 90 bp GCCACAGCAGGTGTGTGCAAAGAGGTCTGGAGGGGTGAGGGAAGTTCGGAAATGCTGGACGGGAGCCTGTaGAACTGCCGGGGTGCTGGG +
Preference number: 2 (lower is better)
Translates to: ATAGVCKEVWRGEGSSEMLDGSL*NCRGAG
Trigger: CCCAGCACCCCGGCAGTTCCACAGGCTCCCGTCCAG...CATTTCCGAACTTCCCTCACCCCTCCAGACCTCTTTGCACACACCTGCTGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674957.1
3UTR-3UTR TCA 90 bp GTCCTCCCCCTGGACGGGAGCCTGTGGAACTGCCGGGGTGCTGGGAGGAATAGTCTTGGCGCCTTGTCTTaGGGAACTTCCTCTCCTTCT +
Preference number: 2 (lower is better)
Translates to: VLPLDGSLWNCRGAGRNSLGALS*GTSSPS
Trigger: AGAAGGAGAGGAAGTTCCTCAAGACAAGGCGCCAAG...ACTATTCCTCCCAGCACCCCGGCAGTTCCACAGGCTCCCGTCCAGGGGGAGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000527892.5
ENST00000674555.1
ENST00000674997.1
3UTR-3UTR TCA 90 bp TCTGTGCCCAAGGCTCGAGAGGACAGTGGGCATGAGGGCCTCGGTGCTCAAGTTAGAGGACAGTGGGCATaGGGGCCTCGGTGCTCAAGT +
Preference number: 2 (lower is better)
Translates to: SVPKAREDSGHEGLGAQVRGQWA*GPRCSS
Trigger: ACTTGAGCACCGAGGCCCTCATGCCCACTGTCCTCT...AACTTGAGCACCGAGGCCCTCATGCCCACTGTCCTCTCGAGCCTTGGGCACAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527892.5
ENST00000535724.6
3UTR-3UTR CCA 90 bp TCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCAGGCCCACACTGGACGGGAGCCTGTaGAACTGCCGGGGTGCTGGG +
Preference number: 2 (lower is better)
Translates to: SISRPPVLANSTLGSRPTLDGSL*NCRGAG
Trigger: CCCAGCACCCCGGCAGTTCCACAGGCTCCCGTCCAG...TGTGGGCCTGGAGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
3UTR-3UTR TCA 90 bp TGCCCAAGGCTCGAGAGGACAGTGGGCATGAGGGCCTCGGTGCTCAAGTTCATTAGAGGACAGTGGGCATaGGGGCCTCGGTGCTCAAGT +
Preference number: 2 (lower is better)
Translates to: CPRLERTVGMRASVLKFIRGQWA*GPRCSS
Trigger: ACTTGAGCACCGAGGCCCTCATGCCCACTGTCCTCT...AATGAACTTGAGCACCGAGGCCCTCATGCCCACTGTCCTCTCGAGCCTTGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527892.5
ENST00000535724.6
3UTR-3UTR GCA 90 bp GTCCTCCCCCTGGACGGGAGCCTGTGGAACTGCCGGGGTGCTGGGAGGAATAGTCAGCAAAAGCAGCTGTaGCTCCACCAATTAGCAGGA +
Preference number: 2 (lower is better)
Translates to: VLPLDGSLWNCRGAGRNSQQKQL*LHQLAG
Trigger: TCCTGCTAATTGGTGGAGGCACAGCTGCTTTTGCTG...ACTATTCCTCCCAGCACCCCGGCAGTTCCACAGGCTCCCGTCCAGGGGGAGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000527892.5
ENST00000674555.1
ENST00000674997.1
3UTR-3UTR GCA 90 bp GTCCTCCCCCTGGACGGGAGCCTGTGGAACTGCCGGGGTGCTGGGAGGAATAGTTCTACTCTTCACCTCTaGTCCAGCCCTATCAATGGC +
Preference number: 2 (lower is better)
Translates to: VLPLDGSLWNCRGAGRNSSTLHL*SSPING
Trigger: GCCATTGATAGGGCTGGAGCAGAGGTGAAGAGTAGA...ACTATTCCTCCCAGCACCCCGGCAGTTCCACAGGCTCCCGTCCAGGGGGAGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000527892.5
ENST00000674555.1
ENST00000674997.1
3UTR-3UTR CCA 90 bp TCTGTGCCCAAGGCTCGAGAGGACAGTGGGCATGAGGGCCTCGGTGCTCAAGTTTGGCCAACTCAACATTaGGCTCCAGGCCCACAGCTG +
Preference number: 2 (lower is better)
Translates to: SVPKAREDSGHEGLGAQVWPTQH*APGPQL
Trigger: CAGCTGTGGGCCTGGAGCCCAATGTTGAGTTGGCCA...AACTTGAGCACCGAGGCCCTCATGCCCACTGTCCTCTCGAGCCTTGGGCACAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527892.5
ENST00000535724.6
3UTR-3UTR TCA 90 bp GTCCTCCCCCTGGACGGGAGCCTGTGGAACTGCCGGGGTGCTGGGAGGAATAGTATCACTCCAGAACATTaGCTGATGCCAGTACGGCTT +
Preference number: 2 (lower is better)
Translates to: VLPLDGSLWNCRGAGRNSITPEH*LMPVRL
Trigger: AAGCCGTACTGGCATCAGTCAATGTTCTGGAGTGAT...ACTATTCCTCCCAGCACCCCGGCAGTTCCACAGGCTCCCGTCCAGGGGGAGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
3UTR-3UTR TCA 90 bp GTCCTCCCCCTGGACGGGAGCCTGTGGAACTGCCGGGGTGCTGGGAGGAATAGTAGGAATAGTAATTTCTaGGGCCTCGGACTCTGTCTC +
Preference number: 2 (lower is better)
Translates to: VLPLDGSLWNCRGAGRNSRNSNF*GLGLCL
Trigger: GAGACAGAGTCCGAGGCCTCAGAAATTACTATTCCT...ACTATTCCTCCCAGCACCCCGGCAGTTCCACAGGCTCCCGTCCAGGGGGAGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
ENST00000675037.1
3UTR-3UTR TCA 90 bp TCTGTGCCCAAGGCTCGAGAGGACAGTGGGCATGAGGGCCTCGGTGCTCAAGTTCTACCTTCTTCCCAGTaGGGACAGCCACACCACCAT +
Preference number: 2 (lower is better)
Translates to: SVPKAREDSGHEGLGAQVLPSSQ*GQPHHH
Trigger: ATGGTGGTGTGGCTGTCCTCACTGGGAAGAAGGTAG...AACTTGAGCACCGAGGCCCTCATGCCCACTGTCCTCTCGAGCCTTGGGCACAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527892.5
3UTR-3UTR CCA 90 bp CTCCCCCTGGACGGGAGCCTGTGGAACTGCCGGGGTGCTGGGAGGAATAGTAATTCTCAGGGGCTGCAGTaGGTTTGCCAATTCCACTGT +
Preference number: 2 (lower is better)
Translates to: LPLDGSLWNCRGAGRNSNSQGLQ*VCQFHC
Trigger: ACAGTGGAATTGGCAAACCCACTGCAGCCCCTGAGA...ATTACTATTCCTCCCAGCACCCCGGCAGTTCCACAGGCTCCCGTCCAGGGGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
ENST00000675037.1
3UTR-3UTR CCA 90 bp GTCCTCCCCCTGGACGGGAGCCTGTGGAACTGCCGGGGTGCTGGGAGGAATAGTTTCCTGACTGCTCTGTaGCAGATTTGGGGTTGTCTT +
Preference number: 2 (lower is better)
Translates to: VLPLDGSLWNCRGAGRNSFLTAL*QIWGCL
Trigger: AAGACAACCCCAAATCTGCCACAGAGCAGTCAGGAA...ACTATTCCTCCCAGCACCCCGGCAGTTCCACAGGCTCCCGTCCAGGGGGAGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
ENST00000675037.1
3UTR-3UTR TCA 90 bp GTCCTCCCCCTGGACGGGAGCCTGTGGAACTGCCGGGGTGCTGGGAGGAATAGTGTTTGGCTACTTCATTaGGATCTTCATGCTGCTCAC +
Preference number: 2 (lower is better)
Translates to: VLPLDGSLWNCRGAGRNSVWLLH*DLHAAH
Trigger: GTGAGCAGCATGAAGATCTCAATGAAGTAGCCAAAC...ACTATTCCTCCCAGCACCCCGGCAGTTCCACAGGCTCCCGTCCAGGGGGAGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
ENST00000675037.1
3UTR-3UTR TCA 90 bp TGCCCAAGGCTCGAGAGGACAGTGGGCATGAGGGCCTCGGTGCTCAAGTTCATTCCATGGTCCAGTTGCTaGGGTATTCGGGGAGGATCT +
Preference number: 2 (lower is better)
Translates to: CPRLERTVGMRASVLKFIPWSSC*GIRGGS
Trigger: AGATCCTCCCCGAATACCTCAGCAACTGGACCATGG...AATGAACTTGAGCACCGAGGCCCTCATGCCCACTGTCCTCTCGAGCCTTGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527892.5
ENST00000535724.6
3UTR-3UTR CCA 90 bp TGCCCAAGGCTCGAGAGGACAGTGGGCATGAGGGCCTCGGTGCTCAAGTTCATTCCAGGCCACCAGTCTTaGCCAACTCAACATTGGGCT +
Preference number: 2 (lower is better)
Translates to: CPRLERTVGMRASVLKFIPGHQS*PTQHWA
Trigger: AGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGG...AATGAACTTGAGCACCGAGGCCCTCATGCCCACTGTCCTCTCGAGCCTTGGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527892.5
ENST00000535724.6
3UTR-3UTR CCA 90 bp CGAGTCCCAACAATCTCTAGGGCAGCAAGGGTGCCTGGCTTTAGGTGGAGTCAGTGGCAGCAGCCAAACTaGAGAGGAGCGGGAAAGGGA +
Preference number: 2 (lower is better)
Translates to: RVPTISRAARVPGFRWSQWQQPN*RGAGKG
Trigger: TCCCTTTCCCGCTCCTCTCCAGTTTGGCTGCTGCCA...CTGACTCCACCTAAAGCCAGGCACCCTTGCTGCCCTAGAGATTGTTGGGACTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675050.1
3UTR CAA 90 bp TCAGAGATAGTGAACTTCCTGAGAGGAGAGGAGGGGAGTCAAGTGTaGTGGGCCGAGGCCACAGCAGGTGTGTGCAAAGAGGTCTGGAGG +
Preference number: 2 (lower is better)
Translates to: SEIVNFLRGEEGSQV*WAEATAGVCKEVWR
Trigger: CCTCCAGACCTCTTTGCACACACCTGCTGTGGCCTCGGCCCACAACACTTGACTCCCCTCCTCTCCTCTCAGGAAGTTCACTATCTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
3UTR-3UTR TCA 90 bp CTCCCCCTGGACGGGAGCCTGTGGAACTGCCGGGGTGCTGGGAGGAATAGTAATATCACTCCAGAACATTaGCTGATGCCAGTACGGCTT +
Preference number: 2 (lower is better)
Translates to: LPLDGSLWNCRGAGRNSNITPEH*LMPVRL
Trigger: AAGCCGTACTGGCATCAGTCAATGTTCTGGAGTGAT...ATTACTATTCCTCCCAGCACCCCGGCAGTTCCACAGGCTCCCGTCCAGGGGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
3UTR-3UTR TCA 90 bp CTCCCCCTGGACGGGAGCCTGTGGAACTGCCGGGGTGCTGGGAGGAATAGTAATTTAAGCTTCAGATGGTaGACTCTGTGCACTTCCACC +
Preference number: 2 (lower is better)
Translates to: LPLDGSLWNCRGAGRNSNLSFRW*TLCTST
Trigger: GGTGGAAGTGCACAGAGTTCACCATCTGAAGCTTAA...ATTACTATTCCTCCCAGCACCCCGGCAGTTCCACAGGCTCCCGTCCAGGGGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527892.5
ENST00000535724.6
3UTR-3UTR TCA 90 bp GTCCTCCCCCTGGACGGGAGCCTGTGGAACTGCCGGGGTGCTGGGAGGAATAGTAAACCACAGTTCTTTTaGAAGAGGAGGTCGCATGTA +
Preference number: 2 (lower is better)
Translates to: VLPLDGSLWNCRGAGRNSKPQFF*KRRSHV
Trigger: TACATGCGACCTCCTCTTTCAAAAGAACTGTGGTTT...ACTATTCCTCCCAGCACCCCGGCAGTTCCACAGGCTCCCGTCCAGGGGGAGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000527892.5
ENST00000674555.1
ENST00000674997.1
3UTR-3UTR GCA 90 bp CTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCAGGCGGGCTGCAGTGGGTTTaGCAATTCCACTGTGGGGCT +
Preference number: 2 (lower is better)
Translates to: LSLFPGHQSWPTQHWAPGGLQWV*QFHCGA
Trigger: AGCCCCACAGTGGAATTGGCAAACCCACTGCAGCCC...GCCTGGAGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
3UTR-3UTR GCA 90 bp GTGTCTGTGCCCGCCAGGAATTCCCTGATAAGATGGGAAAGAGACCAGAGGCAGCCTCCTCTCAGGGGCTaGAGTGGGTTTGCCAATTCC +
Preference number: 2 (lower is better)
Translates to: VSVPARNSLIRWERDQRQPPLRG*SGFANS
Trigger: GGAATTGGCAAACCCACTGCAGCCCCTGAGAGGAGG...CTGCCTCTGGTCTCTTTCCCATCTTATCAGGGAATTCCTGGCGGGCACAGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675050.1
3UTR-3UTR GCA 90 bp GTCCTCCCCCTGGACGGGAGCCTGTGGAACTGCCGGGGTGCTGGGAGGAATAGTTTGAGATCTTCATGCTaGTCACCGTCCTTAATGATC +
Preference number: 2 (lower is better)
Translates to: VLPLDGSLWNCRGAGRNSLRSSC*SPSLMI
Trigger: GATCATTAAGGACGGTGAGCAGCATGAAGATCTCAA...ACTATTCCTCCCAGCACCCCGGCAGTTCCACAGGCTCCCGTCCAGGGGGAGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
ENST00000675037.1
3UTR-3UTR CCA 90 bp GTCCTCCCCCTGGACGGGAGCCTGTGGAACTGCCGGGGTGCTGGGAGGAATAGTCAAAAACACCAACTGTaGGCAAACTACTGTCCACAA +
Preference number: 2 (lower is better)
Translates to: VLPLDGSLWNCRGAGRNSQKHQL*ANYCPQ
Trigger: TTGTGGACAGTAGTTTGCCCACAGTTGGTGTTTTTG...ACTATTCCTCCCAGCACCCCGGCAGTTCCACAGGCTCCCGTCCAGGGGGAGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
ENST00000675037.1
3UTR-3UTR TCA 90 bp TGCCCAAGGCTCGAGAGGACAGTGGGCATGAGGGCCTCGGTGCTCAAGTTCATTTCGGATACCAGTTCCTaGCTGCTCTGTGGCAGATTT +
Preference number: 2 (lower is better)
Translates to: CPRLERTVGMRASVLKFISDTSS*LLCGRF
Trigger: AAATCTGCCACAGAGCAGTCAGGAACTGGTATCCGA...AATGAACTTGAGCACCGAGGCCCTCATGCCCACTGTCCTCTCGAGCCTTGGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527892.5
ENST00000535724.6
3UTR-3UTR TCA 90 bp TCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCAGGCCCACACCATGGTCCAGTTGCTaGGGTATTCGGGGAGGATCT +
Preference number: 2 (lower is better)
Translates to: SISRPPVLANSTLGSRPTPWSSC*GIRGGS
Trigger: AGATCCTCCCCGAATACCTCAGCAACTGGACCATGG...TGTGGGCCTGGAGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674997.1
3UTR-3UTR GCA 90 bp GTGGTTTTGTGTACGCGTGTCTGTGCCCGCCAGGAATTCCCTGATAAGATGGGACTAGGGCAGCAAGGGTaGCTGGCTTTAGGTGGAGTC +
Preference number: 2 (lower is better)
Translates to: VVLCTRVCARQEFPDKMGLGQQG*LALGGV
Trigger: GACTCCACCTAAAGCCAGGCACCCTTGCTGCCCTAG...TCCCATCTTATCAGGGAATTCCTGGCGGGCACAGACACGCGTACACAAAACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675050.1
3UTR-3UTR GCA 90 bp CTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCAGGCCCACCTTCACCCACCTaGCCCCTTGACAAGAGAACA +
Preference number: 2 (lower is better)
Translates to: LSLFPGHQSWPTQHWAPGPPSPT*PLDKRT
Trigger: TGTTCTCTTGTCAAGGGGGCAGGTGGGTGAAGGTGG...GCCTGGAGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674957.1
3UTR-3UTR CCA 90 bp CACATCCAGCTGTACTACCTTCTTCCCAGTGAGGACAGCCACACCACCATTCTCGAGCCCGGATGGATCTaGCTGCAGCAAAAGCAGCTG +
Preference number: 2 (lower is better)
Translates to: HIQLYYLLPSEDSHTTILEPGWI*LQQKQL
Trigger: CAGCTGCTTTTGCTGCAGCCAGATCCATCCGGGCTC...GAGAATGGTGGTGTGGCTGTCCTCACTGGGAAGAAGGTAGTACAGCTGGATGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527892.5
ENST00000674555.1
ENST00000674997.1
ENST00000675774.1
ENST00000676144.1
3UTR-3UTR CCA 90 bp CACATCCAGCTGTACTACCTTCTTCCCAGTGAGGACAGCCACACCACCATTCTCGATCCCGAGCCCGGATaGATCTGGCTGCAGCAAAAG +
Preference number: 2 (lower is better)
Translates to: HIQLYYLLPSEDSHTTILDPEPG*IWLQQK
Trigger: CTTTTGCTGCAGCCAGATCCATCCGGGCTCGGGATC...GAGAATGGTGGTGTGGCTGTCCTCACTGGGAAGAAGGTAGTACAGCTGGATGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527892.5
ENST00000674555.1
ENST00000674997.1
ENST00000675774.1
ENST00000676144.1
3UTR-3UTR CCA 90 bp CACATCCAGCTGTACTACCTTCTTCCCAGTGAGGACAGCCACACCACCATTCTCATACAATCAGTACCCTaGCCCCAGGATCCCGAGCCC +
Preference number: 2 (lower is better)
Translates to: HIQLYYLLPSEDSHTTILIQSVP*PQDPEP
Trigger: GGGCTCGGGATCCTGGGGCCAGGGTACTGATTGTAT...GAGAATGGTGGTGTGGCTGTCCTCACTGGGAAGAAGGTAGTACAGCTGGATGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527892.5
ENST00000674555.1
ENST00000674997.1
ENST00000675774.1
ENST00000676144.1
3UTR-3UTR CCA 90 bp CTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCAGGCCCAGGCCACCAGTCTTaGCCAACTCAACATTGGGCT +
Preference number: 2 (lower is better)
Translates to: LSLFPGHQSWPTQHWAPGPGHQS*PTQHWA
Trigger: AGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGG...GCCTGGAGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
3UTR-3UTR CCA 90 bp CTCCCTGTCCTCTTTGACCTAGTCACACCCATACGTAGAACCAGCCAGGCAGGGCAGAAAGCAAGGCACTaGGAGCGAGTCCCAACAATC +
Preference number: 2 (lower is better)
Translates to: LPVLFDLVTPIRRTSQAGQKARH*ERVPTI
Trigger: GATTGTTGGGACTCGCTCCCAGTGCCTTGCTTTCTG...CCCTGCCTGGCTGGTTCTACGTATGGGTGTGACTAGGTCAAAGAGGACAGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675050.1
3UTR-3UTR TCA 90 bp CTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCAGGCCTTGGCGCCTTGTCTTaGGGAACTTCCTCTCCTTCT +
Preference number: 2 (lower is better)
Translates to: LSLFPGHQSWPTQHWAPGLGALS*GTSSPS
Trigger: AGAAGGAGAGGAAGTTCCTCAAGACAAGGCGCCAAG...GCCTGGAGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527892.5
ENST00000674555.1
ENST00000674997.1
3UTR-3UTR TCA 90 bp CACATCCAGCTGTACTACCTTCTTCCCAGTGAGGACAGCCACACCACCATTCTCCCATGGTCCAGTTGCTaGGGTATTCGGGGAGGATCT +
Preference number: 2 (lower is better)
Translates to: HIQLYYLLPSEDSHTTILPWSSC*GIRGGS
Trigger: AGATCCTCCCCGAATACCTCAGCAACTGGACCATGG...GAGAATGGTGGTGTGGCTGTCCTCACTGGGAAGAAGGTAGTACAGCTGGATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527892.5
ENST00000674555.1
ENST00000674997.1
ENST00000676144.1
3UTR-3UTR TCA 90 bp CTCACATCCAGCTGTACTACCTTCTTCCCAGTGAGGACAGCCACACCACCATTCCCATGGTCCAGTTGCTaGGGTATTCGGGGAGGATCT +
Preference number: 2 (lower is better)
Translates to: LTSSCTTFFPVRTATPPFPWSSC*GIRGGS
Trigger: AGATCCTCCCCGAATACCTCAGCAACTGGACCATGG...GAATGGTGGTGTGGCTGTCCTCACTGGGAAGAAGGTAGTACAGCTGGATGTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527892.5
ENST00000674555.1
ENST00000674997.1
ENST00000676144.1
3UTR-3UTR GCA 90 bp AACTGCTGGCCCCAGATTAAGCTTCAGATGGTGAACTCTGTGCACTTCCACCCACCTCCTCTCAGGGGCTaGAGTGGGTTTGCCAATTCC +
Preference number: 2 (lower is better)
Translates to: NCWPQIKLQMVNSVHFHPPPLRG*SGFANS
Trigger: GGAATTGGCAAACCCACTGCAGCCCCTGAGAGGAGG...TGGGTGGAAGTGCACAGAGTTCACCATCTGAAGCTTAATCTGGGGCCAGCAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527892.5
ENST00000535724.6
3UTR-3UTR GCA 90 bp GATGATGGTCCTTCCATGAGTCCGTCTCCAGGTTTAACTGTGAAGCACCAGGTCCCTCCTCTCAGGGGCTaGAGTGGGTTTGCCAATTCC +
Preference number: 2 (lower is better)
Translates to: DDGPSMSPSPGLTVKHQVPPLRG*SGFANS
Trigger: GGAATTGGCAAACCCACTGCAGCCCCTGAGAGGAGG...GACCTGGTGCTTCACAGTTAAACCTGGAGACGGACTCATGGAAGGACCATCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
3UTR-3UTR GCA 90 bp TCTGTGCCCAAGGCTCGAGAGGACAGTGGGCATGAGGGCCTCGGTGCTCAAGTTAACAGGTATCAGAACTaGTGGCCCCAGATTAAGCTT +
Preference number: 2 (lower is better)
Translates to: SVPKAREDSGHEGLGAQVNRYQN*WPQIKL
Trigger: AAGCTTAATCTGGGGCCAGCAGTTCTGATACCTGTT...AACTTGAGCACCGAGGCCCTCATGCCCACTGTCCTCTCGAGCCTTGGGCACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527892.5
ENST00000535724.6
3UTR-3UTR GCA 90 bp CGTAGAACCAGCCAGGCAGGGGAACGTCATCACTGGCTTGGGCTGAGTGTATCTTTCAAGGAAGCAGCCTaGAGTAGGTCACTGTGGAGT +
Preference number: 2 (lower is better)
Translates to: RRTSQAGERHHWLGLSVSFKEAA*SRSLWS
Trigger: ACTCCACAGTGACCTACTGCAGGCTGCTTCCTTGAA...AGATACACTCAGCCCAAGCCAGTGATGACGTTCCCCTGCCTGGCTGGTTCTACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675050.1
3UTR-3UTR CCA 90 bp CACCATGTTGTCTCTCACATCCAGCTGTACTACCTTCTTCCCAGTGAGGACAGCTGGCCAACTCAACATTaGGCTCCAGGCCCACAGCTG +
Preference number: 2 (lower is better)
Translates to: HHVVSHIQLYYLLPSEDSWPTQH*APGPQL
Trigger: CAGCTGTGGGCCTGGAGCCCAATGTTGAGTTGGCCA...GCTGTCCTCACTGGGAAGAAGGTAGTACAGCTGGATGTGAGAGACAACATGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527892.5
ENST00000674555.1
ENST00000674997.1
3UTR-3UTR CCA 90 bp CAGCAGGCAGAAGAGTCAAGAGATGATGGTCCTTCCATGAGTCCGTCTCCAGGTGTGTGCAAAGAGGTCTaGAGGGGTGAGGGAAGTTCG +
Preference number: 2 (lower is better)
Translates to: QQAEESRDDGPSMSPSPGVCKEV*RGEGSS
Trigger: CGAACTTCCCTCACCCCTCCAGACCTCTTTGCACAC...ACCTGGAGACGGACTCATGGAAGGACCATCATCTCTTGACTCTTCTGCCTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
3UTR-3UTR CCA 90 bp GGCCTGTTCTCCCAGTGTTCAGAAGGGATTTGGTTGAAGCTGAAACTGCCCTTAGGGAGTCAAGTGTTGTaGGCCGAGGCCACAGCAGGT +
Preference number: 2 (lower is better)
Translates to: GLFSQCSEGIWLKLKLPLGSQVL*AEATAG
Trigger: ACCTGCTGTGGCCTCGGCCCACAACACTTGACTCCC...TAAGGGCAGTTTCAGCTTCAACCAAATCCCTTCTGAACACTGGGAGAACAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676229.1
3UTR-3UTR TCA 90 bp TCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCAGGCCCACATCGGATACCAGTTCCTaGCTGCTCTGTGGCAGATTT +
Preference number: 2 (lower is better)
Translates to: SISRPPVLANSTLGSRPTSDTSS*LLCGRF
Trigger: AAATCTGCCACAGAGCAGTCAGGAACTGGTATCCGA...TGTGGGCCTGGAGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
3UTR-3UTR TCA 90 bp CTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCAGGCTCGGATACCAGTTCCTaGCTGCTCTGTGGCAGATTT +
Preference number: 2 (lower is better)
Translates to: LSLFPGHQSWPTQHWAPGSDTSS*LLCGRF
Trigger: AAATCTGCCACAGAGCAGTCAGGAACTGGTATCCGA...GCCTGGAGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
3UTR-3UTR TCA 90 bp TCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCAGGCCCACATTCTCGGGGAAGAGTTaGATCACTTCTGTGCCCAAG +
Preference number: 2 (lower is better)
Translates to: SISRPPVLANSTLGSRPTFSGKS*ITSVPK
Trigger: CTTGGGCACAGAAGTGATTCAACTCTTCCCCGAGAA...TGTGGGCCTGGAGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674997.1
3UTR-3UTR TCA 90 bp TCTGTGCCCAAGGCTCGAGAGGACAGTGGGCATGAGGGCCTCGGTGCTCAAGTTAAACCACAGTTCTTTTaGAAGAGGAGGTCGCATGTA +
Preference number: 2 (lower is better)
Translates to: SVPKAREDSGHEGLGAQVKPQFF*KRRSHV
Trigger: TACATGCGACCTCCTCTTTCAAAAGAACTGTGGTTT...AACTTGAGCACCGAGGCCCTCATGCCCACTGTCCTCTCGAGCCTTGGGCACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527892.5
3UTR-3UTR TCA 90 bp CACCATGTTGTCTCTCACATCCAGCTGTACTACCTTCTTCCCAGTGAGGACAGCCTACCTTCTTCCCAGTaGGGACAGCCACACCACCAT +
Preference number: 2 (lower is better)
Translates to: HHVVSHIQLYYLLPSEDSLPSSQ*GQPHHH
Trigger: ATGGTGGTGTGGCTGTCCTCACTGGGAAGAAGGTAG...GCTGTCCTCACTGGGAAGAAGGTAGTACAGCTGGATGTGAGAGACAACATGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527892.5
ENST00000674555.1
ENST00000674997.1
ENST00000675774.1
ENST00000676144.1
3UTR-3UTR TCA 90 bp CAGCAGGCAGAAGAGTCAAGAGATGATGGTCCTTCCATGAGTCCGTCTCCAGGTGGCAGCAGAATCACTTaGATCCGGGAGGTAGAGGTT +
Preference number: 2 (lower is better)
Translates to: QQAEESRDDGPSMSPSPGGSRIT*IREVEV
Trigger: AACCTCTACCTCCCGGATTCAAGTGATTCTGCTGCC...ACCTGGAGACGGACTCATGGAAGGACCATCATCTCTTGACTCTTCTGCCTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676229.1
3UTR-3UTR GCA 90 bp AATCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCAGGGCTGCAGTGGGTTTaGCAATTCCACTGTGGGGCT +
Preference number: 2 (lower is better)
Translates to: NLSLFPGHQSWPTQHWAPGLQWV*QFHCGA
Trigger: AGCCCCACAGTGGAATTGGCAAACCCACTGCAGCCC...TGGAGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
3UTR-3UTR GCA 90 bp AATCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCACCTCCTCTCAGGGGCTaGAGTGGGTTTGCCAATTCC +
Preference number: 2 (lower is better)
Translates to: NLSLFPGHQSWPTQHWAPPPLRG*SGFANS
Trigger: GGAATTGGCAAACCCACTGCAGCCCCTGAGAGGAGG...TGGAGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
3UTR-3UTR CCA 90 bp AATCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCATGGCCAACTCAACATTaGGCTCCAGGCCCACAGCTG +
Preference number: 2 (lower is better)
Translates to: NLSLFPGHQSWPTQHWAPWPTQH*APGPQL
Trigger: CAGCTGTGGGCCTGGAGCCCAATGTTGAGTTGGCCA...TGGAGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
3UTR-3UTR CCA 90 bp GGTGCTGCAATTTGCTTGCTTTCTAATATGCGTGGCTTTCCACCTTCACCCACCTGGCCAACTCAACATTaGGCTCCAGGCCCACAGCTG +
Preference number: 2 (lower is better)
Translates to: GAAICLLSNMRGFPPSPTWPTQH*APGPQL
Trigger: CAGCTGTGGGCCTGGAGCCCAATGTTGAGTTGGCCA...GGTGGGTGAAGGTGGAAAGCCACGCATATTAGAAAGCAAGCAAATTGCAGCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674957.1
3UTR-3UTR CCA 90 bp GATGATGGTCCTTCCATGAGTCCGTCTCCAGGTTTAACTGTGAAGCACCAGGTCCCAGGCCACCAGTCTTaGCCAACTCAACATTGGGCT +
Preference number: 2 (lower is better)
Translates to: DDGPSMSPSPGLTVKHQVPGHQS*PTQHWA
Trigger: AGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGG...GACCTGGTGCTTCACAGTTAAACCTGGAGACGGACTCATGGAAGGACCATCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674957.1
3UTR-3UTR TCA 90 bp CTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCAGGCAGGAATAGTAATTTCTaGGGCCTCGGACTCTGTCTC +
Preference number: 2 (lower is better)
Translates to: LSLFPGHQSWPTQHWAPGRNSNF*GLGLCL
Trigger: GAGACAGAGTCCGAGGCCTCAGAAATTACTATTCCT...GCCTGGAGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
3UTR-3UTR TCA 90 bp CACCATGTTGTCTCTCACATCCAGCTGTACTACCTTCTTCCCAGTGAGGACAGCCTTGGCGCCTTGTCTTaGGGAACTTCCTCTCCTTCT +
Preference number: 2 (lower is better)
Translates to: HHVVSHIQLYYLLPSEDSLGALS*GTSSPS
Trigger: AGAAGGAGAGGAAGTTCCTCAAGACAAGGCGCCAAG...GCTGTCCTCACTGGGAAGAAGGTAGTACAGCTGGATGTGAGAGACAACATGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527892.5
ENST00000674555.1
ENST00000674997.1
ENST00000675774.1
3UTR-3UTR TCA 90 bp AATCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCACTACCTTCTTCCCAGTaGGGACAGCCACACCACCAT +
Preference number: 2 (lower is better)
Translates to: NLSLFPGHQSWPTQHWAPLPSSQ*GQPHHH
Trigger: ATGGTGGTGTGGCTGTCCTCACTGGGAAGAAGGTAG...TGGAGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527892.5
ENST00000674555.1
ENST00000674997.1
3UTR-3UTR TCA 90 bp AGGCCAGTTGGTAGCAACACCAAGTCCTGGCCGACAGTACCGGGCGAGCTTCCAAGCAAATGTTCATTTTaGGAGGATCTCTGGTTTCCA +
Preference number: 2 (lower is better)
Translates to: RPVGSNTKSWPTVPGELPSKCSF*EDLWFP
Trigger: TGGAAACCAGAGATCCTCTCAAAATGAACATTTGCT...TGGAAGCTCGCCCGGTACTGTCGGCCAGGACTTGGTGTTGCTACCAACTGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675050.1
3UTR-3UTR GCA 90 bp CAAAATCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTGGGCTGCAGTGGGTTTaGCAATTCCACTGTGGGGCT +
Preference number: 2 (lower is better)
Translates to: QNLSLFPGHQSWPTQHWAGLQWV*QFHCGA
Trigger: AGCCCCACAGTGGAATTGGCAAACCCACTGCAGCCC...AGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGATTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
3UTR-3UTR GCA 90 bp CTCACATCCAGCTGTACTACCTTCTTCCCAGTGAGGACAGCCACACCACCATTCATACCAGTTCCTGACTaGTCTGTGGCAGATTTGGGG +
Preference number: 2 (lower is better)
Translates to: LTSSCTTFFPVRTATPPFIPVPD*SVADLG
Trigger: CCCCAAATCTGCCACAGAGCAGTCAGGAACTGGTAT...GAATGGTGGTGTGGCTGTCCTCACTGGGAAGAAGGTAGTACAGCTGGATGTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527892.5
ENST00000674555.1
ENST00000674997.1
3UTR-3UTR GCA 90 bp CAGCAGGCAGAAGAGTCAAGAGATGATGGTCCTTCCATGAGTCCGTCTCCAGGTATACCAGTTCCTGACTaGTCTGTGGCAGATTTGGGG +
Preference number: 2 (lower is better)
Translates to: QQAEESRDDGPSMSPSPGIPVPD*SVADLG
Trigger: CCCCAAATCTGCCACAGAGCAGTCAGGAACTGGTAT...ACCTGGAGACGGACTCATGGAAGGACCATCATCTCTTGACTCTTCTGCCTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674957.1
3UTR-3UTR GCA 90 bp TGCCCAAGGCTCGAGAGGACAGTGGGCATGAGGGCCTCGGTGCTCAAGTTCATTTTGAGATCTTCATGCTaGTCACCGTCCTTAATGATC +
Preference number: 2 (lower is better)
Translates to: CPRLERTVGMRASVLKFILRSSC*SPSLMI
Trigger: GATCATTAAGGACGGTGAGCAGCATGAAGATCTCAA...AATGAACTTGAGCACCGAGGCCCTCATGCCCACTGTCCTCTCGAGCCTTGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527892.5
ENST00000535724.6
3UTR-3UTR GCA 90 bp CTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCAGGCCTGACTCCAACGGATTaGACAATAGCATTGGGCATC +
Preference number: 2 (lower is better)
Translates to: LSLFPGHQSWPTQHWAPGLTPTD*TIALGI
Trigger: GATGCCCAATGCTATTGTGCAATCCGTTGGAGTCAG...GCCTGGAGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674997.1
3UTR-3UTR GCA 90 bp GGTGAACTCTGTGCACTTCCACCCATGCAGTCACCTAAGGCTTACATAAGTGCTCTCCAGGCCCACAGCTaGCACTATGTGGTCAGTTTC +
Preference number: 2 (lower is better)
Translates to: GELCALPPMQSPKAYISALQAHS*HYVVSF
Trigger: GAAACTGACCACATAGTGGCAGCTGTGGGCCTGGAG...AGCACTTATGTAAGCCTTAGGTGACTGCATGGGTGGAAGTGCACAGAGTTCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527892.5
ENST00000535724.6
3UTR-3UTR GCA 90 bp CCAAAATCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCCTCCAGGCCCACAGCTaGCACTATGTGGTCAGTTTC +
Preference number: 2 (lower is better)
Translates to: PKSESISRPPVLANSTLGLQAHS*HYVVSF
Trigger: GAAACTGACCACATAGTGGCAGCTGTGGGCCTGGAG...GCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGATTTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674997.1
3UTR-3UTR GCA 90 bp AATCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCACTCCAGGCCCACAGCTaGCACTATGTGGTCAGTTTC +
Preference number: 2 (lower is better)
Translates to: NLSLFPGHQSWPTQHWAPLQAHS*HYVVSF
Trigger: GAAACTGACCACATAGTGGCAGCTGTGGGCCTGGAG...TGGAGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674997.1
3UTR-3UTR GCA 90 bp CCAAAATCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCGCATGCAGCATCTCCTaGCACCCAGATGTTAGAGCG +
Preference number: 2 (lower is better)
Translates to: PKSESISRPPVLANSTLGACSIS*HPDVRA
Trigger: CGCTCTAACATCTGGGTGGCAGGAGATGCTGCATGC...GCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGATTTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
3UTR-3UTR GCA 90 bp GGTTGGGTCAGGGGATTTGGAGGAAGGTTTAAGGAAGTCAGGCTTTGTTCTGGAGCAGAACTTCCCCTCTaGCCAGAAAGCAAGGCACTG +
Preference number: 2 (lower is better)
Translates to: GWVRGFGGRFKEVRLCSGAELPL*PESKAL
Trigger: CAGTGCCTTGCTTTCTGGGCAGAGGGGAAGTTCTGC...TCCAGAACAAAGCCTGACTTCCTTAAACCTTCCTCCAAATCCCCTGACCCAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675050.1
3UTR-3UTR CCA 90 bp CCACCCATGCAGTCACCTAAGGCTTACATAAGTGCTTTGCAACCTCTGAATAGGGAGCCCGGATGGATCTaGCTGCAGCAAAAGCAGCTG +
Preference number: 2 (lower is better)
Translates to: PPMQSPKAYISALQPLNREPGWI*LQQKQL
Trigger: CAGCTGCTTTTGCTGCAGCCAGATCCATCCGGGCTC...CCTATTCAGAGGTTGCAAAGCACTTATGTAAGCCTTAGGTGACTGCATGGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527892.5
3UTR-3UTR CCA 90 bp CAAAATCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTATACAATCAGTACCCTaGCCCCAGGATCCCGAGCCC +
Preference number: 2 (lower is better)
Translates to: QNLSLFPGHQSWPTQHWAIQSVP*PQDPEP
Trigger: GGGCTCGGGATCCTGGGGCCAGGGTACTGATTGTAT...AGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGATTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527892.5
ENST00000674555.1
ENST00000674997.1
3UTR-3UTR CCA 90 bp CAAAATCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTTGGCCAACTCAACATTaGGCTCCAGGCCCACAGCTG +
Preference number: 2 (lower is better)
Translates to: QNLSLFPGHQSWPTQHWAWPTQH*APGPQL
Trigger: CAGCTGTGGGCCTGGAGCCCAATGTTGAGTTGGCCA...AGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGATTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
3UTR-3UTR CCA 90 bp CAGCAGGCAGAAGAGTCAAGAGATGATGGTCCTTCCATGAGTCCGTCTCCAGGTCACAAGGATGAGGCTTaGAAGGCTGGGAAAGTCTTC +
Preference number: 2 (lower is better)
Translates to: QQAEESRDDGPSMSPSPGHKDEA*KAGKVF
Trigger: GAAGACTTTCCCAGCCTTCCAAGCCTCATCCTTGTG...ACCTGGAGACGGACTCATGGAAGGACCATCATCTCTTGACTCTTCTGCCTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
3UTR-3UTR TCA 90 bp GATGTCTGGCATGAGGACAGCAGGCAGAAGAGTCAAGAGATGATGGTCCTTCCATCGGATACCAGTTCCTaGCTGCTCTGTGGCAGATTT +
Preference number: 2 (lower is better)
Translates to: DVWHEDSRQKSQEMMVLPSDTSS*LLCGRF
Trigger: AAATCTGCCACAGAGCAGTCAGGAACTGGTATCCGA...TGGAAGGACCATCATCTCTTGACTCTTCTGCCTGCTGTCCTCATGCCAGACATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674957.1
3UTR-3UTR TCA 90 bp CACCATGTTGTCTCTCACATCCAGCTGTACTACCTTCTTCCCAGTGAGGACAGCTCGGATACCAGTTCCTaGCTGCTCTGTGGCAGATTT +
Preference number: 2 (lower is better)
Translates to: HHVVSHIQLYYLLPSEDSSDTSS*LLCGRF
Trigger: AAATCTGCCACAGAGCAGTCAGGAACTGGTATCCGA...GCTGTCCTCACTGGGAAGAAGGTAGTACAGCTGGATGTGAGAGACAACATGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527892.5
ENST00000674555.1
ENST00000674997.1
3UTR-3UTR TCA 90 bp GCAGGTGTGTGCAAAGAGGTCTGGAGGGGTGAGGGAAGTTCGGAAATGAAAGGAAGGAATAGTAATTTCTaGGGCCTCGGACTCTGTCTC +
Preference number: 2 (lower is better)
Translates to: AGVCKEVWRGEGSSEMKGRNSNF*GLGLCL
Trigger: GAGACAGAGTCCGAGGCCTCAGAAATTACTATTCCT...TCCTTTCATTTCCGAACTTCCCTCACCCCTCCAGACCTCTTTGCACACACCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674957.1
3UTR-3UTR TCA 90 bp CACCATGTTGTCTCTCACATCCAGCTGTACTACCTTCTTCCCAGTGAGGACAGCTTCTCGGGGAAGAGTTaGATCACTTCTGTGCCCAAG +
Preference number: 2 (lower is better)
Translates to: HHVVSHIQLYYLLPSEDSFSGKS*ITSVPK
Trigger: CTTGGGCACAGAAGTGATTCAACTCTTCCCCGAGAA...GCTGTCCTCACTGGGAAGAAGGTAGTACAGCTGGATGTGAGAGACAACATGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527892.5
ENST00000674555.1
ENST00000674997.1
ENST00000676144.1
3UTR-3UTR TCA 90 bp TATGCCATGCTTCAGGAAGAGGGCGCTAGAAAAGACTTAGAGGATTCAGGTTGGCCTCCCTGTCCTCTTTaGCCTAGTCACACCCATACG +
Preference number: 2 (lower is better)
Translates to: YAMLQEEGARKDLEDSGWPPCPL*PSHTHT
Trigger: CGTATGGGTGTGACTAGGTCAAAGAGGACAGGGAGG...CCAACCTGAATCCTCTAAGTCTTTTCTAGCGCCCTCTTCCTGAAGCATGGCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675050.1
3UTR-3UTR TCA 90 bp GGCCTGTTCTCCCAGTGTTCAGAAGGGATTTGGTTGAAGCTGAAACTGCCCTTAAGTTTGAGACCAGCCTaGCCATCATGGAGAAACCCC +
Preference number: 2 (lower is better)
Translates to: GLFSQCSEGIWLKLKLPLSLRPA*PSWRNP
Trigger: GGGGTTTCTCCATGATGGTCAGGCTGGTCTCAAACT...TAAGGGCAGTTTCAGCTTCAACCAAATCCCTTCTGAACACTGGGAGAACAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676229.1
3UTR-3UTR GCA 90 bp ACCAACTGTGGGCAAACTACTGTCCACAAGACCAATAGCTTCATAGCCAACATCGGGCTGCAGTGGGTTTaGCAATTCCACTGTGGGGCT +
Preference number: 2 (lower is better)
Translates to: TNCGQTTVHKTNSFIANIGLQWV*QFHCGA
Trigger: AGCCCCACAGTGGAATTGGCAAACCCACTGCAGCCC...GATGTTGGCTATGAAGCTATTGGTCTTGTGGACAGTAGTTTGCCCACAGTTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
ENST00000675037.1
3UTR-3UTR GCA 90 bp ACCAACTGTGGGCAAACTACTGTCCACAAGACCAATAGCTTCATAGCCAACATCCCTCCTCTCAGGGGCTaGAGTGGGTTTGCCAATTCC +
Preference number: 2 (lower is better)
Translates to: TNCGQTTVHKTNSFIANIPPLRG*SGFANS
Trigger: GGAATTGGCAAACCCACTGCAGCCCCTGAGAGGAGG...GATGTTGGCTATGAAGCTATTGGTCTTGTGGACAGTAGTTTGCCCACAGTTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
ENST00000675037.1
3UTR-3UTR GCA 90 bp TCAAGAGATGATGGTCCTTCCATGAGTCCGTCTCCAGGTTTAACTGTGAAGCACGCATGCAGCATCTCCTaGCACCCAGATGTTAGAGCG +
Preference number: 2 (lower is better)
Translates to: SRDDGPSMSPSPGLTVKHACSIS*HPDVRA
Trigger: CGCTCTAACATCTGGGTGGCAGGAGATGCTGCATGC...GTGCTTCACAGTTAAACCTGGAGACGGACTCATGGAAGGACCATCATCTCTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674957.1
3UTR-3UTR GCA 90 bp GATGATGGTCCTTCCATGAGTCCGTCTCCAGGTTTAACTGTGAAGCACCAGGTCCCTGTGCTTGGTCGGTaGTGCAATTTGCTTGCTTTC +
Preference number: 2 (lower is better)
Translates to: DDGPSMSPSPGLTVKHQVPVLGR*CNLLAF
Trigger: GAAAGCAAGCAAATTGCAGCACCGACCAAGCACAGG...GACCTGGTGCTTCACAGTTAAACCTGGAGACGGACTCATGGAAGGACCATCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
3UTR-3UTR GCA 90 bp CAGCAGGCAGAAGAGTCAAGAGATGATGGTCCTTCCATGAGTCCGTCTCCAGGTCAGATTTGTAGTAAGTaGCCTTTCTGTCCCCTGCAG +
Preference number: 2 (lower is better)
Translates to: QQAEESRDDGPSMSPSPGQICSK*PFCPLQ
Trigger: CTGCAGGGGACAGAAAGGGCACTTACTACAAATCTG...ACCTGGAGACGGACTCATGGAAGGACCATCATCTCTTGACTCTTCTGCCTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
3UTR-3UTR CCA 90 bp GAGGATTCAGGTTGGGTCAGGGGATTTGGAGGAAGGTTTAAGGAAGTCAGGCTTTCTCAGGGGCTGCAGTaGGTTTGCCAATTCCACTGT +
Preference number: 2 (lower is better)
Translates to: EDSGWVRGFGGRFKEVRLSQGLQ*VCQFHC
Trigger: ACAGTGGAATTGGCAAACCCACTGCAGCCCCTGAGA...AAGCCTGACTTCCTTAAACCTTCCTCCAAATCCCCTGACCCAACCTGAATCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675050.1
3UTR-3UTR CCA 90 bp CTCACATCCAGCTGTACTACCTTCTTCCCAGTGAGGACAGCCACACCACCATTCTTCCTGACTGCTCTGTaGCAGATTTGGGGTTGTCTT +
Preference number: 2 (lower is better)
Translates to: LTSSCTTFFPVRTATPPFFLTAL*QIWGCL
Trigger: AAGACAACCCCAAATCTGCCACAGAGCAGTCAGGAA...GAATGGTGGTGTGGCTGTCCTCACTGGGAAGAAGGTAGTACAGCTGGATGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527892.5
ENST00000674555.1
ENST00000674997.1
3UTR-3UTR CCA 90 bp CTCACATCCAGCTGTACTACCTTCTTCCCAGTGAGGACAGCCACACCACCATTCGAAAGGAACATGACTTaGCGCCTTGTCTTGAGGAAC +
Preference number: 2 (lower is better)
Translates to: LTSSCTTFFPVRTATPPFERNMT*RLVLRN
Trigger: GTTCCTCAAGACAAGGCGCCAAGTCATGTTCCTTTC...GAATGGTGGTGTGGCTGTCCTCACTGGGAAGAAGGTAGTACAGCTGGATGTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527892.5
ENST00000674555.1
ENST00000674997.1
ENST00000675774.1
3UTR-3UTR CCA 90 bp CACATCCAGCTGTACTACCTTCTTCCCAGTGAGGACAGCCACACCACCATTCTCGAAAGGAACATGACTTaGCGCCTTGTCTTGAGGAAC +
Preference number: 2 (lower is better)
Translates to: HIQLYYLLPSEDSHTTILERNMT*RLVLRN
Trigger: GTTCCTCAAGACAAGGCGCCAAGTCATGTTCCTTTC...GAGAATGGTGGTGTGGCTGTCCTCACTGGGAAGAAGGTAGTACAGCTGGATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527892.5
ENST00000674555.1
ENST00000674997.1
ENST00000675774.1
3UTR-3UTR CCA 90 bp AAAGAAAATCAAGGTCACTCCTCAATACTCACCCTTTCTGCCAAGAGCACAGGCGAGCCCGGATGGATCTaGCTGCAGCAAAAGCAGCTG +
Preference number: 2 (lower is better)
Translates to: KENQGHSSILTLSAKSTGEPGWI*LQQKQL
Trigger: CAGCTGCTTTTGCTGCAGCCAGATCCATCCGGGCTC...GCCTGTGCTCTTGGCAGAAAGGGTGAGTATTGAGGAGTGACCTTGATTTTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675774.1
3UTR-3UTR CCA 90 bp AAAGAAAATCAAGGTCACTCCTCAATACTCACCCTTTCTGCCAAGAGCACAGGCGATCCCGAGCCCGGATaGATCTGGCTGCAGCAAAAG +
Preference number: 2 (lower is better)
Translates to: KENQGHSSILTLSAKSTGDPEPG*IWLQQK
Trigger: CTTTTGCTGCAGCCAGATCCATCCGGGCTCGGGATC...GCCTGTGCTCTTGGCAGAAAGGGTGAGTATTGAGGAGTGACCTTGATTTTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675774.1
3UTR-3UTR CCA 90 bp ACAGCTTTTTGGTCACCAAGGGATCCCTCACCAGAACTAATCTCAGTGTTTAGCATACAATCAGTACCCTaGCCCCAGGATCCCGAGCCC +
Preference number: 2 (lower is better)
Translates to: TAFWSPRDPSPELISVFSIQSVP*PQDPEP
Trigger: GGGCTCGGGATCCTGGGGCCAGGGTACTGATTGTAT...GCTAAACACTGAGATTAGTTCTGGTGAGGGATCCCTTGGTGACCAAAAAGCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675774.1
3UTR-3UTR CCA 90 bp CAAAATCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCAGGCCACCAGTCTTaGCCAACTCAACATTGGGCT +
Preference number: 2 (lower is better)
Translates to: QNLSLFPGHQSWPTQHWAPGHQS*PTQHWA
Trigger: AGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGG...AGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGATTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
3UTR-3UTR TCA 90 bp GATGATGGTCCTTCCATGAGTCCGTCTCCAGGTTTAACTGTGAAGCACCAGGTCATCACTCCAGAACATTaGCTGATGCCAGTACGGCTT +
Preference number: 2 (lower is better)
Translates to: DDGPSMSPSPGLTVKHQVITPEH*LMPVRL
