RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADAM12 (Homo sapiens)

Ensembl gene IDs: ENSG00000148848

Ensembl transcript IDs: ENST00000368676.8, ENST00000368679.8, ENST00000448723.2, ENST00000467145.1, ENST00000482291.1, ENST00000485388.2, ENST00000494661.1

Found 689 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCTCTGCTGGACTTAGGCTGGTGGGGTTGCTCTGGGCTGCAGCCCTaGAGAAGGTTGGGCTTTGGGCATCCCTTGGGTGGGCCTTGTAGG +
Preference number: 1 (lower is better)
Translates to: PLLDLGWWGCSGLQP*RRLGFGHPLGGPCR
Trigger: CCTACAAGGCCCACCCAAGGGATGCCCAAAGCCCAACCTTCTCCAGGGCTGCAGCCCAGAGCAACCCCACCAGCCTAAGTCCAGCAGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR GCA 90 bp AGACATTGGGTGGGAGGTCCTCTGCTGGACTTAGGCTGGTGGGGTTaGTCTGGGCTGCAGCCCTGGAGAAGGTTGGGCTTTGGGCATCCC +
Preference number: 1 (lower is better)
Translates to: RHWVGGPLLDLGWWG*SGLQPWRRLGFGHP
Trigger: GGGATGCCCAAAGCCCAACCTTCTCCAGGGCTGCAGCCCAGAGCAACCCCACCAGCCTAAGTCCAGCAGAGGACCTCCCACCCAATGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR CCA 90 bp CGATGGCAAAGCCACAGAGTCAATGCTGCCAGTCACAGGAGGCCTTaGGGACGCGTGACCTCCTCTGCAGCAGCACTGGTCACGGTCTCC +
Preference number: 1 (lower is better)
Translates to: RWQSHRVNAASHRRP*GRVTSSAAALVTVS
Trigger: GGAGACCGTGACCAGTGCTGCTGCAGAGGAGGTCACGCGTCCCCAAGGCCTCCTGTGACTGGCAGCATTGACTCTGTGGCTTTGCCATCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368676.8
3UTR TCA 90 bp ACTGGGCCCAACCCTTGCTTCTCCCCCACTGCTGTGGAGGCTCAGTaGAAGGCCAGACTTTTGAGTCCTCTTCCTCCTTGCTGCAGGGCT +
Preference number: 1 (lower is better)
Translates to: TGPNPCFSPTAVEAQ*KARLLSPLPPCCRA
Trigger: AGCCCTGCAGCAAGGAGGAAGAGGACTCAAAAGTCTGGCCTTTCACTGAGCCTCCACAGCAGTGGGGGAGAAGCAAGGGTTGGGCCCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368676.8
3UTR GCA 90 bp TCAACCAGGAAGTCGCTGCCCTTCCTTGCACTGTTTCTGCAGACGTaGCTGGTAGGCTGGACTTCCCCTCCTGAGCCCCGAGAACTGTGT +
Preference number: 1 (lower is better)
Translates to: STRKSLPFLALFLQT*LVGWTSPPEPRELC
Trigger: ACACAGTTCTCGGGGCTCAGGAGGGGAAGTCCAGCCTACCAGGCACGTCTGCAGAAACAGTGCAAGGAAGGGCAGCGACTTCCTGGTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368676.8
3UTR GCA 90 bp CCACCTTGTGCCCTTTCTGCTGCTGGGGGTCTCATTGGCTCAGAGTaGTTAGTAAACATCAGTGGCGAGGGGGCAGGAGGATGCTCAGCC +
Preference number: 1 (lower is better)
Translates to: PPCALSAAGGLIGSE*LVNISGEGAGGCSA
Trigger: GGCTGAGCATCCTCCTGCCCCCTCGCCACTGATGTTTACTAAGCACTCTGAGCCAATGAGACCCCCAGCAGCAGAAAGGGCACAAGGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR GCA 90 bp AGGTGCATGAGAAAGATCTGGCCCTGCTGCCCTGGCGCCACCTTGTaGCCTTTCTGCTGCTGGGGGTCTCATTGGCTCAGAGTGCTTAGT +
Preference number: 1 (lower is better)
Translates to: RCMRKIWPCCPGATL*PFCCWGSHWLRVLS
Trigger: ACTAAGCACTCTGAGCCAATGAGACCCCCAGCAGCAGAAAGGGCACAAGGTGGCGCCAGGGCAGCAGGGCCAGATCTTTCTCATGCACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR GCA 90 bp AAAGTCTGCAAGAGGTCGAGGTGCATGAGAAAGATCTGGCCCTGCTaGCCTGGCGCCACCTTGTGCCCTTTCTGCTGCTGGGGGTCTCAT +
Preference number: 1 (lower is better)
Translates to: KVCKRSRCMRKIWPC*PGATLCPFCCWGSH
Trigger: ATGAGACCCCCAGCAGCAGAAAGGGCACAAGGTGGCGCCAGGGCAGCAGGGCCAGATCTTTCTCATGCACCTCGACCTCTTGCAGACTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR GCA 90 bp AAGAAAGTCTGCAAGAGGTCGAGGTGCATGAGAAAGATCTGGCCCTaGTGCCCTGGCGCCACCTTGTGCCCTTTCTGCTGCTGGGGGTCT +
Preference number: 1 (lower is better)
Translates to: KKVCKRSRCMRKIWP*CPGATLCPFCCWGS
Trigger: AGACCCCCAGCAGCAGAAAGGGCACAAGGTGGCGCCAGGGCAGCAGGGCCAGATCTTTCTCATGCACCTCGACCTCTTGCAGACTTTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR CCA 90 bp ATCTGGCCCTGCTGCCCTGGCGCCACCTTGTGCCCTTTCTGCTGCTaGGGGTCTCATTGGCTCAGAGTGCTTAGTAAACATCAGTGGCGA +
Preference number: 1 (lower is better)
Translates to: IWPCCPGATLCPFCC*GSHWLRVLSKHQWR
Trigger: TCGCCACTGATGTTTACTAAGCACTCTGAGCCAATGAGACCCCCAGCAGCAGAAAGGGCACAAGGTGGCGCCAGGGCAGCAGGGCCAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR CCA 90 bp CTCACGAAGAAAGTCTGCAAGAGGTCGAGGTGCATGAGAAAGATCTaGCCCTGCTGCCCTGGCGCCACCTTGTGCCCTTTCTGCTGCTGG +
Preference number: 1 (lower is better)
Translates to: LTKKVCKRSRCMRKI*PCCPGATLCPFCCW
Trigger: CCAGCAGCAGAAAGGGCACAAGGTGGCGCCAGGGCAGCAGGGCCAGATCTTTCTCATGCACCTCGACCTCTTGCAGACTTTCTTCGTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR TCA 90 bp AGCATTAAGTTGCAGCCAGAGACCAGTCATCAGGGCTGCCAAGGCTaGGGTGTCACTGGGGAAAGGGGACACTGGGCCCAACCCTTGCTT +
Preference number: 1 (lower is better)
Translates to: SIKLQPETSHQGCQG*GVTGERGHWAQPLL
Trigger: AAGCAAGGGTTGGGCCCAGTGTCCCCTTTCCCCAGTGACACCTCAGCCTTGGCAGCCCTGATGACTGGTCTCTGGCTGCAACTTAATGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368676.8
3UTR GCA 90 bp AAGATCTGGCCCTGCTGCCCTGGCGCCACCTTGTGCCCTTTCTGCTaGTGGGGGTCTCATTGGCTCAGAGTGCTTAGTAAACATCAGTGG +
Preference number: 1 (lower is better)
Translates to: KIWPCCPGATLCPFC*WGSHWLRVLSKHQW
Trigger: CCACTGATGTTTACTAAGCACTCTGAGCCAATGAGACCCCCAGCAGCAGAAAGGGCACAAGGTGGCGCCAGGGCAGCAGGGCCAGATCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR CCA 90 bp TCGCTGCCCTTCCTTGCACTGTTTCTGCAGACGTGCCTGGTAGGCTaGACTTCCCCTCCTGAGCCCCGAGAACTGTGTTGTGTCTGTTGT +
Preference number: 1 (lower is better)
Translates to: SLPFLALFLQTCLVG*TSPPEPRELCCVCC
Trigger: ACAACAGACACAACACAGTTCTCGGGGCTCAGGAGGGGAAGTCCAGCCTACCAGGCACGTCTGCAGAAACAGTGCAAGGAAGGGCAGCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368676.8
3UTR TCA 90 bp GCAATGTCCCCCAGCAGCCTGTCATTGTGTGTGAAACTCCTAGCCTaGGAGCCCCACCTCTGGTCAGCACTAGTGTTGGGAGACTTCTGG +
Preference number: 1 (lower is better)
Translates to: AMSPSSLSLCVKLLA*EPHLWSALVLGDFW
Trigger: CCAGAAGTCTCCCAACACTAGTGCTGACCAGAGGTGGGGCTCTCAGGCTAGGAGTTTCACACACAATGACAGGCTGCTGGGGGACATTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR GCA 90 bp GTTGTGTCTGTTGTCATGGAAACGATGGCAAAGCCACAGAGTCAATaGTGCCAGTCACAGGAGGCCTTGGGGACGCGTGACCTCCTCTGC +
Preference number: 1 (lower is better)
Translates to: VVSVVMETMAKPQSQ*CQSQEALGTRDLLC
Trigger: GCAGAGGAGGTCACGCGTCCCCAAGGCCTCCTGTGACTGGCAGCATTGACTCTGTGGCTTTGCCATCGTTTCCATGACAACAGACACAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368676.8
3UTR GCA 90 bp CTCTGTGGGTTCCCTGGCTTTCTGCAAACCCTCAAACCTGAGTACTaGTGGTCACGCATGTCCACAGCAAAGAGCCAGAGTTCACCGCCC +
Preference number: 1 (lower is better)
Translates to: LCGFPGFLQTLKPEY*WSRMSTAKSQSSPP
Trigger: GGGCGGTGAACTCTGGCTCTTTGCTGTGGACATGCGTGACCAGCAGTACTCAGGTTTGAGGGTTTGCAGAAAGCCAGGGAACCCACAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368676.8
3UTR GCA 90 bp AGAAAGATCTGGCCCTGCTGCCCTGGCGCCACCTTGTGCCCTTTCTaGTGCTGGGGGTCTCATTGGCTCAGAGTGCTTAGTAAACATCAG +
Preference number: 1 (lower is better)
Translates to: RKIWPCCPGATLCPF*CWGSHWLRVLSKHQ
Trigger: CTGATGTTTACTAAGCACTCTGAGCCAATGAGACCCCCAGCAGCAGAAAGGGCACAAGGTGGCGCCAGGGCAGCAGGGCCAGATCTTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR TCA 90 bp TGCACTGTTTCTGCAGACGTGCCTGGTAGGCTGGACTTCCCCTCCTaGGCCCCGAGAACTGTGTTGTGTCTGTTGTCATGGAAACGATGG +
Preference number: 1 (lower is better)
Translates to: CTVSADVPGRLDFPS*APRTVLCLLSWKRW
Trigger: CCATCGTTTCCATGACAACAGACACAACACAGTTCTCGGGGCTCAGGAGGGGAAGTCCAGCCTACCAGGCACGTCTGCAGAAACAGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368676.8
3UTR CCA 90 bp TGTGGGTTCCCTGGCTTTCTGCAAACCCTCAAACCTGAGTACTGCTaGTCACGCATGTCCACAGCAAAGAGCCAGAGTTCACCGCCCTTT +
Preference number: 1 (lower is better)
Translates to: CGFPGFLQTLKPEYC*SRMSTAKSQSSPPF
Trigger: AAAGGGCGGTGAACTCTGGCTCTTTGCTGTGGACATGCGTGACCAGCAGTACTCAGGTTTGAGGGTTTGCAGAAAGCCAGGGAACCCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368676.8
3UTR CCA 90 bp TGTTGGGAGACTTCTGGGAGGGATTGTGACTTTCAGCTGGGTAACTaGTGTCTGGCTGAGGCCATCTTGAGCGCAGTGAGGAAGGATCTC +
Preference number: 1 (lower is better)
Translates to: CWETSGRDCDFQLGN*CLAEAILSAVRKDL
Trigger: GAGATCCTTCCTCACTGCGCTCAAGATGGCCTCAGCCAGACACCAGTTACCCAGCTGAAAGTCACAATCCCTCCCAGAAGTCTCCCAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR TCA 90 bp TTGGTGACTCTGTGGGTTCCCTGGCTTTCTGCAAACCCTCAAACCTaGGTACTGCTGGTCACGCATGTCCACAGCAAAGAGCCAGAGTTC +
Preference number: 1 (lower is better)
Translates to: LVTLWVPWLSANPQT*VLLVTHVHSKEPEF
Trigger: GAACTCTGGCTCTTTGCTGTGGACATGCGTGACCAGCAGTACTCAGGTTTGAGGGTTTGCAGAAAGCCAGGGAACCCACAGAGTCACCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368676.8
3UTR GCA 90 bp CTATCAAGCACCGCCTTGAGTGACACTACAGACCCCTTCCAAACATaGTCACGGCTGGTCAGCTCAGGGTCAAGTTCTGGCTTGTCTAGT +
Preference number: 1 (lower is better)
Translates to: LSSTALSDTTDPFQT*SRLVSSGSSSGLSS
Trigger: ACTAGACAAGCCAGAACTTGACCCTGAGCTGACCAGCCGTGAGCATGTTTGGAAGGGGTCTGTAGTGTCACTCAAGGCGGTGCTTGATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR GCA 90 bp TGTGGTGATTTGCTCAGCTCCAAGCAGTATAGGGAGGTGGCGGTTTaGAGTGCCTGGGCAGTAGGTTTCTTACAGAAACACCACCTTTCC +
Preference number: 1 (lower is better)
Translates to: CGDLLSSKQYREVAV*SAWAVGFLQKHHLS
Trigger: GGAAAGGTGGTGTTTCTGTAAGAAACCTACTGCCCAGGCACTGCAAACCGCCACCTCCCTATACTGCTTGGAGCTGAGCAAATCACCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR TCA 90 bp CGAGAAAAAGAAGTGCTTGGCATTTCTATCAAGCACCGCCTTGAGTaGCACTACAGACCCCTTCCAAACATGCTCACGGCTGGTCAGCTC +
Preference number: 1 (lower is better)
Translates to: REKEVLGISIKHRLE*HYRPLPNMLTAGQL
Trigger: GAGCTGACCAGCCGTGAGCATGTTTGGAAGGGGTCTGTAGTGTCACTCAAGGCGGTGCTTGATAGAAATGCCAAGCACTTCTTTTTCTCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR CCA 90 bp GCTCAGGGTCAAGTTCTGGCTTGTCTAGTGTTCCAGTCTCTATCCTaGTGTGGCTACACCTTAAGATTCCTGTCTGCAACCCAGGTTCTC +
Preference number: 1 (lower is better)
Translates to: AQGQVLACLVFQSLS*CGYTLRFLSATQVL
Trigger: GAGAACCTGGGTTGCAGACAGGAATCTTAAGGTGTAGCCACACCAGGATAGAGACTGGAACACTAGACAAGCCAGAACTTGACCCTGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR CCA 90 bp TTGCTCAGCTCCAAGCAGTATAGGGAGGTGGCGGTTTGCAGTGCCTaGGCAGTAGGTTTCTTACAGAAACACCACCTTTCCCAAGCTAAA +
Preference number: 1 (lower is better)
Translates to: LLSSKQYREVAVCSA*AVGFLQKHHLSQAK
Trigger: TTTAGCTTGGGAAAGGTGGTGTTTCTGTAAGAAACCTACTGCCCAGGCACTGCAAACCGCCACCTCCCTATACTGCTTGGAGCTGAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR TCA 90 bp ACAGCGAGAAAAAGAAGTGCTTGGCATTTCTATCAAGCACCGCCTTaGGTGACACTACAGACCCCTTCCAAACATGCTCACGGCTGGTCA +
Preference number: 1 (lower is better)
Translates to: TARKRSAWHFYQAPP*VTLQTPSKHAHGWS
Trigger: TGACCAGCCGTGAGCATGTTTGGAAGGGGTCTGTAGTGTCACTCAAGGCGGTGCTTGATAGAAATGCCAAGCACTTCTTTTTCTCGCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR CCA 90 bp GGGTCAAGTTCTGGCTTGTCTAGTGTTCCAGTCTCTATCCTGGTGTaGCTACACCTTAAGATTCCTGTCTGCAACCCAGGTTCTCACCAA +
Preference number: 1 (lower is better)
Translates to: GSSSGLSSVPVSILV*LHLKIPVCNPGSHQ
Trigger: TTGGTGAGAACCTGGGTTGCAGACAGGAATCTTAAGGTGTAGCCACACCAGGATAGAGACTGGAACACTAGACAAGCCAGAACTTGACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR TCA 90 bp AGTAGTGATTTGACTGTCAAACTGGAGATGCATCGGCCTGTGGTTTaGCCTGGGAAAGGGGCTTGTGTCTGGGTGATAGGGAAAGGTAAA +
Preference number: 1 (lower is better)
Translates to: SSDLTVKLEMHRPVV*PGKGACVWVIGKGK
Trigger: TTTACCTTTCCCTATCACCCAGACACAAGCCCCTTTCCCAGGTCAAACCACAGGCCGATGCATCTCCAGTTTGACAGTCAAATCACTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR CCA 90 bp AAAATCCACGCTGTGAAATGTAACCTCCTGTGTGTATTTCCACAATaGAGAATGTTAGGCTTCGTTTCCCTCGGTTGCTACACATCTGAT +
Preference number: 1 (lower is better)
Translates to: KIHAVKCNLLCVFPQ*RMLGFVSLGCYTSD
Trigger: ATCAGATGTGTAGCAACCGAGGGAAACGAAGCCTAACATTCTCCATTGTGGAAATACACACAGGAGGTTACATTTCACAGCGTGGATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR CCA 90 bp AAGAATGTGTCATCAGCCATGGCCCCTAAGTGGCCATTGATGACATaGCATAAGATCACAGTTTTAACCTCCTTTAATATCAAACTCTCC +
Preference number: 1 (lower is better)
Translates to: KNVSSAMAPKWPLMT*HKITVLTSFNIKLS
Trigger: GGAGAGTTTGATATTAAAGGAGGTTAAAACTGTGATCTTATGCCATGTCATCAATGGCCACTTAGGGGCCATGGCTGATGACACATTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR TCA 90 bp AAAATTTCAGGAGACAAACCTTTCAGCGGAATTGCCTGGAACCCATaGAGTGAGGTCATAGAACCTACAACTATAATAAGCTGTAGGAAG +
Preference number: 1 (lower is better)
Translates to: KISGDKPFSGIAWNP*SEVIEPTTIISCRK
Trigger: CTTCCTACAGCTTATTATAGTTGTAGGTTCTATGACCTCACTTCATGGGTTCCAGGCAATTCCGCTGAAAGGTTTGTCTCCTGAAATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR TCA 90 bp ACACTCAGAGTGAATTATGTAACTGTTGTCAATTGTCTTCTAATGTaGAAACCAGTCCAGAAGACAGAGGCATCATGGCATTTTACCTTA +
Preference number: 1 (lower is better)
Translates to: TLRVNYVTVVNCLLM*KPVQKTEASWHFTL
Trigger: TAAGGTAAAATGCCATGATGCCTCTGTCTTCTGGACTGGTTTTCACATTAGAAGACAATTGACAACAGTTACATAATTCACTCTGAGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR TCA 90 bp TGCCTAATTGTTAATAAGTTGAACCTTGCAGTAAACAGACTTGATTaGCTAGATCTGGTTAATGGTTCACATCTGAAAATAGTTGTGGTC +
Preference number: 1 (lower is better)
Translates to: CLIVNKLNLAVNRLD*LDLVNGSHLKIVVV
Trigger: GACCACAACTATTTTCAGATGTGAACCATTAACCAGATCTAGTCAATCAAGTCTGTTTACTGCAAGGTTCAACTTATTAACAATTAGGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR TCA 90 bp TGTCCAATATCTACGAATAATGATAGCAGACATGAACTATACCCATaGACATCACATTCCATTGGTTGTAGTTTTTGCAAGCATAAAGAG +
Preference number: 1 (lower is better)
Translates to: CPISTNNDSRHELYP*TSHSIGCSFCKHKE
Trigger: CTCTTTATGCTTGCAAAAACTACAACCAATGGAATGTGATGTTCATGGGTATAGTTCATGTCTGCTATCATTATTCGTAGATATTGGACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR CAA 90 bp GCTGGTGGGGTTGCTCTGGGCTGCAGCCCTGGAGAAGGTTGGGCTTaGGGCATCCCTTGGGTGGGCCTTGTAGGGATAGCCACACACTGC +
Preference number: 2 (lower is better)
Translates to: AGGVALGCSPGEGWA*GIPWVGLVGIATHC
Trigger: GCAGTGTGTGGCTATCCCTACAAGGCCCACCCAAGGGATGCCCAAAGCCCAACCTTCTCCAGGGCTGCAGCCCAGAGCAACCCCACCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR-3UTR CCA 90 bp CTGGCGCCACCTTGTGCCCTTTCTGCTGCTGGGGGTCTCATTGGCTCAGAGTGCGGACCTGAAGCCCCTTaGCTCTGGCCTGAGATGGGG +
Preference number: 2 (lower is better)
Translates to: LAPPCALSAAGGLIGSECGPEAP*LWPEMG
Trigger: CCCCATCTCAGGCCAGAGCCAAGGGGCTTCAGGTCC...GCACTCTGAGCCAATGAGACCCCCAGCAGCAGAAAGGGCACAAGGTGGCGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR CAA 90 bp ACGATGGCAAAGCCACAGAGTCAATGCTGCCAGTCACAGGAGGCCTaGGGGACGCGTGACCTCCTCTGCAGCAGCACTGGTCACGGTCTC +
Preference number: 2 (lower is better)
Translates to: TMAKPQSQCCQSQEA*GTRDLLCSSTGHGL
Trigger: GAGACCGTGACCAGTGCTGCTGCAGAGGAGGTCACGCGTCCCCAAGGCCTCCTGTGACTGGCAGCATTGACTCTGTGGCTTTGCCATCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368676.8
3UTR CAA 90 bp AAGACATTGGGTGGGAGGTCCTCTGCTGGACTTAGGCTGGTGGGGTaGCTCTGGGCTGCAGCCCTGGAGAAGGTTGGGCTTTGGGCATCC +
Preference number: 2 (lower is better)
Translates to: KTLGGRSSAGLRLVG*LWAAALEKVGLWAS
Trigger: GGATGCCCAAAGCCCAACCTTCTCCAGGGCTGCAGCCCAGAGCAACCCCACCAGCCTAAGTCCAGCAGAGGACCTCCCACCCAATGTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR CAA 90 bp TCGAGGTGCATGAGAAAGATCTGGCCCTGCTGCCCTGGCGCCACCTaGTGCCCTTTCTGCTGCTGGGGGTCTCATTGGCTCAGAGTGCTT +
Preference number: 2 (lower is better)
Translates to: SRCMRKIWPCCPGAT*CPFCCWGSHWLRVL
Trigger: AAGCACTCTGAGCCAATGAGACCCCCAGCAGCAGAAAGGGCACAAGGTGGCGCCAGGGCAGCAGGGCCAGATCTTTCTCATGCACCTCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR-3UTR GCA 90 bp CTGGCGCCACCTTGTGCCCTTTCTGCTGCTGGGGGTCTCATTGGCTCAGAGTGCGACCCCTTCCAAACATaGTCACGGCTGGTCAGCTCA +
Preference number: 2 (lower is better)
Translates to: LAPPCALSAAGGLIGSECDPFQT*SRLVSS
Trigger: TGAGCTGACCAGCCGTGAGCATGTTTGGAAGGGGTC...GCACTCTGAGCCAATGAGACCCCCAGCAGCAGAAAGGGCACAAGGTGGCGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR-3UTR TCA 90 bp AATGTCCCCCAGCAGCCTGTCATTGTGTGTGAAACTCCTAGCCTGAGAGCCCCAAACACAGCCTGGACCTaGAGCCCCTTGGCTCTGGCC +
Preference number: 2 (lower is better)
Translates to: NVPQQPVIVCETPSLRAPNTAWT*SPLALA
Trigger: GGCCAGAGCCAAGGGGCTTCAGGTCCAGGCTGTGTT...TGGGGCTCTCAGGCTAGGAGTTTCACACACAATGACAGGCTGCTGGGGGACATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR-3UTR TCA 90 bp TGTGGTGATTTGCTCAGCTCCAAGCAGTATAGGGAGGTGGCGGTTTGCAGTGCCGGCACAGGGCCTCCCTaGAAGCCAAACACAGCCTGG +
Preference number: 2 (lower is better)
Translates to: CGDLLSSKQYREVAVCSAGTGPP*KPNTAW
Trigger: CCAGGCTGTGTTTGGCTTTCAGGGAGGCCCTGTGCC...GGCACTGCAAACCGCCACCTCCCTATACTGCTTGGAGCTGAGCAAATCACCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR-3UTR GCA 90 bp TGTGGTGATTTGCTCAGCTCCAAGCAGTATAGGGAGGTGGCGGTTTGCAGTGCCCCCTGGGAGCCTGCCTaGCAGTTGTCAAGGGGCACA +
Preference number: 2 (lower is better)
Translates to: CGDLLSSKQYREVAVCSAPWEPA*QLSRGT
Trigger: TGTGCCCCTTGACAACTGGCAGGCAGGCTCCCAGGG...GGCACTGCAAACCGCCACCTCCCTATACTGCTTGGAGCTGAGCAAATCACCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR CAA 90 bp GATTGTGACTTTCAGCTGGGTAACTGGTGTCTGGCTGAGGCCATCTaGAGCGCAGTGAGGAAGGATCTCCAGCCTGAGTGTGCCGTGGGC +
Preference number: 2 (lower is better)
Translates to: DCDFQLGNWCLAEAI*SAVRKDLQPECAVG
Trigger: GCCCACGGCACACTCAGGCTGGAGATCCTTCCTCACTGCGCTCAAGATGGCCTCAGCCAGACACCAGTTACCCAGCTGAAAGTCACAATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR-3UTR TCA 90 bp TGTGTCTGTTGTCATGGAAACGATGGCAAAGCCACAGAGTCAATGCTGCCAGTCGGCCTTGGGGACGCGTaGCCTCCTCTGCAGCAGCAC +
Preference number: 2 (lower is better)
Translates to: CVCCHGNDGKATESMLPVGLGDA*PPLQQH
Trigger: GTGCTGCTGCAGAGGAGGTCACGCGTCCCCAAGGCC...GACTGGCAGCATTGACTCTGTGGCTTTGCCATCGTTTCCATGACAACAGACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368676.8
3UTR-3UTR GCA 90 bp CTGGCGCCACCTTGTGCCCTTTCTGCTGCTGGGGGTCTCATTGGCTCAGAGTGCAGTTCAAGGGGATGCTaGCCAAGCCAGCATCTCATA +
Preference number: 2 (lower is better)
Translates to: LAPPCALSAAGGLIGSECSSRGC*PSQHLI
Trigger: TATGAGATGCTGGCTTGGGCAGCATCCCCTTGAACT...GCACTCTGAGCCAATGAGACCCCCAGCAGCAGAAAGGGCACAAGGTGGCGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR-3UTR CCA 90 bp CTGGCGCCACCTTGTGCCCTTTCTGCTGCTGGGGGTCTCATTGGCTCAGAGTGCCTCACCAAAGCTTCCTaGCCAGAAGCCAGATTTCTC +
Preference number: 2 (lower is better)
Translates to: LAPPCALSAAGGLIGSECLTKAS*PEARFL
Trigger: GAGAAATCTGGCTTCTGGCCAGGAAGCTTTGGTGAG...GCACTCTGAGCCAATGAGACCCCCAGCAGCAGAAAGGGCACAAGGTGGCGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR-3UTR CCA 90 bp CTGGCGCCACCTTGTGCCCTTTCTGCTGCTGGGGGTCTCATTGGCTCAGAGTGCAAACATGCTCACGGCTaGTCAGCTCAGGGTCAAGTT +
Preference number: 2 (lower is better)
Translates to: LAPPCALSAAGGLIGSECKHAHG*SAQGQV
Trigger: AACTTGACCCTGAGCTGACCAGCCGTGAGCATGTTT...GCACTCTGAGCCAATGAGACCCCCAGCAGCAGAAAGGGCACAAGGTGGCGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR-3UTR TCA 90 bp GTCCACAGCAAAGAGCCAGAGTTCACCGCCCTTTCTCCTACCTTCTTCTCCAGTCTGGACTTCCCCTCCTaGGCCCCGAGAACTGTGTTG +
Preference number: 2 (lower is better)
Translates to: VHSKEPEFTALSPTFFSSLDFPS*APRTVL
Trigger: CAACACAGTTCTCGGGGCTCAGGAGGGGAAGTCCAG...ACTGGAGAAGAAGGTAGGAGAAAGGGCGGTGAACTCTGGCTCTTTGCTGTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368676.8
3UTR-3UTR GCA 90 bp TCCCTGGCTTTCTGCAAACCCTCAAACCTGAGTACTGCTGGTCACGCATGTCCAACTGGGCCCAACCCTTaGTTCTCCCCCACTGCTGTG +
Preference number: 2 (lower is better)
Translates to: SLAFCKPSNLSTAGHACPTGPNP*FSPTAV
Trigger: CACAGCAGTGGGGGAGAAGCAAGGGTTGGGCCCAGT...TGGACATGCGTGACCAGCAGTACTCAGGTTTGAGGGTTTGCAGAAAGCCAGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368676.8
3UTR-3UTR GCA 90 bp AATGTCCCCCAGCAGCCTGTCATTGTGTGTGAAACTCCTAGCCTGAGAGCCCCAGGTGGCGGTTTGCAGTaGCTGGGCAGTAGGTTTCTT +
Preference number: 2 (lower is better)
Translates to: NVPQQPVIVCETPSLRAPGGGLQ*LGSRFL
Trigger: AAGAAACCTACTGCCCAGGCACTGCAAACCGCCACC...TGGGGCTCTCAGGCTAGGAGTTTCACACACAATGACAGGCTGCTGGGGGACATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR-3UTR CCA 90 bp CCTGCTACTCTCTCAGGAGCAGCACTGAAGCATGTCCATGTTTTAGCAGAAGCTACGTGCCTGGTAGGCTaGACTTCCCCTCCTGAGCCC +
Preference number: 2 (lower is better)
Translates to: PATLSGAALKHVHVLAEATCLVG*TSPPEP
Trigger: GGGCTCAGGAGGGGAAGTCCAGCCTACCAGGCACGT...AGCTTCTGCTAAAACATGGACATGCTTCAGTGCTGCTCCTGAGAGAGTAGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368676.8
3UTR-3UTR CCA 90 bp CTGGCGCCACCTTGTGCCCTTTCTGCTGCTGGGGGTCTCATTGGCTCAGAGTGCTTCCAGTCTCTATCCTaGTGTGGCTACACCTTAAGA +
Preference number: 2 (lower is better)
Translates to: LAPPCALSAAGGLIGSECFQSLS*CGYTLR
Trigger: TCTTAAGGTGTAGCCACACCAGGATAGAGACTGGAA...GCACTCTGAGCCAATGAGACCCCCAGCAGCAGAAAGGGCACAAGGTGGCGCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR-3UTR GCA 90 bp GTCCACAGCAAAGAGCCAGAGTTCACCGCCCTTTCTCCTACCTTCTTCTCCAGTGTCGCTGCCCTTCCTTaGACTGTTTCTGCAGACGTG +
Preference number: 2 (lower is better)
Translates to: VHSKEPEFTALSPTFFSSVAALP*TVSADV
Trigger: CACGTCTGCAGAAACAGTGCAAGGAAGGGCAGCGAC...ACTGGAGAAGAAGGTAGGAGAAAGGGCGGTGAACTCTGGCTCTTTGCTGTGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368676.8
3UTR-3UTR GCA 90 bp AATGTCCCCCAGCAGCCTGTCATTGTGTGTGAAACTCCTAGCCTGAGAGCCCCATGCAAGAGGTCGAGGTaGATGAGAAAGATCTGGCCC +
Preference number: 2 (lower is better)
Translates to: NVPQQPVIVCETPSLRAPCKRSR*MRKIWP
Trigger: GGGCCAGATCTTTCTCATGCACCTCGACCTCTTGCA...TGGGGCTCTCAGGCTAGGAGTTTCACACACAATGACAGGCTGCTGGGGGACATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR-3UTR CCA 90 bp ACTGAAGCATGTCCATGTTTTAGCAGAAGCTCAACCAGGAAGTCGCTGCCCTTCAGTCACAGGAGGCCTTaGGGACGCGTGACCTCCTCT +
Preference number: 2 (lower is better)
Translates to: TEACPCFSRSSTRKSLPFSHRRP*GRVTSS
Trigger: AGAGGAGGTCACGCGTCCCCAAGGCCTCCTGTGACT...GAAGGGCAGCGACTTCCTGGTTGAGCTTCTGCTAAAACATGGACATGCTTCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368676.8
3UTR-3UTR CCA 90 bp CAGCAAAGAGCCAGAGTTCACCGCCCTTTCTCCTACCTTCTTCTCCAGTTTGTTAGGCTGAGGTGTCACTaGGGAAAGGGGACACTGGGC +
Preference number: 2 (lower is better)
Translates to: QQRARVHRPFSYLLLQFVRLRCH*GKGTLG
Trigger: GCCCAGTGTCCCCTTTCCCCAGTGACACCTCAGCCT...AACAAACTGGAGAAGAAGGTAGGAGAAAGGGCGGTGAACTCTGGCTCTTTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368676.8
3UTR-3UTR CCA 90 bp CTGGCGCCACCTTGTGCCCTTTCTGCTGCTGGGGGTCTCATTGGCTCAGAGTGCAAGAAAAGTAGCCTCTaGGCTACTTTGTGTCTAGTC +
Preference number: 2 (lower is better)
Translates to: LAPPCALSAAGGLIGSECKKSSL*ATLCLV
Trigger: GACTAGACACAAAGTAGCCCAGAGGCTACTTTTCTT...GCACTCTGAGCCAATGAGACCCCCAGCAGCAGAAAGGGCACAAGGTGGCGCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR-3UTR CCA 90 bp AATGTCCCCCAGCAGCCTGTCATTGTGTGTGAAACTCCTAGCCTGAGAGCCCCATTTCAGCTGGGTAACTaGTGTCTGGCTGAGGCCATC +
Preference number: 2 (lower is better)
Translates to: NVPQQPVIVCETPSLRAPFQLGN*CLAEAI
Trigger: GATGGCCTCAGCCAGACACCAGTTACCCAGCTGAAA...TGGGGCTCTCAGGCTAGGAGTTTCACACACAATGACAGGCTGCTGGGGGACATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR-3UTR GCA 90 bp TTTCATTGCCATTCAGTTTGCTTGGATGGAGATGGAATGGGTGGCAGGGTCTCTACGCGTGACCTCCTCTaGAGCAGCACTGGTCACGGT +
Preference number: 2 (lower is better)
Translates to: FHCHSVCLDGDGMGGRVSTRDLL*SSTGHG
Trigger: ACCGTGACCAGTGCTGCTGCAGAGGAGGTCACGCGT...AGAGACCCTGCCACCCATTCCATCTCCATCCAAGCAAACTGAATGGCAATGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368676.8
3UTR-3UTR GCA 90 bp CAAACCCTCAAACCTGAGTACTGCTGGTCACGCATGTCCACAGCAAAGAGCCAGTTGCTTCTCCCCCACTaGTGTGGAGGCTCAGTGAAA +
Preference number: 2 (lower is better)
Translates to: QTLKPEYCWSRMSTAKSQLLLPH*CGGSVK
Trigger: TTTCACTGAGCCTCCACAGCAGTGGGGGAGAAGCAA...CTGGCTCTTTGCTGTGGACATGCGTGACCAGCAGTACTCAGGTTTGAGGGTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368676.8
3UTR-3UTR GCA 90 bp CTGAAAGCCAAACACAGCCTGGACCTGAAGCCCCTTGGCTCTGGCCTGAGATGGCACAACAAGCCTTCCTaGCATGGAAAACTCAGTGAT +
Preference number: 2 (lower is better)
Translates to: LKAKHSLDLKPLGSGLRWHNKPS*HGKLSD
Trigger: ATCACTGAGTTTTCCATGGCAGGAAGGCTTGTTGTG...CCATCTCAGGCCAGAGCCAAGGGGCTTCAGGTCCAGGCTGTGTTTGGCTTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR-3UTR CCA 90 bp CTGGCGCCACCTTGTGCCCTTTCTGCTGCTGGGGGTCTCATTGGCTCAGAGTGCAGAAAAAGAAGTGCTTaGCATTTCTATCAAGCACCG +
Preference number: 2 (lower is better)
Translates to: LAPPCALSAAGGLIGSECRKRSA*HFYQAP
Trigger: CGGTGCTTGATAGAAATGCCAAGCACTTCTTTTTCT...GCACTCTGAGCCAATGAGACCCCCAGCAGCAGAAAGGGCACAAGGTGGCGCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR-3UTR CCA 90 bp CTCTCAGGAGCAGCACTGAAGCATGTCCATGTTTTAGCAGAAGCTCAACCAGGACCTCTGCAGCAGCACTaGTCACGGTCTCCATGTCAT +
Preference number: 2 (lower is better)
Translates to: LSGAALKHVHVLAEAQPGPLQQH*SRSPCH
Trigger: ATGACATGGAGACCGTGACCAGTGCTGCTGCAGAGG...TCCTGGTTGAGCTTCTGCTAAAACATGGACATGCTTCAGTGCTGCTCCTGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368676.8
3UTR CAA 90 bp TTCCAAACATGCTCACGGCTGGTCAGCTCAGGGTCAAGTTCTGGCTaGTCTAGTGTTCCAGTCTCTATCCTGGTGTGGCTACACCTTAAG +
Preference number: 2 (lower is better)
Translates to: FQTCSRLVSSGSSSG*SSVPVSILVWLHLK
Trigger: CTTAAGGTGTAGCCACACCAGGATAGAGACTGGAACACTAGACAAGCCAGAACTTGACCCTGAGCTGACCAGCCGTGAGCATGTTTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR CAA 90 bp GACAGCGAGAAAAAGAAGTGCTTGGCATTTCTATCAAGCACCGCCTaGAGTGACACTACAGACCCCTTCCAAACATGCTCACGGCTGGTC +
Preference number: 2 (lower is better)
Translates to: DSEKKKCLAFLSSTA*SDTTDPFQTCSRLV
Trigger: GACCAGCCGTGAGCATGTTTGGAAGGGGTCTGTAGTGTCACTCAAGGCGGTGCTTGATAGAAATGCCAAGCACTTCTTTTTCTCGCTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR-3UTR TCA 90 bp CACAGCAAAGAGCCAGAGTTCACCGCCCTTTCTCCTACCTTCTTCTCCAGTTTGGAAAGGCCAGACTTTTaGGTCCTCTTCCTCCTTGCT +
Preference number: 2 (lower is better)
Translates to: HSKEPEFTALSPTFFSSLERPDF*VLFLLA
Trigger: AGCAAGGAGGAAGAGGACTCAAAAGTCTGGCCTTTC...CAAACTGGAGAAGAAGGTAGGAGAAAGGGCGGTGAACTCTGGCTCTTTGCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368676.8
3UTR-3UTR GCA 90 bp TGTTTCATTGCCATTCAGTTTGCTTGGATGGAGATGGAATGGGTGGCAGGGTCTAAGCCACAGAGTCAATaGTGCCAGTCACAGGAGGCC +
Preference number: 2 (lower is better)
Translates to: CFIAIQFAWMEMEWVAGSKPQSQ*CQSQEA
Trigger: GGCCTCCTGTGACTGGCAGCATTGACTCTGTGGCTT...AGACCCTGCCACCCATTCCATCTCCATCCAAGCAAACTGAATGGCAATGAAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368676.8
3UTR-3UTR GCA 90 bp ATGGTTCTCAGCATGGGGCTCCCAAACTTTCTTAGAGTGTCATTTGTTTTAGTAGAGGATGCTCAGCCCTaGCAGTCGGCCCAGCACCAG +
Preference number: 2 (lower is better)
Translates to: MVLSMGLPNFLRVSFVLVEDAQP*QSAQHQ
Trigger: CTGGTGCTGGGCCGACTGGCAGGGCTGAGCATCCTC...TACTAAAACAAATGACACTCTAAGAAAGTTTGGGAGCCCCATGCTGAGAACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR-3UTR CCA 90 bp TCCCTGGCTTTCTGCAAACCCTCAAACCTGAGTACTGCTGGTCACGCATGTCCAGCCATTCAGTTTGCTTaGATGGAGATGGAATGGGTG +
Preference number: 2 (lower is better)
Translates to: SLAFCKPSNLSTAGHACPAIQFA*MEMEWV
Trigger: CACCCATTCCATCTCCATCCAAGCAAACTGAATGGC...TGGACATGCGTGACCAGCAGTACTCAGGTTTGAGGGTTTGCAGAAAGCCAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368676.8
3UTR-3UTR TCA 90 bp AATGTCCCCCAGCAGCCTGTCATTGTGTGTGAAACTCCTAGCCTGAGAGCCCCACTTTTGTGGTTTCTGTaGTGTCATCCCACATGTGTA +
Preference number: 2 (lower is better)
Translates to: NVPQQPVIVCETPSLRAPLLWFL*CHPTCV
Trigger: TACACATGTGGGATGACATCACAGAAACCACAAAAG...TGGGGCTCTCAGGCTAGGAGTTTCACACACAATGACAGGCTGCTGGGGGACATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR-3UTR GCA 90 bp TGTTTCATTGCCATTCAGTTTGCTTGGATGGAGATGGAATGGGTGGCAGGGTCTCAACCAGGAAGTCGCTaGCCTTCCTTGCACTGTTTC +
Preference number: 2 (lower is better)
Translates to: CFIAIQFAWMEMEWVAGSQPGSR*PSLHCF
Trigger: GAAACAGTGCAAGGAAGGGCAGCGACTTCCTGGTTG...AGACCCTGCCACCCATTCCATCTCCATCCAAGCAAACTGAATGGCAATGAAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368676.8
3UTR-3UTR TCA 90 bp AATGTCCCCCAGCAGCCTGTCATTGTGTGTGAAACTCCTAGCCTGAGAGCCCCAATCCAGAAAATCAACTaGGATTCTACTTGGGATCTC +
Preference number: 2 (lower is better)
Translates to: NVPQQPVIVCETPSLRAPIQKIN*DSTWDL
Trigger: GAGATCCCAAGTAGAATCTCAGTTGATTTTCTGGAT...TGGGGCTCTCAGGCTAGGAGTTTCACACACAATGACAGGCTGCTGGGGGACATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR-3UTR GCA 90 bp GATTCTACTTGGGATCTCTTGAGCTGCATCTGGTACCATAAGCACAGCTGGGGGCCTACTACAGCGCACTaGACTGTAATCAACATTCTG +
Preference number: 2 (lower is better)
Translates to: DSTWDLLSCIWYHKHSWGPTTAH*TVINIL
Trigger: CAGAATGTTGATTACAGTGCAGTGCGCTGTAGTAGG...CCCCCAGCTGTGCTTATGGTACCAGATGCAGCTCAAGAGATCCCAAGTAGAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR-3UTR GCA 90 bp ATCCTGGTGTGGCTACACCTTAAGATTCCTGTCTGCAACCCAGGTTCTCACCAATGGGATCTCTTGAGCTaGATCTGGTACCATAAGCAC +
Preference number: 2 (lower is better)
Translates to: ILVWLHLKIPVCNPGSHQWDLLS*IWYHKH
Trigger: GTGCTTATGGTACCAGATGCAGCTCAAGAGATCCCA...TTGGTGAGAACCTGGGTTGCAGACAGGAATCTTAAGGTGTAGCCACACCAGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR-3UTR GCA 90 bp AATGTCCCCCAGCAGCCTGTCATTGTGTGTGAAACTCCTAGCCTGAGAGCCCCAGCTCAACAGGTAGGTTaGAAGTGTTTAAGAAATAGG +
Preference number: 2 (lower is better)
Translates to: NVPQQPVIVCETPSLRAPAQQVG*KCLRNR
Trigger: CCTATTTCTTAAACACTTGCAACCTACCTGTTGAGC...TGGGGCTCTCAGGCTAGGAGTTTCACACACAATGACAGGCTGCTGGGGGACATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR-3UTR GCA 90 bp AATGTCCCCCAGCAGCCTGTCATTGTGTGTGAAACTCCTAGCCTGAGAGCCCCAACCGGGAAAGTGAAATaGAGTTTTGTTTTCTGGAAG +
Preference number: 2 (lower is better)
Translates to: NVPQQPVIVCETPSLRAPTGKVK*SFVFWK
Trigger: CTTCCAGAAAACAAAACTGCATTTCACTTTCCCGGT...TGGGGCTCTCAGGCTAGGAGTTTCACACACAATGACAGGCTGCTGGGGGACATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR CAA 90 bp AGTCACTTTAAAGACCTTGTGAAACATGGCTCCCTAGTCAGGCATTaGAAGAGTGAAGAGTTCAAGGGGATGCTGCCCAAGCCAGCATCT +
Preference number: 2 (lower is better)
Translates to: SHFKDLVKHGSLVRH*KSEEFKGMLPKPAS
Trigger: AGATGCTGGCTTGGGCAGCATCCCCTTGAACTCTTCACTCTTCAAATGCCTGACTAGGGAGCCATGTTTCACAAGGTCTTTAAAGTGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR-3UTR CCA 90 bp TTTCCAGGTGATGGCCCTACAAAACTCAAACCACCTCTATTATTCATGCCTATAGAAGCCCCTTGGCTCTaGCCTGAGATGGGGAATCCA +
Preference number: 2 (lower is better)
Translates to: FPGDGPTKLKPPLLFMPIEAPWL*PEMGNP
Trigger: TGGATTCCCCATCTCAGGCCAGAGCCAAGGGGCTTC...TATAGGCATGAATAATAGAGGTGGTTTGAGTTTTGTAGGGCCATCACCTGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR-3UTR CCA 90 bp AATGTCCCCCAGCAGCCTGTCATTGTGTGTGAAACTCCTAGCCTGAGAGCCCCATGGCCATTGATGACATaGCATAAGATCACAGTTTTA +
Preference number: 2 (lower is better)
Translates to: NVPQQPVIVCETPSLRAPWPLMT*HKITVL
Trigger: TAAAACTGTGATCTTATGCCATGTCATCAATGGCCA...TGGGGCTCTCAGGCTAGGAGTTTCACACACAATGACAGGCTGCTGGGGGACATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR-3UTR CCA 90 bp AATGTCCCCCAGCAGCCTGTCATTGTGTGTGAAACTCCTAGCCTGAGAGCCCCATGTGTATTTCCACAATaGAGAATGTTAGGCTTCGTT +
Preference number: 2 (lower is better)
Translates to: NVPQQPVIVCETPSLRAPCVFPQ*RMLGFV
Trigger: AACGAAGCCTAACATTCTCCATTGTGGAAATACACA...TGGGGCTCTCAGGCTAGGAGTTTCACACACAATGACAGGCTGCTGGGGGACATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR-3UTR TCA 90 bp TTTCCAGGTGATGGCCCTACAAAACTCAAACCACCTCTATTATTCATGCCTATAAAGCACCGCCTTGAGTaGCACTACAGACCCCTTCCA +
Preference number: 2 (lower is better)
Translates to: FPGDGPTKLKPPLLFMPIKHRLE*HYRPLP
