RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AIF1L (Homo sapiens)

Ensembl gene IDs: ENSG00000126878

Ensembl transcript IDs: ENST00000247291.8, ENST00000372298.1, ENST00000372300.5, ENST00000372301.2, ENST00000372302.5, ENST00000372309.7, ENST00000372314.3, ENST00000472942.5, ENST00000478257.1

Found 753 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCGAAGCCCTCTGCTGCCCCAGTAAGGGACAGTAGGGCTGCACGCTaGCTCTCAGCTGCCTGCACAGGTGTGGCCAGAGAGCAGGACTGG +
Preference number: 1 (lower is better)
Translates to: PKPSAAPVRDSRAAR*LSAACTGVAREQDW
Trigger: CCAGTCCTGCTCTCTGGCCACACCTGTGCAGGCAGCTGAGAGGCAGCGTGCAGCCCTACTGTCCCTTACTGGGGCAGCAGAGGGCTTCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR CCA 90 bp GCAGCGGGGCCCCGAGTGGCTGTGTCCTGGGTGACACCAGAGCACTaGAGCCATGGCACTGTCCAAGGAAACCCGAAAGAGGCCCTGCAG +
Preference number: 1 (lower is better)
Translates to: AAGPRVAVSWVTPEH*SHGTVQGNPKEALQ
Trigger: CTGCAGGGCCTCTTTCGGGTTTCCTTGGACAGTGCCATGGCTCCAGTGCTCTGGTGTCACCCAGGACACAGCCACTCGGGGCCCCGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR TCA 90 bp GGCAGCTTCAGAGGCCTGGTCTTTGCCCTAAGCCTGATGCTGACTTaGAGGCATGGGAGAGGGCGAATCCTGGACCAGGGTCTTCAGAGC +
Preference number: 1 (lower is better)
Translates to: GSFRGLVFALSLMLT*RHGRGRILDQGLQS
Trigger: GCTCTGAAGACCCTGGTCCAGGATTCGCCCTCTCCCATGCCTTCAAGTCAGCATCAGGCTTAGGGCAAAGACCAGGCCTCTGAAGCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR GCA 90 bp ACCAAGACCTCCCAGTCCTGTCCACTTAAGGTGTTGCAAAGGCTCTaGCAAGACTCTCACCCAGTCTTGGGCCCATCTAGGCCCCCAGGA +
Preference number: 1 (lower is better)
Translates to: TKTSQSCPLKVLQRL*QDSHPVLGPSRPPG
Trigger: TCCTGGGGGCCTAGATGGGCCCAAGACTGGGTGAGAGTCTTGGCAGAGCCTTTGCAACACCTTAAGTGGACAGGACTGGGAGGTCTTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR CCA 90 bp TGCCTGCACAGGTGTGGCCAGAGAGCAGGACTGGAGGGTTCCTTCTaGTACCTTCTTGAAGGGCTCCCAATGCCAAGCTCCTTTCCTTCC +
Preference number: 1 (lower is better)
Translates to: CLHRCGQRAGLEGSF*YLLEGLPMPSSFPS
Trigger: GGAAGGAAAGGAGCTTGGCATTGGGAGCCCTTCAAGAAGGTACCAGAAGGAACCCTCCAGTCCTGCTCTCTGGCCACACCTGTGCAGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR CCA 90 bp CACTTAAGGTGTTGCAAAGGCTCTGCCAAGACTCTCACCCAGTCTTaGGCCCATCTAGGCCCCCAGGACTGCAGGGAAGTCACCCCATAC +
Preference number: 1 (lower is better)
Translates to: HLRCCKGSAKTLTQS*AHLGPQDCREVTPY
Trigger: GTATGGGGTGACTTCCCTGCAGTCCTGGGGGCCTAGATGGGCCCAAGACTGGGTGAGAGTCTTGGCAGAGCCTTTGCAACACCTTAAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR GCA 90 bp TGGCTCCAACCACCAAGACCTCCCAGTCCTGTCCACTTAAGGTGTTaGAAAGGCTCTGCCAAGACTCTCACCCAGTCTTGGGCCCATCTA +
Preference number: 1 (lower is better)
Translates to: WLQPPRPPSPVHLRC*KGSAKTLTQSWAHL
Trigger: TAGATGGGCCCAAGACTGGGTGAGAGTCTTGGCAGAGCCTTTGCAACACCTTAAGTGGACAGGACTGGGAGGTCTTGGTGGTTGGAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR CCA 90 bp CAGAGGCCTGGTCTTTGCCCTAAGCCTGATGCTGACTTGAAGGCATaGGAGAGGGCGAATCCTGGACCAGGGTCTTCAGAGCAAGTGAAA +
Preference number: 1 (lower is better)
Translates to: QRPGLCPKPDADLKA*ERANPGPGSSEQVK
Trigger: TTTCACTTGCTCTGAAGACCCTGGTCCAGGATTCGCCCTCTCCCATGCCTTCAAGTCAGCATCAGGCTTAGGGCAAAGACCAGGCCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR TCA 90 bp CGTCAGAGCCAGGTCAGTGAGCCTGAACTTGGCTTGGAGACTTTCTaGAAGGATGGAGAGTGCTGGTTCCTCCAAGTGAGGGGAACACAG +
Preference number: 1 (lower is better)
Translates to: RQSQVSEPELGLETF*KDGECWFLQVRGTQ
Trigger: CTGTGTTCCCCTCACTTGGAGGAACCAGCACTCTCCATCCTTTCAGAAAGTCTCCAAGCCAAGTTCAGGCTCACTGACCTGGCTCTGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR TCA 90 bp TCCTCATGCCTTACCTGTTTTCCTCCCTCAATCTGCTATCAGAGGTaGCTAAGGAGCCGCAGGGAACCCACGTTGGCTCCAACCACCAAG +
Preference number: 1 (lower is better)
Translates to: SSCLTCFPPSICYQR*LRSRREPTLAPTTK
Trigger: CTTGGTGGTTGGAGCCAACGTGGGTTCCCTGCGGCTCCTTAGTCACCTCTGATAGCAGATTGAGGGAGGAAAACAGGTAAGGCATGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR TCA 90 bp CCCTCCTTCCAGGGACAACTCTTGAGACCCTCTCCTCCCAGGAGTTaGGTCTCAAGAAATGAAGGGACTGATGGGGTTTCCCAGGACACA +
Preference number: 1 (lower is better)
Translates to: PSFQGQLLRPSPPRS*VSRNEGTDGVSQDT
Trigger: TGTGTCCTGGGAAACCCCATCAGTCCCTTCATTTCTTGAGACTCAACTCCTGGGAGGAGAGGGTCTCAAGAGTTGTCCCTGGAAGGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR TCA 90 bp CCCTTAGCCAGAGAAGTAAGAGTCCTAGAACCAAGAGCCACAACCTaGAATAGATGCAGACTGCCCCCGCCCTCCTTCCAGGGACAACTC +
Preference number: 1 (lower is better)
Translates to: PLAREVRVLEPRATT*NRCRLPPPSFQGQL
Trigger: GAGTTGTCCCTGGAAGGAGGGCGGGGGCAGTCTGCATCTATTTCAGGTTGTGGCTCTTGGTTCTAGGACTCTTACTTCTCTGGCTAAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR GCA 90 bp GTCTGGCCCAGCTACCCTCCAGGGTGCATTAGGGTTCTAAAATCCTaGGAGTCCATAAGAAAGGACACAGGTGACCCCAGTTCAATTCCC +
Preference number: 1 (lower is better)
Translates to: VWPSYPPGCIRVLKS*ESIRKDTGDPSSIP
Trigger: GGGAATTGAACTGGGGTCACCTGTGTCCTTTCTTATGGACTCGCAGGATTTTAGAACCCTAATGCACCCTGGAGGGTAGCTGGGCCAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000247291.8
ENST00000372298.1
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR GCA 90 bp TCTTCCTGCATGAATTACAAGAGGCAGCTTCAGAGGCCTGGTCTTTaGCCTAAGCCTGATGCTGACTTGAAGGCATGGGAGAGGGCGAAT +
Preference number: 1 (lower is better)
Translates to: SSCMNYKRQLQRPGL*PKPDADLKAWERAN
Trigger: ATTCGCCCTCTCCCATGCCTTCAAGTCAGCATCAGGCTTAGGGCAAAGACCAGGCCTCTGAAGCTGCCTCTTGTAATTCATGCAGGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR TCA 90 bp ACACACATACTTCATCCACCTGAATTTGCCCGACAAACCCTCCTCTaGGTCATAGGGACAAAGCCATACTTGGCAGTCCTCACGTTACTG +
Preference number: 1 (lower is better)
Translates to: THILHPPEFARQTLL*VIGTKPYLAVLTLL
Trigger: CAGTAACGTGAGGACTGCCAAGTATGGCTTTGTCCCTATGACTCAGAGGAGGGTTTGTCGGGCAAATTCAGGTGGATGAAGTATGTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR TCA 90 bp GAACTTACTGAAATAAGCCTGACTGGTTCTGCCTTCCTCTCTGAGTaGGGAACAGGGACACTGAATATGATGGGTAGTGAAGGAAGGCTT +
Preference number: 1 (lower is better)
Translates to: ELTEISLTGSAFLSE*GTGTLNMMGSEGRL
Trigger: AAGCCTTCCTTCACTACCCATCATATTCAGTGTCCCTGTTCCTCACTCAGAGAGGAAGGCAGAACCAGTCAGGCTTATTTCAGTAAGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR GCA 90 bp CTGAGAGATCTGGGGAGAGATGAGTTAGACCGTGTATACTGCACATaGCAGGACAACATGGGAGGATGTAAAGCTTATAATAGCAGGTCA +
Preference number: 1 (lower is better)
Translates to: LRDLGRDELDRVYCT*QDNMGGCKAYNSRS
Trigger: TGACCTGCTATTATAAGCTTTACATCCTCCCATGTTGTCCTGGCATGTGCAGTATACACGGTCTAACTCATCTCTCCCCAGATCTCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000247291.8
ENST00000372298.1
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR GCA 90 bp AAGGTTCTGAGAGATCTGGGGAGAGATGAGTTAGACCGTGTATACTaGACATGCCAGGACAACATGGGAGGATGTAAAGCTTATAATAGC +
Preference number: 1 (lower is better)
Translates to: KVLRDLGRDELDRVY*TCQDNMGGCKAYNS
Trigger: GCTATTATAAGCTTTACATCCTCCCATGTTGTCCTGGCATGTGCAGTATACACGGTCTAACTCATCTCTCCCCAGATCTCTCAGAACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000247291.8
ENST00000372298.1
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR CCA 90 bp GGTAGGAAGACAAATGAGAGAAGCAGAGTCAGGTTTCAAGCAGATTaGGGTCAGACAAGCAACCTTGTATTTCTCAGTCTTGGCTTACCA +
Preference number: 1 (lower is better)
Translates to: GRKTNERSRVRFQAD*GQTSNLVFLSLGLP
Trigger: TGGTAAGCCAAGACTGAGAAATACAAGGTTGCTTGTCTGACCCCAATCTGCTTGAAACCTGACTCTGCTTCTCTCATTTGTCTTCCTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000247291.8
ENST00000372298.1
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR CCA 90 bp TGTGTGCATTTGAAGCAGATCCTTGAGCTCAAGATCAGCCAGTCATaGCCAAATAACCTCATTCCTGAACTGGTTGAAACCAGTGGGTTA +
Preference number: 1 (lower is better)
Translates to: CVHLKQILELKISQS*PNNLIPELVETSGL
Trigger: TAACCCACTGGTTTCAACCAGTTCAGGAATGAGGTTATTTGGCCATGACTGGCTGATCTTGAGCTCAAGGATCTGCTTCAAATGCACACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR GCA 90 bp CTGGGCCCCAGTCCAGGGCACCTCCCTCTGGAGATAAGCCTGACCTTGGGCAAGGCCTCCGAAGCCCTCTaGTGCCCCAGTAAGGGACAG +
Preference number: 2 (lower is better)
Translates to: LGPSPGHLPLEISLTLGKASEAL*CPSKGQ
Trigger: CTGTCCCTTACTGGGGCAGCAGAGGGCTTCGGAGGC...CTTGCCCAAGGTCAGGCTTATCTCCAGAGGGAGGTGCCCTGGACTGGGGCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR CCA 90 bp AGAGGCCCTGCAGCCTTGTCCCTACTCCAAGGTCTTCTCAGAGTGGCCTGGGGTGAGGGGAACACAGGCTaGAAGCCTCCCTGCCCTGGC +
Preference number: 2 (lower is better)
Translates to: RGPAALSLLQGLLRVAWGEGNTG*KPPCPG
Trigger: GCCAGGGCAGGGAGGCTTCCAGCCTGTGTTCCCCTC...ACCCCAGGCCACTCTGAGAAGACCTTGGAGTAGGGACAAGGCTGCAGGGCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR CCA 90 bp CTGGGCCCCAGTCCAGGGCACCTCCCTCTGGAGATAAGCCTGACCTTGGGCAAGGCCAGAGAGCAGGACTaGAGGGTTCCTTCTGGTACC +
Preference number: 2 (lower is better)
Translates to: LGPSPGHLPLEISLTLGKAREQD*RVPSGT
Trigger: GGTACCAGAAGGAACCCTCCAGTCCTGCTCTCTGGC...CTTGCCCAAGGTCAGGCTTATCTCCAGAGGGAGGTGCCCTGGACTGGGGCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR GCA 90 bp CCAGGGCACCTCCCTCTGGAGATAAGCCTGACCTTGGGCAAGGCACTTAATCCCGCCTCCGAAGCCCTCTaGTGCCCCAGTAAGGGACAG +
Preference number: 2 (lower is better)
Translates to: PGHLPLEISLTLGKALNPASEAL*CPSKGQ
Trigger: CTGTCCCTTACTGGGGCAGCAGAGGGCTTCGGAGGC...GGGATTAAGTGCCTTGCCCAAGGTCAGGCTTATCTCCAGAGGGAGGTGCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR TCA 90 bp TCAGAGTGGCCTGGGGTCCTCGTCAGAGCCAGGTCAGTGAGCCTGAACTTGGCTGCTGGTTCCTCCAAGTaGGGGGAACACAGGCTGGAA +
Preference number: 2 (lower is better)
Translates to: SEWPGVLVRARSVSLNLAAGSSK*GEHRLE
Trigger: TTCCAGCCTGTGTTCCCCTCACTTGGAGGAACCAGC...AGCCAAGTTCAGGCTCACTGACCTGGCTCTGACGAGGACCCCAGGCCACTCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR TCA 90 bp TGGGAGAGGGCGAATCCTGGACCAGGGTCTTCAGAGCAAGTGAAACCCTCTCCATGTAGGCAGGGTCCCTaGACATCTGGGCCCCAGTCC +
Preference number: 2 (lower is better)
Translates to: WERANPGPGSSEQVKPSPCRQGP*TSGPQS
Trigger: GGACTGGGGCCCAGATGTTCAGGGACCCTGCCTACA...TGGAGAGGGTTTCACTTGCTCTGAAGACCCTGGTCCAGGATTCGCCCTCTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR GCA 90 bp GAGCCATGGCACTGTCCAAGGAAACCCGAAAGAGGCCCTGCAGCCTTGTCCCTATGCCTCTCAGCTGCCTaGACAGGTGTGGCCAGAGAG +
Preference number: 2 (lower is better)
Translates to: EPWHCPRKPERGPAALSLCLSAA*TGVARE
Trigger: CTCTCTGGCCACACCTGTGCAGGCAGCTGAGAGGCA...TAGGGACAAGGCTGCAGGGCCTCTTTCGGGTTTCCTTGGACAGTGCCATGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR GCA 90 bp AACCCGAAAGAGGCCCTGCAGCCTTGTCCCTACTCCAAGGTCTTCTCAGAGTGGGCCTCCGAAGCCCTCTaGTGCCCCAGTAAGGGACAG +
Preference number: 2 (lower is better)
Translates to: NPKEALQPCPYSKVFSEWASEAL*CPSKGQ
Trigger: CTGTCCCTTACTGGGGCAGCAGAGGGCTTCGGAGGC...CCACTCTGAGAAGACCTTGGAGTAGGGACAAGGCTGCAGGGCCTCTTTCGGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR CCA 90 bp CCACCAAGACCTCCCAGTCCTGTCCACTTAAGGTGTTGCAAAGGCTCTGCCAAGGGGTCCCTGAACATCTaGGCCCCAGTCCAGGGCACC +
Preference number: 2 (lower is better)
Translates to: PPRPPSPVHLRCCKGSAKGSLNI*APVQGT
Trigger: GGTGCCCTGGACTGGGGCCCAGATGTTCAGGGACCC...CTTGGCAGAGCCTTTGCAACACCTTAAGTGGACAGGACTGGGAGGTCTTGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR GCA 90 bp TGGCACTGTCCAAGGAAACCCGAAAGAGGCCCTGCAGCCTTGTCCCTACTCCAAAGTAGGGCTGCACGCTaGCTCTCAGCTGCCTGCACA +
Preference number: 2 (lower is better)
Translates to: WHCPRKPERGPAALSLLQSRAAR*LSAACT
Trigger: TGTGCAGGCAGCTGAGAGGCAGCGTGCAGCCCTACT...TTGGAGTAGGGACAAGGCTGCAGGGCCTCTTTCGGGTTTCCTTGGACAGTGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR GCA 90 bp CAACCACCAAGACCTCCCAGTCCTGTCCACTTAAGGTGTTGCAAAGGCTCTGCCCCCAGGCCTCACTTCTaGCTCCGAAGCCCTCTGCTG +
Preference number: 2 (lower is better)
Translates to: QPPRPPSPVHLRCCKGSAPRPHF*LRSPLL
Trigger: CAGCAGAGGGCTTCGGAGGCAGAAGTGAGGCCTGGG...GGCAGAGCCTTTGCAACACCTTAAGTGGACAGGACTGGGAGGTCTTGGTGGTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR CCA 90 bp TGGGGCACCAGTCTCCTCACCTGTGAAATGAGAAGTCTGGCCCAGCTACCCTCCGCCAGAGAGCAGGACTaGAGGGTTCCTTCTGGTACC +
Preference number: 2 (lower is better)
Translates to: WGTSLLTCEMRSLAQLPSAREQD*RVPSGT
Trigger: GGTACCAGAAGGAACCCTCCAGTCCTGCTCTCTGGC...GGAGGGTAGCTGGGCCAGACTTCTCATTTCACAGGTGAGGAGACTGGTGCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR CAA 90 bp AGGCAGCTTCAGAGGCCTGGTCTTTGCCCTAAGCCTGATGCTGACTaGAAGGCATGGGAGAGGGCGAATCCTGGACCAGGGTCTTCAGAG +
Preference number: 2 (lower is better)
Translates to: RQLQRPGLCPKPDAD*KAWERANPGPGSSE
Trigger: CTCTGAAGACCCTGGTCCAGGATTCGCCCTCTCCCATGCCTTCAAGTCAGCATCAGGCTTAGGGCAAAGACCAGGCCTCTGAAGCTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR GCA 90 bp GCCAGAGAGCAGGACTGGAGGGTTCCTTCTGGTACCTTCTTGAAGGGCTCCCAAACCCGAAAGAGGCCCTaGAGCCTTGTCCCTACTCCA +
Preference number: 2 (lower is better)
Translates to: AREQDWRVPSGTFLKGSQTRKRP*SLVPTP
Trigger: TGGAGTAGGGACAAGGCTGCAGGGCCTCTTTCGGGT...TTGGGAGCCCTTCAAGAAGGTACCAGAAGGAACCCTCCAGTCCTGCTCTCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR CCA 90 bp TCCTGTCCACTTAAGGTGTTGCAAAGGCTCTGCCAAGACTCTCACCCAGTCTTGGAGGGGAACACAGGCTaGAAGCCTCCCTGCCCTGGC +
Preference number: 2 (lower is better)
Translates to: SCPLKVLQRLCQDSHPVLEGNTG*KPPCPG
Trigger: GCCAGGGCAGGGAGGCTTCCAGCCTGTGTTCCCCTC...CAAGACTGGGTGAGAGTCTTGGCAGAGCCTTTGCAACACCTTAAGTGGACAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR CCA 90 bp TGGGAGAGGGCGAATCCTGGACCAGGGTCTTCAGAGCAAGTGAAACCCTCTCCAGCCAGAGAGCAGGACTaGAGGGTTCCTTCTGGTACC +
Preference number: 2 (lower is better)
Translates to: WERANPGPGSSEQVKPSPAREQD*RVPSGT
Trigger: GGTACCAGAAGGAACCCTCCAGTCCTGCTCTCTGGC...TGGAGAGGGTTTCACTTGCTCTGAAGACCCTGGTCCAGGATTCGCCCTCTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR CCA 90 bp AACCCGAAAGAGGCCCTGCAGCCTTGTCCCTACTCCAAGGTCTTCTCAGAGTGGGTGACACCAGAGCACTaGAGCCATGGCACTGTCCAA +
Preference number: 2 (lower is better)
Translates to: NPKEALQPCPYSKVFSEWVTPEH*SHGTVQ
Trigger: TTGGACAGTGCCATGGCTCCAGTGCTCTGGTGTCAC...CCACTCTGAGAAGACCTTGGAGTAGGGACAAGGCTGCAGGGCCTCTTTCGGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR CCA 90 bp CCTCTGAGTCATAGGGACAAAGCCATACTTGGCAGTCCTCACGTTACTGGTTACGGGTCCCTGAACATCTaGGCCCCAGTCCAGGGCACC +
Preference number: 2 (lower is better)
Translates to: PLSHRDKAILGSPHVTGYGSLNI*APVQGT
Trigger: GGTGCCCTGGACTGGGGCCCAGATGTTCAGGGACCC...GTAACCAGTAACGTGAGGACTGCCAAGTATGGCTTTGTCCCTATGACTCAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR CAA 90 bp TTGGCTCCAACCACCAAGACCTCCCAGTCCTGTCCACTTAAGGTGTaGCAAAGGCTCTGCCAAGACTCTCACCCAGTCTTGGGCCCATCT +
Preference number: 2 (lower is better)
Translates to: LAPTTKTSQSCPLKV*QRLCQDSHPVLGPS
Trigger: AGATGGGCCCAAGACTGGGTGAGAGTCTTGGCAGAGCCTTTGCAACACCTTAAGTGGACAGGACTGGGAGGTCTTGGTGGTTGGAGCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR TCA 90 bp GCTGACTTGAAGGCATGGGAGAGGGCGAATCCTGGACCAGGGTCTTCAGAGCAACAGTCTCCTCACCTGTaGAATGAGAAGTCTGGCCCA +
Preference number: 2 (lower is better)
Translates to: ADLKAWERANPGPGSSEQQSPHL*NEKSGP
Trigger: TGGGCCAGACTTCTCATTTCACAGGTGAGGAGACTG...TTGCTCTGAAGACCCTGGTCCAGGATTCGCCCTCTCCCATGCCTTCAAGTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR TCA 90 bp TCTTCAGAGCAAGTGAAACCCTCTCCAAGTGTTGACCTTGGAGGCTGTCTCTTCTGTAGGCAGGGTCCCTaGACATCTGGGCCCCAGTCC +
Preference number: 2 (lower is better)
Translates to: SSEQVKPSPSVDLGGCLFCRQGP*TSGPQS
Trigger: GGACTGGGGCCCAGATGTTCAGGGACCCTGCCTACA...GAAGAGACAGCCTCCAAGGTCAACACTTGGAGAGGGTTTCACTTGCTCTGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR TCA 90 bp GCTGACTTTGACATCTTCCTGCATGAATTACAAGAGGCAGCTTCAGAGGCCTGGTGTAGGCAGGGTCCCTaGACATCTGGGCCCCAGTCC +
Preference number: 2 (lower is better)
Translates to: ADFDIFLHELQEAASEAWCRQGP*TSGPQS
Trigger: GGACTGGGGCCCAGATGTTCAGGGACCCTGCCTACA...CCAGGCCTCTGAAGCTGCCTCTTGTAATTCATGCAGGAAGATGTCAAAGTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR GCA 90 bp TCTTCAGAGCAAGTGAAACCCTCTCCAAGTGTTGACCTTGGAGGCTGTCTCTTCACGCTGCCTCTCAGCTaGCTGCACAGGTGTGGCCAG +
Preference number: 2 (lower is better)
Translates to: SSEQVKPSPSVDLGGCLFTLPLS*LHRCGQ
Trigger: CTGGCCACACCTGTGCAGGCAGCTGAGAGGCAGCGT...GAAGAGACAGCCTCCAAGGTCAACACTTGGAGAGGGTTTCACTTGCTCTGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR GCA 90 bp CCTCTGAGTCATAGGGACAAAGCCATACTTGGCAGTCCTCACGTTACTGGTTACGCCTCCGAAGCCCTCTaGTGCCCCAGTAAGGGACAG +
Preference number: 2 (lower is better)
Translates to: PLSHRDKAILGSPHVTGYASEAL*CPSKGQ
Trigger: CTGTCCCTTACTGGGGCAGCAGAGGGCTTCGGAGGC...GTAACCAGTAACGTGAGGACTGCCAAGTATGGCTTTGTCCCTATGACTCAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR CCA 90 bp ATGAGAGAAGCAGAGTCAGGTTTCAAGCAGATTGGGGTCAGACAAGCAACCTTGGAGGGGAACACAGGCTaGAAGCCTCCCTGCCCTGGC +
Preference number: 2 (lower is better)
Translates to: MREAESGFKQIGVRQATLEGNTG*KPPCPG
Trigger: GCCAGGGCAGGGAGGCTTCCAGCCTGTGTTCCCCTC...CAAGGTTGCTTGTCTGACCCCAATCTGCTTGAAACCTGACTCTGCTTCTCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR CCA 90 bp GCTGACTTGAAGGCATGGGAGAGGGCGAATCCTGGACCAGGGTCTTCAGAGCAAAAGGATGGAGAGTGCTaGTTCCTCCAAGTGAGGGGA +
Preference number: 2 (lower is better)
Translates to: ADLKAWERANPGPGSSEQKDGEC*FLQVRG
Trigger: TCCCCTCACTTGGAGGAACCAGCACTCTCCATCCTT...TTGCTCTGAAGACCCTGGTCCAGGATTCGCCCTCTCCCATGCCTTCAAGTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR CCA 90 bp CTGGGCCCCAGTCCAGGGCACCTCCCTCTGGAGATAAGCCTGACCTTGGGCAAGCATGCCAGGACAACATaGGAGGATGTAAAGCTTATA +
Preference number: 2 (lower is better)
Translates to: LGPSPGHLPLEISLTLGKHARTT*EDVKLI
Trigger: TATAAGCTTTACATCCTCCCATGTTGTCCTGGCATG...CTTGCCCAAGGTCAGGCTTATCTCCAGAGGGAGGTGCCCTGGACTGGGGCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR TCA 90 bp TGGGAGAGGGCGAATCCTGGACCAGGGTCTTCAGAGCAAGTGAAACCCTCTCCAGCTTACCAGTGCTGCTaGCTTTGCCGTGAGCATTTT +
Preference number: 2 (lower is better)
Translates to: WERANPGPGSSEQVKPSPAYQCC*LCREHF
Trigger: AAAATGCTCACGGCAAAGTCAGCAGCACTGGTAAGC...TGGAGAGGGTTTCACTTGCTCTGAAGACCCTGGTCCAGGATTCGCCCTCTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR TCA 90 bp CCACCAAGACCTCCCAGTCCTGTCCACTTAAGGTGTTGCAAAGGCTCTGCCAAGTCCTCACCTGTGAAATaGGAAGTCTGGCCCAGCTAC +
Preference number: 2 (lower is better)
Translates to: PPRPPSPVHLRCCKGSAKSSPVK*EVWPSY
Trigger: GTAGCTGGGCCAGACTTCTCATTTCACAGGTGAGGA...CTTGGCAGAGCCTTTGCAACACCTTAAGTGGACAGGACTGGGAGGTCTTGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR GCA 90 bp ATGAGAGAAGCAGAGTCAGGTTTCAAGCAGATTGGGGTCAGACAAGCAACCTTGCCCAGGCCTCACTTCTaGCTCCGAAGCCCTCTGCTG +
Preference number: 2 (lower is better)
Translates to: MREAESGFKQIGVRQATLPRPHF*LRSPLL
Trigger: CAGCAGAGGGCTTCGGAGGCAGAAGTGAGGCCTGGG...CAAGGTTGCTTGTCTGACCCCAATCTGCTTGAAACCTGACTCTGCTTCTCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR GCA 90 bp TGCATTAGGGTTCTAAAATCCTGCGAGTCCATAAGAAAGGACACAGGTGACCCCCCCAGGCCTCACTTCTaGCTCCGAAGCCCTCTGCTG +
Preference number: 2 (lower is better)
Translates to: CIRVLKSCESIRKDTGDPPRPHF*LRSPLL
Trigger: CAGCAGAGGGCTTCGGAGGCAGAAGTGAGGCCTGGG...GGGGTCACCTGTGTCCTTTCTTATGGACTCGCAGGATTTTAGAACCCTAATGCA
54% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR GCA 90 bp CCTCTGAGTCATAGGGACAAAGCCATACTTGGCAGTCCTCACGTTACTGGTTACCTAGGCCCCCAGGACTaGAGGGAAGTCACCCCATAC +
Preference number: 2 (lower is better)
Translates to: PLSHRDKAILGSPHVTGYLGPQD*REVTPY
Trigger: GTATGGGGTGACTTCCCTGCAGTCCTGGGGGCCTAG...GTAACCAGTAACGTGAGGACTGCCAAGTATGGCTTTGTCCCTATGACTCAGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR GCA 90 bp CCACCAAGACCTCCCAGTCCTGTCCACTTAAGGTGTTGCAAAGGCTCTGCCAAGGTGTTGCAAAGGCTCTaGCAAGACTCTCACCCAGTC +
Preference number: 2 (lower is better)
Translates to: PPRPPSPVHLRCCKGSAKVLQRL*QDSHPV
Trigger: GACTGGGTGAGAGTCTTGGCAGAGCCTTTGCAACAC...CTTGGCAGAGCCTTTGCAACACCTTAAGTGGACAGGACTGGGAGGTCTTGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR TCA 90 bp CACCTCCCTCTGGAGATAAGCCTGACCTTGGGCAAGGCACTTAATCCCTGTGGGAGATCTGGGGAGAGATaGGTTAGACCGTGTATACTG +
Preference number: 2 (lower is better)
Translates to: HLPLEISLTLGKALNPCGRSGER*VRPCIL
Trigger: CAGTATACACGGTCTAACTCATCTCTCCCCAGATCT...CCCACAGGGATTAAGTGCCTTGCCCAAGGTCAGGCTTATCTCCAGAGGGAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000247291.8
ENST00000372298.1
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR GCA 90 bp GCAGAGTCAGGTTTCAAGCAGATTGGGGTCAGACAAGCAACCTTGTATTTCTCAACGCTGCCTCTCAGCTaGCTGCACAGGTGTGGCCAG +
Preference number: 2 (lower is better)
Translates to: AESGFKQIGVRQATLYFSTLPLS*LHRCGQ
Trigger: CTGGCCACACCTGTGCAGGCAGCTGAGAGGCAGCGT...TGAGAAATACAAGGTTGCTTGTCTGACCCCAATCTGCTTGAAACCTGACTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR CCA 90 bp ATGAGAGAAGCAGAGTCAGGTTTCAAGCAGATTGGGGTCAGACAAGCAACCTTGGAGGTGTGGAATGAGTaGGGATCAGCTGGGGCAGCG +
Preference number: 2 (lower is better)
Translates to: MREAESGFKQIGVRQATLEVWNE*GSAGAA
Trigger: CGCTGCCCCAGCTGATCCCCACTCATTCCACACCTC...CAAGGTTGCTTGTCTGACCCCAATCTGCTTGAAACCTGACTCTGCTTCTCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR CCA 90 bp GGCACCAGTCTCCTCACCTGTGAAATGAGAAGTCTGGCCCAGCTACCCTCCAGGAGGTTTCAAGCAGATTaGGGTCAGACAAGCAACCTT +
Preference number: 2 (lower is better)
Translates to: GTSLLTCEMRSLAQLPSRRFQAD*GQTSNL
Trigger: AAGGTTGCTTGTCTGACCCCAATCTGCTTGAAACCT...CCTGGAGGGTAGCTGGGCCAGACTTCTCATTTCACAGGTGAGGAGACTGGTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000247291.8
ENST00000372298.1
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR TCA 90 bp CAACCACCAAGACCTCCCAGTCCTGTCCACTTAAGGTGTTGCAAAGGCTCTGCCCTGCTGACTTTGCCGTaGGCATTTTACTCCTCATTC +
Preference number: 2 (lower is better)
Translates to: QPPRPPSPVHLRCCKGSALLTLP*AFYSSF
Trigger: GAATGAGGAGTAAAATGCTCACGGCAAAGTCAGCAG...GGCAGAGCCTTTGCAACACCTTAAGTGGACAGGACTGGGAGGTCTTGGTGGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR TCA 90 bp ATCAGCCAGTCATGGCCAAATAACCTCATTCCTGAACTGGTTGAAACCAGTGGGAGCCTGATGCTGACTTaGAGGCATGGGAGAGGGCGA +
Preference number: 2 (lower is better)
Translates to: ISQSWPNNLIPELVETSGSLMLT*RHGRGR
Trigger: TCGCCCTCTCCCATGCCTTCAAGTCAGCATCAGGCT...CCCACTGGTTTCAACCAGTTCAGGAATGAGGTTATTTGGCCATGACTGGCTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR GCA 90 bp ACCAGTGCTGCTGACTTTGCCGTGAGCATTTTACTCCTCATTCTCCCATCCTGGTTGAAGGGCTCCCAATaGCAAGCTCCTTTCCTTCCC +
Preference number: 2 (lower is better)
Translates to: TSAADFAVSILLLILPSWLKGSQ*QAPFLP
Trigger: GGGAAGGAAAGGAGCTTGGCATTGGGAGCCCTTCAA...CCAGGATGGGAGAATGAGGAGTAAAATGCTCACGGCAAAGTCAGCAGCACTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR GCA 90 bp GCAGAGTCAGGTTTCAAGCAGATTGGGGTCAGACAAGCAACCTTGTATTTCTCATGCCTCTCAGCTGCCTaGACAGGTGTGGCCAGAGAG +
Preference number: 2 (lower is better)
Translates to: AESGFKQIGVRQATLYFSCLSAA*TGVARE
Trigger: CTCTCTGGCCACACCTGTGCAGGCAGCTGAGAGGCA...TGAGAAATACAAGGTTGCTTGTCTGACCCCAATCTGCTTGAAACCTGACTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR CCA 90 bp ACCAGTGCTGCTGACTTTGCCGTGAGCATTTTACTCCTCATTCTCCCATCCTGGCTGGAGGGTTCCTTCTaGTACCTTCTTGAAGGGCTC +
Preference number: 2 (lower is better)
Translates to: TSAADFAVSILLLILPSWLEGSF*YLLEGL
Trigger: GAGCCCTTCAAGAAGGTACCAGAAGGAACCCTCCAG...CCAGGATGGGAGAATGAGGAGTAAAATGCTCACGGCAAAGTCAGCAGCACTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR CCA 90 bp GACAAGCAACCTTGTATTTCTCAGTCTTGGCTTACCAGTGCTGCTGACTTTGCCGCCAGAGAGCAGGACTaGAGGGTTCCTTCTGGTACC +
Preference number: 2 (lower is better)
Translates to: DKQPCISQSWLTSAADFAAREQD*RVPSGT
Trigger: GGTACCAGAAGGAACCCTCCAGTCCTGCTCTCTGGC...GGCAAAGTCAGCAGCACTGGTAAGCCAAGACTGAGAAATACAAGGTTGCTTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR CCA 90 bp CACCTCCCTCTGGAGATAAGCCTGACCTTGGGCAAGGCACTTAATCCCTGTGGGTGTATTTCTCAGTCTTaGCTTACCAGTGCTGCTGAC +
Preference number: 2 (lower is better)
Translates to: HLPLEISLTLGKALNPCGCISQS*LTSAAD
Trigger: GTCAGCAGCACTGGTAAGCCAAGACTGAGAAATACA...CCCACAGGGATTAAGTGCCTTGCCCAAGGTCAGGCTTATCTCCAGAGGGAGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000247291.8
ENST00000372298.1
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR TCA 90 bp CCTCTGAGTCATAGGGACAAAGCCATACTTGGCAGTCCTCACGTTACTGGTTACCCCACCCCCATTCAATaGGAAAACCCTCTCTTCTGC +
Preference number: 2 (lower is better)
Translates to: PLSHRDKAILGSPHVTGYPTPIQ*ENPLFC
Trigger: GCAGAAGAGAGGGTTTTCTCATTGAATGGGGGTGGG...GTAACCAGTAACGTGAGGACTGCCAAGTATGGCTTTGTCCCTATGACTCAGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR GCA 90 bp GACTGCAGGGAAGTCACCCCATACCTCCCCCTTCCTAACATTTATCTCATTGTCTTGAAGGGCTCCCAATaGCAAGCTCCTTTCCTTCCC +
Preference number: 2 (lower is better)
Translates to: DCREVTPYLPLPNIYLIVLKGSQ*QAPFLP
Trigger: GGGAAGGAAAGGAGCTTGGCATTGGGAGCCCTTCAA...GACAATGAGATAAATGTTAGGAAGGGGGAGGTATGGGGTGACTTCCCTGCAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR CCA 90 bp CTCATTCCTGAACTGGTTGAAACCAGTGGGTTAACCCAACCTGGCCATTTCCTCCTGGAGGGTTCCTTCTaGTACCTTCTTGAAGGGCTC +
Preference number: 2 (lower is better)
Translates to: LIPELVETSGLTQPGHFLLEGSF*YLLEGL
Trigger: GAGCCCTTCAAGAAGGTACCAGAAGGAACCCTCCAG...GAGGAAATGGCCAGGTTGGGTTAACCCACTGGTTTCAACCAGTTCAGGAATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR CCA 90 bp TGGGAGAGGGCGAATCCTGGACCAGGGTCTTCAGAGCAAGTGAAACCCTCTCCACATGCCAGGACAACATaGGAGGATGTAAAGCTTATA +
Preference number: 2 (lower is better)
Translates to: WERANPGPGSSEQVKPSPHARTT*EDVKLI
Trigger: TATAAGCTTTACATCCTCCCATGTTGTCCTGGCATG...TGGAGAGGGTTTCACTTGCTCTGAAGACCCTGGTCCAGGATTCGCCCTCTCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR CCA 90 bp CACCTCCCTCTGGAGATAAGCCTGACCTTGGGCAAGGCACTTAATCCCTGTGGGCATGCCAGGACAACATaGGAGGATGTAAAGCTTATA +
Preference number: 2 (lower is better)
Translates to: HLPLEISLTLGKALNPCGHARTT*EDVKLI
Trigger: TATAAGCTTTACATCCTCCCATGTTGTCCTGGCATG...CCCACAGGGATTAAGTGCCTTGCCCAAGGTCAGGCTTATCTCCAGAGGGAGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000247291.8
ENST00000372298.1
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR TCA 90 bp AAGATCAGCCAGTCATGGCCAAATAACCTCATTCCTGAACTGGTTGAAACCAGTGCTGGTTCCTCCAAGTaGGGGGAACACAGGCTGGAA +
Preference number: 2 (lower is better)
Translates to: KISQSWPNNLIPELVETSAGSSK*GEHRLE
Trigger: TTCCAGCCTGTGTTCCCCTCACTTGGAGGAACCAGC...ACTGGTTTCAACCAGTTCAGGAATGAGGTTATTTGGCCATGACTGGCTGATCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR TCA 90 bp ATGAGAGAAGCAGAGTCAGGTTTCAAGCAGATTGGGGTCAGACAAGCAACCTTGAAGGTGGAACAGCACTaGGCTGACCTTTCCCCCAAA +
Preference number: 2 (lower is better)
Translates to: MREAESGFKQIGVRQATLKVEQH*ADLSPK
Trigger: TTTGGGGGAAAGGTCAGCTCAGTGCTGTTCCACCTT...CAAGGTTGCTTGTCTGACCCCAATCTGCTTGAAACCTGACTCTGCTTCTCTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR TCA 90 bp AAGATCAGCCAGTCATGGCCAAATAACCTCATTCCTGAACTGGTTGAAACCAGTAGCCTGATGCTGACTTaGAGGCATGGGAGAGGGCGA +
Preference number: 2 (lower is better)
Translates to: KISQSWPNNLIPELVETSSLMLT*RHGRGR
Trigger: TCGCCCTCTCCCATGCCTTCAAGTCAGCATCAGGCT...ACTGGTTTCAACCAGTTCAGGAATGAGGTTATTTGGCCATGACTGGCTGATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR TCA 90 bp CCTCTGAGTCATAGGGACAAAGCCATACTTGGCAGTCCTCACGTTACTGGTTACAGGCCTGTGTGCATTTaGAGCAGATCCTTGAGCTCA +
Preference number: 2 (lower is better)
Translates to: PLSHRDKAILGSPHVTGYRPVCI*SRSLSS
Trigger: TGAGCTCAAGGATCTGCTTCAAATGCACACAGGCCT...GTAACCAGTAACGTGAGGACTGCCAAGTATGGCTTTGTCCCTATGACTCAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR GCA 90 bp AGTCCAGGGCACCTCCCTCTGGAGATAAGCCTGACCTTGGGCAAGGCACTTAATAGGGTTCTAAAATCCTaGGAGTCCATAAGAAAGGAC +
Preference number: 2 (lower is better)
Translates to: SPGHLPLEISLTLGKALNRVLKS*ESIRKD
Trigger: GTCCTTTCTTATGGACTCGCAGGATTTTAGAACCCT...ATTAAGTGCCTTGCCCAAGGTCAGGCTTATCTCCAGAGGGAGGTGCCCTGGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000247291.8
ENST00000372298.1
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR GCA 90 bp CAACCACCAAGACCTCCCAGTCCTGTCCACTTAAGGTGTTGCAAAGGCTCTGCCAGGGTTCTAAAATCCTaGGAGTCCATAAGAAAGGAC +
Preference number: 2 (lower is better)
Translates to: QPPRPPSPVHLRCCKGSARVLKS*ESIRKD
Trigger: GTCCTTTCTTATGGACTCGCAGGATTTTAGAACCCT...GGCAGAGCCTTTGCAACACCTTAAGTGGACAGGACTGGGAGGTCTTGGTGGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR TCA 90 bp ATGAGAGAAGCAGAGTCAGGTTTCAAGCAGATTGGGGTCAGACAAGCAACCTTGGCTTACCAGTGCTGCTaGCTTTGCCGTGAGCATTTT +
Preference number: 2 (lower is better)
Translates to: MREAESGFKQIGVRQATLAYQCC*LCREHF
Trigger: AAAATGCTCACGGCAAAGTCAGCAGCACTGGTAAGC...CAAGGTTGCTTGTCTGACCCCAATCTGCTTGAAACCTGACTCTGCTTCTCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000247291.8
ENST00000372298.1
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR GCA 90 bp CATTTATCTCATTGTCATTGTCTGGGTCTCACTTTCCTATTGGACTCTAAGTTCACGCTGCCTCTCAGCTaGCTGCACAGGTGTGGCCAG +
Preference number: 2 (lower is better)
Translates to: HLSHCHCLGLTFLLDSKFTLPLS*LHRCGQ
Trigger: CTGGCCACACCTGTGCAGGCAGCTGAGAGGCAGCGT...GAACTTAGAGTCCAATAGGAAAGTGAGACCCAGACAATGACAATGAGATAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR GCA 90 bp CTCATTCCTGAACTGGTTGAAACCAGTGGGTTAACCCAACCTGGCCATTTCCTCGTCCACTTAAGGTGTTaGAAAGGCTCTGCCAAGACT +
Preference number: 2 (lower is better)
Translates to: LIPELVETSGLTQPGHFLVHLRC*KGSAKT
Trigger: AGTCTTGGCAGAGCCTTTGCAACACCTTAAGTGGAC...GAGGAAATGGCCAGGTTGGGTTAACCCACTGGTTTCAACCAGTTCAGGAATGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR CCA 90 bp GCAGAGTCAGGTTTCAAGCAGATTGGGGTCAGACAAGCAACCTTGTATTTCTCAAAGGATGGAGAGTGCTaGTTCCTCCAAGTGAGGGGA +
Preference number: 2 (lower is better)
Translates to: AESGFKQIGVRQATLYFSKDGEC*FLQVRG
Trigger: TCCCCTCACTTGGAGGAACCAGCACTCTCCATCCTT...TGAGAAATACAAGGTTGCTTGTCTGACCCCAATCTGCTTGAAACCTGACTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR CCA 90 bp ATGAGAGAAGCAGAGTCAGGTTTCAAGCAGATTGGGGTCAGACAAGCAACCTTGAACCTCCCTAAAAGGTaGAACAGCACTGAGCTGACC +
Preference number: 2 (lower is better)
Translates to: MREAESGFKQIGVRQATLNLPKR*NSTELT
Trigger: GGTCAGCTCAGTGCTGTTCCACCTTTTAGGGAGGTT...CAAGGTTGCTTGTCTGACCCCAATCTGCTTGAAACCTGACTCTGCTTCTCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR TCA 90 bp ATTGTCATTGTCTGGGTCTCACTTTCCTATTGGACTCTAAGTTCCATGAATCTGGCTGGTTCCTCCAAGTaGGGGGAACACAGGCTGGAA +
Preference number: 2 (lower is better)
Translates to: IVIVWVSLSYWTLSSMNLAGSSK*GEHRLE
Trigger: TTCCAGCCTGTGTTCCCCTCACTTGGAGGAACCAGC...CAGATTCATGGAACTTAGAGTCCAATAGGAAAGTGAGACCCAGACAATGACAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR TCA 90 bp CCATACCTCCCCCTTCCTAACATTTATCTCATTGTCATTGTCTGGGTCTCACTTCTTCTGGTACCTTCTTaGAGGGCTCCCAATGCCAAG +
Preference number: 2 (lower is better)
Translates to: PYLPLPNIYLIVIVWVSLLLVPS*RAPNAK
Trigger: CTTGGCATTGGGAGCCCTTCAAGAAGGTACCAGAAG...AAGTGAGACCCAGACAATGACAATGAGATAAATGTTAGGAAGGGGGAGGTATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR TCA 90 bp ATGAGAGAAGCAGAGTCAGGTTTCAAGCAGATTGGGGTCAGACAAGCAACCTTGCTGCTGACTTTGCCGTaGGCATTTTACTCCTCATTC +
Preference number: 2 (lower is better)
Translates to: MREAESGFKQIGVRQATLLLTLP*AFYSSF
Trigger: GAATGAGGAGTAAAATGCTCACGGCAAAGTCAGCAG...CAAGGTTGCTTGTCTGACCCCAATCTGCTTGAAACCTGACTCTGCTTCTCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000247291.8
ENST00000372298.1
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR TCA 90 bp GCAGAGTCAGGTTTCAAGCAGATTGGGGTCAGACAAGCAACCTTGTATTTCTCAGCTTACCAGTGCTGCTaGCTTTGCCGTGAGCATTTT +
Preference number: 2 (lower is better)
Translates to: AESGFKQIGVRQATLYFSAYQCC*LCREHF
Trigger: AAAATGCTCACGGCAAAGTCAGCAGCACTGGTAAGC...TGAGAAATACAAGGTTGCTTGTCTGACCCCAATCTGCTTGAAACCTGACTCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000247291.8
ENST00000372298.1
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR TCA 90 bp GACAAGCAACCTTGTATTTCTCAGTCTTGGCTTACCAGTGCTGCTGACTTTGCCAGATCTGGGGAGAGATaGGTTAGACCGTGTATACTG +
Preference number: 2 (lower is better)
Translates to: DKQPCISQSWLTSAADFARSGER*VRPCIL
Trigger: CAGTATACACGGTCTAACTCATCTCTCCCCAGATCT...GGCAAAGTCAGCAGCACTGGTAAGCCAAGACTGAGAAATACAAGGTTGCTTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000247291.8
ENST00000372298.1
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR GCA 90 bp AATGTTTTGCTGGGGTTTAAACTTCAACTAGGCCTGTGTGCATTTGAAGCAGATACCCGAAAGAGGCCCTaGAGCCTTGTCCCTACTCCA +
Preference number: 2 (lower is better)
Translates to: NVLLGFKLQLGLCAFEADTRKRP*SLVPTP
Trigger: TGGAGTAGGGACAAGGCTGCAGGGCCTCTTTCGGGT...ATCTGCTTCAAATGCACACAGGCCTAGTTGAAGTTTAAACCCCAGCAAAACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR GCA 90 bp CTCATTCCTGAACTGGTTGAAACCAGTGGGTTAACCCAACCTGGCCATTTCCTCTTAGACCGTGTATACTaGACATGCCAGGACAACATG +