Trigger: AAGCCGTACTGGCATCAGTCAATGTTCTGGAGTGAT...GACCTGGTGCTTCACAGTTAAACCTGGAGACGGACTCATGGAAGGACCATCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674957.1
3UTR-3UTR TCA 90 bp CCAAAATCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCGGATACCAGTTCCTaGCTGCTCTGTGGCAGATTT +
Preference number: 2 (lower is better)
Translates to: PKSESISRPPVLANSTLGSDTSS*LLCGRF
Trigger: AAATCTGCCACAGAGCAGTCAGGAACTGGTATCCGA...GCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGATTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
3UTR-3UTR TCA 90 bp CCAAAATCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTTCTCGGGGAAGAGTTaGATCACTTCTGTGCCCAAG +
Preference number: 2 (lower is better)
Translates to: PKSESISRPPVLANSTLGFSGKS*ITSVPK
Trigger: CTTGGGCACAGAAGTGATTCAACTCTTCCCCGAGAA...GCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGATTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674997.1
3UTR-3UTR GCA 90 bp ATGTGGTCAGTTTCTACCTTCCTGCCGTCTTTCAGCTTGATAAGTAACTTGCCACCTCCTCTCAGGGGCTaGAGTGGGTTTGCCAATTCC +
Preference number: 2 (lower is better)
Translates to: MWSVSTFLPSFSLISNLPPPLRG*SGFANS
Trigger: GGAATTGGCAAACCCACTGCAGCCCCTGAGAGGAGG...TGGCAAGTTACTTATCAAGCTGAAAGACGGCAGGAAGGTAGAAACTGACCACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674997.1
3UTR-3UTR GCA 90 bp CTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCAGGCTTGAGATCTTCATGCTaGTCACCGTCCTTAATGATC +
Preference number: 2 (lower is better)
Translates to: LSLFPGHQSWPTQHWAPGLRSSC*SPSLMI
Trigger: GATCATTAAGGACGGTGAGCAGCATGAAGATCTCAA...GCCTGGAGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
3UTR-3UTR GCA 90 bp CCAAAATCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCTACTCTTCACCTCTaGTCCAGCCCTATCAATGGC +
Preference number: 2 (lower is better)
Translates to: PKSESISRPPVLANSTLGSTLHL*SSPING
Trigger: GCCATTGATAGGGCTGGAGCAGAGGTGAAGAGTAGA...GCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGATTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527892.5
ENST00000674555.1
ENST00000674997.1
3UTR-3UTR CCA 90 bp CAAAATCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTTCTCAGGGGCTGCAGTaGGTTTGCCAATTCCACTGT +
Preference number: 2 (lower is better)
Translates to: QNLSLFPGHQSWPTQHWASQGLQ*VCQFHC
Trigger: ACAGTGGAATTGGCAAACCCACTGCAGCCCCTGAGA...AGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGATTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
3UTR-3UTR CCA 90 bp CTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCAGGCCAAAAACACCAACTGTaGGCAAACTACTGTCCACAA +
Preference number: 2 (lower is better)
Translates to: LSLFPGHQSWPTQHWAPGQKHQL*ANYCPQ
Trigger: TTGTGGACAGTAGTTTGCCCACAGTTGGTGTTTTTG...GCCTGGAGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
3UTR-3UTR CCA 90 bp TCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCAGGCCCACACAAAAACACCAACTGTaGGCAAACTACTGTCCACAA +
Preference number: 2 (lower is better)
Translates to: SISRPPVLANSTLGSRPTQKHQL*ANYCPQ
Trigger: TTGTGGACAGTAGTTTGCCCACAGTTGGTGTTTTTG...TGTGGGCCTGGAGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
3UTR-3UTR CCA 90 bp AACTGCTGGCCCCAGATTAAGCTTCAGATGGTGAACTCTGTGCACTTCCACCCATTCCTGACTGCTCTGTaGCAGATTTGGGGTTGTCTT +
Preference number: 2 (lower is better)
Translates to: NCWPQIKLQMVNSVHFHPFLTAL*QIWGCL
Trigger: AAGACAACCCCAAATCTGCCACAGAGCAGTCAGGAA...TGGGTGGAAGTGCACAGAGTTCACCATCTGAAGCTTAATCTGGGGCCAGCAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527892.5
ENST00000535724.6
3UTR-3UTR CCA 90 bp GAGGATTCAGGTTGGGTCAGGGGATTTGGAGGAAGGTTTAAGGAAGTCAGGCTTACGTCATCACTGGCTTaGGCTGAGTGTATCTGTGTG +
Preference number: 2 (lower is better)
Translates to: EDSGWVRGFGGRFKEVRLTSSLA*AECICV
Trigger: CACACAGATACACTCAGCCCAAGCCAGTGATGACGT...AAGCCTGACTTCCTTAAACCTTCCTCCAAATCCCCTGACCCAACCTGAATCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675050.1
3UTR-3UTR CCA 90 bp CCAGGTTTAACTGTGAAGCACCAGGTCTCTGAACTCAGATTTGTAGTAAGTGCCGTGTGCAAAGAGGTCTaGAGGGGTGAGGGAAGTTCG +
Preference number: 2 (lower is better)
Translates to: PGLTVKHQVSELRFVVSAVCKEV*RGEGSS
Trigger: CGAACTTCCCTCACCCCTCCAGACCTCTTTGCACAC...GGCACTTACTACAAATCTGAGTTCAGAGACCTGGTGCTTCACAGTTAAACCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
3UTR-3UTR TCA 90 bp GATGTCTGGCATGAGGACAGCAGGCAGAAGAGTCAAGAGATGATGGTCCTTCCAGTTTGGCTACTTCATTaGGATCTTCATGCTGCTCAC +
Preference number: 2 (lower is better)
Translates to: DVWHEDSRQKSQEMMVLPVWLLH*DLHAAH
Trigger: GTGAGCAGCATGAAGATCTCAATGAAGTAGCCAAAC...TGGAAGGACCATCATCTCTTGACTCTTCTGCCTGCTGTCCTCATGCCAGACATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674957.1
3UTR-3UTR TCA 90 bp CAAAATCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTTTCTCGGGGAAGAGTTaGATCACTTCTGTGCCCAAG +
Preference number: 2 (lower is better)
Translates to: QNLSLFPGHQSWPTQHWAFSGKS*ITSVPK
Trigger: CTTGGGCACAGAAGTGATTCAACTCTTCCCCGAGAA...AGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGATTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674997.1
3UTR-3UTR TCA 90 bp CTCACATCCAGCTGTACTACCTTCTTCCCAGTGAGGACAGCCACACCACCATTCAAACCACAGTTCTTTTaGAAGAGGAGGTCGCATGTA +
Preference number: 2 (lower is better)
Translates to: LTSSCTTFFPVRTATPPFKPQFF*KRRSHV
Trigger: TACATGCGACCTCCTCTTTCAAAAGAACTGTGGTTT...GAATGGTGGTGTGGCTGTCCTCACTGGGAAGAAGGTAGTACAGCTGGATGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527892.5
ENST00000674555.1
ENST00000674997.1
ENST00000675774.1
ENST00000676144.1
3UTR-3UTR TCA 90 bp GTGTCTGTGCCCGCCAGGAATTCCCTGATAAGATGGGAAAGAGACCAGAGGCAGTATAAATGGGTCTCTTaGGAAGCTGCTGATTTTCCT +
Preference number: 2 (lower is better)
Translates to: VSVPARNSLIRWERDQRQYKWVS*EAADFP
Trigger: AGGAAAATCAGCAGCTTCTCAAGAGACCCATTTATA...CTGCCTCTGGTCTCTTTCCCATCTTATCAGGGAATTCCTGGCGGGCACAGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675050.1
3UTR-3UTR TCA 90 bp TATGCCATGCTTCAGGAAGAGGGCGCTAGAAAAGACTTAGAGGATTCAGGTTGGATCACTGGCTTGGGCTaGGTGTATCTGTGTGTGGTT +
Preference number: 2 (lower is better)
Translates to: YAMLQEEGARKDLEDSGWITGLG*VYLCVV
Trigger: AACCACACACAGATACACTCAGCCCAAGCCAGTGAT...CCAACCTGAATCCTCTAAGTCTTTTCTAGCGCCCTCTTCCTGAAGCATGGCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675050.1
3UTR-3UTR GCA 90 bp CCACCCATGCAGTCACCTAAGGCTTACATAAGTGCTTTGCAACCTCTGAATAGGATACCAGTTCCTGACTaGTCTGTGGCAGATTTGGGG +
Preference number: 2 (lower is better)
Translates to: PPMQSPKAYISALQPLNRIPVPD*SVADLG
Trigger: CCCCAAATCTGCCACAGAGCAGTCAGGAACTGGTAT...CCTATTCAGAGGTTGCAAAGCACTTATGTAAGCCTTAGGTGACTGCATGGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527892.5
ENST00000535724.6
3UTR-3UTR GCA 90 bp TTTCACCATGTTGTCTCTCACATCCAGCTGTACTACCTTCTTCCCAGTGAGGACATACCAGTTCCTGACTaGTCTGTGGCAGATTTGGGG +
Preference number: 2 (lower is better)
Translates to: FHHVVSHIQLYYLLPSEDIPVPD*SVADLG
Trigger: CCCCAAATCTGCCACAGAGCAGTCAGGAACTGGTAT...GTCCTCACTGGGAAGAAGGTAGTACAGCTGGATGTGAGAGACAACATGGTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527892.5
ENST00000674555.1
ENST00000674997.1
3UTR-3UTR GCA 90 bp CCAAAATCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCCTGACTCCAACGGATTaGACAATAGCATTGGGCATC +
Preference number: 2 (lower is better)
Translates to: PKSESISRPPVLANSTLGLTPTD*TIALGI
Trigger: GATGCCCAATGCTATTGTGCAATCCGTTGGAGTCAG...GCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGATTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674997.1
3UTR-3UTR GCA 90 bp CAGCAGGCAGAAGAGTCAAGAGATGATGGTCCTTCCATGAGTCCGTCTCCAGGTGTGCTGCAATTTGCTTaGTTTCTAATATGCGTGGCT +
Preference number: 2 (lower is better)
Translates to: QQAEESRDDGPSMSPSPGVLQFA*FLICVA
Trigger: AGCCACGCATATTAGAAAGCAAGCAAATTGCAGCAC...ACCTGGAGACGGACTCATGGAAGGACCATCATCTCTTGACTCTTCTGCCTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
3UTR-3UTR GCA 90 bp CAGCAGGCAGAAGAGTCAAGAGATGATGGTCCTTCCATGAGTCCGTCTCCAGGTGTCGGTGCTGCAATTTaGTTGCTTTCTAATATGCGT +
Preference number: 2 (lower is better)
Translates to: QQAEESRDDGPSMSPSPGVGAAI*LLSNMR
Trigger: ACGCATATTAGAAAGCAAGCAAATTGCAGCACCGAC...ACCTGGAGACGGACTCATGGAAGGACCATCATCTCTTGACTCTTCTGCCTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
3UTR-3UTR CCA 90 bp GATAAAACCATGAGCAAGGCCTTAACATCAGGGCTTCTGCTTCCAGGAAGTCATTCTCAGGGGCTGCAGTaGGTTTGCCAATTCCACTGT +
Preference number: 2 (lower is better)
Translates to: DKTMSKALTSGLLLPGSHSQGLQ*VCQFHC
Trigger: ACAGTGGAATTGGCAAACCCACTGCAGCCCCTGAGA...ATGACTTCCTGGAAGCAGAAGCCCTGATGTTAAGGCCTTGCTCATGGTTTTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
3UTR-3UTR CCA 90 bp ACCAACTGTGGGCAAACTACTGTCCACAAGACCAATAGCTTCATAGCCAACATCTCTCAGGGGCTGCAGTaGGTTTGCCAATTCCACTGT +
Preference number: 2 (lower is better)
Translates to: TNCGQTTVHKTNSFIANISQGLQ*VCQFHC
Trigger: ACAGTGGAATTGGCAAACCCACTGCAGCCCCTGAGA...GATGTTGGCTATGAAGCTATTGGTCTTGTGGACAGTAGTTTGCCCACAGTTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
ENST00000675037.1
3UTR-3UTR CCA 90 bp CCAAAATCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTTCCTGACTGCTCTGTaGCAGATTTGGGGTTGTCTT +
Preference number: 2 (lower is better)
Translates to: PKSESISRPPVLANSTLGFLTAL*QIWGCL
Trigger: AAGACAACCCCAAATCTGCCACAGAGCAGTCAGGAA...GCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGATTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
3UTR-3UTR CCA 90 bp AATCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCAGAAAGGAACATGACTTaGCGCCTTGTCTTGAGGAAC +
Preference number: 2 (lower is better)
Translates to: NLSLFPGHQSWPTQHWAPERNMT*RLVLRN
Trigger: GTTCCTCAAGACAAGGCGCCAAGTCATGTTCCTTTC...TGGAGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527892.5
ENST00000674555.1
ENST00000674997.1
3UTR-3UTR CCA 90 bp CCAAAATCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCGAAAGGAACATGACTTaGCGCCTTGTCTTGAGGAAC +
Preference number: 2 (lower is better)
Translates to: PKSESISRPPVLANSTLGERNMT*RLVLRN
Trigger: GTTCCTCAAGACAAGGCGCCAAGTCATGTTCCTTTC...GCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGATTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527892.5
ENST00000674555.1
ENST00000674997.1
3UTR-3UTR CCA 90 bp CCAAAATCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCAGGTATCAGAACTGCTaGCCCCAGATTAAGCTTCAG +
Preference number: 2 (lower is better)
Translates to: PKSESISRPPVLANSTLGRYQNC*PQIKLQ
Trigger: CTGAAGCTTAATCTGGGGCCAGCAGTTCTGATACCT...GCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGATTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527892.5
ENST00000535724.6
3UTR-3UTR CCA 90 bp AATCACTTGAATCCGGGAGGTAGAGGTTGTGATGAGCCTAGGTCGCACCATTGCGAAAAATCCTGTGCTTaGTCGGTGCTGCAATTTGCT +
Preference number: 2 (lower is better)
Translates to: NHLNPGGRGCDEPRSHHCEKSCA*SVLQFA
Trigger: AGCAAATTGCAGCACCGACCAAGCACAGGATTTTTC...GCAATGGTGCGACCTAGGCTCATCACAACCTCTACCTCCCGGATTCAAGTGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676229.1
3UTR-3UTR CCA 90 bp CCAGGTTTAACTGTGAAGCACCAGGTCTCTGAACTCAGATTTGTAGTAAGTGCCGCTTCCAGGAAGTCATaGGCTAGCAGGGAGACACAT +
Preference number: 2 (lower is better)
Translates to: PGLTVKHQVSELRFVVSAASRKS*ASRETH
Trigger: ATGTGTCTCCCTGCTAGCCCATGACTTCCTGGAAGC...GGCACTTACTACAAATCTGAGTTCAGAGACCTGGTGCTTCACAGTTAAACCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
3UTR CAA 90 bp CCTGCCCCAGTGACTGTTGCTCCTACAATTAAGAAGTACACTAGGTaGCTGCCATCTTTCCCAGAAGCACCTGTAGATGCTAGTGATCTA +
Preference number: 2 (lower is better)
Translates to: PAPVTVAPTIKKYTR*LPSFPEAPVDASDL
Trigger: TAGATCACTAGCATCTACAGGTGCTTCTGGGAAAGATGGCAGCAACCTAGTGTACTTCTTAATTGTAGGAGCAACAGTCACTGGGGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529877.1
3UTR-3UTR TCA 90 bp CAAAATCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTATCACTCCAGAACATTaGCTGATGCCAGTACGGCTT +
Preference number: 2 (lower is better)
Translates to: QNLSLFPGHQSWPTQHWAITPEH*LMPVRL
Trigger: AAGCCGTACTGGCATCAGTCAATGTTCTGGAGTGAT...AGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGATTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
3UTR-3UTR TCA 90 bp CAAAATCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTAGGAATAGTAATTTCTaGGGCCTCGGACTCTGTCTC +
Preference number: 2 (lower is better)
Translates to: QNLSLFPGHQSWPTQHWARNSNF*GLGLCL
Trigger: GAGACAGAGTCCGAGGCCTCAGAAATTACTATTCCT...AGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGATTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
3UTR-3UTR TCA 90 bp ATGTGGTCAGTTTCTACCTTCCTGCCGTCTTTCAGCTTGATAAGTAACTTGCCACTTGGCGCCTTGTCTTaGGGAACTTCCTCTCCTTCT +
Preference number: 2 (lower is better)
Translates to: MWSVSTFLPSFSLISNLPLGALS*GTSSPS
Trigger: AGAAGGAGAGGAAGTTCCTCAAGACAAGGCGCCAAG...TGGCAAGTTACTTATCAAGCTGAAAGACGGCAGGAAGGTAGAAACTGACCACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527892.5
ENST00000674555.1
ENST00000674997.1
3UTR-3UTR TCA 90 bp GAGGATTCAGGTTGGGTCAGGGGATTTGGAGGAAGGTTTAAGGAAGTCAGGCTTCTCTTGAGAAGCTGCTaGTTTTCCTTCAAGGAAGCA +
Preference number: 2 (lower is better)
Translates to: EDSGWVRGFGGRFKEVRLLLRSC*FSFKEA
Trigger: TGCTTCCTTGAAGGAAAATCAGCAGCTTCTCAAGAG...AAGCCTGACTTCCTTAAACCTTCCTCCAAATCCCCTGACCCAACCTGAATCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675050.1
3UTR-3UTR TCA 90 bp CACCATGTTGTCTCTCACATCCAGCTGTACTACCTTCTTCCCAGTGAGGACAGCACAGAACAGACTGGATaGATCTTCTTGAAGTCTCAG +
Preference number: 2 (lower is better)
Translates to: HHVVSHIQLYYLLPSEDSTEQTG*IFLKSQ
Trigger: CTGAGACTTCAAGAAGATTCATCCAGTCTGTTCTGT...GCTGTCCTCACTGGGAAGAAGGTAGTACAGCTGGATGTGAGAGACAACATGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675774.1
3UTR-3UTR GCA 90 bp ACAGCTTTTTGGTCACCAAGGGATCCCTCACCAGAACTAATCTCAGTGTTTAGCCAGCAAAAGCAGCTGTaGCTCCACCAATTAGCAGGA +
Preference number: 2 (lower is better)
Translates to: TAFWSPRDPSPELISVFSQQKQL*LHQLAG
Trigger: TCCTGCTAATTGGTGGAGGCACAGCTGCTTTTGCTG...GCTAAACACTGAGATTAGTTCTGGTGAGGGATCCCTTGGTGACCAAAAAGCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675774.1
3UTR-3UTR GCA 90 bp AATCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCAAACAGGTATCAGAACTaGTGGCCCCAGATTAAGCTT +
Preference number: 2 (lower is better)
Translates to: NLSLFPGHQSWPTQHWAPNRYQN*WPQIKL
Trigger: AAGCTTAATCTGGGGCCAGCAGTTCTGATACCTGTT...TGGAGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527892.5
ENST00000535724.6
3UTR-3UTR GCA 90 bp CAAAATCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCTGACTCCAACGGATTaGACAATAGCATTGGGCATC +
Preference number: 2 (lower is better)
Translates to: QNLSLFPGHQSWPTQHWALTPTD*TIALGI
Trigger: GATGCCCAATGCTATTGTGCAATCCGTTGGAGTCAG...AGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGATTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674997.1
3UTR-3UTR GCA 90 bp AAAGAAAATCAAGGTCACTCCTCAATACTCACCCTTTCTGCCAAGAGCACAGGCTCTACTCTTCACCTCTaGTCCAGCCCTATCAATGGC +
Preference number: 2 (lower is better)
Translates to: KENQGHSSILTLSAKSTGSTLHL*SSPING
Trigger: GCCATTGATAGGGCTGGAGCAGAGGTGAAGAGTAGA...GCCTGTGCTCTTGGCAGAAAGGGTGAGTATTGAGGAGTGACCTTGATTTTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675774.1
3UTR-3UTR GCA 90 bp GGCCTGTTCTCCCAGTGTTCAGAAGGGATTTGGTTGAAGCTGAAACTGCCCTTAGCTTGCTTTCTAATATaGGTGGCTTTCCACCTTCAC +
Preference number: 2 (lower is better)
Translates to: GLFSQCSEGIWLKLKLPLACFLI*VAFHLH
Trigger: GTGAAGGTGGAAAGCCACGCATATTAGAAAGCAAGC...TAAGGGCAGTTTCAGCTTCAACCAAATCCCTTCTGAACACTGGGAGAACAGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676229.1
3UTR-3UTR GCA 90 bp CCGTCTCCAGGTTTAACTGTGAAGCACCAGGTCTCTGAACTCAGATTTGTAGTACCTGTGCTTGGTCGGTaGTGCAATTTGCTTGCTTTC +
Preference number: 2 (lower is better)
Translates to: PSPGLTVKHQVSELRFVVPVLGR*CNLLAF
Trigger: GAAAGCAAGCAAATTGCAGCACCGACCAAGCACAGG...TACTACAAATCTGAGTTCAGAGACCTGGTGCTTCACAGTTAAACCTGGAGACGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
3UTR-3UTR CCA 90 bp CAAAATCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTTTCCTGACTGCTCTGTaGCAGATTTGGGGTTGTCTT +
Preference number: 2 (lower is better)
Translates to: QNLSLFPGHQSWPTQHWAFLTAL*QIWGCL
Trigger: AAGACAACCCCAAATCTGCCACAGAGCAGTCAGGAA...AGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGATTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
3UTR-3UTR CCA 90 bp AATCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCATTGCCAATTCCACTGTaGGGCTTCAGTCTTCATGAA +
Preference number: 2 (lower is better)
Translates to: NLSLFPGHQSWPTQHWAPLPIPL*GFSLHE
Trigger: TTCATGAAGACTGAAGCCCCACAGTGGAATTGGCAA...TGGAGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
3UTR-3UTR CCA 90 bp TGTGTTCACATGATTATGGAGCGGTCTTGTTTTTGTCTCAATCCACCATGGTCAGTGCCTGGCTTTAGGTaGAGTCAGGGAAGGACGTAC +
Preference number: 2 (lower is better)
Translates to: CVHMIMERSCFCLNPPWSVPGFR*SQGRTY
Trigger: GTACGTCCTTCCCTGACTCCACCTAAAGCCAGGCAC...TGACCATGGTGGATTGAGACAAAAACAAGACCGCTCCATAATCATGTGAACACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675050.1
3UTR-3UTR TCA 90 bp ACCAACTGTGGGCAAACTACTGTCCACAAGACCAATAGCTTCATAGCCAACATCATCACTCCAGAACATTaGCTGATGCCAGTACGGCTT +
Preference number: 2 (lower is better)
Translates to: TNCGQTTVHKTNSFIANIITPEH*LMPVRL
Trigger: AAGCCGTACTGGCATCAGTCAATGTTCTGGAGTGAT...GATGTTGGCTATGAAGCTATTGGTCTTGTGGACAGTAGTTTGCCCACAGTTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
3UTR-3UTR TCA 90 bp CAAAATCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTGTTTGGCTACTTCATTaGGATCTTCATGCTGCTCAC +
Preference number: 2 (lower is better)
Translates to: QNLSLFPGHQSWPTQHWAVWLLH*DLHAAH
Trigger: GTGAGCAGCATGAAGATCTCAATGAAGTAGCCAAAC...AGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGATTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
3UTR-3UTR TCA 90 bp ACCAACTGTGGGCAAACTACTGTCCACAAGACCAATAGCTTCATAGCCAACATCTTAAGCTTCAGATGGTaGACTCTGTGCACTTCCACC +
Preference number: 2 (lower is better)
Translates to: TNCGQTTVHKTNSFIANILSFRW*TLCTST
Trigger: GGTGGAAGTGCACAGAGTTCACCATCTGAAGCTTAA...GATGTTGGCTATGAAGCTATTGGTCTTGTGGACAGTAGTTTGCCCACAGTTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527892.5
ENST00000535724.6
3UTR-3UTR GCA 90 bp ATGTGGTCAGTTTCTACCTTCCTGCCGTCTTTCAGCTTGATAAGTAACTTGCCAGTGCACTTCCACCCATaGAGTCACCTAAGGCTTACA +
Preference number: 2 (lower is better)
Translates to: MWSVSTFLPSFSLISNLPVHFHP*SHLRLT
Trigger: TGTAAGCCTTAGGTGACTGCATGGGTGGAAGTGCAC...TGGCAAGTTACTTATCAAGCTGAAAGACGGCAGGAAGGTAGAAACTGACCACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527892.5
ENST00000535724.6
3UTR-3UTR GCA 90 bp AATCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCAGTCGGTGCTGCAATTTaGTTGCTTTCTAATATGCGT +
Preference number: 2 (lower is better)
Translates to: NLSLFPGHQSWPTQHWAPVGAAI*LLSNMR
Trigger: ACGCATATTAGAAAGCAAGCAAATTGCAGCACCGAC...TGGAGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674957.1
3UTR-3UTR CCA 90 bp CCAAAATCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCCAAAAACACCAACTGTaGGCAAACTACTGTCCACAA +
Preference number: 2 (lower is better)
Translates to: PKSESISRPPVLANSTLGQKHQL*ANYCPQ
Trigger: TTGTGGACAGTAGTTTGCCCACAGTTGGTGTTTTTG...GCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGATTTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
3UTR-3UTR TCA 90 bp ATTTGTAACGCAAATACAACAGGTATCAGAACTGCTGGCCCCAGATTAAGCTTCGTGCTTTGCAACCTCTaGATAGGAAGCATCCTCCTG +
Preference number: 2 (lower is better)
Translates to: ICNANTTGIRTAGPRLSFVLCNL*IGSILL
Trigger: CAGGAGGATGCTTCCTATTCAGAGGTTGCAAAGCAC...GAAGCTTAATCTGGGGCCAGCAGTTCTGATACCTGTTGTATTTGCGTTACAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527892.5
ENST00000535724.6
3UTR-3UTR TCA 90 bp TTTCACCATGTTGTCTCTCACATCCAGCTGTACTACCTTCTTCCCAGTGAGGACAAACCACAGTTCTTTTaGAAGAGGAGGTCGCATGTA +
Preference number: 2 (lower is better)
Translates to: FHHVVSHIQLYYLLPSEDKPQFF*KRRSHV
Trigger: TACATGCGACCTCCTCTTTCAAAAGAACTGTGGTTT...GTCCTCACTGGGAAGAAGGTAGTACAGCTGGATGTGAGAGACAACATGGTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527892.5
ENST00000674555.1
ENST00000674997.1
ENST00000675774.1
ENST00000676144.1
3UTR-3UTR GCA 90 bp GGACAGGAGTTGTTCCAGGTAAACAAAGTCTATTCCATACATTTATTTGTTCACCCTCCTCTCAGGGGCTaGAGTGGGTTTGCCAATTCC +
Preference number: 2 (lower is better)
Translates to: GQELFQVNKVYSIHLFVHPPLRG*SGFANS
Trigger: GGAATTGGCAAACCCACTGCAGCCCCTGAGAGGAGG...GTGAACAAATAAATGTATGGAATAGACTTTGTTTACCTGGAACAACTCCTGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
3UTR-3UTR TCA 90 bp ATTTGTAACGCAAATACAACAGGTATCAGAACTGCTGGCCCCAGATTAAGCTTCAGGAATAGTAATTTCTaGGGCCTCGGACTCTGTCTC +
Preference number: 2 (lower is better)
Translates to: ICNANTTGIRTAGPRLSFRNSNF*GLGLCL
Trigger: GAGACAGAGTCCGAGGCCTCAGAAATTACTATTCCT...GAAGCTTAATCTGGGGCCAGCAGTTCTGATACCTGTTGTATTTGCGTTACAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527892.5
ENST00000535724.6
3UTR-3UTR TCA 90 bp ACAGCTTTTTGGTCACCAAGGGATCCCTCACCAGAACTAATCTCAGTGTTTAGCAAACCACAGTTCTTTTaGAAGAGGAGGTCGCATGTA +
Preference number: 2 (lower is better)
Translates to: TAFWSPRDPSPELISVFSKPQFF*KRRSHV
Trigger: TACATGCGACCTCCTCTTTCAAAAGAACTGTGGTTT...GCTAAACACTGAGATTAGTTCTGGTGAGGGATCCCTTGGTGACCAAAAAGCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675774.1
3UTR-3UTR TCA 90 bp CCACCCATGCAGTCACCTAAGGCTTACATAAGTGCTTTGCAACCTCTGAATAGGCCTGAAAAGATGCCCTaGTTTCATATATCCTTTCTG +
Preference number: 2 (lower is better)
Translates to: PPMQSPKAYISALQPLNRPEKMP*FHISFL
Trigger: CAGAAAGGATATATGAAATCAGGGCATCTTTTCAGG...CCTATTCAGAGGTTGCAAAGCACTTATGTAAGCCTTAGGTGACTGCATGGGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527892.5
3UTR-3UTR GCA 90 bp CATAGTCTTGTAGGCATAATAAACTCCTGCCCCAGTGACTGTTGCTCCTACAATAGAAGTACACTAGGTTaGTGCCATCTTTCCCAGAAG +
Preference number: 2 (lower is better)
Translates to: HSLVGIINSCPSDCCSYNRSTLG*CHLSQK
Trigger: CTTCTGGGAAAGATGGCAGCAACCTAGTGTACTTCT...ATTGTAGGAGCAACAGTCACTGGGGCAGGAGTTTATTATGCCTACAAGACTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529877.1
3UTR-3UTR GCA 90 bp AATCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCAATCCTCCTGAAAAGATaGCCTGATTTCATATATCCT +
Preference number: 2 (lower is better)
Translates to: NLSLFPGHQSWPTQHWAPILLKR*PDFIYP
Trigger: AGGATATATGAAATCAGGGCATCTTTTCAGGAGGAT...TGGAGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527892.5
3UTR-3UTR CCA 90 bp CCCATCTCTGTAAGCAGCAATTACTGCTGTATAATAATTTCGATGTCACAGGATGCTTCCAGGAAGTCATaGGCTAGCAGGGAGACACAT +
Preference number: 2 (lower is better)
Translates to: PISVSSNYCCIIISMSQDASRKS*ASRETH
Trigger: ATGTGTCTCCCTGCTAGCCCATGACTTCCTGGAAGC...ATCCTGTGACATCGAAATTATTATACAGCAGTAATTGCTGCTTACAGAGATGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676229.1
3UTR-3UTR GCA 90 bp CCCATCTCTGTAAGCAGCAATTACTGCTGTATAATAATTTCGATGTCACAGGATTCGGTATACCTGTACTaGAAATTCTTACGGTGGAGA +
Preference number: 2 (lower is better)
Translates to: PISVSSNYCCIIISMSQDSVYLY*KFLRWR
Trigger: TCTCCACCGTAAGAATTTGCAGTACAGGTATACCGA...ATCCTGTGACATCGAAATTATTATACAGCAGTAATTGCTGCTTACAGAGATGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676229.1
3UTR-3UTR GCA 90 bp GGACAGGAGTTGTTCCAGGTAAACAAAGTCTATTCCATACATTTATTTGTTCACGTGCTGCAATTTGCTTaGTTTCTAATATGCGTGGCT +
Preference number: 2 (lower is better)
Translates to: GQELFQVNKVYSIHLFVHVLQFA*FLICVA
Trigger: AGCCACGCATATTAGAAAGCAAGCAAATTGCAGCAC...GTGAACAAATAAATGTATGGAATAGACTTTGTTTACCTGGAACAACTCCTGTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
3UTR-3UTR CAA 90 bp GTCCTCCCCCTGGACGGGAGCCTGTGGAACTGCCGGGGTGCTGGGAGGAATAGTGGGGCTGCAGTGGGTTaGCCAATTCCACTGTGGGGC +
Preference number: 3 (lower is better)
Translates to: VLPLDGSLWNCRGAGRNSGAAVG*PIPLWG
Trigger: GCCCCACAGTGGAATTGGCAAACCCACTGCAGCCCC...ACTATTCCTCCCAGCACCCCGGCAGTTCCACAGGCTCCCGTCCAGGGGGAGGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
ENST00000675037.1
3UTR-3UTR CAA 90 bp TCTGTGCCCAAGGCTCGAGAGGACAGTGGGCATGAGGGCCTCGGTGCTCAAGTTGGGGCTGCAGTGGGTTaGCCAATTCCACTGTGGGGC +
Preference number: 3 (lower is better)
Translates to: SVPKAREDSGHEGLGAQVGAAVG*PIPLWG
Trigger: GCCCCACAGTGGAATTGGCAAACCCACTGCAGCCCC...AACTTGAGCACCGAGGCCCTCATGCCCACTGTCCTCTCGAGCCTTGGGCACAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527892.5
ENST00000535724.6
3UTR CCA 72 bp GTGAGTGCCAGGCCAGTTGGTAGCAACACCAAGTCCTaGCCGACAGTACCGGGCGAGCTTCCAGAGACGCCA +
Preference number: 3 (lower is better)
Translates to: VSARPVGSNTKS*PTVPGELPETP
Trigger: TGGCGTCTCTGGAAGCTCGCCCGGTACTGTCGGCCAGGACTTGGTGTTGCTACCAACTGGCCTGGCACTCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675050.1
3UTR-3UTR CAA 90 bp TCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCAGGCCCACAGGGGCTGCAGTGGGTTaGCCAATTCCACTGTGGGGC +
Preference number: 3 (lower is better)
Translates to: SISRPPVLANSTLGSRPTGAAVG*PIPLWG
Trigger: GCCCCACAGTGGAATTGGCAAACCCACTGCAGCCCC...TGTGGGCCTGGAGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
3UTR-3UTR CAA 90 bp GTCCTCCCCCTGGACGGGAGCCTGTGGAACTGCCGGGGTGCTGGGAGGAATAGTGTGGCAGATTTGGGGTaGTCTTGTGCAGTTGCTTTT +
Preference number: 3 (lower is better)
Translates to: VLPLDGSLWNCRGAGRNSVADLG*SCAVAF
Trigger: AAAAGCAACTGCACAAGACAACCCCAAATCTGCCAC...ACTATTCCTCCCAGCACCCCGGCAGTTCCACAGGCTCCCGTCCAGGGGGAGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
ENST00000675037.1
3UTR-3UTR CAA 90 bp TGCCCAAGGCTCGAGAGGACAGTGGGCATGAGGGCCTCGGTGCTCAAGTTCATTTTGGCCAACTCAACATaGGGCTCCAGGCCCACAGCT +
Preference number: 3 (lower is better)
Translates to: CPRLERTVGMRASVLKFILANST*GSRPTA
Trigger: AGCTGTGGGCCTGGAGCCCAATGTTGAGTTGGCCAA...AATGAACTTGAGCACCGAGGCCCTCATGCCCACTGTCCTCTCGAGCCTTGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527892.5
ENST00000535724.6
3UTR-3UTR CAA 90 bp TCTGTGCCCAAGGCTCGAGAGGACAGTGGGCATGAGGGCCTCGGTGCTCAAGTTTTTTCCATGGTCCAGTaGCTGAGGTATTCGGGGAGG +
Preference number: 3 (lower is better)
Translates to: SVPKAREDSGHEGLGAQVFSMVQ*LRYSGR
Trigger: CCTCCCCGAATACCTCAGCAACTGGACCATGGAAAA...AACTTGAGCACCGAGGCCCTCATGCCCACTGTCCTCTCGAGCCTTGGGCACAGA
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000527892.5
ENST00000535724.6
3UTR-3UTR CAA 90 bp CTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCAGGCTCCAGGCCACCAGTCTaGGCCAACTCAACATTGGGC +
Preference number: 3 (lower is better)
Translates to: LSLFPGHQSWPTQHWAPGSRPPV*ANSTLG
Trigger: GCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGA...GCCTGGAGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
3UTR-3UTR CAA 90 bp CCAAAATCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCGGGGCTGCAGTGGGTTaGCCAATTCCACTGTGGGGC +
Preference number: 3 (lower is better)
Translates to: PKSESISRPPVLANSTLGGAAVG*PIPLWG
Trigger: GCCCCACAGTGGAATTGGCAAACCCACTGCAGCCCC...GCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGATTTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
3UTR-3UTR CAA 90 bp AATCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCAGGGGCTGCAGTGGGTTaGCCAATTCCACTGTGGGGC +
Preference number: 3 (lower is better)
Translates to: NLSLFPGHQSWPTQHWAPGAAVG*PIPLWG
Trigger: GCCCCACAGTGGAATTGGCAAACCCACTGCAGCCCC...TGGAGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
3UTR-3UTR CAA 90 bp TGCCCAAGGCTCGAGAGGACAGTGGGCATGAGGGCCTCGGTGCTCAAGTTCATTGATTGCACAATAGCATaGGGCATCACCTTAACCCCC +
Preference number: 3 (lower is better)
Translates to: CPRLERTVGMRASVLKFIDCTIA*GITLTP
Trigger: GGGGGTTAAGGTGATGCCCAATGCTATTGTGCAATC...AATGAACTTGAGCACCGAGGCCCTCATGCCCACTGTCCTCTCGAGCCTTGGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527892.5
ENST00000535724.6
3UTR TCA 72 bp CACTTCTGTGCCCAAGGCTCGAGAGGACAGTGGGCATaGGGGCCTCGGTGCTCAAGTTCATTTGTAACGCAA +
Preference number: 3 (lower is better)
Translates to: HFCAQGSRGQWA*GPRCSSSFVTQ
Trigger: TTGCGTTACAAATGAACTTGAGCACCGAGGCCCTCATGCCCACTGTCCTCTCGAGCCTTGGGCACAGAAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527892.5
ENST00000535724.6
3UTR-3UTR CAA 90 bp CTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCAGGCACTTGGCGCCTTGTCTaGAGGAACTTCCTCTCCTTC +
Preference number: 3 (lower is better)
Translates to: LSLFPGHQSWPTQHWAPGTWRLV*RNFLSF
Trigger: GAAGGAGAGGAAGTTCCTCAAGACAAGGCGCCAAGT...GCCTGGAGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527892.5
ENST00000674555.1
ENST00000674997.1
3UTR-3UTR CAA 90 bp CTCCCCCTGGACGGGAGCCTGTGGAACTGCCGGGGTGCTGGGAGGAATAGTAATGCTTACATAAGTGCTTaGCAACCTCTGAATAGGAAG +
Preference number: 3 (lower is better)
Translates to: LPLDGSLWNCRGAGRNSNAYISA*QPLNRK
Trigger: CTTCCTATTCAGAGGTTGCAAAGCACTTATGTAAGC...ATTACTATTCCTCCCAGCACCCCGGCAGTTCCACAGGCTCCCGTCCAGGGGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527892.5
ENST00000535724.6
3UTR-3UTR CAA 90 bp TCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCAGGCCCACATTTTCCATGGTCCAGTaGCTGAGGTATTCGGGGAGG +
Preference number: 3 (lower is better)
Translates to: SISRPPVLANSTLGSRPTFSMVQ*LRYSGR
Trigger: CCTCCCCGAATACCTCAGCAACTGGACCATGGAAAA...TGTGGGCCTGGAGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674997.1
3UTR-3UTR CAA 90 bp CACCATGTTGTCTCTCACATCCAGCTGTACTACCTTCTTCCCAGTGAGGACAGCTTGGCCAACTCAACATaGGGCTCCAGGCCCACAGCT +
Preference number: 3 (lower is better)
Translates to: HHVVSHIQLYYLLPSEDSLANST*GSRPTA
Trigger: AGCTGTGGGCCTGGAGCCCAATGTTGAGTTGGCCAA...GCTGTCCTCACTGGGAAGAAGGTAGTACAGCTGGATGTGAGAGACAACATGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527892.5
ENST00000674555.1
ENST00000674997.1
3UTR CCA 72 bp ACAATCTCTAGGGCAGCAAGGGTGCCTGGCTTTAGGTaGAGTCAGGGAAGGACGTACAGAAGGGATATGGCA +
Preference number: 3 (lower is better)
Translates to: TISRAARVPGFR*SQGRTYRRDMA
Trigger: TGCCATATCCCTTCTGTACGTCCTTCCCTGACTCCACCTAAAGCCAGGCACCCTTGCTGCCCTAGAGATTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675050.1
3UTR CCA 72 bp CGCGTGTCTGTGCCCGCCAGGAATTCCCTGATAAGATaGGAAAGAGACCAGAGGCAGTCTTACTTCACCTCT +
Preference number: 3 (lower is better)
Translates to: RVSVPARNSLIR*ERDQRQSYFTS
Trigger: AGAGGTGAAGTAAGACTGCCTCTGGTCTCTTTCCCATCTTATCAGGGAATTCCTGGCGGGCACAGACACGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675050.1
3UTR-3UTR CAA 90 bp GGTGAACTCTGTGCACTTCCACCCATGCAGTCACCTAAGGCTTACATAAGTGCTTTGGCCAACTCAACATaGGGCTCCAGGCCCACAGCT +
Preference number: 3 (lower is better)
Translates to: GELCALPPMQSPKAYISALANST*GSRPTA
Trigger: AGCTGTGGGCCTGGAGCCCAATGTTGAGTTGGCCAA...AGCACTTATGTAAGCCTTAGGTGACTGCATGGGTGGAAGTGCACAGAGTTCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527892.5
ENST00000535724.6
3UTR-3UTR CAA 90 bp AATCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCATCCAGGCCACCAGTCTaGGCCAACTCAACATTGGGC +
Preference number: 3 (lower is better)
Translates to: NLSLFPGHQSWPTQHWAPSRPPV*ANSTLG
Trigger: GCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGA...TGGAGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
3UTR-3UTR CAA 90 bp CCGTCTCCAGGTTTAACTGTGAAGCACCAGGTCTCTGAACTCAGATTTGTAGTAGAGGGGAGTCAAGTGTaGTGGGCCGAGGCCACAGCA +
Preference number: 3 (lower is better)
Translates to: PSPGLTVKHQVSELRFVVEGSQV*WAEATA
Trigger: TGCTGTGGCCTCGGCCCACAACACTTGACTCCCCTC...TACTACAAATCTGAGTTCAGAGACCTGGTGCTTCACAGTTAAACCTGGAGACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
3UTR CCA 72 bp TTTTCCTTCAAGGAAGCAGCCTGCAGTAGGTCACTGTaGAGTCCCACCCCCAGCCCTTTCTGTTTAAAGCCT +
Preference number: 3 (lower is better)
Translates to: FSFKEAACSRSL*SPTPSPFCLKP
Trigger: AGGCTTTAAACAGAAAGGGCTGGGGGTGGGACTCCACAGTGACCTACTGCAGGCTGCTTCCTTGAAGGAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675050.1
3UTR CCA 72 bp ATACGTAGAACCAGCCAGGCAGGGGAACGTCATCACTaGCTTGGGCTGAGTGTATCTGTGTGTGGTTTTGTG +
Preference number: 3 (lower is better)
Translates to: IRRTSQAGERHH*LGLSVSVCGFV
Trigger: CACAAAACCACACACAGATACACTCAGCCCAAGCCAGTGATGACGTTCCCCTGCCTGGCTGGTTCTACGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675050.1
3UTR-3UTR CAA 90 bp TCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCAGGCCCACAGTGGCAGATTTGGGGTaGTCTTGTGCAGTTGCTTTT +
Preference number: 3 (lower is better)
Translates to: SISRPPVLANSTLGSRPTVADLG*SCAVAF
Trigger: AAAAGCAACTGCACAAGACAACCCCAAATCTGCCAC...TGTGGGCCTGGAGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
3UTR-3UTR CAA 90 bp CTCACATCCAGCTGTACTACCTTCTTCCCAGTGAGGACAGCCACACCACCATTCGGAAAGGAACATGACTaGGCGCCTTGTCTTGAGGAA +
Preference number: 3 (lower is better)
Translates to: LTSSCTTFFPVRTATPPFGKEHD*APCLEE
Trigger: TTCCTCAAGACAAGGCGCCAAGTCATGTTCCTTTCC...GAATGGTGGTGTGGCTGTCCTCACTGGGAAGAAGGTAGTACAGCTGGATGTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527892.5
ENST00000674555.1
ENST00000674997.1
ENST00000675774.1
3UTR-3UTR CAA 90 bp CACCATGTTGTCTCTCACATCCAGCTGTACTACCTTCTTCCCAGTGAGGACAGCTTTTCCATGGTCCAGTaGCTGAGGTATTCGGGGAGG +
Preference number: 3 (lower is better)
Translates to: HHVVSHIQLYYLLPSEDSFSMVQ*LRYSGR
Trigger: CCTCCCCGAATACCTCAGCAACTGGACCATGGAAAA...GCTGTCCTCACTGGGAAGAAGGTAGTACAGCTGGATGTGAGAGACAACATGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000527892.5
ENST00000674555.1
ENST00000674997.1
ENST00000676144.1
3UTR-3UTR CAA 90 bp TCAAGAGATGATGGTCCTTCCATGAGTCCGTCTCCAGGTTTAACTGTGAAGCACTCCAGGCCACCAGTCTaGGCCAACTCAACATTGGGC +
Preference number: 3 (lower is better)
Translates to: SRDDGPSMSPSPGLTVKHSRPPV*ANSTLG
Trigger: GCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGA...GTGCTTCACAGTTAAACCTGGAGACGGACTCATGGAAGGACCATCATCTCTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674957.1
3UTR-3UTR CAA 90 bp CACATCCAGCTGTACTACCTTCTTCCCAGTGAGGACAGCCACACCACCATTCTCGTCTCAGATGATTCTTaGCCACAGATAACGCGGCCT +
Preference number: 3 (lower is better)
Translates to: HIQLYYLLPSEDSHTTILVSDDS*PQITRP
Trigger: AGGCCGCGTTATCTGTGGCAAAGAATCATCTGAGAC...GAGAATGGTGGTGTGGCTGTCCTCACTGGGAAGAAGGTAGTACAGCTGGATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675774.1
3UTR-3UTR CAA 90 bp AATCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCATTTTCCATGGTCCAGTaGCTGAGGTATTCGGGGAGG +
Preference number: 3 (lower is better)
Translates to: NLSLFPGHQSWPTQHWAPFSMVQ*LRYSGR
Trigger: CCTCCCCGAATACCTCAGCAACTGGACCATGGAAAA...TGGAGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674997.1
3UTR-3UTR CAA 90 bp CACCATGTTGTCTCTCACATCCAGCTGTACTACCTTCTTCCCAGTGAGGACAGCGATTGCACAATAGCATaGGGCATCACCTTAACCCCC +
Preference number: 3 (lower is better)
Translates to: HHVVSHIQLYYLLPSEDSDCTIA*GITLTP
Trigger: GGGGGTTAAGGTGATGCCCAATGCTATTGTGCAATC...GCTGTCCTCACTGGGAAGAAGGTAGTACAGCTGGATGTGAGAGACAACATGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527892.5
ENST00000674555.1
ENST00000674997.1
ENST00000676144.1
3UTR-3UTR CAA 90 bp CAGCAGGCAGAAGAGTCAAGAGATGATGGTCCTTCCATGAGTCCGTCTCCAGGTAGAAAAATCCTGTGCTaGGTCGGTGCTGCAATTTGC +
Preference number: 3 (lower is better)
Translates to: QQAEESRDDGPSMSPSPGRKILC*VGAAIC
Trigger: GCAAATTGCAGCACCGACCAAGCACAGGATTTTTCT...ACCTGGAGACGGACTCATGGAAGGACCATCATCTCTTGACTCTTCTGCCTGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
3UTR TCA 72 bp TCTGGCATGAGGACAGCAGGCAGAAGAGTCAAGAGATaGTGGTCCTTCCATGAGTCCGTCTCCAGGTTTAAC +
Preference number: 3 (lower is better)
Translates to: SGMRTAGRRVKR*WSFHESVSRFN
Trigger: GTTAAACCTGGAGACGGACTCATGGAAGGACCATCATCTCTTGACTCTTCTGCCTGCTGTCCTCATGCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
3UTR-3UTR CAA 90 bp CACCATGTTGTCTCTCACATCCAGCTGTACTACCTTCTTCCCAGTGAGGACAGCGTGGCAGATTTGGGGTaGTCTTGTGCAGTTGCTTTT +
Preference number: 3 (lower is better)
Translates to: HHVVSHIQLYYLLPSEDSVADLG*SCAVAF
Trigger: AAAAGCAACTGCACAAGACAACCCCAAATCTGCCAC...GCTGTCCTCACTGGGAAGAAGGTAGTACAGCTGGATGTGAGAGACAACATGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527892.5
ENST00000674555.1
ENST00000674997.1