Trigger: TGGAAGGGGTCTGTAGTGTCACTCAAGGCGGTGCTT...TATAGGCATGAATAATAGAGGTGGTTTGAGTTTTGTAGGGCCATCACCTGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR-3UTR TCA 90 bp ATGGTTCTCAGCATGGGGCTCCCAAACTTTCTTAGAGTGTCATTTGTTTTAGTAAGAGGTCGAGGTGCATaGGAAAGATCTGGCCCTGCT +
Preference number: 2 (lower is better)
Translates to: MVLSMGLPNFLRVSFVLVRGRGA*ERSGPA
Trigger: AGCAGGGCCAGATCTTTCTCATGCACCTCGACCTCT...TACTAAAACAAATGACACTCTAAGAAAGTTTGGGAGCCCCATGCTGAGAACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR-3UTR CCA 90 bp TGTTTCATTGCCATTCAGTTTGCTTGGATGGAGATGGAATGGGTGGCAGGGTCTTTGTGTCTGTTGTCATaGAAACGATGGCAAAGCCAC +
Preference number: 2 (lower is better)
Translates to: CFIAIQFAWMEMEWVAGSLCLLS*KRWQSH
Trigger: GTGGCTTTGCCATCGTTTCCATGACAACAGACACAA...AGACCCTGCCACCCATTCCATCTCCATCCAAGCAAACTGAATGGCAATGAAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368676.8
3UTR-3UTR CCA 90 bp CTATTTTATGCAGTAATGGCCACGGGGGATGGAGTTAGGCTCTTACATTGTTTTTTGCTTGGATGGAGATaGAATGGGTGGCAGGGTCTC +
Preference number: 2 (lower is better)
Translates to: LFYAVMATGDGVRLLHCFLLGWR*NGWQGL
Trigger: GAGACCCTGCCACCCATTCCATCTCCATCCAAGCAA...AAAACAATGTAAGAGCCTAACTCCATCCCCCGTGGCCATTACTGCATAAAATAG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000368676.8
3UTR-3UTR CCA 90 bp ATGGTTCTCAGCATGGGGCTCCCAAACTTTCTTAGAGTGTCATTTGTTTTAGTAAGATGCATCGGCCTGTaGTTTGACCTGGGAAAGGGG +
Preference number: 2 (lower is better)
Translates to: MVLSMGLPNFLRVSFVLVRCIGL*FDLGKG
Trigger: CCCCTTTCCCAGGTCAAACCACAGGCCGATGCATCT...TACTAAAACAAATGACACTCTAAGAAAGTTTGGGAGCCCCATGCTGAGAACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR-3UTR GCA 90 bp TTGTTAAATGAAGGGTTGGTGACTCTGTGGGTTCCCTGGCTTTCTGCAAACCCTCATTGCCATTCAGTTTaGTTGGATGGAGATGGAATG +
Preference number: 2 (lower is better)
Translates to: LLNEGLVTLWVPWLSANPHCHSV*LDGDGM
Trigger: CATTCCATCTCCATCCAAGCAAACTGAATGGCAATG...AGGGTTTGCAGAAAGCCAGGGAACCCACAGAGTCACCAACCCTTCATTTAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368676.8
3UTR-3UTR CCA 90 bp TTTCATTGCCATTCAGTTTGCTTGGATGGAGATGGAATGGGTGGCAGGGTCTCTTTGTCATGGAAACGATaGCAAAGCCACAGAGTCAAT +
Preference number: 2 (lower is better)
Translates to: FHCHSVCLDGDGMGGRVSLSWKR*QSHRVN
Trigger: ATTGACTCTGTGGCTTTGCCATCGTTTCCATGACAA...AGAGACCCTGCCACCCATTCCATCTCCATCCAAGCAAACTGAATGGCAATGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368676.8
3UTR-3UTR CCA 90 bp CTATTTTATGCAGTAATGGCCACGGGGGATGGAGTTAGGCTCTTACATTGTTTTAAACCTGAGTACTGCTaGTCACGCATGTCCACAGCA +
Preference number: 2 (lower is better)
Translates to: LFYAVMATGDGVRLLHCFKPEYC*SRMSTA
Trigger: TGCTGTGGACATGCGTGACCAGCAGTACTCAGGTTT...AAAACAATGTAAGAGCCTAACTCCATCCCCCGTGGCCATTACTGCATAAAATAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368676.8
3UTR-3UTR CCA 90 bp TTTCCAGGTGATGGCCCTACAAAACTCAAACCACCTCTATTATTCATGCCTATAGCCATGGCCCCTAAGTaGCCATTGATGACATGGCAT +
Preference number: 2 (lower is better)
Translates to: FPGDGPTKLKPPLLFMPIAMAPK*PLMTWH
Trigger: ATGCCATGTCATCAATGGCCACTTAGGGGCCATGGC...TATAGGCATGAATAATAGAGGTGGTTTGAGTTTTGTAGGGCCATCACCTGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR-3UTR CCA 90 bp ATGGTTCTCAGCATGGGGCTCCCAAACTTTCTTAGAGTGTCATTTGTTTTAGTAGCCACTGGCTTTGTGTaGGCAGCTGTGTTGAATCAG +
Preference number: 2 (lower is better)
Translates to: MVLSMGLPNFLRVSFVLVATGFV*AAVLNQ
Trigger: CTGATTCAACACAGCTGCCCACACAAAGCCAGTGGC...TACTAAAACAAATGACACTCTAAGAAAGTTTGGGAGCCCCATGCTGAGAACCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR CAA 90 bp TGTAGGAAGAAAAGTAGCCTCTGGGCTACTTTGTGTCTAGTCACATaGACTTTCCAGGTGATGGCCCTACAAAACTCAAACCACCTCTAT +
Preference number: 2 (lower is better)
Translates to: CRKKSSLWATLCLVT*TFQVMALQNSNHLY
Trigger: ATAGAGGTGGTTTGAGTTTTGTAGGGCCATCACCTGGAAAGTCAATGTGACTAGACACAAAGTAGCCCAGAGGCTACTTTTCTTCCTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR-3UTR CCA 90 bp TTTCCAGGTGATGGCCCTACAAAACTCAAACCACCTCTATTATTCATGCCTATACTCTTGAGCTGCATCTaGTACCATAAGCACAGCTGG +
Preference number: 2 (lower is better)
Translates to: FPGDGPTKLKPPLLFMPILLSCI*YHKHSW
Trigger: CCAGCTGTGCTTATGGTACCAGATGCAGCTCAAGAG...TATAGGCATGAATAATAGAGGTGGTTTGAGTTTTGTAGGGCCATCACCTGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR-3UTR TCA 90 bp ATGGTTCTCAGCATGGGGCTCCCAAACTTTCTTAGAGTGTCATTTGTTTTAGTACTACTTGGGATCTCTTaGGCTGCATCTGGTACCATA +
Preference number: 2 (lower is better)
Translates to: MVLSMGLPNFLRVSFVLVLLGIS*AASGTI
Trigger: TATGGTACCAGATGCAGCTCAAGAGATCCCAAGTAG...TACTAAAACAAATGACACTCTAAGAAAGTTTGGGAGCCCCATGCTGAGAACCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR-3UTR GCA 90 bp CTATTTTATGCAGTAATGGCCACGGGGGATGGAGTTAGGCTCTTACATTGTTTTATCAGAGCATTAAGTTaGAGCCAGAGACCAGTCATC +
Preference number: 2 (lower is better)
Translates to: LFYAVMATGDGVRLLHCFIRALS*SQRPVI
Trigger: GATGACTGGTCTCTGGCTGCAACTTAATGCTCTGAT...AAAACAATGTAAGAGCCTAACTCCATCCCCCGTGGCCATTACTGCATAAAATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368676.8
3UTR CAA 90 bp ACAACTATAATAAGCTGTAGGAAGAAAAGTAGCCTCTGGGCTACTTaGTGTCTAGTCACATTGACTTTCCAGGTGATGGCCCTACAAAAC +
Preference number: 2 (lower is better)
Translates to: TTIISCRKKSSLWAT*CLVTLTFQVMALQN
Trigger: GTTTTGTAGGGCCATCACCTGGAAAGTCAATGTGACTAGACACAAAGTAGCCCAGAGGCTACTTTTCTTCCTACAGCTTATTATAGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR-3UTR TCA 90 bp ATGGTTCTCAGCATGGGGCTCCCAAACTTTCTTAGAGTGTCATTTGTTTTAGTAGAAAAATCCACGCTGTaGAATGTAACCTCCTGTGTG +
Preference number: 2 (lower is better)
Translates to: MVLSMGLPNFLRVSFVLVEKSTL*NVTSCV
Trigger: CACACAGGAGGTTACATTTCACAGCGTGGATTTTTC...TACTAAAACAAATGACACTCTAAGAAAGTTTGGGAGCCCCATGCTGAGAACCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR-3UTR GCA 90 bp ATGGTTCTCAGCATGGGGCTCCCAAACTTTCTTAGAGTGTCATTTGTTTTAGTACTTAAGATTCCTGTCTaGAACCCAGGTTCTCACCAA +
Preference number: 2 (lower is better)
Translates to: MVLSMGLPNFLRVSFVLVLKIPV*NPGSHQ
Trigger: TTGGTGAGAACCTGGGTTGCAGACAGGAATCTTAAG...TACTAAAACAAATGACACTCTAAGAAAGTTTGGGAGCCCCATGCTGAGAACCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR-3UTR CCA 90 bp ATGGTTCTCAGCATGGGGCTCCCAAACTTTCTTAGAGTGTCATTTGTTTTAGTAGTCTCTATCCTGGTGTaGCTACACCTTAAGATTCCT +
Preference number: 2 (lower is better)
Translates to: MVLSMGLPNFLRVSFVLVVSILV*LHLKIP
Trigger: AGGAATCTTAAGGTGTAGCCACACCAGGATAGAGAC...TACTAAAACAAATGACACTCTAAGAAAGTTTGGGAGCCCCATGCTGAGAACCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR-3UTR CCA 90 bp TTTCCAGGTGATGGCCCTACAAAACTCAAACCACCTCTATTATTCATGCCTATAAGACCTTGTGAAACATaGCTCCCTAGTCAGGCATTT +
Preference number: 2 (lower is better)
Translates to: FPGDGPTKLKPPLLFMPIRPCET*LPSQAF
Trigger: AAATGCCTGACTAGGGAGCCATGTTTCACAAGGTCT...TATAGGCATGAATAATAGAGGTGGTTTGAGTTTTGTAGGGCCATCACCTGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR-3UTR CCA 90 bp ATGGTTCTCAGCATGGGGCTCCCAAACTTTCTTAGAGTGTCATTTGTTTTAGTAAAAGGGGCTTGTGTCTaGGTGATAGGGAAAGGTAAA +
Preference number: 2 (lower is better)
Translates to: MVLSMGLPNFLRVSFVLVKGACV*VIGKGK
Trigger: TTTACCTTTCCCTATCACCCAGACACAAGCCCCTTT...TACTAAAACAAATGACACTCTAAGAAAGTTTGGGAGCCCCATGCTGAGAACCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR CAA 90 bp TGTAGAGATAAGAATGTGTCATCAGCCATGGCCCCTAAGTGGCCATaGATGACATGGCATAAGATCACAGTTTTAACCTCCTTTAATATC +
Preference number: 2 (lower is better)
Translates to: CRDKNVSSAMAPKWP*MTWHKITVLTSFNI
Trigger: GATATTAAAGGAGGTTAAAACTGTGATCTTATGCCATGTCATCAATGGCCACTTAGGGGCCATGGCTGATGACACATTCTTATCTCTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR-3UTR TCA 90 bp TTTCCAGGTGATGGCCCTACAAAACTCAAACCACCTCTATTATTCATGCCTATATATTACAGTTTGTGGTaGTTTGCTCAGCTCCAAGCA +
Preference number: 2 (lower is better)
Translates to: FPGDGPTKLKPPLLFMPIYYSLW*FAQLQA
Trigger: TGCTTGGAGCTGAGCAAATCACCACAAACTGTAATA...TATAGGCATGAATAATAGAGGTGGTTTGAGTTTTGTAGGGCCATCACCTGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR-3UTR TCA 90 bp ATGGTTCTCAGCATGGGGCTCCCAAACTTTCTTAGAGTGTCATTTGTTTTAGTAACTCGTCAGGAGTATTaGCTCTCCTACAGTTTAATT +
Preference number: 2 (lower is better)
Translates to: MVLSMGLPNFLRVSFVLVTRQEY*LSYSLI
Trigger: AATTAAACTGTAGGAGAGTCAATACTCCTGACGAGT...TACTAAAACAAATGACACTCTAAGAAAGTTTGGGAGCCCCATGCTGAGAACCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR-3UTR CCA 90 bp TTTCCAGGTGATGGCCCTACAAAACTCAAACCACCTCTATTATTCATGCCTATAAAGACAGAGGCATCATaGCATTTTACCTTATCTGAG +
Preference number: 2 (lower is better)
Translates to: FPGDGPTKLKPPLLFMPIKTEAS*HFTLSE
Trigger: CTCAGATAAGGTAAAATGCCATGATGCCTCTGTCTT...TATAGGCATGAATAATAGAGGTGGTTTGAGTTTTGTAGGGCCATCACCTGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR CAA 90 bp GTGGGTTACAGGGCATTCAACCTGGAAGAGCTGAATAGCTTTACATaGAGAATTACTTTGTATGTTAAATCTTCTGGCCATCATTATCCA +
Preference number: 2 (lower is better)
Translates to: VGYRAFNLEELNSFT*RITLYVKSSGHHYP
Trigger: TGGATAATGATGGCCAGAAGATTTAACATACAAAGTAATTCTCAATGTAAAGCTATTCAGCTCTTCCAGGTTGAATGCCCTGTAACCCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR CCA 72 bp GACTTAGGCTGGTGGGGTTGCTCTGGGCTGCAGCCCTaGAGAAGGTTGGGCTTTGGGCATCCCTTGGGTGGG +
Preference number: 3 (lower is better)
Translates to: DLGWWGCSGLQP*RRLGFGHPLGG
Trigger: CCCACCCAAGGGATGCCCAAAGCCCAACCTTCTCCAGGGCTGCAGCCCAGAGCAACCCCACCAGCCTAAGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR GCA 72 bp CAGTCACAGGAGGCCTTGGGGACGCGTGACCTCCTCTaGAGCAGCACTGGTCACGGTCTCCATGTCATGGGA +
Preference number: 3 (lower is better)
Translates to: QSQEALGTRDLL*SSTGHGLHVMG
Trigger: TCCCATGACATGGAGACCGTGACCAGTGCTGCTGCAGAGGAGGTCACGCGTCCCCAAGGCCTCCTGTGACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368676.8
3UTR GCA 72 bp TGGCCCTGCTGCCCTGGCGCCACCTTGTGCCCTTTCTaGTGCTGGGGGTCTCATTGGCTCAGAGTGCTTAGT +
Preference number: 3 (lower is better)
Translates to: WPCCPGATLCPF*CWGSHWLRVLS
Trigger: ACTAAGCACTCTGAGCCAATGAGACCCCCAGCAGCAGAAAGGGCACAAGGTGGCGCCAGGGCAGCAGGGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR-3UTR CAA 90 bp GCTGGACTTCCCCTCCTGAGCCCCGAGAACTGTGTTGTGTCTGTTGTCATGGAACAGTCACAGGAGGCCTaGGGGACGCGTGACCTCCTC +
Preference number: 3 (lower is better)
Translates to: AGLPLLSPENCVVSVVMEQSQEA*GTRDLL
Trigger: GAGGAGGTCACGCGTCCCCAAGGCCTCCTGTGACTG...TTCCATGACAACAGACACAACACAGTTCTCGGGGCTCAGGAGGGGAAGTCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368676.8
3UTR GCA 72 bp CCCTGCTGCCCTGGCGCCACCTTGTGCCCTTTCTGCTaGTGGGGGTCTCATTGGCTCAGAGTGCTTAGTAAA +
Preference number: 3 (lower is better)
Translates to: PCCPGATLCPFC*WGSHWLRVLSK
Trigger: TTTACTAAGCACTCTGAGCCAATGAGACCCCCAGCAGCAGAAAGGGCACAAGGTGGCGCCAGGGCAGCAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR TCA 72 bp TCTGCAGACGTGCCTGGTAGGCTGGACTTCCCCTCCTaGGCCCCGAGAACTGTGTTGTGTCTGTTGTCATGG +
Preference number: 3 (lower is better)
Translates to: SADVPGRLDFPS*APRTVLCLLSW
Trigger: CCATGACAACAGACACAACACAGTTCTCGGGGCTCAGGAGGGGAAGTCCAGCCTACCAGGCACGTCTGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368676.8
3UTR GCA 72 bp GCCCTTTCTGCTGCTGGGGGTCTCATTGGCTCAGAGTaGTTAGTAAACATCAGTGGCGAGGGGGCAGGAGGA +
Preference number: 3 (lower is better)
Translates to: ALSAAGGLIGSE*LVNISGEGAGG
Trigger: TCCTCCTGCCCCCTCGCCACTGATGTTTACTAAGCACTCTGAGCCAATGAGACCCCCAGCAGCAGAAAGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR CCA 72 bp AAAGTCTGCAAGAGGTCGAGGTGCATGAGAAAGATCTaGCCCTGCTGCCCTGGCGCCACCTTGTGCCCTTTC +
Preference number: 3 (lower is better)
Translates to: KVCKRSRCMRKI*PCCPGATLCPF
Trigger: GAAAGGGCACAAGGTGGCGCCAGGGCAGCAGGGCCAGATCTTTCTCATGCACCTCGACCTCTTGCAGACTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR-3UTR CAA 90 bp CTGGCGCCACCTTGTGCCCTTTCTGCTGCTGGGGGTCTCATTGGCTCAGAGTGCTCTACTTGGGATCTCTaGAGCTGCATCTGGTACCAT +
Preference number: 3 (lower is better)
Translates to: LAPPCALSAAGGLIGSECSTWDL*SCIWYH
Trigger: ATGGTACCAGATGCAGCTCAAGAGATCCCAAGTAGA...GCACTCTGAGCCAATGAGACCCCCAGCAGCAGAAAGGGCACAAGGTGGCGCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR GCA 72 bp ACCGCCTTGAGTGACACTACAGACCCCTTCCAAACATaGTCACGGCTGGTCAGCTCAGGGTCAAGTTCTGGC +
Preference number: 3 (lower is better)
Translates to: TALSDTTDPFQT*SRLVSSGSSSG
Trigger: GCCAGAACTTGACCCTGAGCTGACCAGCCGTGAGCATGTTTGGAAGGGGTCTGTAGTGTCACTCAAGGCGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR GCA 72 bp GTACATCTCACGAAGAAAGTCTGCAAGAGGTCGAGGTaGATGAGAAAGATCTGGCCCTGCTGCCCTGGCGCC +
Preference number: 3 (lower is better)
Translates to: VHLTKKVCKRSR*MRKIWPCCPGA
Trigger: GGCGCCAGGGCAGCAGGGCCAGATCTTTCTCATGCACCTCGACCTCTTGCAGACTTTCTTCGTGAGATGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR CCA 72 bp TTCCTTGCACTGTTTCTGCAGACGTGCCTGGTAGGCTaGACTTCCCCTCCTGAGCCCCGAGAACTGTGTTGT +
Preference number: 3 (lower is better)
Translates to: FLALFLQTCLVG*TSPPEPRELCC
Trigger: ACAACACAGTTCTCGGGGCTCAGGAGGGGAAGTCCAGCCTACCAGGCACGTCTGCAGAAACAGTGCAAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368676.8
3UTR-3UTR CAA 90 bp CTGGCGCCACCTTGTGCCCTTTCTGCTGCTGGGGGTCTCATTGGCTCAGAGTGCTGCATGCTATACGAGTaGGAATGTATTAGAGCTGGG +
Preference number: 3 (lower is better)
Translates to: LAPPCALSAAGGLIGSECCMLYE*ECIRAG
Trigger: CCCAGCTCTAATACATTCCAACTCGTATAGCATGCA...GCACTCTGAGCCAATGAGACCCCCAGCAGCAGAAAGGGCACAAGGTGGCGCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR CCA 72 bp ACTTCTGGGAGGGATTGTGACTTTCAGCTGGGTAACTaGTGTCTGGCTGAGGCCATCTTGAGCGCAGTGAGG +
Preference number: 3 (lower is better)
Translates to: TSGRDCDFQLGN*CLAEAILSAVR
Trigger: CCTCACTGCGCTCAAGATGGCCTCAGCCAGACACCAGTTACCCAGCTGAAAGTCACAATCCCTCCCAGAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR TCA 72 bp CTGTGGGTTCCCTGGCTTTCTGCAAACCCTCAAACCTaGGTACTGCTGGTCACGCATGTCCACAGCAAAGAG +
Preference number: 3 (lower is better)
Translates to: LWVPWLSANPQT*VLLVTHVHSKE
Trigger: CTCTTTGCTGTGGACATGCGTGACCAGCAGTACTCAGGTTTGAGGGTTTGCAGAAAGCCAGGGAACCCACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368676.8
3UTR TCA 72 bp TTGACTGTCAAACTGGAGATGCATCGGCCTGTGGTTTaGCCTGGGAAAGGGGCTTGTGTCTGGGTGATAGGG +
Preference number: 3 (lower is better)
Translates to: LTVKLEMHRPVV*PGKGACVWVIG
Trigger: CCCTATCACCCAGACACAAGCCCCTTTCCCAGGTCAAACCACAGGCCGATGCATCTCCAGTTTGACAGTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR GCA 72 bp GTCCATGTTTTAGCAGAAGCTCAACCAGGAAGTCGCTaGCCTTCCTTGCACTGTTTCTGCAGACGTGCCTGG +
Preference number: 3 (lower is better)
Translates to: VHVLAEAQPGSR*PSLHCFCRRAW
Trigger: CCAGGCACGTCTGCAGAAACAGTGCAAGGAAGGGCAGCGACTTCCTGGTTGAGCTTCTGCTAAAACATGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368676.8
3UTR CCA 72 bp GTGACACTACAGACCCCTTCCAAACATGCTCACGGCTaGTCAGCTCAGGGTCAAGTTCTGGCTTGTCTAGTG +
Preference number: 3 (lower is better)
Translates to: VTLQTPSKHAHG*SAQGQVLACLV
Trigger: CACTAGACAAGCCAGAACTTGACCCTGAGCTGACCAGCCGTGAGCATGTTTGGAAGGGGTCTGTAGTGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR GCA 72 bp TTCCCTGGCTTTCTGCAAACCCTCAAACCTGAGTACTaGTGGTCACGCATGTCCACAGCAAAGAGCCAGAGT +
Preference number: 3 (lower is better)
Translates to: FPGFLQTLKPEY*WSRMSTAKSQS
Trigger: ACTCTGGCTCTTTGCTGTGGACATGCGTGACCAGCAGTACTCAGGTTTGAGGGTTTGCAGAAAGCCAGGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368676.8
3UTR GCA 72 bp TTGCTCAGCTCCAAGCAGTATAGGGAGGTGGCGGTTTaGAGTGCCTGGGCAGTAGGTTTCTTACAGAAACAC +
Preference number: 3 (lower is better)
Translates to: LLSSKQYREVAV*SAWAVGFLQKH
Trigger: GTGTTTCTGTAAGAAACCTACTGCCCAGGCACTGCAAACCGCCACCTCCCTATACTGCTTGGAGCTGAGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR CCA 72 bp TCCAAGCAGTATAGGGAGGTGGCGGTTTGCAGTGCCTaGGCAGTAGGTTTCTTACAGAAACACCACCTTTCC +
Preference number: 3 (lower is better)
Translates to: SKQYREVAVCSA*AVGFLQKHHLS
Trigger: GGAAAGGTGGTGTTTCTGTAAGAAACCTACTGCCCAGGCACTGCAAACCGCCACCTCCCTATACTGCTTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR-3UTR CAA 90 bp CTCTCAGGAGCAGCACTGAAGCATGTCCATGTTTTAGCAGAAGCTCAACCAGGAAGTCGCTGCCCTTCCTaGCACTGTTTCTGCAGACGT +
Preference number: 3 (lower is better)
Translates to: LSGAALKHVHVLAEAQPGSRCPS*HCFCRR
Trigger: ACGTCTGCAGAAACAGTGCAAGGAAGGGCAGCGACT...TCCTGGTTGAGCTTCTGCTAAAACATGGACATGCTTCAGTGCTGCTCCTGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368676.8
3UTR TCA 72 bp GAAGTGCTTGGCATTTCTATCAAGCACCGCCTTGAGTaGCACTACAGACCCCTTCCAAACATGCTCACGGCT +
Preference number: 3 (lower is better)
Translates to: EVLGISIKHRLE*HYRPLPNMLTA
Trigger: AGCCGTGAGCATGTTTGGAAGGGGTCTGTAGTGTCACTCAAGGCGGTGCTTGATAGAAATGCCAAGCACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR-3UTR CAA 90 bp CACAGCAAAGAGCCAGAGTTCACCGCCCTTTCTCCTACCTTCTTCTCCAGTTTGTGCCATTCAGTTTGCTaGGATGGAGATGGAATGGGT +
Preference number: 3 (lower is better)
Translates to: HSKEPEFTALSPTFFSSLCHSVC*DGDGMG
Trigger: ACCCATTCCATCTCCATCCAAGCAAACTGAATGGCA...CAAACTGGAGAAGAAGGTAGGAGAAAGGGCGGTGAACTCTGGCTCTTTGCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368676.8
3UTR TCA 72 bp GGCTCTGGCCTGAGATGGGGAATCCAGAAAATCAACTaGGATTCTACTTGGGATCTCTTGAGCTGCATCTGG +
Preference number: 3 (lower is better)
Translates to: GSGLRWGIQKIN*DSTWDLLSCIW
Trigger: CCAGATGCAGCTCAAGAGATCCCAAGTAGAATCTCAGTTGATTTTCTGGATTCCCCATCTCAGGCCAGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR CCA 72 bp TCTGGCTTGTCTAGTGTTCCAGTCTCTATCCTGGTGTaGCTACACCTTAAGATTCCTGTCTGCAACCCAGGT +
Preference number: 3 (lower is better)
Translates to: SGLSSVPVSILV*LHLKIPVCNPG
Trigger: ACCTGGGTTGCAGACAGGAATCTTAAGGTGTAGCCACACCAGGATAGAGACTGGAACACTAGACAAGCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR-3UTR CAA 90 bp AATGTCCCCCAGCAGCCTGTCATTGTGTGTGAAACTCCTAGCCTGAGAGCCCCACTTTCCAATAAGGCCTaGATCAGAAAGCAAACACAT +
Preference number: 3 (lower is better)
Translates to: NVPQQPVIVCETPSLRAPLSNKA*IRKQTH
Trigger: ATGTGTTTGCTTTCTGATCAAGGCCTTATTGGAAAG...TGGGGCTCTCAGGCTAGGAGTTTCACACACAATGACAGGCTGCTGGGGGACATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR-3UTR CAA 90 bp ATGGTTCTCAGCATGGGGCTCCCAAACTTTCTTAGAGTGTCATTTGTTTTAGTAGCATCGGCCTGTGGTTaGACCTGGGAAAGGGGCTTG +
Preference number: 3 (lower is better)
Translates to: MVLSMGLPNFLRVSFVLVASACG*TWERGL
Trigger: CAAGCCCCTTTCCCAGGTCAAACCACAGGCCGATGC...TACTAAAACAAATGACACTCTAAGAAAGTTTGGGAGCCCCATGCTGAGAACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR CCA 72 bp CAAGTTCTGGCTTGTCTAGTGTTCCAGTCTCTATCCTaGTGTGGCTACACCTTAAGATTCCTGTCTGCAACC +
Preference number: 3 (lower is better)
Translates to: QVLACLVFQSLS*CGYTLRFLSAT
Trigger: GGTTGCAGACAGGAATCTTAAGGTGTAGCCACACCAGGATAGAGACTGGAACACTAGACAAGCCAGAACTTG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR CCA 72 bp CATGGGGAACAGAGAAACTGCTTTTTGAAGATGATGTaGAAGGTCAGGGTGGGTTACAGGGCATTCAACCTG +
Preference number: 3 (lower is better)
Translates to: HGEQRNCFLKMM*KVRVGYRAFNL
Trigger: CAGGTTGAATGCCCTGTAACCCACCCTGACCTTCCACATCATCTTCAAAAAGCAGTTTCTCTGTTCCCCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR-3UTR CAA 90 bp ATCCTGGTGTGGCTACACCTTAAGATTCCTGTCTGCAACCCAGGTTCTCACCAACAACTGAGATTCTACTaGGGATCTCTTGAGCTGCAT +
Preference number: 3 (lower is better)
Translates to: ILVWLHLKIPVCNPGSHQQLRFY*GSLELH
Trigger: ATGCAGCTCAAGAGATCCCAAGTAGAATCTCAGTTG...TTGGTGAGAACCTGGGTTGCAGACAGGAATCTTAAGGTGTAGCCACACCAGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR-3UTR CAA 90 bp ACAGCAAAGAGCCAGAGTTCACCGCCCTTTCTCCTACCTTCTTCTCCAGTTTGTTCATTGCCATTCAGTTaGCTTGGATGGAGATGGAAT +
Preference number: 3 (lower is better)
Translates to: TAKSQSSPPFLLPSSPVCSLPFS*LGWRWN
Trigger: ATTCCATCTCCATCCAAGCAAACTGAATGGCAATGA...ACAAACTGGAGAAGAAGGTAGGAGAAAGGGCGGTGAACTCTGGCTCTTTGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368676.8
3UTR TCA 72 bp TCCAGAAAATCAACTGAGATTCTACTTGGGATCTCTTaGGCTGCATCTGGTACCATAAGCACAGCTGGGGGT +
Preference number: 3 (lower is better)
Translates to: SRKSTEILLGIS*AASGTISTAGG
Trigger: ACCCCCAGCTGTGCTTATGGTACCAGATGCAGCTCAAGAGATCCCAAGTAGAATCTCAGTTGATTTTCTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR-3UTR CAA 90 bp ATGGTTCTCAGCATGGGGCTCCCAAACTTTCTTAGAGTGTCATTTGTTTTAGTAGCCCCTAAGTGGCCATaGATGACATGGCATAAGATC +
Preference number: 3 (lower is better)
Translates to: MVLSMGLPNFLRVSFVLVAPKWP*MTWHKI
Trigger: GATCTTATGCCATGTCATCAATGGCCACTTAGGGGC...TACTAAAACAAATGACACTCTAAGAAAGTTTGGGAGCCCCATGCTGAGAACCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR TCA 72 bp GGAGACAAACCTTTCAGCGGAATTGCCTGGAACCCATaGAGTGAGGTCATAGAACCTACAACTATAATAAGC +
Preference number: 3 (lower is better)
Translates to: GDKPFSGIAWNP*SEVIEPTTIIS
Trigger: GCTTATTATAGTTGTAGGTTCTATGACCTCACTTCATGGGTTCCAGGCAATTCCGCTGAAAGGTTTGTCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR GCA 72 bp GAATACAGGATCATTGTATTACAGTTTGTGGTGATTTaGTCAGCTCCAAGCAGTATAGGGAGGTGGCGGTTT +
Preference number: 3 (lower is better)
Translates to: EYRIIVLQFVVI*SAPSSIGRWRF
Trigger: AAACCGCCACCTCCCTATACTGCTTGGAGCTGAGCAAATCACCACAAACTGTAATACAATGATCCTGTATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR CCA 72 bp GGAAACATCCTCACTGCACAGAAATGGTTCTCAGCATaGGGCTCCCAAACTTTCTTAGAGTGTCATTTGTTT +
Preference number: 3 (lower is better)
Translates to: GNILTAQKWFSA*GSQTFLECHLF
Trigger: AAACAAATGACACTCTAAGAAAGTTTGGGAGCCCCATGCTGAGAACCATTTCTGTGCAGTGAGGATGTTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR-3UTR CAA 90 bp ATGGTTCTCAGCATGGGGCTCCCAAACTTTCTTAGAGTGTCATTTGTTTTAGTATTGTGTCTAGTCACATaGACTTTCCAGGTGATGGCC +
Preference number: 3 (lower is better)
Translates to: MVLSMGLPNFLRVSFVLVLCLVT*TFQVMA
Trigger: GGCCATCACCTGGAAAGTCAATGTGACTAGACACAA...TACTAAAACAAATGACACTCTAAGAAAGTTTGGGAGCCCCATGCTGAGAACCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR TCA 72 bp TCATCCCACATGTGTAAGCTGGAAAAATCCACGCTGTaGAATGTAACCTCCTGTGTGTATTTCCACAATGGA +
Preference number: 3 (lower is better)
Translates to: SSHMCKLEKSTL*NVTSCVYFHNG
Trigger: TCCATTGTGGAAATACACACAGGAGGTTACATTTCACAGCGTGGATTTTTCCAGCTTACACATGTGGGATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR GCA 72 bp CCACAATGGAGAATGTTAGGCTTCGTTTCCCTCGGTTaGTACACATCTGATTACATGTGTCAGGAAAACAAA +
Preference number: 3 (lower is better)
Translates to: PQWRMLGFVSLG*YTSDYMCQENK
Trigger: TTTGTTTTCCTGACACATGTAATCAGATGTGTAGCAACCGAGGGAAACGAAGCCTAACATTCTCCATTGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR CCA 72 bp TCATCAGCCATGGCCCCTAAGTGGCCATTGATGACATaGCATAAGATCACAGTTTTAACCTCCTTTAATATC +
Preference number: 3 (lower is better)
Translates to: SSAMAPKWPLMT*HKITVLTSFNI
Trigger: GATATTAAAGGAGGTTAAAACTGTGATCTTATGCCATGTCATCAATGGCCACTTAGGGGCCATGGCTGATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR CCA 72 bp AGAGATAAGAATGTGTCATCAGCCATGGCCCCTAAGTaGCCATTGATGACATGGCATAAGATCACAGTTTTA +
Preference number: 3 (lower is better)
Translates to: RDKNVSSAMAPK*PLMTWHKITVL
Trigger: TAAAACTGTGATCTTATGCCATGTCATCAATGGCCACTTAGGGGCCATGGCTGATGACACATTCTTATCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR-3UTR CAA 90 bp ATGGTTCTCAGCATGGGGCTCCCAAACTTTCTTAGAGTGTCATTTGTTTTAGTAGTCATGAATACTATGTaGCCTAGATACAGTGGGGAA +
Preference number: 3 (lower is better)
Translates to: MVLSMGLPNFLRVSFVLVVMNTM*PRYSGE
Trigger: TTCCCCACTGTATCTAGGCAACATAGTATTCATGAC...TACTAAAACAAATGACACTCTAAGAAAGTTTGGGAGCCCCATGCTGAGAACCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR-3UTR CAA 90 bp TTTCCAGGTGATGGCCCTACAAAACTCAAACCACCTCTATTATTCATGCCTATAGAACATCACATTCCATaGGTTGTAGTTTTTGCAAGC +
Preference number: 3 (lower is better)
Translates to: FPGDGPTKLKPPLLFMPIEHHIP*VVVFAS
Trigger: GCTTGCAAAAACTACAACCAATGGAATGTGATGTTC...TATAGGCATGAATAATAGAGGTGGTTTGAGTTTTGTAGGGCCATCACCTGGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR TCA 72 bp TCTACGAATAATGATAGCAGACATGAACTATACCCATaGACATCACATTCCATTGGTTGTAGTTTTTGCAAG +
Preference number: 3 (lower is better)
Translates to: STNNDSRHELYP*TSHSIGCSFCK
Trigger: CTTGCAAAAACTACAACCAATGGAATGTGATGTTCATGGGTATAGTTCATGTCTGCTATCATTATTCGTAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR TCA 90 bp CTGAAAGCCAAACACAGCCTGGACCTGAAGCCCCTTGGCTCTGGCCTGAGATGGCGCCCGCGCCGCCGCTaGGCTCTTCTAGCCTTTCAT +
Preference number: 4 (lower is better)
Translates to: LKAKHSLDLKPLGSGLRWRPRRR*ALLAFH
Trigger: ATGAAAGGCTAGAAGAGCTCAGCGGCGGCGCGGGCG...CCATCTCAGGCCAGAGCCAAGGGGCTTCAGGTCCAGGCTGTGTTTGGCTTTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR GCA 90 bp TGTGGTGATTTGCTCAGCTCCAAGCAGTATAGGGAGGTGGCGGTTTGCAGTGCCGTGTGTGTGCGTGCGTaGGCGCGCGCGCGCCGTTCT +
Preference number: 4 (lower is better)
Translates to: CGDLLSSKQYREVAVCSAVCVRA*ARARRS
Trigger: AGAACGGCGCGCGCGCGCGCACGCACGCACACACAC...GGCACTGCAAACCGCCACCTCCCTATACTGCTTGGAGCTGAGCAAATCACCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR GCA 90 bp CTGAAAGCCAAACACAGCCTGGACCTGAAGCCCCTTGGCTCTGGCCTGAGATGGAGCAGGTCTGAGGGGTaGCAGGCGGAGCCCAGTCTC +
Preference number: 4 (lower is better)
Translates to: LKAKHSLDLKPLGSGLRWSRSEG*QAEPSL
Trigger: GAGACTGGGCTCCGCCTGGCACCCCTCAGACCTGCT...CCATCTCAGGCCAGAGCCAAGGGGCTTCAGGTCCAGGCTGTGTTTGGCTTTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CCA 90 bp CTGGCGCCACCTTGTGCCCTTTCTGCTGCTGGGGGTCTCATTGGCTCAGAGTGCTCGCCCAAGTACACGTaGGTCCCCCGGCACAGAATC +
Preference number: 4 (lower is better)
Translates to: LAPPCALSAAGGLIGSECSPKYT*VPRHRI
Trigger: GATTCTGTGCCGGGGGACCCACGTGTACTTGGGCGA...GCACTCTGAGCCAATGAGACCCCCAGCAGCAGAAAGGGCACAAGGTGGCGCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CCA 90 bp CTGGCGCCACCTTGTGCCCTTTCTGCTGCTGGGGGTCTCATTGGCTCAGAGTGCTCTGGGCTGCAGCCCTaGAGAAGGTTGGGCTTTGGG +
Preference number: 4 (lower is better)
Translates to: LAPPCALSAAGGLIGSECSGLQP*RRLGFG
Trigger: CCCAAAGCCCAACCTTCTCCAGGGCTGCAGCCCAGA...GCACTCTGAGCCAATGAGACCCCCAGCAGCAGAAAGGGCACAAGGTGGCGCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR CAA 72 bp GTTGCTCTGGGCTGCAGCCCTGGAGAAGGTTGGGCTTaGGGCATCCCTTGGGTGGGCCTTGTAGGGATAGCC +
Preference number: 4 (lower is better)
Translates to: VALGCSPGEGWA*GIPWVGLVGIA
Trigger: GGCTATCCCTACAAGGCCCACCCAAGGGATGCCCAAAGCCCAACCTTCTCCAGGGCTGCAGCCCAGAGCAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR TCA 90 bp CTGAAAGCCAAACACAGCCTGGACCTGAAGCCCCTTGGCTCTGGCCTGAGATGGGGCACAGGGCCTCCCTaGAAGCCAAACACAGCCTGG +
Preference number: 4 (lower is better)
Translates to: LKAKHSLDLKPLGSGLRWGTGPP*KPNTAW
Trigger: CCAGGCTGTGTTTGGCTTTCAGGGAGGCCCTGTGCC...CCATCTCAGGCCAGAGCCAAGGGGCTTCAGGTCCAGGCTGTGTTTGGCTTTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR GCA 90 bp GTCCACAGCAAAGAGCCAGAGTTCACCGCCCTTTCTCCTACCTTCTTCTCCAGTGTGTGTGTGCGTGCGTaGGCGCGCGCGCGCCGTTCT +
Preference number: 4 (lower is better)
Translates to: VHSKEPEFTALSPTFFSSVCVRA*ARARRS
Trigger: AGAACGGCGCGCGCGCGCGCACGCACGCACACACAC...ACTGGAGAAGAAGGTAGGAGAAAGGGCGGTGAACTCTGGCTCTTTGCTGTGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR GCA 90 bp CTGGCGCCACCTTGTGCCCTTTCTGCTGCTGGGGGTCTCATTGGCTCAGAGTGCAGTTGCTGGAGTCCCTaGACGCTGTTCCTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: LAPPCALSAAGGLIGSECSCWSP*TLFLQA
Trigger: AGCCTGCAGGAACAGCGTGCAGGGACTCCAGCAACT...GCACTCTGAGCCAATGAGACCCCCAGCAGCAGAAAGGGCACAAGGTGGCGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR GCA 90 bp CTGGCGCCACCTTGTGCCCTTTCTGCTGCTGGGGGTCTCATTGGCTCAGAGTGCTGTTGCACACCCCTCTaGCGTGGCACTGCATTGCAC +
Preference number: 4 (lower is better)
Translates to: LAPPCALSAAGGLIGSECCCTPL*RGTALH
Trigger: GTGCAATGCAGTGCCACGGCAGAGGGGTGTGCAACA...GCACTCTGAGCCAATGAGACCCCCAGCAGCAGAAAGGGCACAAGGTGGCGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR GCA 90 bp CTGAAAGCCAAACACAGCCTGGACCTGAAGCCCCTTGGCTCTGGCCTGAGATGGCAGGTCCCCTGGGCCTaGCTAAGTGCAGGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: LKAKHSLDLKPLGSGLRWQVPWA*LSAGLA
Trigger: AGCCAAGCCTGCACTTAGGCAGGCCCAGGGGACCTG...CCATCTCAGGCCAGAGCCAAGGGGCTTCAGGTCCAGGCTGTGTTTGGCTTTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR GCA 90 bp CTGAAAGCCAAACACAGCCTGGACCTGAAGCCCCTTGGCTCTGGCCTGAGATGGCCCTGGGAGCCTGCCTaGCAGTTGTCAAGGGGCACA +
Preference number: 4 (lower is better)
Translates to: LKAKHSLDLKPLGSGLRWPWEPA*QLSRGT
Trigger: TGTGCCCCTTGACAACTGGCAGGCAGGCTCCCAGGG...CCATCTCAGGCCAGAGCCAAGGGGCTTCAGGTCCAGGCTGTGTTTGGCTTTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR CAA 72 bp AAGCCACAGAGTCAATGCTGCCAGTCACAGGAGGCCTaGGGGACGCGTGACCTCCTCTGCAGCAGCACTGGT +
Preference number: 4 (lower is better)
Translates to: KPQSQCCQSQEA*GTRDLLCSSTG
Trigger: ACCAGTGCTGCTGCAGAGGAGGTCACGCGTCCCCAAGGCCTCCTGTGACTGGCAGCATTGACTCTGTGGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR TCA 90 bp CTGGCGCCACCTTGTGCCCTTTCTGCTGCTGGGGGTCTCATTGGCTCAGAGTGCGTCCACATCCTGACATaGGTGCCCATCGTGCAGGTA +
Preference number: 4 (lower is better)
Translates to: LAPPCALSAAGGLIGSECVHILT*VPIVQV
Trigger: TACCTGCACGATGGGCACTCATGTCAGGATGTGGAC...GCACTCTGAGCCAATGAGACCCCCAGCAGCAGAAAGGGCACAAGGTGGCGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR TCA 90 bp CTGGCGCCACCTTGTGCCCTTTCTGCTGCTGGGGGTCTCATTGGCTCAGAGTGCACACACTGCTGCTCGTaGGTCTGGCAGATGCCATTG +
Preference number: 4 (lower is better)
Translates to: LAPPCALSAAGGLIGSECTHCCS*VWQMPL
Trigger: CAATGGCATCTGCCAGACTCACGAGCAGCAGTGTGT...GCACTCTGAGCCAATGAGACCCCCAGCAGCAGAAAGGGCACAAGGTGGCGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR TCA 90 bp AATGTCCCCCAGCAGCCTGTCATTGTGTGTGAAACTCCTAGCCTGAGAGCCCCAATTGTGGAGCAGGTCTaGGGGGTGCCAGGCGGAGCC +
Preference number: 4 (lower is better)
Translates to: NVPQQPVIVCETPSLRAPIVEQV*GVPGGA
Trigger: GGCTCCGCCTGGCACCCCTCAGACCTGCTCCACAAT...TGGGGCTCTCAGGCTAGGAGTTTCACACACAATGACAGGCTGCTGGGGGACATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR TCA 90 bp CTGGCGCCACCTTGTGCCCTTTCTGCTGCTGGGGGTCTCATTGGCTCAGAGTGCCCCTTGGCTCTGGCCTaGGATGGGGAATCCAGAAAA +
Preference number: 4 (lower is better)
Translates to: LAPPCALSAAGGLIGSECPLALA*DGESRK
Trigger: TTTTCTGGATTCCCCATCTCAGGCCAGAGCCAAGGG...GCACTCTGAGCCAATGAGACCCCCAGCAGCAGAAAGGGCACAAGGTGGCGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR TCA 90 bp CTGGCGCCACCTTGTGCCCTTTCTGCTGCTGGGGGTCTCATTGGCTCAGAGTGCGGAGGGACAGGAGAATaGGTCACTCTGCCACCACTT +
Preference number: 4 (lower is better)
Translates to: LAPPCALSAAGGLIGSECGGTGE*VTLPPL
Trigger: AAGTGGTGGCAGAGTGACTCATTCTCCTGTCCCTCC...GCACTCTGAGCCAATGAGACCCCCAGCAGCAGAAAGGGCACAAGGTGGCGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR TCA 90 bp CTGGCGCCACCTTGTGCCCTTTCTGCTGCTGGGGGTCTCATTGGCTCAGAGTGCTTCACTGCAGCCTCCTaGTTTGACCTGATGGGAGGG +
Preference number: 4 (lower is better)
Translates to: LAPPCALSAAGGLIGSECFTAAS*FDLMGG
Trigger: CCCTCCCATCAGGTCAAATCAGGAGGCTGCAGTGAA...GCACTCTGAGCCAATGAGACCCCCAGCAGCAGAAAGGGCACAAGGTGGCGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR GCA 90 bp GCTGGACTTCCCCTCCTGAGCCCCGAGAACTGTGTTGTGTCTGTTGTCATGGAAGTGGCCCAGCTCATGTaGCAGGGTCACGGCTGCACC +
Preference number: 4 (lower is better)
Translates to: AGLPLLSPENCVVSVVMEVAQLM*QGHGCT
Trigger: GGTGCAGCCGTGACCCTGGCACATGAGCTGGGCCAC...TTCCATGACAACAGACACAACACAGTTCTCGGGGCTCAGGAGGGGAAGTCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR GCA 90 bp CTGAAAGCCAAACACAGCCTGGACCTGAAGCCCCTTGGCTCTGGCCTGAGATGGGGAGGTCACAGGAGTTaGTGGAGTCCCTGCACGCTG +
