RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AGAP2 (Homo sapiens)

Ensembl gene IDs: ENSG00000135439

Ensembl transcript IDs: ENST00000257897.7, ENST00000328568.9, ENST00000547588.6, ENST00000549129.1

Found 568 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ATCGGAGAGGTGAGTGGGTGCGTCTGTCCAGCGGTCCGCCCGGTGTaGTCGTGCCCGGCCCGCGTGGGGATGGGGGTGTCTCTCCCGCTG +
Preference number: 1 (lower is better)
Translates to: IGEVSGCVCPAVRPV*SCPARVGMGVSLPL
Trigger: CAGCGGGAGAGACACCCCCATCCCCACGCGGGCCGGGCACGACCACACCGGGCGGACCGCTGGACAGACGCACCCACTCACCTCTCCGAT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
3UTR CCA 90 bp GTAGGAAGTGCTCCCGTGGGGCGGGGTGCGGATCGGAGAGGTGAGTaGGTGCGTCTGTCCAGCGGTCCGCCCGGTGTGGTCGTGCCCGGC +
Preference number: 1 (lower is better)
Translates to: VGSAPVGRGADRRGE*VRLSSGPPGVVVPG
Trigger: GCCGGGCACGACCACACCGGGCGGACCGCTGGACAGACGCACCCACTCACCTCTCCGATCCGCACCCCGCCCCACGGGAGCACTTCCTAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
3UTR CCA 90 bp AACCCTCCCTCTGGCGTGGCGTCGCCCCAGGAGCCAGCCTGGGTATaGGCTCCCGCCCTGGGATTGTTGAGCTCGGGCAGGACCGGGTCT +
Preference number: 1 (lower is better)
Translates to: NPPSGVASPQEPAWV*APALGLLSSGRTGS
Trigger: AGACCCGGTCCTGCCCGAGCTCAACAATCCCAGGGCGGGAGCCCATACCCAGGCTGGCTCCTGGGGCGACGCCACGCCAGAGGGAGGGTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
3UTR CCA 90 bp GTACTAAACCCTCCCTCTGGCGTGGCGTCGCCCCAGGAGCCAGCCTaGGTATGGGCTCCCGCCCTGGGATTGTTGAGCTCGGGCAGGACC +
Preference number: 1 (lower is better)
Translates to: VLNPPSGVASPQEPA*VWAPALGLLSSGRT
Trigger: GGTCCTGCCCGAGCTCAACAATCCCAGGGCGGGAGCCCATACCCAGGCTGGCTCCTGGGGCGACGCCACGCCAGAGGGAGGGTTTAGTAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
3UTR CCA 90 bp CGAATCCTCTCAGCCCTGGCTGGGAGAGGTCACGGGGGTGAGGAATaGCTCTGGAGCTGCTCCAGTGGGAGGGAGGGGCTGGACAGAAAG +
Preference number: 1 (lower is better)
Translates to: RILSALAGRGHGGEE*LWSCSSGREGLDRK
Trigger: CTTTCTGTCCAGCCCCTCCCTCCCACTGGAGCAGCTCCAGAGCCATTCCTCACCCCCGTGACCTCTCCCAGCCAGGGCTGAGAGGATTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
3UTR TCA 90 bp GGGAGGCACCTCTGCCTGTCCCTGTCCAACCCCAGTACCCCATCTTaGCCAAGGCCATGCCCTGACCTGCCTCCAAGAACAGACCAGCAG +
Preference number: 1 (lower is better)
Translates to: GRHLCLSLSNPSTPS*PRPCPDLPPRTDQQ
Trigger: CTGCTGGTCTGTTCTTGGAGGCAGGTCAGGGCATGGCCTTGGTCAAGATGGGGTACTGGGGTTGGACAGGGACAGGCAGAGGTGCCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257897.7
3UTR CCA 90 bp GTGCTCACGGTGAGCAGGCTGGCTCGGGGCAGCCCTCCTCAGAGCTaGAGCGCCTTTCAGGTGCCCTCTGAACAGATACTGTTCAGAATA +
Preference number: 1 (lower is better)
Translates to: VLTVSRLARGSPPQS*SAFQVPSEQILFRI
Trigger: TATTCTGAACAGTATCTGTTCAGAGGGCACCTGAAAGGCGCTCCAGCTCTGAGGAGGGCTGCCCCGAGCCAGCCTGCTCACCGTGAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257897.7
3UTR TCA 90 bp CTGGGTGGTCACAGCCTAGGACCCTGTAGAGCCGCAGCCTCCATGTaGACTGGATTCAGGTCTGGTGCTGTGTCCTCAGTTCAGTGGCAC +
Preference number: 1 (lower is better)
Translates to: LGGHSLGPCRAAASM*TGFRSGAVSSVQWH
Trigger: GTGCCACTGAACTGAGGACACAGCACCAGACCTGAATCCAGTTCACATGGAGGCTGCGGCTCTACAGGGTCCTAGGCTGTGACCACCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257897.7
3UTR CCA 90 bp ATGAACCCAGAACTGTTGTACATGATGGAACCACCTCCATGCCCATaGGTACTGTCCTGCCACCAGCCCCAGTGGGAGGCACCTCTGCCT +
Preference number: 1 (lower is better)
Translates to: MNPELLYMMEPPPCP*VLSCHQPQWEAPLP
Trigger: AGGCAGAGGTGCCTCCCACTGGGGCTGGTGGCAGGACAGTACCCATGGGCATGGAGGTGGTTCCATCATGTACAACAGTTCTGGGTTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257897.7
3UTR CCA 90 bp CAGCTGACACTGAGTTTGTGGACACCAGGGACCTCTGCAGCTAGCTaGGAAATCTTTCCCAGGAGGTCTCCCACCCCTTCCCTCTGGAAC +
Preference number: 1 (lower is better)
Translates to: QLTLSLWTPGTSAAS*EIFPRRSPTPSLWN
Trigger: GTTCCAGAGGGAAGGGGTGGGAGACCTCCTGGGAAAGATTTCCCAGCTAGCTGCAGAGGTCCCTGGTGTCCACAAACTCAGTGTCAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257897.7
3UTR GCA 90 bp AAAGCAATAAATTACAAGGCCCCCGCAGCCCTCTTAGCCCGCTCCTaGTCCATCCCTTCTCCCTCCCAAGATAGTAGTGGGAGGGACCCA +
Preference number: 1 (lower is better)
Translates to: KAINYKAPAALLARS*SIPSPSQDSSGRDP
Trigger: TGGGTCCCTCCCACTACTATCTTGGGAGGGAGAAGGGATGGAGCAGGAGCGGGCTAAGAGGGCTGCGGGGGCCTTGTAATTTATTGCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
3UTR GCA 90 bp CACTACATGAACCCAGAACTGTTGTACATGATGGAACCACCTCCATaGCCATGGGTACTGTCCTGCCACCAGCCCCAGTGGGAGGCACCT +
Preference number: 1 (lower is better)
Translates to: HYMNPELLYMMEPPP*PWVLSCHQPQWEAP
Trigger: AGGTGCCTCCCACTGGGGCTGGTGGCAGGACAGTACCCATGGGCATGGAGGTGGTTCCATCATGTACAACAGTTCTGGGTTCATGTAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257897.7
3UTR GCA 90 bp CGCTGTGGCCTTGGTGGTCCCTTTGATGGCACGGAGGTGGATAAATaGCTGCATCAGCTGACACTGAGTTTGTGGACACCAGGGACCTCT +
Preference number: 1 (lower is better)
Translates to: RCGLGGPFDGTEVDK*LHQLTLSLWTPGTS
Trigger: AGAGGTCCCTGGTGTCCACAAACTCAGTGTCAGCTGATGCAGGCATTTATCCACCTCCGTGCCATCAAAGGGACCACCAAGGCCACAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257897.7
3UTR TCA 90 bp TTCAGGTCTGGTGCTGTGTCCTCAGTTCAGTGGCACACTTGCAGCTaGACCTCTTGGGGCTGGTGGGCACCAAGGGTCAGAAGCAATTCT +
Preference number: 1 (lower is better)
Translates to: FRSGAVSSVQWHTCS*TSWGWWAPRVRSNS
Trigger: AGAATTGCTTCTGACCCTTGGTGCCCACCAGCCCCAAGAGGTTCAGCTGCAAGTGTGCCACTGAACTGAGGACACAGCACCAGACCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257897.7
3UTR CCA 90 bp GGCACGGAGGTGGATAAATGCCTGCATCAGCTGACACTGAGTTTGTaGACACCAGGGACCTCTGCAGCTAGCTGGGAAATCTTTCCCAGG +
Preference number: 1 (lower is better)
Translates to: GTEVDKCLHQLTLSL*TPGTSAASWEIFPR
Trigger: CCTGGGAAAGATTTCCCAGCTAGCTGCAGAGGTCCCTGGTGTCCACAAACTCAGTGTCAGCTGATGCAGGCATTTATCCACCTCCGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257897.7
3UTR TCA 90 bp TCGGGGCAGCCCTCCTCAGAGCTGGAGCGCCTTTCAGGTGCCCTCTaGACAGATACTGTTCAGAATACAGATAAACAGATGCCACCAAGG +
Preference number: 1 (lower is better)
Translates to: SGQPSSELERLSGAL*TDTVQNTDKQMPPR
Trigger: CCTTGGTGGCATCTGTTTATCTGTATTCTGAACAGTATCTGTTCAGAGGGCACCTGAAAGGCGCTCCAGCTCTGAGGAGGGCTGCCCCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257897.7
3UTR-3UTR CCA 90 bp GCTCCCGCCCTGGGATTGTTGAGCTCGGGCAGGACCGGGTCTTCTTTCCGCCCCCGTGCCCGGCCCGCGTaGGGATGGGGGTGTCTCTCC +
Preference number: 2 (lower is better)
Translates to: APALGLLSSGRTGSSFRPRARPA*GWGCLS
Trigger: GGAGAGACACCCCCATCCCCACGCGGGCCGGGCACG...GGGGCGGAAAGAAGACCCGGTCCTGCCCGAGCTCAACAATCCCAGGGCGGGAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
3UTR-3UTR GCA 90 bp GCTCGGGCAGGACCGGGTCTTCTTTCCGCCCCTAGGGGGCACAAGCGGGCATGTGGAGAGGTGAGTGGGTaGGTCTGTCCAGCGGTCCGC +
Preference number: 2 (lower is better)
Translates to: ARAGPGLLSAPRGHKRACGEVSG*VCPAVR
Trigger: GCGGACCGCTGGACAGACGCACCCACTCACCTCTCC...ACATGCCCGCTTGTGCCCCCTAGGGGCGGAAAGAAGACCCGGTCCTGCCCGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
3UTR-3UTR CCA 90 bp GTATGGGCTCCCGCCCTGGGATTGTTGAGCTCGGGCAGGACCGGGTCTTCTTTCCGGCCCGCGTGGGGATaGGGGTGTCTCTCCCGCTGG +
Preference number: 2 (lower is better)
Translates to: VWAPALGLLSSGRTGSSFRPAWG*GCLSRW
Trigger: CCAGCGGGAGAGACACCCCCATCCCCACGCGGGCCG...GAAAGAAGACCCGGTCCTGCCCGAGCTCAACAATCCCAGGGCGGGAGCCCATAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
3UTR-3UTR CCA 90 bp CAGCACCGGCTTCAGGCCGCTGTGGCCTTGGTGGTCCCTTTGATGGCACGGAGGAGGAGCCCGTACCGCTaGGGACCTCCCCTTCCGCGA +
Preference number: 2 (lower is better)
Translates to: QHRLQAAVALVVPLMARRRSPYR*GPPLPR
Trigger: TCGCGGAAGGGGAGGTCCCCAGCGGTACGGGCTCCT...CCTCCGTGCCATCAAAGGGACCACCAAGGCCACAGCGGCCTGAAGCCGGTGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257897.7
3UTR-3UTR CCA 90 bp TTACAAGGCCCCCGCAGCCCTCTTAGCCCGCTCCTGCTCCATCCCTTCTCCCTCAGGAGCCCGTACCGCTaGGGACCTCCCCTTCCGCGA +
Preference number: 2 (lower is better)
Translates to: LQGPRSPLSPLLLHPFSLRSPYR*GPPLPR
Trigger: TCGCGGAAGGGGAGGTCCCCAGCGGTACGGGCTCCT...GAGGGAGAAGGGATGGAGCAGGAGCGGGCTAAGAGGGCTGCGGGGGCCTTGTAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
3UTR-3UTR TCA 90 bp GTGCTGAGCCTAGTGGCACTGCAGCTCATGGAGGCAGCACCGGCTTCAGGCCGCGAGAGGTCACGGGGGTaGGGAATGGCTCTGGAGCTG +
Preference number: 2 (lower is better)
Translates to: VLSLVALQLMEAAPASGRERSRG*GMALEL
Trigger: CAGCTCCAGAGCCATTCCTCACCCCCGTGACCTCTC...GCGGCCTGAAGCCGGTGCTGCCTCCATGAGCTGCAGTGCCACTAGGCTCAGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257897.7
3UTR-3UTR CCA 90 bp CCTGGTTTCCACTACTCACGGTCCCTTTCACGGAAAGGGTTGGGAACCCCCACCCGTGCCCGGCCCGCGTaGGGATGGGGGTGTCTCTCC +
Preference number: 2 (lower is better)
Translates to: PGFHYSRSLSRKGLGTPTRARPA*GWGCLS
Trigger: GGAGAGACACCCCCATCCCCACGCGGGCCGGGCACG...GGTGGGGGTTCCCAACCCTTTCCGTGAAAGGGACCGTGAGTAGTGGAAACCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
3UTR-3UTR CCA 90 bp CCACCTTTCCTGGGTCACGCCGCTGTGCTGGGTGGTCACAGCCTAGGACCCTGTGAGCCAGCCTGGGTATaGGCTCCCGCCCTGGGATTG +
Preference number: 2 (lower is better)
Translates to: PPFLGHAAVLGGHSLGPCEPAWV*APALGL
Trigger: CAATCCCAGGGCGGGAGCCCATACCCAGGCTGGCTC...ACAGGGTCCTAGGCTGTGACCACCCAGCACAGCGGCGTGACCCAGGAAAGGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257897.7
3UTR-3UTR TCA 90 bp TGTGCTGAGCCTAGTGGCACTGCAGCTCATGGAGGCAGCACCGGCTTCAGGCCGTGCGGATCGGAGAGGTaGGTGGGTGCGTCTGTCCAG +
Preference number: 2 (lower is better)
Translates to: CAEPSGTAAHGGSTGFRPCGSER*VGASVQ
Trigger: CTGGACAGACGCACCCACTCACCTCTCCGATCCGCA...CGGCCTGAAGCCGGTGCTGCCTCCATGAGCTGCAGTGCCACTAGGCTCAGCACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257897.7
3UTR-3UTR GCA 90 bp GTATGGGCTCCCGCCCTGGGATTGTTGAGCTCGGGCAGGACCGGGTCTTCTTTCGGAGAGGTGAGTGGGTaGGTCTGTCCAGCGGTCCGC +
Preference number: 2 (lower is better)
Translates to: VWAPALGLLSSGRTGSSFGEVSG*VCPAVR
Trigger: GCGGACCGCTGGACAGACGCACCCACTCACCTCTCC...GAAAGAAGACCCGGTCCTGCCCGAGCTCAACAATCCCAGGGCGGGAGCCCATAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
3UTR-3UTR CCA 90 bp GTACTAAACCCTCCCTCTGGCGTGGCGTCGCCCCAGGAGCCAGCCTGGGTATGGGATCGGAGAGGTGAGTaGGTGCGTCTGTCCAGCGGT +
Preference number: 2 (lower is better)
Translates to: VLNPPSGVASPQEPAWVWDRRGE*VRLSSG
Trigger: ACCGCTGGACAGACGCACCCACTCACCTCTCCGATC...CCATACCCAGGCTGGCTCCTGGGGCGACGCCACGCCAGAGGGAGGGTTTAGTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
3UTR-3UTR CCA 90 bp GTATGGGCTCCCGCCCTGGGATTGTTGAGCTCGGGCAGGACCGGGTCTTCTTTCGTCTTCTGGAAGGCGTaGGGGCTGTGCCCTCGTGGG +
Preference number: 2 (lower is better)
Translates to: VWAPALGLLSSGRTGSSFVFWKA*GLCPRG
Trigger: CCCACGAGGGCACAGCCCCCACGCCTTCCAGAAGAC...GAAAGAAGACCCGGTCCTGCCCGAGCTCAACAATCCCAGGGCGGGAGCCCATAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
3UTR-3UTR CCA 90 bp CCTGGTTTCCACTACTCACGGTCCCTTTCACGGAAAGGGTTGGGAACCCCCACCCCCCAGGAGCCAGCCTaGGTATGGGCTCCCGCCCTG +
Preference number: 2 (lower is better)
Translates to: PGFHYSRSLSRKGLGTPTPQEPA*VWAPAL
Trigger: CAGGGCGGGAGCCCATACCCAGGCTGGCTCCTGGGG...GGTGGGGGTTCCCAACCCTTTCCGTGAAAGGGACCGTGAGTAGTGGAAACCAGG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
3UTR-3UTR CCA 90 bp CCACCCATGGGTAGGTGTAGGGGACGTCCTGGTTTCCACTACTCACGGTCCCTTACCCTCCCTCTGGCGTaGCGTCGCCCCAGGAGCCAG +
Preference number: 2 (lower is better)
Translates to: PPMGRCRGRPGFHYSRSLTLPLA*RRPRSQ
Trigger: CTGGCTCCTGGGGCGACGCCACGCCAGAGGGAGGGT...AAGGGACCGTGAGTAGTGGAAACCAGGACGTCCCCTACACCTACCCATGGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
3UTR-3UTR TCA 90 bp CCCAGATCACCACGGGCGCTGCACAGTCACAGGTACGCAGTCACGGTCACAGACTGCGGATCGGAGAGGTaGGTGGGTGCGTCTGTCCAG +
Preference number: 2 (lower is better)
Translates to: PRSPRALHSHRYAVTVTDCGSER*VGASVQ
Trigger: CTGGACAGACGCACCCACTCACCTCTCCGATCCGCA...GTCTGTGACCGTGACTGCGTACCTGTGACTGTGCAGCGCCCGTGGTGATCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
3UTR-3UTR TCA 90 bp CTGGTTTCCACTACTCACGGTCCCTTTCACGGAAAGGGTTGGGAACCCCCACCCCCGCCCTGGGATTGTTaGGCTCGGGCAGGACCGGGT +
Preference number: 2 (lower is better)
Translates to: LVSTTHGPFHGKGWEPPPPPWDC*ARAGPG
Trigger: ACCCGGTCCTGCCCGAGCTCAACAATCCCAGGGCGG...GGGTGGGGGTTCCCAACCCTTTCCGTGAAAGGGACCGTGAGTAGTGGAAACCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
3UTR-3UTR TCA 90 bp CCTGGTTTCCACTACTCACGGTCCCTTTCACGGAAAGGGTTGGGAACCCCCACCCCGCCCTGGGATTGTTaGGCTCGGGCAGGACCGGGT +
Preference number: 2 (lower is better)
Translates to: PGFHYSRSLSRKGLGTPTPPWDC*ARAGPG
Trigger: ACCCGGTCCTGCCCGAGCTCAACAATCCCAGGGCGG...GGTGGGGGTTCCCAACCCTTTCCGTGAAAGGGACCGTGAGTAGTGGAAACCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
3UTR-3UTR CCA 90 bp TGGCTATGTGCTGAGCCTAGTGGCACTGCAGCTCATGGAGGCAGCACCGGCTTCTGCCACCAGCCCCAGTaGGAGGCACCTCTGCCTGTC +
Preference number: 2 (lower is better)
Translates to: WLCAEPSGTAAHGGSTGFCHQPQ*EAPLPV
Trigger: GACAGGCAGAGGTGCCTCCCACTGGGGCTGGTGGCA...GAAGCCGGTGCTGCCTCCATGAGCTGCAGTGCCACTAGGCTCAGCACATAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257897.7
3UTR-3UTR GCA 90 bp CCCAGATCACCACGGGCGCTGCACAGTCACAGGTACGCAGTCACGGTCACAGACCTCTTAGCCCGCTCCTaGTCCATCCCTTCTCCCTCC +
Preference number: 2 (lower is better)
Translates to: PRSPRALHSHRYAVTVTDLLARS*SIPSPS
Trigger: GGAGGGAGAAGGGATGGAGCAGGAGCGGGCTAAGAG...GTCTGTGACCGTGACTGCGTACCTGTGACTGTGCAGCGCCCGTGGTGATCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
3UTR-3UTR CCA 90 bp TTTAGCTTCCACCCATGGGTAGGTGTAGGGGACGTCCTGGTTTCCACTACTCACCGGCCCGCGTGGGGATaGGGGTGTCTCTCCCGCTGG +
Preference number: 2 (lower is better)
Translates to: FSFHPWVGVGDVLVSTTHRPAWG*GCLSRW
Trigger: CCAGCGGGAGAGACACCCCCATCCCCACGCGGGCCG...GTGAGTAGTGGAAACCAGGACGTCCCCTACACCTACCCATGGGTGGAAGCTAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
3UTR-3UTR CCA 90 bp GGTTTCCACTACTCACGGTCCCTTTCACGGAAAGGGTTGGGAACCCCCACCCCCACTAAACCCTCCCTCTaGCGTGGCGTCGCCCCAGGA +
Preference number: 2 (lower is better)
Translates to: GFHYSRSLSRKGLGTPTPTKPSL*RGVAPG
Trigger: TCCTGGGGCGACGCCACGCCAGAGGGAGGGTTTAGT...GGGGGTGGGGGTTCCCAACCCTTTCCGTGAAAGGGACCGTGAGTAGTGGAAACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
3UTR-3UTR CCA 90 bp TTACAAGGCCCCCGCAGCCCTCTTAGCCCGCTCCTGCTCCATCCCTTCTCCCTCGTAGGGTTTCCGTATTaGCCCCAAGTCCCGGGGCTA +
Preference number: 2 (lower is better)
Translates to: LQGPRSPLSPLLLHPFSLVGFPY*PQVPGL
Trigger: TAGCCCCGGGACTTGGGGCCAATACGGAAACCCTAC...GAGGGAGAAGGGATGGAGCAGGAGCGGGCTAAGAGGGCTGCGGGGGCCTTGTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
3UTR CAA 90 bp CACTGCAGCTCATGGAGGCAGCACCGGCTTCAGGCCGCTGTGGCCTaGGTGGTCCCTTTGATGGCACGGAGGTGGATAAATGCCTGCATC +
Preference number: 2 (lower is better)
Translates to: HCSSWRQHRLQAAVA*VVPLMARRWINACI
Trigger: GATGCAGGCATTTATCCACCTCCGTGCCATCAAAGGGACCACCAAGGCCACAGCGGCCTGAAGCCGGTGCTGCCTCCATGAGCTGCAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257897.7
3UTR-3UTR GCA 90 bp ATGGCTGTGCCCAACCTGCACTGGCTGCTGACCCAACCCTACCCTGTCCAGCCCATGGAACCACCTCCATaGCCATGGGTACTGTCCTGC +
Preference number: 2 (lower is better)
Translates to: MAVPNLHWLLTQPYPVQPMEPPP*PWVLSC
Trigger: GCAGGACAGTACCCATGGGCATGGAGGTGGTTCCAT...GGGCTGGACAGGGTAGGGTTGGGTCAGCAGCCAGTGCAGGTTGGGCACAGCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257897.7
3UTR-3UTR CCA 90 bp GTGCTGTGTCCTCAGTTCAGTGGCACACTTGCAGCTGAACCTCTTGGGGCTGGTGTCTTCTGGAAGGCGTaGGGGCTGTGCCCTCGTGGG +
Preference number: 2 (lower is better)
Translates to: VLCPQFSGTLAAEPLGAGVFWKA*GLCPRG
Trigger: CCCACGAGGGCACAGCCCCCACGCCTTCCAGAAGAC...ACCAGCCCCAAGAGGTTCAGCTGCAAGTGTGCCACTGAACTGAGGACACAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257897.7
3UTR-3UTR CCA 90 bp CCCTGGCTGGGAGAGGTCACGGGGGTGAGGAATGGCTCTGGAGCTGCTCCAGTGAGAGCAATCCGAGTGTaGAAACAATGGAGAGGGGGC +
Preference number: 2 (lower is better)
Translates to: PWLGEVTGVRNGSGAAPVRAIRV*KQWRGG
Trigger: GCCCCCTCTCCATTGTTTCCACACTCGGATTGCTCT...CACTGGAGCAGCTCCAGAGCCATTCCTCACCCCCGTGACCTCTCCCAGCCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
3UTR-3UTR TCA 90 bp TGGCTATGTGCTGAGCCTAGTGGCACTGCAGCTCATGGAGGCAGCACCGGCTTCACCAAGGCCATGCCCTaGCCTGCCTCCAAGAACAGA +
Preference number: 2 (lower is better)
Translates to: WLCAEPSGTAAHGGSTGFTKAMP*PASKNR
Trigger: TCTGTTCTTGGAGGCAGGTCAGGGCATGGCCTTGGT...GAAGCCGGTGCTGCCTCCATGAGCTGCAGTGCCACTAGGCTCAGCACATAGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257897.7
3UTR-3UTR CCA 90 bp GTATGGGCTCCCGCCCTGGGATTGTTGAGCTCGGGCAGGACCGGGTCTTCTTTCGTCTCCATGCCTCGTTaGGGAGAGGGAGGTGAGTTT +
Preference number: 2 (lower is better)
Translates to: VWAPALGLLSSGRTGSSFVSMPR*GEGGEF
Trigger: AAACTCACCTCCCTCTCCCCAACGAGGCATGGAGAC...GAAAGAAGACCCGGTCCTGCCCGAGCTCAACAATCCCAGGGCGGGAGCCCATAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
3UTR-3UTR CCA 90 bp GGGAACAAAGCAATAAATTACAAGGCCCCCGCAGCCCTCTTAGCCCGCTCCTGCGGGGGCGTGTTGAGCTaGGGTCTCCATGCCTCGTTG +
Preference number: 2 (lower is better)
Translates to: GNKAINYKAPAALLARSCGGVLS*GLHASL
Trigger: CAACGAGGCATGGAGACCCCAGCTCAACACGCCCCC...GCAGGAGCGGGCTAAGAGGGCTGCGGGGGCCTTGTAATTTATTGCTTTGTTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
3UTR-3UTR CCA 90 bp GCCCTCTTAGCCCGCTCCTGCTCCATCCCTTCTCCCTCCCAAGATAGTAGTGGGGTCTCCATGCCTCGTTaGGGAGAGGGAGGTGAGTTT +
Preference number: 2 (lower is better)
Translates to: ALLARSCSIPSPSQDSSGVSMPR*GEGGEF
Trigger: AAACTCACCTCCCTCTCCCCAACGAGGCATGGAGAC...CCCACTACTATCTTGGGAGGGAGAAGGGATGGAGCAGGAGCGGGCTAAGAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
3UTR-3UTR CCA 90 bp CTGGTTTCCACTACTCACGGTCCCTTTCACGGAAAGGGTTGGGAACCCCCACCCGTAGGGTTTCCGTATTaGCCCCAAGTCCCGGGGCTA +
Preference number: 2 (lower is better)
Translates to: LVSTTHGPFHGKGWEPPPVGFPY*PQVPGL
Trigger: TAGCCCCGGGACTTGGGGCCAATACGGAAACCCTAC...GGGTGGGGGTTCCCAACCCTTTCCGTGAAAGGGACCGTGAGTAGTGGAAACCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
3UTR-3UTR CCA 90 bp CCACCTTTCCTGGGTCACGCCGCTGTGCTGGGTGGTCACAGCCTAGGACCCTGTAGCCTCCATGTGAACTaGATTCAGGTCTGGTGCTGT +
Preference number: 2 (lower is better)
Translates to: PPFLGHAAVLGGHSLGPCSLHVN*IQVWCC
Trigger: ACAGCACCAGACCTGAATCCAGTTCACATGGAGGCT...ACAGGGTCCTAGGCTGTGACCACCCAGCACAGCGGCGTGACCCAGGAAAGGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257897.7
3UTR-3UTR CCA 90 bp GCCCTCTTAGCCCGCTCCTGCTCCATCCCTTCTCCCTCCCAAGATAGTAGTGGGTTTAGCTTCCACCCATaGGTAGGTGTAGGGGACGTC +
Preference number: 2 (lower is better)
Translates to: ALLARSCSIPSPSQDSSGFSFHP*VGVGDV
Trigger: GACGTCCCCTACACCTACCCATGGGTGGAAGCTAAA...CCCACTACTATCTTGGGAGGGAGAAGGGATGGAGCAGGAGCGGGCTAAGAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
3UTR CAA 90 bp AACTGGATTCAGGTCTGGTGCTGTGTCCTCAGTTCAGTGGCACACTaGCAGCTGAACCTCTTGGGGCTGGTGGGCACCAAGGGTCAGAAG +
Preference number: 2 (lower is better)
Translates to: NWIQVWCCVLSSVAH*QLNLLGLVGTKGQK
Trigger: CTTCTGACCCTTGGTGCCCACCAGCCCCAAGAGGTTCAGCTGCAAGTGTGCCACTGAACTGAGGACACAGCACCAGACCTGAATCCAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257897.7
3UTR-3UTR CCA 90 bp CTCCAACCTGCCCACGTCCTCCACTACATGAACCCAGAACTGTTGTACATGATGACTAAACCCTCCCTCTaGCGTGGCGTCGCCCCAGGA +
Preference number: 2 (lower is better)
Translates to: LQPAHVLHYMNPELLYMMTKPSL*RGVAPG
Trigger: TCCTGGGGCGACGCCACGCCAGAGGGAGGGTTTAGT...CATCATGTACAACAGTTCTGGGTTCATGTAGTGGAGGACGTGGGCAGGTTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257897.7
3UTR CAA 90 bp TGGTGCTGTGTCCTCAGTTCAGTGGCACACTTGCAGCTGAACCTCTaGGGGCTGGTGGGCACCAAGGGTCAGAAGCAATTCTACCCAAAG +
Preference number: 2 (lower is better)
Translates to: WCCVLSSVAHLQLNL*GLVGTKGQKQFYPK
Trigger: CTTTGGGTAGAATTGCTTCTGACCCTTGGTGCCCACCAGCCCCAAGAGGTTCAGCTGCAAGTGTGCCACTGAACTGAGGACACAGCACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257897.7
3UTR CAA 90 bp GATGGCACGGAGGTGGATAAATGCCTGCATCAGCTGACACTGAGTTaGTGGACACCAGGGACCTCTGCAGCTAGCTGGGAAATCTTTCCC +
Preference number: 2 (lower is better)
Translates to: DGTEVDKCLHQLTLS*WTPGTSAASWEIFP
Trigger: GGGAAAGATTTCCCAGCTAGCTGCAGAGGTCCCTGGTGTCCACAAACTCAGTGTCAGCTGATGCAGGCATTTATCCACCTCCGTGCCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257897.7
3UTR-3UTR GCA 90 bp GTCAGAAGCAATTCTACCCAAAGATGCTGGTGCTACCAACTAACTCCTCAAGGTCCACTGACTCCAACCTaGCCACGTCCTCCACTACAT +
Preference number: 2 (lower is better)
Translates to: VRSNSTQRCWCYQLTPQGPLTPT*PRPPLH
Trigger: ATGTAGTGGAGGACGTGGGCAGGTTGGAGTCAGTGG...ACCTTGAGGAGTTAGTTGGTAGCACCAGCATCTTTGGGTAGAATTGCTTCTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257897.7
3UTR GCA 72 bp GGGTGCGTCTGTCCAGCGGTCCGCCCGGTGTGGTCGTaGCCGGCCCGCGTGGGGATGGGGGTGTCTCTCCCG +
Preference number: 3 (lower is better)
Translates to: GCVCPAVRPVWS*PARVGMGVSLP
Trigger: CGGGAGAGACACCCCCATCCCCACGCGGGCCGGGCACGACCACACCGGGCGGACCGCTGGACAGACGCACCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
3UTR CCA 72 bp GTGAGTGGGTGCGTCTGTCCAGCGGTCCGCCCGGTGTaGTCGTGCCCGGCCCGCGTGGGGATGGGGGTGTCT +
Preference number: 3 (lower is better)
Translates to: VSGCVCPAVRPV*SCPARVGMGVS
Trigger: AGACACCCCCATCCCCACGCGGGCCGGGCACGACCACACCGGGCGGACCGCTGGACAGACGCACCCACTCAC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
3UTR CCA 72 bp TCTGGCGTGGCGTCGCCCCAGGAGCCAGCCTGGGTATaGGCTCCCGCCCTGGGATTGTTGAGCTCGGGCAGG +
Preference number: 3 (lower is better)
Translates to: SGVASPQEPAWV*APALGLLSSGR
Trigger: CCTGCCCGAGCTCAACAATCCCAGGGCGGGAGCCCATACCCAGGCTGGCTCCTGGGGCGACGCCACGCCAGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
3UTR CCA 72 bp CCTCCCTCTGGCGTGGCGTCGCCCCAGGAGCCAGCCTaGGTATGGGCTCCCGCCCTGGGATTGTTGAGCTCG +
Preference number: 3 (lower is better)
Translates to: PPSGVASPQEPA*VWAPALGLLSS
Trigger: CGAGCTCAACAATCCCAGGGCGGGAGCCCATACCCAGGCTGGCTCCTGGGGCGACGCCACGCCAGAGGGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
3UTR CCA 72 bp CCGGGGCTAGCCCTCCCATGTACTAAACCCTCCCTCTaGCGTGGCGTCGCCCCAGGAGCCAGCCTGGGTATG +
Preference number: 3 (lower is better)
Translates to: PGLALPCTKPSL*RGVAPGASLGM
Trigger: CATACCCAGGCTGGCTCCTGGGGCGACGCCACGCCAGAGGGAGGGTTTAGTACATGGGAGGGCTAGCCCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
3UTR CCA 72 bp TCAGCCCTGGCTGGGAGAGGTCACGGGGGTGAGGAATaGCTCTGGAGCTGCTCCAGTGGGAGGGAGGGGCTG +
Preference number: 3 (lower is better)
Translates to: SALAGRGHGGEE*LWSCSSGREGL
Trigger: CAGCCCCTCCCTCCCACTGGAGCAGCTCCAGAGCCATTCCTCACCCCCGTGACCTCTCCCAGCCAGGGCTGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
3UTR TCA 72 bp AGCCAGCCTGGGTATGGGCTCCCGCCCTGGGATTGTTaGGCTCGGGCAGGACCGGGTCTTCTTTCCGCCCCT +
Preference number: 3 (lower is better)
Translates to: SQPGYGLPPWDC*ARAGPGLLSAP
Trigger: AGGGGCGGAAAGAAGACCCGGTCCTGCCCGAGCTCAACAATCCCAGGGCGGGAGCCCATACCCAGGCTGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
3UTR-3UTR CAA 90 bp GCCCTCTTAGCCCGCTCCTGCTCCATCCCTTCTCCCTCCCAAGATAGTAGTGGGCCCGCCCTGGGATTGTaGAGCTCGGGCAGGACCGGG +
Preference number: 3 (lower is better)
Translates to: ALLARSCSIPSPSQDSSGPALGL*SSGRTG
Trigger: CCCGGTCCTGCCCGAGCTCAACAATCCCAGGGCGGG...CCCACTACTATCTTGGGAGGGAGAAGGGATGGAGCAGGAGCGGGCTAAGAGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
3UTR-3UTR CAA 90 bp CCCTGGCTGGGAGAGGTCACGGGGGTGAGGAATGGCTCTGGAGCTGCTCCAGTGGGTAGGGTTTCCGTATaGGCCCCAAGTCCCGGGGCT +
Preference number: 3 (lower is better)
Translates to: PWLGEVTGVRNGSGAAPVGRVSV*APSPGA
Trigger: AGCCCCGGGACTTGGGGCCAATACGGAAACCCTACC...CACTGGAGCAGCTCCAGAGCCATTCCTCACCCCCGTGACCTCTCCCAGCCAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
3UTR-3UTR CAA 90 bp TGTGCTGAGCCTAGTGGCACTGCAGCTCATGGAGGCAGCACCGGCTTCAGGCCGGCCCTATCACCCAGTTaGTGGGGAAGGGGCAGGGGG +
Preference number: 3 (lower is better)
Translates to: CAEPSGTAAHGGSTGFRPALSPS*WGRGRG
Trigger: CCCCCTGCCCCTTCCCCACAAACTGGGTGATAGGGC...CGGCCTGAAGCCGGTGCTGCCTCCATGAGCTGCAGTGCCACTAGGCTCAGCACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257897.7
3UTR-3UTR CAA 90 bp TCTGCCTGTCCCTGTCCAACCCCAGTACCCCATCTTGACCAAGGCCATGCCCTGGCTCCCGCCCTGGGATaGTTGAGCTCGGGCAGGACC +
Preference number: 3 (lower is better)
Translates to: SACPCPTPVPHLDQGHALAPALG*LSSGRT
Trigger: GGTCCTGCCCGAGCTCAACAATCCCAGGGCGGGAGC...CAGGGCATGGCCTTGGTCAAGATGGGGTACTGGGGTTGGACAGGGACAGGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257897.7
3UTR TCA 72 bp AATCCTCTCAGCCCTGGCTGGGAGAGGTCACGGGGGTaGGGAATGGCTCTGGAGCTGCTCCAGTGGGAGGGA +
Preference number: 3 (lower is better)
Translates to: NPLSPGWERSRG*GMALELLQWEG
Trigger: TCCCTCCCACTGGAGCAGCTCCAGAGCCATTCCTCACCCCCGTGACCTCTCCCAGCCAGGGCTGAGAGGATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
3UTR CCA 72 bp GGAAACCCTCCCAGCCACCTCGAATCCTCTCAGCCCTaGCTGGGAGAGGTCACGGGGGTGAGGAATGGCTCT +
Preference number: 3 (lower is better)
Translates to: GNPPSHLESSQP*LGEVTGVRNGS
Trigger: AGAGCCATTCCTCACCCCCGTGACCTCTCCCAGCCAGGGCTGAGAGGATTCGAGGTGGCTGGGAGGGTTTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
3UTR CCA 72 bp GTGAGCAGGCTGGCTCGGGGCAGCCCTCCTCAGAGCTaGAGCGCCTTTCAGGTGCCCTCTGAACAGATACTG +
Preference number: 3 (lower is better)
Translates to: VSRLARGSPPQS*SAFQVPSEQIL
Trigger: CAGTATCTGTTCAGAGGGCACCTGAAAGGCGCTCCAGCTCTGAGGAGGGCTGCCCCGAGCCAGCCTGCTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257897.7
3UTR TCA 72 bp CAACCCCAGTACCCCATCTTGACCAAGGCCATGCCCTaGCCTGCCTCCAAGAACAGACCAGCAGCTCACCCC +
Preference number: 3 (lower is better)
Translates to: QPQYPILTKAMP*PASKNRPAAHP
Trigger: GGGGTGAGCTGCTGGTCTGTTCTTGGAGGCAGGTCAGGGCATGGCCTTGGTCAAGATGGGGTACTGGGGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257897.7
3UTR CCA 72 bp GCGGGTAGACCCAGAGCAATCCGAGTGTGGAAACAATaGAGAGGGGGCGTGTTGAGCTGGGGTCTCCATGCC +
Preference number: 3 (lower is better)
Translates to: AGRPRAIRVWKQ*RGGVLSWGLHA
Trigger: GGCATGGAGACCCCAGCTCAACACGCCCCCTCTCCATTGTTTCCACACTCGGATTGCTCTGGGTCTACCCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