3UTR-3UTR CAA 90 bp TTTCACCATGTTGTCTCTCACATCCAGCTGTACTACCTTCTTCCCAGTGAGGACACTTGGCGCCTTGTCTaGAGGAACTTCCTCTCCTTC +
Preference number: 3 (lower is better)
Translates to: FHHVVSHIQLYYLLPSEDTWRLV*RNFLSF
Trigger: GAAGGAGAGGAAGTTCCTCAAGACAAGGCGCCAAGT...GTCCTCACTGGGAAGAAGGTAGTACAGCTGGATGTGAGAGACAACATGGTGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527892.5
ENST00000674555.1
ENST00000674997.1
ENST00000675774.1
3UTR-3UTR CAA 90 bp CCAAAATCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCGATTGCACAATAGCATaGGGCATCACCTTAACCCCC +
Preference number: 3 (lower is better)
Translates to: PKSESISRPPVLANSTLGDCTIA*GITLTP
Trigger: GGGGGTTAAGGTGATGCCCAATGCTATTGTGCAATC...GCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGATTTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674997.1
3UTR-3UTR CAA 90 bp AATCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCAGTGGCAGATTTGGGGTaGTCTTGTGCAGTTGCTTTT +
Preference number: 3 (lower is better)
Translates to: NLSLFPGHQSWPTQHWAPVADLG*SCAVAF
Trigger: AAAAGCAACTGCACAAGACAACCCCAAATCTGCCAC...TGGAGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
3UTR-3UTR CAA 90 bp CCACCCATGCAGTCACCTAAGGCTTACATAAGTGCTTTGCAACCTCTGAATAGGGGAAAGGAACATGACTaGGCGCCTTGTCTTGAGGAA +
Preference number: 3 (lower is better)
Translates to: PPMQSPKAYISALQPLNRGKEHD*APCLEE
Trigger: TTCCTCAAGACAAGGCGCCAAGTCATGTTCCTTTCC...CCTATTCAGAGGTTGCAAAGCACTTATGTAAGCCTTAGGTGACTGCATGGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527892.5
3UTR-3UTR CAA 90 bp CAAAATCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTGATTGCACAATAGCATaGGGCATCACCTTAACCCCC +
Preference number: 3 (lower is better)
Translates to: QNLSLFPGHQSWPTQHWADCTIA*GITLTP
Trigger: GGGGGTTAAGGTGATGCCCAATGCTATTGTGCAATC...AGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGATTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674997.1
3UTR-3UTR CAA 90 bp ATTTGTAACGCAAATACAACAGGTATCAGAACTGCTGGCCCCAGATTAAGCTTCTCCAGGCCACCAGTCTaGGCCAACTCAACATTGGGC +
Preference number: 3 (lower is better)
Translates to: ICNANTTGIRTAGPRLSFSRPPV*ANSTLG
Trigger: GCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGA...GAAGCTTAATCTGGGGCCAGCAGTTCTGATACCTGTTGTATTTGCGTTACAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527892.5
ENST00000535724.6
3UTR-3UTR CAA 90 bp CTCACATCCAGCTGTACTACCTTCTTCCCAGTGAGGACAGCCACACCACCATTCAAAACCACAGTTCTTTaGAAAGAGGAGGTCGCATGT +
Preference number: 3 (lower is better)
Translates to: LTSSCTTFFPVRTATPPFKTTVL*KEEVAC
Trigger: ACATGCGACCTCCTCTTTCAAAAGAACTGTGGTTTT...GAATGGTGGTGTGGCTGTCCTCACTGGGAAGAAGGTAGTACAGCTGGATGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527892.5
ENST00000674555.1
ENST00000674997.1
ENST00000675774.1
ENST00000676144.1
3UTR-3UTR CAA 90 bp CCGTCTCCAGGTTTAACTGTGAAGCACCAGGTCTCTGAACTCAGATTTGTAGTAAGGCAGCAGAATCACTaGAATCCGGGAGGTAGAGGT +
Preference number: 3 (lower is better)
Translates to: PSPGLTVKHQVSELRFVVRQQNH*NPGGRG
Trigger: ACCTCTACCTCCCGGATTCAAGTGATTCTGCTGCCT...TACTACAAATCTGAGTTCAGAGACCTGGTGCTTCACAGTTAAACCTGGAGACGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676229.1
3UTR CCA 72 bp GAAGAGGGCGCTAGAAAAGACTTAGAGGATTCAGGTTaGGTCAGGGGATTTGGAGGAAGGTTTAAGGAAGTC +
Preference number: 3 (lower is better)
Translates to: EEGARKDLEDSG*VRGFGGRFKEV
Trigger: GACTTCCTTAAACCTTCCTCCAAATCCCCTGACCCAACCTGAATCCTCTAAGTCTTTTCTAGCGCCCTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675050.1
3UTR-3UTR CAA 90 bp CAAAATCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTGTGGCAGATTTGGGGTaGTCTTGTGCAGTTGCTTTT +
Preference number: 3 (lower is better)
Translates to: QNLSLFPGHQSWPTQHWAVADLG*SCAVAF
Trigger: AAAAGCAACTGCACAAGACAACCCCAAATCTGCCAC...AGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGATTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
3UTR-3UTR CAA 90 bp AACTGCTGGCCCCAGATTAAGCTTCAGATGGTGAACTCTGTGCACTTCCACCCAAGTTTGGCTACTTCATaGAGATCTTCATGCTGCTCA +
Preference number: 3 (lower is better)
Translates to: NCWPQIKLQMVNSVHFHPSLATS*RSSCCS
Trigger: TGAGCAGCATGAAGATCTCAATGAAGTAGCCAAACT...TGGGTGGAAGTGCACAGAGTTCACCATCTGAAGCTTAATCTGGGGCCAGCAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527892.5
ENST00000535724.6
3UTR-3UTR CAA 90 bp ACAGCTTTTTGGTCACCAAGGGATCCCTCACCAGAACTAATCTCAGTGTTTAGCGGAAAGGAACATGACTaGGCGCCTTGTCTTGAGGAA +
Preference number: 3 (lower is better)
Translates to: TAFWSPRDPSPELISVFSGKEHD*APCLEE
Trigger: TTCCTCAAGACAAGGCGCCAAGTCATGTTCCTTTCC...GCTAAACACTGAGATTAGTTCTGGTGAGGGATCCCTTGGTGACCAAAAAGCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675774.1
3UTR-3UTR CAA 90 bp TCAAGAGATGATGGTCCTTCCATGAGTCCGTCTCCAGGTTTAACTGTGAAGCACGGTGCTGCAATTTGCTaGCTTTCTAATATGCGTGGC +
Preference number: 3 (lower is better)
Translates to: SRDDGPSMSPSPGLTVKHGAAIC*LSNMRG
Trigger: GCCACGCATATTAGAAAGCAAGCAAATTGCAGCACC...GTGCTTCACAGTTAAACCTGGAGACGGACTCATGGAAGGACCATCATCTCTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
3UTR-3UTR CAA 90 bp GGTGCTGCAATTTGCTTGCTTTCTAATATGCGTGGCTTTCCACCTTCACCCACCAGTTTGGCTACTTCATaGAGATCTTCATGCTGCTCA +
Preference number: 3 (lower is better)
Translates to: GAAICLLSNMRGFPPSPTSLATS*RSSCCS
Trigger: TGAGCAGCATGAAGATCTCAATGAAGTAGCCAAACT...GGTGGGTGAAGGTGGAAAGCCACGCATATTAGAAAGCAAGCAAATTGCAGCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674957.1
3UTR-3UTR CAA 90 bp GGTTGGGTCAGGGGATTTGGAGGAAGGTTTAAGGAAGTCAGGCTTTGTTCTGGACAGCAAATGTTCATTTaGAGAGGATCTCTGGTTTCC +
Preference number: 3 (lower is better)
Translates to: GWVRGFGGRFKEVRLCSGQQMFI*RGSLVS
Trigger: GGAAACCAGAGATCCTCTCAAAATGAACATTTGCTG...TCCAGAACAAAGCCTGACTTCCTTAAACCTTCCTCCAAATCCCCTGACCCAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675050.1
3UTR-3UTR CAA 90 bp CCAGGTTTAACTGTGAAGCACCAGGTCTCTGAACTCAGATTTGTAGTAAGTGCCAGAAAAATCCTGTGCTaGGTCGGTGCTGCAATTTGC +
Preference number: 3 (lower is better)
Translates to: PGLTVKHQVSELRFVVSARKILC*VGAAIC
Trigger: GCAAATTGCAGCACCGACCAAGCACAGGATTTTTCT...GGCACTTACTACAAATCTGAGTTCAGAGACCTGGTGCTTCACAGTTAAACCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
3UTR GCA 72 bp GAAAAATCCTGTGCTTGGTCGGTGCTGCAATTTGCTTaGTTTCTAATATGCGTGGCTTTCCACCTTCACCCA +
Preference number: 3 (lower is better)
Translates to: EKSCAWSVLQFA*FLICVAFHLHP
Trigger: TGGGTGAAGGTGGAAAGCCACGCATATTAGAAAGCAAGCAAATTGCAGCACCGACCAAGCACAGGATTTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
3UTR-3UTR CAA 90 bp ATGTGGTCAGTTTCTACCTTCCTGCCGTCTTTCAGCTTGATAAGTAACTTGCCAGTGGCAGATTTGGGGTaGTCTTGTGCAGTTGCTTTT +
Preference number: 3 (lower is better)
Translates to: MWSVSTFLPSFSLISNLPVADLG*SCAVAF
Trigger: AAAAGCAACTGCACAAGACAACCCCAAATCTGCCAC...TGGCAAGTTACTTATCAAGCTGAAAGACGGCAGGAAGGTAGAAACTGACCACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674997.1
3UTR-3UTR CAA 90 bp CAAAATCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTTTGGAGTACCTCCTGTaGCAATCAAGCACTTTTCAT +
Preference number: 3 (lower is better)
Translates to: QNLSLFPGHQSWPTQHWALEYLL*QSSTFH
Trigger: ATGAAAAGTGCTTGATTGCAACAGGAGGTACTCCAA...AGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527892.5
ENST00000674555.1
ENST00000674997.1
3UTR GCA 72 bp CTGAGAAAAATCCTGTGCTTGGTCGGTGCTGCAATTTaGTTGCTTTCTAATATGCGTGGCTTTCCACCTTCA +
Preference number: 3 (lower is better)
Translates to: LRKILCLVGAAI*LLSNMRGFPPS
Trigger: TGAAGGTGGAAAGCCACGCATATTAGAAAGCAAGCAAATTGCAGCACCGACCAAGCACAGGATTTTTCTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
3UTR CCA 72 bp GGTATACCTGTACTGCAAATTCTTACGGTGGAGATTTaGCCTGTTCTCCCAGTGTTCAGAAGGGATTTGGTT +
Preference number: 3 (lower is better)
Translates to: GIPVLQILTVEI*PVLPVFRRDLV
Trigger: AACCAAATCCCTTCTGAACACTGGGAGAACAGGCCAAATCTCCACCGTAAGAATTTGCAGTACAGGTATACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676229.1
3UTR CCA 72 bp TATTGTTCGGTATACCTGTACTGCAAATTCTTACGGTaGAGATTTGGCCTGTTCTCCCAGTGTTCAGAAGGG +
Preference number: 3 (lower is better)
Translates to: YCSVYLYCKFLR*RFGLFSQCSEG
Trigger: CCCTTCTGAACACTGGGAGAACAGGCCAAATCTCCACCGTAAGAATTTGCAGTACAGGTATACCGAACAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676229.1
3UTR-3UTR CAA 90 bp ACAGCTTTTTGGTCACCAAGGGATCCCTCACCAGAACTAATCTCAGTGTTTAGCAAAACCACAGTTCTTTaGAAAGAGGAGGTCGCATGT +
Preference number: 3 (lower is better)
Translates to: TAFWSPRDPSPELISVFSKTTVL*KEEVAC
Trigger: ACATGCGACCTCCTCTTTCAAAAGAACTGTGGTTTT...GCTAAACACTGAGATTAGTTCTGGTGAGGGATCCCTTGGTGACCAAAAAGCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675774.1
3UTR TCA 72 bp CTCCTTCTGAAGCTGAAAGCAACAGAACAGACTGGATaGATCTTCTTGAAGTCTCAGATGATTCTTTGCCAC +
Preference number: 3 (lower is better)
Translates to: LLLKLKATEQTG*IFLKSQMILCH
Trigger: GTGGCAAAGAATCATCTGAGACTTCAAGAAGATTCATCCAGTCTGTTCTGTTGCTTTCAGCTTCAGAAGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675774.1
3UTR TCA 72 bp TCAGGCTTTGTTCTGGACTGGATGCTGGTGATTCTGTaGTTGGATTGGGTATCTTATCAACTCAATCTTATC +
Preference number: 3 (lower is better)
Translates to: SGFVLDWMLVIL*LDWVSYQLNLI
Trigger: GATAAGATTGAGTTGATAAGATACCCAATCCAATCACAGAATCACCAGCATCCAGTCCAGAACAAAGCCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675050.1
3UTR CCA 72 bp TCCTCTCCTTCTGAAGCTGAAAGCAACAGAACAGACTaGATGAATCTTCTTGAAGTCTCAGATGATTCTTTG +
Preference number: 3 (lower is better)
Translates to: SSPSEAESNRTD*MNLLEVSDDSL
Trigger: CAAAGAATCATCTGAGACTTCAAGAAGATTCATCCAGTCTGTTCTGTTGCTTTCAGCTTCAGAAGGAGAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675774.1
3UTR TCA 72 bp GTTCAGGCAATCTTCATGTTTTTGTCTGTGTTCACATaGTTATGGAGCGGTCTTGTTTTTGTCTCAATCCAC +
Preference number: 3 (lower is better)
Translates to: VQAIFMFLSVFT*LWSGLVFVSIH
Trigger: GTGGATTGAGACAAAAACAAGACCGCTCCATAATCATGTGAACACAGACAAAAACATGAAGATTGCCTGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000675050.1
CDS-3UTR GCA 90 bp GTCCTCCCCCTGGACGGGAGCCTGTGGAACTGCCGGGGTGCTGGGAGGAATAGTGGGAGCCGGTTCCTCTaGCTCGGGCTTCGGACGCAC +
Preference number: 4 (lower is better)
Translates to: VLPLDGSLWNCRGAGRNSGSRFL*LGLRTH
Trigger: GTGCGTCCGAAGCCCGAGGCAGAGGAACCGGCTCCC...ACTATTCCTCCCAGCACCCCGGCAGTTCCACAGGCTCCCGTCCAGGGGGAGGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674997.1
ENST00000675037.1
CDS-3UTR GCA 90 bp CTCCCCCTGGACGGGAGCCTGTGGAACTGCCGGGGTGCTGGGAGGAATAGTAATGGGAGCCGGTTCCTCTaGCTCGGGCTTCGGACGCAC +
Preference number: 4 (lower is better)
Translates to: LPLDGSLWNCRGAGRNSNGSRFL*LGLRTH
Trigger: GTGCGTCCGAAGCCCGAGGCAGAGGAACCGGCTCCC...ATTACTATTCCTCCCAGCACCCCGGCAGTTCCACAGGCTCCCGTCCAGGGGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674997.1
ENST00000675037.1
CDS-3UTR CCA 90 bp GTCCTCCCCCTGGACGGGAGCCTGTGGAACTGCCGGGGTGCTGGGAGGAATAGTCTGGAACAAGTTGCCTaGGAGCCGGTTCCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: VLPLDGSLWNCRGAGRNSLEQVA*EPVPLP
Trigger: AGGCAGAGGAACCGGCTCCCAGGCAACTTGTTCCAG...ACTATTCCTCCCAGCACCCCGGCAGTTCCACAGGCTCCCGTCCAGGGGGAGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000416073.7
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000675037.1
CDS-3UTR CCA 90 bp GTCCTCCCCCTGGACGGGAGCCTGTGGAACTGCCGGGGTGCTGGGAGGAATAGTGATCCCGAGCCCGGATaGATCTGGCTGCAGCAAAAG +
Preference number: 4 (lower is better)
Translates to: VLPLDGSLWNCRGAGRNSDPEPG*IWLQQK
Trigger: CTTTTGCTGCAGCCAGATCCATCCGGGCTCGGGATC...ACTATTCCTCCCAGCACCCCGGCAGTTCCACAGGCTCCCGTCCAGGGGGAGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
ENST00000675037.1
CDS-3UTR CCA 90 bp CAGCCAAACTGGAGAGGAGCGGGAAAGGGAAGGGGCAGTGGGGGAAGGGAGGGGGATCCCGAGCCCGGATaGATCTGGCTGCAGCAAAAG +
Preference number: 4 (lower is better)
Translates to: QPNWRGAGKGRGSGGREGDPEPG*IWLQQK
Trigger: CTTTTGCTGCAGCCAGATCCATCCGGGCTCGGGATC...CCCCTCCCTTCCCCCACTGCCCCTTCCCTTTCCCGCTCCTCTCCAGTTTGGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000675050.1
CDS-3UTR TCA 90 bp GTCCTCCCCCTGGACGGGAGCCTGTGGAACTGCCGGGGTGCTGGGAGGAATAGTCTACCTTCTTCCCAGTaGGGACAGCCACACCACCAT +
Preference number: 4 (lower is better)
Translates to: VLPLDGSLWNCRGAGRNSLPSSQ*GQPHHH
Trigger: ATGGTGGTGTGGCTGTCCTCACTGGGAAGAAGGTAG...ACTATTCCTCCCAGCACCCCGGCAGTTCCACAGGCTCCCGTCCAGGGGGAGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674957.1
ENST00000674997.1
ENST00000675037.1
CDS-3UTR GCA 90 bp GTCCTCCCCCTGGACGGGAGCCTGTGGAACTGCCGGGGTGCTGGGAGGAATAGTATCGCTGGAACAAGTTaGCTGGGAGCCGGTTCCTCT +
Preference number: 4 (lower is better)
Translates to: VLPLDGSLWNCRGAGRNSIAGTS*LGAGSS
Trigger: AGAGGAACCGGCTCCCAGGCAACTTGTTCCAGCGAT...ACTATTCCTCCCAGCACCCCGGCAGTTCCACAGGCTCCCGTCCAGGGGGAGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000416073.7
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000675037.1
CDS-3UTR GCA 90 bp GTCCTCCCCCTGGACGGGAGCCTGTGGAACTGCCGGGGTGCTGGGAGGAATAGTCTCCAGGCCCACAGCTaGCACTATGTGGTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: VLPLDGSLWNCRGAGRNSLQAHS*HYVVSF
Trigger: GAAACTGACCACATAGTGGCAGCTGTGGGCCTGGAG...ACTATTCCTCCCAGCACCCCGGCAGTTCCACAGGCTCCCGTCCAGGGGGAGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
ENST00000675037.1
CDS-3UTR CCA 90 bp GTCCTCCCCCTGGACGGGAGCCTGTGGAACTGCCGGGGTGCTGGGAGGAATAGTGGAACATGCCATCGCTaGAACAAGTTGCCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: VLPLDGSLWNCRGAGRNSGTCHR*NKLPGS
Trigger: GCTCCCAGGCAACTTGTTCCAGCGATGGCATGTTCC...ACTATTCCTCCCAGCACCCCGGCAGTTCCACAGGCTCCCGTCCAGGGGGAGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000416073.7
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000675037.1
CDS-3UTR TCA 90 bp GTCCTCCCCCTGGACGGGAGCCTGTGGAACTGCCGGGGTGCTGGGAGGAATAGTCTTGGCGCCTTGTCTTaGGGAACTTCCTCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: VLPLDGSLWNCRGAGRNSLGALS*GTSSPS
Trigger: TGAAGGAGAGGAAGTTCCTCAAGACAAGGCGCCAAG...ACTATTCCTCCCAGCACCCCGGCAGTTCCACAGGCTCCCGTCCAGGGGGAGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416073.7
CDS-3UTR GCA 90 bp TCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCAGGCCCACAGGGAGCCGGTTCCTCTaGCTCGGGCTTCGGACGCAC +
Preference number: 4 (lower is better)
Translates to: SISRPPVLANSTLGSRPTGSRFL*LGLRTH
Trigger: GTGCGTCCGAAGCCCGAGGCAGAGGAACCGGCTCCC...TGTGGGCCTGGAGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674997.1
CDS-3UTR GCA 90 bp CTCCCCCTGGACGGGAGCCTGTGGAACTGCCGGGGTGCTGGGAGGAATAGTAATGGGCTGCAGTGGGTTTaGCAATTCCACTGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: LPLDGSLWNCRGAGRNSNGLQWV*QFHCGA
Trigger: AGCCCCACAGTGGAATTGGCAAACCCACTGCAGCCC...ATTACTATTCCTCCCAGCACCCCGGCAGTTCCACAGGCTCCCGTCCAGGGGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
ENST00000675037.1
CDS-3UTR GCA 90 bp CTCCCCCTGGACGGGAGCCTGTGGAACTGCCGGGGTGCTGGGAGGAATAGTAATCCTCCTCTCAGGGGCTaGAGTGGGTTTGCCAATTCC +
Preference number: 4 (lower is better)
Translates to: LPLDGSLWNCRGAGRNSNPPLRG*SGFANS
Trigger: GGAATTGGCAAACCCACTGCAGCCCCTGAGAGGAGG...ATTACTATTCCTCCCAGCACCCCGGCAGTTCCACAGGCTCCCGTCCAGGGGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
ENST00000675037.1
CDS-3UTR CCA 90 bp CTCCCCCTGGACGGGAGCCTGTGGAACTGCCGGGGTGCTGGGAGGAATAGTAATGAGCCCGGATGGATCTaGCTGCAGCAAAAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: LPLDGSLWNCRGAGRNSNEPGWI*LQQKQL
Trigger: CAGCTGCTTTTGCTGCAGCCAGATCCATCCGGGCTC...ATTACTATTCCTCCCAGCACCCCGGCAGTTCCACAGGCTCCCGTCCAGGGGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
ENST00000675037.1
CDS-3UTR CCA 90 bp CTCCCCCTGGACGGGAGCCTGTGGAACTGCCGGGGTGCTGGGAGGAATAGTAATATACAATCAGTACCCTaGCCCCAGGATCCCGAGCCC +
Preference number: 4 (lower is better)
Translates to: LPLDGSLWNCRGAGRNSNIQSVP*PQDPEP
Trigger: GGGCTCGGGATCCTGGGGCCAGGGTACTGATTGTAT...ATTACTATTCCTCCCAGCACCCCGGCAGTTCCACAGGCTCCCGTCCAGGGGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
ENST00000675037.1
CDS-3UTR CCA 90 bp CTCCCCCTGGACGGGAGCCTGTGGAACTGCCGGGGTGCTGGGAGGAATAGTAATTGGCCAACTCAACATTaGGCTCCAGGCCCACAGCTG +
Preference number: 4 (lower is better)
Translates to: LPLDGSLWNCRGAGRNSNWPTQH*APGPQL
Trigger: CAGCTGTGGGCCTGGAGCCCAATGTTGAGTTGGCCA...ATTACTATTCCTCCCAGCACCCCGGCAGTTCCACAGGCTCCCGTCCAGGGGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
ENST00000675037.1
CDS-3UTR CCA 90 bp CTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCAGGCCTGGACGGGAGCCTGTaGAACTGCCGGGGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: LSLFPGHQSWPTQHWAPGLDGSL*NCRGAG
Trigger: CCCAGCACCCCGGCAGTTCCACAGGCTCCCGTCCAG...GCCTGGAGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
CDS-3UTR TCA 90 bp GATGTCTGGCATGAGGACAGCAGGCAGAAGAGTCAAGAGATGATGGTCCTTCCAACGGGTCAAACACCGTaGGCCCCGGCCAGCTCCCCC +
Preference number: 4 (lower is better)
Translates to: DVWHEDSRQKSQEMMVLPTGQTP*APASSP
Trigger: GGGGGAGCTGGCCGGGGCTCACGGTGTTTGACCCGT...TGGAAGGACCATCATCTCTTGACTCTTCTGCCTGCTGTCCTCATGCCAGACATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676229.1
CDS-3UTR TCA 90 bp GTCCTCCCCCTGGACGGGAGCCTGTGGAACTGCCGGGGTGCTGGGAGGAATAGTTTCTCGGGGAAGAGTTaGATCACTTCTGTGCCCAAG +
Preference number: 4 (lower is better)
Translates to: VLPLDGSLWNCRGAGRNSFSGKS*ITSVPK
Trigger: CTTGGGCACAGAAGTGATTCAACTCTTCCCCGAGAA...ACTATTCCTCCCAGCACCCCGGCAGTTCCACAGGCTCCCGTCCAGGGGGAGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
ENST00000675037.1
CDS-3UTR GCA 90 bp CTCACATCCAGCTGTACTACCTTCTTCCCAGTGAGGACAGCCACACCACCATTCGGGAGCCGGTTCCTCTaGCTCGGGCTTCGGACGCAC +
Preference number: 4 (lower is better)
Translates to: LTSSCTTFFPVRTATPPFGSRFL*LGLRTH
Trigger: GTGCGTCCGAAGCCCGAGGCAGAGGAACCGGCTCCC...GAATGGTGGTGTGGCTGTCCTCACTGGGAAGAAGGTAGTACAGCTGGATGTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527892.5
ENST00000674555.1
ENST00000674997.1
ENST00000675774.1
CDS-3UTR CCA 90 bp TCTGTGCCCAAGGCTCGAGAGGACAGTGGGCATGAGGGCCTCGGTGCTCAAGTTGATCCCGAGCCCGGATaGATCTGGCTGCAGCAAAAG +
Preference number: 4 (lower is better)
Translates to: SVPKAREDSGHEGLGAQVDPEPG*IWLQQK
Trigger: CTTTTGCTGCAGCCAGATCCATCCGGGCTCGGGATC...AACTTGAGCACCGAGGCCCTCATGCCCACTGTCCTCTCGAGCCTTGGGCACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527892.5
ENST00000535724.6
CDS-3UTR CCA 90 bp TCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCAGGCTGGACGGGAGCCTGTaGAACTGCCGGGGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: SESISRPPVLANSTLGSRLDGSL*NCRGAG
Trigger: CCCAGCACCCCGGCAGTTCCACAGGCTCCCGTCCAG...CCTGGAGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
CDS-3UTR CCA 90 bp CACATCCAGCTGTACTACCTTCTTCCCAGTGAGGACAGCCACACCACCATTCTCCTGGACGGGAGCCTGTaGAACTGCCGGGGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: HIQLYYLLPSEDSHTTILLDGSL*NCRGAG
Trigger: CCCAGCACCCCGGCAGTTCCACAGGCTCCCGTCCAG...GAGAATGGTGGTGTGGCTGTCCTCACTGGGAAGAAGGTAGTACAGCTGGATGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527892.5
ENST00000674555.1
ENST00000674997.1
CDS-3UTR TCA 90 bp GTCCTCCCCCTGGACGGGAGCCTGTGGAACTGCCGGGGTGCTGGGAGGAATAGTTTAAGCTTCAGATGGTaGACTCTGTGCACTTCCACC +
Preference number: 4 (lower is better)
Translates to: VLPLDGSLWNCRGAGRNSLSFRW*TLCTST
Trigger: GGTGGAAGTGCACAGAGTTCACCATCTGAAGCTTAA...ACTATTCCTCCCAGCACCCCGGCAGTTCCACAGGCTCCCGTCCAGGGGGAGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527892.5
ENST00000535724.6
CDS-3UTR TCA 90 bp CTCCCCCTGGACGGGAGCCTGTGGAACTGCCGGGGTGCTGGGAGGAATAGTAATAGAGGTCTGGAGGGGTaGGGGAAGTTCGGAAATGAA +
Preference number: 4 (lower is better)
Translates to: LPLDGSLWNCRGAGRNSNRGLEG*GKFGNE
Trigger: TTCATTTCCGAACTTCCCTCACCCCTCCAGACCTCT...ATTACTATTCCTCCCAGCACCCCGGCAGTTCCACAGGCTCCCGTCCAGGGGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000674957.1
CDS-3UTR GCA 90 bp GTCCTCCCCCTGGACGGGAGCCTGTGGAACTGCCGGGGTGCTGGGAGGAATAGTCAGAATTATCGATTTTaGCCCCTGATGCACCAGAGC +
Preference number: 4 (lower is better)
Translates to: VLPLDGSLWNCRGAGRNSQNYRF*PLMHQS
Trigger: GCTCTGGTGCATCAGGGGGCAAAATCGATAATTCTG...ACTATTCCTCCCAGCACCCCGGCAGTTCCACAGGCTCCCGTCCAGGGGGAGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000416073.7
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000675037.1
CDS-3UTR GCA 90 bp CAGCAGGCAGAAGAGTCAAGAGATGATGGTCCTTCCATGAGTCCGTCTCCAGGTCGACCGGAGGCCTACTaGGCAGGCGTAGCACTCGCT +
Preference number: 4 (lower is better)
Translates to: QQAEESRDDGPSMSPSPGRPEAY*AGVALA
Trigger: AGCGAGTGCTACGCCTGCGCAGTAGGCCTCCGGTCG...ACCTGGAGACGGACTCATGGAAGGACCATCATCTCTTGACTCTTCTGCCTGCTG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676229.1
CDS-3UTR GCA 90 bp CAGCCAAACTGGAGAGGAGCGGGAAAGGGAAGGGGCAGTGGGGGAAGGGAGGGGAGGTTTATTGCTCACTaGAGCAAGAAAGAAGGCGCC +
Preference number: 4 (lower is better)
Translates to: QPNWRGAGKGRGSGGREGRFIAH*SKKEGA
Trigger: GGCGCCTTCTTTCTTGCTGCAGTGAGCAATAAACCT...CCCCTCCCTTCCCCCACTGCCCCTTCCCTTTCCCGCTCCTCTCCAGTTTGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000675050.1
CDS-3UTR CCA 90 bp GTCCTCCCCCTGGACGGGAGCCTGTGGAACTGCCGGGGTGCTGGGAGGAATAGTGAAAGGAACATGACTTaGCGCCTTGTCTTGAGGAAC +
Preference number: 4 (lower is better)
Translates to: VLPLDGSLWNCRGAGRNSERNMT*RLVLRN
Trigger: GTTCCTCAAGACAAGGCGCCAAGTCATGTTCCTTTC...ACTATTCCTCCCAGCACCCCGGCAGTTCCACAGGCTCCCGTCCAGGGGGAGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
ENST00000675037.1
CDS-3UTR CCA 90 bp AATCACTTGAATCCGGGAGGTAGAGGTTGTGATGAGCCTAGGTCGCACCATTGCCTGGACGGGAGCCTGTaGAACTGCCGGGGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: NHLNPGGRGCDEPRSHHCLDGSL*NCRGAG
Trigger: CCCAGCACCCCGGCAGTTCCACAGGCTCCCGTCCAG...GCAATGGTGCGACCTAGGCTCATCACAACCTCTACCTCCCGGATTCAAGTGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676229.1
CDS-3UTR CCA 90 bp GTCCTCCCCCTGGACGGGAGCCTGTGGAACTGCCGGGGTGCTGGGAGGAATAGTAGGTATCAGAACTGCTaGCCCCAGATTAAGCTTCAG +
Preference number: 4 (lower is better)
Translates to: VLPLDGSLWNCRGAGRNSRYQNC*PQIKLQ
Trigger: CTGAAGCTTAATCTGGGGCCAGCAGTTCTGATACCT...ACTATTCCTCCCAGCACCCCGGCAGTTCCACAGGCTCCCGTCCAGGGGGAGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000527892.5
ENST00000535724.6
CDS-3UTR CCA 90 bp TTTCCTTCAAGGAAGCAGCCTGCAGTAGGTCACTGTGGAGTCCCACCCCCAGCCTGGCAGCAGCCAAACTaGAGAGGAGCGGGAAAGGGA +
Preference number: 4 (lower is better)
Translates to: FPSRKQPAVGHCGVPPPAWQQPN*RGAGKG
Trigger: TCCCTTTCCCGCTCCTCTCCAGTTTGGCTGCTGCCA...GGCTGGGGGTGGGACTCCACAGTGACCTACTGCAGGCTGCTTCCTTGAAGGAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675050.1
CDS-3UTR CCA 90 bp AGGCCAGTTGGTAGCAACACCAAGTCCTGGCCGACAGTACCGGGCGAGCTTCCAGTCTTACTTCACCTCTaGGCCCAGCAGAACTTCCCC +
Preference number: 4 (lower is better)
Translates to: RPVGSNTKSWPTVPGELPVLLHL*AQQNFP
Trigger: GGGGAAGTTCTGCTGGGCCCAGAGGTGAAGTAAGAC...TGGAAGCTCGCCCGGTACTGTCGGCCAGGACTTGGTGTTGCTACCAACTGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675050.1
CDS-3UTR TCA 90 bp CTCCCCCTGGACGGGAGCCTGTGGAACTGCCGGGGTGCTGGGAGGAATAGTAATTCGGATACCAGTTCCTaGCTGCTCTGTGGCAGATTT +
Preference number: 4 (lower is better)
Translates to: LPLDGSLWNCRGAGRNSNSDTSS*LLCGRF
Trigger: AAATCTGCCACAGAGCAGTCAGGAACTGGTATCCGA...ATTACTATTCCTCCCAGCACCCCGGCAGTTCCACAGGCTCCCGTCCAGGGGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
ENST00000675037.1
CDS-3UTR TCA 90 bp CAGCCAAACTGGAGAGGAGCGGGAAAGGGAAGGGGCAGTGGGGGAAGGGAGGGGGTTTGGCTACTTCATTaGGATCTTCATGCTGCTCAC +
Preference number: 4 (lower is better)
Translates to: QPNWRGAGKGRGSGGREGVWLLH*DLHAAH
Trigger: GTGAGCAGCATGAAGATCTCAATGAAGTAGCCAAAC...CCCCTCCCTTCCCCCACTGCCCCTTCCCTTTCCCGCTCCTCTCCAGTTTGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000675050.1
CDS-3UTR GCA 90 bp CTCCCCCTGGACGGGAGCCTGTGGAACTGCCGGGGTGCTGGGAGGAATAGTAATTCTACTCTTCACCTCTaGTCCAGCCCTATCAATGGC +
Preference number: 4 (lower is better)
Translates to: LPLDGSLWNCRGAGRNSNSTLHL*SSPING
Trigger: GCCATTGATAGGGCTGGAGCAGAGGTGAAGAGTAGA...ATTACTATTCCTCCCAGCACCCCGGCAGTTCCACAGGCTCCCGTCCAGGGGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
ENST00000675037.1
CDS-3UTR GCA 90 bp CTCCCCCTGGACGGGAGCCTGTGGAACTGCCGGGGTGCTGGGAGGAATAGTAATATACCAGTTCCTGACTaGTCTGTGGCAGATTTGGGG +
Preference number: 4 (lower is better)
Translates to: LPLDGSLWNCRGAGRNSNIPVPD*SVADLG
Trigger: CCCCAAATCTGCCACAGAGCAGTCAGGAACTGGTAT...ATTACTATTCCTCCCAGCACCCCGGCAGTTCCACAGGCTCCCGTCCAGGGGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
ENST00000675037.1
CDS-3UTR GCA 90 bp GGGTGCCTGGCTTTAGGTGGAGTCAGGGAAGGACGTACAGAAGGGATATGGCAGGGGCTGCAGTGGGTTTaGCAATTCCACTGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: GCLALGGVREGRTEGIWQGLQWV*QFHCGA
Trigger: AGCCCCACAGTGGAATTGGCAAACCCACTGCAGCCC...CTGCCATATCCCTTCTGTACGTCCTTCCCTGACTCCACCTAAAGCCAGGCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675050.1
CDS-3UTR GCA 90 bp GGGTGCCTGGCTTTAGGTGGAGTCAGGGAAGGACGTACAGAAGGGATATGGCAGCCTCCTCTCAGGGGCTaGAGTGGGTTTGCCAATTCC +
Preference number: 4 (lower is better)
Translates to: GCLALGGVREGRTEGIWQPPLRG*SGFANS
Trigger: GGAATTGGCAAACCCACTGCAGCCCCTGAGAGGAGG...CTGCCATATCCCTTCTGTACGTCCTTCCCTGACTCCACCTAAAGCCAGGCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675050.1
CDS-3UTR GCA 90 bp GTCCTCCCCCTGGACGGGAGCCTGTGGAACTGCCGGGGTGCTGGGAGGAATAGTTATATCGTAGAAGCATaGAGCATCTCCACCCAGATG +
Preference number: 4 (lower is better)
Translates to: VLPLDGSLWNCRGAGRNSYIVEA*SISTQM
Trigger: CATCTGGGTGGAGATGCTGCATGCTTCTACGATATA...ACTATTCCTCCCAGCACCCCGGCAGTTCCACAGGCTCCCGTCCAGGGGGAGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416073.7
CDS-3UTR GCA 90 bp CTCCCCCTGGACGGGAGCCTGTGGAACTGCCGGGGTGCTGGGAGGAATAGTAATGTGCACTTCCACCCATaGAGTCACCTAAGGCTTACA +
Preference number: 4 (lower is better)
Translates to: LPLDGSLWNCRGAGRNSNVHFHP*SHLRLT
Trigger: TGTAAGCCTTAGGTGACTGCATGGGTGGAAGTGCAC...ATTACTATTCCTCCCAGCACCCCGGCAGTTCCACAGGCTCCCGTCCAGGGGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527892.5
ENST00000535724.6
CDS-3UTR GCA 90 bp GTCCTCCCCCTGGACGGGAGCCTGTGGAACTGCCGGGGTGCTGGGAGGAATAGTAACAGGTATCAGAACTaGTGGCCCCAGATTAAGCTT +
Preference number: 4 (lower is better)
Translates to: VLPLDGSLWNCRGAGRNSNRYQN*WPQIKL
Trigger: AAGCTTAATCTGGGGCCAGCAGTTCTGATACCTGTT...ACTATTCCTCCCAGCACCCCGGCAGTTCCACAGGCTCCCGTCCAGGGGGAGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000527892.5
ENST00000535724.6
CDS-3UTR GCA 90 bp TTTCCTTCAAGGAAGCAGCCTGCAGTAGGTCACTGTGGAGTCCCACCCCCAGCCCCCATGGGGGAACTATaGCATGCTTCAGGAAGAGGG +
Preference number: 4 (lower is better)
Translates to: FPSRKQPAVGHCGVPPPAPMGEL*HASGRG
Trigger: CCCTCTTCCTGAAGCATGGCATAGTTCCCCCATGGG...GGCTGGGGGTGGGACTCCACAGTGACCTACTGCAGGCTGCTTCCTTGAAGGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000675050.1
CDS-3UTR CCA 90 bp CGAGTCCCAACAATCTCTAGGGCAGCAAGGGTGCCTGGCTTTAGGTGGAGTCAGGAGCCCGGATGGATCTaGCTGCAGCAAAAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: RVPTISRAARVPGFRWSQEPGWI*LQQKQL
Trigger: CAGCTGCTTTTGCTGCAGCCAGATCCATCCGGGCTC...CTGACTCCACCTAAAGCCAGGCACCCTTGCTGCCCTAGAGATTGTTGGGACTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675050.1
CDS-3UTR CCA 90 bp GCCACAGCAGGTGTGTGCAAAGAGGTCTGGAGGGGTGAGGGAAGTTCGGAAATGGAGCCCGGATGGATCTaGCTGCAGCAAAAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: ATAGVCKEVWRGEGSSEMEPGWI*LQQKQL
Trigger: CAGCTGCTTTTGCTGCAGCCAGATCCATCCGGGCTC...CATTTCCGAACTTCCCTCACCCCTCCAGACCTCTTTGCACACACCTGCTGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
CDS-3UTR CCA 90 bp CGAGTCCCAACAATCTCTAGGGCAGCAAGGGTGCCTGGCTTTAGGTGGAGTCAGATACAATCAGTACCCTaGCCCCAGGATCCCGAGCCC +
Preference number: 4 (lower is better)
Translates to: RVPTISRAARVPGFRWSQIQSVP*PQDPEP
Trigger: GGGCTCGGGATCCTGGGGCCAGGGTACTGATTGTAT...CTGACTCCACCTAAAGCCAGGCACCCTTGCTGCCCTAGAGATTGTTGGGACTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675050.1
CDS-3UTR CCA 90 bp GTCCTCCCCCTGGACGGGAGCCTGTGGAACTGCCGGGGTGCTGGGAGGAATAGTTTGCCAATTCCACTGTaGGGCTTCAGTCTTCATGAA +
Preference number: 4 (lower is better)
Translates to: VLPLDGSLWNCRGAGRNSLPIPL*GFSLHE
Trigger: TTCATGAAGACTGAAGCCCCACAGTGGAATTGGCAA...ACTATTCCTCCCAGCACCCCGGCAGTTCCACAGGCTCCCGTCCAGGGGGAGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
ENST00000675037.1
CDS-3UTR CCA 90 bp CTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCAGGCGGGAGTCAAGTGTTGTaGGCCGAGGCCACAGCAGGT +
Preference number: 4 (lower is better)
Translates to: LSLFPGHQSWPTQHWAPGGSQVL*AEATAG
Trigger: ACCTGCTGTGGCCTCGGCCCACAACACTTGACTCCC...GCCTGGAGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674957.1
3UTR CAA 72 bp GTGAACTTCCTGAGAGGAGAGGAGGGGAGTCAAGTGTaGTGGGCCGAGGCCACAGCAGGTGTGTGCAAAGAG +
Preference number: 4 (lower is better)
Translates to: VNFLRGEEGSQV*WAEATAGVCKE
Trigger: CTCTTTGCACACACCTGCTGTGGCCTCGGCCCACAACACTTGACTCCCCTCCTCTCCTCTCAGGAAGTTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
CDS-3UTR TCA 90 bp GCCACAGCAGGTGTGTGCAAAGAGGTCTGGAGGGGTGAGGGAAGTTCGGAAATGCTACCTTCTTCCCAGTaGGGACAGCCACACCACCAT +
Preference number: 4 (lower is better)
Translates to: ATAGVCKEVWRGEGSSEMLPSSQ*GQPHHH
Trigger: ATGGTGGTGTGGCTGTCCTCACTGGGAAGAAGGTAG...CATTTCCGAACTTCCCTCACCCCTCCAGACCTCTTTGCACACACCTGCTGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
CDS-3UTR TCA 90 bp TCTGTGCCCAAGGCTCGAGAGGACAGTGGGCATGAGGGCCTCGGTGCTCAAGTTTCGGATACCAGTTCCTaGCTGCTCTGTGGCAGATTT +
Preference number: 4 (lower is better)
Translates to: SVPKAREDSGHEGLGAQVSDTSS*LLCGRF
Trigger: AAATCTGCCACAGAGCAGTCAGGAACTGGTATCCGA...AACTTGAGCACCGAGGCCCTCATGCCCACTGTCCTCTCGAGCCTTGGGCACAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527892.5
ENST00000535724.6
CDS-3UTR TCA 90 bp CTCCCCCTGGACGGGAGCCTGTGGAACTGCCGGGGTGCTGGGAGGAATAGTAATAGAAGAGTCAAGAGATaGTGGTCCTTCCATGAGTCC +
Preference number: 4 (lower is better)
Translates to: LPLDGSLWNCRGAGRNSNRRVKR*WSFHES
Trigger: GGACTCATGGAAGGACCATCATCTCTTGACTCTTCT...ATTACTATTCCTCCCAGCACCCCGGCAGTTCCACAGGCTCCCGTCCAGGGGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674957.1
CDS-3UTR TCA 90 bp GCCACAGCAGGTGTGTGCAAAGAGGTCTGGAGGGGTGAGGGAAGTTCGGAAATGGACAGATGTCTGGCATaGGGACAGCAGGCAGAAGAG +
Preference number: 4 (lower is better)
Translates to: ATAGVCKEVWRGEGSSEMDRCLA*GQQAEE
Trigger: CTCTTCTGCCTGCTGTCCTCATGCCAGACATCTGTC...CATTTCCGAACTTCCCTCACCCCTCCAGACCTCTTTGCACACACCTGCTGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
CDS-3UTR GCA 90 bp CTCCCCCTGGACGGGAGCCTGTGGAACTGCCGGGGTGCTGGGAGGAATAGTAATCAGAATTATCGATTTTaGCCCCTGATGCACCAGAGC +
Preference number: 4 (lower is better)
Translates to: LPLDGSLWNCRGAGRNSNQNYRF*PLMHQS
Trigger: GCTCTGGTGCATCAGGGGGCAAAATCGATAATTCTG...ATTACTATTCCTCCCAGCACCCCGGCAGTTCCACAGGCTCCCGTCCAGGGGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000416073.7
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000675037.1
CDS-3UTR CCA 90 bp CTCCCCCTGGACGGGAGCCTGTGGAACTGCCGGGGTGCTGGGAGGAATAGTAATGAAAGGAACATGACTTaGCGCCTTGTCTTGAGGAAC +
Preference number: 4 (lower is better)
Translates to: LPLDGSLWNCRGAGRNSNERNMT*RLVLRN
Trigger: GTTCCTCAAGACAAGGCGCCAAGTCATGTTCCTTTC...ATTACTATTCCTCCCAGCACCCCGGCAGTTCCACAGGCTCCCGTCCAGGGGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
ENST00000675037.1
CDS-3UTR CCA 90 bp CTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCAGGCATACAATCAGTACCCTaGCCCCAGGATCCCGAGCCC +
Preference number: 4 (lower is better)
Translates to: LSLFPGHQSWPTQHWAPGIQSVP*PQDPEP
Trigger: GGGCTCGGGATCCTGGGGCCAGGGTACTGATTGTAT...GCCTGGAGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
CDS-3UTR CCA 90 bp CTCCCCCTGGACGGGAGCCTGTGGAACTGCCGGGGTGCTGGGAGGAATAGTAATTTCCTGACTGCTCTGTaGCAGATTTGGGGTTGTCTT +
Preference number: 4 (lower is better)
Translates to: LPLDGSLWNCRGAGRNSNFLTAL*QIWGCL
Trigger: AAGACAACCCCAAATCTGCCACAGAGCAGTCAGGAA...ATTACTATTCCTCCCAGCACCCCGGCAGTTCCACAGGCTCCCGTCCAGGGGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
ENST00000675037.1
CDS-3UTR TCA 90 bp CCAGTGACTGTTGCTCCTACAATTAAGAAGTACACTAGGTTGCTGCCATCTTTCACGGGTCAAACACCGTaGGCCCCGGCCAGCTCCCCC +
Preference number: 4 (lower is better)
Translates to: PVTVAPTIKKYTRLLPSFTGQTP*APASSP
Trigger: GGGGGAGCTGGCCGGGGCTCACGGTGTTTGACCCGT...GAAAGATGGCAGCAACCTAGTGTACTTCTTAATTGTAGGAGCAACAGTCACTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529877.1
CDS-3UTR TCA 90 bp CTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCAGGCCCATGGTCCAGTTGCTaGGGTATTCGGGGAGGATCT +
Preference number: 4 (lower is better)
Translates to: LSLFPGHQSWPTQHWAPGPWSSC*GIRGGS
Trigger: AGATCCTCCCCGAATACCTCAGCAACTGGACCATGG...GCCTGGAGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
CDS-3UTR TCA 90 bp GTACGCGTGTCTGTGCCCGCCAGGAATTCCCTGATAAGATGGGAAAGAGACCAGCCATGGTCCAGTTGCTaGGGTATTCGGGGAGGATCT +
Preference number: 4 (lower is better)
Translates to: VRVSVPARNSLIRWERDQPWSSC*GIRGGS
Trigger: AGATCCTCCCCGAATACCTCAGCAACTGGACCATGG...CTGGTCTCTTTCCCATCTTATCAGGGAATTCCTGGCGGGCACAGACACGCGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675050.1
CDS-3UTR TCA 90 bp CTCCCCCTGGACGGGAGCCTGTGGAACTGCCGGGGTGCTGGGAGGAATAGTAATGTTTGGCTACTTCATTaGGATCTTCATGCTGCTCAC +
Preference number: 4 (lower is better)
Translates to: LPLDGSLWNCRGAGRNSNVWLLH*DLHAAH
Trigger: GTGAGCAGCATGAAGATCTCAATGAAGTAGCCAAAC...ATTACTATTCCTCCCAGCACCCCGGCAGTTCCACAGGCTCCCGTCCAGGGGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
ENST00000675037.1
CDS-3UTR TCA 90 bp AACTGCTGGCCCCAGATTAAGCTTCAGATGGTGAACTCTGTGCACTTCCACCCAAGAGGACAGTGGGCATaGGGGCCTCGGTGCTCAAGT +
Preference number: 4 (lower is better)
Translates to: NCWPQIKLQMVNSVHFHPRGQWA*GPRCSS
Trigger: ACTTGAGCACCGAGGCCCTCATGCCCACTGTCCTCT...TGGGTGGAAGTGCACAGAGTTCACCATCTGAAGCTTAATCTGGGGCCAGCAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527892.5
ENST00000535724.6
CDS-3UTR TCA 90 bp CTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCAGGCGACAGATGTCTGGCATaGGGACAGCAGGCAGAAGAG +
Preference number: 4 (lower is better)
Translates to: LSLFPGHQSWPTQHWAPGDRCLA*GQQAEE
Trigger: CTCTTCTGCCTGCTGTCCTCATGCCAGACATCTGTC...GCCTGGAGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674957.1
CDS-3UTR TCA 90 bp GCCACAGCAGGTGTGTGCAAAGAGGTCTGGAGGGGTGAGGGAAGTTCGGAAATGAGTTTGAGACCAGCCTaGCCATCATGGAGAAACCCC +
Preference number: 4 (lower is better)
Translates to: ATAGVCKEVWRGEGSSEMSLRPA*PSWRNP
Trigger: GGGGTTTCTCCATGATGGTCAGGCTGGTCTCAAACT...CATTTCCGAACTTCCCTCACCCCTCCAGACCTCTTTGCACACACCTGCTGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676229.1
CDS-3UTR GCA 90 bp TCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCAGGCCCACACTCCAGGCCCACAGCTaGCACTATGTGGTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: SISRPPVLANSTLGSRPTLQAHS*HYVVSF
Trigger: GAAACTGACCACATAGTGGCAGCTGTGGGCCTGGAG...TGTGGGCCTGGAGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
CDS-3UTR GCA 90 bp TCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCAGGCCCACAGCATGCAGCATCTCCTaGCACCCAGATGTTAGAGCG +
Preference number: 4 (lower is better)
Translates to: SISRPPVLANSTLGSRPTACSIS*HPDVRA
Trigger: CGCTCTAACATCTGGGTGGCAGGAGATGCTGCATGC...TGTGGGCCTGGAGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
CDS-3UTR GCA 90 bp CTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCAGGCGCATGCAGCATCTCCTaGCACCCAGATGTTAGAGCG +
Preference number: 4 (lower is better)
Translates to: LSLFPGHQSWPTQHWAPGACSIS*HPDVRA
Trigger: CGCTCTAACATCTGGGTGGCAGGAGATGCTGCATGC...GCCTGGAGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
CDS-3UTR GCA 90 bp CTGCTTCCAGGAAGTCATGGGCTAGCAGGGAGACACATACACAAGGATGAGGCTGGGCTGCAGTGGGTTTaGCAATTCCACTGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: LLPGSHGLAGRHIHKDEAGLQWV*QFHCGA
Trigger: AGCCCCACAGTGGAATTGGCAAACCCACTGCAGCCC...AGCCTCATCCTTGTGTATGTGTCTCCCTGCTAGCCCATGACTTCCTGGAAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
CDS-3UTR GCA 90 bp CTCACATCCAGCTGTACTACCTTCTTCCCAGTGAGGACAGCCACACCACCATTCCCTCCTCTCAGGGGCTaGAGTGGGTTTGCCAATTCC +