Preference number: 4 (lower is better)
Translates to: LKAKHSLDLKPLGSGLRWGGHRS*WSPCTL
Trigger: CAGCGTGCAGGGACTCCAGCAACTCCTGTGACCTCC...CCATCTCAGGCCAGAGCCAAGGGGCTTCAGGTCCAGGCTGTGTTTGGCTTTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR GCA 90 bp CTGGCGCCACCTTGTGCCCTTTCTGCTGCTGGGGGTCTCATTGGCTCAGAGTGCTTGTGCCCTTTCTGCTaGTGGGGGTCTCATTGGCTC +
Preference number: 4 (lower is better)
Translates to: LAPPCALSAAGGLIGSECLCPFC*WGSHWL
Trigger: GAGCCAATGAGACCCCCAGCAGCAGAAAGGGCACAA...GCACTCTGAGCCAATGAGACCCCCAGCAGCAGAAAGGGCACAAGGTGGCGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CCA 90 bp CTGGCGCCACCTTGTGCCCTTTCTGCTGCTGGGGGTCTCATTGGCTCAGAGTGCACAATTCCCCCAGACTaGTCTGCCGTGCACATGCTC +
Preference number: 4 (lower is better)
Translates to: LAPPCALSAAGGLIGSECTIPPD*SAVHML
Trigger: GAGCATGTGCACGGCAGACCAGTCTGGGGGAATTGT...GCACTCTGAGCCAATGAGACCCCCAGCAGCAGAAAGGGCACAAGGTGGCGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CCA 90 bp CTGGCGCCACCTTGTGCCCTTTCTGCTGCTGGGGGTCTCATTGGCTCAGAGTGCCAGTGGGCCTCGCAGTaGCAGTTCTTCCTGTTGTTG +
Preference number: 4 (lower is better)
Translates to: LAPPCALSAAGGLIGSECQWASQ*QFFLLL
Trigger: CAACAACAGGAAGAACTGCCACTGCGAGGCCCACTG...GCACTCTGAGCCAATGAGACCCCCAGCAGCAGAAAGGGCACAAGGTGGCGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CCA 90 bp CTGGCGCCACCTTGTGCCCTTTCTGCTGCTGGGGGTCTCATTGGCTCAGAGTGCTGCCCTTTCTGCTGCTaGGGGTCTCATTGGCTCAGA +
Preference number: 4 (lower is better)
Translates to: LAPPCALSAAGGLIGSECCPFCC*GSHWLR
Trigger: TCTGAGCCAATGAGACCCCCAGCAGCAGAAAGGGCA...GCACTCTGAGCCAATGAGACCCCCAGCAGCAGAAAGGGCACAAGGTGGCGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR TCA 90 bp TGTCCACAGCAAAGAGCCAGAGTTCACCGCCCTTTCTCCTACCTTCTTCTCCAGCGCCCGCGCCGCCGCTaGGCTCTTCTAGCCTTTCAT +
Preference number: 4 (lower is better)
Translates to: CPQQRARVHRPFSYLLLQRPRRR*ALLAFH
Trigger: ATGAAAGGCTAGAAGAGCTCAGCGGCGGCGCGGGCG...CTGGAGAAGAAGGTAGGAGAAAGGGCGGTGAACTCTGGCTCTTTGCTGTGGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR TCA 90 bp CTGGCGCCACCTTGTGCCCTTTCTGCTGCTGGGGGTCTCATTGGCTCAGAGTGCCTTCTTGCCCATGTCTaGGAGGGTGGTGGAAACACA +
Preference number: 4 (lower is better)
Translates to: LAPPCALSAAGGLIGSECLLAHV*EGGGNT
Trigger: TGTGTTTCCACCACCCTCTCAGACATGGGCAAGAAG...GCACTCTGAGCCAATGAGACCCCCAGCAGCAGAAAGGGCACAAGGTGGCGCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR GCA 90 bp CTGGCGCCACCTTGTGCCCTTTCTGCTGCTGGGGGTCTCATTGGCTCAGAGTGCATCCGGCCTCCTTGCTaGAGGGGGATGTTTGTTTCT +
Preference number: 4 (lower is better)
Translates to: LAPPCALSAAGGLIGSECIRPPC*RGMFVS
Trigger: AGAAACAAACATCCCCCTGCAGCAAGGAGGCCGGAT...GCACTCTGAGCCAATGAGACCCCCAGCAGCAGAAAGGGCACAAGGTGGCGCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR GCA 90 bp CTGGCGCCACCTTGTGCCCTTTCTGCTGCTGGGGGTCTCATTGGCTCAGAGTGCACCTACTGGTGGCAGTaGTCTAGAAAGGACAGCGAG +
Preference number: 4 (lower is better)
Translates to: LAPPCALSAAGGLIGSECTYWWQ*SRKDSE
Trigger: CTCGCTGTCCTTTCTAGAGCACTGCCACCAGTAGGT...GCACTCTGAGCCAATGAGACCCCCAGCAGCAGAAAGGGCACAAGGTGGCGCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR GCA 90 bp CTGAAAGCCAAACACAGCCTGGACCTGAAGCCCCTTGGCTCTGGCCTGAGATGGGTCACAGGGAGTAACTaGAGCTGCCTAGGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: LKAKHSLDLKPLGSGLRWVTGSN*SCLGLA
Trigger: AGCCAGCCCTAGGCAGCTGCAGTTACTCCCTGTGAC...CCATCTCAGGCCAGAGCCAAGGGGCTTCAGGTCCAGGCTGTGTTTGGCTTTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CCA 90 bp TGTGGTGATTTGCTCAGCTCCAAGCAGTATAGGGAGGTGGCGGTTTGCAGTGCCAAGGGAGGTGCCCAGTaGGCCTCGCAGTGGCAGTTC +
Preference number: 4 (lower is better)
Translates to: CGDLLSSKQYREVAVCSAKGGAQ*ASQWQF
Trigger: GAACTGCCACTGCGAGGCCCACTGGGCACCTCCCTT...GGCACTGCAAACCGCCACCTCCCTATACTGCTTGGAGCTGAGCAAATCACCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CCA 90 bp TGTGGTGATTTGCTCAGCTCCAAGCAGTATAGGGAGGTGGCGGTTTGCAGTGCCGGACCTGAAGCCCCTTaGCTCTGGCCTGAGATGGGG +
Preference number: 4 (lower is better)
Translates to: CGDLLSSKQYREVAVCSAGPEAP*LWPEMG
Trigger: CCCCATCTCAGGCCAGAGCCAAGGGGCTTCAGGTCC...GGCACTGCAAACCGCCACCTCCCTATACTGCTTGGAGCTGAGCAAATCACCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CCA 90 bp TGTGGTGATTTGCTCAGCTCCAAGCAGTATAGGGAGGTGGCGGTTTGCAGTGCCCTGGTGGGGTTGCTCTaGGCTGCAGCCCTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: CGDLLSSKQYREVAVCSALVGLL*AAALEK
Trigger: CTTCTCCAGGGCTGCAGCCCAGAGCAACCCCACCAG...GGCACTGCAAACCGCCACCTCCCTATACTGCTTGGAGCTGAGCAAATCACCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR TCA 90 bp CTGGCGCCACCTTGTGCCCTTTCTGCTGCTGGGGGTCTCATTGGCTCAGAGTGCGCTGAGACTGACTGCTaGATCAGAATATCCCCGTAC +
Preference number: 4 (lower is better)
Translates to: LAPPCALSAAGGLIGSECAETDC*IRISPY
Trigger: GTACGGGGATATTCTGATTCAGCAGTCAGTCTCAGC...GCACTCTGAGCCAATGAGACCCCCAGCAGCAGAAAGGGCACAAGGTGGCGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR TCA 90 bp TGTCCACAGCAAAGAGCCAGAGTTCACCGCCCTTTCTCCTACCTTCTTCTCCAGCGGCATTGGTACCAATaGCTGGCCGGCTGGCACCTC +
Preference number: 4 (lower is better)
Translates to: CPQQRARVHRPFSYLLLQRHWYQ*LAGWHL
Trigger: GAGGTGCCAGCCGGCCAGTCATTGGTACCAATGCCG...CTGGAGAAGAAGGTAGGAGAAAGGGCGGTGAACTCTGGCTCTTTGCTGTGGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR TCA 90 bp CAGCAAAGAGCCAGAGTTCACCGCCCTTTCTCCTACCTTCTTCTCCAGTTTGTTGGCCTTGGGGACGCGTaGCCTCCTCTGCAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: QQRARVHRPFSYLLLQFVGLGDA*PPLQQH
Trigger: GTGCTGCTGCAGAGGAGGTCACGCGTCCCCAAGGCC...AACAAACTGGAGAAGAAGGTAGGAGAAAGGGCGGTGAACTCTGGCTCTTTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR TCA 90 bp CTGAAAGCCAAACACAGCCTGGACCTGAAGCCCCTTGGCTCTGGCCTGAGATGGAAGCACTCGCTGAGTTaGCTGGGGCTGAGGGACATT +
Preference number: 4 (lower is better)
Translates to: LKAKHSLDLKPLGSGLRWKHSLS*LGLRDI
Trigger: AATGTCCCTCAGCCCCAGTCAACTCAGCGAGTGCTT...CCATCTCAGGCCAGAGCCAAGGGGCTTCAGGTCCAGGCTGTGTTTGGCTTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR GCA 90 bp ATTGCCATTCAGTTTGCTTGGATGGAGATGGAATGGGTGGCAGGGTCTCTGATAGTCGCCGGCCTTCAGTaGAGCAGCTCTCGGGCCCGG +
Preference number: 4 (lower is better)
Translates to: IAIQFAWMEMEWVAGSLIVAGLQ*SSSRAR
Trigger: CCGGGCCCGAGAGCTGCTGCACTGAAGGCCGGCGAC...TATCAGAGACCCTGCCACCCATTCCATCTCCATCCAAGCAAACTGAATGGCAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR GCA 90 bp CTGGCGCCACCTTGTGCCCTTTCTGCTGCTGGGGGTCTCATTGGCTCAGAGTGCACCCCACTGACAAGCTaGGCATTGTCATGGGATTTG +
Preference number: 4 (lower is better)
Translates to: LAPPCALSAAGGLIGSECTPLTS*ALSWDL
Trigger: CAAATCCCATGACAATGCGCAGCTTGTCAGTGGGGT...GCACTCTGAGCCAATGAGACCCCCAGCAGCAGAAAGGGCACAAGGTGGCGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR GCA 90 bp GATTCTACTTGGGATCTCTTGAGCTGCATCTGGTACCATAAGCACAGCTGGGGGGTGGCCCAGCTCATGTaGCAGGGTCACGGCTGCACC +
Preference number: 4 (lower is better)
Translates to: DSTWDLLSCIWYHKHSWGVAQLM*QGHGCT
Trigger: GGTGCAGCCGTGACCCTGGCACATGAGCTGGGCCAC...CCCCCAGCTGTGCTTATGGTACCAGATGCAGCTCAAGAGATCCCAAGTAGAATC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR GCA 90 bp AATGTCCCCCAGCAGCCTGTCATTGTGTGTGAAACTCCTAGCCTGAGAGCCCCAACAGCACAGCCCATGTaGGCACACAGCGTCCGGCTT +
Preference number: 4 (lower is better)
Translates to: NVPQQPVIVCETPSLRAPTAQPM*AHSVRL
Trigger: AAGCCGGACGCTGTGTGCGCACATGGGCTGTGCTGT...TGGGGCTCTCAGGCTAGGAGTTTCACACACAATGACAGGCTGCTGGGGGACATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR GCA 90 bp CAAACCCTCAAACCTGAGTACTGCTGGTCACGCATGTCCACAGCAAAGAGCCAGGAGGGCTGGCCCCTGTaGAGAACTCTGGGAGGTCAC +
Preference number: 4 (lower is better)
Translates to: QTLKPEYCWSRMSTAKSQEGWPL*RTLGGH
Trigger: GTGACCTCCCAGAGTTCTGCACAGGGGCCAGCCCTC...CTGGCTCTTTGCTGTGGACATGCGTGACCAGCAGTACTCAGGTTTGAGGGTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR GCA 90 bp ATCCTGGTGTGGCTACACCTTAAGATTCCTGTCTGCAACCCAGGTTCTCACCAAGGCAGGGACGCTAGGTaGACGTGGAGCCCGGTGGAG +
Preference number: 4 (lower is better)
Translates to: ILVWLHLKIPVCNPGSHQGRDAR*TWSPVE
Trigger: CTCCACCGGGCTCCACGTGCACCTAGCGTCCCTGCC...TTGGTGAGAACCTGGGTTGCAGACAGGAATCTTAAGGTGTAGCCACACCAGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR GCA 90 bp CTGGCGCCACCTTGTGCCCTTTCTGCTGCTGGGGGTCTCATTGGCTCAGAGTGCCTGTCAAACTGGAGATaGATCGGCCTGTGGTTTGAC +
Preference number: 4 (lower is better)
Translates to: LAPPCALSAAGGLIGSECLSNWR*IGLWFD
Trigger: GTCAAACCACAGGCCGATGCATCTCCAGTTTGACAG...GCACTCTGAGCCAATGAGACCCCCAGCAGCAGAAAGGGCACAAGGTGGCGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CCA 90 bp GATTCTACTTGGGATCTCTTGAGCTGCATCTGGTACCATAAGCACAGCTGGGGGCAGGTACACGTTGGCTaGGCAGTGAGGGCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: DSTWDLLSCIWYHKHSWGQVHVG*AVRAGP
Trigger: GGGGCCAGCCCTCACTGCCCAGCCAACGTGTACCTG...CCCCCAGCTGTGCTTATGGTACCAGATGCAGCTCAAGAGATCCCAAGTAGAATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CCA 90 bp TGTGGTGATTTGCTCAGCTCCAAGCAGTATAGGGAGGTGGCGGTTTGCAGTGCCTGCAAGCACAAGCCCTaGGTCCGGCATGTCATCGCC +
Preference number: 4 (lower is better)
Translates to: CGDLLSSKQYREVAVCSACKHKP*VRHVIA
Trigger: GGCGATGACATGCCGGACCCAGGGCTTGTGCTTGCA...GGCACTGCAAACCGCCACCTCCCTATACTGCTTGGAGCTGAGCAAATCACCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CCA 90 bp AATGTCCCCCAGCAGCCTGTCATTGTGTGTGAAACTCCTAGCCTGAGAGCCCCACACACCCCTCTGCCGTaGCACTGCATTGCACACTCG +
Preference number: 4 (lower is better)
Translates to: NVPQQPVIVCETPSLRAPHTPLP*HCIAHS
Trigger: CGAGTGTGCAATGCAGTGCCACGGCAGAGGGGTGTG...TGGGGCTCTCAGGCTAGGAGTTTCACACACAATGACAGGCTGCTGGGGGACATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CCA 90 bp GCTGGACTTCCCCTCCTGAGCCCCGAGAACTGTGTTGTGTCTGTTGTCATGGAACTTCTGCTTGCCGGATaGGGCCGCTGTCTGTGCTTC +
Preference number: 4 (lower is better)
Translates to: AGLPLLSPENCVVSVVMELLLAG*GRCLCF
Trigger: GAAGCACAGACAGCGGCCCCATCCGGCAAGCAGAAG...TTCCATGACAACAGACACAACACAGTTCTCGGGGCTCAGGAGGGGAAGTCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR CCA 90 bp CACAGCAAAGAGCCAGAGTTCACCGCCCTTTCTCCTACCTTCTTCTCCAGTTTGGGCCGCGCTCCCTGTTaGACTCTGCAGCTTCCTGCC +
Preference number: 4 (lower is better)
Translates to: HSKEPEFTALSPTFFSSLGRAPC*TLQLPA
Trigger: GGCAGGAAGCTGCAGAGTCCAACAGGGAGCGCGGCC...CAAACTGGAGAAGAAGGTAGGAGAAAGGGCGGTGAACTCTGGCTCTTTGCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR CCA 90 bp CAAACCCTCAAACCTGAGTACTGCTGGTCACGCATGTCCACAGCAAAGAGCCAGACGTGCCTGGTAGGCTaGACTTCCCCTCCTGAGCCC +
Preference number: 4 (lower is better)
Translates to: QTLKPEYCWSRMSTAKSQTCLVG*TSPPEP
Trigger: GGGCTCAGGAGGGGAAGTCCAGCCTACCAGGCACGT...CTGGCTCTTTGCTGTGGACATGCGTGACCAGCAGTACTCAGGTTTGAGGGTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR CCA 90 bp GCTGGACTTCCCCTCCTGAGCCCCGAGAACTGTGTTGTGTCTGTTGTCATGGAAAGGCTGAGGTGTCACTaGGGAAAGGGGACACTGGGC +
Preference number: 4 (lower is better)
Translates to: AGLPLLSPENCVVSVVMERLRCH*GKGTLG
Trigger: GCCCAGTGTCCCCTTTCCCCAGTGACACCTCAGCCT...TTCCATGACAACAGACACAACACAGTTCTCGGGGCTCAGGAGGGGAAGTCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR CCA 90 bp ATCCTGGTGTGGCTACACCTTAAGATTCCTGTCTGCAACCCAGGTTCTCACCAAGACGCTAGGTGCACGTaGAGCCCGGTGGAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: ILVWLHLKIPVCNPGSHQDARCT*SPVEGR
Trigger: CCTCCCCTCCACCGGGCTCCACGTGCACCTAGCGTC...TTGGTGAGAACCTGGGTTGCAGACAGGAATCTTAAGGTGTAGCCACACCAGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CCA 90 bp CTGGCGCCACCTTGTGCCCTTTCTGCTGCTGGGGGTCTCATTGGCTCAGAGTGCTCTGGGCACTTGGTGTaGATATTGTGGAGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: LAPPCALSAAGGLIGSECSGHLV*ILWSRS
Trigger: AGACCTGCTCCACAATATCCACACCAAGTGCCCAGA...GCACTCTGAGCCAATGAGACCCCCAGCAGCAGAAAGGGCACAAGGTGGCGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CCA 90 bp CTGGCGCCACCTTGTGCCCTTTCTGCTGCTGGGGGTCTCATTGGCTCAGAGTGCGTGGATCTGGGCACTTaGTGTGGATATTGTGGAGCA +
Preference number: 4 (lower is better)
Translates to: LAPPCALSAAGGLIGSECVDLGT*CGYCGA
Trigger: TGCTCCACAATATCCACACCAAGTGCCCAGATCCAC...GCACTCTGAGCCAATGAGACCCCCAGCAGCAGAAAGGGCACAAGGTGGCGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CCA 90 bp CTGAAAGCCAAACACAGCCTGGACCTGAAGCCCCTTGGCTCTGGCCTGAGATGGTATAGGCGGTGTGGGTaGATCTGGGCACTTGGTGTG +
Preference number: 4 (lower is better)
Translates to: LKAKHSLDLKPLGSGLRWYRRCG*IWALGV
Trigger: CACACCAAGTGCCCAGATCCACCCACACCGCCTATA...CCATCTCAGGCCAGAGCCAAGGGGCTTCAGGTCCAGGCTGTGTTTGGCTTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CCA 90 bp CTGAAAGCCAAACACAGCCTGGACCTGAAGCCCCTTGGCTCTGGCCTGAGATGGGCCTGTGGTTTGACCTaGGAAAGGGGCTTGTGTCTG +
Preference number: 4 (lower is better)
Translates to: LKAKHSLDLKPLGSGLRWACGLT*ERGLCL
Trigger: CAGACACAAGCCCCTTTCCCAGGTCAAACCACAGGC...CCATCTCAGGCCAGAGCCAAGGGGCTTCAGGTCCAGGCTGTGTTTGGCTTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CCA 90 bp AATGTCCCCCAGCAGCCTGTCATTGTGTGTGAAACTCCTAGCCTGAGAGCCCCAGAGAAGGTTGGGCTTTaGGCATCCCTTGGGTGGGCC +
Preference number: 4 (lower is better)
Translates to: NVPQQPVIVCETPSLRAPEKVGL*ASLGWA
Trigger: GGCCCACCCAAGGGATGCCCAAAGCCCAACCTTCTC...TGGGGCTCTCAGGCTAGGAGTTTCACACACAATGACAGGCTGCTGGGGGACATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR TCA 90 bp GATTCTACTTGGGATCTCTTGAGCTGCATCTGGTACCATAAGCACAGCTGGGGGCTGGTCCCCAGAGCGTaGCACACTGCTGCTCGTGAG +
Preference number: 4 (lower is better)
Translates to: DSTWDLLSCIWYHKHSWGLVPRA*HTAARE
Trigger: CTCACGAGCAGCAGTGTGTCACGCTCTGGGGACCAG...CCCCCAGCTGTGCTTATGGTACCAGATGCAGCTCAAGAGATCCCAAGTAGAATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR TCA 90 bp GATTCTACTTGGGATCTCTTGAGCTGCATCTGGTACCATAAGCACAGCTGGGGGCGGCATTGGTACCAATaGCTGGCCGGCTGGCACCTC +
Preference number: 4 (lower is better)
Translates to: DSTWDLLSCIWYHKHSWGRHWYQ*LAGWHL
Trigger: GAGGTGCCAGCCGGCCAGTCATTGGTACCAATGCCG...CCCCCAGCTGTGCTTATGGTACCAGATGCAGCTCAAGAGATCCCAAGTAGAATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR TCA 90 bp TGTGGTGATTTGCTCAGCTCCAAGCAGTATAGGGAGGTGGCGGTTTGCAGTGCCGTCCTGGCCAAGGCATaGGTGAGCCGAGTTGTTCTG +
Preference number: 4 (lower is better)
Translates to: CGDLLSSKQYREVAVCSAVLAKA*VSRVVL
Trigger: CAGAACAACTCGGCTCACTCATGCCTTGGCCAGGAC...GGCACTGCAAACCGCCACCTCCCTATACTGCTTGGAGCTGAGCAAATCACCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR TCA 90 bp CTGGCGCCACCTTGTGCCCTTTCTGCTGCTGGGGGTCTCATTGGCTCAGAGTGCCTACTTGGGATCTCTTaGGCTGCATCTGGTACCATA +
Preference number: 4 (lower is better)
Translates to: LAPPCALSAAGGLIGSECLLGIS*AASGTI
Trigger: TATGGTACCAGATGCAGCTCAAGAGATCCCAAGTAG...GCACTCTGAGCCAATGAGACCCCCAGCAGCAGAAAGGGCACAAGGTGGCGCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR GCA 90 bp GCCCCGAGAACTGTGTTGTGTCTGTTGTCATGGAAACGATGGCAAAGCCACAGAACCGGAGGGATTTCCTaGCTCGGCGAGTCAGCTCCG +
Preference number: 4 (lower is better)
Translates to: APRTVLCLLSWKRWQSHRTGGIS*LGESAP
Trigger: CGGAGCTGACTCGCCGAGGCAGGAAATCCCTCCGGT...TCTGTGGCTTTGCCATCGTTTCCATGACAACAGACACAACACAGTTCTCGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR GCA 90 bp TCCCTGGCTTTCTGCAAACCCTCAAACCTGAGTACTGCTGGTCACGCATGTCCACCTGCACGCTGTTCCTaGAGGCTTCAGCTGGCAGTC +
Preference number: 4 (lower is better)
Translates to: SLAFCKPSNLSTAGHACPPARCS*RLQLAV
Trigger: GACTGCCAGCTGAAGCCTGCAGGAACAGCGTGCAGG...TGGACATGCGTGACCAGCAGTACTCAGGTTTGAGGGTTTGCAGAAAGCCAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR GCA 90 bp GATTCTACTTGGGATCTCTTGAGCTGCATCTGGTACCATAAGCACAGCTGGGGGGTCACAGAAGGGAGGTaGCCAGTGGGCCTCGCAGTG +
Preference number: 4 (lower is better)
Translates to: DSTWDLLSCIWYHKHSWGVTEGR*PVGLAV
Trigger: CACTGCGAGGCCCACTGGGCACCTCCCTTCTGTGAC...CCCCCAGCTGTGCTTATGGTACCAGATGCAGCTCAAGAGATCCCAAGTAGAATC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR GCA 90 bp ATCCTGGTGTGGCTACACCTTAAGATTCCTGTCTGCAACCCAGGTTCTCACCAACTGGGCCTGCCTAAGTaGAGGCTTGGCTGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: ILVWLHLKIPVCNPGSHQLGLPK*RLGWQG
Trigger: CCCCTGCCAGCCAAGCCTGCACTTAGGCAGGCCCAG...TTGGTGAGAACCTGGGTTGCAGACAGGAATCTTAAGGTGTAGCCACACCAGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR GCA 90 bp ATCCTGGTGTGGCTACACCTTAAGATTCCTGTCTGCAACCCAGGTTCTCACCAAGAGGATGCTCAGCCCTaGCAGTCGGCCCAGCACCAG +
Preference number: 4 (lower is better)
Translates to: ILVWLHLKIPVCNPGSHQEDAQP*QSAQHQ
Trigger: CTGGTGCTGGGCCGACTGGCAGGGCTGAGCATCCTC...TTGGTGAGAACCTGGGTTGCAGACAGGAATCTTAAGGTGTAGCCACACCAGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR GCA 90 bp TGTGGTGATTTGCTCAGCTCCAAGCAGTATAGGGAGGTGGCGGTTTGCAGTGCCGGGAGTAACTGCAGCTaGCTAGGGCTGGCTTCTAGC +
Preference number: 4 (lower is better)
Translates to: CGDLLSSKQYREVAVCSAGSNCS*LGLASS
Trigger: GCTAGAAGCCAGCCCTAGGCAGCTGCAGTTACTCCC...GGCACTGCAAACCGCCACCTCCCTATACTGCTTGGAGCTGAGCAAATCACCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CCA 90 bp AATGTCCCCCAGCAGCCTGTCATTGTGTGTGAAACTCCTAGCCTGAGAGCCCCAGGTCACAGGAGTTGCTaGAGTCCCTGCACGCTGTTC +
Preference number: 4 (lower is better)
Translates to: NVPQQPVIVCETPSLRAPGHRSC*SPCTLF
Trigger: GAACAGCGTGCAGGGACTCCAGCAACTCCTGTGACC...TGGGGCTCTCAGGCTAGGAGTTTCACACACAATGACAGGCTGCTGGGGGACATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CCA 90 bp CTCTCAGGAGCAGCACTGAAGCATGTCCATGTTTTAGCAGAAGCTCAACCAGGACAGGTACACGTTGGCTaGGCAGTGAGGGCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: LSGAALKHVHVLAEAQPGQVHVG*AVRAGP
Trigger: GGGGCCAGCCCTCACTGCCCAGCCAACGTGTACCTG...TCCTGGTTGAGCTTCTGCTAAAACATGGACATGCTTCAGTGCTGCTCCTGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR CCA 90 bp GCCCCGAGAACTGTGTTGTGTCTGTTGTCATGGAAACGATGGCAAAGCCACAGACGTGCAGGTACACGTTaGCTGGGCAGTGAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: APRTVLCLLSWKRWQSHRRAGTR*LGSEGW
Trigger: CCAGCCCTCACTGCCCAGCCAACGTGTACCTGCACG...TCTGTGGCTTTGCCATCGTTTCCATGACAACAGACACAACACAGTTCTCGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR CCA 90 bp CAAACCCTCAAACCTGAGTACTGCTGGTCACGCATGTCCACAGCAAAGAGCCAGTCGCCCAAGTACACGTaGGTCCCCCGGCACAGAATC +
Preference number: 4 (lower is better)
Translates to: QTLKPEYCWSRMSTAKSQSPKYT*VPRHRI
Trigger: GATTCTGTGCCGGGGGACCCACGTGTACTTGGGCGA...CTGGCTCTTTGCTGTGGACATGCGTGACCAGCAGTACTCAGGTTTGAGGGTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR CCA 90 bp TCCCTGGCTTTCTGCAAACCCTCAAACCTGAGTACTGCTGGTCACGCATGTCCACACACCCCTCTGCCGTaGCACTGCATTGCACACTCG +
Preference number: 4 (lower is better)
Translates to: SLAFCKPSNLSTAGHACPHTPLP*HCIAHS
Trigger: CGAGTGTGCAATGCAGTGCCACGGCAGAGGGGTGTG...TGGACATGCGTGACCAGCAGTACTCAGGTTTGAGGGTTTGCAGAAAGCCAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR CCA 90 bp AATGTCCCCCAGCAGCCTGTCATTGTGTGTGAAACTCCTAGCCTGAGAGCCCCAAGTCTCCCATTGTCCTaGGGTCCTGGCCAAGGCATG +
Preference number: 4 (lower is better)
Translates to: NVPQQPVIVCETPSLRAPSLPLS*GPGQGM
Trigger: CATGCCTTGGCCAGGACCCCAGGACAATGGGAGACT...TGGGGCTCTCAGGCTAGGAGTTTCACACACAATGACAGGCTGCTGGGGGACATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CCA 90 bp AATGTCCCCCAGCAGCCTGTCATTGTGTGTGAAACTCCTAGCCTGAGAGCCCCAGAAGCCCCTTGGCTCTaGCCTGAGATGGGGAATCCA +
Preference number: 4 (lower is better)
Translates to: NVPQQPVIVCETPSLRAPEAPWL*PEMGNP
Trigger: TGGATTCCCCATCTCAGGCCAGAGCCAAGGGGCTTC...TGGGGCTCTCAGGCTAGGAGTTTCACACACAATGACAGGCTGCTGGGGGACATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CCA 90 bp CTGAAAGCCAAACACAGCCTGGACCTGAAGCCCCTTGGCTCTGGCCTGAGATGGTTTCAGCTGGGTAACTaGTGTCTGGCTGAGGCCATC +
Preference number: 4 (lower is better)
Translates to: LKAKHSLDLKPLGSGLRWFQLGN*CLAEAI
Trigger: GATGGCCTCAGCCAGACACCAGTTACCCAGCTGAAA...CCATCTCAGGCCAGAGCCAAGGGGCTTCAGGTCCAGGCTGTGTTTGGCTTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CCA 90 bp CTGAAAGCCAAACACAGCCTGGACCTGAAGCCCCTTGGCTCTGGCCTGAGATGGGCCACTGGCTTTGTGTaGGCAGCTGTGTTGAATCAG +
Preference number: 4 (lower is better)
Translates to: LKAKHSLDLKPLGSGLRWATGFV*AAVLNQ
Trigger: CTGATTCAACACAGCTGCCCACACAAAGCCAGTGGC...CCATCTCAGGCCAGAGCCAAGGGGCTTCAGGTCCAGGCTGTGTTTGGCTTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CCA 90 bp CTGAAAGCCAAACACAGCCTGGACCTGAAGCCCCTTGGCTCTGGCCTGAGATGGGAACAAGACATTGGGTaGGAGGTCCTCTGCTGGACT +
Preference number: 4 (lower is better)
Translates to: LKAKHSLDLKPLGSGLRWEQDIG*EVLCWT
Trigger: AGTCCAGCAGAGGACCTCCCACCCAATGTCTTGTTC...CCATCTCAGGCCAGAGCCAAGGGGCTTCAGGTCCAGGCTGTGTTTGGCTTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CCA 90 bp CTGGCGCCACCTTGTGCCCTTTCTGCTGCTGGGGGTCTCATTGGCTCAGAGTGCATTAGAACAAGACATTaGGTGGGAGGTCCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: LAPPCALSAAGGLIGSECIRTRH*VGGPLL
Trigger: CAGCAGAGGACCTCCCACCCAATGTCTTGTTCTAAT...GCACTCTGAGCCAATGAGACCCCCAGCAGCAGAAAGGGCACAAGGTGGCGCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR TCA 90 bp CTGAAAGCCAAACACAGCCTGGACCTGAAGCCCCTTGGCTCTGGCCTGAGATGGTCTTTTCCTTGCCTCTaGAACTCTCGGTTGTCTGCC +
Preference number: 4 (lower is better)
Translates to: LKAKHSLDLKPLGSGLRWSFPCL*NSRLSA
Trigger: GGCAGACAACCGAGAGTTTCAGAGGCAAGGAAAAGA...CCATCTCAGGCCAGAGCCAAGGGGCTTCAGGTCCAGGCTGTGTTTGGCTTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR TCA 90 bp CTGAAAGCCAAACACAGCCTGGACCTGAAGCCCCTTGGCTCTGGCCTGAGATGGATTCATGGAGGCTGGTaGATGGGTCCTGACTTACAG +
Preference number: 4 (lower is better)
Translates to: LKAKHSLDLKPLGSGLRWIHGGW*MGPDLQ
Trigger: CTGTAAGTCAGGACCCATTCACCAGCCTCCATGAAT...CCATCTCAGGCCAGAGCCAAGGGGCTTCAGGTCCAGGCTGTGTTTGGCTTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR TCA 90 bp AATGTCCCCCAGCAGCCTGTCATTGTGTGTGAAACTCCTAGCCTGAGAGCCCCATTCTCAACCGCCATTTaGCAGCTACAGCCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: NVPQQPVIVCETPSLRAPFSTAI*QLQPLS
Trigger: GGACAGGGGCTGTAGCTGTCAAATGGCGGTTGAGAA...TGGGGCTCTCAGGCTAGGAGTTTCACACACAATGACAGGCTGCTGGGGGACATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR TCA 90 bp AATGTCCCCCAGCAGCCTGTCATTGTGTGTGAAACTCCTAGCCTGAGAGCCCCAAGAGGTCGAGGTGCATaGGAAAGATCTGGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: NVPQQPVIVCETPSLRAPRGRGA*ERSGPA
Trigger: AGCAGGGCCAGATCTTTCTCATGCACCTCGACCTCT...TGGGGCTCTCAGGCTAGGAGTTTCACACACAATGACAGGCTGCTGGGGGACATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR TCA 90 bp AATGTCCCCCAGCAGCCTGTCATTGTGTGTGAAACTCCTAGCCTGAGAGCCCCATGTGGGCAGCTGTGTTaGATCAGCCTGCTGCTGAGT +
Preference number: 4 (lower is better)
Translates to: NVPQQPVIVCETPSLRAPCGQLC*ISLLLS
Trigger: ACTCAGCAGCAGGCTGATTCAACACAGCTGCCCACA...TGGGGCTCTCAGGCTAGGAGTTTCACACACAATGACAGGCTGCTGGGGGACATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR GCA 90 bp ATCCTGGTGTGGCTACACCTTAAGATTCCTGTCTGCAACCCAGGTTCTCACCAAACCGGAGGGATTTCCTaGCTCGGCGAGTCAGCTCCG +
Preference number: 4 (lower is better)
Translates to: ILVWLHLKIPVCNPGSHQTGGIS*LGESAP
Trigger: CGGAGCTGACTCGCCGAGGCAGGAAATCCCTCCGGT...TTGGTGAGAACCTGGGTTGCAGACAGGAATCTTAAGGTGTAGCCACACCAGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR GCA 90 bp AATGTCCCCCAGCAGCCTGTCATTGTGTGTGAAACTCCTAGCCTGAGAGCCCCATCCCCCAGACTGGTCTaGCGTGCACATGCTCATGAT +
Preference number: 4 (lower is better)
Translates to: NVPQQPVIVCETPSLRAPSPRLV*RAHAHD
Trigger: ATCATGAGCATGTGCACGGCAGACCAGTCTGGGGGA...TGGGGCTCTCAGGCTAGGAGTTTCACACACAATGACAGGCTGCTGGGGGACATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR GCA 90 bp ATGGAAACGATGGCAAAGCCACAGAGTCAATGCTGCCAGTCACAGGAGGCCTTGTGTTGCACACCCCTCTaGCGTGGCACTGCATTGCAC +
Preference number: 4 (lower is better)
Translates to: METMAKPQSQCCQSQEALCCTPL*RGTALH
Trigger: GTGCAATGCAGTGCCACGGCAGAGGGGTGTGCAACA...CAAGGCCTCCTGTGACTGGCAGCATTGACTCTGTGGCTTTGCCATCGTTTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR GCA 90 bp CTCTCAGGAGCAGCACTGAAGCATGTCCATGTTTTAGCAGAAGCTCAACCAGGAGTCACAGAAGGGAGGTaGCCAGTGGGCCTCGCAGTG +
Preference number: 4 (lower is better)
Translates to: LSGAALKHVHVLAEAQPGVTEGR*PVGLAV
Trigger: CACTGCGAGGCCCACTGGGCACCTCCCTTCTGTGAC...TCCTGGTTGAGCTTCTGCTAAAACATGGACATGCTTCAGTGCTGCTCCTGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR GCA 90 bp GCCCCGAGAACTGTGTTGTGTCTGTTGTCATGGAAACGATGGCAAAGCCACAGATGCCTTGCTTCTGCTTaGCGGATGGGGCCGCTGTCT +
Preference number: 4 (lower is better)
Translates to: APRTVLCLLSWKRWQSHRCLASA*RMGPLS
Trigger: AGACAGCGGCCCCATCCGGCAAGCAGAAGCAAGGCA...TCTGTGGCTTTGCCATCGTTTCCATGACAACAGACACAACACAGTTCTCGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR GCA 90 bp CAAACCCTCAAACCTGAGTACTGCTGGTCACGCATGTCCACAGCAAAGAGCCAGTGCAGCTTCCTGCCTTaGTTCTGCTTGCCGGATGGG +
Preference number: 4 (lower is better)
Translates to: QTLKPEYCWSRMSTAKSQCSFLP*FCLPDG
Trigger: CCCATCCGGCAAGCAGAAGCAAGGCAGGAAGCTGCA...CTGGCTCTTTGCTGTGGACATGCGTGACCAGCAGTACTCAGGTTTGAGGGTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR GCA 90 bp CCTGCTACTCTCTCAGGAGCAGCACTGAAGCATGTCCATGTTTTAGCAGAAGCTGTAGACGCATGCTCCTaGGATCCCACGGGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: PATLSGAALKHVHVLAEAVDACS*DPTGSW
Trigger: CCAGGAGCCCGTGGGATCGCAGGAGCATGCGTCTAC...AGCTTCTGCTAAAACATGGACATGCTTCAGTGCTGCTCCTGAGAGAGTAGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR GCA 90 bp ACTGAAGCATGTCCATGTTTTAGCAGAAGCTCAACCAGGAAGTCGCTGCCCTTCGAGGCAGTAGACGCATaGTCCTGCGATCCCACGGGC +
Preference number: 4 (lower is better)
Translates to: TEACPCFSRSSTRKSLPFEAVDA*SCDPTG
Trigger: GCCCGTGGGATCGCAGGAGCATGCGTCTACTGCCTC...GAAGGGCAGCGACTTCCTGGTTGAGCTTCTGCTAAAACATGGACATGCTTCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR GCA 90 bp TCCACAGCAAAGAGCCAGAGTTCACCGCCCTTTCTCCTACCTTCTTCTCCAGTTACGCGTGACCTCCTCTaGAGCAGCACTGGTCACGGT +
Preference number: 4 (lower is better)
Translates to: STAKSQSSPPFLLPSSPVTRDLL*SSTGHG
Trigger: ACCGTGACCAGTGCTGCTGCAGAGGAGGTCACGCGT...AACTGGAGAAGAAGGTAGGAGAAAGGGCGGTGAACTCTGGCTCTTTGCTGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR GCA 90 bp CTGAGCCCCGAGAACTGTGTTGTGTCTGTTGTCATGGAAACGATGGCAAAGCCAACTGGGCCCAACCCTTaGTTCTCCCCCACTGCTGTG +
Preference number: 4 (lower is better)
Translates to: LSPENCVVSVVMETMAKPTGPNP*FSPTAV
Trigger: CACAGCAGTGGGGGAGAAGCAAGGGTTGGGCCCAGT...TGGCTTTGCCATCGTTTCCATGACAACAGACACAACACAGTTCTCGGGGCTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR GCA 90 bp AATGTCCCCCAGCAGCCTGTCATTGTGTGTGAAACTCCTAGCCTGAGAGCCCCAGACCCCTTCCAAACATaGTCACGGCTGGTCAGCTCA +
Preference number: 4 (lower is better)
Translates to: NVPQQPVIVCETPSLRAPDPFQT*SRLVSS
Trigger: TGAGCTGACCAGCCGTGAGCATGTTTGGAAGGGGTC...TGGGGCTCTCAGGCTAGGAGTTTCACACACAATGACAGGCTGCTGGGGGACATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR GCA 90 bp TGTGGTGATTTGCTCAGCTCCAAGCAGTATAGGGAGGTGGCGGTTTGCAGTGCCGGTGGCGGTTTGCAGTaGCTGGGCAGTAGGTTTCTT +
Preference number: 4 (lower is better)
Translates to: CGDLLSSKQYREVAVCSAGGGLQ*LGSRFL
Trigger: AAGAAACCTACTGCCCAGGCACTGCAAACCGCCACC...GGCACTGCAAACCGCCACCTCCCTATACTGCTTGGAGCTGAGCAAATCACCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CCA 90 bp CTGAAAGCCAAACACAGCCTGGACCTGAAGCCCCTTGGCTCTGGCCTGAGATGGAGCTGCGCATTGTCATaGGATTTGCGAGGTAGAAGC +
Preference number: 4 (lower is better)
Translates to: LKAKHSLDLKPLGSGLRWSCALS*DLRGRS
Trigger: GCTTCTACCTCGCAAATCCCATGACAATGCGCAGCT...CCATCTCAGGCCAGAGCCAAGGGGCTTCAGGTCCAGGCTGTGTTTGGCTTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CCA 90 bp GCTGGACTTCCCCTCCTGAGCCCCGAGAACTGTGTTGTGTCTGTTGTCATGGAAGGGCCATGCCGATGGTaGTCCCTTGGAAATAAACCC +
Preference number: 4 (lower is better)
Translates to: AGLPLLSPENCVVSVVMEGPCRW*SLGNKP
Trigger: GGGTTTATTTCCAAGGGACCACCATCGGCATGGCCC...TTCCATGACAACAGACACAACACAGTTCTCGGGGCTCAGGAGGGGAAGTCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR CCA 90 bp ATGGAAACGATGGCAAAGCCACAGAGTCAATGCTGCCAGTCACAGGAGGCCTTGCCTGCAGGCTTCAGCTaGCAGTCTTCACAGCACAGC +
Preference number: 4 (lower is better)
Translates to: METMAKPQSQCCQSQEALPAGFS*QSSQHS
Trigger: GCTGTGCTGTGAAGACTGCCAGCTGAAGCCTGCAGG...CAAGGCCTCCTGTGACTGGCAGCATTGACTCTGTGGCTTTGCCATCGTTTCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR CCA 90 bp TGTGGTGATTTGCTCAGCTCCAAGCAGTATAGGGAGGTGGCGGTTTGCAGTGCCATTGGTACCAATGACTaGCCGGCTGGCACCTCCTTG +
Preference number: 4 (lower is better)
Translates to: CGDLLSSKQYREVAVCSAIGTND*PAGTSL
Trigger: CAAGGAGGTGCCAGCCGGCCAGTCATTGGTACCAAT...GGCACTGCAAACCGCCACCTCCCTATACTGCTTGGAGCTGAGCAAATCACCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CCA 90 bp TGTGTCTGTTGTCATGGAAACGATGGCAAAGCCACAGAGTCAATGCTGCCAGTCAAGGGAGGTGCCCAGTaGGCCTCGCAGTGGCAGTTC +
Preference number: 4 (lower is better)
Translates to: CVCCHGNDGKATESMLPVKGGAQ*ASQWQF
Trigger: GAACTGCCACTGCGAGGCCCACTGGGCACCTCCCTT...GACTGGCAGCATTGACTCTGTGGCTTTGCCATCGTTTCCATGACAACAGACACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR CCA 90 bp GCTGGACTTCCCCTCCTGAGCCCCGAGAACTGTGTTGTGTCTGTTGTCATGGAACCTCTGCAGCAGCACTaGTCACGGTCTCCATGTCAT +
Preference number: 4 (lower is better)
Translates to: AGLPLLSPENCVVSVVMEPLQQH*SRSPCH
Trigger: ATGACATGGAGACCGTGACCAGTGCTGCTGCAGAGG...TTCCATGACAACAGACACAACACAGTTCTCGGGGCTCAGGAGGGGAAGTCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR CCA 90 bp TCCACAGCAAAGAGCCAGAGTTCACCGCCCTTTCTCCTACCTTCTTCTCCAGTTGGGGAAAGGGGACACTaGGCCCAACCCTTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: STAKSQSSPPFLLPSSPVGERGH*AQPLLL
Trigger: GAGAAGCAAGGGTTGGGCCCAGTGTCCCCTTTCCCC...AACTGGAGAAGAAGGTAGGAGAAAGGGCGGTGAACTCTGGCTCTTTGCTGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR CCA 90 bp ATCCTGGTGTGGCTACACCTTAAGATTCCTGTCTGCAACCCAGGTTCTCACCAAAAGTGCAGGCTTGGCTaGCAGGGGTCTGGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: ILVWLHLKIPVCNPGSHQKCRLG*QGSGRD
Trigger: GTCCCTGCCAGACCCCTGCCAGCCAAGCCTGCACTT...TTGGTGAGAACCTGGGTTGCAGACAGGAATCTTAAGGTGTAGCCACACCAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CCA 90 bp ATCCTGGTGTGGCTACACCTTAAGATTCCTGTCTGCAACCCAGGTTCTCACCAAGGCTTACAGGTCCCCTaGGCCTGCCTAAGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: ILVWLHLKIPVCNPGSHQGLQVP*ACLSAG
Trigger: GCCTGCACTTAGGCAGGCCCAGGGGACCTGTAAGCC...TTGGTGAGAACCTGGGTTGCAGACAGGAATCTTAAGGTGTAGCCACACCAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CCA 90 bp AATGTCCCCCAGCAGCCTGTCATTGTGTGTGAAACTCCTAGCCTGAGAGCCCCAGGCTGGCTTCTAGCATaGAGAGGAGAGGAAAAGGGG +
Preference number: 4 (lower is better)
Translates to: NVPQQPVIVCETPSLRAPGWLLA*RGEEKG
Trigger: CCCCTTTTCCTCTCCTCTCCATGCTAGAAGCCAGCC...TGGGGCTCTCAGGCTAGGAGTTTCACACACAATGACAGGCTGCTGGGGGACATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR TCA 90 bp CTGAAAGCCAAACACAGCCTGGACCTGAAGCCCCTTGGCTCTGGCCTGAGATGGAGGTTTGGTGTGTTGTaGTGTGATCCACATGATCCC +
Preference number: 4 (lower is better)
Translates to: LKAKHSLDLKPLGSGLRWRFGVL*CDPHDP
Trigger: GGGATCATGTGGATCACATCACAACACACCAAACCT...CCATCTCAGGCCAGAGCCAAGGGGCTTCAGGTCCAGGCTGTGTTTGGCTTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR TCA 90 bp ACTGAAGCATGTCCATGTTTTAGCAGAAGCTCAACCAGGAAGTCGCTGCCCTTCCCGTGCACATGCTCATaGTTGGGGCCATGCCGATGG +
Preference number: 4 (lower is better)
Translates to: TEACPCFSRSSTRKSLPFPCTCS*LGPCRW