3UTR TCA 72 bp GGTGCTGTGTCCTCAGTTCAGTGGCACACTTGCAGCTaGACCTCTTGGGGCTGGTGGGCACCAAGGGTCAGA +
Preference number: 3 (lower is better)
Translates to: GAVSSVQWHTCS*TSWGWWAPRVR
Trigger: TCTGACCCTTGGTGCCCACCAGCCCCAAGAGGTTCAGCTGCAAGTGTGCCACTGAACTGAGGACACAGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257897.7
3UTR GCA 72 bp AATTACAAGGCCCCCGCAGCCCTCTTAGCCCGCTCCTaGTCCATCCCTTCTCCCTCCCAAGATAGTAGTGGG +
Preference number: 3 (lower is better)
Translates to: NYKAPAALLARS*SIPSPSQDSSG
Trigger: CCCACTACTATCTTGGGAGGGAGAAGGGATGGAGCAGGAGCGGGCTAAGAGGGCTGCGGGGGCCTTGTAATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
3UTR GCA 72 bp CCAGTACCCCATCTTGACCAAGGCCATGCCCTGACCTaGCTCCAAGAACAGACCAGCAGCTCACCCCCTAGA +
Preference number: 3 (lower is better)
Translates to: PVPHLDQGHALT*LQEQTSSSPPR
Trigger: TCTAGGGGGTGAGCTGCTGGTCTGTTCTTGGAGGCAGGTCAGGGCATGGCCTTGGTCAAGATGGGGTACTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257897.7
3UTR CCA 72 bp AGGCCAGGGGAGGAACCCCTACTCTATGTTCTACTCTaGTACCTAGTGCTCACGGTGAGCAGGCTGGCTCGG +
Preference number: 3 (lower is better)
Translates to: RPGEEPLLYVLL*YLVLTVSRLAR
Trigger: CCGAGCCAGCCTGCTCACCGTGAGCACTAGGTACCAGAGTAGAACATAGAGTAGGGGTTCCTCCCCTGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257897.7
3UTR TCA 72 bp CACAGCCTAGGACCCTGTAGAGCCGCAGCCTCCATGTaGACTGGATTCAGGTCTGGTGCTGTGTCCTCAGTT +
Preference number: 3 (lower is better)
Translates to: HSLGPCRAAASM*TGFRSGAVSSV
Trigger: AACTGAGGACACAGCACCAGACCTGAATCCAGTTCACATGGAGGCTGCGGCTCTACAGGGTCCTAGGCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257897.7
3UTR GCA 72 bp AACCCAGAACTGTTGTACATGATGGAACCACCTCCATaGCCATGGGTACTGTCCTGCCACCAGCCCCAGTGG +
Preference number: 3 (lower is better)
Translates to: NPELLYMMEPPP*PWVLSCHQPQW
Trigger: CCACTGGGGCTGGTGGCAGGACAGTACCCATGGGCATGGAGGTGGTTCCATCATGTACAACAGTTCTGGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257897.7
3UTR GCA 72 bp CTTGGTGGTCCCTTTGATGGCACGGAGGTGGATAAATaGCTGCATCAGCTGACACTGAGTTTGTGGACACCA +
Preference number: 3 (lower is better)
Translates to: LGGPFDGTEVDK*LHQLTLSLWTP
Trigger: TGGTGTCCACAAACTCAGTGTCAGCTGATGCAGGCATTTATCCACCTCCGTGCCATCAAAGGGACCACCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257897.7
3UTR TCA 72 bp CCCTCCTCAGAGCTGGAGCGCCTTTCAGGTGCCCTCTaGACAGATACTGTTCAGAATACAGATAAACAGATG +
Preference number: 3 (lower is better)
Translates to: PSSELERLSGAL*TDTVQNTDKQM
Trigger: CATCTGTTTATCTGTATTCTGAACAGTATCTGTTCAGAGGGCACCTGAAAGGCGCTCCAGCTCTGAGGAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257897.7
3UTR TCA 72 bp ATTTCCTTCCCATATTCTCTCACACTCCCAAACTTCTaGAGAAGGGAGCAAACTTTGGCCACGAGGAAGGAG +
Preference number: 3 (lower is better)
Translates to: ISFPYSLTLPNF*RREQTLATRKE
Trigger: CTCCTTCCTCGTGGCCAAAGTTTGCTCCCTTCTTCAGAAGTTTGGGAGTGTGAGAGAATATGGGAAGGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR CCA 90 bp CCAGCGGTCCGCCCGGTGTGGTCGTGCCCGGCCCGCGTGGGGATGGGGGTGTCTCGGCCCGCGTGGGGATaGGGGTGTCTCTCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: PAVRPVWSCPARVGMGVSRPAWG*GCLSRW
Trigger: CCAGCGGGAGAGACACCCCCATCCCCACGCGGGCCG...AGACACCCCCATCCCCACGCGGGCCGGGCACGACCACACCGGGCGGACCGCTGG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CCA 90 bp CCAGCGGTCCGCCCGGTGTGGTCGTGCCCGGCCCGCGTGGGGATGGGGGTGTCTATGTCGGCGCACAGCTaGCTTCCAGCCTGGCGGGCG +
Preference number: 4 (lower is better)
Translates to: PAVRPVWSCPARVGMGVSMSAHS*LPAWRA
Trigger: CGCCCGCCAGGCTGGAAGCCAGCTGTGCGCCGACAT...AGACACCCCCATCCCCACGCGGGCCGGGCACGACCACACCGGGCGGACCGCTGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CCA 90 bp CAGCGGTCCGCCCGGTGTGGTCGTGCCCGGCCCGCGTGGGGATGGGGGTGTCTCCCCGGGCAGCCGTGCTaGAGAAGGATGTCGGCGCAC +
Preference number: 4 (lower is better)
Translates to: QRSARCGRARPAWGWGCLPGQPC*RRMSAH
Trigger: GTGCGCCGACATCCTTCTCCAGCACGGCTGCCCGGG...GAGACACCCCCATCCCCACGCGGGCCGGGCACGACCACACCGGGCGGACCGCTG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR TCA 90 bp CCAGCGGTCCGCCCGGTGTGGTCGTGCCCGGCCCGCGTGGGGATGGGGGTGTCTCCCGGCGCTGCTCTTTaGCCCCTTGACCCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: PAVRPVWSCPARVGMGVSPGAAL*PLDPGL
Trigger: AAGCCCAGGGTCAAGGGGTCAAAGAGCAGCGCCGGG...AGACACCCCCATCCCCACGCGGGCCGGGCACGACCACACCGGGCGGACCGCTGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328568.9
CDS-3UTR GCA 90 bp CAGCGGTCCGCCCGGTGTGGTCGTGCCCGGCCCGCGTGGGGATGGGGGTGTCTCTCACCCGGGCAGCCGTaGTGGAGAAGGATGTCGGCG +
Preference number: 4 (lower is better)
Translates to: QRSARCGRARPAWGWGCLSPGQP*WRRMSA
Trigger: CGCCGACATCCTTCTCCAGCACGGCTGCCCGGGTGA...GAGACACCCCCATCCCCACGCGGGCCGGGCACGACCACACCGGGCGGACCGCTG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CCA 90 bp CAGCGGTCCGCCCGGTGTGGTCGTGCCCGGCCCGCGTGGGGATGGGGGTGTCTCCCGGTGCAGGGACCCTaGGGTGCTCAATCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: QRSARCGRARPAWGWGCLPVQGP*GAQSSH
Trigger: GTGGCTGGATTGAGCACCCCAGGGTCCCTGCACCGG...GAGACACCCCCATCCCCACGCGGGCCGGGCACGACCACACCGGGCGGACCGCTG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CCA 90 bp CGTCTGTCCAGCGGTCCGCCCGGTGTGGTCGTGCCCGGCCCGCGTGGGGATGGGGTGGGTCCTCTACGCTaGTGTCGAGCGGCCCGTGTC +
Preference number: 4 (lower is better)
Translates to: RLSSGPPGVVVPGPRGDGVGPLR*CRAARV
Trigger: GACACGGGCCGCTCGACACCAGCGTAGAGGACCCAC...CCCATCCCCACGCGGGCCGGGCACGACCACACCGGGCGGACCGCTGGACAGACG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CCA 90 bp CCAGCGGTCCGCCCGGTGTGGTCGTGCCCGGCCCGCGTGGGGATGGGGGTGTCTGTGGGTCCTCTACGCTaGTGTCGAGCGGCCCGTGTC +
Preference number: 4 (lower is better)
Translates to: PAVRPVWSCPARVGMGVSVGPLR*CRAARV
Trigger: GACACGGGCCGCTCGACACCAGCGTAGAGGACCCAC...AGACACCCCCATCCCCACGCGGGCCGGGCACGACCACACCGGGCGGACCGCTGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CCA 90 bp CCAGCGGTCCGCCCGGTGTGGTCGTGCCCGGCCCGCGTGGGGATGGGGGTGTCTGAGCCAGCCTGGGTATaGGCTCCCGCCCTGGGATTG +
Preference number: 4 (lower is better)
Translates to: PAVRPVWSCPARVGMGVSEPAWV*APALGL
Trigger: CAATCCCAGGGCGGGAGCCCATACCCAGGCTGGCTC...AGACACCCCCATCCCCACGCGGGCCGGGCACGACCACACCGGGCGGACCGCTGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CCA 90 bp CGTCTGTCCAGCGGTCCGCCCGGTGTGGTCGTGCCCGGCCCGCGTGGGGATGGGCGCCCAGCAGCTCCCTaGACCCGCTGCCAGAAGACA +
Preference number: 4 (lower is better)
Translates to: RLSSGPPGVVVPGPRGDGRPAAP*TRCQKT
Trigger: TGTCTTCTGGCAGCGGGTCCAGGGAGCTGCTGGGCG...CCCATCCCCACGCGGGCCGGGCACGACCACACCGGGCGGACCGCTGGACAGACG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328568.9
CDS-3UTR TCA 90 bp CAGCGGTCCGCCCGGTGTGGTCGTGCCCGGCCCGCGTGGGGATGGGGGTGTCTCGCTCGGAGCTCCCGGTaGCCAACATTCGGTGAGGAC +
Preference number: 4 (lower is better)
Translates to: QRSARCGRARPAWGWGCLARSSR*PTFGED
Trigger: GTCCTCACCGAATGTTGGTCACCGGGAGCTCCGAGC...GAGACACCCCCATCCCCACGCGGGCCGGGCACGACCACACCGGGCGGACCGCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR TCA 90 bp GTCTGTCCAGCGGTCCGCCCGGTGTGGTCGTGCCCGGCCCGCGTGGGGATGGGGGCTCGGAGCTCCCGGTaGCCAACATTCGGTGAGGAC +
Preference number: 4 (lower is better)
Translates to: VCPAVRPVWSCPARVGMGARSSR*PTFGED
Trigger: GTCCTCACCGAATGTTGGTCACCGGGAGCTCCGAGC...CCCCATCCCCACGCGGGCCGGGCACGACCACACCGGGCGGACCGCTGGACAGAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR TCA 90 bp CCAGCGGTCCGCCCGGTGTGGTCGTGCCCGGCCCGCGTGGGGATGGGGGTGTCTTGCTCTTTGACCCCTTaGCCCTGGGCTTGCCCTCGC +
Preference number: 4 (lower is better)
Translates to: PAVRPVWSCPARVGMGVSCSLTP*PWACPR
Trigger: GCGAGGGCAAGCCCAGGGTCAAGGGGTCAAAGAGCA...AGACACCCCCATCCCCACGCGGGCCGGGCACGACCACACCGGGCGGACCGCTGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328568.9
CDS-3UTR GCA 90 bp CGTCTGTCCAGCGGTCCGCCCGGTGTGGTCGTGCCCGGCCCGCGTGGGGATGGGTTGTGTCCCCACCAGTaGCAAGGCCAGGCCTCCTCG +
Preference number: 4 (lower is better)
Translates to: RLSSGPPGVVVPGPRGDGLCPHQ*QGQASS
Trigger: CGAGGAGGCCTGGCCTTGGCACTGGTGGGGACACAA...CCCATCCCCACGCGGGCCGGGCACGACCACACCGGGCGGACCGCTGGACAGACG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CCA 90 bp GTCTGTCCAGCGGTCCGCCCGGTGTGGTCGTGCCCGGCCCGCGTGGGGATGGGGCCGCGCACAGAGCTCTaGCACGAGCATCTCCCACCA +
Preference number: 4 (lower is better)
Translates to: VCPAVRPVWSCPARVGMGPRTEL*HEHLPP
Trigger: TGGTGGGAGATGCTCGTGCCAGAGCTCTGTGCGCGG...CCCCATCCCCACGCGGGCCGGGCACGACCACACCGGGCGGACCGCTGGACAGAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CCA 90 bp CCAGCGGTCCGCCCGGTGTGGTCGTGCCCGGCCCGCGTGGGGATGGGGGTGTCTGCCACGGCCTCGCTTTaGCTGTCTGTGCGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: PAVRPVWSCPARVGMGVSATASL*LSVRSL
Trigger: CAAGCTGCGCACAGACAGCCAAAGCGAGGCCGTGGC...AGACACCCCCATCCCCACGCGGGCCGGGCACGACCACACCGGGCGGACCGCTGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CCA 90 bp CAGCGGTCCGCCCGGTGTGGTCGTGCCCGGCCCGCGTGGGGATGGGGGTGTCTCGCCACGGCCTCGCTTTaGCTGTCTGTGCGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: QRSARCGRARPAWGWGCLATASL*LSVRSL
Trigger: CAAGCTGCGCACAGACAGCCAAAGCGAGGCCGTGGC...GAGACACCCCCATCCCCACGCGGGCCGGGCACGACCACACCGGGCGGACCGCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR GCA 90 bp GTCTGTCCAGCGGTCCGCCCGGTGTGGTCGTGCCCGGCCCGCGTGGGGATGGGGCAAAAAGGCTGGTCCTaGGCTTGGCTGCCCGGTGCA +
Preference number: 4 (lower is better)
Translates to: VCPAVRPVWSCPARVGMGQKGWS*AWLPGA
Trigger: TGCACCGGGCAGCCAAGCGCAGGACCAGCCTTTTTG...CCCCATCCCCACGCGGGCCGGGCACGACCACACCGGGCGGACCGCTGGACAGAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR GCA 90 bp CAGCGGTCCGCCCGGTGTGGTCGTGCCCGGCCCGCGTGGGGATGGGGGTGTCTCCTCTTAGCCCGCTCCTaGTCCATCCCTTCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: QRSARCGRARPAWGWGCLLLARS*SIPSPS
Trigger: GGAGGGAGAAGGGATGGAGCAGGAGCGGGCTAAGAG...GAGACACCCCCATCCCCACGCGGGCCGGGCACGACCACACCGGGCGGACCGCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CCA 90 bp CCAGCGGTCCGCCCGGTGTGGTCGTGCCCGGCCCGCGTGGGGATGGGGGTGTCTCCCCCGTTACTAGCCTaGCCAGCTACCGGAGTGGAT +
Preference number: 4 (lower is better)
Translates to: PAVRPVWSCPARVGMGVSPPLLA*PATGVD
Trigger: ATCCACTCCGGTAGCTGGCCAGGCTAGTAACGGGGG...AGACACCCCCATCCCCACGCGGGCCGGGCACGACCACACCGGGCGGACCGCTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CCA 90 bp GCTCGGGCAGGACCGGGTCTTCTTTCCGCCCCTAGGGGGCACAAGCGGGCATGTCGTGCCCGGCCCGCGTaGGGATGGGGGTGTCTCTCC +
Preference number: 4 (lower is better)
Translates to: ARAGPGLLSAPRGHKRACRARPA*GWGCLS
Trigger: GGAGAGACACCCCCATCCCCACGCGGGCCGGGCACG...ACATGCCCGCTTGTGCCCCCTAGGGGCGGAAAGAAGACCCGGTCCTGCCCGAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CCA 90 bp CCAGCGGTCCGCCCGGTGTGGTCGTGCCCGGCCCGCGTGGGGATGGGGGTGTCTGATCGGAGAGGTGAGTaGGTGCGTCTGTCCAGCGGT +
Preference number: 4 (lower is better)
Translates to: PAVRPVWSCPARVGMGVSDRRGE*VRLSSG
Trigger: ACCGCTGGACAGACGCACCCACTCACCTCTCCGATC...AGACACCCCCATCCCCACGCGGGCCGGGCACGACCACACCGGGCGGACCGCTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CCA 90 bp CAGCGGTCCGCCCGGTGTGGTCGTGCCCGGCCCGCGTGGGGATGGGGGTGTCTCGGTGAGGAATGGCTCTaGAGCTGCTCCAGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: QRSARCGRARPAWGWGCLGEEWL*SCSSGR
Trigger: CCTCCCACTGGAGCAGCTCCAGAGCCATTCCTCACC...GAGACACCCCCATCCCCACGCGGGCCGGGCACGACCACACCGGGCGGACCGCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR TCA 90 bp CGTCTGTCCAGCGGTCCGCCCGGTGTGGTCGTGCCCGGCCCGCGTGGGGATGGGTCGGTGGATGAGCGATaGCTTCCCACTCCTGGCATC +
Preference number: 4 (lower is better)
Translates to: RLSSGPPGVVVPGPRGDGSVDER*LPTPGI
Trigger: GATGCCAGGAGTGGGAAGTCATCGCTCATCCACCGA...CCCATCCCCACGCGGGCCGGGCACGACCACACCGGGCGGACCGCTGGACAGACG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR TCA 90 bp CAGCGGTCCGCCCGGTGTGGTCGTGCCCGGCCCGCGTGGGGATGGGGGTGTCTCCTCCAGCACCTGGTATaGGCCAGTCAGGAATCGGTG +
Preference number: 4 (lower is better)
Translates to: QRSARCGRARPAWGWGCLLQHLV*ASQESV
Trigger: CACCGATTCCTGACTGGCTCATACCAGGTGCTGGAG...GAGACACCCCCATCCCCACGCGGGCCGGGCACGACCACACCGGGCGGACCGCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR TCA 90 bp CCAGCGGTCCGCCCGGTGTGGTCGTGCCCGGCCCGCGTGGGGATGGGGGTGTCTAGCATCTGCCCAGCCTaGGAACTTGGCATCAGGTGC +
Preference number: 4 (lower is better)
Translates to: PAVRPVWSCPARVGMGVSSICPA*ELGIRC
Trigger: GCACCTGATGCCAAGTTCTCAGGCTGGGCAGATGCT...AGACACCCCCATCCCCACGCGGGCCGGGCACGACCACACCGGGCGGACCGCTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR TCA 90 bp CAGCGGTCCGCCCGGTGTGGTCGTGCCCGGCCCGCGTGGGGATGGGGGTGTCTCGTAGGAAGCTCTGTTTaGTGGGGATGGCTCGCCCAC +
Preference number: 4 (lower is better)
Translates to: QRSARCGRARPAWGWGCLVGSSV*WGWLAH
Trigger: GTGGGCGAGCCATCCCCATCAAACAGAGCTTCCTAC...GAGACACCCCCATCCCCACGCGGGCCGGGCACGACCACACCGGGCGGACCGCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR TCA 90 bp CGTCTGTCCAGCGGTCCGCCCGGTGTGGTCGTGCCCGGCCCGCGTGGGGATGGGGCAGTCCACGCAGATTaGATTCCCCTTGGCGTTCCG +
Preference number: 4 (lower is better)
Translates to: RLSSGPPGVVVPGPRGDGAVHAD*IPLGVP
Trigger: CGGAACGCCAAGGGGAATTCAATCTGCGTGGACTGC...CCCATCCCCACGCGGGCCGGGCACGACCACACCGGGCGGACCGCTGGACAGACG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR TCA 90 bp TTACAAGGCCCCCGCAGCCCTCTTAGCCCGCTCCTGCTCCATCCCTTCTCCCTCGGCTGGGCGTGGCGGTaGTGCTGGGCGTGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: LQGPRSPLSPLLLHPFSLGWAWR*CWAWWP
Trigger: CGGCCACCACGCCCAGCATCACCGCCACGCCCAGCC...GAGGGAGAAGGGATGGAGCAGGAGCGGGCTAAGAGGGCTGCGGGGGCCTTGTAA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR TCA 90 bp CAGCGGTCCGCCCGGTGTGGTCGTGCCCGGCCCGCGTGGGGATGGGGGTGTCTCAAGACCGGAAACCACTaGCACAGACAGCCCAAGGGC +
Preference number: 4 (lower is better)
Translates to: QRSARCGRARPAWGWGCLKTGNH*HRQPKG
Trigger: GCCCTTGGGCTGTCTGTGTCAGTGGTTTCCGGTCTT...GAGACACCCCCATCCCCACGCGGGCCGGGCACGACCACACCGGGCGGACCGCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR GCA 90 bp GTCTGTCCAGCGGTCCGCCCGGTGTGGTCGTGCCCGGCCCGCGTGGGGATGGGGCGAAGGGAACTCAGCTaGCCATGGAGACGGCTCACA +
Preference number: 4 (lower is better)
Translates to: VCPAVRPVWSCPARVGMGRRELS*PWRRLT
Trigger: TGTGAGCCGTCTCCATGGGCAGCTGAGTTCCCTTCG...CCCCATCCCCACGCGGGCCGGGCACGACCACACCGGGCGGACCGCTGGACAGAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR GCA 90 bp CGTCTGTCCAGCGGTCCGCCCGGTGTGGTCGTGCCCGGCCCGCGTGGGGATGGGAGCTGGGCAGGGACTTaGAGGCAGCCAGAAGCTGTT +
Preference number: 4 (lower is better)
Translates to: RLSSGPPGVVVPGPRGDGSWAGT*RQPEAV
Trigger: AACAGCTTCTGGCTGCCTGCAAGTCCCTGCCCAGCT...CCCATCCCCACGCGGGCCGGGCACGACCACACCGGGCGGACCGCTGGACAGACG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR GCA 90 bp GCTCGGGCAGGACCGGGTCTTCTTTCCGCCCCTAGGGGGCACAAGCGGGCATGTCGCTTGGCTGCCCGGTaGAGGGACCCTGGGGTGCTC +
Preference number: 4 (lower is better)
Translates to: ARAGPGLLSAPRGHKRACRLAAR*RDPGVL
Trigger: GAGCACCCCAGGGTCCCTGCACCGGGCAGCCAAGCG...ACATGCCCGCTTGTGCCCCCTAGGGGCGGAAAGAAGACCCGGTCCTGCCCGAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR GCA 90 bp GTCTGTCCAGCGGTCCGCCCGGTGTGGTCGTGCCCGGCCCGCGTGGGGATGGGGGCCACGTCTGACCCGTaGTGGACACGATCAGGAACT +
Preference number: 4 (lower is better)
Translates to: VCPAVRPVWSCPARVGMGATSDP*WTRSGT
Trigger: AGTTCCTGATCGTGTCCAGCACGGGTCAGACGTGGC...CCCCATCCCCACGCGGGCCGGGCACGACCACACCGGGCGGACCGCTGGACAGAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR GCA 90 bp CAGCGGTCCGCCCGGTGTGGTCGTGCCCGGCCCGCGTGGGGATGGGGGTGTCTCGGTGTGTGCCCAGGTTaGGGTGGATGCCAGAACACT +
Preference number: 4 (lower is better)
Translates to: QRSARCGRARPAWGWGCLGVCPG*GGCQNT
Trigger: AGTGTTCTGGCATCCACCGCAACCTGGGCACACACC...GAGACACCCCCATCCCCACGCGGGCCGGGCACGACCACACCGGGCGGACCGCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR GCA 90 bp GGGCATGTCCAAGCGCCTAGGAGCCCGTACCGCTGGGGACCTCCCCTTCCGCGAGCGGCTCCTCCGAGGTaGTCAGCGGCGCCAGGAACA +
Preference number: 4 (lower is better)
Translates to: GHVQAPRSPYRWGPPLPRAAPPR*SAAPGT
Trigger: TGTTCCTGGCGCCGCTGAGCACCTCGGAGGAGCCGC...TCGCGGAAGGGGAGGTCCCCAGCGGTACGGGCTCCTAGGCGCTTGGACATGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR GCA 90 bp GTACTAAACCCTCCCTCTGGCGTGGCGTCGCCCCAGGAGCCAGCCTGGGTATGGGCCACGTCCTGGGCCTaGACGGCGGCCCACAGCTGG +
Preference number: 4 (lower is better)
Translates to: VLNPPSGVASPQEPAWVWATSWA*TAAHSW
Trigger: CCAGCTGTGGGCCGCCGTGCAGGCCCAGGACGTGGC...CCATACCCAGGCTGGCTCCTGGGGCGACGCCACGCCAGAGGGAGGGTTTAGTAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR GCA 90 bp CGTCTGTCCAGCGGTCCGCCCGGTGTGGTCGTGCCCGGCCCGCGTGGGGATGGGTACCACAGCAGCAGTTaGGTGATGACGACGTGGGCG +
Preference number: 4 (lower is better)
Translates to: RLSSGPPGVVVPGPRGDGYHSSS*VMTTWA
Trigger: CGCCCACGTCGTCATCACGCAACTGCTGCTGTGGTA...CCCATCCCCACGCGGGCCGGGCACGACCACACCGGGCGGACCGCTGGACAGACG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR GCA 90 bp GCTCCCGCCCTGGGATTGTTGAGCTCGGGCAGGACCGGGTCTTCTTTCCGCCCCCGTAGAACAGCGCCGTaGGGCCCTGGGCGTCACGGG +
Preference number: 4 (lower is better)
Translates to: APALGLLSSGRTGSSFRPRRTAP*GPGRHG
Trigger: CCCGTGACGCCCAGGGCCGCACGGCGCTGTTCTACG...GGGGCGGAAAGAAGACCCGGTCCTGCCCGAGCTCAACAATCCCAGGGCGGGAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR GCA 90 bp GTCTGTCCAGCGGTCCGCCCGGTGTGGTCGTGCCCGGCCCGCGTGGGGATGGGGGCAGGCGGTCCCGGATaGAAGTCACTGTTGTCCAAG +
Preference number: 4 (lower is better)
Translates to: VCPAVRPVWSCPARVGMGAGGPG*KSLLSK
Trigger: CTTGGACAACAGTGACTTGCATCCGGGACCGCCTGC...CCCCATCCCCACGCGGGCCGGGCACGACCACACCGGGCGGACCGCTGGACAGAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328568.9
CDS-3UTR CCA 90 bp CCAGCGGTCCGCCCGGTGTGGTCGTGCCCGGCCCGCGTGGGGATGGGGGTGTCTATGACTTCCCACTCCTaGCATCGCCCAGCACACCCA +
Preference number: 4 (lower is better)
Translates to: PAVRPVWSCPARVGMGVSMTSHS*HRPAHP
Trigger: TGGGTGTGCTGGGCGATGCCAGGAGTGGGAAGTCAT...AGACACCCCCATCCCCACGCGGGCCGGGCACGACCACACCGGGCGGACCGCTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CCA 90 bp GTCTGTCCAGCGGTCCGCCCGGTGTGGTCGTGCCCGGCCCGCGTGGGGATGGGGAAGGTCACCACCTTCTaGGCCACCTCCTGGAAGACC +
Preference number: 4 (lower is better)
Translates to: VCPAVRPVWSCPARVGMGKVTTF*ATSWKT
Trigger: GGTCTTCCAGGAGGTGGCCCAGAAGGTGGTGACCTT...CCCCATCCCCACGCGGGCCGGGCACGACCACACCGGGCGGACCGCTGGACAGAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CCA 90 bp CAGCGGTCCGCCCGGTGTGGTCGTGCCCGGCCCGCGTGGGGATGGGGGTGTCTCGCTCAGGTCTCCAGATaGGGTACAGTCCGTGCTGAG +
Preference number: 4 (lower is better)
Translates to: QRSARCGRARPAWGWGCLAQVSR*GTVRAE
Trigger: CTCAGCACGGACTGTACCCCATCTGGAGACCTGAGC...GAGACACCCCCATCCCCACGCGGGCCGGGCACGACCACACCGGGCGGACCGCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CCA 90 bp GCTCCCGCCCTGGGATTGTTGAGCTCGGGCAGGACCGGGTCTTCTTTCCGCCCCAGTCCCGCGAGGGCTTaGCACGGCCTCGCGTGTCGC +
Preference number: 4 (lower is better)
Translates to: APALGLLSSGRTGSSFRPSPARA*HGLACR
Trigger: GCGACACGCGAGGCCGTGCCAAGCCCTCGCGGGACT...GGGGCGGAAAGAAGACCCGGTCCTGCCCGAGCTCAACAATCCCAGGGCGGGAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CCA 90 bp GTCTGTCCAGCGGTCCGCCCGGTGTGGTCGTGCCCGGCCCGCGTGGGGATGGGGGGGTGTCTCTCCCGCTaGGCAACTATACCAGCGCAA +
Preference number: 4 (lower is better)
Translates to: VCPAVRPVWSCPARVGMGGCLSR*ATIPAQ
Trigger: TTGCGCTGGTATAGTTGCCCAGCGGGAGAGACACCC...CCCCATCCCCACGCGGGCCGGGCACGACCACACCGGGCGGACCGCTGGACAGAC
70% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR TCA 90 bp CGTCTGTCCAGCGGTCCGCCCGGTGTGGTCGTGCCCGGCCCGCGTGGGGATGGGCCACCTCATGTCGTCTaGCTTCTGCTCTCACTGCAG +
Preference number: 4 (lower is better)
Translates to: RLSSGPPGVVVPGPRGDGPPHVV*LLLSLQ
Trigger: CTGCAGTGAGAGCAGAAGTCAGACGACATGAGGTGG...CCCATCCCCACGCGGGCCGGGCACGACCACACCGGGCGGACCGCTGGACAGACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR TCA 90 bp GTCTGTCCAGCGGTCCGCCCGGTGTGGTCGTGCCCGGCCCGCGTGGGGATGGGGGCTTGCCCGGGACTTTaGCTGTTGTTCGCAGCAAGT +
Preference number: 4 (lower is better)
Translates to: VCPAVRPVWSCPARVGMGACPGL*LLFAAS
Trigger: ACTTGCTGCGAACAACAGTCAAAGTCCCGGGCAAGC...CCCCATCCCCACGCGGGCCGGGCACGACCACACCGGGCGGACCGCTGGACAGAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR GCA 90 bp CCAGCGGTCCGCCCGGTGTGGTCGTGCCCGGCCCGCGTGGGGATGGGGGTGTCTAGGCGGTTTAGAGCCTaGTTGGCCACCTCATGTCGT +
Preference number: 4 (lower is better)
Translates to: PAVRPVWSCPARVGMGVSRRFRA*LATSCR
Trigger: ACGACATGAGGTGGCCAAGCAGGCTCTAAACCGCCT...AGACACCCCCATCCCCACGCGGGCCGGGCACGACCACACCGGGCGGACCGCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR GCA 90 bp GTACTAAACCCTCCCTCTGGCGTGGCGTCGCCCCAGGAGCCAGCCTGGGTATGGGGTCCTGCGCTTGGCTaGCCGGTGCAGGGACCCTGG +
Preference number: 4 (lower is better)
Translates to: VLNPPSGVASPQEPAWVWGPALG*PVQGPW
Trigger: CCAGGGTCCCTGCACCGGGCAGCCAAGCGCAGGACC...CCATACCCAGGCTGGCTCCTGGGGCGACGCCACGCCAGAGGGAGGGTTTAGTAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR GCA 90 bp CCAGCGGTCCGCCCGGTGTGGTCGTGCCCGGCCCGCGTGGGGATGGGGGTGTCTGCCAGGAACAGTAGCTaGTCGTACTTGGCGCGAATC +
Preference number: 4 (lower is better)
Translates to: PAVRPVWSCPARVGMGVSARNSS*SYLARI
Trigger: GATTCGCGCCAAGTACGAGCAGCTACTGTTCCTGGC...AGACACCCCCATCCCCACGCGGGCCGGGCACGACCACACCGGGCGGACCGCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR GCA 90 bp GCTCGGGCAGGACCGGGTCTTCTTTCCGCCCCTAGGGGGCACAAGCGGGCATGTGCGGCTCCTCCGAGGTaGTCAGCGGCGCCAGGAACA +
Preference number: 4 (lower is better)
Translates to: ARAGPGLLSAPRGHKRACAAPPR*SAAPGT
Trigger: TGTTCCTGGCGCCGCTGAGCACCTCGGAGGAGCCGC...ACATGCCCGCTTGTGCCCCCTAGGGGCGGAAAGAAGACCCGGTCCTGCCCGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR GCA 90 bp GGGCATGTCCAAGCGCCTAGGAGCCCGTACCGCTGGGGACCTCCCCTTCCGCGATCACCCGGGCAGCCGTaGTGGAGAAGGATGTCGGCG +
Preference number: 4 (lower is better)
Translates to: GHVQAPRSPYRWGPPLPRSPGQP*WRRMSA
Trigger: CGCCGACATCCTTCTCCAGCACGGCTGCCCGGGTGA...TCGCGGAAGGGGAGGTCCCCAGCGGTACGGGCTCCTAGGCGCTTGGACATGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CCA 90 bp CAGCACCGGCTTCAGGCCGCTGTGGCCTTGGTGGTCCCTTTGATGGCACGGAGGGGCTGGTCCTGCGCTTaGCTGCCCGGTGCAGGGACC +
Preference number: 4 (lower is better)
Translates to: QHRLQAAVALVVPLMARRGWSCA*LPGAGT
Trigger: GGTCCCTGCACCGGGCAGCCAAGCGCAGGACCAGCC...CCTCCGTGCCATCAAAGGGACCACCAAGGCCACAGCGGCCTGAAGCCGGTGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR CCA 90 bp CCAGCGGTCCGCCCGGTGTGGTCGTGCCCGGCCCGCGTGGGGATGGGGGTGTCTTCTGCTTCTTCACCATaGGAGAAGGAGGGGGTTCCC +
Preference number: 4 (lower is better)
Translates to: PAVRPVWSCPARVGMGVSSASSP*EKEGVP
Trigger: GGGAACCCCCTCCTTCTCCCATGGTGAAGAAGCAGA...AGACACCCCCATCCCCACGCGGGCCGGGCACGACCACACCGGGCGGACCGCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CCA 90 bp GCTCGGGCAGGACCGGGTCTTCTTTCCGCCCCTAGGGGGCACAAGCGGGCATGTCGCCCAGGTTCAAGCTaGCCCACGTGGGGTTGGGGG +
Preference number: 4 (lower is better)
Translates to: ARAGPGLLSAPRGHKRACRPGSS*PTWGWG
Trigger: CCCCCAACCCCACGTGGGCCAGCTTGAACCTGGGCG...ACATGCCCGCTTGTGCCCCCTAGGGGCGGAAAGAAGACCCGGTCCTGCCCGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CCA 90 bp GCTCCCGCCCTGGGATTGTTGAGCTCGGGCAGGACCGGGTCTTCTTTCCGCCCCATGTCGGCGCACAGCTaGCTTCCAGCCTGGCGGGCG +
Preference number: 4 (lower is better)
Translates to: APALGLLSSGRTGSSFRPMSAHS*LPAWRA
Trigger: CGCCCGCCAGGCTGGAAGCCAGCTGTGCGCCGACAT...GGGGCGGAAAGAAGACCCGGTCCTGCCCGAGCTCAACAATCCCAGGGCGGGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CCA 90 bp GTCTGTCCAGCGGTCCGCCCGGTGTGGTCGTGCCCGGCCCGCGTGGGGATGGGGGTCTCCATGCCTCGTTaGGGAGAGGGAGGTGAGTTT +
Preference number: 4 (lower is better)
Translates to: VCPAVRPVWSCPARVGMGVSMPR*GEGGEF
Trigger: AAACTCACCTCCCTCTCCCCAACGAGGCATGGAGAC...CCCCATCCCCACGCGGGCCGGGCACGACCACACCGGGCGGACCGCTGGACAGAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CCA 90 bp GCCCTCCCATGTACTAAACCCTCCCTCTGGCGTGGCGTCGCCCCAGGAGCCAGCAGGAGCCCGTACCGCTaGGGACCTCCCCTTCCGCGA +
Preference number: 4 (lower is better)
Translates to: ALPCTKPSLWRGVAPGASRSPYR*GPPLPR
Trigger: TCGCGGAAGGGGAGGTCCCCAGCGGTACGGGCTCCT...GCTGGCTCCTGGGGCGACGCCACGCCAGAGGGAGGGTTTAGTACATGGGAGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CCA 90 bp GTACTAAACCCTCCCTCTGGCGTGGCGTCGCCCCAGGAGCCAGCCTGGGTATGGCCCCAGGAGCCAGCCTaGGTATGGGCTCCCGCCCTG +
Preference number: 4 (lower is better)
Translates to: VLNPPSGVASPQEPAWVWPQEPA*VWAPAL
Trigger: CAGGGCGGGAGCCCATACCCAGGCTGGCTCCTGGGG...CCATACCCAGGCTGGCTCCTGGGGCGACGCCACGCCAGAGGGAGGGTTTAGTAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CCA 90 bp GCTCCCGCCCTGGGATTGTTGAGCTCGGGCAGGACCGGGTCTTCTTTCCGCCCCTGCCCCCGCCGGCTTTaGCTCCACTCGTGGTCACGG +
Preference number: 4 (lower is better)
Translates to: APALGLLSSGRTGSSFRPCPRRL*LHSWSR
Trigger: CCGTGACCACGAGTGGAGCCAAAGCCGGCGGGGGCA...GGGGCGGAAAGAAGACCCGGTCCTGCCCGAGCTCAACAATCCCAGGGCGGGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328568.9
CDS-3UTR TCA 90 bp GGGCATGTCCAAGCGCCTAGGAGCCCGTACCGCTGGGGACCTCCCCTTCCGCGAACCTGCACTGGCTGCTaGCCCAACCCTACCCTGTCC +
Preference number: 4 (lower is better)
Translates to: GHVQAPRSPYRWGPPLPRTCTGC*PNPTLS
Trigger: GGACAGGGTAGGGTTGGGTCAGCAGCCAGTGCAGGT...TCGCGGAAGGGGAGGTCCCCAGCGGTACGGGCTCCTAGGCGCTTGGACATGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR GCA 90 bp CAGCGGTCCGCCCGGTGTGGTCGTGCCCGGCCCGCGTGGGGATGGGGGTGTCTCCTCCTCAAAACTGGCTaGCTCAAAGTGCCACGTCTG +
Preference number: 4 (lower is better)
Translates to: QRSARCGRARPAWGWGCLLLKTG*LKVPRL
Trigger: CAGACGTGGCACTTTGAGGCAGCCAGTTTTGAGGAG...GAGACACCCCCATCCCCACGCGGGCCGGGCACGACCACACCGGGCGGACCGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR GCA 90 bp CCAGCGGTCCGCCCGGTGTGGTCGTGCCCGGCCCGCGTGGGGATGGGGGTGTCTAACAACATATGGCTGTaGCCAACCTGCACTGGCTGC +
Preference number: 4 (lower is better)
Translates to: PAVRPVWSCPARVGMGVSNNIWL*PTCTGC
Trigger: GCAGCCAGTGCAGGTTGGGCACAGCCATATGTTGTT...AGACACCCCCATCCCCACGCGGGCCGGGCACGACCACACCGGGCGGACCGCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR CCA 90 bp CGTCTGTCCAGCGGTCCGCCCGGTGTGGTCGTGCCCGGCCCGCGTGGGGATGGGCCAGTCAGGAATCGGTaGATGAGCGATGACTTCCCA +