Preference number: 4 (lower is better)
Translates to: LTSSCTTFFPVRTATPPFPPLRG*SGFANS
Trigger: GGAATTGGCAAACCCACTGCAGCCCCTGAGAGGAGG...GAATGGTGGTGTGGCTGTCCTCACTGGGAAGAAGGTAGTACAGCTGGATGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527892.5
ENST00000674555.1
ENST00000674997.1
CDS-3UTR GCA 90 bp CAGCAGGCAGAAGAGTCAAGAGATGATGGTCCTTCCATGAGTCCGTCTCCAGGTCCTCCTCTCAGGGGCTaGAGTGGGTTTGCCAATTCC +
Preference number: 4 (lower is better)
Translates to: QQAEESRDDGPSMSPSPGPPLRG*SGFANS
Trigger: GGAATTGGCAAACCCACTGCAGCCCCTGAGAGGAGG...ACCTGGAGACGGACTCATGGAAGGACCATCATCTCTTGACTCTTCTGCCTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
CDS-3UTR GCA 90 bp CTCCCCCTGGACGGGAGCCTGTGGAACTGCCGGGGTGCTGGGAGGAATAGTAATAACAGGTATCAGAACTaGTGGCCCCAGATTAAGCTT +
Preference number: 4 (lower is better)
Translates to: LPLDGSLWNCRGAGRNSNNRYQN*WPQIKL
Trigger: AAGCTTAATCTGGGGCCAGCAGTTCTGATACCTGTT...ATTACTATTCCTCCCAGCACCCCGGCAGTTCCACAGGCTCCCGTCCAGGGGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000527892.5
ENST00000535724.6
CDS-3UTR CCA 90 bp TCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCAGGGAGCCCGGATGGATCTaGCTGCAGCAAAAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: SESISRPPVLANSTLGSREPGWI*LQQKQL
Trigger: CAGCTGCTTTTGCTGCAGCCAGATCCATCCGGGCTC...CCTGGAGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
CDS-3UTR CCA 90 bp CTCACATCCAGCTGTACTACCTTCTTCCCAGTGAGGACAGCCACACCACCATTCGAGCCCGGATGGATCTaGCTGCAGCAAAAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: LTSSCTTFFPVRTATPPFEPGWI*LQQKQL
Trigger: CAGCTGCTTTTGCTGCAGCCAGATCCATCCGGGCTC...GAATGGTGGTGTGGCTGTCCTCACTGGGAAGAAGGTAGTACAGCTGGATGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527892.5
ENST00000674555.1
ENST00000674997.1
ENST00000675774.1
ENST00000676144.1
CDS-3UTR CCA 90 bp CTCACATCCAGCTGTACTACCTTCTTCCCAGTGAGGACAGCCACACCACCATTCGATCCCGAGCCCGGATaGATCTGGCTGCAGCAAAAG +
Preference number: 4 (lower is better)
Translates to: LTSSCTTFFPVRTATPPFDPEPG*IWLQQK
Trigger: CTTTTGCTGCAGCCAGATCCATCCGGGCTCGGGATC...GAATGGTGGTGTGGCTGTCCTCACTGGGAAGAAGGTAGTACAGCTGGATGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527892.5
ENST00000674555.1
ENST00000674997.1
ENST00000675774.1
ENST00000676144.1
CDS-3UTR CCA 90 bp GCAGGTGTGTGCAAAGAGGTCTGGAGGGGTGAGGGAAGTTCGGAAATGAAAGGAGATCCCGAGCCCGGATaGATCTGGCTGCAGCAAAAG +
Preference number: 4 (lower is better)
Translates to: AGVCKEVWRGEGSSEMKGDPEPG*IWLQQK
Trigger: CTTTTGCTGCAGCCAGATCCATCCGGGCTCGGGATC...TCCTTTCATTTCCGAACTTCCCTCACCCCTCCAGACCTCTTTGCACACACCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
CDS-3UTR CCA 90 bp TCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCAGGTGGCCAACTCAACATTaGGCTCCAGGCCCACAGCTG +
Preference number: 4 (lower is better)
Translates to: SESISRPPVLANSTLGSRWPTQH*APGPQL
Trigger: CAGCTGTGGGCCTGGAGCCCAATGTTGAGTTGGCCA...CCTGGAGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
CDS-3UTR CCA 90 bp TCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCAGGCCCACACCAGGCCACCAGTCTTaGCCAACTCAACATTGGGCT +
Preference number: 4 (lower is better)
Translates to: SISRPPVLANSTLGSRPTPGHQS*PTQHWA
Trigger: AGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGG...TGTGGGCCTGGAGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
CDS-3UTR CCA 90 bp ACCAACTGTGGGCAAACTACTGTCCACAAGACCAATAGCTTCATAGCCAACATCCTGGACGGGAGCCTGTaGAACTGCCGGGGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: TNCGQTTVHKTNSFIANILDGSL*NCRGAG
Trigger: CCCAGCACCCCGGCAGTTCCACAGGCTCCCGTCCAG...GATGTTGGCTATGAAGCTATTGGTCTTGTGGACAGTAGTTTGCCCACAGTTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
ENST00000675037.1
CDS-3UTR CCA 90 bp CCGTCTCCAGGTTTAACTGTGAAGCACCAGGTCTCTGAACTCAGATTTGTAGTACTGGACGGGAGCCTGTaGAACTGCCGGGGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: PSPGLTVKHQVSELRFVVLDGSL*NCRGAG
Trigger: CCCAGCACCCCGGCAGTTCCACAGGCTCCCGTCCAG...TACTACAAATCTGAGTTCAGAGACCTGGTGCTTCACAGTTAAACCTGGAGACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
CDS-3UTR CCA 90 bp ATTCAGGTTGGGTCAGGGGATTTGGAGGAAGGTTTAAGGAAGTCAGGCTTTGTTCTGGACGGGAGCCTGTaGAACTGCCGGGGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: IQVGSGDLEEGLRKSGFVLDGSL*NCRGAG
Trigger: CCCAGCACCCCGGCAGTTCCACAGGCTCCCGTCCAG...AACAAAGCCTGACTTCCTTAAACCTTCCTCCAAATCCCCTGACCCAACCTGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675050.1
CDS-3UTR CCA 90 bp CTCCCCCTGGACGGGAGCCTGTGGAACTGCCGGGGTGCTGGGAGGAATAGTAATTTGCCAATTCCACTGTaGGGCTTCAGTCTTCATGAA +
Preference number: 4 (lower is better)
Translates to: LPLDGSLWNCRGAGRNSNLPIPL*GFSLHE
Trigger: TTCATGAAGACTGAAGCCCCACAGTGGAATTGGCAA...ATTACTATTCCTCCCAGCACCCCGGCAGTTCCACAGGCTCCCGTCCAGGGGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
ENST00000675037.1
CDS-3UTR CCA 90 bp CTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCAGGCGTGTGCAAAGAGGTCTaGAGGGGTGAGGGAAGTTCG +
Preference number: 4 (lower is better)
Translates to: LSLFPGHQSWPTQHWAPGVCKEV*RGEGSS
Trigger: CGAACTTCCCTCACCCCTCCAGACCTCTTTGCACAC...GCCTGGAGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674957.1
CDS-3UTR TCA 90 bp CTCCCCCTGGACGGGAGCCTGTGGAACTGCCGGGGTGCTGGGAGGAATAGTAATAAACCACAGTTCTTTTaGAAGAGGAGGTCGCATGTA +
Preference number: 4 (lower is better)
Translates to: LPLDGSLWNCRGAGRNSNKPQFF*KRRSHV
Trigger: TACATGCGACCTCCTCTTTCAAAAGAACTGTGGTTT...ATTACTATTCCTCCCAGCACCCCGGCAGTTCCACAGGCTCCCGTCCAGGGGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
ENST00000675037.1
CDS-3UTR TCA 90 bp TCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCAGGCTACCTTCTTCCCAGTaGGGACAGCCACACCACCAT +
Preference number: 4 (lower is better)
Translates to: SESISRPPVLANSTLGSRLPSSQ*GQPHHH
Trigger: ATGGTGGTGTGGCTGTCCTCACTGGGAAGAAGGTAG...CCTGGAGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674957.1
ENST00000674997.1
CDS-3UTR TCA 90 bp GTGGTTTTGTGTACGCGTGTCTGTGCCCGCCAGGAATTCCCTGATAAGATGGGACTACCTTCTTCCCAGTaGGGACAGCCACACCACCAT +
Preference number: 4 (lower is better)
Translates to: VVLCTRVCARQEFPDKMGLPSSQ*GQPHHH
Trigger: ATGGTGGTGTGGCTGTCCTCACTGGGAAGAAGGTAG...TCCCATCTTATCAGGGAATTCCTGGCGGGCACAGACACGCGTACACAAAACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675050.1
CDS-3UTR TCA 90 bp CTCACATCCAGCTGTACTACCTTCTTCCCAGTGAGGACAGCCACACCACCATTCCTACCTTCTTCCCAGTaGGGACAGCCACACCACCAT +
Preference number: 4 (lower is better)
Translates to: LTSSCTTFFPVRTATPPFLPSSQ*GQPHHH
Trigger: ATGGTGGTGTGGCTGTCCTCACTGGGAAGAAGGTAG...GAATGGTGGTGTGGCTGTCCTCACTGGGAAGAAGGTAGTACAGCTGGATGTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527892.5
ENST00000674555.1
ENST00000674997.1
ENST00000675774.1
ENST00000676144.1
CDS-3UTR TCA 90 bp CGTAGAACCAGCCAGGCAGGGGAACGTCATCACTGGCTTGGGCTGAGTGTATCTTCGGATACCAGTTCCTaGCTGCTCTGTGGCAGATTT +
Preference number: 4 (lower is better)
Translates to: RRTSQAGERHHWLGLSVSSDTSS*LLCGRF
Trigger: AAATCTGCCACAGAGCAGTCAGGAACTGGTATCCGA...AGATACACTCAGCCCAAGCCAGTGATGACGTTCCCCTGCCTGGCTGGTTCTACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675050.1
CDS-3UTR TCA 90 bp TTTCACCATGTTGTCTCTCACATCCAGCTGTACTACCTTCTTCCCAGTGAGGACGGCAGGAGAATGGCCTaGACCCGGGAAGCGGAGCTT +
Preference number: 4 (lower is better)
Translates to: FHHVVSHIQLYYLLPSEDGRRMA*TREAEL
Trigger: AAGCTCCGCTTCCCGGGTTCAGGCCATTCTCCTGCC...GTCCTCACTGGGAAGAAGGTAGTACAGCTGGATGTGAGAGACAACATGGTGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675774.1
CDS-3UTR GCA 90 bp ATCCTCTTTCATAGTCTTGTAGGCATAATAAACTCCTGCCCCAGTGACTGTTGCGGGAGCCGGTTCCTCTaGCTCGGGCTTCGGACGCAC +
Preference number: 4 (lower is better)
Translates to: ILFHSLVGIINSCPSDCCGSRFL*LGLRTH
Trigger: GTGCGTCCGAAGCCCGAGGCAGAGGAACCGGCTCCC...GCAACAGTCACTGGGGCAGGAGTTTATTATGCCTACAAGACTATGAAAGAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529877.1
CDS-3UTR GCA 90 bp TCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCAGGCTCCAGGCCCACAGCTaGCACTATGTGGTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: SESISRPPVLANSTLGSRLQAHS*HYVVSF
Trigger: GAAACTGACCACATAGTGGCAGCTGTGGGCCTGGAG...CCTGGAGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
CDS-3UTR GCA 90 bp CACATCCAGCTGTACTACCTTCTTCCCAGTGAGGACAGCCACACCACCATTCTCGCATGCAGCATCTCCTaGCACCCAGATGTTAGAGCG +
Preference number: 4 (lower is better)
Translates to: HIQLYYLLPSEDSHTTILACSIS*HPDVRA
Trigger: CGCTCTAACATCTGGGTGGCAGGAGATGCTGCATGC...GAGAATGGTGGTGTGGCTGTCCTCACTGGGAAGAAGGTAGTACAGCTGGATGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527892.5
ENST00000674555.1
ENST00000674997.1
CDS-3UTR GCA 90 bp GTGGTTTTGTGTACGCGTGTCTGTGCCCGCCAGGAATTCCCTGATAAGATGGGAGCATGCAGCATCTCCTaGCACCCAGATGTTAGAGCG +
Preference number: 4 (lower is better)
Translates to: VVLCTRVCARQEFPDKMGACSIS*HPDVRA
Trigger: CGCTCTAACATCTGGGTGGCAGGAGATGCTGCATGC...TCCCATCTTATCAGGGAATTCCTGGCGGGCACAGACACGCGTACACAAAACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675050.1
CDS-3UTR GCA 90 bp CTGCTTCCAGGAAGTCATGGGCTAGCAGGGAGACACATACACAAGGATGAGGCTGCCCTTTCTGTCCCCTaGAGGACCCAATCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: LLPGSHGLAGRHIHKDEAALSVP*RTQSSS
Trigger: AGAACTGGATTGGGTCCTGCAGGGGACAGAAAGGGC...AGCCTCATCCTTGTGTATGTGTCTCCCTGCTAGCCCATGACTTCCTGGAAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
CDS-3UTR GCA 90 bp GTGGTTTTGTGTACGCGTGTCTGTGCCCGCCAGGAATTCCCTGATAAGATGGGAGCAGAACTTCCCCTCTaGCCAGAAAGCAAGGCACTG +
Preference number: 4 (lower is better)
Translates to: VVLCTRVCARQEFPDKMGAELPL*PESKAL
Trigger: CAGTGCCTTGCTTTCTGGGCAGAGGGGAAGTTCTGC...TCCCATCTTATCAGGGAATTCCTGGCGGGCACAGACACGCGTACACAAAACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675050.1
CDS-3UTR CCA 90 bp CACCATGTTGTCTCTCACATCCAGCTGTACTACCTTCTTCCCAGTGAGGACAGCGATCCCGAGCCCGGATaGATCTGGCTGCAGCAAAAG +
Preference number: 4 (lower is better)
Translates to: HHVVSHIQLYYLLPSEDSDPEPG*IWLQQK
Trigger: CTTTTGCTGCAGCCAGATCCATCCGGGCTCGGGATC...GCTGTCCTCACTGGGAAGAAGGTAGTACAGCTGGATGTGAGAGACAACATGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527892.5
ENST00000674555.1
ENST00000674997.1
ENST00000675774.1
ENST00000676144.1
CDS-3UTR CCA 90 bp GATGTCTGGCATGAGGACAGCAGGCAGAAGAGTCAAGAGATGATGGTCCTTCCAATACAATCAGTACCCTaGCCCCAGGATCCCGAGCCC +
Preference number: 4 (lower is better)
Translates to: DVWHEDSRQKSQEMMVLPIQSVP*PQDPEP
Trigger: GGGCTCGGGATCCTGGGGCCAGGGTACTGATTGTAT...TGGAAGGACCATCATCTCTTGACTCTTCTGCCTGCTGTCCTCATGCCAGACATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
CDS-3UTR CCA 90 bp CACATCCAGCTGTACTACCTTCTTCCCAGTGAGGACAGCCACACCACCATTCTCCCAGGCCACCAGTCTTaGCCAACTCAACATTGGGCT +
Preference number: 4 (lower is better)
Translates to: HIQLYYLLPSEDSHTTILPGHQS*PTQHWA
Trigger: AGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGG...GAGAATGGTGGTGTGGCTGTCCTCACTGGGAAGAAGGTAGTACAGCTGGATGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527892.5
ENST00000674555.1
ENST00000674997.1
CDS-3UTR CCA 90 bp GCAGGTGTGTGCAAAGAGGTCTGGAGGGGTGAGGGAAGTTCGGAAATGAAAGGAATGAGACTGCACAACTaGGAGCCGGTTCCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: AGVCKEVWRGEGSSEMKGMRLHN*EPVPLP
Trigger: AGGCAGAGGAACCGGCTCCCAGTTGTGCAGTCTCAT...TCCTTTCATTTCCGAACTTCCCTCACCCCTCCAGACCTCTTTGCACACACCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676229.1
CDS-3UTR CCA 90 bp GTGGTTTTGTGTACGCGTGTCTGTGCCCGCCAGGAATTCCCTGATAAGATGGGAGTGCCTGGCTTTAGGTaGAGTCAGGGAAGGACGTAC +
Preference number: 4 (lower is better)
Translates to: VVLCTRVCARQEFPDKMGVPGFR*SQGRTY
Trigger: GTACGTCCTTCCCTGACTCCACCTAAAGCCAGGCAC...TCCCATCTTATCAGGGAATTCCTGGCGGGCACAGACACGCGTACACAAAACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675050.1
CDS-3UTR TCA 90 bp CTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCAGGCTTCTCGGGGAAGAGTTaGATCACTTCTGTGCCCAAG +
Preference number: 4 (lower is better)
Translates to: LSLFPGHQSWPTQHWAPGFSGKS*ITSVPK
Trigger: CTTGGGCACAGAAGTGATTCAACTCTTCCCCGAGAA...GCCTGGAGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
CDS-3UTR TCA 90 bp CTGCCCAGAAAGCAAGGCACTGGGAGCGAGTCCCAACAATCTCTAGGGCAGCAAATCACTCCAGAACATTaGCTGATGCCAGTACGGCTT +
Preference number: 4 (lower is better)
Translates to: LPRKQGTGSESQQSLGQQITPEH*LMPVRL
Trigger: AAGCCGTACTGGCATCAGTCAATGTTCTGGAGTGAT...TTGCTGCCCTAGAGATTGTTGGGACTCGCTCCCAGTGCCTTGCTTTCTGGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675050.1
CDS-3UTR TCA 90 bp GCAGGTGTGTGCAAAGAGGTCTGGAGGGGTGAGGGAAGTTCGGAAATGAAAGGAAGAGGTCTGGAGGGGTaGGGGAAGTTCGGAAATGAA +
Preference number: 4 (lower is better)
Translates to: AGVCKEVWRGEGSSEMKGRGLEG*GKFGNE
Trigger: TTCATTTCCGAACTTCCCTCACCCCTCCAGACCTCT...TCCTTTCATTTCCGAACTTCCCTCACCCCTCCAGACCTCTTTGCACACACCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
CDS-3UTR TCA 90 bp ACAGCTTTTTGGTCACCAAGGGATCCCTCACCAGAACTAATCTCAGTGTTTAGCAAGCGGAGCTTGCAGTaGGCCGAGATCGCGCCACTG +
Preference number: 4 (lower is better)
Translates to: TAFWSPRDPSPELISVFSKRSLQ*AEIAPL
Trigger: CAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCTT...GCTAAACACTGAGATTAGTTCTGGTGAGGGATCCCTTGGTGACCAAAAAGCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675774.1
CDS-3UTR GCA 90 bp CTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCAGGCTCTACTCTTCACCTCTaGTCCAGCCCTATCAATGGC +
Preference number: 4 (lower is better)
Translates to: LSLFPGHQSWPTQHWAPGSTLHL*SSPING
Trigger: GCCATTGATAGGGCTGGAGCAGAGGTGAAGAGTAGA...GCCTGGAGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
CDS-3UTR GCA 90 bp CGAGTCCCAACAATCTCTAGGGCAGCAAGGGTGCCTGGCTTTAGGTGGAGTCAGCTGACTCCAACGGATTaGACAATAGCATTGGGCATC +
Preference number: 4 (lower is better)
Translates to: RVPTISRAARVPGFRWSQLTPTD*TIALGI
Trigger: GATGCCCAATGCTATTGTGCAATCCGTTGGAGTCAG...CTGACTCCACCTAAAGCCAGGCACCCTTGCTGCCCTAGAGATTGTTGGGACTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675050.1
CDS-3UTR GCA 90 bp TCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCAGGCCCACAATACCAGTTCCTGACTaGTCTGTGGCAGATTTGGGG +
Preference number: 4 (lower is better)
Translates to: SISRPPVLANSTLGSRPTIPVPD*SVADLG
Trigger: CCCCAAATCTGCCACAGAGCAGTCAGGAACTGGTAT...TGTGGGCCTGGAGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
CDS-3UTR GCA 90 bp CCAAAATCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCGGGCTGCAGTGGGTTTaGCAATTCCACTGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: PKSESISRPPVLANSTLGGLQWV*QFHCGA
Trigger: AGCCCCACAGTGGAATTGGCAAACCCACTGCAGCCC...GCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGATTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
CDS-3UTR GCA 90 bp CCAAAATCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCCCTCCTCTCAGGGGCTaGAGTGGGTTTGCCAATTCC +
Preference number: 4 (lower is better)
Translates to: PKSESISRPPVLANSTLGPPLRG*SGFANS
Trigger: GGAATTGGCAAACCCACTGCAGCCCCTGAGAGGAGG...GCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGATTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
CDS-3UTR GCA 90 bp GGGTGCCTGGCTTTAGGTGGAGTCAGGGAAGGACGTACAGAAGGGATATGGCAGAGTACACTAGGTTGCTaGCATCTTTCCCAGAAGCAC +
Preference number: 4 (lower is better)
Translates to: GCLALGGVREGRTEGIWQSTLGC*HLSQKH
Trigger: GTGCTTCTGGGAAAGATGGCAGCAACCTAGTGTACT...CTGCCATATCCCTTCTGTACGTCCTTCCCTGACTCCACCTAAAGCCAGGCACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675050.1
CDS-3UTR GCA 90 bp GCCACAGCAGGTGTGTGCAAAGAGGTCTGGAGGGGTGAGGGAAGTTCGGAAATGAGTACACTAGGTTGCTaGCATCTTTCCCAGAAGCAC +
Preference number: 4 (lower is better)
Translates to: ATAGVCKEVWRGEGSSEMSTLGC*HLSQKH
Trigger: GTGCTTCTGGGAAAGATGGCAGCAACCTAGTGTACT...CATTTCCGAACTTCCCTCACCCCTCCAGACCTCTTTGCACACACCTGCTGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676229.1
CDS-3UTR GCA 90 bp GATGATGGTCCTTCCATGAGTCCGTCTCCAGGTTTAACTGTGAAGCACCAGGTCCCACCTTCACCCACCTaGCCCCTTGACAAGAGAACA +
Preference number: 4 (lower is better)
Translates to: DDGPSMSPSPGLTVKHQVPPSPT*PLDKRT
Trigger: TGTTCTCTTGTCAAGGGGGCAGGTGGGTGAAGGTGG...GACCTGGTGCTTCACAGTTAAACCTGGAGACGGACTCATGGAAGGACCATCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
CDS-3UTR CCA 90 bp CCGTCTCCAGGTTTAACTGTGAAGCACCAGGTCTCTGAACTCAGATTTGTAGTACCTCCCAGCTCCGGGTaGGCATTGGACAGAGAAGCC +
Preference number: 4 (lower is better)
Translates to: PSPGLTVKHQVSELRFVVPPSSG*ALDREA
Trigger: GGCTTCTCTGTCCAATGCCCACCCGGAGCTGGGAGG...TACTACAAATCTGAGTTCAGAGACCTGGTGCTTCACAGTTAAACCTGGAGACGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676229.1
CDS-3UTR CCA 90 bp CTCCCTGTCCTCTTTGACCTAGTCACACCCATACGTAGAACCAGCCAGGCAGGGGAAAGGAACATGACTTaGCGCCTTGTCTTGAGGAAC +
Preference number: 4 (lower is better)
Translates to: LPVLFDLVTPIRRTSQAGERNMT*RLVLRN
Trigger: GTTCCTCAAGACAAGGCGCCAAGTCATGTTCCTTTC...CCCTGCCTGGCTGGTTCTACGTATGGGTGTGACTAGGTCAAAGAGGACAGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675050.1
CDS-3UTR CCA 90 bp CCAAAATCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCGAGCCCGGATGGATCTaGCTGCAGCAAAAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: PKSESISRPPVLANSTLGEPGWI*LQQKQL
Trigger: CAGCTGCTTTTGCTGCAGCCAGATCCATCCGGGCTC...GCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGATTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
CDS-3UTR CCA 90 bp AATCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCAGATCCCGAGCCCGGATaGATCTGGCTGCAGCAAAAG +
Preference number: 4 (lower is better)
Translates to: NLSLFPGHQSWPTQHWAPDPEPG*IWLQQK
Trigger: CTTTTGCTGCAGCCAGATCCATCCGGGCTCGGGATC...TGGAGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
CDS-3UTR CCA 90 bp CCAAAATCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCGATCCCGAGCCCGGATaGATCTGGCTGCAGCAAAAG +
Preference number: 4 (lower is better)
Translates to: PKSESISRPPVLANSTLGDPEPG*IWLQQK
Trigger: CTTTTGCTGCAGCCAGATCCATCCGGGCTCGGGATC...GCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGATTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
CDS-3UTR CCA 90 bp CCAAAATCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCATACAATCAGTACCCTaGCCCCAGGATCCCGAGCCC +
Preference number: 4 (lower is better)
Translates to: PKSESISRPPVLANSTLGIQSVP*PQDPEP
Trigger: GGGCTCGGGATCCTGGGGCCAGGGTACTGATTGTAT...GCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGATTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
CDS-3UTR CCA 90 bp CTCCCTGTCCTCTTTGACCTAGTCACACCCATACGTAGAACCAGCCAGGCAGGGTTCCTGACTGCTCTGTaGCAGATTTGGGGTTGTCTT +
Preference number: 4 (lower is better)
Translates to: LPVLFDLVTPIRRTSQAGFLTAL*QIWGCL
Trigger: AAGACAACCCCAAATCTGCCACAGAGCAGTCAGGAA...CCCTGCCTGGCTGGTTCTACGTATGGGTGTGACTAGGTCAAAGAGGACAGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675050.1
CDS-3UTR CCA 90 bp CTCACATCCAGCTGTACTACCTTCTTCCCAGTGAGGACAGCCACACCACCATTCTCTCAGGGGCTGCAGTaGGTTTGCCAATTCCACTGT +
Preference number: 4 (lower is better)
Translates to: LTSSCTTFFPVRTATPPFSQGLQ*VCQFHC
Trigger: ACAGTGGAATTGGCAAACCCACTGCAGCCCCTGAGA...GAATGGTGGTGTGGCTGTCCTCACTGGGAAGAAGGTAGTACAGCTGGATGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527892.5
ENST00000674555.1
ENST00000674997.1
CDS-3UTR TCA 90 bp TCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCAGGTTCTCGGGGAAGAGTTaGATCACTTCTGTGCCCAAG +
Preference number: 4 (lower is better)
Translates to: SESISRPPVLANSTLGSRFSGKS*ITSVPK
Trigger: CTTGGGCACAGAAGTGATTCAACTCTTCCCCGAGAA...CCTGGAGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
CDS-3UTR TCA 90 bp CTCACATCCAGCTGTACTACCTTCTTCCCAGTGAGGACAGCCACACCACCATTCTTCTCGGGGAAGAGTTaGATCACTTCTGTGCCCAAG +
Preference number: 4 (lower is better)
Translates to: LTSSCTTFFPVRTATPPFFSGKS*ITSVPK
Trigger: CTTGGGCACAGAAGTGATTCAACTCTTCCCCGAGAA...GAATGGTGGTGTGGCTGTCCTCACTGGGAAGAAGGTAGTACAGCTGGATGTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527892.5
ENST00000674555.1
ENST00000674997.1
ENST00000676144.1
CDS-3UTR TCA 90 bp AATCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCACCATGGTCCAGTTGCTaGGGTATTCGGGGAGGATCT +
Preference number: 4 (lower is better)
Translates to: NLSLFPGHQSWPTQHWAPPWSSC*GIRGGS
Trigger: AGATCCTCCCCGAATACCTCAGCAACTGGACCATGG...TGGAGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
CDS-3UTR TCA 90 bp GGTGCTGCAATTTGCTTGCTTTCTAATATGCGTGGCTTTCCACCTTCACCCACCCCATGGTCCAGTTGCTaGGGTATTCGGGGAGGATCT +
Preference number: 4 (lower is better)
Translates to: GAAICLLSNMRGFPPSPTPWSSC*GIRGGS
Trigger: AGATCCTCCCCGAATACCTCAGCAACTGGACCATGG...GGTGGGTGAAGGTGGAAAGCCACGCATATTAGAAAGCAAGCAAATTGCAGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
CDS-3UTR TCA 90 bp TCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCAGGTCGGATACCAGTTCCTaGCTGCTCTGTGGCAGATTT +
Preference number: 4 (lower is better)
Translates to: SESISRPPVLANSTLGSRSDTSS*LLCGRF
Trigger: AAATCTGCCACAGAGCAGTCAGGAACTGGTATCCGA...CCTGGAGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
CDS-3UTR TCA 90 bp CTAGTCACACCCATACGTAGAACCAGCCAGGCAGGGGAACGTCATCACTGGCTTAGGAATAGTAATTTCTaGGGCCTCGGACTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: LVTPIRRTSQAGERHHWLRNSNF*GLGLCL
Trigger: GAGACAGAGTCCGAGGCCTCAGAAATTACTATTCCT...AAGCCAGTGATGACGTTCCCCTGCCTGGCTGGTTCTACGTATGGGTGTGACTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675050.1
CDS-3UTR TCA 90 bp GTGGTTTTGTGTACGCGTGTCTGTGCCCGCCAGGAATTCCCTGATAAGATGGGAATCACTGGCTTGGGCTaGGTGTATCTGTGTGTGGTT +
Preference number: 4 (lower is better)
Translates to: VVLCTRVCARQEFPDKMGITGLG*VYLCVV
Trigger: AACCACACACAGATACACTCAGCCCAAGCCAGTGAT...TCCCATCTTATCAGGGAATTCCTGGCGGGCACAGACACGCGTACACAAAACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675050.1
CDS-3UTR TCA 90 bp GGTTGGGTCAGGGGATTTGGAGGAAGGTTTAAGGAAGTCAGGCTTTGTTCTGGACCTCCCTGTCCTCTTTaGCCTAGTCACACCCATACG +
Preference number: 4 (lower is better)
Translates to: GWVRGFGGRFKEVRLCSGPPCPL*PSHTHT
Trigger: CGTATGGGTGTGACTAGGTCAAAGAGGACAGGGAGG...TCCAGAACAAAGCCTGACTTCCTTAAACCTTCCTCCAAATCCCCTGACCCAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675050.1
CDS-3UTR GCA 90 bp CCAAAATCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCATCGCTGGAACAAGTTaGCTGGGAGCCGGTTCCTCT +
Preference number: 4 (lower is better)
Translates to: PKSESISRPPVLANSTLGIAGTS*LGAGSS
Trigger: AGAGGAACCGGCTCCCAGGCAACTTGTTCCAGCGAT...GCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGATTTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
CDS-3UTR GCA 90 bp CACATCCAGCTGTACTACCTTCTTCCCAGTGAGGACAGCCACACCACCATTCTCCAGCAAAAGCAGCTGTaGCTCCACCAATTAGCAGGA +
Preference number: 4 (lower is better)
Translates to: HIQLYYLLPSEDSHTTILQQKQL*LHQLAG
Trigger: TCCTGCTAATTGGTGGAGGCACAGCTGCTTTTGCTG...GAGAATGGTGGTGTGGCTGTCCTCACTGGGAAGAAGGTAGTACAGCTGGATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527892.5
ENST00000674555.1
ENST00000674997.1
ENST00000675774.1
ENST00000676144.1
CDS-3UTR GCA 90 bp GTCTTCAGAGATAGTGAACTTCCTGAGAGGAGAGGAGGGGAGTCAAGTGTTGTGCTCCAGGCCCACAGCTaGCACTATGTGGTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: VFRDSELPERRGGESSVVLQAHS*HYVVSF
Trigger: GAAACTGACCACATAGTGGCAGCTGTGGGCCTGGAG...CACAACACTTGACTCCCCTCCTCTCCTCTCAGGAAGTTCACTATCTCTGAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
CDS-3UTR GCA 90 bp GTCTTCAGAGATAGTGAACTTCCTGAGAGGAGAGGAGGGGAGTCAAGTGTTGTGGCATGCAGCATCTCCTaGCACCCAGATGTTAGAGCG +
Preference number: 4 (lower is better)
Translates to: VFRDSELPERRGGESSVVACSIS*HPDVRA
Trigger: CGCTCTAACATCTGGGTGGCAGGAGATGCTGCATGC...CACAACACTTGACTCCCCTCCTCTCCTCTCAGGAAGTTCACTATCTCTGAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
CDS-3UTR GCA 90 bp GCAGGTGTGTGCAAAGAGGTCTGGAGGGGTGAGGGAAGTTCGGAAATGAAAGGAATACCAGTTCCTGACTaGTCTGTGGCAGATTTGGGG +
Preference number: 4 (lower is better)
Translates to: AGVCKEVWRGEGSSEMKGIPVPD*SVADLG
Trigger: CCCCAAATCTGCCACAGAGCAGTCAGGAACTGGTAT...TCCTTTCATTTCCGAACTTCCCTCACCCCTCCAGACCTCTTTGCACACACCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
CDS-3UTR GCA 90 bp TTTCACCATGTTGTCTCTCACATCCAGCTGTACTACCTTCTTCCCAGTGAGGACGGGCTGCAGTGGGTTTaGCAATTCCACTGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: FHHVVSHIQLYYLLPSEDGLQWV*QFHCGA
Trigger: AGCCCCACAGTGGAATTGGCAAACCCACTGCAGCCC...GTCCTCACTGGGAAGAAGGTAGTACAGCTGGATGTGAGAGACAACATGGTGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527892.5
ENST00000674555.1
ENST00000674997.1
CDS-3UTR GCA 90 bp CCACCCATGCAGTCACCTAAGGCTTACATAAGTGCTTTGCAACCTCTGAATAGGCCTCCTCTCAGGGGCTaGAGTGGGTTTGCCAATTCC +
Preference number: 4 (lower is better)
Translates to: PPMQSPKAYISALQPLNRPPLRG*SGFANS
Trigger: GGAATTGGCAAACCCACTGCAGCCCCTGAGAGGAGG...CCTATTCAGAGGTTGCAAAGCACTTATGTAAGCCTTAGGTGACTGCATGGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527892.5
ENST00000535724.6
CDS-3UTR GCA 90 bp CAGCAGGCAGAAGAGTCAAGAGATGATGGTCCTTCCATGAGTCCGTCTCCAGGTGGCATAATAAACTCCTaGCCCAGTGACTGTTGCTCC +
Preference number: 4 (lower is better)
Translates to: QQAEESRDDGPSMSPSPGGIINS*PSDCCS
Trigger: GGAGCAACAGTCACTGGGGCAGGAGTTTATTATGCC...ACCTGGAGACGGACTCATGGAAGGACCATCATCTCTTGACTCTTCTGCCTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676229.1
CDS-3UTR GCA 90 bp GGTGCTGCAATTTGCTTGCTTTCTAATATGCGTGGCTTTCCACCTTCACCCACCCCACCTTCACCCACCTaGCCCCTTGACAAGAGAACA +
Preference number: 4 (lower is better)
Translates to: GAAICLLSNMRGFPPSPTPPSPT*PLDKRT
Trigger: TGTTCTCTTGTCAAGGGGGCAGGTGGGTGAAGGTGG...GGTGGGTGAAGGTGGAAAGCCACGCATATTAGAAAGCAAGCAAATTGCAGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
CDS-3UTR GCA 90 bp TATGCCATGCTTCAGGAAGAGGGCGCTAGAAAAGACTTAGAGGATTCAGGTTGGCTAGGGCAGCAAGGGTaGCTGGCTTTAGGTGGAGTC +
Preference number: 4 (lower is better)
Translates to: YAMLQEEGARKDLEDSGWLGQQG*LALGGV
Trigger: GACTCCACCTAAAGCCAGGCACCCTTGCTGCCCTAG...CCAACCTGAATCCTCTAAGTCTTTTCTAGCGCCCTCTTCCTGAAGCATGGCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675050.1
CDS-3UTR GCA 90 bp CTCCCTGTCCTCTTTGACCTAGTCACACCCATACGTAGAACCAGCCAGGCAGGGAGAGACGCCAGAGGCTaGTTTTCTTTCAGCAAATGT +
Preference number: 4 (lower is better)
Translates to: LPVLFDLVTPIRRTSQAGRDARG*FSFSKC
Trigger: ACATTTGCTGAAAGAAAAGCAGCCTCTGGCGTCTCT...CCCTGCCTGGCTGGTTCTACGTATGGGTGTGACTAGGTCAAAGAGGACAGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675050.1
CDS-3UTR CCA 90 bp CCAAAATCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCGGAACATGCCATCGCTaGAACAAGTTGCCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: PKSESISRPPVLANSTLGGTCHR*NKLPGS
Trigger: GCTCCCAGGCAACTTGTTCCAGCGATGGCATGTTCC...GCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGATTTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
CDS-3UTR CCA 90 bp CTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCAGGCGAAAGGAACATGACTTaGCGCCTTGTCTTGAGGAAC +
Preference number: 4 (lower is better)
Translates to: LSLFPGHQSWPTQHWAPGERNMT*RLVLRN
Trigger: GTTCCTCAAGACAAGGCGCCAAGTCATGTTCCTTTC...GCCTGGAGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
CDS-3UTR CCA 90 bp ACTCCTGCCCCAGTGACTGTTGCTCCTACAATTAAGAAGTACACTAGGTTGCTGGAGCCCGGATGGATCTaGCTGCAGCAAAAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: TPAPVTVAPTIKKYTRLLEPGWI*LQQKQL
Trigger: CAGCTGCTTTTGCTGCAGCCAGATCCATCCGGGCTC...CAGCAACCTAGTGTACTTCTTAATTGTAGGAGCAACAGTCACTGGGGCAGGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529877.1
CDS-3UTR CCA 90 bp CAAAATCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTGAGCCCGGATGGATCTaGCTGCAGCAAAAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: QNLSLFPGHQSWPTQHWAEPGWI*LQQKQL
Trigger: CAGCTGCTTTTGCTGCAGCCAGATCCATCCGGGCTC...AGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGATTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
CDS-3UTR CCA 90 bp TTTCACCATGTTGTCTCTCACATCCAGCTGTACTACCTTCTTCCCAGTGAGGACGAGCCCGGATGGATCTaGCTGCAGCAAAAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: FHHVVSHIQLYYLLPSEDEPGWI*LQQKQL
Trigger: CAGCTGCTTTTGCTGCAGCCAGATCCATCCGGGCTC...GTCCTCACTGGGAAGAAGGTAGTACAGCTGGATGTGAGAGACAACATGGTGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527892.5
ENST00000674555.1
ENST00000674997.1
ENST00000675774.1
ENST00000676144.1
CDS-3UTR CCA 90 bp ACTCCTGCCCCAGTGACTGTTGCTCCTACAATTAAGAAGTACACTAGGTTGCTGGATCCCGAGCCCGGATaGATCTGGCTGCAGCAAAAG +
Preference number: 4 (lower is better)
Translates to: TPAPVTVAPTIKKYTRLLDPEPG*IWLQQK
Trigger: CTTTTGCTGCAGCCAGATCCATCCGGGCTCGGGATC...CAGCAACCTAGTGTACTTCTTAATTGTAGGAGCAACAGTCACTGGGGCAGGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529877.1
CDS-3UTR CCA 90 bp CCACCCATGCAGTCACCTAAGGCTTACATAAGTGCTTTGCAACCTCTGAATAGGATACAATCAGTACCCTaGCCCCAGGATCCCGAGCCC +
Preference number: 4 (lower is better)
Translates to: PPMQSPKAYISALQPLNRIQSVP*PQDPEP
Trigger: GGGCTCGGGATCCTGGGGCCAGGGTACTGATTGTAT...CCTATTCAGAGGTTGCAAAGCACTTATGTAAGCCTTAGGTGACTGCATGGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527892.5
ENST00000535724.6
CDS-3UTR CCA 90 bp TTTCACCATGTTGTCTCTCACATCCAGCTGTACTACCTTCTTCCCAGTGAGGACATACAATCAGTACCCTaGCCCCAGGATCCCGAGCCC +
Preference number: 4 (lower is better)
Translates to: FHHVVSHIQLYYLLPSEDIQSVP*PQDPEP
Trigger: GGGCTCGGGATCCTGGGGCCAGGGTACTGATTGTAT...GTCCTCACTGGGAAGAAGGTAGTACAGCTGGATGTGAGAGACAACATGGTGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527892.5
ENST00000674555.1
ENST00000674997.1
ENST00000675774.1
ENST00000676144.1
CDS-3UTR CCA 90 bp TATGCCATGCTTCAGGAAGAGGGCGCTAGAAAAGACTTAGAGGATTCAGGTTGGTGGCCAACTCAACATTaGGCTCCAGGCCCACAGCTG +
Preference number: 4 (lower is better)
Translates to: YAMLQEEGARKDLEDSGWWPTQH*APGPQL
Trigger: CAGCTGTGGGCCTGGAGCCCAATGTTGAGTTGGCCA...CCAACCTGAATCCTCTAAGTCTTTTCTAGCGCCCTCTTCCTGAAGCATGGCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675050.1
CDS-3UTR CCA 90 bp GATGATGGTCCTTCCATGAGTCCGTCTCCAGGTTTAACTGTGAAGCACCAGGTCTCTCAGGGGCTGCAGTaGGTTTGCCAATTCCACTGT +
Preference number: 4 (lower is better)
Translates to: DDGPSMSPSPGLTVKHQVSQGLQ*VCQFHC
Trigger: ACAGTGGAATTGGCAAACCCACTGCAGCCCCTGAGA...GACCTGGTGCTTCACAGTTAAACCTGGAGACGGACTCATGGAAGGACCATCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
CDS-3UTR CCA 90 bp CTGCTTCCAGGAAGTCATGGGCTAGCAGGGAGACACATACACAAGGATGAGGCTCACAAGGATGAGGCTTaGAAGGCTGGGAAAGTCTTC +
Preference number: 4 (lower is better)
Translates to: LLPGSHGLAGRHIHKDEAHKDEA*KAGKVF
Trigger: GAAGACTTTCCCAGCCTTCCAAGCCTCATCCTTGTG...AGCCTCATCCTTGTGTATGTGTCTCCCTGCTAGCCCATGACTTCCTGGAAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
CDS-3UTR CCA 90 bp CGAGTCCCAACAATCTCTAGGGCAGCAAGGGTGCCTGGCTTTAGGTGGAGTCAGAATTCCCTGATAAGATaGGAAAGAGACCAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: RVPTISRAARVPGFRWSQNSLIR*ERDQRQ
Trigger: CTGCCTCTGGTCTCTTTCCCATCTTATCAGGGAATT...CTGACTCCACCTAAAGCCAGGCACCCTTGCTGCCCTAGAGATTGTTGGGACTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675050.1
CDS-3UTR CCA 90 bp CACATCCAGCTGTACTACCTTCTTCCCAGTGAGGACAGCCACACCACCATTCTCAAAATTAGCCAGGCGTaGTTACAGGCGCCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: HIQLYYLLPSEDSHTTILKISQA*LQAPVV
Trigger: GACTACAGGCGCCTGTAACCACGCCTGGCTAATTTT...GAGAATGGTGGTGTGGCTGTCCTCACTGGGAAGAAGGTAGTACAGCTGGATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675774.1
CDS-3UTR CCA 90 bp CTCACATCCAGCTGTACTACCTTCTTCCCAGTGAGGACAGCCACACCACCATTCCAGGTGACAGCTTTTTaGTCACCAAGGGATCCCTCA +
Preference number: 4 (lower is better)
Translates to: LTSSCTTFFPVRTATPPFQVTAF*SPRDPS
Trigger: TGAGGGATCCCTTGGTGACCAAAAAGCTGTCACCTG...GAATGGTGGTGTGGCTGTCCTCACTGGGAAGAAGGTAGTACAGCTGGATGTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675774.1
CDS-3UTR TCA 90 bp GGTGAACTCTGTGCACTTCCACCCATGCAGTCACCTAAGGCTTACATAAGTGCTCTTGGCGCCTTGTCTTaGGGAACTTCCTCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: GELCALPPMQSPKAYISALGALS*GTSSPS
Trigger: AGAAGGAGAGGAAGTTCCTCAAGACAAGGCGCCAAG...AGCACTTATGTAAGCCTTAGGTGACTGCATGGGTGGAAGTGCACAGAGTTCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527892.5
ENST00000535724.6
CDS-3UTR TCA 90 bp CAGATTAAGCTTCAGATGGTGAACTCTGTGCACTTCCACCCATGCAGTCACCTACTACCTTCTTCCCAGTaGGGACAGCCACACCACCAT +
Preference number: 4 (lower is better)
Translates to: QIKLQMVNSVHFHPCSHLLPSSQ*GQPHHH
Trigger: ATGGTGGTGTGGCTGTCCTCACTGGGAAGAAGGTAG...TAGGTGACTGCATGGGTGGAAGTGCACAGAGTTCACCATCTGAAGCTTAATCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527892.5
ENST00000535724.6
CDS-3UTR TCA 90 bp CAAAATCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCTACCTTCTTCCCAGTaGGGACAGCCACACCACCAT +
Preference number: 4 (lower is better)
Translates to: QNLSLFPGHQSWPTQHWALPSSQ*GQPHHH
Trigger: ATGGTGGTGTGGCTGTCCTCACTGGGAAGAAGGTAG...AGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGATTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674957.1
ENST00000674997.1
CDS-3UTR TCA 90 bp TTTCACCATGTTGTCTCTCACATCCAGCTGTACTACCTTCTTCCCAGTGAGGACCTACCTTCTTCCCAGTaGGGACAGCCACACCACCAT +
Preference number: 4 (lower is better)
Translates to: FHHVVSHIQLYYLLPSEDLPSSQ*GQPHHH
Trigger: ATGGTGGTGTGGCTGTCCTCACTGGGAAGAAGGTAG...GTCCTCACTGGGAAGAAGGTAGTACAGCTGGATGTGAGAGACAACATGGTGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527892.5
ENST00000674555.1
ENST00000674997.1
ENST00000675774.1
ENST00000676144.1
CDS-3UTR TCA 90 bp GATGTCTGGCATGAGGACAGCAGGCAGAAGAGTCAAGAGATGATGGTCCTTCCATTCTCGGGGAAGAGTTaGATCACTTCTGTGCCCAAG +
Preference number: 4 (lower is better)
Translates to: DVWHEDSRQKSQEMMVLPFSGKS*ITSVPK
Trigger: CTTGGGCACAGAAGTGATTCAACTCTTCCCCGAGAA...TGGAAGGACCATCATCTCTTGACTCTTCTGCCTGCTGTCCTCATGCCAGACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
CDS-3UTR TCA 90 bp TCAAGAGATGATGGTCCTTCCATGAGTCCGTCTCCAGGTTTAACTGTGAAGCACCCATGGTCCAGTTGCTaGGGTATTCGGGGAGGATCT +
Preference number: 4 (lower is better)
Translates to: SRDDGPSMSPSPGLTVKHPWSSC*GIRGGS
Trigger: AGATCCTCCCCGAATACCTCAGCAACTGGACCATGG...GTGCTTCACAGTTAAACCTGGAGACGGACTCATGGAAGGACCATCATCTCTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
CDS-3UTR TCA 90 bp CAAAATCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCATGGTCCAGTTGCTaGGGTATTCGGGGAGGATCT +
Preference number: 4 (lower is better)
Translates to: QNLSLFPGHQSWPTQHWAPWSSC*GIRGGS
Trigger: AGATCCTCCCCGAATACCTCAGCAACTGGACCATGG...AGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGATTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
CDS-3UTR TCA 90 bp TCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCAGGATCACTCCAGAACATTaGCTGATGCCAGTACGGCTT +
Preference number: 4 (lower is better)
Translates to: SESISRPPVLANSTLGSRITPEH*LMPVRL
Trigger: AAGCCGTACTGGCATCAGTCAATGTTCTGGAGTGAT...CCTGGAGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
CDS-3UTR TCA 90 bp CTCACATCCAGCTGTACTACCTTCTTCCCAGTGAGGACAGCCACACCACCATTCATCACTCCAGAACATTaGCTGATGCCAGTACGGCTT +
Preference number: 4 (lower is better)
Translates to: LTSSCTTFFPVRTATPPFITPEH*LMPVRL
Trigger: AAGCCGTACTGGCATCAGTCAATGTTCTGGAGTGAT...GAATGGTGGTGTGGCTGTCCTCACTGGGAAGAAGGTAGTACAGCTGGATGTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527892.5
ENST00000674555.1
ENST00000674997.1
CDS-3UTR TCA 90 bp GATGATGGTCCTTCCATGAGTCCGTCTCCAGGTTTAACTGTGAAGCACCAGGTCTCGGATACCAGTTCCTaGCTGCTCTGTGGCAGATTT +
Preference number: 4 (lower is better)
Translates to: DDGPSMSPSPGLTVKHQVSDTSS*LLCGRF
Trigger: AAATCTGCCACAGAGCAGTCAGGAACTGGTATCCGA...GACCTGGTGCTTCACAGTTAAACCTGGAGACGGACTCATGGAAGGACCATCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
CDS-3UTR TCA 90 bp TCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCAGGCCCACAGTTTGGCTACTTCATTaGGATCTTCATGCTGCTCAC +
Preference number: 4 (lower is better)
Translates to: SISRPPVLANSTLGSRPTVWLLH*DLHAAH