Trigger: CCATCGGCATGGCCCCAATCATGAGCATGTGCACGG...GAAGGGCAGCGACTTCCTGGTTGAGCTTCTGCTAAAACATGGACATGCTTCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR TCA 90 bp AATGTCCCCCAGCAGCCTGTCATTGTGTGTGAAACTCCTAGCCTGAGAGCCCCACGGTGGAAGCGTTCATaGTGCAGCCTCCTTTCTCAA +
Preference number: 4 (lower is better)
Translates to: NVPQQPVIVCETPSLRAPRWKRS*CSLLSQ
Trigger: TTGAGAAAGGAGGCTGCATCATGAACGCTTCCACCG...TGGGGCTCTCAGGCTAGGAGTTTCACACACAATGACAGGCTGCTGGGGGACATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR TCA 90 bp AATGTCCCCCAGCAGCCTGTCATTGTGTGTGAAACTCCTAGCCTGAGAGCCCCACGGCTGGCACCTCCTTaGCACTGGATTTTTCCACAT +
Preference number: 4 (lower is better)
Translates to: NVPQQPVIVCETPSLRAPRLAPP*HWIFPH
Trigger: ATGTGGAAAAATCCAGTGTCAAGGAGGTGCCAGCCG...TGGGGCTCTCAGGCTAGGAGTTTCACACACAATGACAGGCTGCTGGGGGACATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR TCA 90 bp ACTGAAGCATGTCCATGTTTTAGCAGAAGCTCAACCAGGAAGTCGCTGCCCTTCCTGGACTTCCCCTCCTaGGCCCCGAGAACTGTGTTG +
Preference number: 4 (lower is better)
Translates to: TEACPCFSRSSTRKSLPFLDFPS*APRTVL
Trigger: CAACACAGTTCTCGGGGCTCAGGAGGGGAAGTCCAG...GAAGGGCAGCGACTTCCTGGTTGAGCTTCTGCTAAAACATGGACATGCTTCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR TCA 90 bp CTGGCGCCACCTTGTGCCCTTTCTGCTGCTGGGGGTCTCATTGGCTCAGAGTGCCTTTTGTGGTTTCTGTaGTGTCATCCCACATGTGTA +
Preference number: 4 (lower is better)
Translates to: LAPPCALSAAGGLIGSECLLWFL*CHPTCV
Trigger: TACACATGTGGGATGACATCACAGAAACCACAAAAG...GCACTCTGAGCCAATGAGACCCCCAGCAGCAGAAAGGGCACAAGGTGGCGCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR TCA 90 bp TGTGGTGATTTGCTCAGCTCCAAGCAGTATAGGGAGGTGGCGGTTTGCAGTGCCCCTCCTGATTTGACCTaGTGGGAGGGACAGGAGAAT +
Preference number: 4 (lower is better)
Translates to: CGDLLSSKQYREVAVCSAPPDLT*WEGQEN
Trigger: ATTCTCCTGTCCCTCCCATCAGGTCAAATCAGGAGG...GGCACTGCAAACCGCCACCTCCCTATACTGCTTGGAGCTGAGCAAATCACCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR GCA 90 bp TGTGGTGATTTGCTCAGCTCCAAGCAGTATAGGGAGGTGGCGGTTTGCAGTGCCAAACTCTCGGTTGTCTaGCACGATCACCAGCTCCAC +
Preference number: 4 (lower is better)
Translates to: CGDLLSSKQYREVAVCSAKLSVV*HDHQLH
Trigger: GTGGAGCTGGTGATCGTGGCAGACAACCGAGAGTTT...GGCACTGCAAACCGCCACCTCCCTATACTGCTTGGAGCTGAGCAAATCACCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR GCA 90 bp ATCCTGGTGTGGCTACACCTTAAGATTCCTGTCTGCAACCCAGGTTCTCACCAACCTGCACGCTGTTCCTaGAGGCTTCAGCTGGCAGTC +
Preference number: 4 (lower is better)
Translates to: ILVWLHLKIPVCNPGSHQPARCS*RLQLAV
Trigger: GACTGCCAGCTGAAGCCTGCAGGAACAGCGTGCAGG...TTGGTGAGAACCTGGGTTGCAGACAGGAATCTTAAGGTGTAGCCACACCAGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR GCA 90 bp ACAGCAAAGAGCCAGAGTTCACCGCCCTTTCTCCTACCTTCTTCTCCAGTTTGTGGAGGTCACAGGAGTTaGTGGAGTCCCTGCACGCTG +
Preference number: 4 (lower is better)
Translates to: TAKSQSSPPFLLPSSPVCGGHRS*WSPCTL
Trigger: CAGCGTGCAGGGACTCCAGCAACTCCTGTGACCTCC...ACAAACTGGAGAAGAAGGTAGGAGAAAGGGCGGTGAACTCTGGCTCTTTGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR GCA 90 bp GATTCTACTTGGGATCTCTTGAGCTGCATCTGGTACCATAAGCACAGCTGGGGGCATGAGTGCCCATCGTaGAGGTACACGTTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: DSTWDLLSCIWYHKHSWGHECPS*RYTLAG
Trigger: CCCAGCCAACGTGTACCTGCACGATGGGCACTCATG...CCCCCAGCTGTGCTTATGGTACCAGATGCAGCTCAAGAGATCCCAAGTAGAATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR GCA 90 bp AATGTCCCCCAGCAGCCTGTCATTGTGTGTGAAACTCCTAGCCTGAGAGCCCCAAGAATCCGGCCTCCTTaGTGCAGGGGGATGTTTGTT +
Preference number: 4 (lower is better)
Translates to: NVPQQPVIVCETPSLRAPRIRPP*CRGMFV
Trigger: AACAAACATCCCCCTGCAGCAAGGAGGCCGGATTCT...TGGGGCTCTCAGGCTAGGAGTTTCACACACAATGACAGGCTGCTGGGGGACATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR GCA 90 bp TGTCCACAGCAAAGAGCCAGAGTTCACCGCCCTTTCTCCTACCTTCTTCTCCAGGCCGTGGCACTGCATTaGACACTCGTGAACCCCAAA +
Preference number: 4 (lower is better)
Translates to: CPQQRARVHRPFSYLLLQAVALH*TLVNPK
Trigger: TTTGGGGTTCACGAGTGTGCAATGCAGTGCCACGGC...CTGGAGAAGAAGGTAGGAGAAAGGGCGGTGAACTCTGGCTCTTTGCTGTGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR GCA 90 bp TGTGGTGATTTGCTCAGCTCCAAGCAGTATAGGGAGGTGGCGGTTTGCAGTGCCTGCAAGAGGTCGAGGTaGATGAGAAAGATCTGGCCC +
Preference number: 4 (lower is better)
Translates to: CGDLLSSKQYREVAVCSACKRSR*MRKIWP
Trigger: GGGCCAGATCTTTCTCATGCACCTCGACCTCTTGCA...GGCACTGCAAACCGCCACCTCCCTATACTGCTTGGAGCTGAGCAAATCACCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CCA 90 bp GTCCACAGCAAAGAGCCAGAGTTCACCGCCCTTTCTCCTACCTTCTTCTCCAGTGTCGAAGCTCTTCACTaGGATCCAGAGGTCCCCACT +
Preference number: 4 (lower is better)
Translates to: VHSKEPEFTALSPTFFSSVEALH*DPEVPT
Trigger: AGTGGGGACCTCTGGATCCCAGTGAAGAGCTTCGAC...ACTGGAGAAGAAGGTAGGAGAAAGGGCGGTGAACTCTGGCTCTTTGCTGTGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR CCA 90 bp TCCCTGGCTTTCTGCAAACCCTCAAACCTGAGTACTGCTGGTCACGCATGTCCACAGTGGGCCTCGCAGTaGCAGTTCTTCCTGTTGTTG +
Preference number: 4 (lower is better)
Translates to: SLAFCKPSNLSTAGHACPQWASQ*QFFLLL
Trigger: CAACAACAGGAAGAACTGCCACTGCGAGGCCCACTG...TGGACATGCGTGACCAGCAGTACTCAGGTTTGAGGGTTTGCAGAAAGCCAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR CCA 90 bp AATGTCCCCCAGCAGCCTGTCATTGTGTGTGAAACTCCTAGCCTGAGAGCCCCAGCGGTTTGCAGTGCCTaGGCAGTAGGTTTCTTACAG +
Preference number: 4 (lower is better)
Translates to: NVPQQPVIVCETPSLRAPAVCSA*AVGFLQ
Trigger: CTGTAAGAAACCTACTGCCCAGGCACTGCAAACCGC...TGGGGCTCTCAGGCTAGGAGTTTCACACACAATGACAGGCTGCTGGGGGACATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CCA 90 bp GATTCTACTTGGGATCTCTTGAGCTGCATCTGGTACCATAAGCACAGCTGGGGGAGCCCTGGAGAAGGTTaGGCTTTGGGCATCCCTTGG +
Preference number: 4 (lower is better)
Translates to: DSTWDLLSCIWYHKHSWGSPGEG*ALGIPW
Trigger: CCAAGGGATGCCCAAAGCCCAACCTTCTCCAGGGCT...CCCCCAGCTGTGCTTATGGTACCAGATGCAGCTCAAGAGATCCCAAGTAGAATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR CAA 72 bp TGCTCACGGCTGGTCAGCTCAGGGTCAAGTTCTGGCTaGTCTAGTGTTCCAGTCTCTATCCTGGTGTGGCTA +
Preference number: 4 (lower is better)
Translates to: CSRLVSSGSSSG*SSVPVSILVWL
Trigger: TAGCCACACCAGGATAGAGACTGGAACACTAGACAAGCCAGAACTTGACCCTGAGCTGACCAGCCGTGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR TCA 90 bp AATGTCCCCCAGCAGCCTGTCATTGTGTGTGAAACTCCTAGCCTGAGAGCCCCATGTCTGAATGGTCCATaGCAATTCCCCCAGACTGGT +
Preference number: 4 (lower is better)
Translates to: NVPQQPVIVCETPSLRAPCLNGP*QFPQTG
Trigger: ACCAGTCTGGGGGAATTGTCATGGACCATTCAGACA...TGGGGCTCTCAGGCTAGGAGTTTCACACACAATGACAGGCTGCTGGGGGACATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR TCA 90 bp CTGAAAGCCAAACACAGCCTGGACCTGAAGCCCCTTGGCTCTGGCCTGAGATGGTGCATTGCACACTCGTaGACCCCAAAGACACTAATA +
Preference number: 4 (lower is better)
Translates to: LKAKHSLDLKPLGSGLRWCIAHS*TPKTLI
Trigger: TATTAGTGTCTTTGGGGTTCACGAGTGTGCAATGCA...CCATCTCAGGCCAGAGCCAAGGGGCTTCAGGTCCAGGCTGTGTTTGGCTTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR TCA 90 bp TCCCTGGCTTTCTGCAAACCCTCAAACCTGAGTACTGCTGGTCACGCATGTCCATCAGATGAGTGTCAGTaGGGCAGTAGACGCATGCTC +
Preference number: 4 (lower is better)
Translates to: SLAFCKPSNLSTAGHACPSDECQ*GSRRML
Trigger: GAGCATGCGTCTACTGCCTCACTGACACTCATCTGA...TGGACATGCGTGACCAGCAGTACTCAGGTTTGAGGGTTTGCAGAAAGCCAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR TCA 90 bp GCTGGACTTCCCCTCCTGAGCCCCGAGAACTGTGTTGTGTCTGTTGTCATGGAAGAAAGGCCAGACTTTTaGGTCCTCTTCCTCCTTGCT +
Preference number: 4 (lower is better)
Translates to: AGLPLLSPENCVVSVVMEERPDF*VLFLLA
Trigger: AGCAAGGAGGAAGAGGACTCAAAAGTCTGGCCTTTC...TTCCATGACAACAGACACAACACAGTTCTCGGGGCTCAGGAGGGGAAGTCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR TCA 90 bp ATCCTGGTGTGGCTACACCTTAAGATTCCTGTCTGCAACCCAGGTTCTCACCAATGGCCAAGGCATGAGTaGGCCGAGTTGTTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: ILVWLHLKIPVCNPGSHQWPRHE*AELFWP
Trigger: TGGCCAGAACAACTCGGCTCACTCATGCCTTGGCCA...TTGGTGAGAACCTGGGTTGCAGACAGGAATCTTAAGGTGTAGCCACACCAGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR GCA 90 bp CAAACCCTCAAACCTGAGTACTGCTGGTCACGCATGTCCACAGCAAAGAGCCAGAAACTCTCGGTTGTCTaGCACGATCACCAGCTCCAC +
Preference number: 4 (lower is better)
Translates to: QTLKPEYCWSRMSTAKSQKLSVV*HDHQLH
Trigger: GTGGAGCTGGTGATCGTGGCAGACAACCGAGAGTTT...CTGGCTCTTTGCTGTGGACATGCGTGACCAGCAGTACTCAGGTTTGAGGGTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR GCA 90 bp TGTGTCTGTTGTCATGGAAACGATGGCAAAGCCACAGAGTCAATGCTGCCAGTCCATGAGTGCCCATCGTaGAGGTACACGTTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: CVCCHGNDGKATESMLPVHECPS*RYTLAG
Trigger: CCCAGCCAACGTGTACCTGCACGATGGGCACTCATG...GACTGGCAGCATTGACTCTGTGGCTTTGCCATCGTTTCCATGACAACAGACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR GCA 90 bp ATGGAAACGATGGCAAAGCCACAGAGTCAATGCTGCCAGTCACAGGAGGCCTTGCGTGAGTCTGGCAGATaGCATTGTAGCAGTAGCCGT +
Preference number: 4 (lower is better)
Translates to: METMAKPQSQCCQSQEALRESGR*HCSSSR
Trigger: ACGGCTACTGCTACAATGGCATCTGCCAGACTCACG...CAAGGCCTCCTGTGACTGGCAGCATTGACTCTGTGGCTTTGCCATCGTTTCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR GCA 90 bp GATTCTACTTGGGATCTCTTGAGCTGCATCTGGTACCATAAGCACAGCTGGGGGAGTTCTTCCTGTTGTTaGACACCCCTCTGCCGTGGC +
Preference number: 4 (lower is better)
Translates to: DSTWDLLSCIWYHKHSWGSSSCC*TPLCRG
Trigger: GCCACGGCAGAGGGGTGTGCAACAACAGGAAGAACT...CCCCCAGCTGTGCTTATGGTACCAGATGCAGCTCAAGAGATCCCAAGTAGAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR GCA 90 bp ATCCTGGTGTGGCTACACCTTAAGATTCCTGTCTGCAACCCAGGTTCTCACCAACCTTGGTTATCTGCTTaGCGGATGGGGCCGCTGTCT +
Preference number: 4 (lower is better)
Translates to: ILVWLHLKIPVCNPGSHQPWLSA*RMGPLS
Trigger: AGACAGCGGCCCCATCCGGCAAGCAGATAACCAAGG...TTGGTGAGAACCTGGGTTGCAGACAGGAATCTTAAGGTGTAGCCACACCAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR GCA 90 bp CTGGCGCCACCTTGTGCCCTTTCTGCTGCTGGGGGTCTCATTGGCTCAGAGTGCACCGGGAAAGTGAAATaGAGTTTTGTTTTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: LAPPCALSAAGGLIGSECTGKVK*SFVFWK
Trigger: CTTCCAGAAAACAAAACTGCATTTCACTTTCCCGGT...GCACTCTGAGCCAATGAGACCCCCAGCAGCAGAAAGGGCACAAGGTGGCGCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR GCA 90 bp GATTCTACTTGGGATCTCTTGAGCTGCATCTGGTACCATAAGCACAGCTGGGGGACCTTGTGCCCTTTCTaGTGCTGGGGGTCTCATTGG +
Preference number: 4 (lower is better)
Translates to: DSTWDLLSCIWYHKHSWGTLCPF*CWGSHW
Trigger: CCAATGAGACCCCCAGCAGCAGAAAGGGCACAAGGT...CCCCCAGCTGTGCTTATGGTACCAGATGCAGCTCAAGAGATCCCAAGTAGAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CCA 90 bp GATTCTACTTGGGATCTCTTGAGCTGCATCTGGTACCATAAGCACAGCTGGGGGGTCGAAGCTCTTCACTaGGATCCAGAGGTCCCCACT +
Preference number: 4 (lower is better)
Translates to: DSTWDLLSCIWYHKHSWGVEALH*DPEVPT
Trigger: AGTGGGGACCTCTGGATCCCAGTGAAGAGCTTCGAC...CCCCCAGCTGTGCTTATGGTACCAGATGCAGCTCAAGAGATCCCAAGTAGAATC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CCA 90 bp CTGGCGCCACCTTGTGCCCTTTCTGCTGCTGGGGGTCTCATTGGCTCAGAGTGCGATCCGAATGTTCAGTaGTCTGTAAAACTTGTCAAC +
Preference number: 4 (lower is better)
Translates to: LAPPCALSAAGGLIGSECDPNVQ*SVKLVN
Trigger: GTTGACAAGTTTTACAGACCACTGAACATTCGGATC...GCACTCTGAGCCAATGAGACCCCCAGCAGCAGAAAGGGCACAAGGTGGCGCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CCA 90 bp AATGTCCCCCAGCAGCCTGTCATTGTGTGTGAAACTCCTAGCCTGAGAGCCCCAATGGAGGCTGGTGAATaGGTCCTGACTTACAGAGCA +
Preference number: 4 (lower is better)
Translates to: NVPQQPVIVCETPSLRAPMEAGE*VLTYRA
Trigger: TGCTCTGTAAGTCAGGACCCATTCACCAGCCTCCAT...TGGGGCTCTCAGGCTAGGAGTTTCACACACAATGACAGGCTGCTGGGGGACATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CCA 90 bp GTCCACAGCAAAGAGCCAGAGTTCACCGCCCTTTCTCCTACCTTCTTCTCCAGTTCAGGGTACAGGTGGTaGCATTGCAGCAGCGATTCA +
Preference number: 4 (lower is better)
Translates to: VHSKEPEFTALSPTFFSSSGYRW*HCSSDS
Trigger: TGAATCGCTGCTGCAATGCCACCACCTGTACCCTGA...ACTGGAGAAGAAGGTAGGAGAAAGGGCGGTGAACTCTGGCTCTTTGCTGTGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368676.8
3UTR CAA 72 bp TTTGACTGTCAAACTGGAGATGCATCGGCCTGTGGTTaGACCTGGGAAAGGGGCTTGTGTCTGGGTGATAGG +
Preference number: 4 (lower is better)
Translates to: FDCQTGDASACG*TWERGLCLGDR
Trigger: CCTATCACCCAGACACAAGCCCCTTTCCCAGGTCAAACCACAGGCCGATGCATCTCCAGTTTGACAGTCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR TCA 90 bp GCTGGACTTCCCCTCCTGAGCCCCGAGAACTGTGTTGTGTCTGTTGTCATGGAATTCAGCACTTCTGGATaGTTCTTGGAGTCGAAGCTC +
Preference number: 4 (lower is better)
Translates to: AGLPLLSPENCVVSVVMEFSTSG*FLESKL
Trigger: GAGCTTCGACTCCAAGAATCATCCAGAAGTGCTGAA...TTCCATGACAACAGACACAACACAGTTCTCGGGGCTCAGGAGGGGAAGTCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR TCA 90 bp TGTGGTGATTTGCTCAGCTCCAAGCAGTATAGGGAGGTGGCGGTTTGCAGTGCCTTCAGCACTTCTGGATaGTTCTTGGAGTCGAAGCTC +
Preference number: 4 (lower is better)
Translates to: CGDLLSSKQYREVAVCSAFSTSG*FLESKL
Trigger: GAGCTTCGACTCCAAGAATCATCCAGAAGTGCTGAA...GGCACTGCAAACCGCCACCTCCCTATACTGCTTGGAGCTGAGCAAATCACCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR TCA 90 bp TGTCCACAGCAAAGAGCCAGAGTTCACCGCCCTTTCTCCTACCTTCTTCTCCAGCTGGTGAATGGGTCCTaGCTTACAGAGCATTTGTCC +
Preference number: 4 (lower is better)
Translates to: CPQQRARVHRPFSYLLLQLVNGS*LTEHLS
Trigger: GGACAAATGCTCTGTAAGTCAGGACCCATTCACCAG...CTGGAGAAGAAGGTAGGAGAAAGGGCGGTGAACTCTGGCTCTTTGCTGTGGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR TCA 90 bp ATGGAAACGATGGCAAAGCCACAGAGTCAATGCTGCCAGTCACAGGAGGCCTTGTGTCTGAATGGTCCATaGCAATTCCCCCAGACTGGT +
Preference number: 4 (lower is better)
Translates to: METMAKPQSQCCQSQEALCLNGP*QFPQTG
Trigger: ACCAGTCTGGGGGAATTGTCATGGACCATTCAGACA...CAAGGCCTCCTGTGACTGGCAGCATTGACTCTGTGGCTTTGCCATCGTTTCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR TCA 90 bp AATGTCCCCCAGCAGCCTGTCATTGTGTGTGAAACTCCTAGCCTGAGAGCCCCAACCAAGGGGATTGTCTaGATGGTCCATGACAATTCC +
Preference number: 4 (lower is better)
Translates to: NVPQQPVIVCETPSLRAPTKGIV*MVHDNS
Trigger: GGAATTGTCATGGACCATTCAGACAATCCCCTTGGT...TGGGGCTCTCAGGCTAGGAGTTTCACACACAATGACAGGCTGCTGGGGGACATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR TCA 90 bp CTCTCAGGAGCAGCACTGAAGCATGTCCATGTTTTAGCAGAAGCTCAACCAGGATTCTCAACCGCCATTTaGCAGCTACAGCCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: LSGAALKHVHVLAEAQPGFSTAI*QLQPLS
Trigger: GGACAGGGGCTGTAGCTGTCAAATGGCGGTTGAGAA...TCCTGGTTGAGCTTCTGCTAAAACATGGACATGCTTCAGTGCTGCTCCTGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR TCA 90 bp TGTGTCTGTTGTCATGGAAACGATGGCAAAGCCACAGAGTCAATGCTGCCAGTCGTCCACATCCTGACATaGGTGCCCATCGTGCAGGTA +
Preference number: 4 (lower is better)
Translates to: CVCCHGNDGKATESMLPVVHILT*VPIVQV
Trigger: TACCTGCACGATGGGCACTCATGTCAGGATGTGGAC...GACTGGCAGCATTGACTCTGTGGCTTTGCCATCGTTTCCATGACAACAGACACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR TCA 90 bp ACAGCAAAGAGCCAGAGTTCACCGCCCTTTCTCCTACCTTCTTCTCCAGTTTGTACACACTGCTGCTCGTaGGTCTGGCAGATGCCATTG +
Preference number: 4 (lower is better)
Translates to: TAKSQSSPPFLLPSSPVCTHCCS*VWQMPL
Trigger: CAATGGCATCTGCCAGACTCACGAGCAGCAGTGTGT...ACAAACTGGAGAAGAAGGTAGGAGAAAGGGCGGTGAACTCTGGCTCTTTGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR TCA 90 bp CTGAAAGCCAAACACAGCCTGGACCTGAAGCCCCTTGGCTCTGGCCTGAGATGGTCAAGGTCTTCCTTTTaGGATAAACCACAAATCCGG +
Preference number: 4 (lower is better)
Translates to: LKAKHSLDLKPLGSGLRWSRSSF*DKPQIR
Trigger: CCGGATTTGTGGTTTATCTCAAAAGGAAGACCTTGA...CCATCTCAGGCCAGAGCCAAGGGGCTTCAGGTCCAGGCTGTGTTTGGCTTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR TCA 90 bp AATGTCCCCCAGCAGCCTGTCATTGTGTGTGAAACTCCTAGCCTGAGAGCCCCAATTGCCTGGAACCCATaGAGTGAGGTCATAGAACCT +
Preference number: 4 (lower is better)
Translates to: NVPQQPVIVCETPSLRAPIAWNP*SEVIEP
Trigger: AGGTTCTATGACCTCACTTCATGGGTTCCAGGCAAT...TGGGGCTCTCAGGCTAGGAGTTTCACACACAATGACAGGCTGCTGGGGGACATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR TCA 90 bp ATCCTGGTGTGGCTACACCTTAAGATTCCTGTCTGCAACCCAGGTTCTCACCAAGAATCAGCCTGCTGCTaGGTCACAGGGAGTAACTGC +
Preference number: 4 (lower is better)
Translates to: ILVWLHLKIPVCNPGSHQESACC*VTGSNC
Trigger: GCAGTTACTCCCTGTGACTCAGCAGCAGGCTGATTC...TTGGTGAGAACCTGGGTTGCAGACAGGAATCTTAAGGTGTAGCCACACCAGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR TCA 90 bp CTGAAAGCCAAACACAGCCTGGACCTGAAGCCCCTTGGCTCTGGCCTGAGATGGATGGAAGTAGTGATTTaGCTGTCAAACTGGAGATGC +
Preference number: 4 (lower is better)
Translates to: LKAKHSLDLKPLGSGLRWMEVVI*LSNWRC
Trigger: GCATCTCCAGTTTGACAGTCAAATCACTACTTCCAT...CCATCTCAGGCCAGAGCCAAGGGGCTTCAGGTCCAGGCTGTGTTTGGCTTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR GCA 90 bp GAACTGTGTTGTGTCTGTTGTCATGGAAACGATGGCAAAGCCACAGAGTCAATGACAGCACAGCCCATGTaGGCACACAGCGTCCGGCTT +
Preference number: 4 (lower is better)
Translates to: ELCCVCCHGNDGKATESMTAQPM*AHSVRL
Trigger: AAGCCGGACGCTGTGTGCGCACATGGGCTGTGCTGT...CATTGACTCTGTGGCTTTGCCATCGTTTCCATGACAACAGACACAACACAGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR GCA 90 bp ATTGCCATTCAGTTTGCTTGGATGGAGATGGAATGGGTGGCAGGGTCTCTGATAAGTTGCTGGAGTCCCTaGACGCTGTTCCTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: IAIQFAWMEMEWVAGSLISCWSP*TLFLQA
Trigger: AGCCTGCAGGAACAGCGTGCAGGGACTCCAGCAACT...TATCAGAGACCCTGCCACCCATTCCATCTCCATCCAAGCAAACTGAATGGCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR GCA 90 bp AATGTCCCCCAGCAGCCTGTCATTGTGTGTGAAACTCCTAGCCTGAGAGCCCCAAGACTTTGCCACAGTTaGCATAAGGATCACCTGCAG +
Preference number: 4 (lower is better)
Translates to: NVPQQPVIVCETPSLRAPRLCHS*HKDHLQ
Trigger: CTGCAGGTGATCCTTATGGCAACTGTGGCAAAGTCT...TGGGGCTCTCAGGCTAGGAGTTTCACACACAATGACAGGCTGCTGGGGGACATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR GCA 90 bp GCCCCGAGAACTGTGTTGTGTCTGTTGTCATGGAAACGATGGCAAAGCCACAGAAGAATCCGGCCTCCTTaGTGCAGGGGGATGTTTGTT +
Preference number: 4 (lower is better)
Translates to: APRTVLCLLSWKRWQSHRRIRPP*CRGMFV
Trigger: AACAAACATCCCCCTGCAGCAAGGAGGCCGGATTCT...TCTGTGGCTTTGCCATCGTTTCCATGACAACAGACACAACACAGTTCTCGGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR GCA 90 bp CTCTCAGGAGCAGCACTGAAGCATGTCCATGTTTTAGCAGAAGCTCAACCAGGAAGTTCTTCCTGTTGTTaGACACCCCTCTGCCGTGGC +
Preference number: 4 (lower is better)
Translates to: LSGAALKHVHVLAEAQPGSSSCC*TPLCRG
Trigger: GCCACGGCAGAGGGGTGTGCAACAACAGGAAGAACT...TCCTGGTTGAGCTTCTGCTAAAACATGGACATGCTTCAGTGCTGCTCCTGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR GCA 90 bp CTGAAAGCCAAACACAGCCTGGACCTGAAGCCCCTTGGCTCTGGCCTGAGATGGCAGTTTGTGGTGATTTaGTCAGCTCCAAGCAGTATA +
Preference number: 4 (lower is better)
Translates to: LKAKHSLDLKPLGSGLRWQFVVI*SAPSSI
Trigger: TATACTGCTTGGAGCTGAGCAAATCACCACAAACTG...CCATCTCAGGCCAGAGCCAAGGGGCTTCAGGTCCAGGCTGTGTTTGGCTTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR GCA 90 bp CTGAAAGCCAAACACAGCCTGGACCTGAAGCCCCTTGGCTCTGGCCTGAGATGGTTCGTTTCCCTCGGTTaGTACACATCTGATTACATG +
Preference number: 4 (lower is better)
Translates to: LKAKHSLDLKPLGSGLRWFVSLG*YTSDYM
Trigger: CATGTAATCAGATGTGTAGCAACCGAGGGAAACGAA...CCATCTCAGGCCAGAGCCAAGGGGCTTCAGGTCCAGGCTGTGTTTGGCTTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR GCA 90 bp CTGGCGCCACCTTGTGCCCTTTCTGCTGCTGGGGGTCTCATTGGCTCAGAGTGCATTGATGTATTGATTTaGCTGGGAACAATGGCCTAT +
Preference number: 4 (lower is better)
Translates to: LAPPCALSAAGGLIGSECIDVLI*LGTMAY
Trigger: ATAGGCCATTGTTCCCAGGCAAATCAATACATCAAT...GCACTCTGAGCCAATGAGACCCCCAGCAGCAGAAAGGGCACAAGGTGGCGCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CCA 90 bp TGTGGTGATTTGCTCAGCTCCAAGCAGTATAGGGAGGTGGCGGTTTGCAGTGCCCCATGTCTGAGAGGGTaGTGGAAACACATTCTTTGC +
Preference number: 4 (lower is better)
Translates to: CGDLLSSKQYREVAVCSAPCLRG*WKHILC
Trigger: GCAAAGAATGTGTTTCCACCACCCTCTCAGACATGG...GGCACTGCAAACCGCCACCTCCCTATACTGCTTGGAGCTGAGCAAATCACCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CCA 90 bp GTCCACAGCAAAGAGCCAGAGTTCACCGCCCTTTCTCCTACCTTCTTCTCCAGTAGCTGCGCATTGTCATaGGATTTGCGAGGTAGAAGC +
Preference number: 4 (lower is better)
Translates to: VHSKEPEFTALSPTFFSSSCALS*DLRGRS
Trigger: GCTTCTACCTCGCAAATCCCATGACAATGCGCAGCT...ACTGGAGAAGAAGGTAGGAGAAAGGGCGGTGAACTCTGGCTCTTTGCTGTGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR CCA 90 bp ATCCTGGTGTGGCTACACCTTAAGATTCCTGTCTGCAACCCAGGTTCTCACCAAGGGCCATGCCGATGGTaGTCCCTTGGAAATAAACCC +
Preference number: 4 (lower is better)
Translates to: ILVWLHLKIPVCNPGSHQGPCRW*SLGNKP
Trigger: GGGTTTATTTCCAAGGGACCACCATCGGCATGGCCC...TTGGTGAGAACCTGGGTTGCAGACAGGAATCTTAAGGTGTAGCCACACCAGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CCA 90 bp ACTGAAGCATGTCCATGTTTTAGCAGAAGCTCAACCAGGAAGTCGCTGCCCTTCACAATTCCCCCAGACTaGTCTGCCGTGCACATGCTC +
Preference number: 4 (lower is better)
Translates to: TEACPCFSRSSTRKSLPFTIPPD*SAVHML
Trigger: GAGCATGTGCACGGCAGACCAGTCTGGGGGAATTGT...GAAGGGCAGCGACTTCCTGGTTGAGCTTCTGCTAAAACATGGACATGCTTCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR CCA 90 bp GCCCCGAGAACTGTGTTGTGTCTGTTGTCATGGAAACGATGGCAAAGCCACAGATTCATCCCGAAATTGTaGCCCAGCTCATGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: APRTVLCLLSWKRWQSHRFIPKL*PSSCAR
Trigger: CCTGGCACATGAGCTGGGCCACAATTTCGGGATGAA...TCTGTGGCTTTGCCATCGTTTCCATGACAACAGACACAACACAGTTCTCGGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR CCA 90 bp CTGAGCCCCGAGAACTGTGTTGTGTCTGTTGTCATGGAAACGATGGCAAAGCCAGAACACCATGGGAAATaGGTACCCGGTGGAAGCGTT +
Preference number: 4 (lower is better)
Translates to: LSPENCVVSVVMETMAKPEHHGK*VPGGSV
Trigger: AACGCTTCCACCGGGTACCCATTTCCCATGGTGTTC...TGGCTTTGCCATCGTTTCCATGACAACAGACACAACACAGTTCTCGGGGCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR CCA 90 bp GATTCTACTTGGGATCTCTTGAGCTGCATCTGGTACCATAAGCACAGCTGGGGGTCAGGGTACAGGTGGTaGCATTGCAGCAGCGATTCA +
Preference number: 4 (lower is better)
Translates to: DSTWDLLSCIWYHKHSWGSGYRW*HCSSDS
Trigger: TGAATCGCTGCTGCAATGCCACCACCTGTACCCTGA...CCCCCAGCTGTGCTTATGGTACCAGATGCAGCTCAAGAGATCCCAAGTAGAATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CCA 90 bp TTTCATTGCCATTCAGTTTGCTTGGATGGAGATGGAATGGGTGGCAGGGTCTCTGGTCACAGGAGTTGCTaGAGTCCCTGCACGCTGTTC +
Preference number: 4 (lower is better)
Translates to: FHCHSVCLDGDGMGGRVSGHRSC*SPCTLF
Trigger: GAACAGCGTGCAGGGACTCCAGCAACTCCTGTGACC...AGAGACCCTGCCACCCATTCCATCTCCATCCAAGCAAACTGAATGGCAATGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR CCA 90 bp ATCCTGGTGTGGCTACACCTTAAGATTCCTGTCTGCAACCCAGGTTCTCACCAACCCTGTGCAGAACTCTaGGAGGTCACAGGAGTTGCT +
Preference number: 4 (lower is better)
Translates to: ILVWLHLKIPVCNPGSHQPCAEL*EVTGVA
Trigger: AGCAACTCCTGTGACCTCCCAGAGTTCTGCACAGGG...TTGGTGAGAACCTGGGTTGCAGACAGGAATCTTAAGGTGTAGCCACACCAGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CCA 90 bp TTTCATTGCCATTCAGTTTGCTTGGATGGAGATGGAATGGGTGGCAGGGTCTCTGGCAGGTTTAGCACCTaGTCCCCAGAGCGTGACACA +
Preference number: 4 (lower is better)
Translates to: FHCHSVCLDGDGMGGRVSGRFST*SPERDT
Trigger: TGTGTCACGCTCTGGGGACCAGGTGCTAAACCTGCC...AGAGACCCTGCCACCCATTCCATCTCCATCCAAGCAAACTGAATGGCAATGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR CCA 90 bp GAACTGTGTTGTGTCTGTTGTCATGGAAACGATGGCAAAGCCACAGAGTCAATGTGCAAGCACAAGCCCTaGGTCCGGCATGTCATCGCC +
Preference number: 4 (lower is better)
Translates to: ELCCVCCHGNDGKATESMCKHKP*VRHVIA
Trigger: GGCGATGACATGCCGGACCCAGGGCTTGTGCTTGCA...CATTGACTCTGTGGCTTTGCCATCGTTTCCATGACAACAGACACAACACAGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR CCA 90 bp TCCCTGGCTTTCTGCAAACCCTCAAACCTGAGTACTGCTGGTCACGCATGTCCAAAACCTGAGTACTGCTaGTCACGCATGTCCACAGCA +
Preference number: 4 (lower is better)
Translates to: SLAFCKPSNLSTAGHACPKPEYC*SRMSTA
Trigger: TGCTGTGGACATGCGTGACCAGCAGTACTCAGGTTT...TGGACATGCGTGACCAGCAGTACTCAGGTTTGAGGGTTTGCAGAAAGCCAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR CCA 90 bp CAGCAAAGAGCCAGAGTTCACCGCCCTTTCTCCTACCTTCTTCTCCAGTTTGTTGGGTTGGTGACTCTGTaGGTTCCCTGGCTTTCTGCA +
Preference number: 4 (lower is better)
Translates to: QQRARVHRPFSYLLLQFVGLVTL*VPWLSA
Trigger: TGCAGAAAGCCAGGGAACCCACAGAGTCACCAACCC...AACAAACTGGAGAAGAAGGTAGGAGAAAGGGCGGTGAACTCTGGCTCTTTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR CCA 90 bp GATTCTACTTGGGATCTCTTGAGCTGCATCTGGTACCATAAGCACAGCTGGGGGACTGCAGCAATCTCCTaGGATTGTCCTTCGGTGGGT +
Preference number: 4 (lower is better)
Translates to: DSTWDLLSCIWYHKHSWGTAAIS*DCPSVG
Trigger: ACCCACCGAAGGACAATCCCAGGAGATTGCTGCAGT...CCCCCAGCTGTGCTTATGGTACCAGATGCAGCTCAAGAGATCCCAAGTAGAATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CCA 90 bp AATGTCCCCCAGCAGCCTGTCATTGTGTGTGAAACTCCTAGCCTGAGAGCCCCATTCCTGCAGCCAAGTTaGAAAAAGAGGATGCCCCAT +
Preference number: 4 (lower is better)
Translates to: NVPQQPVIVCETPSLRAPFLQPS*KKRMPH
Trigger: ATGGGGCATCCTCTTTTTCCAACTTGGCTGCAGGAA...TGGGGCTCTCAGGCTAGGAGTTTCACACACAATGACAGGCTGCTGGGGGACATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CCA 90 bp GATTCTACTTGGGATCTCTTGAGCTGCATCTGGTACCATAAGCACAGCTGGGGGCTTAGTAAACATCAGTaGCGAGGGGGCAGGAGGATG +
Preference number: 4 (lower is better)
Translates to: DSTWDLLSCIWYHKHSWGLSKHQ*RGGRRM
Trigger: CATCCTCCTGCCCCCTCGCCACTGATGTTTACTAAG...CCCCCAGCTGTGCTTATGGTACCAGATGCAGCTCAAGAGATCCCAAGTAGAATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CCA 90 bp ATCCTGGTGTGGCTACACCTTAAGATTCCTGTCTGCAACCCAGGTTCTCACCAAAGATGCATCGGCCTGTaGTTTGACCTGGGAAAGGGG +
Preference number: 4 (lower is better)
Translates to: ILVWLHLKIPVCNPGSHQRCIGL*FDLGKG
Trigger: CCCCTTTCCCAGGTCAAACCACAGGCCGATGCATCT...TTGGTGAGAACCTGGGTTGCAGACAGGAATCTTAAGGTGTAGCCACACCAGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR TCA 90 bp CAAACCCTCAAACCTGAGTACTGCTGGTCACGCATGTCCACAGCAAAGAGCCAGAGGTTTGGTGTGTTGTaGTGTGATCCACATGATCCC +
Preference number: 4 (lower is better)
Translates to: QTLKPEYCWSRMSTAKSQRFGVL*CDPHDP
Trigger: GGGATCATGTGGATCACATCACAACACACCAAACCT...CTGGCTCTTTGCTGTGGACATGCGTGACCAGCAGTACTCAGGTTTGAGGGTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR TCA 90 bp CTGAGCCCCGAGAACTGTGTTGTGTCTGTTGTCATGGAAACGATGGCAAAGCCAATTCATGGAGGCTGGTaGATGGGTCCTGACTTACAG +
Preference number: 4 (lower is better)
Translates to: LSPENCVVSVVMETMAKPIHGGW*MGPDLQ
Trigger: CTGTAAGTCAGGACCCATTCACCAGCCTCCATGAAT...TGGCTTTGCCATCGTTTCCATGACAACAGACACAACACAGTTCTCGGGGCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR TCA 90 bp GTCCACAGCAAAGAGCCAGAGTTCACCGCCCTTTCTCCTACCTTCTTCTCCAGTCTGTCCAGTGTGTCATaGTTCATCCCGAAATTGTGG +
Preference number: 4 (lower is better)
Translates to: VHSKEPEFTALSPTFFSSLSSVS*FIPKLW
Trigger: CCACAATTTCGGGATGAATCATGACACACTGGACAG...ACTGGAGAAGAAGGTAGGAGAAAGGGCGGTGAACTCTGGCTCTTTGCTGTGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR TCA 90 bp CCTGCTACTCTCTCAGGAGCAGCACTGAAGCATGTCCATGTTTTAGCAGAAGCTCGGTGGAAGCGTTCATaGTGCAGCCTCCTTTCTCAA +
Preference number: 4 (lower is better)
Translates to: PATLSGAALKHVHVLAEARWKRS*CSLLSQ
Trigger: TTGAGAAAGGAGGCTGCATCATGAACGCTTCCACCG...AGCTTCTGCTAAAACATGGACATGCTTCAGTGCTGCTCCTGAGAGAGTAGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR TCA 90 bp TGTGTCTGTTGTCATGGAAACGATGGCAAAGCCACAGAGTCAATGCTGCCAGTCTCCTGCTGCAACTGCTaGACACCATGGGAAATGGGT +
Preference number: 4 (lower is better)
Translates to: CVCCHGNDGKATESMLPVSCCNC*TPWEMG
Trigger: ACCCATTTCCCATGGTGTTCAGCAGTTGCAGCAGGA...GACTGGCAGCATTGACTCTGTGGCTTTGCCATCGTTTCCATGACAACAGACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR TCA 90 bp CTATTTTATGCAGTAATGGCCACGGGGGATGGAGTTAGGCTCTTACATTGTTTTCTGGTCCCCAGAGCGTaGCACACTGCTGCTCGTGAG +
Preference number: 4 (lower is better)
Translates to: LFYAVMATGDGVRLLHCFLVPRA*HTAARE
Trigger: CTCACGAGCAGCAGTGTGTCACGCTCTGGGGACCAG...AAAACAATGTAAGAGCCTAACTCCATCCCCCGTGGCCATTACTGCATAAAATAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR TCA 90 bp TGTGTCTGTTGTCATGGAAACGATGGCAAAGCCACAGAGTCAATGCTGCCAGTCGCAAACCCTCAAACCTaGGTACTGCTGGTCACGCAT +
Preference number: 4 (lower is better)
Translates to: CVCCHGNDGKATESMLPVANPQT*VLLVTH
Trigger: ATGCGTGACCAGCAGTACTCAGGTTTGAGGGTTTGC...GACTGGCAGCATTGACTCTGTGGCTTTGCCATCGTTTCCATGACAACAGACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR TCA 90 bp CTGAAAGCCAAACACAGCCTGGACCTGAAGCCCCTTGGCTCTGGCCTGAGATGGATCCAGAAAATCAACTaGGATTCTACTTGGGATCTC +
Preference number: 4 (lower is better)
Translates to: LKAKHSLDLKPLGSGLRWIQKIN*DSTWDL
Trigger: GAGATCCCAAGTAGAATCTCAGTTGATTTTCTGGAT...CCATCTCAGGCCAGAGCCAAGGGGCTTCAGGTCCAGGCTGTGTTTGGCTTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR TCA 90 bp CTGAAAGCCAAACACAGCCTGGACCTGAAGCCCCTTGGCTCTGGCCTGAGATGGACTCGTCAGGAGTATTaGCTCTCCTACAGTTTAATT +
Preference number: 4 (lower is better)
Translates to: LKAKHSLDLKPLGSGLRWTRQEY*LSYSLI
Trigger: AATTAAACTGTAGGAGAGTCAATACTCCTGACGAGT...CCATCTCAGGCCAGAGCCAAGGGGCTTCAGGTCCAGGCTGTGTTTGGCTTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR GCA 90 bp TTGTTAAATGAAGGGTTGGTGACTCTGTGGGTTCCCTGGCTTTCTGCAAACCCTTCCCCCAGACTGGTCTaGCGTGCACATGCTCATGAT +
Preference number: 4 (lower is better)
Translates to: LLNEGLVTLWVPWLSANPSPRLV*RAHAHD
Trigger: ATCATGAGCATGTGCACGGCAGACCAGTCTGGGGGA...AGGGTTTGCAGAAAGCCAGGGAACCCACAGAGTCACCAACCCTTCATTTAACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR GCA 90 bp TGTGGTGATTTGCTCAGCTCCAAGCAGTATAGGGAGGTGGCGGTTTGCAGTGCCTACAGGTGGTGGCATTaGAGCAGCGATTCATACATT +
Preference number: 4 (lower is better)
Translates to: CGDLLSSKQYREVAVCSAYRWWH*SSDSYI
Trigger: AATGTATGAATCGCTGCTGCAATGCCACCACCTGTA...GGCACTGCAAACCGCCACCTCCCTATACTGCTTGGAGCTGAGCAAATCACCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR GCA 90 bp ATCCTGGTGTGGCTACACCTTAAGATTCCTGTCTGCAACCCAGGTTCTCACCAACGTGAGTCTGGCAGATaGCATTGTAGCAGTAGCCGT +
Preference number: 4 (lower is better)
Translates to: ILVWLHLKIPVCNPGSHQRESGR*HCSSSR
Trigger: ACGGCTACTGCTACAATGGCATCTGCCAGACTCACG...TTGGTGAGAACCTGGGTTGCAGACAGGAATCTTAAGGTGTAGCCACACCAGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR GCA 90 bp CAGCAAAGAGCCAGAGTTCACCGCCCTTTCTCCTACCTTCTTCTCCAGTTTGTTATCCGGCCTCCTTGCTaGAGGGGGATGTTTGTTTCT +
Preference number: 4 (lower is better)
Translates to: QQRARVHRPFSYLLLQFVIRPPC*RGMFVS
Trigger: AGAAACAAACATCCCCCTGCAGCAAGGAGGCCGGAT...AACAAACTGGAGAAGAAGGTAGGAGAAAGGGCGGTGAACTCTGGCTCTTTGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR GCA 90 bp ATCCTGGTGTGGCTACACCTTAAGATTCCTGTCTGCAACCCAGGTTCTCACCAACATCTGCACACTTTGTaGCTGCAAGCACAAGCCCTG +
Preference number: 4 (lower is better)
Translates to: ILVWLHLKIPVCNPGSHQHLHTL*LQAQAL
Trigger: CAGGGCTTGTGCTTGCAGGCACAAAGTGTGCAGATG...TTGGTGAGAACCTGGGTTGCAGACAGGAATCTTAAGGTGTAGCCACACCAGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR GCA 90 bp ATTGCCATTCAGTTTGCTTGGATGGAGATGGAATGGGTGGCAGGGTCTCTGATAAAGCCACAGAGTCAATaGTGCCAGTCACAGGAGGCC +
Preference number: 4 (lower is better)
Translates to: IAIQFAWMEMEWVAGSLIKPQSQ*CQSQEA
Trigger: GGCCTCCTGTGACTGGCAGCATTGACTCTGTGGCTT...TATCAGAGACCCTGCCACCCATTCCATCTCCATCCAAGCAAACTGAATGGCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR GCA 90 bp TTTCATTGCCATTCAGTTTGCTTGGATGGAGATGGAATGGGTGGCAGGGTCTCTGTCGCTGCCCTTCCTTaGACTGTTTCTGCAGACGTG +