Preference number: 4 (lower is better)
Translates to: RLSSGPPGVVVPGPRGDGPVRNR*MSDDFP
Trigger: TGGGAAGTCATCGCTCATCCACCGATTCCTGACTGG...CCCATCCCCACGCGGGCCGGGCACGACCACACCGGGCGGACCGCTGGACAGACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CCA 90 bp GGGCATGTCCAAGCGCCTAGGAGCCCGTACCGCTGGGGACCTCCCCTTCCGCGACCGCGCACAGAGCTCTaGCACGAGCATCTCCCACCA +
Preference number: 4 (lower is better)
Translates to: GHVQAPRSPYRWGPPLPRPRTEL*HEHLPP
Trigger: TGGTGGGAGATGCTCGTGCCAGAGCTCTGTGCGCGG...TCGCGGAAGGGGAGGTCCCCAGCGGTACGGGCTCCTAGGCGCTTGGACATGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CCA 90 bp GTCTGTCCAGCGGTCCGCCCGGTGTGGTCGTGCCCGGCCCGCGTGGGGATGGGGAGGCCTTCACCCATCTaGACAGTGCTCATGTCCTTG +
Preference number: 4 (lower is better)
Translates to: VCPAVRPVWSCPARVGMGRPSPI*TVLMSL
Trigger: CAAGGACATGAGCACTGTCCAGATGGGTGAAGGCCT...CCCCATCCCCACGCGGGCCGGGCACGACCACACCGGGCGGACCGCTGGACAGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CCA 90 bp CAGCGGTCCGCCCGGTGTGGTCGTGCCCGGCCCGCGTGGGGATGGGGGTGTCTCAGATTGAATTCCCCTTaGCGTTCCGGATCGCCTGGA +
Preference number: 4 (lower is better)
Translates to: QRSARCGRARPAWGWGCLRLNSP*RSGSPG
Trigger: TCCAGGCGATCCGGAACGCCAAGGGGAATTCAATCT...GAGACACCCCCATCCCCACGCGGGCCGGGCACGACCACACCGGGCGGACCGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CCA 90 bp CCCTGGCTGGGAGAGGTCACGGGGGTGAGGAATGGCTCTGGAGCTGCTCCAGTGTGCGTGATGACGACGTaGGCGAGCTCGGCCGCCAGG +
Preference number: 4 (lower is better)
Translates to: PWLGEVTGVRNGSGAAPVCVMTT*ASSAAR
Trigger: CCTGGCGGCCGAGCTCGCCCACGTCGTCATCACGCA...CACTGGAGCAGCTCCAGAGCCATTCCTCACCCCCGTGACCTCTCCCAGCCAGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CCA 90 bp TTACAAGGCCCCCGCAGCCCTCTTAGCCCGCTCCTGCTCCATCCCTTCTCCCTCACCCTCCCTCTGGCGTaGCGTCGCCCCAGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: LQGPRSPLSPLLLHPFSLTLPLA*RRPRSQ
Trigger: CTGGCTCCTGGGGCGACGCCACGCCAGAGGGAGGGT...GAGGGAGAAGGGATGGAGCAGGAGCGGGCTAAGAGGGCTGCGGGGGCCTTGTAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CCA 90 bp GGGCATGTCCAAGCGCCTAGGAGCCCGTACCGCTGGGGACCTCCCCTTCCGCGAACTAAACCCTCCCTCTaGCGTGGCGTCGCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: GHVQAPRSPYRWGPPLPRTKPSL*RGVAPG
Trigger: TCCTGGGGCGACGCCACGCCAGAGGGAGGGTTTAGT...TCGCGGAAGGGGAGGTCCCCAGCGGTACGGGCTCCTAGGCGCTTGGACATGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
3UTR CAA 72 bp GAGCCAGCCTGGGTATGGGCTCCCGCCCTGGGATTGTaGAGCTCGGGCAGGACCGGGTCTTCTTTCCGCCCC +
Preference number: 4 (lower is better)
Translates to: EPAWVWAPALGL*SSGRTGSSFRP
Trigger: GGGGCGGAAAGAAGACCCGGTCCTGCCCGAGCTCAACAATCCCAGGGCGGGAGCCCATACCCAGGCTGGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR TCA 90 bp CCCTGGCTGGGAGAGGTCACGGGGGTGAGGAATGGCTCTGGAGCTGCTCCAGTGCGGAGTGGATGCAGCTaGGTGGCTTGGGGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: PWLGEVTGVRNGSGAAPVRSGCS*VAWGAG
Trigger: CCCAGCTCCCCAAGCCACTCAGCTGCATCCACTCCG...CACTGGAGCAGCTCCAGAGCCATTCCTCACCCCCGTGACCTCTCCCAGCCAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR TCA 90 bp GCCCTCCCATGTACTAAACCCTCCCTCTGGCGTGGCGTCGCCCCAGGAGCCAGCGGGTACAGTCCGTGCTaGGGGCTCGGGCCAAATTCC +
Preference number: 4 (lower is better)
Translates to: ALPCTKPSLWRGVAPGASGYSPC*GLGPNS
Trigger: GGAATTTGGCCCGAGCCCTCAGCACGGACTGTACCC...GCTGGCTCCTGGGGCGACGCCACGCCAGAGGGAGGGTTTAGTACATGGGAGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR TCA 90 bp CTGGTTTCCACTACTCACGGTCCCTTTCACGGAAAGGGTTGGGAACCCCCACCCGGCTGGGCGTGGCGGTaGTGCTGGGCGTGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: LVSTTHGPFHGKGWEPPPGWAWR*CWAWWP
Trigger: CGGCCACCACGCCCAGCATCACCGCCACGCCCAGCC...GGGTGGGGGTTCCCAACCCTTTCCGTGAAAGGGACCGTGAGTAGTGGAAACCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR TCA 90 bp CCACCTTTCCTGGGTCACGCCGCTGTGCTGGGTGGTCACAGCCTAGGACCCTGTCCGCCCTGGGATTGTTaGGCTCGGGCAGGACCGGGT +
Preference number: 4 (lower is better)
Translates to: PPFLGHAAVLGGHSLGPCPPWDC*ARAGPG
Trigger: ACCCGGTCCTGCCCGAGCTCAACAATCCCAGGGCGG...ACAGGGTCCTAGGCTGTGACCACCCAGCACAGCGGCGTGACCCAGGAAAGGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR TCA 90 bp CCCTGGCTGGGAGAGGTCACGGGGGTGAGGAATGGCTCTGGAGCTGCTCCAGTGCTCTGGAACACCCCCTaGCGAGGCCAGGGGAGGAAC +
Preference number: 4 (lower is better)
Translates to: PWLGEVTGVRNGSGAAPVLWNTP*RGQGRN
Trigger: GTTCCTCCCCTGGCCTCGTCAGGGGGTGTTCCAGAG...CACTGGAGCAGCTCCAGAGCCATTCCTCACCCCCGTGACCTCTCCCAGCCAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR GCA 90 bp TTACAAGGCCCCCGCAGCCCTCTTAGCCCGCTCCTGCTCCATCCCTTCTCCCTCCTGCCGGTGCCAGGGTaGGGAGAGGATGAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: LQGPRSPLSPLLLHPFSLLPVPG*GEDEPG
Trigger: CCCTGGCTCATCCTCTCCGCACCCTGGCACCGGCAG...GAGGGAGAAGGGATGGAGCAGGAGCGGGCTAAGAGGGCTGCGGGGGCCTTGTAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328568.9
CDS-3UTR GCA 90 bp GCTCCCGCCCTGGGATTGTTGAGCTCGGGCAGGACCGGGTCTTCTTTCCGCCCCTCGTGGTCACGGTCTTaGAAGGCTTGGGAGCCGGCG +
Preference number: 4 (lower is better)
Translates to: APALGLLSSGRTGSSFRPSWSRS*KAWEPA
Trigger: CGCCGGCTCCCAAGCCTTGCAAGACCGTGACCACGA...GGGGCGGAAAGAAGACCCGGTCCTGCCCGAGCTCAACAATCCCAGGGCGGGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328568.9
CDS-3UTR CCA 90 bp CCAGCGGTCCGCCCGGTGTGGTCGTGCCCGGCCCGCGTGGGGATGGGGGTGTCTTTTGGATGTCTGATCTaGTGGTGGCTGCAGGGAACT +
Preference number: 4 (lower is better)
Translates to: PAVRPVWSCPARVGMGVSFGCLI*WWLQGT
Trigger: AGTTCCCTGCAGCCACCACCAGATCAGACATCCAAA...AGACACCCCCATCCCCACGCGGGCCGGGCACGACCACACCGGGCGGACCGCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CCA 90 bp GTCTGTCCAGCGGTCCGCCCGGTGTGGTCGTGCCCGGCCCGCGTGGGGATGGGGGCTTCAGCAGGTGTTTaGATGTCTGATCTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: VCPAVRPVWSCPARVGMGASAGV*MSDLVV
Trigger: CACCACCAGATCAGACATCCAAACACCTGCTGAAGC...CCCCATCCCCACGCGGGCCGGGCACGACCACACCGGGCGGACCGCTGGACAGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CCA 90 bp GTACTAAACCCTCCCTCTGGCGTGGCGTCGCCCCAGGAGCCAGCCTGGGTATGGTCCGGATCGCCTGGATaGCCACGGCCTCGCTTTGGC +
Preference number: 4 (lower is better)
Translates to: VLNPPSGVASPQEPAWVWSGSPG*PRPRFG
Trigger: GCCAAAGCGAGGCCGTGGCCATCCAGGCGATCCGGA...CCATACCCAGGCTGGCTCCTGGGGCGACGCCACGCCAGAGGGAGGGTTTAGTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CCA 90 bp TTACAAGGCCCCCGCAGCCCTCTTAGCCCGCTCCTGCTCCATCCCTTCTCCCTCCGCCCAGGTTCAAGCTaGCCCACGTGGGGTTGGGGG +
Preference number: 4 (lower is better)
Translates to: LQGPRSPLSPLLLHPFSLRPGSS*PTWGWG
Trigger: CCCCCAACCCCACGTGGGCCAGCTTGAACCTGGGCG...GAGGGAGAAGGGATGGAGCAGGAGCGGGCTAAGAGGGCTGCGGGGGCCTTGTAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CCA 90 bp GTATGGGCTCCCGCCCTGGGATTGTTGAGCTCGGGCAGGACCGGGTCTTCTTTCACGGTAGCCACGTCCTaGGCCTGCACGGCGGCCCAC +
Preference number: 4 (lower is better)
Translates to: VWAPALGLLSSGRTGSSFTVATS*ACTAAH
Trigger: GTGGGCCGCCGTGCAGGCCCAGGACGTGGCTACCGT...GAAAGAAGACCCGGTCCTGCCCGAGCTCAACAATCCCAGGGCGGGAGCCCATAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CCA 90 bp GCCCTCCCATGTACTAAACCCTCCCTCTGGCGTGGCGTCGCCCCAGGAGCCAGCGGCCCGTGTCGCGCATaGGCCAAAAGCAGGAGAACG +
Preference number: 4 (lower is better)
Translates to: ALPCTKPSLWRGVAPGASGPCRA*AKSRRT
Trigger: CGTTCTCCTGCTTTTGGCCCATGCGCGACACGGGCC...GCTGGCTCCTGGGGCGACGCCACGCCAGAGGGAGGGTTTAGTACATGGGAGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CCA 90 bp GCTCCCGCCCTGGGATTGTTGAGCTCGGGCAGGACCGGGTCTTCTTTCCGCCCCACTAAACCCTCCCTCTaGCGTGGCGTCGCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: APALGLLSSGRTGSSFRPTKPSL*RGVAPG
Trigger: TCCTGGGGCGACGCCACGCCAGAGGGAGGGTTTAGT...GGGGCGGAAAGAAGACCCGGTCCTGCCCGAGCTCAACAATCCCAGGGCGGGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CCA 90 bp GCTCCCGCCCTGGGATTGTTGAGCTCGGGCAGGACCGGGTCTTCTTTCCGCCCCGAATCCTCTCAGCCCTaGCTGGGAGAGGTCACGGGG +
Preference number: 4 (lower is better)
Translates to: APALGLLSSGRTGSSFRPESSQP*LGEVTG
Trigger: CCCCGTGACCTCTCCCAGCCAGGGCTGAGAGGATTC...GGGGCGGAAAGAAGACCCGGTCCTGCCCGAGCTCAACAATCCCAGGGCGGGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CCA 90 bp GTCTGTCCAGCGGTCCGCCCGGTGTGGTCGTGCCCGGCCCGCGTGGGGATGGGGTTGATGGCACGGAGGTaGATAAATGCCTGCATCAGC +
Preference number: 4 (lower is better)
Translates to: VCPAVRPVWSCPARVGMGLMARR*INACIS
Trigger: GCTGATGCAGGCATTTATCCACCTCCGTGCCATCAA...CCCCATCCCCACGCGGGCCGGGCACGACCACACCGGGCGGACCGCTGGACAGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR CCA 90 bp CCCTGGCTGGGAGAGGTCACGGGGGTGAGGAATGGCTCTGGAGCTGCTCCAGTGCGCCGCTGTGCTGGGTaGTCACAGCCTAGGACCCTG +
Preference number: 4 (lower is better)
Translates to: PWLGEVTGVRNGSGAAPVRRCAG*SQPRTL
Trigger: CAGGGTCCTAGGCTGTGACCACCCAGCACAGCGGCG...CACTGGAGCAGCTCCAGAGCCATTCCTCACCCCCGTGACCTCTCCCAGCCAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR CCA 90 bp GGGCATGTCCAAGCGCCTAGGAGCCCGTACCGCTGGGGACCTCCCCTTCCGCGAGGTGACAGCAGTGGCTaGACTCGGAGTTGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: GHVQAPRSPYRWGPPLPRGDSSG*TRSWWE
Trigger: CTCCCACCAACTCCGAGTCCAGCCACTGCTGTCACC...TCGCGGAAGGGGAGGTCCCCAGCGGTACGGGCTCCTAGGCGCTTGGACATGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328568.9
3UTR CAA 72 bp CAGGAGCCAGCCTGGGTATGGGCTCCCGCCCTGGGATaGTTGAGCTCGGGCAGGACCGGGTCTTCTTTCCGC +
Preference number: 4 (lower is better)
Translates to: QEPAWVWAPALG*LSSGRTGSSFR
Trigger: GCGGAAAGAAGACCCGGTCCTGCCCGAGCTCAACAATCCCAGGGCGGGAGCCCATACCCAGGCTGGCTCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR TCA 90 bp GTGCTGAGCCTAGTGGCACTGCAGCTCATGGAGGCAGCACCGGCTTCAGGCCGCGGGTACAGTCCGTGCTaGGGGCTCGGGCCAAATTCC +
Preference number: 4 (lower is better)
Translates to: VLSLVALQLMEAAPASGRGYSPC*GLGPNS
Trigger: GGAATTTGGCCCGAGCCCTCAGCACGGACTGTACCC...GCGGCCTGAAGCCGGTGCTGCCTCCATGAGCTGCAGTGCCACTAGGCTCAGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR TCA 90 bp CCCTGGCTGGGAGAGGTCACGGGGGTGAGGAATGGCTCTGGAGCTGCTCCAGTGTGCGGATCGGAGAGGTaGGTGGGTGCGTCTGTCCAG +
Preference number: 4 (lower is better)
Translates to: PWLGEVTGVRNGSGAAPVCGSER*VGASVQ
Trigger: CTGGACAGACGCACCCACTCACCTCTCCGATCCGCA...CACTGGAGCAGCTCCAGAGCCATTCCTCACCCCCGTGACCTCTCCCAGCCAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR TCA 90 bp GTACTAAACCCTCCCTCTGGCGTGGCGTCGCCCCAGGAGCCAGCCTGGGTATGGGAGAGGTCACGGGGGTaGGGAATGGCTCTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: VLNPPSGVASPQEPAWVWERSRG*GMALEL
Trigger: CAGCTCCAGAGCCATTCCTCACCCCCGTGACCTCTC...CCATACCCAGGCTGGCTCCTGGGGCGACGCCACGCCAGAGGGAGGGTTTAGTAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR TCA 90 bp GCTCCCGCCCTGGGATTGTTGAGCTCGGGCAGGACCGGGTCTTCTTTCCGCCCCTGGCACACTTGCAGCTaGACCTCTTGGGGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: APALGLLSSGRTGSSFRPWHTCS*TSWGWW
Trigger: CCACCAGCCCCAAGAGGTTCAGCTGCAAGTGTGCCA...GGGGCGGAAAGAAGACCCGGTCCTGCCCGAGCTCAACAATCCCAGGGCGGGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR GCA 90 bp GGTTTCCACTACTCACGGTCCCTTTCACGGAAAGGGTTGGGAACCCCCACCCCCGGTCCTGCGCTTGGCTaGCCGGTGCAGGGACCCTGG +
Preference number: 4 (lower is better)
Translates to: GFHYSRSLSRKGLGTPTPGPALG*PVQGPW
Trigger: CCAGGGTCCCTGCACCGGGCAGCCAAGCGCAGGACC...GGGGGTGGGGGTTCCCAACCCTTTCCGTGAAAGGGACCGTGAGTAGTGGAAACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR GCA 90 bp CCACCCATGGGTAGGTGTAGGGGACGTCCTGGTTTCCACTACTCACGGTCCCTTGCCACGTCCTGGGCCTaGACGGCGGCCCACAGCTGG +
Preference number: 4 (lower is better)
Translates to: PPMGRCRGRPGFHYSRSLATSWA*TAAHSW
Trigger: CCAGCTGTGGGCCGCCGTGCAGGCCCAGGACGTGGC...AAGGGACCGTGAGTAGTGGAAACCAGGACGTCCCCTACACCTACCCATGGGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR GCA 90 bp CCACCCATGGGTAGGTGTAGGGGACGTCCTGGTTTCCACTACTCACGGTCCCTTGGCTACCCGCGCCCTTaGCCCCGCCGGCTTTGGCTC +
Preference number: 4 (lower is better)
Translates to: PPMGRCRGRPGFHYSRSLGYPRP*PRRLWL
Trigger: GAGCCAAAGCCGGCGGGGGCAAGGGCGCGGGTAGCC...AAGGGACCGTGAGTAGTGGAAACCAGGACGTCCCCTACACCTACCCATGGGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328568.9
CDS-3UTR CCA 90 bp GTATGGGCTCCCGCCCTGGGATTGTTGAGCTCGGGCAGGACCGGGTCTTCTTTCGGCCAAAGGCAGAGATaGCCCTCGGGGGCCGCTTGC +
Preference number: 4 (lower is better)
Translates to: VWAPALGLLSSGRTGSSFGQRQR*PSGAAC
Trigger: GCAAGCGGCCCCCGAGGGCCATCTCTGCCTTTGGCC...GAAAGAAGACCCGGTCCTGCCCGAGCTCAACAATCCCAGGGCGGGAGCCCATAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CCA 90 bp TCTGCCTGTCCCTGTCCAACCCCAGTACCCCATCTTGACCAAGGCCATGCCCTGAGTCCCGCGAGGGCTTaGCACGGCCTCGCGTGTCGC +
Preference number: 4 (lower is better)
Translates to: SACPCPTPVPHLDQGHALSPARA*HGLACR
Trigger: GCGACACGCGAGGCCGTGCCAAGCCCTCGCGGGACT...CAGGGCATGGCCTTGGTCAAGATGGGGTACTGGGGTTGGACAGGGACAGGCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR CCA 90 bp TTACAAGGCCCCCGCAGCCCTCTTAGCCCGCTCCTGCTCCATCCCTTCTCCCTCGTCTTCTGGAAGGCGTaGGGGCTGTGCCCTCGTGGG +
Preference number: 4 (lower is better)
Translates to: LQGPRSPLSPLLLHPFSLVFWKA*GLCPRG
Trigger: CCCACGAGGGCACAGCCCCCACGCCTTCCAGAAGAC...GAGGGAGAAGGGATGGAGCAGGAGCGGGCTAAGAGGGCTGCGGGGGCCTTGTAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CCA 90 bp GCCCTCCCATGTACTAAACCCTCCCTCTGGCGTGGCGTCGCCCCAGGAGCCAGCCACGGGGGTGAGGAATaGCTCTGGAGCTGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: ALPCTKPSLWRGVAPGASHGGEE*LWSCSS
Trigger: ACTGGAGCAGCTCCAGAGCCATTCCTCACCCCCGTG...GCTGGCTCCTGGGGCGACGCCACGCCAGAGGGAGGGTTTAGTACATGGGAGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR TCA 90 bp GCCCTCCCATGTACTAAACCCTCCCTCTGGCGTGGCGTCGCCCCAGGAGCCAGCGTAGGAAGCTCTGTTTaGTGGGGATGGCTCGCCCAC +
Preference number: 4 (lower is better)
Translates to: ALPCTKPSLWRGVAPGASVGSSV*WGWLAH
Trigger: GTGGGCGAGCCATCCCCATCAAACAGAGCTTCCTAC...GCTGGCTCCTGGGGCGACGCCACGCCAGAGGGAGGGTTTAGTACATGGGAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR TCA 90 bp TTACAAGGCCCCCGCAGCCCTCTTAGCCCGCTCCTGCTCCATCCCTTCTCCCTCGAGAGGTCACGGGGGTaGGGAATGGCTCTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: LQGPRSPLSPLLLHPFSLERSRG*GMALEL
Trigger: CAGCTCCAGAGCCATTCCTCACCCCCGTGACCTCTC...GAGGGAGAAGGGATGGAGCAGGAGCGGGCTAAGAGGGCTGCGGGGGCCTTGTAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR TCA 90 bp GCTCGGGCAGGACCGGGTCTTCTTTCCGCCCCTAGGGGGCACAAGCGGGCATGTAAGACCGGAAACCACTaGCACAGACAGCCCAAGGGC +
Preference number: 4 (lower is better)
Translates to: ARAGPGLLSAPRGHKRACKTGNH*HRQPKG
Trigger: GCCCTTGGGCTGTCTGTGTCAGTGGTTTCCGGTCTT...ACATGCCCGCTTGTGCCCCCTAGGGGCGGAAAGAAGACCCGGTCCTGCCCGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR TCA 90 bp CAGCACCGGCTTCAGGCCGCTGTGGCCTTGGTGGTCCCTTTGATGGCACGGAGGCCCAGTACCCCATCTTaGCCAAGGCCATGCCCTGAC +
Preference number: 4 (lower is better)
Translates to: QHRLQAAVALVVPLMARRPSTPS*PRPCPD
Trigger: GTCAGGGCATGGCCTTGGTCAAGATGGGGTACTGGG...CCTCCGTGCCATCAAAGGGACCACCAAGGCCACAGCGGCCTGAAGCCGGTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR TCA 90 bp CTGGTTTCCACTACTCACGGTCCCTTTCACGGAAAGGGTTGGGAACCCCCACCCAGGGTGCGGAGAGGATaGGCCAGGGATGCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: LVSTTHGPFHGKGWEPPPRVRRG*ARDAAA
Trigger: GGCGGCGGCATCCCTGGCTCATCCTCTCCGCACCCT...GGGTGGGGGTTCCCAACCCTTTCCGTGAAAGGGACCGTGAGTAGTGGAAACCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328568.9
CDS-3UTR GCA 90 bp GCCCTCCCATGTACTAAACCCTCCCTCTGGCGTGGCGTCGCCCCAGGAGCCAGCCCAATGAGGCCTGGATaGTGTCCTGGAGTTCGGGGT +
Preference number: 4 (lower is better)
Translates to: ALPCTKPSLWRGVAPGASPMRPG*CPGVRG
Trigger: ACCCCGAACTCCAGGACAGCATCCAGGCCTCATTGG...GCTGGCTCCTGGGGCGACGCCACGCCAGAGGGAGGGTTTAGTACATGGGAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR GCA 90 bp GCTCGGGCAGGACCGGGTCTTCTTTCCGCCCCTAGGGGGCACAAGCGGGCATGTGCCAGAAGCTGTTGCTaGTTGCGCAAGGTCACCACC +
Preference number: 4 (lower is better)
Translates to: ARAGPGLLSAPRGHKRACARSCC*LRKVTT
Trigger: GGTGGTGACCTTGCGCAAGCAGCAACAGCTTCTGGC...ACATGCCCGCTTGTGCCCCCTAGGGGCGGAAAGAAGACCCGGTCCTGCCCGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR GCA 90 bp GCTCGGGCAGGACCGGGTCTTCTTTCCGCCCCTAGGGGGCACAAGCGGGCATGTAGCTGGGCAGGGACTTaGAGGCAGCCAGAAGCTGTT +
Preference number: 4 (lower is better)
Translates to: ARAGPGLLSAPRGHKRACSWAGT*RQPEAV
Trigger: AACAGCTTCTGGCTGCCTGCAAGTCCCTGCCCAGCT...ACATGCCCGCTTGTGCCCCCTAGGGGCGGAAAGAAGACCCGGTCCTGCCCGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR GCA 90 bp GCCCTCTTAGCCCGCTCCTGCTCCATCCCTTCTCCCTCCCAAGATAGTAGTGGGTCCAGCCACTGCAGCTaGCTCGGCTCGGAGCTCCCG +
Preference number: 4 (lower is better)
Translates to: ALLARSCSIPSPSQDSSGSSHCS*LGSELP
Trigger: CGGGAGCTCCGAGCCGAGGCAGCTGCAGTGGCTGGA...CCCACTACTATCTTGGGAGGGAGAAGGGATGGAGCAGGAGCGGGCTAAGAGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR GCA 90 bp AACCCCGAGCGGGTAGACCCAGAGCAATCCGAGTGTGGAAACAATGGAGAGGGGCGCTTGGCTGCCCGGTaGAGGGACCCTGGGGTGCTC +
Preference number: 4 (lower is better)
Translates to: NPERVDPEQSECGNNGEGRLAAR*RDPGVL
Trigger: GAGCACCCCAGGGTCCCTGCACCGGGCAGCCAAGCG...CCCCTCTCCATTGTTTCCACACTCGGATTGCTCTGGGTCTACCCGCTCGGGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR GCA 90 bp GGGCATGTCCAAGCGCCTAGGAGCCCGTACCGCTGGGGACCTCCCCTTCCGCGAGCCAGGAACAGTAGCTaGTCGTACTTGGCGCGAATC +
Preference number: 4 (lower is better)
Translates to: GHVQAPRSPYRWGPPLPRARNSS*SYLARI
Trigger: GATTCGCGCCAAGTACGAGCAGCTACTGTTCCTGGC...TCGCGGAAGGGGAGGTCCCCAGCGGTACGGGCTCCTAGGCGCTTGGACATGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR GCA 90 bp CCACCTTTCCTGGGTCACGCCGCTGTGCTGGGTGGTCACAGCCTAGGACCCTGTGAATGGCTCTGGAGCTaGTCCAGTGGGAGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: PPFLGHAAVLGGHSLGPCEWLWS*SSGREG
Trigger: CCCCTCCCTCCCACTGGAGCAGCTCCAGAGCCATTC...ACAGGGTCCTAGGCTGTGACCACCCAGCACAGCGGCGTGACCCAGGAAAGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR GCA 90 bp CCACCTTTCCTGGGTCACGCCGCTGTGCTGGGTGGTCACAGCCTAGGACCCTGTAGTGGGAGGCACCTCTaGCTGTCCCTGTCCAACCCC +
Preference number: 4 (lower is better)
Translates to: PPFLGHAAVLGGHSLGPCSGRHL*LSLSNP
Trigger: GGGGTTGGACAGGGACAGGCAGAGGTGCCTCCCACT...ACAGGGTCCTAGGCTGTGACCACCCAGCACAGCGGCGTGACCCAGGAAAGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR GCA 90 bp GGGCATGTCCAAGCGCCTAGGAGCCCGTACCGCTGGGGACCTCCCCTTCCGCGACCACTGACTCCAACCTaGCCACGTCCTCCACTACAT +
Preference number: 4 (lower is better)
Translates to: GHVQAPRSPYRWGPPLPRPLTPT*PRPPLH
Trigger: ATGTAGTGGAGGACGTGGGCAGGTTGGAGTCAGTGG...TCGCGGAAGGGGAGGTCCCCAGCGGTACGGGCTCCTAGGCGCTTGGACATGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR CCA 90 bp CCACCTTTCCTGGGTCACGCCGCTGTGCTGGGTGGTCACAGCCTAGGACCCTGTGCCTGGATGCTGTCCTaGAGTTCGGGGTCGTCCACC +
Preference number: 4 (lower is better)
Translates to: PPFLGHAAVLGGHSLGPCAWMLS*SSGSST
Trigger: GGTGGACGACCCCGAACTCCAGGACAGCATCCAGGC...ACAGGGTCCTAGGCTGTGACCACCCAGCACAGCGGCGTGACCCAGGAAAGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR CCA 90 bp GCCCTCTTAGCCCGCTCCTGCTCCATCCCTTCTCCCTCCCAAGATAGTAGTGGGGGCCAAAGGCAGAGATaGCCCTCGGGGGCCGCTTGC +
Preference number: 4 (lower is better)
Translates to: ALLARSCSIPSPSQDSSGGQRQR*PSGAAC
Trigger: GCAAGCGGCCCCCGAGGGCCATCTCTGCCTTTGGCC...CCCACTACTATCTTGGGAGGGAGAAGGGATGGAGCAGGAGCGGGCTAAGAGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CCA 90 bp CAGCACCGGCTTCAGGCCGCTGTGGCCTTGGTGGTCCCTTTGATGGCACGGAGGGCTGGGGCTAGGGCTTaGCATGGGAGTAGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: QHRLQAAVALVVPLMARRAGARA*HGSSGF
Trigger: GAAGCCACTACTCCCATGCCAAGCCCTAGCCCCAGC...CCTCCGTGCCATCAAAGGGACCACCAAGGCCACAGCGGCCTGAAGCCGGTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR CCA 90 bp GTACTAAACCCTCCCTCTGGCGTGGCGTCGCCCCAGGAGCCAGCCTGGGTATGGGCTGGGGCTAGGGCTTaGCATGGGAGTAGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: VLNPPSGVASPQEPAWVWAGARA*HGSSGF
Trigger: GAAGCCACTACTCCCATGCCAAGCCCTAGCCCCAGC...CCATACCCAGGCTGGCTCCTGGGGCGACGCCACGCCAGAGGGAGGGTTTAGTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CCA 90 bp GCTCCCGCCCTGGGATTGTTGAGCTCGGGCAGGACCGGGTCTTCTTTCCGCCCCGGATGTCTGATCTGGTaGTGGCTGCAGGGAACTGGG +
Preference number: 4 (lower is better)
Translates to: APALGLLSSGRTGSSFRPGCLIW*WLQGTG
Trigger: CCCAGTTCCCTGCAGCCACCACCAGATCAGACATCC...GGGGCGGAAAGAAGACCCGGTCCTGCCCGAGCTCAACAATCCCAGGGCGGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CCA 90 bp GCCCTCCCATGTACTAAACCCTCCCTCTGGCGTGGCGTCGCCCCAGGAGCCAGCGTAGCTGCTCGTACTTaGCGCGAATCCACGACTCGC +
Preference number: 4 (lower is better)
Translates to: ALPCTKPSLWRGVAPGASVAART*RESTTR
Trigger: GCGAGTCGTGGATTCGCGCCAAGTACGAGCAGCTAC...GCTGGCTCCTGGGGCGACGCCACGCCAGAGGGAGGGTTTAGTACATGGGAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CCA 90 bp GTGCTGTGTCCTCAGTTCAGTGGCACACTTGCAGCTGAACCTCTTGGGGCTGGTCGGCCCGCGTGGGGATaGGGGTGTCTCTCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: VLCPQFSGTLAAEPLGAGRPAWG*GCLSRW
Trigger: CCAGCGGGAGAGACACCCCCATCCCCACGCGGGCCG...ACCAGCCCCAAGAGGTTCAGCTGCAAGTGTGCCACTGAACTGAGGACACAGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR CCA 90 bp TTACAAGGCCCCCGCAGCCCTCTTAGCCCGCTCCTGCTCCATCCCTTCTCCCTCGGGGGCGTGTTGAGCTaGGGTCTCCATGCCTCGTTG +
Preference number: 4 (lower is better)
Translates to: LQGPRSPLSPLLLHPFSLGGVLS*GLHASL
Trigger: CAACGAGGCATGGAGACCCCAGCTCAACACGCCCCC...GAGGGAGAAGGGATGGAGCAGGAGCGGGCTAAGAGGGCTGCGGGGGCCTTGTAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CCA 90 bp GTATGGGCTCCCGCCCTGGGATTGTTGAGCTCGGGCAGGACCGGGTCTTCTTTCTGCCACCAGCCCCAGTaGGAGGCACCTCTGCCTGTC +
Preference number: 4 (lower is better)
Translates to: VWAPALGLLSSGRTGSSFCHQPQ*EAPLPV
Trigger: GACAGGCAGAGGTGCCTCCCACTGGGGCTGGTGGCA...GAAAGAAGACCCGGTCCTGCCCGAGCTCAACAATCCCAGGGCGGGAGCCCATAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR CCA 90 bp GTGCTGAGCCTAGTGGCACTGCAGCTCATGGAGGCAGCACCGGCTTCAGGCCGCCCACCTCCATGCCCATaGGTACTGTCCTGCCACCAG +
Preference number: 4 (lower is better)
Translates to: VLSLVALQLMEAAPASGRPPPCP*VLSCHQ
Trigger: CTGGTGGCAGGACAGTACCCATGGGCATGGAGGTGG...GCGGCCTGAAGCCGGTGCTGCCTCCATGAGCTGCAGTGCCACTAGGCTCAGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR CCA 90 bp GCTCCCGCCCTGGGATTGTTGAGCTCGGGCAGGACCGGGTCTTCTTTCCGCCCCTTTCAGCCCCGGAGCTaGAGGCTCCAGAGTGATTGG +
Preference number: 4 (lower is better)
Translates to: APALGLLSSGRTGSSFRPFQPRS*RLQSDW
Trigger: CCAATCACTCTGGAGCCTCCAGCTCCGGGGCTGAAA...GGGGCGGAAAGAAGACCCGGTCCTGCCCGAGCTCAACAATCCCAGGGCGGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328568.9
CDS-3UTR TCA 90 bp AACCCCGAGCGGGTAGACCCAGAGCAATCCGAGTGTGGAAACAATGGAGAGGGGCCGCCCTGGGATTGTTaGGCTCGGGCAGGACCGGGT +
Preference number: 4 (lower is better)
Translates to: NPERVDPEQSECGNNGEGPPWDC*ARAGPG
Trigger: ACCCGGTCCTGCCCGAGCTCAACAATCCCAGGGCGG...CCCCTCTCCATTGTTTCCACACTCGGATTGCTCTGGGTCTACCCGCTCGGGGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR TCA 90 bp GGGAACAAAGCAATAAATTACAAGGCCCCCGCAGCCCTCTTAGCCCGCTCCTGCCTCGCTTTCGGGCCATaGCAGGCGGCTACCCGCGCC +
Preference number: 4 (lower is better)
Translates to: GNKAINYKAPAALLARSCLAFGP*QAATRA
Trigger: GGCGCGGGTAGCCGCCTGTCATGGCCCGAAAGCGAG...GCAGGAGCGGGCTAAGAGGGCTGCGGGGGCCTTGTAATTTATTGCTTTGTTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328568.9
CDS-3UTR TCA 90 bp CCACCCATGGGTAGGTGTAGGGGACGTCCTGGTTTCCACTACTCACGGTCCCTTGCGCGGAAGCAGCGGTaGCAGCAGTGGCTGGACTCG +
Preference number: 4 (lower is better)
Translates to: PPMGRCRGRPGFHYSRSLARKQR*QQWLDS
Trigger: CGAGTCCAGCCACTGCTGTCACCGCTGCTTCCGCGC...AAGGGACCGTGAGTAGTGGAAACCAGGACGTCCCCTACACCTACCCATGGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328568.9
CDS-3UTR GCA 90 bp GTGCTGAGCCTAGTGGCACTGCAGCTCATGGAGGCAGCACCGGCTTCAGGCCGCGCCAGAAGCTGTTGCTaGTTGCGCAAGGTCACCACC +
Preference number: 4 (lower is better)
Translates to: VLSLVALQLMEAAPASGRARSCC*LRKVTT
Trigger: GGTGGTGACCTTGCGCAAGCAGCAACAGCTTCTGGC...GCGGCCTGAAGCCGGTGCTGCCTCCATGAGCTGCAGTGCCACTAGGCTCAGCAC
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR GCA 90 bp CCCTGGCTGGGAGAGGTCACGGGGGTGAGGAATGGCTCTGGAGCTGCTCCAGTGGCAGCCAGAAGCTGTTaGTGCTTGCGCAAGGTCACC +
Preference number: 4 (lower is better)
Translates to: PWLGEVTGVRNGSGAAPVAARSC*CLRKVT
Trigger: GGTGACCTTGCGCAAGCAGCAACAGCTTCTGGCTGC...CACTGGAGCAGCTCCAGAGCCATTCCTCACCCCCGTGACCTCTCCCAGCCAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR GCA 90 bp GCCCTCTTAGCCCGCTCCTGCTCCATCCCTTCTCCCTCCCAAGATAGTAGTGGGGGAGAGGTGAGTGGGTaGGTCTGTCCAGCGGTCCGC +
Preference number: 4 (lower is better)
Translates to: ALLARSCSIPSPSQDSSGGEVSG*VCPAVR
Trigger: GCGGACCGCTGGACAGACGCACCCACTCACCTCTCC...CCCACTACTATCTTGGGAGGGAGAAGGGATGGAGCAGGAGCGGGCTAAGAGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR GCA 90 bp AACCCCGAGCGGGTAGACCCAGAGCAATCCGAGTGTGGAAACAATGGAGAGGGGGCTCCCTGGACCCGCTaGCAGAAGACAGGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: NPERVDPEQSECGNNGEGAPWTR*QKTGWG
Trigger: CCCCCAGCCTGTCTTCTGGCAGCGGGTCCAGGGAGC...CCCCTCTCCATTGTTTCCACACTCGGATTGCTCTGGGTCTACCCGCTCGGGGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328568.9
CDS-3UTR CCA 90 bp GCTCGGGCAGGACCGGGTCTTCTTTCCGCCCCTAGGGGGCACAAGCGGGCATGTTTCTGGGCCACCTCCTaGAAGACCCGATCCACATTG +
Preference number: 4 (lower is better)
Translates to: ARAGPGLLSAPRGHKRACFWATS*KTRSTL
Trigger: CAATGTGGATCGGGTCTTCCAGGAGGTGGCCCAGAA...ACATGCCCGCTTGTGCCCCCTAGGGGCGGAAAGAAGACCCGGTCCTGCCCGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CCA 90 bp CCCAGATCACCACGGGCGCTGCACAGTCACAGGTACGCAGTCACGGTCACAGACCAGGGTCAGCTCCCGTaGCCAGTCGTCCAAGTCCAG +
Preference number: 4 (lower is better)
Translates to: PRSPRALHSHRYAVTVTDQGQLP*PVVQVQ