Preference number: 2 (lower is better)
Translates to: LIPELVETSGLTQPGHFLLDRVY*TCQDNM
Trigger: CATGTTGTCCTGGCATGTGCAGTATACACGGTCTAA...GAGGAAATGGCCAGGTTGGGTTAACCCACTGGTTTCAACCAGTTCAGGAATGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR GCA 90 bp AAGATCAGCCAGTCATGGCCAAATAACCTCATTCCTGAACTGGTTGAAACCAGTGTGTTGCAAAGGCTCTaGCAAGACTCTCACCCAGTC +
Preference number: 2 (lower is better)
Translates to: KISQSWPNNLIPELVETSVLQRL*QDSHPV
Trigger: GACTGGGTGAGAGTCTTGGCAGAGCCTTTGCAACAC...ACTGGTTTCAACCAGTTCAGGAATGAGGTTATTTGGCCATGACTGGCTGATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR CCA 90 bp TCCTCCCTTAAGGAGAATTCCTGCAGTCTTGTAGAACTGTGGAACTTACTGAAAGTGACACCAGAGCACTaGAGCCATGGCACTGTCCAA +
Preference number: 2 (lower is better)
Translates to: SSLKENSCSLVELWNLLKVTPEH*SHGTVQ
Trigger: TTGGACAGTGCCATGGCTCCAGTGCTCTGGTGTCAC...TTTCAGTAAGTTCCACAGTTCTACAAGACTGCAGGAATTCTCCTTAAGGGAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR CCA 90 bp TCTTCAGAGCAAGTGAAACCCTCTCCAAGTGTTGACCTTGGAGGCTGTCTCTTCTGTATTTCTCAGTCTTaGCTTACCAGTGCTGCTGAC +
Preference number: 2 (lower is better)
Translates to: SSEQVKPSPSVDLGGCLFCISQS*LTSAAD
Trigger: GTCAGCAGCACTGGTAAGCCAAGACTGAGAAATACA...GAAGAGACAGCCTCCAAGGTCAACACTTGGAGAGGGTTTCACTTGCTCTGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR CCA 90 bp GACTGCAGGGAAGTCACCCCATACCTCCCCCTTCCTAACATTTATCTCATTGTCAGGTTTCAAGCAGATTaGGGTCAGACAAGCAACCTT +
Preference number: 2 (lower is better)
Translates to: DCREVTPYLPLPNIYLIVRFQAD*GQTSNL
Trigger: AAGGTTGCTTGTCTGACCCCAATCTGCTTGAAACCT...GACAATGAGATAAATGTTAGGAAGGGGGAGGTATGGGGTGACTTCCCTGCAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR TCA 90 bp CATTTATCTCATTGTCATTGTCTGGGTCTCACTTTCCTATTGGACTCTAAGTTCAGAAGAGGTGTGGAATaGGTGGGGATCAGCTGGGGC +
Preference number: 2 (lower is better)
Translates to: HLSHCHCLGLTFLLDSKFRRGVE*VGISWG
Trigger: GCCCCAGCTGATCCCCACTCATTCCACACCTCTTCT...GAACTTAGAGTCCAATAGGAAAGTGAGACCCAGACAATGACAATGAGATAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR TCA 90 bp TCCTCCCTTAAGGAGAATTCCTGCAGTCTTGTAGAACTGTGGAACTTACTGAAAGCCTTCCTCTCTGAGTaGGGAACAGGGACACTGAAT +
Preference number: 2 (lower is better)
Translates to: SSLKENSCSLVELWNLLKAFLSE*GTGTLN
Trigger: ATTCAGTGTCCCTGTTCCTCACTCAGAGAGGAAGGC...TTTCAGTAAGTTCCACAGTTCTACAAGACTGCAGGAATTCTCCTTAAGGGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR GCA 90 bp CATTTATCTCATTGTCATTGTCTGGGTCTCACTTTCCTATTGGACTCTAAGTTCACCCGAAAGAGGCCCTaGAGCCTTGTCCCTACTCCA +
Preference number: 2 (lower is better)
Translates to: HLSHCHCLGLTFLLDSKFTRKRP*SLVPTP
Trigger: TGGAGTAGGGACAAGGCTGCAGGGCCTCTTTCGGGT...GAACTTAGAGTCCAATAGGAAAGTGAGACCCAGACAATGACAATGAGATAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR GCA 90 bp CCTCTGAGTCATAGGGACAAAGCCATACTTGGCAGTCCTCACGTTACTGGTTACCAGGGAGGAATGTTTTaGTGGGGTTTAAACTTCAAC +
Preference number: 2 (lower is better)
Translates to: PLSHRDKAILGSPHVTGYQGGMF*WGLNFN
Trigger: GTTGAAGTTTAAACCCCAGCAAAACATTCCTCCCTG...GTAACCAGTAACGTGAGGACTGCCAAGTATGGCTTTGTCCCTATGACTCAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR CCA 90 bp AAGATCAGCCAGTCATGGCCAAATAACCTCATTCCTGAACTGGTTGAAACCAGTAACCTCCCTAAAAGGTaGAACAGCACTGAGCTGACC +
Preference number: 2 (lower is better)
Translates to: KISQSWPNNLIPELVETSNLPKR*NSTELT
Trigger: GGTCAGCTCAGTGCTGTTCCACCTTTTAGGGAGGTT...ACTGGTTTCAACCAGTTCAGGAATGAGGTTATTTGGCCATGACTGGCTGATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR CCA 90 bp TGCATTAGGGTTCTAAAATCCTGCGAGTCCATAAGAAAGGACACAGGTGACCCCTGTATTTCTCAGTCTTaGCTTACCAGTGCTGCTGAC +
Preference number: 2 (lower is better)
Translates to: CIRVLKSCESIRKDTGDPCISQS*LTSAAD
Trigger: GTCAGCAGCACTGGTAAGCCAAGACTGAGAAATACA...GGGGTCACCTGTGTCCTTTCTTATGGACTCGCAGGATTTTAGAACCCTAATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000247291.8
ENST00000372298.1
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR TCA 90 bp TCCTCCCTTAAGGAGAATTCCTGCAGTCTTGTAGAACTGTGGAACTTACTGAAACCCTCCTGTCACCTCTaGGATCATCTTCTTCATCTC +
Preference number: 2 (lower is better)
Translates to: SSLKENSCSLVELWNLLKPSCHL*DHLLHL
Trigger: GAGATGAAGAAGATGATCTCAGAGGTGACAGGAGGG...TTTCAGTAAGTTCCACAGTTCTACAAGACTGCAGGAATTCTCCTTAAGGGAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372314.3
3UTR-3UTR GCA 90 bp TGCATTAGGGTTCTAAAATCCTGCGAGTCCATAAGAAAGGACACAGGTGACCCCAGGGTTCTAAAATCCTaGGAGTCCATAAGAAAGGAC +
Preference number: 2 (lower is better)
Translates to: CIRVLKSCESIRKDTGDPRVLKS*ESIRKD
Trigger: GTCCTTTCTTATGGACTCGCAGGATTTTAGAACCCT...GGGGTCACCTGTGTCCTTTCTTATGGACTCGCAGGATTTTAGAACCCTAATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000247291.8
ENST00000372298.1
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR CCA 90 bp ATCAGCCAGTCATGGCCAAATAACCTCATTCCTGAACTGGTTGAAACCAGTGGGCTCATTGTCATTGTCTaGGTCTCACTTTCCTATTGG +
Preference number: 2 (lower is better)
Translates to: ISQSWPNNLIPELVETSGLIVIV*VSLSYW
Trigger: CCAATAGGAAAGTGAGACCCAGACAATGACAATGAG...CCCACTGGTTTCAACCAGTTCAGGAATGAGGTTATTTGGCCATGACTGGCTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR TCA 90 bp CATTTATCTCATTGTCATTGTCTGGGTCTCACTTTCCTATTGGACTCTAAGTTCCAGTCTCCTCACCTGTaGAATGAGAAGTCTGGCCCA +
Preference number: 2 (lower is better)
Translates to: HLSHCHCLGLTFLLDSKFQSPHL*NEKSGP
Trigger: TGGGCCAGACTTCTCATTTCACAGGTGAGGAGACTG...GAACTTAGAGTCCAATAGGAAAGTGAGACCCAGACAATGACAATGAGATAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR GCA 90 bp AATGTTTTGCTGGGGTTTAAACTTCAACTAGGCCTGTGTGCATTTGAAGCAGATCGTGTATACTGCACATaGCAGGACAACATGGGAGGA +
Preference number: 2 (lower is better)
Translates to: NVLLGFKLQLGLCAFEADRVYCT*QDNMGG
Trigger: TCCTCCCATGTTGTCCTGGCATGTGCAGTATACACG...ATCTGCTTCAAATGCACACAGGCCTAGTTGAAGTTTAAACCCCAGCAAAACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR CCA 90 bp TCCTGTCCACTTAAGGTGTTGCAAAGGCTCTGCCAAGACTCTCACCCAGTCTTGTGTCCATTTCATTATTaGATTCTTAACTGTTGGCCT +
Preference number: 2 (lower is better)
Translates to: SCPLKVLQRLCQDSHPVLCPFHY*ILNCWP
Trigger: AGGCCAACAGTTAAGAATCCAATAATGAAATGGACA...CAAGACTGGGTGAGAGTCTTGGCAGAGCCTTTGCAACACCTTAAGTGGACAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR TCA 90 bp ATTGTCATTGTCTGGGTCTCACTTTCCTATTGGACTCTAAGTTCCATGAATCTGAGATCTGGGGAGAGATaGGTTAGACCGTGTATACTG +
Preference number: 2 (lower is better)
Translates to: IVIVWVSLSYWTLSSMNLRSGER*VRPCIL
Trigger: CAGTATACACGGTCTAACTCATCTCTCCCCAGATCT...CAGATTCATGGAACTTAGAGTCCAATAGGAAAGTGAGACCCAGACAATGACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR GCA 90 bp AATGTTTTGCTGGGGTTTAAACTTCAACTAGGCCTGTGTGCATTTGAAGCAGATGTCCACTTAAGGTGTTaGAAAGGCTCTGCCAAGACT +
Preference number: 2 (lower is better)
Translates to: NVLLGFKLQLGLCAFEADVHLRC*KGSAKT
Trigger: AGTCTTGGCAGAGCCTTTGCAACACCTTAAGTGGAC...ATCTGCTTCAAATGCACACAGGCCTAGTTGAAGTTTAAACCCCAGCAAAACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR CCA 90 bp AATGTTTTGCTGGGGTTTAAACTTCAACTAGGCCTGTGTGCATTTGAAGCAGATAGGTTTCAAGCAGATTaGGGTCAGACAAGCAACCTT +
Preference number: 2 (lower is better)
Translates to: NVLLGFKLQLGLCAFEADRFQAD*GQTSNL
Trigger: AAGGTTGCTTGTCTGACCCCAATCTGCTTGAAACCT...ATCTGCTTCAAATGCACACAGGCCTAGTTGAAGTTTAAACCCCAGCAAAACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR CCA 90 bp TTCCTGCAGTCTTGTAGAACTGTGGAACTTACTGAAATAAGCCTGACTGGTTCTCATGCCAGGACAACATaGGAGGATGTAAAGCTTATA +
Preference number: 2 (lower is better)
Translates to: FLQSCRTVELTEISLTGSHARTT*EDVKLI
Trigger: TATAAGCTTTACATCCTCCCATGTTGTCCTGGCATG...AGAACCAGTCAGGCTTATTTCAGTAAGTTCCACAGTTCTACAAGACTGCAGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR CCA 90 bp TCCTCCCTTAAGGAGAATTCCTGCAGTCTTGTAGAACTGTGGAACTTACTGAAACTCATTGTCATTGTCTaGGTCTCACTTTCCTATTGG +
Preference number: 2 (lower is better)
Translates to: SSLKENSCSLVELWNLLKLIVIV*VSLSYW
Trigger: CCAATAGGAAAGTGAGACCCAGACAATGACAATGAG...TTTCAGTAAGTTCCACAGTTCTACAAGACTGCAGGAATTCTCCTTAAGGGAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR CCA 90 bp AAACCCTCAATGACCAAACAAATGAGAGAGAGAGAGATCACAGTGTGTCAAGAAGGCTGTGAGCTTTTCTaGAAGGTTCTCTTCATCACT +
Preference number: 2 (lower is better)
Translates to: KPSMTKQMREREITVCQEGCELF*KVLFIT
Trigger: AGTGATGAAGAGAACCTTCCAGAAAAGCTCACAGCC...TTCTTGACACACTGTGATCTCTCTCTCTCTCATTTGTTTGGTCATTGAGGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372314.3
3UTR-3UTR CCA 90 bp AAGATCAGCCAGTCATGGCCAAATAACCTCATTCCTGAACTGGTTGAAACCAGTGTCTCACTTTCCTATTaGACTCTAAGTTCCATGAAT +
Preference number: 2 (lower is better)
Translates to: KISQSWPNNLIPELVETSVSLSY*TLSSMN
Trigger: ATTCATGGAACTTAGAGTCCAATAGGAAAGTGAGAC...ACTGGTTTCAACCAGTTCAGGAATGAGGTTATTTGGCCATGACTGGCTGATCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR GCA 90 bp TCCTCCCTTAAGGAGAATTCCTGCAGTCTTGTAGAACTGTGGAACTTACTGAAATTGGCCTACAGCAAGTaGTTAATAAATATGTTCAGT +
Preference number: 2 (lower is better)
Translates to: SSLKENSCSLVELWNLLKLAYSK*LINMFS
Trigger: ACTGAACATATTTATTAAGCACTTGCTGTAGGCCAA...TTTCAGTAAGTTCCACAGTTCTACAAGACTGCAGGAATTCTCCTTAAGGGAGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR TCA 72 bp CAGCCCACACTGGAAATGAGGTGTAGGCAGGGTCCCTaGACATCTGGGCCCCAGTCCAGGGCACCTCCCTCT +
Preference number: 3 (lower is better)
Translates to: QPTLEMRCRQGP*TSGPQSRAPPS
Trigger: AGAGGGAGGTGCCCTGGACTGGGGCCCAGATGTTCAGGGACCCTGCCTACACCTCATTTCCAGTGTGGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR CCA 72 bp CCCCGAGTGGCTGTGTCCTGGGTGACACCAGAGCACTaGAGCCATGGCACTGTCCAAGGAAACCCGAAAGAG +
Preference number: 3 (lower is better)
Translates to: PRVAVSWVTPEH*SHGTVQGNPKE
Trigger: CTCTTTCGGGTTTCCTTGGACAGTGCCATGGCTCCAGTGCTCTGGTGTCACCCAGGACACAGCCACTCGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR CAA 90 bp TCAGAGTGGCCTGGGGTCCTCGTCAGAGCCAGGTCAGTGAGCCTGAACTTGGCTCCTTCTGGTACCTTCTaGAAGGGCTCCCAATGCCAA +
Preference number: 3 (lower is better)
Translates to: SEWPGVLVRARSVSLNLAPSGTF*KGSQCQ
Trigger: TTGGCATTGGGAGCCCTTCAAGAAGGTACCAGAAGG...AGCCAAGTTCAGGCTCACTGACCTGGCTCTGACGAGGACCCCAGGCCACTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR TCA 72 bp AGAGGCCTGGTCTTTGCCCTAAGCCTGATGCTGACTTaGAGGCATGGGAGAGGGCGAATCCTGGACCAGGGT +
Preference number: 3 (lower is better)
Translates to: RGLVFALSLMLT*RHGRGRILDQG
Trigger: ACCCTGGTCCAGGATTCGCCCTCTCCCATGCCTTCAAGTCAGCATCAGGCTTAGGGCAAAGACCAGGCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR CAA 90 bp CCACCAAGACCTCCCAGTCCTGTCCACTTAAGGTGTTGCAAAGGCTCTGCCAAGAAGCCTGATGCTGACTaGAAGGCATGGGAGAGGGCG +
Preference number: 3 (lower is better)
Translates to: PPRPPSPVHLRCCKGSAKKPDAD*KAWERA
Trigger: CGCCCTCTCCCATGCCTTCAAGTCAGCATCAGGCTT...CTTGGCAGAGCCTTTGCAACACCTTAAGTGGACAGGACTGGGAGGTCTTGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR TCA 72 bp CACTTAATCCCTGTGGGGCACCAGTCTCCTCACCTGTaGAATGAGAAGTCTGGCCCAGCTACCCTCCAGGGT +
Preference number: 3 (lower is better)
Translates to: HLIPVGHQSPHL*NEKSGPATLQG
Trigger: ACCCTGGAGGGTAGCTGGGCCAGACTTCTCATTTCACAGGTGAGGAGACTGGTGCCCCACAGGGATTAAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000247291.8
ENST00000372298.1
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR GCA 72 bp GCCATGGCACTGTCCAAGGAAACCCGAAAGAGGCCCTaGAGCCTTGTCCCTACTCCAAGGTCTTCTCAGAGT +
Preference number: 3 (lower is better)
Translates to: AMALSKETRKRP*SLVPTPRSSQS
Trigger: ACTCTGAGAAGACCTTGGAGTAGGGACAAGGCTGCAGGGCCTCTTTCGGGTTTCCTTGGACAGTGCCATGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR CCA 72 bp GGTCTTTGCCCTAAGCCTGATGCTGACTTGAAGGCATaGGAGAGGGCGAATCCTGGACCAGGGTCTTCAGAG +
Preference number: 3 (lower is better)
Translates to: GLCPKPDADLKA*ERANPGPGSSE
Trigger: CTCTGAAGACCCTGGTCCAGGATTCGCCCTCTCCCATGCCTTCAAGTCAGCATCAGGCTTAGGGCAAAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR CAA 90 bp TCAGAGTGGCCTGGGGTCCTCGTCAGAGCCAGGTCAGTGAGCCTGAACTTGGCTCCTCTAGTTTTTGGTTaGATGTCAGCCCTTCTGCAC +
Preference number: 3 (lower is better)
Translates to: SEWPGVLVRARSVSLNLAPLVFG*MSALLH
Trigger: GTGCAGAAGGGCTGACATCAAACCAAAAACTAGAGG...AGCCAAGTTCAGGCTCACTGACCTGGCTCTGACGAGGACCCCAGGCCACTCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR CAA 90 bp AACCCGAAAGAGGCCCTGCAGCCTTGTCCCTACTCCAAGGTCTTCTCAGAGTGGCCTTCTGGTACCTTCTaGAAGGGCTCCCAATGCCAA +
Preference number: 3 (lower is better)
Translates to: NPKEALQPCPYSKVFSEWPSGTF*KGSQCQ
Trigger: TTGGCATTGGGAGCCCTTCAAGAAGGTACCAGAAGG...CCACTCTGAGAAGACCTTGGAGTAGGGACAAGGCTGCAGGGCCTCTTTCGGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR TCA 72 bp GAGAGCAGGACTGGAGGGTTCCTTCTGGTACCTTCTTaGAGGGCTCCCAATGCCAAGCTCCTTTCCTTCCCA +
Preference number: 3 (lower is better)
Translates to: ESRTGGFLLVPS*RAPNAKLLSFP
Trigger: TGGGAAGGAAAGGAGCTTGGCATTGGGAGCCCTTCAAGAAGGTACCAGAAGGAACCCTCCAGTCCTGCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR TCA 72 bp AGGGTCTTCAGAGCAAGTGAAACCCTCTCCAAGTGTTaGCCTTGGAGGCTGTCTCTTCCCAGCCCTTCCCTG +
Preference number: 3 (lower is better)
Translates to: RVFRASETLSKC*PWRLSLPSPSL
Trigger: CAGGGAAGGGCTGGGAAGAGACAGCCTCCAAGGTCAACACTTGGAGAGGGTTTCACTTGCTCTGAAGACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR GCA 72 bp CCACCAAGACCTCCCAGTCCTGTCCACTTAAGGTGTTaGAAAGGCTCTGCCAAGACTCTCACCCAGTCTTGG +
Preference number: 3 (lower is better)
Translates to: PPRPPSPVHLRC*KGSAKTLTQSW
Trigger: CCAAGACTGGGTGAGAGTCTTGGCAGAGCCTTTGCAACACCTTAAGTGGACAGGACTGGGAGGTCTTGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR CAA 90 bp GAGCCATGGCACTGTCCAAGGAAACCCGAAAGAGGCCCTGCAGCCTTGTCCCTACCTCTAGTTTTTGGTTaGATGTCAGCCCTTCTGCAC +
Preference number: 3 (lower is better)
Translates to: EPWHCPRKPERGPAALSLPLVFG*MSALLH
Trigger: GTGCAGAAGGGCTGACATCAAACCAAAAACTAGAGG...TAGGGACAAGGCTGCAGGGCCTCTTTCGGGTTTCCTTGGACAGTGCCATGGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR CAA 90 bp TCCTGTCCACTTAAGGTGTTGCAAAGGCTCTGCCAAGACTCTCACCCAGTCTTGAAGCCTGATGCTGACTaGAAGGCATGGGAGAGGGCG +
Preference number: 3 (lower is better)
Translates to: SCPLKVLQRLCQDSHPVLKPDAD*KAWERA
Trigger: CGCCCTCTCCCATGCCTTCAAGTCAGCATCAGGCTT...CAAGACTGGGTGAGAGTCTTGGCAGAGCCTTTGCAACACCTTAAGTGGACAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR TCA 72 bp CTTACCTGTTTTCCTCCCTCAATCTGCTATCAGAGGTaGCTAAGGAGCCGCAGGGAACCCACGTTGGCTCCA +
Preference number: 3 (lower is better)
Translates to: LTCFPPSICYQR*LRSRREPTLAP
Trigger: TGGAGCCAACGTGGGTTCCCTGCGGCTCCTTAGTCACCTCTGATAGCAGATTGAGGGAGGAAAACAGGTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR CAA 90 bp GCTGACTTTGACATCTTCCTGCATGAATTACAAGAGGCAGCTTCAGAGGCCTGGAGAGGCCCTGCAGCCTaGTCCCTACTCCAAGGTCTT +
Preference number: 3 (lower is better)
Translates to: ADFDIFLHELQEAASEAWRGPAA*SLLQGL
Trigger: AAGACCTTGGAGTAGGGACAAGGCTGCAGGGCCTCT...CCAGGCCTCTGAAGCTGCCTCTTGTAATTCATGCAGGAAGATGTCAAAGTCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR TCA 72 bp AGAGAAGTAAGAGTCCTAGAACCAAGAGCCACAACCTaGAATAGATGCAGACTGCCCCCGCCCTCCTTCCAG +
Preference number: 3 (lower is better)
Translates to: REVRVLEPRATT*NRCRLPPPSFQ
Trigger: CTGGAAGGAGGGCGGGGGCAGTCTGCATCTATTTCAGGTTGTGGCTCTTGGTTCTAGGACTCTTACTTCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR CAA 90 bp AGTCCAGGGCACCTCCCTCTGGAGATAAGCCTGACCTTGGGCAAGGCACTTAATTCAGTGAGCCTGAACTaGGCTTGGAGACTTTCTGAA +
Preference number: 3 (lower is better)
Translates to: SPGHLPLEISLTLGKALNSVSLN*AWRLSE
Trigger: TTCAGAAAGTCTCCAAGCCAAGTTCAGGCTCACTGA...ATTAAGTGCCTTGCCCAAGGTCAGGCTTATCTCCAGAGGGAGGTGCCCTGGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR CAA 90 bp CTCATTCCTGAACTGGTTGAAACCAGTGGGTTAACCCAACCTGGCCATTTCCTCCTCCAAGTGTTGACCTaGGAGGCTGTCTCTTCCCAG +
Preference number: 3 (lower is better)
Translates to: LIPELVETSGLTQPGHFLLQVLT*EAVSSQ
Trigger: CTGGGAAGAGACAGCCTCCAAGGTCAACACTTGGAG...GAGGAAATGGCCAGGTTGGGTTAACCCACTGGTTTCAACCAGTTCAGGAATGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR CAA 90 bp CCTCTGAGTCATAGGGACAAAGCCATACTTGGCAGTCCTCACGTTACTGGTTACCTCCAAGTGTTGACCTaGGAGGCTGTCTCTTCCCAG +
Preference number: 3 (lower is better)
Translates to: PLSHRDKAILGSPHVTGYLQVLT*EAVSSQ
Trigger: CTGGGAAGAGACAGCCTCCAAGGTCAACACTTGGAG...GTAACCAGTAACGTGAGGACTGCCAAGTATGGCTTTGTCCCTATGACTCAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR CAA 90 bp CAACCACCAAGACCTCCCAGTCCTGTCCACTTAAGGTGTTGCAAAGGCTCTGCCGTCAGACAAGCAACCTaGTATTTCTCAGTCTTGGCT +
Preference number: 3 (lower is better)
Translates to: QPPRPPSPVHLRCCKGSAVRQAT*YFSVLA
Trigger: AGCCAAGACTGAGAAATACAAGGTTGCTTGTCTGAC...GGCAGAGCCTTTGCAACACCTTAAGTGGACAGGACTGGGAGGTCTTGGTGGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR CAA 90 bp CACCTCCCTCTGGAGATAAGCCTGACCTTGGGCAAGGCACTTAATCCCTGTGGGTCCATGTACTTCTCTTaGAAGGCTGTGAGCTTTTCT +
Preference number: 3 (lower is better)
Translates to: HLPLEISLTLGKALNPCGSMYFS*KAVSFS
Trigger: AGAAAAGCTCACAGCCTTCAAAGAGAAGTACATGGA...CCCACAGGGATTAAGTGCCTTGCCCAAGGTCAGGCTTATCTCCAGAGGGAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372314.3
3UTR-3UTR CAA 90 bp ACCAGTGCTGCTGACTTTGCCGTGAGCATTTTACTCCTCATTCTCCCATCCTGGTTGGGGCTGCTCTCGTaGGCTTTTCCTTCAAACATC +
Preference number: 3 (lower is better)
Translates to: TSAADFAVSILLLILPSWLGLLS*AFPSNI
Trigger: GATGTTTGAAGGAAAAGCCAACGAGAGCAGCCCCAA...CCAGGATGGGAGAATGAGGAGTAAAATGCTCACGGCAAAGTCAGCAGCACTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372314.3
3UTR TCA 72 bp CTTCATCCACCTGAATTTGCCCGACAAACCCTCCTCTaGGTCATAGGGACAAAGCCATACTTGGCAGTCCTC +
Preference number: 3 (lower is better)
Translates to: LHPPEFARQTLL*VIGTKPYLAVL
Trigger: GAGGACTGCCAAGTATGGCTTTGTCCCTATGACTCAGAGGAGGGTTTGTCGGGCAAATTCAGGTGGATGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR GCA 72 bp AGCTACCCTCCAGGGTGCATTAGGGTTCTAAAATCCTaGGAGTCCATAAGAAAGGACACAGGTGACCCCAGT +
Preference number: 3 (lower is better)
Translates to: SYPPGCIRVLKS*ESIRKDTGDPS
Trigger: ACTGGGGTCACCTGTGTCCTTTCTTATGGACTCGCAGGATTTTAGAACCCTAATGCACCCTGGAGGGTAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000247291.8
ENST00000372298.1
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR GCA 72 bp ATGAATTACAAGAGGCAGCTTCAGAGGCCTGGTCTTTaGCCTAAGCCTGATGCTGACTTGAAGGCATGGGAG +
Preference number: 3 (lower is better)
Translates to: MNYKRQLQRPGL*PKPDADLKAWE
Trigger: CTCCCATGCCTTCAAGTCAGCATCAGGCTTAGGGCAAAGACCAGGCCTCTGAAGCTGCCTCTTGTAATTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR GCA 72 bp AGAGATCTGGGGAGAGATGAGTTAGACCGTGTATACTaGACATGCCAGGACAACATGGGAGGATGTAAAGCT +
Preference number: 3 (lower is better)
Translates to: RDLGRDELDRVY*TCQDNMGGCKA
Trigger: AGCTTTACATCCTCCCATGTTGTCCTGGCATGTGCAGTATACACGGTCTAACTCATCTCTCCCCAGATCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000247291.8
ENST00000372298.1
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR CAA 90 bp TCCTGTCCACTTAAGGTGTTGCAAAGGCTCTGCCAAGACTCTCACCCAGTCTTGGGTCTCACTTTCCTATaGGACTCTAAGTTCCATGAA +
Preference number: 3 (lower is better)
Translates to: SCPLKVLQRLCQDSHPVLGLTFL*DSKFHE
Trigger: TTCATGGAACTTAGAGTCCAATAGGAAAGTGAGACC...CAAGACTGGGTGAGAGTCTTGGCAGAGCCTTTGCAACACCTTAAGTGGACAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR CAA 90 bp TTCCTGCAGTCTTGTAGAACTGTGGAACTTACTGAAATAAGCCTGACTGGTTCTCCTTCTGGTACCTTCTaGAAGGGCTCCCAATGCCAA +
Preference number: 3 (lower is better)
Translates to: FLQSCRTVELTEISLTGSPSGTF*KGSQCQ
Trigger: TTGGCATTGGGAGCCCTTCAAGAAGGTACCAGAAGG...AGAACCAGTCAGGCTTATTTCAGTAAGTTCCACAGTTCTACAAGACTGCAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR CAA 90 bp AATGTTTTGCTGGGGTTTAAACTTCAACTAGGCCTGTGTGCATTTGAAGCAGATCTCCAAGTGTTGACCTaGGAGGCTGTCTCTTCCCAG +
Preference number: 3 (lower is better)
Translates to: NVLLGFKLQLGLCAFEADLQVLT*EAVSSQ
Trigger: CTGGGAAGAGACAGCCTCCAAGGTCAACACTTGGAG...ATCTGCTTCAAATGCACACAGGCCTAGTTGAAGTTTAAACCCCAGCAAAACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR CAA 90 bp TCCTGTCCACTTAAGGTGTTGCAAAGGCTCTGCCAAGACTCTCACCCAGTCTTGTTTATCTCATTGTCATaGTCTGGGTCTCACTTTCCT +
Preference number: 3 (lower is better)
Translates to: SCPLKVLQRLCQDSHPVLFISLS*SGSHFP
Trigger: AGGAAAGTGAGACCCAGACAATGACAATGAGATAAA...CAAGACTGGGTGAGAGTCTTGGCAGAGCCTTTGCAACACCTTAAGTGGACAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR TCA 72 bp ACCTTGTATTTCTCAGTCTTGGCTTACCAGTGCTGCTaGCTTTGCCGTGAGCATTTTACTCCTCATTCTCCC +
Preference number: 3 (lower is better)
Translates to: TLYFSVLAYQCC*LCREHFTPHSP
Trigger: GGGAGAATGAGGAGTAAAATGCTCACGGCAAAGTCAGCAGCACTGGTAAGCCAAGACTGAGAAATACAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000247291.8
ENST00000372298.1
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR TCA 72 bp TCTAAAATCCTGCGAGTCCATAAGAAAGGACACAGGTaGCCCCAGTTCAATTCCCAAGCTCAAGGTTCTGAG +
Preference number: 3 (lower is better)
Translates to: SKILRVHKKGHR*PQFNSQAQGSE
Trigger: CTCAGAACCTTGAGCTTGGGAATTGAACTGGGGTCACCTGTGTCCTTTCTTATGGACTCGCAGGATTTTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000247291.8
ENST00000372298.1
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR TCA 72 bp GAAATAAGCCTGACTGGTTCTGCCTTCCTCTCTGAGTaGGGAACAGGGACACTGAATATGATGGGTAGTGAA +
Preference number: 3 (lower is better)
Translates to: EISLTGSAFLSE*GTGTLNMMGSE
Trigger: TTCACTACCCATCATATTCAGTGTCCCTGTTCCTCACTCAGAGAGGAAGGCAGAACCAGTCAGGCTTATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR CAA 90 bp CCATACCTCCCCCTTCCTAACATTTATCTCATTGTCATTGTCTGGGTCTCACTTTCAGTGAGCCTGAACTaGGCTTGGAGACTTTCTGAA +
Preference number: 3 (lower is better)
Translates to: PYLPLPNIYLIVIVWVSLSVSLN*AWRLSE
Trigger: TTCAGAAAGTCTCCAAGCCAAGTTCAGGCTCACTGA...AAGTGAGACCCAGACAATGACAATGAGATAAATGTTAGGAAGGGGGAGGTATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR GCA 72 bp CTGGGGAGAGATGAGTTAGACCGTGTATACTGCACATaGCAGGACAACATGGGAGGATGTAAAGCTTATAAT +
Preference number: 3 (lower is better)
Translates to: LGRDELDRVYCT*QDNMGGCKAYN
Trigger: ATTATAAGCTTTACATCCTCCCATGTTGTCCTGGCATGTGCAGTATACACGGTCTAACTCATCTCTCCCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000247291.8
ENST00000372298.1
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR CCA 72 bp TTGAAGCAGATCCTTGAGCTCAAGATCAGCCAGTCATaGCCAAATAACCTCATTCCTGAACTGGTTGAAACC +
Preference number: 3 (lower is better)
Translates to: LKQILELKISQS*PNNLIPELVET
Trigger: GGTTTCAACCAGTTCAGGAATGAGGTTATTTGGCCATGACTGGCTGATCTTGAGCTCAAGGATCTGCTTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR CAA 90 bp AATGTTTTGCTGGGGTTTAAACTTCAACTAGGCCTGTGTGCATTTGAAGCAGATTGTCCACTTAAGGTGTaGCAAAGGCTCTGCCAAGAC +
Preference number: 3 (lower is better)
Translates to: NVLLGFKLQLGLCAFEADCPLKV*QRLCQD
Trigger: GTCTTGGCAGAGCCTTTGCAACACCTTAAGTGGACA...ATCTGCTTCAAATGCACACAGGCCTAGTTGAAGTTTAAACCCCAGCAAAACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR CAA 90 bp TCCTCCCTTAAGGAGAATTCCTGCAGTCTTGTAGAACTGTGGAACTTACTGAAAGTCAGACAAGCAACCTaGTATTTCTCAGTCTTGGCT +
Preference number: 3 (lower is better)
Translates to: SSLKENSCSLVELWNLLKVRQAT*YFSVLA
Trigger: AGCCAAGACTGAGAAATACAAGGTTGCTTGTCTGAC...TTTCAGTAAGTTCCACAGTTCTACAAGACTGCAGGAATTCTCCTTAAGGGAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR CCA 72 bp CTCCCCCTTCCTAACATTTATCTCATTGTCATTGTCTaGGTCTCACTTTCCTATTGGACTCTAAGTTCCATG +
Preference number: 3 (lower is better)
Translates to: LPLPNIYLIVIV*VSLSYWTLSSM
Trigger: CATGGAACTTAGAGTCCAATAGGAAAGTGAGACCCAGACAATGACAATGAGATAAATGTTAGGAAGGGGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR CAA 90 bp TCCTCCCTTAAGGAGAATTCCTGCAGTCTTGTAGAACTGTGGAACTTACTGAAAACAGGGAGGAATGTTTaGCTGGGGTTTAAACTTCAA +
Preference number: 3 (lower is better)
Translates to: SSLKENSCSLVELWNLLKTGRNV*LGFKLQ
Trigger: TTGAAGTTTAAACCCCAGCAAAACATTCCTCCCTGT...TTTCAGTAAGTTCCACAGTTCTACAAGACTGCAGGAATTCTCCTTAAGGGAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR-3UTR CAA 90 bp TTCCTGCAGTCTTGTAGAACTGTGGAACTTACTGAAATAAGCCTGACTGGTTCTTTTATCTCATTGTCATaGTCTGGGTCTCACTTTCCT +
Preference number: 3 (lower is better)
Translates to: FLQSCRTVELTEISLTGSFISLS*SGSHFP
Trigger: AGGAAAGTGAGACCCAGACAATGACAATGAGATAAA...AGAACCAGTCAGGCTTATTTCAGTAAGTTCCACAGTTCTACAAGACTGCAGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR CCA 72 bp TATCTCATTGTCATTGTCTGGGTCTCACTTTCCTATTaGACTCTAAGTTCCATGAATCTGTCCATTTCATTA +
Preference number: 3 (lower is better)
Translates to: YLIVIVWVSLSY*TLSSMNLSISL
Trigger: TAATGAAATGGACAGATTCATGGAACTTAGAGTCCAATAGGAAAGTGAGACCCAGACAATGACAATGAGATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp ACCAGTCTCCTCACCTGTGAAATGAGAAGTCTGGCCCAGCTACCCTCCAGGGTGCGGGCTCCGGCTAGCTaGGTGTGGCCGCGGGACCGA +
Preference number: 4 (lower is better)
Translates to: TSLLTCEMRSLAQLPSRVRAPAS*VWPRDR
Trigger: TCGGTCCCGCGGCCACACGCAGCTAGCCGGAGCCCG...CACCCTGGAGGGTAGCTGGGCCAGACTTCTCATTTCACAGGTGAGGAGACTGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372309.7
CDS-3UTR TCA 90 bp CCGAGTGGCTGTGTCCTGGGTGACACCAGAGCACTGGAGCCATGGCACTGTCCATGTAGGCAGGGTCCCTaGACATCTGGGCCCCAGTCC +
Preference number: 4 (lower is better)
Translates to: PSGCVLGDTRALEPWHCPCRQGP*TSGPQS
Trigger: GGACTGGGGCCCAGATGTTCAGGGACCCTGCCTACA...TGGACAGTGCCATGGCTCCAGTGCTCTGGTGTCACCCAGGACACAGCCACTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp CCGAGTGGCTGTGTCCTGGGTGACACCAGAGCACTGGAGCCATGGCACTGTCCACCCAGGCCTCACTTCTaGCTCCGAAGCCCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: PSGCVLGDTRALEPWHCPPRPHF*LRSPLL
Trigger: CAGCAGAGGGCTTCGGAGGCAGAAGTGAGGCCTGGG...TGGACAGTGCCATGGCTCCAGTGCTCTGGTGTCACCCAGGACACAGCCACTCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp CAGGCCTCACTTCTGCCTCCGAAGCCCTCTGCTGCCCCAGTAAGGGACAGTAGGCCCAGGCCTCACTTCTaGCTCCGAAGCCCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: QASLLPPKPSAAPVRDSRPRPHF*LRSPLL
Trigger: CAGCAGAGGGCTTCGGAGGCAGAAGTGAGGCCTGGG...CCTACTGTCCCTTACTGGGGCAGCAGAGGGCTTCGGAGGCAGAAGTGAGGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp CACCTCCCTCTGGAGATAAGCCTGACCTTGGGCAAGGCACTTAATCCCTGTGGGGGAGGCACAGGCGCCTaGTCCGGGCTCCGGCTAGCT +
Preference number: 4 (lower is better)
Translates to: HLPLEISLTLGKALNPCGGGTGA*SGLRLA
Trigger: AGCTAGCCGGAGCCCGGACCAGGCGCCTGTGCCTCC...CCCACAGGGATTAAGTGCCTTGCCCAAGGTCAGGCTTATCTCCAGAGGGAGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000247291.8
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp TCAGAGTGGCCTGGGGTCCTCGTCAGAGCCAGGTCAGTGAGCCTGAACTTGGCTGAGGGGAACACAGGCTaGAAGCCTCCCTGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: SEWPGVLVRARSVSLNLAEGNTG*KPPCPG
Trigger: GCCAGGGCAGGGAGGCTTCCAGCCTGTGTTCCCCTC...AGCCAAGTTCAGGCTCACTGACCTGGCTCTGACGAGGACCCCAGGCCACTCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp AAACCCCAGGCCTCACTTCTGCCTCCGAAGCCCTCTGCTGCCCCAGTAAGGGACCTTGGAACCTGTTGCTaGGCTCGCCCGACATGGCGA +
Preference number: 4 (lower is better)
Translates to: KPQASLLPPKPSAAPVRDLGTCC*ARPTWR
Trigger: TCGCCATGTCGGGCGAGCTCAGCAACAGGTTCCAAG...GTCCCTTACTGGGGCAGCAGAGGGCTTCGGAGGCAGAAGTGAGGCCTGGGGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp GGCACCAGTCTCCTCACCTGTGAAATGAGAAGTCTGGCCCAGCTACCCTCCAGGGAGGGGAACACAGGCTaGAAGCCTCCCTGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: GTSLLTCEMRSLAQLPSREGNTG*KPPCPG
Trigger: GCCAGGGCAGGGAGGCTTCCAGCCTGTGTTCCCCTC...CCTGGAGGGTAGCTGGGCCAGACTTCTCATTTCACAGGTGAGGAGACTGGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp TGGGGCACCAGTCTCCTCACCTGTGAAATGAGAAGTCTGGCCCAGCTACCCTCCTCTCCTGCCGGGCTTTaGGCAAGCCGAACGCCTTCC +
Preference number: 4 (lower is better)
Translates to: WGTSLLTCEMRSLAQLPSSPAGL*ASRTPS
Trigger: GGAAGGCGTTCGGCTTGCTCAAAGCCCGGCAGGAGA...GGAGGGTAGCTGGGCCAGACTTCTCATTTCACAGGTGAGGAGACTGGTGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000247291.8
ENST00000372298.1
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp GAGCCATGGCACTGTCCAAGGAAACCCGAAAGAGGCCCTGCAGCCTTGTCCCTATCTCCTGCCGGGCTTTaGGCAAGCCGAACGCCTTCC +
Preference number: 4 (lower is better)
Translates to: EPWHCPRKPERGPAALSLSPAGL*ASRTPS
Trigger: GGAAGGCGTTCGGCTTGCTCAAAGCCCGGCAGGAGA...TAGGGACAAGGCTGCAGGGCCTCTTTCGGGTTTCCTTGGACAGTGCCATGGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp AGGCCCTGCAGCCTTGTCCCTACTCCAAGGTCTTCTCAGAGTGGCCTGGGGTCCACCCGAAAGAGGCCCTaGAGCCTTGTCCCTACTCCA +
Preference number: 4 (lower is better)
Translates to: RPCSLVPTPRSSQSGLGSTRKRP*SLVPTP
Trigger: TGGAGTAGGGACAAGGCTGCAGGGCCTCTTTCGGGT...GGACCCCAGGCCACTCTGAGAAGACCTTGGAGTAGGGACAAGGCTGCAGGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp TGGGGCACCAGTCTCCTCACCTGTGAAATGAGAAGTCTGGCCCAGCTACCCTCCGCCTCCGAAGCCCTCTaGTGCCCCAGTAAGGGACAG +
Preference number: 4 (lower is better)
Translates to: WGTSLLTCEMRSLAQLPSASEAL*CPSKGQ
Trigger: CTGTCCCTTACTGGGGCAGCAGAGGGCTTCGGAGGC...GGAGGGTAGCTGGGCCAGACTTCTCATTTCACAGGTGAGGAGACTGGTGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp CCCAGTCCAGGGCACCTCCCTCTGGAGATAAGCCTGACCTTGGGCAAGGCACTTCTAGGCCCCCAGGACTaGAGGGAAGTCACCCCATAC +
Preference number: 4 (lower is better)
Translates to: PSPGHLPLEISLTLGKALLGPQD*REVTPY
Trigger: GTATGGGGTGACTTCCCTGCAGTCCTGGGGGCCTAG...AAGTGCCTTGCCCAAGGTCAGGCTTATCTCCAGAGGGAGGTGCCCTGGACTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp CAGGCCTCACTTCTGCCTCCGAAGCCCTCTGCTGCCCCAGTAAGGGACAGTAGGAGCTGGGGCCACACCTaGTTGCTCTCCTCCCTTAAG +
Preference number: 4 (lower is better)
Translates to: QASLLPPKPSAAPVRDSRSWGHT*LLSSLK
Trigger: CTTAAGGGAGGAGAGCAAGCAGGTGTGGCCCCAGCT...CCTACTGTCCCTTACTGGGGCAGCAGAGGGCTTCGGAGGCAGAAGTGAGGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp CCGAGTGGCTGTGTCCTGGGTGACACCAGAGCACTGGAGCCATGGCACTGTCCAGAAATAGATGCAGACTaGCCCCGCCCTCCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: PSGCVLGDTRALEPWHCPEIDAD*PRPPSR
Trigger: CCTGGAAGGAGGGCGGGGGCAGTCTGCATCTATTTC...TGGACAGTGCCATGGCTCCAGTGCTCTGGTGTCACCCAGGACACAGCCACTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp TCAGAGTGGCCTGGGGTCCTCGTCAGAGCCAGGTCAGTGAGCCTGAACTTGGCTCTGCGGCTCCCTCCCTaGACAGTACCGGTTGATCTC +
Preference number: 4 (lower is better)
Translates to: SEWPGVLVRARSVSLNLALRLPP*TVPVDL
Trigger: GAGATCAACCGGTACTGTGCAGGGAGGGAGCCGCAG...AGCCAAGTTCAGGCTCACTGACCTGGCTCTGACGAGGACCCCAGGCCACTCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372309.7
CDS-3UTR CCA 90 bp GGCACCAGTCTCCTCACCTGTGAAATGAGAAGTCTGGCCCAGCTACCCTCCAGGGGGGGCCAACTGGCTTaGGGCTGCTCTCGTTGGCTT +
Preference number: 4 (lower is better)
Translates to: GTSLLTCEMRSLAQLPSRGGQLA*GCSRWL
Trigger: AAGCCAACGAGAGCAGCCCCAAGCCAGTTGGCCCCC...CCTGGAGGGTAGCTGGGCCAGACTTCTCATTTCACAGGTGAGGAGACTGGTGCC
61% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp TGGGGCACCAGTCTCCTCACCTGTGAAATGAGAAGTCTGGCCCAGCTACCCTCCGGGGGCCAACTGGCTTaGGGCTGCTCTCGTTGGCTT +
Preference number: 4 (lower is better)
Translates to: WGTSLLTCEMRSLAQLPSGGQLA*GCSRWL
Trigger: AAGCCAACGAGAGCAGCCCCAAGCCAGTTGGCCCCC...GGAGGGTAGCTGGGCCAGACTTCTCATTTCACAGGTGAGGAGACTGGTGCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp TGGCACTGTCCAAGGAAACCCGAAAGAGGCCCTGCAGCCTTGTCCCTACTCCAAGGGTCCCTGAACATCTaGGCCCCAGTCCAGGGCACC +
Preference number: 4 (lower is better)
Translates to: WHCPRKPERGPAALSLLQGSLNI*APVQGT
Trigger: GGTGCCCTGGACTGGGGCCCAGATGTTCAGGGACCC...TTGGAGTAGGGACAAGGCTGCAGGGCCTCTTTCGGGTTTCCTTGGACAGTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp TCACAGTGTGTCAAGAAGGGCAGCAAGATCGGGAGGGAGGTATGGGGTGGGAAGGGGTCCCTGAACATCTaGGCCCCAGTCCAGGGCACC +
Preference number: 4 (lower is better)
Translates to: SQCVKKGSKIGREVWGGKGSLNI*APVQGT
Trigger: GGTGCCCTGGACTGGGGCCCAGATGTTCAGGGACCC...CTTCCCACCCCATACCTCCCTCCCGATCTTGCTGCCCTTCTTGACACACTGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp TCACAGTGTGTCAAGAAGGGCAGCAAGATCGGGAGGGAGGTATGGGGTGGGAAGGAAGTCACCCACACATaGGCCCACTGTCCGGGGGCC +
Preference number: 4 (lower is better)
Translates to: SQCVKKGSKIGREVWGGKEVTHT*AHCPGA
Trigger: GGCCCCCGGACAGTGGGCCCATGTGTGGGTGACTTC...CTTCCCACCCCATACCTCCCTCCCGATCTTGCTGCCCTTCTTGACACACTGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372301.2
CDS-3UTR TCA 90 bp GTGGCTGTGTCCTGGGTGACACCAGAGCACTGGAGCCATGGCACTGTCCAAGGAACAGAAACTCCCGGTTaGTCTCGGCCAGCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: VAVSWVTPEHWSHGTVQGTETPG*SRPASS
Trigger: AGAGGAGGCTGGCCGAGATCAACCGGGAGTTTCTGT...TCCTTGGACAGTGCCATGGCTCCAGTGCTCTGGTGTCACCCAGGACACAGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372314.3