Trigger: GTGAGCAGCATGAAGATCTCAATGAAGTAGCCAAAC...TGTGGGCCTGGAGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
CDS-3UTR TCA 90 bp GCAGGTGTGTGCAAAGAGGTCTGGAGGGGTGAGGGAAGTTCGGAAATGAAAGGAAGAAGAGTCAAGAGATaGTGGTCCTTCCATGAGTCC +
Preference number: 4 (lower is better)
Translates to: AGVCKEVWRGEGSSEMKGRRVKR*WSFHES
Trigger: GGACTCATGGAAGGACCATCATCTCTTGACTCTTCT...TCCTTTCATTTCCGAACTTCCCTCACCCCTCCAGACCTCTTTGCACACACCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
CDS-3UTR TCA 90 bp GGCCTGTTCTCCCAGTGTTCAGAAGGGATTTGGTTGAAGCTGAAACTGCCCTTAGGCAGCAGAATCACTTaGATCCGGGAGGTAGAGGTT +
Preference number: 4 (lower is better)
Translates to: GLFSQCSEGIWLKLKLPLGSRIT*IREVEV
Trigger: AACCTCTACCTCCCGGATTCAAGTGATTCTGCTGCC...TAAGGGCAGTTTCAGCTTCAACCAAATCCCTTCTGAACACTGGGAGAACAGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676229.1
CDS-3UTR TCA 90 bp CGAGTCCCAACAATCTCTAGGGCAGCAAGGGTGCCTGGCTTTAGGTGGAGTCAGTTGTCTGTGTTCACATaGTTATGGAGCGGTCTTGTT +
Preference number: 4 (lower is better)
Translates to: RVPTISRAARVPGFRWSQLSVFT*LWSGLV
Trigger: AACAAGACCGCTCCATAATCATGTGAACACAGACAA...CTGACTCCACCTAAAGCCAGGCACCCTTGCTGCCCTAGAGATTGTTGGGACTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675050.1
CDS-3UTR GCA 90 bp TTTCACCATGTTGTCTCTCACATCCAGCTGTACTACCTTCTTCCCAGTGAGGACATCGCTGGAACAAGTTaGCTGGGAGCCGGTTCCTCT +
Preference number: 4 (lower is better)
Translates to: FHHVVSHIQLYYLLPSEDIAGTS*LGAGSS
Trigger: AGAGGAACCGGCTCCCAGGCAACTTGTTCCAGCGAT...GTCCTCACTGGGAAGAAGGTAGTACAGCTGGATGTGAGAGACAACATGGTGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674555.1
CDS-3UTR GCA 90 bp CACCATGTTGTCTCTCACATCCAGCTGTACTACCTTCTTCCCAGTGAGGACAGCTCTACTCTTCACCTCTaGTCCAGCCCTATCAATGGC +
Preference number: 4 (lower is better)
Translates to: HHVVSHIQLYYLLPSEDSSTLHL*SSPING
Trigger: GCCATTGATAGGGCTGGAGCAGAGGTGAAGAGTAGA...GCTGTCCTCACTGGGAAGAAGGTAGTACAGCTGGATGTGAGAGACAACATGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527892.5
ENST00000674555.1
ENST00000674997.1
ENST00000675774.1
ENST00000676144.1
CDS-3UTR GCA 90 bp CACATCCAGCTGTACTACCTTCTTCCCAGTGAGGACAGCCACACCACCATTCTCCTGACTCCAACGGATTaGACAATAGCATTGGGCATC +
Preference number: 4 (lower is better)
Translates to: HIQLYYLLPSEDSHTTILLTPTD*TIALGI
Trigger: GATGCCCAATGCTATTGTGCAATCCGTTGGAGTCAG...GAGAATGGTGGTGTGGCTGTCCTCACTGGGAAGAAGGTAGTACAGCTGGATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527892.5
ENST00000674555.1
ENST00000674997.1
ENST00000676144.1
CDS-3UTR GCA 90 bp TCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCAGGCTGACTCCAACGGATTaGACAATAGCATTGGGCATC +
Preference number: 4 (lower is better)
Translates to: SESISRPPVLANSTLGSRLTPTD*TIALGI
Trigger: GATGCCCAATGCTATTGTGCAATCCGTTGGAGTCAG...CCTGGAGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
CDS-3UTR GCA 90 bp CTGCTTCCAGGAAGTCATGGGCTAGCAGGGAGACACATACACAAGGATGAGGCTCTGACTCCAACGGATTaGACAATAGCATTGGGCATC +
Preference number: 4 (lower is better)
Translates to: LLPGSHGLAGRHIHKDEALTPTD*TIALGI
Trigger: GATGCCCAATGCTATTGTGCAATCCGTTGGAGTCAG...AGCCTCATCCTTGTGTATGTGTCTCCCTGCTAGCCCATGACTTCCTGGAAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
CDS-3UTR GCA 90 bp CAAAATCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCTCCAGGCCCACAGCTaGCACTATGTGGTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: QNLSLFPGHQSWPTQHWALQAHS*HYVVSF
Trigger: GAAACTGACCACATAGTGGCAGCTGTGGGCCTGGAG...AGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGATTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
CDS-3UTR GCA 90 bp TATGCCATGCTTCAGGAAGAGGGCGCTAGAAAAGACTTAGAGGATTCAGGTTGGCTCCAGGCCCACAGCTaGCACTATGTGGTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: YAMLQEEGARKDLEDSGWLQAHS*HYVVSF
Trigger: GAAACTGACCACATAGTGGCAGCTGTGGGCCTGGAG...CCAACCTGAATCCTCTAAGTCTTTTCTAGCGCCCTCTTCCTGAAGCATGGCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675050.1
CDS-3UTR GCA 90 bp CTGCCCAGAAAGCAAGGCACTGGGAGCGAGTCCCAACAATCTCTAGGGCAGCAATTGAGATCTTCATGCTaGTCACCGTCCTTAATGATC +
Preference number: 4 (lower is better)
Translates to: LPRKQGTGSESQQSLGQQLRSSC*SPSLMI
Trigger: GATCATTAAGGACGGTGAGCAGCATGAAGATCTCAA...TTGCTGCCCTAGAGATTGTTGGGACTCGCTCCCAGTGCCTTGCTTTCTGGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675050.1
CDS-3UTR GCA 90 bp CCGTCTCCAGGTTTAACTGTGAAGCACCAGGTCTCTGAACTCAGATTTGTAGTAGGGCTGCAGTGGGTTTaGCAATTCCACTGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: PSPGLTVKHQVSELRFVVGLQWV*QFHCGA
Trigger: AGCCCCACAGTGGAATTGGCAAACCCACTGCAGCCC...TACTACAAATCTGAGTTCAGAGACCTGGTGCTTCACAGTTAAACCTGGAGACGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
CDS-3UTR GCA 90 bp GATGTCTGGCATGAGGACAGCAGGCAGAAGAGTCAAGAGATGATGGTCCTTCCACCTGTGCTTGGTCGGTaGTGCAATTTGCTTGCTTTC +
Preference number: 4 (lower is better)
Translates to: DVWHEDSRQKSQEMMVLPPVLGR*CNLLAF
Trigger: GAAAGCAAGCAAATTGCAGCACCGACCAAGCACAGG...TGGAAGGACCATCATCTCTTGACTCTTCTGCCTGCTGTCCTCATGCCAGACATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
CDS-3UTR CCA 90 bp ACCAACTGTGGGCAAACTACTGTCCACAAGACCAATAGCTTCATAGCCAACATCCTGGAACAAGTTGCCTaGGAGCCGGTTCCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: TNCGQTTVHKTNSFIANILEQVA*EPVPLP
Trigger: AGGCAGAGGAACCGGCTCCCAGGCAACTTGTTCCAG...GATGTTGGCTATGAAGCTATTGGTCTTGTGGACAGTAGTTTGCCCACAGTTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416073.7
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000675037.1
CDS-3UTR CCA 90 bp TCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCAGGGAAAGGAACATGACTTaGCGCCTTGTCTTGAGGAAC +
Preference number: 4 (lower is better)
Translates to: SESISRPPVLANSTLGSRERNMT*RLVLRN
Trigger: GTTCCTCAAGACAAGGCGCCAAGTCATGTTCCTTTC...CCTGGAGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
CDS-3UTR CCA 90 bp AACACCAACTGTGGGCAAACTACTGTCCACAAGACCAATAGCTTCATAGCCAACGAGCCCGGATGGATCTaGCTGCAGCAAAAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: NTNCGQTTVHKTNSFIANEPGWI*LQQKQL
Trigger: CAGCTGCTTTTGCTGCAGCCAGATCCATCCGGGCTC...GTTGGCTATGAAGCTATTGGTCTTGTGGACAGTAGTTTGCCCACAGTTGGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
ENST00000675037.1
CDS-3UTR CCA 90 bp TACAACAGGTATCAGAACTGCTGGCCCCAGATTAAGCTTCAGATGGTGAACTCTGATCCCGAGCCCGGATaGATCTGGCTGCAGCAAAAG +
Preference number: 4 (lower is better)
Translates to: YNRYQNCWPQIKLQMVNSDPEPG*IWLQQK
Trigger: CTTTTGCTGCAGCCAGATCCATCCGGGCTCGGGATC...AGAGTTCACCATCTGAAGCTTAATCTGGGGCCAGCAGTTCTGATACCTGTTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527892.5
ENST00000535724.6
CDS-3UTR CCA 90 bp AACACCAACTGTGGGCAAACTACTGTCCACAAGACCAATAGCTTCATAGCCAACGATCCCGAGCCCGGATaGATCTGGCTGCAGCAAAAG +
Preference number: 4 (lower is better)
Translates to: NTNCGQTTVHKTNSFIANDPEPG*IWLQQK
Trigger: CTTTTGCTGCAGCCAGATCCATCCGGGCTCGGGATC...GTTGGCTATGAAGCTATTGGTCTTGTGGACAGTAGTTTGCCCACAGTTGGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
ENST00000675037.1
CDS-3UTR CCA 90 bp ACCAACTGTGGGCAAACTACTGTCCACAAGACCAATAGCTTCATAGCCAACATCATACAATCAGTACCCTaGCCCCAGGATCCCGAGCCC +
Preference number: 4 (lower is better)
Translates to: TNCGQTTVHKTNSFIANIIQSVP*PQDPEP
Trigger: GGGCTCGGGATCCTGGGGCCAGGGTACTGATTGTAT...GATGTTGGCTATGAAGCTATTGGTCTTGTGGACAGTAGTTTGCCCACAGTTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
ENST00000675037.1
CDS-3UTR CCA 90 bp ACCAACTGTGGGCAAACTACTGTCCACAAGACCAATAGCTTCATAGCCAACATCTGGCCAACTCAACATTaGGCTCCAGGCCCACAGCTG +
Preference number: 4 (lower is better)
Translates to: TNCGQTTVHKTNSFIANIWPTQH*APGPQL
Trigger: CAGCTGTGGGCCTGGAGCCCAATGTTGAGTTGGCCA...GATGTTGGCTATGAAGCTATTGGTCTTGTGGACAGTAGTTTGCCCACAGTTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
ENST00000675037.1
CDS-3UTR CCA 90 bp CCAGGTTTAACTGTGAAGCACCAGGTCTCTGAACTCAGATTTGTAGTAAGTGCCTGGCCAACTCAACATTaGGCTCCAGGCCCACAGCTG +
Preference number: 4 (lower is better)
Translates to: PGLTVKHQVSELRFVVSAWPTQH*APGPQL
Trigger: CAGCTGTGGGCCTGGAGCCCAATGTTGAGTTGGCCA...GGCACTTACTACAAATCTGAGTTCAGAGACCTGGTGCTTCACAGTTAAACCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
CDS-3UTR CCA 90 bp TCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCAGGTTCCTGACTGCTCTGTaGCAGATTTGGGGTTGTCTT +
Preference number: 4 (lower is better)
Translates to: SESISRPPVLANSTLGSRFLTAL*QIWGCL
Trigger: AAGACAACCCCAAATCTGCCACAGAGCAGTCAGGAA...CCTGGAGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
CDS-3UTR CCA 90 bp CTGCTTCCAGGAAGTCATGGGCTAGCAGGGAGACACATACACAAGGATGAGGCTTTCCTGACTGCTCTGTaGCAGATTTGGGGTTGTCTT +
Preference number: 4 (lower is better)
Translates to: LLPGSHGLAGRHIHKDEAFLTAL*QIWGCL
Trigger: AAGACAACCCCAAATCTGCCACAGAGCAGTCAGGAA...AGCCTCATCCTTGTGTATGTGTCTCCCTGCTAGCCCATGACTTCCTGGAAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
CDS-3UTR CCA 90 bp AATCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCATCTCAGGGGCTGCAGTaGGTTTGCCAATTCCACTGT +
Preference number: 4 (lower is better)
Translates to: NLSLFPGHQSWPTQHWAPSQGLQ*VCQFHC
Trigger: ACAGTGGAATTGGCAAACCCACTGCAGCCCCTGAGA...TGGAGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
CDS-3UTR CCA 90 bp CCAAAATCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCTCAGGGGCTGCAGTaGGTTTGCCAATTCCACTGT +
Preference number: 4 (lower is better)
Translates to: PKSESISRPPVLANSTLGSQGLQ*VCQFHC
Trigger: ACAGTGGAATTGGCAAACCCACTGCAGCCCCTGAGA...GCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGATTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
CDS-3UTR CCA 90 bp TCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCAGGAGGTATCAGAACTGCTaGCCCCAGATTAAGCTTCAG +
Preference number: 4 (lower is better)
Translates to: SESISRPPVLANSTLGSRRYQNC*PQIKLQ
Trigger: CTGAAGCTTAATCTGGGGCCAGCAGTTCTGATACCT...CCTGGAGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527892.5
ENST00000535724.6
CDS-3UTR CCA 90 bp AATCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCAGCTTCCAGGAAGTCATaGGCTAGCAGGGAGACACAT +
Preference number: 4 (lower is better)
Translates to: NLSLFPGHQSWPTQHWAPASRKS*ASRETH
Trigger: ATGTGTCTCCCTGCTAGCCCATGACTTCCTGGAAGC...TGGAGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674957.1
CDS-3UTR CCA 90 bp GGTGCTGCAATTTGCTTGCTTTCTAATATGCGTGGCTTTCCACCTTCACCCACCGACCCAATCCAGTTCTaGGACAGGAGTTGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: GAAICLLSNMRGFPPSPTDPIQF*DRSCSR
Trigger: CCTGGAACAACTCCTGTCCCAGAACTGGATTGGGTC...GGTGGGTGAAGGTGGAAAGCCACGCATATTAGAAAGCAAGCAAATTGCAGCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
CDS-3UTR TCA 90 bp ACTCCTGCCCCAGTGACTGTTGCTCCTACAATTAAGAAGTACACTAGGTTGCTGCTTGGCGCCTTGTCTTaGGGAACTTCCTCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: TPAPVTVAPTIKKYTRLLLGALS*GTSSPS
Trigger: AGAAGGAGAGGAAGTTCCTCAAGACAAGGCGCCAAG...CAGCAACCTAGTGTACTTCTTAATTGTAGGAGCAACAGTCACTGGGGCAGGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529877.1
CDS-3UTR TCA 90 bp CTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCAGGCAAACCACAGTTCTTTTaGAAGAGGAGGTCGCATGTA +
Preference number: 4 (lower is better)
Translates to: LSLFPGHQSWPTQHWAPGKPQFF*KRRSHV
Trigger: TACATGCGACCTCCTCTTTCAAAAGAACTGTGGTTT...GCCTGGAGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
CDS-3UTR TCA 90 bp AACACCAACTGTGGGCAAACTACTGTCCACAAGACCAATAGCTTCATAGCCAACCTACCTTCTTCCCAGTaGGGACAGCCACACCACCAT +
Preference number: 4 (lower is better)
Translates to: NTNCGQTTVHKTNSFIANLPSSQ*GQPHHH
Trigger: ATGGTGGTGTGGCTGTCCTCACTGGGAAGAAGGTAG...GTTGGCTATGAAGCTATTGGTCTTGTGGACAGTAGTTTGCCCACAGTTGGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674957.1
ENST00000674997.1
ENST00000675037.1
CDS-3UTR TCA 90 bp AATCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCATTCTCGGGGAAGAGTTaGATCACTTCTGTGCCCAAG +
Preference number: 4 (lower is better)
Translates to: NLSLFPGHQSWPTQHWAPFSGKS*ITSVPK
Trigger: CTTGGGCACAGAAGTGATTCAACTCTTCCCCGAGAA...TGGAGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
CDS-3UTR TCA 90 bp ACCAACTGTGGGCAAACTACTGTCCACAAGACCAATAGCTTCATAGCCAACATCCCATGGTCCAGTTGCTaGGGTATTCGGGGAGGATCT +
Preference number: 4 (lower is better)
Translates to: TNCGQTTVHKTNSFIANIPWSSC*GIRGGS
Trigger: AGATCCTCCCCGAATACCTCAGCAACTGGACCATGG...GATGTTGGCTATGAAGCTATTGGTCTTGTGGACAGTAGTTTGCCCACAGTTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
ENST00000675037.1
CDS-3UTR TCA 90 bp CACCATGTTGTCTCTCACATCCAGCTGTACTACCTTCTTCCCAGTGAGGACAGCATCACTCCAGAACATTaGCTGATGCCAGTACGGCTT +
Preference number: 4 (lower is better)
Translates to: HHVVSHIQLYYLLPSEDSITPEH*LMPVRL
Trigger: AAGCCGTACTGGCATCAGTCAATGTTCTGGAGTGAT...GCTGTCCTCACTGGGAAGAAGGTAGTACAGCTGGATGTGAGAGACAACATGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527892.5
ENST00000674555.1
ENST00000674997.1
CDS-3UTR TCA 90 bp CACATCCAGCTGTACTACCTTCTTCCCAGTGAGGACAGCCACACCACCATTCTCGTTTGGCTACTTCATTaGGATCTTCATGCTGCTCAC +
Preference number: 4 (lower is better)
Translates to: HIQLYYLLPSEDSHTTILVWLLH*DLHAAH
Trigger: GTGAGCAGCATGAAGATCTCAATGAAGTAGCCAAAC...GAGAATGGTGGTGTGGCTGTCCTCACTGGGAAGAAGGTAGTACAGCTGGATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527892.5
ENST00000674555.1
ENST00000674997.1
CDS-3UTR TCA 90 bp CCAAAATCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCGTGCTTTGCAACCTCTaGATAGGAAGCATCCTCCTG +
Preference number: 4 (lower is better)
Translates to: PKSESISRPPVLANSTLGVLCNL*IGSILL
Trigger: CAGGAGGATGCTTCCTATTCAGAGGTTGCAAAGCAC...GCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGATTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527892.5
ENST00000535724.6
CDS-3UTR TCA 90 bp CAGCAGGCAGAAGAGTCAAGAGATGATGGTCCTTCCATGAGTCCGTCTCCAGGTGAAGCACCAGGTCTCTaGACTCAGATTTGTAGTAAG +
Preference number: 4 (lower is better)
Translates to: QQAEESRDDGPSMSPSPGEAPGL*TQICSK
Trigger: CTTACTACAAATCTGAGTTCAGAGACCTGGTGCTTC...ACCTGGAGACGGACTCATGGAAGGACCATCATCTCTTGACTCTTCTGCCTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
CDS-3UTR TCA 90 bp GAGGATTCAGGTTGGGTCAGGGGATTTGGAGGAAGGTTTAAGGAAGTCAGGCTTTGGACTGGATGCTGGTaGTTCTGTGATTGGATTGGG +
Preference number: 4 (lower is better)
Translates to: EDSGWVRGFGGRFKEVRLWTGCW*FCDWIG
Trigger: CCCAATCCAATCACAGAATCACCAGCATCCAGTCCA...AAGCCTGACTTCCTTAAACCTTCCTCCAAATCCCCTGACCCAACCTGAATCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675050.1
CDS-3UTR TCA 90 bp CACATCCAGCTGTACTACCTTCTTCCCAGTGAGGACAGCCACACCACCATTCTCGTTAAGTTGCTCAGGTaGCAGCTTTTTGGTCACCAA +
Preference number: 4 (lower is better)
Translates to: HIQLYYLLPSEDSHTTILVKLLR*QLFGHQ
Trigger: TTGGTGACCAAAAAGCTGTCACCTGAGCAACTTAAC...GAGAATGGTGGTGTGGCTGTCCTCACTGGGAAGAAGGTAGTACAGCTGGATGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675774.1
CDS-3UTR GCA 90 bp ACCAACTGTGGGCAAACTACTGTCCACAAGACCAATAGCTTCATAGCCAACATCATCGCTGGAACAAGTTaGCTGGGAGCCGGTTCCTCT +
Preference number: 4 (lower is better)
Translates to: TNCGQTTVHKTNSFIANIIAGTS*LGAGSS
Trigger: AGAGGAACCGGCTCCCAGGCAACTTGTTCCAGCGAT...GATGTTGGCTATGAAGCTATTGGTCTTGTGGACAGTAGTTTGCCCACAGTTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416073.7
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000675037.1
CDS-3UTR GCA 90 bp CCAAAATCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCCAGCAAAAGCAGCTGTaGCTCCACCAATTAGCAGGA +
Preference number: 4 (lower is better)
Translates to: PKSESISRPPVLANSTLGQQKQL*LHQLAG
Trigger: TCCTGCTAATTGGTGGAGGCACAGCTGCTTTTGCTG...GCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGATTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
CDS-3UTR GCA 90 bp GGCCTGTTCTCCCAGTGTTCAGAAGGGATTTGGTTGAAGCTGAAACTGCCCTTACAGCAAAAGCAGCTGTaGCTCCACCAATTAGCAGGA +
Preference number: 4 (lower is better)
Translates to: GLFSQCSEGIWLKLKLPLQQKQL*LHQLAG
Trigger: TCCTGCTAATTGGTGGAGGCACAGCTGCTTTTGCTG...TAAGGGCAGTTTCAGCTTCAACCAAATCCCTTCTGAACACTGGGAGAACAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676229.1
CDS-3UTR GCA 90 bp GAGGATTCAGGTTGGGTCAGGGGATTTGGAGGAAGGTTTAAGGAAGTCAGGCTTTCTACTCTTCACCTCTaGTCCAGCCCTATCAATGGC +
Preference number: 4 (lower is better)
Translates to: EDSGWVRGFGGRFKEVRLSTLHL*SSPING
Trigger: GCCATTGATAGGGCTGGAGCAGAGGTGAAGAGTAGA...AAGCCTGACTTCCTTAAACCTTCCTCCAAATCCCCTGACCCAACCTGAATCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675050.1
CDS-3UTR GCA 90 bp AACTGCTGGCCCCAGATTAAGCTTCAGATGGTGAACTCTGTGCACTTCCACCCACTGACTCCAACGGATTaGACAATAGCATTGGGCATC +
Preference number: 4 (lower is better)
Translates to: NCWPQIKLQMVNSVHFHPLTPTD*TIALGI
Trigger: GATGCCCAATGCTATTGTGCAATCCGTTGGAGTCAG...TGGGTGGAAGTGCACAGAGTTCACCATCTGAAGCTTAATCTGGGGCCAGCAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527892.5
ENST00000535724.6
CDS-3UTR GCA 90 bp CACCATGTTGTCTCTCACATCCAGCTGTACTACCTTCTTCCCAGTGAGGACAGCCTGACTCCAACGGATTaGACAATAGCATTGGGCATC +
Preference number: 4 (lower is better)
Translates to: HHVVSHIQLYYLLPSEDSLTPTD*TIALGI
Trigger: GATGCCCAATGCTATTGTGCAATCCGTTGGAGTCAG...GCTGTCCTCACTGGGAAGAAGGTAGTACAGCTGGATGTGAGAGACAACATGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527892.5
ENST00000674555.1
ENST00000674997.1
ENST00000676144.1
CDS-3UTR GCA 90 bp AATCACTTGAATCCGGGAGGTAGAGGTTGTGATGAGCCTAGGTCGCACCATTGCCTGACTCCAACGGATTaGACAATAGCATTGGGCATC +
Preference number: 4 (lower is better)
Translates to: NHLNPGGRGCDEPRSHHCLTPTD*TIALGI
Trigger: GATGCCCAATGCTATTGTGCAATCCGTTGGAGTCAG...GCAATGGTGCGACCTAGGCTCATCACAACCTCTACCTCCCGGATTCAAGTGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676229.1
CDS-3UTR GCA 90 bp AACACCAACTGTGGGCAAACTACTGTCCACAAGACCAATAGCTTCATAGCCAACCTCCAGGCCCACAGCTaGCACTATGTGGTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: NTNCGQTTVHKTNSFIANLQAHS*HYVVSF
Trigger: GAAACTGACCACATAGTGGCAGCTGTGGGCCTGGAG...GTTGGCTATGAAGCTATTGGTCTTGTGGACAGTAGTTTGCCCACAGTTGGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
ENST00000675037.1
CDS-3UTR GCA 90 bp AATCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCAATACCAGTTCCTGACTaGTCTGTGGCAGATTTGGGG +
Preference number: 4 (lower is better)
Translates to: NLSLFPGHQSWPTQHWAPIPVPD*SVADLG
Trigger: CCCCAAATCTGCCACAGAGCAGTCAGGAACTGGTAT...TGGAGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
CDS-3UTR GCA 90 bp AATCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCAGTGCACTTCCACCCATaGAGTCACCTAAGGCTTACA +
Preference number: 4 (lower is better)
Translates to: NLSLFPGHQSWPTQHWAPVHFHP*SHLRLT
Trigger: TGTAAGCCTTAGGTGACTGCATGGGTGGAAGTGCAC...TGGAGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527892.5
ENST00000535724.6
CDS-3UTR GCA 90 bp GTGGTTTTGTGTACGCGTGTCTGTGCCCGCCAGGAATTCCCTGATAAGATGGGAAGAAGTACACTAGGTTaGTGCCATCTTTCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: VVLCTRVCARQEFPDKMGRSTLG*CHLSQK
Trigger: CTTCTGGGAAAGATGGCAGCAACCTAGTGTACTTCT...TCCCATCTTATCAGGGAATTCCTGGCGGGCACAGACACGCGTACACAAAACCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675050.1
CDS-3UTR GCA 90 bp TCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCAGGCCCACAGTGCTGCAATTTGCTTaGTTTCTAATATGCGTGGCT +
Preference number: 4 (lower is better)
Translates to: SISRPPVLANSTLGSRPTVLQFA*FLICVA
Trigger: AGCCACGCATATTAGAAAGCAAGCAAATTGCAGCAC...TGTGGGCCTGGAGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674957.1
CDS-3UTR GCA 90 bp GATGATGGTCCTTCCATGAGTCCGTCTCCAGGTTTAACTGTGAAGCACCAGGTCCAGATTTGTAGTAAGTaGCCTTTCTGTCCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: DDGPSMSPSPGLTVKHQVQICSK*PFCPLQ
Trigger: CTGCAGGGGACAGAAAGGGCACTTACTACAAATCTG...GACCTGGTGCTTCACAGTTAAACCTGGAGACGGACTCATGGAAGGACCATCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
CDS-3UTR CCA 90 bp CATAGTCTTGTAGGCATAATAAACTCCTGCCCCAGTGACTGTTGCTCCTACAATCTGGAACAAGTTGCCTaGGAGCCGGTTCCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: HSLVGIINSCPSDCCSYNLEQVA*EPVPLP
Trigger: AGGCAGAGGAACCGGCTCCCAGGCAACTTGTTCCAG...ATTGTAGGAGCAACAGTCACTGGGGCAGGAGTTTATTATGCCTACAAGACTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529877.1
CDS-3UTR CCA 90 bp ATGTGGTCAGTTTCTACCTTCCTGCCGTCTTTCAGCTTGATAAGTAACTTGCCACTGGAACAAGTTGCCTaGGAGCCGGTTCCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: MWSVSTFLPSFSLISNLPLEQVA*EPVPLP
Trigger: AGGCAGAGGAACCGGCTCCCAGGCAACTTGTTCCAG...TGGCAAGTTACTTATCAAGCTGAAAGACGGCAGGAAGGTAGAAACTGACCACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
CDS-3UTR CCA 90 bp ACCAACTGTGGGCAAACTACTGTCCACAAGACCAATAGCTTCATAGCCAACATCGGAACATGCCATCGCTaGAACAAGTTGCCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: TNCGQTTVHKTNSFIANIGTCHR*NKLPGS
Trigger: GCTCCCAGGCAACTTGTTCCAGCGATGGCATGTTCC...GATGTTGGCTATGAAGCTATTGGTCTTGTGGACAGTAGTTTGCCCACAGTTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416073.7
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000675037.1
CDS-3UTR CCA 90 bp AACTGCTGGCCCCAGATTAAGCTTCAGATGGTGAACTCTGTGCACTTCCACCCAGAAAGGAACATGACTTaGCGCCTTGTCTTGAGGAAC +
Preference number: 4 (lower is better)
Translates to: NCWPQIKLQMVNSVHFHPERNMT*RLVLRN
Trigger: GTTCCTCAAGACAAGGCGCCAAGTCATGTTCCTTTC...TGGGTGGAAGTGCACAGAGTTCACCATCTGAAGCTTAATCTGGGGCCAGCAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527892.5
ENST00000535724.6
CDS-3UTR CCA 90 bp AATCACTTGAATCCGGGAGGTAGAGGTTGTGATGAGCCTAGGTCGCACCATTGCGAAAGGAACATGACTTaGCGCCTTGTCTTGAGGAAC +
Preference number: 4 (lower is better)
Translates to: NHLNPGGRGCDEPRSHHCERNMT*RLVLRN
Trigger: GTTCCTCAAGACAAGGCGCCAAGTCATGTTCCTTTC...GCAATGGTGCGACCTAGGCTCATCACAACCTCTACCTCCCGGATTCAAGTGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676229.1
CDS-3UTR CCA 90 bp CAGTCACCTAAGGCTTACATAAGTGCTTTGCAACCTCTGAATAGGAAGCATCCTGAGCCCGGATGGATCTaGCTGCAGCAAAAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: QSPKAYISALQPLNRKHPEPGWI*LQQKQL
Trigger: CAGCTGCTTTTGCTGCAGCCAGATCCATCCGGGCTC...AGGATGCTTCCTATTCAGAGGTTGCAAAGCACTTATGTAAGCCTTAGGTGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527892.5
ENST00000535724.6
CDS-3UTR CCA 90 bp ATCCTCTTTCATAGTCTTGTAGGCATAATAAACTCCTGCCCCAGTGACTGTTGCATACAATCAGTACCCTaGCCCCAGGATCCCGAGCCC +
Preference number: 4 (lower is better)
Translates to: ILFHSLVGIINSCPSDCCIQSVP*PQDPEP
Trigger: GGGCTCGGGATCCTGGGGCCAGGGTACTGATTGTAT...GCAACAGTCACTGGGGCAGGAGTTTATTATGCCTACAAGACTATGAAAGAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529877.1
CDS-3UTR CCA 90 bp CAGTCACCTAAGGCTTACATAAGTGCTTTGCAACCTCTGAATAGGAAGCATCCTTGGCCAACTCAACATTaGGCTCCAGGCCCACAGCTG +
Preference number: 4 (lower is better)
Translates to: QSPKAYISALQPLNRKHPWPTQH*APGPQL
Trigger: CAGCTGTGGGCCTGGAGCCCAATGTTGAGTTGGCCA...AGGATGCTTCCTATTCAGAGGTTGCAAAGCACTTATGTAAGCCTTAGGTGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527892.5
ENST00000535724.6
CDS-3UTR CCA 90 bp ATGTGGTCAGTTTCTACCTTCCTGCCGTCTTTCAGCTTGATAAGTAACTTGCCATGGCCAACTCAACATTaGGCTCCAGGCCCACAGCTG +
Preference number: 4 (lower is better)
Translates to: MWSVSTFLPSFSLISNLPWPTQH*APGPQL
Trigger: CAGCTGTGGGCCTGGAGCCCAATGTTGAGTTGGCCA...TGGCAAGTTACTTATCAAGCTGAAAGACGGCAGGAAGGTAGAAACTGACCACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674997.1
CDS-3UTR CCA 90 bp AACACCAACTGTGGGCAAACTACTGTCCACAAGACCAATAGCTTCATAGCCAACCCAGGCCACCAGTCTTaGCCAACTCAACATTGGGCT +
Preference number: 4 (lower is better)
Translates to: NTNCGQTTVHKTNSFIANPGHQS*PTQHWA
Trigger: AGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGG...GTTGGCTATGAAGCTATTGGTCTTGTGGACAGTAGTTTGCCCACAGTTGGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
ENST00000675037.1
CDS-3UTR CCA 90 bp ACCAACTGTGGGCAAACTACTGTCCACAAGACCAATAGCTTCATAGCCAACATCCCAGGCCACCAGTCTTaGCCAACTCAACATTGGGCT +
Preference number: 4 (lower is better)
Translates to: TNCGQTTVHKTNSFIANIPGHQS*PTQHWA
Trigger: AGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGG...GATGTTGGCTATGAAGCTATTGGTCTTGTGGACAGTAGTTTGCCCACAGTTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
ENST00000675037.1
CDS-3UTR CCA 90 bp GCAGGTGTGTGCAAAGAGGTCTGGAGGGGTGAGGGAAGTTCGGAAATGAAAGGATTGCCAATTCCACTGTaGGGCTTCAGTCTTCATGAA +
Preference number: 4 (lower is better)
Translates to: AGVCKEVWRGEGSSEMKGLPIPL*GFSLHE
Trigger: TTCATGAAGACTGAAGCCCCACAGTGGAATTGGCAA...TCCTTTCATTTCCGAACTTCCCTCACCCCTCCAGACCTCTTTGCACACACCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
CDS-3UTR CCA 90 bp CTGCTTCCAGGAAGTCATGGGCTAGCAGGGAGACACATACACAAGGATGAGGCTTTGCCAATTCCACTGTaGGGCTTCAGTCTTCATGAA +
Preference number: 4 (lower is better)
Translates to: LLPGSHGLAGRHIHKDEALPIPL*GFSLHE
Trigger: TTCATGAAGACTGAAGCCCCACAGTGGAATTGGCAA...AGCCTCATCCTTGTGTATGTGTCTCCCTGCTAGCCCATGACTTCCTGGAAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
CDS-3UTR CCA 90 bp TCAAGAGATGATGGTCCTTCCATGAGTCCGTCTCCAGGTTTAACTGTGAAGCACGCTTCCAGGAAGTCATaGGCTAGCAGGGAGACACAT +
Preference number: 4 (lower is better)
Translates to: SRDDGPSMSPSPGLTVKHASRKS*ASRETH
Trigger: ATGTGTCTCCCTGCTAGCCCATGACTTCCTGGAAGC...GTGCTTCACAGTTAAACCTGGAGACGGACTCATGGAAGGACCATCATCTCTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
CDS-3UTR CCA 90 bp TATGCCATGCTTCAGGAAGAGGGCGCTAGAAAAGACTTAGAGGATTCAGGTTGGGGGGAACGTCATCACTaGCTTGGGCTGAGTGTATCT +
Preference number: 4 (lower is better)
Translates to: YAMLQEEGARKDLEDSGWGERHH*LGLSVS
Trigger: AGATACACTCAGCCCAAGCCAGTGATGACGTTCCCC...CCAACCTGAATCCTCTAAGTCTTTTCTAGCGCCCTCTTCCTGAAGCATGGCATA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000675050.1
CDS-3UTR CCA 90 bp CCAAAATCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCACAGCTGCCACTATGTaGTCAGTTTCTTCCTGCCGT +
Preference number: 4 (lower is better)
Translates to: PKSESISRPPVLANSTLGTAATM*SVSSCR
Trigger: ACGGCAGGAAGAAACTGACCACATAGTGGCAGCTGT...GCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGATTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674957.1
CDS-3UTR TCA 90 bp TACAACAGGTATCAGAACTGCTGGCCCCAGATTAAGCTTCAGATGGTGAACTCTCTTGGCGCCTTGTCTTaGGGAACTTCCTCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: YNRYQNCWPQIKLQMVNSLGALS*GTSSPS
Trigger: AGAAGGAGAGGAAGTTCCTCAAGACAAGGCGCCAAG...AGAGTTCACCATCTGAAGCTTAATCTGGGGCCAGCAGTTCTGATACCTGTTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527892.5
ENST00000535724.6
CDS-3UTR TCA 90 bp CACATCCAGCTGTACTACCTTCTTCCCAGTGAGGACAGCCACACCACCATTCTCAAACCACAGTTCTTTTaGAAGAGGAGGTCGCATGTA +
Preference number: 4 (lower is better)
Translates to: HIQLYYLLPSEDSHTTILKPQFF*KRRSHV
Trigger: TACATGCGACCTCCTCTTTCAAAAGAACTGTGGTTT...GAGAATGGTGGTGTGGCTGTCCTCACTGGGAAGAAGGTAGTACAGCTGGATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527892.5
ENST00000674555.1
ENST00000674997.1
ENST00000675774.1
ENST00000676144.1
CDS-3UTR TCA 90 bp TTTCACCATGTTGTCTCTCACATCCAGCTGTACTACCTTCTTCCCAGTGAGGACTTCTCGGGGAAGAGTTaGATCACTTCTGTGCCCAAG +
Preference number: 4 (lower is better)
Translates to: FHHVVSHIQLYYLLPSEDFSGKS*ITSVPK
Trigger: CTTGGGCACAGAAGTGATTCAACTCTTCCCCGAGAA...GTCCTCACTGGGAAGAAGGTAGTACAGCTGGATGTGAGAGACAACATGGTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527892.5
ENST00000674555.1
ENST00000674997.1
ENST00000676144.1
CDS-3UTR TCA 90 bp CCAAAATCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCATCACTCCAGAACATTaGCTGATGCCAGTACGGCTT +
Preference number: 4 (lower is better)
Translates to: PKSESISRPPVLANSTLGITPEH*LMPVRL
Trigger: AAGCCGTACTGGCATCAGTCAATGTTCTGGAGTGAT...GCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGATTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
CDS-3UTR TCA 90 bp GGCCTGTTCTCCCAGTGTTCAGAAGGGATTTGGTTGAAGCTGAAACTGCCCTTAATCACTCCAGAACATTaGCTGATGCCAGTACGGCTT +
Preference number: 4 (lower is better)
Translates to: GLFSQCSEGIWLKLKLPLITPEH*LMPVRL
Trigger: AAGCCGTACTGGCATCAGTCAATGTTCTGGAGTGAT...TAAGGGCAGTTTCAGCTTCAACCAAATCCCTTCTGAACACTGGGAGAACAGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676229.1
CDS-3UTR TCA 90 bp AATCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCAAGGAATAGTAATTTCTaGGGCCTCGGACTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: NLSLFPGHQSWPTQHWAPRNSNF*GLGLCL
Trigger: GAGACAGAGTCCGAGGCCTCAGAAATTACTATTCCT...TGGAGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
CDS-3UTR TCA 90 bp CCAAAATCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCAGGAATAGTAATTTCTaGGGCCTCGGACTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: PKSESISRPPVLANSTLGRNSNF*GLGLCL
Trigger: GAGACAGAGTCCGAGGCCTCAGAAATTACTATTCCT...GCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGATTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
CDS-3UTR TCA 90 bp CACCATGTTGTCTCTCACATCCAGCTGTACTACCTTCTTCCCAGTGAGGACAGCGTTTGGCTACTTCATTaGGATCTTCATGCTGCTCAC +
Preference number: 4 (lower is better)
Translates to: HHVVSHIQLYYLLPSEDSVWLLH*DLHAAH
Trigger: GTGAGCAGCATGAAGATCTCAATGAAGTAGCCAAAC...GCTGTCCTCACTGGGAAGAAGGTAGTACAGCTGGATGTGAGAGACAACATGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527892.5
ENST00000674555.1
ENST00000674997.1
CDS-3UTR TCA 90 bp GATGTCTGGCATGAGGACAGCAGGCAGAAGAGTCAAGAGATGATGGTCCTTCCAGAAGCACCAGGTCTCTaGACTCAGATTTGTAGTAAG +
Preference number: 4 (lower is better)
Translates to: DVWHEDSRQKSQEMMVLPEAPGL*TQICSK
Trigger: CTTACTACAAATCTGAGTTCAGAGACCTGGTGCTTC...TGGAAGGACCATCATCTCTTGACTCTTCTGCCTGCTGTCCTCATGCCAGACATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
CDS-3UTR TCA 90 bp GTGGTTTTGTGTACGCGTGTCTGTGCCCGCCAGGAATTCCCTGATAAGATGGGAAATGCTGATGCCCTATaGATGTATGTTCAGCAGAAC +
Preference number: 4 (lower is better)
Translates to: VVLCTRVCARQEFPDKMGNADAL*MYVQQN
Trigger: GTTCTGCTGAACATACATTCATAGGGCATCAGCATT...TCCCATCTTATCAGGGAATTCCTGGCGGGCACAGACACGCGTACACAAAACCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675050.1
CDS-3UTR TCA 90 bp CTCACATCCAGCTGTACTACCTTCTTCCCAGTGAGGACAGCCACACCACCATTCACAGAACAGACTGGATaGATCTTCTTGAAGTCTCAG +
Preference number: 4 (lower is better)
Translates to: LTSSCTTFFPVRTATPPFTEQTG*IFLKSQ
Trigger: CTGAGACTTCAAGAAGATTCATCCAGTCTGTTCTGT...GAATGGTGGTGTGGCTGTCCTCACTGGGAAGAAGGTAGTACAGCTGGATGTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675774.1
ENST00000676144.1
CDS-3UTR TCA 90 bp ACCAACTGTGGGCAAACTACTGTCCACAAGACCAATAGCTTCATAGCCAACATCAATCACTCAACAGCGTaGTCATGGTGCTCTACCCGC +
Preference number: 4 (lower is better)
Translates to: TNCGQTTVHKTNSFIANINHSTA*SWCSTR
Trigger: GCGGGTAGAGCACCATGATCACGCTGTTGAGTGATT...GATGTTGGCTATGAAGCTATTGGTCTTGTGGACAGTAGTTTGCCCACAGTTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675037.1
CDS-3UTR TCA 90 bp ATGTGGTCAGTTTCTACCTTCCTGCCGTCTTTCAGCTTGATAAGTAACTTGCCAAAACTCCTGCCCCAGTaGCTGTTGCTCATAGGCACC +
Preference number: 4 (lower is better)
Translates to: MWSVSTFLPSFSLISNLPKLLPQ*LLLIGT
Trigger: GGTGCCTATGAGCAACAGTCACTGGGGCAGGAGTTT...TGGCAAGTTACTTATCAAGCTGAAAGACGGCAGGAAGGTAGAAACTGACCACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674555.1
CDS-3UTR GCA 90 bp ATCCTCTTTCATAGTCTTGTAGGCATAATAAACTCCTGCCCCAGTGACTGTTGCATCGCTGGAACAAGTTaGCTGGGAGCCGGTTCCTCT +
Preference number: 4 (lower is better)
Translates to: ILFHSLVGIINSCPSDCCIAGTS*LGAGSS
Trigger: AGAGGAACCGGCTCCCAGGCAACTTGTTCCAGCGAT...GCAACAGTCACTGGGGCAGGAGTTTATTATGCCTACAAGACTATGAAAGAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529877.1
CDS-3UTR GCA 90 bp ATGTGGTCAGTTTCTACCTTCCTGCCGTCTTTCAGCTTGATAAGTAACTTGCCAATCGCTGGAACAAGTTaGCTGGGAGCCGGTTCCTCT +
Preference number: 4 (lower is better)
Translates to: MWSVSTFLPSFSLISNLPIAGTS*LGAGSS
Trigger: AGAGGAACCGGCTCCCAGGCAACTTGTTCCAGCGAT...TGGCAAGTTACTTATCAAGCTGAAAGACGGCAGGAAGGTAGAAACTGACCACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
CDS-3UTR GCA 90 bp CCACCCATGCAGTCACCTAAGGCTTACATAAGTGCTTTGCAACCTCTGAATAGGCAGCAAAAGCAGCTGTaGCTCCACCAATTAGCAGGA +
Preference number: 4 (lower is better)
Translates to: PPMQSPKAYISALQPLNRQQKQL*LHQLAG
Trigger: TCCTGCTAATTGGTGGAGGCACAGCTGCTTTTGCTG...CCTATTCAGAGGTTGCAAAGCACTTATGTAAGCCTTAGGTGACTGCATGGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527892.5
ENST00000535724.6
CDS-3UTR GCA 90 bp GCCCCAGTGACTGTTGCTCCTACAATTAAGAAGTACACTAGGTTGCTGCCATCTCAGCAAAAGCAGCTGTaGCTCCACCAATTAGCAGGA +
Preference number: 4 (lower is better)
Translates to: APVTVAPTIKKYTRLLPSQQKQL*LHQLAG
Trigger: TCCTGCTAATTGGTGGAGGCACAGCTGCTTTTGCTG...AGATGGCAGCAACCTAGTGTACTTCTTAATTGTAGGAGCAACAGTCACTGGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529877.1
CDS-3UTR GCA 90 bp TTTCACCATGTTGTCTCTCACATCCAGCTGTACTACCTTCTTCCCAGTGAGGACCAGCAAAAGCAGCTGTaGCTCCACCAATTAGCAGGA +
Preference number: 4 (lower is better)
Translates to: FHHVVSHIQLYYLLPSEDQQKQL*LHQLAG
Trigger: TCCTGCTAATTGGTGGAGGCACAGCTGCTTTTGCTG...GTCCTCACTGGGAAGAAGGTAGTACAGCTGGATGTGAGAGACAACATGGTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527892.5
ENST00000674555.1
ENST00000674997.1
ENST00000675774.1
ENST00000676144.1
CDS-3UTR GCA 90 bp CAAAATCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTTCTACTCTTCACCTCTaGTCCAGCCCTATCAATGGC +
Preference number: 4 (lower is better)
Translates to: QNLSLFPGHQSWPTQHWASTLHL*SSPING
Trigger: GCCATTGATAGGGCTGGAGCAGAGGTGAAGAGTAGA...AGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGATTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
CDS-3UTR GCA 90 bp TCAAGAGATGATGGTCCTTCCATGAGTCCGTCTCCAGGTTTAACTGTGAAGCACTCTACTCTTCACCTCTaGTCCAGCCCTATCAATGGC +
Preference number: 4 (lower is better)
Translates to: SRDDGPSMSPSPGLTVKHSTLHL*SSPING
Trigger: GCCATTGATAGGGCTGGAGCAGAGGTGAAGAGTAGA...GTGCTTCACAGTTAAACCTGGAGACGGACTCATGGAAGGACCATCATCTCTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
CDS-3UTR GCA 90 bp ATGTGGTCAGTTTCTACCTTCCTGCCGTCTTTCAGCTTGATAAGTAACTTGCCAGCATGCAGCATCTCCTaGCACCCAGATGTTAGAGCG +
Preference number: 4 (lower is better)
Translates to: MWSVSTFLPSFSLISNLPACSIS*HPDVRA
Trigger: CGCTCTAACATCTGGGTGGCAGGAGATGCTGCATGC...TGGCAAGTTACTTATCAAGCTGAAAGACGGCAGGAAGGTAGAAACTGACCACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674997.1
CDS-3UTR GCA 90 bp CAAAATCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTATACCAGTTCCTGACTaGTCTGTGGCAGATTTGGGG +
Preference number: 4 (lower is better)
Translates to: QNLSLFPGHQSWPTQHWAIPVPD*SVADLG
Trigger: CCCCAAATCTGCCACAGAGCAGTCAGGAACTGGTAT...AGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGATTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
CDS-3UTR GCA 90 bp TCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCAGGTTGAGATCTTCATGCTaGTCACCGTCCTTAATGATC +
Preference number: 4 (lower is better)
Translates to: SESISRPPVLANSTLGSRLRSSC*SPSLMI
Trigger: GATCATTAAGGACGGTGAGCAGCATGAAGATCTCAA...CCTGGAGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
CDS-3UTR GCA 90 bp GATGATGGTCCTTCCATGAGTCCGTCTCCAGGTTTAACTGTGAAGCACCAGGTCGCTTGCTTTCTAATATaGGTGGCTTTCCACCTTCAC +
Preference number: 4 (lower is better)
Translates to: DDGPSMSPSPGLTVKHQVACFLI*VAFHLH
Trigger: GTGAAGGTGGAAAGCCACGCATATTAGAAAGCAAGC...GACCTGGTGCTTCACAGTTAAACCTGGAGACGGACTCATGGAAGGACCATCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
CDS-3UTR GCA 90 bp AATCACTTGAATCCGGGAGGTAGAGGTTGTGATGAGCCTAGGTCGCACCATTGCGCTTGCTTTCTAATATaGGTGGCTTTCCACCTTCAC +
Preference number: 4 (lower is better)
Translates to: NHLNPGGRGCDEPRSHHCACFLI*VAFHLH
Trigger: GTGAAGGTGGAAAGCCACGCATATTAGAAAGCAAGC...GCAATGGTGCGACCTAGGCTCATCACAACCTCTACCTCCCGGATTCAAGTGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676229.1
CDS-3UTR GCA 90 bp GATGATGGTCCTTCCATGAGTCCGTCTCCAGGTTTAACTGTGAAGCACCAGGTCCTGAGAAAAATCCTGTaGTTGGTCGGTGCTGCAATT +
Preference number: 4 (lower is better)
Translates to: DDGPSMSPSPGLTVKHQVLRKIL*LVGAAI
Trigger: AATTGCAGCACCGACCAAGCACAGGATTTTTCTCAG...GACCTGGTGCTTCACAGTTAAACCTGGAGACGGACTCATGGAAGGACCATCATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