Trigger: CTGGACTTGGACGACTGGCCACGGGAGCTGACCCTG...GTCTGTGACCGTGACTGCGTACCTGTGACTGTGCAGCGCCCGTGGTGATCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CCA 90 bp AACCCCGAGCGGGTAGACCCAGAGCAATCCGAGTGTGGAAACAATGGAGAGGGGTGCGTGATGACGACGTaGGCGAGCTCGGCCGCCAGG +
Preference number: 4 (lower is better)
Translates to: NPERVDPEQSECGNNGEGCVMTT*ASSAAR
Trigger: CCTGGCGGCCGAGCTCGCCCACGTCGTCATCACGCA...CCCCTCTCCATTGTTTCCACACTCGGATTGCTCTGGGTCTACCCGCTCGGGGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CCA 90 bp TCTGCCTGTCCCTGTCCAACCCCAGTACCCCATCTTGACCAAGGCCATGCCCTGGAGCCAGCCTGGGTATaGGCTCCCGCCCTGGGATTG +
Preference number: 4 (lower is better)
Translates to: SACPCPTPVPHLDQGHALEPAWV*APALGL
Trigger: CAATCCCAGGGCGGGAGCCCATACCCAGGCTGGCTC...CAGGGCATGGCCTTGGTCAAGATGGGGTACTGGGGTTGGACAGGGACAGGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR CCA 90 bp GTGCTGTGTCCTCAGTTCAGTGGCACACTTGCAGCTGAACCTCTTGGGGCTGGTCCCCAGGAGCCAGCCTaGGTATGGGCTCCCGCCCTG +
Preference number: 4 (lower is better)
Translates to: VLCPQFSGTLAAEPLGAGPQEPA*VWAPAL
Trigger: CAGGGCGGGAGCCCATACCCAGGCTGGCTCCTGGGG...ACCAGCCCCAAGAGGTTCAGCTGCAAGTGTGCCACTGAACTGAGGACACAGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR CCA 90 bp ATGGCTGTGCCCAACCTGCACTGGCTGCTGACCCAACCCTACCCTGTCCAGCCCGTGCCCAACCTGCACTaGCTGCTGACCCAACCCTAC +
Preference number: 4 (lower is better)
Translates to: MAVPNLHWLLTQPYPVQPVPNLH*LLTQPY
Trigger: GTAGGGTTGGGTCAGCAGCCAGTGCAGGTTGGGCAC...GGGCTGGACAGGGTAGGGTTGGGTCAGCAGCCAGTGCAGGTTGGGCACAGCCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR CCA 90 bp TTACAAGGCCCCCGCAGCCCTCTTAGCCCGCTCCTGCTCCATCCCTTCTCCCTCACCTCTTGGGGCTGGTaGGCACCAAGGGTCAGAAGC +
Preference number: 4 (lower is better)
Translates to: LQGPRSPLSPLLLHPFSLTSWGW*APRVRS
Trigger: GCTTCTGACCCTTGGTGCCCACCAGCCCCAAGAGGT...GAGGGAGAAGGGATGGAGCAGGAGCGGGCTAAGAGGGCTGCGGGGGCCTTGTAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR CCA 90 bp CCAGCGGTCCGCCCGGTGTGGTCGTGCCCGGCCCGCGTGGGGATGGGGGTGTCTCTCAAAGTCCATTCCTaGCTATTGATCACAGCCTTA +
Preference number: 4 (lower is better)
Translates to: PAVRPVWSCPARVGMGVSLKVHS*LLITAL
Trigger: TAAGGCTGTGATCAATAGCCAGGAATGGACTTTGAG...AGACACCCCCATCCCCACGCGGGCCGGGCACGACCACACCGGGCGGACCGCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328568.9
CDS-3UTR TCA 90 bp GGGCATGTCCAAGCGCCTAGGAGCCCGTACCGCTGGGGACCTCCCCTTCCGCGATCTCATCCTCCAGGCTaGAGACGAAGATCACAGCAT +
Preference number: 4 (lower is better)
Translates to: GHVQAPRSPYRWGPPLPRSHPPG*RRRSQH
Trigger: ATGCTGTGATCTTCGTCTTCAGCCTGGAGGATGAGA...TCGCGGAAGGGGAGGTCCCCAGCGGTACGGGCTCCTAGGCGCTTGGACATGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR TCA 90 bp TTACAAGGCCCCCGCAGCCCTCTTAGCCCGCTCCTGCTCCATCCCTTCTCCCTCGAGGGGAGGAAGCACTaGTCCTGTCTTGTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: LQGPRSPLSPLLLHPFSLEGRKH*SCLVSP
Trigger: TGGGGACACAAGACAGGATCAGTGCTTCCTCCCCTC...GAGGGAGAAGGGATGGAGCAGGAGCGGGCTAAGAGGGCTGCGGGGGCCTTGTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR TCA 90 bp CTGGTTTCCACTACTCACGGTCCCTTTCACGGAAAGGGTTGGGAACCCCCACCCCGGAGTGGATGCAGCTaGGTGGCTTGGGGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: LVSTTHGPFHGKGWEPPPRSGCS*VAWGAG
Trigger: CCCAGCTCCCCAAGCCACTCAGCTGCATCCACTCCG...GGGTGGGGGTTCCCAACCCTTTCCGTGAAAGGGACCGTGAGTAGTGGAAACCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR TCA 90 bp GTACTAAACCCTCCCTCTGGCGTGGCGTCGCCCCAGGAGCCAGCCTGGGTATGGGTGACCAACATTCGGTaGGGACGGGAGGGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: VLNPPSGVASPQEPAWVWVTNIR*GREGRR
Trigger: TCTTCTTCCCTCCCGTCCTCACCGAATGTTGGTCAC...CCATACCCAGGCTGGCTCCTGGGGCGACGCCACGCCAGAGGGAGGGTTTAGTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR TCA 90 bp GCCCTCTTAGCCCGCTCCTGCTCCATCCCTTCTCCCTCCCAAGATAGTAGTGGGTGCGGATCGGAGAGGTaGGTGGGTGCGTCTGTCCAG +
Preference number: 4 (lower is better)
Translates to: ALLARSCSIPSPSQDSSGCGSER*VGASVQ
Trigger: CTGGACAGACGCACCCACTCACCTCTCCGATCCGCA...CCCACTACTATCTTGGGAGGGAGAAGGGATGGAGCAGGAGCGGGCTAAGAGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR TCA 90 bp TGTGCTGAGCCTAGTGGCACTGCAGCTCATGGAGGCAGCACCGGCTTCAGGCCGACCAAGGCCATGCCCTaGCCTGCCTCCAAGAACAGA +
Preference number: 4 (lower is better)
Translates to: CAEPSGTAAHGGSTGFRPTKAMP*PASKNR
Trigger: TCTGTTCTTGGAGGCAGGTCAGGGCATGGCCTTGGT...CGGCCTGAAGCCGGTGCTGCCTCCATGAGCTGCAGTGCCACTAGGCTCAGCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR GCA 90 bp CGTCTGTCCAGCGGTCCGCCCGGTGTGGTCGTGCCCGGCCCGCGTGGGGATGGGATTTCTTTCTTGTACTaGTCACTCTCTGTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: RLSSGPPGVVVPGPRGDGISFLY*SLSVFS
Trigger: GGAGAAGACAGAGAGTGAGCAGTACAAGAAAGAAAT...CCCATCCCCACGCGGGCCGGGCACGACCACACCGGGCGGACCGCTGGACAGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR GCA 90 bp CAGCACCGGCTTCAGGCCGCTGTGGCCTTGGTGGTCCCTTTGATGGCACGGAGGGAACTTGGCATCAGGTaGCCCAGCTTCCTCTCGGAT +
Preference number: 4 (lower is better)
Translates to: QHRLQAAVALVVPLMARRELGIR*PSFLSD
Trigger: ATCCGAGAGGAAGCTGGGGCACCTGATGCCAAGTTC...CCTCCGTGCCATCAAAGGGACCACCAAGGCCACAGCGGCCTGAAGCCGGTGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR GCA 90 bp TTACAAGGCCCCCGCAGCCCTCTTAGCCCGCTCCTGCTCCATCCCTTCTCCCTCCGAAGGGAACTCAGCTaGCCATGGAGACGGCTCACA +
Preference number: 4 (lower is better)
Translates to: LQGPRSPLSPLLLHPFSLRRELS*PWRRLT
Trigger: TGTGAGCCGTCTCCATGGGCAGCTGAGTTCCCTTCG...GAGGGAGAAGGGATGGAGCAGGAGCGGGCTAAGAGGGCTGCGGGGGCCTTGTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR GCA 90 bp GGGCATGTCCAAGCGCCTAGGAGCCCGTACCGCTGGGGACCTCCCCTTCCGCGAAAGTCTCATAGTAGCTaGAGCGTTTCATGTCCGCGC +
Preference number: 4 (lower is better)
Translates to: GHVQAPRSPYRWGPPLPRKSHSS*SVSCPR
Trigger: GCGCGGACATGAAACGCTGCAGCTACTATGAGACTT...TCGCGGAAGGGGAGGTCCCCAGCGGTACGGGCTCCTAGGCGCTTGGACATGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR GCA 90 bp TGGCTATGTGCTGAGCCTAGTGGCACTGCAGCTCATGGAGGCAGCACCGGCTTCGCAGGGACCCTGGGGTaGTCAATCCAGCCACTGCAG +
Preference number: 4 (lower is better)
Translates to: WLCAEPSGTAAHGGSTGFAGTLG*SIQPLQ
Trigger: CTGCAGTGGCTGGATTGAGCACCCCAGGGTCCCTGC...GAAGCCGGTGCTGCCTCCATGAGCTGCAGTGCCACTAGGCTCAGCACATAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR GCA 90 bp GCCCTCCCATGTACTAAACCCTCCCTCTGGCGTGGCGTCGCCCCAGGAGCCAGCGCAAGTCCATCTCCTTaGCGTGGGTACTGTGGATGT +
Preference number: 4 (lower is better)
Translates to: ALPCTKPSLWRGVAPGASASPSP*RGYCGC
Trigger: ACATCCACAGTACCCACGGCAAGGAGATGGACTTGC...GCTGGCTCCTGGGGCGACGCCACGCCAGAGGGAGGGTTTAGTACATGGGAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR GCA 90 bp ATGGCTGTGCCCAACCTGCACTGGCTGCTGACCCAACCCTACCCTGTCCAGCCCGCCACGTCTGACCCGTaGTGGACACGATCAGGAACT +
Preference number: 4 (lower is better)
Translates to: MAVPNLHWLLTQPYPVQPATSDP*WTRSGT
Trigger: AGTTCCTGATCGTGTCCAGCACGGGTCAGACGTGGC...GGGCTGGACAGGGTAGGGTTGGGTCAGCAGCCAGTGCAGGTTGGGCACAGCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR GCA 90 bp GCCCTCCCATGTACTAAACCCTCCCTCTGGCGTGGCGTCGCCCCAGGAGCCAGCCTCCTCAAAACTGGCTaGCTCAAAGTGCCACGTCTG +
Preference number: 4 (lower is better)
Translates to: ALPCTKPSLWRGVAPGASLLKTG*LKVPRL
Trigger: CAGACGTGGCACTTTGAGGCAGCCAGTTTTGAGGAG...GCTGGCTCCTGGGGCGACGCCACGCCAGAGGGAGGGTTTAGTACATGGGAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR GCA 90 bp AACCCCGAGCGGGTAGACCCAGAGCAATCCGAGTGTGGAAACAATGGAGAGGGGGGAGAGGTGAGTGGGTaGGTCTGTCCAGCGGTCCGC +
Preference number: 4 (lower is better)
Translates to: NPERVDPEQSECGNNGEGGEVSG*VCPAVR
Trigger: GCGGACCGCTGGACAGACGCACCCACTCACCTCTCC...CCCCTCTCCATTGTTTCCACACTCGGATTGCTCTGGGTCTACCCGCTCGGGGTT
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CCA 90 bp GGTTTCCACTACTCACGGTCCCTTTCACGGAAAGGGTTGGGAACCCCCACCCCCGTGGATGCAGCTGAGTaGCTTGGGGAGCTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: GFHYSRSLSRKGLGTPTPVDAAE*LGELGR
Trigger: CCTGCCCAGCTCCCCAAGCCACTCAGCTGCATCCAC...GGGGGTGGGGGTTCCCAACCCTTTCCGTGAAAGGGACCGTGAGTAGTGGAAACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CCA 90 bp CTGGTTTCCACTACTCACGGTCCCTTTCACGGAAAGGGTTGGGAACCCCCACCCCCGGTGCAGGGACCCTaGGGTGCTCAATCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: LVSTTHGPFHGKGWEPPPPVQGP*GAQSSH
Trigger: GTGGCTGGATTGAGCACCCCAGGGTCCCTGCACCGG...GGGTGGGGGTTCCCAACCCTTTCCGTGAAAGGGACCGTGAGTAGTGGAAACCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CCA 90 bp GTACTAAACCCTCCCTCTGGCGTGGCGTCGCCCCAGGAGCCAGCCTGGGTATGGTCTGCTTCTTCACCATaGGAGAAGGAGGGGGTTCCC +
Preference number: 4 (lower is better)
Translates to: VLNPPSGVASPQEPAWVWSASSP*EKEGVP
Trigger: GGGAACCCCCTCCTTCTCCCATGGTGAAGAAGCAGA...CCATACCCAGGCTGGCTCCTGGGGCGACGCCACGCCAGAGGGAGGGTTTAGTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CCA 90 bp TGTGCTGAGCCTAGTGGCACTGCAGCTCATGGAGGCAGCACCGGCTTCAGGCCGGTGCCCAGGTTGCGGTaGATGCCAGAACACTCGATG +
Preference number: 4 (lower is better)
Translates to: CAEPSGTAAHGGSTGFRPVPRLR*MPEHSM
Trigger: CATCGAGTGTTCTGGCATCCACCGCAACCTGGGCAC...CGGCCTGAAGCCGGTGCTGCCTCCATGAGCTGCAGTGCCACTAGGCTCAGCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR CCA 90 bp ATGGCTGTGCCCAACCTGCACTGGCTGCTGACCCAACCCTACCCTGTCCAGCCCGTAGCTGCTCGTACTTaGCGCGAATCCACGACTCGC +
Preference number: 4 (lower is better)
Translates to: MAVPNLHWLLTQPYPVQPVAART*RESTTR
Trigger: GCGAGTCGTGGATTCGCGCCAAGTACGAGCAGCTAC...GGGCTGGACAGGGTAGGGTTGGGTCAGCAGCCAGTGCAGGTTGGGCACAGCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR CCA 90 bp GGTTTCCACTACTCACGGTCCCTTTCACGGAAAGGGTTGGGAACCCCCACCCCCGGGGGCGTGTTGAGCTaGGGTCTCCATGCCTCGTTG +
Preference number: 4 (lower is better)
Translates to: GFHYSRSLSRKGLGTPTPGGVLS*GLHASL
Trigger: CAACGAGGCATGGAGACCCCAGCTCAACACGCCCCC...GGGGGTGGGGGTTCCCAACCCTTTCCGTGAAAGGGACCGTGAGTAGTGGAAACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR TCA 90 bp GCCCTCCCATGTACTAAACCCTCCCTCTGGCGTGGCGTCGCCCCAGGAGCCAGCTCTCATCCTCCAGGCTaGAGACGAAGATCACAGCAT +
Preference number: 4 (lower is better)
Translates to: ALPCTKPSLWRGVAPGASSHPPG*RRRSQH
Trigger: ATGCTGTGATCTTCGTCTTCAGCCTGGAGGATGAGA...GCTGGCTCCTGGGGCGACGCCACGCCAGAGGGAGGGTTTAGTACATGGGAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR TCA 90 bp GTATGGGCTCCCGCCCTGGGATTGTTGAGCTCGGGCAGGACCGGGTCTTCTTTCCCCGTTAATGCTGGCTaGGGGGCCAAAGGCAGAGAT +
Preference number: 4 (lower is better)
Translates to: VWAPALGLLSSGRTGSSFPVNAG*GAKGRD
Trigger: ATCTCTGCCTTTGGCCCCTCAGCCAGCATTAACGGG...GAAAGAAGACCCGGTCCTGCCCGAGCTCAACAATCCCAGGGCGGGAGCCCATAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR TCA 90 bp GTGCTGAGCCTAGTGGCACTGCAGCTCATGGAGGCAGCACCGGCTTCAGGCCGCTCCAGCCCCTCTACCTaGGTAAACACTTTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: VLSLVALQLMEAAPASGRSSPST*VNTFSC
Trigger: GCAGCTGAAAGTGTTTACTCAGGTAGAGGGGCTGGA...GCGGCCTGAAGCCGGTGCTGCCTCCATGAGCTGCAGTGCCACTAGGCTCAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR TCA 90 bp GCTCCCGCCCTGGGATTGTTGAGCTCGGGCAGGACCGGGTCTTCTTTCCGCCCCGGTTTGCTGACACCTTaGCCATTTTTCACTGGCTGG +
Preference number: 4 (lower is better)
Translates to: APALGLLSSGRTGSSFRPGLLTP*PFFTGW
Trigger: CCAGCCAGTGAAAAATGGTCAAGGTGTCAGCAAACC...GGGGCGGAAAGAAGACCCGGTCCTGCCCGAGCTCAACAATCCCAGGGCGGGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR TCA 90 bp GGGAACAAAGCAATAAATTACAAGGCCCCCGCAGCCCTCTTAGCCCGCTCCTGCCTGGAGGCTCCAGAGTaGTTGGAGGTGCAGGCCCGG +
Preference number: 4 (lower is better)
Translates to: GNKAINYKAPAALLARSCLEAPE*LEVQAR
Trigger: CCGGGCCTGCACCTCCAATCACTCTGGAGCCTCCAG...GCAGGAGCGGGCTAAGAGGGCTGCGGGGGCCTTGTAATTTATTGCTTTGTTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328568.9
CDS-3UTR GCA 90 bp AACCCCGAGCGGGTAGACCCAGAGCAATCCGAGTGTGGAAACAATGGAGAGGGGTTGTGTCCCCACCAGTaGCAAGGCCAGGCCTCCTCG +
Preference number: 4 (lower is better)
Translates to: NPERVDPEQSECGNNGEGLCPHQ*QGQASS
Trigger: CGAGGAGGCCTGGCCTTGGCACTGGTGGGGACACAA...CCCCTCTCCATTGTTTCCACACTCGGATTGCTCTGGGTCTACCCGCTCGGGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR GCA 90 bp CGTCTGTCCAGCGGTCCGCCCGGTGTGGTCGTGCCCGGCCCGCGTGGGGATGGGCTTTGTTCAAGGAATTaGCACTTCGTTTTAGTAGGA +
Preference number: 4 (lower is better)
Translates to: RLSSGPPGVVVPGPRGDGLCSRN*HFVLVG
Trigger: TCCTACTAAAACGAAGTGGCAATTCCTTGAACAAAG...CCCATCCCCACGCGGGCCGGGCACGACCACACCGGGCGGACCGCTGGACAGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR GCA 90 bp TTTAGCTTCCACCCATGGGTAGGTGTAGGGGACGTCCTGGTTTCCACTACTCACCGTAGAACAGCGCCGTaGGGCCCTGGGCGTCACGGG +
Preference number: 4 (lower is better)
Translates to: FSFHPWVGVGDVLVSTTHRRTAP*GPGRHG
Trigger: CCCGTGACGCCCAGGGCCGCACGGCGCTGTTCTACG...GTGAGTAGTGGAAACCAGGACGTCCCCTACACCTACCCATGGGTGGAAGCTAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR GCA 90 bp CCACCCATGGGTAGGTGTAGGGGACGTCCTGGTTTCCACTACTCACGGTCCCTTGAATGGCTCTGGAGCTaGTCCAGTGGGAGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: PPMGRCRGRPGFHYSRSLEWLWS*SSGREG
Trigger: CCCCTCCCTCCCACTGGAGCAGCTCCAGAGCCATTC...AAGGGACCGTGAGTAGTGGAAACCAGGACGTCCCCTACACCTACCCATGGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR GCA 90 bp TTTAGCTTCCACCCATGGGTAGGTGTAGGGGACGTCCTGGTTTCCACTACTCACAGGATGAGCCAGGGATaGCGCCGCCCGCCCGGCCTT +
Preference number: 4 (lower is better)
Translates to: FSFHPWVGVGDVLVSTTHRMSQG*RRPPGL
Trigger: AAGGCCGGGCGGGCGGCGGCATCCCTGGCTCATCCT...GTGAGTAGTGGAAACCAGGACGTCCCCTACACCTACCCATGGGTGGAAGCTAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328568.9
CDS-3UTR CCA 90 bp CAGCACCGGCTTCAGGCCGCTGTGGCCTTGGTGGTCCCTTTGATGGCACGGAGGACAACGAACTGCCTCTaGGCATGCATGTTGCCCAGA +
Preference number: 4 (lower is better)
Translates to: QHRLQAAVALVVPLMARRTTNCL*ACMLPR
Trigger: TCTGGGCAACATGCATGCCCAGAGGCAGTTCGTTGT...CCTCCGTGCCATCAAAGGGACCACCAAGGCCACAGCGGCCTGAAGCCGGTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR CCA 90 bp GCTCCCGCCCTGGGATTGTTGAGCTCGGGCAGGACCGGGTCTTCTTTCCGCCCCGTCTTCTCCAGCACCTaGTATGAGCCAGTCAGGAAT +
Preference number: 4 (lower is better)
Translates to: APALGLLSSGRTGSSFRPVFSST*YEPVRN
Trigger: ATTCCTGACTGGCTCATACCAGGTGCTGGAGAAGAC...GGGGCGGAAAGAAGACCCGGTCCTGCCCGAGCTCAACAATCCCAGGGCGGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CCA 90 bp ATGGCTGTGCCCAACCTGCACTGGCTGCTGACCCAACCCTACCCTGTCCAGCCCTTCTGGGCCACCTCCTaGAAGACCCGATCCACATTG +
Preference number: 4 (lower is better)
Translates to: MAVPNLHWLLTQPYPVQPFWATS*KTRSTL
Trigger: CAATGTGGATCGGGTCTTCCAGGAGGTGGCCCAGAA...GGGCTGGACAGGGTAGGGTTGGGTCAGCAGCCAGTGCAGGTTGGGCACAGCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR CCA 90 bp TTTAGCTTCCACCCATGGGTAGGTGTAGGGGACGTCCTGGTTTCCACTACTCACGGCTGGTCCTGCGCTTaGCTGCCCGGTGCAGGGACC +
Preference number: 4 (lower is better)
Translates to: FSFHPWVGVGDVLVSTTHGWSCA*LPGAGT
Trigger: GGTCCCTGCACCGGGCAGCCAAGCGCAGGACCAGCC...GTGAGTAGTGGAAACCAGGACGTCCCCTACACCTACCCATGGGTGGAAGCTAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CCA 90 bp GCCCTCCCATGTACTAAACCCTCCCTCTGGCGTGGCGTCGCCCCAGGAGCCAGCGCTTCAGCAGGTGTTTaGATGTCTGATCTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: ALPCTKPSLWRGVAPGASASAGV*MSDLVV
Trigger: CACCACCAGATCAGACATCCAAACACCTGCTGAAGC...GCTGGCTCCTGGGGCGACGCCACGCCAGAGGGAGGGTTTAGTACATGGGAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CCA 90 bp TTTAGCTTCCACCCATGGGTAGGTGTAGGGGACGTCCTGGTTTCCACTACTCACACGGTAGCCACGTCCTaGGCCTGCACGGCGGCCCAC +
Preference number: 4 (lower is better)
Translates to: FSFHPWVGVGDVLVSTTHTVATS*ACTAAH
Trigger: GTGGGCCGCCGTGCAGGCCCAGGACGTGGCTACCGT...GTGAGTAGTGGAAACCAGGACGTCCCCTACACCTACCCATGGGTGGAAGCTAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CCA 90 bp CCTGGTTTCCACTACTCACGGTCCCTTTCACGGAAAGGGTTGGGAACCCCCACCGGCCCGTGTCGCGCATaGGCCAAAAGCAGGAGAACG +
Preference number: 4 (lower is better)
Translates to: PGFHYSRSLSRKGLGTPTGPCRA*AKSRRT
Trigger: CGTTCTCCTGCTTTTGGCCCATGCGCGACACGGGCC...GGTGGGGGTTCCCAACCCTTTCCGTGAAAGGGACCGTGAGTAGTGGAAACCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CCA 90 bp GGGAACAAAGCAATAAATTACAAGGCCCCCGCAGCCCTCTTAGCCCGCTCCTGCGTCTTCTGGAAGGCGTaGGGGCTGTGCCCTCGTGGG +
Preference number: 4 (lower is better)
Translates to: GNKAINYKAPAALLARSCVFWKA*GLCPRG
Trigger: CCCACGAGGGCACAGCCCCCACGCCTTCCAGAAGAC...GCAGGAGCGGGCTAAGAGGGCTGCGGGGGCCTTGTAATTTATTGCTTTGTTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
3UTR CAA 72 bp CACCGGCTTCAGGCCGCTGTGGCCTTGGTGGTCCCTTaGATGGCACGGAGGTGGATAAATGCCTGCATCAGC +
Preference number: 4 (lower is better)
Translates to: HRLQAAVALVVP*MARRWINACIS
Trigger: GCTGATGCAGGCATTTATCCACCTCCGTGCCATCAAAGGGACCACCAAGGCCACAGCGGCCTGAAGCCGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR TCA 90 bp GTGCTGAGCCTAGTGGCACTGCAGCTCATGGAGGCAGCACCGGCTTCAGGCCGCTCCATTCCTGGCTATTaGTCACAGCCTCTCGAATGC +
Preference number: 4 (lower is better)
Translates to: VLSLVALQLMEAAPASGRSIPGY*SQPLEC
Trigger: GCATTCGAGAGGCTGTGATCAATAGCCAGGAATGGA...GCGGCCTGAAGCCGGTGCTGCCTCCATGAGCTGCAGTGCCACTAGGCTCAGCAC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR TCA 90 bp GTATGGGCTCCCGCCCTGGGATTGTTGAGCTCGGGCAGGACCGGGTCTTCTTTCTCAGGAATCGGTGGATaGGCGATGACTTCCCACTCC +
Preference number: 4 (lower is better)
Translates to: VWAPALGLLSSGRTGSSFSGIGG*AMTSHS
Trigger: GGAGTGGGAAGTCATCGCTCATCCACCGATTCCTGA...GAAAGAAGACCCGGTCCTGCCCGAGCTCAACAATCCCAGGGCGGGAGCCCATAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR TCA 90 bp GCCCTCTTAGCCCGCTCCTGCTCCATCCCTTCTCCCTCCCAAGATAGTAGTGGGAGCATCTGCCCAGCCTaGGAACTTGGCATCAGGTGC +
Preference number: 4 (lower is better)
Translates to: ALLARSCSIPSPSQDSSGSICPA*ELGIRC
Trigger: GCACCTGATGCCAAGTTCTCAGGCTGGGCAGATGCT...CCCACTACTATCTTGGGAGGGAGAAGGGATGGAGCAGGAGCGGGCTAAGAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR TCA 90 bp GGTTTCCACTACTCACGGTCCCTTTCACGGAAAGGGTTGGGAACCCCCACCCCCGCCGCAGCCTCCATGTaGACTGGATTCAGGTCTGGT +
Preference number: 4 (lower is better)
Translates to: GFHYSRSLSRKGLGTPTPAAASM*TGFRSG
Trigger: ACCAGACCTGAATCCAGTTCACATGGAGGCTGCGGC...GGGGGTGGGGGTTCCCAACCCTTTCCGTGAAAGGGACCGTGAGTAGTGGAAACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR TCA 90 bp GTATGGGCTCCCGCCCTGGGATTGTTGAGCTCGGGCAGGACCGGGTCTTCTTTCCTGCACCTGCACTGTTaGATCCACCTTTCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: VWAPALGLLSSGRTGSSFLHLHC*IHLSWV
Trigger: GACCCAGGAAAGGTGGATTCAACAGTGCAGGTGCAG...GAAAGAAGACCCGGTCCTGCCCGAGCTCAACAATCCCAGGGCGGGAGCCCATAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR GCA 90 bp GCCCTCTTAGCCCGCTCCTGCTCCATCCCTTCTCCCTCCCAAGATAGTAGTGGGGCAGCCAGAAGCTGTTaGTGCTTGCGCAAGGTCACC +
Preference number: 4 (lower is better)
Translates to: ALLARSCSIPSPSQDSSGAARSC*CLRKVT
Trigger: GGTGACCTTGCGCAAGCAGCAACAGCTTCTGGCTGC...CCCACTACTATCTTGGGAGGGAGAAGGGATGGAGCAGGAGCGGGCTAAGAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR GCA 90 bp GAACCTCTTGGGGCTGGTGGGCACCAAGGGTCAGAAGCAATTCTACCCAAAGATTCCAGCCACTGCAGCTaGCTCGGCTCGGAGCTCCCG +
Preference number: 4 (lower is better)
Translates to: EPLGAGGHQGSEAILPKDSSHCS*LGSELP
Trigger: CGGGAGCTCCGAGCCGAGGCAGCTGCAGTGGCTGGA...ATCTTTGGGTAGAATTGCTTCTGACCCTTGGTGCCCACCAGCCCCAAGAGGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR GCA 90 bp GCCCTCTTAGCCCGCTCCTGCTCCATCCCTTCTCCCTCCCAAGATAGTAGTGGGGGTGTGTGCCCAGGTTaGGGTGGATGCCAGAACACT +
Preference number: 4 (lower is better)
Translates to: ALLARSCSIPSPSQDSSGGVCPG*GGCQNT
Trigger: AGTGTTCTGGCATCCACCGCAACCTGGGCACACACC...CCCACTACTATCTTGGGAGGGAGAAGGGATGGAGCAGGAGCGGGCTAAGAGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CCA 90 bp ATGGCTGTGCCCAACCTGCACTGGCTGCTGACCCAACCCTACCCTGTCCAGCCCGGCGCAGTTCAGGAATaGAGCGGCTCAAAGTCCATT +
Preference number: 4 (lower is better)
Translates to: MAVPNLHWLLTQPYPVQPGAVQE*SGSKSI
Trigger: AATGGACTTTGAGCCGCTCCATTCCTGAACTGCGCC...GGGCTGGACAGGGTAGGGTTGGGTCAGCAGCCAGTGCAGGTTGGGCACAGCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR CCA 90 bp TCTGCCTGTCCCTGTCCAACCCCAGTACCCCATCTTGACCAAGGCCATGCCCTGCCCAGCCTGAGAACTTaGCATCAGGTGCCCCAGCTT +
Preference number: 4 (lower is better)
Translates to: SACPCPTPVPHLDQGHALPSLRT*HQVPQL
Trigger: AAGCTGGGGCACCTGATGCCAAGTTCTCAGGCTGGG...CAGGGCATGGCCTTGGTCAAGATGGGGTACTGGGGTTGGACAGGGACAGGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR CCA 90 bp GGTTTCCACTACTCACGGTCCCTTTCACGGAAAGGGTTGGGAACCCCCACCCCCCCCAGCCTGAGAACTTaGCATCAGGTGCCCCAGCTT +
Preference number: 4 (lower is better)
Translates to: GFHYSRSLSRKGLGTPTPPSLRT*HQVPQL
Trigger: AAGCTGGGGCACCTGATGCCAAGTTCTCAGGCTGGG...GGGGGTGGGGGTTCCCAACCCTTTCCGTGAAAGGGACCGTGAGTAGTGGAAACC
60% GC, longest homopolymer 8 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CCA 90 bp GTGCTGTGTCCTCAGTTCAGTGGCACACTTGCAGCTGAACCTCTTGGGGCTGGTGTGGATGCAGCTGAGTaGCTTGGGGAGCTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: VLCPQFSGTLAAEPLGAGVDAAE*LGELGR
Trigger: CCTGCCCAGCTCCCCAAGCCACTCAGCTGCATCCAC...ACCAGCCCCAAGAGGTTCAGCTGCAAGTGTGCCACTGAACTGAGGACACAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR CCA 90 bp CCTGGTTTCCACTACTCACGGTCCCTTTCACGGAAAGGGTTGGGAACCCCCACCCCCCCGTTACTAGCCTaGCCAGCTACCGGAGTGGAT +
Preference number: 4 (lower is better)
Translates to: PGFHYSRSLSRKGLGTPTPPLLA*PATGVD
Trigger: ATCCACTCCGGTAGCTGGCCAGGCTAGTAACGGGGG...GGTGGGGGTTCCCAACCCTTTCCGTGAAAGGGACCGTGAGTAGTGGAAACCAGG
60% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CCA 90 bp GCCCTCTTAGCCCGCTCCTGCTCCATCCCTTCTCCCTCCCAAGATAGTAGTGGGGCTCAGGTCTCCAGATaGGGTACAGTCCGTGCTGAG +
Preference number: 4 (lower is better)
Translates to: ALLARSCSIPSPSQDSSGAQVSR*GTVRAE
Trigger: CTCAGCACGGACTGTACCCCATCTGGAGACCTGAGC...CCCACTACTATCTTGGGAGGGAGAAGGGATGGAGCAGGAGCGGGCTAAGAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CCA 90 bp TTACAAGGCCCCCGCAGCCCTCTTAGCCCGCTCCTGCTCCATCCCTTCTCCCTCACGTCTGACCCGTGCTaGACACGATCAGGAACTCAA +
Preference number: 4 (lower is better)
Translates to: LQGPRSPLSPLLLHPFSLTSDPC*TRSGTQ
Trigger: TTGAGTTCCTGATCGTGTCCAGCACGGGTCAGACGT...GAGGGAGAAGGGATGGAGCAGGAGCGGGCTAAGAGGGCTGCGGGGGCCTTGTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CCA 90 bp CCCTGGCTGGGAGAGGTCACGGGGGTGAGGAATGGCTCTGGAGCTGCTCCAGTGCACAGCATTGCAGACTaGCTAGGATCTGACTCTCGA +
Preference number: 4 (lower is better)
Translates to: PWLGEVTGVRNGSGAAPVHSIAD*LGSDSR
Trigger: TCGAGAGTCAGATCCTAGCCAGTCTGCAATGCTGTG...CACTGGAGCAGCTCCAGAGCCATTCCTCACCCCCGTGACCTCTCCCAGCCAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CCA 90 bp GGGAACAAAGCAATAAATTACAAGGCCCCCGCAGCCCTCTTAGCCCGCTCCTGCTGGGGAGCGCAGCTGTaGGTCCTCTACGCTGGTGTC +
Preference number: 4 (lower is better)
Translates to: GNKAINYKAPAALLARSCWGAQL*VLYAGV
Trigger: GACACCAGCGTAGAGGACCCACAGCTGCGCTCCCCA...GCAGGAGCGGGCTAAGAGGGCTGCGGGGGCCTTGTAATTTATTGCTTTGTTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CCA 90 bp GTACTAAACCCTCCCTCTGGCGTGGCGTCGCCCCAGGAGCCAGCCTGGGTATGGAGCCTCCATGTGAACTaGATTCAGGTCTGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: VLNPPSGVASPQEPAWVWSLHVN*IQVWCC
Trigger: ACAGCACCAGACCTGAATCCAGTTCACATGGAGGCT...CCATACCCAGGCTGGCTCCTGGGGCGACGCCACGCCAGAGGGAGGGTTTAGTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR CCA 90 bp CCCAGATCACCACGGGCGCTGCACAGTCACAGGTACGCAGTCACGGTCACAGACCTTTGGCTCCACTCGTaGTCACGGTCTTGCAAGGCT +
Preference number: 4 (lower is better)
Translates to: PRSPRALHSHRYAVTVTDLWLHS*SRSCKA
Trigger: AGCCTTGCAAGACCGTGACCACGAGTGGAGCCAAAG...GTCTGTGACCGTGACTGCGTACCTGTGACTGTGCAGCGCCCGTGGTGATCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328568.9
CDS-3UTR TCA 90 bp CTGGTTTCCACTACTCACGGTCCCTTTCACGGAAAGGGTTGGGAACCCCCACCCGAGGGGAGGAAGCACTaGTCCTGTCTTGTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: LVSTTHGPFHGKGWEPPPEGRKH*SCLVSP
Trigger: TGGGGACACAAGACAGGATCAGTGCTTCCTCCCCTC...GGGTGGGGGTTCCCAACCCTTTCCGTGAAAGGGACCGTGAGTAGTGGAAACCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR TCA 90 bp GGTTTCCACTACTCACGGTCCCTTTCACGGAAAGGGTTGGGAACCCCCACCCCCGCTTGCCCGGGACTTTaGCTGTTGTTCGCAGCAAGT +
Preference number: 4 (lower is better)
Translates to: GFHYSRSLSRKGLGTPTPACPGL*LLFAAS
Trigger: ACTTGCTGCGAACAACAGTCAAAGTCCCGGGCAAGC...GGGGGTGGGGGTTCCCAACCCTTTCCGTGAAAGGGACCGTGAGTAGTGGAAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR GCA 90 bp CCCAGATCACCACGGGCGCTGCACAGTCACAGGTACGCAGTCACGGTCACAGACGAAGCTGTTGCTGCTTaGGCAAGGTCACCACCTTCT +
Preference number: 4 (lower is better)
Translates to: PRSPRALHSHRYAVTVTDEAVAA*ARSPPS
Trigger: AGAAGGTGGTGACCTTGCGCAAGCAGCAACAGCTTC...GTCTGTGACCGTGACTGCGTACCTGTGACTGTGCAGCGCCCGTGGTGATCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR GCA 90 bp GGGAACAAAGCAATAAATTACAAGGCCCCCGCAGCCCTCTTAGCCCGCTCCTGCCAAAAAGGCTGGTCCTaGGCTTGGCTGCCCGGTGCA +
Preference number: 4 (lower is better)
Translates to: GNKAINYKAPAALLARSCQKGWS*AWLPGA
Trigger: TGCACCGGGCAGCCAAGCGCAGGACCAGCCTTTTTG...GCAGGAGCGGGCTAAGAGGGCTGCGGGGGCCTTGTAATTTATTGCTTTGTTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR GCA 90 bp CAGCACCGGCTTCAGGCCGCTGTGGCCTTGGTGGTCCCTTTGATGGCACGGAGGCATCTTAAGAGTCAGTaGCTTCTCTGTTCCCAGGGT +
Preference number: 4 (lower is better)
Translates to: QHRLQAAVALVVPLMARRHLKSQ*LLCSQG
Trigger: ACCCTGGGAACAGAGAAGGCACTGACTCTTAAGATG...CCTCCGTGCCATCAAAGGGACCACCAAGGCCACAGCGGCCTGAAGCCGGTGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR GCA 90 bp ATGGCTGTGCCCAACCTGCACTGGCTGCTGACCCAACCCTACCCTGTCCAGCCCACGGAGGTGGATAAATaGCTGCATCAGCTGACACTG +
Preference number: 4 (lower is better)
Translates to: MAVPNLHWLLTQPYPVQPTEVDK*LHQLTL
Trigger: CAGTGTCAGCTGATGCAGGCATTTATCCACCTCCGT...GGGCTGGACAGGGTAGGGTTGGGTCAGCAGCCAGTGCAGGTTGGGCACAGCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR CCA 90 bp GCCCTCTTAGCCCGCTCCTGCTCCATCCCTTCTCCCTCCCAAGATAGTAGTGGGCTGTCCAATGAGGCCTaGATGCTGTCCTGGAGTTCG +