CDS-3UTR TCA 90 bp AGAGGCCCTGCAGCCTTGTCCCTACTCCAAGGTCTTCTCAGAGTGGCCTGGGGTACAGAAACTCCCGGTTaGTCTCGGCCAGCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: RGPAALSLLQGLLRVAWGTETPG*SRPASS
Trigger: AGAGGAGGCTGGCCGAGATCAACCGGGAGTTTCTGT...ACCCCAGGCCACTCTGAGAAGACCTTGGAGTAGGGACAAGGCTGCAGGGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372314.3
CDS-3UTR TCA 90 bp AGAGGCCCTGCAGCCTTGTCCCTACTCCAAGGTCTTCTCAGAGTGGCCTGGGGTAGAAGAGGTGTGGAATaGGTGGGGATCAGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: RGPAALSLLQGLLRVAWGRRGVE*VGISWG
Trigger: GCCCCAGCTGATCCCCACTCATTCCACACCTCTTCT...ACCCCAGGCCACTCTGAGAAGACCTTGGAGTAGGGACAAGGCTGCAGGGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp CTGGGCCCCAGTCCAGGGCACCTCCCTCTGGAGATAAGCCTGACCTTGGGCAAGCTTCTGGTACCTTCTTaGAGGGCTCCCAATGCCAAG +
Preference number: 4 (lower is better)
Translates to: LGPSPGHLPLEISLTLGKLLVPS*RAPNAK
Trigger: CTTGGCATTGGGAGCCCTTCAAGAAGGTACCAGAAG...CTTGCCCAAGGTCAGGCTTATCTCCAGAGGGAGGTGCCCTGGACTGGGGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp AGAGGCCCTGCAGCCTTGTCCCTACTCCAAGGTCTTCTCAGAGTGGCCTGGGGTGGAACAGCACTGAGCTaGCCTTTCCCCCAAAACCCC +
Preference number: 4 (lower is better)
Translates to: RGPAALSLLQGLLRVAWGGTALS*PFPQNP
Trigger: GGGGTTTTGGGGGAAAGGTCAGCTCAGTGCTGTTCC...ACCCCAGGCCACTCTGAGAAGACCTTGGAGTAGGGACAAGGCTGCAGGGCCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp GTGGCTGTGTCCTGGGTGACACCAGAGCACTGGAGCCATGGCACTGTCCAAGGAAGCCTGATGCTGACTTaGAGGCATGGGAGAGGGCGA +
Preference number: 4 (lower is better)
Translates to: VAVSWVTPEHWSHGTVQGSLMLT*RHGRGR
Trigger: TCGCCCTCTCCCATGCCTTCAAGTCAGCATCAGGCT...TCCTTGGACAGTGCCATGGCTCCAGTGCTCTGGTGTCACCCAGGACACAGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp CTGGGCCCCAGTCCAGGGCACCTCCCTCTGGAGATAAGCCTGACCTTGGGCAAGCCAAGAGCCACAACCTaGAATAGATGCAGACTGCCC +
Preference number: 4 (lower is better)
Translates to: LGPSPGHLPLEISLTLGKPRATT*NRCRLP
Trigger: GGGCAGTCTGCATCTATTTCAGGTTGTGGCTCTTGG...CTTGCCCAAGGTCAGGCTTATCTCCAGAGGGAGGTGCCCTGGACTGGGGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp TCACAGTGTGTCAAGAAGGGCAGCAAGATCGGGAGGGAGGTATGGGGTGGGAAGACGCTGCCTCTCAGCTaGCTGCACAGGTGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: SQCVKKGSKIGREVWGGKTLPLS*LHRCGQ
Trigger: CTGGCCACACCTGTGCAGGCAGCTGAGAGGCAGCGT...CTTCCCACCCCATACCTCCCTCCCGATCTTGCTGCCCTTCTTGACACACTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp GCCAGAGAGCAGGACTGGAGGGTTCCTTCTGGTACCTTCTTGAAGGGCTCCCAACCCAGGCCTCACTTCTaGCTCCGAAGCCCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: AREQDWRVPSGTFLKGSQPRPHF*LRSPLL
Trigger: CAGCAGAGGGCTTCGGAGGCAGAAGTGAGGCCTGGG...TTGGGAGCCCTTCAAGAAGGTACCAGAAGGAACCCTCCAGTCCTGCTCTCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp AGAGGCCCTGCAGCCTTGTCCCTACTCCAAGGTCTTCTCAGAGTGGCCTGGGGTGAAATAGATGCAGACTaGCCCCGCCCTCCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: RGPAALSLLQGLLRVAWGEIDAD*PRPPSR
Trigger: CCTGGAAGGAGGGCGGGGGCAGTCTGCATCTATTTC...ACCCCAGGCCACTCTGAGAAGACCTTGGAGTAGGGACAAGGCTGCAGGGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp GTGGCTGTGTCCTGGGTGACACCAGAGCACTGGAGCCATGGCACTGTCCAAGGAGAAATAGATGCAGACTaGCCCCGCCCTCCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: VAVSWVTPEHWSHGTVQGEIDAD*PRPPSR
Trigger: CCTGGAAGGAGGGCGGGGGCAGTCTGCATCTATTTC...TCCTTGGACAGTGCCATGGCTCCAGTGCTCTGGTGTCACCCAGGACACAGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp GGCACCAGTCTCCTCACCTGTGAAATGAGAAGTCTGGCCCAGCTACCCTCCAGGGAGGTGTGGAATGAGTaGGGATCAGCTGGGGCAGCG +
Preference number: 4 (lower is better)
Translates to: GTSLLTCEMRSLAQLPSREVWNE*GSAGAA
Trigger: CGCTGCCCCAGCTGATCCCCACTCATTCCACACCTC...CCTGGAGGGTAGCTGGGCCAGACTTCTCATTTCACAGGTGAGGAGACTGGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp CCAGGGCACCTCCCTCTGGAGATAAGCCTGACCTTGGGCAAGGCACTTAATCCCGAGGTGTGGAATGAGTaGGGATCAGCTGGGGCAGCG +
Preference number: 4 (lower is better)
Translates to: PGHLPLEISLTLGKALNPEVWNE*GSAGAA
Trigger: CGCTGCCCCAGCTGATCCCCACTCATTCCACACCTC...GGGATTAAGTGCCTTGCCCAAGGTCAGGCTTATCTCCAGAGGGAGGTGCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR CAA 72 bp CAGAGGCCTGGTCTTTGCCCTAAGCCTGATGCTGACTaGAAGGCATGGGAGAGGGCGAATCCTGGACCAGGG +
Preference number: 4 (lower is better)
Translates to: QRPGLCPKPDAD*KAWERANPGPG
Trigger: CCCTGGTCCAGGATTCGCCCTCTCCCATGCCTTCAAGTCAGCATCAGGCTTAGGGCAAAGACCAGGCCTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp ACCAGTCTCCTCACCTGTGAAATGAGAAGTCTGGCCCAGCTACCCTCCAGGGTGCTTGGAACCTGTTGCTaGGCTCGCCCGACATGGCGA +
Preference number: 4 (lower is better)
Translates to: TSLLTCEMRSLAQLPSRVLGTCC*ARPTWR
Trigger: TCGCCATGTCGGGCGAGCTCAGCAACAGGTTCCAAG...CACCCTGGAGGGTAGCTGGGCCAGACTTCTCATTTCACAGGTGAGGAGACTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000247291.8
ENST00000372298.1
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp GGCACCAGTCTCCTCACCTGTGAAATGAGAAGTCTGGCCCAGCTACCCTCCAGGACAGAAACTCCCGGTTaGTCTCGGCCAGCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: GTSLLTCEMRSLAQLPSRTETPG*SRPASS
Trigger: AGAGGAGGCTGGCCGAGATCAACCGGGAGTTTCTGT...CCTGGAGGGTAGCTGGGCCAGACTTCTCATTTCACAGGTGAGGAGACTGGTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372298.1
ENST00000372300.5
ENST00000372302.5
ENST00000372314.3
CDS-3UTR TCA 90 bp GGCACCAGTCTCCTCACCTGTGAAATGAGAAGTCTGGCCCAGCTACCCTCCAGGGCTGGTTCCTCCAAGTaGGGGGAACACAGGCTGGAA +
Preference number: 4 (lower is better)
Translates to: GTSLLTCEMRSLAQLPSRAGSSK*GEHRLE
Trigger: TTCCAGCCTGTGTTCCCCTCACTTGGAGGAACCAGC...CCTGGAGGGTAGCTGGGCCAGACTTCTCATTTCACAGGTGAGGAGACTGGTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp AGGCCCTGCAGCCTTGTCCCTACTCCAAGGTCTTCTCAGAGTGGCCTGGGGTCCGCCTTCCTCTCTGAGTaGGGAACAGGGACACTGAAT +
Preference number: 4 (lower is better)
Translates to: RPCSLVPTPRSSQSGLGSAFLSE*GTGTLN
Trigger: ATTCAGTGTCCCTGTTCCTCACTCAGAGAGGAAGGC...GGACCCCAGGCCACTCTGAGAAGACCTTGGAGTAGGGACAAGGCTGCAGGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp CCGAGTGGCTGTGTCCTGGGTGACACCAGAGCACTGGAGCCATGGCACTGTCCATTGAAGGGCTCCCAATaGCAAGCTCCTTTCCTTCCC +
Preference number: 4 (lower is better)
Translates to: PSGCVLGDTRALEPWHCPLKGSQ*QAPFLP
Trigger: GGGAAGGAAAGGAGCTTGGCATTGGGAGCCCTTCAA...TGGACAGTGCCATGGCTCCAGTGCTCTGGTGTCACCCAGGACACAGCCACTCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp ACCAGTCTCCTCACCTGTGAAATGAGAAGTCTGGCCCAGCTACCCTCCAGGGTGTGCCTCTCAGCTGCCTaGACAGGTGTGGCCAGAGAG +
Preference number: 4 (lower is better)
Translates to: TSLLTCEMRSLAQLPSRVCLSAA*TGVARE
Trigger: CTCTCTGGCCACACCTGTGCAGGCAGCTGAGAGGCA...CACCCTGGAGGGTAGCTGGGCCAGACTTCTCATTTCACAGGTGAGGAGACTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp GAGAGATCACAGTGTGTCAAGAAGGGCAGCAAGATCGGGAGGGAGGTATGGGGTGCCTCCGAAGCCCTCTaGTGCCCCAGTAAGGGACAG +
Preference number: 4 (lower is better)
Translates to: ERSQCVKKGSKIGREVWGASEAL*CPSKGQ
Trigger: CTGTCCCTTACTGGGGCAGCAGAGGGCTTCGGAGGC...ACCCCATACCTCCCTCCCGATCTTGCTGCCCTTCTTGACACACTGTGATCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp TCAGAGTGGCCTGGGGTCCTCGTCAGAGCCAGGTCAGTGAGCCTGAACTTGGCTCAGAGGCCTGGTCTTTaGCCTAAGCCTGATGCTGAC +
Preference number: 4 (lower is better)
Translates to: SEWPGVLVRARSVSLNLAQRPGL*PKPDAD
Trigger: GTCAGCATCAGGCTTAGGGCAAAGACCAGGCCTCTG...AGCCAAGTTCAGGCTCACTGACCTGGCTCTGACGAGGACCCCAGGCCACTCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp CCGAGTGGCTGTGTCCTGGGTGACACCAGAGCACTGGAGCCATGGCACTGTCCAGTGTTGCAAAGGCTCTaGCAAGACTCTCACCCAGTC +
Preference number: 4 (lower is better)
Translates to: PSGCVLGDTRALEPWHCPVLQRL*QDSHPV
Trigger: GACTGGGTGAGAGTCTTGGCAGAGCCTTTGCAACAC...TGGACAGTGCCATGGCTCCAGTGCTCTGGTGTCACCCAGGACACAGCCACTCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp GGACCCAAGGCTCAGGATTCCCCGACCCAGAGCCCCTTTAAGGCAGATAATTTGGGGGGCCAACTGGCTTaGGGCTGCTCTCGTTGGCTT +
Preference number: 4 (lower is better)
Translates to: GPKAQDSPTQSPFKADNLGGQLA*GCSRWL
Trigger: AAGCCAACGAGAGCAGCCCCAAGCCAGTTGGCCCCC...CAAATTATCTGCCTTAAAGGGGCTCTGGGTCGGGGAATCCTGAGCCTTGGGTCC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp TGGCACTGTCCAAGGAAACCCGAAAGAGGCCCTGCAGCCTTGTCCCTACTCCAAGAGGTGTGGAATGAGTaGGGATCAGCTGGGGCAGCG +
Preference number: 4 (lower is better)
Translates to: WHCPRKPERGPAALSLLQEVWNE*GSAGAA
Trigger: CGCTGCCCCAGCTGATCCCCACTCATTCCACACCTC...TTGGAGTAGGGACAAGGCTGCAGGGCCTCTTTCGGGTTTCCTTGGACAGTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp CAGGCCTCACTTCTGCCTCCGAAGCCCTCTGCTGCCCCAGTAAGGGACAGTAGGCTGGAGGGTTCCTTCTaGTACCTTCTTGAAGGGCTC +
Preference number: 4 (lower is better)
Translates to: QASLLPPKPSAAPVRDSRLEGSF*YLLEGL
Trigger: GAGCCCTTCAAGAAGGTACCAGAAGGAACCCTCCAG...CCTACTGTCCCTTACTGGGGCAGCAGAGGGCTTCGGAGGCAGAAGTGAGGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp TCAGAGTGGCCTGGGGTCCTCGTCAGAGCCAGGTCAGTGAGCCTGAACTTGGCTGCTGACTTGAAGGCATaGGAGAGGGCGAATCCTGGA +
Preference number: 4 (lower is better)
Translates to: SEWPGVLVRARSVSLNLAADLKA*ERANPG
Trigger: TCCAGGATTCGCCCTCTCCCATGCCTTCAAGTCAGC...AGCCAAGTTCAGGCTCACTGACCTGGCTCTGACGAGGACCCCAGGCCACTCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp GAGAGATCACAGTGTGTCAAGAAGGGCAGCAAGATCGGGAGGGAGGTATGGGGTCTTGGAACCTGTTGCTaGGCTCGCCCGACATGGCGA +
Preference number: 4 (lower is better)
Translates to: ERSQCVKKGSKIGREVWGLGTCC*ARPTWR
Trigger: TCGCCATGTCGGGCGAGCTCAGCAACAGGTTCCAAG...ACCCCATACCTCCCTCCCGATCTTGCTGCCCTTCTTGACACACTGTGATCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp AACCCGAAAGAGGCCCTGCAGCCTTGTCCCTACTCCAAGGTCTTCTCAGAGTGGGCTGGTTCCTCCAAGTaGGGGGAACACAGGCTGGAA +
Preference number: 4 (lower is better)
Translates to: NPKEALQPCPYSKVFSEWAGSSK*GEHRLE
Trigger: TTCCAGCCTGTGTTCCCCTCACTTGGAGGAACCAGC...CCACTCTGAGAAGACCTTGGAGTAGGGACAAGGCTGCAGGGCCTCTTTCGGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp GCTGACTTGAAGGCATGGGAGAGGGCGAATCCTGGACCAGGGTCTTCAGAGCAAGCTGGTTCCTCCAAGTaGGGGGAACACAGGCTGGAA +
Preference number: 4 (lower is better)
Translates to: ADLKAWERANPGPGSSEQAGSSK*GEHRLE
Trigger: TTCCAGCCTGTGTTCCCCTCACTTGGAGGAACCAGC...TTGCTCTGAAGACCCTGGTCCAGGATTCGCCCTCTCCCATGCCTTCAAGTCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp CACCTCCCTCTGGAGATAAGCCTGACCTTGGGCAAGGCACTTAATCCCTGTGGGGGAACAGCACTGAGCTaGCCTTTCCCCCAAAACCCC +
Preference number: 4 (lower is better)
Translates to: HLPLEISLTLGKALNPCGGTALS*PFPQNP
Trigger: GGGGTTTTGGGGGAAAGGTCAGCTCAGTGCTGTTCC...CCCACAGGGATTAAGTGCCTTGCCCAAGGTCAGGCTTATCTCCAGAGGGAGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp TGGCACTGTCCAAGGAAACCCGAAAGAGGCCCTGCAGCCTTGTCCCTACTCCAAGGAACAGCACTGAGCTaGCCTTTCCCCCAAAACCCC +
Preference number: 4 (lower is better)
Translates to: WHCPRKPERGPAALSLLQGTALS*PFPQNP
Trigger: GGGGTTTTGGGGGAAAGGTCAGCTCAGTGCTGTTCC...TTGGAGTAGGGACAAGGCTGCAGGGCCTCTTTCGGGTTTCCTTGGACAGTGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp GAGAGAGAGATCACAGTGTGTCAAGAAGGGCAGCAAGATCGGGAGGGAGGTATGTGTAGGCAGGGTCCCTaGACATCTGGGCCCCAGTCC +
Preference number: 4 (lower is better)
Translates to: EREITVCQEGQQDREGGMCRQGP*TSGPQS
Trigger: GGACTGGGGCCCAGATGTTCAGGGACCCTGCCTACA...CATACCTCCCTCCCGATCTTGCTGCCCTTCTTGACACACTGTGATCTCTCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp TCACAGTGTGTCAAGAAGGGCAGCAAGATCGGGAGGGAGGTATGGGGTGGGAAGAGCCCACACTGGAAATaGGGTGTAGGCAGGGTCCCT +
Preference number: 4 (lower is better)
Translates to: SQCVKKGSKIGREVWGGKSPHWK*GVGRVP
Trigger: AGGGACCCTGCCTACACCTCATTTCCAGTGTGGGCT...CTTCCCACCCCATACCTCCCTCCCGATCTTGCTGCCCTTCTTGACACACTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp TCACAGTGTGTCAAGAAGGGCAGCAAGATCGGGAGGGAGGTATGGGGTGGGAAGAGCCTGATGCTGACTTaGAGGCATGGGAGAGGGCGA +
Preference number: 4 (lower is better)
Translates to: SQCVKKGSKIGREVWGGKSLMLT*RHGRGR
Trigger: TCGCCCTCTCCCATGCCTTCAAGTCAGCATCAGGCT...CTTCCCACCCCATACCTCCCTCCCGATCTTGCTGCCCTTCTTGACACACTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp TCAGAGTGGCCTGGGGTCCTCGTCAGAGCCAGGTCAGTGAGCCTGAACTTGGCTGGCAGTGAGGAGGGGTaGGGACATCTAATGATCTTG +
Preference number: 4 (lower is better)
Translates to: SEWPGVLVRARSVSLNLAGSEEG*GHLMIL
Trigger: CAAGATCATTAGATGTCCTCACCCCTCCTCACTGCC...AGCCAAGTTCAGGCTCACTGACCTGGCTCTGACGAGGACCCCAGGCCACTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp GGACCCAAGGCTCAGGATTCCCCGACCCAGAGCCCCTTTAAGGCAGATAATTTGCTAGGCCCCCAGGACTaGAGGGAAGTCACCCCATAC +
Preference number: 4 (lower is better)
Translates to: GPKAQDSPTQSPFKADNLLGPQD*REVTPY
Trigger: GTATGGGGTGACTTCCCTGCAGTCCTGGGGGCCTAG...CAAATTATCTGCCTTAAAGGGGCTCTGGGTCGGGGAATCCTGAGCCTTGGGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp CACCTCCCTCTGGAGATAAGCCTGACCTTGGGCAAGGCACTTAATCCCTGTGGGAGCTGGGGCCACACCTaGTTGCTCTCCTCCCTTAAG +
Preference number: 4 (lower is better)
Translates to: HLPLEISLTLGKALNPCGSWGHT*LLSSLK
Trigger: CTTAAGGGAGGAGAGCAAGCAGGTGTGGCCCCAGCT...CCCACAGGGATTAAGTGCCTTGCCCAAGGTCAGGCTTATCTCCAGAGGGAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp AAACCCCAGGCCTCACTTCTGCCTCCGAAGCCCTCTGCTGCCCCAGTAAGGGACGAAAACCCTCTCTTCTaGCATTTCCAGAAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: KPQASLLPPKPSAAPVRDENPLF*HFQKLG
Trigger: CCCCAGCTTCTGGAAATGGCAGAAGAGAGGGTTTTC...GTCCCTTACTGGGGCAGCAGAGGGCTTCGGAGGCAGAAGTGAGGCCTGGGGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp GCTGACTTGAAGGCATGGGAGAGGGCGAATCCTGGACCAGGGTCTTCAGAGCAAGCCAGAGAGCAGGACTaGAGGGTTCCTTCTGGTACC +
Preference number: 4 (lower is better)
Translates to: ADLKAWERANPGPGSSEQAREQD*RVPSGT
Trigger: GGTACCAGAAGGAACCCTCCAGTCCTGCTCTCTGGC...TTGCTCTGAAGACCCTGGTCCAGGATTCGCCCTCTCCCATGCCTTCAAGTCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp TGGGAGAGGGCGAATCCTGGACCAGGGTCTTCAGAGCAAGTGAAACCCTCTCCAGCAGGGAACCCACGTTaGCTCCAACCACCAAGACCT +
Preference number: 4 (lower is better)
Translates to: WERANPGPGSSEQVKPSPAGNPR*LQPPRP
Trigger: AGGTCTTGGTGGTTGGAGCCAACGTGGGTTCCCTGC...TGGAGAGGGTTTCACTTGCTCTGAAGACCCTGGTCCAGGATTCGCCCTCTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp CAGGCCTCACTTCTGCCTCCGAAGCCCTCTGCTGCCCCAGTAAGGGACAGTAGGGGACAAAGCCATACTTaGCAGTCCTCACGTTACTGG +
Preference number: 4 (lower is better)
Translates to: QASLLPPKPSAAPVRDSRGQSHT*QSSRYW
Trigger: CCAGTAACGTGAGGACTGCCAAGTATGGCTTTGTCC...CCTACTGTCCCTTACTGGGGCAGCAGAGGGCTTCGGAGGCAGAAGTGAGGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR CAA 72 bp CACTGTCCAAGGAAACCCGAAAGAGGCCCTGCAGCCTaGTCCCTACTCCAAGGTCTTCTCAGAGTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: HCPRKPERGPAA*SLLQGLLRVAW
Trigger: CCAGGCCACTCTGAGAAGACCTTGGAGTAGGGACAAGGCTGCAGGGCCTCTTTCGGGTTTCCTTGGACAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp TCAGAGTGGCCTGGGGTCCTCGTCAGAGCCAGGTCAGTGAGCCTGAACTTGGCTCCCTCCTGTCACCTCTaGGATCATCTTCTTCATCTC +
Preference number: 4 (lower is better)
Translates to: SEWPGVLVRARSVSLNLAPSCHL*DHLLHL
Trigger: GAGATGAAGAAGATGATCTCAGAGGTGACAGGAGGG...AGCCAAGTTCAGGCTCACTGACCTGGCTCTGACGAGGACCCCAGGCCACTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp GAGCCATGGCACTGTCCAAGGAAACCCGAAAGAGGCCCTGCAGCCTTGTCCCTAAAGGTGGAACAGCACTaGGCTGACCTTTCCCCCAAA +
Preference number: 4 (lower is better)
Translates to: EPWHCPRKPERGPAALSLKVEQH*ADLSPK
Trigger: TTTGGGGGAAAGGTCAGCTCAGTGCTGTTCCACCTT...TAGGGACAAGGCTGCAGGGCCTCTTTCGGGTTTCCTTGGACAGTGCCATGGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp TGGGGCACCAGTCTCCTCACCTGTGAAATGAGAAGTCTGGCCCAGCTACCCTCCCAGTCTCCTCACCTGTaGAATGAGAAGTCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: WGTSLLTCEMRSLAQLPSQSPHL*NEKSGP
Trigger: TGGGCCAGACTTCTCATTTCACAGGTGAGGAGACTG...GGAGGGTAGCTGGGCCAGACTTCTCATTTCACAGGTGAGGAGACTGGTGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000247291.8
ENST00000372298.1
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp CATGGCACTGTCCAAGGAAACCCGAAAGAGGCCCTGCAGCCTTGTCCCTACTCCACCCTCTCCAAGTGTTaGCCTTGGAGGCTGTCTCTT +
Preference number: 4 (lower is better)
Translates to: HGTVQGNPKEALQPCPYSTLSKC*PWRLSL
Trigger: AAGAGACAGCCTCCAAGGTCAACACTTGGAGAGGGT...GGAGTAGGGACAAGGCTGCAGGGCCTCTTTCGGGTTTCCTTGGACAGTGCCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp GAGAGATCACAGTGTGTCAAGAAGGGCAGCAAGATCGGGAGGGAGGTATGGGGTAGCCTGATGCTGACTTaGAGGCATGGGAGAGGGCGA +
Preference number: 4 (lower is better)
Translates to: ERSQCVKKGSKIGREVWGSLMLT*RHGRGR
Trigger: TCGCCCTCTCCCATGCCTTCAAGTCAGCATCAGGCT...ACCCCATACCTCCCTCCCGATCTTGCTGCCCTTCTTGACACACTGTGATCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp CATGGCACTGTCCAAGGAAACCCGAAAGAGGCCCTGCAGCCTTGTCCCTACTCCATCTGCTATCAGAGGTaGCTAAGGAGCCGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: HGTVQGNPKEALQPCPYSICYQR*LRSRRE
Trigger: TTCCCTGCGGCTCCTTAGTCACCTCTGATAGCAGAT...GGAGTAGGGACAAGGCTGCAGGGCCTCTTTCGGGTTTCCTTGGACAGTGCCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp CCACCAAGACCTCCCAGTCCTGTCCACTTAAGGTGTTGCAAAGGCTCTGCCAAGTCCAGGGACAACTCTTaGGACCCTCTCCTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: PPRPPSPVHLRCCKGSAKSRDNS*DPLLPG
Trigger: TCCTGGGAGGAGAGGGTCTCAAGAGTTGTCCCTGGA...CTTGGCAGAGCCTTTGCAACACCTTAAGTGGACAGGACTGGGAGGTCTTGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp CAGGCCTCACTTCTGCCTCCGAAGCCCTCTGCTGCCCCAGTAAGGGACAGTAGGCAGAAAGAAGATGGTTaGAGTCCCAAGAAGCTGAGC +
Preference number: 4 (lower is better)
Translates to: QASLLPPKPSAAPVRDSRQKEDG*SPKKLS
Trigger: GCTCAGCTTCTTGGGACTTCAACCATCTTCTTTCTG...CCTACTGTCCCTTACTGGGGCAGCAGAGGGCTTCGGAGGCAGAAGTGAGGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp GGCACCAGTCTCCTCACCTGTGAAATGAGAAGTCTGGCCCAGCTACCCTCCAGGCGACAAACCCTCCTCTaGGTCATAGGGACAAAGCCA +
Preference number: 4 (lower is better)
Translates to: GTSLLTCEMRSLAQLPSRRQTLL*VIGTKP
Trigger: TGGCTTTGTCCCTATGACTCAGAGGAGGGTTTGTCG...CCTGGAGGGTAGCTGGGCCAGACTTCTCATTTCACAGGTGAGGAGACTGGTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp TCCTGTCCACTTAAGGTGTTGCAAAGGCTCTGCCAAGACTCTCACCCAGTCTTGGCCTCCGAAGCCCTCTaGTGCCCCAGTAAGGGACAG +
Preference number: 4 (lower is better)
Translates to: SCPLKVLQRLCQDSHPVLASEAL*CPSKGQ
Trigger: CTGTCCCTTACTGGGGCAGCAGAGGGCTTCGGAGGC...CAAGACTGGGTGAGAGTCTTGGCAGAGCCTTTGCAACACCTTAAGTGGACAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp GAGCCATGGCACTGTCCAAGGAAACCCGAAAGAGGCCCTGCAGCCTTGTCCCTAGTGTTGCAAAGGCTCTaGCAAGACTCTCACCCAGTC +
Preference number: 4 (lower is better)
Translates to: EPWHCPRKPERGPAALSLVLQRL*QDSHPV
Trigger: GACTGGGTGAGAGTCTTGGCAGAGCCTTTGCAACAC...TAGGGACAAGGCTGCAGGGCCTCTTTCGGGTTTCCTTGGACAGTGCCATGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp AGAGAGAGATCACAGTGTGTCAAGAAGGGCAGCAAGATCGGGAGGGAGGTATGGCCTTGGAGGCAGATCTaGACTGGCCACCCTGTGGGT +
Preference number: 4 (lower is better)
Translates to: RERSQCVKKGSKIGREVWPWRQI*TGHPVG
Trigger: ACCCACAGGGTGGCCAGTGCAGATCTGCCTCCAAGG...CCATACCTCCCTCCCGATCTTGCTGCCCTTCTTGACACACTGTGATCTCTCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372301.2
CDS-3UTR CCA 90 bp AGATTGGGGTCAGACAAGCAACCTTGTATTTCTCAGTCTTGGCTTACCAGTGCTGGAGGCACAGGCGCCTaGTCCGGGCTCCGGCTAGCT +
Preference number: 4 (lower is better)
Translates to: RLGSDKQPCISQSWLTSAGGTGA*SGLRLA
Trigger: AGCTAGCCGGAGCCCGGACCAGGCGCCTGTGCCTCC...AGCACTGGTAAGCCAAGACTGAGAAATACAAGGTTGCTTGTCTGACCCCAATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000247291.8
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp TGGCACTGTCCAAGGAAACCCGAAAGAGGCCCTGCAGCCTTGTCCCTACTCCAAGCTGACTTGAAGGCATaGGAGAGGGCGAATCCTGGA +
Preference number: 4 (lower is better)
Translates to: WHCPRKPERGPAALSLLQADLKA*ERANPG
Trigger: TCCAGGATTCGCCCTCTCCCATGCCTTCAAGTCAGC...TTGGAGTAGGGACAAGGCTGCAGGGCCTCTTTCGGGTTTCCTTGGACAGTGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp GAGAGAGAGATCACAGTGTGTCAAGAAGGGCAGCAAGATCGGGAGGGAGGTATGCTTCCTGTCGCCCCTTaGAGGCAGATCTGCACTGGC +
Preference number: 4 (lower is better)
Translates to: EREITVCQEGQQDREGGMLPVAP*RQICTG
Trigger: GCCAGTGCAGATCTGCCTCCAAGGGGCGACAGGAAG...CATACCTCCCTCCCGATCTTGCTGCCCTTCTTGACACACTGTGATCTCTCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372301.2
CDS-3UTR TCA 90 bp AGAGAGAGATCACAGTGTGTCAAGAAGGGCAGCAAGATCGGGAGGGAGGTATGGAGAAGAGGTGTGGAATaGGTGGGGATCAGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: RERSQCVKKGSKIGREVWRRGVE*VGISWG
Trigger: GCCCCAGCTGATCCCCACTCATTCCACACCTCTTCT...CCATACCTCCCTCCCGATCTTGCTGCCCTTCTTGACACACTGTGATCTCTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp TGGCACTGTCCAAGGAAACCCGAAAGAGGCCCTGCAGCCTTGTCCCTACTCCAACTTCTGGTACCTTCTTaGAGGGCTCCCAATGCCAAG +
Preference number: 4 (lower is better)
Translates to: WHCPRKPERGPAALSLLQLLVPS*RAPNAK
Trigger: CTTGGCATTGGGAGCCCTTCAAGAAGGTACCAGAAG...TTGGAGTAGGGACAAGGCTGCAGGGCCTCTTTCGGGTTTCCTTGGACAGTGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp AGAGAGAGATCACAGTGTGTCAAGAAGGGCAGCAAGATCGGGAGGGAGGTATGGGGAACAGCACTGAGCTaGCCTTTCCCCCAAAACCCC +
Preference number: 4 (lower is better)
Translates to: RERSQCVKKGSKIGREVWGTALS*PFPQNP
Trigger: GGGGTTTTGGGGGAAAGGTCAGCTCAGTGCTGTTCC...CCATACCTCCCTCCCGATCTTGCTGCCCTTCTTGACACACTGTGATCTCTCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp CCCAGTCCAGGGCACCTCCCTCTGGAGATAAGCCTGACCTTGGGCAAGGCACTTCTGCTGACTTTGCCGTaGGCATTTTACTCCTCATTC +
Preference number: 4 (lower is better)
Translates to: PSPGHLPLEISLTLGKALLLTLP*AFYSSF
Trigger: GAATGAGGAGTAAAATGCTCACGGCAAAGTCAGCAG...AAGTGCCTTGCCCAAGGTCAGGCTTATCTCCAGAGGGAGGTGCCCTGGACTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000247291.8
ENST00000372298.1
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp GTGGCTGTGTCCTGGGTGACACCAGAGCACTGGAGCCATGGCACTGTCCAAGGAAGATCTGGGGAGAGATaGGTTAGACCGTGTATACTG +
Preference number: 4 (lower is better)
Translates to: VAVSWVTPEHWSHGTVQGRSGER*VRPCIL
Trigger: CAGTATACACGGTCTAACTCATCTCTCCCCAGATCT...TCCTTGGACAGTGCCATGGCTCCAGTGCTCTGGTGTCACCCAGGACACAGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp ACCAGTCTCCTCACCTGTGAAATGAGAAGTCTGGCCCAGCTACCCTCCAGGGTGCAGTCTCCTCACCTGTaGAATGAGAAGTCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: TSLLTCEMRSLAQLPSRVQSPHL*NEKSGP
Trigger: TGGGCCAGACTTCTCATTTCACAGGTGAGGAGACTG...CACCCTGGAGGGTAGCTGGGCCAGACTTCTCATTTCACAGGTGAGGAGACTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000247291.8
ENST00000372298.1
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp CTCAGTAACCTCCCTAAAAGGTGGAACAGCACTGAGCTGACCTTTCCCCCAAAATGTAGGCAGGGTCCCTaGACATCTGGGCCCCAGTCC +
Preference number: 4 (lower is better)
Translates to: LSNLPKRWNSTELTFPPKCRQGP*TSGPQS
Trigger: GGACTGGGGCCCAGATGTTCAGGGACCCTGCCTACA...TTTTGGGGGAAAGGTCAGCTCAGTGCTGTTCCACCTTTTAGGGAGGTTACTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp AACCCGAAAGAGGCCCTGCAGCCTTGTCCCTACTCCAAGGTCTTCTCAGAGTGGATCTGCTATCAGAGGTaGCTAAGGAGCCGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: NPKEALQPCPYSKVFSEWICYQR*LRSRRE
Trigger: TTCCCTGCGGCTCCTTAGTCACCTCTGATAGCAGAT...CCACTCTGAGAAGACCTTGGAGTAGGGACAAGGCTGCAGGGCCTCTTTCGGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp CACCTCCCTCTGGAGATAAGCCTGACCTTGGGCAAGGCACTTAATCCCTGTGGGCCAAGAGCCACAACCTaGAATAGATGCAGACTGCCC +
Preference number: 4 (lower is better)
Translates to: HLPLEISLTLGKALNPCGPRATT*NRCRLP
Trigger: GGGCAGTCTGCATCTATTTCAGGTTGTGGCTCTTGG...CCCACAGGGATTAAGTGCCTTGCCCAAGGTCAGGCTTATCTCCAGAGGGAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp GGGAGAGATGAGTTAGACCGTGTATACTGCACATGCCAGGACAACATGGGAGGATGCCTCTCAGCTGCCTaGACAGGTGTGGCCAGAGAG +
Preference number: 4 (lower is better)
Translates to: GRDELDRVYCTCQDNMGGCLSAA*TGVARE
Trigger: CTCTCTGGCCACACCTGTGCAGGCAGCTGAGAGGCA...TCCTCCCATGTTGTCCTGGCATGTGCAGTATACACGGTCTAACTCATCTCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp GGCACCAGTCTCCTCACCTGTGAAATGAGAAGTCTGGCCCAGCTACCCTCCAGGCGTGTATACTGCACATaGCAGGACAACATGGGAGGA +
Preference number: 4 (lower is better)
Translates to: GTSLLTCEMRSLAQLPSRRVYCT*QDNMGG
Trigger: TCCTCCCATGTTGTCCTGGCATGTGCAGTATACACG...CCTGGAGGGTAGCTGGGCCAGACTTCTCATTTCACAGGTGAGGAGACTGGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000247291.8
ENST00000372298.1
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp GAGAGATCACAGTGTGTCAAGAAGGGCAGCAAGATCGGGAGGGAGGTATGGGGTCAGAGGCCTGGTCTTTaGCCTAAGCCTGATGCTGAC +
Preference number: 4 (lower is better)
Translates to: ERSQCVKKGSKIGREVWGQRPGL*PKPDAD
Trigger: GTCAGCATCAGGCTTAGGGCAAAGACCAGGCCTCTG...ACCCCATACCTCCCTCCCGATCTTGCTGCCCTTCTTGACACACTGTGATCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp CCCAGTCCAGGGCACCTCCCTCTGGAGATAAGCCTGACCTTGGGCAAGGCACTTGTCCACTTAAGGTGTTaGAAAGGCTCTGCCAAGACT +
Preference number: 4 (lower is better)
Translates to: PSPGHLPLEISLTLGKALVHLRC*KGSAKT
Trigger: AGTCTTGGCAGAGCCTTTGCAACACCTTAAGTGGAC...AAGTGCCTTGCCCAAGGTCAGGCTTATCTCCAGAGGGAGGTGCCCTGGACTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp AAGGTTCTGAGAGATCTGGGGAGAGATGAGTTAGACCGTGTATACTGCACATGCGAGGGGAACACAGGCTaGAAGCCTCCCTGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: KVLRDLGRDELDRVYCTCEGNTG*KPPCPG
Trigger: GCCAGGGCAGGGAGGCTTCCAGCCTGTGTTCCCCTC...GCATGTGCAGTATACACGGTCTAACTCATCTCTCCCCAGATCTCTCAGAACCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp GCAGATTGGGGTCAGACAAGCAACCTTGTATTTCTCAGTCTTGGCTTACCAGTGGAGGGGAACACAGGCTaGAAGCCTCCCTGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: ADWGQTSNLVFLSLGLPVEGNTG*KPPCPG
Trigger: GCCAGGGCAGGGAGGCTTCCAGCCTGTGTTCCCCTC...CACTGGTAAGCCAAGACTGAGAAATACAAGGTTGCTTGTCTGACCCCAATCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp GGGAGAGATGAGTTAGACCGTGTATACTGCACATGCCAGGACAACATGGGAGGAGAGGTGTGGAATGAGTaGGGATCAGCTGGGGCAGCG +
Preference number: 4 (lower is better)
Translates to: GRDELDRVYCTCQDNMGGEVWNE*GSAGAA
Trigger: CGCTGCCCCAGCTGATCCCCACTCATTCCACACCTC...TCCTCCCATGTTGTCCTGGCATGTGCAGTATACACGGTCTAACTCATCTCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp CAGGCCTCACTTCTGCCTCCGAAGCCCTCTGCTGCCCCAGTAAGGGACAGTAGGTGTATTTCTCAGTCTTaGCTTACCAGTGCTGCTGAC +
Preference number: 4 (lower is better)
Translates to: QASLLPPKPSAAPVRDSRCISQS*LTSAAD
Trigger: GTCAGCAGCACTGGTAAGCCAAGACTGAGAAATACA...CCTACTGTCCCTTACTGGGGCAGCAGAGGGCTTCGGAGGCAGAAGTGAGGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp AGAGAGAGATCACAGTGTGTCAAGAAGGGCAGCAAGATCGGGAGGGAGGTATGGGCAGGGAACCCACGTTaGCTCCAACCACCAAGACCT +
Preference number: 4 (lower is better)
Translates to: RERSQCVKKGSKIGREVWAGNPR*LQPPRP
Trigger: AGGTCTTGGTGGTTGGAGCCAACGTGGGTTCCCTGC...CCATACCTCCCTCCCGATCTTGCTGCCCTTCTTGACACACTGTGATCTCTCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp TGGGGCACCAGTCTCCTCACCTGTGAAATGAGAAGTCTGGCCCAGCTACCCTCCGGACAAAGCCATACTTaGCAGTCCTCACGTTACTGG +
Preference number: 4 (lower is better)
Translates to: WGTSLLTCEMRSLAQLPSGQSHT*QSSRYW
Trigger: CCAGTAACGTGAGGACTGCCAAGTATGGCTTTGTCC...GGAGGGTAGCTGGGCCAGACTTCTCATTTCACAGGTGAGGAGACTGGTGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp ATCAGCCAGTCATGGCCAAATAACCTCATTCCTGAACTGGTTGAAACCAGTGGGTCTCCTGCCGGGCTTTaGGCAAGCCGAACGCCTTCC +
Preference number: 4 (lower is better)
Translates to: ISQSWPNNLIPELVETSGSPAGL*ASRTPS
Trigger: GGAAGGCGTTCGGCTTGCTCAAAGCCCGGCAGGAGA...CCCACTGGTTTCAACCAGTTCAGGAATGAGGTTATTTGGCCATGACTGGCTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp ATGAGAGAAGCAGAGTCAGGTTTCAAGCAGATTGGGGTCAGACAAGCAACCTTGTCTCCTGCCGGGCTTTaGGCAAGCCGAACGCCTTCC +
Preference number: 4 (lower is better)
Translates to: MREAESGFKQIGVRQATLSPAGL*ASRTPS
Trigger: GGAAGGCGTTCGGCTTGCTCAAAGCCCGGCAGGAGA...CAAGGTTGCTTGTCTGACCCCAATCTGCTTGAAACCTGACTCTGCTTCTCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000247291.8
ENST00000372298.1
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp CACCTCCCTCTGGAGATAAGCCTGACCTTGGGCAAGGCACTTAATCCCTGTGGGCCCTCCTGTCACCTCTaGGATCATCTTCTTCATCTC +
Preference number: 4 (lower is better)
Translates to: HLPLEISLTLGKALNPCGPSCHL*DHLLHL
Trigger: GAGATGAAGAAGATGATCTCAGAGGTGACAGGAGGG...CCCACAGGGATTAAGTGCCTTGCCCAAGGTCAGGCTTATCTCCAGAGGGAGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp AACCCGAAAGAGGCCCTGCAGCCTTGTCCCTACTCCAAGGTCTTCTCAGAGTGGGCTTACCAGTGCTGCTaGCTTTGCCGTGAGCATTTT +
Preference number: 4 (lower is better)
Translates to: NPKEALQPCPYSKVFSEWAYQCC*LCREHF
Trigger: AAAATGCTCACGGCAAAGTCAGCAGCACTGGTAAGC...CCACTCTGAGAAGACCTTGGAGTAGGGACAAGGCTGCAGGGCCTCTTTCGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp CCAGGGCACCTCCCTCTGGAGATAAGCCTGACCTTGGGCAAGGCACTTAATCCCTTTGAAGCAGATCCTTaGGCTCAAGATCAGCCAGTC +
Preference number: 4 (lower is better)
Translates to: PGHLPLEISLTLGKALNPFEADP*AQDQPV
Trigger: GACTGGCTGATCTTGAGCTCAAGGATCTGCTTCAAA...GGGATTAAGTGCCTTGCCCAAGGTCAGGCTTATCTCCAGAGGGAGGTGCCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp GCCAGAGAGCAGGACTGGAGGGTTCCTTCTGGTACCTTCTTGAAGGGCTCCCAAAGGCCTGTGTGCATTTaGAGCAGATCCTTGAGCTCA +
Preference number: 4 (lower is better)
Translates to: AREQDWRVPSGTFLKGSQRPVCI*SRSLSS
Trigger: TGAGCTCAAGGATCTGCTTCAAATGCACACAGGCCT...TTGGGAGCCCTTCAAGAAGGTACCAGAAGGAACCCTCCAGTCCTGCTCTCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp ACCAGTGCTGCTGACTTTGCCGTGAGCATTTTACTCCTCATTCTCCCATCCTGGTCCAGGGACAACTCTTaGGACCCTCTCCTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: TSAADFAVSILLLILPSWSRDNS*DPLLPG
Trigger: TCCTGGGAGGAGAGGGTCTCAAGAGTTGTCCCTGGA...CCAGGATGGGAGAATGAGGAGTAAAATGCTCACGGCAAAGTCAGCAGCACTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp CTCATTCCTGAACTGGTTGAAACCAGTGGGTTAACCCAACCTGGCCATTTCCTCCTGCACAGTACCGGTTaGTCTCGGCCAGCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: LIPELVETSGLTQPGHFLLHSTG*SRPASS
Trigger: AGAGGAGGCTGGCCGAGATCAACCGGTACTGTGCAG...GAGGAAATGGCCAGGTTGGGTTAACCCACTGGTTTCAACCAGTTCAGGAATGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372309.7
CDS-3UTR TCA 90 bp ACCAGTCTCCTCACCTGTGAAATGAGAAGTCTGGCCCAGCTACCCTCCAGGGTGTCACACAGAAACTCCTaGAACAGCAGAGCCAGCAAG +
Preference number: 4 (lower is better)
Translates to: TSLLTCEMRSLAQLPSRVSHRNS*NSRASK
Trigger: CTTGCTGGCTCTGCTGTTTCAGGAGTTTCTGTGTGA...CACCCTGGAGGGTAGCTGGGCCAGACTTCTCATTTCACAGGTGAGGAGACTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372309.7
CDS-3UTR GCA 90 bp TCTTCAGAGCAAGTGAAACCCTCTCCAAGTGTTGACCTTGGAGGCTGTCTCTTCTGCCTCTCAGCTGCCTaGACAGGTGTGGCCAGAGAG +
Preference number: 4 (lower is better)
Translates to: SSEQVKPSPSVDLGGCLFCLSAA*TGVARE
Trigger: CTCTCTGGCCACACCTGTGCAGGCAGCTGAGAGGCA...GAAGAGACAGCCTCCAAGGTCAACACTTGGAGAGGGTTTCACTTGCTCTGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp GACTGCAGGGAAGTCACCCCATACCTCCCCCTTCCTAACATTTATCTCATTGTCTGCCTCTCAGCTGCCTaGACAGGTGTGGCCAGAGAG +
Preference number: 4 (lower is better)
Translates to: DCREVTPYLPLPNIYLIVCLSAA*TGVARE
Trigger: CTCTCTGGCCACACCTGTGCAGGCAGCTGAGAGGCA...GACAATGAGATAAATGTTAGGAAGGGGGAGGTATGGGGTGACTTCCCTGCAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp GACTGCAGGGAAGTCACCCCATACCTCCCCCTTCCTAACATTTATCTCATTGTCAGTAGGGCTGCACGCTaGCTCTCAGCTGCCTGCACA +
Preference number: 4 (lower is better)
Translates to: DCREVTPYLPLPNIYLIVSRAAR*LSAACT
Trigger: TGTGCAGGCAGCTGAGAGGCAGCGTGCAGCCCTACT...GACAATGAGATAAATGTTAGGAAGGGGGAGGTATGGGGTGACTTCCCTGCAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp ATCAGCCAGTCATGGCCAAATAACCTCATTCCTGAACTGGTTGAAACCAGTGGGCCCAGGCCTCACTTCTaGCTCCGAAGCCCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: ISQSWPNNLIPELVETSGPRPHF*LRSPLL
Trigger: CAGCAGAGGGCTTCGGAGGCAGAAGTGAGGCCTGGG...CCCACTGGTTTCAACCAGTTCAGGAATGAGGTTATTTGGCCATGACTGGCTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp AACCCGAAAGAGGCCCTGCAGCCTTGTCCCTACTCCAAGGTCTTCTCAGAGTGGCGTGTATACTGCACATaGCAGGACAACATGGGAGGA +
Preference number: 4 (lower is better)
Translates to: NPKEALQPCPYSKVFSEWRVYCT*QDNMGG
Trigger: TCCTCCCATGTTGTCCTGGCATGTGCAGTATACACG...CCACTCTGAGAAGACCTTGGAGTAGGGACAAGGCTGCAGGGCCTCTTTCGGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp CCCAGTCCAGGGCACCTCCCTCTGGAGATAAGCCTGACCTTGGGCAAGGCACTTTTAGACCGTGTATACTaGACATGCCAGGACAACATG +
Preference number: 4 (lower is better)
Translates to: PSPGHLPLEISLTLGKALLDRVY*TCQDNM
Trigger: CATGTTGTCCTGGCATGTGCAGTATACACGGTCTAA...AAGTGCCTTGCCCAAGGTCAGGCTTATCTCCAGAGGGAGGTGCCCTGGACTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000247291.8
ENST00000372298.1
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp TGGGGCACCAGTCTCCTCACCTGTGAAATGAGAAGTCTGGCCCAGCTACCCTCCGTCCACTTAAGGTGTTaGAAAGGCTCTGCCAAGACT +