CDS-3UTR GCA 90 bp AATCACTTGAATCCGGGAGGTAGAGGTTGTGATGAGCCTAGGTCGCACCATTGCCTGAGAAAAATCCTGTaGTTGGTCGGTGCTGCAATT +
Preference number: 4 (lower is better)
Translates to: NHLNPGGRGCDEPRSHHCLRKIL*LVGAAI
Trigger: AATTGCAGCACCGACCAAGCACAGGATTTTTCTCAG...GCAATGGTGCGACCTAGGCTCATCACAACCTCTACCTCCCGGATTCAAGTGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676229.1
CDS-3UTR GCA 90 bp CCAAAATCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCCAGATTTGTAGTAAGTaGCCTTTCTGTCCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: PKSESISRPPVLANSTLGQICSK*PFCPLQ
Trigger: CTGCAGGGGACAGAAAGGGCACTTACTACAAATCTG...GCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGATTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674957.1
CDS-3UTR GCA 90 bp CTGCTTCCAGGAAGTCATGGGCTAGCAGGGAGACACATACACAAGGATGAGGCTTCGGTATACCTGTACTaGAAATTCTTACGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: LLPGSHGLAGRHIHKDEASVYLY*KFLRWR
Trigger: TCTCCACCGTAAGAATTTGCAGTACAGGTATACCGA...AGCCTCATCCTTGTGTATGTGTCTCCCTGCTAGCCCATGACTTCCTGGAAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676229.1
CDS-3UTR CCA 90 bp CCAGTGACTGTTGCTCCTACAATTAAGAAGTACACTAGGTTGCTGCCATCTTTCGGAACATGCCATCGCTaGAACAAGTTGCCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: PVTVAPTIKKYTRLLPSFGTCHR*NKLPGS
Trigger: GCTCCCAGGCAACTTGTTCCAGCGATGGCATGTTCC...GAAAGATGGCAGCAACCTAGTGTACTTCTTAATTGTAGGAGCAACAGTCACTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529877.1
CDS-3UTR CCA 90 bp CAGTCACCTAAGGCTTACATAAGTGCTTTGCAACCTCTGAATAGGAAGCATCCTGGAACATGCCATCGCTaGAACAAGTTGCCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: QSPKAYISALQPLNRKHPGTCHR*NKLPGS
Trigger: GCTCCCAGGCAACTTGTTCCAGCGATGGCATGTTCC...AGGATGCTTCCTATTCAGAGGTTGCAAAGCACTTATGTAAGCCTTAGGTGACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535724.6
CDS-3UTR CCA 90 bp CAGTCACCTAAGGCTTACATAAGTGCTTTGCAACCTCTGAATAGGAAGCATCCTCCAGGCCACCAGTCTTaGCCAACTCAACATTGGGCT +
Preference number: 4 (lower is better)
Translates to: QSPKAYISALQPLNRKHPPGHQS*PTQHWA
Trigger: AGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGG...AGGATGCTTCCTATTCAGAGGTTGCAAAGCACTTATGTAAGCCTTAGGTGACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527892.5
ENST00000535724.6
CDS-3UTR CCA 90 bp AACACCAACTGTGGGCAAACTACTGTCCACAAGACCAATAGCTTCATAGCCAACTCTCAGGGGCTGCAGTaGGTTTGCCAATTCCACTGT +
Preference number: 4 (lower is better)
Translates to: NTNCGQTTVHKTNSFIANSQGLQ*VCQFHC
Trigger: ACAGTGGAATTGGCAAACCCACTGCAGCCCCTGAGA...GTTGGCTATGAAGCTATTGGTCTTGTGGACAGTAGTTTGCCCACAGTTGGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
ENST00000675037.1
CDS-3UTR CCA 90 bp ATTCAGGTTGGGTCAGGGGATTTGGAGGAAGGTTTAAGGAAGTCAGGCTTTGTTTCTCAGGGGCTGCAGTaGGTTTGCCAATTCCACTGT +
Preference number: 4 (lower is better)
Translates to: IQVGSGDLEEGLRKSGFVSQGLQ*VCQFHC
Trigger: ACAGTGGAATTGGCAAACCCACTGCAGCCCCTGAGA...AACAAAGCCTGACTTCCTTAAACCTTCCTCCAAATCCCCTGACCCAACCTGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675050.1
CDS-3UTR CCA 90 bp AGCTTCCAGAGACGCCAGAGGCTGCTTTTCTTTCAGCAAATGTTCATTTTGAGAATGAGACTGCACAACTaGGAGCCGGTTCCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: SFQRRQRLLFFQQMFILRMRLHN*EPVPLP
Trigger: AGGCAGAGGAACCGGCTCCCAGTTGTGCAGTCTCAT...TCTCAAAATGAACATTTGCTGAAAGAAAAGCAGCCTCTGGCGTCTCTGGAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675050.1
CDS-3UTR CCA 90 bp AACACCAACTGTGGGCAAACTACTGTCCACAAGACCAATAGCTTCATAGCCAACGACCCAATCCAGTTCTaGGACAGGAGTTGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: NTNCGQTTVHKTNSFIANDPIQF*DRSCSR
Trigger: CCTGGAACAACTCCTGTCCCAGAACTGGATTGGGTC...GTTGGCTATGAAGCTATTGGTCTTGTGGACAGTAGTTTGCCCACAGTTGGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674957.1
CDS-3UTR TCA 90 bp AACACCAACTGTGGGCAAACTACTGTCCACAAGACCAATAGCTTCATAGCCAACTTCTCGGGGAAGAGTTaGATCACTTCTGTGCCCAAG +
Preference number: 4 (lower is better)
Translates to: NTNCGQTTVHKTNSFIANFSGKS*ITSVPK
Trigger: CTTGGGCACAGAAGTGATTCAACTCTTCCCCGAGAA...GTTGGCTATGAAGCTATTGGTCTTGTGGACAGTAGTTTGCCCACAGTTGGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
ENST00000675037.1
CDS-3UTR TCA 90 bp ACCAACTGTGGGCAAACTACTGTCCACAAGACCAATAGCTTCATAGCCAACATCTCGGATACCAGTTCCTaGCTGCTCTGTGGCAGATTT +
Preference number: 4 (lower is better)
Translates to: TNCGQTTVHKTNSFIANISDTSS*LLCGRF
Trigger: AAATCTGCCACAGAGCAGTCAGGAACTGGTATCCGA...GATGTTGGCTATGAAGCTATTGGTCTTGTGGACAGTAGTTTGCCCACAGTTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
ENST00000675037.1
CDS-3UTR TCA 90 bp TTTCACCATGTTGTCTCTCACATCCAGCTGTACTACCTTCTTCCCAGTGAGGACAGGAATAGTAATTTCTaGGGCCTCGGACTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: FHHVVSHIQLYYLLPSEDRNSNF*GLGLCL
Trigger: GAGACAGAGTCCGAGGCCTCAGAAATTACTATTCCT...GTCCTCACTGGGAAGAAGGTAGTACAGCTGGATGTGAGAGACAACATGGTGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527892.5
ENST00000674555.1
ENST00000674997.1
CDS-3UTR TCA 90 bp TCAAGAGATGATGGTCCTTCCATGAGTCCGTCTCCAGGTTTAACTGTGAAGCACAGGAATAGTAATTTCTaGGGCCTCGGACTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: SRDDGPSMSPSPGLTVKHRNSNF*GLGLCL
Trigger: GAGACAGAGTCCGAGGCCTCAGAAATTACTATTCCT...GTGCTTCACAGTTAAACCTGGAGACGGACTCATGGAAGGACCATCATCTCTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
CDS-3UTR TCA 90 bp CCAAAATCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCGTTTGGCTACTTCATTaGGATCTTCATGCTGCTCAC +
Preference number: 4 (lower is better)
Translates to: PKSESISRPPVLANSTLGVWLLH*DLHAAH
Trigger: GTGAGCAGCATGAAGATCTCAATGAAGTAGCCAAAC...GCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGATTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
CDS-3UTR TCA 90 bp ACTCCTGCCCCAGTGACTGTTGCTCCTACAATTAAGAAGTACACTAGGTTGCTGAAACTCCTGCCCCAGTaGCTGTTGCTCCTACAATTA +
Preference number: 4 (lower is better)
Translates to: TPAPVTVAPTIKKYTRLLKLLPQ*LLLLQL
Trigger: TAATTGTAGGAGCAACAGTCACTGGGGCAGGAGTTT...CAGCAACCTAGTGTACTTCTTAATTGTAGGAGCAACAGTCACTGGGGCAGGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529877.1
CDS-3UTR TCA 90 bp TCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCAGGCCTGAAAAGATGCCCTaGTTTCATATATCCTTTCTG +
Preference number: 4 (lower is better)
Translates to: SESISRPPVLANSTLGSRPEKMP*FHISFL
Trigger: CAGAAAGGATATATGAAATCAGGGCATCTTTTCAGG...CCTGGAGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527892.5
ENST00000535724.6
CDS-3UTR TCA 90 bp GATAAAACCATGAGCAAGGCCTTAACATCAGGGCTTCTGCTTCCAGGAAGTCATACACATACACAAGGATaGGGCTTGGAAGGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: DKTMSKALTSGLLLPGSHTHTQG*GLEGWE
Trigger: TTCCCAGCCTTCCAAGCCTCATCCTTGTGTATGTGT...ATGACTTCCTGGAAGCAGAAGCCCTGATGTTAAGGCCTTGCTCATGGTTTTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
CDS-3UTR GCA 90 bp ACCAACTGTGGGCAAACTACTGTCCACAAGACCAATAGCTTCATAGCCAACATCCAGCAAAAGCAGCTGTaGCTCCACCAATTAGCAGGA +
Preference number: 4 (lower is better)
Translates to: TNCGQTTVHKTNSFIANIQQKQL*LHQLAG
Trigger: TCCTGCTAATTGGTGGAGGCACAGCTGCTTTTGCTG...GATGTTGGCTATGAAGCTATTGGTCTTGTGGACAGTAGTTTGCCCACAGTTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
ENST00000675037.1
CDS-3UTR GCA 90 bp AACACCAACTGTGGGCAAACTACTGTCCACAAGACCAATAGCTTCATAGCCAACCAGCAAAAGCAGCTGTaGCTCCACCAATTAGCAGGA +
Preference number: 4 (lower is better)
Translates to: NTNCGQTTVHKTNSFIANQQKQL*LHQLAG
Trigger: TCCTGCTAATTGGTGGAGGCACAGCTGCTTTTGCTG...GTTGGCTATGAAGCTATTGGTCTTGTGGACAGTAGTTTGCCCACAGTTGGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
ENST00000675037.1
CDS-3UTR GCA 90 bp AACACCAACTGTGGGCAAACTACTGTCCACAAGACCAATAGCTTCATAGCCAACTCTACTCTTCACCTCTaGTCCAGCCCTATCAATGGC +
Preference number: 4 (lower is better)
Translates to: NTNCGQTTVHKTNSFIANSTLHL*SSPING
Trigger: GCCATTGATAGGGCTGGAGCAGAGGTGAAGAGTAGA...GTTGGCTATGAAGCTATTGGTCTTGTGGACAGTAGTTTGCCCACAGTTGGTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
ENST00000675037.1
CDS-3UTR GCA 90 bp TACAACAGGTATCAGAACTGCTGGCCCCAGATTAAGCTTCAGATGGTGAACTCTATACCAGTTCCTGACTaGTCTGTGGCAGATTTGGGG +
Preference number: 4 (lower is better)
Translates to: YNRYQNCWPQIKLQMVNSIPVPD*SVADLG
Trigger: CCCCAAATCTGCCACAGAGCAGTCAGGAACTGGTAT...AGAGTTCACCATCTGAAGCTTAATCTGGGGCCAGCAGTTCTGATACCTGTTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527892.5
ENST00000535724.6
CDS-3UTR GCA 90 bp ACCAACTGTGGGCAAACTACTGTCCACAAGACCAATAGCTTCATAGCCAACATCATACCAGTTCCTGACTaGTCTGTGGCAGATTTGGGG +
Preference number: 4 (lower is better)
Translates to: TNCGQTTVHKTNSFIANIIPVPD*SVADLG
Trigger: CCCCAAATCTGCCACAGAGCAGTCAGGAACTGGTAT...GATGTTGGCTATGAAGCTATTGGTCTTGTGGACAGTAGTTTGCCCACAGTTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
ENST00000675037.1
CDS-3UTR GCA 90 bp AATCACTTGAATCCGGGAGGTAGAGGTTGTGATGAGCCTAGGTCGCACCATTGCTTGAGATCTTCATGCTaGTCACCGTCCTTAATGATC +
Preference number: 4 (lower is better)
Translates to: NHLNPGGRGCDEPRSHHCLRSSC*SPSLMI
Trigger: GATCATTAAGGACGGTGAGCAGCATGAAGATCTCAA...GCAATGGTGCGACCTAGGCTCATCACAACCTCTACCTCCCGGATTCAAGTGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676229.1
CDS-3UTR GCA 90 bp GGCCTGTTCTCCCAGTGTTCAGAAGGGATTTGGTTGAAGCTGAAACTGCCCTTAAGAAGTACACTAGGTTaGTGCCATCTTTCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: GLFSQCSEGIWLKLKLPLRSTLG*CHLSQK
Trigger: CTTCTGGGAAAGATGGCAGCAACCTAGTGTACTTCT...TAAGGGCAGTTTCAGCTTCAACCAAATCCCTTCTGAACACTGGGAGAACAGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676229.1
CDS-3UTR GCA 90 bp ATTCAGGTTGGGTCAGGGGATTTGGAGGAAGGTTTAAGGAAGTCAGGCTTTGTTGGCATAATAAACTCCTaGCCCAGTGACTGTTGCTCC +
Preference number: 4 (lower is better)
Translates to: IQVGSGDLEEGLRKSGFVGIINS*PSDCCS
Trigger: GGAGCAACAGTCACTGGGGCAGGAGTTTATTATGCC...AACAAAGCCTGACTTCCTTAAACCTTCCTCCAAATCCCCTGACCCAACCTGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675050.1
CDS-3UTR GCA 90 bp CTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCAGGCATCCTCCTGAAAAGATaGCCTGATTTCATATATCCT +
Preference number: 4 (lower is better)
Translates to: LSLFPGHQSWPTQHWAPGILLKR*PDFIYP
Trigger: AGGATATATGAAATCAGGGCATCTTTTCAGGAGGAT...GCCTGGAGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527892.5
ENST00000535724.6
CDS-3UTR GCA 90 bp GATGATGGTCCTTCCATGAGTCCGTCTCCAGGTTTAACTGTGAAGCACCAGGTCGTGCTGCAATTTGCTTaGTTTCTAATATGCGTGGCT +
Preference number: 4 (lower is better)
Translates to: DDGPSMSPSPGLTVKHQVVLQFA*FLICVA
Trigger: AGCCACGCATATTAGAAAGCAAGCAAATTGCAGCAC...GACCTGGTGCTTCACAGTTAAACCTGGAGACGGACTCATGGAAGGACCATCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
CDS-3UTR GCA 90 bp GATAAAACCATGAGCAAGGCCTTAACATCAGGGCTTCTGCTTCCAGGAAGTCATCCTGTGCTTGGTCGGTaGTGCAATTTGCTTGCTTTC +
Preference number: 4 (lower is better)
Translates to: DKTMSKALTSGLLLPGSHPVLGR*CNLLAF
Trigger: GAAAGCAAGCAAATTGCAGCACCGACCAAGCACAGG...ATGACTTCCTGGAAGCAGAAGCCCTGATGTTAAGGCCTTGCTCATGGTTTTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
CDS-3UTR GCA 90 bp CAAAATCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTGGCATAATAAACTCCTaGCCCAGTGACTGTTGCTCA +
Preference number: 4 (lower is better)
Translates to: QNLSLFPGHQSWPTQHWAGIINS*PSDCCS
Trigger: TGAGCAACAGTCACTGGGGCAGGAGTTTATTATGCC...AGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGATTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674555.1
CDS-3UTR CCA 90 bp TTTCACCATGTTGTCTCTCACATCCAGCTGTACTACCTTCTTCCCAGTGAGGACGAAAGGAACATGACTTaGCGCCTTGTCTTGAGGAAC +
Preference number: 4 (lower is better)
Translates to: FHHVVSHIQLYYLLPSEDERNMT*RLVLRN
Trigger: GTTCCTCAAGACAAGGCGCCAAGTCATGTTCCTTTC...GTCCTCACTGGGAAGAAGGTAGTACAGCTGGATGTGAGAGACAACATGGTGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527892.5
ENST00000674555.1
ENST00000674997.1
ENST00000675774.1
ENST00000676144.1
CDS-3UTR CCA 90 bp TGTGTTCACATGATTATGGAGCGGTCTTGTTTTTGTCTCAATCCACCATGGTCACCAGGCCACCAGTCTTaGCCAACTCAACATTGGGCT +
Preference number: 4 (lower is better)
Translates to: CVHMIMERSCFCLNPPWSPGHQS*PTQHWA
Trigger: AGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGG...TGACCATGGTGGATTGAGACAAAAACAAGACCGCTCCATAATCATGTGAACACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675050.1
CDS-3UTR CCA 90 bp CCAAAATCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTTGCCAATTCCACTGTaGGGCTTCAGTCTTCATGAA +
Preference number: 4 (lower is better)
Translates to: PKSESISRPPVLANSTLGLPIPL*GFSLHE
Trigger: TTCATGAAGACTGAAGCCCCACAGTGGAATTGGCAA...GCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGATTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
CDS-3UTR CCA 90 bp GAGGATTCAGGTTGGGTCAGGGGATTTGGAGGAAGGTTTAAGGAAGTCAGGCTTTTGCCAATTCCACTGTaGGGCTTCAGTCTTCATGAA +
Preference number: 4 (lower is better)
Translates to: EDSGWVRGFGGRFKEVRLLPIPL*GFSLHE
Trigger: TTCATGAAGACTGAAGCCCCACAGTGGAATTGGCAA...AAGCCTGACTTCCTTAAACCTTCCTCCAAATCCCCTGACCCAACCTGAATCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675050.1
CDS-3UTR CCA 90 bp CCCATCTCTGTAAGCAGCAATTACTGCTGTATAATAATTTCGATGTCACAGGATGGGAGTCAAGTGTTGTaGGCCGAGGCCACAGCAGGT +
Preference number: 4 (lower is better)
Translates to: PISVSSNYCCIIISMSQDGSQVL*AEATAG
Trigger: ACCTGCTGTGGCCTCGGCCCACAACACTTGACTCCC...ATCCTGTGACATCGAAATTATTATACAGCAGTAATTGCTGCTTACAGAGATGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676229.1
CDS-3UTR CCA 90 bp GTCTTCAGAGATAGTGAACTTCCTGAGAGGAGAGGAGGGGAGTCAAGTGTTGTGTGCAAATTCTTACGGTaGAGATTTGGCCTGTTCTCC +
Preference number: 4 (lower is better)
Translates to: VFRDSELPERRGGESSVVCKFLR*RFGLFS
Trigger: GGAGAACAGGCCAAATCTCCACCGTAAGAATTTGCA...CACAACACTTGACTCCCCTCCTCTCCTCTCAGGAAGTTCACTATCTCTGAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676229.1
CDS-3UTR CCA 90 bp ATTCAGGTTGGGTCAGGGGATTTGGAGGAAGGTTTAAGGAAGTCAGGCTTTGTTAAACCAGGATGGGGGTaGGGGTTGTTCGGTCATTTT +
Preference number: 4 (lower is better)
Translates to: IQVGSGDLEEGLRKSGFVKPGWG*GLFGHF
Trigger: AAAATGACCGAACAACCCCCACCCCCATCCTGGTTT...AACAAAGCCTGACTTCCTTAAACCTTCCTCCAAATCCCCTGACCCAACCTGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000675050.1
CDS-3UTR CCA 90 bp ACCAACTGTGGGCAAACTACTGTCCACAAGACCAATAGCTTCATAGCCAACATCGGCAGACAGACTTCTTaGAGTACCTCCTTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: TNCGQTTVHKTNSFIANIGRQTS*STSFFP
Trigger: TGGGAAGAAGGAGGTACTCCAAGAAGTCTGTCTGCC...GATGTTGGCTATGAAGCTATTGGTCTTGTGGACAGTAGTTTGCCCACAGTTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674722.1
CDS-3UTR TCA 90 bp AGCTTCCAGAGACGCCAGAGGCTGCTTTTCTTTCAGCAAATGTTCATTTTGAGATTCTCGGGGAAGAGTTaGATCACTTCTGTGCCCAAG +
Preference number: 4 (lower is better)
Translates to: SFQRRQRLLFFQQMFILRFSGKS*ITSVPK
Trigger: CTTGGGCACAGAAGTGATTCAACTCTTCCCCGAGAA...TCTCAAAATGAACATTTGCTGAAAGAAAAGCAGCCTCTGGCGTCTCTGGAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000675050.1
CDS-3UTR TCA 90 bp TACAACAGGTATCAGAACTGCTGGCCCCAGATTAAGCTTCAGATGGTGAACTCTATCACTCCAGAACATTaGCTGATGCCAGTACGGCTT +
Preference number: 4 (lower is better)
Translates to: YNRYQNCWPQIKLQMVNSITPEH*LMPVRL
Trigger: AAGCCGTACTGGCATCAGTCAATGTTCTGGAGTGAT...AGAGTTCACCATCTGAAGCTTAATCTGGGGCCAGCAGTTCTGATACCTGTTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527892.5
ENST00000535724.6
CDS-3UTR TCA 90 bp CCGTCTCCAGGTTTAACTGTGAAGCACCAGGTCTCTGAACTCAGATTTGTAGTAATCACTCCAGAACATTaGCTGATGCCAGTACGGCTT +
Preference number: 4 (lower is better)
Translates to: PSPGLTVKHQVSELRFVVITPEH*LMPVRL
Trigger: AAGCCGTACTGGCATCAGTCAATGTTCTGGAGTGAT...TACTACAAATCTGAGTTCAGAGACCTGGTGCTTCACAGTTAAACCTGGAGACGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
CDS-3UTR TCA 90 bp ACCAACTGTGGGCAAACTACTGTCCACAAGACCAATAGCTTCATAGCCAACATCAGGAATAGTAATTTCTaGGGCCTCGGACTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: TNCGQTTVHKTNSFIANIRNSNF*GLGLCL
Trigger: GAGACAGAGTCCGAGGCCTCAGAAATTACTATTCCT...GATGTTGGCTATGAAGCTATTGGTCTTGTGGACAGTAGTTTGCCCACAGTTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
ENST00000675037.1
CDS-3UTR TCA 90 bp CAGTCACCTAAGGCTTACATAAGTGCTTTGCAACCTCTGAATAGGAAGCATCCTGTGCTTTGCAACCTCTaGATAGGAAGCATCCTCCTG +
Preference number: 4 (lower is better)
Translates to: QSPKAYISALQPLNRKHPVLCNL*IGSILL
Trigger: CAGGAGGATGCTTCCTATTCAGAGGTTGCAAAGCAC...AGGATGCTTCCTATTCAGAGGTTGCAAAGCACTTATGTAAGCCTTAGGTGACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527892.5
ENST00000535724.6
CDS-3UTR TCA 90 bp CCGTCTCCAGGTTTAACTGTGAAGCACCAGGTCTCTGAACTCAGATTTGTAGTAAAACTCCTGCCCCAGTaGCTGTTGCTCCTACAATTA +
Preference number: 4 (lower is better)
Translates to: PSPGLTVKHQVSELRFVVKLLPQ*LLLLQL
Trigger: TAATTGTAGGAGCAACAGTCACTGGGGCAGGAGTTT...TACTACAAATCTGAGTTCAGAGACCTGGTGCTTCACAGTTAAACCTGGAGACGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676229.1
CDS-3UTR TCA 90 bp CCCATCTCTGTAAGCAGCAATTACTGCTGTATAATAATTTCGATGTCACAGGATACTCCTGACCTCAGGTaGTCTACCTGCCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: PISVSSNYCCIIISMSQDTPDLR*STCLGL
Trigger: GAGGCCAAGGCAGGTAGATCACCTGAGGTCAGGAGT...ATCCTGTGACATCGAAATTATTATACAGCAGTAATTGCTGCTTACAGAGATGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676229.1
CDS-3UTR TCA 90 bp CCCATCTCTGTAAGCAGCAATTACTGCTGTATAATAATTTCGATGTCACAGGATCCTGTCTCAGCCTCCTaGGTAGCTGGGACTACAGGT +
Preference number: 4 (lower is better)
Translates to: PISVSSNYCCIIISMSQDPVSAS*VAGTTG
Trigger: ACCTGTAGTCCCAGCTACTCAGGAGGCTGAGACAGG...ATCCTGTGACATCGAAATTATTATACAGCAGTAATTGCTGCTTACAGAGATGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676229.1
CDS-3UTR TCA 90 bp GGAAGGTTTAAGGAAGTCAGGCTTTGTTCTGGACTGGATGCTGGTGATTCTGTGCTCTTGAGAAGCTGCTaGTTTTCCTTCAAGGAAGCA +
Preference number: 4 (lower is better)
Translates to: GRFKEVRLCSGLDAGDSVLLRSC*FSFKEA
Trigger: TGCTTCCTTGAAGGAAAATCAGCAGCTTCTCAAGAG...CACAGAATCACCAGCATCCAGTCCAGAACAAAGCCTGACTTCCTTAAACCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675050.1
CDS-3UTR GCA 90 bp AACACCAACTGTGGGCAAACTACTGTCCACAAGACCAATAGCTTCATAGCCAACCAGAATTATCGATTTTaGCCCCTGATGCACCAGAGC +
Preference number: 4 (lower is better)
Translates to: NTNCGQTTVHKTNSFIANQNYRF*PLMHQS
Trigger: GCTCTGGTGCATCAGGGGGCAAAATCGATAATTCTG...GTTGGCTATGAAGCTATTGGTCTTGTGGACAGTAGTTTGCCCACAGTTGGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000416073.7
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000675037.1
CDS-3UTR GCA 90 bp AGCTTCCAGAGACGCCAGAGGCTGCTTTTCTTTCAGCAAATGTTCATTTTGAGACAGCAAAAGCAGCTGTaGCTCCACCAATTAGCAGGA +
Preference number: 4 (lower is better)
Translates to: SFQRRQRLLFFQQMFILRQQKQL*LHQLAG
Trigger: TCCTGCTAATTGGTGGAGGCACAGCTGCTTTTGCTG...TCTCAAAATGAACATTTGCTGAAAGAAAAGCAGCCTCTGGCGTCTCTGGAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000675050.1
CDS-3UTR GCA 90 bp ATGTGGTCAGTTTCTACCTTCCTGCCGTCTTTCAGCTTGATAAGTAACTTGCCATCTACTCTTCACCTCTaGTCCAGCCCTATCAATGGC +
Preference number: 4 (lower is better)
Translates to: MWSVSTFLPSFSLISNLPSTLHL*SSPING
Trigger: GCCATTGATAGGGCTGGAGCAGAGGTGAAGAGTAGA...TGGCAAGTTACTTATCAAGCTGAAAGACGGCAGGAAGGTAGAAACTGACCACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674997.1
CDS-3UTR GCA 90 bp AACACCAACTGTGGGCAAACTACTGTCCACAAGACCAATAGCTTCATAGCCAACCTGACTCCAACGGATTaGACAATAGCATTGGGCATC +
Preference number: 4 (lower is better)
Translates to: NTNCGQTTVHKTNSFIANLTPTD*TIALGI
Trigger: GATGCCCAATGCTATTGTGCAATCCGTTGGAGTCAG...GTTGGCTATGAAGCTATTGGTCTTGTGGACAGTAGTTTGCCCACAGTTGGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
ENST00000675037.1
CDS-3UTR GCA 90 bp ACCAACTGTGGGCAAACTACTGTCCACAAGACCAATAGCTTCATAGCCAACATCCTGACTCCAACGGATTaGACAATAGCATTGGGCATC +
Preference number: 4 (lower is better)
Translates to: TNCGQTTVHKTNSFIANILTPTD*TIALGI
Trigger: GATGCCCAATGCTATTGTGCAATCCGTTGGAGTCAG...GATGTTGGCTATGAAGCTATTGGTCTTGTGGACAGTAGTTTGCCCACAGTTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
ENST00000675037.1
CDS-3UTR GCA 90 bp CACATGATTATGGAGCGGTCTTGTTTTTGTCTCAATCCACCATGGTCACAGAGTATACCAGTTCCTGACTaGTCTGTGGCAGATTTGGGG +
Preference number: 4 (lower is better)
Translates to: HMIMERSCFCLNPPWSQSIPVPD*SVADLG
Trigger: CCCCAAATCTGCCACAGAGCAGTCAGGAACTGGTAT...ACTCTGTGACCATGGTGGATTGAGACAAAAACAAGACCGCTCCATAATCATGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675050.1
CDS-3UTR GCA 90 bp CCAAAATCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTTGAGATCTTCATGCTaGTCACCGTCCTTAATGATC +
Preference number: 4 (lower is better)
Translates to: PKSESISRPPVLANSTLGLRSSC*SPSLMI
Trigger: GATCATTAAGGACGGTGAGCAGCATGAAGATCTCAA...GCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGATTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
CDS-3UTR GCA 90 bp ATCCTCTTTCATAGTCTTGTAGGCATAATAAACTCCTGCCCCAGTGACTGTTGCGGCATAATAAACTCCTaGCCCAGTGACTGTTGCTCC +
Preference number: 4 (lower is better)
Translates to: ILFHSLVGIINSCPSDCCGIINS*PSDCCS
Trigger: GGAGCAACAGTCACTGGGGCAGGAGTTTATTATGCC...GCAACAGTCACTGGGGCAGGAGTTTATTATGCCTACAAGACTATGAAAGAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529877.1
CDS-3UTR GCA 90 bp GTCTTCAGAGATAGTGAACTTCCTGAGAGGAGAGGAGGGGAGTCAAGTGTTGTGGTCGGTGCTGCAATTTaGTTGCTTTCTAATATGCGT +
Preference number: 4 (lower is better)
Translates to: VFRDSELPERRGGESSVVVGAAI*LLSNMR
Trigger: ACGCATATTAGAAAGCAAGCAAATTGCAGCACCGAC...CACAACACTTGACTCCCCTCCTCTCCTCTCAGGAAGTTCACTATCTCTGAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
CDS-3UTR GCA 90 bp TTTCACCATGTTGTCTCTCACATCCAGCTGTACTACCTTCTTCCCAGTGAGGACGCATCGCTGTTAAGTTaGTCAGGTGACAGCTTTTTG +
Preference number: 4 (lower is better)
Translates to: FHHVVSHIQLYYLLPSEDASLLS*SGDSFL
Trigger: CAAAAAGCTGTCACCTGAGCAACTTAACAGCGATGC...GTCCTCACTGGGAAGAAGGTAGTACAGCTGGATGTGAGAGACAACATGGTGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675774.1
CDS-3UTR CCA 90 bp AACACCAACTGTGGGCAAACTACTGTCCACAAGACCAATAGCTTCATAGCCAACGAAAGGAACATGACTTaGCGCCTTGTCTTGAGGAAC +
Preference number: 4 (lower is better)
Translates to: NTNCGQTTVHKTNSFIANERNMT*RLVLRN
Trigger: GTTCCTCAAGACAAGGCGCCAAGTCATGTTCCTTTC...GTTGGCTATGAAGCTATTGGTCTTGTGGACAGTAGTTTGCCCACAGTTGGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
ENST00000675037.1
CDS-3UTR CCA 90 bp AACACCAACTGTGGGCAAACTACTGTCCACAAGACCAATAGCTTCATAGCCAACTTCCTGACTGCTCTGTaGCAGATTTGGGGTTGTCTT +
Preference number: 4 (lower is better)
Translates to: NTNCGQTTVHKTNSFIANFLTAL*QIWGCL
Trigger: AAGACAACCCCAAATCTGCCACAGAGCAGTCAGGAA...GTTGGCTATGAAGCTATTGGTCTTGTGGACAGTAGTTTGCCCACAGTTGGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
ENST00000675037.1
CDS-3UTR CCA 90 bp ACCAACTGTGGGCAAACTACTGTCCACAAGACCAATAGCTTCATAGCCAACATCTTCCTGACTGCTCTGTaGCAGATTTGGGGTTGTCTT +
Preference number: 4 (lower is better)
Translates to: TNCGQTTVHKTNSFIANIFLTAL*QIWGCL
Trigger: AAGACAACCCCAAATCTGCCACAGAGCAGTCAGGAA...GATGTTGGCTATGAAGCTATTGGTCTTGTGGACAGTAGTTTGCCCACAGTTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
ENST00000675037.1
CDS-3UTR CCA 90 bp TTTCACCATGTTGTCTCTCACATCCAGCTGTACTACCTTCTTCCCAGTGAGGACTTGCCAATTCCACTGTaGGGCTTCAGTCTTCATGAA +
Preference number: 4 (lower is better)
Translates to: FHHVVSHIQLYYLLPSEDLPIPL*GFSLHE
Trigger: TTCATGAAGACTGAAGCCCCACAGTGGAATTGGCAA...GTCCTCACTGGGAAGAAGGTAGTACAGCTGGATGTGAGAGACAACATGGTGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527892.5
ENST00000674555.1
ENST00000674997.1
CDS-3UTR CCA 90 bp CAAAATCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTGAAAAATCCTGTGCTTaGTCGGTGCTGCAATTTGCT +
Preference number: 4 (lower is better)
Translates to: QNLSLFPGHQSWPTQHWAEKSCA*SVLQFA
Trigger: AGCAAATTGCAGCACCGACCAAGCACAGGATTTTTC...AGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGATTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674957.1
CDS-3UTR CCA 90 bp TGTGTTCACATGATTATGGAGCGGTCTTGTTTTTGTCTCAATCCACCATGGTCACAGAAAGCAAGGCACTaGGAGCGAGTCCCAACAATC +
Preference number: 4 (lower is better)
Translates to: CVHMIMERSCFCLNPPWSQKARH*ERVPTI
Trigger: GATTGTTGGGACTCGCTCCCAGTGCCTTGCTTTCTG...TGACCATGGTGGATTGAGACAAAAACAAGACCGCTCCATAATCATGTGAACACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675050.1
CDS-3UTR CCA 90 bp GGAAGGTTTAAGGAAGTCAGGCTTTGTTCTGGACTGGATGCTGGTGATTCTGTGGAGTGTATCTGTGTGTaGTTTTGTGTACGCGTGTCT +
Preference number: 4 (lower is better)
Translates to: GRFKEVRLCSGLDAGDSVECICV*FCVRVS
Trigger: AGACACGCGTACACAAAACCACACACAGATACACTC...CACAGAATCACCAGCATCCAGTCCAGAACAAAGCCTGACTTCCTTAAACCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675050.1
3UTR CAA 72 bp CCACCCATGCAGTCACCTAAGGCTTACATAAGTGCTTaGCAACCTCTGAATAGGAAGCATCCTCCTGAAAAG +
Preference number: 4 (lower is better)
Translates to: PPMQSPKAYISA*QPLNRKHPPEK
Trigger: CTTTTCAGGAGGATGCTTCCTATTCAGAGGTTGCAAAGCACTTATGTAAGCCTTAGGTGACTGCATGGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527892.5
ENST00000535724.6
3UTR CAA 72 bp AGAAAAATCCTGTGCTTGGTCGGTGCTGCAATTTGCTaGCTTTCTAATATGCGTGGCTTTCCACCTTCACCC +
Preference number: 4 (lower is better)
Translates to: RKILCLVGAAIC*LSNMRGFPPSP
Trigger: GGGTGAAGGTGGAAAGCCACGCATATTAGAAAGCAAGCAAATTGCAGCACCGACCAAGCACAGGATTTTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
3UTR CAA 72 bp AAAGCATCGCTGTTAAGTTGCTCAGGTGACAGCTTTTaGGTCACCAAGGGATCCCTCACCAGAACTAATCTC +
Preference number: 4 (lower is better)
Translates to: KASLLSCSGDSF*VTKGSLTRTNL
Trigger: GAGATTAGTTCTGGTGAGGGATCCCTTGGTGACCAAAAAGCTGTCACCTGAGCAACTTAACAGCGATGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675774.1
CDS-3UTR TCA 90 bp CAAAATCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTAAACCACAGTTCTTTTaGAAGAGGAGGTCGCATGTA +
Preference number: 4 (lower is better)
Translates to: QNLSLFPGHQSWPTQHWAKPQFF*KRRSHV
Trigger: TACATGCGACCTCCTCTTTCAAAAGAACTGTGGTTT...AGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
CDS-3UTR TCA 90 bp CAGTCACCTAAGGCTTACATAAGTGCTTTGCAACCTCTGAATAGGAAGCATCCTAGGAATAGTAATTTCTaGGGCCTCGGACTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: QSPKAYISALQPLNRKHPRNSNF*GLGLCL
Trigger: GAGACAGAGTCCGAGGCCTCAGAAATTACTATTCCT...AGGATGCTTCCTATTCAGAGGTTGCAAAGCACTTATGTAAGCCTTAGGTGACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527892.5
ENST00000535724.6
CDS-3UTR TCA 90 bp ATGTGGTCAGTTTCTACCTTCCTGCCGTCTTTCAGCTTGATAAGTAACTTGCCAAGGAATAGTAATTTCTaGGGCCTCGGACTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: MWSVSTFLPSFSLISNLPRNSNF*GLGLCL
Trigger: GAGACAGAGTCCGAGGCCTCAGAAATTACTATTCCT...TGGCAAGTTACTTATCAAGCTGAAAGACGGCAGGAAGGTAGAAACTGACCACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674997.1
CDS-3UTR TCA 90 bp ACCAACTGTGGGCAAACTACTGTCCACAAGACCAATAGCTTCATAGCCAACATCGTTTGGCTACTTCATTaGGATCTTCATGCTGCTCAC +
Preference number: 4 (lower is better)
Translates to: TNCGQTTVHKTNSFIANIVWLLH*DLHAAH
Trigger: GTGAGCAGCATGAAGATCTCAATGAAGTAGCCAAAC...GATGTTGGCTATGAAGCTATTGGTCTTGTGGACAGTAGTTTGCCCACAGTTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
ENST00000675037.1
CDS-3UTR TCA 90 bp CCGTCTCCAGGTTTAACTGTGAAGCACCAGGTCTCTGAACTCAGATTTGTAGTAGTTTGGCTACTTCATTaGGATCTTCATGCTGCTCAC +
Preference number: 4 (lower is better)
Translates to: PSPGLTVKHQVSELRFVVVWLLH*DLHAAH
Trigger: GTGAGCAGCATGAAGATCTCAATGAAGTAGCCAAAC...TACTACAAATCTGAGTTCAGAGACCTGGTGCTTCACAGTTAAACCTGGAGACGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
CDS-3UTR TCA 90 bp CACATGATTATGGAGCGGTCTTGTTTTTGTCTCAATCCACCATGGTCACAGAGTAAACTCCTGCCCCAGTaGCTGTTGCTCCTACAATTA +
Preference number: 4 (lower is better)
Translates to: HMIMERSCFCLNPPWSQSKLLPQ*LLLLQL
Trigger: TAATTGTAGGAGCAACAGTCACTGGGGCAGGAGTTT...ACTCTGTGACCATGGTGGATTGAGACAAAAACAAGACCGCTCCATAATCATGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675050.1
CDS-3UTR TCA 90 bp GAGGATTCAGGTTGGGTCAGGGGATTTGGAGGAAGGTTTAAGGAAGTCAGGCTTATGCTGGTGATTCTGTaGTTGGATTGGGTATCTTAT +
Preference number: 4 (lower is better)
Translates to: EDSGWVRGFGGRFKEVRLMLVIL*LDWVSY
Trigger: ATAAGATACCCAATCCAATCACAGAATCACCAGCAT...AAGCCTGACTTCCTTAAACCTTCCTCCAAATCCCCTGACCCAACCTGAATCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675050.1
CDS-3UTR GCA 90 bp CATAGTCTTGTAGGCATAATAAACTCCTGCCCCAGTGACTGTTGCTCCTACAATCAGAATTATCGATTTTaGCCCCTGATGCACCAGAGC +
Preference number: 4 (lower is better)
Translates to: HSLVGIINSCPSDCCSYNQNYRF*PLMHQS
Trigger: GCTCTGGTGCATCAGGGGGCAAAATCGATAATTCTG...ATTGTAGGAGCAACAGTCACTGGGGCAGGAGTTTATTATGCCTACAAGACTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000529877.1
CDS-3UTR GCA 90 bp ATGTGGTCAGTTTCTACCTTCCTGCCGTCTTTCAGCTTGATAAGTAACTTGCCACAGAATTATCGATTTTaGCCCCTGATGCACCAGAGC +
Preference number: 4 (lower is better)
Translates to: MWSVSTFLPSFSLISNLPQNYRF*PLMHQS
Trigger: GCTCTGGTGCATCAGGGGGCAAAATCGATAATTCTG...TGGCAAGTTACTTATCAAGCTGAAAGACGGCAGGAAGGTAGAAACTGACCACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
CDS-3UTR GCA 90 bp ATTTGTAACGCAAATACAACAGGTATCAGAACTGCTGGCCCCAGATTAAGCTTCCAGCAAAAGCAGCTGTaGCTCCACCAATTAGCAGGA +
Preference number: 4 (lower is better)
Translates to: ICNANTTGIRTAGPRLSFQQKQL*LHQLAG
Trigger: TCCTGCTAATTGGTGGAGGCACAGCTGCTTTTGCTG...GAAGCTTAATCTGGGGCCAGCAGTTCTGATACCTGTTGTATTTGCGTTACAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527892.5
ENST00000535724.6
CDS-3UTR GCA 90 bp CAAAATCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTTTGAGATCTTCATGCTaGTCACCGTCCTTAATGATC +
Preference number: 4 (lower is better)
Translates to: QNLSLFPGHQSWPTQHWALRSSC*SPSLMI
Trigger: GATCATTAAGGACGGTGAGCAGCATGAAGATCTCAA...AGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
CDS-3UTR GCA 90 bp CCAGTGACTGTTGCTCCTACAATTAAGAAGTACACTAGGTTGCTGCCATCTTTCAGTACACTAGGTTGCTaGCATCTTTCCCAGAAGCAC +
Preference number: 4 (lower is better)
Translates to: PVTVAPTIKKYTRLLPSFSTLGC*HLSQKH
Trigger: GTGCTTCTGGGAAAGATGGCAGCAACCTAGTGTACT...GAAAGATGGCAGCAACCTAGTGTACTTCTTAATTGTAGGAGCAACAGTCACTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529877.1
CDS-3UTR GCA 90 bp CACCATGTTGTCTCTCACATCCAGCTGTACTACCTTCTTCCCAGTGAGGACAGCATCCTCCTGAAAAGATaGCCTGATTTCATATATCCT +
Preference number: 4 (lower is better)
Translates to: HHVVSHIQLYYLLPSEDSILLKR*PDFIYP
Trigger: AGGATATATGAAATCAGGGCATCTTTTCAGGAGGAT...GCTGTCCTCACTGGGAAGAAGGTAGTACAGCTGGATGTGAGAGACAACATGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527892.5
CDS-3UTR CCA 90 bp ATGTGGTCAGTTTCTACCTTCCTGCCGTCTTTCAGCTTGATAAGTAACTTGCCAGAAAGGAACATGACTTaGCGCCTTGTCTTGAGGAAC +
Preference number: 4 (lower is better)
Translates to: MWSVSTFLPSFSLISNLPERNMT*RLVLRN
Trigger: GTTCCTCAAGACAAGGCGCCAAGTCATGTTCCTTTC...TGGCAAGTTACTTATCAAGCTGAAAGACGGCAGGAAGGTAGAAACTGACCACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674997.1
CDS-3UTR CCA 90 bp CCGTCTCCAGGTTTAACTGTGAAGCACCAGGTCTCTGAACTCAGATTTGTAGTAGAAAAATCCTGTGCTTaGTCGGTGCTGCAATTTGCT +
Preference number: 4 (lower is better)
Translates to: PSPGLTVKHQVSELRFVVEKSCA*SVLQFA
Trigger: AGCAAATTGCAGCACCGACCAAGCACAGGATTTTTC...TACTACAAATCTGAGTTCAGAGACCTGGTGCTTCACAGTTAAACCTGGAGACGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
CDS-3UTR CCA 90 bp GATAAAACCATGAGCAAGGCCTTAACATCAGGGCTTCTGCTTCCAGGAAGTCATTGTTCAGAAGGGATTTaGTTGAAGCTGAAACTGCCC +
Preference number: 4 (lower is better)
Translates to: DKTMSKALTSGLLLPGSHCSEGI*LKLKLP
Trigger: GGGCAGTTTCAGCTTCAACCAAATCCCTTCTGAACA...ATGACTTCCTGGAAGCAGAAGCCCTGATGTTAAGGCCTTGCTCATGGTTTTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676229.1
3UTR CAA 72 bp GTGACTGTTGCTCCTACAATTAAGAAGTACACTAGGTaGCTGCCATCTTTCCCAGAAGCACCTGTAGATGCT +
Preference number: 4 (lower is better)
Translates to: VTVAPTIKKYTR*LPSFPEAPVDA
Trigger: AGCATCTACAGGTGCTTCTGGGAAAGATGGCAGCAACCTAGTGTACTTCTTAATTGTAGGAGCAACAGTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529877.1
CDS-3UTR TCA 90 bp ACCAACTGTGGGCAAACTACTGTCCACAAGACCAATAGCTTCATAGCCAACATCAAACCACAGTTCTTTTaGAAGAGGAGGTCGCATGTA +
Preference number: 4 (lower is better)
Translates to: TNCGQTTVHKTNSFIANIKPQFF*KRRSHV
Trigger: TACATGCGACCTCCTCTTTCAAAAGAACTGTGGTTT...GATGTTGGCTATGAAGCTATTGGTCTTGTGGACAGTAGTTTGCCCACAGTTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
ENST00000675037.1
CDS-3UTR TCA 90 bp TTTCACCATGTTGTCTCTCACATCCAGCTGTACTACCTTCTTCCCAGTGAGGACCCTGAAAAGATGCCCTaGTTTCATATATCCTTTCTG +
Preference number: 4 (lower is better)
Translates to: FHHVVSHIQLYYLLPSEDPEKMP*FHISFL
Trigger: CAGAAAGGATATATGAAATCAGGGCATCTTTTCAGG...GTCCTCACTGGGAAGAAGGTAGTACAGCTGGATGTGAGAGACAACATGGTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527892.5
CDS-3UTR TCA 90 bp ACAGCTTTTTGGTCACCAAGGGATCCCTCACCAGAACTAATCTCAGTGTTTAGCTTAAACTCTTCCTACTaGTCCTGCCAAACACATCTC +
Preference number: 4 (lower is better)
Translates to: TAFWSPRDPSPELISVFSLNSSY*SCQTHL
Trigger: GAGATGTGTTTGGCAGGATCAGTAGGAAGAGTTTAA...GCTAAACACTGAGATTAGTTCTGGTGAGGGATCCCTTGGTGACCAAAAAGCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675774.1
CDS-3UTR GCA 90 bp GATAAAACCATGAGCAAGGCCTTAACATCAGGGCTTCTGCTTCCAGGAAGTCATTTGAGATCTTCATGCTaGTCACCGTCCTTAATGATC +
Preference number: 4 (lower is better)
Translates to: DKTMSKALTSGLLLPGSHLRSSC*SPSLMI
Trigger: GATCATTAAGGACGGTGAGCAGCATGAAGATCTCAA...ATGACTTCCTGGAAGCAGAAGCCCTGATGTTAAGGCCTTGCTCATGGTTTTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
CDS-3UTR GCA 90 bp AACACCAACTGTGGGCAAACTACTGTCCACAAGACCAATAGCTTCATAGCCAACTTGAGATCTTCATGCTaGTCACCGTCCTTAATGATC +
Preference number: 4 (lower is better)
Translates to: NTNCGQTTVHKTNSFIANLRSSC*SPSLMI
Trigger: GATCATTAAGGACGGTGAGCAGCATGAAGATCTCAA...GTTGGCTATGAAGCTATTGGTCTTGTGGACAGTAGTTTGCCCACAGTTGGTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
ENST00000675037.1
CDS-3UTR GCA 90 bp CCAGGTTTAACTGTGAAGCACCAGGTCTCTGAACTCAGATTTGTAGTAAGTGCCGTCGGTGCTGCAATTTaGTTGCTTTCTAATATGCGT +
Preference number: 4 (lower is better)
Translates to: PGLTVKHQVSELRFVVSAVGAAI*LLSNMR
Trigger: ACGCATATTAGAAAGCAAGCAAATTGCAGCACCGAC...GGCACTTACTACAAATCTGAGTTCAGAGACCTGGTGCTTCACAGTTAAACCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
CDS-3UTR GCA 90 bp CCCATCTCTGTAAGCAGCAATTACTGCTGTATAATAATTTCGATGTCACAGGATAGGCGTGAGCCACTGTaGGCAACCCTAGATGAGTTT +
Preference number: 4 (lower is better)
Translates to: PISVSSNYCCIIISMSQDRREPL*ATLDEF
Trigger: AAACTCATCTAGGGTTGCGCACAGTGGCTCACGCCT...ATCCTGTGACATCGAAATTATTATACAGCAGTAATTGCTGCTTACAGAGATGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676229.1
CDS-3UTR CCA 90 bp ACTGTTGCTCCTACAATTAAGAAGTACACTAGGTTGCTGCCATCTTTCCCAGAAGAAAGGAACATGACTTaGCGCCTTGTCTTGAGGAAC +
Preference number: 4 (lower is better)
Translates to: TVAPTIKKYTRLLPSFPEERNMT*RLVLRN
Trigger: GTTCCTCAAGACAAGGCGCCAAGTCATGTTCCTTTC...TTCTGGGAAAGATGGCAGCAACCTAGTGTACTTCTTAATTGTAGGAGCAACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529877.1
CDS-3UTR CCA 90 bp GGACAGGAGTTGTTCCAGGTAAACAAAGTCTATTCCATACATTTATTTGTTCACCCAGGCCACCAGTCTTaGCCAACTCAACATTGGGCT +
Preference number: 4 (lower is better)
Translates to: GQELFQVNKVYSIHLFVHPGHQS*PTQHWA
Trigger: AGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGG...GTGAACAAATAAATGTATGGAATAGACTTTGTTTACCTGGAACAACTCCTGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
CDS-3UTR CCA 90 bp TACAACAGGTATCAGAACTGCTGGCCCCAGATTAAGCTTCAGATGGTGAACTCTCAAAAACACCAACTGTaGGCAAACTACTGTCCACAA +
Preference number: 4 (lower is better)
Translates to: YNRYQNCWPQIKLQMVNSQKHQL*ANYCPQ
Trigger: TTGTGGACAGTAGTTTGCCCACAGTTGGTGTTTTTG...AGAGTTCACCATCTGAAGCTTAATCTGGGGCCAGCAGTTCTGATACCTGTTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527892.5
ENST00000535724.6
CDS-3UTR CCA 90 bp AACACCAACTGTGGGCAAACTACTGTCCACAAGACCAATAGCTTCATAGCCAACCAAAAACACCAACTGTaGGCAAACTACTGTCCACAA +
Preference number: 4 (lower is better)
Translates to: NTNCGQTTVHKTNSFIANQKHQL*ANYCPQ