Preference number: 4 (lower is better)
Translates to: FHCHSVCLDGDGMGGRVSVAALP*TVSADV
Trigger: CACGTCTGCAGAAACAGTGCAAGGAAGGGCAGCGAC...AGAGACCCTGCCACCCATTCCATCTCCATCCAAGCAAACTGAATGGCAATGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR GCA 90 bp TGTTTCATTGCCATTCAGTTTGCTTGGATGGAGATGGAATGGGTGGCAGGGTCTGCCAGAGTGGTAACCTaGTACTCTCTCAGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: CFIAIQFAWMEMEWVAGSARVVT*YSLRSS
Trigger: GCTGCTCCTGAGAGAGTAGCAGGTTACCACTCTGGC...AGACCCTGCCACCCATTCCATCTCCATCCAAGCAAACTGAATGGCAATGAAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR GCA 90 bp TCCACAGCAAAGAGCCAGAGTTCACCGCCCTTTCTCCTACCTTCTTCTCCAGTTCTCAAACCTGAGTACTaGTGGTCACGCATGTCCACA +
Preference number: 4 (lower is better)
Translates to: STAKSQSSPPFLLPSSPVLKPEY*WSRMST
Trigger: TGTGGACATGCGTGACCAGCAGTACTCAGGTTTGAG...AACTGGAGAAGAAGGTAGGAGAAAGGGCGGTGAACTCTGGCTCTTTGCTGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR GCA 90 bp TGTGGTGATTTGCTCAGCTCCAAGCAGTATAGGGAGGTGGCGGTTTGCAGTGCCTGGAAACATCCTCACTaGACAGAAATGGTTCTCAGC +
Preference number: 4 (lower is better)
Translates to: CGDLLSSKQYREVAVCSAWKHPH*TEMVLS
Trigger: GCTGAGAACCATTTCTGTGCAGTGAGGATGTTTCCA...GGCACTGCAAACCGCCACCTCCCTATACTGCTTGGAGCTGAGCAAATCACCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR GCA 90 bp CTGAAAGCCAAACACAGCCTGGACCTGAAGCCCCTTGGCTCTGGCCTGAGATGGTGTTTTTCCTATATCTaGCCTACTAAGGTACCTGCT +
Preference number: 4 (lower is better)
Translates to: LKAKHSLDLKPLGSGLRWCFSYI*PTKVPA
Trigger: AGCAGGTACCTTAGTAGGGCAGATATAGGAAAAACA...CCATCTCAGGCCAGAGCCAAGGGGCTTCAGGTCCAGGCTGTGTTTGGCTTTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CCA 90 bp TGTGGTGATTTGCTCAGCTCCAAGCAGTATAGGGAGGTGGCGGTTTGCAGTGCCCTTCTGGATGATTCTTaGAGTCGAAGCTCTTCACTG +
Preference number: 4 (lower is better)
Translates to: CGDLLSSKQYREVAVCSALLDDS*SRSSSL
Trigger: CAGTGAAGAGCTTCGACTCCAAGAATCATCCAGAAG...GGCACTGCAAACCGCCACCTCCCTATACTGCTTGGAGCTGAGCAAATCACCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CCA 90 bp CTGAGCCCCGAGAACTGTGTTGTGTCTGTTGTCATGGAAACGATGGCAAAGCCAATGGAGGCTGGTGAATaGGTCCTGACTTACAGAGCA +
Preference number: 4 (lower is better)
Translates to: LSPENCVVSVVMETMAKPMEAGE*VLTYRA
Trigger: TGCTCTGTAAGTCAGGACCCATTCACCAGCCTCCAT...TGGCTTTGCCATCGTTTCCATGACAACAGACACAACACAGTTCTCGGGGCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR CCA 90 bp ATCCTGGTGTGGCTACACCTTAAGATTCCTGTCTGCAACCCAGGTTCTCACCAAGAACACCATGGGAAATaGGTACCCGGTGGAAGCGTT +
Preference number: 4 (lower is better)
Translates to: ILVWLHLKIPVCNPGSHQEHHGK*VPGGSV
Trigger: AACGCTTCCACCGGGTACCCATTTCCCATGGTGTTC...TTGGTGAGAACCTGGGTTGCAGACAGGAATCTTAAGGTGTAGCCACACCAGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CCA 90 bp AATGTCCCCCAGCAGCCTGTCATTGTGTGTGAAACTCCTAGCCTGAGAGCCCCACTCTCATCTCGCATTTaGCAAAGGAACTCTTCGAGA +
Preference number: 4 (lower is better)
Translates to: NVPQQPVIVCETPSLRAPLSSRI*QRNSSR
Trigger: TCTCGAAGAGTTCCTTTGCCAAATGCGAGATGAGAG...TGGGGCTCTCAGGCTAGGAGTTTCACACACAATGACAGGCTGCTGGGGGACATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CCA 90 bp TTGTTAAATGAAGGGTTGGTGACTCTGTGGGTTCCCTGGCTTTCTGCAAACCCTATTGGTACCAATGACTaGCCGGCTGGCACCTCCTTG +
Preference number: 4 (lower is better)
Translates to: LLNEGLVTLWVPWLSANPIGTND*PAGTSL
Trigger: CAAGGAGGTGCCAGCCGGCCAGTCATTGGTACCAAT...AGGGTTTGCAGAAAGCCAGGGAACCCACAGAGTCACCAACCCTTCATTTAACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR CCA 90 bp ACTGAAGCATGTCCATGTTTTAGCAGAAGCTCAACCAGGAAGTCGCTGCCCTTCACGGTCTCCATGTCATaGGAGGGCTCAGATGAGTGT +
Preference number: 4 (lower is better)
Translates to: TEACPCFSRSSTRKSLPFTVSMS*EGSDEC
Trigger: ACACTCATCTGAGCCCTCCCATGACATGGAGACCGT...GAAGGGCAGCGACTTCCTGGTTGAGCTTCTGCTAAAACATGGACATGCTTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR CCA 90 bp TGTGGTGATTTGCTCAGCTCCAAGCAGTATAGGGAGGTGGCGGTTTGCAGTGCCCAAGAAGACACAGGATaGTCACCAGAATTCCTATGG +
Preference number: 4 (lower is better)
Translates to: CGDLLSSKQYREVAVCSAQEDTG*SPEFLW
Trigger: CCATAGGAATTCTGGTGACCATCCTGTGTCTTCTTG...GGCACTGCAAACCGCCACCTCCCTATACTGCTTGGAGCTGAGCAAATCACCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CCA 90 bp TTTCCAGGTGATGGCCCTACAAAACTCAAACCACCTCTATTATTCATGCCTATATTGGAAGCCACGGGGTaGCCGGGAAGGGCGCACACA +
Preference number: 4 (lower is better)
Translates to: FPGDGPTKLKPPLLFMPILEATG*PGRAHT
Trigger: TGTGTGCGCCCTTCCCGGCCACCCCGTGGCTTCCAA...TATAGGCATGAATAATAGAGGTGGTTTGAGTTTTGTAGGGCCATCACCTGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CCA 90 bp GATTCTACTTGGGATCTCTTGAGCTGCATCTGGTACCATAAGCACAGCTGGGGGCTCTTGAGCTGCATCTaGTACCATAAGCACAGCTGG +
Preference number: 4 (lower is better)
Translates to: DSTWDLLSCIWYHKHSWGLLSCI*YHKHSW
Trigger: CCAGCTGTGCTTATGGTACCAGATGCAGCTCAAGAG...CCCCCAGCTGTGCTTATGGTACCAGATGCAGCTCAAGAGATCCCAAGTAGAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CCA 90 bp ATCCTGGTGTGGCTACACCTTAAGATTCCTGTCTGCAACCCAGGTTCTCACCAAGCCATGGCCCCTAAGTaGCCATTGATGACATGGCAT +
Preference number: 4 (lower is better)
Translates to: ILVWLHLKIPVCNPGSHQAMAPK*PLMTWH
Trigger: ATGCCATGTCATCAATGGCCACTTAGGGGCCATGGC...TTGGTGAGAACCTGGGTTGCAGACAGGAATCTTAAGGTGTAGCCACACCAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR CAA 72 bp CTGGGGGTAGTTGGGGGACTGCTTTCCAATAAGGCCTaGATCAGAAAGCAAACACATCCTGTCCAGAATCCC +
Preference number: 4 (lower is better)
Translates to: LGVVGGLLSNKA*IRKQTHPVQNP
Trigger: GGGATTCTGGACAGGATGTGTTTGCTTTCTGATCAAGGCCTTATTGGAAAGCAGTCCCCCAACTACCCCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR TCA 90 bp GATTCTACTTGGGATCTCTTGAGCTGCATCTGGTACCATAAGCACAGCTGGGGGGACCGTTGCAATAAATaGGCAAACTGTCCGAGTTGG +
Preference number: 4 (lower is better)
Translates to: DSTWDLLSCIWYHKHSWGDRCNK*ANCPSW
Trigger: CCAACTCGGACAGTTTGCTCATTTATTGCAACGGTC...CCCCCAGCTGTGCTTATGGTACCAGATGCAGCTCAAGAGATCCCAAGTAGAATC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR TCA 90 bp CAGCAAAGAGCCAGAGTTCACCGCCCTTTCTCCTACCTTCTTCTCCAGTTTGTTGCTGAGACTGACTGCTaGATCAGAATATCCCCGTAC +
Preference number: 4 (lower is better)
Translates to: QQRARVHRPFSYLLLQFVAETDC*IRISPY
Trigger: GTACGGGGATATTCTGATTCAGCAGTCAGTCTCAGC...AACAAACTGGAGAAGAAGGTAGGAGAAAGGGCGGTGAACTCTGGCTCTTTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR TCA 90 bp ATCCTGGTGTGGCTACACCTTAAGATTCCTGTCTGCAACCCAGGTTCTCACCAACTGGTGAATGGGTCCTaGCTTACAGAGCATTTGTCC +
Preference number: 4 (lower is better)
Translates to: ILVWLHLKIPVCNPGSHQLVNGS*LTEHLS
Trigger: GGACAAATGCTCTGTAAGTCAGGACCCATTCACCAG...TTGGTGAGAACCTGGGTTGCAGACAGGAATCTTAAGGTGTAGCCACACCAGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR TCA 90 bp GATTCTACTTGGGATCTCTTGAGCTGCATCTGGTACCATAAGCACAGCTGGGGGCTGTCCAGTGTGTCATaGTTCATCCCGAAATTGTGG +
Preference number: 4 (lower is better)
Translates to: DSTWDLLSCIWYHKHSWGLSSVS*FIPKLW
Trigger: CCACAATTTCGGGATGAATCATGACACACTGGACAG...CCCCCAGCTGTGCTTATGGTACCAGATGCAGCTCAAGAGATCCCAAGTAGAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR TCA 90 bp GATTCTACTTGGGATCTCTTGAGCTGCATCTGGTACCATAAGCACAGCTGGGGGGATCACCTGCAGAATTaGCTCTCTCAAAGCAGATCC +
Preference number: 4 (lower is better)
Translates to: DSTWDLLSCIWYHKHSWGDHLQN*LSQSRS
Trigger: GGATCTGCTTTGAGAGAGTCAATTCTGCAGGTGATC...CCCCCAGCTGTGCTTATGGTACCAGATGCAGCTCAAGAGATCCCAAGTAGAATC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR TCA 90 bp ATGGAAACGATGGCAAAGCCACAGAGTCAATGCTGCCAGTCACAGGAGGCCTTGTGCATTGCACACTCGTaGACCCCAAAGACACTAATA +
Preference number: 4 (lower is better)
Translates to: METMAKPQSQCCQSQEALCIAHS*TPKTLI
Trigger: TATTAGTGTCTTTGGGGTTCACGAGTGTGCAATGCA...CAAGGCCTCCTGTGACTGGCAGCATTGACTCTGTGGCTTTGCCATCGTTTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR TCA 90 bp TTTCCAGGTGATGGCCCTACAAAACTCAAACCACCTCTATTATTCATGCCTATAAACACAGCCTGGACCTaGAGCCCCTTGGCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: FPGDGPTKLKPPLLFMPINTAWT*SPLALA
Trigger: GGCCAGAGCCAAGGGGCTTCAGGTCCAGGCTGTGTT...TATAGGCATGAATAATAGAGGTGGTTTGAGTTTTGTAGGGCCATCACCTGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR TCA 90 bp TGTGGTGATTTGCTCAGCTCCAAGCAGTATAGGGAGGTGGCGGTTTGCAGTGCCACTCTCCTGGCTCTCTaGAATAGAAGCATAGGAATT +
Preference number: 4 (lower is better)
Translates to: CGDLLSSKQYREVAVCSATLLAL*NRSIGI
Trigger: AATTCCTATGCTTCTATTTCAGAGAGCCAGGAGAGT...GGCACTGCAAACCGCCACCTCCCTATACTGCTTGGAGCTGAGCAAATCACCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR TCA 90 bp AATGTCCCCCAGCAGCCTGTCATTGTGTGTGAAACTCCTAGCCTGAGAGCCCCAGATGCATTGATGTATTaGTTTGCCTGGGAACAATGG +
Preference number: 4 (lower is better)
Translates to: NVPQQPVIVCETPSLRAPDALMY*FAWEQW
Trigger: CCATTGTTCCCAGGCAAATCAATACATCAATGCATC...TGGGGCTCTCAGGCTAGGAGTTTCACACACAATGACAGGCTGCTGGGGGACATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR TCA 90 bp CTGAAAGCCAAACACAGCCTGGACCTGAAGCCCCTTGGCTCTGGCCTGAGATGGAAAGCAGTTTTGAAATaGGTAGTACATCTCACGAAG +
Preference number: 4 (lower is better)
Translates to: LKAKHSLDLKPLGSGLRWKAVLK*VVHLTK
Trigger: CTTCGTGAGATGTACTACTCATTTCAAAACTGCTTT...CCATCTCAGGCCAGAGCCAAGGGGCTTCAGGTCCAGGCTGTGTTTGGCTTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR TCA 90 bp TGTGGTGATTTGCTCAGCTCCAAGCAGTATAGGGAGGTGGCGGTTTGCAGTGCCAGTCACCACTTTGGCTaGTCTAAAGTAGCAATGGAA +
Preference number: 4 (lower is better)
Translates to: CGDLLSSKQYREVAVCSASHHFG*SKVAME
Trigger: TTCCATTGCTACTTTAGATCAGCCAAAGTGGTGACT...GGCACTGCAAACCGCCACCTCCCTATACTGCTTGGAGCTGAGCAAATCACCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR GCA 90 bp GATTCTACTTGGGATCTCTTGAGCTGCATCTGGTACCATAAGCACAGCTGGGGGTCTTTTATGCCTTCTTaGCCATGTCTGAGAGGGTGG +
Preference number: 4 (lower is better)
Translates to: DSTWDLLSCIWYHKHSWGSFMPS*PCLRGW
Trigger: CCACCCTCTCAGACATGGGCAAGAAGGCATAAAAGA...CCCCCAGCTGTGCTTATGGTACCAGATGCAGCTCAAGAGATCCCAAGTAGAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR GCA 90 bp TGTCCACAGCAAAGAGCCAGAGTTCACCGCCCTTTCTCCTACCTTCTTCTCCAGTACAGGTGGTGGCATTaGAGCAGCGATTCATACATT +
Preference number: 4 (lower is better)
Translates to: CPQQRARVHRPFSYLLLQYRWWH*SSDSYI
Trigger: AATGTATGAATCGCTGCTGCAATGCCACCACCTGTA...CTGGAGAAGAAGGTAGGAGAAAGGGCGGTGAACTCTGGCTCTTTGCTGTGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR GCA 90 bp TTTCCAGGTGATGGCCCTACAAAACTCAAACCACCTCTATTATTCATGCCTATAGAGGGCTGGCCCCTGTaGAGAACTCTGGGAGGTCAC +
Preference number: 4 (lower is better)
Translates to: FPGDGPTKLKPPLLFMPIEGWPL*RTLGGH
Trigger: GTGACCTCCCAGAGTTCTGCACAGGGGCCAGCCCTC...TATAGGCATGAATAATAGAGGTGGTTTGAGTTTTGTAGGGCCATCACCTGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR GCA 90 bp TCCACAGCAAAGAGCCAGAGTTCACCGCCCTTTCTCCTACCTTCTTCTCCAGTTAGACTTTGCCACAGTTaGCATAAGGATCACCTGCAG +
Preference number: 4 (lower is better)
Translates to: STAKSQSSPPFLLPSSPVRLCHS*HKDHLQ
Trigger: CTGCAGGTGATCCTTATGGCAACTGTGGCAAAGTCT...AACTGGAGAAGAAGGTAGGAGAAAGGGCGGTGAACTCTGGCTCTTTGCTGTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR GCA 90 bp GAACTGTGTTGTGTCTGTTGTCATGGAAACGATGGCAAAGCCACAGAGTCAATGTGGGGCCGCTGTCTGTaGTTCCTCCAAAGCCAAACT +
Preference number: 4 (lower is better)
Translates to: ELCCVCCHGNDGKATESMWGRCL*FLQSQT
Trigger: AGTTTGGCTTTGGAGGAAGCACAGACAGCGGCCCCA...CATTGACTCTGTGGCTTTGCCATCGTTTCCATGACAACAGACACAACACAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR GCA 90 bp TCCCTGGCTTTCTGCAAACCCTCAAACCTGAGTACTGCTGGTCACGCATGTCCAATCAGAGCATTAAGTTaGAGCCAGAGACCAGTCATC +
Preference number: 4 (lower is better)
Translates to: SLAFCKPSNLSTAGHACPIRALS*SQRPVI
Trigger: GATGACTGGTCTCTGGCTGCAACTTAATGCTCTGAT...TGGACATGCGTGACCAGCAGTACTCAGGTTTGAGGGTTTGCAGAAAGCCAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR GCA 90 bp ATGGTTCTCAGCATGGGGCTCCCAAACTTTCTTAGAGTGTCATTTGTTTTAGTAAAGATCTGGCCCTGCTaGCCTGGCGCCACCTTGTGC +
Preference number: 4 (lower is better)
Translates to: MVLSMGLPNFLRVSFVLVKIWPC*PGATLC
Trigger: GCACAAGGTGGCGCCAGGGCAGCAGGGCCAGATCTT...TACTAAAACAAATGACACTCTAAGAAAGTTTGGGAGCCCCATGCTGAGAACCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR GCA 90 bp ATCCTGGTGTGGCTACACCTTAAGATTCCTGTCTGCAACCCAGGTTCTCACCAACTCACGAAGAAAGTCTaGAAGAGGTCGAGGTGCATG +
Preference number: 4 (lower is better)
Translates to: ILVWLHLKIPVCNPGSHQLTKKV*KRSRCM
Trigger: CATGCACCTCGACCTCTTGCAGACTTTCTTCGTGAG...TTGGTGAGAACCTGGGTTGCAGACAGGAATCTTAAGGTGTAGCCACACCAGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR GCA 90 bp TGTGGTGATTTGCTCAGCTCCAAGCAGTATAGGGAGGTGGCGGTTTGCAGTGCCGGGGAACAGAGAAACTaGTTTTTGAAGATGATGTGG +
Preference number: 4 (lower is better)
Translates to: CGDLLSSKQYREVAVCSAGEQRN*FLKMMW
Trigger: CCACATCATCTTCAAAAAGCAGTTTCTCTGTTCCCC...GGCACTGCAAACCGCCACCTCCCTATACTGCTTGGAGCTGAGCAAATCACCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CCA 90 bp ACTGAAGCATGTCCATGTTTTAGCAGAAGCTCAACCAGGAAGTCGCTGCCCTTCTTGGGGCCATGCCGATaGTGGTCCCTTGGAAATAAA +
Preference number: 4 (lower is better)
Translates to: TEACPCFSRSSTRKSLPFLGPCR*WSLGNK
Trigger: TTTATTTCCAAGGGACCACCATCGGCATGGCCCCAA...GAAGGGCAGCGACTTCCTGGTTGAGCTTCTGCTAAAACATGGACATGCTTCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR CCA 90 bp ATCCTGGTGTGGCTACACCTTAAGATTCCTGTCTGCAACCCAGGTTCTCACCAATTGGGGCCATGCCGATaGTGGTCCCTTGGAAATAAA +
Preference number: 4 (lower is better)
Translates to: ILVWLHLKIPVCNPGSHQLGPCR*WSLGNK
Trigger: TTTATTTCCAAGGGACCACCATCGGCATGGCCCCAA...TTGGTGAGAACCTGGGTTGCAGACAGGAATCTTAAGGTGTAGCCACACCAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CCA 90 bp ATGGTTCTCAGCATGGGGCTCCCAAACTTTCTTAGAGTGTCATTTGTTTTAGTACGTGCAGGTACACGTTaGCTGGGCAGTGAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: MVLSMGLPNFLRVSFVLVRAGTR*LGSEGW
Trigger: CCAGCCCTCACTGCCCAGCCAACGTGTACCTGCACG...TACTAAAACAAATGACACTCTAAGAAAGTTTGGGAGCCCCATGCTGAGAACCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CCA 90 bp ATTGCCATTCAGTTTGCTTGGATGGAGATGGAATGGGTGGCAGGGTCTCTGATATTGCTTGGATGGAGATaGAATGGGTGGCAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: IAIQFAWMEMEWVAGSLILLGWR*NGWQGL
Trigger: GAGACCCTGCCACCCATTCCATCTCCATCCAAGCAA...TATCAGAGACCCTGCCACCCATTCCATCTCCATCCAAGCAAACTGAATGGCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR CCA 90 bp GCCCCGAGAACTGTGTTGTGTCTGTTGTCATGGAAACGATGGCAAAGCCACAGAGCCATTCAGTTTGCTTaGATGGAGATGGAATGGGTG +
Preference number: 4 (lower is better)
Translates to: APRTVLCLLSWKRWQSHRAIQFA*MEMEWV
Trigger: CACCCATTCCATCTCCATCCAAGCAAACTGAATGGC...TCTGTGGCTTTGCCATCGTTTCCATGACAACAGACACAACACAGTTCTCGGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR CCA 90 bp ATCCTGGTGTGGCTACACCTTAAGATTCCTGTCTGCAACCCAGGTTCTCACCAAGGCTCTGGCCTGAGATaGGGAATCCAGAAAATCAAC +
Preference number: 4 (lower is better)
Translates to: ILVWLHLKIPVCNPGSHQGSGLR*GIQKIN
Trigger: GTTGATTTTCTGGATTCCCCATCTCAGGCCAGAGCC...TTGGTGAGAACCTGGGTTGCAGACAGGAATCTTAAGGTGTAGCCACACCAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR TCA 90 bp TTGTTAAATGAAGGGTTGGTGACTCTGTGGGTTCCCTGGCTTTCTGCAAACCCTTCCCAACAGAGGCACTaGCAACTTCATCAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: LLNEGLVTLWVPWLSANPSQQRH*QLHQLF
Trigger: GAAGAGCTGATGAAGTTGTCAGTGCCTCTGTTGGGA...AGGGTTTGCAGAAAGCCAGGGAACCCACAGAGTCACCAACCCTTCATTTAACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR TCA 90 bp GAACTGTGTTGTGTCTGTTGTCATGGAAACGATGGCAAAGCCACAGAGTCAATGCTTCTTGCCCATGTCTaGGAGGGTGGTGGAAACACA +
Preference number: 4 (lower is better)
Translates to: ELCCVCCHGNDGKATESMLLAHV*EGGGNT
Trigger: TGTGTTTCCACCACCCTCTCAGACATGGGCAAGAAG...CATTGACTCTGTGGCTTTGCCATCGTTTCCATGACAACAGACACAACACAGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR TCA 90 bp TTTCCAGGTGATGGCCCTACAAAACTCAAACCACCTCTATTATTCATGCCTATACCGTGCACATGCTCATaGTTGGGGCCATGCCGATGG +
Preference number: 4 (lower is better)
Translates to: FPGDGPTKLKPPLLFMPIPCTCS*LGPCRW
Trigger: CCATCGGCATGGCCCCAATCATGAGCATGTGCACGG...TATAGGCATGAATAATAGAGGTGGTTTGAGTTTTGTAGGGCCATCACCTGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR TCA 90 bp GAACTGTGTTGTGTCTGTTGTCATGGAAACGATGGCAAAGCCACAGAGTCAATGCGGCTGGCACCTCCTTaGCACTGGATTTTTCCACAT +
Preference number: 4 (lower is better)
Translates to: ELCCVCCHGNDGKATESMRLAPP*HWIFPH
Trigger: ATGTGGAAAAATCCAGTGTCAAGGAGGTGCCAGCCG...CATTGACTCTGTGGCTTTGCCATCGTTTCCATGACAACAGACACAACACAGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR TCA 90 bp TGTGGTGATTTGCTCAGCTCCAAGCAGTATAGGGAGGTGGCGGTTTGCAGTGCCCATGAACTATACCCATaGACATCACATTCCATTGGT +
Preference number: 4 (lower is better)
Translates to: CGDLLSSKQYREVAVCSAHELYP*TSHSIG
Trigger: ACCAATGGAATGTGATGTTCATGGGTATAGTTCATG...GGCACTGCAAACCGCCACCTCCCTATACTGCTTGGAGCTGAGCAAATCACCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR TCA 90 bp TGTGGTGATTTGCTCAGCTCCAAGCAGTATAGGGAGGTGGCGGTTTGCAGTGCCTGTCGAACCCCAATATaGGAAATGTGTACAAAAGCA +
Preference number: 4 (lower is better)
Translates to: CGDLLSSKQYREVAVCSACRTPI*EMCTKA
Trigger: TGCTTTTGTACACATTTCTCATATTGGGGTTCGACA...GGCACTGCAAACCGCCACCTCCCTATACTGCTTGGAGCTGAGCAAATCACCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR GCA 90 bp GTCCACAGCAAAGAGCCAGAGTTCACCGCCCTTTCTCCTACCTTCTTCTCCAGTCATTGTCATGGGATTTaGGAGGTAGAAGCTTCATCT +
Preference number: 4 (lower is better)
Translates to: VHSKEPEFTALSPTFFSSHCHGI*EVEASS
Trigger: AGATGAAGCTTCTACCTCGCAAATCCCATGACAATG...ACTGGAGAAGAAGGTAGGAGAAAGGGCGGTGAACTCTGGCTCTTTGCTGTGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR GCA 90 bp TTGTTAAATGAAGGGTTGGTGACTCTGTGGGTTCCCTGGCTTTCTGCAAACCCTACCCCACTGACAAGCTaGGCATTGTCATGGGATTTG +
Preference number: 4 (lower is better)
Translates to: LLNEGLVTLWVPWLSANPTPLTS*ALSWDL
Trigger: CAAATCCCATGACAATGCGCAGCTTGTCAGTGGGGT...AGGGTTTGCAGAAAGCCAGGGAACCCACAGAGTCACCAACCCTTCATTTAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR GCA 90 bp TCCCTGGCTTTCTGCAAACCCTCAAACCTGAGTACTGCTGGTCACGCATGTCCAGCCATAAGGATCACCTaGAGAATTGACTCTCTCAAA +
Preference number: 4 (lower is better)
Translates to: SLAFCKPSNLSTAGHACPAIRIT*RIDSLK
Trigger: TTTGAGAGAGTCAATTCTGCAGGTGATCCTTATGGC...TGGACATGCGTGACCAGCAGTACTCAGGTTTGAGGGTTTGCAGAAAGCCAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR GCA 90 bp GAACTGTGTTGTGTCTGTTGTCATGGAAACGATGGCAAAGCCACAGAGTCAATGCATCTGCACACTTTGTaGCTGCAAGCACAAGCCCTG +
Preference number: 4 (lower is better)
Translates to: ELCCVCCHGNDGKATESMHLHTL*LQAQAL
Trigger: CAGGGCTTGTGCTTGCAGGCACAAAGTGTGCAGATG...CATTGACTCTGTGGCTTTGCCATCGTTTCCATGACAACAGACACAACACAGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR GCA 90 bp GAACTGTGTTGTGTCTGTTGTCATGGAAACGATGGCAAAGCCACAGAGTCAATGTTGCTTCTCCCCCACTaGTGTGGAGGCTCAGTGAAA +
Preference number: 4 (lower is better)
Translates to: ELCCVCCHGNDGKATESMLLLPH*CGGSVK
Trigger: TTTCACTGAGCCTCCACAGCAGTGGGGGAGAAGCAA...CATTGACTCTGTGGCTTTGCCATCGTTTCCATGACAACAGACACAACACAGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR GCA 90 bp GATTCTACTTGGGATCTCTTGAGCTGCATCTGGTACCATAAGCACAGCTGGGGGCTCATTGGCTCAGAGTaGTTAGTAAACATCAGTGGC +
Preference number: 4 (lower is better)
Translates to: DSTWDLLSCIWYHKHSWGLIGSE*LVNISG
Trigger: GCCACTGATGTTTACTAAGCACTCTGAGCCAATGAG...CCCCCAGCTGTGCTTATGGTACCAGATGCAGCTCAAGAGATCCCAAGTAGAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CCA 90 bp ACTGAAGCATGTCCATGTTTTAGCAGAAGCTCAACCAGGAAGTCGCTGCCCTTCCCATGTCTGAGAGGGTaGTGGAAACACATTCTTTGC +
Preference number: 4 (lower is better)
Translates to: TEACPCFSRSSTRKSLPFPCLRG*WKHILC
Trigger: GCAAAGAATGTGTTTCCACCACCCTCTCAGACATGG...GAAGGGCAGCGACTTCCTGGTTGAGCTTCTGCTAAAACATGGACATGCTTCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR CCA 90 bp ATTGCCATTCAGTTTGCTTGGATGGAGATGGAATGGGTGGCAGGGTCTCTGATAACTCTGTGGGTTCCCTaGCTTTCTGCAAACCCTCAA +
Preference number: 4 (lower is better)
Translates to: IAIQFAWMEMEWVAGSLITLWVP*LSANPQ
Trigger: TTGAGGGTTTGCAGAAAGCCAGGGAACCCACAGAGT...TATCAGAGACCCTGCCACCCATTCCATCTCCATCCAAGCAAACTGAATGGCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR CCA 90 bp TTTCCAGGTGATGGCCCTACAAAACTCAAACCACCTCTATTATTCATGCCTATACGGTGGGTAGGAATCTaGCGGCTTCCTCATCAGGCC +
Preference number: 4 (lower is better)
Translates to: FPGDGPTKLKPPLLFMPIRWVGI*RLPHQA
Trigger: GGCCTGATGAGGAAGCCGCCAGATTCCTACCCACCG...TATAGGCATGAATAATAGAGGTGGTTTGAGTTTTGTAGGGCCATCACCTGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CCA 90 bp GATTCTACTTGGGATCTCTTGAGCTGCATCTGGTACCATAAGCACAGCTGGGGGTTCCAGTCTCTATCCTaGTGTGGCTACACCTTAAGA +
Preference number: 4 (lower is better)
Translates to: DSTWDLLSCIWYHKHSWGFQSLS*CGYTLR
Trigger: TCTTAAGGTGTAGCCACACCAGGATAGAGACTGGAA...CCCCCAGCTGTGCTTATGGTACCAGATGCAGCTCAAGAGATCCCAAGTAGAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CCA 90 bp GATTCTACTTGGGATCTCTTGAGCTGCATCTGGTACCATAAGCACAGCTGGGGGAGACCTTGTGAAACATaGCTCCCTAGTCAGGCATTT +
Preference number: 4 (lower is better)
Translates to: DSTWDLLSCIWYHKHSWGRPCET*LPSQAF
Trigger: AAATGCCTGACTAGGGAGCCATGTTTCACAAGGTCT...CCCCCAGCTGTGCTTATGGTACCAGATGCAGCTCAAGAGATCCCAAGTAGAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CCA 90 bp AATGTCCCCCAGCAGCCTGTCATTGTGTGTGAAACTCCTAGCCTGAGAGCCCCAAAGACAGAGGCATCATaGCATTTTACCTTATCTGAG +
Preference number: 4 (lower is better)
Translates to: NVPQQPVIVCETPSLRAPKTEAS*HFTLSE
Trigger: CTCAGATAAGGTAAAATGCCATGATGCCTCTGTCTT...TGGGGCTCTCAGGCTAGGAGTTTCACACACAATGACAGGCTGCTGGGGGACATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CCA 90 bp ATCCTGGTGTGGCTACACCTTAAGATTCCTGTCTGCAACCCAGGTTCTCACCAATGCTGGGGGTCTCATTaGCTCAGAGTGCTTAGTAAA +
Preference number: 4 (lower is better)
Translates to: ILVWLHLKIPVCNPGSHQCWGSH*LRVLSK
Trigger: TTTACTAAGCACTCTGAGCCAATGAGACCCCCAGCA...TTGGTGAGAACCTGGGTTGCAGACAGGAATCTTAAGGTGTAGCCACACCAGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CCA 90 bp GATTCTACTTGGGATCTCTTGAGCTGCATCTGGTACCATAAGCACAGCTGGGGGAAAGGGGCTTGTGTCTaGGTGATAGGGAAAGGTAAA +
Preference number: 4 (lower is better)
Translates to: DSTWDLLSCIWYHKHSWGKGACV*VIGKGK
Trigger: TTTACCTTTCCCTATCACCCAGACACAAGCCCCTTT...CCCCCAGCTGTGCTTATGGTACCAGATGCAGCTCAAGAGATCCCAAGTAGAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CCA 90 bp ATGGTTCTCAGCATGGGGCTCCCAAACTTTCTTAGAGTGTCATTTGTTTTAGTACTGCTGGACTTAGGCTaGTGGGGTTGCTCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: MVLSMGLPNFLRVSFVLVLLDLG*WGCSGL
Trigger: CAGCCCAGAGCAACCCCACCAGCCTAAGTCCAGCAG...TACTAAAACAAATGACACTCTAAGAAAGTTTGGGAGCCCCATGCTGAGAACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR CAA 72 bp AAAGACCTTGTGAAACATGGCTCCCTAGTCAGGCATTaGAAGAGTGAAGAGTTCAAGGGGATGCTGCCCAAG +
Preference number: 4 (lower is better)
Translates to: KDLVKHGSLVRH*KSEEFKGMLPK
Trigger: CTTGGGCAGCATCCCCTTGAACTCTTCACTCTTCAAATGCCTGACTAGGGAGCCATGTTTCACAAGGTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR TCA 90 bp TTTCATTGCCATTCAGTTTGCTTGGATGGAGATGGAATGGGTGGCAGGGTCTCTACCAAGGGGATTGTCTaGATGGTCCATGACAATTCC +
Preference number: 4 (lower is better)
Translates to: FHCHSVCLDGDGMGGRVSTKGIV*MVHDNS
Trigger: GGAATTGTCATGGACCATTCAGACAATCCCCTTGGT...AGAGACCCTGCCACCCATTCCATCTCCATCCAAGCAAACTGAATGGCAATGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR TCA 90 bp TTGTTAAATGAAGGGTTGGTGACTCTGTGGGTTCCCTGGCTTTCTGCAAACCCTGATCACCTGCAGAATTaGCTCTCTCAAAGCAGATCC +
Preference number: 4 (lower is better)
Translates to: LLNEGLVTLWVPWLSANPDHLQN*LSQSRS
Trigger: GGATCTGCTTTGAGAGAGTCAATTCTGCAGGTGATC...AGGGTTTGCAGAAAGCCAGGGAACCCACAGAGTCACCAACCCTTCATTTAACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR TCA 90 bp TGTGGTGATTTGCTCAGCTCCAAGCAGTATAGGGAGGTGGCGGTTTGCAGTGCCAAAGCCTCATCTGTCTaGATACAGGATCATTGTATT +
Preference number: 4 (lower is better)
Translates to: CGDLLSSKQYREVAVCSAKASSV*IQDHCI
Trigger: AATACAATGATCCTGTATTCAGACAGATGAGGCTTT...GGCACTGCAAACCGCCACCTCCCTATACTGCTTGGAGCTGAGCAAATCACCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR GCA 90 bp TGTTTCATTGCCATTCAGTTTGCTTGGATGGAGATGGAATGGGTGGCAGGGTCTTCTTTTATGCCTTCTTaGCCATGTCTGAGAGGGTGG +
Preference number: 4 (lower is better)
Translates to: CFIAIQFAWMEMEWVAGSSFMPS*PCLRGW
Trigger: CCACCCTCTCAGACATGGGCAAGAAGGCATAAAAGA...AGACCCTGCCACCCATTCCATCTCCATCCAAGCAAACTGAATGGCAATGAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR GCA 90 bp ATGGTTCTCAGCATGGGGCTCCCAAACTTTCTTAGAGTGTCATTTGTTTTAGTATCTGGCCAGAGGATCTaGAGGCAGAGGCTTCTGAGG +
Preference number: 4 (lower is better)
Translates to: MVLSMGLPNFLRVSFVLVSGQRI*RQRLLR
Trigger: CCTCAGAAGCCTCTGCCTGCAGATCCTCTGGCCAGA...TACTAAAACAAATGACACTCTAAGAAAGTTTGGGAGCCCCATGCTGAGAACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR GCA 90 bp ATCCTGGTGTGGCTACACCTTAAGATTCCTGTCTGCAACCCAGGTTCTCACCAACCTACTACAGCGCACTaGACTGTAATCAACATTCTG +
Preference number: 4 (lower is better)
Translates to: ILVWLHLKIPVCNPGSHQPTTAH*TVINIL
Trigger: CAGAATGTTGATTACAGTGCAGTGCGCTGTAGTAGG...TTGGTGAGAACCTGGGTTGCAGACAGGAATCTTAAGGTGTAGCCACACCAGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR GCA 90 bp ATCCTGGTGTGGCTACACCTTAAGATTCCTGTCTGCAACCCAGGTTCTCACCAACACAACAAGCCTTCCTaGCATGGAAAACTCAGTGAT +
Preference number: 4 (lower is better)
Translates to: ILVWLHLKIPVCNPGSHQHNKPS*HGKLSD
Trigger: ATCACTGAGTTTTCCATGGCAGGAAGGCTTGTTGTG...TTGGTGAGAACCTGGGTTGCAGACAGGAATCTTAAGGTGTAGCCACACCAGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR GCA 90 bp ATCCTGGTGTGGCTACACCTTAAGATTCCTGTCTGCAACCCAGGTTCTCACCAACTTAAGATTCCTGTCTaGAACCCAGGTTCTCACCAA +
Preference number: 4 (lower is better)
Translates to: ILVWLHLKIPVCNPGSHQLKIPV*NPGSHQ
Trigger: TTGGTGAGAACCTGGGTTGCAGACAGGAATCTTAAG...TTGGTGAGAACCTGGGTTGCAGACAGGAATCTTAAGGTGTAGCCACACCAGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CCA 90 bp TTTCCAGGTGATGGCCCTACAAAACTCAAACCACCTCTATTATTCATGCCTATACCTGCAGGCTTCAGCTaGCAGTCTTCACAGCACAGC +
Preference number: 4 (lower is better)
Translates to: FPGDGPTKLKPPLLFMPIPAGFS*QSSQHS
Trigger: GCTGTGCTGTGAAGACTGCCAGCTGAAGCCTGCAGG...TATAGGCATGAATAATAGAGGTGGTTTGAGTTTTGTAGGGCCATCACCTGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CCA 90 bp CTATTTTATGCAGTAATGGCCACGGGGGATGGAGTTAGGCTCTTACATTGTTTTCCCTGTGCAGAACTCTaGGAGGTCACAGGAGTTGCT +
Preference number: 4 (lower is better)
Translates to: LFYAVMATGDGVRLLHCFPCAEL*EVTGVA
Trigger: AGCAACTCCTGTGACCTCCCAGAGTTCTGCACAGGG...AAAACAATGTAAGAGCCTAACTCCATCCCCCGTGGCCATTACTGCATAAAATAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR CCA 90 bp ATGGTTCTCAGCATGGGGCTCCCAAACTTTCTTAGAGTGTCATTTGTTTTAGTAGGCAGGTTTAGCACCTaGTCCCCAGAGCGTGACACA +
Preference number: 4 (lower is better)
Translates to: MVLSMGLPNFLRVSFVLVGRFST*SPERDT
Trigger: TGTGTCACGCTCTGGGGACCAGGTGCTAAACCTGCC...TACTAAAACAAATGACACTCTAAGAAAGTTTGGGAGCCCCATGCTGAGAACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CCA 90 bp CAGCAAAGAGCCAGAGTTCACCGCCCTTTCTCCTACCTTCTTCTCCAGTTTGTTCTCTCATCTCGCATTTaGCAAAGGAACTCTTCGAGA +
Preference number: 4 (lower is better)
Translates to: QQRARVHRPFSYLLLQFVLSSRI*QRNSSR
Trigger: TCTCGAAGAGTTCCTTTGCCAAATGCGAGATGAGAG...AACAAACTGGAGAAGAAGGTAGGAGAAAGGGCGGTGAACTCTGGCTCTTTGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR CCA 90 bp TCCCTGGCTTTCTGCAAACCCTCAAACCTGAGTACTGCTGGTCACGCATGTCCAGGATGTTTGTTTCTATaGAAACGGCATTGGTACCAA +
Preference number: 4 (lower is better)
Translates to: SLAFCKPSNLSTAGHACPGCLFL*KRHWYQ
Trigger: TTGGTACCAATGCCGTTTCCATAGAAACAAACATCC...TGGACATGCGTGACCAGCAGTACTCAGGTTTGAGGGTTTGCAGAAAGCCAGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR CCA 90 bp CCTGCTACTCTCTCAGGAGCAGCACTGAAGCATGTCCATGTTTTAGCAGAAGCTTTGTGTCTGTTGTCATaGAAACGATGGCAAAGCCAC +
Preference number: 4 (lower is better)
Translates to: PATLSGAALKHVHVLAEALCLLS*KRWQSH
Trigger: GTGGCTTTGCCATCGTTTCCATGACAACAGACACAA...AGCTTCTGCTAAAACATGGACATGCTTCAGTGCTGCTCCTGAGAGAGTAGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR CCA 90 bp TTTCCAGGTGATGGCCCTACAAAACTCAAACCACCTCTATTATTCATGCCTATATATCTGCTTGCCGGATaGGGCCGCTGTCTGTGCTTC +
Preference number: 4 (lower is better)
Translates to: FPGDGPTKLKPPLLFMPIYLLAG*GRCLCF
Trigger: GAAGCACAGACAGCGGCCCCATCCGGCAAGCAGATA...TATAGGCATGAATAATAGAGGTGGTTTGAGTTTTGTAGGGCCATCACCTGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CCA 90 bp ATCCTGGTGTGGCTACACCTTAAGATTCCTGTCTGCAACCCAGGTTCTCACCAACCTATGGTTAAACCTTaGTTATCTGCTTGCCGGATG +
Preference number: 4 (lower is better)
Translates to: ILVWLHLKIPVCNPGSHQPMVKP*LSACRM
Trigger: CATCCGGCAAGCAGATAACCAAGGTTTAACCATAGG...TTGGTGAGAACCTGGGTTGCAGACAGGAATCTTAAGGTGTAGCCACACCAGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CCA 90 bp TTTCCAGGTGATGGCCCTACAAAACTCAAACCACCTCTATTATTCATGCCTATAAGCAGTATAGGGAGGTaGCGGTTTGCAGTGCCTGGG +
Preference number: 4 (lower is better)
Translates to: FPGDGPTKLKPPLLFMPISSIGR*RFAVPG
Trigger: CCCAGGCACTGCAAACCGCCACCTCCCTATACTGCT...TATAGGCATGAATAATAGAGGTGGTTTGAGTTTTGTAGGGCCATCACCTGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CCA 90 bp TGTGGTGATTTGCTCAGCTCCAAGCAGTATAGGGAGGTGGCGGTTTGCAGTGCCTGGCCATTGATGACATaGCATAAGATCACAGTTTTA +
Preference number: 4 (lower is better)
Translates to: CGDLLSSKQYREVAVCSAWPLMT*HKITVL
Trigger: TAAAACTGTGATCTTATGCCATGTCATCAATGGCCA...GGCACTGCAAACCGCCACCTCCCTATACTGCTTGGAGCTGAGCAAATCACCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CCA 90 bp GATTCTACTTGGGATCTCTTGAGCTGCATCTGGTACCATAAGCACAGCTGGGGGTTTTTGAAGATGATGTaGAAGGTCAGGGTGGGTTAC +
Preference number: 4 (lower is better)
Translates to: DSTWDLLSCIWYHKHSWGFLKMM*KVRVGY
Trigger: GTAACCCACCCTGACCTTCCACATCATCTTCAAAAA...CCCCCAGCTGTGCTTATGGTACCAGATGCAGCTCAAGAGATCCCAAGTAGAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR TCA 90 bp ATGGTTCTCAGCATGGGGCTCCCAAACTTTCTTAGAGTGTCATTTGTTTTAGTAAAGCACCGCCTTGAGTaGCACTACAGACCCCTTCCA +
Preference number: 4 (lower is better)
Translates to: MVLSMGLPNFLRVSFVLVKHRLE*HYRPLP
Trigger: TGGAAGGGGTCTGTAGTGTCACTCAAGGCGGTGCTT...TACTAAAACAAATGACACTCTAAGAAAGTTTGGGAGCCCCATGCTGAGAACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR TCA 90 bp GATTCTACTTGGGATCTCTTGAGCTGCATCTGGTACCATAAGCACAGCTGGGGGTTTTTGAGGATGCATTaGTGTATTGATTTGCCTGGG +
Preference number: 4 (lower is better)
Translates to: DSTWDLLSCIWYHKHSWGFLRMH*CIDLPG
Trigger: CCCAGGCAAATCAATACATCAATGCATCCTCAAAAA...CCCCCAGCTGTGCTTATGGTACCAGATGCAGCTCAAGAGATCCCAAGTAGAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR GCA 90 bp CTCTCAGGAGCAGCACTGAAGCATGTCCATGTTTTAGCAGAAGCTCAACCAGGATGGAAACACATTCTTTaGAGCGAGGTTTGGTGTGTT +
Preference number: 4 (lower is better)
Translates to: LSGAALKHVHVLAEAQPGWKHIL*SEVWCV
Trigger: AACACACCAAACCTCGCTGCAAAGAATGTGTTTCCA...TCCTGGTTGAGCTTCTGCTAAAACATGGACATGCTTCAGTGCTGCTCCTGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR GCA 90 bp ATCCTGGTGTGGCTACACCTTAAGATTCCTGTCTGCAACCCAGGTTCTCACCAAAACTCTTCGAGACTTTaGCACAGTTGCCATAAGGAT +
Preference number: 4 (lower is better)
Translates to: ILVWLHLKIPVCNPGSHQNSSRL*HSCHKD