Preference number: 4 (lower is better)
Translates to: WGTSLLTCEMRSLAQLPSVHLRC*KGSAKT
Trigger: AGTCTTGGCAGAGCCTTTGCAACACCTTAAGTGGAC...GGAGGGTAGCTGGGCCAGACTTCTCATTTCACAGGTGAGGAGACTGGTGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp GCTGACTTGAAGGCATGGGAGAGGGCGAATCCTGGACCAGGGTCTTCAGAGCAACTGGCCATTTCCTCATaGCTTACCTGTTTTCCTCCC +
Preference number: 4 (lower is better)
Translates to: ADLKAWERANPGPGSSEQLAISS*LTCFPP
Trigger: GGGAGGAAAACAGGTAAGGCATGAGGAAATGGCCAG...TTGCTCTGAAGACCCTGGTCCAGGATTCGCCCTCTCCCATGCCTTCAAGTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp AGAGGCCCTGCAGCCTTGTCCCTACTCCAAGGTCTTCTCAGAGTGGCCTGGGGTGGCTGTGAGCTTTTCTaGAAGGTTCTCTTCATCACT +
Preference number: 4 (lower is better)
Translates to: RGPAALSLLQGLLRVAWGGCELF*KVLFIT
Trigger: AGTGATGAAGAGAACCTTCCAGAAAAGCTCACAGCC...ACCCCAGGCCACTCTGAGAAGACCTTGGAGTAGGGACAAGGCTGCAGGGCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp GGGAGAGATGAGTTAGACCGTGTATACTGCACATGCCAGGACAACATGGGAGGAGCCAGAGAGCAGGACTaGAGGGTTCCTTCTGGTACC +
Preference number: 4 (lower is better)
Translates to: GRDELDRVYCTCQDNMGGAREQD*RVPSGT
Trigger: GGTACCAGAAGGAACCCTCCAGTCCTGCTCTCTGGC...TCCTCCCATGTTGTCCTGGCATGTGCAGTATACACGGTCTAACTCATCTCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp CCCAGTCCAGGGCACCTCCCTCTGGAGATAAGCCTGACCTTGGGCAAGGCACTTTGTATTTCTCAGTCTTaGCTTACCAGTGCTGCTGAC +
Preference number: 4 (lower is better)
Translates to: PSPGHLPLEISLTLGKALCISQS*LTSAAD
Trigger: GTCAGCAGCACTGGTAAGCCAAGACTGAGAAATACA...AAGTGCCTTGCCCAAGGTCAGGCTTATCTCCAGAGGGAGGTGCCCTGGACTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000247291.8
ENST00000372298.1
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp CCCAGTCCAGGGCACCTCCCTCTGGAGATAAGCCTGACCTTGGGCAAGGCACTTAGGTTTCAAGCAGATTaGGGTCAGACAAGCAACCTT +
Preference number: 4 (lower is better)
Translates to: PSPGHLPLEISLTLGKALRFQAD*GQTSNL
Trigger: AAGGTTGCTTGTCTGACCCCAATCTGCTTGAAACCT...AAGTGCCTTGCCCAAGGTCAGGCTTATCTCCAGAGGGAGGTGCCCTGGACTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000247291.8
ENST00000372298.1
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp AAACCCCAGGCCTCACTTCTGCCTCCGAAGCCCTCTGCTGCCCCAGTAAGGGACCATGCCAGGACAACATaGGAGGATGTAAAGCTTATA +
Preference number: 4 (lower is better)
Translates to: KPQASLLPPKPSAAPVRDHARTT*EDVKLI
Trigger: TATAAGCTTTACATCCTCCCATGTTGTCCTGGCATG...GTCCCTTACTGGGGCAGCAGAGGGCTTCGGAGGCAGAAGTGAGGCCTGGGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp CCCTCAATGACCAAACAAATGAGAGAGAGAGAGATCACAGTGTGTCAAGAAGGGGGGTCCCTGAACATCTaGGCCCCAGTCCAGGGCACC +
Preference number: 4 (lower is better)
Translates to: PSMTKQMREREITVCQEGGSLNI*APVQGT
Trigger: GGTGCCCTGGACTGGGGCCCAGATGTTCAGGGACCC...CCCTTCTTGACACACTGTGATCTCTCTCTCTCTCATTTGTTTGGTCATTGAGGG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp AGATTGGGGTCAGACAAGCAACCTTGTATTTCTCAGTCTTGGCTTACCAGTGCTGGGTCCCTGAACATCTaGGCCCCAGTCCAGGGCACC +
Preference number: 4 (lower is better)
Translates to: RLGSDKQPCISQSWLTSAGSLNI*APVQGT
Trigger: GGTGCCCTGGACTGGGGCCCAGATGTTCAGGGACCC...AGCACTGGTAAGCCAAGACTGAGAAATACAAGGTTGCTTGTCTGACCCCAATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR CAA 72 bp ACCACCAAGACCTCCCAGTCCTGTCCACTTAAGGTGTaGCAAAGGCTCTGCCAAGACTCTCACCCAGTCTTG +
Preference number: 4 (lower is better)
Translates to: TTKTSQSCPLKV*QRLCQDSHPVL
Trigger: CAAGACTGGGTGAGAGTCTTGGCAGAGCCTTTGCAACACCTTAAGTGGACAGGACTGGGAGGTCTTGGTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp GGTTTCAAGCAGATTGGGGTCAGACAAGCAACCTTGTATTTCTCAGTCTTGGCTTCTCCTGCCGGGCTTTaGGCAAGCCGAACGCCTTCC +
Preference number: 4 (lower is better)
Translates to: GFKQIGVRQATLYFSVLASPAGL*ASRTPS
Trigger: GGAAGGCGTTCGGCTTGCTCAAAGCCCGGCAGGAGA...AGCCAAGACTGAGAAATACAAGGTTGCTTGTCTGACCCCAATCTGCTTGAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000247291.8
ENST00000372298.1
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp CTCAGTAACCTCCCTAAAAGGTGGAACAGCACTGAGCTGACCTTTCCCCCAAAAAGAAGAGGTGTGGAATaGGTGGGGATCAGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: LSNLPKRWNSTELTFPPKRRGVE*VGISWG
Trigger: GCCCCAGCTGATCCCCACTCATTCCACACCTCTTCT...TTTTGGGGGAAAGGTCAGCTCAGTGCTGTTCCACCTTTTAGGGAGGTTACTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp GAGAGAGAGATCACAGTGTGTCAAGAAGGGCAGCAAGATCGGGAGGGAGGTATGCTTCTGGTACCTTCTTaGAGGGCTCCCAATGCCAAG +
Preference number: 4 (lower is better)
Translates to: EREITVCQEGQQDREGGMLLVPS*RAPNAK
Trigger: CTTGGCATTGGGAGCCCTTCAAGAAGGTACCAGAAG...CATACCTCCCTCCCGATCTTGCTGCCCTTCTTGACACACTGTGATCTCTCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp TGGGAGAGGGCGAATCCTGGACCAGGGTCTTCAGAGCAAGTGAAACCCTCTCCAAGATCTGGGGAGAGATaGGTTAGACCGTGTATACTG +
Preference number: 4 (lower is better)
Translates to: WERANPGPGSSEQVKPSPRSGER*VRPCIL
Trigger: CAGTATACACGGTCTAACTCATCTCTCCCCAGATCT...TGGAGAGGGTTTCACTTGCTCTGAAGACCCTGGTCCAGGATTCGCCCTCTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp AGAGAGAGATCACAGTGTGTCAAGAAGGGCAGCAAGATCGGGAGGGAGGTATGGCAGTCTCCTCACCTGTaGAATGAGAAGTCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: RERSQCVKKGSKIGREVWQSPHL*NEKSGP
Trigger: TGGGCCAGACTTCTCATTTCACAGGTGAGGAGACTG...CCATACCTCCCTCCCGATCTTGCTGCCCTTCTTGACACACTGTGATCTCTCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp GCCAGAGAGCAGGACTGGAGGGTTCCTTCTGGTACCTTCTTGAAGGGCTCCCAATTTGAAGCAGATCCTTaGGCTCAAGATCAGCCAGTC +
Preference number: 4 (lower is better)
Translates to: AREQDWRVPSGTFLKGSQFEADP*AQDQPV
Trigger: GACTGGCTGATCTTGAGCTCAAGGATCTGCTTCAAA...TTGGGAGCCCTTCAAGAAGGTACCAGAAGGAACCCTCCAGTCCTGCTCTCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp GAGAGAGAGATCACAGTGTGTCAAGAAGGGCAGCAAGATCGGGAGGGAGGTATGCCCACCCCCATTCAATaGGAAAACCCTCTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: EREITVCQEGQQDREGGMPTPIQ*ENPLFC
Trigger: GCAGAAGAGAGGGTTTTCTCATTGAATGGGGGTGGG...CATACCTCCCTCCCGATCTTGCTGCCCTTCTTGACACACTGTGATCTCTCTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp TCTTCAGAGCAAGTGAAACCCTCTCCAAGTGTTGACCTTGGAGGCTGTCTCTTCTCCAGGGACAACTCTTaGGACCCTCTCCTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: SSEQVKPSPSVDLGGCLFSRDNS*DPLLPG
Trigger: TCCTGGGAGGAGAGGGTCTCAAGAGTTGTCCCTGGA...GAAGAGACAGCCTCCAAGGTCAACACTTGGAGAGGGTTTCACTTGCTCTGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp TGGCACTGTCCAAGGAAACCCGAAAGAGGCCCTGCAGCCTTGTCCCTACTCCAACAGAAAGAAGATGGTTaGAGTCCCAAGAAGCTGAGC +
Preference number: 4 (lower is better)
Translates to: WHCPRKPERGPAALSLLQQKEDG*SPKKLS
Trigger: GCTCAGCTTCTTGGGACTTCAACCATCTTCTTTCTG...TTGGAGTAGGGACAAGGCTGCAGGGCCTCTTTCGGGTTTCCTTGGACAGTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp GGCACCAGTCTCCTCACCTGTGAAATGAGAAGTCTGGCCCAGCTACCCTCCAGGTCAGTAACCTCCCTCTaGGATCATCTTCTTCATCTC +
Preference number: 4 (lower is better)
Translates to: GTSLLTCEMRSLAQLPSRSVTSL*DHLLHL
Trigger: GAGATGAAGAAGATGATCTCAGAGGGAGGTTACTGA...CCTGGAGGGTAGCTGGGCCAGACTTCTCATTTCACAGGTGAGGAGACTGGTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372298.1
CDS-3UTR GCA 90 bp AGCAGATTGGGGTCAGACAAGCAACCTTGTATTTCTCAGTCTTGGCTTACCAGTACGCTGCCTCTCAGCTaGCTGCACAGGTGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: SRLGSDKQPCISQSWLTSTLPLS*LHRCGQ
Trigger: CTGGCCACACCTGTGCAGGCAGCTGAGAGGCAGCGT...ACTGGTAAGCCAAGACTGAGAAATACAAGGTTGCTTGTCTGACCCCAATCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp AAGCAGATTGGGGTCAGACAAGCAACCTTGTATTTCTCAGTCTTGGCTTACCAGACGCTGCCTCTCAGCTaGCTGCACAGGTGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: KQIGVRQATLYFSVLAYQTLPLS*LHRCGQ
Trigger: CTGGCCACACCTGTGCAGGCAGCTGAGAGGCAGCGT...CTGGTAAGCCAAGACTGAGAAATACAAGGTTGCTTGTCTGACCCCAATCTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp ATGAGAGAAGCAGAGTCAGGTTTCAAGCAGATTGGGGTCAGACAAGCAACCTTGAGTAGGGCTGCACGCTaGCTCTCAGCTGCCTGCACA +
Preference number: 4 (lower is better)
Translates to: MREAESGFKQIGVRQATLSRAAR*LSAACT
Trigger: TGTGCAGGCAGCTGAGAGGCAGCGTGCAGCCCTACT...CAAGGTTGCTTGTCTGACCCCAATCTGCTTGAAACCTGACTCTGCTTCTCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp CTAAAATCCTGCGAGTCCATAAGAAAGGACACAGGTGACCCCAGTTCAATTCCCAGTAGGGCTGCACGCTaGCTCTCAGCTGCCTGCACA +
Preference number: 4 (lower is better)
Translates to: LKSCESIRKDTGDPSSIPSRAAR*LSAACT
Trigger: TGTGCAGGCAGCTGAGAGGCAGCGTGCAGCCCTACT...GGGAATTGAACTGGGGTCACCTGTGTCCTTTCTTATGGACTCGCAGGATTTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp AGAGATGAGTTAGACCGTGTATACTGCACATGCCAGGACAACATGGGAGGATGTAGTAGGGCTGCACGCTaGCTCTCAGCTGCCTGCACA +
Preference number: 4 (lower is better)
Translates to: RDELDRVYCTCQDNMGGCSRAAR*LSAACT
Trigger: TGTGCAGGCAGCTGAGAGGCAGCGTGCAGCCCTACT...ACATCCTCCCATGTTGTCCTGGCATGTGCAGTATACACGGTCTAACTCATCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp GCAGAGTCAGGTTTCAAGCAGATTGGGGTCAGACAAGCAACCTTGTATTTCTCAGCCTCCGAAGCCCTCTaGTGCCCCAGTAAGGGACAG +
Preference number: 4 (lower is better)
Translates to: AESGFKQIGVRQATLYFSASEAL*CPSKGQ
Trigger: CTGTCCCTTACTGGGGCAGCAGAGGGCTTCGGAGGC...TGAGAAATACAAGGTTGCTTGTCTGACCCCAATCTGCTTGAAACCTGACTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp GGTCAGACAAGCAACCTTGTATTTCTCAGTCTTGGCTTACCAGTGCTGCTGACTCTAGGCCCCCAGGACTaGAGGGAAGTCACCCCATAC +
Preference number: 4 (lower is better)
Translates to: GQTSNLVFLSLGLPVLLTLGPQD*REVTPY
Trigger: GTATGGGGTGACTTCCCTGCAGTCCTGGGGGCCTAG...AGTCAGCAGCACTGGTAAGCCAAGACTGAGAAATACAAGGTTGCTTGTCTGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp TCAGAGTGGCCTGGGGTCCTCGTCAGAGCCAGGTCAGTGAGCCTGAACTTGGCTCAGGGAGGAATGTTTTaGTGGGGTTTAAACTTCAAC +
Preference number: 4 (lower is better)
Translates to: SEWPGVLVRARSVSLNLAQGGMF*WGLNFN
Trigger: GTTGAAGTTTAAACCCCAGCAAAACATTCCTCCCTG...AGCCAAGTTCAGGCTCACTGACCTGGCTCTGACGAGGACCCCAGGCCACTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp CCTCTGAGTCATAGGGACAAAGCCATACTTGGCAGTCCTCACGTTACTGGTTACAGCTGGGGCCACACCTaGTTGCTCTCCTCCCTTAAG +
Preference number: 4 (lower is better)
Translates to: PLSHRDKAILGSPHVTGYSWGHT*LLSSLK
Trigger: CTTAAGGGAGGAGAGCAAGCAGGTGTGGCCCCAGCT...GTAACCAGTAACGTGAGGACTGCCAAGTATGGCTTTGTCCCTATGACTCAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp CAACCACCAAGACCTCCCAGTCCTGTCCACTTAAGGTGTTGCAAAGGCTCTGCCGAAAACCCTCTCTTCTaGCATTTCCAGAAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: QPPRPPSPVHLRCCKGSAENPLF*HFQKLG
Trigger: CCCCAGCTTCTGGAAATGGCAGAAGAGAGGGTTTTC...GGCAGAGCCTTTGCAACACCTTAAGTGGACAGGACTGGGAGGTCTTGGTGGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp TCTTCAGAGCAAGTGAAACCCTCTCCAAGTGTTGACCTTGGAGGCTGTCTCTTCGAAATAGATGCAGACTaGCCCCGCCCTCCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: SSEQVKPSPSVDLGGCLFEIDAD*PRPPSR
Trigger: CCTGGAAGGAGGGCGGGGGCAGTCTGCATCTATTTC...GAAGAGACAGCCTCCAAGGTCAACACTTGGAGAGGGTTTCACTTGCTCTGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp AATGTTTTGCTGGGGTTTAAACTTCAACTAGGCCTGTGTGCATTTGAAGCAGATGGAGGCACAGGCGCCTaGTCCGGGCTCCGGCTAGCT +
Preference number: 4 (lower is better)
Translates to: NVLLGFKLQLGLCAFEADGGTGA*SGLRLA
Trigger: AGCTAGCCGGAGCCCGGACCAGGCGCCTGTGCCTCC...ATCTGCTTCAAATGCACACAGGCCTAGTTGAAGTTTAAACCCCAGCAAAACATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000247291.8
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp GGCACCAGTCTCCTCACCTGTGAAATGAGAAGTCTGGCCCAGCTACCCTCCAGGGGCTGTGAGCTTTTCTaGAAGGTTCTCTTCATCACT +
Preference number: 4 (lower is better)
Translates to: GTSLLTCEMRSLAQLPSRGCELF*KVLFIT
Trigger: AGTGATGAAGAGAACCTTCCAGAAAAGCTCACAGCC...CCTGGAGGGTAGCTGGGCCAGACTTCTCATTTCACAGGTGAGGAGACTGGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000247291.8
ENST00000372298.1
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp TCCTGTCCACTTAAGGTGTTGCAAAGGCTCTGCCAAGACTCTCACCCAGTCTTGGTGACACCAGAGCACTaGAGCCATGGCACTGTCCAA +
Preference number: 4 (lower is better)
Translates to: SCPLKVLQRLCQDSHPVLVTPEH*SHGTVQ
Trigger: TTGGACAGTGCCATGGCTCCAGTGCTCTGGTGTCAC...CAAGACTGGGTGAGAGTCTTGGCAGAGCCTTTGCAACACCTTAAGTGGACAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp GCAGATTGGGGTCAGACAAGCAACCTTGTATTTCTCAGTCTTGGCTTACCAGTGGAGGTGTGGAATGAGTaGGGATCAGCTGGGGCAGCG +
Preference number: 4 (lower is better)
Translates to: ADWGQTSNLVFLSLGLPVEVWNE*GSAGAA
Trigger: CGCTGCCCCAGCTGATCCCCACTCATTCCACACCTC...CACTGGTAAGCCAAGACTGAGAAATACAAGGTTGCTTGTCTGACCCCAATCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp CATGGCACTGTCCAAGGAAACCCGAAAGAGGCCCTGCAGCCTTGTCCCTACTCCTGTATTTCTCAGTCTTaGCTTACCAGTGCTGCTGAC +
Preference number: 4 (lower is better)
Translates to: HGTVQGNPKEALQPCPYSCISQS*LTSAAD
Trigger: GTCAGCAGCACTGGTAAGCCAAGACTGAGAAATACA...GGAGTAGGGACAAGGCTGCAGGGCCTCTTTCGGGTTTCCTTGGACAGTGCCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp TGGGGCACCAGTCTCCTCACCTGTGAAATGAGAAGTCTGGCCCAGCTACCCTCCAGGTTTCAAGCAGATTaGGGTCAGACAAGCAACCTT +
Preference number: 4 (lower is better)
Translates to: WGTSLLTCEMRSLAQLPSRFQAD*GQTSNL
Trigger: AAGGTTGCTTGTCTGACCCCAATCTGCTTGAAACCT...GGAGGGTAGCTGGGCCAGACTTCTCATTTCACAGGTGAGGAGACTGGTGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000247291.8
ENST00000372298.1
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp CCAGGGCACCTCCCTCTGGAGATAAGCCTGACCTTGGGCAAGGCACTTAATCCCAGGTTTCAAGCAGATTaGGGTCAGACAAGCAACCTT +
Preference number: 4 (lower is better)
Translates to: PGHLPLEISLTLGKALNPRFQAD*GQTSNL
Trigger: AAGGTTGCTTGTCTGACCCCAATCTGCTTGAAACCT...GGGATTAAGTGCCTTGCCCAAGGTCAGGCTTATCTCCAGAGGGAGGTGCCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000247291.8
ENST00000372298.1
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp TCAGAGTGGCCTGGGGTCCTCGTCAGAGCCAGGTCAGTGAGCCTGAACTTGGCTCATGCCAGGACAACATaGGAGGATGTAAAGCTTATA +
Preference number: 4 (lower is better)
Translates to: SEWPGVLVRARSVSLNLAHARTT*EDVKLI
Trigger: TATAAGCTTTACATCCTCCCATGTTGTCCTGGCATG...AGCCAAGTTCAGGCTCACTGACCTGGCTCTGACGAGGACCCCAGGCCACTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp TCCCCGACCCAGAGCCCCTTTAAGGCAGATAATTTGTGCTTTACAAAGACATTGCTTGGAACCTGTTGCTaGGCTCGCCCGACATGGCGA +
Preference number: 4 (lower is better)
Translates to: SPTQSPFKADNLCFTKTLLGTCC*ARPTWR
Trigger: TCGCCATGTCGGGCGAGCTCAGCAACAGGTTCCAAG...CAATGTCTTTGTAAAGCACAAATTATCTGCCTTAAAGGGGCTCTGGGTCGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp GACAAGCAACCTTGTATTTCTCAGTCTTGGCTTACCAGTGCTGCTGACTTTGCCACAGAAACTCCCGGTTaGTCTCGGCCAGCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: DKQPCISQSWLTSAADFATETPG*SRPASS
Trigger: AGAGGAGGCTGGCCGAGATCAACCGGGAGTTTCTGT...GGCAAAGTCAGCAGCACTGGTAAGCCAAGACTGAGAAATACAAGGTTGCTTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372298.1
ENST00000372300.5
ENST00000372302.5
ENST00000372314.3
CDS-3UTR TCA 90 bp AAGGTTCTGAGAGATCTGGGGAGAGATGAGTTAGACCGTGTATACTGCACATGCGCTGGTTCCTCCAAGTaGGGGGAACACAGGCTGGAA +
Preference number: 4 (lower is better)
Translates to: KVLRDLGRDELDRVYCTCAGSSK*GEHRLE
Trigger: TTCCAGCCTGTGTTCCCCTCACTTGGAGGAACCAGC...GCATGTGCAGTATACACGGTCTAACTCATCTCTCCCCAGATCTCTCAGAACCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp GGACCCAAGGCTCAGGATTCCCCGACCCAGAGCCCCTTTAAGGCAGATAATTTGCTGCTGACTTTGCCGTaGGCATTTTACTCCTCATTC +
Preference number: 4 (lower is better)
Translates to: GPKAQDSPTQSPFKADNLLLTLP*AFYSSF
Trigger: GAATGAGGAGTAAAATGCTCACGGCAAAGTCAGCAG...CAAATTATCTGCCTTAAAGGGGCTCTGGGTCGGGGAATCCTGAGCCTTGGGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp ACCAGTGCTGCTGACTTTGCCGTGAGCATTTTACTCCTCATTCTCCCATCCTGGCAGTCTCCTCACCTGTaGAATGAGAAGTCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: TSAADFAVSILLLILPSWQSPHL*NEKSGP
Trigger: TGGGCCAGACTTCTCATTTCACAGGTGAGGAGACTG...CCAGGATGGGAGAATGAGGAGTAAAATGCTCACGGCAAAGTCAGCAGCACTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000247291.8
ENST00000372298.1
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp ATCAGCCAGTCATGGCCAAATAACCTCATTCCTGAACTGGTTGAAACCAGTGGGAGCCCACACTGGAAATaGGGTGTAGGCAGGGTCCCT +
Preference number: 4 (lower is better)
Translates to: ISQSWPNNLIPELVETSGSPHWK*GVGRVP
Trigger: AGGGACCCTGCCTACACCTCATTTCCAGTGTGGGCT...CCCACTGGTTTCAACCAGTTCAGGAATGAGGTTATTTGGCCATGACTGGCTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp ACCAGTGCTGCTGACTTTGCCGTGAGCATTTTACTCCTCATTCTCCCATCCTGGCCCACCCCCATTCAATaGGAAAACCCTCTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: TSAADFAVSILLLILPSWPTPIQ*ENPLFC
Trigger: GCAGAAGAGAGGGTTTTCTCATTGAATGGGGGTGGG...CCAGGATGGGAGAATGAGGAGTAAAATGCTCACGGCAAAGTCAGCAGCACTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp AAGGTTCTGAGAGATCTGGGGAGAGATGAGTTAGACCGTGTATACTGCACATGCTCCAGGGACAACTCTTaGGACCCTCTCCTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: KVLRDLGRDELDRVYCTCSRDNS*DPLLPG
Trigger: TCCTGGGAGGAGAGGGTCTCAAGAGTTGTCCCTGGA...GCATGTGCAGTATACACGGTCTAACTCATCTCTCCCCAGATCTCTCAGAACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp GATTGGGGTCAGACAAGCAACCTTGTATTTCTCAGTCTTGGCTTACCAGTGCTGTCCAGGGACAACTCTTaGGACCCTCTCCTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: DWGQTSNLVFLSLGLPVLSRDNS*DPLLPG
Trigger: TCCTGGGAGGAGAGGGTCTCAAGAGTTGTCCCTGGA...CAGCACTGGTAAGCCAAGACTGAGAAATACAAGGTTGCTTGTCTGACCCCAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp GATTGGGGTCAGACAAGCAACCTTGTATTTCTCAGTCTTGGCTTACCAGTGCTGACCCGAAAGAGGCCCTaGAGCCTTGTCCCTACTCCA +
Preference number: 4 (lower is better)
Translates to: DWGQTSNLVFLSLGLPVLTRKRP*SLVPTP
Trigger: TGGAGTAGGGACAAGGCTGCAGGGCCTCTTTCGGGT...CAGCACTGGTAAGCCAAGACTGAGAAATACAAGGTTGCTTGTCTGACCCCAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp ATGAGAGAAGCAGAGTCAGGTTTCAAGCAGATTGGGGTCAGACAAGCAACCTTGACCCGAAAGAGGCCCTaGAGCCTTGTCCCTACTCCA +
Preference number: 4 (lower is better)
Translates to: MREAESGFKQIGVRQATLTRKRP*SLVPTP
Trigger: TGGAGTAGGGACAAGGCTGCAGGGCCTCTTTCGGGT...CAAGGTTGCTTGTCTGACCCCAATCTGCTTGAAACCTGACTCTGCTTCTCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp TCCTGTCCACTTAAGGTGTTGCAAAGGCTCTGCCAAGACTCTCACCCAGTCTTGTTGAAGGGCTCCCAATaGCAAGCTCCTTTCCTTCCC +
Preference number: 4 (lower is better)
Translates to: SCPLKVLQRLCQDSHPVLLKGSQ*QAPFLP
Trigger: GGGAAGGAAAGGAGCTTGGCATTGGGAGCCCTTCAA...CAAGACTGGGTGAGAGTCTTGGCAGAGCCTTTGCAACACCTTAAGTGGACAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp AATGACCAAACAAATGAGAGAGAGAGAGATCACAGTGTGTCAAGAAGGGCAGCAACGCTGCCTCTCAGCTaGCTGCACAGGTGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: NDQTNERERDHSVSRRAATLPLS*LHRCGQ
Trigger: CTGGCCACACCTGTGCAGGCAGCTGAGAGGCAGCGT...TGCTGCCCTTCTTGACACACTGTGATCTCTCTCTCTCTCATTTGTTTGGTCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp ATGACCAAACAAATGAGAGAGAGAGAGATCACAGTGTGTCAAGAAGGGCAGCAACCCAGGCCTCACTTCTaGCTCCGAAGCCCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: MTKQMREREITVCQEGQQPRPHF*LRSPLL
Trigger: CAGCAGAGGGCTTCGGAGGCAGAAGTGAGGCCTGGG...TTGCTGCCCTTCTTGACACACTGTGATCTCTCTCTCTCTCATTTGTTTGGTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp AGAGAGAGATCACAGTGTGTCAAGAAGGGCAGCAAGATCGGGAGGGAGGTATGGCGTGTATACTGCACATaGCAGGACAACATGGGAGGA +
Preference number: 4 (lower is better)
Translates to: RERSQCVKKGSKIGREVWRVYCT*QDNMGG
Trigger: TCCTCCCATGTTGTCCTGGCATGTGCAGTATACACG...CCATACCTCCCTCCCGATCTTGCTGCCCTTCTTGACACACTGTGATCTCTCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp TGGGAGAGGGCGAATCCTGGACCAGGGTCTTCAGAGCAAGTGAAACCCTCTCCATTAGACCGTGTATACTaGACATGCCAGGACAACATG +
Preference number: 4 (lower is better)
Translates to: WERANPGPGSSEQVKPSPLDRVY*TCQDNM
Trigger: CATGTTGTCCTGGCATGTGCAGTATACACGGTCTAA...TGGAGAGGGTTTCACTTGCTCTGAAGACCCTGGTCCAGGATTCGCCCTCTCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp GCTGACTTGAAGGCATGGGAGAGGGCGAATCCTGGACCAGGGTCTTCAGAGCAATTAGACCGTGTATACTaGACATGCCAGGACAACATG +
Preference number: 4 (lower is better)
Translates to: ADLKAWERANPGPGSSEQLDRVY*TCQDNM
Trigger: CATGTTGTCCTGGCATGTGCAGTATACACGGTCTAA...TTGCTCTGAAGACCCTGGTCCAGGATTCGCCCTCTCCCATGCCTTCAAGTCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp GCCAGAGAGCAGGACTGGAGGGTTCCTTCTGGTACCTTCTTGAAGGGCTCCCAATTAGACCGTGTATACTaGACATGCCAGGACAACATG +
Preference number: 4 (lower is better)
Translates to: AREQDWRVPSGTFLKGSQLDRVY*TCQDNM
Trigger: CATGTTGTCCTGGCATGTGCAGTATACACGGTCTAA...TTGGGAGCCCTTCAAGAAGGTACCAGAAGGAACCCTCCAGTCCTGCTCTCTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp GAGCCATGGCACTGTCCAAGGAAACCCGAAAGAGGCCCTGCAGCCTTGTCCCTAAGGGTTCTAAAATCCTaGGAGTCCATAAGAAAGGAC +
Preference number: 4 (lower is better)
Translates to: EPWHCPRKPERGPAALSLRVLKS*ESIRKD
Trigger: GTCCTTTCTTATGGACTCGCAGGATTTTAGAACCCT...TAGGGACAAGGCTGCAGGGCCTCTTTCGGGTTTCCTTGGACAGTGCCATGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp GGCACCAGTCTCCTCACCTGTGAAATGAGAAGTCTGGCCCAGCTACCCTCCAGGCAGGGAGGAATGTTTTaGTGGGGTTTAAACTTCAAC +
Preference number: 4 (lower is better)
Translates to: GTSLLTCEMRSLAQLPSRQGGMF*WGLNFN
Trigger: GTTGAAGTTTAAACCCCAGCAAAACATTCCTCCCTG...CCTGGAGGGTAGCTGGGCCAGACTTCTCATTTCACAGGTGAGGAGACTGGTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp AACCCGAAAGAGGCCCTGCAGCCTTGTCCCTACTCCAAGGTCTTCTCAGAGTGGGGCTGTGAGCTTTTCTaGAAGGTTCTCTTCATCACT +
Preference number: 4 (lower is better)
Translates to: NPKEALQPCPYSKVFSEWGCELF*KVLFIT
Trigger: AGTGATGAAGAGAACCTTCCAGAAAAGCTCACAGCC...CCACTCTGAGAAGACCTTGGAGTAGGGACAAGGCTGCAGGGCCTCTTTCGGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp CACCTCCCTCTGGAGATAAGCCTGACCTTGGGCAAGGCACTTAATCCCTGTGGGGGCTGTGAGCTTTTCTaGAAGGTTCTCTTCATCACT +
Preference number: 4 (lower is better)
Translates to: HLPLEISLTLGKALNPCGGCELF*KVLFIT
Trigger: AGTGATGAAGAGAACCTTCCAGAAAAGCTCACAGCC...CCCACAGGGATTAAGTGCCTTGCCCAAGGTCAGGCTTATCTCCAGAGGGAGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000247291.8
ENST00000372298.1
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp ACCCTCAATGACCAAACAAATGAGAGAGAGAGAGATCACAGTGTGTCAAGAAGGGGGGGCCAACTGGCTTaGGGCTGCTCTCGTTGGCTT +
Preference number: 4 (lower is better)
Translates to: TLNDQTNERERDHSVSRRGGQLA*GCSRWL
Trigger: AAGCCAACGAGAGCAGCCCCAAGCCAGTTGGCCCCC...CCTTCTTGACACACTGTGATCTCTCTCTCTCTCATTTGTTTGGTCATTGAGGGT
52% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 6 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372301.2
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp TGCACATGCCAGGACAACATGGGAGGATGTAAAGCTTATAATAGCAGGTCAATAGAGGGGAACACAGGCTaGAAGCCTCCCTGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: CTCQDNMGGCKAYNSRSIEGNTG*KPPCPG
Trigger: GCCAGGGCAGGGAGGCTTCCAGCCTGTGTTCCCCTC...TATTGACCTGCTATTATAAGCTTTACATCCTCCCATGTTGTCCTGGCATGTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp ATTGGGGTCAGACAAGCAACCTTGTATTTCTCAGTCTTGGCTTACCAGTGCTGCGCCAGAGAGCAGGACTaGAGGGTTCCTTCTGGTACC +
Preference number: 4 (lower is better)
Translates to: IGVRQATLYFSVLAYQCCAREQD*RVPSGT
Trigger: GGTACCAGAAGGAACCCTCCAGTCCTGCTCTCTGGC...GCAGCACTGGTAAGCCAAGACTGAGAAATACAAGGTTGCTTGTCTGACCCCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp ACCAGTCTCCTCACCTGTGAAATGAGAAGTCTGGCCCAGCTACCCTCCAGGGTGAGGTTTCAAGCAGATTaGGGTCAGACAAGCAACCTT +
Preference number: 4 (lower is better)
Translates to: TSLLTCEMRSLAQLPSRVRFQAD*GQTSNL
Trigger: AAGGTTGCTTGTCTGACCCCAATCTGCTTGAAACCT...CACCCTGGAGGGTAGCTGGGCCAGACTTCTCATTTCACAGGTGAGGAGACTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000247291.8
ENST00000372298.1
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp AGAGATGAGTTAGACCGTGTATACTGCACATGCCAGGACAACATGGGAGGATGTGGAGAGGGCGAATCCTaGACCAGGGTCTTCAGAGCA +
Preference number: 4 (lower is better)
Translates to: RDELDRVYCTCQDNMGGCGEGES*TRVFRA
Trigger: TGCTCTGAAGACCCTGGTCCAGGATTCGCCCTCTCC...ACATCCTCCCATGTTGTCCTGGCATGTGCAGTATACACGGTCTAACTCATCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp GATTGGGGTCAGACAAGCAACCTTGTATTTCTCAGTCTTGGCTTACCAGTGCTGGGAGAGGGCGAATCCTaGACCAGGGTCTTCAGAGCA +
Preference number: 4 (lower is better)
Translates to: DWGQTSNLVFLSLGLPVLGEGES*TRVFRA
Trigger: TGCTCTGAAGACCCTGGTCCAGGATTCGCCCTCTCC...CAGCACTGGTAAGCCAAGACTGAGAAATACAAGGTTGCTTGTCTGACCCCAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp CATGGCACTGTCCAAGGAAACCCGAAAGAGGCCCTGCAGCCTTGTCCCTACTCCAAGATCAGCCAGTCATaGCCAAATAACCTCATTCCT +
Preference number: 4 (lower is better)
Translates to: HGTVQGNPKEALQPCPYSKISQS*PNNLIP
Trigger: AGGAATGAGGTTATTTGGCCATGACTGGCTGATCTT...GGAGTAGGGACAAGGCTGCAGGGCCTCTTTCGGGTTTCCTTGGACAGTGCCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp GAGAGAGAGATCACAGTGTGTCAAGAAGGGCAGCAAGATCGGGAGGGAGGTATGGGACAAAGCCATACTTaGCAGTCCTCACGTTACTGG +
Preference number: 4 (lower is better)
Translates to: EREITVCQEGQQDREGGMGQSHT*QSSRYW
Trigger: CCAGTAACGTGAGGACTGCCAAGTATGGCTTTGTCC...CATACCTCCCTCCCGATCTTGCTGCCCTTCTTGACACACTGTGATCTCTCTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp AGATTGGGGTCAGACAAGCAACCTTGTATTTCTCAGTCTTGGCTTACCAGTGCTGAACGCCTTCCCTCCTaGAGGAGACAAAGAGGCGGC +
Preference number: 4 (lower is better)
Translates to: RLGSDKQPCISQSWLTSAERLPS*RRQRGG
Trigger: GCCGCCTCTTTGTCTCCTCCAGGAGGGAAGGCGTTC...AGCACTGGTAAGCCAAGACTGAGAAATACAAGGTTGCTTGTCTGACCCCAATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372314.3
CDS-3UTR TCA 90 bp TCCTCCCTTAAGGAGAATTCCTGCAGTCTTGTAGAACTGTGGAACTTACTGAAATCTCCTGCCGGGCTTTaGGCAAGCCGAACGCCTTCC +
Preference number: 4 (lower is better)
Translates to: SSLKENSCSLVELWNLLKSPAGL*ASRTPS
Trigger: GGAAGGCGTTCGGCTTGCTCAAAGCCCGGCAGGAGA...TTTCAGTAAGTTCCACAGTTCTACAAGACTGCAGGAATTCTCCTTAAGGGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp AGATTGGGGTCAGACAAGCAACCTTGTATTTCTCAGTCTTGGCTTACCAGTGCTACAGAAACTCCCGGTTaGTCTCGGCCAGCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: RLGSDKQPCISQSWLTSATETPG*SRPASS
Trigger: AGAGGAGGCTGGCCGAGATCAACCGGGAGTTTCTGT...AGCACTGGTAAGCCAAGACTGAGAAATACAAGGTTGCTTGTCTGACCCCAATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372298.1
ENST00000372300.5
ENST00000372302.5
ENST00000372314.3
CDS-3UTR TCA 90 bp ACCAGTGCTGCTGACTTTGCCGTGAGCATTTTACTCCTCATTCTCCCATCCTGGCCCTCCTGTCACCTCTaGGATCATCTTCTTCATCTC +
Preference number: 4 (lower is better)
Translates to: TSAADFAVSILLLILPSWPSCHL*DHLLHL
Trigger: GAGATGAAGAAGATGATCTCAGAGGTGACAGGAGGG...CCAGGATGGGAGAATGAGGAGTAAAATGCTCACGGCAAAGTCAGCAGCACTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp CCCTCAATGACCAAACAAATGAGAGAGAGAGAGATCACAGTGTGTCAAGAAGGGGCTGGTTCCTCCAAGTaGGGGGAACACAGGCTGGAA +
Preference number: 4 (lower is better)
Translates to: PSMTKQMREREITVCQEGAGSSK*GEHRLE
Trigger: TTCCAGCCTGTGTTCCCCTCACTTGGAGGAACCAGC...CCCTTCTTGACACACTGTGATCTCTCTCTCTCTCATTTGTTTGGTCATTGAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp AGCAGATTGGGGTCAGACAAGCAACCTTGTATTTCTCAGTCTTGGCTTACCAGTGGAACAGCACTGAGCTaGCCTTTCCCCCAAAACCCC +
Preference number: 4 (lower is better)
Translates to: SRLGSDKQPCISQSWLTSGTALS*PFPQNP
Trigger: GGGGTTTTGGGGGAAAGGTCAGCTCAGTGCTGTTCC...ACTGGTAAGCCAAGACTGAGAAATACAAGGTTGCTTGTCTGACCCCAATCTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp CTCATTCCTGAACTGGTTGAAACCAGTGGGTTAACCCAACCTGGCCATTTCCTCAAGGTGGAACAGCACTaGGCTGACCTTTCCCCCAAA +
Preference number: 4 (lower is better)
Translates to: LIPELVETSGLTQPGHFLKVEQH*ADLSPK
Trigger: TTTGGGGGAAAGGTCAGCTCAGTGCTGTTCCACCTT...GAGGAAATGGCCAGGTTGGGTTAACCCACTGGTTTCAACCAGTTCAGGAATGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp GCTGACTTTGACATCTTCCTGCATGAATTACAAGAGGCAGCTTCAGAGGCCTGGTCCTCACCTGTGAAATaGGAAGTCTGGCCCAGCTAC +
Preference number: 4 (lower is better)
Translates to: ADFDIFLHELQEAASEAWSSPVK*EVWPSY
Trigger: GTAGCTGGGCCAGACTTCTCATTTCACAGGTGAGGA...CCAGGCCTCTGAAGCTGCCTCTTGTAATTCATGCAGGAAGATGTCAAAGTCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp CCTCTGAGTCATAGGGACAAAGCCATACTTGGCAGTCCTCACGTTACTGGTTACCAGTCTCCTCACCTGTaGAATGAGAAGTCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: PLSHRDKAILGSPHVTGYQSPHL*NEKSGP
Trigger: TGGGCCAGACTTCTCATTTCACAGGTGAGGAGACTG...GTAACCAGTAACGTGAGGACTGCCAAGTATGGCTTTGTCCCTATGACTCAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp TATACTGCACATGCCAGGACAACATGGGAGGATGTAAAGCTTATAATAGCAGGTTGTAGGCAGGGTCCCTaGACATCTGGGCCCCAGTCC +
Preference number: 4 (lower is better)
Translates to: YTAHARTTWEDVKLIIAGCRQGP*TSGPQS
Trigger: GGACTGGGGCCCAGATGTTCAGGGACCCTGCCTACA...ACCTGCTATTATAAGCTTTACATCCTCCCATGTTGTCCTGGCATGTGCAGTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp GACTGCAGGGAAGTCACCCCATACCTCCCCCTTCCTAACATTTATCTCATTGTCGGCAGTGAGGAGGGGTaGGGACATCTAATGATCTTG +
Preference number: 4 (lower is better)
Translates to: DCREVTPYLPLPNIYLIVGSEEG*GHLMIL
Trigger: CAAGATCATTAGATGTCCTCACCCCTCCTCACTGCC...GACAATGAGATAAATGTTAGGAAGGGGGAGGTATGGGGTGACTTCCCTGCAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp GCTGACTTTGACATCTTCCTGCATGAATTACAAGAGGCAGCTTCAGAGGCCTGGGGCAGTGAGGAGGGGTaGGGACATCTAATGATCTTG +
Preference number: 4 (lower is better)
Translates to: ADFDIFLHELQEAASEAWGSEEG*GHLMIL
Trigger: CAAGATCATTAGATGTCCTCACCCCTCCTCACTGCC...CCAGGCCTCTGAAGCTGCCTCTTGTAATTCATGCAGGAAGATGTCAAAGTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp CCTCTGAGTCATAGGGACAAAGCCATACTTGGCAGTCCTCACGTTACTGGTTACGCCTTCCTCTCTGAGTaGGGAACAGGGACACTGAAT +
Preference number: 4 (lower is better)
Translates to: PLSHRDKAILGSPHVTGYAFLSE*GTGTLN
Trigger: ATTCAGTGTCCCTGTTCCTCACTCAGAGAGGAAGGC...GTAACCAGTAACGTGAGGACTGCCAAGTATGGCTTTGTCCCTATGACTCAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp ACCAGTCTCCTCACCTGTGAAATGAGAAGTCTGGCCCAGCTACCCTCCAGGGTGAACTGTGGAACTTACTaGAATAAGCCTGACTGGTTC +
Preference number: 4 (lower is better)
Translates to: TSLLTCEMRSLAQLPSRVNCGTY*NKPDWF
Trigger: GAACCAGTCAGGCTTATTTCAGTAAGTTCCACAGTT...CACCCTGGAGGGTAGCTGGGCCAGACTTCTCATTTCACAGGTGAGGAGACTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp TCACAGTGTGTCAAGAAGGGCAGCAAGATCGGGAGGGAGGTATGGGGTGGGAAGAACTGTGGAACTTACTaGAATAAGCCTGACTGGTTC +
Preference number: 4 (lower is better)
Translates to: SQCVKKGSKIGREVWGGKNCGTY*NKPDWF
Trigger: GAACCAGTCAGGCTTATTTCAGTAAGTTCCACAGTT...CTTCCCACCCCATACCTCCCTCCCGATCTTGCTGCCCTTCTTGACACACTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp TGGCACTGTCCAAGGAAACCCGAAAGAGGCCCTGCAGCCTTGTCCCTACTCCAAAACTGTGGAACTTACTaGAATAAGCCTGACTGGTTC +
Preference number: 4 (lower is better)
Translates to: WHCPRKPERGPAALSLLQNCGTY*NKPDWF
Trigger: GAACCAGTCAGGCTTATTTCAGTAAGTTCCACAGTT...TTGGAGTAGGGACAAGGCTGCAGGGCCTCTTTCGGGTTTCCTTGGACAGTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp GCAGAGTCAGGTTTCAAGCAGATTGGGGTCAGACAAGCAACCTTGTATTTCTCAACCCGAAAGAGGCCCTaGAGCCTTGTCCCTACTCCA +
Preference number: 4 (lower is better)
Translates to: AESGFKQIGVRQATLYFSTRKRP*SLVPTP
Trigger: TGGAGTAGGGACAAGGCTGCAGGGCCTCTTTCGGGT...TGAGAAATACAAGGTTGCTTGTCTGACCCCAATCTGCTTGAAACCTGACTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp ATTCCCCGACCCAGAGCCCCTTTAAGGCAGATAATTTGTGCTTTACAAAGACATTGCCTCTCAGCTGCCTaGACAGGTGTGGCCAGAGAG +
Preference number: 4 (lower is better)
Translates to: IPRPRAPLRQIICALQRHCLSAA*TGVARE
Trigger: CTCTCTGGCCACACCTGTGCAGGCAGCTGAGAGGCA...ATGTCTTTGTAAAGCACAAATTATCTGCCTTAAAGGGGCTCTGGGTCGGGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp AATGACCAAACAAATGAGAGAGAGAGAGATCACAGTGTGTCAAGAAGGGCAGCAAGTAGGGCTGCACGCTaGCTCTCAGCTGCCTGCACA +
Preference number: 4 (lower is better)
Translates to: NDQTNERERDHSVSRRAASRAAR*LSAACT
Trigger: TGTGCAGGCAGCTGAGAGGCAGCGTGCAGCCCTACT...TGCTGCCCTTCTTGACACACTGTGATCTCTCTCTCTCTCATTTGTTTGGTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp TGCACATGCCAGGACAACATGGGAGGATGTAAAGCTTATAATAGCAGGTCAATAGCCTCCGAAGCCCTCTaGTGCCCCAGTAAGGGACAG +
Preference number: 4 (lower is better)
Translates to: CTCQDNMGGCKAYNSRSIASEAL*CPSKGQ
Trigger: CTGTCCCTTACTGGGGCAGCAGAGGGCTTCGGAGGC...TATTGACCTGCTATTATAAGCTTTACATCCTCCCATGTTGTCCTGGCATGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp ATGACCAAACAAATGAGAGAGAGAGAGATCACAGTGTGTCAAGAAGGGCAGCAACTAGGCCCCCAGGACTaGAGGGAAGTCACCCCATAC +
Preference number: 4 (lower is better)
Translates to: MTKQMREREITVCQEGQQLGPQD*REVTPY
Trigger: GTATGGGGTGACTTCCCTGCAGTCCTGGGGGCCTAG...TTGCTGCCCTTCTTGACACACTGTGATCTCTCTCTCTCTCATTTGTTTGGTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp TCCCCGACCCAGAGCCCCTTTAAGGCAGATAATTTGTGCTTTACAAAGACATTGAGCTGGGGCCACACCTaGTTGCTCTCCTCCCTTAAG +