Preference number: 4 (lower is better)
Translates to: ALLARSCSIPSPSQDSSGLSNEA*MLSWSS
Trigger: CGAACTCCAGGACAGCATCCAGGCCTCATTGGACAG...CCCACTACTATCTTGGGAGGGAGAAGGGATGGAGCAGGAGCGGGCTAAGAGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR CCA 90 bp CTGGTTTCCACTACTCACGGTCCCTTTCACGGAAAGGGTTGGGAACCCCCACCCATGACTTCCCACTCCTaGCATCGCCCAGCACACCCA +
Preference number: 4 (lower is better)
Translates to: LVSTTHGPFHGKGWEPPPMTSHS*HRPAHP
Trigger: TGGGTGTGCTGGGCGATGCCAGGAGTGGGAAGTCAT...GGGTGGGGGTTCCCAACCCTTTCCGTGAAAGGGACCGTGAGTAGTGGAAACCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CCA 90 bp CCCAGATCACCACGGGCGCTGCACAGTCACAGGTACGCAGTCACGGTCACAGACCCAGTCAGGAATCGGTaGATGAGCGATGACTTCCCA +
Preference number: 4 (lower is better)
Translates to: PRSPRALHSHRYAVTVTDPVRNR*MSDDFP
Trigger: TGGGAAGTCATCGCTCATCCACCGATTCCTGACTGG...GTCTGTGACCGTGACTGCGTACCTGTGACTGTGCAGCGCCCGTGGTGATCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CCA 90 bp CCACCCATGGGTAGGTGTAGGGGACGTCCTGGTTTCCACTACTCACGGTCCCTTGGATGTCTGATCTGGTaGTGGCTGCAGGGAACTGGG +
Preference number: 4 (lower is better)
Translates to: PPMGRCRGRPGFHYSRSLGCLIW*WLQGTG
Trigger: CCCAGTTCCCTGCAGCCACCACCAGATCAGACATCC...AAGGGACCGTGAGTAGTGGAAACCAGGACGTCCCCTACACCTACCCATGGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CCA 90 bp GTATGGGCTCCCGCCCTGGGATTGTTGAGCTCGGGCAGGACCGGGTCTTCTTTCACGTCTGACCCGTGCTaGACACGATCAGGAACTCAA +
Preference number: 4 (lower is better)
Translates to: VWAPALGLLSSGRTGSSFTSDPC*TRSGTQ
Trigger: TTGAGTTCCTGATCGTGTCCAGCACGGGTCAGACGT...GAAAGAAGACCCGGTCCTGCCCGAGCTCAACAATCCCAGGGCGGGAGCCCATAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CCA 90 bp CTGGTTTCCACTACTCACGGTCCCTTTCACGGAAAGGGTTGGGAACCCCCACCCCCCGCTCCTCAAAACTaGCTGCCTCAAAGTGCCACG +
Preference number: 4 (lower is better)
Translates to: LVSTTHGPFHGKGWEPPPPAPQN*LPQSAT
Trigger: CGTGGCACTTTGAGGCAGCCAGTTTTGAGGAGCGGG...GGGTGGGGGTTCCCAACCCTTTCCGTGAAAGGGACCGTGAGTAGTGGAAACCAG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CCA 90 bp AACCCCGAGCGGGTAGACCCAGAGCAATCCGAGTGTGGAAACAATGGAGAGGGGGTAGGGTTTCCGTATTaGCCCCAAGTCCCGGGGCTA +
Preference number: 4 (lower is better)
Translates to: NPERVDPEQSECGNNGEGVGFPY*PQVPGL
Trigger: TAGCCCCGGGACTTGGGGCCAATACGGAAACCCTAC...CCCCTCTCCATTGTTTCCACACTCGGATTGCTCTGGGTCTACCCGCTCGGGGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CCA 90 bp GTGCTGTGTCCTCAGTTCAGTGGCACACTTGCAGCTGAACCTCTTGGGGCTGGTCTATCACCCAGTTTGTaGGGAAGGGGCAGGGGGCCT +
Preference number: 4 (lower is better)
Translates to: VLCPQFSGTLAAEPLGAGLSPSL*GRGRGP
Trigger: AGGCCCCCTGCCCCTTCCCCACAAACTGGGTGATAG...ACCAGCCCCAAGAGGTTCAGCTGCAAGTGTGCCACTGAACTGAGGACACAGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR TCA 90 bp GTGCTGTGTCCTCAGTTCAGTGGCACACTTGCAGCTGAACCTCTTGGGGCTGGTTCTCTGCCAGCTTCCTaGGGCGGTTTAGAGCCTGCT +
Preference number: 4 (lower is better)
Translates to: VLCPQFSGTLAAEPLGAGSLPAS*GGLEPA
Trigger: AGCAGGCTCTAAACCGCCTCAGGAAGCTGGCAGAGA...ACCAGCCCCAAGAGGTTCAGCTGCAAGTGTGCCACTGAACTGAGGACACAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR TCA 90 bp TGGCTATGTGCTGAGCCTAGTGGCACTGCAGCTCATGGAGGCAGCACCGGCTTCAGACCCGATCCACATTaGGCCCATAGGTTGCACAAG +
Preference number: 4 (lower is better)
Translates to: WLCAEPSGTAAHGGSTGFRPDPH*AHRLHK
Trigger: CTTGTGCAACCTATGGGCTCAATGTGGATCGGGTCT...GAAGCCGGTGCTGCCTCCATGAGCTGCAGTGCCACTAGGCTCAGCACATAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR TCA 90 bp CCTGGTTTCCACTACTCACGGTCCCTTTCACGGAAAGGGTTGGGAACCCCCACCGTGACCAACATTCGGTaGGGACGGGAGGGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: PGFHYSRSLSRKGLGTPTVTNIR*GREGRR
Trigger: TCTTCTTCCCTCCCGTCCTCACCGAATGTTGGTCAC...GGTGGGGGTTCCCAACCCTTTCCGTGAAAGGGACCGTGAGTAGTGGAAACCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR TCA 90 bp GTGCTGTGTCCTCAGTTCAGTGGCACACTTGCAGCTGAACCTCTTGGGGCTGGTAACACTCGATGCAGATaGGGGCGCCCAGGTTCAAGC +
Preference number: 4 (lower is better)
Translates to: VLCPQFSGTLAAEPLGAGNTRCR*GRPGSS
Trigger: GCTTGAACCTGGGCGCCCTCATCTGCATCGAGTGTT...ACCAGCCCCAAGAGGTTCAGCTGCAAGTGTGCCACTGAACTGAGGACACAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR TCA 90 bp GTATGGGCTCCCGCCCTGGGATTGTTGAGCTCGGGCAGGACCGGGTCTTCTTTCCAGAACTGTTGTACATaGTGGAACCACCTCCATGCC +
Preference number: 4 (lower is better)
Translates to: VWAPALGLLSSGRTGSSFQNCCT*WNHLHA
Trigger: GGCATGGAGGTGGTTCCATCATGTACAACAGTTCTG...GAAAGAAGACCCGGTCCTGCCCGAGCTCAACAATCCCAGGGCGGGAGCCCATAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR GCA 90 bp CTGGTTTCCACTACTCACGGTCCCTTTCACGGAAAGGGTTGGGAACCCCCACCCTCTGGGCATGCATGTTaGCCAGACCTGTCTTGCCAG +
Preference number: 4 (lower is better)
Translates to: LVSTTHGPFHGKGWEPPPSGHAC*PDLSCQ
Trigger: CTGGCAAGACAGGTCTGGGCAACATGCATGCCCAGA...GGGTGGGGGTTCCCAACCCTTTCCGTGAAAGGGACCGTGAGTAGTGGAAACCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR GCA 90 bp CCACCCATGGGTAGGTGTAGGGGACGTCCTGGTTTCCACTACTCACGGTCCCTTGAACTTGGCATCAGGTaGCCCAGCTTCCTCTCGGAT +
Preference number: 4 (lower is better)
Translates to: PPMGRCRGRPGFHYSRSLELGIR*PSFLSD
Trigger: ATCCGAGAGGAAGCTGGGGCACCTGATGCCAAGTTC...AAGGGACCGTGAGTAGTGGAAACCAGGACGTCCCCTACACCTACCCATGGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR GCA 90 bp GTATGGGCTCCCGCCCTGGGATTGTTGAGCTCGGGCAGGACCGGGTCTTCTTTCAAGTCTCATAGTAGCTaGAGCGTTTCATGTCCGCGC +
Preference number: 4 (lower is better)
Translates to: VWAPALGLLSSGRTGSSFKSHSS*SVSCPR
Trigger: GCGCGGACATGAAACGCTGCAGCTACTATGAGACTT...GAAAGAAGACCCGGTCCTGCCCGAGCTCAACAATCCCAGGGCGGGAGCCCATAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR GCA 90 bp TTTAGCTTCCACCCATGGGTAGGTGTAGGGGACGTCCTGGTTTCCACTACTCACGCAGGGACCCTGGGGTaGTCAATCCAGCCACTGCAG +
Preference number: 4 (lower is better)
Translates to: FSFHPWVGVGDVLVSTTHAGTLG*SIQPLQ
Trigger: CTGCAGTGGCTGGATTGAGCACCCCAGGGTCCCTGC...GTGAGTAGTGGAAACCAGGACGTCCCCTACACCTACCCATGGGTGGAAGCTAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR GCA 90 bp CTGGTTTCCACTACTCACGGTCCCTTTCACGGAAAGGGTTGGGAACCCCCACCCTTTTCCTCTTCAGCCTaGCCAGCCGAGCCTTCAGTC +
Preference number: 4 (lower is better)
Translates to: LVSTTHGPFHGKGWEPPPFSSSA*PAEPSV
Trigger: GACTGAAGGCTCGGCTGGGCAGGCTGAAGAGGAAAA...GGGTGGGGGTTCCCAACCCTTTCCGTGAAAGGGACCGTGAGTAGTGGAAACCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR GCA 90 bp GTATGGGCTCCCGCCCTGGGATTGTTGAGCTCGGGCAGGACCGGGTCTTCTTTCCCAAGGTCTTACTCTTaGCTTTCCGAGGGGACAACT +
Preference number: 4 (lower is better)
Translates to: VWAPALGLLSSGRTGSSFPRSYS*LSEGTT
Trigger: AGTTGTCCCCTCGGAAAGGCAAGAGTAAGACCTTGG...GAAAGAAGACCCGGTCCTGCCCGAGCTCAACAATCCCAGGGCGGGAGCCCATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328568.9
CDS-3UTR CCA 90 bp GCCCTCTTAGCCCGCTCCTGCTCCATCCCTTCTCCCTCCCAAGATAGTAGTGGGGGCCAAATTCCGGTCTaGCTTCAGCAGGTGTTTGGA +
Preference number: 4 (lower is better)
Translates to: ALLARSCSIPSPSQDSSGGQIPV*LQQVFG
Trigger: TCCAAACACCTGCTGAAGCCAGACCGGAATTTGGCC...CCCACTACTATCTTGGGAGGGAGAAGGGATGGAGCAGGAGCGGGCTAAGAGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CCA 90 bp CTCCAACCTGCCCACGTCCTCCACTACATGAACCCAGAACTGTTGTACATGATGTCCGGATCGCCTGGATaGCCACGGCCTCGCTTTGGC +
Preference number: 4 (lower is better)
Translates to: LQPAHVLHYMNPELLYMMSGSPG*PRPRFG
Trigger: GCCAAAGCGAGGCCGTGGCCATCCAGGCGATCCGGA...CATCATGTACAACAGTTCTGGGTTCATGTAGTGGAGGACGTGGGCAGGTTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR CCA 90 bp CTCCACTACATGAACCCAGAACTGTTGTACATGATGGAACCACCTCCATGCCCACCCGGGCAGCCGTGCTaGAGAAGGATGTCGGCGCAC +
Preference number: 4 (lower is better)
Translates to: LHYMNPELLYMMEPPPCPPGQPC*RRMSAH
Trigger: GTGCGCCGACATCCTTCTCCAGCACGGCTGCCCGGG...TGGGCATGGAGGTGGTTCCATCATGTACAACAGTTCTGGGTTCATGTAGTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR CCA 90 bp AACCCCGAGCGGGTAGACCCAGAGCAATCCGAGTGTGGAAACAATGGAGAGGGGGTCTCCATGCCTCGTTaGGGAGAGGGAGGTGAGTTT +
Preference number: 4 (lower is better)
Translates to: NPERVDPEQSECGNNGEGVSMPR*GEGGEF
Trigger: AAACTCACCTCCCTCTCCCCAACGAGGCATGGAGAC...CCCCTCTCCATTGTTTCCACACTCGGATTGCTCTGGGTCTACCCGCTCGGGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CCA 90 bp CCACCTTTCCTGGGTCACGCCGCTGTGCTGGGTGGTCACAGCCTAGGACCCTGTCTCTATGTTCTACTCTaGTACCTAGTGCTCACGGTG +
Preference number: 4 (lower is better)
Translates to: PPFLGHAAVLGGHSLGPCLYVLL*YLVLTV
Trigger: CACCGTGAGCACTAGGTACCAGAGTAGAACATAGAG...ACAGGGTCCTAGGCTGTGACCACCCAGCACAGCGGCGTGACCCAGGAAAGGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR TCA 90 bp CCACCCATGGGTAGGTGTAGGGGACGTCCTGGTTTCCACTACTCACGGTCCCTTAGACCCGATCCACATTaGGCCCATAGGTTGCACAAG +
Preference number: 4 (lower is better)
Translates to: PPMGRCRGRPGFHYSRSLRPDPH*AHRLHK
Trigger: CTTGTGCAACCTATGGGCTCAATGTGGATCGGGTCT...AAGGGACCGTGAGTAGTGGAAACCAGGACGTCCCCTACACCTACCCATGGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR TCA 90 bp CAGCCTCCAAGCCTTCACCCCATATTCATTTCCCACACTCATCCTATTTGGGTGCCCACTGACCCGTGCTaGGGGCTCGGGCCAAATTCC +
Preference number: 4 (lower is better)
Translates to: QPPSLHPIFISHTHPIWVPTDPC*GLGPNS
Trigger: GGAATTTGGCCCGAGCCCTCAGCACGGGTCAGTGGG...CACCCAAATAGGATGAGTGTGGGAAATGAATATGGGGTGAAGGCTTGGAGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549129.1
CDS-3UTR GCA 90 bp GTGCTGTGTCCTCAGTTCAGTGGCACACTTGCAGCTGAACCTCTTGGGGCTGGTTGCCCAGACCTGTCTTaGCAGGCTAACAACCACCTC +
Preference number: 4 (lower is better)
Translates to: VLCPQFSGTLAAEPLGAGCPDLS*QANNHL
Trigger: GAGGTGGTTGTTAGCCTGGCAAGACAGGTCTGGGCA...ACCAGCCCCAAGAGGTTCAGCTGCAAGTGTGCCACTGAACTGAGGACACAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR GCA 90 bp CCACCCATGGGTAGGTGTAGGGGACGTCCTGGTTTCCACTACTCACGGTCCCTTTCACAGCCTCTCGAATaGTGTCCAATGAGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: PPMGRCRGRPGFHYSRSLSQPLE*CPMRPG
Trigger: TCCAGGCCTCATTGGACAGCATTCGAGAGGCTGTGA...AAGGGACCGTGAGTAGTGGAAACCAGGACGTCCCCTACACCTACCCATGGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR GCA 90 bp CTGGTTTCCACTACTCACGGTCCCTTTCACGGAAAGGGTTGGGAACCCCCACCCGCAAGTCCATCTCCTTaGCGTGGGTACTGTGGATGT +
Preference number: 4 (lower is better)
Translates to: LVSTTHGPFHGKGWEPPPASPSP*RGYCGC
Trigger: ACATCCACAGTACCCACGGCAAGGAGATGGACTTGC...GGGTGGGGGTTCCCAACCCTTTCCGTGAAAGGGACCGTGAGTAGTGGAAACCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR GCA 90 bp TGGCTATGTGCTGAGCCTAGTGGCACTGCAGCTCATGGAGGCAGCACCGGCTTCTGGATTCAGGTCTGGTaGTGTGTCCTCAGTTCAGTG +
Preference number: 4 (lower is better)
Translates to: WLCAEPSGTAAHGGSTGFWIQVW*CVLSSV
Trigger: CACTGAACTGAGGACACAGCACCAGACCTGAATCCA...GAAGCCGGTGCTGCCTCCATGAGCTGCAGTGCCACTAGGCTCAGCACATAGCCA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR GCA 90 bp TTTAGCTTCCACCCATGGGTAGGTGTAGGGGACGTCCTGGTTTCCACTACTCACCCCCTCTTGTCGCTTTaGCCAGACCACACACCTGCC +
Preference number: 4 (lower is better)
Translates to: FSFHPWVGVGDVLVSTTHPLLSL*PDHTPA
Trigger: GGCAGGTGTGTGGTCTGGGCAAAGCGACAAGAGGGG...GTGAGTAGTGGAAACCAGGACGTCCCCTACACCTACCCATGGGTGGAAGCTAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR CCA 90 bp GGTTTCCACTACTCACGGTCCCTTTCACGGAAAGGGTTGGGAACCCCCACCCCCGTCTTCTCCAGCACCTaGTATGAGCCAGTCAGGAAT +
Preference number: 4 (lower is better)
Translates to: GFHYSRSLSRKGLGTPTPVFSST*YEPVRN
Trigger: ATTCCTGACTGGCTCATACCAGGTGCTGGAGAAGAC...GGGGGTGGGGGTTCCCAACCCTTTCCGTGAAAGGGACCGTGAGTAGTGGAAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CCA 90 bp GGGCATGTCCAAGCGCCTAGGAGCCCGTACCGCTGGGGACCTCCCCTTCCGCGAGTAGAAAGCCATTACTaGACAGGGTTACATATTTCT +
Preference number: 4 (lower is better)
Translates to: GHVQAPRSPYRWGPPLPRVESHY*TGLHIS
Trigger: AGAAATATGTAACCCTGTCCAGTAATGGCTTTCTAC...TCGCGGAAGGGGAGGTCCCCAGCGGTACGGGCTCCTAGGCGCTTGGACATGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CCA 90 bp AACCCCGAGCGGGTAGACCCAGAGCAATCCGAGTGTGGAAACAATGGAGAGGGGAGATTGAATTCCCCTTaGCGTTCCGGATCGCCTGGA +
Preference number: 4 (lower is better)
Translates to: NPERVDPEQSECGNNGEGRLNSP*RSGSPG
Trigger: TCCAGGCGATCCGGAACGCCAAGGGGAATTCAATCT...CCCCTCTCCATTGTTTCCACACTCGGATTGCTCTGGGTCTACCCGCTCGGGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CCA 90 bp ACCTGCCCACGTCCTCCACTACATGAACCCAGAACTGTTGTACATGATGGAACCTGGGGAGCGCAGCTGTaGGTCCTCTACGCTGGTGTC +
Preference number: 4 (lower is better)
Translates to: TCPRPPLHEPRTVVHDGTWGAQL*VLYAGV
Trigger: GACACCAGCGTAGAGGACCCACAGCTGCGCTCCCCA...GGTTCCATCATGTACAACAGTTCTGGGTTCATGTAGTGGAGGACGTGGGCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR CCA 90 bp GCAGTGGAGGGGCAGGTTTCAAAATCAGATCTGTCTCCAAAGTTCCTGCTCTTAAGGAGCCCGTACCGCTaGGGACCTCCCCTTCCGCGA +
Preference number: 4 (lower is better)
Translates to: AVEGQVSKSDLSPKFLLLRSPYR*GPPLPR
Trigger: TCGCGGAAGGGGAGGTCCCCAGCGGTACGGGCTCCT...TAAGAGCAGGAACTTTGGAGACAGATCTGATTTTGAAACCTGCCCCTCCACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR CCA 90 bp AACCCCGAGCGGGTAGACCCAGAGCAATCCGAGTGTGGAAACAATGGAGAGGGGTTTAGCTTCCACCCATaGGTAGGTGTAGGGGACGTC +
Preference number: 4 (lower is better)
Translates to: NPERVDPEQSECGNNGEGFSFHP*VGVGDV
Trigger: GACGTCCCCTACACCTACCCATGGGTGGAAGCTAAA...CCCCTCTCCATTGTTTCCACACTCGGATTGCTCTGGGTCTACCCGCTCGGGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CCA 90 bp GAACCTCTTGGGGCTGGTGGGCACCAAGGGTCAGAAGCAATTCTACCCAAAGATGGTGAGGAATGGCTCTaGAGCTGCTCCAGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: EPLGAGGHQGSEAILPKDGEEWL*SCSSGR
Trigger: CCTCCCACTGGAGCAGCTCCAGAGCCATTCCTCACC...ATCTTTGGGTAGAATTGCTTCTGACCCTTGGTGCCCACCAGCCCCAAGAGGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR CCA 90 bp TTTAGCTTCCACCCATGGGTAGGTGTAGGGGACGTCCTGGTTTCCACTACTCACCTATCACCCAGTTTGTaGGGAAGGGGCAGGGGGCCT +
Preference number: 4 (lower is better)
Translates to: FSFHPWVGVGDVLVSTTHLSPSL*GRGRGP
Trigger: AGGCCCCCTGCCCCTTCCCCACAAACTGGGTGATAG...GTGAGTAGTGGAAACCAGGACGTCCCCTACACCTACCCATGGGTGGAAGCTAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
3UTR CAA 72 bp GTCCTCAGTTCAGTGGCACACTTGCAGCTGAACCTCTaGGGGCTGGTGGGCACCAAGGGTCAGAAGCAATTC +
Preference number: 4 (lower is better)
Translates to: VLSSVAHLQLNL*GLVGTKGQKQF
Trigger: GAATTGCTTCTGACCCTTGGTGCCCACCAGCCCCAAGAGGTTCAGCTGCAAGTGTGCCACTGAACTGAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR TCA 90 bp TTTAGCTTCCACCCATGGGTAGGTGTAGGGGACGTCCTGGTTTCCACTACTCACGCAGTCCACGCAGATTaGATTCCCCTTGGCGTTCCG +
Preference number: 4 (lower is better)
Translates to: FSFHPWVGVGDVLVSTTHAVHAD*IPLGVP
Trigger: CGGAACGCCAAGGGGAATTCAATCTGCGTGGACTGC...GTGAGTAGTGGAAACCAGGACGTCCCCTACACCTACCCATGGGTGGAAGCTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR TCA 90 bp TTTAGCTTCCACCCATGGGTAGGTGTAGGGGACGTCCTGGTTTCCACTACTCACAACACTCGATGCAGATaGGGGCGCCCAGGTTCAAGC +
Preference number: 4 (lower is better)
Translates to: FSFHPWVGVGDVLVSTTHNTRCR*GRPGSS
Trigger: GCTTGAACCTGGGCGCCCTCATCTGCATCGAGTGTT...GTGAGTAGTGGAAACCAGGACGTCCCCTACACCTACCCATGGGTGGAAGCTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR TCA 90 bp GGTTTCCACTACTCACGGTCCCTTTCACGGAAAGGGTTGGGAACCCCCACCCCCACGTCCTCCACTACATaGACCCAGAACTGTTGTACA +
Preference number: 4 (lower is better)
Translates to: GFHYSRSLSRKGLGTPTPTSSTT*TQNCCT
Trigger: TGTACAACAGTTCTGGGTTCATGTAGTGGAGGACGT...GGGGGTGGGGGTTCCCAACCCTTTCCGTGAAAGGGACCGTGAGTAGTGGAAACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR GCA 90 bp GGGAACAAAGCAATAAATTACAAGGCCCCCGCAGCCCTCTTAGCCCGCTCCTGCGCAGCTACAACGAACTaGCTCTGGGCATGCATGTTG +
Preference number: 4 (lower is better)
Translates to: GNKAINYKAPAALLARSCAATTN*LWACML
Trigger: CAACATGCATGCCCAGAGGCAGTTCGTTGTAGCTGC...GCAGGAGCGGGCTAAGAGGGCTGCGGGGGCCTTGTAATTTATTGCTTTGTTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR GCA 90 bp CCTGGTTTCCACTACTCACGGTCCCTTTCACGGAAAGGGTTGGGAACCCCCACCGACTTCTGCTCTCACTaGAGCTACAACGAACTGCCT +
Preference number: 4 (lower is better)
Translates to: PGFHYSRSLSRKGLGTPTDFCSH*SYNELP
Trigger: AGGCAGTTCGTTGTAGCTGCAGTGAGAGCAGAAGTC...GGTGGGGGTTCCCAACCCTTTCCGTGAAAGGGACCGTGAGTAGTGGAAACCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR GCA 90 bp CTCCAACCTGCCCACGTCCTCCACTACATGAACCCAGAACTGTTGTACATGATGGTCGTCCACCCTCTCTaGCAGCTTCCTGAGGCGGTT +
Preference number: 4 (lower is better)
Translates to: LQPAHVLHYMNPELLYMMVVHPL*QLPEAV
Trigger: AACCGCCTCAGGAAGCTGGCAGAGAGGGTGGACGAC...CATCATGTACAACAGTTCTGGGTTCATGTAGTGGAGGACGTGGGCAGGTTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR GCA 90 bp GTATGGGCTCCCGCCCTGGGATTGTTGAGCTCGGGCAGGACCGGGTCTTCTTTCACCCAAAGATGCTGGTaGTACCAACTAACTCCTCAA +
Preference number: 4 (lower is better)
Translates to: VWAPALGLLSSGRTGSSFTQRCW*YQLTPQ
Trigger: TTGAGGAGTTAGTTGGTAGCACCAGCATCTTTGGGT...GAAAGAAGACCCGGTCCTGCCCGAGCTCAACAATCCCAGGGCGGGAGCCCATAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR GCA 90 bp GTATGGGCTCCCGCCCTGGGATTGTTGAGCTCGGGCAGGACCGGGTCTTCTTTCACTTGTCACTGCACCTaGACTGTTGAATCCACCTTT +
Preference number: 4 (lower is better)
Translates to: VWAPALGLLSSGRTGSSFTCHCT*TVESTF
Trigger: AAAGGTGGATTCAACAGTGCAGGTGCAGTGACAAGT...GAAAGAAGACCCGGTCCTGCCCGAGCTCAACAATCCCAGGGCGGGAGCCCATAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR GCA 90 bp CAGCACCGGCTTCAGGCCGCTGTGGCCTTGGTGGTCCCTTTGATGGCACGGAGGAAGGAACTTCCCACTTaGTCTTTGAAGGCAATTTCA +
Preference number: 4 (lower is better)
Translates to: QHRLQAAVALVVPLMARRKELPT*SLKAIS
Trigger: TGAAATTGCCTTCAAAGAGCAAGTGGGAAGTTCCTT...CCTCCGTGCCATCAAAGGGACCACCAAGGCCACAGCGGCCTGAAGCCGGTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR CCA 90 bp CCTGGTTTCCACTACTCACGGTCCCTTTCACGGAAAGGGTTGGGAACCCCCACCTTTGGATGTCTGATCTaGTGGTGGCTGCAGGGAACT +
Preference number: 4 (lower is better)
Translates to: PGFHYSRSLSRKGLGTPTFGCLI*WWLQGT
Trigger: AGTTCCCTGCAGCCACCACCAGATCAGACATCCAAA...GGTGGGGGTTCCCAACCCTTTCCGTGAAAGGGACCGTGAGTAGTGGAAACCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CCA 90 bp GGGAACAAAGCAATAAATTACAAGGCCCCCGCAGCCCTCTTAGCCCGCTCCTGCGGCCAAATTCCGGTCTaGCTTCAGCAGGTGTTTGGA +
Preference number: 4 (lower is better)
Translates to: GNKAINYKAPAALLARSCGQIPV*LQQVFG
Trigger: TCCAAACACCTGCTGAAGCCAGACCGGAATTTGGCC...GCAGGAGCGGGCTAAGAGGGCTGCGGGGGCCTTGTAATTTATTGCTTTGTTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CCA 90 bp AACCCCGAGCGGGTAGACCCAGAGCAATCCGAGTGTGGAAACAATGGAGAGGGGCACAGCATTGCAGACTaGCTAGGATCTGACTCTCGA +
Preference number: 4 (lower is better)
Translates to: NPERVDPEQSECGNNGEGHSIAD*LGSDSR
Trigger: TCGAGAGTCAGATCCTAGCCAGTCTGCAATGCTGTG...CCCCTCTCCATTGTTTCCACACTCGGATTGCTCTGGGTCTACCCGCTCGGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CCA 90 bp TTTAGCTTCCACCCATGGGTAGGTGTAGGGGACGTCCTGGTTTCCACTACTCACGTGCCCAGGTTGCGGTaGATGCCAGAACACTCGATG +
Preference number: 4 (lower is better)
Translates to: FSFHPWVGVGDVLVSTTHVPRLR*MPEHSM
Trigger: CATCGAGTGTTCTGGCATCCACCGCAACCTGGGCAC...GTGAGTAGTGGAAACCAGGACGTCCCCTACACCTACCCATGGGTGGAAGCTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CCA 90 bp GAACCTCTTGGGGCTGGTGGGCACCAAGGGTCAGAAGCAATTCTACCCAAAGATGGGTGTCTCTCCCGCTaGGCAACTATACCAGCGCAA +
Preference number: 4 (lower is better)
Translates to: EPLGAGGHQGSEAILPKDGCLSR*ATIPAQ
Trigger: TTGCGCTGGTATAGTTGCCCAGCGGGAGAGACACCC...ATCTTTGGGTAGAATTGCTTCTGACCCTTGGTGCCCACCAGCCCCAAGAGGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR CCA 90 bp GGGAACAAAGCAATAAATTACAAGGCCCCCGCAGCCCTCTTAGCCCGCTCCTGCTTTAGCTTCCACCCATaGGTAGGTGTAGGGGACGTC +
Preference number: 4 (lower is better)
Translates to: GNKAINYKAPAALLARSCFSFHP*VGVGDV
Trigger: GACGTCCCCTACACCTACCCATGGGTGGAAGCTAAA...GCAGGAGCGGGCTAAGAGGGCTGCGGGGGCCTTGTAATTTATTGCTTTGTTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CCA 90 bp TTACAAGGCCCCCGCAGCCCTCTTAGCCCGCTCCTGCTCCATCCCTTCTCCCTCCCCTCCCCAATTACCTaGTCCTTTGCAAACTATTTT +
Preference number: 4 (lower is better)
Translates to: LQGPRSPLSPLLLHPFSLPSPIT*SFANYF
Trigger: AAAATAGTTTGCAAAGGACCAGGTAATTGGGGAGGG...GAGGGAGAAGGGATGGAGCAGGAGCGGGCTAAGAGGGCTGCGGGGGCCTTGTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CCA 90 bp GTGCTGTGTCCTCAGTTCAGTGGCACACTTGCAGCTGAACCTCTTGGGGCTGGTACCTCTGCAGCTAGCTaGGAAATCTTTCCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: VLCPQFSGTLAAEPLGAGTSAAS*EIFPRR
Trigger: CCTCCTGGGAAAGATTTCCCAGCTAGCTGCAGAGGT...ACCAGCCCCAAGAGGTTCAGCTGCAAGTGTGCCACTGAACTGAGGACACAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR TCA 90 bp TTTAGCTTCCACCCATGGGTAGGTGTAGGGGACGTCCTGGTTTCCACTACTCACTCAGGAATCGGTGGATaGGCGATGACTTCCCACTCC +
Preference number: 4 (lower is better)
Translates to: FSFHPWVGVGDVLVSTTHSGIGG*AMTSHS
Trigger: GGAGTGGGAAGTCATCGCTCATCCACCGATTCCTGA...GTGAGTAGTGGAAACCAGGACGTCCCCTACACCTACCCATGGGTGGAAGCTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR TCA 90 bp ACCTGCCCACGTCCTCCACTACATGAACCCAGAACTGTTGTACATGATGGAACCCTCCAGCACCTGGTATaGGCCAGTCAGGAATCGGTG +
Preference number: 4 (lower is better)
Translates to: TCPRPPLHEPRTVVHDGTLQHLV*ASQESV
Trigger: CACCGATTCCTGACTGGCTCATACCAGGTGCTGGAG...GGTTCCATCATGTACAACAGTTCTGGGTTCATGTAGTGGAGGACGTGGGCAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR TCA 90 bp ACCTGCCCACGTCCTCCACTACATGAACCCAGAACTGTTGTACATGATGGAACCCCCGTTAATGCTGGCTaGGGGGCCAAAGGCAGAGAT +
Preference number: 4 (lower is better)
Translates to: TCPRPPLHEPRTVVHDGTPVNAG*GAKGRD
Trigger: ATCTCTGCCTTTGGCCCCTCAGCCAGCATTAACGGG...GGTTCCATCATGTACAACAGTTCTGGGTTCATGTAGTGGAGGACGTGGGCAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR TCA 90 bp GCCCTCTTAGCCCGCTCCTGCTCCATCCCTTCTCCCTCCCAAGATAGTAGTGGGACACTCCCAAACTTCTaGAGAAGGGAGCAAACTTTG +
Preference number: 4 (lower is better)
Translates to: ALLARSCSIPSPSQDSSGTLPNF*RREQTL
Trigger: CAAAGTTTGCTCCCTTCTTCAGAAGTTTGGGAGTGT...CCCACTACTATCTTGGGAGGGAGAAGGGATGGAGCAGGAGCGGGCTAAGAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR TCA 90 bp ATTCCAGCCTCCAAGCCTTCACCCCATATTCATTTCCCACACTCATCCTATTTGGAAGGTCATCCCCACTaGCCCGTGCTGAGGGCTCGG +
Preference number: 4 (lower is better)
Translates to: IPASKPSPHIHFPHSSYLEGHPH*PVLRAR
Trigger: CCGAGCCCTCAGCACGGGTCAGTGGGGATGACCTTC...CAAATAGGATGAGTGTGGGAAATGAATATGGGGTGAAGGCTTGGAGGCTGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549129.1
CDS-3UTR GCA 90 bp TTACAAGGCCCCCGCAGCCCTCTTAGCCCGCTCCTGCTCCATCCCTTCTCCCTCATTTCTTTCTTGTACTaGTCACTCTCTGTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: LQGPRSPLSPLLLHPFSLISFLY*SLSVFS
Trigger: GGAGAAGACAGAGAGTGAGCAGTACAAGAAAGAAAT...GAGGGAGAAGGGATGGAGCAGGAGCGGGCTAAGAGGGCTGCGGGGGCCTTGTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR GCA 90 bp GTACTAAACCCTCCCTCTGGCGTGGCGTCGCCCCAGGAGCCAGCCTGGGTATGGCTTTGTTCAAGGAATTaGCACTTCGTTTTAGTAGGA +
Preference number: 4 (lower is better)
Translates to: VLNPPSGVASPQEPAWVWLCSRN*HFVLVG
Trigger: TCCTACTAAAACGAAGTGGCAATTCCTTGAACAAAG...CCATACCCAGGCTGGCTCCTGGGGCGACGCCACGCCAGAGGGAGGGTTTAGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR GCA 90 bp CTCCACTACATGAACCCAGAACTGTTGTACATGATGGAACCACCTCCATGCCCACTCTTAGCCCGCTCCTaGTCCATCCCTTCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: LHYMNPELLYMMEPPPCPLLARS*SIPSPS
Trigger: GGAGGGAGAAGGGATGGAGCAGGAGCGGGCTAAGAG...TGGGCATGGAGGTGGTTCCATCATGTACAACAGTTCTGGGTTCATGTAGTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR GCA 90 bp CTCCACTACATGAACCCAGAACTGTTGTACATGATGGAACCACCTCCATGCCCAGGCCATGCCCTGACCTaGCTCCAAGAACAGACCAGC +
Preference number: 4 (lower is better)
Translates to: LHYMNPELLYMMEPPPCPGHALT*LQEQTS
Trigger: GCTGGTCTGTTCTTGGAGGCAGGTCAGGGCATGGCC...TGGGCATGGAGGTGGTTCCATCATGTACAACAGTTCTGGGTTCATGTAGTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR GCA 90 bp GCCCTCTTAGCCCGCTCCTGCTCCATCCCTTCTCCCTCCCAAGATAGTAGTGGGGTAAACACTTTCAGCTaGCCTCGAGAAATGGTAGGA +
Preference number: 4 (lower is better)
Translates to: ALLARSCSIPSPSQDSSGVNTFS*PREMVG
Trigger: TCCTACCATTTCTCGAGGGCAGCTGAAAGTGTTTAC...CCCACTACTATCTTGGGAGGGAGAAGGGATGGAGCAGGAGCGGGCTAAGAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR CCA 90 bp TTATTCCAGCCTCCAAGCCTTCACCCCATATTCATTTCCCACACTCATCCTATTGGCCAAAGGCAGAGATaGCCCTCGGGGGCCGCTTGC +
Preference number: 4 (lower is better)
Translates to: LFQPPSLHPIFISHTHPIGQRQR*PSGAAC
Trigger: GCAAGCGGCCCCCGAGGGCCATCTCTGCCTTTGGCC...AATAGGATGAGTGTGGGAAATGAATATGGGGTGAAGGCTTGGAGGCTGGAATAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000549129.1
CDS-3UTR CCA 90 bp TCCAGCCTCCAAGCCTTCACCCCATATTCATTTCCCACACTCATCCTATTTGGGGCTGGGGCTAGGGCTTaGCATGGGAGTAGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: SSLQAFTPYSFPTLILFGAGARA*HGSSGF
Trigger: GAAGCCACTACTCCCATGCCAAGCCCTAGCCCCAGC...CCCAAATAGGATGAGTGTGGGAAATGAATATGGGGTGAAGGCTTGGAGGCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000549129.1
CDS-3UTR CCA 90 bp GCAGTGGAGGGGCAGGTTTCAAAATCAGATCTGTCTCCAAAGTTCCTGCTCTTACAGGGTCAGCTCCCGTaGCCAGTCGTCCAAGTCCAG +
Preference number: 4 (lower is better)
Translates to: AVEGQVSKSDLSPKFLLLQGQLP*PVVQVQ
Trigger: CTGGACTTGGACGACTGGCCACGGGAGCTGACCCTG...TAAGAGCAGGAACTTTGGAGACAGATCTGATTTTGAAACCTGCCCCTCCACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR CCA 90 bp GTATGGGCTCCCGCCCTGGGATTGTTGAGCTCGGGCAGGACCGGGTCTTCTTTCCCCTCCCCAATTACCTaGTCCTTTGCAAACTATTTT +
Preference number: 4 (lower is better)
Translates to: VWAPALGLLSSGRTGSSFPSPIT*SFANYF
Trigger: AAAATAGTTTGCAAAGGACCAGGTAATTGGGGAGGG...GAAAGAAGACCCGGTCCTGCCCGAGCTCAACAATCCCAGGGCGGGAGCCCATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
3UTR CAA 72 bp CCTGCCCACGTCCTCCACTACATGAACCCAGAACTGTaGTACATGATGGAACCACCTCCATGCCCATGGGTA +
Preference number: 4 (lower is better)
Translates to: PAHVLHYMNPEL*YMMEPPPCPWV