Trigger: ATCCTTATGGCAACTGTGGCAAAGTCTCGAAGAGTT...TTGGTGAGAACCTGGGTTGCAGACAGGAATCTTAAGGTGTAGCCACACCAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR GCA 90 bp TTTCCAGGTGATGGCCCTACAAAACTCAAACCACCTCTATTATTCATGCCTATAGCCGTGGCACTGCATTaGACACTCGTGAACCCCAAA +
Preference number: 4 (lower is better)
Translates to: FPGDGPTKLKPPLLFMPIAVALH*TLVNPK
Trigger: TTTGGGGTTCACGAGTGTGCAATGCAGTGCCACGGC...TATAGGCATGAATAATAGAGGTGGTTTGAGTTTTGTAGGGCCATCACCTGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR GCA 90 bp TTTCCAGGTGATGGCCCTACAAAACTCAAACCACCTCTATTATTCATGCCTATATGGGGCCGCTGTCTGTaGTTCCTCCAAAGCCAAACT +
Preference number: 4 (lower is better)
Translates to: FPGDGPTKLKPPLLFMPIWGRCL*FLQSQT
Trigger: AGTTTGGCTTTGGAGGAAGCACAGACAGCGGCCCCA...TATAGGCATGAATAATAGAGGTGGTTTGAGTTTTGTAGGGCCATCACCTGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR GCA 90 bp CAGCAAAGAGCCAGAGTTCACCGCCCTTTCTCCTACCTTCTTCTCCAGTTTGTTCATTGCCATTCAGTTTaGTTGGATGGAGATGGAATG +
Preference number: 4 (lower is better)
Translates to: QQRARVHRPFSYLLLQFVHCHSV*LDGDGM
Trigger: CATTCCATCTCCATCCAAGCAAACTGAATGGCAATG...AACAAACTGGAGAAGAAGGTAGGAGAAAGGGCGGTGAACTCTGGCTCTTTGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR GCA 90 bp TTGTTAAATGAAGGGTTGGTGACTCTGTGGGTTCCCTGGCTTTCTGCAAACCCTATGCACTCTATTTTATaGAGTAATGGCCACGGGGGA +
Preference number: 4 (lower is better)
Translates to: LLNEGLVTLWVPWLSANPMHSIL*SNGHGG
Trigger: TCCCCCGTGGCCATTACTGCATAAAATAGAGTGCAT...AGGGTTTGCAGAAAGCCAGGGAACCCACAGAGTCACCAACCCTTCATTTAACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR GCA 90 bp ATGGTTCTCAGCATGGGGCTCCCAAACTTTCTTAGAGTGTCATTTGTTTTAGTAGGGATAGCCACACACTaGAGCAGTCACCACTTTGGC +
Preference number: 4 (lower is better)
Translates to: MVLSMGLPNFLRVSFVLVGIATH*SSHHFG
Trigger: GCCAAAGTGGTGACTGCTGCAGTGTGTGGCTATCCC...TACTAAAACAAATGACACTCTAAGAAAGTTTGGGAGCCCCATGCTGAGAACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CCA 90 bp CTCTCAGGAGCAGCACTGAAGCATGTCCATGTTTTAGCAGAAGCTCAACCAGGATTGTCATGGAAACGATaGCAAAGCCACAGAGTCAAT +
Preference number: 4 (lower is better)
Translates to: LSGAALKHVHVLAEAQPGLSWKR*QSHRVN
Trigger: ATTGACTCTGTGGCTTTGCCATCGTTTCCATGACAA...TCCTGGTTGAGCTTCTGCTAAAACATGGACATGCTTCAGTGCTGCTCCTGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR CCA 90 bp TTTCCAGGTGATGGCCCTACAAAACTCAAACCACCTCTATTATTCATGCCTATAGGGATTGTCCTTCGGTaGGTAGGAATCTGGCGGCTT +
Preference number: 4 (lower is better)
Translates to: FPGDGPTKLKPPLLFMPIGIVLR*VGIWRL
Trigger: AAGCCGCCAGATTCCTACCCACCGAAGGACAATCCC...TATAGGCATGAATAATAGAGGTGGTTTGAGTTTTGTAGGGCCATCACCTGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CCA 90 bp ATCCTGGTGTGGCTACACCTTAAGATTCCTGTCTGCAACCCAGGTTCTCACCAAAAGAAAAGTAGCCTCTaGGCTACTTTGTGTCTAGTC +
Preference number: 4 (lower is better)
Translates to: ILVWLHLKIPVCNPGSHQKKSSL*ATLCLV
Trigger: GACTAGACACAAAGTAGCCCAGAGGCTACTTTTCTT...TTGGTGAGAACCTGGGTTGCAGACAGGAATCTTAAGGTGTAGCCACACCAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR CAA 72 bp TACCTTCTTCTCCAGTTTGTTTCATTGCCATTCAGTTaGCTTGGATGGAGATGGAATGGGTGGCAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: YLLLQFVSLPFS*LGWRWNGWQGL
Trigger: GAGACCCTGCCACCCATTCCATCTCCATCCAAGCAAACTGAATGGCAATGAAACAAACTGGAGAAGAAGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR TCA 90 bp CTATTTTATGCAGTAATGGCCACGGGGGATGGAGTTAGGCTCTTACATTGTTTTTCTTTTCCTTGCCTCTaGAACTCTCGGTTGTCTGCC +
Preference number: 4 (lower is better)
Translates to: LFYAVMATGDGVRLLHCFSFPCL*NSRLSA
Trigger: GGCAGACAACCGAGAGTTTCAGAGGCAAGGAAAAGA...AAAACAATGTAAGAGCCTAACTCCATCCCCCGTGGCCATTACTGCATAAAATAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR TCA 90 bp ATGGTTCTCAGCATGGGGCTCCCAAACTTTCTTAGAGTGTCATTTGTTTTAGTATCCTGCTGCAACTGCTaGACACCATGGGAAATGGGT +
Preference number: 4 (lower is better)
Translates to: MVLSMGLPNFLRVSFVLVSCCNC*TPWEMG
Trigger: ACCCATTTCCCATGGTGTTCAGCAGTTGCAGCAGGA...TACTAAAACAAATGACACTCTAAGAAAGTTTGGGAGCCCCATGCTGAGAACCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR TCA 90 bp TTTCCAGGTGATGGCCCTACAAAACTCAAACCACCTCTATTATTCATGCCTATATATCAAGCACCGCCTTaGGTGACACTACAGACCCCT +
Preference number: 4 (lower is better)
Translates to: FPGDGPTKLKPPLLFMPIYQAPP*VTLQTP
Trigger: AGGGGTCTGTAGTGTCACTCAAGGCGGTGCTTGATA...TATAGGCATGAATAATAGAGGTGGTTTGAGTTTTGTAGGGCCATCACCTGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CCA 90 bp GAACTGTGTTGTGTCTGTTGTCATGGAAACGATGGCAAAGCCACAGAGTCAATGCTTCTGGATGATTCTTaGAGTCGAAGCTCTTCACTG +
Preference number: 4 (lower is better)
Translates to: ELCCVCCHGNDGKATESMLLDDS*SRSSSL
Trigger: CAGTGAAGAGCTTCGACTCCAAGAATCATCCAGAAG...CATTGACTCTGTGGCTTTGCCATCGTTTCCATGACAACAGACACAACACAGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR CCA 90 bp TTTCCAGGTGATGGCCCTACAAAACTCAAACCACCTCTATTATTCATGCCTATATTCATCCCGAAATTGTaGCCCAGCTCATGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: FPGDGPTKLKPPLLFMPIFIPKL*PSSCAR
Trigger: CCTGGCACATGAGCTGGGCCACAATTTCGGGATGAA...TATAGGCATGAATAATAGAGGTGGTTTGAGTTTTGTAGGGCCATCACCTGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CCA 90 bp TTTCCAGGTGATGGCCCTACAAAACTCAAACCACCTCTATTATTCATGCCTATACGGTGTGGGTGGATCTaGGCACTTGGTGTGGATATT +
Preference number: 4 (lower is better)
Translates to: FPGDGPTKLKPPLLFMPIRCGWI*ALGVDI
Trigger: AATATCCACACCAAGTGCCCAGATCCACCCACACCG...TATAGGCATGAATAATAGAGGTGGTTTGAGTTTTGTAGGGCCATCACCTGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CCA 90 bp TTTCCAGGTGATGGCCCTACAAAACTCAAACCACCTCTATTATTCATGCCTATACTCACTGCACAGAAATaGTTCTCAGCATGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: FPGDGPTKLKPPLLFMPILTAQK*FSAWGS
Trigger: GGAGCCCCATGCTGAGAACCATTTCTGTGCAGTGAG...TATAGGCATGAATAATAGAGGTGGTTTGAGTTTTGTAGGGCCATCACCTGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CCA 90 bp TTTCCAGGTGATGGCCCTACAAAACTCAAACCACCTCTATTATTCATGCCTATATGTGGAAGGTCAGGGTaGGTTACAGGGCATTCAACC +
Preference number: 4 (lower is better)
Translates to: FPGDGPTKLKPPLLFMPICGRSG*VTGHST
Trigger: GGTTGAATGCCCTGTAACCCACCCTGACCTTCCACA...TATAGGCATGAATAATAGAGGTGGTTTGAGTTTTGTAGGGCCATCACCTGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR CAA 72 bp AAGAATGTGTCATCAGCCATGGCCCCTAAGTGGCCATaGATGACATGGCATAAGATCACAGTTTTAACCTCC +
Preference number: 4 (lower is better)
Translates to: KNVSSAMAPKWP*MTWHKITVLTS
Trigger: GGAGGTTAAAACTGTGATCTTATGCCATGTCATCAATGGCCACTTAGGGGCCATGGCTGATGACACATTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR CAA 72 bp ATAAGCTGTAGGAAGAAAAGTAGCCTCTGGGCTACTTaGTGTCTAGTCACATTGACTTTCCAGGTGATGGCC +
Preference number: 4 (lower is better)
Translates to: ISCRKKSSLWAT*CLVTLTFQVMA
Trigger: GGCCATCACCTGGAAAGTCAATGTGACTAGACACAAAGTAGCCCAGAGGCTACTTTTCTTCCTACAGCTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR TCA 90 bp CTATTTTATGCAGTAATGGCCACGGGGGATGGAGTTAGGCTCTTACATTGTTTTGACCGTTGCAATAAATaGGCAAACTGTCCGAGTTGG +
Preference number: 4 (lower is better)
Translates to: LFYAVMATGDGVRLLHCFDRCNK*ANCPSW
Trigger: CCAACTCGGACAGTTTGCTCATTTATTGCAACGGTC...AAAACAATGTAAGAGCCTAACTCCATCCCCCGTGGCCATTACTGCATAAAATAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR TCA 90 bp TTTCATTGCCATTCAGTTTGCTTGGATGGAGATGGAATGGGTGGCAGGGTCTCTTTCTTACTTGTTAAATaGAGGGTTGGTGACTCTGTG +
Preference number: 4 (lower is better)
Translates to: FHCHSVCLDGDGMGGRVSFLLVK*RVGDSV
Trigger: CACAGAGTCACCAACCCTTCATTTAACAAGTAAGAA...AGAGACCCTGCCACCCATTCCATCTCCATCCAAGCAAACTGAATGGCAATGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR GCA 90 bp GAACTGTGTTGTGTCTGTTGTCATGGAAACGATGGCAAAGCCACAGAGTCAATGAACTCTTCGAGACTTTaGCACAGTTGCCATAAGGAT +
Preference number: 4 (lower is better)
Translates to: ELCCVCCHGNDGKATESMNSSRL*HSCHKD
Trigger: ATCCTTATGGCAACTGTGGCAAAGTCTCGAAGAGTT...CATTGACTCTGTGGCTTTGCCATCGTTTCCATGACAACAGACACAACACAGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR GCA 90 bp ATGGTTCTCAGCATGGGGCTCCCAAACTTTCTTAGAGTGTCATTTGTTTTAGTAAGTTCAAGGGGATGCTaGCCAAGCCAGCATCTCATA +
Preference number: 4 (lower is better)
Translates to: MVLSMGLPNFLRVSFVLVSSRGC*PSQHLI
Trigger: TATGAGATGCTGGCTTGGGCAGCATCCCCTTGAACT...TACTAAAACAAATGACACTCTAAGAAAGTTTGGGAGCCCCATGCTGAGAACCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CCA 90 bp GATTCTACTTGGGATCTCTTGAGCTGCATCTGGTACCATAAGCACAGCTGGGGGAGAGTTTGTATCTGTTaGTTGCACTTTTCATTGGTT +
Preference number: 4 (lower is better)
Translates to: DSTWDLLSCIWYHKHSWGRVCIC*LHFSLV
Trigger: AACCAATGAAAAGTGCAACCAACAGATACAAACTCT...CCCCCAGCTGTGCTTATGGTACCAGATGCAGCTCAAGAGATCCCAAGTAGAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CCA 90 bp TTTCCAGGTGATGGCCCTACAAAACTCAAACCACCTCTATTATTCATGCCTATACTCACCAAAGCTTCCTaGCCAGAAGCCAGATTTCTC +
Preference number: 4 (lower is better)
Translates to: FPGDGPTKLKPPLLFMPILTKAS*PEARFL
Trigger: GAGAAATCTGGCTTCTGGCCAGGAAGCTTTGGTGAG...TATAGGCATGAATAATAGAGGTGGTTTGAGTTTTGTAGGGCCATCACCTGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR CAA 72 bp AAAAGTAGCCTCTGGGCTACTTTGTGTCTAGTCACATaGACTTTCCAGGTGATGGCCCTACAAAACTCAAAC +
Preference number: 4 (lower is better)
Translates to: KSSLWATLCLVT*TFQVMALQNSN
Trigger: GTTTGAGTTTTGTAGGGCCATCACCTGGAAAGTCAATGTGACTAGACACAAAGTAGCCCAGAGGCTACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR TCA 90 bp TTTCCAGGTGATGGCCCTACAAAACTCAAACCACCTCTATTATTCATGCCTATACAGGCATTTGAAGAGTaGAGAGTTCAAGGGGATGCT +
Preference number: 4 (lower is better)
Translates to: FPGDGPTKLKPPLLFMPIQAFEE*RVQGDA
Trigger: AGCATCCCCTTGAACTCTTCACTCTTCAAATGCCTG...TATAGGCATGAATAATAGAGGTGGTTTGAGTTTTGTAGGGCCATCACCTGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR GCA 90 bp TTTCCAGGTGATGGCCCTACAAAACTCAAACCACCTCTATTATTCATGCCTATATGGGATCTCTTGAGCTaGATCTGGTACCATAAGCAC +
Preference number: 4 (lower is better)
Translates to: FPGDGPTKLKPPLLFMPIWDLLS*IWYHKH
Trigger: GTGCTTATGGTACCAGATGCAGCTCAAGAGATCCCA...TATAGGCATGAATAATAGAGGTGGTTTGAGTTTTGTAGGGCCATCACCTGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CCA 90 bp TTTCATTGCCATTCAGTTTGCTTGGATGGAGATGGAATGGGTGGCAGGGTCTCTAATATTCAGCACTTCTaGATGATTCTTGGAGTCGAA +
Preference number: 4 (lower is better)
Translates to: FHCHSVCLDGDGMGGRVSNIQHF*MILGVE
Trigger: TTCGACTCCAAGAATCATCCAGAAGTGCTGAATATT...AGAGACCCTGCCACCCATTCCATCTCCATCCAAGCAAACTGAATGGCAATGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR CCA 90 bp CTCTCAGGAGCAGCACTGAAGCATGTCCATGTTTTAGCAGAAGCTCAACCAGGAAGAGTTTGTATCTGTTaGTTGCACTTTTCATTGGTT +
Preference number: 4 (lower is better)
Translates to: LSGAALKHVHVLAEAQPGRVCIC*LHFSLV
Trigger: AACCAATGAAAAGTGCAACCAACAGATACAAACTCT...TCCTGGTTGAGCTTCTGCTAAAACATGGACATGCTTCAGTGCTGCTCCTGAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR CCA 90 bp TTTCCAGGTGATGGCCCTACAAAACTCAAACCACCTCTATTATTCATGCCTATATTTGCCTGGGAACAATaGCCTATAGTTCAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: FPGDGPTKLKPPLLFMPIFAWEQ*PIVQPE
Trigger: CTCAGGCTGAACTATAGGCCATTGTTCCCAGGCAAA...TATAGGCATGAATAATAGAGGTGGTTTGAGTTTTGTAGGGCCATCACCTGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CCA 90 bp TTTCCAGGTGATGGCCCTACAAAACTCAAACCACCTCTATTATTCATGCCTATAATTGTGACTTTCAGCTaGGTAACTGGTGTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: FPGDGPTKLKPPLLFMPIIVTFS*VTGVWL
Trigger: CAGCCAGACACCAGTTACCCAGCTGAAAGTCACAAT...TATAGGCATGAATAATAGAGGTGGTTTGAGTTTTGTAGGGCCATCACCTGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CCA 90 bp ATGGTTCTCAGCATGGGGCTCCCAAACTTTCTTAGAGTGTCATTTGTTTTAGTAAGATGTATTAGCCACTaGCTTTGTGTGGGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: MVLSMGLPNFLRVSFVLVRCISH*LCVGSC
Trigger: ACAGCTGCCCACACAAAGCCAGTGGCTAATACATCT...TACTAAAACAAATGACACTCTAAGAAAGTTTGGGAGCCCCATGCTGAGAACCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR TCA 90 bp TTTCCAGGTGATGGCCCTACAAAACTCAAACCACCTCTATTATTCATGCCTATACCTTATCACATTCTGTaGTGCTCAACAGGTAGGTTG +
Preference number: 4 (lower is better)
Translates to: FPGDGPTKLKPPLLFMPIPYHIL*CSTGRL
Trigger: CAACCTACCTGTTGAGCATCACAGAATGTGATAAGG...TATAGGCATGAATAATAGAGGTGGTTTGAGTTTTGTAGGGCCATCACCTGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR TCA 90 bp TTTCCAGGTGATGGCCCTACAAAACTCAAACCACCTCTATTATTCATGCCTATAGAAAAATCCACGCTGTaGAATGTAACCTCCTGTGTG +
Preference number: 4 (lower is better)
Translates to: FPGDGPTKLKPPLLFMPIEKSTL*NVTSCV
Trigger: CACACAGGAGGTTACATTTCACAGCGTGGATTTTTC...TATAGGCATGAATAATAGAGGTGGTTTGAGTTTTGTAGGGCCATCACCTGGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR GCA 90 bp TTTCCAGGTGATGGCCCTACAAAACTCAAACCACCTCTATTATTCATGCCTATATGCCACCACTTTTCCTaGCTTGGATTTGTAGAGGAT +
Preference number: 4 (lower is better)
Translates to: FPGDGPTKLKPPLLFMPICHHFS*LGFVED
Trigger: ATCCTCTACAAATCCAAGGCAGGAAAAGTGGTGGCA...TATAGGCATGAATAATAGAGGTGGTTTGAGTTTTGTAGGGCCATCACCTGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CCA 90 bp TTTCCAGGTGATGGCCCTACAAAACTCAAACCACCTCTATTATTCATGCCTATAGTCTCTATCCTGGTGTaGCTACACCTTAAGATTCCT +
Preference number: 4 (lower is better)
Translates to: FPGDGPTKLKPPLLFMPIVSILV*LHLKIP
Trigger: AGGAATCTTAAGGTGTAGCCACACCAGGATAGAGAC...TATAGGCATGAATAATAGAGGTGGTTTGAGTTTTGTAGGGCCATCACCTGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR TCA 90 bp ATGGTTCTCAGCATGGGGCTCCCAAACTTTCTTAGAGTGTCATTTGTTTTAGTAGGAACACCGGGAAAGTaGAATGCAGTTTTGTTTTCT +
Preference number: 4 (lower is better)
Translates to: MVLSMGLPNFLRVSFVLVGTPGK*NAVLFS
Trigger: AGAAAACAAAACTGCATTTCACTTTCCCGGTGTTCC...TACTAAAACAAATGACACTCTAAGAAAGTTTGGGAGCCCCATGCTGAGAACCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR GCA 90 bp ATGGTTCTCAGCATGGGGCTCCCAAACTTTCTTAGAGTGTCATTTGTTTTAGTATGGAAACACATTCTTTaGAGCGAGGTTTGGTGTGTT +
Preference number: 4 (lower is better)
Translates to: MVLSMGLPNFLRVSFVLVWKHIL*SEVWCV
Trigger: AACACACCAAACCTCGCTGCAAAGAATGTGTTTCCA...TACTAAAACAAATGACACTCTAAGAAAGTTTGGGAGCCCCATGCTGAGAACCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR GCA 90 bp ATGGTTCTCAGCATGGGGCTCCCAAACTTTCTTAGAGTGTCATTTGTTTTAGTACATTGTCATGGGATTTaGGAGGTAGAAGCTTCATCT +
Preference number: 4 (lower is better)
Translates to: MVLSMGLPNFLRVSFVLVHCHGI*EVEASS
Trigger: AGATGAAGCTTCTACCTCGCAAATCCCATGACAATG...TACTAAAACAAATGACACTCTAAGAAAGTTTGGGAGCCCCATGCTGAGAACCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR GCA 90 bp ATGGTTCTCAGCATGGGGCTCCCAAACTTTCTTAGAGTGTCATTTGTTTTAGTAGCCATAAGGATCACCTaGAGAATTGACTCTCTCAAA +
Preference number: 4 (lower is better)
Translates to: MVLSMGLPNFLRVSFVLVAIRIT*RIDSLK
Trigger: TTTGAGAGAGTCAATTCTGCAGGTGATCCTTATGGC...TACTAAAACAAATGACACTCTAAGAAAGTTTGGGAGCCCCATGCTGAGAACCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR GCA 90 bp ATGGTTCTCAGCATGGGGCTCCCAAACTTTCTTAGAGTGTCATTTGTTTTAGTAGGCTGTACTAGAAGCTaGCATTACTGTTCCAAAAAG +
Preference number: 4 (lower is better)
Translates to: MVLSMGLPNFLRVSFVLVGCTRS*HYCSKK
Trigger: CTTTTTGGAACAGTAATGGCAGCTTCTAGTACAGCC...TACTAAAACAAATGACACTCTAAGAAAGTTTGGGAGCCCCATGCTGAGAACCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CCA 90 bp CTATTTTATGCAGTAATGGCCACGGGGGATGGAGTTAGGCTCTTACATTGTTTTGATCCGAATGTTCAGTaGTCTGTAAAACTTGTCAAC +
Preference number: 4 (lower is better)
Translates to: LFYAVMATGDGVRLLHCFDPNVQ*SVKLVN
Trigger: GTTGACAAGTTTTACAGACCACTGAACATTCGGATC...AAAACAATGTAAGAGCCTAACTCCATCCCCCGTGGCCATTACTGCATAAAATAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR CCA 90 bp ATGGTTCTCAGCATGGGGCTCCCAAACTTTCTTAGAGTGTCATTTGTTTTAGTAGCATGCTATACGAGTTaGAATGTATTAGAGCTGGGT +
Preference number: 4 (lower is better)
Translates to: MVLSMGLPNFLRVSFVLVACYTS*NVLELG
Trigger: ACCCAGCTCTAATACATTCCAACTCGTATAGCATGC...TACTAAAACAAATGACACTCTAAGAAAGTTTGGGAGCCCCATGCTGAGAACCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CCA 90 bp TTTCCAGGTGATGGCCCTACAAAACTCAAACCACCTCTATTATTCATGCCTATAAAATGGTTCTCAGCATaGGGCTCCCAAACTTTCTTA +
Preference number: 4 (lower is better)
Translates to: FPGDGPTKLKPPLLFMPIKWFSA*GSQTFL
Trigger: TAAGAAAGTTTGGGAGCCCCATGCTGAGAACCATTT...TATAGGCATGAATAATAGAGGTGGTTTGAGTTTTGTAGGGCCATCACCTGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CCA 90 bp TTTCCAGGTGATGGCCCTACAAAACTCAAACCACCTCTATTATTCATGCCTATAGGATGTTTGTTTCTATaGAAACGGCATTGGTACCAA +
Preference number: 4 (lower is better)
Translates to: FPGDGPTKLKPPLLFMPIGCLFL*KRHWYQ
Trigger: TTGGTACCAATGCCGTTTCCATAGAAACAAACATCC...TATAGGCATGAATAATAGAGGTGGTTTGAGTTTTGTAGGGCCATCACCTGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CCA 90 bp ATGGTTCTCAGCATGGGGCTCCCAAACTTTCTTAGAGTGTCATTTGTTTTAGTAAGAAAAAGAAGTGCTTaGCATTTCTATCAAGCACCG +
Preference number: 4 (lower is better)
Translates to: MVLSMGLPNFLRVSFVLVRKRSA*HFYQAP
Trigger: CGGTGCTTGATAGAAATGCCAAGCACTTCTTTTTCT...TACTAAAACAAATGACACTCTAAGAAAGTTTGGGAGCCCCATGCTGAGAACCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR TCA 90 bp ATGGTTCTCAGCATGGGGCTCCCAAACTTTCTTAGAGTGTCATTTGTTTTAGTAGTAAACAGACTTGATTaGCTAGATCTGGTTAATGGT +
Preference number: 4 (lower is better)
Translates to: MVLSMGLPNFLRVSFVLVVNRLD*LDLVNG
Trigger: ACCATTAACCAGATCTAGTCAATCAAGTCTGTTTAC...TACTAAAACAAATGACACTCTAAGAAAGTTTGGGAGCCCCATGCTGAGAACCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR TCA 90 bp ATGGTTCTCAGCATGGGGCTCCCAAACTTTCTTAGAGTGTCATTTGTTTTAGTATCCTTAAGAACATTTTaGCACAGTTTTAGCCGGTTT +
Preference number: 4 (lower is better)
Translates to: MVLSMGLPNFLRVSFVLVSLRTF*HSFSRF
Trigger: AAACCGGCTAAAACTGTGTCAAAATGTTCTTAAGGA...TACTAAAACAAATGACACTCTAAGAAAGTTTGGGAGCCCCATGCTGAGAACCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR GCA 90 bp TTTCCAGGTGATGGCCCTACAAAACTCAAACCACCTCTATTATTCATGCCTATAAGTTACAGGAACAACTaGTACACATTCAAAGAACAG +
Preference number: 4 (lower is better)
Translates to: FPGDGPTKLKPPLLFMPISYRNN*YTFKEQ
Trigger: CTGTTCTTTGAATGTGTAGCAGTTGTTCCTGTAACT...TATAGGCATGAATAATAGAGGTGGTTTGAGTTTTGTAGGGCCATCACCTGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CCA 90 bp TTTCCAGGTGATGGCCCTACAAAACTCAAACCACCTCTATTATTCATGCCTATACCAGATCTAAGGATTTaGGCATCTAAAAAGACAATG +
Preference number: 4 (lower is better)
Translates to: FPGDGPTKLKPPLLFMPIPDLRI*ASKKTM
Trigger: CATTGTCTTTTTAGATGCCCAAATCCTTAGATCTGG...TATAGGCATGAATAATAGAGGTGGTTTGAGTTTTGTAGGGCCATCACCTGGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CCA 90 bp ATGGTTCTCAGCATGGGGCTCCCAAACTTTCTTAGAGTGTCATTTGTTTTAGTATGTGTATTTCCACAATaGAGAATGTTAGGCTTCGTT +
Preference number: 4 (lower is better)
Translates to: MVLSMGLPNFLRVSFVLVCVFPQ*RMLGFV
Trigger: AACGAAGCCTAACATTCTCCATTGTGGAAATACACA...TACTAAAACAAATGACACTCTAAGAAAGTTTGGGAGCCCCATGCTGAGAACCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368679.8
3UTR CAA 72 bp AATAACTATAGAATAAACAGATGCATGCTATACGAGTaGGAATGTATTAGAGCTGGGTTCCCTTTTGTGTGT +
Preference number: 4 (lower is better)
Translates to: NNYRINRCMLYE*ECIRAGFPFVC
Trigger: ACACACAAAAGGGAACCCAGCTCTAATACATTCCAACTCGTATAGCATGCATCTGTTTATTCTATAGTTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS GCA 90 bp GGGAGGGCTCAGATGAGTGTCAGTGAGGCAGTAGACGCATGCTCCTaGGATCCCACGGGCTCCTGGCCCTGGCCGCGCTCCCTGTTGGAC +
Preference number: 5 (lower is better)
Translates to: GRAQMSVSEAVDACS*DPTGSWPWPRSLLD
Trigger: GTCCAACAGGGAGCGCGGCCAGGGCCAGGAGCCCGTGGGATCGCAGGAGCATGCGTCTACTGCCTCACTGACACTCATCTGAGCCCTCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS CCA 90 bp GTTTGGCTTACAGGTCCCCTGGGCCTGCCTAAGTGCAGGCTTGGCTaGCAGGGGTCTGGCAGGGACGCTAGGTGCACGTGGAGCCCGGTG +
Preference number: 5 (lower is better)
Translates to: VWLTGPLGLPKCRLG*QGSGRDARCTWSPV
Trigger: CACCGGGCTCCACGTGCACCTAGCGTCCCTGCCAGACCCCTGCCAGCCAAGCCTGCACTTAGGCAGGCCCAGGGGACCTGTAAGCCAAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368679.8
ENST00000448723.2
CDS GCA 90 bp TGTCATGGGAGGGCTCAGATGAGTGTCAGTGAGGCAGTAGACGCATaGTCCTGCGATCCCACGGGCTCCTGGCCCTGGCCGCGCTCCCTG +
Preference number: 5 (lower is better)
Translates to: CHGRAQMSVSEAVDA*SCDPTGSWPWPRSL
Trigger: CAGGGAGCGCGGCCAGGGCCAGGAGCCCGTGGGATCGCAGGAGCATGCGTCTACTGCCTCACTGACACTCATCTGAGCCCTCCCATGACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS TCA 90 bp AGGCGGAGCCCAGTCTCCCATTGTCCTGGGGTCCTGGCCAAGGCATaGGTGAGCCGAGTTGTTCTGGCCAGAGGATCTGCAGGCAGAGGC +
Preference number: 5 (lower is better)
Translates to: RRSPVSHCPGVLAKA*VSRVVLARGSAGRG
Trigger: GCCTCTGCCTGCAGATCCTCTGGCCAGAACAACTCGGCTCACTCATGCCTTGGCCAGGACCCCAGGACAATGGGAGACTGGGCTCCGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368679.8
ENST00000448723.2
CDS CCA 90 bp CTGCCAGTGCCTCTCCTGATGCCGAGCTTGTGGCGGCCACGTACCTaGTCCCCAGAGCGTGACACACTGCTGCTCGTGAGTCTGGCAGAT +
Preference number: 5 (lower is better)
Translates to: LPVPLLMPSLWRPRT*SPERDTLLLVSLAD
Trigger: ATCTGCCAGACTCACGAGCAGCAGTGTGTCACGCTCTGGGGACCAGGTACGTGGCCGCCACAAGCTCGGCATCAGGAGAGGCACTGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482291.1
CDS TCA 90 bp CTGGTCACGGTCTCCATGTCATGGGAGGGCTCAGATGAGTGTCAGTaGGGCAGTAGACGCATGCTCCTGCGATCCCACGGGCTCCTGGCC +
Preference number: 5 (lower is better)
Translates to: LVTVSMSWEGSDECQ*GSRRMLLRSHGLLA
Trigger: GGCCAGGAGCCCGTGGGATCGCAGGAGCATGCGTCTACTGCCTCACTGACACTCATCTGAGCCCTCCCATGACATGGAGACCGTGACCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS GCA 90 bp AGTGAGGGCTGGCCCCTGTGCAGAACTCTGGGAGGTCACAGGAGTTaGTGGAGTCCCTGCACGCTGTTCCTGCAGGCTTCAGCTGGCAGT +
Preference number: 5 (lower is better)
Translates to: SEGWPLCRTLGGHRS*WSPCTLFLQASAGS
Trigger: ACTGCCAGCTGAAGCCTGCAGGAACAGCGTGCAGGGACTCCAGCAACTCCTGTGACCTCCCAGAGTTCTGCACAGGGGCCAGCCCTCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368676.8
ENST00000368679.8
ENST00000448723.2
ENST00000467145.1
ENST00000482291.1
CDS CCA 90 bp GAGGGCTGGCCCCTGTGCAGAACTCTGGGAGGTCACAGGAGTTGCTaGAGTCCCTGCACGCTGTTCCTGCAGGCTTCAGCTGGCAGTCTT +
Preference number: 5 (lower is better)
Translates to: EGWPLCRTLGGHRSC*SPCTLFLQASAGSL
Trigger: AAGACTGCCAGCTGAAGCCTGCAGGAACAGCGTGCAGGGACTCCAGCAACTCCTGTGACCTCCCAGAGTTCTGCACAGGGGCCAGCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368676.8
ENST00000368679.8
ENST00000448723.2
ENST00000467145.1
ENST00000482291.1
CDS CCA 90 bp AGCCGTCCACATCCTGACATGAGTGCCCATCGTGCAGGTACACGTTaGCTGGGCAGTGAGGGCTGGCCCCTGTGCAGAACTCTGGGAGGT +
Preference number: 5 (lower is better)
Translates to: SRPHPDMSAHRAGTR*LGSEGWPLCRTLGG
Trigger: ACCTCCCAGAGTTCTGCACAGGGGCCAGCCCTCACTGCCCAGCCAACGTGTACCTGCACGATGGGCACTCATGTCAGGATGTGGACGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368676.8
ENST00000368679.8
ENST00000448723.2
ENST00000467145.1
ENST00000482291.1
CDS TCA 90 bp GGAGCCCAGTCTCCCATTGTCCTGGGGTCCTGGCCAAGGCATGAGTaGGCCGAGTTGTTCTGGCCAGAGGATCTGCAGGCAGAGGCTTCT +
Preference number: 5 (lower is better)
Translates to: GAQSPIVLGSWPRHE*AELFWPEDLQAEAS
Trigger: AGAAGCCTCTGCCTGCAGATCCTCTGGCCAGAACAACTCGGCTCACTCATGCCTTGGCCAGGACCCCAGGACAATGGGAGACTGGGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368679.8
ENST00000448723.2
CDS TCA 90 bp CCTGATGCCGAGCTTGTGGCGGCCACGTACCTGGTCCCCAGAGCGTaGCACACTGCTGCTCGTGAGTCTGGCAGATGCCATTGTAGCAGT +
Preference number: 5 (lower is better)
Translates to: PDAELVAATYLVPRA*HTAARESGRCHCSS
Trigger: ACTGCTACAATGGCATCTGCCAGACTCACGAGCAGCAGTGTGTCACGCTCTGGGGACCAGGTACGTGGCCGCCACAAGCTCGGCATCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482291.1
CDS-3UTR CAA 90 bp CTGAAAGCCAAACACAGCCTGGACCTGAAGCCCCTTGGCTCTGGCCTGAGATGGGGAGAAGGTTGGGCTTaGGGCATCCCTTGGGTGGGC +
Preference number: 5 (lower is better)
Translates to: LKAKHSLDLKPLGSGLRWGEGWA*GIPWVG
Trigger: GCCCACCCAAGGGATGCCCAAAGCCCAACCTTCTCC...CCATCTCAGGCCAGAGCCAAGGGGCTTCAGGTCCAGGCTGTGTTTGGCTTTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS GCA 90 bp TGTTCCTGCAGGCTTCAGCTGGCAGTCTTCACAGCACAGCCCATGTaGGCACACAGCGTCCGGCTTCAGGGTACAGGTGGTGGCATTGCA +
Preference number: 5 (lower is better)
Translates to: CSCRLQLAVFTAQPM*AHSVRLQGTGGGIA
Trigger: TGCAATGCCACCACCTGTACCCTGAAGCCGGACGCTGTGTGCGCACATGGGCTGTGCTGTGAAGACTGCCAGCTGAAGCCTGCAGGAACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368676.8
ENST00000368679.8
ENST00000448723.2
ENST00000467145.1
ENST00000482291.1
CDS GCA 90 bp GGCCATGCTCTTGTAAGCAGTGGAGAGAGGGCCTCCGTGTTCTCTTaGCTAGGTGGAGGTGTAGCTGAGCTGGGAGCCCCCATCACTCAC +
Preference number: 5 (lower is better)
Translates to: GHALVSSGERASVFS*LGGGVAELGAPITH
Trigger: GTGAGTGATGGGGGCTCCCAGCTCAGCTACACCTCCACCTAGGCAAGAGAACACGGAGGCCCTCTCTCCACTGCTTACAAGAGCATGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494661.1
CDS CCA 90 bp TCCCCACTCCCAACAGAGGCACTGACAACTTCATCAGCTCTTCCTTaGTTCCATAAGCTCACCCCTCGGGCCTCGCAGGGCGCGAGCAGA +
Preference number: 5 (lower is better)
Translates to: SPLPTEALTTSSALP*FHKLTPRASQGASR
Trigger: TCTGCTCGCGCCCTGCGAGGCCCGAGGGGTGAGCTTATGGAACCAAGGAAGAGCTGATGAAGTTGTCAGTGCCTCTGTTGGGAGTGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368676.8
ENST00000368679.8
ENST00000448723.2
CDS-3UTR CAA 90 bp TGTGGTGATTTGCTCAGCTCCAAGCAGTATAGGGAGGTGGCGGTTTGCAGTGCCTGCCCTGGCGCCACCTaGTGCCCTTTCTGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: CGDLLSSKQYREVAVCSACPGAT*CPFCCW
Trigger: CCAGCAGCAGAAAGGGCACAAGGTGGCGCCAGGGCA...GGCACTGCAAACCGCCACCTCCCTATACTGCTTGGAGCTGAGCAAATCACCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS CCA 90 bp GCAGATTTTTCCATCTGCACACTTTGTGCCTGCAAGCACAAGCCCTaGGTCCGGCATGTCATCGCCCAAGTACACGTGGGTCCCCCGGCA +
Preference number: 5 (lower is better)
Translates to: ADFSICTLCACKHKP*VRHVIAQVHVGPPA
Trigger: TGCCGGGGGACCCACGTGTACTTGGGCGATGACATGCCGGACCCAGGGCTTGTGCTTGCAGGCACAAAGTGTGCAGATGGAAAAATCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000368676.8
ENST00000368679.8
ENST00000448723.2
CDS-3UTR CAA 90 bp CTGAAAGCCAAACACAGCCTGGACCTGAAGCCCCTTGGCTCTGGCCTGAGATGGCAGTTCTTCCTGTTGTaGCACACCCCTCTGCCGTGG +
Preference number: 5 (lower is better)
Translates to: LKAKHSLDLKPLGSGLRWQFFLL*HTPLPW
Trigger: CCACGGCAGAGGGGTGTGCAACAACAGGAAGAACTG...CCATCTCAGGCCAGAGCCAAGGGGCTTCAGGTCCAGGCTGTGTTTGGCTTTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CAA 90 bp ATGGAAACGATGGCAAAGCCACAGAGTCAATGCTGCCAGTCACAGGAGGCCTTGCTGCCTTGCTTCTGCTaGCCGGATGGGGCCGCTGTC +
Preference number: 5 (lower is better)
Translates to: METMAKPQSQCCQSQEALLPCFC*PDGAAV
Trigger: GACAGCGGCCCCATCCGGCAAGCAGAAGCAAGGCAG...CAAGGCCTCCTGTGACTGGCAGCATTGACTCTGTGGCTTTGCCATCGTTTCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR CAA 90 bp GATTCTACTTGGGATCTCTTGAGCTGCATCTGGTACCATAAGCACAGCTGGGGGGTGAGCCTGACAGGGTaGGAAGCCACGGGGTGGCCG +
Preference number: 5 (lower is better)
Translates to: DSTWDLLSCIWYHKHSWGVSLTG*EATGWP
Trigger: CGGCCACCCCGTGGCTTCCAACCCTGTCAGGCTCAC...CCCCCAGCTGTGCTTATGGTACCAGATGCAGCTCAAGAGATCCCAAGTAGAATC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS GCA 90 bp TCGCCCAAGTACACGTGGGTCCCCCGGCACAGAATCCGGCCTCCTTaGTGCAGGGGGATGTTTGTTTCTATGGAAACGGCATTGGTACCA +
Preference number: 5 (lower is better)
Translates to: SPKYTWVPRHRIRPP*CRGMFVSMETALVP
Trigger: TGGTACCAATGCCGTTTCCATAGAAACAAACATCCCCCTGCAGCAAGGAGGCCGGATTCTGTGCCGGGGGACCCACGTGTACTTGGGCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000368676.8
ENST00000368679.8
ENST00000448723.2
CDS-3UTR CAA 90 bp CTGGCGCCACCTTGTGCCCTTTCTGCTGCTGGGGGTCTCATTGGCTCAGAGTGCGACATCAGTACCGTCTaGCAGATAGTGGGTTTCCGT +
Preference number: 5 (lower is better)
Translates to: LAPPCALSAAGGLIGSECDISTV*QIVGFR
Trigger: ACGGAAACCCACTATCTGCAAGACGGTACTGATGTC...GCACTCTGAGCCAATGAGACCCCCAGCAGCAGAAAGGGCACAAGGTGGCGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CAA 90 bp GCCCCGAGAACTGTGTTGTGTCTGTTGTCATGGAAACGATGGCAAAGCCACAGATGGCCGCGCTCCCTGTaGGACTCTGCAGCTTCCTGC +
Preference number: 5 (lower is better)
Translates to: APRTVLCLLSWKRWQSHRWPRSL*DSAASC
Trigger: GCAGGAAGCTGCAGAGTCCAACAGGGAGCGCGGCCA...TCTGTGGCTTTGCCATCGTTTCCATGACAACAGACACAACACAGTTCTCGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS GCA 90 bp CCCAAGTACACGTGGGTCCCCCGGCACAGAATCCGGCCTCCTTGCTaGAGGGGGATGTTTGTTTCTATGGAAACGGCATTGGTACCAATG +
Preference number: 5 (lower is better)
Translates to: PKYTWVPRHRIRPPC*RGMFVSMETALVPM
Trigger: CATTGGTACCAATGCCGTTTCCATAGAAACAAACATCCCCCTGCAGCAAGGAGGCCGGATTCTGTGCCGGGGGACCCACGTGTACTTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000368676.8
ENST00000368679.8
ENST00000448723.2
CDS-3UTR CAA 90 bp CTGGCGCCACCTTGTGCCCTTTCTGCTGCTGGGGGTCTCATTGGCTCAGAGTGCTCTTTGCAGCGAGGTTaGGTGTGTTGTGATGTGATC +
Preference number: 5 (lower is better)
Translates to: LAPPCALSAAGGLIGSECSLQRG*VCCDVI
Trigger: GATCACATCACAACACACCAAACCTCGCTGCAAAGA...GCACTCTGAGCCAATGAGACCCCCAGCAGCAGAAAGGGCACAAGGTGGCGCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CAA 90 bp CTGGCGCCACCTTGTGCCCTTTCTGCTGCTGGGGGTCTCATTGGCTCAGAGTGCGTGGAAACACATTCTTaGCAGCGAGGTTTGGTGTGT +
Preference number: 5 (lower is better)
Translates to: LAPPCALSAAGGLIGSECVETHS*QRGLVC
Trigger: ACACACCAAACCTCGCTGCAAAGAATGTGTTTCCAC...GCACTCTGAGCCAATGAGACCCCCAGCAGCAGAAAGGGCACAAGGTGGCGCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CAA 90 bp GTCCACAGCAAAGAGCCAGAGTTCACCGCCCTTTCTCCTACCTTCTTCTCCAGTCTGCAGCTTCCTGCCTaGCTTCTGCTTGCCGGATGG +
Preference number: 5 (lower is better)
Translates to: VHSKEPEFTALSPTFFSSLQLPA*LLLAGW
Trigger: CCATCCGGCAAGCAGAAGCAAGGCAGGAAGCTGCAG...ACTGGAGAAGAAGGTAGGAGAAAGGGCGGTGAACTCTGGCTCTTTGCTGTGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR CAA 90 bp TGTGTCTGTTGTCATGGAAACGATGGCAAAGCCACAGAGTCAATGCTGCCAGTCCAGTCACAGGAGGCCTaGGGGACGCGTGACCTCCTC +
Preference number: 5 (lower is better)
Translates to: CVCCHGNDGKATESMLPVQSQEA*GTRDLL
Trigger: GAGGAGGTCACGCGTCCCCAAGGCCTCCTGTGACTG...GACTGGCAGCATTGACTCTGTGGCTTTGCCATCGTTTCCATGACAACAGACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR CAA 90 bp AATGTCCCCCAGCAGCCTGTCATTGTGTGTGAAACTCCTAGCCTGAGAGCCCCACTGGCTGAGGCCATCTaGAGCGCAGTGAGGAAGGAT +
Preference number: 5 (lower is better)
Translates to: NVPQQPVIVCETPSLRAPLAEAI*SAVRKD
Trigger: ATCCTTCCTCACTGCGCTCAAGATGGCCTCAGCCAG...TGGGGCTCTCAGGCTAGGAGTTTCACACACAATGACAGGCTGCTGGGGGACATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS GCA 90 bp GGTGGAGGTGTAGCTGAGCTGGGAGCCCCCATCACTCACTCTCAGTaGTTTAGCACGAGCAGGAAAAGACAGAGGTTGCCTGCAGTAGAT +
Preference number: 5 (lower is better)
Translates to: GGGVAELGAPITHSQ*FSTSRKRQRLPAVD
Trigger: ATCTACTGCAGGCAACCTCTGTCTTTTCCTGCTCGTGCTAAAGCACTGAGAGTGAGTGATGGGGGCTCCCAGCTCAGCTACACCTCCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494661.1
CDS-3UTR CAA 90 bp CTGAAAGCCAAACACAGCCTGGACCTGAAGCCCCTTGGCTCTGGCCTGAGATGGCTCTTTTATGCCTTCTaGCCCATGTCTGAGAGGGTG +
Preference number: 5 (lower is better)
Translates to: LKAKHSLDLKPLGSGLRWLFYAF*PMSERV
Trigger: CACCCTCTCAGACATGGGCAAGAAGGCATAAAAGAG...CCATCTCAGGCCAGAGCCAAGGGGCTTCAGGTCCAGGCTGTGTTTGGCTTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CAA 90 bp GCTGGACTTCCCCTCCTGAGCCCCGAGAACTGTGTTGTGTCTGTTGTCATGGAAGCCGATGGTGGTCCCTaGGAAATAAACCCCACTGAC +
Preference number: 5 (lower is better)
Translates to: AGLPLLSPENCVVSVVMEADGGP*EINPTD