Preference number: 4 (lower is better)
Translates to: SPTQSPFKADNLCFTKTLSWGHT*LLSSLK
Trigger: CTTAAGGGAGGAGAGCAAGCAGGTGTGGCCCCAGCT...CAATGTCTTTGTAAAGCACAAATTATCTGCCTTAAAGGGGCTCTGGGTCGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp CTAAAATCCTGCGAGTCCATAAGAAAGGACACAGGTGACCCCAGTTCAATTCCCAACGCCTTCCCTCCTTaGAACCTGTTGCTGAGCTCG +
Preference number: 4 (lower is better)
Translates to: LKSCESIRKDTGDPSSIPNAFPP*NLLLSS
Trigger: CGAGCTCAGCAACAGGTTCCAAGGAGGGAAGGCGTT...GGGAATTGAACTGGGGTCACCTGTGTCCTTTCTTATGGACTCGCAGGATTTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372298.1
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
CDS-3UTR CCA 90 bp GAGAGATCACAGTGTGTCAAGAAGGGCAGCAAGATCGGGAGGGAGGTATGGGGTGGCTGTGAGCTTTTCTaGAAGGTTCTCTTCATCACT +
Preference number: 4 (lower is better)
Translates to: ERSQCVKKGSKIGREVWGGCELF*KVLFIT
Trigger: AGTGATGAAGAGAACCTTCCAGAAAAGCTCACAGCC...ACCCCATACCTCCCTCCCGATCTTGCTGCCCTTCTTGACACACTGTGATCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372301.2
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp CAAACCCTCAATGACCAAACAAATGAGAGAGAGAGAGATCACAGTGTGTCAAGAGGGGGCCAACTGGCTTaGGGCTGCTCTCGTTGGCTT +
Preference number: 4 (lower is better)
Translates to: QTLNDQTNERERDHSVSRGGQLA*GCSRWL
Trigger: AAGCCAACGAGAGCAGCCCCAAGCCAGTTGGCCCCC...TCTTGACACACTGTGATCTCTCTCTCTCTCATTTGTTTGGTCATTGAGGGTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372301.2
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp GGTCAGACAAGCAACCTTGTATTTCTCAGTCTTGGCTTACCAGTGCTGCTGACTGTGACACCAGAGCACTaGAGCCATGGCACTGTCCAA +
Preference number: 4 (lower is better)
Translates to: GQTSNLVFLSLGLPVLLTVTPEH*SHGTVQ
Trigger: TTGGACAGTGCCATGGCTCCAGTGCTCTGGTGTCAC...AGTCAGCAGCACTGGTAAGCCAAGACTGAGAAATACAAGGTTGCTTGTCTGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp AAGGTTCTGAGAGATCTGGGGAGAGATGAGTTAGACCGTGTATACTGCACATGCGTGACACCAGAGCACTaGAGCCATGGCACTGTCCAA +
Preference number: 4 (lower is better)
Translates to: KVLRDLGRDELDRVYCTCVTPEH*SHGTVQ
Trigger: TTGGACAGTGCCATGGCTCCAGTGCTCTGGTGTCAC...GCATGTGCAGTATACACGGTCTAACTCATCTCTCCCCAGATCTCTCAGAACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp AGAGATGAGTTAGACCGTGTATACTGCACATGCCAGGACAACATGGGAGGATGTGTGACACCAGAGCACTaGAGCCATGGCACTGTCCAA +
Preference number: 4 (lower is better)
Translates to: RDELDRVYCTCQDNMGGCVTPEH*SHGTVQ
Trigger: TTGGACAGTGCCATGGCTCCAGTGCTCTGGTGTCAC...ACATCCTCCCATGTTGTCCTGGCATGTGCAGTATACACGGTCTAACTCATCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp TGGCACTGTCCAAGGAAACCCGAAAGAGGCCCTGCAGCCTTGTCCCTACTCCAACATGCCAGGACAACATaGGAGGATGTAAAGCTTATA +
Preference number: 4 (lower is better)
Translates to: WHCPRKPERGPAALSLLQHARTT*EDVKLI
Trigger: TATAAGCTTTACATCCTCCCATGTTGTCCTGGCATG...TTGGAGTAGGGACAAGGCTGCAGGGCCTCTTTCGGGTTTCCTTGGACAGTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp AATGTTTTGCTGGGGTTTAAACTTCAACTAGGCCTGTGTGCATTTGAAGCAGATGGGTCCCTGAACATCTaGGCCCCAGTCCAGGGCACC +
Preference number: 4 (lower is better)
Translates to: NVLLGFKLQLGLCAFEADGSLNI*APVQGT
Trigger: GGTGCCCTGGACTGGGGCCCAGATGTTCAGGGACCC...ATCTGCTTCAAATGCACACAGGCCTAGTTGAAGTTTAAACCCCAGCAAAACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp AGATTGGGGTCAGACAAGCAACCTTGTATTTCTCAGTCTTGGCTTACCAGTGCTGGAGAGGGCGAATCCTaGACCAGGGTCTTCAGAGCA +
Preference number: 4 (lower is better)
Translates to: RLGSDKQPCISQSWLTSAGEGES*TRVFRA
Trigger: TGCTCTGAAGACCCTGGTCCAGGATTCGCCCTCTCC...AGCACTGGTAAGCCAAGACTGAGAAATACAAGGTTGCTTGTCTGACCCCAATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp GATTGGGGTCAGACAAGCAACCTTGTATTTCTCAGTCTTGGCTTACCAGTGCTGGCTGACTTGAAGGCATaGGAGAGGGCGAATCCTGGA +
Preference number: 4 (lower is better)
Translates to: DWGQTSNLVFLSLGLPVLADLKA*ERANPG
Trigger: TCCAGGATTCGCCCTCTCCCATGCCTTCAAGTCAGC...CAGCACTGGTAAGCCAAGACTGAGAAATACAAGGTTGCTTGTCTGACCCCAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp CCGAGTGGCTGTGTCCTGGGTGACACCAGAGCACTGGAGCCATGGCACTGTCCATGTCCATTTCATTATTaGATTCTTAACTGTTGGCCT +
Preference number: 4 (lower is better)
Translates to: PSGCVLGDTRALEPWHCPCPFHY*ILNCWP
Trigger: AGGCCAACAGTTAAGAATCCAATAATGAAATGGACA...TGGACAGTGCCATGGCTCCAGTGCTCTGGTGTCACCCAGGACACAGCCACTCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp CAGGCCTCACTTCTGCCTCCGAAGCCCTCTGCTGCCCCAGTAAGGGACAGTAGGTGTCCATTTCATTATTaGATTCTTAACTGTTGGCCT +
Preference number: 4 (lower is better)
Translates to: QASLLPPKPSAAPVRDSRCPFHY*ILNCWP
Trigger: AGGCCAACAGTTAAGAATCCAATAATGAAATGGACA...CCTACTGTCCCTTACTGGGGCAGCAGAGGGCTTCGGAGGCAGAAGTGAGGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp GATTGGGGTCAGACAAGCAACCTTGTATTTCTCAGTCTTGGCTTACCAGTGCTGACAAAGAGGCGGCCTTaGAACCTGTTGCTGAGCTCG +
Preference number: 4 (lower is better)
Translates to: DWGQTSNLVFLSLGLPVLTKRRP*NLLLSS
Trigger: CGAGCTCAGCAACAGGTTCCAAGGCCGCCTCTTTGT...CAGCACTGGTAAGCCAAGACTGAGAAATACAAGGTTGCTTGTCTGACCCCAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372314.3
CDS-3UTR TCA 90 bp TTTCAAGCAGATTGGGGTCAGACAAGCAACCTTGTATTTCTCAGTCTTGGCTTACTTGGAACCTGTTGCTaGGCTCGCCCGACATGGCGA +
Preference number: 4 (lower is better)
Translates to: FQADWGQTSNLVFLSLGLLGTCC*ARPTWR
Trigger: TCGCCATGTCGGGCGAGCTCAGCAACAGGTTCCAAG...TAAGCCAAGACTGAGAAATACAAGGTTGCTTGTCTGACCCCAATCTGCTTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000247291.8
ENST00000372298.1
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp TGCATTAGGGTTCTAAAATCCTGCGAGTCCATAAGAAAGGACACAGGTGACCCCAAGGTGGAACAGCACTaGGCTGACCTTTCCCCCAAA +
Preference number: 4 (lower is better)
Translates to: CIRVLKSCESIRKDTGDPKVEQH*ADLSPK
Trigger: TTTGGGGGAAAGGTCAGCTCAGTGCTGTTCCACCTT...GGGGTCACCTGTGTCCTTTCTTATGGACTCGCAGGATTTTAGAACCCTAATGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp GACTGCAGGGAAGTCACCCCATACCTCCCCCTTCCTAACATTTATCTCATTGTCGCTTACCAGTGCTGCTaGCTTTGCCGTGAGCATTTT +
Preference number: 4 (lower is better)
Translates to: DCREVTPYLPLPNIYLIVAYQCC*LCREHF
Trigger: AAAATGCTCACGGCAAAGTCAGCAGCACTGGTAAGC...GACAATGAGATAAATGTTAGGAAGGGGGAGGTATGGGGTGACTTCCCTGCAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp GATTGGGGTCAGACAAGCAACCTTGTATTTCTCAGTCTTGGCTTACCAGTGCTGTCCTCACCTGTGAAATaGGAAGTCTGGCCCAGCTAC +
Preference number: 4 (lower is better)
Translates to: DWGQTSNLVFLSLGLPVLSSPVK*EVWPSY
Trigger: GTAGCTGGGCCAGACTTCTCATTTCACAGGTGAGGA...CAGCACTGGTAAGCCAAGACTGAGAAATACAAGGTTGCTTGTCTGACCCCAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000247291.8
ENST00000372298.1
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp AAACCCTCAATGACCAAACAAATGAGAGAGAGAGAGATCACAGTGTGTCAAGAATGTAGGCAGGGTCCCTaGACATCTGGGCCCCAGTCC +
Preference number: 4 (lower is better)
Translates to: KPSMTKQMREREITVCQECRQGP*TSGPQS
Trigger: GGACTGGGGCCCAGATGTTCAGGGACCCTGCCTACA...TTCTTGACACACTGTGATCTCTCTCTCTCTCATTTGTTTGGTCATTGAGGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp AAGATCAGCCAGTCATGGCCAAATAACCTCATTCCTGAACTGGTTGAAACCAGTAGCCCACACTGGAAATaGGGTGTAGGCAGGGTCCCT +
Preference number: 4 (lower is better)
Translates to: KISQSWPNNLIPELVETSSPHWK*GVGRVP
Trigger: AGGGACCCTGCCTACACCTCATTTCCAGTGTGGGCT...ACTGGTTTCAACCAGTTCAGGAATGAGGTTATTTGGCCATGACTGGCTGATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp AAGCAGAGTCAGGTTTCAAGCAGATTGGGGTCAGACAAGCAACCTTGTATTTCTAGCCCACACTGGAAATaGGGTGTAGGCAGGGTCCCT +
Preference number: 4 (lower is better)
Translates to: KQSQVSSRLGSDKQPCISSPHWK*GVGRVP
Trigger: AGGGACCCTGCCTACACCTCATTTCCAGTGTGGGCT...AGAAATACAAGGTTGCTTGTCTGACCCCAATCTGCTTGAAACCTGACTCTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp CTCATTCCTGAACTGGTTGAAACCAGTGGGTTAACCCAACCTGGCCATTTCCTCAGGCCTGTGTGCATTTaGAGCAGATCCTTGAGCTCA +
Preference number: 4 (lower is better)
Translates to: LIPELVETSGLTQPGHFLRPVCI*SRSLSS
Trigger: TGAGCTCAAGGATCTGCTTCAAATGCACACAGGCCT...GAGGAAATGGCCAGGTTGGGTTAACCCACTGGTTTCAACCAGTTCAGGAATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp GATTGGGGTCAGACAAGCAACCTTGTATTTCTCAGTCTTGGCTTACCAGTGCTGGGCAGTGAGGAGGGGTaGGGACATCTAATGATCTTG +
Preference number: 4 (lower is better)
Translates to: DWGQTSNLVFLSLGLPVLGSEEG*GHLMIL
Trigger: CAAGATCATTAGATGTCCTCACCCCTCCTCACTGCC...CAGCACTGGTAAGCCAAGACTGAGAAATACAAGGTTGCTTGTCTGACCCCAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp GGTCAGACAAGCAACCTTGTATTTCTCAGTCTTGGCTTACCAGTGCTGCTGACTGGCAGTGAGGAGGGGTaGGGACATCTAATGATCTTG +
Preference number: 4 (lower is better)
Translates to: GQTSNLVFLSLGLPVLLTGSEEG*GHLMIL
Trigger: CAAGATCATTAGATGTCCTCACCCCTCCTCACTGCC...AGTCAGCAGCACTGGTAAGCCAAGACTGAGAAATACAAGGTTGCTTGTCTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp CTAAAATCCTGCGAGTCCATAAGAAAGGACACAGGTGACCCCAGTTCAATTCCCGCCTTCCTCTCTGAGTaGGGAACAGGGACACTGAAT +
Preference number: 4 (lower is better)
Translates to: LKSCESIRKDTGDPSSIPAFLSE*GTGTLN
Trigger: ATTCAGTGTCCCTGTTCCTCACTCAGAGAGGAAGGC...GGGAATTGAACTGGGGTCACCTGTGTCCTTTCTTATGGACTCGCAGGATTTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp GATTGGGGTCAGACAAGCAACCTTGTATTTCTCAGTCTTGGCTTACCAGTGCTGCCCACCCCCATTCAATaGGAAAACCCTCTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: DWGQTSNLVFLSLGLPVLPTPIQ*ENPLFC
Trigger: GCAGAAGAGAGGGTTTTCTCATTGAATGGGGGTGGG...CAGCACTGGTAAGCCAAGACTGAGAAATACAAGGTTGCTTGTCTGACCCCAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp AGAGATGAGTTAGACCGTGTATACTGCACATGCCAGGACAACATGGGAGGATGTCCAAGAGCCACAACCTaGAATAGATGCAGACTGCCC +
Preference number: 4 (lower is better)
Translates to: RDELDRVYCTCQDNMGGCPRATT*NRCRLP
Trigger: GGGCAGTCTGCATCTATTTCAGGTTGTGGCTCTTGG...ACATCCTCCCATGTTGTCCTGGCATGTGCAGTATACACGGTCTAACTCATCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp ATTGGGGTCAGACAAGCAACCTTGTATTTCTCAGTCTTGGCTTACCAGTGCTGCCCAAGAGCCACAACCTaGAATAGATGCAGACTGCCC +
Preference number: 4 (lower is better)
Translates to: IGVRQATLYFSVLAYQCCPRATT*NRCRLP
Trigger: GGGCAGTCTGCATCTATTTCAGGTTGTGGCTCTTGG...GCAGCACTGGTAAGCCAAGACTGAGAAATACAAGGTTGCTTGTCTGACCCCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp GGGAGAGATGAGTTAGACCGTGTATACTGCACATGCCAGGACAACATGGGAGGACAGAAAGAAGATGGTTaGAGTCCCAAGAAGCTGAGC +
Preference number: 4 (lower is better)
Translates to: GRDELDRVYCTCQDNMGGQKEDG*SPKKLS
Trigger: GCTCAGCTTCTTGGGACTTCAACCATCTTCTTTCTG...TCCTCCCATGTTGTCCTGGCATGTGCAGTATACACGGTCTAACTCATCTCTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp TCCTGTCCACTTAAGGTGTTGCAAAGGCTCTGCCAAGACTCTCACCCAGTCTTGCATACTTCATCCACCTaGATTTGCCCGACAAACCCT +
Preference number: 4 (lower is better)
Translates to: SCPLKVLQRLCQDSHPVLHTSST*ICPTNP
Trigger: AGGGTTTGTCGGGCAAATTCAGGTGGATGAAGTATG...CAAGACTGGGTGAGAGTCTTGGCAGAGCCTTTGCAACACCTTAAGTGGACAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp TTAGACCGTGTATACTGCACATGCCAGGACAACATGGGAGGATGTAAAGCTTATACCCGAAAGAGGCCCTaGAGCCTTGTCCCTACTCCA +
Preference number: 4 (lower is better)
Translates to: LDRVYCTCQDNMGGCKAYTRKRP*SLVPTP
Trigger: TGGAGTAGGGACAAGGCTGCAGGGCCTCTTTCGGGT...ATAAGCTTTACATCCTCCCATGTTGTCCTGGCATGTGCAGTATACACGGTCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp ATTGGGGTCAGACAAGCAACCTTGTATTTCTCAGTCTTGGCTTACCAGTGCTGCTTGAAGGGCTCCCAATaGCAAGCTCCTTTCCTTCCC +
Preference number: 4 (lower is better)
Translates to: IGVRQATLYFSVLAYQCCLKGSQ*QAPFLP
Trigger: GGGAAGGAAAGGAGCTTGGCATTGGGAGCCCTTCAA...GCAGCACTGGTAAGCCAAGACTGAGAAATACAAGGTTGCTTGTCTGACCCCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp AAACCCTCAATGACCAAACAAATGAGAGAGAGAGAGATCACAGTGTGTCAAGAAACGCTGCCTCTCAGCTaGCTGCACAGGTGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: KPSMTKQMREREITVCQETLPLS*LHRCGQ
Trigger: CTGGCCACACCTGTGCAGGCAGCTGAGAGGCAGCGT...TTCTTGACACACTGTGATCTCTCTCTCTCTCATTTGTTTGGTCATTGAGGGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp CCTCTGAGTCATAGGGACAAAGCCATACTTGGCAGTCCTCACGTTACTGGTTACCGTGTATACTGCACATaGCAGGACAACATGGGAGGA +
Preference number: 4 (lower is better)
Translates to: PLSHRDKAILGSPHVTGYRVYCT*QDNMGG
Trigger: TCCTCCCATGTTGTCCTGGCATGTGCAGTATACACG...GTAACCAGTAACGTGAGGACTGCCAAGTATGGCTTTGTCCCTATGACTCAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp ACCAGTCTCCTCACCTGTGAAATGAGAAGTCTGGCCCAGCTACCCTCCAGGGTGACTTTGACATCTTCCTaGATGAATTACAAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: TSLLTCEMRSLAQLPSRVTLTSS*MNYKRQ
Trigger: CTGCCTCTTGTAATTCATGCAGGAAGATGTCAAAGT...CACCCTGGAGGGTAGCTGGGCCAGACTTCTCATTTCACAGGTGAGGAGACTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp CCTCTGAGTCATAGGGACAAAGCCATACTTGGCAGTCCTCACGTTACTGGTTACCTGGCCATTTCCTCATaGCTTACCTGTTTTCCTCCC +
Preference number: 4 (lower is better)
Translates to: PLSHRDKAILGSPHVTGYLAISS*LTCFPP
Trigger: GGGAGGAAAACAGGTAAGGCATGAGGAAATGGCCAG...GTAACCAGTAACGTGAGGACTGCCAAGTATGGCTTTGTCCCTATGACTCAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp GAGAGATCACAGTGTGTCAAGAAGGGCAGCAAGATCGGGAGGGAGGTATGGGGTCTTAAGGAGAATTCCTaGAGTCTTGTAGAACTGTGG +
Preference number: 4 (lower is better)
Translates to: ERSQCVKKGSKIGREVWGLKENS*SLVELW
Trigger: CCACAGTTCTACAAGACTGCAGGAATTCTCCTTAAG...ACCCCATACCTCCCTCCCGATCTTGCTGCCCTTCTTGACACACTGTGATCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp TTAGACCGTGTATACTGCACATGCCAGGACAACATGGGAGGATGTAAAGCTTATGAAATAGATGCAGACTaGCCCCGCCCTCCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: LDRVYCTCQDNMGGCKAYEIDAD*PRPPSR
Trigger: CCTGGAAGGAGGGCGGGGGCAGTCTGCATCTATTTC...ATAAGCTTTACATCCTCCCATGTTGTCCTGGCATGTGCAGTATACACGGTCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp AATGTTTTGCTGGGGTTTAAACTTCAACTAGGCCTGTGTGCATTTGAAGCAGATGGGGGCCAACTGGCTTaGGGCTGCTCTCGTTGGCTT +
Preference number: 4 (lower is better)
Translates to: NVLLGFKLQLGLCAFEADGGQLA*GCSRWL
Trigger: AAGCCAACGAGAGCAGCCCCAAGCCAGTTGGCCCCC...ATCTGCTTCAAATGCACACAGGCCTAGTTGAAGTTTAAACCCCAGCAAAACATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp GGTCAGACAAGCAACCTTGTATTTCTCAGTCTTGGCTTACCAGTGCTGCTGACTAAGGATGGAGAGTGCTaGTTCCTCCAAGTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: GQTSNLVFLSLGLPVLLTKDGEC*FLQVRG
Trigger: TCCCCTCACTTGGAGGAACCAGCACTCTCCATCCTT...AGTCAGCAGCACTGGTAAGCCAAGACTGAGAAATACAAGGTTGCTTGTCTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp AGAGATGAGTTAGACCGTGTATACTGCACATGCCAGGACAACATGGGAGGATGTAAGGATGGAGAGTGCTaGTTCCTCCAAGTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: RDELDRVYCTCQDNMGGCKDGEC*FLQVRG
Trigger: TCCCCTCACTTGGAGGAACCAGCACTCTCCATCCTT...ACATCCTCCCATGTTGTCCTGGCATGTGCAGTATACACGGTCTAACTCATCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp ATTGGGGTCAGACAAGCAACCTTGTATTTCTCAGTCTTGGCTTACCAGTGCTGCCTGGAGGGTTCCTTCTaGTACCTTCTTGAAGGGCTC +
Preference number: 4 (lower is better)
Translates to: IGVRQATLYFSVLAYQCCLEGSF*YLLEGL
Trigger: GAGCCCTTCAAGAAGGTACCAGAAGGAACCCTCCAG...GCAGCACTGGTAAGCCAAGACTGAGAAATACAAGGTTGCTTGTCTGACCCCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp CTAAAATCCTGCGAGTCCATAAGAAAGGACACAGGTGACCCCAGTTCAATTCCCCTGGAGGGTTCCTTCTaGTACCTTCTTGAAGGGCTC +
Preference number: 4 (lower is better)
Translates to: LKSCESIRKDTGDPSSIPLEGSF*YLLEGL
Trigger: GAGCCCTTCAAGAAGGTACCAGAAGGAACCCTCCAG...GGGAATTGAACTGGGGTCACCTGTGTCCTTTCTTATGGACTCGCAGGATTTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp ACCCTCAATGACCAAACAAATGAGAGAGAGAGAGATCACAGTGTGTCAAGAAGGGCCAGAGAGCAGGACTaGAGGGTTCCTTCTGGTACC +
Preference number: 4 (lower is better)
Translates to: TLNDQTNERERDHSVSRRAREQD*RVPSGT
Trigger: GGTACCAGAAGGAACCCTCCAGTCCTGCTCTCTGGC...CCTTCTTGACACACTGTGATCTCTCTCTCTCTCATTTGTTTGGTCATTGAGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp TCTTCAGAGCAAGTGAAACCCTCTCCAAGTGTTGACCTTGGAGGCTGTCTCTTCAACCTCCCTAAAAGGTaGAACAGCACTGAGCTGACC +
Preference number: 4 (lower is better)
Translates to: SSEQVKPSPSVDLGGCLFNLPKR*NSTELT
Trigger: GGTCAGCTCAGTGCTGTTCCACCTTTTAGGGAGGTT...GAAGAGACAGCCTCCAAGGTCAACACTTGGAGAGGGTTTCACTTGCTCTGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp GGACCCAAGGCTCAGGATTCCCCGACCCAGAGCCCCTTTAAGGCAGATAATTTGCATGCCAGGACAACATaGGAGGATGTAAAGCTTATA +
Preference number: 4 (lower is better)
Translates to: GPKAQDSPTQSPFKADNLHARTT*EDVKLI
Trigger: TATAAGCTTTACATCCTCCCATGTTGTCCTGGCATG...CAAATTATCTGCCTTAAAGGGGCTCTGGGTCGGGGAATCCTGAGCCTTGGGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp AGATTGGGGTCAGACAAGCAACCTTGTATTTCTCAGTCTTGGCTTACCAGTGCTGCTGACTTGAAGGCATaGGAGAGGGCGAATCCTGGA +
Preference number: 4 (lower is better)
Translates to: RLGSDKQPCISQSWLTSAADLKA*ERANPG
Trigger: TCCAGGATTCGCCCTCTCCCATGCCTTCAAGTCAGC...AGCACTGGTAAGCCAAGACTGAGAAATACAAGGTTGCTTGTCTGACCCCAATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp TGGGGCACCAGTCTCCTCACCTGTGAAATGAGAAGTCTGGCCCAGCTACCCTCCGTCTCACTTTCCTATTaGACTCTAAGTTCCATGAAT +
Preference number: 4 (lower is better)
Translates to: WGTSLLTCEMRSLAQLPSVSLSY*TLSSMN
Trigger: ATTCATGGAACTTAGAGTCCAATAGGAAAGTGAGAC...GGAGGGTAGCTGGGCCAGACTTCTCATTTCACAGGTGAGGAGACTGGTGCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp CCACCAAGACCTCCCAGTCCTGTCCACTTAAGGTGTTGCAAAGGCTCTGCCAAGCTCATTGTCATTGTCTaGGTCTCACTTTCCTATTGG +
Preference number: 4 (lower is better)
Translates to: PPRPPSPVHLRCCKGSAKLIVIV*VSLSYW
Trigger: CCAATAGGAAAGTGAGACCCAGACAATGACAATGAG...CTTGGCAGAGCCTTTGCAACACCTTAAGTGGACAGGACTGGGAGGTCTTGGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp ATGACCAAACAAATGAGAGAGAGAGAGATCACAGTGTGTCAAGAAGGGCAGCAAGCAGGGAACCCACGTTaGCTCCAACCACCAAGACCT +
Preference number: 4 (lower is better)
Translates to: MTKQMREREITVCQEGQQAGNPR*LQPPRP
Trigger: AGGTCTTGGTGGTTGGAGCCAACGTGGGTTCCCTGC...TTGCTGCCCTTCTTGACACACTGTGATCTCTCTCTCTCTCATTTGTTTGGTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp TCCTGTCCACTTAAGGTGTTGCAAAGGCTCTGCCAAGACTCTCACCCAGTCTTGTGGGTTAACCCAACCTaGCCATTTCCTCATGCCTTA +
Preference number: 4 (lower is better)
Translates to: SCPLKVLQRLCQDSHPVLWVNPT*PFPHAL
Trigger: TAAGGCATGAGGAAATGGCCAGGTTGGGTTAACCCA...CAAGACTGGGTGAGAGTCTTGGCAGAGCCTTTGCAACACCTTAAGTGGACAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp GGTCAGACAAGCAACCTTGTATTTCTCAGTCTTGGCTTACCAGTGCTGCTGACTCCCTCCTGTCACCTCTaGGATCATCTTCTTCATCTC +
Preference number: 4 (lower is better)
Translates to: GQTSNLVFLSLGLPVLLTPSCHL*DHLLHL
Trigger: GAGATGAAGAAGATGATCTCAGAGGTGACAGGAGGG...AGTCAGCAGCACTGGTAAGCCAAGACTGAGAAATACAAGGTTGCTTGTCTGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp TGCACATGCCAGGACAACATGGGAGGATGTAAAGCTTATAATAGCAGGTCAATAAGAAGAGGTGTGGAATaGGTGGGGATCAGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: CTCQDNMGGCKAYNSRSIRRGVE*VGISWG
Trigger: GCCCCAGCTGATCCCCACTCATTCCACACCTCTTCT...TATTGACCTGCTATTATAAGCTTTACATCCTCCCATGTTGTCCTGGCATGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp TCCCCGACCCAGAGCCCCTTTAAGGCAGATAATTTGTGCTTTACAAAGACATTGCTTCTGGTACCTTCTTaGAGGGCTCCCAATGCCAAG +
Preference number: 4 (lower is better)
Translates to: SPTQSPFKADNLCFTKTLLLVPS*RAPNAK
Trigger: CTTGGCATTGGGAGCCCTTCAAGAAGGTACCAGAAG...CAATGTCTTTGTAAAGCACAAATTATCTGCCTTAAAGGGGCTCTGGGTCGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp TCCCCGACCCAGAGCCCCTTTAAGGCAGATAATTTGTGCTTTACAAAGACATTGAAGGTGGAACAGCACTaGGCTGACCTTTCCCCCAAA +
Preference number: 4 (lower is better)
Translates to: SPTQSPFKADNLCFTKTLKVEQH*ADLSPK
Trigger: TTTGGGGGAAAGGTCAGCTCAGTGCTGTTCCACCTT...CAATGTCTTTGTAAAGCACAAATTATCTGCCTTAAAGGGGCTCTGGGTCGGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp GACTGCAGGGAAGTCACCCCATACCTCCCCCTTCCTAACATTTATCTCATTGTCCTGCTGACTTTGCCGTaGGCATTTTACTCCTCATTC +
Preference number: 4 (lower is better)
Translates to: DCREVTPYLPLPNIYLIVLLTLP*AFYSSF
Trigger: GAATGAGGAGTAAAATGCTCACGGCAAAGTCAGCAG...GACAATGAGATAAATGTTAGGAAGGGGGAGGTATGGGGTGACTTCCCTGCAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp TGCATTAGGGTTCTAAAATCCTGCGAGTCCATAAGAAAGGACACAGGTGACCCCGCTTACCAGTGCTGCTaGCTTTGCCGTGAGCATTTT +
Preference number: 4 (lower is better)
Translates to: CIRVLKSCESIRKDTGDPAYQCC*LCREHF
Trigger: AAAATGCTCACGGCAAAGTCAGCAGCACTGGTAAGC...GGGGTCACCTGTGTCCTTTCTTATGGACTCGCAGGATTTTAGAACCCTAATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000247291.8
ENST00000372298.1
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp GGTTTCAAGCAGATTGGGGTCAGACAAGCAACCTTGTATTTCTCAGTCTTGGCTTCCTCACCTGTGAAATaGGAAGTCTGGCCCAGCTAC +
Preference number: 4 (lower is better)
Translates to: GFKQIGVRQATLYFSVLASSPVK*EVWPSY
Trigger: GTAGCTGGGCCAGACTTCTCATTTCACAGGTGAGGA...AGCCAAGACTGAGAAATACAAGGTTGCTTGTCTGACCCCAATCTGCTTGAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000247291.8
ENST00000372298.1
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp TATACTGCACATGCCAGGACAACATGGGAGGATGTAAAGCTTATAATAGCAGGTAGCCCACACTGGAAATaGGGTGTAGGCAGGGTCCCT +
Preference number: 4 (lower is better)
Translates to: YTAHARTTWEDVKLIIAGSPHWK*GVGRVP
Trigger: AGGGACCCTGCCTACACCTCATTTCCAGTGTGGGCT...ACCTGCTATTATAAGCTTTACATCCTCCCATGTTGTCCTGGCATGTGCAGTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp ACCGTGTATACTGCACATGCCAGGACAACATGGGAGGATGTAAAGCTTATAATAAGCCTGATGCTGACTTaGAGGCATGGGAGAGGGCGA +
Preference number: 4 (lower is better)
Translates to: TVYTAHARTTWEDVKLIISLMLT*RHGRGR
Trigger: TCGCCCTCTCCCATGCCTTCAAGTCAGCATCAGGCT...TATTATAAGCTTTACATCCTCCCATGTTGTCCTGGCATGTGCAGTATACACGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp GGTTTCAAGCAGATTGGGGTCAGACAAGCAACCTTGTATTTCTCAGTCTTGGCTATCTGCTATCAGAGGTaGCTAAGGAGCCGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: GFKQIGVRQATLYFSVLAICYQR*LRSRRE
Trigger: TTCCCTGCGGCTCCTTAGTCACCTCTGATAGCAGAT...AGCCAAGACTGAGAAATACAAGGTTGCTTGTCTGACCCCAATCTGCTTGAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp TGCATTAGGGTTCTAAAATCCTGCGAGTCCATAAGAAAGGACACAGGTGACCCCAGGCCTGTGTGCATTTaGAGCAGATCCTTGAGCTCA +
Preference number: 4 (lower is better)
Translates to: CIRVLKSCESIRKDTGDPRPVCI*SRSLSS
Trigger: TGAGCTCAAGGATCTGCTTCAAATGCACACAGGCCT...GGGGTCACCTGTGTCCTTTCTTATGGACTCGCAGGATTTTAGAACCCTAATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp AGAGATGAGTTAGACCGTGTATACTGCACATGCCAGGACAACATGGGAGGATGTAGGCCTGTGTGCATTTaGAGCAGATCCTTGAGCTCA +
Preference number: 4 (lower is better)
Translates to: RDELDRVYCTCQDNMGGCRPVCI*SRSLSS
Trigger: TGAGCTCAAGGATCTGCTTCAAATGCACACAGGCCT...ACATCCTCCCATGTTGTCCTGGCATGTGCAGTATACACGGTCTAACTCATCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp GCAGAGTCAGGTTTCAAGCAGATTGGGGTCAGACAAGCAACCTTGTATTTCTCACCCACCCCCATTCAATaGGAAAACCCTCTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: AESGFKQIGVRQATLYFSPTPIQ*ENPLFC
Trigger: GCAGAAGAGAGGGTTTTCTCATTGAATGGGGGTGGG...TGAGAAATACAAGGTTGCTTGTCTGACCCCAATCTGCTTGAAACCTGACTCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp AGATTGGGGTCAGACAAGCAACCTTGTATTTCTCAGTCTTGGCTTACCAGTGCTCGACAAACCCTCCTCTaGGTCATAGGGACAAAGCCA +
Preference number: 4 (lower is better)
Translates to: RLGSDKQPCISQSWLTSARQTLL*VIGTKP
Trigger: TGGCTTTGTCCCTATGACTCAGAGGAGGGTTTGTCG...AGCACTGGTAAGCCAAGACTGAGAAATACAAGGTTGCTTGTCTGACCCCAATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp CCTCTGAGTCATAGGGACAAAGCCATACTTGGCAGTCCTCACGTTACTGGTTACCATACTTCATCCACCTaGATTTGCCCGACAAACCCT +
Preference number: 4 (lower is better)
Translates to: PLSHRDKAILGSPHVTGYHTSST*ICPTNP
Trigger: AGGGTTTGTCGGGCAAATTCAGGTGGATGAAGTATG...GTAACCAGTAACGTGAGGACTGCCAAGTATGGCTTTGTCCCTATGACTCAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp TCCCCGACCCAGAGCCCCTTTAAGGCAGATAATTTGTGCTTTACAAAGACATTGTTGAAGGGCTCCCAATaGCAAGCTCCTTTCCTTCCC +
Preference number: 4 (lower is better)
Translates to: SPTQSPFKADNLCFTKTLLKGSQ*QAPFLP
Trigger: GGGAAGGAAAGGAGCTTGGCATTGGGAGCCCTTCAA...CAATGTCTTTGTAAAGCACAAATTATCTGCCTTAAAGGGGCTCTGGGTCGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp GGCACCAGTCTCCTCACCTGTGAAATGAGAAGTCTGGCCCAGCTACCCTCCAGGTTGGCCTACAGCAAGTaGTTAATAAATATGTTCAGT +
Preference number: 4 (lower is better)
Translates to: GTSLLTCEMRSLAQLPSRLAYSK*LINMFS
Trigger: ACTGAACATATTTATTAAGCACTTGCTGTAGGCCAA...CCTGGAGGGTAGCTGGGCCAGACTTCTCATTTCACAGGTGAGGAGACTGGTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp CATGGCACTGTCCAAGGAAACCCGAAAGAGGCCCTGCAGCCTTGTCCCTACTCCTTGGCCTACAGCAAGTaGTTAATAAATATGTTCAGT +
Preference number: 4 (lower is better)
Translates to: HGTVQGNPKEALQPCPYSLAYSK*LINMFS
Trigger: ACTGAACATATTTATTAAGCACTTGCTGTAGGCCAA...GGAGTAGGGACAAGGCTGCAGGGCCTCTTTCGGGTTTCCTTGGACAGTGCCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp ATTGTCATTGTCTGGGTCTCACTTTCCTATTGGACTCTAAGTTCCATGAATCTGCTAGGCCCCCAGGACTaGAGGGAAGTCACCCCATAC +
Preference number: 4 (lower is better)
Translates to: IVIVWVSLSYWTLSSMNLLGPQD*REVTPY
Trigger: GTATGGGGTGACTTCCCTGCAGTCCTGGGGGCCTAG...CAGATTCATGGAACTTAGAGTCCAATAGGAAAGTGAGACCCAGACAATGACAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp GGTCAGACAAGCAACCTTGTATTTCTCAGTCTTGGCTTACCAGTGCTGCTGACTCTGGCCATTTCCTCATaGCTTACCTGTTTTCCTCCC +
Preference number: 4 (lower is better)
Translates to: GQTSNLVFLSLGLPVLLTLAISS*LTCFPP
Trigger: GGGAGGAAAACAGGTAAGGCATGAGGAAATGGCCAG...AGTCAGCAGCACTGGTAAGCCAAGACTGAGAAATACAAGGTTGCTTGTCTGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp AGAGATGAGTTAGACCGTGTATACTGCACATGCCAGGACAACATGGGAGGATGTAACCTCCCTAAAAGGTaGAACAGCACTGAGCTGACC +
Preference number: 4 (lower is better)
Translates to: RDELDRVYCTCQDNMGGCNLPKR*NSTELT
Trigger: GGTCAGCTCAGTGCTGTTCCACCTTTTAGGGAGGTT...ACATCCTCCCATGTTGTCCTGGCATGTGCAGTATACACGGTCTAACTCATCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp ACCAGTGCTGCTGACTTTGCCGTGAGCATTTTACTCCTCATTCTCCCATCCTGGTGTATTTCTCAGTCTTaGCTTACCAGTGCTGCTGAC +
Preference number: 4 (lower is better)
Translates to: TSAADFAVSILLLILPSWCISQS*LTSAAD
Trigger: GTCAGCAGCACTGGTAAGCCAAGACTGAGAAATACA...CCAGGATGGGAGAATGAGGAGTAAAATGCTCACGGCAAAGTCAGCAGCACTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000247291.8
ENST00000372298.1
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp TCCTGTCCACTTAAGGTGTTGCAAAGGCTCTGCCAAGACTCTCACCCAGTCTTGTGTATTTCTCAGTCTTaGCTTACCAGTGCTGCTGAC +
Preference number: 4 (lower is better)
Translates to: SCPLKVLQRLCQDSHPVLCISQS*LTSAAD
Trigger: GTCAGCAGCACTGGTAAGCCAAGACTGAGAAATACA...CAAGACTGGGTGAGAGTCTTGGCAGAGCCTTTGCAACACCTTAAGTGGACAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp AACCCGAAAGAGGCCCTGCAGCCTTGTCCCTACTCCAAGGTCTTCTCAGAGTGGGTCTCACTTTCCTATTaGACTCTAAGTTCCATGAAT +
Preference number: 4 (lower is better)
Translates to: NPKEALQPCPYSKVFSEWVSLSY*TLSSMN
Trigger: ATTCATGGAACTTAGAGTCCAATAGGAAAGTGAGAC...CCACTCTGAGAAGACCTTGGAGTAGGGACAAGGCTGCAGGGCCTCTTTCGGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp ACCAGTCTCCTCACCTGTGAAATGAGAAGTCTGGCCCAGCTACCCTCCAGGGTGGTCTCACTTTCCTATTaGACTCTAAGTTCCATGAAT +
Preference number: 4 (lower is better)
Translates to: TSLLTCEMRSLAQLPSRVVSLSY*TLSSMN
Trigger: ATTCATGGAACTTAGAGTCCAATAGGAAAGTGAGAC...CACCCTGGAGGGTAGCTGGGCCAGACTTCTCATTTCACAGGTGAGGAGACTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp GCTGACTTGAAGGCATGGGAGAGGGCGAATCCTGGACCAGGGTCTTCAGAGCAAGTCTCACTTTCCTATTaGACTCTAAGTTCCATGAAT +
Preference number: 4 (lower is better)
Translates to: ADLKAWERANPGPGSSEQVSLSY*TLSSMN
Trigger: ATTCATGGAACTTAGAGTCCAATAGGAAAGTGAGAC...TTGCTCTGAAGACCCTGGTCCAGGATTCGCCCTCTCCCATGCCTTCAAGTCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp TTTCAAGCAGATTGGGGTCAGACAAGCAACCTTGTATTTCTCAGTCTTGGCTTAGCAGGGAACCCACGTTaGCTCCAACCACCAAGACCT +
Preference number: 4 (lower is better)
Translates to: FQADWGQTSNLVFLSLGLAGNPR*LQPPRP
Trigger: AGGTCTTGGTGGTTGGAGCCAACGTGGGTTCCCTGC...TAAGCCAAGACTGAGAAATACAAGGTTGCTTGTCTGACCCCAATCTGCTTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp CAAACCCTCAATGACCAAACAAATGAGAGAGAGAGAGATCACAGTGTGTCAAGAGCAGGGAACCCACGTTaGCTCCAACCACCAAGACCT +
Preference number: 4 (lower is better)
Translates to: QTLNDQTNERERDHSVSRAGNPR*LQPPRP
Trigger: AGGTCTTGGTGGTTGGAGCCAACGTGGGTTCCCTGC...TCTTGACACACTGTGATCTCTCTCTCTCTCATTTGTTTGGTCATTGAGGGTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp ATTGGGGTCAGACAAGCAACCTTGTATTTCTCAGTCTTGGCTTACCAGTGCTGCGGACAAAGCCATACTTaGCAGTCCTCACGTTACTGG +
Preference number: 4 (lower is better)
Translates to: IGVRQATLYFSVLAYQCCGQSHT*QSSRYW
Trigger: CCAGTAACGTGAGGACTGCCAAGTATGGCTTTGTCC...GCAGCACTGGTAAGCCAAGACTGAGAAATACAAGGTTGCTTGTCTGACCCCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp AAACCCTCAATGACCAAACAAATGAGAGAGAGAGAGATCACAGTGTGTCAAGAAAGAAGAGGTGTGGAATaGGTGGGGATCAGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: KPSMTKQMREREITVCQERRGVE*VGISWG
Trigger: GCCCCAGCTGATCCCCACTCATTCCACACCTCTTCT...TTCTTGACACACTGTGATCTCTCTCTCTCTCATTTGTTTGGTCATTGAGGGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp AAGCAGAGTCAGGTTTCAAGCAGATTGGGGTCAGACAAGCAACCTTGTATTTCTAAGGTGGAACAGCACTaGGCTGACCTTTCCCCCAAA +
Preference number: 4 (lower is better)
Translates to: KQSQVSSRLGSDKQPCISKVEQH*ADLSPK
Trigger: TTTGGGGGAAAGGTCAGCTCAGTGCTGTTCCACCTT...AGAAATACAAGGTTGCTTGTCTGACCCCAATCTGCTTGAAACCTGACTCTGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp GGTTTCAAGCAGATTGGGGTCAGACAAGCAACCTTGTATTTCTCAGTCTTGGCTGCTTACCAGTGCTGCTaGCTTTGCCGTGAGCATTTT +
Preference number: 4 (lower is better)
Translates to: GFKQIGVRQATLYFSVLAAYQCC*LCREHF
Trigger: AAAATGCTCACGGCAAAGTCAGCAGCACTGGTAAGC...AGCCAAGACTGAGAAATACAAGGTTGCTTGTCTGACCCCAATCTGCTTGAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000247291.8
ENST00000372298.1
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp CCCTCAATGACCAAACAAATGAGAGAGAGAGAGATCACAGTGTGTCAAGAAGGGGCTTACCAGTGCTGCTaGCTTTGCCGTGAGCATTTT +
Preference number: 4 (lower is better)
Translates to: PSMTKQMREREITVCQEGAYQCC*LCREHF
Trigger: AAAATGCTCACGGCAAAGTCAGCAGCACTGGTAAGC...CCCTTCTTGACACACTGTGATCTCTCTCTCTCTCATTTGTTTGGTCATTGAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp ATTGGGGTCAGACAAGCAACCTTGTATTTCTCAGTCTTGGCTTACCAGTGCTGCAGATCTGGGGAGAGATaGGTTAGACCGTGTATACTG +
Preference number: 4 (lower is better)
Translates to: IGVRQATLYFSVLAYQCCRSGER*VRPCIL
Trigger: CAGTATACACGGTCTAACTCATCTCTCCCCAGATCT...GCAGCACTGGTAAGCCAAGACTGAGAAATACAAGGTTGCTTGTCTGACCCCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000247291.8
ENST00000372298.1
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp GGTCAGACAAGCAACCTTGTATTTCTCAGTCTTGGCTTACCAGTGCTGCTGACTAGATCTGGGGAGAGATaGGTTAGACCGTGTATACTG +
Preference number: 4 (lower is better)
Translates to: GQTSNLVFLSLGLPVLLTRSGER*VRPCIL
Trigger: CAGTATACACGGTCTAACTCATCTCTCCCCAGATCT...AGTCAGCAGCACTGGTAAGCCAAGACTGAGAAATACAAGGTTGCTTGTCTGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000247291.8
ENST00000372298.1
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp ATGACCAAACAAATGAGAGAGAGAGAGATCACAGTGTGTCAAGAAGGGCAGCAATCCTCACCTGTGAAATaGGAAGTCTGGCCCAGCTAC +
Preference number: 4 (lower is better)
Translates to: MTKQMREREITVCQEGQQSSPVK*EVWPSY
Trigger: GTAGCTGGGCCAGACTTCTCATTTCACAGGTGAGGA...TTGCTGCCCTTCTTGACACACTGTGATCTCTCTCTCTCTCATTTGTTTGGTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp AAGATCAGCCAGTCATGGCCAAATAACCTCATTCCTGAACTGGTTGAAACCAGTACCCTCTCCAAGTGTTaGCCTTGGAGGCTGTCTCTT +
Preference number: 4 (lower is better)
Translates to: KISQSWPNNLIPELVETSTLSKC*PWRLSL
Trigger: AAGAGACAGCCTCCAAGGTCAACACTTGGAGAGGGT...ACTGGTTTCAACCAGTTCAGGAATGAGGTTATTTGGCCATGACTGGCTGATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp AAGCAGAGTCAGGTTTCAAGCAGATTGGGGTCAGACAAGCAACCTTGTATTTCTACCCTCTCCAAGTGTTaGCCTTGGAGGCTGTCTCTT +
Preference number: 4 (lower is better)
Translates to: KQSQVSSRLGSDKQPCISTLSKC*PWRLSL
Trigger: AAGAGACAGCCTCCAAGGTCAACACTTGGAGAGGGT...AGAAATACAAGGTTGCTTGTCTGACCCCAATCTGCTTGAAACCTGACTCTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp CCATACCTCCCCCTTCCTAACATTTATCTCATTGTCATTGTCTGGGTCTCACTTACCCTCTCCAAGTGTTaGCCTTGGAGGCTGTCTCTT +
Preference number: 4 (lower is better)
Translates to: PYLPLPNIYLIVIVWVSLTLSKC*PWRLSL
Trigger: AAGAGACAGCCTCCAAGGTCAACACTTGGAGAGGGT...AAGTGAGACCCAGACAATGACAATGAGATAAATGTTAGGAAGGGGGAGGTATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp CCATACCTCCCCCTTCCTAACATTTATCTCATTGTCATTGTCTGGGTCTCACTTATCTGCTATCAGAGGTaGCTAAGGAGCCGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: PYLPLPNIYLIVIVWVSLICYQR*LRSRRE