Trigger: TACCCATGGGCATGGAGGTGGTTCCATCATGTACAACAGTTCTGGGTTCATGTAGTGGAGGACGTGGGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257897.7
3UTR CAA 72 bp GAGGTGGATAAATGCCTGCATCAGCTGACACTGAGTTaGTGGACACCAGGGACCTCTGCAGCTAGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: EVDKCLHQLTLS*WTPGTSAASWE
Trigger: TTCCCAGCTAGCTGCAGAGGTCCCTGGTGTCCACAAACTCAGTGTCAGCTGATGCAGGCATTTATCCACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR TCA 90 bp ACCTGCCCACGTCCTCCACTACATGAACCCAGAACTGTTGTACATGATGGAACCTCGAATGCTGTCCAATaGGGCCTGGATGCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: TCPRPPLHEPRTVVHDGTSNAVQ*GLDAVL
Trigger: CAGGACAGCATCCAGGCCTCATTGGACAGCATTCGA...GGTTCCATCATGTACAACAGTTCTGGGTTCATGTAGTGGAGGACGTGGGCAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR TCA 90 bp TCCAGCCTCCAAGCCTTCACCCCATATTCATTTCCCACACTCATCCTATTTGGGCCCGTTAATGCTGGCTaGGGGGCCAAAGGCAGAGAT +
Preference number: 4 (lower is better)
Translates to: SSLQAFTPYSFPTLILFGPVNAG*GAKGRD
Trigger: ATCTCTGCCTTTGGCCCCTCAGCCAGCATTAACGGG...CCCAAATAGGATGAGTGTGGGAAATGAATATGGGGTGAAGGCTTGGAGGCTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000549129.1
CDS-3UTR TCA 90 bp AACCCCGAGCGGGTAGACCCAGAGCAATCCGAGTGTGGAAACAATGGAGAGGGGCTTTCAGGTGCCCTCTaGACAGATACTGTTCAGAAT +
Preference number: 4 (lower is better)
Translates to: NPERVDPEQSECGNNGEGLSGAL*TDTVQN
Trigger: ATTCTGAACAGTATCTGTTCAGAGGGCACCTGAAAG...CCCCTCTCCATTGTTTCCACACTCGGATTGCTCTGGGTCTACCCGCTCGGGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR TCA 90 bp TGGCTATGTGCTGAGCCTAGTGGCACTGCAGCTCATGGAGGCAGCACCGGCTTCTTCCCACTTGCTCTTTaGAGGCAATTTCATTCTCTC +
Preference number: 4 (lower is better)
Translates to: WLCAEPSGTAAHGGSTGFFPLAL*RQFHSL
Trigger: GAGAGAATGAAATTGCCTTCAAAGAGCAAGTGGGAA...GAAGCCGGTGCTGCCTCCATGAGCTGCAGTGCCACTAGGCTCAGCACATAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR GCA 90 bp ACCTGCCCACGTCCTCCACTACATGAACCCAGAACTGTTGTACATGATGGAACCTTTTCCTCTTCAGCCTaGCCAGCCGAGCCTTCAGTC +
Preference number: 4 (lower is better)
Translates to: TCPRPPLHEPRTVVHDGTFSSSA*PAEPSV
Trigger: GACTGAAGGCTCGGCTGGGCAGGCTGAAGAGGAAAA...GGTTCCATCATGTACAACAGTTCTGGGTTCATGTAGTGGAGGACGTGGGCAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR CCA 90 bp TTACAAGGCCCCCGCAGCCCTCTTAGCCCGCTCCTGCTCCATCCCTTCTCCCTCGTAGAAAGCCATTACTaGACAGGGTTACATATTTCT +
Preference number: 4 (lower is better)
Translates to: LQGPRSPLSPLLLHPFSLVESHY*TGLHIS
Trigger: AGAAATATGTAACCCTGTCCAGTAATGGCTTTCTAC...GAGGGAGAAGGGATGGAGCAGGAGCGGGCTAAGAGGGCTGCGGGGGCCTTGTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CCA 90 bp CTCCACTACATGAACCCAGAACTGTTGTACATGATGGAACCACCTCCATGCCCACCCGCTCCTCAAAACTaGCTGCCTCAAAGTGCCACG +
Preference number: 4 (lower is better)
Translates to: LHYMNPELLYMMEPPPCPPAPQN*LPQSAT
Trigger: CGTGGCACTTTGAGGCAGCCAGTTTTGAGGAGCGGG...TGGGCATGGAGGTGGTTCCATCATGTACAACAGTTCTGGGTTCATGTAGTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR CCA 90 bp TTTAGCTTCCACCCATGGGTAGGTGTAGGGGACGTCCTGGTTTCCACTACTCACAGAGCAATCCGAGTGTaGAAACAATGGAGAGGGGGC +
Preference number: 4 (lower is better)
Translates to: FSFHPWVGVGDVLVSTTHRAIRV*KQWRGG
Trigger: GCCCCCTCTCCATTGTTTCCACACTCGGATTGCTCT...GTGAGTAGTGGAAACCAGGACGTCCCCTACACCTACCCATGGGTGGAAGCTAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR TCA 90 bp TTCCAGCCTCCAAGCCTTCACCCCATATTCATTTCCCACACTCATCCTATTTGGGTAGGAAGCTCTGTTTaGTGGGGATGGCTCGCCCAC +
Preference number: 4 (lower is better)
Translates to: FQPPSLHPIFISHTHPIWVGSSV*WGWLAH
Trigger: GTGGGCGAGCCATCCCCATCAAACAGAGCTTCCTAC...CCAAATAGGATGAGTGTGGGAAATGAATATGGGGTGAAGGCTTGGAGGCTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549129.1
CDS-3UTR TCA 90 bp GGTTTCCACTACTCACGGTCCCTTTCACGGAAAGGGTTGGGAACCCCCACCCCCCTCTTTAATTGCTGTTaGAGAAGATTCACACCACTG +
Preference number: 4 (lower is better)
Translates to: GFHYSRSLSRKGLGTPTPLFNCC*RRFTPL
Trigger: CAGTGGTGTGAATCTTCTTCAACAGCAATTAAAGAG...GGGGGTGGGGGTTCCCAACCCTTTCCGTGAAAGGGACCGTGAGTAGTGGAAACC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CCA 90 bp GTGCTGTGTCCTCAGTTCAGTGGCACACTTGCAGCTGAACCTCTTGGGGCTGGTCTCAAAGTCCATTCCTaGCTATTGATCACAGCCTCT +
Preference number: 4 (lower is better)
Translates to: VLCPQFSGTLAAEPLGAGLKVHS*LLITAS
Trigger: AGAGGCTGTGATCAATAGCCAGGAATGGACTTTGAG...ACCAGCCCCAAGAGGTTCAGCTGCAAGTGTGCCACTGAACTGAGGACACAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR CCA 90 bp CCACCCATGGGTAGGTGTAGGGGACGTCCTGGTTTCCACTACTCACGGTCCCTTCCGAGCCTTCAGTCTTaGATGGTGTTGTCAATTTTT +
Preference number: 4 (lower is better)
Translates to: PPMGRCRGRPGFHYSRSLPSLQS*MVLSIF
Trigger: AAAAATTGACAACACCATCCAAGACTGAAGGCTCGG...AAGGGACCGTGAGTAGTGGAAACCAGGACGTCCCCTACACCTACCCATGGGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR TCA 90 bp TTCCAGCCTCCAAGCCTTCACCCCATATTCATTTCCCACACTCATCCTATTTGGGCTTGCCCGGGACTTTaGCTGTTGTTCGCAGCAAGT +
Preference number: 4 (lower is better)
Translates to: FQPPSLHPIFISHTHPIWACPGL*LLFAAS
Trigger: ACTTGCTGCGAACAACAGTCAAAGTCCCGGGCAAGC...CCAAATAGGATGAGTGTGGGAAATGAATATGGGGTGAAGGCTTGGAGGCTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549129.1
CDS-3UTR TCA 90 bp CTGGTTTCCACTACTCACGGTCCCTTTCACGGAAAGGGTTGGGAACCCCCACCCCTCTTTAATTGCTGTTaGAGAAGATTCACACCACTG +
Preference number: 4 (lower is better)
Translates to: LVSTTHGPFHGKGWEPPPLFNCC*RRFTPL
Trigger: CAGTGGTGTGAATCTTCTTCAACAGCAATTAAAGAG...GGGTGGGGGTTCCCAACCCTTTCCGTGAAAGGGACCGTGAGTAGTGGAAACCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CCA 90 bp GTCAGAAGCAATTCTACCCAAAGATGCTGGTGCTACCAACTAACTCCTCAAGGTAAGGTCACCACCTTCTaGGCCACCTCCTGGAAGACC +
Preference number: 4 (lower is better)
Translates to: VRSNSTQRCWCYQLTPQGKVTTF*ATSWKT
Trigger: GGTCTTCCAGGAGGTGGCCCAGAAGGTGGTGACCTT...ACCTTGAGGAGTTAGTTGGTAGCACCAGCATCTTTGGGTAGAATTGCTTCTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR CCA 90 bp GTGCTGTGTCCTCAGTTCAGTGGCACACTTGCAGCTGAACCTCTTGGGGCTGGTCCGAGCCTTCAGTCTTaGATGGTGTTGTCAATTTTT +
Preference number: 4 (lower is better)
Translates to: VLCPQFSGTLAAEPLGAGPSLQS*MVLSIF
Trigger: AAAAATTGACAACACCATCCAAGACTGAAGGCTCGG...ACCAGCCCCAAGAGGTTCAGCTGCAAGTGTGCCACTGAACTGAGGACACAGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR CCA 90 bp CTCCACTACATGAACCCAGAACTGTTGTACATGATGGAACCACCTCCATGCCCAAGAGCAATCCGAGTGTaGAAACAATGGAGAGGGGGC +
Preference number: 4 (lower is better)
Translates to: LHYMNPELLYMMEPPPCPRAIRV*KQWRGG
Trigger: GCCCCCTCTCCATTGTTTCCACACTCGGATTGCTCT...TGGGCATGGAGGTGGTTCCATCATGTACAACAGTTCTGGGTTCATGTAGTGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR GCA 90 bp GCAGTGGAGGGGCAGGTTTCAAAATCAGATCTGTCTCCAAAGTTCCTGCTCTTAGAAGCTGTTGCTGCTTaGGCAAGGTCACCACCTTCT +
Preference number: 4 (lower is better)
Translates to: AVEGQVSKSDLSPKFLLLEAVAA*ARSPPS
Trigger: AGAAGGTGGTGACCTTGCGCAAGCAGCAACAGCTTC...TAAGAGCAGGAACTTTGGAGACAGATCTGATTTTGAAACCTGCCCCTCCACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR CCA 90 bp GCAGTGGAGGGGCAGGTTTCAAAATCAGATCTGTCTCCAAAGTTCCTGCTCTTAAGGCCTTCACCCATCTaGACAGTGCTCATGTCCTTG +
Preference number: 4 (lower is better)
Translates to: AVEGQVSKSDLSPKFLLLRPSPI*TVLMSL
Trigger: CAAGGACATGAGCACTGTCCAGATGGGTGAAGGCCT...TAAGAGCAGGAACTTTGGAGACAGATCTGATTTTGAAACCTGCCCCTCCACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR CCA 90 bp TTATTCCAGCCTCCAAGCCTTCACCCCATATTCATTTCCCACACTCATCCTATTGGATGTCTGATCTGGTaGTGGCTGCAGGGAACTGGG +
Preference number: 4 (lower is better)
Translates to: LFQPPSLHPIFISHTHPIGCLIW*WLQGTG
Trigger: CCCAGTTCCCTGCAGCCACCACCAGATCAGACATCC...AATAGGATGAGTGTGGGAAATGAATATGGGGTGAAGGCTTGGAGGCTGGAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549129.1
CDS-3UTR CCA 90 bp TCCAGCCTCCAAGCCTTCACCCCATATTCATTTCCCACACTCATCCTATTTGGGGCTTCAGCAGGTGTTTaGATGTCTGATCTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: SSLQAFTPYSFPTLILFGASAGV*MSDLVV
Trigger: CACCACCAGATCAGACATCCAAACACCTGCTGAAGC...CCCAAATAGGATGAGTGTGGGAAATGAATATGGGGTGAAGGCTTGGAGGCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549129.1
CDS-3UTR CCA 90 bp ACCTGCCCACGTCCTCCACTACATGAACCCAGAACTGTTGTACATGATGGAACCCAACTCTCCCAGGACTaGCATCATCTTAAGAGTCAG +
Preference number: 4 (lower is better)
Translates to: TCPRPPLHEPRTVVHDGTQLSQD*HHLKSQ
Trigger: CTGACTCTTAAGATGATGCCAGTCCTGGGAGAGTTG...GGTTCCATCATGTACAACAGTTCTGGGTTCATGTAGTGGAGGACGTGGGCAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR CCA 90 bp TTTAGCTTCCACCCATGGGTAGGTGTAGGGGACGTCCTGGTTTCCACTACTCACGTAGATAACAACATATaGCTGTGCCCAACCTGCACT +
Preference number: 4 (lower is better)
Translates to: FSFHPWVGVGDVLVSTTHVDNNI*LCPTCT
Trigger: AGTGCAGGTTGGGCACAGCCATATGTTGTTATCTAC...GTGAGTAGTGGAAACCAGGACGTCCCCTACACCTACCCATGGGTGGAAGCTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR CCA 90 bp TTCCAGCCTCCAAGCCTTCACCCCATATTCATTTCCCACACTCATCCTATTTGGTTTGGATGTCTGATCTaGTGGTGGCTGCAGGGAACT +
Preference number: 4 (lower is better)
Translates to: FQPPSLHPIFISHTHPIWFGCLI*WWLQGT
Trigger: AGTTCCCTGCAGCCACCACCAGATCAGACATCCAAA...CCAAATAGGATGAGTGTGGGAAATGAATATGGGGTGAAGGCTTGGAGGCTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549129.1
CDS-3UTR CCA 90 bp CTCCACTACATGAACCCAGAACTGTTGTACATGATGGAACCACCTCCATGCCCAAACTGGATTCAGGTCTaGTGCTGTGTCCTCAGTTCA +
Preference number: 4 (lower is better)
Translates to: LHYMNPELLYMMEPPPCPNWIQV*CCVLSS
Trigger: TGAACTGAGGACACAGCACCAGACCTGAATCCAGTT...TGGGCATGGAGGTGGTTCCATCATGTACAACAGTTCTGGGTTCATGTAGTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR GCA 90 bp TATTCCAGCCTCCAAGCCTTCACCCCATATTCATTTCCCACACTCATCCTATTTGCAAGTCCATCTCCTTaGCGTGGGTACTGTGGATGT +
Preference number: 4 (lower is better)
Translates to: YSSLQAFTPYSFPTLILFASPSP*RGYCGC
Trigger: ACATCCACAGTACCCACGGCAAGGAGATGGACTTGC...AAATAGGATGAGTGTGGGAAATGAATATGGGGTGAAGGCTTGGAGGCTGGAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549129.1
CDS-3UTR CCA 90 bp TATTCCAGCCTCCAAGCCTTCACCCCATATTCATTTCCCACACTCATCCTATTTAGGCCTTCACCCATCTaGACAGTGCTCATGTCCTTG +
Preference number: 4 (lower is better)
Translates to: YSSLQAFTPYSFPTLILFRPSPI*TVLMSL
Trigger: CAAGGACATGAGCACTGTCCAGATGGGTGAAGGCCT...AAATAGGATGAGTGTGGGAAATGAATATGGGGTGAAGGCTTGGAGGCTGGAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549129.1
CDS-3UTR CCA 90 bp TATTCCAGCCTCCAAGCCTTCACCCCATATTCATTTCCCACACTCATCCTATTTGGCCAAATTCCGGTCTaGCTTCAGCAGGTGTTTGGA +
Preference number: 4 (lower is better)
Translates to: YSSLQAFTPYSFPTLILFGQIPV*LQQVFG
Trigger: TCCAAACACCTGCTGAAGCCAGACCGGAATTTGGCC...AAATAGGATGAGTGTGGGAAATGAATATGGGGTGAAGGCTTGGAGGCTGGAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549129.1
CDS-3UTR CCA 90 bp TTATTCCAGCCTCCAAGCCTTCACCCCATATTCATTTCCCACACTCATCCTATTGTGGAAGACAGCAGATaGAAGGTCATCCCCACTGAC +
Preference number: 4 (lower is better)
Translates to: LFQPPSLHPIFISHTHPIVEDSR*KVIPTD
Trigger: GTCAGTGGGGATGACCTTCCATCTGCTGTCTTCCAC...AATAGGATGAGTGTGGGAAATGAATATGGGGTGAAGGCTTGGAGGCTGGAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549129.1
CDS-3UTR CCA 90 bp CCAGCCTCCAAGCCTTCACCCCATATTCATTTCCCACACTCATCCTATTTGGGTCACACTCATCCTATTTaGGTGTGGAAGACAGCAGAT +
Preference number: 4 (lower is better)
Translates to: PASKPSPHIHFPHSSYLGHTHPI*VWKTAD
Trigger: ATCTGCTGTCTTCCACACCCAAATAGGATGAGTGTG...ACCCAAATAGGATGAGTGTGGGAAATGAATATGGGGTGAAGGCTTGGAGGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549129.1
CDS-3UTR TCA 90 bp GTCAGAAGCAATTCTACCCAAAGATGCTGGTGCTACCAACTAACTCCTCAAGGTTTCACTGGCTGGAAATaGAAGGAACTTCCCACTTGC +
Preference number: 4 (lower is better)
Translates to: VRSNSTQRCWCYQLTPQGFTGWK*KELPTC
Trigger: GCAAGTGGGAAGTTCCTTTCATTTCCAGCCAGTGAA...ACCTTGAGGAGTTAGTTGGTAGCACCAGCATCTTTGGGTAGAATTGCTTCTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR GCA 90 bp ACCTGCCCACGTCCTCCACTACATGAACCCAGAACTGTTGTACATGATGGAACCAATTCTACCCAAAGATaGTGGTGCTACCAACTAACT +
Preference number: 4 (lower is better)
Translates to: TCPRPPLHEPRTVVHDGTNSTQR*WCYQLT
Trigger: AGTTAGTTGGTAGCACCAGCATCTTTGGGTAGAATT...GGTTCCATCATGTACAACAGTTCTGGGTTCATGTAGTGGAGGACGTGGGCAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR CCA 90 bp TATTCCAGCCTCCAAGCCTTCACCCCATATTCATTTCCCACACTCATCCTATTTCATCCTATTTGGGTGTaGAAGACAGCAGATGGAAGG +
Preference number: 4 (lower is better)
Translates to: YSSLQAFTPYSFPTLILFHPIWV*KTADGR
Trigger: CCTTCCATCTGCTGTCTTCCACACCCAAATAGGATG...AAATAGGATGAGTGTGGGAAATGAATATGGGGTGAAGGCTTGGAGGCTGGAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549129.1
CDS-3UTR CCA 90 bp CAGCCTCCAAGCCTTCACCCCATATTCATTTCCCACACTCATCCTATTTGGGTGGTAGAAAGCCATTACTaGACAGGGTTACATATTTCT +
Preference number: 4 (lower is better)
Translates to: QPPSLHPIFISHTHPIWVVESHY*TGLHIS
Trigger: AGAAATATGTAACCCTGTCCAGTAATGGCTTTCTAC...CACCCAAATAGGATGAGTGTGGGAAATGAATATGGGGTGAAGGCTTGGAGGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549129.1
CDS-3UTR GCA 90 bp TTCCAGCCTCCAAGCCTTCACCCCATATTCATTTCCCACACTCATCCTATTTGGCTTTGTTCAAGGAATTaGCACTTCGTTTTAGTAGGA +
Preference number: 4 (lower is better)
Translates to: FQPPSLHPIFISHTHPIWLCSRN*HFVLVG
Trigger: TCCTACTAAAACGAAGTGGCAATTCCTTGAACAAAG...CCAAATAGGATGAGTGTGGGAAATGAATATGGGGTGAAGGCTTGGAGGCTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549129.1
CDS-3UTR CAA 90 bp CCAGCGGTCCGCCCGGTGTGGTCGTGCCCGGCCCGCGTGGGGATGGGGGTGTCTGAGTCCCGCGAGGGCTaGGCACGGCCTCGCGTGTCG +
Preference number: 5 (lower is better)
Translates to: PAVRPVWSCPARVGMGVSESREG*ARPRVS
Trigger: CGACACGCGAGGCCGTGCCAAGCCCTCGCGGGACTC...AGACACCCCCATCCCCACGCGGGCCGGGCACGACCACACCGGGCGGACCGCTGG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS GCA 90 bp CGGCGCACAGCTGGCTTCCAGCCTGGCGGGCGTAGAACAGCGCCGTaGGGCCCTGGGCGTCACGGGCCGCCACGTCCGCGCCGTACCACA +
Preference number: 5 (lower is better)
Translates to: RRTAGFQPGGRRTAP*GPGRHGPPRPRRTT
Trigger: TGTGGTACGGCGCGGACGTGGCGGCCCGTGACGCCCAGGGCCGCACGGCGCTGTTCTACGCCCGCCAGGCTGGAAGCCAGCTGTGCGCCG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257897.7
ENST00000328568.9
ENST00000547588.6
CDS GCA 90 bp GACGTTCGTGCCGCTTCTTGCCCGGCTCCTCCGCGCCTCGGGGGCTaGCAGGATCCCCAGTCTCGGAGCCTCTGGCACCGGCGGCGCCGG +
Preference number: 5 (lower is better)
Translates to: DVRAASCPAPPRLGG*QDPQSRSLWHRRRR
Trigger: CCGGCGCCGCCGGTGCCAGAGGCTCCGAGACTGGGGATCCTGGCAGCCCCCGAGGCGCGGAGGAGCCGGGCAAGAAGCGGCACGAACGTC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547588.6
CDS-3UTR CAA 90 bp CGTCTGTCCAGCGGTCCGCCCGGTGTGGTCGTGCCCGGCCCGCGTGGGGATGGGAGGCTGGTCCTGCGCTaGGCTGCCCGGTGCAGGGAC +
Preference number: 5 (lower is better)
Translates to: RLSSGPPGVVVPGPRGDGRLVLR*AARCRD
Trigger: GTCCCTGCACCGGGCAGCCAAGCGCAGGACCAGCCT...CCCATCCCCACGCGGGCCGGGCACGACCACACCGGGCGGACCGCTGGACAGACG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS CCA 90 bp GTCCAGCGGTCCGCCCGGTGTGGTCGTGCCCGGCCCGCGTGGGGATaGGGGTGTCTCTCCCGCTGGGCAACTATACCAGCGCAACCGGGG +
Preference number: 5 (lower is better)
Translates to: VQRSARCGRARPAWG*GCLSRWATIPAQPG
Trigger: CCCCGGTTGCGCTGGTATAGTTGCCCAGCGGGAGAGACACCCCCATCCCCACGCGGGCCGGGCACGACCACACCGGGCGGACCGCTGGAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257897.7
ENST00000328568.9
ENST00000547588.6
CDS-3UTR CAA 90 bp CGTCTGTCCAGCGGTCCGCCCGGTGTGGTCGTGCCCGGCCCGCGTGGGGATGGGGGCCACGGCCTCGCTTaGGCTGTCTGTGCGCAGCTT +
Preference number: 5 (lower is better)
Translates to: RLSSGPPGVVVPGPRGDGGHGLA*AVCAQL
Trigger: AAGCTGCGCACAGACAGCCAAAGCGAGGCCGTGGCC...CCCATCCCCACGCGGGCCGGGCACGACCACACCGGGCGGACCGCTGGACAGACG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CAA 90 bp CAGCGGTCCGCCCGGTGTGGTCGTGCCCGGCCCGCGTGGGGATGGGGGTGTCTCCTCGTGGTCACGGTCTaGCAAGGCTTGGGAGCCGGC +
Preference number: 5 (lower is better)
Translates to: QRSARCGRARPAWGWGCLLVVTV*QGLGAG
Trigger: GCCGGCTCCCAAGCCTTGCAAGACCGTGACCACGAG...GAGACACCCCCATCCCCACGCGGGCCGGGCACGACCACACCGGGCGGACCGCTG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328568.9
CDS-3UTR CAA 90 bp GGGCATGTCCAAGCGCCTAGGAGCCCGTACCGCTGGGGACCTCCCCTTCCGCGACGGCTACCCGCGCCCTaGCCCCCGCCGGCTTTGGCT +
Preference number: 5 (lower is better)
Translates to: GHVQAPRSPYRWGPPLPRRLPAP*PPPALA
Trigger: AGCCAAAGCCGGCGGGGGCAAGGGCGCGGGTAGCCG...TCGCGGAAGGGGAGGTCCCCAGCGGTACGGGCTCCTAGGCGCTTGGACATGCCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328568.9
CDS-3UTR CAA 90 bp GTCTGTCCAGCGGTCCGCCCGGTGTGGTCGTGCCCGGCCCGCGTGGGGATGGGGCCCTTGACCCTGGGCTaGCCCTCGCTTTCGGGCCAT +
Preference number: 5 (lower is better)
Translates to: VCPAVRPVWSCPARVGMGPLTLG*PSLSGH
Trigger: ATGGCCCGAAAGCGAGGGCAAGCCCAGGGTCAAGGG...CCCCATCCCCACGCGGGCCGGGCACGACCACACCGGGCGGACCGCTGGACAGAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328568.9
CDS GCA 90 bp CGCGCATGGGCCAAAAGCAGGAGAACGGTAGCCACGTCCTGGGCCTaGACGGCGGCCCACAGCTGGCGGCCCAGCGGCTCCTCCGAGGTG +
Preference number: 5 (lower is better)
Translates to: RAWAKSRRTVATSWA*TAAHSWRPSGSSEV
Trigger: CACCTCGGAGGAGCCGCTGGGCCGCCAGCTGTGGGCCGCCGTGCAGGCCCAGGACGTGGCTACCGTTCTCCTGCTTTTGGCCCATGCGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257897.7
ENST00000328568.9
ENST00000547588.6
CDS CCA 90 bp CCGTGTCGCGCATGGGCCAAAAGCAGGAGAACGGTAGCCACGTCCTaGGCCTGCACGGCGGCCCACAGCTGGCGGCCCAGCGGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: PCRAWAKSRRTVATS*ACTAAHSWRPSGSS
Trigger: GGAGGAGCCGCTGGGCCGCCAGCTGTGGGCCGCCGTGCAGGCCCAGGACGTGGCTACCGTTCTCCTGCTTTTGGCCCATGCGCGACACGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257897.7
ENST00000328568.9
ENST00000547588.6
CDS CCA 90 bp CGGGCCATGACAGGCGGCTACCCGCGCCCTTGCCCCCGCCGGCTTTaGCTCCACTCGTGGTCACGGTCTTGCAAGGCTTGGGAGCCGGCG +
Preference number: 5 (lower is better)
Translates to: RAMTGGYPRPCPRRL*LHSWSRSCKAWEPA
Trigger: CGCCGGCTCCCAAGCCTTGCAAGACCGTGACCACGAGTGGAGCCAAAGCCGGCGGGGGCAAGGGCGCGGGTAGCCGCCTGTCATGGCCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328568.9
ENST00000547588.6
CDS-3UTR CAA 90 bp CGTCTGTCCAGCGGTCCGCCCGGTGTGGTCGTGCCCGGCCCGCGTGGGGATGGGGCCCAGCCTGAGAACTaGGCATCAGGTGCCCCAGCT +
Preference number: 5 (lower is better)
Translates to: RLSSGPPGVVVPGPRGDGAQPEN*ASGAPA
Trigger: AGCTGGGGCACCTGATGCCAAGTTCTCAGGCTGGGC...CCCATCCCCACGCGGGCCGGGCACGACCACACCGGGCGGACCGCTGGACAGACG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS GCA 90 bp GCGCCCCCGGTGCCCGCGCTGCTCGTGCTGATCCACAGCGCATCCTaGCGGTGGAAGAGACGTTCGTGCCGCTTCTTGCCCGGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: APPVPALLVLIHSAS*RWKRRSCRFLPGSS
Trigger: GGAGGAGCCGGGCAAGAAGCGGCACGAACGTCTCTTCCACCGGCAGGATGCGCTGTGGATCAGCACGAGCAGCGCGGGCACCGGGGGCGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547588.6
CDS-3UTR CAA 90 bp GTCTGTCCAGCGGTCCGCCCGGTGTGGTCGTGCCCGGCCCGCGTGGGGATGGGGGGCAGCCAGAAGCTGTaGCTGCTTGCGCAAGGTCAC +
Preference number: 5 (lower is better)
Translates to: VCPAVRPVWSCPARVGMGGSQKL*LLAQGH
Trigger: GTGACCTTGCGCAAGCAGCAACAGCTTCTGGCTGCC...CCCCATCCCCACGCGGGCCGGGCACGACCACACCGGGCGGACCGCTGGACAGAC
71% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CAA 90 bp GTCTGTCCAGCGGTCCGCCCGGTGTGGTCGTGCCCGGCCCGCGTGGGGATGGGGAGGTGTGTGCCCAGGTaGCGGTGGATGCCAGAACAC +
Preference number: 5 (lower is better)
Translates to: VCPAVRPVWSCPARVGMGRCVPR*RWMPEH
Trigger: GTGTTCTGGCATCCACCGCAACCTGGGCACACACCT...CCCCATCCCCACGCGGGCCGGGCACGACCACACCGGGCGGACCGCTGGACAGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS CCA 90 bp CCGGTGCCCGCGCTGCTCGTGCTGATCCACAGCGCATCCTGCCGGTaGAAGAGACGTTCGTGCCGCTTCTTGCCCGGCTCCTCCGCGCCT +
Preference number: 5 (lower is better)
Translates to: PVPALLVLIHSASCR*KRRSCRFLPGSSAP
Trigger: AGGCGCGGAGGAGCCGGGCAAGAAGCGGCACGAACGTCTCTTCCACCGGCAGGATGCGCTGTGGATCAGCACGAGCAGCGCGGGCACCGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547588.6
CDS-3UTR CAA 90 bp GCCCTCCCATGTACTAAACCCTCCCTCTGGCGTGGCGTCGCCCCAGGAGCCAGCAGGCTGGTCCTGCGCTaGGCTGCCCGGTGCAGGGAC +
Preference number: 5 (lower is better)
Translates to: ALPCTKPSLWRGVAPGASRLVLR*AARCRD
Trigger: GTCCCTGCACCGGGCAGCCAAGCGCAGGACCAGCCT...GCTGGCTCCTGGGGCGACGCCACGCCAGAGGGAGGGTTTAGTACATGGGAGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CAA 90 bp CAGCGGTCCGCCCGGTGTGGTCGTGCCCGGCCCGCGTGGGGATGGGGGTGTCTCCAGATTGAATTCCCCTaGGCGTTCCGGATCGCCTGG +
Preference number: 5 (lower is better)
Translates to: QRSARCGRARPAWGWGCLQIEFP*AFRIAW
Trigger: CCAGGCGATCCGGAACGCCAAGGGGAATTCAATCTG...GAGACACCCCCATCCCCACGCGGGCCGGGCACGACCACACCGGGCGGACCGCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CAA 90 bp CCAGCGGTCCGCCCGGTGTGGTCGTGCCCGGCCCGCGTGGGGATGGGGGTGTCTAGTAGCTGCTCGTACTaGGCGCGAATCCACGACTCG +
Preference number: 5 (lower is better)
Translates to: PAVRPVWSCPARVGMGVSSSCSY*ARIHDS
Trigger: CGAGTCGTGGATTCGCGCCAAGTACGAGCAGCTACT...AGACACCCCCATCCCCACGCGGGCCGGGCACGACCACACCGGGCGGACCGCTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CAA 90 bp GCCCTCCCATGTACTAAACCCTCCCTCTGGCGTGGCGTCGCCCCAGGAGCCAGCCCCGCCCTGGGATTGTaGAGCTCGGGCAGGACCGGG +
Preference number: 5 (lower is better)
Translates to: ALPCTKPSLWRGVAPGASPALGL*SSGRTG
Trigger: CCCGGTCCTGCCCGAGCTCAACAATCCCAGGGCGGG...GCTGGCTCCTGGGGCGACGCCACGCCAGAGGGAGGGTTTAGTACATGGGAGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS GCA 90 bp GCTTGCCCTCGCTTTCGGGCCATGACAGGCGGCTACCCGCGCCCTTaGCCCCGCCGGCTTTGGCTCCACTCGTGGTCACGGTCTTGCAAG +
Preference number: 5 (lower is better)
Translates to: ACPRFRAMTGGYPRP*PRRLWLHSWSRSCK
Trigger: CTTGCAAGACCGTGACCACGAGTGGAGCCAAAGCCGGCGGGGGCAAGGGCGCGGGTAGCCGCCTGTCATGGCCCGAAAGCGAGGGCAAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328568.9
ENST00000547588.6
CDS GCA 90 bp TCCACAGCGCATCCTGCCGGTGGAAGAGACGTTCGTGCCGCTTCTTaGCCGGCTCCTCCGCGCCTCGGGGGCTGCCAGGATCCCCAGTCT +
Preference number: 5 (lower is better)
Translates to: STAHPAGGRDVRAAS*PAPPRLGGCQDPQS
Trigger: AGACTGGGGATCCTGGCAGCCCCCGAGGCGCGGAGGAGCCGGGCAAGAAGCGGCACGAACGTCTCTTCCACCGGCAGGATGCGCTGTGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547588.6
CDS CCA 90 bp GAATCCACGACTCGCGCTCCTCCCGCGAAGAGTCCCGCGAGGGCTTaGCACGGCCTCGCGTGTCGCTTTCCCACACGCGGTTGGCCGTGT +
Preference number: 5 (lower is better)
Translates to: ESTTRAPPAKSPARA*HGLACRFPTRGWPC
Trigger: ACACGGCCAACCGCGTGTGGGAAAGCGACACGCGAGGCCGTGCCAAGCCCTCGCGGGACTCTTCGCGGGAGGAGCGCGAGTCGTGGATTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257897.7
ENST00000328568.9
ENST00000547588.6
CDS CCA 90 bp CGCAAAAAGGCTGGTCCTGCGCTTGGCTGCCCGGTGCAGGGACCCTaGGGTGCTCAATCCAGCCACTGCAGCTGCCTCGGCTCGGAGCTC +
Preference number: 5 (lower is better)
Translates to: RKKAGPALGCPVQGP*GAQSSHCSCLGSEL
Trigger: GAGCTCCGAGCCGAGGCAGCTGCAGTGGCTGGATTGAGCACCCCAGGGTCCCTGCACCGGGCAGCCAAGCGCAGGACCAGCCTTTTTGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000257897.7
ENST00000328568.9
ENST00000547588.6
CDS CCA 90 bp AGCAGCAGTTGCGTGATGACGACGTGGGCGAGCTCGGCCGCCAGGTaGAGTGGGGAGCGCAGCTGTGGGTCCTCTACGCTGGTGTCGAGC +
Preference number: 5 (lower is better)
Translates to: SSSCVMTTWASSAAR*SGERSCGSSTLVSS
Trigger: GCTCGACACCAGCGTAGAGGACCCACAGCTGCGCTCCCCACTCCACCTGGCGGCCGAGCTCGCCCACGTCGTCATCACGCAACTGCTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257897.7
ENST00000328568.9
ENST00000547588.6
CDS-3UTR CAA 90 bp CGTCTGTCCAGCGGTCCGCCCGGTGTGGTCGTGCCCGGCCCGCGTGGGGATGGGACAGTGCTCATGTCCTaGACGAGCCCGTTAATGCTG +
Preference number: 5 (lower is better)
Translates to: RLSSGPPGVVVPGPRGDGTVLMS*TSPLML
Trigger: CAGCATTAACGGGCTCGTCAAGGACATGAGCACTGT...CCCATCCCCACGCGGGCCGGGCACGACCACACCGGGCGGACCGCTGGACAGACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CAA 90 bp GCTCGGGCAGGACCGGGTCTTCTTTCCGCCCCTAGGGGGCACAAGCGGGCATGTGGCCACGGCCTCGCTTaGGCTGTCTGTGCGCAGCTT +
Preference number: 5 (lower is better)
Translates to: ARAGPGLLSAPRGHKRACGHGLA*AVCAQL
Trigger: AAGCTGCGCACAGACAGCCAAAGCGAGGCCGTGGCC...ACATGCCCGCTTGTGCCCCCTAGGGGCGGAAAGAAGACCCGGTCCTGCCCGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS TCA 90 bp CGGCAGAGACCGAAGCTCCAGTCCCGGCGCTGCTCTTTGACCCCTTaGCCCTGGGCTTGCCCTCGCTTTCGGGCCATGACAGGCGGCTAC +
Preference number: 5 (lower is better)
Translates to: RQRPKLQSRRCSLTP*PWACPRFRAMTGGY
Trigger: GTAGCCGCCTGTCATGGCCCGAAAGCGAGGGCAAGCCCAGGGTCAAGGGGTCAAAGAGCAGCGCCGGGACTGGAGCTTCGGTCTCTGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328568.9
ENST00000547588.6
CDS CCA 90 bp AGCTGTGGGTCCTCTACGCTGGTGTCGAGCGGCCCGTGTCGCGCATaGGCCAAAAGCAGGAGAACGGTAGCCACGTCCTGGGCCTGCACG +
Preference number: 5 (lower is better)
Translates to: SCGSSTLVSSGPCRA*AKSRRTVATSWACT
Trigger: CGTGCAGGCCCAGGACGTGGCTACCGTTCTCCTGCTTTTGGCCCATGCGCGACACGGGCCGCTCGACACCAGCGTAGAGGACCCACAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257897.7
ENST00000328568.9
ENST00000547588.6
CDS-3UTR CAA 90 bp GCTCGGGCAGGACCGGGTCTTCTTTCCGCCCCTAGGGGGCACAAGCGGGCATGTGGTAGGGTTTCCGTATaGGCCCCAAGTCCCGGGGCT +
Preference number: 5 (lower is better)
Translates to: ARAGPGLLSAPRGHKRACGRVSV*APSPGA
Trigger: AGCCCCGGGACTTGGGGCCAATACGGAAACCCTACC...ACATGCCCGCTTGTGCCCCCTAGGGGCGGAAAGAAGACCCGGTCCTGCCCGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CAA 90 bp GGGCATGTCCAAGCGCCTAGGAGCCCGTACCGCTGGGGACCTCCCCTTCCGCGACTTTCACGGAAAGGGTaGGGAACCCCCACCCCCATG +
Preference number: 5 (lower is better)
Translates to: GHVQAPRSPYRWGPPLPRLSRKG*GTPTPM
Trigger: CATGGGGGTGGGGGTTCCCAACCCTTTCCGTGAAAG...TCGCGGAAGGGGAGGTCCCCAGCGGTACGGGCTCCTAGGCGCTTGGACATGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CAA 90 bp GTACTAAACCCTCCCTCTGGCGTGGCGTCGCCCCAGGAGCCAGCCTGGGTATGGGCCCTATCACCCAGTTaGTGGGGAAGGGGCAGGGGG +
Preference number: 5 (lower is better)
Translates to: VLNPPSGVASPQEPAWVWALSPS*WGRGRG