Trigger: TTGTGGACAGTAGTTTGCCCACAGTTGGTGTTTTTG...GTTGGCTATGAAGCTATTGGTCTTGTGGACAGTAGTTTGCCCACAGTTGGTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
ENST00000675037.1
CDS-3UTR CCA 90 bp ACCAACTGTGGGCAAACTACTGTCCACAAGACCAATAGCTTCATAGCCAACATCCAAAAACACCAACTGTaGGCAAACTACTGTCCACAA +
Preference number: 4 (lower is better)
Translates to: TNCGQTTVHKTNSFIANIQKHQL*ANYCPQ
Trigger: TTGTGGACAGTAGTTTGCCCACAGTTGGTGTTTTTG...GATGTTGGCTATGAAGCTATTGGTCTTGTGGACAGTAGTTTGCCCACAGTTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
ENST00000675037.1
CDS-3UTR CCA 90 bp CAGTCACCTAAGGCTTACATAAGTGCTTTGCAACCTCTGAATAGGAAGCATCCTTTGCCAATTCCACTGTaGGGCTTCAGTCTTCATGAA +
Preference number: 4 (lower is better)
Translates to: QSPKAYISALQPLNRKHPLPIPL*GFSLHE
Trigger: TTCATGAAGACTGAAGCCCCACAGTGGAATTGGCAA...AGGATGCTTCCTATTCAGAGGTTGCAAAGCACTTATGTAAGCCTTAGGTGACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527892.5
ENST00000535724.6
CDS-3UTR TCA 90 bp CAGTCACCTAAGGCTTACATAAGTGCTTTGCAACCTCTGAATAGGAAGCATCCTAAACCACAGTTCTTTTaGAAGAGGAGGTCGCATGTA +
Preference number: 4 (lower is better)
Translates to: QSPKAYISALQPLNRKHPKPQFF*KRRSHV
Trigger: TACATGCGACCTCCTCTTTCAAAAGAACTGTGGTTT...AGGATGCTTCCTATTCAGAGGTTGCAAAGCACTTATGTAAGCCTTAGGTGACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527892.5
ENST00000535724.6
CDS-3UTR TCA 90 bp ATGTGGTCAGTTTCTACCTTCCTGCCGTCTTTCAGCTTGATAAGTAACTTGCCAAAACCACAGTTCTTTTaGAAGAGGAGGTCGCATGTA +
Preference number: 4 (lower is better)
Translates to: MWSVSTFLPSFSLISNLPKPQFF*KRRSHV
Trigger: TACATGCGACCTCCTCTTTCAAAAGAACTGTGGTTT...TGGCAAGTTACTTATCAAGCTGAAAGACGGCAGGAAGGTAGAAACTGACCACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674997.1
CDS-3UTR TCA 90 bp ATTCAGGTTGGGTCAGGGGATTTGGAGGAAGGTTTAAGGAAGTCAGGCTTTGTTAGCAAATGTTCATTTTaGGAGGATCTCTGGTTTCCA +
Preference number: 4 (lower is better)
Translates to: IQVGSGDLEEGLRKSGFVSKCSF*EDLWFP
Trigger: TGGAAACCAGAGATCCTCTCAAAATGAACATTTGCT...AACAAAGCCTGACTTCCTTAAACCTTCCTCCAAATCCCCTGACCCAACCTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675050.1
CDS-3UTR CCA 90 bp ATTTGTAACGCAAATACAACAGGTATCAGAACTGCTGGCCCCAGATTAAGCTTCTTGCCAATTCCACTGTaGGGCTTCAGTCTTCATGAA +
Preference number: 4 (lower is better)
Translates to: ICNANTTGIRTAGPRLSFLPIPL*GFSLHE
Trigger: TTCATGAAGACTGAAGCCCCACAGTGGAATTGGCAA...GAAGCTTAATCTGGGGCCAGCAGTTCTGATACCTGTTGTATTTGCGTTACAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527892.5
ENST00000535724.6
3UTR CAA 72 bp TTTGGCCTGTTCTCCCAGTGTTCAGAAGGGATTTGGTaGAAGCTGAAACTGCCCTTAATCAAACCCAATATT +
Preference number: 4 (lower is better)
Translates to: FGLFSQCSEGIW*KLKLPLIKPNI
Trigger: AATATTGGGTTTGATTAAGGGCAGTTTCAGCTTCAACCAAATCCCTTCTGAACACTGGGAGAACAGGCCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676229.1
CDS-3UTR CCA 90 bp TGTGTTCACATGATTATGGAGCGGTCTTGTTTTTGTCTCAATCCACCATGGTCACAAAAACACCAACTGTaGGCAAACTACTGTCCACAA +
Preference number: 4 (lower is better)
Translates to: CVHMIMERSCFCLNPPWSQKHQL*ANYCPQ
Trigger: TTGTGGACAGTAGTTTGCCCACAGTTGGTGTTTTTG...TGACCATGGTGGATTGAGACAAAAACAAGACCGCTCCATAATCATGTGAACACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000675050.1
CDS-3UTR CCA 90 bp GGACAGGAGTTGTTCCAGGTAAACAAAGTCTATTCCATACATTTATTTGTTCACCACAAGGATGAGGCTTaGAAGGCTGGGAAAGTCTTC +
Preference number: 4 (lower is better)
Translates to: GQELFQVNKVYSIHLFVHHKDEA*KAGKVF
Trigger: GAAGACTTTCCCAGCCTTCCAAGCCTCATCCTTGTG...GTGAACAAATAAATGTATGGAATAGACTTTGTTTACCTGGAACAACTCCTGTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
CDS-3UTR CCA 90 bp TCTTCATGTTTTTGTCTGTGTTCACATGATTATGGAGCGGTCTTGTTTTTGTCTACGTCATCACTGGCTTaGGCTGAGTGTATCTGTGTG +
Preference number: 4 (lower is better)
Translates to: SSCFCLCSHDYGAVLFLSTSSLA*AECICV
Trigger: CACACAGATACACTCAGCCCAAGCCAGTGATGACGT...AGACAAAAACAAGACCGCTCCATAATCATGTGAACACAGACAAAAACATGAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000675050.1
3UTR CAA 72 bp TGTTCTGGACTGGATGCTGGTGATTCTGTGATTGGATaGGGTATCTTATCAACTCAATCTTATCCAAGAGGA +
Preference number: 4 (lower is better)
Translates to: CSGLDAGDSVIG*GILSTQSYPRG
Trigger: TCCTCTTGGATAAGATTGAGTTGATAAGATACCCAATCCAATCACAGAATCACCAGCATCCAGTCCAGAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675050.1
CDS-3UTR TCA 90 bp CCCATCTCTGTAAGCAGCAATTACTGCTGTATAATAATTTCGATGTCACAGGATAAACCACAGTTCTTTTaGAAGAGGAGGTCGCATGTA +
Preference number: 4 (lower is better)
Translates to: PISVSSNYCCIIISMSQDKPQFF*KRRSHV
Trigger: TACATGCGACCTCCTCTTTCAAAAGAACTGTGGTTT...ATCCTGTGACATCGAAATTATTATACAGCAGTAATTGCTGCTTACAGAGATGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676229.1
CDS-3UTR TCA 90 bp TCTTCATGTTTTTGTCTGTGTTCACATGATTATGGAGCGGTCTTGTTTTTGTCTAAACCACAGTTCTTTTaGAAGAGGAGGTCGCATGTA +
Preference number: 4 (lower is better)
Translates to: SSCFCLCSHDYGAVLFLSKPQFF*KRRSHV
Trigger: TACATGCGACCTCCTCTTTCAAAAGAACTGTGGTTT...AGACAAAAACAAGACCGCTCCATAATCATGTGAACACAGACAAAAACATGAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000675050.1
CDS-3UTR CCA 90 bp GGACAGGAGTTGTTCCAGGTAAACAAAGTCTATTCCATACATTTATTTGTTCACCAAAAACACCAACTGTaGGCAAACTACTGTCCACAA +
Preference number: 4 (lower is better)
Translates to: GQELFQVNKVYSIHLFVHQKHQL*ANYCPQ
Trigger: TTGTGGACAGTAGTTTGCCCACAGTTGGTGTTTTTG...GTGAACAAATAAATGTATGGAATAGACTTTGTTTACCTGGAACAACTCCTGTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
CDS-3UTR TCA 90 bp TCTTCATGTTTTTGTCTGTGTTCACATGATTATGGAGCGGTCTTGTTTTTGTCTTATAAATGGGTCTCTTaGGAAGCTGCTGATTTTCCT +
Preference number: 4 (lower is better)
Translates to: SSCFCLCSHDYGAVLFLSYKWVS*EAADFP
Trigger: AGGAAAATCAGCAGCTTCTCAAGAGACCCATTTATA...AGACAAAAACAAGACCGCTCCATAATCATGTGAACACAGACAAAAACATGAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000675050.1
CDS-3UTR CAA 90 bp CAGCCAAACTGGAGAGGAGCGGGAAAGGGAAGGGGCAGTGGGGGAAGGGAGGGGGGGGCTGCAGTGGGTTaGCCAATTCCACTGTGGGGC +
Preference number: 5 (lower is better)
Translates to: QPNWRGAGKGRGSGGREGGAAVG*PIPLWG
Trigger: GCCCCACAGTGGAATTGGCAAACCCACTGCAGCCCC...CCCCTCCCTTCCCCCACTGCCCCTTCCCTTTCCCGCTCCTCTCCAGTTTGGCTG
66% GC, longest homopolymer 8 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000675050.1
CDS-3UTR CAA 90 bp GTCCTCCCCCTGGACGGGAGCCTGTGGAACTGCCGGGGTGCTGGGAGGAATAGTCATCGCTGGAACAAGTaGCCTGGGAGCCGGTTCCTC +
Preference number: 5 (lower is better)
Translates to: VLPLDGSLWNCRGAGRNSHRWNK*PGSRFL
Trigger: GAGGAACCGGCTCCCAGGCAACTTGTTCCAGCGATG...ACTATTCCTCCCAGCACCCCGGCAGTTCCACAGGCTCCCGTCCAGGGGGAGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000416073.7
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000675037.1
CDS TCA 90 bp CCTCCTTCCCTTTCCTCTCACGCACGACCGACGGGTCAAACACCGTaGGCCCCGGCCAGCTCCCCCAGTCTCTTCACACGCACATTACGC +
Preference number: 5 (lower is better)
Translates to: PPSLSSHARPTGQTP*APASSPSLFTRTLR
Trigger: GCGTAATGTGCGTGTGAAGAGACTGGGGGAGCTGGCCGGGGCTCACGGTGTTTGACCCGTCGGTCGTGCGTGAGAGGAAAGGGAAGGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000287295.8
ENST00000319908.8
ENST00000674546.1
ENST00000675240.1
ENST00000676229.1
CDS CCA 90 bp TCTCTTCACACGCACATTACGCAGACTCCTCCTCCCAGCTCCGGGTaGGCATTGGACAGAGAAGCCGGCCTGCTAGAGCCGGGGAAGGGG +
Preference number: 5 (lower is better)
Translates to: SLHTHITQTPPPSSG*ALDREAGLLEPGKG
Trigger: CCCCTTCCCCGGCTCTAGCAGGCCGGCTTCTCTGTCCAATGCCCACCCGGAGCTGGGAGGAGGAGTCTGCGTAATGTGCGTGTGAAGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287295.8
ENST00000674546.1
ENST00000676229.1
CDS-3UTR CAA 90 bp GTCCTCCCCCTGGACGGGAGCCTGTGGAACTGCCGGGGTGCTGGGAGGAATAGTTTGGCCAACTCAACATaGGGCTCCAGGCCCACAGCT +
Preference number: 5 (lower is better)
Translates to: VLPLDGSLWNCRGAGRNSLANST*GSRPTA
Trigger: AGCTGTGGGCCTGGAGCCCAATGTTGAGTTGGCCAA...ACTATTCCTCCCAGCACCCCGGCAGTTCCACAGGCTCCCGTCCAGGGGGAGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
ENST00000675037.1
CDS-3UTR CAA 90 bp GTCCTCCCCCTGGACGGGAGCCTGTGGAACTGCCGGGGTGCTGGGAGGAATAGTTCCAGGCCACCAGTCTaGGCCAACTCAACATTGGGC +
Preference number: 5 (lower is better)
Translates to: VLPLDGSLWNCRGAGRNSSRPPV*ANSTLG
Trigger: GCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGA...ACTATTCCTCCCAGCACCCCGGCAGTTCCACAGGCTCCCGTCCAGGGGGAGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
ENST00000675037.1
CDS-3UTR CAA 90 bp CTCCCCCTGGACGGGAGCCTGTGGAACTGCCGGGGTGCTGGGAGGAATAGTAATGGGGCTGCAGTGGGTTaGCCAATTCCACTGTGGGGC +
Preference number: 5 (lower is better)
Translates to: LPLDGSLWNCRGAGRNSNGAAVG*PIPLWG
Trigger: GCCCCACAGTGGAATTGGCAAACCCACTGCAGCCCC...ATTACTATTCCTCCCAGCACCCCGGCAGTTCCACAGGCTCCCGTCCAGGGGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
ENST00000675037.1
CDS-3UTR CAA 90 bp GTCCTCCCCCTGGACGGGAGCCTGTGGAACTGCCGGGGTGCTGGGAGGAATAGTACTTGGCGCCTTGTCTaGAGGAACTTCCTCTCCTTC +
Preference number: 5 (lower is better)
Translates to: VLPLDGSLWNCRGAGRNSTWRLV*RNFLSF
Trigger: GAAGGAGAGGAAGTTCCTCAAGACAAGGCGCCAAGT...ACTATTCCTCCCAGCACCCCGGCAGTTCCACAGGCTCCCGTCCAGGGGGAGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
ENST00000675037.1
CDS-3UTR CAA 90 bp GTCCTCCCCCTGGACGGGAGCCTGTGGAACTGCCGGGGTGCTGGGAGGAATAGTTTTTCCATGGTCCAGTaGCTGAGGTATTCGGGGAGG +
Preference number: 5 (lower is better)
Translates to: VLPLDGSLWNCRGAGRNSFSMVQ*LRYSGR
Trigger: CCTCCCCGAATACCTCAGCAACTGGACCATGGAAAA...ACTATTCCTCCCAGCACCCCGGCAGTTCCACAGGCTCCCGTCCAGGGGGAGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
ENST00000675037.1
CDS-3UTR CAA 90 bp CTCCCCCTGGACGGGAGCCTGTGGAACTGCCGGGGTGCTGGGAGGAATAGTAATTTGGCCAACTCAACATaGGGCTCCAGGCCCACAGCT +
Preference number: 5 (lower is better)
Translates to: LPLDGSLWNCRGAGRNSNLANST*GSRPTA
Trigger: AGCTGTGGGCCTGGAGCCCAATGTTGAGTTGGCCAA...ATTACTATTCCTCCCAGCACCCCGGCAGTTCCACAGGCTCCCGTCCAGGGGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
ENST00000675037.1
CDS-3UTR CAA 90 bp GTCCTCCCCCTGGACGGGAGCCTGTGGAACTGCCGGGGTGCTGGGAGGAATAGTGGAAAGGAACATGACTaGGCGCCTTGTCTTGAGGAA +
Preference number: 5 (lower is better)
Translates to: VLPLDGSLWNCRGAGRNSGKEHD*APCLEE
Trigger: TTCCTCAAGACAAGGCGCCAAGTCATGTTCCTTTCC...ACTATTCCTCCCAGCACCCCGGCAGTTCCACAGGCTCCCGTCCAGGGGGAGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
ENST00000675037.1
CDS-3UTR CAA 90 bp GTCCTCCCCCTGGACGGGAGCCTGTGGAACTGCCGGGGTGCTGGGAGGAATAGTGATTGCACAATAGCATaGGGCATCACCTTAACCCCC +
Preference number: 5 (lower is better)
Translates to: VLPLDGSLWNCRGAGRNSDCTIA*GITLTP
Trigger: GGGGGTTAAGGTGATGCCCAATGCTATTGTGCAATC...ACTATTCCTCCCAGCACCCCGGCAGTTCCACAGGCTCCCGTCCAGGGGGAGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
ENST00000675037.1
CDS-3UTR CAA 90 bp CAGCCAAACTGGAGAGGAGCGGGAAAGGGAAGGGGCAGTGGGGGAAGGGAGGGGAGGCTGAAGCCACAATaGGTAAGGAAGCAGCAGCTA +
Preference number: 5 (lower is better)
Translates to: QPNWRGAGKGRGSGGREGRLKPQ*VRKQQL
Trigger: TAGCTGCTGCTTCCTTACCAATTGTGGCTTCAGCCT...CCCCTCCCTTCCCCCACTGCCCCTTCCCTTTCCCGCTCCTCTCCAGTTTGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000675050.1
CDS-3UTR CAA 90 bp CTCCCCCTGGACGGGAGCCTGTGGAACTGCCGGGGTGCTGGGAGGAATAGTAATACTTGGCGCCTTGTCTaGAGGAACTTCCTCTCCTTC +
Preference number: 5 (lower is better)
Translates to: LPLDGSLWNCRGAGRNSNTWRLV*RNFLSF
Trigger: GAAGGAGAGGAAGTTCCTCAAGACAAGGCGCCAAGT...ATTACTATTCCTCCCAGCACCCCGGCAGTTCCACAGGCTCCCGTCCAGGGGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
ENST00000675037.1
CDS-3UTR CAA 90 bp TTTCCTTCAAGGAAGCAGCCTGCAGTAGGTCACTGTGGAGTCCCACCCCCAGCCTTGGCCAACTCAACATaGGGCTCCAGGCCCACAGCT +
Preference number: 5 (lower is better)
Translates to: FPSRKQPAVGHCGVPPPALANST*GSRPTA
Trigger: AGCTGTGGGCCTGGAGCCCAATGTTGAGTTGGCCAA...GGCTGGGGGTGGGACTCCACAGTGACCTACTGCAGGCTGCTTCCTTGAAGGAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675050.1
CDS-3UTR CAA 90 bp CTCCCCCTGGACGGGAGCCTGTGGAACTGCCGGGGTGCTGGGAGGAATAGTAATGGAAAGGAACATGACTaGGCGCCTTGTCTTGAGGAA +
Preference number: 5 (lower is better)
Translates to: LPLDGSLWNCRGAGRNSNGKEHD*APCLEE
Trigger: TTCCTCAAGACAAGGCGCCAAGTCATGTTCCTTTCC...ATTACTATTCCTCCCAGCACCCCGGCAGTTCCACAGGCTCCCGTCCAGGGGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
ENST00000675037.1
CDS-3UTR CAA 90 bp CTCCCCCTGGACGGGAGCCTGTGGAACTGCCGGGGTGCTGGGAGGAATAGTAATGATTGCACAATAGCATaGGGCATCACCTTAACCCCC +
Preference number: 5 (lower is better)
Translates to: LPLDGSLWNCRGAGRNSNDCTIA*GITLTP
Trigger: GGGGGTTAAGGTGATGCCCAATGCTATTGTGCAATC...ATTACTATTCCTCCCAGCACCCCGGCAGTTCCACAGGCTCCCGTCCAGGGGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
ENST00000675037.1
CDS-3UTR CAA 90 bp TCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCAGGCATCGCTGGAACAAGTaGCCTGGGAGCCGGTTCCTC +
Preference number: 5 (lower is better)
Translates to: SESISRPPVLANSTLGSRHRWNK*PGSRFL
Trigger: GAGGAACCGGCTCCCAGGCAACTTGTTCCAGCGATG...CCTGGAGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
CDS-3UTR CAA 90 bp GTCCTCCCCCTGGACGGGAGCCTGTGGAACTGCCGGGGTGCTGGGAGGAATAGTAAAACCACAGTTCTTTaGAAAGAGGAGGTCGCATGT +
Preference number: 5 (lower is better)
Translates to: VLPLDGSLWNCRGAGRNSKTTVL*KEEVAC
Trigger: ACATGCGACCTCCTCTTTCAAAAGAACTGTGGTTTT...ACTATTCCTCCCAGCACCCCGGCAGTTCCACAGGCTCCCGTCCAGGGGGAGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
ENST00000675037.1
CDS-3UTR CAA 90 bp TGCCCAAGGCTCGAGAGGACAGTGGGCATGAGGGCCTCGGTGCTCAAGTTCATTTTTTCCATGGTCCAGTaGCTGAGGTATTCGGGGAGG +
Preference number: 5 (lower is better)
Translates to: CPRLERTVGMRASVLKFIFSMVQ*LRYSGR
Trigger: CCTCCCCGAATACCTCAGCAACTGGACCATGGAAAA...AATGAACTTGAGCACCGAGGCCCTCATGCCCACTGTCCTCTCGAGCCTTGGGCA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000527892.5
ENST00000535724.6
CDS-3UTR CAA 90 bp TCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCAGGCCCACATTGGCCAACTCAACATaGGGCTCCAGGCCCACAGCT +
Preference number: 5 (lower is better)
Translates to: SISRPPVLANSTLGSRPTLANST*GSRPTA
Trigger: AGCTGTGGGCCTGGAGCCCAATGTTGAGTTGGCCAA...TGTGGGCCTGGAGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
CDS-3UTR CAA 90 bp CTCCCCCTGGACGGGAGCCTGTGGAACTGCCGGGGTGCTGGGAGGAATAGTAATGTGGCAGATTTGGGGTaGTCTTGTGCAGTTGCTTTT +
Preference number: 5 (lower is better)
Translates to: LPLDGSLWNCRGAGRNSNVADLG*SCAVAF
Trigger: AAAAGCAACTGCACAAGACAACCCCAAATCTGCCAC...ATTACTATTCCTCCCAGCACCCCGGCAGTTCCACAGGCTCCCGTCCAGGGGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
ENST00000675037.1
CDS-3UTR CAA 90 bp GTCCTCCCCCTGGACGGGAGCCTGTGGAACTGCCGGGGTGCTGGGAGGAATAGTAGTTTGGCTACTTCATaGAGATCTTCATGCTGCTCA +
Preference number: 5 (lower is better)
Translates to: VLPLDGSLWNCRGAGRNSSLATS*RSSCCS
Trigger: TGAGCAGCATGAAGATCTCAATGAAGTAGCCAAACT...ACTATTCCTCCCAGCACCCCGGCAGTTCCACAGGCTCCCGTCCAGGGGGAGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
ENST00000675037.1
CDS-3UTR CAA 90 bp CAGCCAAACTGGAGAGGAGCGGGAAAGGGAAGGGGCAGTGGGGGAAGGGAGGGGCAGCAAATGTTCATTTaGAGAGGATCTCTGGTTTCC +
Preference number: 5 (lower is better)
Translates to: QPNWRGAGKGRGSGGREGQQMFI*RGSLVS
Trigger: GGAAACCAGAGATCCTCTCAAAATGAACATTTGCTG...CCCCTCCCTTCCCCCACTGCCCCTTCCCTTTCCCGCTCCTCTCCAGTTTGGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000675050.1
CDS-3UTR CAA 90 bp CGTAGAACCAGCCAGGCAGGGGAACGTCATCACTGGCTTGGGCTGAGTGTATCTACTTGGCGCCTTGTCTaGAGGAACTTCCTCTCCTTC +
Preference number: 5 (lower is better)
Translates to: RRTSQAGERHHWLGLSVSTWRLV*RNFLSF
Trigger: GAAGGAGAGGAAGTTCCTCAAGACAAGGCGCCAAGT...AGATACACTCAGCCCAAGCCAGTGATGACGTTCCCCTGCCTGGCTGGTTCTACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675050.1
CDS-3UTR CAA 90 bp CACATCCAGCTGTACTACCTTCTTCCCAGTGAGGACAGCCACACCACCATTCTCTTGGCCAACTCAACATaGGGCTCCAGGCCCACAGCT +
Preference number: 5 (lower is better)
Translates to: HIQLYYLLPSEDSHTTILLANST*GSRPTA
Trigger: AGCTGTGGGCCTGGAGCCCAATGTTGAGTTGGCCAA...GAGAATGGTGGTGTGGCTGTCCTCACTGGGAAGAAGGTAGTACAGCTGGATGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527892.5
ENST00000674555.1
ENST00000674997.1
CDS-3UTR CAA 90 bp CTGCTTCCAGGAAGTCATGGGCTAGCAGGGAGACACATACACAAGGATGAGGCTTTGGCCAACTCAACATaGGGCTCCAGGCCCACAGCT +
Preference number: 5 (lower is better)
Translates to: LLPGSHGLAGRHIHKDEALANST*GSRPTA
Trigger: AGCTGTGGGCCTGGAGCCCAATGTTGAGTTGGCCAA...AGCCTCATCCTTGTGTATGTGTCTCCCTGCTAGCCCATGACTTCCTGGAAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
CDS-3UTR CAA 90 bp GTCTTCAGAGATAGTGAACTTCCTGAGAGGAGAGGAGGGGAGTCAAGTGTTGTGGGGGCTGCAGTGGGTTaGCCAATTCCACTGTGGGGC +
Preference number: 5 (lower is better)
Translates to: VFRDSELPERRGGESSVVGAAVG*PIPLWG
Trigger: GCCCCACAGTGGAATTGGCAAACCCACTGCAGCCCC...CACAACACTTGACTCCCCTCCTCTCCTCTCAGGAAGTTCACTATCTCTGAAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
CDS-3UTR CAA 90 bp GGCCTGTTCTCCCAGTGTTCAGAAGGGATTTGGTTGAAGCTGAAACTGCCCTTAGAGGGGAGTCAAGTGTaGTGGGCCGAGGCCACAGCA +
Preference number: 5 (lower is better)
Translates to: GLFSQCSEGIWLKLKLPLEGSQV*WAEATA
Trigger: TGCTGTGGCCTCGGCCCACAACACTTGACTCCCCTC...TAAGGGCAGTTTCAGCTTCAACCAAATCCCTTCTGAACACTGGGAGAACAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676229.1
CDS TCA 90 bp AGAGCTGCAATCCAGGCCGAGCGCCCACTTACAGGACAGTGGGCATaGGGGCCTCGGTGCTCAAGTTCATTTGTAACGCAAATACAACAG +
Preference number: 5 (lower is better)
Translates to: RAAIQAERPLTGQWA*GPRCSSSFVTQIQQ
Trigger: CTGTTGTATTTGCGTTACAAATGAACTTGAGCACCGAGGCCCTCATGCCCACTGTCCTGTAAGTGGGCGCTCGGCCTGGATTGCAGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460436.6
ENST00000675015.1
CDS-3UTR CAA 90 bp CTCCCCCTGGACGGGAGCCTGTGGAACTGCCGGGGTGCTGGGAGGAATAGTAATTTGGAGTACCTCCTGTaGCAATCAAGCACTTTTCAT +
Preference number: 5 (lower is better)
Translates to: LPLDGSLWNCRGAGRNSNLEYLL*QSSTFH
Trigger: ATGAAAAGTGCTTGATTGCAACAGGAGGTACTCCAA...ATTACTATTCCTCCCAGCACCCCGGCAGTTCCACAGGCTCCCGTCCAGGGGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674957.1
ENST00000674997.1
ENST00000675037.1
CDS-3UTR CAA 90 bp CTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCAGGCTTTTCCATGGTCCAGTaGCTGAGGTATTCGGGGAGG +
Preference number: 5 (lower is better)
Translates to: LSLFPGHQSWPTQHWAPGFSMVQ*LRYSGR
Trigger: CCTCCCCGAATACCTCAGCAACTGGACCATGGAAAA...GCCTGGAGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
CDS-3UTR CAA 90 bp CACCATGTTGTCTCTCACATCCAGCTGTACTACCTTCTTCCCAGTGAGGACAGCTCCAGGCCACCAGTCTaGGCCAACTCAACATTGGGC +
Preference number: 5 (lower is better)
Translates to: HHVVSHIQLYYLLPSEDSSRPPV*ANSTLG
Trigger: GCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGA...GCTGTCCTCACTGGGAAGAAGGTAGTACAGCTGGATGTGAGAGACAACATGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527892.5
ENST00000674555.1
ENST00000674997.1
CDS-3UTR CAA 90 bp GATGTCTGGCATGAGGACAGCAGGCAGAAGAGTCAAGAGATGATGGTCCTTCCATCCAGGCCACCAGTCTaGGCCAACTCAACATTGGGC +
Preference number: 5 (lower is better)
Translates to: DVWHEDSRQKSQEMMVLPSRPPV*ANSTLG
Trigger: GCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGA...TGGAAGGACCATCATCTCTTGACTCTTCTGCCTGCTGTCCTCATGCCAGACATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
CDS-3UTR CAA 90 bp GATGATGGTCCTTCCATGAGTCCGTCTCCAGGTTTAACTGTGAAGCACCAGGTCTCCAGGCCACCAGTCTaGGCCAACTCAACATTGGGC +
Preference number: 5 (lower is better)
Translates to: DDGPSMSPSPGLTVKHQVSRPPV*ANSTLG
Trigger: GCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGA...GACCTGGTGCTTCACAGTTAAACCTGGAGACGGACTCATGGAAGGACCATCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
CDS-3UTR CAA 90 bp CTCCCCCTGGACGGGAGCCTGTGGAACTGCCGGGGTGCTGGGAGGAATAGTAATAGTTTGGCTACTTCATaGAGATCTTCATGCTGCTCA +
Preference number: 5 (lower is better)
Translates to: LPLDGSLWNCRGAGRNSNSLATS*RSSCCS
Trigger: TGAGCAGCATGAAGATCTCAATGAAGTAGCCAAACT...ATTACTATTCCTCCCAGCACCCCGGCAGTTCCACAGGCTCCCGTCCAGGGGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
ENST00000675037.1
CDS-3UTR CAA 90 bp CGAGTCCCAACAATCTCTAGGGCAGCAAGGGTGCCTGGCTTTAGGTGGAGTCAGGGAGCGGTCTTGTTTTaGTCTCAATCCACCATGGTC +
Preference number: 5 (lower is better)
Translates to: RVPTISRAARVPGFRWSQGAVLF*SQSTMV
Trigger: GACCATGGTGGATTGAGACAAAAACAAGACCGCTCC...CTGACTCCACCTAAAGCCAGGCACCCTTGCTGCCCTAGAGATTGTTGGGACTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675050.1
CDS-3UTR CAA 90 bp CGAGTCCCAACAATCTCTAGGGCAGCAAGGGTGCCTGGCTTTAGGTGGAGTCAGGTTGGGTCAGGGGATTaGGAGGAAGGTTTAAGGAAG +
Preference number: 5 (lower is better)
Translates to: RVPTISRAARVPGFRWSQVGSGD*EEGLRK
Trigger: CTTCCTTAAACCTTCCTCCAAATCCCCTGACCCAAC...CTGACTCCACCTAAAGCCAGGCACCCTTGCTGCCCTAGAGATTGTTGGGACTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675050.1
CDS-3UTR CAA 90 bp CTCACATCCAGCTGTACTACCTTCTTCCCAGTGAGGACAGCCACACCACCATTCACTTGGCGCCTTGTCTaGAGGAACTTCCTCTCCTTC +
Preference number: 5 (lower is better)
Translates to: LTSSCTTFFPVRTATPPFTWRLV*RNFLSF
Trigger: GAAGGAGAGGAAGTTCCTCAAGACAAGGCGCCAAGT...GAATGGTGGTGTGGCTGTCCTCACTGGGAAGAAGGTAGTACAGCTGGATGTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527892.5
ENST00000674555.1
ENST00000674997.1
ENST00000675774.1
ENST00000676144.1
CDS-3UTR CAA 90 bp GTGTCTGTGCCCGCCAGGAATTCCCTGATAAGATGGGAAAGAGACCAGAGGCAGGGAAAGGAACATGACTaGGCGCCTTGTCTTGAGGAA +
Preference number: 5 (lower is better)
Translates to: VSVPARNSLIRWERDQRQGKEHD*APCLEE
Trigger: TTCCTCAAGACAAGGCGCCAAGTCATGTTCCTTTCC...CTGCCTCTGGTCTCTTTCCCATCTTATCAGGGAATTCCTGGCGGGCACAGACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675050.1
CDS-3UTR CAA 90 bp CACATCCAGCTGTACTACCTTCTTCCCAGTGAGGACAGCCACACCACCATTCTCTTTTCCATGGTCCAGTaGCTGAGGTATTCGGGGAGG +
Preference number: 5 (lower is better)
Translates to: HIQLYYLLPSEDSHTTILFSMVQ*LRYSGR
Trigger: CCTCCCCGAATACCTCAGCAACTGGACCATGGAAAA...GAGAATGGTGGTGTGGCTGTCCTCACTGGGAAGAAGGTAGTACAGCTGGATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000527892.5
ENST00000674555.1
ENST00000674997.1
ENST00000676144.1
CDS-3UTR CAA 90 bp CTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCAGGCGATTGCACAATAGCATaGGGCATCACCTTAACCCCC +
Preference number: 5 (lower is better)
Translates to: LSLFPGHQSWPTQHWAPGDCTIA*GITLTP
Trigger: GGGGGTTAAGGTGATGCCCAATGCTATTGTGCAATC...GCCTGGAGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
CDS-3UTR CAA 90 bp TCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCAGGCCCACAGATTGCACAATAGCATaGGGCATCACCTTAACCCCC +
Preference number: 5 (lower is better)
Translates to: SISRPPVLANSTLGSRPTDCTIA*GITLTP
Trigger: GGGGGTTAAGGTGATGCCCAATGCTATTGTGCAATC...TGTGGGCCTGGAGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
CDS-3UTR CAA 90 bp CCAAAATCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTTGGCCAACTCAACATaGGGCTCCAGGCCCACAGCT +
Preference number: 5 (lower is better)
Translates to: PKSESISRPPVLANSTLGLANST*GSRPTA
Trigger: AGCTGTGGGCCTGGAGCCCAATGTTGAGTTGGCCAA...GCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGATTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
CDS-3UTR CAA 90 bp CCAAAATCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCAGGCCACCAGTCTaGGCCAACTCAACATTGGGC +
Preference number: 5 (lower is better)
Translates to: PKSESISRPPVLANSTLGSRPPV*ANSTLG
Trigger: GCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGA...GCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGATTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
CDS-3UTR CAA 90 bp AACACCAACTGTGGGCAAACTACTGTCCACAAGACCAATAGCTTCATAGCCAACGGGGCTGCAGTGGGTTaGCCAATTCCACTGTGGGGC +
Preference number: 5 (lower is better)
Translates to: NTNCGQTTVHKTNSFIANGAAVG*PIPLWG
Trigger: GCCCCACAGTGGAATTGGCAAACCCACTGCAGCCCC...GTTGGCTATGAAGCTATTGGTCTTGTGGACAGTAGTTTGCCCACAGTTGGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
ENST00000675037.1
CDS-3UTR CAA 90 bp GCCACAGCAGGTGTGTGCAAAGAGGTCTGGAGGGGTGAGGGAAGTTCGGAAATGAGAAAAATCCTGTGCTaGGTCGGTGCTGCAATTTGC +
Preference number: 5 (lower is better)
Translates to: ATAGVCKEVWRGEGSSEMRKILC*VGAAIC
Trigger: GCAAATTGCAGCACCGACCAAGCACAGGATTTTTCT...CATTTCCGAACTTCCCTCACCCCTCCAGACCTCTTTGCACACACCTGCTGTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
CDS-3UTR CAA 90 bp CAGCAGGCAGAAGAGTCAAGAGATGATGGTCCTTCCATGAGTCCGTCTCCAGGTAGGCAGCAGAATCACTaGAATCCGGGAGGTAGAGGT +
Preference number: 5 (lower is better)
Translates to: QQAEESRDDGPSMSPSPGRQQNH*NPGGRG
Trigger: ACCTCTACCTCCCGGATTCAAGTGATTCTGCTGCCT...ACCTGGAGACGGACTCATGGAAGGACCATCATCTCTTGACTCTTCTGCCTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676229.1
CDS CCA 90 bp CAGCTAAATAACTACTCAGCCCAGTTCCTCCCTGCGCAGGACCCATaGAGGATAGCCAGTCTTAAGCTAAGCCTATCAGGCCGTGTTCTT +
Preference number: 5 (lower is better)
Translates to: QLNNYSAQFLPAQDP*RIASLKLSLSGRVL
Trigger: AAGAACACGGCCTGATAGGCTTAGCTTAAGACTGGCTATCCTCCATGGGTCCTGCGCAGGGAGGAACTGGGCTGAGTAGTTATTTAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674582.1
CDS-3UTR CAA 90 bp AACACCAACTGTGGGCAAACTACTGTCCACAAGACCAATAGCTTCATAGCCAACCATCGCTGGAACAAGTaGCCTGGGAGCCGGTTCCTC +
Preference number: 5 (lower is better)
Translates to: NTNCGQTTVHKTNSFIANHRWNK*PGSRFL
Trigger: GAGGAACCGGCTCCCAGGCAACTTGTTCCAGCGATG...GTTGGCTATGAAGCTATTGGTCTTGTGGACAGTAGTTTGCCCACAGTTGGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416073.7
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000675037.1
CDS-3UTR CAA 90 bp CACCATGTTGTCTCTCACATCCAGCTGTACTACCTTCTTCCCAGTGAGGACAGCACTTGGCGCCTTGTCTaGAGGAACTTCCTCTCCTTC +
Preference number: 5 (lower is better)
Translates to: HHVVSHIQLYYLLPSEDSTWRLV*RNFLSF
Trigger: GAAGGAGAGGAAGTTCCTCAAGACAAGGCGCCAAGT...GCTGTCCTCACTGGGAAGAAGGTAGTACAGCTGGATGTGAGAGACAACATGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527892.5
ENST00000674555.1
ENST00000674997.1
ENST00000675774.1
ENST00000676144.1
CDS-3UTR CAA 90 bp TCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCAGGGGAAAGGAACATGACTaGGCGCCTTGTCTTGAGGAA +
Preference number: 5 (lower is better)
Translates to: SESISRPPVLANSTLGSRGKEHD*APCLEE
Trigger: TTCCTCAAGACAAGGCGCCAAGTCATGTTCCTTTCC...CCTGGAGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
CDS-3UTR CAA 90 bp GCAGGTGTGTGCAAAGAGGTCTGGAGGGGTGAGGGAAGTTCGGAAATGAAAGGAGGAAAGGAACATGACTaGGCGCCTTGTCTTGAGGAA +
Preference number: 5 (lower is better)
Translates to: AGVCKEVWRGEGSSEMKGGKEHD*APCLEE
Trigger: TTCCTCAAGACAAGGCGCCAAGTCATGTTCCTTTCC...TCCTTTCATTTCCGAACTTCCCTCACCCCTCCAGACCTCTTTGCACACACCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
CDS-3UTR CAA 90 bp CAAAATCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTTCCAGGCCACCAGTCTaGGCCAACTCAACATTGGGC +
Preference number: 5 (lower is better)
Translates to: QNLSLFPGHQSWPTQHWASRPPV*ANSTLG
Trigger: GCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGA...AGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGATTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
CDS-3UTR CAA 90 bp CTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCAGGCGTGGCAGATTTGGGGTaGTCTTGTGCAGTTGCTTTT +
Preference number: 5 (lower is better)
Translates to: LSLFPGHQSWPTQHWAPGVADLG*SCAVAF
Trigger: AAAAGCAACTGCACAAGACAACCCCAAATCTGCCAC...GCCTGGAGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
CDS-3UTR CAA 90 bp ATGTGGTCAGTTTCTACCTTCCTGCCGTCTTTCAGCTTGATAAGTAACTTGCCAGGGGCTGCAGTGGGTTaGCCAATTCCACTGTGGGGC +
Preference number: 5 (lower is better)
Translates to: MWSVSTFLPSFSLISNLPGAAVG*PIPLWG
Trigger: GCCCCACAGTGGAATTGGCAAACCCACTGCAGCCCC...TGGCAAGTTACTTATCAAGCTGAAAGACGGCAGGAAGGTAGAAACTGACCACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674997.1
CDS-3UTR CAA 90 bp GCCACAGCAGGTGTGTGCAAAGAGGTCTGGAGGGGTGAGGGAAGTTCGGAAATGAAGAAGTACACTAGGTaGCTGCCATCTTTCCCAGAA +
Preference number: 5 (lower is better)
Translates to: ATAGVCKEVWRGEGSSEMKKYTR*LPSFPE
Trigger: TTCTGGGAAAGATGGCAGCAACCTAGTGTACTTCTT...CATTTCCGAACTTCCCTCACCCCTCCAGACCTCTTTGCACACACCTGCTGTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676229.1
CDS-3UTR CAA 90 bp TCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCAGGCACCCACCTGCCCCCTaGACAAGAGAACAGAATTTA +
Preference number: 5 (lower is better)
Translates to: SESISRPPVLANSTLGSRHPPAP*TREQNL
Trigger: TAAATTCTGTTCTCTTGTCAAGGGGGCAGGTGGGTG...CCTGGAGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674957.1
CDS-3UTR CAA 90 bp GCAGGTGTGTGCAAAGAGGTCTGGAGGGGTGAGGGAAGTTCGGAAATGAAAGGACACCCACCTGCCCCCTaGACAAGAGAACAGAATTTA +
Preference number: 5 (lower is better)
Translates to: AGVCKEVWRGEGSSEMKGHPPAP*TREQNL
Trigger: TAAATTCTGTTCTCTTGTCAAGGGGGCAGGTGGGTG...TCCTTTCATTTCCGAACTTCCCTCACCCCTCCAGACCTCTTTGCACACACCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
CDS-3UTR CAA 90 bp CTCACATCCAGCTGTACTACCTTCTTCCCAGTGAGGACAGCCACACCACCATTCGTCTCAGATGATTCTTaGCCACAGATAACGCGGCCT +
Preference number: 5 (lower is better)
Translates to: LTSSCTTFFPVRTATPPFVSDDS*PQITRP
Trigger: AGGCCGCGTTATCTGTGGCAAAGAATCATCTGAGAC...GAATGGTGGTGTGGCTGTCCTCACTGGGAAGAAGGTAGTACAGCTGGATGTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675774.1
ENST00000676144.1
CDS-3UTR CAA 90 bp CACCATGTTGTCTCTCACATCCAGCTGTACTACCTTCTTCCCAGTGAGGACAGCTCAGGTGACAGCTTTTaGGTCACCAAGGGATCCCTC +
Preference number: 5 (lower is better)
Translates to: HHVVSHIQLYYLLPSEDSSGDSF*VTKGSL
Trigger: GAGGGATCCCTTGGTGACCAAAAAGCTGTCACCTGA...GCTGTCCTCACTGGGAAGAAGGTAGTACAGCTGGATGTGAGAGACAACATGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675774.1
CDS CCA 90 bp ACAAGCCCCTCTGGCCAATACAGAAACCCCTTGTTCAGGAGAATCTaGACCACTGCTTCTCAACACTCTCCAAGAGGAGTGCTAGGACTT +
Preference number: 5 (lower is better)
Translates to: TSPSGQYRNPLFRRI*TTASQHSPRGVLGL
Trigger: AAGTCCTAGCACTCCTCTTGGAGAGTGTTGAGAAGCAGTGGTCCAGATTCTCCTGAACAAGGGGTTTCTGTATTGGCCAGAGGGGCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674582.1
CDS-3UTR CAA 90 bp ATCCTCTTTCATAGTCTTGTAGGCATAATAAACTCCTGCCCCAGTGACTGTTGCCATCGCTGGAACAAGTaGCCTGGGAGCCGGTTCCTC +
Preference number: 5 (lower is better)
Translates to: ILFHSLVGIINSCPSDCCHRWNK*PGSRFL
Trigger: GAGGAACCGGCTCCCAGGCAACTTGTTCCAGCGATG...GCAACAGTCACTGGGGCAGGAGTTTATTATGCCTACAAGACTATGAAAGAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529877.1
CDS-3UTR CAA 90 bp CAGTCACCTAAGGCTTACATAAGTGCTTTGCAACCTCTGAATAGGAAGCATCCTCATCGCTGGAACAAGTaGCCTGGGAGCCGGTTCCTC +
Preference number: 5 (lower is better)
Translates to: QSPKAYISALQPLNRKHPHRWNK*PGSRFL
Trigger: GAGGAACCGGCTCCCAGGCAACTTGTTCCAGCGATG...AGGATGCTTCCTATTCAGAGGTTGCAAAGCACTTATGTAAGCCTTAGGTGACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535724.6
CDS-3UTR CAA 90 bp AATCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCAACTTGGCGCCTTGTCTaGAGGAACTTCCTCTCCTTC +
Preference number: 5 (lower is better)
Translates to: NLSLFPGHQSWPTQHWAPTWRLV*RNFLSF
Trigger: GAAGGAGAGGAAGTTCCTCAAGACAAGGCGCCAAGT...TGGAGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
CDS-3UTR CAA 90 bp CACCATGTTGTCTCTCACATCCAGCTGTACTACCTTCTTCCCAGTGAGGACAGCGGAAAGGAACATGACTaGGCGCCTTGTCTTGAGGAA +
Preference number: 5 (lower is better)
Translates to: HHVVSHIQLYYLLPSEDSGKEHD*APCLEE
Trigger: TTCCTCAAGACAAGGCGCCAAGTCATGTTCCTTTCC...GCTGTCCTCACTGGGAAGAAGGTAGTACAGCTGGATGTGAGAGACAACATGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527892.5
ENST00000674555.1
ENST00000674997.1
ENST00000675774.1
ENST00000676144.1
CDS-3UTR CAA 90 bp AACACCAACTGTGGGCAAACTACTGTCCACAAGACCAATAGCTTCATAGCCAACTTGGCCAACTCAACATaGGGCTCCAGGCCCACAGCT +
Preference number: 5 (lower is better)
Translates to: NTNCGQTTVHKTNSFIANLANST*GSRPTA
Trigger: AGCTGTGGGCCTGGAGCCCAATGTTGAGTTGGCCAA...GTTGGCTATGAAGCTATTGGTCTTGTGGACAGTAGTTTGCCCACAGTTGGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
ENST00000675037.1
CDS-3UTR CAA 90 bp AACACCAACTGTGGGCAAACTACTGTCCACAAGACCAATAGCTTCATAGCCAACTCCAGGCCACCAGTCTaGGCCAACTCAACATTGGGC +
Preference number: 5 (lower is better)
Translates to: NTNCGQTTVHKTNSFIANSRPPV*ANSTLG
Trigger: GCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGA...GTTGGCTATGAAGCTATTGGTCTTGTGGACAGTAGTTTGCCCACAGTTGGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
ENST00000675037.1
CDS-3UTR CAA 90 bp TACAACAGGTATCAGAACTGCTGGCCCCAGATTAAGCTTCAGATGGTGAACTCTTCCAGGCCACCAGTCTaGGCCAACTCAACATTGGGC +
Preference number: 5 (lower is better)
Translates to: YNRYQNCWPQIKLQMVNSSRPPV*ANSTLG
Trigger: GCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGA...AGAGTTCACCATCTGAAGCTTAATCTGGGGCCAGCAGTTCTGATACCTGTTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527892.5
ENST00000535724.6
CDS-3UTR CAA 90 bp CTAGTCACACCCATACGTAGAACCAGCCAGGCAGGGGAACGTCATCACTGGCTTAAGAAGTACACTAGGTaGCTGCCATCTTTCCCAGAA +
Preference number: 5 (lower is better)
Translates to: LVTPIRRTSQAGERHHWLKKYTR*LPSFPE
Trigger: TTCTGGGAAAGATGGCAGCAACCTAGTGTACTTCTT...AAGCCAGTGATGACGTTCCCCTGCCTGGCTGGTTCTACGTATGGGTGTGACTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675050.1
CDS-3UTR CAA 90 bp CAGATTAAGCTTCAGATGGTGAACTCTGTGCACTTCCACCCATGCAGTCACCTAACTTGGCGCCTTGTCTaGAGGAACTTCCTCTCCTTC +
Preference number: 5 (lower is better)
Translates to: QIKLQMVNSVHFHPCSHLTWRLV*RNFLSF
Trigger: GAAGGAGAGGAAGTTCCTCAAGACAAGGCGCCAAGT...TAGGTGACTGCATGGGTGGAAGTGCACAGAGTTCACCATCTGAAGCTTAATCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527892.5
ENST00000535724.6
CDS-3UTR CAA 90 bp CTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCAGGCAAAACCACAGTTCTTTaGAAAGAGGAGGTCGCATGT +
Preference number: 5 (lower is better)
Translates to: LSLFPGHQSWPTQHWAPGKTTVL*KEEVAC
Trigger: ACATGCGACCTCCTCTTTCAAAAGAACTGTGGTTTT...GCCTGGAGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
CDS-3UTR CAA 90 bp GTGTCTGTGCCCGCCAGGAATTCCCTGATAAGATGGGAAAGAGACCAGAGGCAGTTGGAGTACCTCCTGTaGCAATCAAGCACTTTTCAT +
Preference number: 5 (lower is better)
Translates to: VSVPARNSLIRWERDQRQLEYLL*QSSTFH
Trigger: ATGAAAAGTGCTTGATTGCAACAGGAGGTACTCCAA...CTGCCTCTGGTCTCTTTCCCATCTTATCAGGGAATTCCTGGCGGGCACAGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675050.1
CDS-3UTR CAA 90 bp TTTCACCATGTTGTCTCTCACATCCAGCTGTACTACCTTCTTCCCAGTGAGGACTTTTCCATGGTCCAGTaGCTGAGGTATTCGGGGAGG +
Preference number: 5 (lower is better)
Translates to: FHHVVSHIQLYYLLPSEDFSMVQ*LRYSGR
Trigger: CCTCCCCGAATACCTCAGCAACTGGACCATGGAAAA...GTCCTCACTGGGAAGAAGGTAGTACAGCTGGATGTGAGAGACAACATGGTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000527892.5
ENST00000674555.1
ENST00000674997.1
ENST00000676144.1
CDS-3UTR CAA 90 bp GGAAGGTTTAAGGAAGTCAGGCTTTGTTCTGGACTGGATGCTGGTGATTCTGTGTTTTCCATGGTCCAGTaGCTGAGGTATTCGGGGAGG +
Preference number: 5 (lower is better)
Translates to: GRFKEVRLCSGLDAGDSVFSMVQ*LRYSGR
Trigger: CCTCCCCGAATACCTCAGCAACTGGACCATGGAAAA...CACAGAATCACCAGCATCCAGTCCAGAACAAAGCCTGACTTCCTTAAACCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675050.1
CDS-3UTR CAA 90 bp GGTGCTGCAATTTGCTTGCTTTCTAATATGCGTGGCTTTCCACCTTCACCCACCGATTGCACAATAGCATaGGGCATCACCTTAACCCCC +
Preference number: 5 (lower is better)
Translates to: GAAICLLSNMRGFPPSPTDCTIA*GITLTP
Trigger: GGGGGTTAAGGTGATGCCCAATGCTATTGTGCAATC...GGTGGGTGAAGGTGGAAAGCCACGCATATTAGAAAGCAAGCAAATTGCAGCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
CDS-3UTR CAA 90 bp AACTGCTGGCCCCAGATTAAGCTTCAGATGGTGAACTCTGTGCACTTCCACCCAGTGGCAGATTTGGGGTaGTCTTGTGCAGTTGCTTTT +
Preference number: 5 (lower is better)
Translates to: NCWPQIKLQMVNSVHFHPVADLG*SCAVAF
Trigger: AAAAGCAACTGCACAAGACAACCCCAAATCTGCCAC...TGGGTGGAAGTGCACAGAGTTCACCATCTGAAGCTTAATCTGGGGCCAGCAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527892.5
ENST00000535724.6
CDS GCA 90 bp CACCCGACCAACACCGCACTCTTATGCCAACCAAAGAACTTAGTATaGAGATCACGAGAGATGCCAACTGATCTGCTGTTGCTAGAGCAT +
Preference number: 5 (lower is better)
Translates to: HPTNTALLCQPKNLV*RSREMPTDLLLLEH