Trigger: TTCCCTGCGGCTCCTTAGTCACCTCTGATAGCAGAT...AAGTGAGACCCAGACAATGACAATGAGATAAATGTTAGGAAGGGGGAGGTATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp AGGTCAAACTCCATGTACTTCTCTTTGAAGGCTGTGAGCTTTTCTGGAAGGTTCGCCTTCCTCTCTGAGTaGGGAACAGGGACACTGAAT +
Preference number: 4 (lower is better)
Translates to: RSNSMYFSLKAVSFSGRFAFLSE*GTGTLN
Trigger: ATTCAGTGTCCCTGTTCCTCACTCAGAGAGGAAGGC...GAACCTTCCAGAAAAGCTCACAGCCTTCAAAGAGAAGTACATGGAGTTTGACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372314.3
CDS-3UTR TCA 90 bp ATTCCCCGACCCAGAGCCCCTTTAAGGCAGATAATTTGTGCTTTACAAAGACATCGACAAACCCTCCTCTaGGTCATAGGGACAAAGCCA +
Preference number: 4 (lower is better)
Translates to: IPRPRAPLRQIICALQRHRQTLL*VIGTKP
Trigger: TGGCTTTGTCCCTATGACTCAGAGGAGGGTTTGTCG...ATGTCTTTGTAAAGCACAAATTATCTGCCTTAAAGGGGCTCTGGGTCGGGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp CTAAAATCCTGCGAGTCCATAAGAAAGGACACAGGTGACCCCAGTTCAATTCCCCATACTTCATCCACCTaGATTTGCCCGACAAACCCT +
Preference number: 4 (lower is better)
Translates to: LKSCESIRKDTGDPSSIPHTSST*ICPTNP
Trigger: AGGGTTTGTCGGGCAAATTCAGGTGGATGAAGTATG...GGGAATTGAACTGGGGTCACCTGTGTCCTTTCTTATGGACTCGCAGGATTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp AAGGTTCTGAGAGATCTGGGGAGAGATGAGTTAGACCGTGTATACTGCACATGCCATACTTCATCCACCTaGATTTGCCCGACAAACCCT +
Preference number: 4 (lower is better)
Translates to: KVLRDLGRDELDRVYCTCHTSST*ICPTNP
Trigger: AGGGTTTGTCGGGCAAATTCAGGTGGATGAAGTATG...GCATGTGCAGTATACACGGTCTAACTCATCTCTCCCCAGATCTCTCAGAACCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp GGTCAGACAAGCAACCTTGTATTTCTCAGTCTTGGCTTACCAGTGCTGCTGACTTTCCTTCAAACATCATaGCTCCCTCCTGTCACCTCT +
Preference number: 4 (lower is better)
Translates to: GQTSNLVFLSLGLPVLLTFLQTS*LPPVTS
Trigger: AGAGGTGACAGGAGGGAGTCATGATGTTTGAAGGAA...AGTCAGCAGCACTGGTAAGCCAAGACTGAGAAATACAAGGTTGCTTGTCTGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372300.5
CDS-3UTR GCA 90 bp AGCAGATTGGGGTCAGACAAGCAACCTTGTATTTCTCAGTCTTGGCTTACCAGTCGTGTATACTGCACATaGCAGGACAACATGGGAGGA +
Preference number: 4 (lower is better)
Translates to: SRLGSDKQPCISQSWLTSRVYCT*QDNMGG
Trigger: TCCTCCCATGTTGTCCTGGCATGTGCAGTATACACG...ACTGGTAAGCCAAGACTGAGAAATACAAGGTTGCTTGTCTGACCCCAATCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000247291.8
ENST00000372298.1
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp TGCACATGCCAGGACAACATGGGAGGATGTAAAGCTTATAATAGCAGGTCAATACAGAGGCCTGGTCTTTaGCCTAAGCCTGATGCTGAC +
Preference number: 4 (lower is better)
Translates to: CTCQDNMGGCKAYNSRSIQRPGL*PKPDAD
Trigger: GTCAGCATCAGGCTTAGGGCAAAGACCAGGCCTCTG...TATTGACCTGCTATTATAAGCTTTACATCCTCCCATGTTGTCCTGGCATGTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp TGGCACTGTCCAAGGAAACCCGAAAGAGGCCCTGCAGCCTTGTCCCTACTCCAATTGGCCTACAGCAAGTaGTTAATAAATATGTTCAGT +
Preference number: 4 (lower is better)
Translates to: WHCPRKPERGPAALSLLQLAYSK*LINMFS
Trigger: ACTGAACATATTTATTAAGCACTTGCTGTAGGCCAA...TTGGAGTAGGGACAAGGCTGCAGGGCCTCTTTCGGGTTTCCTTGGACAGTGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp AATGACCAAACAAATGAGAGAGAGAGAGATCACAGTGTGTCAAGAAGGGCAGCAGTGTTGCAAAGGCTCTaGCAAGACTCTCACCCAGTC +
Preference number: 4 (lower is better)
Translates to: NDQTNERERDHSVSRRAAVLQRL*QDSHPV
Trigger: GACTGGGTGAGAGTCTTGGCAGAGCCTTTGCAACAC...TGCTGCCCTTCTTGACACACTGTGATCTCTCTCTCTCTCATTTGTTTGGTCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp ACCCTCAATGACCAAACAAATGAGAGAGAGAGAGATCACAGTGTGTCAAGAAGGGTGTTGCAAAGGCTCTaGCAAGACTCTCACCCAGTC +
Preference number: 4 (lower is better)
Translates to: TLNDQTNERERDHSVSRRVLQRL*QDSHPV
Trigger: GACTGGGTGAGAGTCTTGGCAGAGCCTTTGCAACAC...CCTTCTTGACACACTGTGATCTCTCTCTCTCTCATTTGTTTGGTCATTGAGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp CTAAAATCCTGCGAGTCCATAAGAAAGGACACAGGTGACCCCAGTTCAATTCCCGTCCACTTAAGGTGTTaGAAAGGCTCTGCCAAGACT +
Preference number: 4 (lower is better)
Translates to: LKSCESIRKDTGDPSSIPVHLRC*KGSAKT
Trigger: AGTCTTGGCAGAGCCTTTGCAACACCTTAAGTGGAC...GGGAATTGAACTGGGGTCACCTGTGTCCTTTCTTATGGACTCGCAGGATTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp ACCAGTGCTGCTGACTTTGCCGTGAGCATTTTACTCCTCATTCTCCCATCCTGGCTTAAGGAGAATTCCTaGAGTCTTGTAGAACTGTGG +
Preference number: 4 (lower is better)
Translates to: TSAADFAVSILLLILPSWLKENS*SLVELW
Trigger: CCACAGTTCTACAAGACTGCAGGAATTCTCCTTAAG...CCAGGATGGGAGAATGAGGAGTAAAATGCTCACGGCAAAGTCAGCAGCACTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp AAGCAGATTGGGGTCAGACAAGCAACCTTGTATTTCTCAGTCTTGGCTTACCAGGAAAACCCTCTCTTCTaGCATTTCCAGAAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: KQIGVRQATLYFSVLAYQENPLF*HFQKLG
Trigger: CCCCAGCTTCTGGAAATGGCAGAAGAGAGGGTTTTC...CTGGTAAGCCAAGACTGAGAAATACAAGGTTGCTTGTCTGACCCCAATCTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp AATGACCAAACAAATGAGAGAGAGAGAGATCACAGTGTGTCAAGAAGGGCAGCATATCGGGTAACCAGGTaGGACCAGACCCAGTTTGTC +
Preference number: 4 (lower is better)
Translates to: NDQTNERERDHSVSRRAAYRVTR*DQTQFV
Trigger: GACAAACTGGGTCTGGTCGCACCTGGTTACCCGATA...TGCTGCCCTTCTTGACACACTGTGATCTCTCTCTCTCTCATTTGTTTGGTCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372301.2
CDS-3UTR CCA 90 bp CAAACCCTCAATGACCAAACAAATGAGAGAGAGAGAGATCACAGTGTGTCAAGAAACGCCTTCCCTCCTTaGAACCTGTTGCTGAGCTCG +
Preference number: 4 (lower is better)
Translates to: QTLNDQTNERERDHSVSRNAFPP*NLLLSS
Trigger: CGAGCTCAGCAACAGGTTCCAAGGAGGGAAGGCGTT...TCTTGACACACTGTGATCTCTCTCTCTCTCATTTGTTTGGTCATTGAGGGTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
CDS-3UTR CCA 90 bp TCAATGACCAAACAAATGAGAGAGAGAGAGATCACAGTGTGTCAAGAAGGGCAGAAGGATGGAGAGTGCTaGTTCCTCCAAGTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: SMTKQMREREITVCQEGQKDGEC*FLQVRG
Trigger: TCCCCTCACTTGGAGGAACCAGCACTCTCCATCCTT...CTGCCCTTCTTGACACACTGTGATCTCTCTCTCTCTCATTTGTTTGGTCATTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp AAGATCAGCCAGTCATGGCCAAATAACCTCATTCCTGAACTGGTTGAAACCAGTAAGGATGGAGAGTGCTaGTTCCTCCAAGTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: KISQSWPNNLIPELVETSKDGEC*FLQVRG
Trigger: TCCCCTCACTTGGAGGAACCAGCACTCTCCATCCTT...ACTGGTTTCAACCAGTTCAGGAATGAGGTTATTTGGCCATGACTGGCTGATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp TCCTGTCCACTTAAGGTGTTGCAAAGGCTCTGCCAAGACTCTCACCCAGTCTTGCATGCCAGGACAACATaGGAGGATGTAAAGCTTATA +
Preference number: 4 (lower is better)
Translates to: SCPLKVLQRLCQDSHPVLHARTT*EDVKLI
Trigger: TATAAGCTTTACATCCTCCCATGTTGTCCTGGCATG...CAAGACTGGGTGAGAGTCTTGGCAGAGCCTTTGCAACACCTTAAGTGGACAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp GGACCCAAGGCTCAGGATTCCCCGACCCAGAGCCCCTTTAAGGCAGATAATTTGGTCTCACTTTCCTATTaGACTCTAAGTTCCATGAAT +
Preference number: 4 (lower is better)
Translates to: GPKAQDSPTQSPFKADNLVSLSY*TLSSMN
Trigger: ATTCATGGAACTTAGAGTCCAATAGGAAAGTGAGAC...CAAATTATCTGCCTTAAAGGGGCTCTGGGTCGGGGAATCCTGAGCCTTGGGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp GATTGGGGTCAGACAAGCAACCTTGTATTTCTCAGTCTTGGCTTACCAGTGCTGTGGGTTAACCCAACCTaGCCATTTCCTCATGCCTTA +
Preference number: 4 (lower is better)
Translates to: DWGQTSNLVFLSLGLPVLWVNPT*PFPHAL
Trigger: TAAGGCATGAGGAAATGGCCAGGTTGGGTTAACCCA...CAGCACTGGTAAGCCAAGACTGAGAAATACAAGGTTGCTTGTCTGACCCCAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp ACCCTCAATGACCAAACAAATGAGAGAGAGAGAGATCACAGTGTGTCAAGAAGGCCCTCCTGTCACCTCTaGGATCATCTTCTTCATCTC +
Preference number: 4 (lower is better)
Translates to: TLNDQTNERERDHSVSRRPSCHL*DHLLHL
Trigger: GAGATGAAGAAGATGATCTCAGAGGTGACAGGAGGG...CCTTCTTGACACACTGTGATCTCTCTCTCTCTCATTTGTTTGGTCATTGAGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372301.2
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp AAGCAGATTGGGGTCAGACAAGCAACCTTGTATTTCTCAGTCTTGGCTTACCAGCTGCTGACTTTGCCGTaGGCATTTTACTCCTCATTC +
Preference number: 4 (lower is better)
Translates to: KQIGVRQATLYFSVLAYQLLTLP*AFYSSF
Trigger: GAATGAGGAGTAAAATGCTCACGGCAAAGTCAGCAG...CTGGTAAGCCAAGACTGAGAAATACAAGGTTGCTTGTCTGACCCCAATCTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000247291.8
ENST00000372298.1
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp TCCTCCCTTAAGGAGAATTCCTGCAGTCTTGTAGAACTGTGGAACTTACTGAAAACCCTCTCCAAGTGTTaGCCTTGGAGGCTGTCTCTT +
Preference number: 4 (lower is better)
Translates to: SSLKENSCSLVELWNLLKTLSKC*PWRLSL
Trigger: AAGAGACAGCCTCCAAGGTCAACACTTGGAGAGGGT...TTTCAGTAAGTTCCACAGTTCTACAAGACTGCAGGAATTCTCCTTAAGGGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp TTCCTGCAGTCTTGTAGAACTGTGGAACTTACTGAAATAAGCCTGACTGGTTCTATCTGCTATCAGAGGTaGCTAAGGAGCCGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: FLQSCRTVELTEISLTGSICYQR*LRSRRE
Trigger: TTCCCTGCGGCTCCTTAGTCACCTCTGATAGCAGAT...AGAACCAGTCAGGCTTATTTCAGTAAGTTCCACAGTTCTACAAGACTGCAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp GCAGAGTCAGGTTTCAAGCAGATTGGGGTCAGACAAGCAACCTTGTATTTCTCATTTGAAGCAGATCCTTaGGCTCAAGATCAGCCAGTC +
Preference number: 4 (lower is better)
Translates to: AESGFKQIGVRQATLYFSFEADP*AQDQPV
Trigger: GACTGGCTGATCTTGAGCTCAAGGATCTGCTTCAAA...TGAGAAATACAAGGTTGCTTGTCTGACCCCAATCTGCTTGAAACCTGACTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp TGCACATGCCAGGACAACATGGGAGGATGTAAAGCTTATAATAGCAGGTCAATACCCACCCCCATTCAATaGGAAAACCCTCTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: CTCQDNMGGCKAYNSRSIPTPIQ*ENPLFC
Trigger: GCAGAAGAGAGGGTTTTCTCATTGAATGGGGGTGGG...TATTGACCTGCTATTATAAGCTTTACATCCTCCCATGTTGTCCTGGCATGTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp CAAACCCTCAATGACCAAACAAATGAGAGAGAGAGAGATCACAGTGTGTCAAGACCAAGAGCCACAACCTaGAATAGATGCAGACTGCCC +
Preference number: 4 (lower is better)
Translates to: QTLNDQTNERERDHSVSRPRATT*NRCRLP
Trigger: GGGCAGTCTGCATCTATTTCAGGTTGTGGCTCTTGG...TCTTGACACACTGTGATCTCTCTCTCTCTCATTTGTTTGGTCATTGAGGGTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp TATACTGCACATGCCAGGACAACATGGGAGGATGTAAAGCTTATAATAGCAGGTCGACAAACCCTCCTCTaGGTCATAGGGACAAAGCCA +
Preference number: 4 (lower is better)
Translates to: YTAHARTTWEDVKLIIAGRQTLL*VIGTKP
Trigger: TGGCTTTGTCCCTATGACTCAGAGGAGGGTTTGTCG...ACCTGCTATTATAAGCTTTACATCCTCCCATGTTGTCCTGGCATGTGCAGTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp TCAATGACCAAACAAATGAGAGAGAGAGAGATCACAGTGTGTCAAGAAGGGCAGAAACTCCTACAGAGGTaGGAGGACAGTGCTGAGCAA +
Preference number: 4 (lower is better)
Translates to: SMTKQMREREITVCQEGQKLLQR*EDSAEQ
Trigger: TTGCTCAGCACTGTCCTCTCACCTCTGTAGGAGTTT...CTGCCCTTCTTGACACACTGTGATCTCTCTCTCTCTCATTTGTTTGGTCATTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372301.2
CDS-3UTR GCA 90 bp CAAACCCTCAATGACCAAACAAATGAGAGAGAGAGAGATCACAGTGTGTCAAGATTGAAGGGCTCCCAATaGCAAGCTCCTTTCCTTCCC +
Preference number: 4 (lower is better)
Translates to: QTLNDQTNERERDHSVSRLKGSQ*QAPFLP
Trigger: GGGAAGGAAAGGAGCTTGGCATTGGGAGCCCTTCAA...TCTTGACACACTGTGATCTCTCTCTCTCTCATTTGTTTGGTCATTGAGGGTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp AATGTTTTGCTGGGGTTTAAACTTCAACTAGGCCTGTGTGCATTTGAAGCAGATCAGAGGCCTGGTCTTTaGCCTAAGCCTGATGCTGAC +
Preference number: 4 (lower is better)
Translates to: NVLLGFKLQLGLCAFEADQRPGL*PKPDAD
Trigger: GTCAGCATCAGGCTTAGGGCAAAGACCAGGCCTCTG...ATCTGCTTCAAATGCACACAGGCCTAGTTGAAGTTTAAACCCCAGCAAAACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp GGACCCAAGGCTCAGGATTCCCCGACCCAGAGCCCCTTTAAGGCAGATAATTTGTTGGCCTACAGCAAGTaGTTAATAAATATGTTCAGT +
Preference number: 4 (lower is better)
Translates to: GPKAQDSPTQSPFKADNLLAYSK*LINMFS
Trigger: ACTGAACATATTTATTAAGCACTTGCTGTAGGCCAA...CAAATTATCTGCCTTAAAGGGGCTCTGGGTCGGGGAATCCTGAGCCTTGGGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp TTCCTGCAGTCTTGTAGAACTGTGGAACTTACTGAAATAAGCCTGACTGGTTCTGTGTTGCAAAGGCTCTaGCAAGACTCTCACCCAGTC +
Preference number: 4 (lower is better)
Translates to: FLQSCRTVELTEISLTGSVLQRL*QDSHPV
Trigger: GACTGGGTGAGAGTCTTGGCAGAGCCTTTGCAACAC...AGAACCAGTCAGGCTTATTTCAGTAAGTTCCACAGTTCTACAAGACTGCAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp AATGACCAAACAAATGAGAGAGAGAGAGATCACAGTGTGTCAAGAAGGGCAGCACTGGCCATTTCCTCATaGCTTACCTGTTTTCCTCCC +
Preference number: 4 (lower is better)
Translates to: NDQTNERERDHSVSRRAALAISS*LTCFPP
Trigger: GGGAGGAAAACAGGTAAGGCATGAGGAAATGGCCAG...TGCTGCCCTTCTTGACACACTGTGATCTCTCTCTCTCTCATTTGTTTGGTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp CTCAGTAACCTCCCTAAAAGGTGGAACAGCACTGAGCTGACCTTTCCCCCAAAACAGGGAGGAATGTTTTaGTGGGGTTTAAACTTCAAC +
Preference number: 4 (lower is better)
Translates to: LSNLPKRWNSTELTFPPKQGGMF*WGLNFN
Trigger: GTTGAAGTTTAAACCCCAGCAAAACATTCCTCCCTG...TTTTGGGGGAAAGGTCAGCTCAGTGCTGTTCCACCTTTTAGGGAGGTTACTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp GACTGCAGGGAAGTCACCCCATACCTCCCCCTTCCTAACATTTATCTCATTGTCCTTAAGGAGAATTCCTaGAGTCTTGTAGAACTGTGG +
Preference number: 4 (lower is better)
Translates to: DCREVTPYLPLPNIYLIVLKENS*SLVELW
Trigger: CCACAGTTCTACAAGACTGCAGGAATTCTCCTTAAG...GACAATGAGATAAATGTTAGGAAGGGGGAGGTATGGGGTGACTTCCCTGCAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp CATTTATCTCATTGTCATTGTCTGGGTCTCACTTTCCTATTGGACTCTAAGTTCAGCTGGGGCCACACCTaGTTGCTCTCCTCCCTTAAG +
Preference number: 4 (lower is better)
Translates to: HLSHCHCLGLTFLLDSKFSWGHT*LLSSLK
Trigger: CTTAAGGGAGGAGAGCAAGCAGGTGTGGCCCCAGCT...GAACTTAGAGTCCAATAGGAAAGTGAGACCCAGACAATGACAATGAGATAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp CAAACCCTCAATGACCAAACAAATGAGAGAGAGAGAGATCACAGTGTGTCAAGAAAGGATGGAGAGTGCTaGTTCCTCCAAGTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: QTLNDQTNERERDHSVSRKDGEC*FLQVRG
Trigger: TCCCCTCACTTGGAGGAACCAGCACTCTCCATCCTT...TCTTGACACACTGTGATCTCTCTCTCTCTCATTTGTTTGGTCATTGAGGGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp AATGTTTTGCTGGGGTTTAAACTTCAACTAGGCCTGTGTGCATTTGAAGCAGATGTGACACCAGAGCACTaGAGCCATGGCACTGTCCAA +
Preference number: 4 (lower is better)
Translates to: NVLLGFKLQLGLCAFEADVTPEH*SHGTVQ
Trigger: TTGGACAGTGCCATGGCTCCAGTGCTCTGGTGTCAC...ATCTGCTTCAAATGCACACAGGCCTAGTTGAAGTTTAAACCCCAGCAAAACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp AATGACCAAACAAATGAGAGAGAGAGAGATCACAGTGTGTCAAGAAGGGCAGCAAACCTCCCTAAAAGGTaGAACAGCACTGAGCTGACC +
Preference number: 4 (lower is better)
Translates to: NDQTNERERDHSVSRRAANLPKR*NSTELT
Trigger: GGTCAGCTCAGTGCTGTTCCACCTTTTAGGGAGGTT...TGCTGCCCTTCTTGACACACTGTGATCTCTCTCTCTCTCATTTGTTTGGTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp TCAATGACCAAACAAATGAGAGAGAGAGAGATCACAGTGTGTCAAGAAGGGCAGAACCTCCCTAAAAGGTaGAACAGCACTGAGCTGACC +
Preference number: 4 (lower is better)
Translates to: SMTKQMREREITVCQEGQNLPKR*NSTELT
Trigger: GGTCAGCTCAGTGCTGTTCCACCTTTTAGGGAGGTT...CTGCCCTTCTTGACACACTGTGATCTCTCTCTCTCTCATTTGTTTGGTCATTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp CATTTATCTCATTGTCATTGTCTGGGTCTCACTTTCCTATTGGACTCTAAGTTCGGAGAGGGCGAATCCTaGACCAGGGTCTTCAGAGCA +
Preference number: 4 (lower is better)
Translates to: HLSHCHCLGLTFLLDSKFGEGES*TRVFRA
Trigger: TGCTCTGAAGACCCTGGTCCAGGATTCGCCCTCTCC...GAACTTAGAGTCCAATAGGAAAGTGAGACCCAGACAATGACAATGAGATAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp CAACCACCAAGACCTCCCAGTCCTGTCCACTTAAGGTGTTGCAAAGGCTCTGCCTGTCCATTTCATTATTaGATTCTTAACTGTTGGCCT +
Preference number: 4 (lower is better)
Translates to: QPPRPPSPVHLRCCKGSACPFHY*ILNCWP
Trigger: AGGCCAACAGTTAAGAATCCAATAATGAAATGGACA...GGCAGAGCCTTTGCAACACCTTAAGTGGACAGGACTGGGAGGTCTTGGTGGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp CCTCTGAGTCATAGGGACAAAGCCATACTTGGCAGTCCTCACGTTACTGGTTACAAGATCAGCCAGTCATaGCCAAATAACCTCATTCCT +
Preference number: 4 (lower is better)
Translates to: PLSHRDKAILGSPHVTGYKISQS*PNNLIP
Trigger: AGGAATGAGGTTATTTGGCCATGACTGGCTGATCTT...GTAACCAGTAACGTGAGGACTGCCAAGTATGGCTTTGTCCCTATGACTCAGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp GACTGCAGGGAAGTCACCCCATACCTCCCCCTTCCTAACATTTATCTCATTGTCAAGATCAGCCAGTCATaGCCAAATAACCTCATTCCT +
Preference number: 4 (lower is better)
Translates to: DCREVTPYLPLPNIYLIVKISQS*PNNLIP
Trigger: AGGAATGAGGTTATTTGGCCATGACTGGCTGATCTT...GACAATGAGATAAATGTTAGGAAGGGGGAGGTATGGGGTGACTTCCCTGCAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp ATTGTCATTGTCTGGGTCTCACTTTCCTATTGGACTCTAAGTTCCATGAATCTGTCCTCACCTGTGAAATaGGAAGTCTGGCCCAGCTAC +
Preference number: 4 (lower is better)
Translates to: IVIVWVSLSYWTLSSMNLSSPVK*EVWPSY
Trigger: GTAGCTGGGCCAGACTTCTCATTTCACAGGTGAGGA...CAGATTCATGGAACTTAGAGTCCAATAGGAAAGTGAGACCCAGACAATGACAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp ATTGTCATTGTCTGGGTCTCACTTTCCTATTGGACTCTAAGTTCCATGAATCTGCAGTCTCCTCACCTGTaGAATGAGAAGTCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: IVIVWVSLSYWTLSSMNLQSPHL*NEKSGP
Trigger: TGGGCCAGACTTCTCATTTCACAGGTGAGGAGACTG...CAGATTCATGGAACTTAGAGTCCAATAGGAAAGTGAGACCCAGACAATGACAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp TTCCTGCAGTCTTGTAGAACTGTGGAACTTACTGAAATAAGCCTGACTGGTTCTAGGCCTGTGTGCATTTaGAGCAGATCCTTGAGCTCA +
Preference number: 4 (lower is better)
Translates to: FLQSCRTVELTEISLTGSRPVCI*SRSLSS
Trigger: TGAGCTCAAGGATCTGCTTCAAATGCACACAGGCCT...AGAACCAGTCAGGCTTATTTCAGTAAGTTCCACAGTTCTACAAGACTGCAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp ATGACCAAACAAATGAGAGAGAGAGAGATCACAGTGTGTCAAGAAGGGCAGCAACATACTTCATCCACCTaGATTTGCCCGACAAACCCT +
Preference number: 4 (lower is better)
Translates to: MTKQMREREITVCQEGQQHTSST*ICPTNP
Trigger: AGGGTTTGTCGGGCAAATTCAGGTGGATGAAGTATG...TTGCTGCCCTTCTTGACACACTGTGATCTCTCTCTCTCTCATTTGTTTGGTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp ACCGTGTATACTGCACATGCCAGGACAACATGGGAGGATGTAAAGCTTATAATACGTGTATACTGCACATaGCAGGACAACATGGGAGGA +
Preference number: 4 (lower is better)
Translates to: TVYTAHARTTWEDVKLIIRVYCT*QDNMGG
Trigger: TCCTCCCATGTTGTCCTGGCATGTGCAGTATACACG...TATTATAAGCTTTACATCCTCCCATGTTGTCCTGGCATGTGCAGTATACACGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000247291.8
ENST00000372298.1
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp ATTGGGGTCAGACAAGCAACCTTGTATTTCTCAGTCTTGGCTTACCAGTGCTGCAGGGTTCTAAAATCCTaGGAGTCCATAAGAAAGGAC +
Preference number: 4 (lower is better)
Translates to: IGVRQATLYFSVLAYQCCRVLKS*ESIRKD
Trigger: GTCCTTTCTTATGGACTCGCAGGATTTTAGAACCCT...GCAGCACTGGTAAGCCAAGACTGAGAAATACAAGGTTGCTTGTCTGACCCCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000247291.8
ENST00000372298.1
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp ACATGCCAGGACAACATGGGAGGATGTAAAGCTTATAATAGCAGGTCAATAAATCAGAGGCCTGGTCTTTaGCCTAAGCCTGATGCTGAC +
Preference number: 4 (lower is better)
Translates to: TCQDNMGGCKAYNSRSINQRPGL*PKPDAD
Trigger: GTCAGCATCAGGCTTAGGGCAAAGACCAGGCCTCTG...ATTTATTGACCTGCTATTATAAGCTTTACATCCTCCCATGTTGTCCTGGCATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp CTCATTCCTGAACTGGTTGAAACCAGTGGGTTAACCCAACCTGGCCATTTCCTCACTTTGACATCTTCCTaGATGAATTACAAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: LIPELVETSGLTQPGHFLTLTSS*MNYKRQ
Trigger: CTGCCTCTTGTAATTCATGCAGGAAGATGTCAAAGT...GAGGAAATGGCCAGGTTGGGTTAACCCACTGGTTTCAACCAGTTCAGGAATGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp GACTGCAGGGAAGTCACCCCATACCTCCCCCTTCCTAACATTTATCTCATTGTCACTTTGACATCTTCCTaGATGAATTACAAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: DCREVTPYLPLPNIYLIVTLTSS*MNYKRQ
Trigger: CTGCCTCTTGTAATTCATGCAGGAAGATGTCAAAGT...GACAATGAGATAAATGTTAGGAAGGGGGAGGTATGGGGTGACTTCCCTGCAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp AATGACCAAACAAATGAGAGAGAGAGAGATCACAGTGTGTCAAGAAGGGCAGCAGTCCACTTAAGGTGTTaGAAAGGCTCTGCCAAGACT +
Preference number: 4 (lower is better)
Translates to: NDQTNERERDHSVSRRAAVHLRC*KGSAKT
Trigger: AGTCTTGGCAGAGCCTTTGCAACACCTTAAGTGGAC...TGCTGCCCTTCTTGACACACTGTGATCTCTCTCTCTCTCATTTGTTTGGTCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp ACCCTCAATGACCAAACAAATGAGAGAGAGAGAGATCACAGTGTGTCAAGAAGGGTCCACTTAAGGTGTTaGAAAGGCTCTGCCAAGACT +
Preference number: 4 (lower is better)
Translates to: TLNDQTNERERDHSVSRRVHLRC*KGSAKT
Trigger: AGTCTTGGCAGAGCCTTTGCAACACCTTAAGTGGAC...CCTTCTTGACACACTGTGATCTCTCTCTCTCTCATTTGTTTGGTCATTGAGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp ATGAGAGAAGCAGAGTCAGGTTTCAAGCAGATTGGGGTCAGACAAGCAACCTTGCAGGGAGGAATGTTTTaGTGGGGTTTAAACTTCAAC +
Preference number: 4 (lower is better)
Translates to: MREAESGFKQIGVRQATLQGGMF*WGLNFN
Trigger: GTTGAAGTTTAAACCCCAGCAAAACATTCCTCCCTG...CAAGGTTGCTTGTCTGACCCCAATCTGCTTGAAACCTGACTCTGCTTCTCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp TGCACATGCCAGGACAACATGGGAGGATGTAAAGCTTATAATAGCAGGTCAATAGAAAACCCTCTCTTCTaGCATTTCCAGAAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: CTCQDNMGGCKAYNSRSIENPLF*HFQKLG
Trigger: CCCCAGCTTCTGGAAATGGCAGAAGAGAGGGTTTTC...TATTGACCTGCTATTATAAGCTTTACATCCTCCCATGTTGTCCTGGCATGTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp CATTTATCTCATTGTCATTGTCTGGGTCTCACTTTCCTATTGGACTCTAAGTTCGCTGACTTGAAGGCATaGGAGAGGGCGAATCCTGGA +
Preference number: 4 (lower is better)
Translates to: HLSHCHCLGLTFLLDSKFADLKA*ERANPG
Trigger: TCCAGGATTCGCCCTCTCCCATGCCTTCAAGTCAGC...GAACTTAGAGTCCAATAGGAAAGTGAGACCCAGACAATGACAATGAGATAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp GACAAGCAACCTTGTATTTCTCAGTCTTGGCTTACCAGTGCTGCTGACTTTGCCCTCATTGTCATTGTCTaGGTCTCACTTTCCTATTGG +
Preference number: 4 (lower is better)
Translates to: DKQPCISQSWLTSAADFALIVIV*VSLSYW
Trigger: CCAATAGGAAAGTGAGACCCAGACAATGACAATGAG...GGCAAAGTCAGCAGCACTGGTAAGCCAAGACTGAGAAATACAAGGTTGCTTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp AAGCAGAGTCAGGTTTCAAGCAGATTGGGGTCAGACAAGCAACCTTGTATTTCTTGGGTTAACCCAACCTaGCCATTTCCTCATGCCTTA +
Preference number: 4 (lower is better)
Translates to: KQSQVSSRLGSDKQPCISWVNPT*PFPHAL
Trigger: TAAGGCATGAGGAAATGGCCAGGTTGGGTTAACCCA...AGAAATACAAGGTTGCTTGTCTGACCCCAATCTGCTTGAAACCTGACTCTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp AATGACCAAACAAATGAGAGAGAGAGAGATCACAGTGTGTCAAGAAGGGCAGCATGGGTTAACCCAACCTaGCCATTTCCTCATGCCTTA +
Preference number: 4 (lower is better)
Translates to: NDQTNERERDHSVSRRAAWVNPT*PFPHAL
Trigger: TAAGGCATGAGGAAATGGCCAGGTTGGGTTAACCCA...TGCTGCCCTTCTTGACACACTGTGATCTCTCTCTCTCTCATTTGTTTGGTCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp GCAGATTGGGGTCAGACAAGCAACCTTGTATTTCTCAGTCTTGGCTTACCAGTGAAGATCAGCCAGTCATaGCCAAATAACCTCATTCCT +
Preference number: 4 (lower is better)
Translates to: ADWGQTSNLVFLSLGLPVKISQS*PNNLIP
Trigger: AGGAATGAGGTTATTTGGCCATGACTGGCTGATCTT...CACTGGTAAGCCAAGACTGAGAAATACAAGGTTGCTTGTCTGACCCCAATCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR CAA 72 bp TCACCCCATACCTCCCCCTTCCTAACATTTATCTCATaGTCATTGTCTGGGTCTCACTTTCCTATTGGACTC +
Preference number: 4 (lower is better)
Translates to: SPHTSPFLTFIS*SLSGSHFPIGL
Trigger: GAGTCCAATAGGAAAGTGAGACCCAGACAATGACAATGAGATAAATGTTAGGAAGGGGGAGGTATGGGGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp AAACCCTCAATGACCAAACAAATGAGAGAGAGAGAGATCACAGTGTGTCAAGAACCCTCCTGTCACCTCTaGGATCATCTTCTTCATCTC +
Preference number: 4 (lower is better)
Translates to: KPSMTKQMREREITVCQEPSCHL*DHLLHL
Trigger: GAGATGAAGAAGATGATCTCAGAGGTGACAGGAGGG...TTCTTGACACACTGTGATCTCTCTCTCTCTCATTTGTTTGGTCATTGAGGGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372301.2
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp ACATGCCAGGACAACATGGGAGGATGTAAAGCTTATAATAGCAGGTCAATAAATCTTCTGGTACCTTCTTaGAGGGCTCCCAATGCCAAG +
Preference number: 4 (lower is better)
Translates to: TCQDNMGGCKAYNSRSINLLVPS*RAPNAK
Trigger: CTTGGCATTGGGAGCCCTTCAAGAAGGTACCAGAAG...ATTTATTGACCTGCTATTATAAGCTTTACATCCTCCCATGTTGTCCTGGCATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp ACCGTGTATACTGCACATGCCAGGACAACATGGGAGGATGTAAAGCTTATAATACTGCTGACTTTGCCGTaGGCATTTTACTCCTCATTC +
Preference number: 4 (lower is better)
Translates to: TVYTAHARTTWEDVKLIILLTLP*AFYSSF
Trigger: GAATGAGGAGTAAAATGCTCACGGCAAAGTCAGCAG...TATTATAAGCTTTACATCCTCCCATGTTGTCCTGGCATGTGCAGTATACACGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000247291.8
ENST00000372298.1
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp TTTCAAGCAGATTGGGGTCAGACAAGCAACCTTGTATTTCTCAGTCTTGGCTTAAGATCTGGGGAGAGATaGGTTAGACCGTGTATACTG +
Preference number: 4 (lower is better)
Translates to: FQADWGQTSNLVFLSLGLRSGER*VRPCIL
Trigger: CAGTATACACGGTCTAACTCATCTCTCCCCAGATCT...TAAGCCAAGACTGAGAAATACAAGGTTGCTTGTCTGACCCCAATCTGCTTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000247291.8
ENST00000372298.1
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp TTTCAAGCAGATTGGGGTCAGACAAGCAACCTTGTATTTCTCAGTCTTGGCTTATTTGAAGCAGATCCTTaGGCTCAAGATCAGCCAGTC +
Preference number: 4 (lower is better)
Translates to: FQADWGQTSNLVFLSLGLFEADP*AQDQPV
Trigger: GACTGGCTGATCTTGAGCTCAAGGATCTGCTTCAAA...TAAGCCAAGACTGAGAAATACAAGGTTGCTTGTCTGACCCCAATCTGCTTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp CAAACCCTCAATGACCAAACAAATGAGAGAGAGAGAGATCACAGTGTGTCAAGACAGAAAGAAGATGGTTaGAGTCCCAAGAAGCTGAGC +
Preference number: 4 (lower is better)
Translates to: QTLNDQTNERERDHSVSRQKEDG*SPKKLS
Trigger: GCTCAGCTTCTTGGGACTTCAACCATCTTCTTTCTG...TCTTGACACACTGTGATCTCTCTCTCTCTCATTTGTTTGGTCATTGAGGGTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp AGAGATGAGTTAGACCGTGTATACTGCACATGCCAGGACAACATGGGAGGATGTACTTTGACATCTTCCTaGATGAATTACAAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: RDELDRVYCTCQDNMGGCTLTSS*MNYKRQ
Trigger: CTGCCTCTTGTAATTCATGCAGGAAGATGTCAAAGT...ACATCCTCCCATGTTGTCCTGGCATGTGCAGTATACACGGTCTAACTCATCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp AGATTGGGGTCAGACAAGCAACCTTGTATTTCTCAGTCTTGGCTTACCAGTGCTCAGGGAGGAATGTTTTaGTGGGGTTTAAACTTCAAC +
Preference number: 4 (lower is better)
Translates to: RLGSDKQPCISQSWLTSAQGGMF*WGLNFN
Trigger: GTTGAAGTTTAAACCCCAGCAAAACATTCCTCCCTG...AGCACTGGTAAGCCAAGACTGAGAAATACAAGGTTGCTTGTCTGACCCCAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp AAGCAGATTGGGGTCAGACAAGCAACCTTGTATTTCTCAGTCTTGGCTTACCAGCTTAAGGAGAATTCCTaGAGTCTTGTAGAACTGTGG +
Preference number: 4 (lower is better)
Translates to: KQIGVRQATLYFSVLAYQLKENS*SLVELW
Trigger: CCACAGTTCTACAAGACTGCAGGAATTCTCCTTAAG...CTGGTAAGCCAAGACTGAGAAATACAAGGTTGCTTGTCTGACCCCAATCTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp AAACCCTCAATGACCAAACAAATGAGAGAGAGAGAGATCACAGTGTGTCAAGAAGAAAACCCTCTCTTCTaGCATTTCCAGAAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: KPSMTKQMREREITVCQEENPLF*HFQKLG
Trigger: CCCCAGCTTCTGGAAATGGCAGAAGAGAGGGTTTTC...TTCTTGACACACTGTGATCTCTCTCTCTCTCATTTGTTTGGTCATTGAGGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp AATGACCAAACAAATGAGAGAGAGAGAGATCACAGTGTGTCAAGAAGGGCAGCAGGCTGTGAGCTTTTCTaGAAGGTTCTCTTCATCACT +
Preference number: 4 (lower is better)
Translates to: NDQTNERERDHSVSRRAAGCELF*KVLFIT
Trigger: AGTGATGAAGAGAACCTTCCAGAAAAGCTCACAGCC...TGCTGCCCTTCTTGACACACTGTGATCTCTCTCTCTCTCATTTGTTTGGTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372301.2
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp AAACAAACCCTCAATGACCAAACAAATGAGAGAGAGAGAGATCACAGTGTGTCAAACCTCCCTAAAAGGTaGAACAGCACTGAGCTGACC +
Preference number: 4 (lower is better)
Translates to: KQTLNDQTNERERDHSVSNLPKR*NSTELT
Trigger: GGTCAGCTCAGTGCTGTTCCACCTTTTAGGGAGGTT...TGACACACTGTGATCTCTCTCTCTCTCATTTGTTTGGTCATTGAGGGTTTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp TTAGACCGTGTATACTGCACATGCCAGGACAACATGGGAGGATGTAAAGCTTATAGGTTTCAAGCAGATTaGGGTCAGACAAGCAACCTT +
Preference number: 4 (lower is better)
Translates to: LDRVYCTCQDNMGGCKAYRFQAD*GQTSNL
Trigger: AAGGTTGCTTGTCTGACCCCAATCTGCTTGAAACCT...ATAAGCTTTACATCCTCCCATGTTGTCCTGGCATGTGCAGTATACACGGTCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000247291.8
ENST00000372298.1
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp CCCTCAATGACCAAACAAATGAGAGAGAGAGAGATCACAGTGTGTCAAGAAGGGCTCATTGTCATTGTCTaGGTCTCACTTTCCTATTGG +
Preference number: 4 (lower is better)
Translates to: PSMTKQMREREITVCQEGLIVIV*VSLSYW
Trigger: CCAATAGGAAAGTGAGACCCAGACAATGACAATGAG...CCCTTCTTGACACACTGTGATCTCTCTCTCTCTCATTTGTTTGGTCATTGAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp AAACAAACCCTCAATGACCAAACAAATGAGAGAGAGAGAGATCACAGTGTGTCAGGACAAAGCCATACTTaGCAGTCCTCACGTTACTGG +
Preference number: 4 (lower is better)
Translates to: KQTLNDQTNERERDHSVSGQSHT*QSSRYW
Trigger: CCAGTAACGTGAGGACTGCCAAGTATGGCTTTGTCC...TGACACACTGTGATCTCTCTCTCTCTCATTTGTTTGGTCATTGAGGGTTTGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp ACATGCCAGGACAACATGGGAGGATGTAAAGCTTATAATAGCAGGTCAATAAATGCTTACCAGTGCTGCTaGCTTTGCCGTGAGCATTTT +
Preference number: 4 (lower is better)
Translates to: TCQDNMGGCKAYNSRSINAYQCC*LCREHF
Trigger: AAAATGCTCACGGCAAAGTCAGCAGCACTGGTAAGC...ATTTATTGACCTGCTATTATAAGCTTTACATCCTCCCATGTTGTCCTGGCATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000247291.8
ENST00000372298.1
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp TTAGACCGTGTATACTGCACATGCCAGGACAACATGGGAGGATGTAAAGCTTATAACTGTGGAACTTACTaGAATAAGCCTGACTGGTTC +
Preference number: 4 (lower is better)
Translates to: LDRVYCTCQDNMGGCKAYNCGTY*NKPDWF
Trigger: GAACCAGTCAGGCTTATTTCAGTAAGTTCCACAGTT...ATAAGCTTTACATCCTCCCATGTTGTCCTGGCATGTGCAGTATACACGGTCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp TTAGACCGTGTATACTGCACATGCCAGGACAACATGGGAGGATGTAAAGCTTATAGGGTTCTAAAATCCTaGGAGTCCATAAGAAAGGAC +
Preference number: 4 (lower is better)
Translates to: LDRVYCTCQDNMGGCKAYRVLKS*ESIRKD
Trigger: GTCCTTTCTTATGGACTCGCAGGATTTTAGAACCCT...ATAAGCTTTACATCCTCCCATGTTGTCCTGGCATGTGCAGTATACACGGTCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000247291.8
ENST00000372298.1
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp GCTGACTTTGACATCTTCCTGCATGAATTACAAGAGGCAGCTTCAGAGGCCTGGTTGGCCTACAGCAAGTaGTTAATAAATATGTTCAGT +
Preference number: 4 (lower is better)
Translates to: ADFDIFLHELQEAASEAWLAYSK*LINMFS
Trigger: ACTGAACATATTTATTAAGCACTTGCTGTAGGCCAA...CCAGGCCTCTGAAGCTGCCTCTTGTAATTCATGCAGGAAGATGTCAAAGTCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp ACATGCCAGGACAACATGGGAGGATGTAAAGCTTATAATAGCAGGTCAATAAATCTGGCCATTTCCTCATaGCTTACCTGTTTTCCTCCC +
Preference number: 4 (lower is better)
Translates to: TCQDNMGGCKAYNSRSINLAISS*LTCFPP
Trigger: GGGAGGAAAACAGGTAAGGCATGAGGAAATGGCCAG...ATTTATTGACCTGCTATTATAAGCTTTACATCCTCCCATGTTGTCCTGGCATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp ATGACCAAACAAATGAGAGAGAGAGAGATCACAGTGTGTCAAGAAGGGCAGCAAAAGATCAGCCAGTCATaGCCAAATAACCTCATTCCT +
Preference number: 4 (lower is better)
Translates to: MTKQMREREITVCQEGQQKISQS*PNNLIP
Trigger: AGGAATGAGGTTATTTGGCCATGACTGGCTGATCTT...TTGCTGCCCTTCTTGACACACTGTGATCTCTCTCTCTCTCATTTGTTTGGTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp AGCCCCTTTAAGGCAGATAATTTGTGCTTTACAAAGACATTGATGAAAACACAATCCTCACCTGTGAAATaGGAAGTCTGGCCCAGCTAC +
Preference number: 4 (lower is better)
Translates to: SPFKADNLCFTKTLMKTQSSPVK*EVWPSY
Trigger: GTAGCTGGGCCAGACTTCTCATTTCACAGGTGAGGA...TTGTGTTTTCATCAATGTCTTTGTAAAGCACAAATTATCTGCCTTAAAGGGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp AGCCCCTTTAAGGCAGATAATTTGTGCTTTACAAAGACATTGATGAAAACACAAGCCTTCCTCTCTGAGTaGGGAACAGGGACACTGAAT +
Preference number: 4 (lower is better)
Translates to: SPFKADNLCFTKTLMKTQAFLSE*GTGTLN
Trigger: ATTCAGTGTCCCTGTTCCTCACTCAGAGAGGAAGGC...TTGTGTTTTCATCAATGTCTTTGTAAAGCACAAATTATCTGCCTTAAAGGGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp AGCCCCTTTAAGGCAGATAATTTGTGCTTTACAAAGACATTGATGAAAACACAACGACAAACCCTCCTCTaGGTCATAGGGACAAAGCCA +
Preference number: 4 (lower is better)
Translates to: SPFKADNLCFTKTLMKTQRQTLL*VIGTKP
Trigger: TGGCTTTGTCCCTATGACTCAGAGGAGGGTTTGTCG...TTGTGTTTTCATCAATGTCTTTGTAAAGCACAAATTATCTGCCTTAAAGGGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp TATACTGCACATGCCAGGACAACATGGGAGGATGTAAAGCTTATAATAGCAGGTCTTAAGGAGAATTCCTaGAGTCTTGTAGAACTGTGG +
Preference number: 4 (lower is better)
Translates to: YTAHARTTWEDVKLIIAGLKENS*SLVELW
Trigger: CCACAGTTCTACAAGACTGCAGGAATTCTCCTTAAG...ACCTGCTATTATAAGCTTTACATCCTCCCATGTTGTCCTGGCATGTGCAGTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp ATTGTCATTGTCTGGGTCTCACTTTCCTATTGGACTCTAAGTTCCATGAATCTGAGGTTTCAAGCAGATTaGGGTCAGACAAGCAACCTT +
Preference number: 4 (lower is better)
Translates to: IVIVWVSLSYWTLSSMNLRFQAD*GQTSNL