Trigger: CCCCCTGCCCCTTCCCCACAAACTGGGTGATAGGGC...CCATACCCAGGCTGGCTCCTGGGGCGACGCCACGCCAGAGGGAGGGTTTAGTAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CAA 90 bp GCTCGGGCAGGACCGGGTCTTCTTTCCGCCCCTAGGGGGCACAAGCGGGCATGTCAGGCCGCTGTGGCCTaGGTGGTCCCTTTGATGGCA +
Preference number: 5 (lower is better)
Translates to: ARAGPGLLSAPRGHKRACQAAVA*VVPLMA
Trigger: TGCCATCAAAGGGACCACCAAGGCCACAGCGGCCTG...ACATGCCCGCTTGTGCCCCCTAGGGGCGGAAAGAAGACCCGGTCCTGCCCGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR CAA 90 bp GCTCCCGCCCTGGGATTGTTGAGCTCGGGCAGGACCGGGTCTTCTTTCCGCCCCGGCAGCCAGAAGCTGTaGCTGCTTGCGCAAGGTCAC +
Preference number: 5 (lower is better)
Translates to: APALGLLSSGRTGSSFRPGSQKL*LLAQGH
Trigger: GTGACCTTGCGCAAGCAGCAACAGCTTCTGGCTGCC...GGGGCGGAAAGAAGACCCGGTCCTGCCCGAGCTCAACAATCCCAGGGCGGGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CAA 90 bp GCTCCCGCCCTGGGATTGTTGAGCTCGGGCAGGACCGGGTCTTCTTTCCGCCCCCTCGCCCACTCCCTGTaGTCTCTCCCCGACTATCCA +
Preference number: 5 (lower is better)
Translates to: APALGLLSSGRTGSSFRPLAHSL*SLPDYP
Trigger: TGGATAGTCGGGGAGAGACAACAGGGAGTGGGCGAG...GGGGCGGAAAGAAGACCCGGTCCTGCCCGAGCTCAACAATCCCAGGGCGGGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CAA 90 bp CCAGCGGTCCGCCCGGTGTGGTCGTGCCCGGCCCGCGTGGGGATGGGGGTGTCTGGATGCAAGTCACTGTaGTCCAAGGTCTTACTCTTG +
Preference number: 5 (lower is better)
Translates to: PAVRPVWSCPARVGMGVSGCKSL*SKVLLL
Trigger: CAAGAGTAAGACCTTGGACAACAGTGACTTGCATCC...AGACACCCCCATCCCCACGCGGGCCGGGCACGACCACACCGGGCGGACCGCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328568.9
CDS TCA 90 bp CATCTGGACAGTGCTCATGTCCTTGACGAGCCCGTTAATGCTGGCTaGGGGGCCAAAGGCAGAGATGGCCCTCGGGGGCCGCTTGCCCGG +
Preference number: 5 (lower is better)
Translates to: HLDSAHVLDEPVNAG*GAKGRDGPRGPLAR
Trigger: CCGGGCAAGCGGCCCCCGAGGGCCATCTCTGCCTTTGGCCCCTCAGCCAGCATTAACGGGCTCGTCAAGGACATGAGCACTGTCCAGATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000257897.7
ENST00000328568.9
ENST00000547588.6
ENST00000549129.1
CDS-3UTR CAA 90 bp GGTTTCCACTACTCACGGTCCCTTTCACGGAAAGGGTTGGGAACCCCCACCCCCGCCCTCGGGGGCCGCTaGCCCGGGACTTTGACTGTT +
Preference number: 5 (lower is better)
Translates to: GFHYSRSLSRKGLGTPTPALGGR*PGTLTV
Trigger: AACAGTCAAAGTCCCGGGCAAGCGGCCCCCGAGGGC...GGGGGTGGGGGTTCCCAACCCTTTCCGTGAAAGGGACCGTGAGTAGTGGAAACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CAA 90 bp GTGCTGTGTCCTCAGTTCAGTGGCACACTTGCAGCTGAACCTCTTGGGGCTGGTGAGTCCCGCGAGGGCTaGGCACGGCCTCGCGTGTCG +
Preference number: 5 (lower is better)
Translates to: VLCPQFSGTLAAEPLGAGESREG*ARPRVS
Trigger: CGACACGCGAGGCCGTGCCAAGCCCTCGCGGGACTC...ACCAGCCCCAAGAGGTTCAGCTGCAAGTGTGCCACTGAACTGAGGACACAGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR CAA 90 bp TTACAAGGCCCCCGCAGCCCTCTTAGCCCGCTCCTGCTCCATCCCTTCTCCCTCGGTAGGGTTTCCGTATaGGCCCCAAGTCCCGGGGCT +
Preference number: 5 (lower is better)
Translates to: LQGPRSPLSPLLLHPFSLGRVSV*APSPGA
Trigger: AGCCCCGGGACTTGGGGCCAATACGGAAACCCTACC...GAGGGAGAAGGGATGGAGCAGGAGCGGGCTAAGAGGGCTGCGGGGGCCTTGTAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS TCA 90 bp CACTGCAGCTGCCTCGGCTCGGAGCTCCCGGTGACCAACATTCGGTaGGGACGGGAGGGAAGAAGAGTAGTCGCTAGTGTGGCCCCCGTT +
Preference number: 5 (lower is better)
Translates to: HCSCLGSELPVTNIR*GREGRRVVASVAPV
Trigger: AACGGGGGCCACACTAGCGACTACTCTTCTTCCCTCCCGTCCTCACCGAATGTTGGTCACCGGGAGCTCCGAGCCGAGGCAGCTGCAGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000257897.7
ENST00000328568.9
ENST00000547588.6
CDS-3UTR CAA 90 bp GCCCTCCCATGTACTAAACCCTCCCTCTGGCGTGGCGTCGCCCCAGGAGCCAGCAGTAGGAAGCTCTGTTaGATGGGGATGGCTCGCCCA +
Preference number: 5 (lower is better)
Translates to: ALPCTKPSLWRGVAPGASSRKLC*MGMARP
Trigger: TGGGCGAGCCATCCCCATCAAACAGAGCTTCCTACT...GCTGGCTCCTGGGGCGACGCCACGCCAGAGGGAGGGTTTAGTACATGGGAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CAA 90 bp GCCCTCCCATGTACTAAACCCTCCCTCTGGCGTGGCGTCGCCCCAGGAGCCAGCAGCAAGTCCATCTCCTaGCCGTGGGTACTGTGGATG +
Preference number: 5 (lower is better)
Translates to: ALPCTKPSLWRGVAPGASSKSIS*PWVLWM
Trigger: CATCCACAGTACCCACGGCAAGGAGATGGACTTGCT...GCTGGCTCCTGGGGCGACGCCACGCCAGAGGGAGGGTTTAGTACATGGGAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CAA 90 bp GTGCTGAGCCTAGTGGCACTGCAGCTCATGGAGGCAGCACCGGCTTCAGGCCGCCGCTTGCCCGGGACTTaGACTGTTGTTCGCAGCAAG +
Preference number: 5 (lower is better)
Translates to: VLSLVALQLMEAAPASGRRLPGT*TVVRSK
Trigger: CTTGCTGCGAACAACAGTCAAAGTCCCGGGCAAGCG...GCGGCCTGAAGCCGGTGCTGCCTCCATGAGCTGCAGTGCCACTAGGCTCAGCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR CAA 90 bp CAGCACCGGCTTCAGGCCGCTGTGGCCTTGGTGGTCCCTTTGATGGCACGGAGGCGCAGTCCACGCAGATaGAATTCCCCTTGGCGTTCC +
Preference number: 5 (lower is better)
Translates to: QHRLQAAVALVVPLMARRRSPRR*NSPWRS
Trigger: GGAACGCCAAGGGGAATTCAATCTGCGTGGACTGCG...CCTCCGTGCCATCAAAGGGACCACCAAGGCCACAGCGGCCTGAAGCCGGTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR CAA 90 bp CCACCTTTCCTGGGTCACGCCGCTGTGCTGGGTGGTCACAGCCTAGGACCCTGTAGGTGTGTGCCCAGGTaGCGGTGGATGCCAGAACAC +
Preference number: 5 (lower is better)
Translates to: PPFLGHAAVLGGHSLGPCRCVPR*RWMPEH
Trigger: GTGTTCTGGCATCCACCGCAACCTGGGCACACACCT...ACAGGGTCCTAGGCTGTGACCACCCAGCACAGCGGCGTGACCCAGGAAAGGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR CAA 90 bp CCACCTTTCCTGGGTCACGCCGCTGTGCTGGGTGGTCACAGCCTAGGACCCTGTCTTTCACGGAAAGGGTaGGGAACCCCCACCCCCATG +
Preference number: 5 (lower is better)
Translates to: PPFLGHAAVLGGHSLGPCLSRKG*GTPTPM
Trigger: CATGGGGGTGGGGGTTCCCAACCCTTTCCGTGAAAG...ACAGGGTCCTAGGCTGTGACCACCCAGCACAGCGGCGTGACCCAGGAAAGGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR CAA 90 bp AACCCCGAGCGGGTAGACCCAGAGCAATCCGAGTGTGGAAACAATGGAGAGGGGTTGCCCCCGCCGGCTTaGGCTCCACTCGTGGTCACG +
Preference number: 5 (lower is better)
Translates to: NPERVDPEQSECGNNGEGLPPPA*APLVVT
Trigger: CGTGACCACGAGTGGAGCCAAAGCCGGCGGGGGCAA...CCCCTCTCCATTGTTTCCACACTCGGATTGCTCTGGGTCTACCCGCTCGGGGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328568.9
CDS GCA 90 bp CAGGCGGTCCCGGATGCAAGTCACTGTTGTCCAAGGTCTTACTCTTaGCTTTCCGAGGGGACAACTTCCCTCGGGCTCCAGCCCCAGCCC +
Preference number: 5 (lower is better)
Translates to: QAVPDASHCCPRSYS*LSEGTTSLGLQPQP
Trigger: GGGCTGGGGCTGGAGCCCGAGGGAAGTTGTCCCCTCGGAAAGGCAAGAGTAAGACCTTGGACAACAGTGACTTGCATCCGGGACCGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328568.9
ENST00000547588.6
CDS-3UTR CAA 90 bp TGTGCTGAGCCTAGTGGCACTGCAGCTCATGGAGGCAGCACCGGCTTCAGGCCGCGGTTTAGAGCCTGCTaGGCCACCTCATGTCGTCTG +
Preference number: 5 (lower is better)
Translates to: CAEPSGTAAHGGSTGFRPRFRAC*ATSCRL
Trigger: CAGACGACATGAGGTGGCCAAGCAGGCTCTAAACCG...CGGCCTGAAGCCGGTGCTGCCTCCATGAGCTGCAGTGCCACTAGGCTCAGCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR CAA 90 bp CCCTGGCTGGGAGAGGTCACGGGGGTGAGGAATGGCTCTGGAGCTGCTCCAGTGAGCACTGATCCTGTCTaGTGTCCCCACCAGTGCCAA +
Preference number: 5 (lower is better)
Translates to: PWLGEVTGVRNGSGAAPVSTDPV*CPHQCQ
Trigger: TTGGCACTGGTGGGGACACAAGACAGGATCAGTGCT...CACTGGAGCAGCTCCAGAGCCATTCCTCACCCCCGTGACCTCTCCCAGCCAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CAA 90 bp GTACTAAACCCTCCCTCTGGCGTGGCGTCGCCCCAGGAGCCAGCCTGGGTATGGAGAAGCTGTTGCTGCTaGCGCAAGGTCACCACCTTC +
Preference number: 5 (lower is better)
Translates to: VLNPPSGVASPQEPAWVWRSCCC*RKVTTF
Trigger: GAAGGTGGTGACCTTGCGCAAGCAGCAACAGCTTCT...CCATACCCAGGCTGGCTCCTGGGGCGACGCCACGCCAGAGGGAGGGTTTAGTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CAA 90 bp GGGAACAAAGCAATAAATTACAAGGCCCCCGCAGCCCTCTTAGCCCGCTCCTGCGCTCCCGCCCTGGGATaGTTGAGCTCGGGCAGGACC +
Preference number: 5 (lower is better)
Translates to: GNKAINYKAPAALLARSCAPALG*LSSGRT
Trigger: GGTCCTGCCCGAGCTCAACAATCCCAGGGCGGGAGC...GCAGGAGCGGGCTAAGAGGGCTGCGGGGGCCTTGTAATTTATTGCTTTGTTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CAA 90 bp AACCCCGAGCGGGTAGACCCAGAGCAATCCGAGTGTGGAAACAATGGAGAGGGGGCCCTATCACCCAGTTaGTGGGGAAGGGGCAGGGGG +
Preference number: 5 (lower is better)
Translates to: NPERVDPEQSECGNNGEGALSPS*WGRGRG
Trigger: CCCCCTGCCCCTTCCCCACAAACTGGGTGATAGGGC...CCCCTCTCCATTGTTTCCACACTCGGATTGCTCTGGGTCTACCCGCTCGGGGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CAA 90 bp GTCTGTCCAGCGGTCCGCCCGGTGTGGTCGTGCCCGGCCCGCGTGGGGATGGGGCAATTACCTGGTCCTTaGCAAACTATTTTAGCCAGA +
Preference number: 5 (lower is better)
Translates to: VCPAVRPVWSCPARVGMGQLPGP*QTILAR
Trigger: TCTGGCTAAAATAGTTTGCAAAGGACCAGGTAATTG...CCCCATCCCCACGCGGGCCGGGCACGACCACACCGGGCGGACCGCTGGACAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CAA 90 bp TCTGCCTGTCCCTGTCCAACCCCAGTACCCCATCTTGACCAAGGCCATGCCCTGCCCCCTCTTGTCGCTTaGCCCAGACCACACACCTGC +
Preference number: 5 (lower is better)
Translates to: SACPCPTPVPHLDQGHALPPLVA*PRPHTC
Trigger: GCAGGTGTGTGGTCTGGGCAAAGCGACAAGAGGGGG...CAGGGCATGGCCTTGGTCAAGATGGGGTACTGGGGTTGGACAGGGACAGGCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR CAA 90 bp GCCCTCCCATGTACTAAACCCTCCCTCTGGCGTGGCGTCGCCCCAGGAGCCAGCTCCAAGGTCTTACTCTaGCCTTTCCGAGGGGACAAC +
Preference number: 5 (lower is better)
Translates to: ALPCTKPSLWRGVAPGASSKVLL*PFRGDN
Trigger: GTTGTCCCCTCGGAAAGGCAAGAGTAAGACCTTGGA...GCTGGCTCCTGGGGCGACGCCACGCCAGAGGGAGGGTTTAGTACATGGGAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328568.9
CDS CCA 90 bp ATCACAGCCTCTCGAATGCTGTCCAATGAGGCCTGGATGCTGTCCTaGAGTTCGGGGTCGTCCACCCTCTCTGCCAGCTTCCTGAGGCGG +
Preference number: 5 (lower is better)
Translates to: ITASRMLSNEAWMLS*SSGSSTLSASFLRR
Trigger: CCGCCTCAGGAAGCTGGCAGAGAGGGTGGACGACCCCGAACTCCAGGACAGCATCCAGGCCTCATTGGACAGCATTCGAGAGGCTGTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR CAA 90 bp TTACAAGGCCCCCGCAGCCCTCTTAGCCCGCTCCTGCTCCATCCCTTCTCCCTCAGCACTGATCCTGTCTaGTGTCCCCACCAGTGCCAA +
Preference number: 5 (lower is better)
Translates to: LQGPRSPLSPLLLHPFSLSTDPV*CPHQCQ
Trigger: TTGGCACTGGTGGGGACACAAGACAGGATCAGTGCT...GAGGGAGAAGGGATGGAGCAGGAGCGGGCTAAGAGGGCTGCGGGGGCCTTGTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CAA 90 bp CCCAGATCACCACGGGCGCTGCACAGTCACAGGTACGCAGTCACGGTCACAGACCTGTCTGTGCGCAGCTaGACCTTGCTGCTCTCACAG +
Preference number: 5 (lower is better)
Translates to: PRSPRALHSHRYAVTVTDLSVRS*TLLLSQ
Trigger: CTGTGAGAGCAGCAAGGTCAAGCTGCGCACAGACAG...GTCTGTGACCGTGACTGCGTACCTGTGACTGTGCAGCGCCCGTGGTGATCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CAA 90 bp CCTGGTTTCCACTACTCACGGTCCCTTTCACGGAAAGGGTTGGGAACCCCCACCTGGCTGGACTCGGAGTaGGTGGGAGGGTTAGCGGAG +
Preference number: 5 (lower is better)
Translates to: PGFHYSRSLSRKGLGTPTWLDSE*VGGLAE
Trigger: CTCCGCTAACCCTCCCACCAACTCCGAGTCCAGCCA...GGTGGGGGTTCCCAACCCTTTCCGTGAAAGGGACCGTGAGTAGTGGAAACCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328568.9
CDS-3UTR CAA 90 bp GCTCCCGCCCTGGGATTGTTGAGCTCGGGCAGGACCGGGTCTTCTTTCCGCCCCATGCCGCTGATAAACTaGAGCATCTTGCGGTCACGA +
Preference number: 5 (lower is better)
Translates to: APALGLLSSGRTGSSFRPMPLIN*SILRSR
Trigger: TCGTGACCGCAAGATGCTCAAGTTTATCAGCGGCAT...GGGGCGGAAAGAAGACCCGGTCCTGCCCGAGCTCAACAATCCCAGGGCGGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328568.9
CDS-3UTR CAA 90 bp CCCAGATCACCACGGGCGCTGCACAGTCACAGGTACGCAGTCACGGTCACAGACGGCCCTCCTGTGCTCTaGGTGAAGATGCCGCTGATA +
Preference number: 5 (lower is better)
Translates to: PRSPRALHSHRYAVTVTDGPPVL*VKMPLI
Trigger: TATCAGCGGCATCTTCACCAAGAGCACAGGAGGGCC...GTCTGTGACCGTGACTGCGTACCTGTGACTGTGCAGCGCCCGTGGTGATCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328568.9
CDS-3UTR CAA 90 bp GCTCGGGCAGGACCGGGTCTTCTTTCCGCCCCTAGGGGGCACAAGCGGGCATGTGTCCATTCCTGGCTATaGATCACAGCCTTAGGGGAA +
Preference number: 5 (lower is better)
Translates to: ARAGPGLLSAPRGHKRACVHSWL*ITALGE
Trigger: TTCCCCTAAGGCTGTGATCAATAGCCAGGAATGGAC...ACATGCCCGCTTGTGCCCCCTAGGGGCGGAAAGAAGACCCGGTCCTGCCCGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328568.9
CDS TCA 90 bp CTGTCTTCTCCAGCACCTGGTATGAGCCAGTCAGGAATCGGTGGATaGGCGATGACTTCCCACTCCTGGCATCGCCCAGCACACCCAGGC +
Preference number: 5 (lower is better)
Translates to: LSSPAPGMSQSGIGG*AMTSHSWHRPAHPG
Trigger: GCCTGGGTGTGCTGGGCGATGCCAGGAGTGGGAAGTCATCGCTCATCCACCGATTCCTGACTGGCTCATACCAGGTGCTGGAGAAGACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257897.7
ENST00000328568.9
ENST00000547588.6
CDS TCA 90 bp GGTGTGGAAGACAGCAGATGGAAGGTCATCCCCACTGACCCGTGCTaGGGGCTCGGGCCAAATTCCGGTCTGGCTTCAGCAGGTGTTTGG +
Preference number: 5 (lower is better)
Translates to: GVEDSRWKVIPTDPC*GLGPNSGLASAGVW
Trigger: CCAAACACCTGCTGAAGCCAGACCGGAATTTGGCCCGAGCCCTCAGCACGGGTCAGTGGGGATGACCTTCCATCTGCTGTCTTCCACACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549129.1
CDS CCA 90 bp TCATCCCCACTGACCCGTGCTGAGGGCTCGGGCCAAATTCCGGTCTaGCTTCAGCAGGTGTTTGGATGTCTGATCTGGTGGTGGCTGCAG +
Preference number: 5 (lower is better)
Translates to: SSPLTRAEGSGQIPV*LQQVFGCLIWWWLQ
Trigger: CTGCAGCCACCACCAGATCAGACATCCAAACACCTGCTGAAGCCAGACCGGAATTTGGCCCGAGCCCTCAGCACGGGTCAGTGGGGATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549129.1
CDS-3UTR CAA 90 bp GGGAACAAAGCAATAAATTACAAGGCCCCCGCAGCCCTCTTAGCCCGCTCCTGCGCCCAGCCTGAGAACTaGGCATCAGGTGCCCCAGCT +
Preference number: 5 (lower is better)
Translates to: GNKAINYKAPAALLARSCAQPEN*ASGAPA
Trigger: AGCTGGGGCACCTGATGCCAAGTTCTCAGGCTGGGC...GCAGGAGCGGGCTAAGAGGGCTGCGGGGGCCTTGTAATTTATTGCTTTGTTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CAA 90 bp GGTTTCCACTACTCACGGTCCCTTTCACGGAAAGGGTTGGGAACCCCCACCCCCCAGATTGAATTCCCCTaGGCGTTCCGGATCGCCTGG +
Preference number: 5 (lower is better)
Translates to: GFHYSRSLSRKGLGTPTPQIEFP*AFRIAW
Trigger: CCAGGCGATCCGGAACGCCAAGGGGAATTCAATCTG...GGGGGTGGGGGTTCCCAACCCTTTCCGTGAAAGGGACCGTGAGTAGTGGAAACC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CAA 90 bp AACCCCGAGCGGGTAGACCCAGAGCAATCCGAGTGTGGAAACAATGGAGAGGGGGTACCACAGCAGCAGTaGCGTGATGACGACGTGGGC +
Preference number: 5 (lower is better)
Translates to: NPERVDPEQSECGNNGEGVPQQQ*RDDDVG
Trigger: GCCCACGTCGTCATCACGCAACTGCTGCTGTGGTAC...CCCCTCTCCATTGTTTCCACACTCGGATTGCTCTGGGTCTACCCGCTCGGGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CAA 90 bp TTTAGCTTCCACCCATGGGTAGGTGTAGGGGACGTCCTGGTTTCCACTACTCACGCTCCCGCCCTGGGATaGTTGAGCTCGGGCAGGACC +
Preference number: 5 (lower is better)
Translates to: FSFHPWVGVGDVLVSTTHAPALG*LSSGRT
Trigger: GGTCCTGCCCGAGCTCAACAATCCCAGGGCGGGAGC...GTGAGTAGTGGAAACCAGGACGTCCCCTACACCTACCCATGGGTGGAAGCTAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS CCA 90 bp CTCTCTGTCTTCTCCAGCACCTGGTATGAGCCAGTCAGGAATCGGTaGATGAGCGATGACTTCCCACTCCTGGCATCGCCCAGCACACCC +
Preference number: 5 (lower is better)
Translates to: LSVFSSTWYEPVRNR*MSDDFPLLASPSTP
Trigger: GGGTGTGCTGGGCGATGCCAGGAGTGGGAAGTCATCGCTCATCCACCGATTCCTGACTGGCTCATACCAGGTGCTGGAGAAGACAGAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257897.7
ENST00000328568.9
ENST00000547588.6
CDS CCA 90 bp AGATGGGGTACAGTCCGTGCTGAGGGCTCGGGCCAAATTCCGGTCTaGCTTCAGCAGGTGTTTGGATGTCTGATCTGGTGGTGGCTGCAG +
Preference number: 5 (lower is better)
Translates to: RWGTVRAEGSGQIPV*LQQVFGCLIWWWLQ
Trigger: CTGCAGCCACCACCAGATCAGACATCCAAACACCTGCTGAAGCCAGACCGGAATTTGGCCCGAGCCCTCAGCACGGACTGTACCCCATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257897.7
ENST00000328568.9
ENST00000547588.6
CDS-3UTR CAA 90 bp TCTGCCTGTCCCTGTCCAACCCCAGTACCCCATCTTGACCAAGGCCATGCCCTGAGCAAGTCCATCTCCTaGCCGTGGGTACTGTGGATG +
Preference number: 5 (lower is better)
Translates to: SACPCPTPVPHLDQGHALSKSIS*PWVLWM
Trigger: CATCCACAGTACCCACGGCAAGGAGATGGACTTGCT...CAGGGCATGGCCTTGGTCAAGATGGGGTACTGGGGTTGGACAGGGACAGGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR CAA 90 bp CCACCCATGGGTAGGTGTAGGGGACGTCCTGGTTTCCACTACTCACGGTCCCTTCGCTTGCCCGGGACTTaGACTGTTGTTCGCAGCAAG +
Preference number: 5 (lower is better)
Translates to: PPMGRCRGRPGFHYSRSLRLPGT*TVVRSK
Trigger: CTTGCTGCGAACAACAGTCAAAGTCCCGGGCAAGCG...AAGGGACCGTGAGTAGTGGAAACCAGGACGTCCCCTACACCTACCCATGGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CAA 90 bp CCCAGATCACCACGGGCGCTGCACAGTCACAGGTACGCAGTCACGGTCACAGACACAGTGCTCATGTCCTaGACGAGCCCGTTAATGCTG +
Preference number: 5 (lower is better)
Translates to: PRSPRALHSHRYAVTVTDTVLMS*TSPLML
Trigger: CAGCATTAACGGGCTCGTCAAGGACATGAGCACTGT...GTCTGTGACCGTGACTGCGTACCTGTGACTGTGCAGCGCCCGTGGTGATCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CAA 90 bp CTGGTTTCCACTACTCACGGTCCCTTTCACGGAAAGGGTTGGGAACCCCCACCCGTGCGCAGCTTGACCTaGCTGCTCTCACAGCATTGC +
Preference number: 5 (lower is better)
Translates to: LVSTTHGPFHGKGWEPPPVRSLT*LLSQHC
Trigger: GCAATGCTGTGAGAGCAGCAAGGTCAAGCTGCGCAC...GGGTGGGGGTTCCCAACCCTTTCCGTGAAAGGGACCGTGAGTAGTGGAAACCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CAA 90 bp CCTGGTTTCCACTACTCACGGTCCCTTTCACGGAAAGGGTTGGGAACCCCCACCAGTAGCTGCTCGTACTaGGCGCGAATCCACGACTCG +
Preference number: 5 (lower is better)
Translates to: PGFHYSRSLSRKGLGTPTSSCSY*ARIHDS
Trigger: CGAGTCGTGGATTCGCGCCAAGTACGAGCAGCTACT...GGTGGGGGTTCCCAACCCTTTCCGTGAAAGGGACCGTGAGTAGTGGAAACCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CAA 90 bp GGGAACAAAGCAATAAATTACAAGGCCCCCGCAGCCCTCTTAGCCCGCTCCTGCGTACCACAGCAGCAGTaGCGTGATGACGACGTGGGC +
Preference number: 5 (lower is better)
Translates to: GNKAINYKAPAALLARSCVPQQQ*RDDDVG
Trigger: GCCCACGTCGTCATCACGCAACTGCTGCTGTGGTAC...GCAGGAGCGGGCTAAGAGGGCTGCGGGGGCCTTGTAATTTATTGCTTTGTTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CAA 90 bp CTCCACTACATGAACCCAGAACTGTTGTACATGATGGAACCACCTCCATGCCCACCCGCCCTGGGATTGTaGAGCTCGGGCAGGACCGGG +
Preference number: 5 (lower is better)
Translates to: LHYMNPELLYMMEPPPCPPALGL*SSGRTG
Trigger: CCCGGTCCTGCCCGAGCTCAACAATCCCAGGGCGGG...TGGGCATGGAGGTGGTTCCATCATGTACAACAGTTCTGGGTTCATGTAGTGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR CAA 90 bp AACCCCGAGCGGGTAGACCCAGAGCAATCCGAGTGTGGAAACAATGGAGAGGGGGCCTTGGTGGTCCCTTaGATGGCACGGAGGTGGATA +
Preference number: 5 (lower is better)
Translates to: NPERVDPEQSECGNNGEGALVVP*MARRWI
Trigger: TATCCACCTCCGTGCCATCAAAGGGACCACCAAGGC...CCCCTCTCCATTGTTTCCACACTCGGATTGCTCTGGGTCTACCCGCTCGGGGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS TCA 90 bp ATCCTATTTGGGTGTGGAAGACAGCAGATGGAAGGTCATCCCCACTaGCCCGTGCTGAGGGCTCGGGCCAAATTCCGGTCTGGCTTCAGC +
Preference number: 5 (lower is better)
Translates to: ILFGCGRQQMEGHPH*PVLRARAKFRSGFS
Trigger: GCTGAAGCCAGACCGGAATTTGGCCCGAGCCCTCAGCACGGGTCAGTGGGGATGACCTTCCATCTGCTGTCTTCCACACCCAAATAGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549129.1
CDS CCA 90 bp CTAGGGCTTGGCATGGGAGTAGTGGCTTCCAGGCCTTCACCCATCTaGACAGTGCTCATGTCCTTGACGAGCCCGTTAATGCTGGCTGAG +
Preference number: 5 (lower is better)
Translates to: LGLGMGVVASRPSPI*TVLMSLTSPLMLAE
Trigger: CTCAGCCAGCATTAACGGGCTCGTCAAGGACATGAGCACTGTCCAGATGGGTGAAGGCCTGGAAGCCACTACTCCCATGCCAAGCCCTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257897.7
ENST00000328568.9
ENST00000547588.6
ENST00000549129.1
CDS-3UTR CAA 90 bp CTGGTTTCCACTACTCACGGTCCCTTTCACGGAAAGGGTTGGGAACCCCCACCCAGAAGCTGTTGCTGCTaGCGCAAGGTCACCACCTTC +
Preference number: 5 (lower is better)
Translates to: LVSTTHGPFHGKGWEPPPRSCCC*RKVTTF
Trigger: GAAGGTGGTGACCTTGCGCAAGCAGCAACAGCTTCT...GGGTGGGGGTTCCCAACCCTTTCCGTGAAAGGGACCGTGAGTAGTGGAAACCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CAA 90 bp GGGAACAAAGCAATAAATTACAAGGCCCCCGCAGCCCTCTTAGCCCGCTCCTGCGTGCGCAGCTTGACCTaGCTGCTCTCACAGCATTGC +
Preference number: 5 (lower is better)
Translates to: GNKAINYKAPAALLARSCVRSLT*LLSQHC
Trigger: GCAATGCTGTGAGAGCAGCAAGGTCAAGCTGCGCAC...GCAGGAGCGGGCTAAGAGGGCTGCGGGGGCCTTGTAATTTATTGCTTTGTTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CAA 90 bp GGGAACAAAGCAATAAATTACAAGGCCCCCGCAGCCCTCTTAGCCCGCTCCTGCCGCAGTCCACGCAGATaGAATTCCCCTTGGCGTTCC +
Preference number: 5 (lower is better)
Translates to: GNKAINYKAPAALLARSCRSPRR*NSPWRS
Trigger: GGAACGCCAAGGGGAATTCAATCTGCGTGGACTGCG...GCAGGAGCGGGCTAAGAGGGCTGCGGGGGCCTTGTAATTTATTGCTTTGTTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CAA 90 bp GGTTTCCACTACTCACGGTCCCTTTCACGGAAAGGGTTGGGAACCCCCACCCCCACTGCACCTGCACTGTaGAATCCACCTTTCCTGGGT +
Preference number: 5 (lower is better)
Translates to: GFHYSRSLSRKGLGTPTPTAPAL*NPPFLG
Trigger: ACCCAGGAAAGGTGGATTCAACAGTGCAGGTGCAGT...GGGGGTGGGGGTTCCCAACCCTTTCCGTGAAAGGGACCGTGAGTAGTGGAAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR CAA 90 bp GCAGTGGAGGGGCAGGTTTCAAAATCAGATCTGTCTCCAAAGTTCCTGCTCTTAGCCCTCGGGGGCCGCTaGCCCGGGACTTTGACTGTT +
Preference number: 5 (lower is better)
Translates to: AVEGQVSKSDLSPKFLLLALGGR*PGTLTV
Trigger: AACAGTCAAAGTCCCGGGCAAGCGGCCCCCGAGGGC...TAAGAGCAGGAACTTTGGAGACAGATCTGATTTTGAAACCTGCCCCTCCACTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR CAA 90 bp TTACAAGGCCCCCGCAGCCCTCTTAGCCCGCTCCTGCTCCATCCCTTCTCCCTCATGAACCCAGAACTGTaGTACATGATGGAACCACCT +
Preference number: 5 (lower is better)
Translates to: LQGPRSPLSPLLLHPFSLMNPEL*YMMEPP
Trigger: AGGTGGTTCCATCATGTACAACAGTTCTGGGTTCAT...GAGGGAGAAGGGATGGAGCAGGAGCGGGCTAAGAGGGCTGCGGGGGCCTTGTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR CAA 90 bp TTTAGCTTCCACCCATGGGTAGGTGTAGGGGACGTCCTGGTTTCCACTACTCACCTCTGGGCATGCATGTaGCCCAGACCTGTCTTGCCA +
Preference number: 5 (lower is better)
Translates to: FSFHPWVGVGDVLVSTTHLWACM*PRPVLP
Trigger: TGGCAAGACAGGTCTGGGCAACATGCATGCCCAGAG...GTGAGTAGTGGAAACCAGGACGTCCCCTACACCTACCCATGGGTGGAAGCTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR CAA 90 bp CTGGTTTCCACTACTCACGGTCCCTTTCACGGAAAGGGTTGGGAACCCCCACCCGTCCATTCCTGGCTATaGATCACAGCCTCTCGAATG +
Preference number: 5 (lower is better)
Translates to: LVSTTHGPFHGKGWEPPPVHSWL*ITASRM
Trigger: CATTCGAGAGGCTGTGATCAATAGCCAGGAATGGAC...GGGTGGGGGTTCCCAACCCTTTCCGTGAAAGGGACCGTGAGTAGTGGAAACCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR CAA 90 bp CCCTGGCTGGGAGAGGTCACGGGGGTGAGGAATGGCTCTGGAGCTGCTCCAGTGCAATTACCTGGTCCTTaGCAAACTATTTTAGCCAGA +
Preference number: 5 (lower is better)
Translates to: PWLGEVTGVRNGSGAAPVQLPGP*QTILAR
Trigger: TCTGGCTAAAATAGTTTGCAAAGGACCAGGTAATTG...CACTGGAGCAGCTCCAGAGCCATTCCTCACCCCCGTGACCTCTCCCAGCCAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CAA 90 bp CCAGCCTCCAAGCCTTCACCCCATATTCATTTCCCACACTCATCCTATTTGGGTCTCGCCCACTCCCTGTaGTCTCTCCCCGACTATCCA +
Preference number: 5 (lower is better)
Translates to: PASKPSPHIHFPHSSYLGLAHSL*SLPDYP
Trigger: TGGATAGTCGGGGAGAGACAACAGGGAGTGGGCGAG...ACCCAAATAGGATGAGTGTGGGAAATGAATATGGGGTGAAGGCTTGGAGGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549129.1
CDS-3UTR CAA 90 bp TTACAAGGCCCCCGCAGCCCTCTTAGCCCGCTCCTGCTCCATCCCTTCTCCCTCTCTTTGTTCAAGGAATaGCCACTTCGTTTTAGTAGG +
Preference number: 5 (lower is better)
Translates to: LQGPRSPLSPLLLHPFSLSLFKE*PLRFSR
Trigger: CCTACTAAAACGAAGTGGCAATTCCTTGAACAAAGA...GAGGGAGAAGGGATGGAGCAGGAGCGGGCTAAGAGGGCTGCGGGGGCCTTGTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257897.7
ENST00000328568.9
CDS-3UTR CAA 90 bp TATTCCAGCCTCCAAGCCTTCACCCCATATTCATTTCCCACACTCATCCTATTTGCCCTCGGGGGCCGCTaGCCCGGGACTTTGACTGTT +
Preference number: 5 (lower is better)
Translates to: YSSLQAFTPYSFPTLILFALGGR*PGTLTV
Trigger: AACAGTCAAAGTCCCGGGCAAGCGGCCCCCGAGGGC...AAATAGGATGAGTGTGGGAAATGAATATGGGGTGAAGGCTTGGAGGCTGGAATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000549129.1
CDS-3UTR CAA 90 bp TTTAGCTTCCACCCATGGGTAGGTGTAGGGGACGTCCTGGTTTCCACTACTCACCACCTGCCTCTGTACTaGTCACTGCACCTGCACTGT +
Preference number: 5 (lower is better)
Translates to: FSFHPWVGVGDVLVSTTHHLPLY*SLHLHC
Trigger: ACAGTGCAGGTGCAGTGACAAGTACAGAGGCAGGTG...GTGAGTAGTGGAAACCAGGACGTCCCCTACACCTACCCATGGGTGGAAGCTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR CAA 90 bp GCAGTGGAGGGGCAGGTTTCAAAATCAGATCTGTCTCCAAAGTTCCTGCTCTTACTCGCCCACTCCCTGTaGTCTCTCCCCGACTATCCA +
Preference number: 5 (lower is better)
Translates to: AVEGQVSKSDLSPKFLLLLAHSL*SLPDYP
Trigger: TGGATAGTCGGGGAGAGACAACAGGGAGTGGGCGAG...TAAGAGCAGGAACTTTGGAGACAGATCTGATTTTGAAACCTGCCCCTCCACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR CAA 90 bp CTCCAACCTGCCCACGTCCTCCACTACATGAACCCAGAACTGTTGTACATGATGAGTAGGAAGCTCTGTTaGATGGGGATGGCTCGCCCA +
Preference number: 5 (lower is better)
Translates to: LQPAHVLHYMNPELLYMMSRKLC*MGMARP
Trigger: TGGGCGAGCCATCCCCATCAAACAGAGCTTCCTACT...CATCATGTACAACAGTTCTGGGTTCATGTAGTGGAGGACGTGGGCAGGTTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR CAA 90 bp TCTGCCTGTCCCTGTCCAACCCCAGTACCCCATCTTGACCAAGGCCATGCCCTGCTTCCCACTTGCTCTTaGAAGGCAATTTCATTCTCT +
Preference number: 5 (lower is better)
Translates to: SACPCPTPVPHLDQGHALLPTCS*KAISFS
Trigger: AGAGAATGAAATTGCCTTCAAAGAGCAAGTGGGAAG...CAGGGCATGGCCTTGGTCAAGATGGGGTACTGGGGTTGGACAGGGACAGGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS CCA 90 bp AGCCTTCACCCCATATTCATTTCCCACACTCATCCTATTTGGGTGTaGAAGACAGCAGATGGAAGGTCATCCCCACTGACCCGTGCTGAG +
Preference number: 5 (lower is better)
Translates to: SLHPIFISHTHPIWV*KTADGRSSPLTRAE
Trigger: CTCAGCACGGGTCAGTGGGGATGACCTTCCATCTGCTGTCTTCCACACCCAAATAGGATGAGTGTGGGAAATGAATATGGGGTGAAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549129.1
CDS CCA 90 bp CCTCCAAGCCTTCACCCCATATTCATTTCCCACACTCATCCTATTTaGGTGTGGAAGACAGCAGATGGAAGGTCATCCCCACTGACCCGT +
Preference number: 5 (lower is better)
Translates to: PPSLHPIFISHTHPI*VWKTADGRSSPLTR
Trigger: ACGGGTCAGTGGGGATGACCTTCCATCTGCTGTCTTCCACACCCAAATAGGATGAGTGTGGGAAATGAATATGGGGTGAAGGCTTGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549129.1
CDS-3UTR CAA 90 bp TCTGCCTGTCCCTGTCCAACCCCAGTACCCCATCTTGACCAAGGCCATGCCCTGTCTTTGTTCAAGGAATaGCCACTTCGTTTTAGTAGG +
Preference number: 5 (lower is better)