Trigger: ATGCTCTAGCAACAGCAGATCAGTTGGCATCTCTCGTGATCTGCATACTAAGTTCTTTGGTTGGCATAAGAGTGCGGTGTTGGTCGGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674591.1
CDS GCA 90 bp CTCTGGCCAATACAGAAACCCCTTGTTCAGGAGAATCTGGACCACTaGTTCTCAACACTCTCCAAGAGGAGTGCTAGGACTTTCTTACCT +
Preference number: 5 (lower is better)
Translates to: LWPIQKPLVQENLDH*FSTLSKRSARTFLP
Trigger: AGGTAAGAAAGTCCTAGCACTCCTCTTGGAGAGTGTTGAGAAGCAGTGGTCCAGATTCTCCTGAACAAGGGGTTTCTGTATTGGCCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674582.1
CDS CCA 90 bp AGGTGCCTCCCATCTAAAGAAAACCTGGCACTAAGATCTGCCAAATaGAATGGGAGGCAGCTAAATAACTACTCAGCCCAGTTCCTCCCT +
Preference number: 5 (lower is better)
Translates to: RCLPSKENLALRSAK*NGRQLNNYSAQFLP
Trigger: AGGGAGGAACTGGGCTGAGTAGTTATTTAGCTGCCTCCCATTCCATTTGGCAGATCTTAGTGCCAGGTTTTCTTTAGATGGGAGGCACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674582.1
CDS CCA 90 bp CTGTACTCACCATGTTTCATGAGCTCAAAAGCCACATGTGGCTGGTaGCTAACGTACTGGACAGAGCAGAGATGGAACATTTCCATCGCA +
Preference number: 5 (lower is better)
Translates to: LYSPCFMSSKATCGW*LTYWTEQRWNISIA
Trigger: TGCGATGGAAATGTTCCATCTCTGCTCTGTCCAGTACGTTAGCCACCAGCCACATGTGGCTTTTGAGCTCATGAAACATGGTGAGTACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674582.1
CDS-3UTR CAA 90 bp ACCAACTGTGGGCAAACTACTGTCCACAAGACCAATAGCTTCATAGCCAACATCACTTGGCGCCTTGTCTaGAGGAACTTCCTCTCCTTC +
Preference number: 5 (lower is better)
Translates to: TNCGQTTVHKTNSFIANITWRLV*RNFLSF
Trigger: GAAGGAGAGGAAGTTCCTCAAGACAAGGCGCCAAGT...GATGTTGGCTATGAAGCTATTGGTCTTGTGGACAGTAGTTTGCCCACAGTTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
ENST00000675037.1
CDS-3UTR CAA 90 bp CCGTCTCCAGGTTTAACTGTGAAGCACCAGGTCTCTGAACTCAGATTTGTAGTAACTTGGCGCCTTGTCTaGAGGAACTTCCTCTCCTTC +
Preference number: 5 (lower is better)
Translates to: PSPGLTVKHQVSELRFVVTWRLV*RNFLSF
Trigger: GAAGGAGAGGAAGTTCCTCAAGACAAGGCGCCAAGT...TACTACAAATCTGAGTTCAGAGACCTGGTGCTTCACAGTTAAACCTGGAGACGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
CDS-3UTR CAA 90 bp CAAAATCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTGGAAAGGAACATGACTaGGCGCCTTGTCTTGAGGAA +
Preference number: 5 (lower is better)
Translates to: QNLSLFPGHQSWPTQHWAGKEHD*APCLEE
Trigger: TTCCTCAAGACAAGGCGCCAAGTCATGTTCCTTTCC...AGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGATTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
CDS-3UTR CAA 90 bp TCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCAGGAAAACCACAGTTCTTTaGAAAGAGGAGGTCGCATGT +
Preference number: 5 (lower is better)
Translates to: SESISRPPVLANSTLGSRKTTVL*KEEVAC
Trigger: ACATGCGACCTCCTCTTTCAAAAGAACTGTGGTTTT...CCTGGAGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
CDS-3UTR CAA 90 bp AACACCAACTGTGGGCAAACTACTGTCCACAAGACCAATAGCTTCATAGCCAACTTTTCCATGGTCCAGTaGCTGAGGTATTCGGGGAGG +
Preference number: 5 (lower is better)
Translates to: NTNCGQTTVHKTNSFIANFSMVQ*LRYSGR
Trigger: CCTCCCCGAATACCTCAGCAACTGGACCATGGAAAA...GTTGGCTATGAAGCTATTGGTCTTGTGGACAGTAGTTTGCCCACAGTTGGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
ENST00000675037.1
CDS-3UTR CAA 90 bp TTTCACCATGTTGTCTCTCACATCCAGCTGTACTACCTTCTTCCCAGTGAGGACGATTGCACAATAGCATaGGGCATCACCTTAACCCCC +
Preference number: 5 (lower is better)
Translates to: FHHVVSHIQLYYLLPSEDDCTIA*GITLTP
Trigger: GGGGGTTAAGGTGATGCCCAATGCTATTGTGCAATC...GTCCTCACTGGGAAGAAGGTAGTACAGCTGGATGTGAGAGACAACATGGTGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527892.5
ENST00000674555.1
ENST00000674997.1
ENST00000676144.1
CDS-3UTR CAA 90 bp GGCCTGTTCTCCCAGTGTTCAGAAGGGATTTGGTTGAAGCTGAAACTGCCCTTAGGTGCTGCAATTTGCTaGCTTTCTAATATGCGTGGC +
Preference number: 5 (lower is better)
Translates to: GLFSQCSEGIWLKLKLPLGAAIC*LSNMRG
Trigger: GCCACGCATATTAGAAAGCAAGCAAATTGCAGCACC...TAAGGGCAGTTTCAGCTTCAACCAAATCCCTTCTGAACACTGGGAGAACAGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676229.1
CDS-3UTR CAA 90 bp GAGGATTCAGGTTGGGTCAGGGGATTTGGAGGAAGGTTTAAGGAAGTCAGGCTTGGTCACAGAGTAGCCTaGTATAATGCTGATGCCCTA +
Preference number: 5 (lower is better)
Translates to: EDSGWVRGFGGRFKEVRLGHRVA*YNADAL
Trigger: TAGGGCATCAGCATTATACAAGGCTACTCTGTGACC...AAGCCTGACTTCCTTAAACCTTCCTCCAAATCCCCTGACCCAACCTGAATCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675050.1
CDS CCA 90 bp TGTTTCATGAGCTCAAAAGCCACATGTGGCTGGTGGCTAACGTACTaGACAGAGCAGAGATGGAACATTTCCATCGCAGCAGAAAGTTCT +
Preference number: 5 (lower is better)
Translates to: CFMSSKATCGWWLTY*TEQRWNISIAAESS
Trigger: AGAACTTTCTGCTGCGATGGAAATGTTCCATCTCTGCTCTGTCCAGTACGTTAGCCACCAGCCACATGTGGCTTTTGAGCTCATGAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674582.1
CDS-3UTR CAA 90 bp ATCCTCTTTCATAGTCTTGTAGGCATAATAAACTCCTGCCCCAGTGACTGTTGCACTTGGCGCCTTGTCTaGAGGAACTTCCTCTCCTTC +
Preference number: 5 (lower is better)
Translates to: ILFHSLVGIINSCPSDCCTWRLV*RNFLSF
Trigger: GAAGGAGAGGAAGTTCCTCAAGACAAGGCGCCAAGT...GCAACAGTCACTGGGGCAGGAGTTTATTATGCCTACAAGACTATGAAAGAGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529877.1
CDS-3UTR CAA 90 bp CCTAAGGCTTACATAAGTGCTTTGCAACCTCTGAATAGGAAGCATCCTCCTGAAACTTGGCGCCTTGTCTaGAGGAACTTCCTCTCCTTC +
Preference number: 5 (lower is better)
Translates to: PKAYISALQPLNRKHPPETWRLV*RNFLSF
Trigger: GAAGGAGAGGAAGTTCCTCAAGACAAGGCGCCAAGT...TTCAGGAGGATGCTTCCTATTCAGAGGTTGCAAAGCACTTATGTAAGCCTTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527892.5
ENST00000535724.6
CDS-3UTR CAA 90 bp ACCAACTGTGGGCAAACTACTGTCCACAAGACCAATAGCTTCATAGCCAACATCGGAAAGGAACATGACTaGGCGCCTTGTCTTGAGGAA +
Preference number: 5 (lower is better)
Translates to: TNCGQTTVHKTNSFIANIGKEHD*APCLEE
Trigger: TTCCTCAAGACAAGGCGCCAAGTCATGTTCCTTTCC...GATGTTGGCTATGAAGCTATTGGTCTTGTGGACAGTAGTTTGCCCACAGTTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
ENST00000675037.1
CDS-3UTR CAA 90 bp CACCATGTTGTCTCTCACATCCAGCTGTACTACCTTCTTCCCAGTGAGGACAGCAAAACCACAGTTCTTTaGAAAGAGGAGGTCGCATGT +
Preference number: 5 (lower is better)
Translates to: HHVVSHIQLYYLLPSEDSKTTVL*KEEVAC
Trigger: ACATGCGACCTCCTCTTTCAAAAGAACTGTGGTTTT...GCTGTCCTCACTGGGAAGAAGGTAGTACAGCTGGATGTGAGAGACAACATGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527892.5
ENST00000674555.1
ENST00000674997.1
ENST00000675774.1
ENST00000676144.1
CDS-3UTR CAA 90 bp CACCATGTTGTCTCTCACATCCAGCTGTACTACCTTCTTCCCAGTGAGGACAGCTTGGAGTACCTCCTGTaGCAATCAAGCACTTTTCAT +
Preference number: 5 (lower is better)
Translates to: HHVVSHIQLYYLLPSEDSLEYLL*QSSTFH
Trigger: ATGAAAAGTGCTTGATTGCAACAGGAGGTACTCCAA...GCTGTCCTCACTGGGAAGAAGGTAGTACAGCTGGATGTGAGAGACAACATGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527892.5
ENST00000674555.1
ENST00000674997.1
ENST00000675774.1
ENST00000676144.1
CDS-3UTR CAA 90 bp ATGTGGTCAGTTTCTACCTTCCTGCCGTCTTTCAGCTTGATAAGTAACTTGCCATTTTCCATGGTCCAGTaGCTGAGGTATTCGGGGAGG +
Preference number: 5 (lower is better)
Translates to: MWSVSTFLPSFSLISNLPFSMVQ*LRYSGR
Trigger: CCTCCCCGAATACCTCAGCAACTGGACCATGGAAAA...TGGCAAGTTACTTATCAAGCTGAAAGACGGCAGGAAGGTAGAAACTGACCACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674997.1
CDS-3UTR CAA 90 bp AACACCAACTGTGGGCAAACTACTGTCCACAAGACCAATAGCTTCATAGCCAACGATTGCACAATAGCATaGGGCATCACCTTAACCCCC +
Preference number: 5 (lower is better)
Translates to: NTNCGQTTVHKTNSFIANDCTIA*GITLTP
Trigger: GGGGGTTAAGGTGATGCCCAATGCTATTGTGCAATC...GTTGGCTATGAAGCTATTGGTCTTGTGGACAGTAGTTTGCCCACAGTTGGTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
ENST00000675037.1
CDS-3UTR CAA 90 bp ATTCAGGTTGGGTCAGGGGATTTGGAGGAAGGTTTAAGGAAGTCAGGCTTTGTTGATTGCACAATAGCATaGGGCATCACCTTAACCCCC +
Preference number: 5 (lower is better)
Translates to: IQVGSGDLEEGLRKSGFVDCTIA*GITLTP
Trigger: GGGGGTTAAGGTGATGCCCAATGCTATTGTGCAATC...AACAAAGCCTGACTTCCTTAAACCTTCCTCCAAATCCCCTGACCCAACCTGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675050.1
CDS-3UTR CAA 90 bp CAGATTAAGCTTCAGATGGTGAACTCTGTGCACTTCCACCCATGCAGTCACCTAGTGGCAGATTTGGGGTaGTCTTGTGCAGTTGCTTTT +
Preference number: 5 (lower is better)
Translates to: QIKLQMVNSVHFHPCSHLVADLG*SCAVAF
Trigger: AAAAGCAACTGCACAAGACAACCCCAAATCTGCCAC...TAGGTGACTGCATGGGTGGAAGTGCACAGAGTTCACCATCTGAAGCTTAATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527892.5
ENST00000535724.6
CDS-3UTR CAA 90 bp CACCATGTTGTCTCTCACATCCAGCTGTACTACCTTCTTCCCAGTGAGGACAGCAGTTTGGCTACTTCATaGAGATCTTCATGCTGCTCA +
Preference number: 5 (lower is better)
Translates to: HHVVSHIQLYYLLPSEDSSLATS*RSSCCS
Trigger: TGAGCAGCATGAAGATCTCAATGAAGTAGCCAAACT...GCTGTCCTCACTGGGAAGAAGGTAGTACAGCTGGATGTGAGAGACAACATGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527892.5
ENST00000674555.1
ENST00000674997.1
CDS-3UTR CAA 90 bp AATCACTTGAATCCGGGAGGTAGAGGTTGTGATGAGCCTAGGTCGCACCATTGCAGTTTGGCTACTTCATaGAGATCTTCATGCTGCTCA +
Preference number: 5 (lower is better)
Translates to: NHLNPGGRGCDEPRSHHCSLATS*RSSCCS
Trigger: TGAGCAGCATGAAGATCTCAATGAAGTAGCCAAACT...GCAATGGTGCGACCTAGGCTCATCACAACCTCTACCTCCCGGATTCAAGTGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676229.1
CDS-3UTR CAA 90 bp TATGCCATGCTTCAGGAAGAGGGCGCTAGAAAAGACTTAGAGGATTCAGGTTGGGTTTCCATCGAGGGCTaGGCAGTCCAGTATCTAAAT +
Preference number: 5 (lower is better)
Translates to: YAMLQEEGARKDLEDSGWVSIEG*AVQYLN
Trigger: ATTTAGATACTGGACTGCCAAGCCCTCGATGGAAAC...CCAACCTGAATCCTCTAAGTCTTTTCTAGCGCCCTCTTCCTGAAGCATGGCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675050.1
CDS-3UTR CAA 90 bp CCAGTGACTGTTGCTCCTACAATTAAGAAGTACACTAGGTTGCTGCCATCTTTCGGAAAGGAACATGACTaGGCGCCTTGTCTTGAGGAA +
Preference number: 5 (lower is better)
Translates to: PVTVAPTIKKYTRLLPSFGKEHD*APCLEE
Trigger: TTCCTCAAGACAAGGCGCCAAGTCATGTTCCTTTCC...GAAAGATGGCAGCAACCTAGTGTACTTCTTAATTGTAGGAGCAACAGTCACTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529877.1
CDS-3UTR CAA 90 bp AATCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCAAAAACCACAGTTCTTTaGAAAGAGGAGGTCGCATGT +
Preference number: 5 (lower is better)
Translates to: NLSLFPGHQSWPTQHWAPKTTVL*KEEVAC
Trigger: ACATGCGACCTCCTCTTTCAAAAGAACTGTGGTTTT...TGGAGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
CDS-3UTR CAA 90 bp GAGGATTCAGGTTGGGTCAGGGGATTTGGAGGAAGGTTTAAGGAAGTCAGGCTTAAAACCACAGTTCTTTaGAAAGAGGAGGTCGCATGT +
Preference number: 5 (lower is better)
Translates to: EDSGWVRGFGGRFKEVRLKTTVL*KEEVAC
Trigger: ACATGCGACCTCCTCTTTCAAAAGAACTGTGGTTTT...AAGCCTGACTTCCTTAAACCTTCCTCCAAATCCCCTGACCCAACCTGAATCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675050.1
CDS-3UTR CAA 90 bp GGCCTGTTCTCCCAGTGTTCAGAAGGGATTTGGTTGAAGCTGAAACTGCCCTTAAAAACCACAGTTCTTTaGAAAGAGGAGGTCGCATGT +
Preference number: 5 (lower is better)
Translates to: GLFSQCSEGIWLKLKLPLKTTVL*KEEVAC
Trigger: ACATGCGACCTCCTCTTTCAAAAGAACTGTGGTTTT...TAAGGGCAGTTTCAGCTTCAACCAAATCCCTTCTGAACACTGGGAGAACAGGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676229.1
CDS-3UTR CAA 90 bp AATCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCATTGGAGTACCTCCTGTaGCAATCAAGCACTTTTCAT +
Preference number: 5 (lower is better)
Translates to: NLSLFPGHQSWPTQHWAPLEYLL*QSSTFH
Trigger: ATGAAAAGTGCTTGATTGCAACAGGAGGTACTCCAA...TGGAGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674957.1
ENST00000674997.1
CDS-3UTR CAA 90 bp AATCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCAAGTTTGGCTACTTCATaGAGATCTTCATGCTGCTCA +
Preference number: 5 (lower is better)
Translates to: NLSLFPGHQSWPTQHWAPSLATS*RSSCCS
Trigger: TGAGCAGCATGAAGATCTCAATGAAGTAGCCAAACT...TGGAGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
CDS-3UTR CAA 90 bp AATCTGAGTCTATTTCCAGGCCACCAGTCTTGGCCAACTCAACATTGGGCTCCAGCTTACATAAGTGCTTaGCAACCTCTGAATAGGAAG +
Preference number: 5 (lower is better)
Translates to: NLSLFPGHQSWPTQHWAPAYISA*QPLNRK
Trigger: CTTCCTATTCAGAGGTTGCAAAGCACTTATGTAAGC...TGGAGCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGAAATAGACTCAGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527892.5
ENST00000535724.6
CDS TCA 90 bp TCCTTAGAAAGGTCTTCCCAGAGACACACAAAACAGCAGTGTCATTaGGCTAGCCACTGTCCACTGTCTAGGACAGATACCCACAATATT +
Preference number: 5 (lower is better)
Translates to: SLERSSQRHTKQQCH*ASHCPLSRTDTHNI
Trigger: AATATTGTGGGTATCTGTCCTAGACAGTGGACAGTGGCTAGCTCAATGACACTGCTGTTTTGTGTGTCTCTGGGAAGACCTTTCTAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674582.1
CDS-3UTR CAA 90 bp ATTTGTAACGCAAATACAACAGGTATCAGAACTGCTGGCCCCAGATTAAGCTTCGGAAAGGAACATGACTaGGCGCCTTGTCTTGAGGAA +
Preference number: 5 (lower is better)
Translates to: ICNANTTGIRTAGPRLSFGKEHD*APCLEE
Trigger: TTCCTCAAGACAAGGCGCCAAGTCATGTTCCTTTCC...GAAGCTTAATCTGGGGCCAGCAGTTCTGATACCTGTTGTATTTGCGTTACAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527892.5
ENST00000535724.6
CDS-3UTR CAA 90 bp CCACCCATGCAGTCACCTAAGGCTTACATAAGTGCTTTGCAACCTCTGAATAGGTTGGAGTACCTCCTGTaGCAATCAAGCACTTTTCAT +
Preference number: 5 (lower is better)
Translates to: PPMQSPKAYISALQPLNRLEYLL*QSSTFH
Trigger: ATGAAAAGTGCTTGATTGCAACAGGAGGTACTCCAA...CCTATTCAGAGGTTGCAAAGCACTTATGTAAGCCTTAGGTGACTGCATGGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527892.5
ENST00000535724.6
CDS-3UTR CAA 90 bp GGACAGGAGTTGTTCCAGGTAAACAAAGTCTATTCCATACATTTATTTGTTCACTTGGCCAACTCAACATaGGGCTCCAGGCCCACAGCT +
Preference number: 5 (lower is better)
Translates to: GQELFQVNKVYSIHLFVHLANST*GSRPTA
Trigger: AGCTGTGGGCCTGGAGCCCAATGTTGAGTTGGCCAA...GTGAACAAATAAATGTATGGAATAGACTTTGTTTACCTGGAACAACTCCTGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
CDS-3UTR CAA 90 bp TCTTCATGTTTTTGTCTGTGTTCACATGATTATGGAGCGGTCTTGTTTTTGTCTTCCAGGCCACCAGTCTaGGCCAACTCAACATTGGGC +
Preference number: 5 (lower is better)
Translates to: SSCFCLCSHDYGAVLFLSSRPPV*ANSTLG
Trigger: GCCCAATGTTGAGTTGGCCAAGACTGGTGGCCTGGA...AGACAAAAACAAGACCGCTCCATAATCATGTGAACACAGACAAAAACATGAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000675050.1
CDS-3UTR CAA 90 bp CAGATTAAGCTTCAGATGGTGAACTCTGTGCACTTCCACCCATGCAGTCACCTAAGTTTGGCTACTTCATaGAGATCTTCATGCTGCTCA +
Preference number: 5 (lower is better)
Translates to: QIKLQMVNSVHFHPCSHLSLATS*RSSCCS
Trigger: TGAGCAGCATGAAGATCTCAATGAAGTAGCCAAACT...TAGGTGACTGCATGGGTGGAAGTGCACAGAGTTCACCATCTGAAGCTTAATCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527892.5
ENST00000535724.6
CDS-3UTR CAA 90 bp GATAAAACCATGAGCAAGGCCTTAACATCAGGGCTTCTGCTTCCAGGAAGTCATTCAGAAGGGATTTGGTaGAAGCTGAAACTGCCCTTA +
Preference number: 5 (lower is better)
Translates to: DKTMSKALTSGLLLPGSHSEGIW*KLKLPL
Trigger: TAAGGGCAGTTTCAGCTTCAACCAAATCCCTTCTGA...ATGACTTCCTGGAAGCAGAAGCCCTGATGTTAAGGCCTTGCTCATGGTTTTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676229.1
CDS TCA 90 bp ATGCCAACCAAAGAACTTAGTATGCAGATCACGAGAGATGCCAACTaGTCTGCTGTTGCTAGAGCATCTAGGGATGACCATGAGAAAGTA +
Preference number: 5 (lower is better)
Translates to: MPTKELSMQITRDAN*SAVARASRDDHEKV
Trigger: TACTTTCTCATGGTCATCCCTAGATGCTCTAGCAACAGCAGATCAGTTGGCATCTCTCGTGATCTGCATACTAAGTTCTTTGGTTGGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674591.1
CDS GCA 90 bp ATTCCAACTGGAGCTCACAGATCTCTCAAGCTGGGAACCATCATGTaGCCAAAGAAGTTTTTGGCATTTTACAGGAAGCAGCAGTTCAAA +
Preference number: 5 (lower is better)
Translates to: IPTGAHRSLKLGTIM*PKKFLAFYRKQQFK
Trigger: TTTGAACTGCTGCTTCCTGTAAAATGCCAAAAACTTCTTTGGGCACATGATGGTTCCCAGCTTGAGAGATCTGTGAGCTCCAGTTGGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000460436.6
ENST00000675015.1
CDS CCA 90 bp AGTTGCCATGAAACATTCCAACTGGAGCTCACAGATCTCTCAAGCTaGGAACCATCATGTGCCCAAAGAAGTTTTTGGCATTTTACAGGA +
Preference number: 5 (lower is better)
Translates to: SCHETFQLELTDLSS*EPSCAQRSFWHFTG
Trigger: TCCTGTAAAATGCCAAAAACTTCTTTGGGCACATGATGGTTCCCAGCTTGAGAGATCTGTGAGCTCCAGTTGGAATGTTTCATGGCAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000460436.6
ENST00000675015.1
CDS-3UTR CAA 90 bp ACCAACTGTGGGCAAACTACTGTCCACAAGACCAATAGCTTCATAGCCAACATCAAAACCACAGTTCTTTaGAAAGAGGAGGTCGCATGT +
Preference number: 5 (lower is better)
Translates to: TNCGQTTVHKTNSFIANIKTTVL*KEEVAC
Trigger: ACATGCGACCTCCTCTTTCAAAAGAACTGTGGTTTT...GATGTTGGCTATGAAGCTATTGGTCTTGTGGACAGTAGTTTGCCCACAGTTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
ENST00000675037.1
CDS-3UTR CAA 90 bp ACCAACTGTGGGCAAACTACTGTCCACAAGACCAATAGCTTCATAGCCAACATCTTGGAGTACCTCCTGTaGCAATCAAGCACTTTTCAT +
Preference number: 5 (lower is better)
Translates to: TNCGQTTVHKTNSFIANILEYLL*QSSTFH
Trigger: ATGAAAAGTGCTTGATTGCAACAGGAGGTACTCCAA...GATGTTGGCTATGAAGCTATTGGTCTTGTGGACAGTAGTTTGCCCACAGTTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674957.1
ENST00000674997.1
ENST00000675037.1
CDS-3UTR CAA 90 bp AACACCAACTGTGGGCAAACTACTGTCCACAAGACCAATAGCTTCATAGCCAACTTGGAGTACCTCCTGTaGCAATCAAGCACTTTTCAT +
Preference number: 5 (lower is better)
Translates to: NTNCGQTTVHKTNSFIANLEYLL*QSSTFH
Trigger: ATGAAAAGTGCTTGATTGCAACAGGAGGTACTCCAA...GTTGGCTATGAAGCTATTGGTCTTGTGGACAGTAGTTTGCCCACAGTTGGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674957.1
ENST00000674997.1
ENST00000675037.1
CDS-3UTR CAA 90 bp ACAGCTTTTTGGTCACCAAGGGATCCCTCACCAGAACTAATCTCAGTGTTTAGCTTGGAGTACCTCCTGTaGCAATCAAGCACTTTTCAT +
Preference number: 5 (lower is better)
Translates to: TAFWSPRDPSPELISVFSLEYLL*QSSTFH
Trigger: ATGAAAAGTGCTTGATTGCAACAGGAGGTACTCCAA...GCTAAACACTGAGATTAGTTCTGGTGAGGGATCCCTTGGTGACCAAAAAGCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675774.1
CDS-3UTR CAA 90 bp CCGTCTCCAGGTTTAACTGTGAAGCACCAGGTCTCTGAACTCAGATTTGTAGTATTGGAGTACCTCCTGTaGCAATCAAGCACTTTTCAT +
Preference number: 5 (lower is better)
Translates to: PSPGLTVKHQVSELRFVVLEYLL*QSSTFH
Trigger: ATGAAAAGTGCTTGATTGCAACAGGAGGTACTCCAA...TACTACAAATCTGAGTTCAGAGACCTGGTGCTTCACAGTTAAACCTGGAGACGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
CDS-3UTR CAA 90 bp AACACCAACTGTGGGCAAACTACTGTCCACAAGACCAATAGCTTCATAGCCAACAGTTTGGCTACTTCATaGAGATCTTCATGCTGCTCA +
Preference number: 5 (lower is better)
Translates to: NTNCGQTTVHKTNSFIANSLATS*RSSCCS
Trigger: TGAGCAGCATGAAGATCTCAATGAAGTAGCCAAACT...GTTGGCTATGAAGCTATTGGTCTTGTGGACAGTAGTTTGCCCACAGTTGGTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000416073.7
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674722.1
ENST00000674957.1
ENST00000674997.1
ENST00000675037.1
CDS-3UTR CAA 90 bp CCGTCTCCAGGTTTAACTGTGAAGCACCAGGTCTCTGAACTCAGATTTGTAGTAAGTTTGGCTACTTCATaGAGATCTTCATGCTGCTCA +
Preference number: 5 (lower is better)
Translates to: PSPGLTVKHQVSELRFVVSLATS*RSSCCS
Trigger: TGAGCAGCATGAAGATCTCAATGAAGTAGCCAAACT...TACTACAAATCTGAGTTCAGAGACCTGGTGCTTCACAGTTAAACCTGGAGACGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
CDS-3UTR CAA 90 bp TACAACAGGTATCAGAACTGCTGGCCCCAGATTAAGCTTCAGATGGTGAACTCTGCTTACATAAGTGCTTaGCAACCTCTGAATAGGAAG +
Preference number: 5 (lower is better)
Translates to: YNRYQNCWPQIKLQMVNSAYISA*QPLNRK
Trigger: CTTCCTATTCAGAGGTTGCAAAGCACTTATGTAAGC...AGAGTTCACCATCTGAAGCTTAATCTGGGGCCAGCAGTTCTGATACCTGTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527892.5
ENST00000535724.6
CDS-3UTR CAA 90 bp CATAGTCTTGTAGGCATAATAAACTCCTGCCCCAGTGACTGTTGCTCCTACAATAAGAAGTACACTAGGTaGCTGCCATCTTTCCCAGAA +
Preference number: 5 (lower is better)
Translates to: HSLVGIINSCPSDCCSYNKKYTR*LPSFPE
Trigger: TTCTGGGAAAGATGGCAGCAACCTAGTGTACTTCTT...ATTGTAGGAGCAACAGTCACTGGGGCAGGAGTTTATTATGCCTACAAGACTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529877.1
CDS-3UTR CAA 90 bp GGCCTGTTCTCCCAGTGTTCAGAAGGGATTTGGTTGAAGCTGAAACTGCCCTTATTGACTTGTGAAACTTaGAATCGTATTCCCAGGAAA +
Preference number: 5 (lower is better)
Translates to: GLFSQCSEGIWLKLKLPLLTCET*NRIPRK
Trigger: TTTCCTGGGAATACGATTCAAAGTTTCACAAGTCAA...TAAGGGCAGTTTCAGCTTCAACCAAATCCCTTCTGAACACTGGGAGAACAGGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676229.1
CDS GCA 90 bp ATTATGAGCTTGGGAAATTCTAGAAGCCAACAGTCTTTCGAGGCCTaGTTCAAGCTACTTCTAGAGGATTTATTTCTCTATGCCCCCTCA +
Preference number: 5 (lower is better)
Translates to: IMSLGNSRSQQSFEA*FKLLLEDLFLYAPS
Trigger: TGAGGGGGCATAGAGAAATAAATCCTCTAGAAGTAGCTTGAAGCAGGCCTCGAAAGACTGTTGGCTTCTAGAATTTCCCAAGCTCATAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674582.1
CDS CCA 90 bp ACAGATCTCTCAAGCTGGGAACCATCATGTGCCCAAAGAAGTTTTTaGCATTTTACAGGAAGCAGCAGTTCAAAGACACCCATAATTCTG +
Preference number: 5 (lower is better)
Translates to: TDLSSWEPSCAQRSF*HFTGSSSSKTPIIL
Trigger: CAGAATTATGGGTGTCTTTGAACTGCTGCTTCCTGTAAAATGCCAAAAACTTCTTTGGGCACATGATGGTTCCCAGCTTGAGAGATCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000460436.6
ENST00000675015.1
CDS-3UTR CAA 90 bp ATGTGGTCAGTTTCTACCTTCCTGCCGTCTTTCAGCTTGATAAGTAACTTGCCATTGGAGTACCTCCTGTaGCAATCAAGCACTTTTCAT +
Preference number: 5 (lower is better)
Translates to: MWSVSTFLPSFSLISNLPLEYLL*QSSTFH
Trigger: ATGAAAAGTGCTTGATTGCAACAGGAGGTACTCCAA...TGGCAAGTTACTTATCAAGCTGAAAGACGGCAGGAAGGTAGAAACTGACCACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527892.5
ENST00000535724.6
ENST00000674555.1
ENST00000674997.1
CDS-3UTR CAA 90 bp GGACAGGAGTTGTTCCAGGTAAACAAAGTCTATTCCATACATTTATTTGTTCACTTTTCCATGGTCCAGTaGCTGAGGTATTCGGGGAGG +
Preference number: 5 (lower is better)
Translates to: GQELFQVNKVYSIHLFVHFSMVQ*LRYSGR
Trigger: CCTCCCCGAATACCTCAGCAACTGGACCATGGAAAA...GTGAACAAATAAATGTATGGAATAGACTTTGTTTACCTGGAACAACTCCTGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
CDS-3UTR CAA 90 bp GGACAGGAGTTGTTCCAGGTAAACAAAGTCTATTCCATACATTTATTTGTTCACGATTGCACAATAGCATaGGGCATCACCTTAACCCCC +
Preference number: 5 (lower is better)
Translates to: GQELFQVNKVYSIHLFVHDCTIA*GITLTP
Trigger: GGGGGTTAAGGTGATGCCCAATGCTATTGTGCAATC...GTGAACAAATAAATGTATGGAATAGACTTTGTTTACCTGGAACAACTCCTGTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674957.1
ENST00000676229.1
CDS-3UTR CAA 90 bp CCCATCTCTGTAAGCAGCAATTACTGCTGTATAATAATTTCGATGTCACAGGATGTGGCAGATTTGGGGTaGTCTTGTGCAGTTGCTTTT +
Preference number: 5 (lower is better)
Translates to: PISVSSNYCCIIISMSQDVADLG*SCAVAF
Trigger: AAAAGCAACTGCACAAGACAACCCCAAATCTGCCAC...ATCCTGTGACATCGAAATTATTATACAGCAGTAATTGCTGCTTACAGAGATGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676229.1
CDS-3UTR CAA 90 bp TGTGTTCACATGATTATGGAGCGGTCTTGTTTTTGTCTCAATCCACCATGGTCAAGTTTGGCTACTTCATaGAGATCTTCATGCTGCTCA +
Preference number: 5 (lower is better)
Translates to: CVHMIMERSCFCLNPPWSSLATS*RSSCCS
Trigger: TGAGCAGCATGAAGATCTCAATGAAGTAGCCAAACT...TGACCATGGTGGATTGAGACAAAAACAAGACCGCTCCATAATCATGTGAACACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675050.1
CDS-3UTR CAA 90 bp ATTATGGAGCGGTCTTGTTTTTGTCTCAATCCACCATGGTCACAGAGTAGCCTTAACAAGTTAGGTTTATaGCTCACTGCAGCAAGAAAG +
Preference number: 5 (lower is better)
Translates to: IMERSCFCLNPPWSQSSLNKLGL*LTAARK
Trigger: CTTTCTTGCTGCAGTGAGCAATAAACCTAACTTGTT...AAGGCTACTCTGTGACCATGGTGGATTGAGACAAAAACAAGACCGCTCCATAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675050.1
CDS-3UTR CAA 90 bp TCTTCATGTTTTTGTCTGTGTTCACATGATTATGGAGCGGTCTTGTTTTTGTCTGTGGCAGATTTGGGGTaGTCTTGTGCAGTTGCTTTT +
Preference number: 5 (lower is better)
Translates to: SSCFCLCSHDYGAVLFLSVADLG*SCAVAF
Trigger: AAAAGCAACTGCACAAGACAACCCCAAATCTGCCAC...AGACAAAAACAAGACCGCTCCATAATCATGTGAACACAGACAAAAACATGAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000675050.1
CDS TCA 90 bp CAAACCACATTATCAGACAGCTCTCGCCTATTTCTTACTCTGATTTaGCTCACAATAGGCAAGAACTATCTACTTTTCTTGTCCGTTTGG +
Preference number: 5 (lower is better)
Translates to: QTTLSDSSRLFLTLI*LTIGKNYLLFLSVW
Trigger: CCAAACGGACAAGAAAAGTAGATAGTTCTTGCCTATTGTGAGTCAAATCAGAGTAAGAAATAGGCGAGAGCTGTCTGATAATGTGGTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676048.1
CDS-3UTR CAA 90 bp TGTGTTCACATGATTATGGAGCGGTCTTGTTTTTGTCTCAATCCACCATGGTCAGATTCTGTGATTGGATaGGGTATCTTATCAACTCAA +
Preference number: 5 (lower is better)
Translates to: CVHMIMERSCFCLNPPWSDSVIG*GILSTQ
Trigger: TTGAGTTGATAAGATACCCAATCCAATCACAGAATC...TGACCATGGTGGATTGAGACAAAAACAAGACCGCTCCATAATCATGTGAACACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675050.1
CDS TCA 72 bp CTTTCCTCTCACGCACGACCGACGGGTCAAACACCGTaGGCCCCGGCCAGCTCCCCCAGTCTCTTCACACGC +
Preference number: 6 (lower is better)
Translates to: LSSHARPTGQTP*APASSPSLFTR
Trigger: GCGTGTGAAGAGACTGGGGGAGCTGGCCGGGGCTCACGGTGTTTGACCCGTCGGTCGTGCGTGAGAGGAAAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000287295.8
ENST00000319908.8
ENST00000674546.1
ENST00000675240.1
ENST00000676229.1
CDS CCA 72 bp ACGCACATTACGCAGACTCCTCCTCCCAGCTCCGGGTaGGCATTGGACAGAGAAGCCGGCCTGCTAGAGCCG +
Preference number: 6 (lower is better)
Translates to: THITQTPPPSSG*ALDREAGLLEP
Trigger: CGGCTCTAGCAGGCCGGCTTCTCTGTCCAATGCCCACCCGGAGCTGGGAGGAGGAGTCTGCGTAATGTGCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287295.8
ENST00000319908.8
ENST00000674546.1
ENST00000676229.1
CDS CAA 72 bp ATTACGCAGACTCCTCCTCCCAGCTCCGGGTGGGCATaGGACAGAGAAGCCGGCCTGCTAGAGCCGGGGAAG +
Preference number: 6 (lower is better)
Translates to: ITQTPPPSSGWA*DREAGLLEPGK
Trigger: CTTCCCCGGCTCTAGCAGGCCGGCTTCTCTGTCCAATGCCCACCCGGAGCTGGGAGGAGGAGTCTGCGTAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287295.8
ENST00000674546.1
ENST00000676229.1
CDS TCA 72 bp ATCCAGGCCGAGCGCCCACTTACAGGACAGTGGGCATaGGGGCCTCGGTGCTCAAGTTCATTTGTAACGCAA +
Preference number: 6 (lower is better)
Translates to: IQAERPLTGQWA*GPRCSSSFVTQ
Trigger: TTGCGTTACAAATGAACTTGAGCACCGAGGCCCTCATGCCCACTGTCCTGTAAGTGGGCGCTCGGCCTGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460436.6
ENST00000675015.1
CDS CCA 72 bp AATGAGGCAAGGGGAGTGGAGAACTGGAAGGCCTCTTaGCAGACTATCTTTTCCTTCCTTACCTTCCTGCCG +
Preference number: 6 (lower is better)
Translates to: NEARGVENWKAS*QTIFSFLTFLP
Trigger: CGGCAGGAAGGTAAGGAAGGAAAAGATAGTCTGCCAAGAGGCCTTCCAGTTCTCCACTCCCCTTGCCTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675015.1
CDS CAA 90 bp GAGAGGCTTTCACTGACAAGCCCCTCTGGCCAATACAGAAACCCCTaGTTCAGGAGAATCTGGACCACTGCTTCTCAACACTCTCCAAGA +
Preference number: 6 (lower is better)
Translates to: ERLSLTSPSGQYRNP*FRRIWTTASQHSPR
Trigger: TCTTGGAGAGTGTTGAGAAGCAGTGGTCCAGATTCTCCTGAACAAGGGGTTTCTGTATTGGCCAGAGGGGCTTGTCAGTGAAAGCCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674582.1
CDS GCA 72 bp CCCATGCACATCCCCCATGTCATTCGAACAGAAATCTaGCACCCTAGCCAGGACTCAAAACTCTGTGAGACA +
Preference number: 6 (lower is better)
Translates to: PMHIPHVIRTEI*HPSQDSKLCET
Trigger: TGTCTCACAGAGTTTTGAGTCCTGGCTAGGGTGGCAGATTTCTGTTCGAATGACATGGGGGATGTGCATGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675015.1
CDS CCA 72 bp AGCTCAAAAGCCACATGTGGCTGGTGGCTAACGTACTaGACAGAGCAGAGATGGAACATTTCCATCGCAGCA +
Preference number: 6 (lower is better)
Translates to: SSKATCGWWLTY*TEQRWNISIAA
Trigger: TGCTGCGATGGAAATGTTCCATCTCTGCTCTGTCCAGTACGTTAGCCACCAGCCACATGTGGCTTTTGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674582.1
CDS CAA 72 bp TCACTGACAAGCCCCTCTGGCCAATACAGAAACCCCTaGTTCAGGAGAATCTGGACCACTGCTTCTCAACAC +
Preference number: 6 (lower is better)
Translates to: SLTSPSGQYRNP*FRRIWTTASQH
Trigger: GTGTTGAGAAGCAGTGGTCCAGATTCTCCTGAACAAGGGGTTTCTGTATTGGCCAGAGGGGCTTGTCAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674582.1
CDS TCA 72 bp AGGTCTTCCCAGAGACACACAAAACAGCAGTGTCATTaGGCTAGCCACTGTCCACTGTCTAGGACAGATACC +
Preference number: 6 (lower is better)
Translates to: RSSQRHTKQQCH*ASHCPLSRTDT
Trigger: GGTATCTGTCCTAGACAGTGGACAGTGGCTAGCTCAATGACACTGCTGTTTTGTGTGTCTCTGGGAAGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674582.1
CDS CCA 72 bp ACTCTGTCTCACTCTCTGATCGGATACCAGTTCCTGTaGCCAGCCCCCAAAACAAATAAACTGACTGCTCTG +
Preference number: 6 (lower is better)
Translates to: TLSHSLIGYQFL*PAPKTNKLTAL
Trigger: CAGAGCAGTCAGTTTATTTGTTTTGGGGGCTGGCCACAGGAACTGGTATCCGATCAGAGAGTGAGACAGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675092.1
CDS GCA 72 bp ATACAGAAACCCCTTGTTCAGGAGAATCTGGACCACTaGTTCTCAACACTCTCCAAGAGGAGTGCTAGGACT +
Preference number: 6 (lower is better)
Translates to: IQKPLVQENLDH*FSTLSKRSART
Trigger: AGTCCTAGCACTCCTCTTGGAGAGTGTTGAGAAGCAGTGGTCCAGATTCTCCTGAACAAGGGGTTTCTGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674582.1
CDS CCA 72 bp TGTGGCTGGTGGCTAACGTACTGGACAGAGCAGAGATaGAACATTTCCATCGCAGCAGAAAGTTCTATTGGA +
Preference number: 6 (lower is better)
Translates to: CGWWLTYWTEQR*NISIAAESSIG
Trigger: TCCAATAGAACTTTCTGCTGCGATGGAAATGTTCCATCTCTGCTCTGTCCAGTACGTTAGCCACCAGCCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674582.1
CDS CCA 72 bp CCATGTTTCATGAGCTCAAAAGCCACATGTGGCTGGTaGCTAACGTACTGGACAGAGCAGAGATGGAACATT +
Preference number: 6 (lower is better)
Translates to: PCFMSSKATCGW*LTYWTEQRWNI
Trigger: AATGTTCCATCTCTGCTCTGTCCAGTACGTTAGCCACCAGCCACATGTGGCTTTTGAGCTCATGAAACATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674582.1
CDS GCA 72 bp GGAGCTCACAGATCTCTCAAGCTGGGAACCATCATGTaGCCAAAGAAGTTTTTGGCATTTTACAGGAAGCAG +
Preference number: 6 (lower is better)
Translates to: GAHRSLKLGTIM*PKKFLAFYRKQ
Trigger: CTGCTTCCTGTAAAATGCCAAAAACTTCTTTGGGCACATGATGGTTCCCAGCTTGAGAGATCTGTGAGCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000460436.6
ENST00000675015.1
CDS GCA 72 bp AGACATGTGTGGGAGAGAAGTCCATTCCAAGAGAGGTaGCTCCCATCTAAAGAAAACCTGGCACTAAGATCT +
Preference number: 6 (lower is better)
Translates to: RHVWERSPFQER*LPSKENLALRS
Trigger: AGATCTTAGTGCCAGGTTTTCTTTAGATGGGAGGCACCTCTCTTGGAATGGACTTCTCTCCCACACATGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674582.1
CDS CCA 72 bp ACTCTGTCTCACTCTCTGATCGGATACCAGTTCCTGTaGCCAGCCCCCAAAACAAATAAACATGGAAGCAAA +
Preference number: 6 (lower is better)
Translates to: TLSHSLIGYQFL*PAPKTNKHGSK
Trigger: TTTGCTTCCATGTTTATTTGTTTTGGGGGCTGGCCACAGGAACTGGTATCCGATCAGAGAGTGAGACAGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674582.1
CDS GCA 72 bp AACACCGCACTCTTATGCCAACCAAAGAACTTAGTATaGAGATCACGAGAGATGCCAACTGATCTGCTGTTG +
Preference number: 6 (lower is better)
Translates to: NTALLCQPKNLV*RSREMPTDLLL
Trigger: CAACAGCAGATCAGTTGGCATCTCTCGTGATCTGCATACTAAGTTCTTTGGTTGGCATAAGAGTGCGGTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674591.1
CDS CCA 72 bp TCAAGCTGGGAACCATCATGTGCCCAAAGAAGTTTTTaGCATTTTACAGGAAGCAGCAGTTCAAAGACACCC +
Preference number: 6 (lower is better)
Translates to: SSWEPSCAQRSF*HFTGSSSSKTP
Trigger: GGGTGTCTTTGAACTGCTGCTTCCTGTAAAATGCCAAAAACTTCTTTGGGCACATGATGGTTCCCAGCTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000460436.6
ENST00000675015.1
CDS CCA 72 bp GAAACATTCCAACTGGAGCTCACAGATCTCTCAAGCTaGGAACCATCATGTGCCCAAAGAAGTTTTTGGCAT +
Preference number: 6 (lower is better)
Translates to: ETFQLELTDLSS*EPSCAQRSFWH
Trigger: ATGCCAAAAACTTCTTTGGGCACATGATGGTTCCCAGCTTGAGAGATCTGTGAGCTCCAGTTGGAATGTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000460436.6
ENST00000675015.1
CDS CCA 72 bp CCATCTAAAGAAAACCTGGCACTAAGATCTGCCAAATaGAATGGGAGGCAGCTAAATAACTACTCAGCCCAG +
Preference number: 6 (lower is better)
Translates to: PSKENLALRSAK*NGRQLNNYSAQ
Trigger: CTGGGCTGAGTAGTTATTTAGCTGCCTCCCATTCCATTTGGCAGATCTTAGTGCCAGGTTTTCTTTAGATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674582.1
CDS TCA 72 bp AAAGAACTTAGTATGCAGATCACGAGAGATGCCAACTaGTCTGCTGTTGCTAGAGCATCTAGGGATGACCAT +
Preference number: 6 (lower is better)
Translates to: KELSMQITRDAN*SAVARASRDDH
Trigger: ATGGTCATCCCTAGATGCTCTAGCAACAGCAGATCAGTTGGCATCTCTCGTGATCTGCATACTAAGTTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674591.1
CDS CAA 72 bp CACAATAGGCAAGAACTATCTACTTTTCTTGTCCGTTaGGGAGTCACATCAGGGGATGAGGATATAGGTAGC +
Preference number: 6 (lower is better)
Translates to: HNRQELSTFLVR*GVTSGDEDIGS
Trigger: GCTACCTATATCCTCATCCCCTGATGTGACTCCCAAACGGACAAGAAAAGTAGATAGTTCTTGCCTATTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676048.1
CDS CAA 72 bp TGTCTTGCTTTCTCCTTCTTAAACAGCACCTTGCCCTaGAGACACCTCTGGCAAAAGGATGCAGAAGTTAAA +
Preference number: 6 (lower is better)
Translates to: CLAFSFLNSTLP*RHLWQKDAEVK
Trigger: TTTAACTTCTGCATCCTTTTGCCAGAGGTGTCTCAAGGGCAAGGTGCTGTTTAAGAAGGAGAAAGCAAGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674582.1
CDS TCA 72 bp CACTGTCCACTGTCTAGGACAGATACCCACAATATTTaGATCTATGCTTTGACCAGGATACCTGATTTTGCC +
Preference number: 6 (lower is better)
Translates to: HCPLSRTDTHNI*IYALTRIPDFA
Trigger: GGCAAAATCAGGTATCCTGGTCAAAGCATAGATTCAAATATTGTGGGTATCTGTCCTAGACAGTGGACAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674582.1
CDS CAA 72 bp TGTGTTATGGTCCTAGAGATACTGAGTTGTAATCAGTaGGGTCTCCAAGGCACACCACTATTACCAGAACAT +
Preference number: 6 (lower is better)
Translates to: CVMVLEILSCNQ*GLQGTPLLPEH
Trigger: ATGTTCTGGTAATAGTGGTGTGCCTTGGAGACCCAACTGATTACAACTCAGTATCTCTAGGACCATAACACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533719.2
CDS GCA 72 bp AAATATTTTCAGCTTTCTGGGCCATTTGGTGTCTGCTaGAACTACTCAATTCCACTGATGCTGCATAAAAGC +
Preference number: 6 (lower is better)
Translates to: KYFQLSGPFGVC*NYSIPLMLHKS
Trigger: GCTTTTATGCAGCATCAGTGGAATTGAGTAGTTGCAGCAGACACCAAATGGCCCAGAAAGCTGAAAATATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676048.1
CDS GCA 72 bp GGTAAATATTTTCAGCTTTCTGGGCCATTTGGTGTCTaGTGCAACTACTCAATTCCACTGATGCTGCATAAA +
Preference number: 6 (lower is better)
Translates to: GKYFQLSGPFGV*CNYSIPLMLHK
Trigger: TTTATGCAGCATCAGTGGAATTGAGTAGTTGCAGCAGACACCAAATGGCCCAGAAAGCTGAAAATATTTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676048.1
CDS CCA 72 bp AGCAGAATACTATCGAGTCTATTAATGGGAGCTGTTTaGCAGCTTCTTTATACACGCTGCTTTTCTACTTAC +
Preference number: 6 (lower is better)
Translates to: SRILSSLLMGAV*QLLYTRCFSTY
Trigger: GTAAGTAGAAAAGCAGCGTGTATAAAGAAGCTGCCAAACAGCTCCCATTAATAGACTCGATAGTATTCTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676048.1
CDS CAA 90 bp TCAAACCACATTATCAGACAGCTCTCGCCTATTTCTTACTCTGATTaGACTCACAATAGGCAAGAACTATCTACTTTTCTTGTCCGTTTG +
Preference number: 6 (lower is better)
Translates to: SNHIIRQLSPISYSD*THNRQELSTFLVRL
Trigger: CAAACGGACAAGAAAAGTAGATAGTTCTTGCCTATTGTGAGTCAAATCAGAGTAAGAAATAGGCGAGAGCTGTCTGATAATGTGGTTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676048.1
CDS CCA 72 bp CTTGAATTTATTCGTGCTTTTATCCCATGCCACATTTaGAAAGTGATGAGGTTCCCACTTTTGCTATTCACT +
Preference number: 6 (lower is better)
Translates to: LEFIRAFIPCHI*KVMRFPLLLFT
Trigger: AGTGAATAGCAAAAGTGGGAACCTCATCACTTTCCAAATGTGGCATGGGATAAAAGCACGAATAAATTCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674591.1
CDS CAA 72 bp AAGCAGAATACTATCGAGTCTATTAATGGGAGCTGTTaGGCAGCTTCTTTATACACGCTGCTTTTCTACTTA +
Preference number: 6 (lower is better)
Translates to: KQNTIESINGSC*AASLYTLLFYL
Trigger: TAAGTAGAAAAGCAGCGTGTATAAAGAAGCTGCCAAACAGCTCCCATTAATAGACTCGATAGTATTCTGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676048.1
CDS CAA 90 bp AAAGTTTTAAAGCAGAATACTATCGAGTCTATTAATGGGAGCTGTTaGGCAGCTTCTTTATACACGCTGCTTTTCTACTTACATAGGCAC +
Preference number: 6 (lower is better)
Translates to: KVLKQNTIESINGSC*AASLYTLLFYLHRH
Trigger: GTGCCTATGTAAGTAGAAAAGCAGCGTGTATAAAGAAGCTGCCAAACAGCTCCCATTAATAGACTCGATAGTATTCTGCTTTAAAACTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676048.1
CDS TCA 72 bp TTATCAGACAGCTCTCGCCTATTTCTTACTCTGATTTaGCTCACAATAGGCAAGAACTATCTACTTTTCTTG +
Preference number: 6 (lower is better)
Translates to: LSDSSRLFLTLI*LTIGKNYLLFL
Trigger: CAAGAAAAGTAGATAGTTCTTGCCTATTGTGAGTCAAATCAGAGTAAGAAATAGGCGAGAGCTGTCTGATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676048.1
CDS CAA 72 bp ATTATCAGACAGCTCTCGCCTATTTCTTACTCTGATTaGACTCACAATAGGCAAGAACTATCTACTTTTCTT +
Preference number: 6 (lower is better)
Translates to: IIRQLSPISYSD*THNRQELSTFL
Trigger: AAGAAAAGTAGATAGTTCTTGCCTATTGTGAGTCAAATCAGAGTAAGAAATAGGCGAGAGCTGTCTGATAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676048.1