Trigger: AAGGTTGCTTGTCTGACCCCAATCTGCTTGAAACCT...CAGATTCATGGAACTTAGAGTCCAATAGGAAAGTGAGACCCAGACAATGACAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp TGCACATGCCAGGACAACATGGGAGGATGTAAAGCTTATAATAGCAGGTCAATACATGCCAGGACAACATaGGAGGATGTAAAGCTTATA +
Preference number: 4 (lower is better)
Translates to: CTCQDNMGGCKAYNSRSIHARTT*EDVKLI
Trigger: TATAAGCTTTACATCCTCCCATGTTGTCCTGGCATG...TATTGACCTGCTATTATAAGCTTTACATCCTCCCATGTTGTCCTGGCATGTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000247291.8
ENST00000372298.1
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp TATACTGCACATGCCAGGACAACATGGGAGGATGTAAAGCTTATAATAGCAGGTCTCATTGTCATTGTCTaGGTCTCACTTTCCTATTGG +
Preference number: 4 (lower is better)
Translates to: YTAHARTTWEDVKLIIAGLIVIV*VSLSYW
Trigger: CCAATAGGAAAGTGAGACCCAGACAATGACAATGAG...ACCTGCTATTATAAGCTTTACATCCTCCCATGTTGTCCTGGCATGTGCAGTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR TCA 90 bp AATGTTTTGCTGGGGTTTAAACTTCAACTAGGCCTGTGTGCATTTGAAGCAGATAACTGTGGAACTTACTaGAATAAGCCTGACTGGTTC +
Preference number: 4 (lower is better)
Translates to: NVLLGFKLQLGLCAFEADNCGTY*NKPDWF
Trigger: GAACCAGTCAGGCTTATTTCAGTAAGTTCCACAGTT...ATCTGCTTCAAATGCACACAGGCCTAGTTGAAGTTTAAACCCCAGCAAAACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp ACATGCCAGGACAACATGGGAGGATGTAAAGCTTATAATAGCAGGTCAATAAATTTAGACCGTGTATACTaGACATGCCAGGACAACATG +
Preference number: 4 (lower is better)
Translates to: TCQDNMGGCKAYNSRSINLDRVY*TCQDNM
Trigger: CATGTTGTCCTGGCATGTGCAGTATACACGGTCTAA...ATTTATTGACCTGCTATTATAAGCTTTACATCCTCCCATGTTGTCCTGGCATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000247291.8
ENST00000372298.1
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp AAACAAACCCTCAATGACCAAACAAATGAGAGAGAGAGAGATCACAGTGTGTCAAGGGTTCTAAAATCCTaGGAGTCCATAAGAAAGGAC +
Preference number: 4 (lower is better)
Translates to: KQTLNDQTNERERDHSVSRVLKS*ESIRKD
Trigger: GTCCTTTCTTATGGACTCGCAGGATTTTAGAACCCT...TGACACACTGTGATCTCTCTCTCTCTCATTTGTTTGGTCATTGAGGGTTTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp AAACCCTCAATGACCAAACAAATGAGAGAGAGAGAGATCACAGTGTGTCAAGAAAGGGTTCTAAAATCCTaGGAGTCCATAAGAAAGGAC +
Preference number: 4 (lower is better)
Translates to: KPSMTKQMREREITVCQERVLKS*ESIRKD
Trigger: GTCCTTTCTTATGGACTCGCAGGATTTTAGAACCCT...TTCTTGACACACTGTGATCTCTCTCTCTCTCATTTGTTTGGTCATTGAGGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp CATTTATCTCATTGTCATTGTCTGGGTCTCACTTTCCTATTGGACTCTAAGTTCTGTATTTCTCAGTCTTaGCTTACCAGTGCTGCTGAC +
Preference number: 4 (lower is better)
Translates to: HLSHCHCLGLTFLLDSKFCISQS*LTSAAD
Trigger: GTCAGCAGCACTGGTAAGCCAAGACTGAGAAATACA...GAACTTAGAGTCCAATAGGAAAGTGAGACCCAGACAATGACAATGAGATAAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp ACATGCCAGGACAACATGGGAGGATGTAAAGCTTATAATAGCAGGTCAATAAATAGGGTTCTAAAATCCTaGGAGTCCATAAGAAAGGAC +
Preference number: 4 (lower is better)
Translates to: TCQDNMGGCKAYNSRSINRVLKS*ESIRKD
Trigger: GTCCTTTCTTATGGACTCGCAGGATTTTAGAACCCT...ATTTATTGACCTGCTATTATAAGCTTTACATCCTCCCATGTTGTCCTGGCATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000247291.8
ENST00000372298.1
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR GCA 90 bp AAACAAACCCTCAATGACCAAACAAATGAGAGAGAGAGAGATCACAGTGTGTCAACTTTGACATCTTCCTaGATGAATTACAAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: KQTLNDQTNERERDHSVSTLTSS*MNYKRQ
Trigger: CTGCCTCTTGTAATTCATGCAGGAAGATGTCAAAGT...TGACACACTGTGATCTCTCTCTCTCTCATTTGTTTGGTCATTGAGGGTTTGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp TTAGACCGTGTATACTGCACATGCCAGGACAACATGGGAGGATGTAAAGCTTATTGTCCATTTCATTATTaGATTCTTAACTGTTGGCCT +
Preference number: 4 (lower is better)
Translates to: LDRVYCTCQDNMGGCKAYCPFHY*ILNCWP
Trigger: AGGCCAACAGTTAAGAATCCAATAATGAAATGGACA...ATAAGCTTTACATCCTCCCATGTTGTCCTGGCATGTGCAGTATACACGGTCTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp AGCCCCTTTAAGGCAGATAATTTGTGCTTTACAAAGACATTGATGAAAACACAAGGCTGTGAGCTTTTCTaGAAGGTTCTCTTCATCACT +
Preference number: 4 (lower is better)
Translates to: SPFKADNLCFTKTLMKTQGCELF*KVLFIT
Trigger: AGTGATGAAGAGAACCTTCCAGAAAAGCTCACAGCC...TTGTGTTTTCATCAATGTCTTTGTAAAGCACAAATTATCTGCCTTAAAGGGGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
3UTR CAA 72 bp TTATCTCATTGTCATTGTCTGGGTCTCACTTTCCTATaGGACTCTAAGTTCCATGAATCTGTCCATTTCATT +
Preference number: 4 (lower is better)
Translates to: LSHCHCLGLTFL*DSKFHESVHFI
Trigger: AATGAAATGGACAGATTCATGGAACTTAGAGTCCAATAGGAAAGTGAGACCCAGACAATGACAATGAGATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CCA 90 bp ACATGCCAGGACAACATGGGAGGATGTAAAGCTTATAATAGCAGGTCAATAAATTGTCCATTTCATTATTaGATTCTTAACTGTTGGCCT +
Preference number: 4 (lower is better)
Translates to: TCQDNMGGCKAYNSRSINCPFHY*ILNCWP
Trigger: AGGCCAACAGTTAAGAATCCAATAATGAAATGGACA...ATTTATTGACCTGCTATTATAAGCTTTACATCCTCCCATGTTGTCCTGGCATGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS CCA 90 bp AGGAGGAGGCACAGGCGCCTGGTCCGGGCTCCGGCTAGCTGCGTGTaGCCGCGGGACCGAGGGGCGGAGGAACGGCGCGGGCGGCCGACA +
Preference number: 5 (lower is better)
Translates to: RRRHRRLVRAPASCV*PRDRGAEERRGRPT
Trigger: TGTCGGCCGCCCGCGCCGTTCCTCCGCCCCTCGGTCCCGCGGCCACACGCAGCTAGCCGGAGCCCGGACCAGGCGCCTGTGCCTCCTCCT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372309.7
CDS CCA 90 bp AGGCTTCGCGGACGCGGCGAGGGACGAGGAGGAGGCACAGGCGCCTaGTCCGGGCTCCGGCTAGCTGCGTGTGGCCGCGGGACCGAGGGG +
Preference number: 5 (lower is better)
Translates to: RLRGRGEGRGGGTGA*SGLRLAACGRGTEG
Trigger: CCCCTCGGTCCCGCGGCCACACGCAGCTAGCCGGAGCCCGGACCAGGCGCCTGTGCCTCCTCCTCGTCCCTCGCCGCGTCCGCGAAGCCT
77% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372309.7
CDS GCA 90 bp AGGGCTCCTGCGCCTAAGTGCCTCCCCTGGCAGGGAAGGTGGGTCTaGGCTGCCCCCTATGTGCCCGGCTCCTCTCCTTTCGAGGTGCTG +
Preference number: 5 (lower is better)
Translates to: RAPAPKCLPWQGRWV*AAPYVPGSSPFEVL
Trigger: CAGCACCTCGAAAGGAGAGGAGCCGGGCACATAGGGGGCAGCGCAGACCCACCTTCCCTGCCAGGGGAGGCACTTAGGCGCAGGAGCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478257.1
CDS TCA 90 bp AGGCCTCATTGCAATGCACTGGGCACGGCCCCGCCTCCACTTAGCTaGCGCTGGATCCTTCTTCGGCAGCCTGGGAGGCCGCCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: RPHCNALGTAPPPLS*RWILLRQPGRPPSS
Trigger: GGAGGAGGGCGGCCTCCCAGGCTGCCGAAGAAGGATCCAGCGTCAGCTAAGTGGAGGCGGGGCCGTGCCCAGTGCATTGCAATGAGGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472942.5
CDS GCA 90 bp CTCCCTCACCCCATCCTCCGGTTGATCTCGGCCAGCCTCCTCTCCTaGCGGGCTTTGAGCAAGCCGAACGCCTTCCCTCCTTGGAACCTG +
Preference number: 5 (lower is better)
Translates to: LPHPILRLISASLLS*RALSKPNAFPPWNL
Trigger: CAGGTTCCAAGGAGGGAAGGCGTTCGGCTTGCTCAAAGCCCGGCAGGAGAGGAGGCTGGCCGAGATCAACCGGAGGATGGGGTGAGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472942.5
CDS CCA 90 bp CGCTGCCCCCTATGTGCCCGGCTCCTCTCCTTTCGAGGTGCTGGCTaGGAACCAAGCGCCAGGGCCCCAAACAGAGGGACCTTTATGCTG +
Preference number: 5 (lower is better)
Translates to: RCPLCARLLSFRGAG*EPSARAPNRGTFML
Trigger: CAGCATAAAGGTCCCTCTGTTTGGGGCCCTGGCGCTTGGTTCCCAGCCAGCACCTCGAAAGGAGAGGAGCCGGGCACATAGGGGGCAGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478257.1
CDS GCA 90 bp ATGGGCCCACTGTCCGGGGGCCTTCCCTCCTATCGGGTAACCAGGTaGGACCAGACCCAGTTTGTCCCTTGTTCACCCCGGCTTCCTGTC +
Preference number: 5 (lower is better)
Translates to: MGPLSGGLPSYRVTR*DQTQFVPCSPRLPV
Trigger: GACAGGAAGCCGGGGTGAACAAGGGACAAACTGGGTCTGGTCGCACCTGGTTACCCGATAGGAGGGAAGGCCCCCGGACAGTGGGCCCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372301.2
CDS GCA 90 bp TCCCTCCCTGCACAGTACCGGTTGATCTCGGCCAGCCTCCTCTCCTaGCGGGCTTTGAGCAAGCCGAACGCCTTCCCTCCTTGGAACCTG +
Preference number: 5 (lower is better)
Translates to: SLPAQYRLISASLLS*RALSKPNAFPPWNL
Trigger: CAGGTTCCAAGGAGGGAAGGCGTTCGGCTTGCTCAAAGCCCGGCAGGAGAGGAGGCTGGCCGAGATCAACCGGTACTGTGCAGGGAGGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372309.7
CDS CCA 90 bp TCTGCGCTGCCCCCTATGTGCCCGGCTCCTCTCCTTTCGAGGTGCTaGCTGGGAACCAAGCGCCAGGGCCCCAAACAGAGGGACCTTTAT +
Preference number: 5 (lower is better)
Translates to: SALPPMCPAPLLSRC*LGTKRQGPKQRDLY
Trigger: ATAAAGGTCCCTCTGTTTGGGGCCCTGGCGCTTGGTTCCCAGCCAGCACCTCGAAAGGAGAGGAGCCGGGCACATAGGGGGCAGCGCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478257.1
CDS GCA 90 bp TGGTCACACAGAAACTCCCGGTTGATCTCGGCCAGCCTCCTCTCCTaGCGGGCTTTGAGCAAGCCGAACGCCTTCCCTCCTGGAGGAGAC +
Preference number: 5 (lower is better)
Translates to: WSHRNSRLISASLLS*RALSKPNAFPPGGD
Trigger: GTCTCCTCCAGGAGGGAAGGCGTTCGGCTTGCTCAAAGCCCGGCAGGAGAGGAGGCTGGCCGAGATCAACCGGGAGTTTCTGTGTGACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372314.3
CDS CCA 90 bp TGCTGGCTTGGCCACAGCCTCACTCCAGGCCTCATTGCAATGCACTaGGCACGGCCCCGCCTCCACTTAGCTGACGCTGGATCCTTCTTC +
Preference number: 5 (lower is better)
Translates to: CWLGHSLTPGLIAMH*ARPRLHLADAGSFF
Trigger: GAAGAAGGATCCAGCGTCAGCTAAGTGGAGGCGGGGCCGTGCCCAGTGCATTGCAATGAGGCCTGGAGTGAGGCTGTGGCCAAGCCAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472942.5
CDS-3UTR CAA 90 bp AGAGGCCCTGCAGCCTTGTCCCTACTCCAAGGTCTTCTCAGAGTGGCCTGGGGTCTCTCCTGCCGGGCTTaGAGCAAGCCGAACGCCTTC +
Preference number: 5 (lower is better)
Translates to: RGPAALSLLQGLLRVAWGLSCRA*SKPNAF
Trigger: GAAGGCGTTCGGCTTGCTCAAAGCCCGGCAGGAGAG...ACCCCAGGCCACTCTGAGAAGACCTTGGAGTAGGGACAAGGCTGCAGGGCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp AAACCCCAGGCCTCACTTCTGCCTCCGAAGCCCTCTGCTGCCCCAGTAAGGGACTGGGGCCACACCTGCTaGCTCTCCTCCCTTAAGGAG +
Preference number: 5 (lower is better)
Translates to: KPQASLLPPKPSAAPVRDWGHTC*LSSLKE
Trigger: CTCCTTAAGGGAGGAGAGCAAGCAGGTGTGGCCCCA...GTCCCTTACTGGGGCAGCAGAGGGCTTCGGAGGCAGAAGTGAGGCCTGGGGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp CTGGGCCCCAGTCCAGGGCACCTCCCTCTGGAGATAAGCCTGACCTTGGGCAAGTTCCAGGGACAACTCTaGAGACCCTCTCCTCCCAGG +
Preference number: 5 (lower is better)
Translates to: LGPSPGHLPLEISLTLGKFQGQL*RPSPPR
Trigger: CCTGGGAGGAGAGGGTCTCAAGAGTTGTCCCTGGAA...CTTGCCCAAGGTCAGGCTTATCTCCAGAGGGAGGTGCCCTGGACTGGGGCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS GCA 90 bp TGGTCACACAGAAACTCCCGGTTGATCTCGGCCAGCCTCCTCTCCTaGCGGGCTTTGAGCAAGCCGAACGCCTTCCCTCCTTGGAACCTG +
Preference number: 5 (lower is better)
Translates to: WSHRNSRLISASLLS*RALSKPNAFPPWNL
Trigger: CAGGTTCCAAGGAGGGAAGGCGTTCGGCTTGCTCAAAGCCCGGCAGGAGAGGAGGCTGGCCGAGATCAACCGGGAGTTTCTGTGTGACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000247291.8
ENST00000372298.1
ENST00000372300.5
ENST00000372302.5
CDS-3UTR CAA 90 bp AAACCCCAGGCCTCACTTCTGCCTCCGAAGCCCTCTGCTGCCCCAGTAAGGGACGAACGCCTTCCCTCCTaGGAACCTGTTGCTGAGCTC +
Preference number: 5 (lower is better)
Translates to: KPQASLLPPKPSAAPVRDERLPS*EPVAEL
Trigger: GAGCTCAGCAACAGGTTCCAAGGAGGGAAGGCGTTC...GTCCCTTACTGGGGCAGCAGAGGGCTTCGGAGGCAGAAGTGAGGCCTGGGGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
CDS-3UTR CAA 90 bp AGGCCCTGCAGCCTTGTCCCTACTCCAAGGTCTTCTCAGAGTGGCCTGGGGTCCGAACGCCTTCCCTCCTaGGAACCTGTTGCTGAGCTC +
Preference number: 5 (lower is better)
Translates to: RPCSLVPTPRSSQSGLGSERLPS*EPVAEL
Trigger: GAGCTCAGCAACAGGTTCCAAGGAGGGAAGGCGTTC...GGACCCCAGGCCACTCTGAGAAGACCTTGGAGTAGGGACAAGGCTGCAGGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
CDS-3UTR CAA 90 bp GGCACCAGTCTCCTCACCTGTGAAATGAGAAGTCTGGCCCAGCTACCCTCCAGGCGGCCTTGGAACCTGTaGCTGAGCTCGCCCGACATG +
Preference number: 5 (lower is better)
Translates to: GTSLLTCEMRSLAQLPSRRPWNL*LSSPDM
Trigger: CATGTCGGGCGAGCTCAGCAACAGGTTCCAAGGCCG...CCTGGAGGGTAGCTGGGCCAGACTTCTCATTTCACAGGTGAGGAGACTGGTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372314.3
CDS GCA 90 bp AGAGCCAGCAAGCAGCTGTGCTGGGAACATGAAATCCTCTGTAGCTaGGGCTCCCTCCCTGCACAGTACCGGTTGATCTCGGCCAGCCTC +
Preference number: 5 (lower is better)
Translates to: RASKQLCWEHEILCS*GSLPAQYRLISASL
Trigger: GAGGCTGGCCGAGATCAACCGGTACTGTGCAGGGAGGGAGCCGCAGCTACAGAGGATTTCATGTTCCCAGCACAGCTGCTTGCTGGCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372309.7
CDS CCA 90 bp AGCAGTGAGGGAGGATGTCGGAGCAGTGGGCTTGGTATGTTCAGATaGGAGCAGTGTGTCAAACGGACCGTGGGGCCTCTGCAGGTCACC +
Preference number: 5 (lower is better)
Translates to: SSEGGCRSSGLGMFR*EQCVKRTVGPLQVT
Trigger: GGTGACCTGCAGAGGCCCCACGGTCCGTTTGACACACTGCTCCCATCTGAACATACCAAGCCCACTGCTCCGACATCCTCCCTCACTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472942.5
CDS-3UTR CAA 90 bp GCTGACTTGAAGGCATGGGAGAGGGCGAATCCTGGACCAGGGTCTTCAGAGCAACTCTCCTGCCGGGCTTaGAGCAAGCCGAACGCCTTC +
Preference number: 5 (lower is better)
Translates to: ADLKAWERANPGPGSSEQLSCRA*SKPNAF
Trigger: GAAGGCGTTCGGCTTGCTCAAAGCCCGGCAGGAGAG...TTGCTCTGAAGACCCTGGTCCAGGATTCGCCCTCTCCCATGCCTTCAAGTCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp AACCCGAAAGAGGCCCTGCAGCCTTGTCCCTACTCCAAGGTCTTCTCAGAGTGGCTCTCCTGCCGGGCTTaGAGCAAGCCGAACGCCTTC +
Preference number: 5 (lower is better)
Translates to: NPKEALQPCPYSKVFSEWLSCRA*SKPNAF
Trigger: GAAGGCGTTCGGCTTGCTCAAAGCCCGGCAGGAGAG...CCACTCTGAGAAGACCTTGGAGTAGGGACAAGGCTGCAGGGCCTCTTTCGGGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp AGAGGCCCTGCAGCCTTGTCCCTACTCCAAGGTCTTCTCAGAGTGGCCTGGGGTAGAGGCCCTGCAGCCTaGTCCCTACTCCAAGGTCTT +
Preference number: 5 (lower is better)
Translates to: RGPAALSLLQGLLRVAWGRGPAA*SLLQGL
Trigger: AAGACCTTGGAGTAGGGACAAGGCTGCAGGGCCTCT...ACCCCAGGCCACTCTGAGAAGACCTTGGAGTAGGGACAAGGCTGCAGGGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp TCACAGTGTGTCAAGAAGGGCAGCAAGATCGGGAGGGAGGTATGGGGTGGGAAGGACTCTCACCCAGTCTaGGGCCCATCTAGGCCCCCA +
Preference number: 5 (lower is better)
Translates to: SQCVKKGSKIGREVWGGKDSHPV*GPSRPP
Trigger: TGGGGGCCTAGATGGGCCCAAGACTGGGTGAGAGTC...CTTCCCACCCCATACCTCCCTCCCGATCTTGCTGCCCTTCTTGACACACTGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp GAGCCATGGCACTGTCCAAGGAAACCCGAAAGAGGCCCTGCAGCCTTGTCCCTATGGGGCCACACCTGCTaGCTCTCCTCCCTTAAGGAG +
Preference number: 5 (lower is better)
Translates to: EPWHCPRKPERGPAALSLWGHTC*LSSLKE
Trigger: CTCCTTAAGGGAGGAGAGCAAGCAGGTGTGGCCCCA...TAGGGACAAGGCTGCAGGGCCTCTTTCGGGTTTCCTTGGACAGTGCCATGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp CCCAGTCCAGGGCACCTCCCTCTGGAGATAAGCCTGACCTTGGGCAAGGCACTTTTCCAGGGACAACTCTaGAGACCCTCTCCTCCCAGG +
Preference number: 5 (lower is better)
Translates to: PSPGHLPLEISLTLGKALFQGQL*RPSPPR
Trigger: CCTGGGAGGAGAGGGTCTCAAGAGTTGTCCCTGGAA...AAGTGCCTTGCCCAAGGTCAGGCTTATCTCCAGAGGGAGGTGCCCTGGACTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp TCACAGTGTGTCAAGAAGGGCAGCAAGATCGGGAGGGAGGTATGGGGTGGGAAGGCTTCCTGTCGCCCCTaGGAGGCAGATCTGCACTGG +
Preference number: 5 (lower is better)
Translates to: SQCVKKGSKIGREVWGGKASCRP*EADLHW
Trigger: CCAGTGCAGATCTGCCTCCAAGGGGCGACAGGAAGC...CTTCCCACCCCATACCTCCCTCCCGATCTTGCTGCCCTTCTTGACACACTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372301.2
CDS-3UTR CAA 90 bp ACCAGTCTCCTCACCTGTGAAATGAGAAGTCTGGCCCAGCTACCCTCCAGGGTGCCTCCTTGGAACCTGTaGCTGAGCTCGCCCGACATG +
Preference number: 5 (lower is better)
Translates to: TSLLTCEMRSLAQLPSRVPPWNL*LSSPDM
Trigger: CATGTCGGGCGAGCTCAGCAACAGGTTCCAAGGAGG...CACCCTGGAGGGTAGCTGGGCCAGACTTCTCATTTCACAGGTGAGGAGACTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372298.1
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
CDS-3UTR CAA 90 bp GCTGACTTGAAGGCATGGGAGAGGGCGAATCCTGGACCAGGGTCTTCAGAGCAACACAGAAACTCCCGGTaGATCTCGGCCAGCCTCCTC +
Preference number: 5 (lower is better)
Translates to: ADLKAWERANPGPGSSEQHRNSR*ISASLL
Trigger: GAGGAGGCTGGCCGAGATCAACCGGGAGTTTCTGTG...TTGCTCTGAAGACCCTGGTCCAGGATTCGCCCTCTCCCATGCCTTCAAGTCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372314.3
CDS-3UTR CAA 90 bp TGGGGCACCAGTCTCCTCACCTGTGAAATGAGAAGTCTGGCCCAGCTACCCTCCAAGCCTGATGCTGACTaGAAGGCATGGGAGAGGGCG +
Preference number: 5 (lower is better)
Translates to: WGTSLLTCEMRSLAQLPSKPDAD*KAWERA
Trigger: CGCCCTCTCCCATGCCTTCAAGTCAGCATCAGGCTT...GGAGGGTAGCTGGGCCAGACTTCTCATTTCACAGGTGAGGAGACTGGTGCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp GAGCCATGGCACTGTCCAAGGAAACCCGAAAGAGGCCCTGCAGCCTTGTCCCTAGACAAAGAGGCGGCCTaGGAACCTGTTGCTGAGCTC +
Preference number: 5 (lower is better)
Translates to: EPWHCPRKPERGPAALSLDKEAA*EPVAEL
Trigger: GAGCTCAGCAACAGGTTCCAAGGCCGCCTCTTTGTC...TAGGGACAAGGCTGCAGGGCCTCTTTCGGGTTTCCTTGGACAGTGCCATGGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372314.3
CDS GCA 90 bp CTGGAGCCGGGAGGATGCTCACACTGCAAACACTTTGGAGGGGAATaGAACCTCCAGGATATTTTCCATGACAGCCCAGGGCTCCTGCGC +
Preference number: 5 (lower is better)
Translates to: LEPGGCSHCKHFGGE*NLQDIFHDSPGLLR
Trigger: GCGCAGGAGCCCTGGGCTGTCATGGAAAATATCCTGGAGGTTGCATTCCCCTCCAAAGTGTTTGCAGTGTGAGCATCCTCCCGGCTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478257.1
CDS-3UTR CAA 90 bp CAACCACCAAGACCTCCCAGTCCTGTCCACTTAAGGTGTTGCAAAGGCTCTGCCCACAGAAACTCCCGGTaGATCTCGGCCAGCCTCCTC +
Preference number: 5 (lower is better)
Translates to: QPPRPPSPVHLRCCKGSAHRNSR*ISASLL
Trigger: GAGGAGGCTGGCCGAGATCAACCGGGAGTTTCTGTG...GGCAGAGCCTTTGCAACACCTTAAGTGGACAGGACTGGGAGGTCTTGGTGGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372314.3
CDS-3UTR CAA 90 bp TGGCACTGTCCAAGGAAACCCGAAAGAGGCCCTGCAGCCTTGTCCCTACTCCAAAGAGGCCCTGCAGCCTaGTCCCTACTCCAAGGTCTT +
Preference number: 5 (lower is better)
Translates to: WHCPRKPERGPAALSLLQRGPAA*SLLQGL
Trigger: AAGACCTTGGAGTAGGGACAAGGCTGCAGGGCCTCT...TTGGAGTAGGGACAAGGCTGCAGGGCCTCTTTCGGGTTTCCTTGGACAGTGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp GAGAGATCACAGTGTGTCAAGAAGGGCAGCAAGATCGGGAGGGAGGTATGGGGTTGGGGCCACACCTGCTaGCTCTCCTCCCTTAAGGAG +
Preference number: 5 (lower is better)
Translates to: ERSQCVKKGSKIGREVWGWGHTC*LSSLKE
Trigger: CTCCTTAAGGGAGGAGAGCAAGCAGGTGTGGCCCCA...ACCCCATACCTCCCTCCCGATCTTGCTGCCCTTCTTGACACACTGTGATCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp GCCAGAGAGCAGGACTGGAGGGTTCCTTCTGGTACCTTCTTGAAGGGCTCCCAATTCCAGGGACAACTCTaGAGACCCTCTCCTCCCAGG +
Preference number: 5 (lower is better)
Translates to: AREQDWRVPSGTFLKGSQFQGQL*RPSPPR
Trigger: CCTGGGAGGAGAGGGTCTCAAGAGTTGTCCCTGGAA...TTGGGAGCCCTTCAAGAAGGTACCAGAAGGAACCCTCCAGTCCTGCTCTCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp AGGCCCTGCAGCCTTGTCCCTACTCCAAGGTCTTCTCAGAGTGGCCTGGGGTCCTTCATCCACCTGAATTaGCCCGACAAACCCTCCTCT +
Preference number: 5 (lower is better)
Translates to: RPCSLVPTPRSSQSGLGSFIHLN*PDKPSS
Trigger: AGAGGAGGGTTTGTCGGGCAAATTCAGGTGGATGAA...GGACCCCAGGCCACTCTGAGAAGACCTTGGAGTAGGGACAAGGCTGCAGGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS CCA 90 bp GTGGGCTTGGTATGTTCAGATGGGAGCAGTGTGTCAAACGGACCGTaGGGCCTCTGCAGGTCACCCCCTTTGAAGGCTGTGAGCTTTTCT +
Preference number: 5 (lower is better)
Translates to: VGLVCSDGSSVSNGP*GLCRSPPLKAVSFS
Trigger: AGAAAAGCTCACAGCCTTCAAAGGGGGTGACCTGCAGAGGCCCCACGGTCCGTTTGACACACTGCTCCCATCTGAACATACCAAGCCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472942.5
CDS-3UTR CAA 90 bp AGAGAGAGATCACAGTGTGTCAAGAAGGGCAGCAAGATCGGGAGGGAGGTATGGCCTCCTTGGAACCTGTaGCTGAGCTCGCCCGACATG +
Preference number: 5 (lower is better)
Translates to: RERSQCVKKGSKIGREVWPPWNL*LSSPDM
Trigger: CATGTCGGGCGAGCTCAGCAACAGGTTCCAAGGAGG...CCATACCTCCCTCCCGATCTTGCTGCCCTTCTTGACACACTGTGATCTCTCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
CDS-3UTR CAA 90 bp CAACCACCAAGACCTCCCAGTCCTGTCCACTTAAGGTGTTGCAAAGGCTCTGCCGAACGCCTTCCCTCCTaGGAACCTGTTGCTGAGCTC +
Preference number: 5 (lower is better)
Translates to: QPPRPPSPVHLRCCKGSAERLPS*EPVAEL
Trigger: GAGCTCAGCAACAGGTTCCAAGGAGGGAAGGCGTTC...GGCAGAGCCTTTGCAACACCTTAAGTGGACAGGACTGGGAGGTCTTGGTGGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
CDS-3UTR CAA 90 bp ACCAGTGCTGCTGACTTTGCCGTGAGCATTTTACTCCTCATTCTCCCATCCTGGCTCTCCTGCCGGGCTTaGAGCAAGCCGAACGCCTTC +
Preference number: 5 (lower is better)
Translates to: TSAADFAVSILLLILPSWLSCRA*SKPNAF
Trigger: GAAGGCGTTCGGCTTGCTCAAAGCCCGGCAGGAGAG...CCAGGATGGGAGAATGAGGAGTAAAATGCTCACGGCAAAGTCAGCAGCACTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000247291.8
ENST00000372298.1
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp CCACCAAGACCTCCCAGTCCTGTCCACTTAAGGTGTTGCAAAGGCTCTGCCAAGAGAGGCCCTGCAGCCTaGTCCCTACTCCAAGGTCTT +
Preference number: 5 (lower is better)
Translates to: PPRPPSPVHLRCCKGSAKRGPAA*SLLQGL
Trigger: AAGACCTTGGAGTAGGGACAAGGCTGCAGGGCCTCT...CTTGGCAGAGCCTTTGCAACACCTTAAGTGGACAGGACTGGGAGGTCTTGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp CACCTCCCTCTGGAGATAAGCCTGACCTTGGGCAAGGCACTTAATCCCTGTGGGCTCCAAGTGTTGACCTaGGAGGCTGTCTCTTCCCAG +
Preference number: 5 (lower is better)
Translates to: HLPLEISLTLGKALNPCGLQVLT*EAVSSQ
Trigger: CTGGGAAGAGACAGCCTCCAAGGTCAACACTTGGAG...CCCACAGGGATTAAGTGCCTTGCCCAAGGTCAGGCTTATCTCCAGAGGGAGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp GAGCCATGGCACTGTCCAAGGAAACCCGAAAGAGGCCCTGCAGCCTTGTCCCTAAACCCTCTCCAAGTGTaGACCTTGGAGGCTGTCTCT +
Preference number: 5 (lower is better)
Translates to: EPWHCPRKPERGPAALSLNPLQV*TLEAVS
Trigger: AGAGACAGCCTCCAAGGTCAACACTTGGAGAGGGTT...TAGGGACAAGGCTGCAGGGCCTCTTTCGGGTTTCCTTGGACAGTGCCATGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp GGCACCAGTCTCCTCACCTGTGAAATGAGAAGTCTGGCCCAGCTACCCTCCAGGAACCCTCTCCAAGTGTaGACCTTGGAGGCTGTCTCT +
Preference number: 5 (lower is better)
Translates to: GTSLLTCEMRSLAQLPSRNPLQV*TLEAVS
Trigger: AGAGACAGCCTCCAAGGTCAACACTTGGAGAGGGTT...CCTGGAGGGTAGCTGGGCCAGACTTCTCATTTCACAGGTGAGGAGACTGGTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp GTGGCTGTGTCCTGGGTGACACCAGAGCACTGGAGCCATGGCACTGTCCAAGGATGTCCACTTAAGGTGTaGCAAAGGCTCTGCCAAGAC +
Preference number: 5 (lower is better)
Translates to: VAVSWVTPEHWSHGTVQGCPLKV*QRLCQD
Trigger: GTCTTGGCAGAGCCTTTGCAACACCTTAAGTGGACA...TCCTTGGACAGTGCCATGGCTCCAGTGCTCTGGTGTCACCCAGGACACAGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp TGGGGCACCAGTCTCCTCACCTGTGAAATGAGAAGTCTGGCCCAGCTACCCTCCGGGACAAAGCCATACTaGGCAGTCCTCACGTTACTG +
Preference number: 5 (lower is better)
Translates to: WGTSLLTCEMRSLAQLPSGTKPY*AVLTLL
Trigger: CAGTAACGTGAGGACTGCCAAGTATGGCTTTGTCCC...GGAGGGTAGCTGGGCCAGACTTCTCATTTCACAGGTGAGGAGACTGGTGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp CATGGCACTGTCCAAGGAAACCCGAAAGAGGCCCTGCAGCCTTGTCCCTACTCCGGGACAAAGCCATACTaGGCAGTCCTCACGTTACTG +
Preference number: 5 (lower is better)
Translates to: HGTVQGNPKEALQPCPYSGTKPY*AVLTLL
Trigger: CAGTAACGTGAGGACTGCCAAGTATGGCTTTGTCCC...GGAGTAGGGACAAGGCTGCAGGGCCTCTTTCGGGTTTCCTTGGACAGTGCCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS TCA 90 bp ACTTCTGGTCACACAGAAACTCCTACAGAGGTGAGAGGACAGTGCTaGGCAAGGGACTGGGGACAGAAGTCACCCACACATGGGCCCACT +
Preference number: 5 (lower is better)
Translates to: TSGHTETPTEVRGQC*ARDWGQKSPTHGPT
Trigger: AGTGGGCCCATGTGTGGGTGACTTCTGTCCCCAGTCCCTTGCTCAGCACTGTCCTCTCACCTCTGTAGGAGTTTCTGTGTGACCAGAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372301.2
CDS-3UTR CAA 90 bp GGGAGAGATGAGTTAGACCGTGTATACTGCACATGCCAGGACAACATGGGAGGACACAGAAACTCCCGGTaGATCTCGGCCAGCCTCCTC +
Preference number: 5 (lower is better)
Translates to: GRDELDRVYCTCQDNMGGHRNSR*ISASLL
Trigger: GAGGAGGCTGGCCGAGATCAACCGGGAGTTTCTGTG...TCCTCCCATGTTGTCCTGGCATGTGCAGTATACACGGTCTAACTCATCTCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372298.1
ENST00000372300.5
ENST00000372302.5
ENST00000372314.3
CDS-3UTR CAA 90 bp AAACCCCAGGCCTCACTTCTGCCTCCGAAGCCCTCTGCTGCCCCAGTAAGGGACTCAATCTCGCCTTCATaGTTCAGGTCAAACTCCATG +
Preference number: 5 (lower is better)
Translates to: KPQASLLPPKPSAAPVRDSISPS*FRSNSM
Trigger: CATGGAGTTTGACCTGAACAATGAAGGCGAGATTGA...GTCCCTTACTGGGGCAGCAGAGGGCTTCGGAGGCAGAAGTGAGGCCTGGGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp GCTGACTTGAAGGCATGGGAGAGGGCGAATCCTGGACCAGGGTCTTCAGAGCAACCTTCTGGTACCTTCTaGAAGGGCTCCCAATGCCAA +
Preference number: 5 (lower is better)
Translates to: ADLKAWERANPGPGSSEQPSGTF*KGSQCQ
Trigger: TTGGCATTGGGAGCCCTTCAAGAAGGTACCAGAAGG...TTGCTCTGAAGACCCTGGTCCAGGATTCGCCCTCTCCCATGCCTTCAAGTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp AGGCCCTGCAGCCTTGTCCCTACTCCAAGGTCTTCTCAGAGTGGCCTGGGGTCCGTCAGACAAGCAACCTaGTATTTCTCAGTCTTGGCT +
Preference number: 5 (lower is better)
Translates to: RPCSLVPTPRSSQSGLGSVRQAT*YFSVLA
Trigger: AGCCAAGACTGAGAAATACAAGGTTGCTTGTCTGAC...GGACCCCAGGCCACTCTGAGAAGACCTTGGAGTAGGGACAAGGCTGCAGGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp CCTCTGAGTCATAGGGACAAAGCCATACTTGGCAGTCCTCACGTTACTGGTTACGACTCTCACCCAGTCTaGGGCCCATCTAGGCCCCCA +
Preference number: 5 (lower is better)
Translates to: PLSHRDKAILGSPHVTGYDSHPV*GPSRPP
Trigger: TGGGGGCCTAGATGGGCCCAAGACTGGGTGAGAGTC...GTAACCAGTAACGTGAGGACTGCCAAGTATGGCTTTGTCCCTATGACTCAGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp TGGGGCACCAGTCTCCTCACCTGTGAAATGAGAAGTCTGGCCCAGCTACCCTCCTGTCCACTTAAGGTGTaGCAAAGGCTCTGCCAAGAC +
Preference number: 5 (lower is better)
Translates to: WGTSLLTCEMRSLAQLPSCPLKV*QRLCQD
Trigger: GTCTTGGCAGAGCCTTTGCAACACCTTAAGTGGACA...GGAGGGTAGCTGGGCCAGACTTCTCATTTCACAGGTGAGGAGACTGGTGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp AAACCCCAGGCCTCACTTCTGCCTCCGAAGCCCTCTGCTGCCCCAGTAAGGGACTCAGAAAGAAGATGGTaGAAGTCCCAAGAAGCTGAG +
Preference number: 5 (lower is better)
Translates to: KPQASLLPPKPSAAPVRDSERRW*KSQEAE
Trigger: CTCAGCTTCTTGGGACTTCAACCATCTTCTTTCTGA...GTCCCTTACTGGGGCAGCAGAGGGCTTCGGAGGCAGAAGTGAGGCCTGGGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp GGGAGAGATGAGTTAGACCGTGTATACTGCACATGCCAGGACAACATGGGAGGAGAACGCCTTCCCTCCTaGGAACCTGTTGCTGAGCTC +
Preference number: 5 (lower is better)
Translates to: GRDELDRVYCTCQDNMGGERLPS*EPVAEL
Trigger: GAGCTCAGCAACAGGTTCCAAGGAGGGAAGGCGTTC...TCCTCCCATGTTGTCCTGGCATGTGCAGTATACACGGTCTAACTCATCTCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372298.1
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
CDS-3UTR CAA 90 bp CCAGGGCACCTCCCTCTGGAGATAAGCCTGACCTTGGGCAAGGCACTTAATCCCAACATCATGACTAACTaGAGGACAGCCGACCGTTTC +
Preference number: 5 (lower is better)
Translates to: PGHLPLEISLTLGKALNPNIMTN*RTADRF
Trigger: GAAACGGTCGGCTGTCCTCAAGTTAGTCATGATGTT...GGGATTAAGTGCCTTGCCCAAGGTCAGGCTTATCTCCAGAGGGAGGTGCCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000247291.8
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp CACCTCCCTCTGGAGATAAGCCTGACCTTGGGCAAGGCACTTAATCCCTGTGGGTTGGGGCTGCTCTCGTaGGCTTTTCCTTCAAACATC +
Preference number: 5 (lower is better)
Translates to: HLPLEISLTLGKALNPCGLGLLS*AFPSNI
Trigger: GATGTTTGAAGGAAAAGCCAACGAGAGCAGCCCCAA...CCCACAGGGATTAAGTGCCTTGCCCAAGGTCAGGCTTATCTCCAGAGGGAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp TGGCACTGTCCAAGGAAACCCGAAAGAGGCCCTGCAGCCTTGTCCCTACTCCAATTCATCCACCTGAATTaGCCCGACAAACCCTCCTCT +
Preference number: 5 (lower is better)
Translates to: WHCPRKPERGPAALSLLQFIHLN*PDKPSS
Trigger: AGAGGAGGGTTTGTCGGGCAAATTCAGGTGGATGAA...TTGGAGTAGGGACAAGGCTGCAGGGCCTCTTTCGGGTTTCCTTGGACAGTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp TGCATTAGGGTTCTAAAATCCTGCGAGTCCATAAGAAAGGACACAGGTGACCCCCCTGCACAGTACCGGTaGATCTCGGCCAGCCTCCTC +
Preference number: 5 (lower is better)
Translates to: CIRVLKSCESIRKDTGDPPAQYR*ISASLL
Trigger: GAGGAGGCTGGCCGAGATCAACCGGTACTGTGCAGG...GGGGTCACCTGTGTCCTTTCTTATGGACTCGCAGGATTTTAGAACCCTAATGCA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000372309.7
CDS GCA 90 bp TTTGAGGAACACTTGGCCAAGTTCTTTGCCCTGGAGCCGGGAGGATaGTCACACTGCAAACACTTTGGAGGGGAATGCAACCTCCAGGAT +
Preference number: 5 (lower is better)
Translates to: FEEHLAKFFALEPGG*SHCKHFGGECNLQD
Trigger: ATCCTGGAGGTTGCATTCCCCTCCAAAGTGTTTGCAGTGTGAGCATCCTCCCGGCTCCAGGGCAAAGAACTTGGCCAAGTGTTCCTCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478257.1
CDS CCA 90 bp GTGTGCTTTTTAGCGTCCCAGGCAGTTCTGATGGGCAACCGGGTGTaGGAACCACTGATTCAGGGGACCTGTGATTCTGAAACCAGGAAA +
Preference number: 5 (lower is better)
Translates to: VCFLASQAVLMGNRV*EPLIQGTCDSETRK
Trigger: TTTCCTGGTTTCAGAATCACAGGTCCCCTGAATCAGTGGTTCCCACACCCGGTTGCCCATCAGAACTGCCTGGGACGCTAAAAAGCACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472942.5
CDS-3UTR CAA 90 bp GGTCAGACAAGCAACCTTGTATTTCTCAGTCTTGGCTTACCAGTGCTGCTGACTCCTCCTTGGAACCTGTaGCTGAGCTCGCCCGACATG +
Preference number: 5 (lower is better)
Translates to: GQTSNLVFLSLGLPVLLTPPWNL*LSSPDM
Trigger: CATGTCGGGCGAGCTCAGCAACAGGTTCCAAGGAGG...AGTCAGCAGCACTGGTAAGCCAAGACTGAGAAATACAAGGTTGCTTGTCTGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372298.1
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
CDS-3UTR CAA 90 bp GCAGAGTCAGGTTTCAAGCAGATTGGGGTCAGACAAGCAACCTTGTATTTCTCACTCTCCTGCCGGGCTTaGAGCAAGCCGAACGCCTTC +
Preference number: 5 (lower is better)
Translates to: AESGFKQIGVRQATLYFSLSCRA*SKPNAF
Trigger: GAAGGCGTTCGGCTTGCTCAAAGCCCGGCAGGAGAG...TGAGAAATACAAGGTTGCTTGTCTGACCCCAATCTGCTTGAAACCTGACTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000247291.8
ENST00000372298.1
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp GAGCCATGGCACTGTCCAAGGAAACCCGAAAGAGGCCCTGCAGCCTTGTCCCTATCAATCTCGCCTTCATaGTTCAGGTCAAACTCCATG +
Preference number: 5 (lower is better)
Translates to: EPWHCPRKPERGPAALSLSISPS*FRSNSM
Trigger: CATGGAGTTTGACCTGAACAATGAAGGCGAGATTGA...TAGGGACAAGGCTGCAGGGCCTCTTTCGGGTTTCCTTGGACAGTGCCATGGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp TCACAGTGTGTCAAGAAGGGCAGCAAGATCGGGAGGGAGGTATGGGGTGGGAAGTCAGTGAGCCTGAACTaGGCTTGGAGACTTTCTGAA +
Preference number: 5 (lower is better)
Translates to: SQCVKKGSKIGREVWGGKSVSLN*AWRLSE
Trigger: TTCAGAAAGTCTCCAAGCCAAGTTCAGGCTCACTGA...CTTCCCACCCCATACCTCCCTCCCGATCTTGCTGCCCTTCTTGACACACTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp CTCAGTAACCTCCCTAAAAGGTGGAACAGCACTGAGCTGACCTTTCCCCCAAAAAGAGGCCCTGCAGCCTaGTCCCTACTCCAAGGTCTT +
Preference number: 5 (lower is better)
Translates to: LSNLPKRWNSTELTFPPKRGPAA*SLLQGL
Trigger: AAGACCTTGGAGTAGGGACAAGGCTGCAGGGCCTCT...TTTTGGGGGAAAGGTCAGCTCAGTGCTGTTCCACCTTTTAGGGAGGTTACTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp AGAGAGAGATCACAGTGTGTCAAGAAGGGCAGCAAGATCGGGAGGGAGGTATGGCCTTCTGGTACCTTCTaGAAGGGCTCCCAATGCCAA +
Preference number: 5 (lower is better)
Translates to: RERSQCVKKGSKIGREVWPSGTF*KGSQCQ
Trigger: TTGGCATTGGGAGCCCTTCAAGAAGGTACCAGAAGG...CCATACCTCCCTCCCGATCTTGCTGCCCTTCTTGACACACTGTGATCTCTCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp TGGGGCACCAGTCTCCTCACCTGTGAAATGAGAAGTCTGGCCCAGCTACCCTCCGTCAGACAAGCAACCTaGTATTTCTCAGTCTTGGCT +
Preference number: 5 (lower is better)
Translates to: WGTSLLTCEMRSLAQLPSVRQAT*YFSVLA
Trigger: AGCCAAGACTGAGAAATACAAGGTTGCTTGTCTGAC...GGAGGGTAGCTGGGCCAGACTTCTCATTTCACAGGTGAGGAGACTGGTGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000247291.8
ENST00000372298.1
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp TCTTCAGAGCAAGTGAAACCCTCTCCAAGTGTTGACCTTGGAGGCTGTCTCTTCAAGCCTGATGCTGACTaGAAGGCATGGGAGAGGGCG +
Preference number: 5 (lower is better)
Translates to: SSEQVKPSPSVDLGGCLFKPDAD*KAWERA
Trigger: CGCCCTCTCCCATGCCTTCAAGTCAGCATCAGGCTT...GAAGAGACAGCCTCCAAGGTCAACACTTGGAGAGGGTTTCACTTGCTCTGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp GACTGCAGGGAAGTCACCCCATACCTCCCCCTTCCTAACATTTATCTCATTGTCAAGCCTGATGCTGACTaGAAGGCATGGGAGAGGGCG +
Preference number: 5 (lower is better)
Translates to: DCREVTPYLPLPNIYLIVKPDAD*KAWERA
Trigger: CGCCCTCTCCCATGCCTTCAAGTCAGCATCAGGCTT...GACAATGAGATAAATGTTAGGAAGGGGGAGGTATGGGGTGACTTCCCTGCAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp AAACCCCAGGCCTCACTTCTGCCTCCGAAGCCCTCTGCTGCCCCAGTAAGGGACCTAACATTTATCTCATaGTCATTGTCTGGGTCTCAC +
Preference number: 5 (lower is better)
Translates to: KPQASLLPPKPSAAPVRDLTFIS*SLSGSH
Trigger: GTGAGACCCAGACAATGACAATGAGATAAATGTTAG...GTCCCTTACTGGGGCAGCAGAGGGCTTCGGAGGCAGAAGTGAGGCCTGGGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp TCCCCGACCCAGAGCCCCTTTAAGGCAGATAATTTGTGCTTTACAAAGACATTGGACTCTCACCCAGTCTaGGGCCCATCTAGGCCCCCA +
Preference number: 5 (lower is better)
Translates to: SPTQSPFKADNLCFTKTLDSHPV*GPSRPP
Trigger: TGGGGGCCTAGATGGGCCCAAGACTGGGTGAGAGTC...CAATGTCTTTGTAAAGCACAAATTATCTGCCTTAAAGGGGCTCTGGGTCGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp CCCTCAATGACCAAACAAATGAGAGAGAGAGAGATCACAGTGTGTCAAGAAGGGGCGACCAGACCCAGTTaGTCCCTTGTTCACCCCGGC +
Preference number: 5 (lower is better)
Translates to: PSMTKQMREREITVCQEGATRPS*SLVHPG
Trigger: GCCGGGGTGAACAAGGGACAAACTGGGTCTGGTCGC...CCCTTCTTGACACACTGTGATCTCTCTCTCTCTCATTTGTTTGGTCATTGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372301.2