Translates to: SACPCPTPVPHLDQGHALSLFKE*PLRFSR
Trigger: CCTACTAAAACGAAGTGGCAATTCCTTGAACAAAGA...CAGGGCATGGCCTTGGTCAAGATGGGGTACTGGGGTTGGACAGGGACAGGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR CAA 90 bp ATTCCAGCCTCCAAGCCTTCACCCCATATTCATTTCCCACACTCATCCTATTTGCGCTTGCCCGGGACTTaGACTGTTGTTCGCAGCAAG +
Preference number: 5 (lower is better)
Translates to: IPASKPSPHIHFPHSSYLRLPGT*TVVRSK
Trigger: CTTGCTGCGAACAACAGTCAAAGTCCCGGGCAAGCG...CAAATAGGATGAGTGTGGGAAATGAATATGGGGTGAAGGCTTGGAGGCTGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549129.1
CDS-3UTR CAA 90 bp TTTAGCTTCCACCCATGGGTAGGTGTAGGGGACGTCCTGGTTTCCACTACTCACATAAACTTGAGCATCTaGCGGTCACGAGTGGATGCT +
Preference number: 5 (lower is better)
Translates to: FSFHPWVGVGDVLVSTTHINLSI*RSRVDA
Trigger: AGCATCCACTCGTGACCGCAAGATGCTCAAGTTTAT...GTGAGTAGTGGAAACCAGGACGTCCCCTACACCTACCCATGGGTGGAAGCTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328568.9
CDS-3UTR CAA 90 bp TTATTCCAGCCTCCAAGCCTTCACCCCATATTCATTTCCCACACTCATCCTATTAGTAGGAAGCTCTGTTaGATGGGGATGGCTCGCCCA +
Preference number: 5 (lower is better)
Translates to: LFQPPSLHPIFISHTHPISRKLC*MGMARP
Trigger: TGGGCGAGCCATCCCCATCAAACAGAGCTTCCTACT...AATAGGATGAGTGTGGGAAATGAATATGGGGTGAAGGCTTGGAGGCTGGAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549129.1
CDS-3UTR CAA 90 bp TATTCCAGCCTCCAAGCCTTCACCCCATATTCATTTCCCACACTCATCCTATTTAGCAAGTCCATCTCCTaGCCGTGGGTACTGTGGATG +
Preference number: 5 (lower is better)
Translates to: YSSLQAFTPYSFPTLILFSKSIS*PWVLWM
Trigger: CATCCACAGTACCCACGGCAAGGAGATGGACTTGCT...AAATAGGATGAGTGTGGGAAATGAATATGGGGTGAAGGCTTGGAGGCTGGAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549129.1
CDS-3UTR CAA 90 bp TATTCCAGCCTCCAAGCCTTCACCCCATATTCATTTCCCACACTCATCCTATTTACAGTGCTCATGTCCTaGACGAGCCCGTTAATGCTG +
Preference number: 5 (lower is better)
Translates to: YSSLQAFTPYSFPTLILFTVLMS*TSPLML
Trigger: CAGCATTAACGGGCTCGTCAAGGACATGAGCACTGT...AAATAGGATGAGTGTGGGAAATGAATATGGGGTGAAGGCTTGGAGGCTGGAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549129.1
CDS-3UTR CAA 90 bp GCAGTGGAGGGGCAGGTTTCAAAATCAGATCTGTCTCCAAAGTTCCTGCTCTTAAGGTTTGCTGACACCTaGACCATTTTTCACTGGCTG +
Preference number: 5 (lower is better)
Translates to: AVEGQVSKSDLSPKFLLLRFADT*TIFHWL
Trigger: CAGCCAGTGAAAAATGGTCAAGGTGTCAGCAAACCT...TAAGAGCAGGAACTTTGGAGACAGATCTGATTTTGAAACCTGCCCCTCCACTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS-3UTR CAA 90 bp TTATTCCAGCCTCCAAGCCTTCACCCCATATTCATTTCCCACACTCATCCTATTCCACACTCATCCTATTaGGGTGTGGAAGACAGCAGA +
Preference number: 5 (lower is better)
Translates to: LFQPPSLHPIFISHTHPIPHSSY*GVEDSR
Trigger: TCTGCTGTCTTCCACACCCAAATAGGATGAGTGTGG...AATAGGATGAGTGTGGGAAATGAATATGGGGTGAAGGCTTGGAGGCTGGAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549129.1
CDS-3UTR CAA 90 bp TTCCAGCCTCCAAGCCTTCACCCCATATTCATTTCCCACACTCATCCTATTTGGTCTTTGTTCAAGGAATaGCCACTTCGTTTTAGTAGG +
Preference number: 5 (lower is better)
Translates to: FQPPSLHPIFISHTHPIWSLFKE*PLRFSR
Trigger: CCTACTAAAACGAAGTGGCAATTCCTTGAACAAAGA...CCAAATAGGATGAGTGTGGGAAATGAATATGGGGTGAAGGCTTGGAGGCTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549129.1
CDS GCA 72 bp GCTGGCTTCCAGCCTGGCGGGCGTAGAACAGCGCCGTaGGGCCCTGGGCGTCACGGGCCGCCACGTCCGCGC +
Preference number: 6 (lower is better)
Translates to: AGFQPGGRRTAP*GPGRHGPPRPR
Trigger: GCGCGGACGTGGCGGCCCGTGACGCCCAGGGCCGCACGGCGCTGTTCTACGCCCGCCAGGCTGGAAGCCAGC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257897.7
ENST00000328568.9
ENST00000547588.6
CDS GCA 72 bp CTGCGCCCCCACCCTCTTGGAGCCCCGGGACCTTGGTaGTGCTCCAGGGAGGCGCGCCGGACCGTCCACCCC +
Preference number: 6 (lower is better)
Translates to: LRPHPLGAPGPW*CSREARRTVHP
Trigger: GGGGTGGACGGTCCGGCGCGCCTCCCTGGAGCAGCACCAAGGTCCCGGGGCTCCAAGAGGGTGGGGGCGCAG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547588.6
CDS CCA 72 bp GCCCTGCGCCCCCACCCTCTTGGAGCCCCGGGACCTTaGTGCTGCTCCAGGGAGGCGCGCCGGACCGTCCAC +
Preference number: 6 (lower is better)
Translates to: ALRPHPLGAPGP*CCSREARRTVH
Trigger: GTGGACGGTCCGGCGCGCCTCCCTGGAGCAGCACCAAGGTCCCGGGGCTCCAAGAGGGTGGGGGCGCAGGGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547588.6
CDS CAA 72 bp CGCCCTGCGCCCCCACCCTCTTGGAGCCCCGGGACCTaGGTGCTGCTCCAGGGAGGCGCGCCGGACCGTCCA +
Preference number: 6 (lower is better)
Translates to: RPAPPPSWSPGT*VLLQGGAPDRP
Trigger: TGGACGGTCCGGCGCGCCTCCCTGGAGCAGCACCAAGGTCCCGGGGCTCCAAGAGGGTGGGGGCGCAGGGCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547588.6
CDS TCA 72 bp CCCCTTGACCCTGGGCTTGCCCTCGCTTTCGGGCCATaGCAGGCGGCTACCCGCGCCCTTGCCCCCGCCGGC +
Preference number: 6 (lower is better)
Translates to: PLDPGLALAFGP*QAATRALAPAG
Trigger: GCCGGCGGGGGCAAGGGCGCGGGTAGCCGCCTGTCATGGCCCGAAAGCGAGGGCAAGCCCAGGGTCAAGGGG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328568.9
ENST00000547588.6
CDS GCA 72 bp GCCGCTTCTTGCCCGGCTCCTCCGCGCCTCGGGGGCTaGCAGGATCCCCAGTCTCGGAGCCTCTGGCACCGG +
Preference number: 6 (lower is better)
Translates to: AASCPAPPRLGG*QDPQSRSLWHR
Trigger: CCGGTGCCAGAGGCTCCGAGACTGGGGATCCTGGCAGCCCCCGAGGCGCGGAGGAGCCGGGCAAGAAGCGGC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547588.6
CDS GCA 72 bp CGGGCCGCCACGTCCGCGCCGTACCACAGCAGCAGTTaGGTGATGACGACGTGGGCGAGCTCGGCCGCCAGG +
Preference number: 6 (lower is better)
Translates to: RAATSAPYHSSS*VMTTWASSAAR
Trigger: CCTGGCGGCCGAGCTCGCCCACGTCGTCATCACGCAACTGCTGCTGTGGTACGGCGCGGACGTGGCGGCCCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257897.7
ENST00000328568.9
ENST00000547588.6
CDS GCA 72 bp CGCTTTCGGGCCATGACAGGCGGCTACCCGCGCCCTTaGCCCCGCCGGCTTTGGCTCCACTCGTGGTCACGG +
Preference number: 6 (lower is better)
Translates to: RFRAMTGGYPRP*PRRLWLHSWSR
Trigger: CCGTGACCACGAGTGGAGCCAAAGCCGGCGGGGGCAAGGGCGCGGGTAGCCGCCTGTCATGGCCCGAAAGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328568.9
ENST00000547588.6
CDS CCA 72 bp TCCGCCCGGTGTGGTCGTGCCCGGCCCGCGTGGGGATaGGGGTGTCTCTCCCGCTGGGCAACTATACCAGCG +
Preference number: 6 (lower is better)
Translates to: SARCGRARPAWG*GCLSRWATIPA
Trigger: CGCTGGTATAGTTGCCCAGCGGGAGAGACACCCCCATCCCCACGCGGGCCGGGCACGACCACACCGGGCGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257897.7
ENST00000328568.9
ENST00000547588.6
CDS CAA 72 bp GACTCGCGCTCCTCCCGCGAAGAGTCCCGCGAGGGCTaGGCACGGCCTCGCGTGTCGCTTTCCCACACGCGG +
Preference number: 6 (lower is better)
Translates to: DSRSSREESREG*ARPRVSLSHTR
Trigger: CCGCGTGTGGGAAAGCGACACGCGAGGCCGTGCCAAGCCCTCGCGGGACTCTTCGCGGGAGGAGCGCGAGTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257897.7
ENST00000328568.9
ENST00000547588.6
CDS CAA 72 bp TTGCAAGGCTTGGGAGCCGGCGGAGGAGGCGCCACCTaGAGCCTCCGGCTGCCGGTGCCAGGGTGCGGAGAG +
Preference number: 6 (lower is better)
Translates to: LQGLGAGGGGAT*SLRLPVPGCGE
Trigger: CTCTCCGCACCCTGGCACCGGCAGCCGGAGGCTCAAGGTGGCGCCTCCTCCGCCGGCTCCCAAGCCTTGCAA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328568.9
ENST00000547588.6
CDS CAA 72 bp CCCCCGCCGGCTTTGGCTCCACTCGTGGTCACGGTCTaGCAAGGCTTGGGAGCCGGCGGAGGAGGCGCCACC +
Preference number: 6 (lower is better)
Translates to: PPPALAPLVVTV*QGLGAGGGGAT
Trigger: GGTGGCGCCTCCTCCGCCGGCTCCCAAGCCTTGCAAGACCGTGACCACGAGTGGAGCCAAAGCCGGCGGGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328568.9
ENST00000547588.6
CDS CAA 90 bp TCGGGCCATGACAGGCGGCTACCCGCGCCCTTGCCCCCGCCGGCTTaGGCTCCACTCGTGGTCACGGTCTTGCAAGGCTTGGGAGCCGGC +
Preference number: 6 (lower is better)
Translates to: SGHDRRLPAPLPPPA*APLVVTVLQGLGAG
Trigger: GCCGGCTCCCAAGCCTTGCAAGACCGTGACCACGAGTGGAGCCAAAGCCGGCGGGGGCAAGGGCGCGGGTAGCCGCCTGTCATGGCCCGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328568.9
ENST00000547588.6
CDS GCA 72 bp CCCCGCCGGCTTTGGCTCCACTCGTGGTCACGGTCTTaGAAGGCTTGGGAGCCGGCGGAGGAGGCGCCACCT +
Preference number: 6 (lower is better)
Translates to: PRRLWLHSWSRS*KAWEPAEEAPP
Trigger: AGGTGGCGCCTCCTCCGCCGGCTCCCAAGCCTTGCAAGACCGTGACCACGAGTGGAGCCAAAGCCGGCGGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328568.9
ENST00000547588.6
CDS CCA 72 bp GCTGGTCCTGCGCTTGGCTGCCCGGTGCAGGGACCCTaGGGTGCTCAATCCAGCCACTGCAGCTGCCTCGGC +
Preference number: 6 (lower is better)
Translates to: AGPALGCPVQGP*GAQSSHCSCLG
Trigger: GCCGAGGCAGCTGCAGTGGCTGGATTGAGCACCCCAGGGTCCCTGCACCGGGCAGCCAAGCGCAGGACCAGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257897.7
ENST00000328568.9
ENST00000547588.6
CDS CCA 72 bp ACTCGCGCTCCTCCCGCGAAGAGTCCCGCGAGGGCTTaGCACGGCCTCGCGTGTCGCTTTCCCACACGCGGT +
Preference number: 6 (lower is better)
Translates to: TRAPPAKSPARA*HGLACRFPTRG
Trigger: ACCGCGTGTGGGAAAGCGACACGCGAGGCCGTGCCAAGCCCTCGCGGGACTCTTCGCGGGAGGAGCGCGAGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257897.7
ENST00000328568.9
ENST00000547588.6
CDS CCA 72 bp GCATGGGCCAAAAGCAGGAGAACGGTAGCCACGTCCTaGGCCTGCACGGCGGCCCACAGCTGGCGGCCCAGC +
Preference number: 6 (lower is better)
Translates to: AWAKSRRTVATS*ACTAAHSWRPS
Trigger: GCTGGGCCGCCAGCTGTGGGCCGCCGTGCAGGCCCAGGACGTGGCTACCGTTCTCCTGCTTTTGGCCCATGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257897.7
ENST00000328568.9
ENST00000547588.6
CDS CCA 72 bp GCGCCGTACCACAGCAGCAGTTGCGTGATGACGACGTaGGCGAGCTCGGCCGCCAGGTGGAGTGGGGAGCGC +
Preference number: 6 (lower is better)
Translates to: APYHSSSCVMTT*ASSAARWSGER
Trigger: GCGCTCCCCACTCCACCTGGCGGCCGAGCTCGCCCACGTCGTCATCACGCAACTGCTGCTGTGGTACGGCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257897.7
ENST00000328568.9
ENST00000547588.6
CDS CAA 72 bp TCGCTTTCGGGCCATGACAGGCGGCTACCCGCGCCCTaGCCCCCGCCGGCTTTGGCTCCACTCGTGGTCACG +
Preference number: 6 (lower is better)
Translates to: SLSGHDRRLPAP*PPPALAPLVVT
Trigger: CGTGACCACGAGTGGAGCCAAAGCCGGCGGGGGCAAGGGCGCGGGTAGCCGCCTGTCATGGCCCGAAAGCGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328568.9
ENST00000547588.6
CDS CAA 72 bp GCATCCTGCCGGTGGAAGAGACGTTCGTGCCGCTTCTaGCCCGGCTCCTCCGCGCCTCGGGGGCTGCCAGGA +
Preference number: 6 (lower is better)
Translates to: ASCRWKRRSCRF*PGSSAPRGLPG
Trigger: TCCTGGCAGCCCCCGAGGCGCGGAGGAGCCGGGCAAGAAGCGGCACGAACGTCTCTTCCACCGGCAGGATGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547588.6
CDS CAA 90 bp GGCTTGCCCTCGCTTTCGGGCCATGACAGGCGGCTACCCGCGCCCTaGCCCCCGCCGGCTTTGGCTCCACTCGTGGTCACGGTCTTGCAA +
Preference number: 6 (lower is better)
Translates to: GLPSLSGHDRRLPAP*PPPALAPLVVTVLQ
Trigger: TTGCAAGACCGTGACCACGAGTGGAGCCAAAGCCGGCGGGGGCAAGGGCGCGGGTAGCCGCCTGTCATGGCCCGAAAGCGAGGGCAAGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328568.9
ENST00000547588.6
CDS CAA 90 bp ATCCACAGCGCATCCTGCCGGTGGAAGAGACGTTCGTGCCGCTTCTaGCCCGGCTCCTCCGCGCCTCGGGGGCTGCCAGGATCCCCAGTC +
Preference number: 6 (lower is better)
Translates to: IHSASCRWKRRSCRF*PGSSAPRGLPGSPV
Trigger: GACTGGGGATCCTGGCAGCCCCCGAGGCGCGGAGGAGCCGGGCAAGAAGCGGCACGAACGTCTCTTCCACCGGCAGGATGCGCTGTGGAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547588.6
CDS GCA 72 bp CATCCTGCCGGTGGAAGAGACGTTCGTGCCGCTTCTTaGCCGGCTCCTCCGCGCCTCGGGGGCTGCCAGGAT +
Preference number: 6 (lower is better)
Translates to: HPAGGRDVRAAS*PAPPRLGGCQD
Trigger: ATCCTGGCAGCCCCCGAGGCGCGGAGGAGCCGGGCAAGAAGCGGCACGAACGTCTCTTCCACCGGCAGGATG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547588.6
CDS CCA 72 bp TGCGTGATGACGACGTGGGCGAGCTCGGCCGCCAGGTaGAGTGGGGAGCGCAGCTGTGGGTCCTCTACGCTG +
Preference number: 6 (lower is better)
Translates to: CVMTTWASSAAR*SGERSCGSSTL
Trigger: CAGCGTAGAGGACCCACAGCTGCGCTCCCCACTCCACCTGGCGGCCGAGCTCGCCCACGTCGTCATCACGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257897.7
ENST00000328568.9
ENST00000547588.6
CDS CCA 72 bp ACAGGCGGCTACCCGCGCCCTTGCCCCCGCCGGCTTTaGCTCCACTCGTGGTCACGGTCTTGCAAGGCTTGG +
Preference number: 6 (lower is better)
Translates to: TGGYPRPCPRRL*LHSWSRSCKAW
Trigger: CCAAGCCTTGCAAGACCGTGACCACGAGTGGAGCCAAAGCCGGCGGGGGCAAGGGCGCGGGTAGCCGCCTGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328568.9
ENST00000547588.6
CDS CAA 72 bp GACAGGCGGCTACCCGCGCCCTTGCCCCCGCCGGCTTaGGCTCCACTCGTGGTCACGGTCTTGCAAGGCTTG +
Preference number: 6 (lower is better)
Translates to: DRRLPAPLPPPA*APLVVTVLQGL
Trigger: CAAGCCTTGCAAGACCGTGACCACGAGTGGAGCCAAAGCCGGCGGGGGCAAGGGCGCGGGTAGCCGCCTGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328568.9
ENST00000547588.6
CDS CAA 90 bp GAAGCTCCAGTCCCGGCGCTGCTCTTTGACCCCTTGACCCTGGGCTaGCCCTCGCTTTCGGGCCATGACAGGCGGCTACCCGCGCCCTTG +
Preference number: 6 (lower is better)
Translates to: EAPVPALLFDPLTLG*PSLSGHDRRLPAPL
Trigger: CAAGGGCGCGGGTAGCCGCCTGTCATGGCCCGAAAGCGAGGGCAAGCCCAGGGTCAAGGGGTCAAAGAGCAGCGCCGGGACTGGAGCTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328568.9
ENST00000547588.6
CDS TCA 72 bp GGCAGAGACCGAAGCTCCAGTCCCGGCGCTGCTCTTTaGCCCCTTGACCCTGGGCTTGCCCTCGCTTTCGGG +
Preference number: 6 (lower is better)
Translates to: GRDRSSSPGAAL*PLDPGLALAFG
Trigger: CCCGAAAGCGAGGGCAAGCCCAGGGTCAAGGGGTCAAAGAGCAGCGCCGGGACTGGAGCTTCGGTCTCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328568.9
ENST00000547588.6
CDS GCA 72 bp CAGGGACCCTGGGGTGCTCAATCCAGCCACTGCAGCTaGCTCGGCTCGGAGCTCCCGGTGACCAACATTCGG +
Preference number: 6 (lower is better)
Translates to: QGPWGAQSSHCS*LGSELPVTNIR
Trigger: CCGAATGTTGGTCACCGGGAGCTCCGAGCCGAGGCAGCTGCAGTGGCTGGATTGAGCACCCCAGGGTCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257897.7
ENST00000328568.9
ENST00000547588.6
CDS GCA 72 bp GTGCCCGCGCTGCTCGTGCTGATCCACAGCGCATCCTaGCGGTGGAAGAGACGTTCGTGCCGCTTCTTGCCC +
Preference number: 6 (lower is better)
Translates to: VPALLVLIHSAS*RWKRRSCRFLP
Trigger: GGGCAAGAAGCGGCACGAACGTCTCTTCCACCGGCAGGATGCGCTGTGGATCAGCACGAGCAGCGCGGGCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547588.6
CDS CCA 72 bp GCGCTGCTCGTGCTGATCCACAGCGCATCCTGCCGGTaGAAGAGACGTTCGTGCCGCTTCTTGCCCGGCTCC +
Preference number: 6 (lower is better)
Translates to: ALLVLIHSASCR*KRRSCRFLPGS
Trigger: GGAGCCGGGCAAGAAGCGGCACGAACGTCTCTTCCACCGGCAGGATGCGCTGTGGATCAGCACGAGCAGCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547588.6
CDS TCA 72 bp CCAGCCACTGCAGCTGCCTCGGCTCGGAGCTCCCGGTaGCCAACATTCGGTGAGGACGGGAGGGAAGAAGAG +
Preference number: 6 (lower is better)
Translates to: PATAAASARSSR*PTFGEDGREEE
Trigger: CTCTTCTTCCCTCCCGTCCTCACCGAATGTTGGTCACCGGGAGCTCCGAGCCGAGGCAGCTGCAGTGGCTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257897.7
ENST00000328568.9
ENST00000547588.6
CDS GCA 72 bp GGAGGAAGCACTGATCCTGTCTTGTGTCCCCACCAGTaGCAAGGCCAGGCCTCCTCGTCCCTCCCCGCGAAG +
Preference number: 6 (lower is better)
Translates to: GGSTDPVLCPHQ*QGQASSSLPAK
Trigger: CTTCGCGGGGAGGGACGAGGAGGCCTGGCCTTGGCACTGGTGGGGACACAAGACAGGATCAGTGCTTCCTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257897.7
ENST00000328568.9
ENST00000547588.6
CDS GCA 72 bp GCGGGGAATTGGGACTCAAGGGACAGGGGCCGCGGATaGGGTCGGAAAGAGGGTCTAGAGGAGGGTGGGAAG +
Preference number: 6 (lower is better)
Translates to: AGNWDSRDRGRG*GRKEGLEEGGK
Trigger: CTTCCCACCCTCCTCTAGACCCTCTTTCCGACCGCATCCGCGGCCCCTGTCCCTTGAGTCCCAATTCCCCGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547588.6
CDS CCA 72 bp TCCTCTACGCTGGTGTCGAGCGGCCCGTGTCGCGCATaGGCCAAAAGCAGGAGAACGGTAGCCACGTCCTGG +
Preference number: 6 (lower is better)
Translates to: SSTLVSSGPCRA*AKSRRTVATSW
Trigger: CCAGGACGTGGCTACCGTTCTCCTGCTTTTGGCCCATGCGCGACACGGGCCGCTCGACACCAGCGTAGAGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257897.7
ENST00000328568.9
ENST00000547588.6
CDS CAA 72 bp GAGGGGCCAAAGGCAGAGATGGCCCTCGGGGGCCGCTaGCCCGGGACTTTGACTGTTGTTCGCAGCAAGTCC +
Preference number: 6 (lower is better)
Translates to: EGPKAEMALGGR*PGTLTVVRSKS
Trigger: GGACTTGCTGCGAACAACAGTCAAAGTCCCGGGCAAGCGGCCCCCGAGGGCCATCTCTGCCTTTGGCCCCTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257897.7
ENST00000328568.9
ENST00000547588.6
ENST00000549129.1
CDS TCA 72 bp AGTGCTCATGTCCTTGACGAGCCCGTTAATGCTGGCTaGGGGGCCAAAGGCAGAGATGGCCCTCGGGGGCCG +
Preference number: 6 (lower is better)
Translates to: SAHVLDEPVNAG*GAKGRDGPRGP
Trigger: CGGCCCCCGAGGGCCATCTCTGCCTTTGGCCCCTCAGCCAGCATTAACGGGCTCGTCAAGGACATGAGCACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000257897.7
ENST00000328568.9
ENST00000547588.6
ENST00000549129.1
CDS GCA 72 bp TTCGCAAAAAGGCTGGTCCTGCGCTTGGCTGCCCGGTaGAGGGACCCTGGGGTGCTCAATCCAGCCACTGCA +
Preference number: 6 (lower is better)
Translates to: FAKRLVLRLAAR*RDPGVLNPATA
Trigger: TGCAGTGGCTGGATTGAGCACCCCAGGGTCCCTGCACCGGGCAGCCAAGCGCAGGACCAGCCTTTTTGCGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000257897.7
ENST00000328568.9
ENST00000547588.6
CDS CAA 90 bp ACCGGAGTGGATGCAGCTGAGTGGCTTGGGGAGCTGGGCAGGGACTaGCAGGCAGCCAGAAGCTGTTGCTGCTTGCGCAAGGTCACCACC +
Preference number: 6 (lower is better)
Translates to: TGVDAAEWLGELGRD*QAARSCCCLRKVTT
Trigger: GGTGGTGACCTTGCGCAAGCAGCAACAGCTTCTGGCTGCCTGCAAGTCCCTGCCCAGCTCCCCAAGCCACTCAGCTGCATCCACTCCGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257897.7
ENST00000328568.9
ENST00000547588.6
CDS CAA 90 bp GCAGGCGGTCCCGGATGCAAGTCACTGTTGTCCAAGGTCTTACTCTaGCCTTTCCGAGGGGACAACTTCCCTCGGGCTCCAGCCCCAGCC +
Preference number: 6 (lower is better)
Translates to: AGGPGCKSLLSKVLL*PFRGDNFPRAPAPA
Trigger: GGCTGGGGCTGGAGCCCGAGGGAAGTTGTCCCCTCGGAAAGGCAAGAGTAAGACCTTGGACAACAGTGACTTGCATCCGGGACCGCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328568.9
ENST00000547588.6
CDS TCA 72 bp GGAGTTCGGGGTCGTCCACCCTCTCTGCCAGCTTCCTaGGGCGGTTTAGAGCCTGCTTGGCCACCTCATGTC +
Preference number: 6 (lower is better)
Translates to: GVRGRPPSLPAS*GGLEPAWPPHV
Trigger: GACATGAGGTGGCCAAGCAGGCTCTAAACCGCCTCAGGAAGCTGGCAGAGAGGGTGGACGACCCCGAACTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS CCA 72 bp AGTAGCTGCAGCGTTTCATGTCCGCGCACAGAGCTCTaGCACGAGCATCTCCCACCACCCGAGGGGAGGAAG +
Preference number: 6 (lower is better)
Translates to: SSCSVSCPRTEL*HEHLPPPEGRK
Trigger: CTTCCTCCCCTCGGGTGGTGGGAGATGCTCGTGCCAGAGCTCTGTGCGCGGACATGAAACGCTGCAGCTACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257897.7
ENST00000328568.9
ENST00000547588.6
CDS TCA 72 bp GACCTGTCTTGCCAGGCTAACAACCACCTCTGGCCCTaGGGCCCATGGCCCTACAGCCCCCAAACCTCAGAA +
Preference number: 6 (lower is better)
Translates to: DLSCQANNHLWP*GPWPYSPQTSE
Trigger: TTCTGAGGTTTGGGGGCTGTAGGGCCATGGGCCTCAGGGCCAGAGGTGGTTGTTAGCCTGGCAAGACAGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS TCA 72 bp TGCCTCGGCTCGGAGCTCCCGGTGACCAACATTCGGTaGGGACGGGAGGGAAGAAGAGTAGTCGCTAGTGTG +
Preference number: 6 (lower is better)
Translates to: CLGSELPVTNIR*GREGRRVVASV
Trigger: CACACTAGCGACTACTCTTCTTCCCTCCCGTCCTCACCGAATGTTGGTCACCGGGAGCTCCGAGCCGAGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257897.7
ENST00000328568.9
ENST00000547588.6
CDS TCA 72 bp GACAGCAGATGGAAGGTCATCCCCACTGACCCGTGCTaGGGGCTCGGGCCAAATTCCGGTCTGGCTTCAGCA +
Preference number: 6 (lower is better)
Translates to: DSRWKVIPTDPC*GLGPNSGLASA
Trigger: TGCTGAAGCCAGACCGGAATTTGGCCCGAGCCCTCAGCACGGGTCAGTGGGGATGACCTTCCATCTGCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549129.1
CDS CAA 90 bp AGCGGAGGAGGAGAGCCGGCAGGCGGTCCCGGATGCAAGTCACTGTaGTCCAAGGTCTTACTCTTGCCTTTCCGAGGGGACAACTTCCCT +
Preference number: 6 (lower is better)
Translates to: SGGGEPAGGPGCKSL*SKVLLLPFRGDNFP
Trigger: AGGGAAGTTGTCCCCTCGGAAAGGCAAGAGTAAGACCTTGGACAACAGTGACTTGCATCCGGGACCGCCTGCCGGCTCTCCTCCTCCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328568.9
ENST00000547588.6
CDS TCA 72 bp CCAGCACCTGGTATGAGCCAGTCAGGAATCGGTGGATaGGCGATGACTTCCCACTCCTGGCATCGCCCAGCA +
Preference number: 6 (lower is better)
Translates to: PAPGMSQSGIGG*AMTSHSWHRPA
Trigger: TGCTGGGCGATGCCAGGAGTGGGAAGTCATCGCTCATCCACCGATTCCTGACTGGCTCATACCAGGTGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257897.7
ENST00000328568.9
ENST00000547588.6
CDS CCA 72 bp TCTCGAATGCTGTCCAATGAGGCCTGGATGCTGTCCTaGAGTTCGGGGTCGTCCACCCTCTCTGCCAGCTTC +
Preference number: 6 (lower is better)
Translates to: SRMLSNEAWMLS*SSGSSTLSASF
Trigger: GAAGCTGGCAGAGAGGGTGGACGACCCCGAACTCCAGGACAGCATCCAGGCCTCATTGGACAGCATTCGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS CAA 90 bp GTAGTGGCTTCCAGGCCTTCACCCATCTGGACAGTGCTCATGTCCTaGACGAGCCCGTTAATGCTGGCTGAGGGGCCAAAGGCAGAGATG +
Preference number: 6 (lower is better)
Translates to: VVASRPSPIWTVLMS*TSPLMLAEGPKAEM
Trigger: CATCTCTGCCTTTGGCCCCTCAGCCAGCATTAACGGGCTCGTCAAGGACATGAGCACTGTCCAGATGGGTGAAGGCCTGGAAGCCACTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257897.7
ENST00000328568.9
ENST00000547588.6
ENST00000549129.1
CDS CCA 72 bp TTCTCCAGCACCTGGTATGAGCCAGTCAGGAATCGGTaGATGAGCGATGACTTCCCACTCCTGGCATCGCCC +
Preference number: 6 (lower is better)
Translates to: FSSTWYEPVRNR*MSDDFPLLASP
Trigger: GGGCGATGCCAGGAGTGGGAAGTCATCGCTCATCCACCGATTCCTGACTGGCTCATACCAGGTGCTGGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257897.7
ENST00000328568.9
ENST00000547588.6
CDS CCA 72 bp CTCGGGCCAAATTCCGGTCTGGCTTCAGCAGGTGTTTaGATGTCTGATCTGGTGGTGGCTGCAGGGAACTGG +
Preference number: 6 (lower is better)
Translates to: LGPNSGLASAGV*MSDLVVAAGNW
Trigger: CCAGTTCCCTGCAGCCACCACCAGATCAGACATCCAAACACCTGCTGAAGCCAGACCGGAATTTGGCCCGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257897.7
ENST00000328568.9
ENST00000547588.6
ENST00000549129.1
CDS CAA 72 bp TCCAGGCCTTCACCCATCTGGACAGTGCTCATGTCCTaGACGAGCCCGTTAATGCTGGCTGAGGGGCCAAAG +
Preference number: 6 (lower is better)
Translates to: SRPSPIWTVLMS*TSPLMLAEGPK
Trigger: CTTTGGCCCCTCAGCCAGCATTAACGGGCTCGTCAAGGACATGAGCACTGTCCAGATGGGTGAAGGCCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257897.7
ENST00000328568.9
ENST00000547588.6
ENST00000549129.1
CDS TCA 72 bp CTGGCTATTGATCACAGCCTCTCGAATGCTGTCCAATaGGGCCTGGATGCTGTCCTGGAGTTCGGGGTCGTC +
Preference number: 6 (lower is better)
Translates to: LAIDHSLSNAVQ*GLDAVLEFGVV
Trigger: GACGACCCCGAACTCCAGGACAGCATCCAGGCCTCATTGGACAGCATTCGAGAGGCTGTGATCAATAGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS GCA 72 bp CTGCAGCTACAACGAACTGCCTCTGGGCATGCATGTTaGCCAGACCTGTCTTGCCAGGCTAACAACCACCTC +
Preference number: 6 (lower is better)
Translates to: LQLQRTASGHAC*PDLSCQANNHL
Trigger: GAGGTGGTTGTTAGCCTGGCAAGACAGGTCTGGGCAACATGCATGCCCAGAGGCAGTTCGTTGTAGCTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS GCA 72 bp CCGGATGCAAGTCACTGTTGTCCAAGGTCTTACTCTTaGCTTTCCGAGGGGACAACTTCCCTCGGGCTCCAG +
Preference number: 6 (lower is better)
Translates to: PDASHCCPRSYS*LSEGTTSLGLQ
Trigger: CTGGAGCCCGAGGGAAGTTGTCCCCTCGGAAAGGCAAGAGTAAGACCTTGGACAACAGTGACTTGCATCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328568.9
ENST00000547588.6
CDS CCA 72 bp ACTTCTGCTCTCACTGCAGCTACAACGAACTGCCTCTaGGCATGCATGTTGCCCAGACCTGTCTTGCCAGGC +
Preference number: 6 (lower is better)
Translates to: TSALTAATTNCL*ACMLPRPVLPG
Trigger: GCCTGGCAAGACAGGTCTGGGCAACATGCATGCCCAGAGGCAGTTCGTTGTAGCTGCAGTGAGAGCAGAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS CCA 72 bp CGCAGTTCAGGAATGGAGCGGCTCAAAGTCCATTCCTaGCTATTGATCACAGCCTTAGGGGAAGCGCGGAGC +
Preference number: 6 (lower is better)
Translates to: RSSGMERLKVHS*LLITALGEARS
Trigger: GCTCCGCGCTTCCCCTAAGGCTGTGATCAATAGCCAGGAATGGACTTTGAGCCGCTCCATTCCTGAACTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328568.9
ENST00000547588.6
CDS CAA 72 bp CCCGGATGCAAGTCACTGTTGTCCAAGGTCTTACTCTaGCCTTTCCGAGGGGACAACTTCCCTCGGGCTCCA +
Preference number: 6 (lower is better)
Translates to: PGCKSLLSKVLL*PFRGDNFPRAP
Trigger: TGGAGCCCGAGGGAAGTTGTCCCCTCGGAAAGGCAAGAGTAAGACCTTGGACAACAGTGACTTGCATCCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328568.9
ENST00000547588.6
CDS CAA 72 bp CCTCCTGTGCTCTTGGTGAAGATGCCGCTGATAAACTaGAGCATCTTGCGGTCACGAGTGGATGCTCGGCCC +
Preference number: 6 (lower is better)
Translates to: PPVLLVKMPLIN*SILRSRVDARP
Trigger: GGGCCGAGCATCCACTCGTGACCGCAAGATGCTCAAGTTTATCAGCGGCATCTTCACCAAGAGCACAGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328568.9
ENST00000547588.6
CDS GCA 72 bp CGTCTGACTTCTGCTCTCACTGCAGCTACAACGAACTaGCTCTGGGCATGCATGTTGCCCAGACCTGTCTTG +
Preference number: 6 (lower is better)
Translates to: RLTSALTAATTN*LWACMLPRPVL
Trigger: CAAGACAGGTCTGGGCAACATGCATGCCCAGAGGCAGTTCGTTGTAGCTGCAGTGAGAGCAGAAGTCAGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS GCA 72 bp CTTGGCCACCTCATGTCGTCTGACTTCTGCTCTCACTaGAGCTACAACGAACTGCCTCTGGGCATGCATGTT +
Preference number: 6 (lower is better)
Translates to: LGHLMSSDFCSH*SYNELPLGMHV
Trigger: AACATGCATGCCCAGAGGCAGTTCGTTGTAGCTGCAGTGAGAGCAGAAGTCAGACGACATGAGGTGGCCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS CAA 90 bp GCCTCCAAGCCTTCACCCCATATTCATTTCCCACACTCATCCTATTaGGGTGTGGAAGACAGCAGATGGAAGGTCATCCCCACTGACCCG +
Preference number: 6 (lower is better)
Translates to: ASKPSPHIHFPHSSY*GVEDSRWKVIPTDP
Trigger: CGGGTCAGTGGGGATGACCTTCCATCTGCTGTCTTCCACACCCAAATAGGATGAGTGTGGGAAATGAATATGGGGTGAAGGCTTGGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549129.1
CDS CCA 72 bp CGCAGTTCAGGAATGGAGCGGCTCAAAGTCCATTCCTaGCTATTGATCACAGCCTCTCGAATGCTGTCCAAT +
Preference number: 6 (lower is better)
Translates to: RSSGMERLKVHS*LLITASRMLSN
Trigger: ATTGGACAGCATTCGAGAGGCTGTGATCAATAGCCAGGAATGGACTTTGAGCCGCTCCATTCCTGAACTGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257897.7
CDS CAA 72 bp CCTTCACCCCATATTCATTTCCCACACTCATCCTATTaGGGTGTGGAAGACAGCAGATGGAAGGTCATCCCC +
Preference number: 6 (lower is better)
Translates to: PSPHIHFPHSSY*GVEDSRWKVIP
Trigger: GGGGATGACCTTCCATCTGCTGTCTTCCACACCCAAATAGGATGAGTGTGGGAAATGAATATGGGGTGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549129.1