Trigger: GTCAGTGGGGTTTATTTCCAAGGGACCACCATCGGC...TTCCATGACAACAGACACAACACAGTTCTCGGGGCTCAGGAGGGGAAGTCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR CAA 90 bp ATCCTGGTGTGGCTACACCTTAAGATTCCTGTCTGCAACCCAGGTTCTCACCAAGGGAGGTCACAGGAGTaGCTGGAGTCCCTGCACGCT +
Preference number: 5 (lower is better)
Translates to: ILVWLHLKIPVCNPGSHQGRSQE*LESLHA
Trigger: AGCGTGCAGGGACTCCAGCAACTCCTGTGACCTCCC...TTGGTGAGAACCTGGGTTGCAGACAGGAATCTTAAGGTGTAGCCACACCAGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CAA 90 bp ATCCTGGTGTGGCTACACCTTAAGATTCCTGTCTGCAACCCAGGTTCTCACCAAGAGCCCAGTCTCCCATaGTCCTGGGGTCCTGGCCAA +
Preference number: 5 (lower is better)
Translates to: ILVWLHLKIPVCNPGSHQEPSLP*SWGPGQ
Trigger: TTGGCCAGGACCCCAGGACAATGGGAGACTGGGCTC...TTGGTGAGAACCTGGGTTGCAGACAGGAATCTTAAGGTGTAGCCACACCAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CAA 90 bp TGTGGTGATTTGCTCAGCTCCAAGCAGTATAGGGAGGTGGCGGTTTGCAGTGCCCACTTGGTGTGGATATaGTGGAGCAGGTCTGAGGGG +
Preference number: 5 (lower is better)
Translates to: CGDLLSSKQYREVAVCSAHLVWI*WSRSEG
Trigger: CCCCTCAGACCTGCTCCACAATATCCACACCAAGTG...GGCACTGCAAACCGCCACCTCCCTATACTGCTTGGAGCTGAGCAAATCACCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CAA 90 bp CTGAAAGCCAAACACAGCCTGGACCTGAAGCCCCTTGGCTCTGGCCTGAGATGGATTCCTGCAGCCAAGTaGGAAAAAGAGGATGCCCCA +
Preference number: 5 (lower is better)
Translates to: LKAKHSLDLKPLGSGLRWIPAAK*EKEDAP
Trigger: TGGGGCATCCTCTTTTTCCAACTTGGCTGCAGGAAT...CCATCTCAGGCCAGAGCCAAGGGGCTTCAGGTCCAGGCTGTGTTTGGCTTTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CAA 90 bp CTGAAAGCCAAACACAGCCTGGACCTGAAGCCCCTTGGCTCTGGCCTGAGATGGGCCCCTAAGTGGCCATaGATGACATGGCATAAGATC +
Preference number: 5 (lower is better)
Translates to: LKAKHSLDLKPLGSGLRWAPKWP*MTWHKI
Trigger: GATCTTATGCCATGTCATCAATGGCCACTTAGGGGC...CCATCTCAGGCCAGAGCCAAGGGGCTTCAGGTCCAGGCTGTGTTTGGCTTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CAA 90 bp CTGAAAGCCAAACACAGCCTGGACCTGAAGCCCCTTGGCTCTGGCCTGAGATGGAACCTTTCAGCGGAATaGCCTGGAACCCATGAAGTG +
Preference number: 5 (lower is better)
Translates to: LKAKHSLDLKPLGSGLRWNLSAE*PGTHEV
Trigger: CACTTCATGGGTTCCAGGCAATTCCGCTGAAAGGTT...CCATCTCAGGCCAGAGCCAAGGGGCTTCAGGTCCAGGCTGTGTTTGGCTTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CAA 90 bp AATGTCCCCCAGCAGCCTGTCATTGTGTGTGAAACTCCTAGCCTGAGAGCCCCACCCAGCAGCCTGTCATaGTGTGTGAAACTCCTAGCC +
Preference number: 5 (lower is better)
Translates to: NVPQQPVIVCETPSLRAPPSSLS*CVKLLA
Trigger: GGCTAGGAGTTTCACACACAATGACAGGCTGCTGGG...TGGGGCTCTCAGGCTAGGAGTTTCACACACAATGACAGGCTGCTGGGGGACATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CAA 90 bp TGTGGTGATTTGCTCAGCTCCAAGCAGTATAGGGAGGTGGCGGTTTGCAGTGCCACCTGGGAAAGGGGCTaGTGTCTGGGTGATAGGGAA +
Preference number: 5 (lower is better)
Translates to: CGDLLSSKQYREVAVCSATWERG*CLGDRE
Trigger: TTCCCTATCACCCAGACACAAGCCCCTTTCCCAGGT...GGCACTGCAAACCGCCACCTCCCTATACTGCTTGGAGCTGAGCAAATCACCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CAA 90 bp GATTCTACTTGGGATCTCTTGAGCTGCATCTGGTACCATAAGCACAGCTGGGGGGGCTTTGGGCATCCCTaGGGTGGGCCTTGTAGGGAT +
Preference number: 5 (lower is better)
Translates to: DSTWDLLSCIWYHKHSWGGFGHP*GGPCRD
Trigger: ATCCCTACAAGGCCCACCCAAGGGATGCCCAAAGCC...CCCCCAGCTGTGCTTATGGTACCAGATGCAGCTCAAGAGATCCCAAGTAGAATC
56% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CAA 90 bp CTGAAAGCCAAACACAGCCTGGACCTGAAGCCCCTTGGCTCTGGCCTGAGATGGGCATTGTCATGGGATTaGCGAGGTAGAAGCTTCATC +
Preference number: 5 (lower is better)
Translates to: LKAKHSLDLKPLGSGLRWALSWD*RGRSFI
Trigger: GATGAAGCTTCTACCTCGCAAATCCCATGACAATGC...CCATCTCAGGCCAGAGCCAAGGGGCTTCAGGTCCAGGCTGTGTTTGGCTTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CAA 90 bp GCTGGACTTCCCCTCCTGAGCCCCGAGAACTGTGTTGTGTCTGTTGTCATGGAATTTCTCAACCGCCATTaGACAGCTACAGCCCCTGTC +
Preference number: 5 (lower is better)
Translates to: AGLPLLSPENCVVSVVMEFLNRH*TATAPV
Trigger: GACAGGGGCTGTAGCTGTCAAATGGCGGTTGAGAAA...TTCCATGACAACAGACACAACACAGTTCTCGGGGCTCAGGAGGGGAAGTCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR CAA 90 bp TTGTTAAATGAAGGGTTGGTGACTCTGTGGGTTCCCTGGCTTTCTGCAAACCCTGGGAGGTCACAGGAGTaGCTGGAGTCCCTGCACGCT +
Preference number: 5 (lower is better)
Translates to: LLNEGLVTLWVPWLSANPGRSQE*LESLHA
Trigger: AGCGTGCAGGGACTCCAGCAACTCCTGTGACCTCCC...AGGGTTTGCAGAAAGCCAGGGAACCCACAGAGTCACCAACCCTTCATTTAACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR CAA 90 bp AATGTCCCCCAGCAGCCTGTCATTGTGTGTGAAACTCCTAGCCTGAGAGCCCCATCTATGGAAACGGCATaGGTACCAATGACTGGCCGG +
Preference number: 5 (lower is better)
Translates to: NVPQQPVIVCETPSLRAPSMETA*VPMTGR
Trigger: CCGGCCAGTCATTGGTACCAATGCCGTTTCCATAGA...TGGGGCTCTCAGGCTAGGAGTTTCACACACAATGACAGGCTGCTGGGGGACATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CAA 90 bp CTGAGCCCCGAGAACTGTGTTGTGTCTGTTGTCATGGAAACGATGGCAAAGCCACAGTTCTTCCTGTTGTaGCACACCCCTCTGCCGTGG +
Preference number: 5 (lower is better)
Translates to: LSPENCVVSVVMETMAKPQFFLL*HTPLPW
Trigger: CCACGGCAGAGGGGTGTGCAACAACAGGAAGAACTG...TGGCTTTGCCATCGTTTCCATGACAACAGACACAACACAGTTCTCGGGGCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR CAA 90 bp CTGGCGCCACCTTGTGCCCTTTCTGCTGCTGGGGGTCTCATTGGCTCAGAGTGCGGATGCATTGATGTATaGATTTGCCTGGGAACAATG +
Preference number: 5 (lower is better)
Translates to: LAPPCALSAAGGLIGSECGCIDV*ICLGTM
Trigger: CATTGTTCCCAGGCAAATCAATACATCAATGCATCC...GCACTCTGAGCCAATGAGACCCCCAGCAGCAGAAAGGGCACAAGGTGGCGCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CAA 90 bp ATCCTGGTGTGGCTACACCTTAAGATTCCTGTCTGCAACCCAGGTTCTCACCAAGCATCGGCCTGTGGTTaGACCTGGGAAAGGGGCTTG +
Preference number: 5 (lower is better)
Translates to: ILVWLHLKIPVCNPGSHQASACG*TWERGL
Trigger: CAAGCCCCTTTCCCAGGTCAAACCACAGGCCGATGC...TTGGTGAGAACCTGGGTTGCAGACAGGAATCTTAAGGTGTAGCCACACCAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CAA 90 bp AATGTCCCCCAGCAGCCTGTCATTGTGTGTGAAACTCCTAGCCTGAGAGCCCCATGGCACAAGCCAGCCTaGACCGTTGCAATAAATGAG +
Preference number: 5 (lower is better)
Translates to: NVPQQPVIVCETPSLRAPWHKPA*TVAINE
Trigger: CTCATTTATTGCAACGGTCAAGGCTGGCTTGTGCCA...TGGGGCTCTCAGGCTAGGAGTTTCACACACAATGACAGGCTGCTGGGGGACATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CAA 90 bp CTGAAAGCCAAACACAGCCTGGACCTGAAGCCCCTTGGCTCTGGCCTGAGATGGTTCGCTGGGAAGAGTTaGTATCTGTTGGTTGCACTT +
Preference number: 5 (lower is better)
Translates to: LKAKHSLDLKPLGSGLRWFAGKS*YLLVAL
Trigger: AAGTGCAACCAACAGATACAAACTCTTCCCAGCGAA...CCATCTCAGGCCAGAGCCAAGGGGCTTCAGGTCCAGGCTGTGTTTGGCTTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CAA 90 bp CAAACCCTCAAACCTGAGTACTGCTGGTCACGCATGTCCACAGCAAAGAGCCAGCTGACAAGCTGCGCATaGTCATGGGATTTGCGAGGT +
Preference number: 5 (lower is better)
Translates to: QTLKPEYCWSRMSTAKSQLTSCA*SWDLRG
Trigger: ACCTCGCAAATCCCATGACAATGCGCAGCTTGTCAG...CTGGCTCTTTGCTGTGGACATGCGTGACCAGCAGTACTCAGGTTTGAGGGTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR CAA 90 bp CAAACCCTCAAACCTGAGTACTGCTGGTCACGCATGTCCACAGCAAAGAGCCAGGCTGCACCAAGGGGATaGTCTGAATGGTCCATGACA +
Preference number: 5 (lower is better)
Translates to: QTLKPEYCWSRMSTAKSQAAPRG*SEWSMT
Trigger: TGTCATGGACCATTCAGACAATCCCCTTGGTGCAGC...CTGGCTCTTTGCTGTGGACATGCGTGACCAGCAGTACTCAGGTTTGAGGGTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR CAA 90 bp CTGAAAGCCAAACACAGCCTGGACCTGAAGCCCCTTGGCTCTGGCCTGAGATGGTCCCTAGTCAGGCATTaGAAGAGTGAAGAGTTCAAG +
Preference number: 5 (lower is better)
Translates to: LKAKHSLDLKPLGSGLRWSLVRH*KSEEFK
Trigger: CTTGAACTCTTCACTCTTCAAATGCCTGACTAGGGA...CCATCTCAGGCCAGAGCCAAGGGGCTTCAGGTCCAGGCTGTGTTTGGCTTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CAA 90 bp CTGAAAGCCAAACACAGCCTGGACCTGAAGCCCCTTGGCTCTGGCCTGAGATGGTGCATGCTATACGAGTaGGAATGTATTAGAGCTGGG +
Preference number: 5 (lower is better)
Translates to: LKAKHSLDLKPLGSGLRWCMLYE*ECIRAG
Trigger: CCCAGCTCTAATACATTCCAACTCGTATAGCATGCA...CCATCTCAGGCCAGAGCCAAGGGGCTTCAGGTCCAGGCTGTGTTTGGCTTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS GCA 90 bp TGGCTGCAAAAAGCAAGAAAGACCAAGAGGGCCCAGCTCCTGAACTaGACACCTGCCTGTTTCCGTCTGTTAGGAAAGCAAAGCTTCTGC +
Preference number: 5 (lower is better)
Translates to: WLQKARKTKRAQLLN*TPACFRLLGKQSFC
Trigger: GCAGAAGCTTTGCTTTCCTAACAGACGGAAACAGGCAGGTGTGCAGTTCAGGAGCTGGGCCCTCTTGGTCTTTCTTGCTTTTTGCAGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482291.1
CDS-3UTR CAA 90 bp ATGGAAACGATGGCAAAGCCACAGAGTCAATGCTGCCAGTCACAGGAGGCCTTGTGGCACAAGCCAGCCTaGACCGTTGCAATAAATGAG +
Preference number: 5 (lower is better)
Translates to: METMAKPQSQCCQSQEALWHKPA*TVAINE
Trigger: CTCATTTATTGCAACGGTCAAGGCTGGCTTGTGCCA...CAAGGCCTCCTGTGACTGGCAGCATTGACTCTGTGGCTTTGCCATCGTTTCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR CAA 90 bp CAAACCCTCAAACCTGAGTACTGCTGGTCACGCATGTCCACAGCAAAGAGCCAGCTCTTTTATGCCTTCTaGCCCATGTCTGAGAGGGTG +
Preference number: 5 (lower is better)
Translates to: QTLKPEYCWSRMSTAKSQLFYAF*PMSERV
Trigger: CACCCTCTCAGACATGGGCAAGAAGGCATAAAAGAG...CTGGCTCTTTGCTGTGGACATGCGTGACCAGCAGTACTCAGGTTTGAGGGTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR CAA 90 bp ATCCTGGTGTGGCTACACCTTAAGATTCCTGTCTGCAACCCAGGTTCTCACCAAGCCGATGGTGGTCCCTaGGAAATAAACCCCACTGAC +
Preference number: 5 (lower is better)
Translates to: ILVWLHLKIPVCNPGSHQADGGP*EINPTD
Trigger: GTCAGTGGGGTTTATTTCCAAGGGACCACCATCGGC...TTGGTGAGAACCTGGGTTGCAGACAGGAATCTTAAGGTGTAGCCACACCAGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CAA 90 bp GATTCTACTTGGGATCTCTTGAGCTGCATCTGGTACCATAAGCACAGCTGGGGGTTTCTCAACCGCCATTaGACAGCTACAGCCCCTGTC +
Preference number: 5 (lower is better)
Translates to: DSTWDLLSCIWYHKHSWGFLNRH*TATAPV
Trigger: GACAGGGGCTGTAGCTGTCAAATGGCGGTTGAGAAA...CCCCCAGCTGTGCTTATGGTACCAGATGCAGCTCAAGAGATCCCAAGTAGAATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CAA 90 bp ATCCTGGTGTGGCTACACCTTAAGATTCCTGTCTGCAACCCAGGTTCTCACCAACCGGCTGGCACCTCCTaGACACTGGATTTTTCCACA +
Preference number: 5 (lower is better)
Translates to: ILVWLHLKIPVCNPGSHQPAGTS*TLDFST
Trigger: TGTGGAAAAATCCAGTGTCAAGGAGGTGCCAGCCGG...TTGGTGAGAACCTGGGTTGCAGACAGGAATCTTAAGGTGTAGCCACACCAGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CAA 90 bp AATGTCCCCCAGCAGCCTGTCATTGTGTGTGAAACTCCTAGCCTGAGAGCCCCAAGCCTCTGGGCTACTTaGTGTCTAGTCACATTGACT +
Preference number: 5 (lower is better)
Translates to: NVPQQPVIVCETPSLRAPSLWAT*CLVTLT
Trigger: AGTCAATGTGACTAGACACAAAGTAGCCCAGAGGCT...TGGGGCTCTCAGGCTAGGAGTTTCACACACAATGACAGGCTGCTGGGGGACATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS TCA 90 bp GAGGGTGGTGGAAACACATTCTTTGCAGCGAGGTTTGGTGTGTTGTaGTGTGATCCACATGATCCCCGGACGCTTTTCAGCTTCTTCGCT +
Preference number: 5 (lower is better)
Translates to: EGGGNTFFAARFGVL*CDPHDPRTLFSFFA
Trigger: AGCGAAGAAGCTGAAAAGCGTCCGGGGATCATGTGGATCACATCACAACACACCAAACCTCGCTGCAAAGAATGTGTTTCCACCACCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368676.8
ENST00000368679.8
ENST00000448723.2
CDS TCA 90 bp GCTGCAGGGGGATGTTTGTTTCTATGGAAACGGCATTGGTACCAATaGCTGGCCGGCTGGCACCTCCTTGACACTGGATTTTTCCACATT +
Preference number: 5 (lower is better)
Translates to: AAGGCLFLWKRHWYQ*LAGWHLLDTGFFHI
Trigger: AATGTGGAAAAATCCAGTGTCAAGGAGGTGCCAGCCGGCCAGTCATTGGTACCAATGCCGTTTCCATAGAAACAAACATCCCCCTGCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000368676.8
ENST00000368679.8
ENST00000448723.2
CDS-3UTR CAA 90 bp GAACTGTGTTGTGTCTGTTGTCATGGAAACGATGGCAAAGCCACAGAGTCAATGAGCAAACTGTCCGAGTaGGCCCGGGGACTAGGAAGA +
Preference number: 5 (lower is better)
Translates to: ELCCVCCHGNDGKATESMSKLSE*ARGLGR
Trigger: TCTTCCTAGTCCCCGGGCCAACTCGGACAGTTTGCT...CATTGACTCTGTGGCTTTGCCATCGTTTCCATGACAACAGACACAACACAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR CAA 90 bp GATTCTACTTGGGATCTCTTGAGCTGCATCTGGTACCATAAGCACAGCTGGGGGGTACAGGTGGTGGCATaGCAGCAGCGATTCATACAT +
Preference number: 5 (lower is better)
Translates to: DSTWDLLSCIWYHKHSWGVQVVA*QQRFIH
Trigger: ATGTATGAATCGCTGCTGCAATGCCACCACCTGTAC...CCCCCAGCTGTGCTTATGGTACCAGATGCAGCTCAAGAGATCCCAAGTAGAATC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CAA 90 bp TGTTTCATTGCCATTCAGTTTGCTTGGATGGAGATGGAATGGGTGGCAGGGTCTCCGGCTGGCACCTCCTaGACACTGGATTTTTCCACA +
Preference number: 5 (lower is better)
Translates to: CFIAIQFAWMEMEWVAGSPAGTS*TLDFST
Trigger: TGTGGAAAAATCCAGTGTCAAGGAGGTGCCAGCCGG...AGACCCTGCCACCCATTCCATCTCCATCCAAGCAAACTGAATGGCAATGAAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR CAA 90 bp GATTCTACTTGGGATCTCTTGAGCTGCATCTGGTACCATAAGCACAGCTGGGGGGCTGCAGGGGGATGTTaGTTTCTATGGAAACGGCAT +
Preference number: 5 (lower is better)
Translates to: DSTWDLLSCIWYHKHSWGAAGGC*FLWKRH
Trigger: ATGCCGTTTCCATAGAAACAAACATCCCCCTGCAGC...CCCCCAGCTGTGCTTATGGTACCAGATGCAGCTCAAGAGATCCCAAGTAGAATC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CAA 90 bp TGTCCACAGCAAAGAGCCAGAGTTCACCGCCCTTTCTCCTACCTTCTTCTCCAGTTGTTAAATGAAGGGTaGGTGACTCTGTGGGTTCCC +
Preference number: 5 (lower is better)
Translates to: CPQQRARVHRPFSYLLLQLLNEG*VTLWVP
Trigger: GGGAACCCACAGAGTCACCAACCCTTCATTTAACAA...CTGGAGAAGAAGGTAGGAGAAAGGGCGGTGAACTCTGGCTCTTTGCTGTGGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR CAA 90 bp CTGAAAGCCAAACACAGCCTGGACCTGAAGCCCCTTGGCTCTGGCCTGAGATGGCTTTCCAATAAGGCCTaGATCAGAAAGCAAACACAT +
Preference number: 5 (lower is better)
Translates to: LKAKHSLDLKPLGSGLRWLSNKA*IRKQTH
Trigger: ATGTGTTTGCTTTCTGATCAAGGCCTTATTGGAAAG...CCATCTCAGGCCAGAGCCAAGGGGCTTCAGGTCCAGGCTGTGTTTGGCTTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CAA 90 bp ATGGTTCTCAGCATGGGGCTCCCAAACTTTCTTAGAGTGTCATTTGTTTTAGTAGAGCCTGCCTGCCAGTaGTCAAGGGGCACAGGGCCT +
Preference number: 5 (lower is better)
Translates to: MVLSMGLPNFLRVSFVLVEPACQ*SRGTGP
Trigger: AGGCCCTGTGCCCCTTGACAACTGGCAGGCAGGCTC...TACTAAAACAAATGACACTCTAAGAAAGTTTGGGAGCCCCATGCTGAGAACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CAA 90 bp CTGAAAGCCAAACACAGCCTGGACCTGAAGCCCCTTGGCTCTGGCCTGAGATGGGAACATCACATTCCATaGGTTGTAGTTTTTGCAAGC +
Preference number: 5 (lower is better)
Translates to: LKAKHSLDLKPLGSGLRWEHHIP*VVVFAS
Trigger: GCTTGCAAAAACTACAACCAATGGAATGTGATGTTC...CCATCTCAGGCCAGAGCCAAGGGGCTTCAGGTCCAGGCTGTGTTTGGCTTTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CAA 90 bp GATTCTACTTGGGATCTCTTGAGCTGCATCTGGTACCATAAGCACAGCTGGGGGGAGCTGGGTTCCCTTTaGTGTGTGTTTGTGTCACGT +
Preference number: 5 (lower is better)
Translates to: DSTWDLLSCIWYHKHSWGELGSL*CVFVSR
Trigger: ACGTGACACAAACACACACAAAAGGGAACCCAGCTC...CCCCCAGCTGTGCTTATGGTACCAGATGCAGCTCAAGAGATCCCAAGTAGAATC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CAA 90 bp CTGAAAGCCAAACACAGCCTGGACCTGAAGCCCCTTGGCTCTGGCCTGAGATGGCTCCTACAGTTTAATTaGCTGCTTTTGTGGTTTCTG +
Preference number: 5 (lower is better)
Translates to: LKAKHSLDLKPLGSGLRWLLQFN*LLLWFL
Trigger: CAGAAACCACAAAAGCAGCAAATTAAACTGTAGGAG...CCATCTCAGGCCAGAGCCAAGGGGCTTCAGGTCCAGGCTGTGTTTGGCTTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS TCA 90 bp CATGGCCACTTACCTGAGACCAGAACACGTGCTGAGACTGACTGCTaGATCAGAATATCCCCGTACATGTCCATGGTAGTAACAGTGACC +
Preference number: 5 (lower is better)
Translates to: HGHLPETRTRAETDC*IRISPYMSMVVTVT
Trigger: GGTCACTGTTACTACCATGGACATGTACGGGGATATTCTGATTCAGCAGTCAGTCTCAGCACGTGTTCTGGTCTCAGGTAAGTGGCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494661.1
CDS CCA 90 bp CAGGGGGATGTTTGTTTCTATGGAAACGGCATTGGTACCAATGACTaGCCGGCTGGCACCTCCTTGACACTGGATTTTTCCACATTTAGC +
Preference number: 5 (lower is better)
Translates to: QGDVCFYGNGIGTND*PAGTSLTLDFSTFS
Trigger: GCTAAATGTGGAAAAATCCAGTGTCAAGGAGGTGCCAGCCGGCCAGTCATTGGTACCAATGCCGTTTCCATAGAAACAAACATCCCCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000368676.8
ENST00000368679.8
ENST00000448723.2
CDS-3UTR CAA 90 bp AATGTCCCCCAGCAGCCTGTCATTGTGTGTGAAACTCCTAGCCTGAGAGCCCCAACATACTTAGTTGCCTaGAGGGTCTCTCTTTTATGC +
Preference number: 5 (lower is better)
Translates to: NVPQQPVIVCETPSLRAPTYLVA*RVSLLC
Trigger: GCATAAAAGAGAGACCCTCAAGGCAACTAAGTATGT...TGGGGCTCTCAGGCTAGGAGTTTCACACACAATGACAGGCTGCTGGGGGACATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CAA 90 bp TGTCCACAGCAAAGAGCCAGAGTTCACCGCCCTTTCTCCTACCTTCTTCTCCAGTTCCAGATCTTTTCCTaGCCTCTGAAACTCTCGGTT +
Preference number: 5 (lower is better)
Translates to: CPQQRARVHRPFSYLLLQFQIFS*PLKLSV
Trigger: AACCGAGAGTTTCAGAGGCAAGGAAAAGATCTGGAA...CTGGAGAAGAAGGTAGGAGAAAGGGCGGTGAACTCTGGCTCTTTGCTGTGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR CAA 90 bp ACTGAAGCATGTCCATGTTTTAGCAGAAGCTCAACCAGGAAGTCGCTGCCCTTCGTACAGGTGGTGGCATaGCAGCAGCGATTCATACAT +
Preference number: 5 (lower is better)
Translates to: TEACPCFSRSSTRKSLPFVQVVA*QQRFIH
Trigger: ATGTATGAATCGCTGCTGCAATGCCACCACCTGTAC...GAAGGGCAGCGACTTCCTGGTTGAGCTTCTGCTAAAACATGGACATGCTTCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR CAA 90 bp TGTTTCATTGCCATTCAGTTTGCTTGGATGGAGATGGAATGGGTGGCAGGGTCTTCTATGGAAACGGCATaGGTACCAATGACTGGCCGG +
Preference number: 5 (lower is better)
Translates to: CFIAIQFAWMEMEWVAGSSMETA*VPMTGR
Trigger: CCGGCCAGTCATTGGTACCAATGCCGTTTCCATAGA...AGACCCTGCCACCCATTCCATCTCCATCCAAGCAAACTGAATGGCAATGAAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR CAA 90 bp ATGGAAACGATGGCAAAGCCACAGAGTCAATGCTGCCAGTCACAGGAGGCCTTGTATCAGAGCATTAAGTaGCAGCCAGAGACCAGTCAT +
Preference number: 5 (lower is better)
Translates to: METMAKPQSQCCQSQEALYQSIK*QPETSH
Trigger: ATGACTGGTCTCTGGCTGCAACTTAATGCTCTGATA...CAAGGCCTCCTGTGACTGGCAGCATTGACTCTGTGGCTTTGCCATCGTTTCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR CAA 90 bp GCCCCGAGAACTGTGTTGTGTCTGTTGTCATGGAAACGATGGCAAAGCCACAGATGCCATTCAGTTTGCTaGGATGGAGATGGAATGGGT +
Preference number: 5 (lower is better)
Translates to: APRTVLCLLSWKRWQSHRCHSVC*DGDGMG
Trigger: ACCCATTCCATCTCCATCCAAGCAAACTGAATGGCA...TCTGTGGCTTTGCCATCGTTTCCATGACAACAGACACAACACAGTTCTCGGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR CAA 90 bp ATGGTTCTCAGCATGGGGCTCCCAAACTTTCTTAGAGTGTCATTTGTTTTAGTATGCCTAAGTGCAGGCTaGGCTGGCAGGGGTCTGGCA +
Preference number: 5 (lower is better)
Translates to: MVLSMGLPNFLRVSFVLVCLSAG*AGRGLA
Trigger: TGCCAGACCCCTGCCAGCCAAGCCTGCACTTAGGCA...TACTAAAACAAATGACACTCTAAGAAAGTTTGGGAGCCCCATGCTGAGAACCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CAA 90 bp AATGTCCCCCAGCAGCCTGTCATTGTGTGTGAAACTCCTAGCCTGAGAGCCCCAGAGAAAAAGAAGTGCTaGGCATTTCTATCAAGCACC +
Preference number: 5 (lower is better)
Translates to: NVPQQPVIVCETPSLRAPEKKKC*AFLSST
Trigger: GGTGCTTGATAGAAATGCCAAGCACTTCTTTTTCTC...TGGGGCTCTCAGGCTAGGAGTTTCACACACAATGACAGGCTGCTGGGGGACATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CAA 90 bp AATGTCCCCCAGCAGCCTGTCATTGTGTGTGAAACTCCTAGCCTGAGAGCCCCAGTCATGAATACTATGTaGCCTAGATACAGTGGGGAA +
Preference number: 5 (lower is better)
Translates to: NVPQQPVIVCETPSLRAPVMNTM*PRYSGE
Trigger: TTCCCCACTGTATCTAGGCAACATAGTATTCATGAC...TGGGGCTCTCAGGCTAGGAGTTTCACACACAATGACAGGCTGCTGGGGGACATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CAA 90 bp GATTCTACTTGGGATCTCTTGAGCTGCATCTGGTACCATAAGCACAGCTGGGGGTTGTGTCTAGTCACATaGACTTTCCAGGTGATGGCC +
Preference number: 5 (lower is better)
Translates to: DSTWDLLSCIWYHKHSWGLCLVT*TFQVMA
Trigger: GGCCATCACCTGGAAAGTCAATGTGACTAGACACAA...CCCCCAGCTGTGCTTATGGTACCAGATGCAGCTCAAGAGATCCCAAGTAGAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS TCA 90 bp CACAATAAGTCCCCTGAGACCAGAACACGTGCTGAGACTGACTGCTaGATCAGAATATCCCCGTACATGTCCATGGTAGTAACAGTGACC +
Preference number: 5 (lower is better)
Translates to: HNKSPETRTRAETDC*IRISPYMSMVVTVT
Trigger: GGTCACTGTTACTACCATGGACATGTACGGGGATATTCTGATTCAGCAGTCAGTCTCAGCACGTGTTCTGGTCTCAGGGGACTTATTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368676.8
ENST00000368679.8
ENST00000448723.2
CDS TCA 90 bp ATCTTCCTCCAGTCCAGAAATTCATGGAGGCTGGTGAATGGGTCCTaGCTTACAGAGCATTTGTCCATGTCATTCCACACTTCCACGCCT +
Preference number: 5 (lower is better)
Translates to: IFLQSRNSWRLVNGS*LTEHLSMSFHTSTP
Trigger: AGGCGTGGAAGTGTGGAATGACATGGACAAATGCTCTGTAAGTCAGGACCCATTCACCAGCCTCCATGAATTTCTGGACTGGAGGAAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368676.8
ENST00000368679.8
ENST00000448723.2
CDS GCA 90 bp AAAGGAACTCTTCGAGACTTTGCCACAGTTGCCATAAGGATCACCTaGAGAATTGACTCTCTCAAAGCAGATCCCAGGGGCAGGTTTAGC +
Preference number: 5 (lower is better)
Translates to: KGTLRDFATVAIRIT*RIDSLKADPRGRFS
Trigger: GCTAAACCTGCCCCTGGGATCTGCTTTGAGAGAGTCAATTCTGCAGGTGATCCTTATGGCAACTGTGGCAAAGTCTCGAAGAGTTCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368676.8
ENST00000368679.8
ENST00000448723.2
CDS CCA 90 bp CTTGAGGGTCTCTCTTTTATGCCTTCTTGCCCATGTCTGAGAGGGTaGTGGAAACACATTCTTTGCAGCGAGGTTTGGTGTGTTGTGATG +
Preference number: 5 (lower is better)
Translates to: LEGLSFMPSCPCLRG*WKHILCSEVWCVVM
Trigger: CATCACAACACACCAAACCTCGCTGCAAAGAATGTGTTTCCACCACCCTCTCAGACATGGGCAAGAAGGCATAAAAGAGAGACCCTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368676.8
ENST00000368679.8
ENST00000448723.2
CDS-3UTR CAA 90 bp TTGTTAAATGAAGGGTTGGTGACTCTGTGGGTTCCCTGGCTTTCTGCAAACCCTGACATCAGTACCGTCTaGCAGATAGTGGGTTTCCGT +
Preference number: 5 (lower is better)
Translates to: LLNEGLVTLWVPWLSANPDISTV*QIVGFR
Trigger: ACGGAAACCCACTATCTGCAAGACGGTACTGATGTC...AGGGTTTGCAGAAAGCCAGGGAACCCACAGAGTCACCAACCCTTCATTTAACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR CAA 90 bp ACAGCAAAGAGCCAGAGTTCACCGCCCTTTCTCCTACCTTCTTCTCCAGTTTGTTCTTTGCAGCGAGGTTaGGTGTGTTGTGATGTGATC +
Preference number: 5 (lower is better)
Translates to: TAKSQSSPPFLLPSSPVCSLQRG*VCCDVI
Trigger: GATCACATCACAACACACCAAACCTCGCTGCAAAGA...ACAAACTGGAGAAGAAGGTAGGAGAAAGGGCGGTGAACTCTGGCTCTTTGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR CAA 90 bp ACTGAAGCATGTCCATGTTTTAGCAGAAGCTCAACCAGGAAGTCGCTGCCCTTCGTGGAAACACATTCTTaGCAGCGAGGTTTGGTGTGT +
Preference number: 5 (lower is better)
Translates to: TEACPCFSRSSTRKSLPFVETHS*QRGLVC
Trigger: ACACACCAAACCTCGCTGCAAAGAATGTGTTTCCAC...GAAGGGCAGCGACTTCCTGGTTGAGCTTCTGCTAAAACATGGACATGCTTCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR CAA 90 bp GTCCACAGCAAAGAGCCAGAGTTCACCGCCCTTTCTCCTACCTTCTTCTCCAGTACATACTTAGTTGCCTaGAGGGTCTCTCTTTTATGC +
Preference number: 5 (lower is better)
Translates to: VHSKEPEFTALSPTFFSSTYLVA*RVSLLC
Trigger: GCATAAAAGAGAGACCCTCAAGGCAACTAAGTATGT...ACTGGAGAAGAAGGTAGGAGAAAGGGCGGTGAACTCTGGCTCTTTGCTGTGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR CAA 90 bp GATTCTACTTGGGATCTCTTGAGCTGCATCTGGTACCATAAGCACAGCTGGGGGTTCCAGATCTTTTCCTaGCCTCTGAAACTCTCGGTT +
Preference number: 5 (lower is better)
Translates to: DSTWDLLSCIWYHKHSWGFQIFS*PLKLSV
Trigger: AACCGAGAGTTTCAGAGGCAAGGAAAAGATCTGGAA...CCCCCAGCTGTGCTTATGGTACCAGATGCAGCTCAAGAGATCCCAAGTAGAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CAA 90 bp CAGCAAAGAGCCAGAGTTCACCGCCCTTTCTCCTACCTTCTTCTCCAGTTTGTTGCATTGTCATGGGATTaGCGAGGTAGAAGCTTCATC +
Preference number: 5 (lower is better)
Translates to: QQRARVHRPFSYLLLQFVALSWD*RGRSFI
Trigger: GATGAAGCTTCTACCTCGCAAATCCCATGACAATGC...AACAAACTGGAGAAGAAGGTAGGAGAAAGGGCGGTGAACTCTGGCTCTTTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR CAA 90 bp CCTGCTACTCTCTCAGGAGCAGCACTGAAGCATGTCCATGTTTTAGCAGAAGCTTCTCTCATCTCGCATTaGGCAAAGGAACTCTTCGAG +
Preference number: 5 (lower is better)
Translates to: PATLSGAALKHVHVLAEASLISH*AKELFE
Trigger: CTCGAAGAGTTCCTTTGCCAAATGCGAGATGAGAGA...AGCTTCTGCTAAAACATGGACATGCTTCAGTGCTGCTCCTGAGAGAGTAGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR CAA 90 bp ATCCTGGTGTGGCTACACCTTAAGATTCCTGTCTGCAACCCAGGTTCTCACCAATCTCTCATCTCGCATTaGGCAAAGGAACTCTTCGAG +
Preference number: 5 (lower is better)
Translates to: ILVWLHLKIPVCNPGSHQSLISH*AKELFE
Trigger: CTCGAAGAGTTCCTTTGCCAAATGCGAGATGAGAGA...TTGGTGAGAACCTGGGTTGCAGACAGGAATCTTAAGGTGTAGCCACACCAGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CAA 90 bp GTCCACAGCAAAGAGCCAGAGTTCACCGCCCTTTCTCCTACCTTCTTCTCCAGTTCATTGCCATTCAGTTaGCTTGGATGGAGATGGAAT +
Preference number: 5 (lower is better)
Translates to: VHSKEPEFTALSPTFFSSSLPFS*LGWRWN
Trigger: ATTCCATCTCCATCCAAGCAAACTGAATGGCAATGA...ACTGGAGAAGAAGGTAGGAGAAAGGGCGGTGAACTCTGGCTCTTTGCTGTGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR CAA 90 bp TGTCCACAGCAAAGAGCCAGAGTTCACCGCCCTTTCTCCTACCTTCTTCTCCAGCTCCAGTTTGTTTCATaGCCATTCAGTTTGCTTGGA +
Preference number: 5 (lower is better)
Translates to: CPQQRARVHRPFSYLLLQLQFVS*PFSLLG
Trigger: TCCAAGCAAACTGAATGGCAATGAAACAAACTGGAG...CTGGAGAAGAAGGTAGGAGAAAGGGCGGTGAACTCTGGCTCTTTGCTGTGGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR CAA 90 bp TTTCCAGGTGATGGCCCTACAAAACTCAAACCACCTCTATTATTCATGCCTATAACCTTGGTTATCTGCTaGCCGGATGGGGCCGCTGTC +
Preference number: 5 (lower is better)
Translates to: FPGDGPTKLKPPLLFMPITLVIC*PDGAAV
Trigger: GACAGCGGCCCCATCCGGCAAGCAGATAACCAAGGT...TATAGGCATGAATAATAGAGGTGGTTTGAGTTTTGTAGGGCCATCACCTGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CAA 90 bp ATCCTGGTGTGGCTACACCTTAAGATTCCTGTCTGCAACCCAGGTTCTCACCAATCTACTTGGGATCTCTaGAGCTGCATCTGGTACCAT +
Preference number: 5 (lower is better)
Translates to: ILVWLHLKIPVCNPGSHQSTWDL*SCIWYH
Trigger: ATGGTACCAGATGCAGCTCAAGAGATCCCAAGTAGA...TTGGTGAGAACCTGGGTTGCAGACAGGAATCTTAAGGTGTAGCCACACCAGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CAA 90 bp TTTCCAGGTGATGGCCCTACAAAACTCAAACCACCTCTATTATTCATGCCTATAAGCAAACTGTCCGAGTaGGCCCGGGGACTAGGAAGA +
Preference number: 5 (lower is better)
Translates to: FPGDGPTKLKPPLLFMPISKLSE*ARGLGR
Trigger: TCTTCCTAGTCCCCGGGCCAACTCGGACAGTTTGCT...TATAGGCATGAATAATAGAGGTGGTTTGAGTTTTGTAGGGCCATCACCTGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CAA 90 bp AATGTCCCCCAGCAGCCTGTCATTGTGTGTGAAACTCCTAGCCTGAGAGCCCCAGTTTGTATCTGTTGGTaGCACTTTTCATTGGTTCTA +
Preference number: 5 (lower is better)
Translates to: NVPQQPVIVCETPSLRAPVCICW*HFSLVL
Trigger: TAGAACCAATGAAAAGTGCAACCAACAGATACAAAC...TGGGGCTCTCAGGCTAGGAGTTTCACACACAATGACAGGCTGCTGGGGGACATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CAA 90 bp CAGCAAAGAGCCAGAGTTCACCGCCCTTTCTCCTACCTTCTTCTCCAGTTTGTTTTCGCTGGGAAGAGTTaGTATCTGTTGGTTGCACTT +
Preference number: 5 (lower is better)
Translates to: QQRARVHRPFSYLLLQFVFAGKS*YLLVAL
Trigger: AAGTGCAACCAACAGATACAAACTCTTCCCAGCGAA...AACAAACTGGAGAAGAAGGTAGGAGAAAGGGCGGTGAACTCTGGCTCTTTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR CAA 90 bp TGTTTCATTGCCATTCAGTTTGCTTGGATGGAGATGGAATGGGTGGCAGGGTCTGGATCACCTGCAGAATaGACTCTCTCAAAGCAGATC +
Preference number: 5 (lower is better)
Translates to: CFIAIQFAWMEMEWVAGSGSPAE*TLSKQI
Trigger: GATCTGCTTTGAGAGAGTCAATTCTGCAGGTGATCC...AGACCCTGCCACCCATTCCATCTCCATCCAAGCAAACTGAATGGCAATGAAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR CAA 90 bp CCTGCTACTCTCTCAGGAGCAGCACTGAAGCATGTCCATGTTTTAGCAGAAGCTACTGTGTTGTGTCTGTaGTCATGGAAACGATGGCAA +
Preference number: 5 (lower is better)
Translates to: PATLSGAALKHVHVLAEATVLCL*SWKRWQ
Trigger: TTGCCATCGTTTCCATGACAACAGACACAACACAGT...AGCTTCTGCTAAAACATGGACATGCTTCAGTGCTGCTCCTGAGAGAGTAGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR CAA 90 bp CTATTTTATGCAGTAATGGCCACGGGGGATGGAGTTAGGCTCTTACATTGTTTTAGTCGCTGCCCTTCCTaGCACTGTTTCTGCAGACGT +
Preference number: 5 (lower is better)
Translates to: LFYAVMATGDGVRLLHCFSRCPS*HCFCRR
Trigger: ACGTCTGCAGAAACAGTGCAAGGAAGGGCAGCGACT...AAAACAATGTAAGAGCCTAACTCCATCCCCCGTGGCCATTACTGCATAAAATAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR CAA 90 bp ATGGTTCTCAGCATGGGGCTCCCAAACTTTCTTAGAGTGTCATTTGTTTTAGTAGGGACATTCAGGCCGTaGAGGGGTCTGCTGATGTCA +
Preference number: 5 (lower is better)
Translates to: MVLSMGLPNFLRVSFVLVGTFRP*RGLLMS
Trigger: TGACATCAGCAGACCCCTCAACGGCCTGAATGTCCC...TACTAAAACAAATGACACTCTAAGAAAGTTTGGGAGCCCCATGCTGAGAACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CAA 90 bp ATGGTTCTCAGCATGGGGCTCCCAAACTTTCTTAGAGTGTCATTTGTTTTAGTAGAAGCACTCGCTGAGTaGACTGGGGCTGAGGGACAT +
Preference number: 5 (lower is better)
Translates to: MVLSMGLPNFLRVSFVLVEALAE*TGAEGH
Trigger: ATGTCCCTCAGCCCCAGTCAACTCAGCGAGTGCTTC...TACTAAAACAAATGACACTCTAAGAAAGTTTGGGAGCCCCATGCTGAGAACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS CCA 90 bp AAGCTTCATCTTCCTCCAGTCCAGAAATTCATGGAGGCTGGTGAATaGGTCCTGACTTACAGAGCATTTGTCCATGTCATTCCACACTTC +
Preference number: 5 (lower is better)
Translates to: KLHLPPVQKFMEAGE*VLTYRAFVHVIPHF
Trigger: GAAGTGTGGAATGACATGGACAAATGCTCTGTAAGTCAGGACCCATTCACCAGCCTCCATGAATTTCTGGACTGGAGGAAGATGAAGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368676.8
ENST00000368679.8
ENST00000448723.2
CDS-3UTR CAA 90 bp GATTCTACTTGGGATCTCTTGAGCTGCATCTGGTACCATAAGCACAGCTGGGGGCCCTTTTGTGTGTGTTaGTGTCACGTGTTTAGTTTA +
Preference number: 5 (lower is better)
Translates to: DSTWDLLSCIWYHKHSWGPFCVC*CHVFSL
Trigger: TAAACTAAACACGTGACACAAACACACACAAAAGGG...CCCCCAGCTGTGCTTATGGTACCAGATGCAGCTCAAGAGATCCCAAGTAGAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CAA 90 bp ATCCTGGTGTGGCTACACCTTAAGATTCCTGTCTGCAACCCAGGTTCTCACCAAGACTCGTCAGGAGTATaGACTCTCCTACAGTTTAAT +
Preference number: 5 (lower is better)
Translates to: ILVWLHLKIPVCNPGSHQDSSGV*TLLQFN
Trigger: ATTAAACTGTAGGAGAGTCAATACTCCTGACGAGTC...TTGGTGAGAACCTGGGTTGCAGACAGGAATCTTAAGGTGTAGCCACACCAGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CAA 90 bp ATGGTTCTCAGCATGGGGCTCCCAAACTTTCTTAGAGTGTCATTTGTTTTAGTATGGTCAGCACTAGTGTaGGGAGACTTCTGGGAGGGA +
Preference number: 5 (lower is better)
Translates to: MVLSMGLPNFLRVSFVLVWSALV*GDFWEG
Trigger: TCCCTCCCAGAAGTCTCCCAACACTAGTGCTGACCA...TACTAAAACAAATGACACTCTAAGAAAGTTTGGGAGCCCCATGCTGAGAACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CAA 90 bp CACAGCAAAGAGCCAGAGTTCACCGCCCTTTCTCCTACCTTCTTCTCCAGTTTGAAGAGTTTGTATCTGTaGGTTGCACTTTTCATTGGT +
Preference number: 5 (lower is better)
Translates to: HSKEPEFTALSPTFFSSLKSLYL*VALFIG
Trigger: ACCAATGAAAAGTGCAACCAACAGATACAAACTCTT...CAAACTGGAGAAGAAGGTAGGAGAAAGGGCGGTGAACTCTGGCTCTTTGCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR CAA 90 bp ATGGTTCTCAGCATGGGGCTCCCAAACTTTCTTAGAGTGTCATTTGTTTTAGTACTGACAAGCTGCGCATaGTCATGGGATTTGCGAGGT +
Preference number: 5 (lower is better)
Translates to: MVLSMGLPNFLRVSFVLVLTSCA*SWDLRG
Trigger: ACCTCGCAAATCCCATGACAATGCGCAGCTTGTCAG...TACTAAAACAAATGACACTCTAAGAAAGTTTGGGAGCCCCATGCTGAGAACCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CAA 90 bp TTTCCAGGTGATGGCCCTACAAAACTCAAACCACCTCTATTATTCATGCCTATAGCTGCACCAAGGGGATaGTCTGAATGGTCCATGACA +
Preference number: 5 (lower is better)
Translates to: FPGDGPTKLKPPLLFMPIAAPRG*SEWSMT
Trigger: TGTCATGGACCATTCAGACAATCCCCTTGGTGCAGC...TATAGGCATGAATAATAGAGGTGGTTTGAGTTTTGTAGGGCCATCACCTGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CAA 90 bp CTATTTTATGCAGTAATGGCCACGGGGGATGGAGTTAGGCTCTTACATTGTTTTGCTGCAGGGGGATGTTaGTTTCTATGGAAACGGCAT +
Preference number: 5 (lower is better)
Translates to: LFYAVMATGDGVRLLHCFAAGGC*FLWKRH