CDS GCA 90 bp CACTTGGCCAAGTTCTTTGCCCTGGAGCCGGGAGGATGCTCACACTaGAAACACTTTGGAGGGGAATGCAACCTCCAGGATATTTTCCAT +
Preference number: 5 (lower is better)
Translates to: HLAKFFALEPGGCSH*KHFGGECNLQDIFH
Trigger: ATGGAAAATATCCTGGAGGTTGCATTCCCCTCCAAAGTGTTTGCAGTGTGAGCATCCTCCCGGCTCCAGGGCAAAGAACTTGGCCAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478257.1
CDS-3UTR CAA 90 bp AGCAGATTGGGGTCAGACAAGCAACCTTGTATTTCTCAGTCTTGGCTTACCAGTCCTCCTTGGAACCTGTaGCTGAGCTCGCCCGACATG +
Preference number: 5 (lower is better)
Translates to: SRLGSDKQPCISQSWLTSPPWNL*LSSPDM
Trigger: CATGTCGGGCGAGCTCAGCAACAGGTTCCAAGGAGG...ACTGGTAAGCCAAGACTGAGAAATACAAGGTTGCTTGTCTGACCCCAATCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372298.1
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
CDS-3UTR CAA 90 bp AAGGTTCTGAGAGATCTGGGGAGAGATGAGTTAGACCGTGTATACTGCACATGCGAACGCCTTCCCTCCTaGGAACCTGTTGCTGAGCTC +
Preference number: 5 (lower is better)
Translates to: KVLRDLGRDELDRVYCTCERLPS*EPVAEL
Trigger: GAGCTCAGCAACAGGTTCCAAGGAGGGAAGGCGTTC...GCATGTGCAGTATACACGGTCTAACTCATCTCTCCCCAGATCTCTCAGAACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372298.1
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
CDS-3UTR CAA 90 bp CCATACCTCCCCCTTCCTAACATTTATCTCATTGTCATTGTCTGGGTCTCACTTCTCTCCTGCCGGGCTTaGAGCAAGCCGAACGCCTTC +
Preference number: 5 (lower is better)
Translates to: PYLPLPNIYLIVIVWVSLLSCRA*SKPNAF
Trigger: GAAGGCGTTCGGCTTGCTCAAAGCCCGGCAGGAGAG...AAGTGAGACCCAGACAATGACAATGAGATAAATGTTAGGAAGGGGGAGGTATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp AGAGAGAGATCACAGTGTGTCAAGAAGGGCAGCAAGATCGGGAGGGAGGTATGGTTGGGGCTGCTCTCGTaGGCTTTTCCTTCAAACATC +
Preference number: 5 (lower is better)
Translates to: RERSQCVKKGSKIGREVWLGLLS*AFPSNI
Trigger: GATGTTTGAAGGAAAAGCCAACGAGAGCAGCCCCAA...CCATACCTCCCTCCCGATCTTGCTGCCCTTCTTGACACACTGTGATCTCTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372301.2
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp GCTGACTTTGACATCTTCCTGCATGAATTACAAGAGGCAGCTTCAGAGGCCTGGCTCCAAGTGTTGACCTaGGAGGCTGTCTCTTCCCAG +
Preference number: 5 (lower is better)
Translates to: ADFDIFLHELQEAASEAWLQVLT*EAVSSQ
Trigger: CTGGGAAGAGACAGCCTCCAAGGTCAACACTTGGAG...CCAGGCCTCTGAAGCTGCCTCTTGTAATTCATGCAGGAAGATGTCAAAGTCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp TCAATGACCAAACAAATGAGAGAGAGAGAGATCACAGTGTGTCAAGAAGGGCAGGACTCTCACCCAGTCTaGGGCCCATCTAGGCCCCCA +
Preference number: 5 (lower is better)
Translates to: SMTKQMREREITVCQEGQDSHPV*GPSRPP
Trigger: TGGGGGCCTAGATGGGCCCAAGACTGGGTGAGAGTC...CTGCCCTTCTTGACACACTGTGATCTCTCTCTCTCTCATTTGTTTGGTCATTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp GGCACCAGTCTCCTCACCTGTGAAATGAGAAGTCTGGCCCAGCTACCCTCCAGGACAGGGAGGAATGTTTaGCTGGGGTTTAAACTTCAA +
Preference number: 5 (lower is better)
Translates to: GTSLLTCEMRSLAQLPSRTGRNV*LGFKLQ
Trigger: TTGAAGTTTAAACCCCAGCAAAACATTCCTCCCTGT...CCTGGAGGGTAGCTGGGCCAGACTTCTCATTTCACAGGTGAGGAGACTGGTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp CCCTCAATGACCAAACAAATGAGAGAGAGAGAGATCACAGTGTGTCAAGAAGGGTGGGGCCACACCTGCTaGCTCTCCTCCCTTAAGGAG +
Preference number: 5 (lower is better)
Translates to: PSMTKQMREREITVCQEGWGHTC*LSSLKE
Trigger: CTCCTTAAGGGAGGAGAGCAAGCAGGTGTGGCCCCA...CCCTTCTTGACACACTGTGATCTCTCTCTCTCTCATTTGTTTGGTCATTGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS CCA 90 bp ACAACTGGAAGTGATTTGAGGAACACTTGGCCAAGTTCTTTGCCCTaGAGCCGGGAGGATGCTCACACTGCAAACACTTTGGAGGGGAAT +
Preference number: 5 (lower is better)
Translates to: TTGSDLRNTWPSSLP*SREDAHTANTLEGN
Trigger: ATTCCCCTCCAAAGTGTTTGCAGTGTGAGCATCCTCCCGGCTCCAGGGCAAAGAACTTGGCCAAGTGTTCCTCAAATCACTTCCAGTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478257.1
CDS-3UTR CAA 90 bp ACCCTCAATGACCAAACAAATGAGAGAGAGAGAGATCACAGTGTGTCAAGAAGGCCTCCTTGGAACCTGTaGCTGAGCTCGCCCGACATG +
Preference number: 5 (lower is better)
Translates to: TLNDQTNERERDHSVSRRPPWNL*LSSPDM
Trigger: CATGTCGGGCGAGCTCAGCAACAGGTTCCAAGGAGG...CCTTCTTGACACACTGTGATCTCTCTCTCTCTCATTTGTTTGGTCATTGAGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
CDS-3UTR CAA 90 bp ATGACCAAACAAATGAGAGAGAGAGAGATCACAGTGTGTCAAGAAGGGCAGCAACACAGAAACTCCCGGTaGATCTCGGCCAGCCTCCTC +
Preference number: 5 (lower is better)
Translates to: MTKQMREREITVCQEGQQHRNSR*ISASLL
Trigger: GAGGAGGCTGGCCGAGATCAACCGGGAGTTTCTGTG...TTGCTGCCCTTCTTGACACACTGTGATCTCTCTCTCTCTCATTTGTTTGGTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372314.3
CDS-3UTR CAA 90 bp TCACAGTGTGTCAAGAAGGGCAGCAAGATCGGGAGGGAGGTATGGGGTGGGAAGTCCATGTACTTCTCTTaGAAGGCTGTGAGCTTTTCT +
Preference number: 5 (lower is better)
Translates to: SQCVKKGSKIGREVWGGKSMYFS*KAVSFS
Trigger: AGAAAAGCTCACAGCCTTCAAAGAGAAGTACATGGA...CTTCCCACCCCATACCTCCCTCCCGATCTTGCTGCCCTTCTTGACACACTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372301.2
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp AAGGTTCTGAGAGATCTGGGGAGAGATGAGTTAGACCGTGTATACTGCACATGCCTCCAAGTGTTGACCTaGGAGGCTGTCTCTTCCCAG +
Preference number: 5 (lower is better)
Translates to: KVLRDLGRDELDRVYCTCLQVLT*EAVSSQ
Trigger: CTGGGAAGAGACAGCCTCCAAGGTCAACACTTGGAG...GCATGTGCAGTATACACGGTCTAACTCATCTCTCCCCAGATCTCTCAGAACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp AACCCGAAAGAGGCCCTGCAGCCTTGTCCCTACTCCAAGGTCTTCTCAGAGTGGACAGGGAGGAATGTTTaGCTGGGGTTTAAACTTCAA +
Preference number: 5 (lower is better)
Translates to: NPKEALQPCPYSKVFSEWTGRNV*LGFKLQ
Trigger: TTGAAGTTTAAACCCCAGCAAAACATTCCTCCCTGT...CCACTCTGAGAAGACCTTGGAGTAGGGACAAGGCTGCAGGGCCTCTTTCGGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp TCACAGTGTGTCAAGAAGGGCAGCAAGATCGGGAGGGAGGTATGGGGTGGGAAGACAGGGAGGAATGTTTaGCTGGGGTTTAAACTTCAA +
Preference number: 5 (lower is better)
Translates to: SQCVKKGSKIGREVWGGKTGRNV*LGFKLQ
Trigger: TTGAAGTTTAAACCCCAGCAAAACATTCCTCCCTGT...CTTCCCACCCCATACCTCCCTCCCGATCTTGCTGCCCTTCTTGACACACTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp TCAATGACCAAACAAATGAGAGAGAGAGAGATCACAGTGTGTCAAGAAGGGCAGTGGGGCCACACCTGCTaGCTCTCCTCCCTTAAGGAG +
Preference number: 5 (lower is better)
Translates to: SMTKQMREREITVCQEGQWGHTC*LSSLKE
Trigger: CTCCTTAAGGGAGGAGAGCAAGCAGGTGTGGCCCCA...CTGCCCTTCTTGACACACTGTGATCTCTCTCTCTCTCATTTGTTTGGTCATTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp CCCTCAATGACCAAACAAATGAGAGAGAGAGAGATCACAGTGTGTCAAGAAGGGGACCCAGTTTGTCCCTaGTTCACCCCGGCTTCCTGT +
Preference number: 5 (lower is better)
Translates to: PSMTKQMREREITVCQEGDPVCP*FTPASC
Trigger: ACAGGAAGCCGGGGTGAACAAGGGACAAACTGGGTC...CCCTTCTTGACACACTGTGATCTCTCTCTCTCTCATTTGTTTGGTCATTGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372301.2
CDS-3UTR CAA 90 bp AATGACCAAACAAATGAGAGAGAGAGAGATCACAGTGTGTCAAGAAGGGCAGCAAGAGGCCCTGCAGCCTaGTCCCTACTCCAAGGTCTT +
Preference number: 5 (lower is better)
Translates to: NDQTNERERDHSVSRRAARGPAA*SLLQGL
Trigger: AAGACCTTGGAGTAGGGACAAGGCTGCAGGGCCTCT...TGCTGCCCTTCTTGACACACTGTGATCTCTCTCTCTCTCATTTGTTTGGTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp ATGAGAGAAGCAGAGTCAGGTTTCAAGCAGATTGGGGTCAGACAAGCAACCTTGCCTTCTGGTACCTTCTaGAAGGGCTCCCAATGCCAA +
Preference number: 5 (lower is better)
Translates to: MREAESGFKQIGVRQATLPSGTF*KGSQCQ
Trigger: TTGGCATTGGGAGCCCTTCAAGAAGGTACCAGAAGG...CAAGGTTGCTTGTCTGACCCCAATCTGCTTGAAACCTGACTCTGCTTCTCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp GGTCAGACAAGCAACCTTGTATTTCTCAGTCTTGGCTTACCAGTGCTGCTGACTAACCCTCTCCAAGTGTaGACCTTGGAGGCTGTCTCT +
Preference number: 5 (lower is better)
Translates to: GQTSNLVFLSLGLPVLLTNPLQV*TLEAVS
Trigger: AGAGACAGCCTCCAAGGTCAACACTTGGAGAGGGTT...AGTCAGCAGCACTGGTAAGCCAAGACTGAGAAATACAAGGTTGCTTGTCTGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp AAGGTTCTGAGAGATCTGGGGAGAGATGAGTTAGACCGTGTATACTGCACATGCAACCCTCTCCAAGTGTaGACCTTGGAGGCTGTCTCT +
Preference number: 5 (lower is better)
Translates to: KVLRDLGRDELDRVYCTCNPLQV*TLEAVS
Trigger: AGAGACAGCCTCCAAGGTCAACACTTGGAGAGGGTT...GCATGTGCAGTATACACGGTCTAACTCATCTCTCCCCAGATCTCTCAGAACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp ACCCTCAATGACCAAACAAATGAGAGAGAGAGAGATCACAGTGTGTCAAGAAGGAAGCCTGATGCTGACTaGAAGGCATGGGAGAGGGCG +
Preference number: 5 (lower is better)
Translates to: TLNDQTNERERDHSVSRRKPDAD*KAWERA
Trigger: CGCCCTCTCCCATGCCTTCAAGTCAGCATCAGGCTT...CCTTCTTGACACACTGTGATCTCTCTCTCTCTCATTTGTTTGGTCATTGAGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp TTAGACCGTGTATACTGCACATGCCAGGACAACATGGGAGGATGTAAAGCTTATTTCCAGGGACAACTCTaGAGACCCTCTCCTCCCAGG +
Preference number: 5 (lower is better)
Translates to: LDRVYCTCQDNMGGCKAYFQGQL*RPSPPR
Trigger: CCTGGGAGGAGAGGGTCTCAAGAGTTGTCCCTGGAA...ATAAGCTTTACATCCTCCCATGTTGTCCTGGCATGTGCAGTATACACGGTCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp ATTCCCCGACCCAGAGCCCCTTTAAGGCAGATAATTTGTGCTTTACAAAGACATTTCCAGGGACAACTCTaGAGACCCTCTCCTCCCAGG +
Preference number: 5 (lower is better)
Translates to: IPRPRAPLRQIICALQRHFQGQL*RPSPPR
Trigger: CCTGGGAGGAGAGGGTCTCAAGAGTTGTCCCTGGAA...ATGTCTTTGTAAAGCACAAATTATCTGCCTTAAAGGGGCTCTGGGTCGGGGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp TGGCACTGTCCAAGGAAACCCGAAAGAGGCCCTGCAGCCTTGTCCCTACTCCAAGTTTGTCTGGTTTATTaGCAGGCTGTAGAGATGATA +
Preference number: 5 (lower is better)
Translates to: WHCPRKPERGPAALSLLQVCLVY*QAVEMI
Trigger: TATCATCTCTACAGCCTGCAAATAAACCAGACAAAC...TTGGAGTAGGGACAAGGCTGCAGGGCCTCTTTCGGGTTTCCTTGGACAGTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp ACCAGTCTCCTCACCTGTGAAATGAGAAGTCTGGCCCAGCTACCCTCCAGGGTGGTTTGTCTGGTTTATTaGCAGGCTGTAGAGATGATA +
Preference number: 5 (lower is better)
Translates to: TSLLTCEMRSLAQLPSRVVCLVY*QAVEMI
Trigger: TATCATCTCTACAGCCTGCAAATAAACCAGACAAAC...CACCCTGGAGGGTAGCTGGGCCAGACTTCTCATTTCACAGGTGAGGAGACTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp CTCAGTAACCTCCCTAAAAGGTGGAACAGCACTGAGCTGACCTTTCCCCCAAAAAACATCATGACTAACTaGAGGACAGCCGACCGTTTC +
Preference number: 5 (lower is better)
Translates to: LSNLPKRWNSTELTFPPKNIMTN*RTADRF
Trigger: GAAACGGTCGGCTGTCCTCAAGTTAGTCATGATGTT...TTTTGGGGGAAAGGTCAGCTCAGTGCTGTTCCACCTTTTAGGGAGGTTACTGAG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000247291.8
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp ATTGGGGTCAGACAAGCAACCTTGTATTTCTCAGTCTTGGCTTACCAGTGCTGCTTGGGGCTGCTCTCGTaGGCTTTTCCTTCAAACATC +
Preference number: 5 (lower is better)
Translates to: IGVRQATLYFSVLAYQCCLGLLS*AFPSNI
Trigger: GATGTTTGAAGGAAAAGCCAACGAGAGCAGCCCCAA...GCAGCACTGGTAAGCCAAGACTGAGAAATACAAGGTTGCTTGTCTGACCCCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp TCTTCAGAGCAAGTGAAACCCTCTCCAAGTGTTGACCTTGGAGGCTGTCTCTTCCCTCTAGTTTTTGGTTaGATGTCAGCCCTTCTGCAC +
Preference number: 5 (lower is better)
Translates to: SSEQVKPSPSVDLGGCLFPLVFG*MSALLH
Trigger: GTGCAGAAGGGCTGACATCAAACCAAAAACTAGAGG...GAAGAGACAGCCTCCAAGGTCAACACTTGGAGAGGGTTTCACTTGCTCTGAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp AAGCAGAGTCAGGTTTCAAGCAGATTGGGGTCAGACAAGCAACCTTGTATTTCTCTCCAAGTGTTGACCTaGGAGGCTGTCTCTTCCCAG +
Preference number: 5 (lower is better)
Translates to: KQSQVSSRLGSDKQPCISLQVLT*EAVSSQ
Trigger: CTGGGAAGAGACAGCCTCCAAGGTCAACACTTGGAG...AGAAATACAAGGTTGCTTGTCTGACCCCAATCTGCTTGAAACCTGACTCTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp ACCCTCAATGACCAAACAAATGAGAGAGAGAGAGATCACAGTGTGTCAAGAAGGCTCCAAGTGTTGACCTaGGAGGCTGTCTCTTCCCAG +
Preference number: 5 (lower is better)
Translates to: TLNDQTNERERDHSVSRRLQVLT*EAVSSQ
Trigger: CTGGGAAGAGACAGCCTCCAAGGTCAACACTTGGAG...CCTTCTTGACACACTGTGATCTCTCTCTCTCTCATTTGTTTGGTCATTGAGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp TTCCTGCAGTCTTGTAGAACTGTGGAACTTACTGAAATAAGCCTGACTGGTTCTAAGCCTGATGCTGACTaGAAGGCATGGGAGAGGGCG +
Preference number: 5 (lower is better)
Translates to: FLQSCRTVELTEISLTGSKPDAD*KAWERA
Trigger: CGCCCTCTCCCATGCCTTCAAGTCAGCATCAGGCTT...AGAACCAGTCAGGCTTATTTCAGTAAGTTCCACAGTTCTACAAGACTGCAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp AGTCCAGGGCACCTCCCTCTGGAGATAAGCCTGACCTTGGGCAAGGCACTTAATTTTATCTCATTGTCATaGTCTGGGTCTCACTTTCCT +
Preference number: 5 (lower is better)
Translates to: SPGHLPLEISLTLGKALNFISLS*SGSHFP
Trigger: AGGAAAGTGAGACCCAGACAATGACAATGAGATAAA...ATTAAGTGCCTTGCCCAAGGTCAGGCTTATCTCCAGAGGGAGGTGCCCTGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp AGTCCAGGGCACCTCCCTCTGGAGATAAGCCTGACCTTGGGCAAGGCACTTAATCTAACATTTATCTCATaGTCATTGTCTGGGTCTCAC +
Preference number: 5 (lower is better)
Translates to: SPGHLPLEISLTLGKALNLTFIS*SLSGSH
Trigger: GTGAGACCCAGACAATGACAATGAGATAAATGTTAG...ATTAAGTGCCTTGCCCAAGGTCAGGCTTATCTCCAGAGGGAGGTGCCCTGGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp ACATGCCAGGACAACATGGGAGGATGTAAAGCTTATAATAGCAGGTCAATAAATGACTCTCACCCAGTCTaGGGCCCATCTAGGCCCCCA +
Preference number: 5 (lower is better)
Translates to: TCQDNMGGCKAYNSRSINDSHPV*GPSRPP
Trigger: TGGGGGCCTAGATGGGCCCAAGACTGGGTGAGAGTC...ATTTATTGACCTGCTATTATAAGCTTTACATCCTCCCATGTTGTCCTGGCATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp ATTGGGGTCAGACAAGCAACCTTGTATTTCTCAGTCTTGGCTTACCAGTGCTGCTGTCCACTTAAGGTGTaGCAAAGGCTCTGCCAAGAC +
Preference number: 5 (lower is better)
Translates to: IGVRQATLYFSVLAYQCCCPLKV*QRLCQD
Trigger: GTCTTGGCAGAGCCTTTGCAACACCTTAAGTGGACA...GCAGCACTGGTAAGCCAAGACTGAGAAATACAAGGTTGCTTGTCTGACCCCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp TCCTGTCCACTTAAGGTGTTGCAAAGGCTCTGCCAAGACTCTCACCCAGTCTTGTCAGAAAGAAGATGGTaGAAGTCCCAAGAAGCTGAG +
Preference number: 5 (lower is better)
Translates to: SCPLKVLQRLCQDSHPVLSERRW*KSQEAE
Trigger: CTCAGCTTCTTGGGACTTCAACCATCTTCTTTCTGA...CAAGACTGGGTGAGAGTCTTGGCAGAGCCTTTGCAACACCTTAAGTGGACAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp AAGCAGATTGGGGTCAGACAAGCAACCTTGTATTTCTCAGTCTTGGCTTACCAGGGGACAAAGCCATACTaGGCAGTCCTCACGTTACTG +
Preference number: 5 (lower is better)
Translates to: KQIGVRQATLYFSVLAYQGTKPY*AVLTLL
Trigger: CAGTAACGTGAGGACTGCCAAGTATGGCTTTGTCCC...CTGGTAAGCCAAGACTGAGAAATACAAGGTTGCTTGTCTGACCCCAATCTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp ACATGCCAGGACAACATGGGAGGATGTAAAGCTTATAATAGCAGGTCAATAAATCACAGAAACTCCCGGTaGATCTCGGCCAGCCTCCTC +
Preference number: 5 (lower is better)
Translates to: TCQDNMGGCKAYNSRSINHRNSR*ISASLL
Trigger: GAGGAGGCTGGCCGAGATCAACCGGGAGTTTCTGTG...ATTTATTGACCTGCTATTATAAGCTTTACATCCTCCCATGTTGTCCTGGCATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372298.1
ENST00000372300.5
ENST00000372302.5
ENST00000372314.3
CDS-3UTR CAA 90 bp TCCTGTCCACTTAAGGTGTTGCAAAGGCTCTGCCAAGACTCTCACCCAGTCTTGTCCATGTACTTCTCTTaGAAGGCTGTGAGCTTTTCT +
Preference number: 5 (lower is better)
Translates to: SCPLKVLQRLCQDSHPVLSMYFS*KAVSFS
Trigger: AGAAAAGCTCACAGCCTTCAAAGAGAAGTACATGGA...CAAGACTGGGTGAGAGTCTTGGCAGAGCCTTTGCAACACCTTAAGTGGACAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp TGCATTAGGGTTCTAAAATCCTGCGAGTCCATAAGAAAGGACACAGGTGACCCCAACATCATGACTAACTaGAGGACAGCCGACCGTTTC +
Preference number: 5 (lower is better)
Translates to: CIRVLKSCESIRKDTGDPNIMTN*RTADRF
Trigger: GAAACGGTCGGCTGTCCTCAAGTTAGTCATGATGTT...GGGGTCACCTGTGTCCTTTCTTATGGACTCGCAGGATTTTAGAACCCTAATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000247291.8
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp AGAGATGAGTTAGACCGTGTATACTGCACATGCCAGGACAACATGGGAGGATGTCCTCTAGTTTTTGGTTaGATGTCAGCCCTTCTGCAC +
Preference number: 5 (lower is better)
Translates to: RDELDRVYCTCQDNMGGCPLVFG*MSALLH
Trigger: GTGCAGAAGGGCTGACATCAAACCAAAAACTAGAGG...ACATCCTCCCATGTTGTCCTGGCATGTGCAGTATACACGGTCTAACTCATCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp ATGAGAGAAGCAGAGTCAGGTTTCAAGCAGATTGGGGTCAGACAAGCAACCTTGTCAGTGAGCCTGAACTaGGCTTGGAGACTTTCTGAA +
Preference number: 5 (lower is better)
Translates to: MREAESGFKQIGVRQATLSVSLN*AWRLSE
Trigger: TTCAGAAAGTCTCCAAGCCAAGTTCAGGCTCACTGA...CAAGGTTGCTTGTCTGACCCCAATCTGCTTGAAACCTGACTCTGCTTCTCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp AAGGTTCTGAGAGATCTGGGGAGAGATGAGTTAGACCGTGTATACTGCACATGCTCAGTGAGCCTGAACTaGGCTTGGAGACTTTCTGAA +
Preference number: 5 (lower is better)
Translates to: KVLRDLGRDELDRVYCTCSVSLN*AWRLSE
Trigger: TTCAGAAAGTCTCCAAGCCAAGTTCAGGCTCACTGA...GCATGTGCAGTATACACGGTCTAACTCATCTCTCCCCAGATCTCTCAGAACCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp AGAGATGAGTTAGACCGTGTATACTGCACATGCCAGGACAACATGGGAGGATGTTCAGTGAGCCTGAACTaGGCTTGGAGACTTTCTGAA +
Preference number: 5 (lower is better)
Translates to: RDELDRVYCTCQDNMGGCSVSLN*AWRLSE
Trigger: TTCAGAAAGTCTCCAAGCCAAGTTCAGGCTCACTGA...ACATCCTCCCATGTTGTCCTGGCATGTGCAGTATACACGGTCTAACTCATCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp AAGCAGAGTCAGGTTTCAAGCAGATTGGGGTCAGACAAGCAACCTTGTATTTCTCCTTCTGGTACCTTCTaGAAGGGCTCCCAATGCCAA +
Preference number: 5 (lower is better)
Translates to: KQSQVSSRLGSDKQPCISPSGTF*KGSQCQ
Trigger: TTGGCATTGGGAGCCCTTCAAGAAGGTACCAGAAGG...AGAAATACAAGGTTGCTTGTCTGACCCCAATCTGCTTGAAACCTGACTCTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp AAGCAGAGTCAGGTTTCAAGCAGATTGGGGTCAGACAAGCAACCTTGTATTTCTAACCCTCTCCAAGTGTaGACCTTGGAGGCTGTCTCT +
Preference number: 5 (lower is better)
Translates to: KQSQVSSRLGSDKQPCISNPLQV*TLEAVS
Trigger: AGAGACAGCCTCCAAGGTCAACACTTGGAGAGGGTT...AGAAATACAAGGTTGCTTGTCTGACCCCAATCTGCTTGAAACCTGACTCTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp AGAGAGAGATCACAGTGTGTCAAGAAGGGCAGCAAGATCGGGAGGGAGGTATGGTTTATCTCATTGTCATaGTCTGGGTCTCACTTTCCT +
Preference number: 5 (lower is better)
Translates to: RERSQCVKKGSKIGREVWFISLS*SGSHFP
Trigger: AGGAAAGTGAGACCCAGACAATGACAATGAGATAAA...CCATACCTCCCTCCCGATCTTGCTGCCCTTCTTGACACACTGTGATCTCTCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp CCCTCAATGACCAAACAAATGAGAGAGAGAGAGATCACAGTGTGTCAAGAAGGGTGTCCACTTAAGGTGTaGCAAAGGCTCTGCCAAGAC +
Preference number: 5 (lower is better)
Translates to: PSMTKQMREREITVCQEGCPLKV*QRLCQD
Trigger: GTCTTGGCAGAGCCTTTGCAACACCTTAAGTGGACA...CCCTTCTTGACACACTGTGATCTCTCTCTCTCTCATTTGTTTGGTCATTGAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp CTCATTCCTGAACTGGTTGAAACCAGTGGGTTAACCCAACCTGGCCATTTCCTCTCAGAAAGAAGATGGTaGAAGTCCCAAGAAGCTGAG +
Preference number: 5 (lower is better)
Translates to: LIPELVETSGLTQPGHFLSERRW*KSQEAE
Trigger: CTCAGCTTCTTGGGACTTCAACCATCTTCTTTCTGA...GAGGAAATGGCCAGGTTGGGTTAACCCACTGGTTTCAACCAGTTCAGGAATGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp ATGACCAAACAAATGAGAGAGAGAGAGATCACAGTGTGTCAAGAAGGGCAGCAAGGGACAAAGCCATACTaGGCAGTCCTCACGTTACTG +
Preference number: 5 (lower is better)
Translates to: MTKQMREREITVCQEGQQGTKPY*AVLTLL
Trigger: CAGTAACGTGAGGACTGCCAAGTATGGCTTTGTCCC...TTGCTGCCCTTCTTGACACACTGTGATCTCTCTCTCTCTCATTTGTTTGGTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp AAGCAGATTGGGGTCAGACAAGCAACCTTGTATTTCTCAGTCTTGGCTTACCAGTTCATCCACCTGAATTaGCCCGACAAACCCTCCTCT +
Preference number: 5 (lower is better)
Translates to: KQIGVRQATLYFSVLAYQFIHLN*PDKPSS
Trigger: AGAGGAGGGTTTGTCGGGCAAATTCAGGTGGATGAA...CTGGTAAGCCAAGACTGAGAAATACAAGGTTGCTTGTCTGACCCCAATCTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp TGCATTAGGGTTCTAAAATCCTGCGAGTCCATAAGAAAGGACACAGGTGACCCCTCAATCTCGCCTTCATaGTTCAGGTCAAACTCCATG +
Preference number: 5 (lower is better)
Translates to: CIRVLKSCESIRKDTGDPSISPS*FRSNSM
Trigger: CATGGAGTTTGACCTGAACAATGAAGGCGAGATTGA...GGGGTCACCTGTGTCCTTTCTTATGGACTCGCAGGATTTTAGAACCCTAATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372298.1
ENST00000372300.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp ATTGGGGTCAGACAAGCAACCTTGTATTTCTCAGTCTTGGCTTACCAGTGCTGCGTCAGACAAGCAACCTaGTATTTCTCAGTCTTGGCT +
Preference number: 5 (lower is better)
Translates to: IGVRQATLYFSVLAYQCCVRQAT*YFSVLA
Trigger: AGCCAAGACTGAGAAATACAAGGTTGCTTGTCTGAC...GCAGCACTGGTAAGCCAAGACTGAGAAATACAAGGTTGCTTGTCTGACCCCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000247291.8
ENST00000372298.1
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp ACCAGTGCTGCTGACTTTGCCGTGAGCATTTTACTCCTCATTCTCCCATCCTGGCTAACATTTATCTCATaGTCATTGTCTGGGTCTCAC +
Preference number: 5 (lower is better)
Translates to: TSAADFAVSILLLILPSWLTFIS*SLSGSH
Trigger: GTGAGACCCAGACAATGACAATGAGATAAATGTTAG...CCAGGATGGGAGAATGAGGAGTAAAATGCTCACGGCAAAGTCAGCAGCACTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp GGTCAGACAAGCAACCTTGTATTTCTCAGTCTTGGCTTACCAGTGCTGCTGACTTCCATGTACTTCTCTTaGAAGGCTGTGAGCTTTTCT +
Preference number: 5 (lower is better)
Translates to: GQTSNLVFLSLGLPVLLTSMYFS*KAVSFS
Trigger: AGAAAAGCTCACAGCCTTCAAAGAGAAGTACATGGA...AGTCAGCAGCACTGGTAAGCCAAGACTGAGAAATACAAGGTTGCTTGTCTGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000247291.8
ENST00000372298.1
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp GCAGAGTCAGGTTTCAAGCAGATTGGGGTCAGACAAGCAACCTTGTATTTCTCATCAATCTCGCCTTCATaGTTCAGGTCAAACTCCATG +
Preference number: 5 (lower is better)
Translates to: AESGFKQIGVRQATLYFSSISPS*FRSNSM
Trigger: CATGGAGTTTGACCTGAACAATGAAGGCGAGATTGA...TGAGAAATACAAGGTTGCTTGTCTGACCCCAATCTGCTTGAAACCTGACTCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372298.1
ENST00000372300.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp ACCGTGTATACTGCACATGCCAGGACAACATGGGAGGATGTAAAGCTTATAATATTGGGGCTGCTCTCGTaGGCTTTTCCTTCAAACATC +
Preference number: 5 (lower is better)
Translates to: TVYTAHARTTWEDVKLIILGLLS*AFPSNI
Trigger: GATGTTTGAAGGAAAAGCCAACGAGAGCAGCCCCAA...TATTATAAGCTTTACATCCTCCCATGTTGTCCTGGCATGTGCAGTATACACGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp TTTCAAGCAGATTGGGGTCAGACAAGCAACCTTGTATTTCTCAGTCTTGGCTTATTGGGGCTGCTCTCGTaGGCTTTTCCTTCAAACATC +
Preference number: 5 (lower is better)
Translates to: FQADWGQTSNLVFLSLGLLGLLS*AFPSNI
Trigger: GATGTTTGAAGGAAAAGCCAACGAGAGCAGCCCCAA...TAAGCCAAGACTGAGAAATACAAGGTTGCTTGTCTGACCCCAATCTGCTTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp ATTGTCATTGTCTGGGTCTCACTTTCCTATTGGACTCTAAGTTCCATGAATCTGCCTTCTGGTACCTTCTaGAAGGGCTCCCAATGCCAA +
Preference number: 5 (lower is better)
Translates to: IVIVWVSLSYWTLSSMNLPSGTF*KGSQCQ
Trigger: TTGGCATTGGGAGCCCTTCAAGAAGGTACCAGAAGG...CAGATTCATGGAACTTAGAGTCCAATAGGAAAGTGAGACCCAGACAATGACAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp CTAAAATCCTGCGAGTCCATAAGAAAGGACACAGGTGACCCCAGTTCAATTCCCGGTCTCACTTTCCTATaGGACTCTAAGTTCCATGAA +
Preference number: 5 (lower is better)
Translates to: LKSCESIRKDTGDPSSIPGLTFL*DSKFHE
Trigger: TTCATGGAACTTAGAGTCCAATAGGAAAGTGAGACC...GGGAATTGAACTGGGGTCACCTGTGTCCTTTCTTATGGACTCGCAGGATTTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp ATGAGAGAAGCAGAGTCAGGTTTCAAGCAGATTGGGGTCAGACAAGCAACCTTGGGTCTCACTTTCCTATaGGACTCTAAGTTCCATGAA +
Preference number: 5 (lower is better)
Translates to: MREAESGFKQIGVRQATLGLTFL*DSKFHE
Trigger: TTCATGGAACTTAGAGTCCAATAGGAAAGTGAGACC...CAAGGTTGCTTGTCTGACCCCAATCTGCTTGAAACCTGACTCTGCTTCTCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp CTCATTCCTGAACTGGTTGAAACCAGTGGGTTAACCCAACCTGGCCATTTCCTCTTTATCTCATTGTCATaGTCTGGGTCTCACTTTCCT +
Preference number: 5 (lower is better)
Translates to: LIPELVETSGLTQPGHFLFISLS*SGSHFP
Trigger: AGGAAAGTGAGACCCAGACAATGACAATGAGATAAA...GAGGAAATGGCCAGGTTGGGTTAACCCACTGGTTTCAACCAGTTCAGGAATGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp TGCACATGCCAGGACAACATGGGAGGATGTAAAGCTTATAATAGCAGGTCAATATGTCCACTTAAGGTGTaGCAAAGGCTCTGCCAAGAC +
Preference number: 5 (lower is better)
Translates to: CTCQDNMGGCKAYNSRSICPLKV*QRLCQD
Trigger: GTCTTGGCAGAGCCTTTGCAACACCTTAAGTGGACA...TATTGACCTGCTATTATAAGCTTTACATCCTCCCATGTTGTCCTGGCATGTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp AAACCCTCAATGACCAAACAAATGAGAGAGAGAGAGATCACAGTGTGTCAAGAAGGGACAAAGCCATACTaGGCAGTCCTCACGTTACTG +
Preference number: 5 (lower is better)
Translates to: KPSMTKQMREREITVCQEGTKPY*AVLTLL
Trigger: CAGTAACGTGAGGACTGCCAAGTATGGCTTTGTCCC...TTCTTGACACACTGTGATCTCTCTCTCTCTCATTTGTTTGGTCATTGAGGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp CAAACCCTCAATGACCAAACAAATGAGAGAGAGAGAGATCACAGTGTGTCAAGATTCATCCACCTGAATTaGCCCGACAAACCCTCCTCT +
Preference number: 5 (lower is better)
Translates to: QTLNDQTNERERDHSVSRFIHLN*PDKPSS
Trigger: AGAGGAGGGTTTGTCGGGCAAATTCAGGTGGATGAA...TCTTGACACACTGTGATCTCTCTCTCTCTCATTTGTTTGGTCATTGAGGGTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp AGATTGGGGTCAGACAAGCAACCTTGTATTTCTCAGTCTTGGCTTACCAGTGCTTCCATGTACTTCTCTTaGAAGGCTGTGAGCTTTTCT +
Preference number: 5 (lower is better)
Translates to: RLGSDKQPCISQSWLTSASMYFS*KAVSFS
Trigger: AGAAAAGCTCACAGCCTTCAAAGAGAAGTACATGGA...AGCACTGGTAAGCCAAGACTGAGAAATACAAGGTTGCTTGTCTGACCCCAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000247291.8
ENST00000372298.1
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp TCCCCGACCCAGAGCCCCTTTAAGGCAGATAATTTGTGCTTTACAAAGACATTGTCCATGTACTTCTCTTaGAAGGCTGTGAGCTTTTCT +
Preference number: 5 (lower is better)
Translates to: SPTQSPFKADNLCFTKTLSMYFS*KAVSFS
Trigger: AGAAAAGCTCACAGCCTTCAAAGAGAAGTACATGGA...CAATGTCTTTGTAAAGCACAAATTATCTGCCTTAAAGGGGCTCTGGGTCGGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp AATGACCAAACAAATGAGAGAGAGAGAGATCACAGTGTGTCAAGAAGGGCAGCATCAATCTCGCCTTCATaGTTCAGGTCAAACTCCATG +
Preference number: 5 (lower is better)
Translates to: NDQTNERERDHSVSRRAASISPS*FRSNSM
Trigger: CATGGAGTTTGACCTGAACAATGAAGGCGAGATTGA...TGCTGCCCTTCTTGACACACTGTGATCTCTCTCTCTCTCATTTGTTTGGTCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372301.2
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp TCCTCCCTTAAGGAGAATTCCTGCAGTCTTGTAGAACTGTGGAACTTACTGAAAAACATCATGACTAACTaGAGGACAGCCGACCGTTTC +
Preference number: 5 (lower is better)
Translates to: SSLKENSCSLVELWNLLKNIMTN*RTADRF
Trigger: GAAACGGTCGGCTGTCCTCAAGTTAGTCATGATGTT...TTTCAGTAAGTTCCACAGTTCTACAAGACTGCAGGAATTCTCCTTAAGGGAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000247291.8
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp AAACCCTCAATGACCAAACAAATGAGAGAGAGAGAGATCACAGTGTGTCAAGAATTGGGGCTGCTCTCGTaGGCTTTTCCTTCAAACATC +
Preference number: 5 (lower is better)
Translates to: KPSMTKQMREREITVCQELGLLS*AFPSNI
Trigger: GATGTTTGAAGGAAAAGCCAACGAGAGCAGCCCCAA...TTCTTGACACACTGTGATCTCTCTCTCTCTCATTTGTTTGGTCATTGAGGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372301.2
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp TTCCTGCAGTCTTGTAGAACTGTGGAACTTACTGAAATAAGCCTGACTGGTTCTTCAGTGAGCCTGAACTaGGCTTGGAGACTTTCTGAA +
Preference number: 5 (lower is better)
Translates to: FLQSCRTVELTEISLTGSSVSLN*AWRLSE
Trigger: TTCAGAAAGTCTCCAAGCCAAGTTCAGGCTCACTGA...AGAACCAGTCAGGCTTATTTCAGTAAGTTCCACAGTTCTACAAGACTGCAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp AGAGATGAGTTAGACCGTGTATACTGCACATGCCAGGACAACATGGGAGGATGTTTTATCTCATTGTCATaGTCTGGGTCTCACTTTCCT +
Preference number: 5 (lower is better)
Translates to: RDELDRVYCTCQDNMGGCFISLS*SGSHFP
Trigger: AGGAAAGTGAGACCCAGACAATGACAATGAGATAAA...ACATCCTCCCATGTTGTCCTGGCATGTGCAGTATACACGGTCTAACTCATCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp AGATTGGGGTCAGACAAGCAACCTTGTATTTCTCAGTCTTGGCTTACCAGTGCTACAGGGAGGAATGTTTaGCTGGGGTTTAAACTTCAA +
Preference number: 5 (lower is better)
Translates to: RLGSDKQPCISQSWLTSATGRNV*LGFKLQ
Trigger: TTGAAGTTTAAACCCCAGCAAAACATTCCTCCCTGT...AGCACTGGTAAGCCAAGACTGAGAAATACAAGGTTGCTTGTCTGACCCCAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp ATGACCAAACAAATGAGAGAGAGAGAGATCACAGTGTGTCAAGAAGGGCAGCAATCAGAAAGAAGATGGTaGAAGTCCCAAGAAGCTGAG +
Preference number: 5 (lower is better)
Translates to: MTKQMREREITVCQEGQQSERRW*KSQEAE
Trigger: CTCAGCTTCTTGGGACTTCAACCATCTTCTTTCTGA...TTGCTGCCCTTCTTGACACACTGTGATCTCTCTCTCTCTCATTTGTTTGGTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp AATGTTTTGCTGGGGTTTAAACTTCAACTAGGCCTGTGTGCATTTGAAGCAGATTTCATCCACCTGAATTaGCCCGACAAACCCTCCTCT +
Preference number: 5 (lower is better)
Translates to: NVLLGFKLQLGLCAFEADFIHLN*PDKPSS
Trigger: AGAGGAGGGTTTGTCGGGCAAATTCAGGTGGATGAA...ATCTGCTTCAAATGCACACAGGCCTAGTTGAAGTTTAAACCCCAGCAAAACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp TCAATGACCAAACAAATGAGAGAGAGAGAGATCACAGTGTGTCAAGAAGGGCAGTCCATGTACTTCTCTTaGAAGGCTGTGAGCTTTTCT +
Preference number: 5 (lower is better)
Translates to: SMTKQMREREITVCQEGQSMYFS*KAVSFS
Trigger: AGAAAAGCTCACAGCCTTCAAAGAGAAGTACATGGA...CTGCCCTTCTTGACACACTGTGATCTCTCTCTCTCTCATTTGTTTGGTCATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372301.2
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp AAACCCTCAATGACCAAACAAATGAGAGAGAGAGAGATCACAGTGTGTCAAGAAAACATCATGACTAACTaGAGGACAGCCGACCGTTTC +
Preference number: 5 (lower is better)
Translates to: KPSMTKQMREREITVCQENIMTN*RTADRF
Trigger: GAAACGGTCGGCTGTCCTCAAGTTAGTCATGATGTT...TTCTTGACACACTGTGATCTCTCTCTCTCTCATTTGTTTGGTCATTGAGGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372301.2
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp AAACAAACCCTCAATGACCAAACAAATGAGAGAGAGAGAGATCACAGTGTGTCACCTCTAGTTTTTGGTTaGATGTCAGCCCTTCTGCAC +
Preference number: 5 (lower is better)
Translates to: KQTLNDQTNERERDHSVSPLVFG*MSALLH
Trigger: GTGCAGAAGGGCTGACATCAAACCAAAAACTAGAGG...TGACACACTGTGATCTCTCTCTCTCTCATTTGTTTGGTCATTGAGGGTTTGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp ATTGTCATTGTCTGGGTCTCACTTTCCTATTGGACTCTAAGTTCCATGAATCTGCCTCTAGTTTTTGGTTaGATGTCAGCCCTTCTGCAC +
Preference number: 5 (lower is better)
Translates to: IVIVWVSLSYWTLSSMNLPLVFG*MSALLH
Trigger: GTGCAGAAGGGCTGACATCAAACCAAAAACTAGAGG...CAGATTCATGGAACTTAGAGTCCAATAGGAAAGTGAGACCCAGACAATGACAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp TATACTGCACATGCCAGGACAACATGGGAGGATGTAAAGCTTATAATAGCAGGTGTCAGACAAGCAACCTaGTATTTCTCAGTCTTGGCT +
Preference number: 5 (lower is better)
Translates to: YTAHARTTWEDVKLIIAGVRQAT*YFSVLA
Trigger: AGCCAAGACTGAGAAATACAAGGTTGCTTGTCTGAC...ACCTGCTATTATAAGCTTTACATCCTCCCATGTTGTCCTGGCATGTGCAGTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000247291.8
ENST00000372298.1
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp ACCGTGTATACTGCACATGCCAGGACAACATGGGAGGATGTAAAGCTTATAATAGTCAGACAAGCAACCTaGTATTTCTCAGTCTTGGCT +
Preference number: 5 (lower is better)
Translates to: TVYTAHARTTWEDVKLIIVRQAT*YFSVLA
Trigger: AGCCAAGACTGAGAAATACAAGGTTGCTTGTCTGAC...TATTATAAGCTTTACATCCTCCCATGTTGTCCTGGCATGTGCAGTATACACGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000247291.8
ENST00000372298.1
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp ATGACCAAACAAATGAGAGAGAGAGAGATCACAGTGTGTCAAGAAGGGCAGCAAGGTCTCACTTTCCTATaGGACTCTAAGTTCCATGAA +
Preference number: 5 (lower is better)
Translates to: MTKQMREREITVCQEGQQGLTFL*DSKFHE
Trigger: TTCATGGAACTTAGAGTCCAATAGGAAAGTGAGACC...TTGCTGCCCTTCTTGACACACTGTGATCTCTCTCTCTCTCATTTGTTTGGTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp AAGCAGAGTCAGGTTTCAAGCAGATTGGGGTCAGACAAGCAACCTTGTATTTCTGGTCTCACTTTCCTATaGGACTCTAAGTTCCATGAA +
Preference number: 5 (lower is better)
Translates to: KQSQVSSRLGSDKQPCISGLTFL*DSKFHE
Trigger: TTCATGGAACTTAGAGTCCAATAGGAAAGTGAGACC...AGAAATACAAGGTTGCTTGTCTGACCCCAATCTGCTTGAAACCTGACTCTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp TTTCAAGCAGATTGGGGTCAGACAAGCAACCTTGTATTTCTCAGTCTTGGCTTATCAGAAAGAAGATGGTaGAAGTCCCAAGAAGCTGAG +
Preference number: 5 (lower is better)
Translates to: FQADWGQTSNLVFLSLGLSERRW*KSQEAE
Trigger: CTCAGCTTCTTGGGACTTCAACCATCTTCTTTCTGA...TAAGCCAAGACTGAGAAATACAAGGTTGCTTGTCTGACCCCAATCTGCTTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp ACATGCCAGGACAACATGGGAGGATGTAAAGCTTATAATAGCAGGTCAATAAATCCTCTAGTTTTTGGTTaGATGTCAGCCCTTCTGCAC +
Preference number: 5 (lower is better)
Translates to: TCQDNMGGCKAYNSRSINPLVFG*MSALLH
Trigger: GTGCAGAAGGGCTGACATCAAACCAAAAACTAGAGG...ATTTATTGACCTGCTATTATAAGCTTTACATCCTCCCATGTTGTCCTGGCATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000247291.8
ENST00000372300.5
ENST00000372302.5
ENST00000372309.7
ENST00000372314.3
CDS-3UTR CAA 90 bp AAACAAACCCTCAATGACCAAACAAATGAGAGAGAGAGAGATCACAGTGTGTCAGTCAGACAAGCAACCTaGTATTTCTCAGTCTTGGCT +
Preference number: 5 (lower is better)
Translates to: KQTLNDQTNERERDHSVSVRQAT*YFSVLA
Trigger: AGCCAAGACTGAGAAATACAAGGTTGCTTGTCTGAC...TGACACACTGTGATCTCTCTCTCTCTCATTTGTTTGGTCATTGAGGGTTTGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000247291.8