Trigger: ATGCCGTTTCCATAGAAACAAACATCCCCCTGCAGC...AAAACAATGTAAGAGCCTAACTCCATCCCCCGTGGCCATTACTGCATAAAATAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR CAA 90 bp CTATTTTATGCAGTAATGGCCACGGGGGATGGAGTTAGGCTCTTACATTGTTTTGCCCCGAGAACTGTGTaGTGTCTGTTGTCATGGAAA +
Preference number: 5 (lower is better)
Translates to: LFYAVMATGDGVRLLHCFAPRTV*CLLSWK
Trigger: TTTCCATGACAACAGACACAACACAGTTCTCGGGGC...AAAACAATGTAAGAGCCTAACTCCATCCCCCGTGGCCATTACTGCATAAAATAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR CAA 90 bp ATTGCCATTCAGTTTGCTTGGATGGAGATGGAATGGGTGGCAGGGTCTCTGATATTTATGATCAGTTCTTaGCTTTCCCGTTGTAGTCGA +
Preference number: 5 (lower is better)
Translates to: IAIQFAWMEMEWVAGSLIFMISS*LSRCSR
Trigger: TCGACTACAACGGGAAAGCAAAGAACTGATCATAAA...TATCAGAGACCCTGCCACCCATTCCATCTCCATCCAAGCAAACTGAATGGCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR CAA 90 bp ACTGAAGCATGTCCATGTTTTAGCAGAAGCTCAACCAGGAAGTCGCTGCCCTTCTGGTTGCACTTTTCATaGGTTCTAAGACATAGCTTT +
Preference number: 5 (lower is better)
Translates to: TEACPCFSRSSTRKSLPFWLHFS*VLRHSF
Trigger: AAAGCTATGTCTTAGAACCAATGAAAAGTGCAACCA...GAAGGGCAGCGACTTCCTGGTTGAGCTTCTGCTAAAACATGGACATGCTTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR CAA 90 bp ATGGTTCTCAGCATGGGGCTCCCAAACTTTCTTAGAGTGTCATTTGTTTTAGTAGGGTCAAGTTCTGGCTaGTCTAGTGTTCCAGTCTCT +
Preference number: 5 (lower is better)
Translates to: MVLSMGLPNFLRVSFVLVGSSSG*SSVPVS
Trigger: AGAGACTGGAACACTAGACAAGCCAGAACTTGACCC...TACTAAAACAAATGACACTCTAAGAAAGTTTGGGAGCCCCATGCTGAGAACCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CAA 90 bp ATGGTTCTCAGCATGGGGCTCCCAAACTTTCTTAGAGTGTCATTTGTTTTAGTAGGATCACCTGCAGAATaGACTCTCTCAAAGCAGATC +
Preference number: 5 (lower is better)
Translates to: MVLSMGLPNFLRVSFVLVGSPAE*TLSKQI
Trigger: GATCTGCTTTGAGAGAGTCAATTCTGCAGGTGATCC...TACTAAAACAAATGACACTCTAAGAAAGTTTGGGAGCCCCATGCTGAGAACCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CAA 90 bp GAACTGTGTTGTGTCTGTTGTCATGGAAACGATGGCAAAGCCACAGAGTCAATGACCTTCTTCTCCAGTTaGTTTCATTGCCATTCAGTT +
Preference number: 5 (lower is better)
Translates to: ELCCVCCHGNDGKATESMTFFSS*FHCHSV
Trigger: AACTGAATGGCAATGAAACAAACTGGAGAAGAAGGT...CATTGACTCTGTGGCTTTGCCATCGTTTCCATGACAACAGACACAACACAGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS TCA 90 bp GGGAATGGCATTTGTTTGACAGGGTCTTATGGAGTATGCACTCACTaGATGCAAACATCACACCTTAAATGGCTGCAAAAAGCAAGAAAG +
Preference number: 5 (lower is better)
Translates to: GNGICLTGSYGVCTH*MQTSHLKWLQKARK
Trigger: CTTTCTTGCTTTTTGCAGCCATTTAAGGTGTGATGTTTGCATTCAGTGAGTGCATACTCCATAAGACCCTGTCAAACAAATGCCATTCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482291.1
CDS-3UTR CAA 90 bp GAACTGTGTTGTGTCTGTTGTCATGGAAACGATGGCAAAGCCACAGAGTCAATGGTTTGTATCTGTTGGTaGCACTTTTCATTGGTTCTA +
Preference number: 5 (lower is better)
Translates to: ELCCVCCHGNDGKATESMVCICW*HFSLVL
Trigger: TAGAACCAATGAAAAGTGCAACCAACAGATACAAAC...CATTGACTCTGTGGCTTTGCCATCGTTTCCATGACAACAGACACAACACAGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS-3UTR CAA 90 bp ATGGTTCTCAGCATGGGGCTCCCAAACTTTCTTAGAGTGTCATTTGTTTTAGTACAACTGAGATTCTACTaGGGATCTCTTGAGCTGCAT +
Preference number: 5 (lower is better)
Translates to: MVLSMGLPNFLRVSFVLVQLRFY*GSLELH
Trigger: ATGCAGCTCAAGAGATCCCAAGTAGAATCTCAGTTG...TACTAAAACAAATGACACTCTAAGAAAGTTTGGGAGCCCCATGCTGAGAACCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CAA 90 bp ATGGTTCTCAGCATGGGGCTCCCAAACTTTCTTAGAGTGTCATTTGTTTTAGTAAATGGAAGTAGTGATTaGACTGTCAAACTGGAGATG +
Preference number: 5 (lower is better)
Translates to: MVLSMGLPNFLRVSFVLVNGSSD*TVKLEM
Trigger: CATCTCCAGTTTGACAGTCAAATCACTACTTCCATT...TACTAAAACAAATGACACTCTAAGAAAGTTTGGGAGCCCCATGCTGAGAACCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS CCA 90 bp CCTTGTATTTACAGGCCTCAGGTCCCATTTGTCAGTGACAGCAATTaGTTAATGTTTTCAGAGTTAGGATTCTGGAATGTTTTGATAAAG +
Preference number: 5 (lower is better)
Translates to: PCIYRPQVPFVSDSN*LMFSELGFWNVLIK
Trigger: CTTTATCAAAACATTCCAGAATCCTAACTCTGAAAACATTAACCAATTGCTGTCACTGACAAATGGGACCTGAGGCCTGTAAATACAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485388.2
CDS-3UTR CAA 90 bp ATGGTTCTCAGCATGGGGCTCCCAAACTTTCTTAGAGTGTCATTTGTTTTAGTATGGTTGCACTTTTCATaGGTTCTAAGACATAGCTTT +
Preference number: 5 (lower is better)
Translates to: MVLSMGLPNFLRVSFVLVWLHFS*VLRHSF
Trigger: AAAGCTATGTCTTAGAACCAATGAAAAGTGCAACCA...TACTAAAACAAATGACACTCTAAGAAAGTTTGGGAGCCCCATGCTGAGAACCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS-3UTR CAA 90 bp TTTCCAGGTGATGGCCCTACAAAACTCAAACCACCTCTATTATTCATGCCTATAAAGAGTTTGTATCTGTaGGTTGCACTTTTCATTGGT +
Preference number: 5 (lower is better)
Translates to: FPGDGPTKLKPPLLFMPIKSLYL*VALFIG
Trigger: ACCAATGAAAAGTGCAACCAACAGATACAAACTCTT...TATAGGCATGAATAATAGAGGTGGTTTGAGTTTTGTAGGGCCATCACCTGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368679.8
CDS GCA 72 bp GGCAGCGGGCGCGCTGCCATCGTCGCCGGCCTTCAGTaGAGCAGCTCTCGGGCCCGGCGGCGAGCGCTGCAC +
Preference number: 6 (lower is better)
Translates to: GSGRAAIVAGLQ*SSSRARRRALH
Trigger: GTGCAGCGCTCGCCGCCGGGCCCGAGAGCTGCTGCACTGAAGGCCGGCGACGATGGCAGCGCGCCCGCTGCC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368676.8
ENST00000368679.8
ENST00000448723.2
CDS GCA 72 bp GAGCCGGGGCCGGGCGTCGCGACCGGAGGGATTTCCTaGCTCGGCGAGTCAGCTCCGGAGCCCTCGCGCAGC +
Preference number: 6 (lower is better)
Translates to: EPGPGVATGGIS*LGESAPEPSRS
Trigger: GCTGCGCGAGGGCTCCGGAGCTGACTCGCCGAGGCAGGAAATCCCTCCGGTCGCGACGCCCGGCCCCGGCTC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368676.8
ENST00000368679.8
ENST00000448723.2
CDS GCA 72 bp AGGCTTGGCTGGCAGGGGTCTGGCAGGGACGCTAGGTaGACGTGGAGCCCGGTGGAGGGGAGGAAGCACTCG +
Preference number: 6 (lower is better)
Translates to: RLGWQGSGRDAR*TWSPVEGRKHS
Trigger: CGAGTGCTTCCTCCCCTCCACCGGGCTCCACGTGCACCTAGCGTCCCTGCCAGACCCCTGCCAGCCAAGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368679.8
ENST00000448723.2
CDS GCA 72 bp CAGATGAGTGTCAGTGAGGCAGTAGACGCATGCTCCTaGGATCCCACGGGCTCCTGGCCCTGGCCGCGCTCC +
Preference number: 6 (lower is better)
Translates to: QMSVSEAVDACS*DPTGSWPWPRS
Trigger: GGAGCGCGGCCAGGGCCAGGAGCCCGTGGGATCGCAGGAGCATGCGTCTACTGCCTCACTGACACTCATCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS CCA 72 bp GGCTGGGCAGTGAGGGCTGGCCCCTGTGCAGAACTCTaGGAGGTCACAGGAGTTGCTGGAGTCCCTGCACGC +
Preference number: 6 (lower is better)
Translates to: GWAVRAGPCAEL*EVTGVAGVPAR
Trigger: GCGTGCAGGGACTCCAGCAACTCCTGTGACCTCCCAGAGTTCTGCACAGGGGCCAGCCCTCACTGCCCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368676.8
ENST00000368679.8
ENST00000448723.2
ENST00000467145.1
ENST00000482291.1
CDS CCA 72 bp AGCCCTGGGTCCGGCATGTCATCGCCCAAGTACACGTaGGTCCCCCGGCACAGAATCCGGCCTCCTTGCTGC +
Preference number: 6 (lower is better)
Translates to: SPGSGMSSPKYT*VPRHRIRPPCC
Trigger: GCAGCAAGGAGGCCGGATTCTGTGCCGGGGGACCCACGTGTACTTGGGCGATGACATGCCGGACCCAGGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368676.8
ENST00000368679.8
ENST00000448723.2
CDS CAA 72 bp GCCTTTTCCAAGGTGGCCGAGGTGAGCCTGACAGGGTaGGAAGCCACGGGGTGGCCGGGAAGGGCGCACACA +
Preference number: 6 (lower is better)
Translates to: AFSKVAEVSLTG*EATGWPGRAHT
Trigger: TGTGTGCGCCCTTCCCGGCCACCCCGTGGCTTCCAACCCTGTCAGGCTCACCTCGGCCACCTTGGAAAAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368679.8
ENST00000448723.2
CDS CAA 72 bp AGGTCTGAGGGGTGCCAGGCGGAGCCCAGTCTCCCATaGTCCTGGGGTCCTGGCCAAGGCATGAGTGAGCCG +
Preference number: 6 (lower is better)
Translates to: RSEGCQAEPSLP*SWGPGQGMSEP
Trigger: CGGCTCACTCATGCCTTGGCCAGGACCCCAGGACAATGGGAGACTGGGCTCCGCCTGGCACCCCTCAGACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368679.8
ENST00000448723.2
CDS CCA 72 bp CCAGGTCTGCCAGTGCCTCTCCTGATGCCGAGCTTGTaGCGGCCACGTACCTGGTCCCCAGAGCGTGACACA +
Preference number: 6 (lower is better)
Translates to: PGLPVPLLMPSL*RPRTWSPERDT
Trigger: TGTGTCACGCTCTGGGGACCAGGTACGTGGCCGCCACAAGCTCGGCATCAGGAGAGGCACTGGCAGACCTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482291.1
CDS CAA 72 bp GGCGGTGTGGGTGGATCTGGGCACTTGGTGTGGATATaGTGGAGCAGGTCTGAGGGGTGCCAGGCGGAGCCC +
Preference number: 6 (lower is better)
Translates to: GGVGGSGHLVWI*WSRSEGCQAEP
Trigger: GGGCTCCGCCTGGCACCCCTCAGACCTGCTCCACAATATCCACACCAAGTGCCCAGATCCACCCACACCGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368679.8
ENST00000448723.2
CDS CAA 90 bp TGTGCGTGCGTGCGCGCGCGCGCGCCGTTCTGGCACAAGCCAGCCTaGACCGTTGCAATAAATGAGCAAACTGTCCGAGTTGGCCCGGGG +
Preference number: 6 (lower is better)
Translates to: CACVRARAPFWHKPA*TVAINEQTVRVGPG
Trigger: CCCCGGGCCAACTCGGACAGTTTGCTCATTTATTGCAACGGTCAAGGCTGGCTTGTGCCAGAACGGCGCGCGCGCGCGCACGCACGCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368676.8
ENST00000368679.8
ENST00000448723.2
CDS TCA 72 bp GAGTGCCCATCGTGCAGGTACACGTTGGCTGGGCAGTaGGGGCTGGCCCCTGTGCAGAACTCTGGGAGGTCA +
Preference number: 6 (lower is better)
Translates to: ECPSCRYTLAGQ*GLAPVQNSGRS
Trigger: TGACCTCCCAGAGTTCTGCACAGGGGCCAGCCCTCACTGCCCAGCCAACGTGTACCTGCACGATGGGCACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368676.8
ENST00000368679.8
ENST00000448723.2
ENST00000467145.1
ENST00000482291.1
CDS CCA 72 bp CCTCTCCTGATGCCGAGCTTGTGGCGGCCACGTACCTaGTCCCCAGAGCGTGACACACTGCTGCTCGTGAGT +
Preference number: 6 (lower is better)
Translates to: PLLMPSLWRPRT*SPERDTLLLVS
Trigger: ACTCACGAGCAGCAGTGTGTCACGCTCTGGGGACCAGGTACGTGGCCGCCACAAGCTCGGCATCAGGAGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482291.1
CDS CAA 90 bp TTGTGGAGCAGGTCTGAGGGGTGCCAGGCGGAGCCCAGTCTCCCATaGTCCTGGGGTCCTGGCCAAGGCATGAGTGAGCCGAGTTGTTCT +
Preference number: 6 (lower is better)
Translates to: LWSRSEGCQAEPSLP*SWGPGQGMSEPSCS
Trigger: AGAACAACTCGGCTCACTCATGCCTTGGCCAGGACCCCAGGACAATGGGAGACTGGGCTCCGCCTGGCACCCCTCAGACCTGCTCCACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368679.8
ENST00000448723.2
CDS TCA 72 bp GAGCTTGTGGCGGCCACGTACCTGGTCCCCAGAGCGTaGCACACTGCTGCTCGTGAGTCTGGCAGATGCCAT +
Preference number: 6 (lower is better)
Translates to: ELVAATYLVPRA*HTAARESGRCH
Trigger: ATGGCATCTGCCAGACTCACGAGCAGCAGTGTGTCACGCTCTGGGGACCAGGTACGTGGCCGCCACAAGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482291.1
CDS GCA 72 bp AGGCTTCAGCTGGCAGTCTTCACAGCACAGCCCATGTaGGCACACAGCGTCCGGCTTCAGGGTACAGGTGGT +
Preference number: 6 (lower is better)
Translates to: RLQLAVFTAQPM*AHSVRLQGTGG
Trigger: ACCACCTGTACCCTGAAGCCGGACGCTGTGTGCGCACATGGGCTGTGCTGTGAAGACTGCCAGCTGAAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368676.8
ENST00000368679.8
ENST00000448723.2
ENST00000467145.1
ENST00000482291.1
CDS GCA 72 bp TGGCCCCTGTGCAGAACTCTGGGAGGTCACAGGAGTTaGTGGAGTCCCTGCACGCTGTTCCTGCAGGCTTCA +
Preference number: 6 (lower is better)
Translates to: WPLCRTLGGHRS*WSPCTLFLQAS
Trigger: TGAAGCCTGCAGGAACAGCGTGCAGGGACTCCAGCAACTCCTGTGACCTCCCAGAGTTCTGCACAGGGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368676.8
ENST00000368679.8
ENST00000448723.2
ENST00000467145.1
ENST00000482291.1
CDS GCA 72 bp CTTGTAAGCAGTGGAGAGAGGGCCTCCGTGTTCTCTTaGCTAGGTGGAGGTGTAGCTGAGCTGGGAGCCCCC +
Preference number: 6 (lower is better)
Translates to: LVSSGERASVFS*LGGGVAELGAP
Trigger: GGGGGCTCCCAGCTCAGCTACACCTCCACCTAGGCAAGAGAACACGGAGGCCCTCTCTCCACTGCTTACAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494661.1
CDS CCA 72 bp CCCCTGTGCAGAACTCTGGGAGGTCACAGGAGTTGCTaGAGTCCCTGCACGCTGTTCCTGCAGGCTTCAGCT +
Preference number: 6 (lower is better)
Translates to: PLCRTLGGHRSC*SPCTLFLQASA
Trigger: AGCTGAAGCCTGCAGGAACAGCGTGCAGGGACTCCAGCAACTCCTGTGACCTCCCAGAGTTCTGCACAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368676.8
ENST00000368679.8
ENST00000448723.2
ENST00000467145.1
ENST00000482291.1
CDS CCA 72 bp CATCCTGACATGAGTGCCCATCGTGCAGGTACACGTTaGCTGGGCAGTGAGGGCTGGCCCCTGTGCAGAACT +
Preference number: 6 (lower is better)
Translates to: HPDMSAHRAGTR*LGSEGWPLCRT
Trigger: AGTTCTGCACAGGGGCCAGCCCTCACTGCCCAGCCAACGTGTACCTGCACGATGGGCACTCATGTCAGGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368676.8
ENST00000368679.8
ENST00000448723.2
ENST00000467145.1
ENST00000482291.1
CDS TCA 72 bp GTCTCCATGTCATGGGAGGGCTCAGATGAGTGTCAGTaGGGCAGTAGACGCATGCTCCTGCGATCCCACGGG +
Preference number: 6 (lower is better)
Translates to: VSMSWEGSDECQ*GSRRMLLRSHG
Trigger: CCCGTGGGATCGCAGGAGCATGCGTCTACTGCCTCACTGACACTCATCTGAGCCCTCCCATGACATGGAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368676.8
CDS TCA 72 bp CCAGTCTCCCATTGTCCTGGGGTCCTGGCCAAGGCATaGGTGAGCCGAGTTGTTCTGGCCAGAGGATCTGCA +
Preference number: 6 (lower is better)
Translates to: PVSHCPGVLAKA*VSRVVLARGSA
Trigger: TGCAGATCCTCTGGCCAGAACAACTCGGCTCACTCATGCCTTGGCCAGGACCCCAGGACAATGGGAGACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368679.8
ENST00000448723.2
CDS CAA 72 bp GTGCGCGCGCGCGCGCCGTTCTGGCACAAGCCAGCCTaGACCGTTGCAATAAATGAGCAAACTGTCCGAGTT +
Preference number: 6 (lower is better)
Translates to: VRARAPFWHKPA*TVAINEQTVRV
Trigger: AACTCGGACAGTTTGCTCATTTATTGCAACGGTCAAGGCTGGCTTGTGCCAGAACGGCGCGCGCGCGCGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368676.8
ENST00000368679.8
ENST00000448723.2
CDS TCA 72 bp CCAGGCTGGTCTCCAAGTCCTTCCTGCTGCAACTGCTaGACACCATGGGAAATGGGTACCCGGTGGAAGCGT +
Preference number: 6 (lower is better)
Translates to: PGWSPSPSCCNC*TPWEMGTRWKR
Trigger: ACGCTTCCACCGGGTACCCATTTCCCATGGTGTTCAGCAGTTGCAGCAGGAAGGACTTGGAGACCAGCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368676.8
ENST00000368679.8
ENST00000448723.2
CDS GCA 72 bp ACACAGCGTCCGGCTTCAGGGTACAGGTGGTGGCATTaGAGCAGCGATTCATACATTCCTCTGGCTCCCCAC +
Preference number: 6 (lower is better)
Translates to: TQRPASGYRWWH*SSDSYIPLAPH
Trigger: GTGGGGAGCCAGAGGAATGTATGAATCGCTGCTGCAATGCCACCACCTGTACCCTGAAGCCGGACGCTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368676.8
ENST00000368679.8
ENST00000448723.2
CDS GCA 72 bp ACGTGGGTCCCCCGGCACAGAATCCGGCCTCCTTGCTaGAGGGGGATGTTTGTTTCTATGGAAACGGCATTG +
Preference number: 6 (lower is better)
Translates to: TWVPRHRIRPPC*RGMFVSMETAL
Trigger: CAATGCCGTTTCCATAGAAACAAACATCCCCCTGCAGCAAGGAGGCCGGATTCTGTGCCGGGGGACCCACGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000368676.8
ENST00000368679.8
ENST00000448723.2
CDS GCA 72 bp TACACGTGGGTCCCCCGGCACAGAATCCGGCCTCCTTaGTGCAGGGGGATGTTTGTTTCTATGGAAACGGCA +
Preference number: 6 (lower is better)
Translates to: YTWVPRHRIRPP*CRGMFVSMETA
Trigger: TGCCGTTTCCATAGAAACAAACATCCCCCTGCAGCAAGGAGGCCGGATTCTGTGCCGGGGGACCCACGTGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000368676.8
ENST00000368679.8
ENST00000448723.2
CDS CCA 72 bp TCCATCTGCACACTTTGTGCCTGCAAGCACAAGCCCTaGGTCCGGCATGTCATCGCCCAAGTACACGTGGGT +
Preference number: 6 (lower is better)
Translates to: SICTLCACKHKP*VRHVIAQVHVG
Trigger: ACCCACGTGTACTTGGGCGATGACATGCCGGACCCAGGGCTTGTGCTTGCAGGCACAAAGTGTGCAGATGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368676.8
ENST00000368679.8
ENST00000448723.2
CDS CCA 72 bp AATATAGGCGGTGTGGGTGGATCTGGGCACTTGGTGTaGATATTGTGGAGCAGGTCTGAGGGGTGCCAGGCG +
Preference number: 6 (lower is better)
Translates to: NIGGVGGSGHLV*ILWSRSEGCQA
Trigger: CGCCTGGCACCCCTCAGACCTGCTCCACAATATCCACACCAAGTGCCCAGATCCACCCACACCGCCTATATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368679.8
ENST00000448723.2
CDS CAA 72 bp CACACAGCGTCCGGCTTCAGGGTACAGGTGGTGGCATaGCAGCAGCGATTCATACATTCCTCTGGCTCCCCA +
Preference number: 6 (lower is better)
Translates to: HTASGFRVQVVA*QQRFIHSSGSP
Trigger: TGGGGAGCCAGAGGAATGTATGAATCGCTGCTGCAATGCCACCACCTGTACCCTGAAGCCGGACGCTGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368676.8
ENST00000368679.8
ENST00000448723.2
CDS TCA 72 bp GATGCCATTGTAGCAGTAGCCGTCCACATCCTGACATaGGTGCCCATCGTGCAGGTACACGTTGGCTGGGCA +
Preference number: 6 (lower is better)
Translates to: DAIVAVAVHILT*VPIVQVHVGWA
Trigger: TGCCCAGCCAACGTGTACCTGCACGATGGGCACTCATGTCAGGATGTGGACGGCTACTGCTACAATGGCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368676.8
ENST00000368679.8
ENST00000448723.2
ENST00000467145.1
ENST00000482291.1
CDS CAA 72 bp AGCTCATGTGCCAGGGTCACGGCTGCACCAAGGGGATaGTCTGAATGGTCCATGACAATTCCCCCAGACTGG +
Preference number: 6 (lower is better)
Translates to: SSCARVTAAPRG*SEWSMTIPPDW
Trigger: CCAGTCTGGGGGAATTGTCATGGACCATTCAGACAATCCCCTTGGTGCAGCCGTGACCCTGGCACATGAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368676.8
ENST00000368679.8
ENST00000448723.2
CDS GCA 72 bp GTAGCTGAGCTGGGAGCCCCCATCACTCACTCTCAGTaGTTTAGCACGAGCAGGAAAAGACAGAGGTTGCCT +
Preference number: 6 (lower is better)
Translates to: VAELGAPITHSQ*FSTSRKRQRLP
Trigger: AGGCAACCTCTGTCTTTTCCTGCTCGTGCTAAAGCACTGAGAGTGAGTGATGGGGGCTCCCAGCTCAGCTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494661.1
CDS TCA 72 bp AGCAGGAAAAGACAGAGGTTGCCTGCAGTAGATGGCTaGAGACTAGAGCCGCCATGGTCATGGCCACTTACC +
Preference number: 6 (lower is better)
Translates to: SRKRQRLPAVDG*RLEPPWSWPLT
Trigger: GGTAAGTGGCCATGACCATGGCGGCTCTAGTCTTCAGCCATCTACTGCAGGCAACCTCTGTCTTTTCCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494661.1
CDS CCA 72 bp GGATTGTCTGAATGGTCCATGACAATTCCCCCAGACTaGTCTGCCGTGCACATGCTCATGATTGGGGCCATG +
Preference number: 6 (lower is better)
Translates to: GLSEWSMTIPPD*SAVHMLMIGAM
Trigger: CATGGCCCCAATCATGAGCATGTGCACGGCAGACCAGTCTGGGGGAATTGTCATGGACCATTCAGACAATCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368676.8
ENST00000368679.8
ENST00000448723.2
CDS CAA 72 bp CACACAGCGTCCGGCTTCAGGGTACAGGTGGTGGCATaGCAGCAGCGATTCATACATTCATACTTCCAGCGT +
Preference number: 6 (lower is better)
Translates to: HTASGFRVQVVA*QQRFIHSYFQR
Trigger: ACGCTGGAAGTATGAATGTATGAATCGCTGCTGCAATGCCACCACCTGTACCCTGAAGCCGGACGCTGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467145.1
CDS GCA 72 bp ACACAGCGTCCGGCTTCAGGGTACAGGTGGTGGCATTaGAGCAGCGATTCATACATTCATACTTCCAGCGTT +
Preference number: 6 (lower is better)
Translates to: TQRPASGYRWWH*SSDSYIHTSSV
Trigger: AACGCTGGAAGTATGAATGTATGAATCGCTGCTGCAATGCCACCACCTGTACCCTGAAGCCGGACGCTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467145.1
CDS GCA 72 bp AAAGACCAAGAGGGCCCAGCTCCTGAACTGCACACCTaGCTGTTTCCGTCTGTTAGGAAAGCAAAGCTTCTG +
Preference number: 6 (lower is better)
Translates to: KDQEGPAPELHT*LFPSVRKAKLL
Trigger: CAGAAGCTTTGCTTTCCTAACAGACGGAAACAGGCAGGTGTGCAGTTCAGGAGCTGGGCCCTCTTGGTCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482291.1
CDS CAA 90 bp CCCATGTCTGAGAGGGTGGTGGAAACACATTCTTTGCAGCGAGGTTaGGTGTGTTGTGATGTGATCCACATGATCCCCGGACGCTTTTCA +
Preference number: 6 (lower is better)
Translates to: PMSERVVETHSLQRG*VCCDVIHMIPGRFS
Trigger: TGAAAAGCGTCCGGGGATCATGTGGATCACATCACAACACACCAAACCTCGCTGCAAAGAATGTGTTTCCACCACCCTCTCAGACATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368676.8
ENST00000368679.8
ENST00000448723.2
CDS CAA 90 bp ACAGTGACCCGTGTAATTTCGAGCGAGGGAGACATCAGTACCGTCTaGCAGATAGTGGGTTTCCGTGAAACTGCTGGCAATGAGACCTTC +
Preference number: 6 (lower is better)
Translates to: TVTRVISSEGDISTV*QIVGFRETAGNETF
Trigger: GAAGGTCTCATTGCCAGCAGTTTCACGGAAACCCACTATCTGCAAGACGGTACTGATGTCTCCCTCGCTCGAAATTACACGGGTCACTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448723.2
CDS GCA 72 bp CTTCGAGACTTTGCCACAGTTGCCATAAGGATCACCTaGAGAATTGACTCTCTCAAAGCAGATCCCAGGGGC +
Preference number: 6 (lower is better)
Translates to: LRDFATVAIRIT*RIDSLKADPRG
Trigger: GCCCCTGGGATCTGCTTTGAGAGAGTCAATTCTGCAGGTGATCCTTATGGCAACTGTGGCAAAGTCTCGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368676.8
ENST00000368679.8
ENST00000448723.2
CDS CAA 72 bp GAGAGGGTGGTGGAAACACATTCTTTGCAGCGAGGTTaGGTGTGTTGTGATGTGATCCACATGATCCCCGGA +
Preference number: 6 (lower is better)
Translates to: ERVVETHSLQRG*VCCDVIHMIPG
Trigger: TCCGGGGATCATGTGGATCACATCACAACACACCAAACCTCGCTGCAAAGAATGTGTTTCCACCACCCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368676.8
ENST00000368679.8
ENST00000448723.2
CDS CAA 72 bp AGCGTTCATGATGCAGCCTCCTTTCTCAACCGCCATTaGACAGCTACAGCCCCTGTCCAGTGTGTCATGATT +
Preference number: 6 (lower is better)
Translates to: SVHDAASFLNRH*TATAPVQCVMI
Trigger: AATCATGACACACTGGACAGGGGCTGTAGCTGTCAAATGGCGGTTGAGAAAGGAGGCTGCATCATGAACGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368676.8
ENST00000368679.8
ENST00000448723.2
CDS CAA 90 bp TATGCCTTCTTGCCCATGTCTGAGAGGGTGGTGGAAACACATTCTTaGCAGCGAGGTTTGGTGTGTTGTGATGTGATCCACATGATCCCC +
Preference number: 6 (lower is better)
Translates to: YAFLPMSERVVETHS*QRGLVCCDVIHMIP
Trigger: GGGGATCATGTGGATCACATCACAACACACCAAACCTCGCTGCAAAGAATGTGTTTCCACCACCCTCTCAGACATGGGCAAGAAGGCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368676.8
ENST00000368679.8
ENST00000448723.2
CDS TCA 72 bp TCCCCTGAGACCAGAACACGTGCTGAGACTGACTGCTaGATCAGAATATCCCCGTACATGTCCATGGTAGTA +
Preference number: 6 (lower is better)
Translates to: SPETRTRAETDC*IRISPYMSMVV
Trigger: TACTACCATGGACATGTACGGGGATATTCTGATTCAGCAGTCAGTCTCAGCACGTGTTCTGGTCTCAGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368676.8
ENST00000368679.8
ENST00000448723.2
CDS TCA 72 bp GGAAACACATTCTTTGCAGCGAGGTTTGGTGTGTTGTaGTGTGATCCACATGATCCCCGGACGCTTTTCAGC +
Preference number: 6 (lower is better)
Translates to: GNTFFAARFGVL*CDPHDPRTLFS
Trigger: GCTGAAAAGCGTCCGGGGATCATGTGGATCACATCACAACACACCAAACCTCGCTGCAAAGAATGTGTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368676.8
ENST00000368679.8
ENST00000448723.2
CDS TCA 72 bp TTGAGGGTCTCTCTTTTATGCCTTCTTGCCCATGTCTaGGAGGGTGGTGGAAACACATTCTTTGCAGCGAGG +
Preference number: 6 (lower is better)
Translates to: LRVSLLCLLAHV*EGGGNTFFAAR
Trigger: CCTCGCTGCAAAGAATGTGTTTCCACCACCCTCTCAGACATGGGCAAGAAGGCATAAAAGAGAGACCCTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368676.8
ENST00000368679.8
ENST00000448723.2
CDS TCA 72 bp GCATTGGTACCAATGACTGGCCGGCTGGCACCTCCTTaGCACTGGATTTTTCCACATTTAGCATCTCTCATC +
Preference number: 6 (lower is better)
Translates to: ALVPMTGRLAPP*HWIFPHLASLI
Trigger: GATGAGAGATGCTAAATGTGGAAAAATCCAGTGTCAAGGAGGTGCCAGCCGGCCAGTCATTGGTACCAATGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368676.8
ENST00000368679.8
ENST00000448723.2
CDS TCA 72 bp GGATGTTTGTTTCTATGGAAACGGCATTGGTACCAATaGCTGGCCGGCTGGCACCTCCTTGACACTGGATTT +
Preference number: 6 (lower is better)
Translates to: GCLFLWKRHWYQ*LAGWHLLDTGF
Trigger: AAATCCAGTGTCAAGGAGGTGCCAGCCGGCCAGTCATTGGTACCAATGCCGTTTCCATAGAAACAAACATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368676.8
ENST00000368679.8
ENST00000448723.2
CDS CCA 72 bp GTTTGTTTCTATGGAAACGGCATTGGTACCAATGACTaGCCGGCTGGCACCTCCTTGACACTGGATTTTTCC +
Preference number: 6 (lower is better)
Translates to: VCFYGNGIGTND*PAGTSLTLDFS
Trigger: GGAAAAATCCAGTGTCAAGGAGGTGCCAGCCGGCCAGTCATTGGTACCAATGCCGTTTCCATAGAAACAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368676.8
ENST00000368679.8
ENST00000448723.2
CDS CAA 72 bp CGTGTAATTTCGAGCGAGGGAGACATCAGTACCGTCTaGCAGATAGTGGGTTTCCGTGAAACTGCTGGCAAT +
Preference number: 6 (lower is better)
Translates to: RVISSEGDISTV*QIVGFRETAGN
Trigger: ATTGCCAGCAGTTTCACGGAAACCCACTATCTGCAAGACGGTACTGATGTCTCCCTCGCTCGAAATTACACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368676.8
ENST00000368679.8
ENST00000448723.2
ENST00000494661.1
CDS CAA 72 bp TTGCCCATGTCTGAGAGGGTGGTGGAAACACATTCTTaGCAGCGAGGTTTGGTGTGTTGTGATGTGATCCAC +
Preference number: 6 (lower is better)
Translates to: LPMSERVVETHS*QRGLVCCDVIH
Trigger: GTGGATCACATCACAACACACCAAACCTCGCTGCAAAGAATGTGTTTCCACCACCCTCTCAGACATGGGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368676.8
ENST00000368679.8
ENST00000448723.2
CDS CAA 72 bp TCTGCCACGATCACCAGCTCCACATACTTAGTTGCCTaGAGGGTCTCTCTTTTATGCCTTCTTGCCCATGTC +
Preference number: 6 (lower is better)
Translates to: SATITSSTYLVA*RVSLLCLLAHV
Trigger: GACATGGGCAAGAAGGCATAAAAGAGAGACCCTCAAGGCAACTAAGTATGTGGAGCTGGTGATCGTGGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368676.8
ENST00000368679.8
ENST00000448723.2
CDS CAA 72 bp GGCATTGGTACCAATGACTGGCCGGCTGGCACCTCCTaGACACTGGATTTTTCCACATTTAGCATCTCTCAT +
Preference number: 6 (lower is better)
Translates to: GIGTNDWPAGTS*TLDFSTFSISH
Trigger: ATGAGAGATGCTAAATGTGGAAAAATCCAGTGTCAAGGAGGTGCCAGCCGGCCAGTCATTGGTACCAATGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368676.8
ENST00000368679.8
ENST00000448723.2
CDS CAA 90 bp CAGAATTACCGTGTAATTTCGAGCGAGGGAGACATCAGTACCGTCTaGCAGATAGTGGGTTTCCGTGAAACTGCTGGCAATGAGACCTTC +
Preference number: 6 (lower is better)
Translates to: QNYRVISSEGDISTV*QIVGFRETAGNETF
Trigger: GAAGGTCTCATTGCCAGCAGTTTCACGGAAACCCACTATCTGCAAGACGGTACTGATGTCTCCCTCGCTCGAAATTACACGGTAATTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368676.8
ENST00000368679.8
CDS CCA 72 bp CTCTCTTTTATGCCTTCTTGCCCATGTCTGAGAGGGTaGTGGAAACACATTCTTTGCAGCGAGGTTTGGTGT +
Preference number: 6 (lower is better)
Translates to: LSFMPSCPCLRG*WKHILCSEVWC
Trigger: ACACCAAACCTCGCTGCAAAGAATGTGTTTCCACCACCCTCTCAGACATGGGCAAGAAGGCATAAAAGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368676.8
ENST00000368679.8
ENST00000448723.2
CDS CCA 72 bp CAGGTGGTGGCATTGCAGCAGCGATTCATACATTCCTaGAAAGGGGAATGGCATTTGTTTGACAGGGTCTTA +
Preference number: 6 (lower is better)
Translates to: QVVALQQRFIHS*KGEWHLFDRVL
Trigger: TAAGACCCTGTCAAACAAATGCCATTCCCCTTTCCAGGAATGTATGAATCGCTGCTGCAATGCCACCACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482291.1
CDS CAA 72 bp GCAGCAGCGATTCATACATTCATACTTCCAGCGTTCTaGCAGAAACTGTCAGACCAAGCTCATTCCTCCTGG +
Preference number: 6 (lower is better)
Translates to: AAAIHTFILPAF*QKLSDQAHSSW
Trigger: CCAGGAGGAATGAGCTTGGTCTGACAGTTTCTGCAAGAACGCTGGAAGTATGAATGTATGAATCGCTGCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467145.1
CDS CAA 90 bp TATGGAAACGGCATTGGTACCAATGACTGGCCGGCTGGCACCTCCTaGACACTGGATTTTTCCACATTTAGCATCTCTCATCTCGCATTT +
Preference number: 6 (lower is better)
Translates to: YGNGIGTNDWPAGTS*TLDFSTFSISHLAF
Trigger: AAATGCGAGATGAGAGATGCTAAATGTGGAAAAATCCAGTGTCAAGGAGGTGCCAGCCGGCCAGTCATTGGTACCAATGCCGTTTCCATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368676.8
ENST00000368679.8
ENST00000448723.2
CDS TCA 72 bp TCATCTTCCTCCAGTCCAGAAATTCATGGAGGCTGGTaGATGGGTCCTGACTTACAGAGCATTTGTCCATGT +
Preference number: 6 (lower is better)
Translates to: SSSSSPEIHGGW*MGPDLQSICPC
Trigger: ACATGGACAAATGCTCTGTAAGTCAGGACCCATTCACCAGCCTCCATGAATTTCTGGACTGGAGGAAGATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368676.8
ENST00000368679.8
ENST00000448723.2
CDS TCA 72 bp TTACCTGAGACCAGAACACGTGCTGAGACTGACTGCTaGATCAGAATATCCCCGTACATGTCCATGGTAGTA +
Preference number: 6 (lower is better)
Translates to: LPETRTRAETDC*IRISPYMSMVV
Trigger: TACTACCATGGACATGTACGGGGATATTCTGATTCAGCAGTCAGTCTCAGCACGTGTTCTGGTCTCAGGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494661.1
CDS GCA 72 bp CAGCAGCGATTCATACATTCATACTTCCAGCGTTCTTaGAGAAACTGTCAGACCAAGCTCATTCCTCCTGGT +
Preference number: 6 (lower is better)
Translates to: QQRFIHSYFQRS*RNCQTKLIPPG
Trigger: ACCAGGAGGAATGAGCTTGGTCTGACAGTTTCTGCAAGAACGCTGGAAGTATGAATGTATGAATCGCTGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467145.1
CDS CCA 72 bp CTTCCTCCAGTCCAGAAATTCATGGAGGCTGGTGAATaGGTCCTGACTTACAGAGCATTTGTCCATGTCATT +
Preference number: 6 (lower is better)
Translates to: LPPVQKFMEAGE*VLTYRAFVHVI
Trigger: AATGACATGGACAAATGCTCTGTAAGTCAGGACCCATTCACCAGCCTCCATGAATTTCTGGACTGGAGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368676.8
ENST00000368679.8
ENST00000448723.2
CDS CAA 90 bp GCATTGCAGCAGCGATTCATACATTCCTGGAAAGGGGAATGGCATTaGTTTGACAGGGTCTTATGGAGTATGCACTCACTGAATGCAAAC +
Preference number: 6 (lower is better)
Translates to: ALQQRFIHSWKGEWH*FDRVLWSMHSLNAN
Trigger: GTTTGCATTCAGTGAGTGCATACTCCATAAGACCCTGTCAAACAAATGCCATTCCCCTTTCCAGGAATGTATGAATCGCTGCTGCAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482291.1
CDS CCA 72 bp CACTTCCACGCCTACCAACACGATCCGAATGTTCAGTaGTCTGTAAAACTTGTCAACGTGATTAGCAATCTC +
Preference number: 6 (lower is better)
Translates to: HFHAYQHDPNVQ*SVKLVNVISNL
Trigger: GAGATTGCTAATCACGTTGACAAGTTTTACAGACCACTGAACATTCGGATCGTGTTGGTAGGCGTGGAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368676.8
ENST00000368679.8
ENST00000448723.2
CDS CCA 72 bp TTGCAGCAGCGATTCATACATTCCTGGAAAGGGGAATaGCATTTGTTTGACAGGGTCTTATGGAGTATGCAC +
Preference number: 6 (lower is better)
Translates to: LQQRFIHSWKGE*HLFDRVLWSMH
Trigger: GTGCATACTCCATAAGACCCTGTCAAACAAATGCCATTCCCCTTTCCAGGAATGTATGAATCGCTGCTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482291.1
CDS CCA 72 bp CATCCCCAAGCCTACCAACACGATCCGAATGTTCAGTaGTCTGTAAAACTTGTCAACGTGATTAGCAATCTC +
Preference number: 6 (lower is better)
Translates to: HPQAYQHDPNVQ*SVKLVNVISNL
Trigger: GAGATTGCTAATCACGTTGACAAGTTTTACAGACCACTGAACATTCGGATCGTGTTGGTAGGCTTGGGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485388.2
CDS CAA 72 bp CAGCGATTCATACATTCCTGGAAAGGGGAATGGCATTaGTTTGACAGGGTCTTATGGAGTATGCACTCACTG +
Preference number: 6 (lower is better)
Translates to: QRFIHSWKGEWH*FDRVLWSMHSL
Trigger: CAGTGAGTGCATACTCCATAAGACCCTGTCAAACAAATGCCATTCCCCTTTCCAGGAATGTATGAATCGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482291.1
CDS TCA 72 bp AGCTCATTCCTCCTGGTATGGAAAACCTCAGAGACTTaGAGATGGGGATATGATGAACATTCTGTTTGCCAG +
Preference number: 6 (lower is better)
Translates to: SSFLLVWKTSET*RWGYDEHSVCQ
Trigger: CTGGCAAACAGAATGTTCATCATATCCCCATCTTCAAGTCTCTGAGGTTTTCCATACCAGGAGGAATGAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467145.1
CDS CCA 72 bp GATAAACCACAAATCCGGCAGCAAGAAGACACAGGATaGTCACCAGAATTCCTATGGTTAAACCTTGGTTAT +
Preference number: 6 (lower is better)
Translates to: DKPQIRQQEDTG*SPEFLWLNLGY
Trigger: ATAACCAAGGTTTAACCATAGGAATTCTGGTGACCATCCTGTGTCTTCTTGCTGCCGGATTTGTGGTTTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368679.8
ENST00000448723.2
CDS CCA 72 bp TACAGGCCTCAGGTCCCATTTGTCAGTGACAGCAATTaGTTAATGTTTTCAGAGTTAGGATTCTGGAATGTT +
Preference number: 6 (lower is better)
Translates to: YRPQVPFVSDSN*LMFSELGFWNV
Trigger: AACATTCCAGAATCCTAACTCTGAAAACATTAACCAATTGCTGTCACTGACAAATGGGACCTGAGGCCTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485388.2
CDS TCA 72 bp ATTTGTTTGACAGGGTCTTATGGAGTATGCACTCACTaGATGCAAACATCACACCTTAAATGGCTGCAAAAA +
Preference number: 6 (lower is better)
Translates to: ICLTGSYGVCTH*MQTSHLKWLQK
Trigger: TTTTTGCAGCCATTTAAGGTGTGATGTTTGCATTCAGTGAGTGCATACTCCATAAGACCCTGTCAAACAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482291.1
CDS CAA 72 bp AGACCTTCATTTCTTTCCAGATTTATGATCAGTTCTTaGCTTTCCCGTTGTAGTCGAATATTCAGCACTTCT +
Preference number: 6 (lower is better)
Translates to: RPSFLSRFMISS*LSRCSRIFSTS
Trigger: AGAAGTGCTGAATATTCGACTACAACGGGAAAGCAAAGAACTGATCATAAATCTGGAAAGAAATGAAGGTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368676.8
ENST00000368679.8
ENST00000448723.2